########################################
# Program: needle
# Rundate: Tue Apr 03 2007 17:07:22
# Commandline: needle
#    [-asequence] Q65YQ3.fasta
#    [-bsequence] P47863.fasta
#    -outfile alignment1.needle
# Align_format: srspair
# Report_file: alignment1.needle
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: Q65YQ3_CHICK
# 2: AQP4_RAT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 335
# Identity:     272/335 (81.2%)
# Similarity:   292/335 (87.2%)
# Gaps:          12/335 ( 3.6%)
# Score: 1429.0
# 
#
#=======================================

Q65YQ3_CHICK       1 MIANDPRLRRQRLKRPPPARSSSKCARLCKCESIMVAFKGVWTHPFWKAV     50
                                 :.....||...||...|..||||||||||||..|||||
AQP4_RAT           1 ------------MSDGAAARRWGKCGPPCSRESIMVAFKGVWTQAFWKAV     38

Q65YQ3_CHICK      51 SAEFLVMLIFVLLSLGSTINWGGSEKPLPVDMVLISLCFGLSIATMVQCF    100
                     :||||.||||||||:||||||||||.||||||||||||||||||||||||
AQP4_RAT          39 TAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCF     88

Q65YQ3_CHICK     101 GHISGGHINPAVTVAMVCTRKISLAKSVFYILAQCLGAIVGAGILYLITP    150
                     |||||||||||||||||||||||:|||||||.|||||||:|||||||:||
AQP4_RAT          89 GHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTP    138

Q65YQ3_CHICK     151 PSVVGGLGVTAVHGDLSAGHGLLVELIITFQLVFTIFASCDSKRSDVTGS    200
                     ||||||||||.|||:|:|||||||||||||||||||||||||||:|||||
AQP4_RAT         139 PSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGS    188

Q65YQ3_CHICK     201 VALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGKWENQWVYWVGPI    250
                     |||||||||||||||||||||||||||||||||||||.|||.|:||||||
AQP4_RAT         189 VALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPI    238

Q65YQ3_CHICK     251 IGAVLAGALYEYVYCPDVELKRRFKDVFSKATQPSKGKYIEVDDTRSHVE    300
                     |||||||||||||:|||||||||.|:.||||.|.:||.|:||:|.||.||
AQP4_RAT         239 IGAVLAGALYEYVFCPDVELKRRLKEAFSKAAQQTKGSYMEVEDNRSQVE    288

Q65YQ3_CHICK     301 TDDLILKPGIVHVIDIDRSEDKKGRDPSSEVLSSV    335
                     |:|||||||:||||||||.::|||:|.|.||||||
AQP4_RAT         289 TEDLILKPGVVHVIDIDRGDEKKGKDSSGEVLSSV    323


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