RMSD of the bases (----- for WC bp, + for isolated bp, x for helix change)

            Strand I                    Strand II          Helix
   1   (0.023) C:...1_:[..G]G-----C[..C]:..72_:C (0.006)     |
   2   (0.005) C:...2_:[..C]C-----G[..G]:..71_:C (0.017)     |
   3   (0.016) C:...3_:[..C]C-----G[..G]:..70_:C (0.016)     |
   4   (0.025) C:...4_:[..G]G-----C[..C]:..69_:C (0.013)     |
   5   (0.015) C:...5_:[..A]A-----U[..U]:..68_:C (0.017)     |
   6   (0.015) C:...6_:[..G]G-----C[..C]:..67_:C (0.012)     |
   7   (0.014) C:...7_:[..G]Gx----C[..C]:..66_:C (0.013)     |
   8   (0.006) C:..49_:[..C]C-----G[..G]:..65_:C (0.011)     |
   9   (0.016) C:..50_:[..G]G-----C[..C]:..64_:C (0.014)     |
  10   (0.015) C:..51_:[..C]C-----G[..G]:..63_:C (0.019)     |
  11   (0.011) C:..52_:[..G]G-----C[..C]:..62_:C (0.017)     |
  12   (0.015) C:..53_:[..G]Gx---xC[..C]:..61_:C (0.013)     x
  13   (0.014) C:..39_:[..U]U-----A[..A]:..31_:C (0.024)     |
  14   (0.010) C:..40_:[..C]C-----G[..G]:..30_:C (0.024)     |
  15   (0.020) C:..41_:[..G]G-----C[..C]:..29_:C (0.006)     |
  16   (0.017) C:..42_:[..C]C-----G[..G]:..28_:C (0.012)     |
  17   (0.014) C:..43_:[..A]A-----U[..U]:..27_:C (0.020)     |
  18   (0.019) C:..44_:[..G]Gx*---A[..A]:..26_:C (0.022)     |
  19   (0.014) C:..10_:[..G]G-----C[..C]:..25_:C (0.015)     |
  20   (0.012) C:..11_:[..C]C-----G[..G]:..24_:C (0.025)     |
  21   (0.013) C:..12_:[..U]U-----A[..A]:..23_:C (0.015)     |
  22   (0.010) C:..13_:[..C]C----xG[..G]:..22_:C (0.019)     |
  23   (0.019) C:..14_:[..A]A-**-xU[..U]:...8_:C (0.006)     |
  24   (0.012) C:..15_:[..G]G-**+xC[..C]:..48_:C (0.031)     |
  25   (0.011) C:..16_:[..U]Ux**+xU[..U]:..59_:C (0.016)     x
  26   (0.019) C:..18_:[..G]G-**+-U[..U]:..55_:C (0.009)     |
  27   (0.026) C:..19_:[..G]Gx---xC[..C]:..56_:C (0.014)     x
  28   (0.013) C:..73_:[..A]Ax**+xC[..C]:..74_:C (0.017)     +
  29   (0.016) C:..45_:[..U]U-*---A[..A]:...9_:C (0.017)     +