FastQCFastQC Report
Ρα 6 δεκ 2014
out2.fastq

Summary

[OK]Basic Statistics

MeasureValue
Filenameout2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3892273
Sequences flagged as poor quality0
Sequence length50-101
%GC35

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCGGGG2851.7782178E-514.8170938
GGCCCGG3055.219073E-412.3070936
GCCGGGG2800.003817771311.74362854
TGGCCCG4004.1847E-410.5684495
GCCCGGG3650.00234365910.2840097
CCGGGGG4206.6240894E-410.0544569
GCGGCCG2706.724632E-48.68981736-37
GGGGGAT9551.3197496E-78.3612021
ATGGCCC5900.00159959757.96178154
GGGGATC10254.097601E-77.7901932
GTATGGC7300.00162770847.0777132
CGTCTGG4500.0021146196.25920244-45
AGCCTGG5400.00162972015.873135686-87
GGGATCC15853.4138502E-45.0381463
Produced by FastQC (version 0.11.2)