########################################
# Program: water
# Rundate: Fri 30 Mar 2012 01:21:52
# Commandline: water
#    [-asequence] SPSE.fasta
#    [-bsequence] SIAS.fasta
#    [-outfile] alignmentwater.txt
#    -gapopen 11
#    -gapextend 1
# Align_format: srspair
# Report_file: alignmentwater.txt
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: SPSE_BACSU
# 2: SIAS_HUMAN
# Matrix: EBLOSUM62
# Gap_penalty: 11.0
# Extend_penalty: 1.0
#
# Length: 331
# Identity:     103/331 (31.1%)
# Similarity:   153/331 (46.2%)
# Gaps:          23/331 ( 6.9%)
# Score: 363.0
# 
#
#=======================================

SPSE_BACSU        11 VGKDAPVFIIAEAGINHDGKLDQAFALIDAAAEAGADAVKFQM----FQA     56
                     ||...|.|||||.|.||.|.||.|..:|..|.|.|||..|||.    |:.
SIAS_HUMAN        13 VGGQHPCFIIAEIGQNHQGDLDVAKRMIRMAKECGADCAKFQKSELEFKF     62

SPSE_BACSU        57 DRMYQKDPGLYKTAAGKDVSIFSLVQSMEMPAEWILPLLDYCREKQVIFL    106
                     :|...:.|...|.:.||......  :.:|...:....|..|..|..:.|.
SIAS_HUMAN        63 NRKALERPYTSKHSWGKTYGEHK--RHLEFSHDQYRELQRYAEEVGIFFT    110

SPSE_BACSU       107 STVCDEGSADLLQSTSPSAFKIASYEINHLPLLKYVARLNRPMIFSTAGA    156
                     ::..||.:.:.|...:...||:.|.:.|:.|.|:..|:..|||:.|:...
SIAS_HUMAN       111 ASGMDEMAVEFLHELNVPFFKVGSGDTNNFPYLEKTAKKGRPMVISSGMQ    160

SPSE_BACSU       157 EISDVHEAWRTIRAEGNNQIAIMHCVAKYPAPPEYSNLSVIPMLAAAFPE    206
                     .:..:.:.::.::.. |.....:.|.:.||..||..||.||......||:
SIAS_HUMAN       161 SMDTMKQVYQIVKPL-NPNFCFLQCTSAYPLQPEDVNLRVISEYQKLFPD    209

SPSE_BACSU       207 AVIGFSDHSEHPTEAPCAAVRLGAKLIEKHFTIDKNLPGADHSFALNPDE    256
                     ..||:|.| |.......|||.||||::|:|.|:||...|:|||.:|.|.|
SIAS_HUMAN       210 IPIGYSGH-ETGIAISVAAVALGAKVLERHITLDKTWKGSDHSASLEPGE    258

SPSE_BACSU       257 LKEMVDGIRKTEAELKQGITKPVSEKLLGSSYKTTTAIEGEIRNFAYRGI    306
                     |.|:|..:|             :.|:.|||..|.....|........:.:
SIAS_HUMAN       259 LAELVRSVR-------------LVERALGSPTKQLLPCEMACNEKLGKSV    295

SPSE_BACSU       307 FTTAPIQKGEAFSEDNIAVLRPGQKPQGLHP    337
                     .....|.:|...:.|.:.| :.|: |:|..|
SIAS_HUMAN       296 VAKVKIPEGTILTMDMLTV-KVGE-PKGYPP    324


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