2cv0_pairs.txt **************************************************************************** RMSD of the bases (----- for WC bp, + for isolated bp, x for helix change) Strand I Strand II Helix 1 (0.011) C:.501_:[..G]G-----C[..C]:.572_:C (0.008) | 2 (0.008) C:.502_:[..G]G-*---U[..U]:.571_:C (0.007) | 3 (0.005) C:.503_:[..C]C-----G[..G]:.570_:C (0.004) | 4 (0.005) C:.504_:[..C]C-----G[..G]:.569_:C (0.008) | 5 (0.007) C:.505_:[..C]C-----G[..G]:.568_:C (0.009) | 6 (0.006) C:.506_:[..C]C-----G[..G]:.567_:C (0.004) | 7 (0.004) C:.507_:[..A]Ax----U[..U]:.566_:C (0.004) | 8 (0.008) C:.549_:[..G]G-----C[..C]:.565_:C (0.003) | 9 (0.006) C:.550_:[..G]G-----C[..C]:.564_:C (0.005) | 10 (0.005) C:.551_:[..G]G-----C[..C]:.563_:C (0.002) | 11 (0.003) C:.552_:[..G]G-----C[..C]:.562_:C (0.004) | 12 (0.008) C:.553_:[..G]G----xC[..C]:.561_:C (0.004) | 13 (0.007) C:.554_:[..U]U-**-xA[..A]:.558_:C (0.003) | 14 (0.009) C:.555_:[..U]Ux**+xG[..G]:.518_:C (0.014) x 15 (0.006) C:.538_:[..A]A-*---C[..C]:.532_:C (0.006) | 16 (0.007) C:.539_:[..G]G-----C[..C]:.531_:C (0.003) | 17 (0.009) C:.540_:[..G]G-----C[..C]:.530_:C (0.007) | 18 (0.003) C:.541_:[..C]C-----G[..G]:.529_:C (0.006) | 19 (0.008) C:.542_:[..C]C-----G[..G]:.528_:C (0.007) | 20 (0.007) C:.543_:[..G]G-----C[..C]:.527_:C (0.009) | 21 (0.011) C:.544_:[..A]Ax*---G[..G]:.526_:C (0.009) | 22 (0.012) C:.510_:[..G]G-----C[..C]:.525_:C (0.005) | 23 (0.005) C:.511_:[..U]U-----A[..A]:.524_:C (0.006) | 24 (0.005) C:.512_:[..C]C-----G[..G]:.523_:C (0.010) | 25 (0.007) C:.513_:[..U]U-*--xG[..G]:.522_:C (0.013) | 26 (0.009) C:.514_:[..A]A-**-xU[..U]:.508_:C (0.005) | 27 (0.024) C:.515_:[..G]Gx**+xC[..C]:.548_:C (0.013) x 28 (0.012) C:.519_:[..G]G-----C[..C]:.556_:C (0.003) + Note: This structure contains 8[4] non-Watson-Crick base-pairs. ****************************************************************************