******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.5.1 (Release date: Sun Jan 29 10:33:12 2023 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= housekeeping.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ KOJLAKLA_00016 1.0000 100 KOJLAKLA_00023 1.0000 100 KOJLAKLA_00061 1.0000 100 KOJLAKLA_00077 1.0000 100 KOJLAKLA_00080 1.0000 100 KOJLAKLA_00111 1.0000 100 KOJLAKLA_00141 1.0000 100 KOJLAKLA_00165 1.0000 100 KOJLAKLA_00166 1.0000 100 KOJLAKLA_00181 1.0000 100 KOJLAKLA_00186 1.0000 100 KOJLAKLA_00204 1.0000 100 KOJLAKLA_00211 1.0000 100 KOJLAKLA_00255 1.0000 100 KOJLAKLA_00271 1.0000 100 KOJLAKLA_00295 1.0000 100 KOJLAKLA_00301 1.0000 100 KOJLAKLA_00304 1.0000 100 KOJLAKLA_00319 1.0000 100 KOJLAKLA_00320 1.0000 100 KOJLAKLA_00326 1.0000 100 KOJLAKLA_00348 1.0000 100 KOJLAKLA_00353 1.0000 100 KOJLAKLA_00373 1.0000 100 KOJLAKLA_00380 1.0000 100 KOJLAKLA_00387 1.0000 100 KOJLAKLA_00388 1.0000 100 KOJLAKLA_00390 1.0000 100 KOJLAKLA_00434 1.0000 100 KOJLAKLA_00450 1.0000 100 KOJLAKLA_00455 1.0000 100 KOJLAKLA_00458 1.0000 100 KOJLAKLA_00490 1.0000 100 KOJLAKLA_00506 1.0000 100 KOJLAKLA_00512 1.0000 100 KOJLAKLA_00535 1.0000 100 KOJLAKLA_00553 1.0000 100 KOJLAKLA_00555 1.0000 100 KOJLAKLA_00615 1.0000 100 KOJLAKLA_00633 1.0000 100 KOJLAKLA_00640 1.0000 100 KOJLAKLA_00658 1.0000 100 KOJLAKLA_00669 1.0000 100 KOJLAKLA_00702 1.0000 100 KOJLAKLA_00752 1.0000 100 KOJLAKLA_00799 1.0000 100 KOJLAKLA_00873 1.0000 100 KOJLAKLA_00894 1.0000 100 KOJLAKLA_00914 1.0000 100 KOJLAKLA_00921 1.0000 100 KOJLAKLA_00933 1.0000 100 KOJLAKLA_00971 1.0000 100 KOJLAKLA_00976 1.0000 100 KOJLAKLA_00996 1.0000 100 KOJLAKLA_01067 1.0000 100 KOJLAKLA_01068 1.0000 100 KOJLAKLA_01179 1.0000 100 KOJLAKLA_01180 1.0000 100 KOJLAKLA_01252 1.0000 100 KOJLAKLA_01255 1.0000 100 KOJLAKLA_01324 1.0000 100 KOJLAKLA_01334 1.0000 100 KOJLAKLA_01354 1.0000 100 KOJLAKLA_01370 1.0000 100 KOJLAKLA_01423 1.0000 100 KOJLAKLA_01445 1.0000 100 KOJLAKLA_01455 1.0000 100 KOJLAKLA_01467 1.0000 100 KOJLAKLA_01470 1.0000 100 KOJLAKLA_01475 1.0000 100 KOJLAKLA_01630 1.0000 100 KOJLAKLA_01644 1.0000 100 KOJLAKLA_01645 1.0000 100 KOJLAKLA_01648 1.0000 100 KOJLAKLA_01671 1.0000 100 KOJLAKLA_01734 1.0000 100 KOJLAKLA_01803 1.0000 100 KOJLAKLA_01811 1.0000 100 KOJLAKLA_01820 1.0000 100 KOJLAKLA_01822 1.0000 100 KOJLAKLA_01828 1.0000 100 KOJLAKLA_01842 1.0000 100 KOJLAKLA_01846 1.0000 100 KOJLAKLA_01849 1.0000 100 KOJLAKLA_01865 1.0000 100 KOJLAKLA_01868 1.0000 100 KOJLAKLA_01876 1.0000 100 KOJLAKLA_01889 1.0000 100 KOJLAKLA_01907 1.0000 100 KOJLAKLA_01993 1.0000 100 KOJLAKLA_01997 1.0000 100 KOJLAKLA_02003 1.0000 100 KOJLAKLA_02008 1.0000 100 KOJLAKLA_02019 1.0000 100 KOJLAKLA_02087 1.0000 100 KOJLAKLA_02101 1.0000 100 KOJLAKLA_02106 1.0000 100 KOJLAKLA_02112 1.0000 100 KOJLAKLA_02119 1.0000 100 KOJLAKLA_02263 1.0000 100 KOJLAKLA_02273 1.0000 100 KOJLAKLA_02274 1.0000 100 KOJLAKLA_02299 1.0000 100 KOJLAKLA_02301 1.0000 100 KOJLAKLA_02325 1.0000 100 KOJLAKLA_02332 1.0000 100 KOJLAKLA_02335 1.0000 100 KOJLAKLA_02342 1.0000 100 KOJLAKLA_02343 1.0000 100 KOJLAKLA_02400 1.0000 100 KOJLAKLA_02401 1.0000 100 KOJLAKLA_02402 1.0000 100 KOJLAKLA_02458 1.0000 100 KOJLAKLA_02486 1.0000 100 KOJLAKLA_02496 1.0000 100 KOJLAKLA_02514 1.0000 100 KOJLAKLA_02531 1.0000 100 KOJLAKLA_02543 1.0000 100 KOJLAKLA_02641 1.0000 100 KOJLAKLA_02743 1.0000 100 KOJLAKLA_02763 1.0000 100 KOJLAKLA_02764 1.0000 100 KOJLAKLA_02797 1.0000 100 KOJLAKLA_02867 1.0000 100 KOJLAKLA_02878 1.0000 100 KOJLAKLA_02987 1.0000 100 KOJLAKLA_03006 1.0000 100 KOJLAKLA_03017 1.0000 100 KOJLAKLA_03023 1.0000 100 KOJLAKLA_03038 1.0000 100 KOJLAKLA_03052 1.0000 100 KOJLAKLA_03099 1.0000 100 KOJLAKLA_03109 1.0000 100 KOJLAKLA_03114 1.0000 100 KOJLAKLA_03152 1.0000 100 KOJLAKLA_03223 1.0000 100 KOJLAKLA_03267 1.0000 100 KOJLAKLA_03285 1.0000 100 KOJLAKLA_03342 1.0000 100 KOJLAKLA_03387 1.0000 100 KOJLAKLA_03391 1.0000 100 KOJLAKLA_03393 1.0000 100 KOJLAKLA_03407 1.0000 100 KOJLAKLA_03418 1.0000 100 KOJLAKLA_03430 1.0000 100 KOJLAKLA_03434 1.0000 100 KOJLAKLA_03459 1.0000 100 KOJLAKLA_03462 1.0000 100 KOJLAKLA_03498 1.0000 100 KOJLAKLA_03504 1.0000 100 KOJLAKLA_03516 1.0000 100 KOJLAKLA_03519 1.0000 100 KOJLAKLA_03525 1.0000 100 KOJLAKLA_03537 1.0000 100 KOJLAKLA_03561 1.0000 100 KOJLAKLA_03563 1.0000 100 KOJLAKLA_03568 1.0000 100 KOJLAKLA_03585 1.0000 100 KOJLAKLA_03593 1.0000 100 KOJLAKLA_03594 1.0000 100 KOJLAKLA_03664 1.0000 100 KOJLAKLA_03667 1.0000 100 KOJLAKLA_03697 1.0000 100 KOJLAKLA_03699 1.0000 100 KOJLAKLA_03748 1.0000 100 KOJLAKLA_03792 1.0000 100 KOJLAKLA_03798 1.0000 100 KOJLAKLA_03811 1.0000 100 KOJLAKLA_03827 1.0000 100 KOJLAKLA_03828 1.0000 100 KOJLAKLA_03905 1.0000 100 KOJLAKLA_03931 1.0000 100 KOJLAKLA_03935 1.0000 100 KOJLAKLA_03940 1.0000 100 KOJLAKLA_03942 1.0000 100 KOJLAKLA_03946 1.0000 100 KOJLAKLA_03950 1.0000 100 KOJLAKLA_03957 1.0000 100 KOJLAKLA_03969 1.0000 100 KOJLAKLA_03980 1.0000 100 KOJLAKLA_03986 1.0000 100 KOJLAKLA_03991 1.0000 100 KOJLAKLA_04002 1.0000 100 KOJLAKLA_04042 1.0000 100 KOJLAKLA_04045 1.0000 100 KOJLAKLA_04046 1.0000 100 KOJLAKLA_04058 1.0000 100 KOJLAKLA_04062 1.0000 100 KOJLAKLA_04063 1.0000 100 KOJLAKLA_04065 1.0000 100 KOJLAKLA_04067 1.0000 100 KOJLAKLA_04079 1.0000 100 KOJLAKLA_04093 1.0000 100 KOJLAKLA_04097 1.0000 100 KOJLAKLA_04101 1.0000 100 KOJLAKLA_04102 1.0000 100 KOJLAKLA_04114 1.0000 100 KOJLAKLA_04128 1.0000 100 KOJLAKLA_04130 1.0000 100 KOJLAKLA_04133 1.0000 100 KOJLAKLA_04160 1.0000 100 KOJLAKLA_04162 1.0000 100 KOJLAKLA_04163 1.0000 100 KOJLAKLA_04164 1.0000 100 KOJLAKLA_04165 1.0000 100 KOJLAKLA_04166 1.0000 100 KOJLAKLA_04167 1.0000 100 KOJLAKLA_04169 1.0000 100 KOJLAKLA_04170 1.0000 100 KOJLAKLA_04171 1.0000 100 KOJLAKLA_04172 1.0000 100 KOJLAKLA_04173 1.0000 100 KOJLAKLA_04174 1.0000 100 KOJLAKLA_04175 1.0000 100 KOJLAKLA_04176 1.0000 100 KOJLAKLA_04177 1.0000 100 KOJLAKLA_04178 1.0000 100 KOJLAKLA_04179 1.0000 100 KOJLAKLA_04180 1.0000 100 KOJLAKLA_04181 1.0000 100 KOJLAKLA_04182 1.0000 100 KOJLAKLA_04183 1.0000 100 KOJLAKLA_04184 1.0000 100 KOJLAKLA_04185 1.0000 100 KOJLAKLA_04186 1.0000 100 KOJLAKLA_04187 1.0000 100 KOJLAKLA_04188 1.0000 100 KOJLAKLA_04189 1.0000 100 KOJLAKLA_04193 1.0000 100 KOJLAKLA_04194 1.0000 100 KOJLAKLA_04195 1.0000 100 KOJLAKLA_04196 1.0000 100 KOJLAKLA_04230 1.0000 100 KOJLAKLA_04253 1.0000 100 KOJLAKLA_04254 1.0000 100 KOJLAKLA_04265 1.0000 100 KOJLAKLA_04270 1.0000 100 KOJLAKLA_04271 1.0000 100 KOJLAKLA_04291 1.0000 100 KOJLAKLA_04314 1.0000 100 KOJLAKLA_04352 1.0000 100 KOJLAKLA_04353 1.0000 100 KOJLAKLA_04379 1.0000 100 KOJLAKLA_04408 1.0000 100 KOJLAKLA_04451 1.0000 100 KOJLAKLA_04474 1.0000 100 KOJLAKLA_04480 1.0000 100 KOJLAKLA_04489 1.0000 100 KOJLAKLA_04495 1.0000 100 KOJLAKLA_04524 1.0000 100 KOJLAKLA_04525 1.0000 100 KOJLAKLA_04529 1.0000 100 KOJLAKLA_04537 1.0000 100 KOJLAKLA_04605 1.0000 100 KOJLAKLA_04631 1.0000 100 KOJLAKLA_04643 1.0000 100 KOJLAKLA_04654 1.0000 100 KOJLAKLA_04676 1.0000 100 KOJLAKLA_04677 1.0000 100 KOJLAKLA_04678 1.0000 100 KOJLAKLA_04679 1.0000 100 KOJLAKLA_04680 1.0000 100 KOJLAKLA_04681 1.0000 100 KOJLAKLA_04682 1.0000 100 KOJLAKLA_04683 1.0000 100 KOJLAKLA_04684 1.0000 100 KOJLAKLA_04688 1.0000 100 KOJLAKLA_04698 1.0000 100 KOJLAKLA_04700 1.0000 100 KOJLAKLA_04705 1.0000 100 KOJLAKLA_04714 1.0000 100 KOJLAKLA_04722 1.0000 100 KOJLAKLA_04772 1.0000 100 KOJLAKLA_04784 1.0000 100 KOJLAKLA_04804 1.0000 100 KOJLAKLA_04813 1.0000 100 KOJLAKLA_04826 1.0000 100 KOJLAKLA_04843 1.0000 100 KOJLAKLA_04884 1.0000 100 KOJLAKLA_04886 1.0000 100 KOJLAKLA_04892 1.0000 100 KOJLAKLA_04915 1.0000 100 KOJLAKLA_04919 1.0000 100 KOJLAKLA_04933 1.0000 100 KOJLAKLA_04935 1.0000 100 KOJLAKLA_04936 1.0000 100 KOJLAKLA_04937 1.0000 100 KOJLAKLA_04938 1.0000 100 KOJLAKLA_04939 1.0000 100 KOJLAKLA_04940 1.0000 100 KOJLAKLA_04941 1.0000 100 KOJLAKLA_04970 1.0000 100 KOJLAKLA_04976 1.0000 100 KOJLAKLA_05034 1.0000 100 KOJLAKLA_05056 1.0000 100 KOJLAKLA_05076 1.0000 100 KOJLAKLA_05118 1.0000 100 KOJLAKLA_05164 1.0000 100 KOJLAKLA_05195 1.0000 100 KOJLAKLA_05208 1.0000 100 KOJLAKLA_05217 1.0000 100 KOJLAKLA_05219 1.0000 100 KOJLAKLA_05220 1.0000 100 KOJLAKLA_05230 1.0000 100 KOJLAKLA_05234 1.0000 100 KOJLAKLA_05257 1.0000 100 KOJLAKLA_05259 1.0000 100 KOJLAKLA_05262 1.0000 100 KOJLAKLA_05264 1.0000 100 KOJLAKLA_05272 1.0000 100 KOJLAKLA_05288 1.0000 100 KOJLAKLA_05318 1.0000 100 KOJLAKLA_05322 1.0000 100 KOJLAKLA_05338 1.0000 100 KOJLAKLA_05354 1.0000 100 KOJLAKLA_05368 1.0000 100 KOJLAKLA_05383 1.0000 100 KOJLAKLA_05388 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme housekeeping.fasta -dna -nmotifs 3 -minw 6 -text model: mod= zoops nmotifs= 3 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 6 maxw= 50 nsites: minsites= 2 maxsites= 318 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 31800 N= 318 sample: seed= 0 hsfrac= 0 searchsize= 31800 norand= no csites= 1000 Letter frequencies in dataset: A 0.276 C 0.221 G 0.212 T 0.291 Background letter frequencies (from file dataset with add-one prior applied): A 0.276 C 0.221 G 0.212 T 0.291 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF CWGGCGGCKTT MEME-1 width = 11 sites = 13 llr = 150 E-value = 1.8e+001 ******************************************************************************** -------------------------------------------------------------------------------- Motif CWGGCGGCKTT MEME-1 Description -------------------------------------------------------------------------------- Simplified A :5::22:::2: pos.-specific C 9:::81:8:1: probability G 1:aa:6a26:: matrix T :5:::2::48a bits 2.2 ** * 2.0 ** * 1.8 * ** * * 1.6 * *** ** * Relative 1.3 * *** ** * Entropy 1.1 * *** *** * (16.7 bits) 0.9 ***** ***** 0.7 ***** ***** 0.4 *********** 0.2 *********** 0.0 ----------- Multilevel CTGGCGGCGTT consensus A T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CWGGCGGCKTT MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- ----------- KOJLAKLA_04164 42 5.27e-07 TTGCCAACAG CAGGCGGCTTT TTTGCGGCGC KOJLAKLA_03969 13 5.27e-07 GCCGCCTTCT CAGGCGGCTTT TTCATCACTG KOJLAKLA_01997 58 5.27e-07 AGCCGCCAGC CAGGCGGCTTT TTTAACAACT KOJLAKLA_05368 19 6.35e-07 TCAATTGATA CTGGCGGCGAT TATAGCCATA KOJLAKLA_04130 37 1.69e-06 CAGCGAACAG CTGGAGGCGTT GGAGGCATAC KOJLAKLA_00535 81 1.91e-06 TAACAAAGCA CAGGAGGCGTT GCGCGAACG KOJLAKLA_04489 15 2.11e-06 CAAAGGTCCG CAGGCGGCGCT GGCACAGATT KOJLAKLA_02263 44 2.11e-06 GACCGTCGAA CTGGCCGCGTT ATTACCCCCT KOJLAKLA_04045 7 3.38e-06 TCCCAA CTGGCTGCTTT TTCGGCCTCG KOJLAKLA_02343 16 3.38e-06 GAGTTAATTT GTGGCGGCGTT TCACATCCCT KOJLAKLA_04605 4 6.24e-06 GAA CTGGCTGGGTT TCGTGAAATT KOJLAKLA_02019 63 6.24e-06 TTCTGCCATG CAGGCAGGGTT GGACAGAAAA KOJLAKLA_01803 56 8.90e-06 TTGAAGGCGT CTGGCAGCTAT GGGAACAGCC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CWGGCGGCKTT MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- KOJLAKLA_04164 5.3e-07 41_[+1]_48 KOJLAKLA_03969 5.3e-07 12_[+1]_77 KOJLAKLA_01997 5.3e-07 57_[+1]_32 KOJLAKLA_05368 6.3e-07 18_[+1]_71 KOJLAKLA_04130 1.7e-06 36_[+1]_53 KOJLAKLA_00535 1.9e-06 80_[+1]_9 KOJLAKLA_04489 2.1e-06 14_[+1]_75 KOJLAKLA_02263 2.1e-06 43_[+1]_46 KOJLAKLA_04045 3.4e-06 6_[+1]_83 KOJLAKLA_02343 3.4e-06 15_[+1]_74 KOJLAKLA_04605 6.2e-06 3_[+1]_86 KOJLAKLA_02019 6.2e-06 62_[+1]_27 KOJLAKLA_01803 8.9e-06 55_[+1]_34 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CWGGCGGCKTT MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CWGGCGGCKTT width=11 seqs=13 KOJLAKLA_04164 ( 42) CAGGCGGCTTT 1 KOJLAKLA_03969 ( 13) CAGGCGGCTTT 1 KOJLAKLA_01997 ( 58) CAGGCGGCTTT 1 KOJLAKLA_05368 ( 19) CTGGCGGCGAT 1 KOJLAKLA_04130 ( 37) CTGGAGGCGTT 1 KOJLAKLA_00535 ( 81) CAGGAGGCGTT 1 KOJLAKLA_04489 ( 15) CAGGCGGCGCT 1 KOJLAKLA_02263 ( 44) CTGGCCGCGTT 1 KOJLAKLA_04045 ( 7) CTGGCTGCTTT 1 KOJLAKLA_02343 ( 16) GTGGCGGCGTT 1 KOJLAKLA_04605 ( 4) CTGGCTGGGTT 1 KOJLAKLA_02019 ( 63) CAGGCAGGGTT 1 KOJLAKLA_01803 ( 56) CTGGCAGCTAT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CWGGCGGCKTT MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 11 n= 28620 bayes= 12.2684 E= 1.8e+001 -1035 206 -146 -1035 74 -1035 -1035 89 -1035 -1035 224 -1035 -1035 -1035 224 -1035 -84 194 -1035 -1035 -84 -152 154 -92 -1035 -1035 224 -1035 -1035 194 -46 -1035 -1035 -1035 154 40 -84 -152 -1035 140 -1035 -1035 -1035 178 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CWGGCGGCKTT MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 11 nsites= 13 E= 1.8e+001 0.000000 0.923077 0.076923 0.000000 0.461538 0.000000 0.000000 0.538462 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.153846 0.846154 0.000000 0.000000 0.153846 0.076923 0.615385 0.153846 0.000000 0.000000 1.000000 0.000000 0.000000 0.846154 0.153846 0.000000 0.000000 0.000000 0.615385 0.384615 0.153846 0.076923 0.000000 0.769231 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CWGGCGGCKTT MEME-1 regular expression -------------------------------------------------------------------------------- C[TA]GGCGGC[GT]TT -------------------------------------------------------------------------------- Time 43.95 secs. ******************************************************************************** ******************************************************************************** MOTIF GCCAKAAAAABGGCG MEME-2 width = 15 sites = 7 llr = 107 E-value = 5.6e+002 ******************************************************************************** -------------------------------------------------------------------------------- Motif GCCAKAAAAABGGCG MEME-2 Description -------------------------------------------------------------------------------- Simplified A :::71aa9aa::3:: pos.-specific C 177:::::::3::a: probability G 9:::4::1::397:a matrix T :3334:::::41::: bits 2.2 ** 2.0 ** 1.8 ** ** ** 1.6 * ** ** * ** Relative 1.3 * ***** **** Entropy 1.1 *** ***** **** (22.0 bits) 0.9 **** ***** **** 0.7 **** ***** **** 0.4 *************** 0.2 *************** 0.0 --------------- Multilevel GCCAGAAAAATGGCG consensus TTTT C A sequence G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCCAKAAAAABGGCG MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- --------------- KOJLAKLA_03504 36 1.12e-08 AAGGGTCGAA GCCAGAAAAAGGACG ACTAAGTAAA KOJLAKLA_04683 7 2.72e-08 ATTTCC GCCATAAGAACGGCG ACTAGCAATG KOJLAKLA_05259 68 2.97e-08 ATATTACTCG GTCTGAAAAATGGCG ACATTATTTC KOJLAKLA_03342 54 2.97e-08 CTATCTGATG GCCAGAAAAATTGCG TGAGAAGGAT KOJLAKLA_03957 62 5.66e-08 TATTTCTTAT GCTAAAAAAATGGCG ACAAGTAGCA KOJLAKLA_03285 67 7.28e-08 TCTTGAATTC GCCTTAAAAACGACG GTCGGGTCCT KOJLAKLA_03568 20 2.92e-07 GGCCAGTGGA CTTATAAAAAGGGCG GCTAACGCGT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCCAKAAAAABGGCG MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- KOJLAKLA_03504 1.1e-08 35_[+2]_50 KOJLAKLA_04683 2.7e-08 6_[+2]_79 KOJLAKLA_05259 3e-08 67_[+2]_18 KOJLAKLA_03342 3e-08 53_[+2]_32 KOJLAKLA_03957 5.7e-08 61_[+2]_24 KOJLAKLA_03285 7.3e-08 66_[+2]_19 KOJLAKLA_03568 2.9e-07 19_[+2]_66 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCCAKAAAAABGGCG MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GCCAKAAAAABGGCG width=15 seqs=7 KOJLAKLA_03504 ( 36) GCCAGAAAAAGGACG 1 KOJLAKLA_04683 ( 7) GCCATAAGAACGGCG 1 KOJLAKLA_05259 ( 68) GTCTGAAAAATGGCG 1 KOJLAKLA_03342 ( 54) GCCAGAAAAATTGCG 1 KOJLAKLA_03957 ( 62) GCTAAAAAAATGGCG 1 KOJLAKLA_03285 ( 67) GCCTTAAAAACGACG 1 KOJLAKLA_03568 ( 20) CTTATAAAAAGGGCG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCCAKAAAAABGGCG MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 15 n= 27348 bayes= 10.9106 E= 5.6e+002 -945 -63 202 -945 -945 169 -945 -3 -945 169 -945 -3 137 -945 -945 -3 -95 -945 102 56 186 -945 -945 -945 186 -945 -945 -945 163 -945 -57 -945 186 -945 -945 -945 186 -945 -945 -945 -945 37 43 56 -945 -945 202 -103 5 -945 175 -945 -945 218 -945 -945 -945 -945 224 -945 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCCAKAAAAABGGCG MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 15 nsites= 7 E= 5.6e+002 0.000000 0.142857 0.857143 0.000000 0.000000 0.714286 0.000000 0.285714 0.000000 0.714286 0.000000 0.285714 0.714286 0.000000 0.000000 0.285714 0.142857 0.000000 0.428571 0.428571 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.857143 0.000000 0.142857 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.285714 0.285714 0.428571 0.000000 0.000000 0.857143 0.142857 0.285714 0.000000 0.714286 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCCAKAAAAABGGCG MEME-2 regular expression -------------------------------------------------------------------------------- G[CT][CT][AT][GT]AAAAA[TCG]G[GA]CG -------------------------------------------------------------------------------- Time 85.34 secs. ******************************************************************************** ******************************************************************************** MOTIF GGACNTCGCGTBDTBCGHVCAGHRMCAMC MEME-3 width = 29 sites = 4 llr = 111 E-value = 1.1e+002 ******************************************************************************** -------------------------------------------------------------------------------- Motif GGACNTCGCGTBDTBCGHVCAGHRMCAMC MEME-3 Description -------------------------------------------------------------------------------- Simplified A ::a:3:::::::33:::33:a3555:a5: pos.-specific C :3:a3:a:8:33::58:358::3:5a:5a probability G a8::3::a3a:55:33a:3::8:5::::: matrix T ::::3a::::83383::5:3::3:::::: bits 2.2 * * ** * * * * 2.0 * * ** * * * * 1.8 * ** *** * * * ** * 1.6 * ** *** * * * ** * Relative 1.3 **** ***** ** *** ** * Entropy 1.1 **** ****** ** *** ****** (40.1 bits) 0.9 **** ****** * ** *** ****** 0.7 **** ******* **** **** ****** 0.4 **** ************************ 0.2 **** ************************ 0.0 ----------------------------- Multilevel GGACATCGCGTGGTCCGTCCAGAAACAAC consensus C C G CCAAGG AAT ACGC C sequence G TT T CG T T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGACNTCGCGTBDTBCGHVCAGHRMCAMC MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- ----------------------------- KOJLAKLA_04173 35 9.73e-15 ATACTGACTA GCACGTCGCGCGGTCCGACCAGAACCACC GCTTTAATAG KOJLAKLA_03827 8 7.02e-14 CCTGTTG GGACCTCGCGTTTTGCGTACAGAGACAAC TGCGCTCACC KOJLAKLA_04182 38 1.06e-13 GTCTAGCGTA GGACTTCGCGTGGTCGGTGTAGTGACACC AACACAGGCT KOJLAKLA_03942 44 1.86e-12 AACGGCTGAA GGACATCGGGTCAATCGCCCAACACCAAC CTCATGAAAT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGACNTCGCGTBDTBCGHVCAGHRMCAMC MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- KOJLAKLA_04173 9.7e-15 34_[+3]_37 KOJLAKLA_03827 7e-14 7_[+3]_64 KOJLAKLA_04182 1.1e-13 37_[+3]_34 KOJLAKLA_03942 1.9e-12 43_[+3]_28 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGACNTCGCGTBDTBCGHVCAGHRMCAMC MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GGACNTCGCGTBDTBCGHVCAGHRMCAMC width=29 seqs=4 KOJLAKLA_04173 ( 35) GCACGTCGCGCGGTCCGACCAGAACCACC 1 KOJLAKLA_03827 ( 8) GGACCTCGCGTTTTGCGTACAGAGACAAC 1 KOJLAKLA_04182 ( 38) GGACTTCGCGTGGTCGGTGTAGTGACACC 1 KOJLAKLA_03942 ( 44) GGACATCGGGTCAATCGCCCAACACCAAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGACNTCGCGTBDTBCGHVCAGHRMCAMC MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 29 n= 22896 bayes= 12.4826 E= 1.1e+002 -865 -865 224 -865 -865 18 182 -865 185 -865 -865 -865 -865 218 -865 -865 -14 18 24 -22 -865 -865 -865 178 -865 218 -865 -865 -865 -865 224 -865 -865 176 24 -865 -865 -865 224 -865 -865 18 -865 136 -865 18 124 -22 -14 -865 124 -22 -14 -865 -865 136 -865 118 24 -22 -865 176 24 -865 -865 -865 224 -865 -14 18 -865 78 -14 118 24 -865 -865 176 -865 -22 185 -865 -865 -865 -14 -865 182 -865 86 18 -865 -22 86 -865 124 -865 86 118 -865 -865 -865 218 -865 -865 185 -865 -865 -865 86 118 -865 -865 -865 218 -865 -865 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGACNTCGCGTBDTBCGHVCAGHRMCAMC MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 29 nsites= 4 E= 1.1e+002 0.000000 0.000000 1.000000 0.000000 0.000000 0.250000 0.750000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.250000 0.250000 0.250000 0.250000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.750000 0.250000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.250000 0.000000 0.750000 0.000000 0.250000 0.500000 0.250000 0.250000 0.000000 0.500000 0.250000 0.250000 0.000000 0.000000 0.750000 0.000000 0.500000 0.250000 0.250000 0.000000 0.750000 0.250000 0.000000 0.000000 0.000000 1.000000 0.000000 0.250000 0.250000 0.000000 0.500000 0.250000 0.500000 0.250000 0.000000 0.000000 0.750000 0.000000 0.250000 1.000000 0.000000 0.000000 0.000000 0.250000 0.000000 0.750000 0.000000 0.500000 0.250000 0.000000 0.250000 0.500000 0.000000 0.500000 0.000000 0.500000 0.500000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.500000 0.500000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGACNTCGCGTBDTBCGHVCAGHRMCAMC MEME-3 regular expression -------------------------------------------------------------------------------- G[GC]AC[ACGT]TCG[CG]G[TC][GCT][GAT][TA][CGT][CG]G[TAC][CAG][CT]A[GA][ACT][AG][AC]CA[AC]C -------------------------------------------------------------------------------- Time 126.92 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- KOJLAKLA_00016 4.30e-02 35_[+1(3.52e-05)]_54 KOJLAKLA_00023 9.80e-01 100 KOJLAKLA_00061 4.54e-01 100 KOJLAKLA_00077 9.12e-01 100 KOJLAKLA_00080 6.44e-01 100 KOJLAKLA_00111 7.70e-01 100 KOJLAKLA_00141 2.90e-02 82_[+2(7.18e-05)]_3 KOJLAKLA_00165 7.27e-01 100 KOJLAKLA_00166 7.46e-01 100 KOJLAKLA_00181 4.86e-01 100 KOJLAKLA_00186 3.44e-01 100 KOJLAKLA_00204 6.45e-01 100 KOJLAKLA_00211 3.81e-01 100 KOJLAKLA_00255 7.17e-01 100 KOJLAKLA_00271 6.99e-01 100 KOJLAKLA_00295 7.15e-01 100 KOJLAKLA_00301 2.11e-01 100 KOJLAKLA_00304 5.40e-01 100 KOJLAKLA_00319 1.48e-01 100 KOJLAKLA_00320 6.57e-01 100 KOJLAKLA_00326 4.53e-01 100 KOJLAKLA_00348 6.81e-01 100 KOJLAKLA_00353 9.99e-01 100 KOJLAKLA_00373 6.32e-01 100 KOJLAKLA_00380 3.16e-01 100 KOJLAKLA_00387 8.55e-02 100 KOJLAKLA_00388 5.09e-01 100 KOJLAKLA_00390 2.23e-01 100 KOJLAKLA_00434 2.47e-01 100 KOJLAKLA_00450 5.76e-01 100 KOJLAKLA_00455 3.71e-02 100 KOJLAKLA_00458 8.56e-02 100 KOJLAKLA_00490 4.69e-02 89_[+1(6.83e-05)] KOJLAKLA_00506 7.90e-02 100 KOJLAKLA_00512 6.36e-02 100 KOJLAKLA_00535 2.29e-04 80_[+1(1.91e-06)]_9 KOJLAKLA_00553 9.92e-01 100 KOJLAKLA_00555 8.98e-01 100 KOJLAKLA_00615 5.41e-01 100 KOJLAKLA_00633 9.58e-01 100 KOJLAKLA_00640 6.31e-02 100 KOJLAKLA_00658 6.65e-01 100 KOJLAKLA_00669 1.84e-01 100 KOJLAKLA_00702 6.49e-01 100 KOJLAKLA_00752 6.11e-01 100 KOJLAKLA_00799 4.78e-02 100 KOJLAKLA_00873 3.05e-01 100 KOJLAKLA_00894 1.12e-01 100 KOJLAKLA_00914 7.65e-01 100 KOJLAKLA_00921 5.30e-01 100 KOJLAKLA_00933 1.02e-01 100 KOJLAKLA_00971 2.32e-01 100 KOJLAKLA_00976 2.39e-01 100 KOJLAKLA_00996 2.36e-01 100 KOJLAKLA_01067 9.44e-01 100 KOJLAKLA_01068 2.54e-01 100 KOJLAKLA_01179 7.77e-01 100 KOJLAKLA_01180 7.24e-01 100 KOJLAKLA_01252 2.36e-01 100 KOJLAKLA_01255 1.54e-01 100 KOJLAKLA_01324 5.99e-01 100 KOJLAKLA_01334 4.58e-01 100 KOJLAKLA_01354 6.21e-01 100 KOJLAKLA_01370 8.38e-01 100 KOJLAKLA_01423 4.65e-01 100 KOJLAKLA_01445 9.55e-01 100 KOJLAKLA_01455 3.41e-01 100 KOJLAKLA_01467 4.91e-01 100 KOJLAKLA_01470 4.94e-01 100 KOJLAKLA_01475 2.53e-01 100 KOJLAKLA_01630 7.39e-01 100 KOJLAKLA_01644 3.62e-01 100 KOJLAKLA_01645 8.88e-02 100 KOJLAKLA_01648 7.43e-01 100 KOJLAKLA_01671 9.43e-01 100 KOJLAKLA_01734 7.95e-01 100 KOJLAKLA_01803 3.49e-03 55_[+1(8.90e-06)]_34 KOJLAKLA_01811 8.35e-03 86_[+1(5.23e-05)]_3 KOJLAKLA_01820 1.17e-01 100 KOJLAKLA_01822 3.62e-01 100 KOJLAKLA_01828 4.77e-01 100 KOJLAKLA_01842 8.96e-02 52_[+2(6.96e-05)]_33 KOJLAKLA_01846 9.32e-01 100 KOJLAKLA_01849 3.82e-02 100 KOJLAKLA_01865 4.52e-01 100 KOJLAKLA_01868 2.30e-01 100 KOJLAKLA_01876 9.81e-01 100 KOJLAKLA_01889 8.21e-02 70_[+2(8.53e-05)]_15 KOJLAKLA_01907 7.05e-01 100 KOJLAKLA_01993 9.59e-01 100 KOJLAKLA_01997 3.54e-04 57_[+1(5.27e-07)]_32 KOJLAKLA_02003 5.38e-01 100 KOJLAKLA_02008 8.09e-01 100 KOJLAKLA_02019 3.49e-03 62_[+1(6.24e-06)]_27 KOJLAKLA_02087 9.93e-01 100 KOJLAKLA_02101 8.92e-01 100 KOJLAKLA_02106 3.08e-01 100 KOJLAKLA_02112 4.86e-01 100 KOJLAKLA_02119 3.08e-01 100 KOJLAKLA_02263 6.76e-05 43_[+1(2.11e-06)]_46 KOJLAKLA_02273 6.85e-01 100 KOJLAKLA_02274 9.99e-01 100 KOJLAKLA_02299 5.48e-01 100 KOJLAKLA_02301 9.30e-01 100 KOJLAKLA_02325 4.92e-01 100 KOJLAKLA_02332 8.32e-01 100 KOJLAKLA_02335 3.65e-01 100 KOJLAKLA_02342 9.61e-01 100 KOJLAKLA_02343 5.92e-04 15_[+1(3.38e-06)]_74 KOJLAKLA_02400 5.04e-01 100 KOJLAKLA_02401 9.14e-01 100 KOJLAKLA_02402 1.01e-01 100 KOJLAKLA_02458 2.99e-01 100 KOJLAKLA_02486 5.50e-01 100 KOJLAKLA_02496 1.08e-02 100 KOJLAKLA_02514 5.39e-01 100 KOJLAKLA_02531 1.65e-01 100 KOJLAKLA_02543 7.75e-01 100 KOJLAKLA_02641 9.09e-02 100 KOJLAKLA_02743 9.98e-01 100 KOJLAKLA_02763 3.76e-01 100 KOJLAKLA_02764 6.22e-01 100 KOJLAKLA_02797 9.39e-02 100 KOJLAKLA_02867 5.61e-01 100 KOJLAKLA_02878 3.87e-01 100 KOJLAKLA_02987 1.30e-01 100 KOJLAKLA_03006 3.44e-01 100 KOJLAKLA_03017 7.02e-01 100 KOJLAKLA_03023 8.91e-01 100 KOJLAKLA_03038 3.02e-03 7_[+2(4.93e-05)]_78 KOJLAKLA_03052 6.43e-01 100 KOJLAKLA_03099 3.08e-01 100 KOJLAKLA_03109 2.23e-01 100 KOJLAKLA_03114 1.69e-01 100 KOJLAKLA_03152 2.07e-01 100 KOJLAKLA_03223 8.07e-01 100 KOJLAKLA_03267 7.92e-01 100 KOJLAKLA_03285 1.93e-04 66_[+2(7.28e-08)]_19 KOJLAKLA_03342 9.85e-05 53_[+2(2.97e-08)]_32 KOJLAKLA_03387 1.22e-01 100 KOJLAKLA_03391 8.26e-01 100 KOJLAKLA_03393 7.51e-01 100 KOJLAKLA_03407 2.65e-01 100 KOJLAKLA_03418 1.44e-01 100 KOJLAKLA_03430 5.63e-01 100 KOJLAKLA_03434 6.32e-01 100 KOJLAKLA_03459 4.49e-01 100 KOJLAKLA_03462 5.88e-01 100 KOJLAKLA_03498 2.34e-01 100 KOJLAKLA_03504 3.06e-05 35_[+2(1.12e-08)]_50 KOJLAKLA_03516 1.70e-01 100 KOJLAKLA_03519 4.41e-02 36_[+1(4.84e-05)]_53 KOJLAKLA_03525 6.11e-01 100 KOJLAKLA_03537 9.17e-01 100 KOJLAKLA_03561 9.16e-01 100 KOJLAKLA_03563 9.87e-01 100 KOJLAKLA_03568 1.11e-04 19_[+2(2.92e-07)]_66 KOJLAKLA_03585 5.57e-01 100 KOJLAKLA_03593 1.73e-01 100 KOJLAKLA_03594 2.83e-01 100 KOJLAKLA_03664 1.11e-01 100 KOJLAKLA_03667 7.58e-01 100 KOJLAKLA_03697 1.71e-01 100 KOJLAKLA_03699 3.43e-01 100 KOJLAKLA_03748 9.40e-01 100 KOJLAKLA_03792 4.32e-01 100 KOJLAKLA_03798 7.65e-01 100 KOJLAKLA_03811 7.63e-01 100 KOJLAKLA_03827 7.09e-10 7_[+3(7.02e-14)]_64 KOJLAKLA_03828 3.64e-01 100 KOJLAKLA_03905 2.97e-01 100 KOJLAKLA_03931 2.90e-01 100 KOJLAKLA_03935 4.78e-01 100 KOJLAKLA_03940 2.03e-01 100 KOJLAKLA_03942 9.00e-09 43_[+3(1.86e-12)]_28 KOJLAKLA_03946 7.88e-01 100 KOJLAKLA_03950 2.74e-01 100 KOJLAKLA_03957 3.09e-04 61_[+2(5.66e-08)]_24 KOJLAKLA_03969 9.38e-04 12_[+1(5.27e-07)]_77 KOJLAKLA_03980 3.15e-01 100 KOJLAKLA_03986 9.35e-02 100 KOJLAKLA_03991 6.07e-01 100 KOJLAKLA_04002 5.58e-01 100 KOJLAKLA_04042 4.56e-01 100 KOJLAKLA_04045 4.65e-05 6_[+1(3.38e-06)]_83 KOJLAKLA_04046 2.13e-01 100 KOJLAKLA_04058 1.21e-01 100 KOJLAKLA_04062 9.23e-01 100 KOJLAKLA_04063 6.26e-02 100 KOJLAKLA_04065 1.07e-01 100 KOJLAKLA_04067 4.58e-01 100 KOJLAKLA_04079 8.99e-01 100 KOJLAKLA_04093 5.90e-01 100 KOJLAKLA_04097 4.37e-01 100 KOJLAKLA_04101 5.61e-01 100 KOJLAKLA_04102 1.90e-01 100 KOJLAKLA_04114 9.75e-01 100 KOJLAKLA_04128 7.98e-01 100 KOJLAKLA_04130 2.22e-03 36_[+1(1.69e-06)]_53 KOJLAKLA_04133 2.35e-01 100 KOJLAKLA_04160 3.46e-01 100 KOJLAKLA_04162 6.13e-01 100 KOJLAKLA_04163 5.35e-01 100 KOJLAKLA_04164 3.43e-05 41_[+1(5.27e-07)]_48 KOJLAKLA_04165 8.49e-02 100 KOJLAKLA_04166 2.38e-01 100 KOJLAKLA_04167 1.65e-01 100 KOJLAKLA_04169 6.69e-02 100 KOJLAKLA_04170 8.69e-01 100 KOJLAKLA_04171 2.19e-01 100 KOJLAKLA_04172 2.23e-01 100 KOJLAKLA_04173 5.30e-11 34_[+3(9.73e-15)]_37 KOJLAKLA_04174 9.64e-01 100 KOJLAKLA_04175 3.77e-02 100 KOJLAKLA_04176 7.83e-01 100 KOJLAKLA_04177 3.49e-01 100 KOJLAKLA_04178 4.94e-02 100 KOJLAKLA_04179 1.20e-01 100 KOJLAKLA_04180 7.36e-01 100 KOJLAKLA_04181 1.82e-01 100 KOJLAKLA_04182 3.91e-10 37_[+3(1.06e-13)]_34 KOJLAKLA_04183 2.48e-01 100 KOJLAKLA_04184 4.70e-01 100 KOJLAKLA_04185 2.00e-01 100 KOJLAKLA_04186 4.54e-01 100 KOJLAKLA_04187 5.17e-01 100 KOJLAKLA_04188 6.59e-01 100 KOJLAKLA_04189 7.21e-01 100 KOJLAKLA_04193 8.28e-01 100 KOJLAKLA_04194 9.13e-02 100 KOJLAKLA_04195 2.37e-01 100 KOJLAKLA_04196 1.92e-01 100 KOJLAKLA_04230 4.86e-01 100 KOJLAKLA_04253 9.88e-01 100 KOJLAKLA_04254 5.11e-01 100 KOJLAKLA_04265 2.68e-01 100 KOJLAKLA_04270 5.27e-01 100 KOJLAKLA_04271 3.64e-01 100 KOJLAKLA_04291 4.83e-01 100 KOJLAKLA_04314 5.01e-01 100 KOJLAKLA_04352 1.43e-01 100 KOJLAKLA_04353 1.29e-01 100 KOJLAKLA_04379 9.41e-01 100 KOJLAKLA_04408 1.19e-01 100 KOJLAKLA_04451 2.53e-01 100 KOJLAKLA_04474 7.02e-01 100 KOJLAKLA_04480 2.79e-01 100 KOJLAKLA_04489 1.88e-03 14_[+1(2.11e-06)]_75 KOJLAKLA_04495 4.54e-01 100 KOJLAKLA_04524 4.02e-01 100 KOJLAKLA_04525 6.27e-01 100 KOJLAKLA_04529 1.35e-01 100 KOJLAKLA_04537 3.02e-01 100 KOJLAKLA_04605 2.63e-03 3_[+1(6.24e-06)]_86 KOJLAKLA_04631 2.71e-01 100 KOJLAKLA_04643 6.60e-01 100 KOJLAKLA_04654 5.65e-01 100 KOJLAKLA_04676 1.61e-01 100 KOJLAKLA_04677 1.05e-02 31_[+3(4.92e-05)]_40 KOJLAKLA_04678 2.67e-01 100 KOJLAKLA_04679 1.88e-01 100 KOJLAKLA_04680 1.21e-01 100 KOJLAKLA_04681 3.09e-01 100 KOJLAKLA_04682 7.98e-01 100 KOJLAKLA_04683 5.04e-06 6_[+2(2.72e-08)]_79 KOJLAKLA_04684 3.64e-01 100 KOJLAKLA_04688 8.35e-01 100 KOJLAKLA_04698 1.54e-01 100 KOJLAKLA_04700 1.56e-01 100 KOJLAKLA_04705 3.35e-01 100 KOJLAKLA_04714 6.58e-01 100 KOJLAKLA_04722 1.21e-01 100 KOJLAKLA_04772 4.11e-02 100 KOJLAKLA_04784 2.78e-01 100 KOJLAKLA_04804 6.39e-01 100 KOJLAKLA_04813 6.89e-01 100 KOJLAKLA_04826 7.26e-01 100 KOJLAKLA_04843 1.55e-01 100 KOJLAKLA_04884 1.95e-01 100 KOJLAKLA_04886 9.66e-03 100 KOJLAKLA_04892 8.33e-01 100 KOJLAKLA_04915 7.41e-01 100 KOJLAKLA_04919 8.13e-02 100 KOJLAKLA_04933 8.07e-02 100 KOJLAKLA_04935 1.83e-02 45_[+1(4.32e-05)]_44 KOJLAKLA_04936 5.14e-01 100 KOJLAKLA_04937 7.27e-01 100 KOJLAKLA_04938 9.00e-01 100 KOJLAKLA_04939 2.36e-01 100 KOJLAKLA_04940 2.09e-01 100 KOJLAKLA_04941 1.48e-01 100 KOJLAKLA_04970 9.47e-01 100 KOJLAKLA_04976 5.65e-01 100 KOJLAKLA_05034 9.96e-01 100 KOJLAKLA_05056 8.28e-01 100 KOJLAKLA_05076 8.52e-01 100 KOJLAKLA_05118 6.68e-01 100 KOJLAKLA_05164 2.73e-01 100 KOJLAKLA_05195 1.22e-02 41_[+1(3.52e-05)]_48 KOJLAKLA_05208 5.85e-01 100 KOJLAKLA_05217 3.49e-01 100 KOJLAKLA_05219 3.99e-01 100 KOJLAKLA_05220 6.11e-01 100 KOJLAKLA_05230 2.87e-01 100 KOJLAKLA_05234 2.79e-01 100 KOJLAKLA_05257 6.41e-01 100 KOJLAKLA_05259 6.47e-06 67_[+2(2.97e-08)]_18 KOJLAKLA_05262 3.09e-03 100 KOJLAKLA_05264 5.96e-01 100 KOJLAKLA_05272 1.80e-01 100 KOJLAKLA_05288 9.22e-01 100 KOJLAKLA_05318 4.01e-01 100 KOJLAKLA_05322 2.26e-02 100 KOJLAKLA_05338 6.77e-02 38_[+2(4.19e-05)]_47 KOJLAKLA_05354 9.72e-01 100 KOJLAKLA_05368 8.35e-04 18_[+1(6.35e-07)]_71 KOJLAKLA_05383 4.59e-01 100 KOJLAKLA_05388 5.24e-01 100 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: kodomo ********************************************************************************