62620 GFF lines processed.
100000 SAM alignment records processed.
200000 SAM alignment records processed.
300000 SAM alignment records processed.
400000 SAM alignment records processed.
500000 SAM alignment records processed.
600000 SAM alignment records processed.
700000 SAM alignment records processed.
800000 SAM alignment records processed.
900000 SAM alignment records processed.
1000000 SAM alignment records processed.
1100000 SAM alignment records processed.
1200000 SAM alignment records processed.
1293031 SAM alignments  processed.