BLASTN 2.2.32+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 2UNEDS4J015 Database: Nucleotide collection (nt) 33,081,743 sequences; 106,026,924,574 total letters Query= clear sequence of Length=695 Score E Sequences producing significant alignments: (Bits) Value gb|GU672524.1| Polycirrus medusa voucher BIOUG:WS0178 cy... 1195 0.0 gb|GU672483.1| Polycirrus medusa voucher WS0223 cytochrome ox... 1191 0.0 gb|HM417790.1| Polycirrus sp. BOLD:AAI2761 voucher BIOUG... 955 0.0 ALIGNMENTS >gb|GU672524.1| Polycirrus medusa voucher BIOUG:WS0178 cytochrome oxidase subunit 1 (COI) gene, partial cds; mitochondrial Length=662 Score = 1195 bits (1324), Expect = 0.0 Identities = 662/662 (100%), Gaps = 0/662 (0%) Strand=Plus/Plus Query 34 GGCACCCTCTACTTTATTTTTGGCGTATGAGGAGGATTATTAGGAACCTCTATAAGACTA 93 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 GGCACCCTCTACTTTATTTTTGGCGTATGAGGAGGATTATTAGGAACCTCTATAAGACTA 60 Query 94 CTCATCCGAATTGAACTTGGCCAACCTGGTGCTTTTCTTGGAAGAGACCAATTATATAAC 153 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 CTCATCCGAATTGAACTTGGCCAACCTGGTGCTTTTCTTGGAAGAGACCAATTATATAAC 120 Query 154 ACTATTGTAACTGCTCACGGGCTACTTATAATCTTTTTTCTTGTTATACCTGTACTTATT 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 ACTATTGTAACTGCTCACGGGCTACTTATAATCTTTTTTCTTGTTATACCTGTACTTATT 180 Query 214 GGAGGTTTTGGAAACTGATTAATCCCACTTATATTAGGCGCACCAGACATAGCCTTCCCA 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 GGAGGTTTTGGAAACTGATTAATCCCACTTATATTAGGCGCACCAGACATAGCCTTCCCA 240 Query 274 CGAATAAACAATATAAGGTTTTGACTACTCCCTCCTGCACTACTTCTTCTCCTCGCTTCC 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 CGAATAAACAATATAAGGTTTTGACTACTCCCTCCTGCACTACTTCTTCTCCTCGCTTCC 300 Query 334 GCAGCAGTTGAAAAAGGAGTAGGAACTGGTTGGACTCTTTACCCCCCTTTAGCAAGAAAT 393 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 GCAGCAGTTGAAAAAGGAGTAGGAACTGGTTGGACTCTTTACCCCCCTTTAGCAAGAAAT 360 Query 394 CTAGCACATGCTGGACCCTCAGTAGACCTTGCTATTTTTTCACTACATTTAGCTGGTATT 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 CTAGCACATGCTGGACCCTCAGTAGACCTTGCTATTTTTTCACTACATTTAGCTGGTATT 420 Query 454 TCCTCAATTTTAGGAGCTATTAACTTTATCACAACAGTAGCAAATATACGATGAAAAGGA 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 421 TCCTCAATTTTAGGAGCTATTAACTTTATCACAACAGTAGCAAATATACGATGAAAAGGA 480 Query 514 CTACGTCTAGAACGAGTTCCTTTATTTGTTTGAGCTGTAGATATCACTGTTGTTCTACTA 573 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 481 CTACGTCTAGAACGAGTTCCTTTATTTGTTTGAGCTGTAGATATCACTGTTGTTCTACTA 540 Query 574 CTTTTATCCCTCCCTGTATTAGCCGGAGCAATTACTATATTATTAACAGACCGAAATGTT 633 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 541 CTTTTATCCCTCCCTGTATTAGCCGGAGCAATTACTATATTATTAACAGACCGAAATGTT 600 Query 634 AACACATCATTCTTTGACCCTAGAGGAGGAGGAGACCCAATTTTATATCAACACTTATTT 693 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 601 AACACATCATTCTTTGACCCTAGAGGAGGAGGAGACCCAATTTTATATCAACACTTATTT 660 Query 694 TG 695 || Sbjct 661 TG 662 >gb|GU672483.1| Polycirrus medusa voucher WS0223 cytochrome oxidase subunit 1 (COI) gene, partial cds; mitochondrial gb|GU672486.1| Polycirrus medusa voucher BIOUG:WS0218 cytochrome oxidase subunit 1 (COI) gene, partial cds; mitochondrial Length=660 Score = 1191 bits (1320), Expect = 0.0 Identities = 660/660 (100%), Gaps = 0/660 (0%) Strand=Plus/Plus Query 34 GGCACCCTCTACTTTATTTTTGGCGTATGAGGAGGATTATTAGGAACCTCTATAAGACTA 93 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 GGCACCCTCTACTTTATTTTTGGCGTATGAGGAGGATTATTAGGAACCTCTATAAGACTA 60 Query 94 CTCATCCGAATTGAACTTGGCCAACCTGGTGCTTTTCTTGGAAGAGACCAATTATATAAC 153 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 CTCATCCGAATTGAACTTGGCCAACCTGGTGCTTTTCTTGGAAGAGACCAATTATATAAC 120 Query 154 ACTATTGTAACTGCTCACGGGCTACTTATAATCTTTTTTCTTGTTATACCTGTACTTATT 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 ACTATTGTAACTGCTCACGGGCTACTTATAATCTTTTTTCTTGTTATACCTGTACTTATT 180 Query 214 GGAGGTTTTGGAAACTGATTAATCCCACTTATATTAGGCGCACCAGACATAGCCTTCCCA 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 GGAGGTTTTGGAAACTGATTAATCCCACTTATATTAGGCGCACCAGACATAGCCTTCCCA 240 Query 274 CGAATAAACAATATAAGGTTTTGACTACTCCCTCCTGCACTACTTCTTCTCCTCGCTTCC 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 CGAATAAACAATATAAGGTTTTGACTACTCCCTCCTGCACTACTTCTTCTCCTCGCTTCC 300 Query 334 GCAGCAGTTGAAAAAGGAGTAGGAACTGGTTGGACTCTTTACCCCCCTTTAGCAAGAAAT 393 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 GCAGCAGTTGAAAAAGGAGTAGGAACTGGTTGGACTCTTTACCCCCCTTTAGCAAGAAAT 360 Query 394 CTAGCACATGCTGGACCCTCAGTAGACCTTGCTATTTTTTCACTACATTTAGCTGGTATT 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 CTAGCACATGCTGGACCCTCAGTAGACCTTGCTATTTTTTCACTACATTTAGCTGGTATT 420 Query 454 TCCTCAATTTTAGGAGCTATTAACTTTATCACAACAGTAGCAAATATACGATGAAAAGGA 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 421 TCCTCAATTTTAGGAGCTATTAACTTTATCACAACAGTAGCAAATATACGATGAAAAGGA 480 Query 514 CTACGTCTAGAACGAGTTCCTTTATTTGTTTGAGCTGTAGATATCACTGTTGTTCTACTA 573 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 481 CTACGTCTAGAACGAGTTCCTTTATTTGTTTGAGCTGTAGATATCACTGTTGTTCTACTA 540 Query 574 CTTTTATCCCTCCCTGTATTAGCCGGAGCAATTACTATATTATTAACAGACCGAAATGTT 633 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 541 CTTTTATCCCTCCCTGTATTAGCCGGAGCAATTACTATATTATTAACAGACCGAAATGTT 600 Query 634 AACACATCATTCTTTGACCCTAGAGGAGGAGGAGACCCAATTTTATATCAACACTTATTT 693 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 601 AACACATCATTCTTTGACCCTAGAGGAGGAGGAGACCCAATTTTATATCAACACTTATTT 660 >gb|HM417790.1| Polycirrus sp. BOLD:AAI2761 voucher BIOUG:WS0106 cytochrome oxidase subunit 1 (COI) gene, partial cds; mitochondrial Length=662 Score = 955 bits (1058), Expect = 0.0 Identities = 609/662 (92%), Gaps = 0/662 (0%) Strand=Plus/Plus Query 34 GGCACCCTCTACTTTATTTTTGGCGTATGAGGAGGATTATTAGGAACCTCTATAAGACTA 93 || |||||||| ||||||||||| |||||||||||||| ||||||||||||||||| || Sbjct 1 GGTACCCTCTATTTTATTTTTGGGGTATGAGGAGGATTGTTAGGAACCTCTATAAGGCTC 60 Query 94 CTCATCCGAATTGAACTTGGCCAACCTGGTGCTTTTCTTGGAAGAGACCAATTATATAAC 153 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 CTCATCCGAATCGAACTTGGCCAACCTGGTGCTTTTCTTGGAAGAGACCAATTATATAAT 120 Query 154 ACTATTGTAACTGCTCACGGGCTACTTATAATCTTTTTTCTTGTTATACCTGTACTTATT 213 ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 121 ACTATTGTAACCGCTCATGGGCTACTTATAATCTTTTTTCTTGTTATACCTGTACTTATT 180 Query 214 GGAGGTTTTGGAAACTGATTAATCCCACTTATATTAGGCGCACCAGACATAGCCTTCCCA 273 |||||||||||||||||| ||||||| |||||| |||||||||||||||||||||| ||| Sbjct 181 GGAGGTTTTGGAAACTGACTAATCCCCCTTATACTAGGCGCACCAGACATAGCCTTTCCA 240 Query 274 CGAATAAACAATATAAGGTTTTGACTACTCCCTCCTGCACTACTTCTTCTCCTCGCTTCC 333 |||||||| |||||||| || || ||||||| |||||| ||||||||||||| || || Sbjct 241 CGAATAAATAATATAAGATTCTGGTTACTCCCCCCTGCATTACTTCTTCTCCTAGCCTCT 300 Query 334 GCAGCAGTTGAAAAAGGAGTAGGAACTGGTTGGACTCTTTACCCCCCTTTAGCAAGAAAT 393 ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||| Sbjct 301 GCAGCAGTTGAAAAAGGAGTAGGAACTGGTTGGACTCTTTATCCTCCATTAGCAAGAAAT 360 Query 394 CTAGCACATGCTGGACCCTCAGTAGACCTTGCTATTTTTTCACTACATTTAGCTGGTATT 453 |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| Sbjct 361 CTAGCACATGCTGGCCCCTCAGTAGATCTTGCTATTTTTTCACTACATTTAGCTGGTATC 420 Query 454 TCCTCAATTTTAGGAGCTATTAACTTTATCACAACAGTAGCAAATATACGATGAAAAGGA 513 || ||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||| Sbjct 421 TCTTCAATCCTAGGAGCTATTAACTTTATTACAACTGTAGCAAATATACGATGAAAAGGA 480 Query 514 CTACGTCTAGAACGAGTTCCTTTATTTGTTTGAGCTGTAGATATCACTGTTGTTCTACTA 573 |||| ||||||||||||||||||||||| |||||||||||||| |||||| |||||||| Sbjct 481 TTACGCCTAGAACGAGTTCCTTTATTTGTCTGAGCTGTAGATATTACTGTTATTCTACTA 540 Query 574 CTTTTATCCCTCCCTGTATTAGCCGGAGCAATTACTATATTATTAACAGACCGAAATGTT 633 ||| ||||||| ||||| ||||| |||||||| |||||| || ||||||||||||||||| Sbjct 541 CTTCTATCCCTTCCTGTCTTAGCTGGAGCAATCACTATACTACTAACAGACCGAAATGTT 600 Query 634 AACACATCATTCTTTGACCCTAGAGGAGGAGGAGACCCAATTTTATATCAACACTTATTT 693 || || ||||| |||||||| |||||||||||||||||||||||||| ||||| |||||| Sbjct 601 AATACCTCATTTTTTGACCCAAGAGGAGGAGGAGACCCAATTTTATACCAACATTTATTT 660 Query 694 TG 695 || Sbjct 661 TG 662 Database: Nucleotide collection (nt) Posted date: Oct 21, 2015 1:57 PM Number of letters in database: 106,026,924,574 Number of sequences in database: 33,081,743 Lambda K H 0.634 0.408 0.914 Gapped Lambda K H 0.625 0.410 0.780 Matrix: blastn matrix:2 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 33081743 Number of Hits to DB: 36598873 Number of extensions: 258827 Number of successful extensions: 258827 Number of sequences better than 10: 101749 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 161219 Number of HSP's successfully gapped: 148550 Length of query: 695 Length of database: 106026924574 Length adjustment: 37 Effective length of query: 658 Effective length of database: 104802900083 Effective search space: 68960308254614 Effective search space used: 68960308254614 A: 0 X1: 22 (20.1 bits) X2: 33 (29.8 bits) X3: 110 (99.2 bits) S1: 28 (26.5 bits) S2: 46 (42.8 bits)