FastQCFastQC Report
Пн 22 дек 2014
Ath_tae_CTTGTA_L003_R1_002_trimmed.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameAth_tae_CTTGTA_L003_R1_002_trimmed.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3837711
Sequences flagged as poor quality0
Sequence length50-101
%GC35

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCGGCC2450.0027710248.59539124-25
GGGCCAT5508.2965073E-48.5079031
GCGGCCG2809.910578E-48.35706626-27
TCGCGGC3305.793903E-47.79916534-35
CGGCCGC3000.00196345157.797996538-39
ATCGCGG4452.5991356E-46.835223734-35
TATCGCG4450.00193182746.30972522-23
CACGCCT4200.00577313136.273265470-71
CCATACT14059.276091E-65.99458034
Produced by FastQC (version 0.11.2)