BLASTN 2.2.32+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro
A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and
David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new
generation of protein database search programs", Nucleic
Acids Res. 25:3389-3402.


RID: 2UX4FJAW013


Database: Nucleotide collection (nt)
           33,081,743 sequences; 106,026,924,574 total letters
Query= clear sequence from WSV23_COI_F_A01_WSBS-Seq-1-08-15

Length=695


                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gb|HQ024527.1|  Polycirrus sp. CMC04 voucher BIOUG<CAN>:HLC-30...  22.9    2.5  
gb|HQ024526.1|  Polycirrus sp. CMC01 28S ribosomal RNA gene, p...  22.9    2.5  
gb|HQ025075.1|  Polycirrus eximius 28S ribosomal RNA gene, par...  22.9    2.5  
gb|HM473263.1|  Polycirrus sp. CMC05 28S ribosomal RNA gene, p...  22.9    2.5  
gb|HM473262.1|  Polycirrus sp. CMC03 voucher BIOUG<CAN>:BAMPOL...  22.9    2.5  
gb|HM473261.1|  Polycirrus sp. CMC02 voucher BIOUG<CAN>:BAMPOL...  22.9    2.5  
gb|EU418866.1|  Polycirrus sp. THS-2008 28S ribosomal RNA gene...  22.9    2.5  

ALIGNMENTS
>gb|HQ024527.1| Polycirrus sp. CMC04 voucher BIOUG<CAN>:HLC-30488 28S ribosomal 
RNA gene, partial sequence
Length=757

 Score = 22.9 bits (24),  Expect = 2.5
 Identities = 12/12 (100%), Gaps = 0/12 (0%)
 Strand=Plus/Plus

Query  570  ACTACTTTTATC  581
            ||||||||||||
Sbjct  262  ACTACTTTTATC  273


>gb|HQ024526.1| Polycirrus sp. CMC01 28S ribosomal RNA gene, partial sequence
Length=757

 Score = 22.9 bits (24),  Expect = 2.5
 Identities = 12/12 (100%), Gaps = 0/12 (0%)
 Strand=Plus/Plus

Query  570  ACTACTTTTATC  581
            ||||||||||||
Sbjct  262  ACTACTTTTATC  273


>gb|HQ025075.1| Polycirrus eximius 28S ribosomal RNA gene, partial sequence
Length=757

 Score = 22.9 bits (24),  Expect = 2.5
 Identities = 12/12 (100%), Gaps = 0/12 (0%)
 Strand=Plus/Plus

Query  570  ACTACTTTTATC  581
            ||||||||||||
Sbjct  262  ACTACTTTTATC  273


>gb|HM473263.1| Polycirrus sp. CMC05 28S ribosomal RNA gene, partial sequence
Length=757

 Score = 22.9 bits (24),  Expect = 2.5
 Identities = 12/12 (100%), Gaps = 0/12 (0%)
 Strand=Plus/Plus

Query  570  ACTACTTTTATC  581
            ||||||||||||
Sbjct  262  ACTACTTTTATC  273


>gb|HM473262.1| Polycirrus sp. CMC03 voucher BIOUG<CAN>:BAMPOL0118 28S ribosomal 
RNA gene, partial sequence
Length=757

 Score = 22.9 bits (24),  Expect = 2.5
 Identities = 12/12 (100%), Gaps = 0/12 (0%)
 Strand=Plus/Plus

Query  570  ACTACTTTTATC  581
            ||||||||||||
Sbjct  262  ACTACTTTTATC  273


>gb|HM473261.1| Polycirrus sp. CMC02 voucher BIOUG<CAN>:BAMPOL0337 28S ribosomal 
RNA gene, partial sequence
Length=757

 Score = 22.9 bits (24),  Expect = 2.5
 Identities = 12/12 (100%), Gaps = 0/12 (0%)
 Strand=Plus/Plus

Query  570  ACTACTTTTATC  581
            ||||||||||||
Sbjct  262  ACTACTTTTATC  273


>gb|EU418866.1| Polycirrus sp. THS-2008 28S ribosomal RNA gene, partial sequence
 gb|JN936481.1| Polycirrus cf. eximius THS-2012 28S ribosomal RNA gene, partial 
sequence
Length=3294

 Score = 22.9 bits (24),  Expect = 2.5
 Identities = 12/12 (100%), Gaps = 0/12 (0%)
 Strand=Plus/Plus

Query  489   AGTAGCAAATAT  500
             ||||||||||||
Sbjct  1637  AGTAGCAAATAT  1648


 Score = 22.9 bits (24),  Expect = 2.5
 Identities = 12/12 (100%), Gaps = 0/12 (0%)
 Strand=Plus/Plus

Query  570   ACTACTTTTATC  581
             ||||||||||||
Sbjct  2733  ACTACTTTTATC  2744


 Score = 21.1 bits (22),  Expect = 8.7
 Identities = 11/11 (100%), Gaps = 0/11 (0%)
 Strand=Plus/Plus

Query  335   CAGCAGTTGAA  345
             |||||||||||
Sbjct  1696  CAGCAGTTGAA  1706


  Database: Nucleotide collection (nt)
    Posted date:  Oct 21, 2015  1:57 PM
  Number of letters in database: 30,074
  Number of sequences in database:  39

Lambda      K        H
   0.634    0.408    0.914 
Gapped
Lambda      K        H
   0.625    0.410    0.780 
Matrix: blastn matrix:2 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 39
Number of Hits to DB: 530
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10: 5
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 5
Length of query: 695
Length of database: 30074
Length adjustment: 18
Effective length of query: 677
Effective length of database: 29372
Effective search space: 19884844
Effective search space used: 19884844
A: 0
X1: 22 (20.1 bits)
X2: 33 (29.8 bits)
X3: 110 (99.2 bits)
S1: 22 (21.1 bits)
S2: 22 (21.1 bits)