Название бактерии: Escherichia coli str. K-12 substr. W3110 Мнемоника: ECOLI Количество аннотированных (Reviewed) записей с ключевым словом "Purine biosynthesis [KW-0658]" в Uniprot: 17 AC записи EMBL, описывающей геном бактерии: AP009048.1
| Entry | Entry name | Protein names | Gene names | Coordinates |
|---|---|---|---|---|
| P0ADG7 | IMDH_ECOLI | Inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase) (IMPD) (IMPDH) (EC 1.1.1.205) | guaB | complement(2631260..2632726) |
| P04079 | GUAA_ECOLI | GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) (GMP synthetase) (GMPS) (Glutamine amidotransferase) | guaA | complement(2629614..2631191) |
| P0AB89 | PUR8_ECOLI | Adenylosuccinate lyase (ASL) (EC 4.3.2.2) (Adenylosuccinase) (ASase) | purB | complement(1192193..1193563) |
| P0ACP7 | PURR_ECOLI | HTH-type transcriptional repressor PurR (Pur regulon repressor) (Purine nucleotide synthesis repressor) | purR | 1739558..1740583 |
| P15254 | PUR4_ECOLI | Phosphoribosylformylglycinamidine synthase (FGAM synthase) (FGAMS) (EC 6.3.5.3) (Formylglycinamide ribonucleotide amidotransferase) (FGAR amidotransferase) (FGAR-AT) | purL | complement(2690312..2694199) |
| P0AG16 | PUR1_ECOLI | Amidophosphoribosyltransferase (ATase) (EC 2.4.2.14) (Glutamine phosphoribosylpyrophosphate amidotransferase) (GPATase) | purF | complement(2434167..2435684) |
| P08179 | PUR3_ECOLI | Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) (5'-phosphoribosylglycinamide transformylase) (GAR transformylase) (GART) | purN | 2620890..2621528 |
| P0A7D4 | PURA_ECOLI | Adenylosuccinate synthetase (AMPSase) (AdSS) (EC 6.3.4.4) (IMP--aspartate ligase) | purA | 4409367..4410665 |
| P33221 | PURT_ECOLI | Formate-dependent phosphoribosylglycinamide formyltransferase (5'-phosphoribosylglycinamide transformylase 2) (Formate-dependent GAR transformylase) (EC 2.1.2.-) (GAR transformylase 2) (GART 2) (Non-folate glycinamide ribonucleotide transformylase) (Phosphoribosylglycinamide formyltransferase 2) | purT | 1932595..1933773 |
ememe -revcomp -nmotifs 3 -dataset all_genes.fasta -outdir outрезультат работы MEME У лучшего мотива E-value = 3.2e-002 > 0.01. Этот мотив есть в 6-ти генах, p-value для них приблизительно равно 4e-07.
© Антоненкова Юлия, 2017