FastQCFastQC Report
Сб 6 дек 2014
Ath_tae_CTTGTA_L003_R2_006.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameAth_tae_CTTGTA_L003_R2_006.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4000000
Sequences flagged as poor quality0
Sequence length101
%GC35

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGGCGCC2051.0715667E-815.06045342-43
CGCCGTA6450.013.99088646-47
TGGTCGC7050.012.46410542-43
GTCGCCG8450.012.08537944-45
GAGCGTC8450.011.80491359
GGCCCGG3500.001492100410.8573096
AGCGTCG8750.010.8562910-11
CCGTATC10300.010.61067548-49
GGCGCCC2054.7420527E-410.42646844-45
GCGCCGC2000.00452020079.4996744-45
CGCCCGA2000.00452253369.49907646-47
TGGCCCG4050.00495533049.3941425
CGTCGTG10450.09.31564312-13
GCGGCCG3459.071733E-68.94823636-37
GGGGCGC3203.647058E-58.90594142-43
GCCCGGG4350.0089993018.7357657
CGCGGCC3305.2387546E-58.63536236-37
AGAGCGT12754.0017767E-118.5687588
CGGCCGC3052.113057E-48.56511538-39
ATGGCCC6807.30684E-58.39298254
Produced by FastQC (version 0.11.2)