MAST - Motif Alignment and Search Tool
MAST version 4.3.0 (Release date: Sat Sep 26 01:51:56 PDT 2009)
For further information on how to interpret these results or to get
a copy of the MAST software please access http://meme.nbcr.net.
REFERENCE
If you use this program in your research, please cite:
Timothy L. Bailey and Michael Gribskov,
"Combining evidence using p-values: application to sequence homology
searches", Bioinformatics, 14(48-54), 1998.
DATABASE AND MOTIFS
DATABASE ./PF01926_seed.fasta (peptide)
Last updated on Fri May 6 22:19:25 2011
Database contains 721 sequences, 78531 residues
MOTIFS ./memeout.txt (peptide)
MOTIF WIDTH BEST POSSIBLE MATCH
----- ----- -------------------
1 16 VVGMPNVGKSSLINSL
2 18 DCIYEVHDARIPMSTRNP
3 8 WFPGHMAK
PAIRWISE MOTIF CORRELATIONS:
MOTIF 1 2
----- ----- -----
2 0.14
3 0.21 0.12
No overly similar pairs (correlation > 0.60) found.
Random model letter frequencies (from non-redundant database):
A 0.073 C 0.018 D 0.052 E 0.062 F 0.040 G 0.069 H 0.022 I 0.056 K 0.058
L 0.092 M 0.023 N 0.046 P 0.051 Q 0.041 R 0.052 S 0.074 T 0.059 V 0.064
W 0.013 Y 0.033
SECTION I: HIGH-SCORING SEQUENCES
- Each of the following 36 sequences has E-value less than 10.
- The E-value of a sequence is the expected number of sequences
in a random database of the same size that would match the motifs as
well as the sequence does and is equal to the combined p-value of the
sequence times the number of sequences in the database.
- The combined p-value of a sequence measures the strength of the
match of the sequence to all the motifs and is calculated by
- finding the score of the single best match of each motif
to the sequence (best matches may overlap),
- calculating the sequence p-value of each score,
- forming the product of the p-values,
- taking the p-value of the product.
- The sequence p-value of a score is defined as the
probability of a random sequence of the same length containing
some match with as good or better a score.
- The score for the match of a position in a sequence to a motif
is computed by by summing the appropriate entry from each column of
the position-dependent scoring matrix that represents the motif.
- Sequences shorter than one or more of the motifs are skipped.
- The table is sorted by increasing E-value.
| Links | Sequence Name | Description | E-value | Length
|
|---|
|
| ENGA_TREPA/209-317
|
| 0.0029
| 109
|
|
| Q8SRF4_ENCCU/255-337
|
| 0.13
| 83
|
|
| Q7VSW8_BORPE/17-154
|
| 0.32
| 138
|
|
| ENGA_HAEIN/15-121
|
| 0.4
| 107
|
|
| MNME_THEMA/223-327
|
| 0.61
| 105
|
|
| ENGA_CHLTE/189-297
|
| 1.1
| 109
|
|
| O22445_PEA/74-172
|
| 1.2
| 99
|
|
| MNME_HAEIN/226-334
|
| 1.4
| 109
|
|
| MNME_PSEPU/228-336
|
| 1.5
| 109
|
|
| ENGA_ECOL6/14-119
|
| 1.6
| 106
|
|
| Q81A76_BACCR/209-318
|
| 1.9
| 110
|
|
| ENGA_BUCAP/14-120
|
| 2.9
| 107
|
|
| O58859_PYRHO/200-310
|
| 3.2
| 111
|
|
| MNME_LACPL/236-339
|
| 3.2
| 104
|
|
| ENGA_BORPE/16-123
|
| 4.6
| 108
|
|
| YG3Y_YEAST/75-173
|
| 4.9
| 99
|
|
| ENGA_CLOPE/188-296
|
| 4.9
| 109
|
|
| ENGB_BUCAI/38-146
|
| 5
| 109
|
|
| MNME_MYCPN/229-332
|
| 5.6
| 104
|
|
| ENGA_PSESM/14-119
|
| 5.7
| 106
|
|
| MNME_NITEU/227-331
|
| 5.8
| 105
|
|
| MNME_XANCP/228-331
|
| 6.1
| 104
|
|
| ENGA_RHOBA/15-121
|
| 6.1
| 107
|
|
| ENGA_COXBU/187-295
|
| 6.3
| 109
|
|
| Q8H1F6_ARATH/225-341
|
| 6.4
| 117
|
|
| ENGA_BUCBP/212-320
|
| 6.6
| 109
|
|
| O26315_METTH/19-121
|
| 6.8
| 103
|
|
| OBG_BORBU/172-281
|
| 7.4
| 110
|
|
| MNME_CYACA/233-338
|
| 7.7
| 106
|
|
| Q9HMS4_HALSA/45-179
|
| 7.9
| 135
|
|
| ERA_THEMA/17-122
|
| 8
| 106
|
|
| ERA_DEIRA/29-134
|
| 8.9
| 106
|
|
| MNME_WIGBR/228-334
|
| 9.1
| 107
|
|
| Q8SYD1_DROME/307-427
|
| 9.1
| 121
|
|
| ENGA_BRAJA/14-120
|
| 9.2
| 107
|
|
| ENGA_NITEU/14-120
|
| 9.8
| 107
|
SECTION II: MOTIF DIAGRAMS
- The ordering and spacing of all non-overlapping motif occurrences
are shown for each high-scoring sequence listed in Section I.
- A motif occurrence is defined as a position in the sequence whose
match to the motif has POSITION p-value less than 0.0001.
- The POSITION p-value of a match is the probability of
a single random subsequence of the length of the motif
scoring at least as well as the observed match.
- For each sequence, all motif occurrences are shown unless there
are overlaps. In that case, a motif occurrence is shown only if its
p-value is less than the product of the p-values of the other
(lower-numbered) motif occurrences that it overlaps.
- The table also shows the E-value of each sequence.
- Spacers and motif occurences are indicated by
- Spacers and motif occurences are indicated by
- Spacers and motif occurences are indicated by
- occurrence of motif `n' with p-value less than 0.0001.
- Sequences longer than 1000 are not shown to scale and are indicated by thicker lines.
| Links | Name | Expect | Motifs
|
|---|
|
| ENGA_TREPA/209-317
| 0.0029
|
|
|
| Q8SRF4_ENCCU/255-337
| 0.13
|
|
|
| Q7VSW8_BORPE/17-154
| 0.32
|
|
|
| ENGA_HAEIN/15-121
| 0.4
|
|
|
| MNME_THEMA/223-327
| 0.61
|
|
|
| ENGA_CHLTE/189-297
| 1.1
|
|
|
| O22445_PEA/74-172
| 1.2
|
|
|
| MNME_HAEIN/226-334
| 1.4
|
|
|
| MNME_PSEPU/228-336
| 1.5
|
|
|
| ENGA_ECOL6/14-119
| 1.6
|
|
|
| Q81A76_BACCR/209-318
| 1.9
|
|
|
| ENGA_BUCAP/14-120
| 2.9
|
|
|
| O58859_PYRHO/200-310
| 3.2
|
|
|
| MNME_LACPL/236-339
| 3.2
|
|
|
| ENGA_BORPE/16-123
| 4.6
|
|
|
| YG3Y_YEAST/75-173
| 4.9
|
|
|
| ENGA_CLOPE/188-296
| 4.9
|
|
|
| ENGB_BUCAI/38-146
| 5
|
|
|
| MNME_MYCPN/229-332
| 5.6
|
|
|
| ENGA_PSESM/14-119
| 5.7
|
|
|
| MNME_NITEU/227-331
| 5.8
|
|
|
| MNME_XANCP/228-331
| 6.1
|
|
|
| ENGA_RHOBA/15-121
| 6.1
|
|
|
| ENGA_COXBU/187-295
| 6.3
|
|
|
| Q8H1F6_ARATH/225-341
| 6.4
|
|
|
| ENGA_BUCBP/212-320
| 6.6
|
|
|
| O26315_METTH/19-121
| 6.8
|
|
|
| OBG_BORBU/172-281
| 7.4
|
|
|
| MNME_CYACA/233-338
| 7.7
|
|
|
| Q9HMS4_HALSA/45-179
| 7.9
|
|
|
| ERA_THEMA/17-122
| 8
|
|
|
| ERA_DEIRA/29-134
| 8.9
|
|
|
| MNME_WIGBR/228-334
| 9.1
|
|
|
| Q8SYD1_DROME/307-427
| 9.1
|
|
|
| ENGA_BRAJA/14-120
| 9.2
|
|
|
| ENGA_NITEU/14-120
| 9.8
|
|
| SCALE
|
|
|---|
SECTION III: ANNOTATED SEQUENCES
- The positions and p-values of the non-overlapping motif occurrences
are shown above the actual sequence for each of the high-scoring
sequences from Section I.
- A motif occurrence is defined as a position in the sequence whose
match to the motif has POSITION p-value less than 0.0001 as
defined in Section II.
- For each sequence, the first line specifies the name of the sequence.
- The second (and possibly more) lines give a description of the
sequence.
- Following the description line(s) is a line giving the length,
combined p-value, and E-value of the sequence as defined in Section I.
- The next line reproduces the motif diagram from Section II.
- The entire sequence is printed on the following lines.
- Motif occurrences are indicated directly above their positions in the
sequence on lines showing
- the motif number of the occurrence,
- the position p-value of the occurrence,
- the best possible match to the motif, and
- columns whose match to the motif has a positive score (indicated
by a plus sign).
ENGA_TREPA/209-317
LENGTH = 109 COMBINED P-VALUE = 4.06e-06 E-VALUE = 0.0029
DIAGRAM: 72-[2]-19
[2]
8.4
DCI
+++
1 GKSTLMNYLMRRTVSLVCDRAGTTRDVVTGHVEFKQYKFIIADTAGIRKRQKVYESIEYYSVIRAISILNAVDIV
e-09
YEVHDARIPMSTRNP
++++++++ ++
76 LYIVDARDGFSEQDKKIVSQISKRNLGVIFLLNK
Q8SRF4_ENCCU/255-337
LENGTH = 83 COMBINED P-VALUE = 1.84e-04 E-VALUE = 0.13
DIAGRAM: 44-[3]-31
[3]
8.9e-06
WFPGHMAK
++++ +
1 GKSSTINSIMNSKRVKVSQTPGKTKHIQTIQVESGPCLLDCPGLVFPGHDKISLILHGILNVDQLLDLNSSLDYI
Q7VSW8_BORPE/17-154
LENGTH = 138 COMBINED P-VALUE = 4.38e-04 E-VALUE = 0.32
DIAGRAM: 101-[2]-19
[2]
6.7e-08
DCIYEVHDARIPMSTRNP
+ +++ +++++ ++ +
76 RRFLESPEAHRRFEQEARVLRKLLECDAGLYVIDARDPVLGKHRDELAILASCARPLLPVLNF
ENGA_HAEIN/15-121
LENGTH = 107 COMBINED P-VALUE = 5.51e-04 E-VALUE = 0.4
DIAGRAM: 69-[2]-20
[2]
4.0e-0
DCIYEV
++++ +
1 GKSTLFNRLTRTRDALVADFPGLTRDRKYGHAHIAGYDFIVIDTGGIDGTEEGVEEKMAEQSLLAIDEADIVLFL
7
HDARIPMSTRNP
+++++ ++
76 VDARAGLTAADIGIANYLRQRQNKITVVVANK
MNME_THEMA/223-327
LENGTH = 105 COMBINED P-VALUE = 8.41e-04 E-VALUE = 0.61
DIAGRAM: 70-[2]-17
[2]
1.5e-
DCIYE
++++
1 GKSTLLNRLLNEDRAIVTDIPGTTRDVISEEIVIRGILFRIVDTAGVRSETNDLVERLGIERTLQEIEKADIVLF
06
VHDARIPMSTRNP
++++ ++ +
76 VLDASSPLDEEDRKILERIKNKRYLVVINK
ENGA_CHLTE/189-297
LENGTH = 109 COMBINED P-VALUE = 1.52e-03 E-VALUE = 1.1
DIAGRAM: 18-[2]-36-[2]-19
[2] [2]
8.5e-05 2.9
DCIYEVHDARIPMSTRNP DCI
++ +++ + + ++ ++
1 GKSSLVNALLGTERHIVSDVPGTTRDAIDSVLKRNGEEYVLIDTAGLRKRTKIDAGIEFYSSLRTARAIERCDVA
e-05
YEVHDARIPMSTRNP
+ +++++ + +
76 LVLLDARLGLESQDMKIIHMAIERKKGVLILVNK
O22445_PEA/74-172
LENGTH = 99 COMBINED P-VALUE = 1.70e-03 E-VALUE = 1.2
DIAGRAM: 67-[2]-14
[2]
1.1e-05
DCIYEVHD
++++ +++
1 GKSTLLTLLTGTHSEAASYEFTTLTCIPGIIHYNDTKIQLLDLPGIIEGASEGKGRGRQVIAVAKSSDIVLMVLD
ARIPMSTRNP
+ + +
76 ASKSEGHRQILTKELEAVGLRLNK
MNME_HAEIN/226-334
LENGTH = 109 COMBINED P-VALUE = 1.90e-03 E-VALUE = 1.4
DIAGRAM: 69-[2]-22
[2]
2.2e-0
DCIYEV
+ +++
1 GKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLRDAIDEVERIGISRAWTEIEQADRIILM
6
HDARIPMSTRNP
++ ++++ +
76 LDSSDPESADLSKVRSEFLAKLPSTLPVTIVRNK
MNME_PSEPU/228-336
LENGTH = 109 COMBINED P-VALUE = 2.03e-03 E-VALUE = 1.5
DIAGRAM: 69-[2]-22
[2]
2.4e-0
DCIYEV
+ ++++
1 GKSSLLNQLAGREAAIVTDIAGTTRDILREHIHIDGMPLHVVDTAGLRDTDDHVEKIGVERALKAIGEADRVLLV
6
HDARIPMSTRNP
++ +++ +
76 VDSTAPEASDPFALWPEFLAQRPDPAKVTLIRNK
ENGA_ECOL6/14-119
LENGTH = 106 COMBINED P-VALUE = 2.20e-03 E-VALUE = 1.6
DIAGRAM: 69-[2]-19
[2]
2.1e-0
DCIYEV
++++
1 GKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFM
6
HDARIPMSTRNP
+++++ ++
76 VDARAGLMPADEAIAKHLRSREKPTFLVANK
Q81A76_BACCR/209-318
LENGTH = 110 COMBINED P-VALUE = 2.63e-03 E-VALUE = 1.9
DIAGRAM: 69-[2]-23
[2]
7.7e-0
DCIYEV
++++ +
1 GKSTLFNRLTEADTFEENLLFATLDPTTRKMPLPSGYTVLLTDTVGFIQDLPTSLIAAFRSTLEEAGEADVILHV
5
HDARIPMSTRNP
++ ++
76 VDSADPNYIGHEKTVKRLLSELEINHIPIITLYNK
ENGA_BUCAP/14-120
LENGTH = 107 COMBINED P-VALUE = 3.96e-03 E-VALUE = 2.9
DIAGRAM: 70-[2]-19
[2]
2.7e-
DCIYE
++++
1 GKSTLFNILSKTRNALVADYPGLTRDRNYGYCYLKENKKITIVDTAGINFKSQKIEKQSHEQTLKAIKECDGILF
06
VHDARIPMSTRNP
++ +++ + +
76 LVNARDGVMPEEYEISRKIRKYEKKTILVINK
O58859_PYRHO/200-310
LENGTH = 111 COMBINED P-VALUE = 4.47e-03 E-VALUE = 3.2
DIAGRAM: 68-[2]-25
[2]
1.1e-06
DCIYEVH
+++++++
1 GKSTLLNALTGEDIEAKNQMFTTLDTTTRRFKVKGKMLLVTDTVGFIDGLPPFIVEAFHSTLEEIVKADIIILVL
DARIPMSTRNP
++ + +
76 DASEPWKEIRRKLFASLNVLRELKALDRPMIVALNK
MNME_LACPL/236-339
LENGTH = 104 COMBINED P-VALUE = 4.50e-03 E-VALUE = 3.2
DIAGRAM: 69-[2]-17
[2]
4.0e-0
DCIYEV
+ ++++
1 GKSSLLNHLLHEDKAIVTDVAGTTRDVIEEYVNVRGVPLKLVDTAGIRDTEDKVEKIGVERSRKAIGAADLVLLV
6
HDARIPMSTRNP
++ +++ +
76 LDNSQPLTAEDRELLQETDQSKRIVILNK
ENGA_BORPE/16-123
LENGTH = 108 COMBINED P-VALUE = 6.40e-03 E-VALUE = 4.6
DIAGRAM: 70-[2]-20
[2]
2.0e-
DCIYE
++++
1 GKSTLFNRLTRSRAALVADFSGLTRDRHYGEGRVGDTPFLVIDTGGFEPVAKDGILAEMARQTRQAIAEADVVVF
06
VHDARIPMSTRNP
++++++ +
76 LVDARAGVNAHDHEIARLLRKSGQQRVLLAVNK
YG3Y_YEAST/75-173
LENGTH = 99 COMBINED P-VALUE = 6.74e-03 E-VALUE = 4.9
DIAGRAM: 67-[2]-14
[2]
1.3e-05
DCIYEVHD
+ ++ +++
1 GKSSLLGKITTTKSEIAHYAFTTLTSVPGVLKYQGAEIQIVDLPGIIYGASQGKGRGRQVVATARTADLVLMVLD
ARIPMSTRNP
+ + + +
76 ATKSEHQRASLEKELENVGIRLNK
ENGA_CLOPE/188-296
LENGTH = 109 COMBINED P-VALUE = 6.85e-03 E-VALUE = 4.9
DIAGRAM: 109
ENGB_BUCAI/38-146
LENGTH = 109 COMBINED P-VALUE = 6.92e-03 E-VALUE = 5
DIAGRAM: 91-[1]-2
[1]
1.2e-05
VVGMPNVGKSSLINSL
++ + + +++ ++
76 VLLMDIRYPLKKLDQKIISIAVQKKISILVLLTK
MNME_MYCPN/229-332
LENGTH = 104 COMBINED P-VALUE = 7.74e-03 E-VALUE = 5.6
DIAGRAM: 69-[2]-17
[2]
1.4e-0
DCIYEV
++++
1 GKSSLLNALLDQDKAIVSAIKGSTRDIVEGDFALNGHFVKILDTAGIRQHQSALEKAGIQKTFGAIKTANLVIYL
5
HDARIPMSTRNP
++++ ++
76 LDARQPEPDPKIIARLKKLKKDFFLVHNK
ENGA_PSESM/14-119
LENGTH = 106 COMBINED P-VALUE = 7.84e-03 E-VALUE = 5.7
DIAGRAM: 69-[2]-19
[2]
2.8e-0
DCIYEV
++++ +
1 GKSTMFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGISGDEHGMDEKMAEQSLLAIEEADVVLFL
6
HDARIPMSTRNP
+++++ +
76 VDARAGYTAADQMIGEHLRKRNKRSYVVANK
MNME_NITEU/227-331
LENGTH = 105 COMBINED P-VALUE = 8.06e-03 E-VALUE = 5.8
DIAGRAM: 69-[2]-18
[2]
3.9e-0
DCIYEV
+ ++++
1 GKSSLLNRLAGDEVAIVTDIPGTTRDTVRQSIEIEGIPLHLIDTAGLRETSDIVEQHGIARTYAAIEQADLVLLL
5
HDARIPMSTRNP
++ + + +
76 VDSRHGVTEEDRSVLTRLPERLPVLTVHNK
MNME_XANCP/228-331
LENGTH = 104 COMBINED P-VALUE = 8.42e-03 E-VALUE = 6.1
DIAGRAM: 69-[2]-17
[2]
6.1e-0
DCIYEV
+ + +
1 GKSSLLNALAGSDRAIVTDVAGTTRDTLHEAIQLDGFELTLVDTAGLREGGDAIEREGMRRARAELQRADLALIV
6
HDARIPMSTRNP
++++++ +
76 LDARDPQAARDALGDAIDAVPRRLWIHNK
ENGA_RHOBA/15-121
LENGTH = 107 COMBINED P-VALUE = 8.44e-03 E-VALUE = 6.1
DIAGRAM: 70-[2]-19
[2]
3.7e-
DCIYE
+++++
1 GKSSLFNWLARRRLAIVDNFEGVTRDRMTTLIESDDQFFELIDTGGMGVEDADDLTSDVRRQIDMAIASADVILL
05
VHDARIPMSTRNP
+++ ++
76 VVDVQTGLMPLDEEVVERLRGVERPVILVANK
ENGA_COXBU/187-295
LENGTH = 109 COMBINED P-VALUE = 8.77e-03 E-VALUE = 6.3
DIAGRAM: 72-[2]-19
[2]
1.9
DCI
+++
1 GKSTLINRLLGEERVIVYDQPGTTRDSIYIPFARNDENYTLIDTAGIRRRAKIQDYVEKFSMIKSLQAMHAADVV
e-05
YEVHDARIPMSTRNP
+ +++++ +
76 IFLLDARQGVTEQDLRLLNRIVEAGVSLIIAVNK
Q8H1F6_ARATH/225-341
LENGTH = 117 COMBINED P-VALUE = 8.93e-03 E-VALUE = 6.4
DIAGRAM: 117
ENGA_BUCBP/212-320
LENGTH = 109 COMBINED P-VALUE = 9.22e-03 E-VALUE = 6.6
DIAGRAM: 72-[2]-19
[2]
2.5
DCI
++
1 GKSTLINVLLNEKRVIVDSNPGTTRDSNWSLIIRNKINYMFFDTAGIRKKNKISTYIEKISVHKTLKILNLVHVV
e-05
YEVHDARIPMSTRNP
+++ ++ + ++
76 LLVIDAMDGFSDQDFYLLNLIIKNGCSVIIILNK
O26315_METTH/19-121
LENGTH = 103 COMBINED P-VALUE = 9.45e-03 E-VALUE = 6.8
DIAGRAM: 68-[2]-17
[2]
9.9e-05
DCIYEVH
++++ ++
1 GKSVIFNQLTGSNQIVGNWPGKTVERAEGYLKFQGRDIHIIDLPGIYSFSTYSMEEIVSRDFIINEGPDVVINVL
DARIPMSTRNP
++ +
76 DASVLERNLFFTLQLMEMEVPMVICINQ
OBG_BORBU/172-281
LENGTH = 110 COMBINED P-VALUE = 1.02e-02 E-VALUE = 7.4
DIAGRAM: 110
MNME_CYACA/233-338
LENGTH = 106 COMBINED P-VALUE = 1.06e-02 E-VALUE = 7.7
DIAGRAM: 69-[2]-19
[2]
3.1e-0
DCIYEV
++ +
1 GKSSLLNAIAKRECSIVTNFPGTTRDIVSFETMLGNTLVRLYDTAGIRQSVDEIEKIGISKTELFVDECQIVFFV
5
HDARIPMSTRNP
+++ +++ +
76 LDAIQGLSSEDSVIFNKLNLMNKNFVILINK
Q9HMS4_HALSA/45-179
LENGTH = 135 COMBINED P-VALUE = 1.10e-02 E-VALUE = 7.9
DIAGRAM: 97-[2]-20
[2]
1.2e-05
DCIYEVHDARIPMSTRNP
+++++++++ +
76 VRRSREATEGVAEAMHWLREDVDGVIYVLDATNDPFTQVNTMLIGIIESRDLPVLILANK
ERA_THEMA/17-122
LENGTH = 106 COMBINED P-VALUE = 1.12e-02 E-VALUE = 8
DIAGRAM: 106
ERA_DEIRA/29-134
LENGTH = 106 COMBINED P-VALUE = 1.24e-02 E-VALUE = 8.9
DIAGRAM: 69-[2]-19
[2]
8.8e-0
DCIYEV
+ ++ +
1 GKSTLLNAFLGTKVAPTSPRPQTTRRGVRGIYTLDNRQLIFVDTPGLHKPKDALGKYMNSEVHSALSDVDAVVWV
6
HDARIPMSTRNP
++ + + + +
76 VDLRHPPTDEDRLVANSVRDLPKPLFLVGNK
MNME_WIGBR/228-334
LENGTH = 107 COMBINED P-VALUE = 1.26e-02 E-VALUE = 9.1
DIAGRAM: 107
Q8SYD1_DROME/307-427
LENGTH = 121 COMBINED P-VALUE = 1.26e-02 E-VALUE = 9.1
DIAGRAM: 121
ENGA_BRAJA/14-120
LENGTH = 107 COMBINED P-VALUE = 1.28e-02 E-VALUE = 9.2
DIAGRAM: 70-[2]-19
[2]
1.0e-
DCIYE
+
1 GKSTLFNRLVGQKLALVDDLPGVTRDRREGEARLGDLEFTIIDTAGLDEGAKGSLTARMQEQTEAAIAQADALFF
05
VHDARIPMSTRNP
++++++ ++ +
76 VVDARIGLTPTDRAFADFARRANKPVLLVANK
ENGA_NITEU/14-120
LENGTH = 107 COMBINED P-VALUE = 1.36e-02 E-VALUE = 9.8
DIAGRAM: 107
Debugging Information
CPU: kodomo
Time 0.008000 secs.
mast ./memeout.txt -d ./PF01926_seed.fasta -ev 10.000000 -mt 0.000100
Button Help
Links to Entrez database at NCBI
Links to sequence scores (section I)
Links to motif diagrams (section II)
Links to sequence/motif annotated alignments (section III)
This information