FastQCFastQC Report
Сб 27 дек 2014
result.fastq

Summary

[OK]Basic Statistics

MeasureValue
Filenameresult.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3859997
Sequences flagged as poor quality0
Sequence length50-101
%GC35

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGCCGTC7650.024.24653448-49
TATGCCG8950.021.4907746-47
CGTATGC10050.019.1138744-45
GAGCACA17900.018.3269949
GCCGTCT8350.017.43368748-49
TCGGAAG18100.017.0790623
AGAGCAC18950.017.062668
ATGCCGT8800.016.25954446-47
CGTCTGA12850.016.0549816-17
CACACGT13250.015.57030112-13
GTATGCC10150.015.23276744-45
GCACACG10600.015.03783910-11
GATCGGA21650.014.4988551
AGTCACC14100.014.46464728-29
CGGAAGA23150.013.5553664
CACGTCT14750.013.51005614-15
ACGTCTG13000.012.6236514-15
ATCGGAA26150.012.5416422
AGCACAC16750.012.31544810-11
CTCGTAT15600.012.15940242-43
Produced by FastQC (version 0.11.2)