BLASTN 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= L19201 L19201.1 E. coli chromosomal region from 87.2 to 89.2 minutes. (1332 letters) Database: st_pm_xc 884 sequences; 12,243,887 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AE008891 AE006468 |AE008891| Salmonella typhimurium LT2, section... 1292 0.0 AE012469 AE008922 |AE012469| Xanthomonas campestris pv. campestr... 107 7e-23 embl|AE006212|AE006212 Pasteurella multocida subsp. multocida st... 74 1e-12 AE012434 AE008922 |AE012434| Xanthomonas campestris pv. campestr... 36 0.21 AE012113 AE008922 |AE012113| Xanthomonas campestris pv. campestr... 36 0.21 AE008751 AE006468 |AE008751| Salmonella typhimurium LT2, section... 36 0.21 AE012489 AE008922 |AE012489| Xanthomonas campestris pv. campestr... 34 0.82 AE012397 AE008922 |AE012397| Xanthomonas campestris pv. campestr... 34 0.82 AE012206 AE008922 |AE012206| Xanthomonas campestris pv. campestr... 34 0.82 AE012142 AE008922 |AE012142| Xanthomonas campestris pv. campestr... 34 0.82 AE012093 AE008922 |AE012093| Xanthomonas campestris pv. campestr... 34 0.82 AE008900 AE006468 |AE008900| Salmonella typhimurium LT2, section... 34 0.82 AE008878 AE006468 |AE008878| Salmonella typhimurium LT2, section... 34 0.82 AE008707 AE006468 |AE008707| Salmonella typhimurium LT2, section... 34 0.82 AE012550 AE008922 |AE012550| Xanthomonas campestris pv. campestr... 32 3.2 AE012546 AE008922 |AE012546| Xanthomonas campestris pv. campestr... 32 3.2 AE012521 AE008922 |AE012521| Xanthomonas campestris pv. campestr... 32 3.2 AE012517 AE008922 |AE012517| Xanthomonas campestris pv. campestr... 32 3.2 AE012515 AE008922 |AE012515| Xanthomonas campestris pv. campestr... 32 3.2 AE012333 AE008922 |AE012333| Xanthomonas campestris pv. campestr... 32 3.2 AE012311 AE008922 |AE012311| Xanthomonas campestris pv. campestr... 32 3.2 AE012292 AE008922 |AE012292| Xanthomonas campestris pv. campestr... 32 3.2 AE012238 AE008922 |AE012238| Xanthomonas campestris pv. campestr... 32 3.2 AE012135 AE008922 |AE012135| Xanthomonas campestris pv. campestr... 32 3.2 AE012103 AE008922 |AE012103| Xanthomonas campestris pv. campestr... 32 3.2 AE008905 AE006468 |AE008905| Salmonella typhimurium LT2, section... 32 3.2 AE008882 AE006468 |AE008882| Salmonella typhimurium LT2, section... 32 3.2 AE008880 AE006468 |AE008880| Salmonella typhimurium LT2, section... 32 3.2 AE008861 AE006468 |AE008861| Salmonella typhimurium LT2, section... 32 3.2 AE008788 AE006468 |AE008788| Salmonella typhimurium LT2, section... 32 3.2 AE008746 AE006468 |AE008746| Salmonella typhimurium LT2, section... 32 3.2 AE008737 AE006468 AE008738-AE008739 |AE008737| Salmonella typhim... 32 3.2 AE008732 AE006468 |AE008732| Salmonella typhimurium LT2, section... 32 3.2 >AE008891 AE006468 |AE008891| Salmonella typhimurium LT2, section 195 of 220 of the complete genome. Length = 25646 Score = 1292 bits (652), Expect = 0.0 Identities = 1162/1332 (87%) Strand = Plus / Minus Query: 1 atgtctgaaatgaccccacgcgaaatcgtcagcgaactggataagcacatcatcggccag 60 |||||||||||||||||||||||||| |||||||||||| | || ||||| ||||||||| Sbjct: 3521 atgtctgaaatgaccccacgcgaaattgtcagcgaactgaacaaacacattatcggccag 3462 Query: 61 gacaacgccaagcgttctgtggcgattgctctgcgtaaccgctggcgtcgcatgcagctc 120 || ||||| |||||||| ||||||||||| ||||||||||||||||||| |||||||| Sbjct: 3461 gataacgcaaagcgttccgtggcgattgcattgcgtaaccgctggcgtcgtatgcagctt 3402 Query: 121 aacgaagagctgcgccatgaagtgaccccgaaaaatatcctgatgatcggcccgaccggt 180 | |||||||||||||| ||||| || ||||||||||| |||||||| ||||||||||| Sbjct: 3401 gatgaagagctgcgccacgaagtaacgccgaaaaatattctgatgattggcccgaccggc 3342 Query: 181 gtcggtaaaactgaaatcgcccgtcgtctggctaagctggcgaatgcgccgttcatcaaa 240 ||||||||||| |||||||||||||||||||| || || || || ||||||||||| ||| Sbjct: 3341 gtcggtaaaaccgaaatcgcccgtcgtctggcaaaactcgccaacgcgccgttcattaaa 3282 Query: 241 gttgaagcgaccaaattcaccgaagtgggctacgtcggtaaggaagtggattctattatt 300 || ||||| ||||||||||||||||||||||| ||||| || |||||||| ||||| || Sbjct: 3281 gtcgaagccaccaaattcaccgaagtgggctatgtcgggaaagaagtggactctatcatc 3222 Query: 301 cgcgatctgaccgatgccgccgtgaaaatggtacgcgtccaggctatcgagaaaaaccgt 360 |||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||| Sbjct: 3221 cgcgatctgaccgatgccgcggtgaaaatggttcgcgtacaggctatcgagaaaaaccgc 3162 Query: 361 tatcgcgctgaagaactggcagaagaacgtattctcgacgtgctgatcccacctgctaaa 420 ||||| || ||||| |||| |||||||||||||||||||| ||||||||||| || ||| Sbjct: 3161 tatcgtgcggaagagttggcggaagaacgtattctcgacgtactgatcccacccgcaaaa 3102 Query: 421 aacaactggggacagaccgaacagcagcaggaaccgtccgctgctcgtcaggcattccgc 480 || |||||||| ||| |||||||||||||||| || || || || ||||| | |||||| Sbjct: 3101 aataactggggccaggccgaacagcagcaggagccttctgccgcccgtcaaacgttccgc 3042 Query: 481 aaaaaactgcgtgaaggccagcttgatgacaaagaaatcgagatcgatcttgccgcagca 540 ||||||||||| ||||||||||| || || ||||| |||||||| | || ||||| || Sbjct: 3041 aaaaaactgcgcgaaggccagctcgacgataaagagatcgagattaacctcgccgccgcg 2982 Query: 541 ccgatgggcgttgaaattatggctcctccgggcatggaagagatgaccagccagctgcag 600 ||||||||||| || |||||||| |||||||||||||||||||||||||||||| ||||| Sbjct: 2981 ccgatgggcgtagagattatggcgcctccgggcatggaagagatgaccagccagttgcag 2922 Query: 601 tccatgttccagaacctgggcggccagaagcaaaaagcgcgtaagctgaaaatcaaagac 660 || |||||||||||||||||||| ||||| || ||| |||||||||||||||| |||||| Sbjct: 2921 tctatgttccagaacctgggcggtcagaaacagaaaccgcgtaagctgaaaattaaagac 2862 Query: 661 gccatgaagctgctgattgaagaagaagcggcgaaactggtgaacccggaagagctgaag 720 || ||||| ||| || |||||||||| || || |||||||| ||||||||||||||||| Sbjct: 2861 gcgatgaaactgttggttgaagaagaggctgctaaactggtcaacccggaagagctgaaa 2802 Query: 721 caagacgctatcgacgctgttgagcagcacgggatcgtgtttatcgacgaaatcgacaaa 780 || |||||||||||||| ||||| |||||||| |||||||||||||| ||||| |||||| Sbjct: 2801 caggacgctatcgacgcggttgaacagcacggcatcgtgtttatcgatgaaattgacaaa 2742 Query: 781 atctgtaagcgcggcgagtcttccggtccggatgtttctcgtgaaggcgttcagcgtgac 840 || |||||||| ||||| | ||||| ||||||||||| || |||||||| ||||| ||| Sbjct: 2741 atttgtaagcgtggcgaaacctccggcccggatgtttcacgcgaaggcgtacagcgcgac 2682 Query: 841 ctgctgccgctggtagaaggttgcaccgtttccaccaaacacgggatggtcaaaactgac 900 | ||||||||||||||||| ||||| ||||| ||||||||||||||||||||||| || Sbjct: 2681 ttactgccgctggtagaaggctgcacggtttcgaccaaacacgggatggtcaaaacggat 2622 Query: 901 cacattctgtttatcgcttctggcgcgttccagattgcgaaaccgtctgacctgatcccg 960 || |||||||||||||| ||||||||||||||| | ||||| |||||||| ||||||||| Sbjct: 2621 catattctgtttatcgcctctggcgcgttccaggtggcgaagccgtctgatctgatcccg 2562 Query: 961 gaactgcaaggtcgtctgccaatccgcgttgaactgcaggcgctgaccaccagcgacttc 1020 |||||||| || |||||||| || ||||||||||| |||||||||||||||||||| ||| Sbjct: 2561 gaactgcagggccgtctgccgattcgcgttgaacttcaggcgctgaccaccagcgatttc 2502 Query: 1021 gagcgtattctgaccgagccgaatgcctctatcaccgtgcagtacaaagcactgatggcg 1080 || || ||| |||||||||| || ||||| ||||||||||||| ||||| |||||||| Sbjct: 2501 gaacgcattttgaccgagccaaacgcctccgtcaccgtgcagtataaagcgctgatggca 2442 Query: 1081 actgaaggcgtaaatatcgagtttaccgactccggtattaaacgcatcgcggaagcggca 1140 ||||||||||| ||||||||||| ||||| |||||||||||||| || || ||||| || Sbjct: 2441 actgaaggcgtcaatatcgagttcaccgattccggtattaaacgtattgccgaagccgcc 2382 Query: 1141 tggcaggtgaacgaatctaccgaaaacatcggtgctcgtcgtttacacactgttctggag 1200 |||||||| |||||| | |||||||||||||| || || ||| | || || || |||||| Sbjct: 2381 tggcaggttaacgaaaccaccgaaaacatcggcgcgcgccgtctgcataccgtactggag 2322 Query: 1201 cgtttaatggaagagatttcctacgacgccagcgatttaagcggtcaaaatatcactatt 1260 ||| | ||||||||||||||||| ||||||||||| | ||| ||||| ||||| ||| Sbjct: 2321 cgtctgatggaagagatttcctataacgccagcgatctgcacggccaaaacatcacaatt 2262 Query: 1261 gacgcagattatgtgagcaaacatctggatgcgttggtggcagatgaagatctgagccgt 1320 || || || |||||||||||||||||||||||| |||| |||||||||||||| |||||| Sbjct: 2261 gatgcggaatatgtgagcaaacatctggatgcgctggtcgcagatgaagatctaagccgt 2202 Query: 1321 tttatcctataa 1332 |||||| ||||| Sbjct: 2201 tttatcttataa 2190 >AE012469 AE008922 |AE012469| Xanthomonas campestris pv. campestris str. ATCC 33913, section 377 of 460 of the complete genome. Length = 10901 Score = 107 bits (54), Expect = 7e-23 Identities = 192/238 (80%) Strand = Plus / Minus Query: 53 tcggccaggacaacgccaagcgttctgtggcgattgctctgcgtaaccgctggcgtcgca 112 |||||||| || | ||||||||| | ||||| ||||| ||||| || |||||||| |||| Sbjct: 1997 tcggccagcacgatgccaagcgtgcggtggccattgcgctgcgcaatcgctggcggcgca 1938 Query: 113 tgcagctcaacgaagagctgcgccatgaagtgaccccgaaaaatatcctgatgatcggcc 172 ||||| | ||||| ||||| | ||||||| || || || |||||||||||||||| Sbjct: 1937 tgcagttgccggaagaattgcgcaacgaagtgatgcccaagaacatcctgatgatcggcc 1878 Query: 173 cgaccggtgtcggtaaaactgaaatcgcccgtcgtctggctaagctggcgaatgcgccgt 232 | ||||| || || || || || ||||| || |||||||| | |||||| |||||||||| Sbjct: 1877 ccaccggcgtgggcaagaccgagatcgcgcggcgtctggccacgctggccaatgcgccgt 1818 Query: 233 tcatcaaagttgaagcgaccaaattcaccgaagtgggctacgtcggtaaggaagtgga 290 || |||| || ||||| || ||||||||||||||||||||||| ||||| ||||| Sbjct: 1817 tcgtcaaggtggaagccacgcgtttcaccgaagtgggctacgtcggcaaggatgtgga 1760 Score = 77.8 bits (39), Expect = 6e-14 Identities = 90/107 (84%) Strand = Plus / Minus Query: 826 ggcgttcagcgtgacctgctgccgctggtagaaggttgcaccgtttccaccaaacacggg 885 ||||| ||||| || |||||||||||||| ||||||| || ||| |||||||| |||| Sbjct: 1203 ggcgtgcagcgcgatctgctgccgctggtggaaggttccaacgtgtccaccaagtacggc 1144 Query: 886 atggtcaaaactgaccacattctgtttatcgcttctggcgcgttcca 932 | |||||| || |||||||| ||||| || ||||| ||||||||||| Sbjct: 1143 acggtcaagaccgaccacatcctgttcattgcttcgggcgcgttcca 1097 Score = 52.0 bits (26), Expect = 3e-06 Identities = 35/38 (92%) Strand = Plus / Minus Query: 742 gagcagcacgggatcgtgtttatcgacgaaatcgacaa 779 ||||||||||| |||||||| |||||||| |||||||| Sbjct: 1293 gagcagcacggcatcgtgttcatcgacgagatcgacaa 1256 >embl|AE006212|AE006212 Pasteurella multocida subsp. multocida str. Pm70 section 179 of 204 of the complete genome. Length = 13738 Score = 73.8 bits (37), Expect = 1e-12 Identities = 94/113 (83%) Strand = Plus / Minus Query: 475 ttccgcaaaaaactgcgtgaaggccagcttgatgacaaagaaatcgagatcgatcttgcc 534 |||||||||||| |||||||||| || | ||||||||||||||||| || ||| | || Sbjct: 3950 ttccgcaaaaaattgcgtgaagggcaattagatgacaaagaaatcgacattgatgtcgct 3891 Query: 535 gcagcaccgatgggcgttgaaattatggctcctccgggcatggaagagatgac 587 ||| | | ||||| || ||||||||||| || |||||||||||||| ||||| Sbjct: 3890 gcaccgtctatgggggtggaaattatggcgccgccgggcatggaagaaatgac 3838 Score = 73.8 bits (37), Expect = 1e-12 Identities = 94/113 (83%) Strand = Plus / Minus Query: 187 aaaactgaaatcgcccgtcgtctggctaagctggcgaatgcgccgttcatcaaagttgaa 246 ||||| ||||| ||||||||| | || || || || |||||||| || || ||||| ||| Sbjct: 4238 aaaacggaaattgcccgtcgtttagccaaactcgccaatgcgccttttattaaagtggaa 4179 Query: 247 gcgaccaaattcaccgaagtgggctacgtcggtaaggaagtggattctattat 299 || |||||||| |||||||||||||| ||||| || || |||||||| ||||| Sbjct: 4178 gccaccaaatttaccgaagtgggctatgtcgggaaagaggtggattcgattat 4126 Score = 58.0 bits (29), Expect = 6e-08 Identities = 47/53 (88%) Strand = Plus / Minus Query: 1159 accgaaaacatcggtgctcgtcgtttacacactgttctggagcgtttaatgga 1211 ||||||||||||||||| || ||||||||||| || ||||||| |||||||| Sbjct: 3266 accgaaaacatcggtgcgcgccgtttacacacggtgatggagcgcttaatgga 3214 Score = 36.2 bits (18), Expect = 0.21 Identities = 18/18 (100%) Strand = Plus / Minus Query: 772 atcgacaaaatctgtaag 789 |||||||||||||||||| Sbjct: 3653 atcgacaaaatctgtaag 3636 Score = 36.2 bits (18), Expect = 0.21 Identities = 18/18 (100%) Strand = Plus / Minus Query: 1 atgtctgaaatgacccca 18 |||||||||||||||||| Sbjct: 4424 atgtctgaaatgacccca 4407 Score = 34.2 bits (17), Expect = 0.82 Identities = 26/29 (89%) Strand = Plus / Minus Query: 811 gatgtttctcgtgaaggcgttcagcgtga 839 ||||| || |||||||| ||||||||||| Sbjct: 3614 gatgtctcgcgtgaaggggttcagcgtga 3586 >AE012434 AE008922 |AE012434| Xanthomonas campestris pv. campestris str. ATCC 33913, section 342 of 460 of the complete genome. Length = 10411 Score = 36.2 bits (18), Expect = 0.21 Identities = 18/18 (100%) Strand = Plus / Plus Query: 157 atcctgatgatcggcccg 174 |||||||||||||||||| Sbjct: 1533 atcctgatgatcggcccg 1550 >AE012113 AE008922 |AE012113| Xanthomonas campestris pv. campestris str. ATCC 33913, section 21 of 460 of the complete genome. Length = 11218 Score = 36.2 bits (18), Expect = 0.21 Identities = 18/18 (100%) Strand = Plus / Minus Query: 605 tgttccagaacctgggcg 622 |||||||||||||||||| Sbjct: 2285 tgttccagaacctgggcg 2268 >AE008751 AE006468 |AE008751| Salmonella typhimurium LT2, section 55 of 220 of the complete genome. Length = 20753 Score = 36.2 bits (18), Expect = 0.21 Identities = 18/18 (100%) Strand = Plus / Minus Query: 673 ctgattgaagaagaagcg 690 |||||||||||||||||| Sbjct: 13734 ctgattgaagaagaagcg 13717 >AE012489 AE008922 |AE012489| Xanthomonas campestris pv. campestris str. ATCC 33913, section 397 of 460 of the complete genome. Length = 10504 Score = 34.2 bits (17), Expect = 0.82 Identities = 17/17 (100%) Strand = Plus / Minus Query: 117 gctcaacgaagagctgc 133 ||||||||||||||||| Sbjct: 8302 gctcaacgaagagctgc 8286 >AE012397 AE008922 |AE012397| Xanthomonas campestris pv. campestris str. ATCC 33913, section 305 of 460 of the complete genome. Length = 12374 Score = 34.2 bits (17), Expect = 0.82 Identities = 17/17 (100%) Strand = Plus / Minus Query: 999 ggcgctgaccaccagcg 1015 ||||||||||||||||| Sbjct: 10430 ggcgctgaccaccagcg 10414 >AE012206 AE008922 |AE012206| Xanthomonas campestris pv. campestris str. ATCC 33913, section 114 of 460 of the complete genome. Length = 8916 Score = 34.2 bits (17), Expect = 0.82 Identities = 20/21 (95%) Strand = Plus / Minus Query: 995 tgcaggcgctgaccaccagcg 1015 ||||||||||| ||||||||| Sbjct: 878 tgcaggcgctggccaccagcg 858 >AE012142 AE008922 |AE012142| Xanthomonas campestris pv. campestris str. ATCC 33913, section 50 of 460 of the complete genome. Length = 10036 Score = 34.2 bits (17), Expect = 0.82 Identities = 17/17 (100%) Strand = Plus / Minus Query: 918 ttctggcgcgttccaga 934 ||||||||||||||||| Sbjct: 1542 ttctggcgcgttccaga 1526 >AE012093 AE008922 |AE012093| Xanthomonas campestris pv. campestris str. ATCC 33913, section 1 of 460 of the complete genome. Length = 10511 Score = 34.2 bits (17), Expect = 0.82 Identities = 17/17 (100%) Strand = Plus / Minus Query: 362 atcgcgctgaagaactg 378 ||||||||||||||||| Sbjct: 595 atcgcgctgaagaactg 579 >AE008900 AE006468 |AE008900| Salmonella typhimurium LT2, section 204 of 220 of the complete genome. Length = 21498 Score = 34.2 bits (17), Expect = 0.82 Identities = 17/17 (100%) Strand = Plus / Minus Query: 887 tggtcaaaactgaccac 903 ||||||||||||||||| Sbjct: 10434 tggtcaaaactgaccac 10418 >AE008878 AE006468 |AE008878| Salmonella typhimurium LT2, section 182 of 220 of the complete genome. Length = 22418 Score = 34.2 bits (17), Expect = 0.82 Identities = 17/17 (100%) Strand = Plus / Plus Query: 27 cgtcagcgaactggata 43 ||||||||||||||||| Sbjct: 7540 cgtcagcgaactggata 7556 >AE008707 AE006468 |AE008707| Salmonella typhimurium LT2, section 15 of 220 of the complete genome. Length = 22026 Score = 34.2 bits (17), Expect = 0.82 Identities = 20/21 (95%) Strand = Plus / Plus Query: 176 ccggtgtcggtaaaactgaaa 196 |||||||||||||||| |||| Sbjct: 11757 ccggtgtcggtaaaaccgaaa 11777 Score = 32.2 bits (16), Expect = 3.2 Identities = 16/16 (100%) Strand = Plus / Plus Query: 216 gctggcgaatgcgccg 231 |||||||||||||||| Sbjct: 13111 gctggcgaatgcgccg 13126 >AE012550 AE008922 |AE012550| Xanthomonas campestris pv. campestris str. ATCC 33913, section 458 of 460 of the complete genome. Length = 11023 Score = 32.2 bits (16), Expect = 3.2 Identities = 16/16 (100%) Strand = Plus / Minus Query: 164 tgatcggcccgaccgg 179 |||||||||||||||| Sbjct: 1959 tgatcggcccgaccgg 1944 >AE012546 AE008922 |AE012546| Xanthomonas campestris pv. campestris str. ATCC 33913, section 454 of 460 of the complete genome. Length = 11417 Score = 32.2 bits (16), Expect = 3.2 Identities = 16/16 (100%) Strand = Plus / Minus Query: 991 gaactgcaggcgctga 1006 |||||||||||||||| Sbjct: 4173 gaactgcaggcgctga 4158 >AE012521 AE008922 |AE012521| Xanthomonas campestris pv. campestris str. ATCC 33913, section 429 of 460 of the complete genome. Length = 10637 Score = 32.2 bits (16), Expect = 3.2 Identities = 16/16 (100%) Strand = Plus / Minus Query: 1284 tctggatgcgttggtg 1299 |||||||||||||||| Sbjct: 8863 tctggatgcgttggtg 8848 >AE012517 AE008922 |AE012517| Xanthomonas campestris pv. campestris str. ATCC 33913, section 425 of 460 of the complete genome. Length = 13773 Score = 32.2 bits (16), Expect = 3.2 Identities = 19/20 (95%) Strand = Plus / Minus Query: 605 tgttccagaacctgggcggc 624 |||||||| ||||||||||| Sbjct: 7017 tgttccagcacctgggcggc 6998 >AE012515 AE008922 |AE012515| Xanthomonas campestris pv. campestris str. ATCC 33913, section 423 of 460 of the complete genome. Length = 10679 Score = 32.2 bits (16), Expect = 3.2 Identities = 16/16 (100%) Strand = Plus / Minus Query: 838 gacctgctgccgctgg 853 |||||||||||||||| Sbjct: 6146 gacctgctgccgctgg 6131 >AE012333 AE008922 |AE012333| Xanthomonas campestris pv. campestris str. ATCC 33913, section 241 of 460 of the complete genome. Length = 11004 Score = 32.2 bits (16), Expect = 3.2 Identities = 16/16 (100%) Strand = Plus / Minus Query: 436 accgaacagcagcagg 451 |||||||||||||||| Sbjct: 7180 accgaacagcagcagg 7165 >AE012311 AE008922 |AE012311| Xanthomonas campestris pv. campestris str. ATCC 33913, section 219 of 460 of the complete genome. Length = 5810 Score = 32.2 bits (16), Expect = 3.2 Identities = 16/16 (100%) Strand = Plus / Plus Query: 50 tcatcggccaggacaa 65 |||||||||||||||| Sbjct: 4972 tcatcggccaggacaa 4987 >AE012292 AE008922 |AE012292| Xanthomonas campestris pv. campestris str. ATCC 33913, section 200 of 460 of the complete genome. Length = 11058 Score = 32.2 bits (16), Expect = 3.2 Identities = 16/16 (100%) Strand = Plus / Minus Query: 996 gcaggcgctgaccacc 1011 |||||||||||||||| Sbjct: 5907 gcaggcgctgaccacc 5892 >AE012238 AE008922 |AE012238| Xanthomonas campestris pv. campestris str. ATCC 33913, section 146 of 460 of the complete genome. Length = 11884 Score = 32.2 bits (16), Expect = 3.2 Identities = 16/16 (100%) Strand = Plus / Minus Query: 609 ccagaacctgggcggc 624 |||||||||||||||| Sbjct: 8167 ccagaacctgggcggc 8152 >AE012135 AE008922 |AE012135| Xanthomonas campestris pv. campestris str. ATCC 33913, section 43 of 460 of the complete genome. Length = 10978 Score = 32.2 bits (16), Expect = 3.2 Identities = 16/16 (100%) Strand = Plus / Plus Query: 1029 tctgaccgagccgaat 1044 |||||||||||||||| Sbjct: 4878 tctgaccgagccgaat 4893 >AE012103 AE008922 |AE012103| Xanthomonas campestris pv. campestris str. ATCC 33913, section 11 of 460 of the complete genome. Length = 10696 Score = 32.2 bits (16), Expect = 3.2 Identities = 16/16 (100%) Strand = Plus / Plus Query: 438 cgaacagcagcaggaa 453 |||||||||||||||| Sbjct: 10245 cgaacagcagcaggaa 10260 >AE008905 AE006468 |AE008905| Salmonella typhimurium LT2, section 209 of 220 of the complete genome. Length = 23427 Score = 32.2 bits (16), Expect = 3.2 Identities = 16/16 (100%) Strand = Plus / Minus Query: 1125 catcgcggaagcggca 1140 |||||||||||||||| Sbjct: 22201 catcgcggaagcggca 22186 >AE008882 AE006468 |AE008882| Salmonella typhimurium LT2, section 186 of 220 of the complete genome. Length = 20107 Score = 32.2 bits (16), Expect = 3.2 Identities = 16/16 (100%) Strand = Plus / Plus Query: 410 cacctgctaaaaacaa 425 |||||||||||||||| Sbjct: 10116 cacctgctaaaaacaa 10131 >AE008880 AE006468 |AE008880| Salmonella typhimurium LT2, section 184 of 220 of the complete genome. Length = 20518 Score = 32.2 bits (16), Expect = 3.2 Identities = 16/16 (100%) Strand = Plus / Minus Query: 613 aacctgggcggccaga 628 |||||||||||||||| Sbjct: 1640 aacctgggcggccaga 1625 >AE008861 AE006468 |AE008861| Salmonella typhimurium LT2, section 165 of 220 of the complete genome. Length = 20281 Score = 32.2 bits (16), Expect = 3.2 Identities = 16/16 (100%) Strand = Plus / Plus Query: 299 ttcgcgatctgaccga 314 |||||||||||||||| Sbjct: 13643 ttcgcgatctgaccga 13658 >AE008788 AE006468 |AE008788| Salmonella typhimurium LT2, section 92 of 220 of the complete genome. Length = 23670 Score = 32.2 bits (16), Expect = 3.2 Identities = 16/16 (100%) Strand = Plus / Plus Query: 1276 agcaaacatctggatg 1291 |||||||||||||||| Sbjct: 8631 agcaaacatctggatg 8646 >AE008746 AE006468 |AE008746| Salmonella typhimurium LT2, section 50 of 220 of the complete genome. Length = 22288 Score = 32.2 bits (16), Expect = 3.2 Identities = 19/20 (95%) Strand = Plus / Minus Query: 368 ctgaagaactggcagaagaa 387 ||||||||||| |||||||| Sbjct: 15748 ctgaagaactgacagaagaa 15729 >AE008737 AE006468 AE008738-AE008739 |AE008737| Salmonella typhimurium LT2, section 45 of 220 of the complete genome. Length = 65219 Score = 32.2 bits (16), Expect = 3.2 Identities = 19/20 (95%) Strand = Plus / Minus Query: 840 cctgctgccgctggtagaag 859 ||||||||||||||| |||| Sbjct: 61369 cctgctgccgctggtggaag 61350 >AE008732 AE006468 |AE008732| Salmonella typhimurium LT2, section 40 of 220 of the complete genome. Length = 22407 Score = 32.2 bits (16), Expect = 3.2 Identities = 16/16 (100%) Strand = Plus / Plus Query: 1198 gagcgtttaatggaag 1213 |||||||||||||||| Sbjct: 18703 gagcgtttaatggaag 18718 Database: st_pm_xc Posted date: Oct 8, 2007 2:46 AM Number of letters in database: 12,243,887 Number of sequences in database: 884 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 884 Number of Hits to DB: 206,233 Number of extensions: 12977 Number of successful extensions: 119 Number of sequences better than 10.0: 33 Number of HSP's gapped: 117 Number of HSP's successfully gapped: 41 Length of query: 1332 Length of database: 12,243,887 Length adjustment: 17 Effective length of query: 1315 Effective length of database: 12,228,859 Effective search space: 16080949585 Effective search space used: 16080949585 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits) S2: 16 (32.2 bits)