Header
Program needle
Rundate Sun Mar 25 2007 19:54:58
Align format srspair
Report file temp_job6.needlep
Results
 
#=======================================
#
# Aligned_sequences: 2
# 1: SYYC_HUMAN
# 2: SYY_ECOLI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 337
# Identity:      66/337 (19.6%)
# Similarity:   117/337 (34.7%)
# Gaps:          81/337 (24.0%)
# Score: 56.5
# 
#
#=======================================

SYYC_HUMAN         1 ILKERELKIYWG-TATTGKPHVAYFVPMSKIADFLKAGCE-------VTI     42
                     .|.:..:.:|.| ..|....|:.:.||:..:..|.:||.:       .|.
SYY_ECOLI          1 RLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQAGHKPVALVGGATG     50

SYYC_HUMAN        43 LFAD---------------LHAYLDNMK---APW------ELLELRVSYY     68
                     |..|               :..::|.::   ||:      |...:..:.|
SYY_ECOLI         51 LIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIAANNY    100

SYYC_HUMAN        69 E-----NVIKAMLESIGVPLEKLKFIKGTDYQLSKEYTLDVYRLSSVVTQ    113
                     :     ||: ..|..||                 |.::::.......|.|
SYY_ECOLI        101 DWFGNMNVL-TFLRDIG-----------------KHFSVNQMINKEAVKQ    132

SYYC_HUMAN       114 HDSKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQFGGIDQRKIF    163
                     ..:::.......:..:.||.|.   ....|:::| .|..|.||.||....
SYY_ECOLI        133 RLNREDQGISFTEFSYNLLQGY---DFACLNKQY-GVVLQIGGSDQWGNI    178

SYYC_HUMAN       164 TFAEKYLPALGYSKRVH------LMNPMVPGLTGSKMSSSEEESKIDLLD    207
                     |      ..:..::|:|      |..|::....|:|...:|..:.  .||
SYY_ECOLI        179 T------SGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGAV--WLD    220

SYYC_HUMAN       208 RKEDVKKKLKKAFCEPGNVENNGVLSFIKHVLFPLKSEFVILRDE-KWGG    256
                     .|:....|..:.:.   |..:..|..|:|...|....|...|.:| |..|
SYY_ECOLI        221 PKKTSPYKFYQFWI---NTADADVYRFLKFFTFMSIEEINALEEEDKNSG    267

SYYC_HUMAN       257 NKTYTAYVDLEKDFAAEVVHPGDLKNSVEVALNKLL-    292
                     ......||..|:  ...:|| |:........:.:.| 
SYY_ECOLI        268 KAPRAQYVLAEQ--VTRLVH-GEEGLQAAKRITECLF    301


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