BLASTN 2.13.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: GCF_018350155.1_O.geoffroyi_Oge1_pat1.0_genomic.fna 47 sequences; 2,426,387,554 total letters Query= CP014225.1:2234710-2237641|23S_rRNA|Escherichia coli str. K-12 substr. MG1655 strain K-12 Length=2932 Score E Sequences producing significant alignments: (Bits) Value NC_059330.1 Leopardus geoffroyi isolate Oge1 chromosome E1, O.geo... 96.9 5e-17 NC_028320.1 Leopardus geoffroyi isolate OGE mitochondrion, comple... 48.2 0.022 NC_059343.1 Leopardus geoffroyi isolate Oge1 chromosome X, O.geof... 47.3 0.077 NC_059327.1 Leopardus geoffroyi isolate Oge1 chromosome B1, O.geo... 47.3 0.077 NC_059326.1 Leopardus geoffroyi isolate Oge1 chromosome A1, O.geo... 47.3 0.077 NC_059334.1 Leopardus geoffroyi isolate Oge1 chromosome D2, O.geo... 46.4 0.077 NC_059342.1 Leopardus geoffroyi isolate Oge1 chromosome D4, O.geo... 45.5 0.27 NC_059338.1 Leopardus geoffroyi isolate Oge1 chromosome C3, O.geo... 43.7 0.94 NC_059332.1 Leopardus geoffroyi isolate Oge1 chromosome B2, O.geo... 42.8 0.94 >NC_059330.1 Leopardus geoffroyi isolate Oge1 chromosome E1, O.geoffroyi_Oge1_pat1.0, whole genome shotgun sequence Length=61591894 Score = 96.9 bits (106), Expect = 5e-17 Identities = 128/175 (73%), Gaps = 6/175 (3%) Strand=Plus/Plus Query 2442 AAAAGGTACTCCGGGGATAACAGGCTGATACCGCCCAAGAGTTCATATCGACGGCGGTGT 2501 ||||| ||| | |||||||| |||| | || ||||| ||||||| ||||| || | | Sbjct 12785043 AAAAGTTACCACAGGGATAACTGGCTTGTGGCGGCCAAGCGTTCATAGCGACGTCGCTTT 12785102 Query 2502 TTGGCACCTCGATGTCGGCTCATCACATCCTGGGGCTGAAGTAG--GTC-CCAAGGGTAT 2558 ||| | ||||||||||||| || ||| | | ||||| || || ||||| || Sbjct 12785103 TTGATCCTTCGATGTCGGCTCTTCCTATCATTG---TGAAGCAGAATTCACCAAGCGTTG 12785159 Query 2559 GGCTGTTCGCCATTTAAAGTGGTACGCGAGCTGGGTTTAGAACGTCGTGAGACAG 2613 | ||||| || ||| || ||| |||||||||||||| ||||||||||||| Sbjct 12785160 GATTGTTCACCCACTAATAGGGAACGTGAGCTGGGTTTAGACCGTCGTGAGACAG 12785214 Score = 96.9 bits (106), Expect = 5e-17 Identities = 128/175 (73%), Gaps = 6/175 (3%) Strand=Plus/Plus Query 2442 AAAAGGTACTCCGGGGATAACAGGCTGATACCGCCCAAGAGTTCATATCGACGGCGGTGT 2501 ||||| ||| | |||||||| |||| | || ||||| ||||||| ||||| || | | Sbjct 12822845 AAAAGTTACCACAGGGATAACTGGCTTGTGGCGGCCAAGCGTTCATAGCGACGTCGCTTT 12822904 Query 2502 TTGGCACCTCGATGTCGGCTCATCACATCCTGGGGCTGAAGTAG--GTC-CCAAGGGTAT 2558 ||| | ||||||||||||| || ||| | | ||||| || || ||||| || Sbjct 12822905 TTGATCCTTCGATGTCGGCTCTTCCTATCATTG---TGAAGCAGAATTCACCAAGCGTTG 12822961 Query 2559 GGCTGTTCGCCATTTAAAGTGGTACGCGAGCTGGGTTTAGAACGTCGTGAGACAG 2613 | ||||| || ||| || ||| |||||||||||||| ||||||||||||| Sbjct 12822962 GATTGTTCACCCACTAATAGGGAACGTGAGCTGGGTTTAGACCGTCGTGAGACAG 12823016 Score = 96.9 bits (106), Expect = 5e-17 Identities = 128/175 (73%), Gaps = 6/175 (3%) Strand=Plus/Minus Query 2442 AAAAGGTACTCCGGGGATAACAGGCTGATACCGCCCAAGAGTTCATATCGACGGCGGTGT 2501 ||||| ||| | |||||||| |||| | || ||||| ||||||| ||||| || | | Sbjct 12826103 AAAAGTTACCACAGGGATAACTGGCTTGTGGCGGCCAAGCGTTCATAGCGACGTCGCTTT 12826044 Query 2502 TTGGCACCTCGATGTCGGCTCATCACATCCTGGGGCTGAAGTAGG--TC-CCAAGGGTAT 2558 ||| | ||||||||||||| || ||| | | ||||| || || ||||| || Sbjct 12826043 TTGATCCTTCGATGTCGGCTCTTCCTATCATTG---TGAAGCAGAATTCACCAAGCGTTG 12825987 Query 2559 GGCTGTTCGCCATTTAAAGTGGTACGCGAGCTGGGTTTAGAACGTCGTGAGACAG 2613 | ||||| || ||| || ||| |||||||||||||| ||||||||||||| Sbjct 12825986 GATTGTTCACCCACTAATAGGGAACGTGAGCTGGGTTTAGACCGTCGTGAGACAG 12825932 Score = 96.9 bits (106), Expect = 5e-17 Identities = 128/175 (73%), Gaps = 6/175 (3%) Strand=Plus/Plus Query 2442 AAAAGGTACTCCGGGGATAACAGGCTGATACCGCCCAAGAGTTCATATCGACGGCGGTGT 2501 ||||| ||| | |||||||| |||| | || ||||| ||||||| ||||| || | | Sbjct 12880893 AAAAGTTACCACAGGGATAACTGGCTTGTGGCGGCCAAGCGTTCATAGCGACGTCGCTTT 12880952 Query 2502 TTGGCACCTCGATGTCGGCTCATCACATCCTGGGGCTGAAGTAG--GTC-CCAAGGGTAT 2558 ||| | ||||||||||||| || ||| | | ||||| || || ||||| || Sbjct 12880953 TTGATCCTTCGATGTCGGCTCTTCCTATCATTG---TGAAGCAGAATTCACCAAGCGTTG 12881009 Query 2559 GGCTGTTCGCCATTTAAAGTGGTACGCGAGCTGGGTTTAGAACGTCGTGAGACAG 2613 | ||||| || ||| || ||| |||||||||||||| ||||||||||||| Sbjct 12881010 GATTGTTCACCCACTAATAGGGAACGTGAGCTGGGTTTAGACCGTCGTGAGACAG 12881064 Score = 66.2 bits (72), Expect = 8e-08 Identities = 71/93 (76%), Gaps = 1/93 (1%) Strand=Plus/Plus Query 198 GAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGG 257 ||| | || ||| | ||| | |||||||||||| ||| ||||||| ||||| ||| Sbjct 12781087 GAATTTAAGCATATTAGTCAGCGGAGGAAAAGAAACTAACGAGGATTCCCTCAGTAACGG 12781146 Query 258 CGAGCGAACGGGGAGCAGCCCAGAGCCTGAATC 290 |||| |||| |||| ||||||| ||| ||||| Sbjct 12781147 CGAGTGAACAGGGAAGAGCCCAGCGCC-GAATC 12781178 Score = 66.2 bits (72), Expect = 8e-08 Identities = 71/93 (76%), Gaps = 1/93 (1%) Strand=Plus/Plus Query 198 GAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGG 257 ||| | || ||| | ||| | |||||||||||| ||| ||||||| ||||| ||| Sbjct 12818889 GAATTTAAGCATATTAGTCAGCGGAGGAAAAGAAACTAACGAGGATTCCCTCAGTAACGG 12818948 Query 258 CGAGCGAACGGGGAGCAGCCCAGAGCCTGAATC 290 |||| |||| |||| ||||||| ||| ||||| Sbjct 12818949 CGAGTGAACAGGGAAGAGCCCAGCGCC-GAATC 12818980 Score = 66.2 bits (72), Expect = 8e-08 Identities = 71/93 (76%), Gaps = 1/93 (1%) Strand=Plus/Minus Query 198 GAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGG 257 ||| | || ||| | ||| | |||||||||||| ||| ||||||| ||||| ||| Sbjct 12830059 GAATTTAAGCATATTAGTCAGCGGAGGAAAAGAAACTAACGAGGATTCCCTCAGTAACGG 12830000 Query 258 CGAGCGAACGGGGAGCAGCCCAGAGCCTGAATC 290 |||| |||| |||| ||||||| ||| ||||| Sbjct 12829999 CGAGTGAACAGGGAAGAGCCCAGCGCC-GAATC 12829968 Score = 66.2 bits (72), Expect = 8e-08 Identities = 71/93 (76%), Gaps = 1/93 (1%) Strand=Plus/Plus Query 198 GAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGG 257 ||| | || ||| | ||| | |||||||||||| ||| ||||||| ||||| ||| Sbjct 12914729 GAATTTAAGCATATTAGTCAGCGGAGGAAAAGAAACTAACGAGGATTCCCTCAGTAACGG 12914788 Query 258 CGAGCGAACGGGGAGCAGCCCAGAGCCTGAATC 290 |||| |||| |||| ||||||| ||| ||||| Sbjct 12914789 CGAGTGAACAGGGAAGAGCCCAGCGCC-GAATC 12914820 Score = 61.7 bits (67), Expect = 4e-06 Identities = 65/86 (76%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 1898 GAAGCCCCGGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTC 1957 ||||| | |||||||||||| |||||||| || || ||||||||| |||| ||| ||| Sbjct 12784406 GAAGCGCGGGTAAACGGCGGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTC 12784465 Query 1958 GGGTAAGTTCCGACCTGCACGAATGG 1983 ||| | ||| ||| |||||| Sbjct 12784466 ATCTAATTAGTGACGCGCATGAATGG 12784491 Score = 61.7 bits (67), Expect = 4e-06 Identities = 65/86 (76%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 1898 GAAGCCCCGGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTC 1957 ||||| | |||||||||||| |||||||| || || ||||||||| |||| ||| ||| Sbjct 12822208 GAAGCGCGGGTAAACGGCGGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTC 12822267 Query 1958 GGGTAAGTTCCGACCTGCACGAATGG 1983 ||| | ||| ||| |||||| Sbjct 12822268 ATCTAATTAGTGACGCGCATGAATGG 12822293 Score = 61.7 bits (67), Expect = 4e-06 Identities = 65/86 (76%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 1898 GAAGCCCCGGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTC 1957 ||||| | |||||||||||| |||||||| || || ||||||||| |||| ||| ||| Sbjct 12826740 GAAGCGCGGGTAAACGGCGGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTC 12826681 Query 1958 GGGTAAGTTCCGACCTGCACGAATGG 1983 ||| | ||| ||| |||||| Sbjct 12826680 ATCTAATTAGTGACGCGCATGAATGG 12826655 Score = 61.7 bits (67), Expect = 4e-06 Identities = 65/86 (76%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 1898 GAAGCCCCGGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTC 1957 ||||| | |||||||||||| |||||||| || || ||||||||| |||| ||| ||| Sbjct 12880256 GAAGCGCGGGTAAACGGCGGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTC 12880315 Query 1958 GGGTAAGTTCCGACCTGCACGAATGG 1983 ||| | ||| ||| |||||| Sbjct 12880316 ATCTAATTAGTGACGCGCATGAATGG 12880341 Score = 54.5 bits (59), Expect = 5e-04 Identities = 48/59 (81%), Gaps = 1/59 (2%) Strand=Plus/Plus Query 2233 GGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGT-CTCCTCCTAAAGAGTAACGGAGG 2290 |||||||| | |||||| ||||||||||||||||| | ||| ||| |||||| ||| Sbjct 12784833 GGACAGTGCCAGGTGGGGAGTTTGACTGGGGCGGTACACCTGTCAAACGGTAACGCAGG 12784891 Score = 54.5 bits (59), Expect = 5e-04 Identities = 48/59 (81%), Gaps = 1/59 (2%) Strand=Plus/Plus Query 2233 GGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGT-CTCCTCCTAAAGAGTAACGGAGG 2290 |||||||| | |||||| ||||||||||||||||| | ||| ||| |||||| ||| Sbjct 12822635 GGACAGTGCCAGGTGGGGAGTTTGACTGGGGCGGTACACCTGTCAAACGGTAACGCAGG 12822693 Score = 54.5 bits (59), Expect = 5e-04 Identities = 54/69 (78%), Gaps = 1/69 (1%) Strand=Plus/Minus Query 2233 GGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGT-CTCCTCCTAAAGAGTAACGGAGGA 2291 |||||||| | |||||| ||||||||||||||||| | ||| ||| |||||| ||| Sbjct 12826313 GGACAGTGCCAGGTGGGGAGTTTGACTGGGGCGGTACACCTGTCAAACGGTAACGCAGGT 12826254 Query 2292 GCACGAAGG 2300 | | |||| Sbjct 12826253 GTCCTAAGG 12826245 Score = 54.5 bits (59), Expect = 5e-04 Identities = 48/59 (81%), Gaps = 1/59 (2%) Strand=Plus/Plus Query 2233 GGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGT-CTCCTCCTAAAGAGTAACGGAGG 2290 |||||||| | |||||| ||||||||||||||||| | ||| ||| |||||| ||| Sbjct 12880683 GGACAGTGCCAGGTGGGGAGTTTGACTGGGGCGGTACACCTGTCAAACGGTAACGCAGG 12880741 Score = 45.5 bits (49), Expect = 0.27 Identities = 31/34 (91%), Gaps = 1/34 (3%) Strand=Plus/Plus Query 1068 GTTGGCTTAGAAGCAGCCATCATTTAAAGAAAGC 1101 ||||||||| |||||||||||| || |||||||| Sbjct 24816972 GTTGGCTTAAAAGCAGCCATCAATT-AAGAAAGC 24817004 >NC_028320.1 Leopardus geoffroyi isolate OGE mitochondrion, complete genome Length=16738 Score = 48.2 bits (52), Expect = 0.022 Identities = 54/70 (77%), Gaps = 2/70 (3%) Strand=Plus/Plus Query 752 ATGTTGAAAAATTAGCG-GATGACTTGTGGCTGGGGGTGAAAGGCCAATCAAACCGGGAG 810 |||||| ||||| || | || || |||||| | | ||||||| ||| | | | || || | Sbjct 2158 ATGTTGCAAAAT-AGTGAGAAGATTTGTGGGTAGAGGTGAAAAGCCTAACGAGCCTGGTG 2216 Query 811 ATAGCTGGTT 820 |||||||||| Sbjct 2217 ATAGCTGGTT 2226 Score = 47.3 bits (51), Expect = 0.077 Identities = 38/45 (84%), Gaps = 1/45 (2%) Strand=Plus/Plus Query 1068 GTTGGCTTAGAAGCAGCCATCATTTAAAGAAAGCGTAATAGCTCA 1112 |||||| || |||||||||||| || |||||||||| |||||| Sbjct 2376 GTTGGCCTAAAAGCAGCCATCAATT-AAGAAAGCGTTCAAGCTCA 2419 >NC_059343.1 Leopardus geoffroyi isolate Oge1 chromosome X, O.geoffroyi_Oge1_pat1.0, whole genome shotgun sequence Length=128930408 Score = 47.3 bits (51), Expect = 0.077 Identities = 38/45 (84%), Gaps = 1/45 (2%) Strand=Plus/Minus Query 1068 GTTGGCTTAGAAGCAGCCATCATTTAAAGAAAGCGTAATAGCTCA 1112 |||||| || |||||||||||| || |||||||||| |||||| Sbjct 61680527 GTTGGCCTAAAAGCAGCCATCAATT-AAGAAAGCGTTCAAGCTCA 61680484 >NC_059327.1 Leopardus geoffroyi isolate Oge1 chromosome B1, O.geoffroyi_Oge1_pat1.0, whole genome shotgun sequence Length=205836458 Score = 47.3 bits (51), Expect = 0.077 Identities = 38/45 (84%), Gaps = 1/45 (2%) Strand=Plus/Plus Query 1068 GTTGGCTTAGAAGCAGCCATCATTTAAAGAAAGCGTAATAGCTCA 1112 ||||||||| |||||||||||| || ||||||| || |||||| Sbjct 96941488 GTTGGCTTAAAAGCAGCCATCAATT-AAGAAAGTGTTCAAGCTCA 96941531 >NC_059326.1 Leopardus geoffroyi isolate Oge1 chromosome A1, O.geoffroyi_Oge1_pat1.0, whole genome shotgun sequence Length=239694388 Score = 47.3 bits (51), Expect = 0.077 Identities = 38/45 (84%), Gaps = 1/45 (2%) Strand=Plus/Plus Query 1068 GTTGGCTTAGAAGCAGCCATCATTTAAAGAAAGCGTAATAGCTCA 1112 ||||||||| |||||||||||| || |||||||| | |||||| Sbjct 928412 GTTGGCTTAAAAGCAGCCATCAGTT-AAGAAAGCATTCAAGCTCA 928455 >NC_059334.1 Leopardus geoffroyi isolate Oge1 chromosome D2, O.geoffroyi_Oge1_pat1.0, whole genome shotgun sequence Length=88472993 Score = 46.4 bits (50), Expect = 0.077 Identities = 25/25 (100%), Gaps = 0/25 (0%) Strand=Plus/Plus Query 268 GGGAGCAGCCCAGAGCCTGAATCAG 292 ||||||||||||||||||||||||| Sbjct 82714516 GGGAGCAGCCCAGAGCCTGAATCAG 82714540 >NC_059342.1 Leopardus geoffroyi isolate Oge1 chromosome D4, O.geoffroyi_Oge1_pat1.0, whole genome shotgun sequence Length=94461142 Score = 45.5 bits (49), Expect = 0.27 Identities = 80/117 (68%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 2479 AGAGTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCACATCCTGGGGCT 2538 ||||||||||| ||| | |||| |||||||||| | ||| |||| | | | | Sbjct 31883594 AGAGTTCATATTGACAATAGAGTTTACAACCTCGATGTTAGATCAGGACATTCCGATGGT 31883653 Query 2539 GAAGTAGGTCCCAAGGGTATGGCTGTTCGCCATTTAAAGTGGTACGCGAGCTGGGTT 2595 | || || | ||| ||| | ||||| || ||||||| |||| || ||| ||| Sbjct 31883654 GCAGCAGCTATCAAAGGTTCGTTTGTTCAACAATTAAAGTCCTACGTGATCTGAGTT 31883710 >NC_059338.1 Leopardus geoffroyi isolate Oge1 chromosome C3, O.geoffroyi_Oge1_pat1.0, whole genome shotgun sequence Length=153706148 Score = 43.7 bits (47), Expect = 0.94 Identities = 53/70 (76%), Gaps = 2/70 (3%) Strand=Plus/Plus Query 752 ATGTTGAAAAATTAGCG-GATGACTTGTGGCTGGGGGTGAAAGGCCAATCAAACCGGGAG 810 |||||| ||||| || | || || || ||| | | ||||||| ||| | | | || || | Sbjct 119047377 ATGTTGCAAAAT-AGTGAGAAGATTTATGGGTAGAGGTGAAAAGCCTAACGAGCCTGGTG 119047435 Query 811 ATAGCTGGTT 820 |||||||||| Sbjct 119047436 ATAGCTGGTT 119047445 Score = 41.0 bits (44), Expect = 3.3 Identities = 25/27 (93%), Gaps = 0/27 (0%) Strand=Plus/Plus Query 2031 CTCGCTGTGAAGATGCAGTGTACCCGC 2057 ||||||||||| ||||||||| ||||| Sbjct 79186356 CTCGCTGTGAAAATGCAGTGTCCCCGC 79186382 >NC_059332.1 Leopardus geoffroyi isolate Oge1 chromosome B2, O.geoffroyi_Oge1_pat1.0, whole genome shotgun sequence Length=152606360 Score = 42.8 bits (46), Expect = 0.94 Identities = 23/23 (100%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 1585 CTAAGCATCAGGTAACATCAAAT 1607 ||||||||||||||||||||||| Sbjct 151130792 CTAAGCATCAGGTAACATCAAAT 151130770 Score = 41.0 bits (44), Expect = 3.3 Identities = 25/27 (93%), Gaps = 0/27 (0%) Strand=Plus/Minus Query 284 CTGAATCAGTGTGTGTGTTAGTGGAAG 310 |||||||||||||| |||||| ||||| Sbjct 47512164 CTGAATCAGTGTGTTTGTTAGGGGAAG 47512138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7031666500488 Database: GCF_018350155.1_O.geoffroyi_Oge1_pat1.0_genomic.fna Posted date: Nov 1, 2022 8:31 PM Number of letters in database: 2,426,387,554 Number of sequences in database: 47 Matrix: blastn matrix 2 -3 Gap Penalties: Existence: 5, Extension: 2