Рисунок 1. Карта локального сходства.
| Alignment | Length of a range (1 protein) | Length of a range (2 protein) | Score | Score (bit) | Identities, % | Positives, % | Gaps | Expect |
|---|---|---|---|---|---|---|---|---|
| 1 | 615 (1594..2208) | 644 (1684..2327) | 652 | 255 | 29 | 49 | 63 | 1e-71 |
| 2 | 276 (1143..1419) | 262 (1121..1383) | 400 | 158 | 37 | 51 | 26 | 4e-42 |
| Protein | Alignment 1 (Protein) | Alignment 1 (FT CHAIN) | Alignment 2 (Protein) | Alignment 2 (FT CHAIN) |
|---|---|---|---|---|
| POLG_POL1S | 1594..2208 | 1566..1747 - Protease 3C 1748..2209 - RNA-directed RNA polymerase | 1143..1419 | 1128..1456 - Protein 2C |
| POLG_FMDV5 | 1684..2327 | 1650..1862 - Picornain 3C1863..2332 - RNA-directed RNA polymerase 3D-POL | 1121..1383 | 1108..1425 - Protein 2C |
| ID 1 | ID 2 | Вес локального выравнивания | Среднее арифметическое весов случайных выравниваний | Медиана | Верхний квартиль | Вес в битах (B) | Вероятность (P) | |
|---|---|---|---|---|---|---|---|---|
| Гомологичные | DAPF_ECOLI | DAPF_BACSU | 386 | 41.95 | 40.75 | 46.5 | 61.0 | 4.3e-19 |
| Негомологичные | LSRK_ECOLI | ADER_BACSU | 37 | 41.64 | 40.75 | 45.0 | 0.12 | 0.92 |
| Alignment | ID | AC | Organism | Length of a range | Score | Score (bit) | Identities, % | Positives, % | Gaps | Expect | Query cover |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | MTNN_ANOFW | B7GIU7.1 | Anoxybacillus flavithermus WK1 | 232 | 292 | 117 | 32 | 51 | 31 | 2e-30 | 88 |
| 2 | MTNN_EXIS2 | B1YJD6.1 | Exiguobacterium sibiricum 255-15 | 234 | 281 | 112 | 30 | 49 | 27 | 6e-29 | 87 |
© Антоненкова Юлия, 2017