FastQCFastQC Report
Пн 8 дек 2014
Ath_tae_CTTGTA_L003_R2_007_out_x.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameAth_tae_CTTGTA_L003_R2_007_out_x.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3872176
Sequences flagged as poor quality0
Sequence length50-101
%GC35

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCGGCC2901.1823904E-610.49829924-25
GCGGCCG3702.7340502E-68.85986226-27
CGGCCGC3854.2973552E-57.906481326-27
GGCCGCG3050.00229402967.67547828-29
TATCGCG4453.2278378E-57.36762622-23
TCGCGGC4107.565533E-46.85442424-25
GCCGCGT4400.00169149116.38460228-29
GGCTGCA10250.00141409555.94299654
CATGAGC13800.00160078395.0907219
Produced by FastQC (version 0.11.2)