RID: 181HWCVS016 Job Title:SPIKE_BCHK4 Program: BLASTP Database: swissprot Non-redundant UniProtKB/SwissProt sequences Query #1: SPIKE_BCHK4 Query ID: lcl|Query_1338590 Length: 486 Sequences producing significant alignments: Scientific Common Max Total Query E Per. Acc. Description Name Name Taxid Score Score cover Value Ident Len Accession RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltNam... Tylonycteris... NA 694007 992 992 100% 0.0 100.00 1352 A3EX94.1 RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltNam... Bat coronavi... NA 389230 976 976 100% 0.0 98.56 1350 Q0Q4F2.1 RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltNam... Pipistrellus... NA 694008 824 824 99% 0.0 80.71 1352 A3EXD0.1 RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltNam... Betacoronavi... NA 1263720 737 737 99% 0.0 74.43 1353 K9N5Q8.1 RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltNam... Rousettus ba... NA 694006 378 378 96% 4e-118 42.05 1274 A3EXG6.1 RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltNam... Bat SARS cor... NA 442736 377 377 91% 5e-118 46.53 1242 Q3LZX1.1 RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltNam... Bat SARS CoV... NA 349344 377 377 91% 1e-117 46.41 1241 Q3I5J5.1 RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltNam... Bat CoV 279/... NA 389167 375 375 91% 2e-117 46.41 1241 Q0Q475.1 RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltNam... Severe acute... NA 694009 374 374 92% 8e-117 46.22 1255 P59594.1 RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltNam... Severe acute... NA 2697049 374 374 94% 2e-116 45.65 1273 P0DTC2.1 RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltNam... Porcine hema... NA 230236 360 360 94% 8e-111 44.83 1349 Q8JSP8.1 RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltNam... Human corona... NA 31631 358 358 91% 2e-110 44.84 1353 P36334.1 RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltNam... Porcine hema... NA 230237 358 358 94% 2e-110 44.83 1349 Q8BB25.1 RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltNam... Bovine coron... NA 233261 357 357 94% 5e-110 44.47 1363 Q9QAR5.1 RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltNam... Bovine coron... NA 231432 357 357 94% 6e-110 44.47 1363 Q9QAQ8.1 RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltNam... Bovine enter... NA 233262 356 356 94% 2e-109 44.26 1363 Q91A26.1 RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltNam... Bovine respi... NA 233264 355 355 94% 5e-109 44.26 1363 Q8V436.1 RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltNam... Bovine coron... NA 11134 354 354 94% 8e-109 44.73 1363 P25194.1 RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltNam... Bovine coron... NA 11130 353 353 94% 2e-108 44.52 1363 P25191.1 RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltNam... Bovine coron... NA 11131 353 353 94% 2e-108 44.04 1363 P25192.1 RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltNam... Rat coronavi... NA 33740 350 350 97% 2e-107 44.22 1360 Q9IKD1.1 RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltNam... Murine hepat... NA 11142 350 350 94% 3e-107 44.42 1324 P11224.2 RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltNam... Bovine coron... NA 11133 350 350 94% 3e-107 44.73 1363 P25193.2 RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltNam... Bovine coron... NA 11132 350 350 94% 4e-107 44.52 1363 P15777.1 RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltNam... Bovine coron... NA 11129 349 349 94% 5e-107 43.83 1363 P25190.1 RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltNam... Human corona... NA 443241 347 347 91% 4e-106 43.91 1351 Q0ZME7.1 RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltNam... Human corona... NA 443240 347 347 91% 4e-106 43.91 1351 Q14EB0.1 RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltNam... Human corona... NA 443239 340 340 90% 9e-104 42.57 1356 Q5MQD0.1 RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltNam... Murine hepat... NA 11144 333 333 94% 9e-102 43.58 1235 P11225.1 RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltNam... Murine hepat... NA 33735 333 333 94% 6e-101 43.58 1376 Q02385.1 RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltNam... Murine hepat... NA 12760 333 333 94% 6e-101 43.58 1376 P22432.1 RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltNam... Canine coron... NA 441619 303 303 89% 3e-90 42.61 1453 Q7T6T3.1 RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltNam... Canine enter... NA 36391 299 299 89% 1e-88 41.67 1451 P36300.1 RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltNam... Porcine resp... NA 11148 297 297 95% 2e-88 40.04 1225 P24413.1 RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltNam... Avian infect... NA 11124 295 295 89% 3e-88 38.81 1154 P12722.1 RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltNam... Canine enter... NA 33732 297 297 88% 5e-88 41.87 1453 Q65984.1 RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltNam... Feline infec... NA 33734 297 297 89% 6e-88 41.58 1452 P10033.1 RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltNam... Porcine resp... NA 33736 295 295 95% 6e-88 40.08 1225 P27655.1 RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltNam... Porcine tran... NA 11151 297 297 95% 7e-88 40.08 1447 P07946.2 RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltNam... Avian infect... NA 11121 294 294 89% 1e-87 38.81 1163 P05135.1 RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltNam... Porcine tran... NA 33737 294 294 89% 6e-87 41.03 1449 P33470.2 RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltNam... Porcine tran... NA 33738 294 294 95% 7e-87 39.16 1447 Q01977.1 RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltNam... Porcine tran... NA 11150 293 293 89% 2e-86 41.15 1449 P18450.2 RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltNam... Avian infect... NA 11126 288 288 89% 1e-85 38.04 1162 P12650.1 RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltNam... Avian infect... NA 11122 284 284 89% 5e-84 38.13 1162 P11223.1 RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltNam... Avian infect... NA 11127 283 283 89% 1e-83 38.13 1162 P12651.1 RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltNam... Porcine epid... NA 229032 274 274 93% 6e-80 37.87 1383 Q91AV1.1 RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltNam... Human corona... NA 277944 273 273 80% 1e-79 42.24 1356 Q6Q1S2.1 RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltNam... Human corona... NA 11137 272 272 77% 1e-79 42.24 1173 P15423.1 RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltNam... Scotophilus ... NA 693999 264 264 77% 2e-76 41.73 1371 Q0Q466.1 Alignments: >RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltName: Full=E2; AltName: Full=Peplomer protein; Contains: RecName: Full=Spike protein S1; Contains: RecName: Full=Spike protein S2; Contains: RecName: Full=Spike protein S2'; Flags: Precursor [Tylonycteris bat coronavirus HKU4] Sequence ID: A3EX94.1 Length: 1352 Range 1: 750 to 1235 Score:992 bits(2564), Expect:0.0, Method:Compositional matrix adjust., Identities:486/486(100%), Positives:486/486(100%), Gaps:0/486(0%) Query 1 SYSASQFQLAVLNYTSPIVVTPINSSGFTAAIPTNFSFSVTQEYIETSIQKVTVDCKQYV 60 SYSASQFQLAVLNYTSPIVVTPINSSGFTAAIPTNFSFSVTQEYIETSIQKVTVDCKQYV Sbjct 750 SYSASQFQLAVLNYTSPIVVTPINSSGFTAAIPTNFSFSVTQEYIETSIQKVTVDCKQYV 809 Query 61 CNGFTRCEKLLVEYGQFCSKINQALHGANLRQDESVYSLYSNIKTTSTQTLEYGLNGDFN 120 CNGFTRCEKLLVEYGQFCSKINQALHGANLRQDESVYSLYSNIKTTSTQTLEYGLNGDFN Sbjct 810 CNGFTRCEKLLVEYGQFCSKINQALHGANLRQDESVYSLYSNIKTTSTQTLEYGLNGDFN 869 Query 121 LTLLQVPQIGGSSSSYRSAIEDLLFDKVTIADPGYMQGYDDCMKQGPQSARDLICAQYVS 180 LTLLQVPQIGGSSSSYRSAIEDLLFDKVTIADPGYMQGYDDCMKQGPQSARDLICAQYVS Sbjct 870 LTLLQVPQIGGSSSSYRSAIEDLLFDKVTIADPGYMQGYDDCMKQGPQSARDLICAQYVS 929 Query 181 GYKVLPPLYDPNMEAAYTSSLLGSIAGAGWTAGLSSFAAIPFAQSMFYRLNGVGITQQVL 240 GYKVLPPLYDPNMEAAYTSSLLGSIAGAGWTAGLSSFAAIPFAQSMFYRLNGVGITQQVL Sbjct 930 GYKVLPPLYDPNMEAAYTSSLLGSIAGAGWTAGLSSFAAIPFAQSMFYRLNGVGITQQVL 989 Query 241 SENQKLIANKFNQALGAMQTGFTTSNLAFSKVQDAVNANAQALSKLASELSNTFGAISSS 300 SENQKLIANKFNQALGAMQTGFTTSNLAFSKVQDAVNANAQALSKLASELSNTFGAISSS Sbjct 990 SENQKLIANKFNQALGAMQTGFTTSNLAFSKVQDAVNANAQALSKLASELSNTFGAISSS 1049 Query 301 ISDILARLDTVEQDAQIDRLINGRLISLNAFVSQQLVRSETAARSAQLASDKVNECVKSQ 360 ISDILARLDTVEQDAQIDRLINGRLISLNAFVSQQLVRSETAARSAQLASDKVNECVKSQ Sbjct 1050 ISDILARLDTVEQDAQIDRLINGRLISLNAFVSQQLVRSETAARSAQLASDKVNECVKSQ 1109 Query 361 SKRNGFCGSGTHIVSFVVNAPNGFYFFHVGYVPTNYTNVTAAYGLCNNNNPPLCIAPIDG 420 SKRNGFCGSGTHIVSFVVNAPNGFYFFHVGYVPTNYTNVTAAYGLCNNNNPPLCIAPIDG Sbjct 1110 SKRNGFCGSGTHIVSFVVNAPNGFYFFHVGYVPTNYTNVTAAYGLCNNNNPPLCIAPIDG 1169 Query 421 YFITNQTTTYSVDTEWYYTGSSFYKPEPITQANSRYVSSDVKFDKLENNLPPPLLENSTD 480 YFITNQTTTYSVDTEWYYTGSSFYKPEPITQANSRYVSSDVKFDKLENNLPPPLLENSTD Sbjct 1170 YFITNQTTTYSVDTEWYYTGSSFYKPEPITQANSRYVSSDVKFDKLENNLPPPLLENSTD 1229 Query 481 VDFKDE 486 VDFKDE Sbjct 1230 VDFKDE 1235 >RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltName: Full=E2; AltName: Full=Peplomer protein; Contains: RecName: Full=Spike protein S1; Contains: RecName: Full=Spike protein S2; Contains: RecName: Full=Spike protein S2'; Flags: Precursor [Bat coronavirus (BtCoV/133/2005)] Sequence ID: Q0Q4F2.1 Length: 1350 Range 1: 750 to 1233 Score:976 bits(2522), Expect:0.0, Method:Compositional matrix adjust., Identities:479/486(99%), Positives:483/486(99%), Gaps:2/486(0%) Query 1 SYSASQFQLAVLNYTSPIVVTPINSSGFTAAIPTNFSFSVTQEYIETSIQKVTVDCKQYV 60 SYSASQFQLAVLNYTSPIVVTPINSSGFTAAIPTNFSFS+TQEYIETSIQKVTVDCKQYV Sbjct 750 SYSASQFQLAVLNYTSPIVVTPINSSGFTAAIPTNFSFSLTQEYIETSIQKVTVDCKQYV 809 Query 61 CNGFTRCEKLLVEYGQFCSKINQALHGANLRQDESVYSLYSNIKTTSTQTLEYGLNGDFN 120 CNGFTRCEKLLVEYGQFCSKINQALHGANLRQDESVYSLYSNIKTTSTQTLEYGLNGDFN Sbjct 810 CNGFTRCEKLLVEYGQFCSKINQALHGANLRQDESVYSLYSNIKTTSTQTLEYGLNGDFN 869 Query 121 LTLLQVPQIGGSSSSYRSAIEDLLFDKVTIADPGYMQGYDDCMKQGPQSARDLICAQYVS 180 LTLLQVPQIGGSS YRSAIEDLLFDKVTIADPGYMQGYDDCMKQGPQSARDLICAQYVS Sbjct 870 LTLLQVPQIGGSS--YRSAIEDLLFDKVTIADPGYMQGYDDCMKQGPQSARDLICAQYVS 927 Query 181 GYKVLPPLYDPNMEAAYTSSLLGSIAGAGWTAGLSSFAAIPFAQSMFYRLNGVGITQQVL 240 GYKVLPPLYDPNMEAAYTSSLLGSIAGAGWTAGLSSFAAIPFAQSMFYRLNGVGITQQVL Sbjct 928 GYKVLPPLYDPNMEAAYTSSLLGSIAGAGWTAGLSSFAAIPFAQSMFYRLNGVGITQQVL 987 Query 241 SENQKLIANKFNQALGAMQTGFTTSNLAFSKVQDAVNANAQALSKLASELSNTFGAISSS 300 SENQKLIANKFNQALGAMQTGFTTSNLAFSKVQDAVNANAQALSKLASELSNTFGAISSS Sbjct 988 SENQKLIANKFNQALGAMQTGFTTSNLAFSKVQDAVNANAQALSKLASELSNTFGAISSS 1047 Query 301 ISDILARLDTVEQDAQIDRLINGRLISLNAFVSQQLVRSETAARSAQLASDKVNECVKSQ 360 ISDILARLDTVEQDAQIDRLINGRL SLNAFVSQQLVRSETAARSAQLASDKVNECVKSQ Sbjct 1048 ISDILARLDTVEQDAQIDRLINGRLTSLNAFVSQQLVRSETAARSAQLASDKVNECVKSQ 1107 Query 361 SKRNGFCGSGTHIVSFVVNAPNGFYFFHVGYVPTNYTNVTAAYGLCNNNNPPLCIAPIDG 420 SKRNGFCGSGTHIVSFVVNAPNGFYFFHVGYVPTNYTNVTAAYGLCN+NNPPLCIAPIDG Sbjct 1108 SKRNGFCGSGTHIVSFVVNAPNGFYFFHVGYVPTNYTNVTAAYGLCNHNNPPLCIAPIDG 1167 Query 421 YFITNQTTTYSVDTEWYYTGSSFYKPEPITQANSRYVSSDVKFDKLENNLPPPLLENSTD 480 YFITNQTTTYSVDTEWYYTGSSF+KPEPITQANSRYVSSDVKF+KLENNLPPPLLENSTD Sbjct 1168 YFITNQTTTYSVDTEWYYTGSSFFKPEPITQANSRYVSSDVKFEKLENNLPPPLLENSTD 1227 Query 481 VDFKDE 486 VDFKDE Sbjct 1228 VDFKDE 1233 >RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltName: Full=E2; AltName: Full=Peplomer protein; Contains: RecName: Full=Spike protein S1; Contains: RecName: Full=Spike protein S2; Contains: RecName: Full=Spike protein S2'; Flags: Precursor [Pipistrellus bat coronavirus HKU5] Sequence ID: A3EXD0.1 Length: 1352 Range 1: 754 to 1235 Score:824 bits(2128), Expect:0.0, Method:Compositional matrix adjust., Identities:389/482(81%), Positives:435/482(90%), Gaps:2/482(0%) Query 7 FQLAVLNYTSPIVVTPINSSGFTAAIPTNFSFSVTQEYIETSIQKVTVDCKQYVCNGFTR 66 FQ+A LN+TSP+ + PINS+GF A+PTNF+F VTQE+IET+IQK+TVDCKQYVCNGF + Sbjct 754 FQIATLNFTSPLTLAPINSTGFVVAVPTNFTFGVTQEFIETTIQKITVDCKQYVCNGFKK 813 Query 67 CEKLLVEYGQFCSKINQALHGANLRQDESVYSLYSNIKTTSTQTLEYGLNGDFNLTLLQV 126 CE LL EYGQFCSKINQALHGANLRQDES+ +L+S+IKT +TQ L+ GLNGDFNLT+LQ+ Sbjct 814 CEDLLKEYGQFCSKINQALHGANLRQDESIANLFSSIKTQNTQPLQAGLNGDFNLTMLQI 873 Query 127 PQIGGSSSSYRSAIEDLLFDKVTIADPGYMQGYDDCMKQGPQSARDLICAQYVSGYKVLP 186 PQ+ YRS IEDLLF+KVTIADPGYMQGYD+CM+QGPQSARDLICAQYV+GYKVLP Sbjct 874 PQVTTGERKYRSTIEDLLFNKVTIADPGYMQGYDECMQQGPQSARDLICAQYVAGYKVLP 933 Query 187 PLYDPNMEAAYTSSLLGSIAGAGWTAGLSSFAAIPFAQSMFYRLNGVGITQQVLSENQKL 246 PLYDP MEAAYTSSLLGSIAGA WTAGLSSFAAIPFAQS+FYRLNGVGITQQVLSENQK+ Sbjct 934 PLYDPYMEAAYTSSLLGSIAGASWTAGLSSFAAIPFAQSIFYRLNGVGITQQVLSENQKI 993 Query 247 IANKFNQALGAMQTGFTTSNLAFSKVQDAVNANAQALSKLASELSNTFGAISSSISDILA 306 IANKFNQALGAMQTGFTT+NLAF+KVQDAVNANA ALSKLA+ELSNTFGAISSSISDILA Sbjct 994 IANKFNQALGAMQTGFTTTNLAFNKVQDAVNANAMALSKLAAELSNTFGAISSSISDILA 1053 Query 307 RLDTVEQDAQIDRLINGRLISLNAFVSQQLVRSETAARSAQLASDKVNECVKSQSKRNGF 366 RLDTVEQ+AQIDRLINGRL SLNAFV+QQLVR+E AARSAQLA DKVNECVKSQSKRNGF Sbjct 1054 RLDTVEQEAQIDRLINGRLTSLNAFVAQQLVRTEAAARSAQLAQDKVNECVKSQSKRNGF 1113 Query 367 CGSGTHIVSFVVNAPNGFYFFHVGYVPTNYTNVTAAYGLCNNNNPPLCIAPIDGYFITNQ 426 CG+GTHIVSF +NAPNG YFFHVGY PT++ N TAAYGLCN NP CIAPIDGYF+ NQ Sbjct 1114 CGTGTHIVSFAINAPNGLYFFHVGYQPTSHVNATAAYGLCNTENPQKCIAPIDGYFVLNQ 1173 Query 427 TTTYSVDT--EWYYTGSSFYKPEPITQANSRYVSSDVKFDKLENNLPPPLLENSTDVDFK 484 TT+ D+ +WYYTGSSF+ PEPIT+ANS+YVS DVKF+ L N LPPPLL NSTD+DFK Sbjct 1174 TTSTVADSDQQWYYTGSSFFHPEPITEANSKYVSMDVKFENLTNRLPPPLLSNSTDLDFK 1233 Query 485 DE 486 +E Sbjct 1234 EE 1235 >RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltName: Full=E2; AltName: Full=Peplomer protein; Contains: RecName: Full=Spike protein S1; Contains: RecName: Full=Spike protein S2; Contains: RecName: Full=Spike protein S2'; Flags: Precursor [Betacoronavirus England 1] Sequence ID: K9N5Q8.1 Length: 1353 Range 1: 756 to 1234 Score:737 bits(1902), Expect:0.0, Method:Compositional matrix adjust., Identities:358/481(74%), Positives:405/481(84%), Gaps:2/481(0%) Query 6 QFQLAVLNYTSPIVVTPINSSGFTAAIPTNFSFSVTQEYIETSIQKVTVDCKQYVCNGFT 65 + +LA + + PI V +NSS F +IPTNFSF VTQEYI+T+IQKVTVDCKQYVCNGF Sbjct 756 EMRLASIAFNHPIQVDQLNSSYFKLSIPTNFSFGVTQEYIQTTIQKVTVDCKQYVCNGFQ 815 Query 66 RCEKLLVEYGQFCSKINQALHGANLRQDESVYSLYSNIKTTSTQTLEYGLNGDFNLTLLQ 125 +CE+LL EYGQFCSKINQALHGANLRQD+SV +L++++K++ + + G GDFNLTLL+ Sbjct 816 KCEQLLREYGQFCSKINQALHGANLRQDDSVRNLFASVKSSQSSPIIPGFGGDFNLTLLE 875 Query 126 VPQIGGSSSSYRSAIEDLLFDKVTIADPGYMQGYDDCMKQGPQSARDLICAQYVSGYKVL 185 I S S RSAIEDLLFDKVTIADPGYMQGYDDCM+QGP SARDLICAQYV+GYKVL Sbjct 876 PVSISTGSRSARSAIEDLLFDKVTIADPGYMQGYDDCMQQGPASARDLICAQYVAGYKVL 935 Query 186 PPLYDPNMEAAYTSSLLGSIAGAGWTAGLSSFAAIPFAQSMFYRLNGVGITQQVLSENQK 245 PPL D NMEAAYTSSLLGSIAG GWTAGLSSFAAIPFAQS+FYRLNGVGITQQVLSENQK Sbjct 936 PPLMDVNMEAAYTSSLLGSIAGVGWTAGLSSFAAIPFAQSIFYRLNGVGITQQVLSENQK 995 Query 246 LIANKFNQALGAMQTGFTTSNLAFSKVQDAVNANAQALSKLASELSNTFGAISSSISDIL 305 LIANKFNQALGAMQTGFTT+N AF KVQDAVN NAQALSKLASELSNTFGAIS+SI DI+ Sbjct 996 LIANKFNQALGAMQTGFTTTNEAFHKVQDAVNNNAQALSKLASELSNTFGAISASIGDII 1055 Query 306 ARLDTVEQDAQIDRLINGRLISLNAFVSQQLVRSETAARSAQLASDKVNECVKSQSKRNG 365 RLD +EQDAQIDRLINGRL +LNAFV+QQLVRSE+AA SAQLA DKVNECVK+QSKR+G Sbjct 1056 QRLDVLEQDAQIDRLINGRLTTLNAFVAQQLVRSESAALSAQLAKDKVNECVKAQSKRSG 1115 Query 366 FCGSGTHIVSFVVNAPNGFYFFHVGYVPTNYTNVTAAYGLCNNNNPPLCIAPIDGYFITN 425 FCG GTHIVSFVVNAPNG YF HVGY P+N+ V +AYGLC+ NP CIAP++GYFI Sbjct 1116 FCGQGTHIVSFVVNAPNGLYFMHVGYYPSNHIEVVSAYGLCDAANPTNCIAPVNGYFIKT 1175 Query 426 QTTTYSVDTEWYYTGSSFYKPEPITQANSRYVSSDVKFDKLENNLPPPLLENSTDVDFKD 485 T + EW YTGSSFY PEPIT N++YV+ V + + NLPPPLL NST +DF+D Sbjct 1176 NNT--RIVDEWSYTGSSFYAPEPITSLNTKYVAPQVTYQNISTNLPPPLLGNSTGIDFQD 1233 Query 486 E 486 E Sbjct 1234 E 1234 >RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltName: Full=E2; AltName: Full=Peplomer protein; Contains: RecName: Full=Spike protein S1; Contains: RecName: Full=Spike protein S2; Contains: RecName: Full=Spike protein S2'; Flags: Precursor [Rousettus bat coronavirus HKU9] Sequence ID: A3EXG6.1 Length: 1274 Range 1: 694 to 1150 Score:378 bits(971), Expect:4e-118, Method:Compositional matrix adjust., Identities:201/478(42%), Positives:294/478(61%), Gaps:32/478(6%) Query 20 VTPINSSGFTAAIPTNFSFSVTQEYIETSIQKVTVDCKQYVCNGFTRCEKLLVEYGQFCS 79 +TP+ + +PTNF+ S T+EYI+T+ K+T+DC +Y+C +RC +L+ YG FC+ Sbjct 694 MTPV----YWVKVPTNFTLSATEEYIQTTAPKITIDCARYLCGDSSRCLNVLLHYGTFCN 749 Query 80 KINQALHGANLRQDESVYSLYSNIKT-TSTQTLEYGLNGDFNLTLLQV---PQIGGSSSS 135 IN+AL + D ++ SL + T + + +GD+N T L P G +++ Sbjct 750 DINKALSRVSTILDSALLSLVKELSINTRDEVTTFSFDGDYNFTGLMGCLGPNCG--ATT 807 Query 136 YRSAIEDLLFDKVTIADPGYMQGYDDCM-KQGPQSARDLICAQYVSGYKVLPPLYDPNME 194 YRSA DLL+DKV I DPG+MQ Y C+ Q S RDL+C Q +G VLPP+ P M+ Sbjct 808 YRSAFSDLLYDKVRITDPGFMQSYQKCIDSQWGGSIRDLLCTQTYNGIAVLPPIVSPAMQ 867 Query 195 AAYTSSLLGSIAGAGWTAGLSSFAAIPFAQSMFYRLNGVGITQQVLSENQKLIANKFNQA 254 A YTS L+G++A +G+T G++S IPFA + +RLNG+G+T QVL ENQKLIA+ FN A Sbjct 868 ALYTSLLVGAVASSGYTFGITSAGVIPFATQLQFRLNGIGVTTQVLVENQKLIASSFNNA 927 Query 255 LGAMQTGFTTSNLAFSKVQDAVNANAQALSKLASELSNTFGAISSSISDILARLDTVEQD 314 L +Q GFT +++A SK+QD +N +A L L +L N+FGAISSSI++I +RL+ + + Sbjct 928 LVNIQKGFTETSIALSKMQDVINQHAAQLHTLVVQLGNSFGAISSSINEIFSRLEGLAAN 987 Query 315 AQIDRLINGRLISLNAFVSQQLVRSETAARSAQLASDKVNECVKSQSKRNGFCGSGTHIV 374 A++DRLINGR++ LN +V+Q L+++ A LA+ K++ECVK+QS RN FCG+GTH++ Sbjct 988 AEVDRLINGRMMVLNTYVTQLLIQASEAKAQNALAAQKISECVKAQSLRNDFCGNGTHVL 1047 Query 375 SFVVNAPNGFYFFHVGYVPTNYTNVTAAYGLCNNNNPPLCIAPIDGYFITNQTTTYSVDT 434 S APNG F H Y PT Y V + GLC+N AP G F+ T Sbjct 1048 SIPQLAPNGVLFIHYAYTPTEYAFVQTSAGLCHNGTG---YAPRQGMFVLPNNTNM---- 1100 Query 435 EWYYTGSSFYKPEPITQANSRYVSS------DVKFDKLENNLPPPLLENSTDVDFKDE 486 W++T FY P I+ +N++ ++S V + LE ++P D DF+ E Sbjct 1101 -WHFTTMQFYNPVNISASNTQVLTSCSVNYTSVNYTVLEPSVP-------GDYDFQKE 1150 >RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltName: Full=E2; AltName: Full=Peplomer protein; Contains: RecName: Full=Spike protein S1; Contains: RecName: Full=Spike protein S2; Contains: RecName: Full=Spike protein S2'; Flags: Precursor [Bat SARS coronavirus HKU3] Sequence ID: Q3LZX1.1 Length: 1242 Range 1: 682 to 1110 Score:377 bits(969), Expect:5e-118, Method:Compositional matrix adjust., Identities:208/447(47%), Positives:279/447(62%), Gaps:21/447(4%) Query 31 AIPTNFSFSVTQEYIETSIQKVTVDCKQYVCNGFTRCEKLLVEYGQFCSKINQALHGANL 90 AIPTNFS SVT E + S+ K VDC Y+C C LL++YG FC+++N+AL G + Sbjct 682 AIPTNFSISVTTEVMPVSMAKTAVDCTMYICGDSLECSNLLLQYGSFCTQLNRALTGIAI 741 Query 91 RQDESVYSLYSNIKTTSTQTLEYGLNGDFNLT-LLQVPQIGGSSSSYRSAIEDLLFDKVT 149 QD++ +++ +K +T G FN + +L P S + RS IEDLLF+KVT Sbjct 742 EQDKNTQEVFAQVKQMY-KTPAIKDFGGFNFSQILPDP----SKPTKRSFIEDLLFNKVT 796 Query 150 IADPGYMQGYDDCMKQGPQSARDLICAQYVSGYKVLPPLYDPNMEAAYTSSLLGSIAGAG 209 +AD G+M+ Y DC+ G SARDLICAQ +G VLPPL M AAYT++L+ A AG Sbjct 797 LADAGFMKQYGDCL--GDVSARDLICAQKFNGLTVLPPLLTDEMVAAYTAALVSGTATAG 854 Query 210 WTAGLSSFAAIPFAQSMFYRLNGVGITQQVLSENQKLIANKFNQALGAMQTGFTTSNLAF 269 WT G + IPFA M YR NG+G+TQ VL ENQKLIAN+FN A+G +Q +++ A Sbjct 855 WTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQESLSSTASAL 914 Query 270 SKVQDAVNANAQALSKLASELSNTFGAISSSISDILARLDTVEQDAQIDRLINGRLISLN 329 K+QD VN NAQAL+ L +LS+ FGAISS ++DIL+RLD VE + QIDRLI GRL SL Sbjct 915 GKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQ 974 Query 330 AFVSQQLVRSETAARSAQLASDKVNECVKSQSKRNGFCGSGTHIVSFVVNAPNGFYFFHV 389 +V+QQL+R+ SA LA+ K++ECV QSKR FCG G H++SF +AP+G F HV Sbjct 975 TYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHV 1034 Query 390 GYVPTNYTNVTAAYGLCNNNNPPLCIAPIDGYFITNQTTTYSVDTEWYYTGSSFYKPEPI 449 YVP+ N T A +C+ P +G F++N T+ W+ T +FY P+ I Sbjct 1035 TYVPSQEKNFTTAPAICHEGKAYF---PREGVFVSNGTS-------WFITQRNFYSPQLI 1084 Query 450 TQANSRYVSS--DVKFDKLENNLPPPL 474 T N+ +VS DV + N + PL Sbjct 1085 TTDNT-FVSGNCDVVIGIINNTVYDPL 1110 >RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltName: Full=E2; AltName: Full=Peplomer protein; Contains: RecName: Full=Spike protein S1; Contains: RecName: Full=Spike protein S2; Contains: RecName: Full=Spike protein S2'; Flags: Precursor [Bat SARS CoV Rp3/2004] Sequence ID: Q3I5J5.1 Length: 1241 Range 1: 681 to 1109 Score:377 bits(967), Expect:1e-117, Method:Compositional matrix adjust., Identities:207/446(46%), Positives:277/446(62%), Gaps:19/446(4%) Query 31 AIPTNFSFSVTQEYIETSIQKVTVDCKQYVCNGFTRCEKLLVEYGQFCSKINQALHGANL 90 AIPTNFS SVT E + S+ K +VDC Y+C C LL++YG FC+++N+AL G + Sbjct 681 AIPTNFSISVTTEVMPVSMAKTSVDCTMYICGDSLECSNLLLQYGSFCTQLNRALSGIAI 740 Query 91 RQDESVYSLYSNIKTTSTQTLEYGLNGDFNLT-LLQVPQIGGSSSSYRSAIEDLLFDKVT 149 QD++ +++ +K +T G FN + +L P S + RS IEDLLF+KVT Sbjct 741 EQDKNTQEVFAQVKQMY-KTPAIKDFGGFNFSQILPDP----SKPTKRSFIEDLLFNKVT 795 Query 150 IADPGYMQGYDDCMKQGPQSARDLICAQYVSGYKVLPPLYDPNMEAAYTSSLLGSIAGAG 209 +AD G+M+ Y +C+ G SARDLICAQ +G VLPPL M AAYT++L+ A AG Sbjct 796 LADAGFMKQYGECL--GDISARDLICAQKFNGLTVLPPLLTDEMIAAYTAALVSGTATAG 853 Query 210 WTAGLSSFAAIPFAQSMFYRLNGVGITQQVLSENQKLIANKFNQALGAMQTGFTTSNLAF 269 WT G S IPFA M YR NG+G+TQ VL ENQK IAN+FN+A+ +Q TT++ A Sbjct 854 WTFGAGSALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTAL 913 Query 270 SKVQDAVNANAQALSKLASELSNTFGAISSSISDILARLDTVEQDAQIDRLINGRLISLN 329 K+QD VN NAQAL+ L +LS+ FGAISS ++DIL+RLD VE + QIDRLI GRL SL Sbjct 914 GKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQ 973 Query 330 AFVSQQLVRSETAARSAQLASDKVNECVKSQSKRNGFCGSGTHIVSFVVNAPNGFYFFHV 389 +V+QQL+R+ SA LA+ K++ECV QSKR FCG G H++SF AP+G F HV Sbjct 974 TYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQAAPHGVVFLHV 1033 Query 390 GYVPTNYTNVTAAYGLCNNNNPPLCIAPIDGYFITNQTTTYSVDTEWYYTGSSFYKPEPI 449 YVP+ N T A +C+ P +G F++N T+ W+ T +FY P+ I Sbjct 1034 TYVPSQERNFTTAPAICHEGKAYF---PREGVFVSNGTS-------WFITQRNFYSPQII 1083 Query 450 TQANSRYVSS-DVKFDKLENNLPPPL 474 T N+ S DV + N + PL Sbjct 1084 TTDNTFVAGSCDVVIGIINNTVYDPL 1109 >RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltName: Full=E2; AltName: Full=Peplomer protein; Contains: RecName: Full=Spike protein S1; Contains: RecName: Full=Spike protein S2; Contains: RecName: Full=Spike protein S2'; Flags: Precursor [Bat CoV 279/2005] Sequence ID: Q0Q475.1 Length: 1241 Range 1: 681 to 1109 Score:375 bits(964), Expect:2e-117, Method:Compositional matrix adjust., Identities:207/446(46%), Positives:277/446(62%), Gaps:19/446(4%) Query 31 AIPTNFSFSVTQEYIETSIQKVTVDCKQYVCNGFTRCEKLLVEYGQFCSKINQALHGANL 90 AIPTNFS SVT E + SI K +VDC Y+C C LL++YG FC+++N+AL G + Sbjct 681 AIPTNFSISVTTEVMPVSIAKTSVDCTMYICGDSLECSNLLLQYGSFCTQLNRALTGIAI 740 Query 91 RQDESVYSLYSNIKTTSTQTLEYGLNGDFNLT-LLQVPQIGGSSSSYRSAIEDLLFDKVT 149 QD++ +++ +K +T G FN + +L P S + RS IEDLLF+KVT Sbjct 741 EQDKNTQEVFAQVKQMY-KTPAIKDFGGFNFSQILPDP----SKPTKRSFIEDLLFNKVT 795 Query 150 IADPGYMQGYDDCMKQGPQSARDLICAQYVSGYKVLPPLYDPNMEAAYTSSLLGSIAGAG 209 +AD G+M+ Y +C+ G SARDLICAQ +G VLPPL M AAYT++L+ A AG Sbjct 796 LADAGFMKQYGECL--GDISARDLICAQKFNGLTVLPPLLTDEMIAAYTAALVSGTATAG 853 Query 210 WTAGLSSFAAIPFAQSMFYRLNGVGITQQVLSENQKLIANKFNQALGAMQTGFTTSNLAF 269 WT G S IPFA M YR NG+G+TQ VL ENQK IAN+FN+A+ +Q TT++ A Sbjct 854 WTFGAGSALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTAL 913 Query 270 SKVQDAVNANAQALSKLASELSNTFGAISSSISDILARLDTVEQDAQIDRLINGRLISLN 329 K+QD VN NAQAL+ L +LS+ FGAISS ++DIL+RLD VE + QIDRLI GRL SL Sbjct 914 GKLQDVVNDNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQ 973 Query 330 AFVSQQLVRSETAARSAQLASDKVNECVKSQSKRNGFCGSGTHIVSFVVNAPNGFYFFHV 389 +V+QQL+R+ SA LA+ K++ECV QSKR FCG G H++SF AP+G F HV Sbjct 974 TYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQAAPHGVVFLHV 1033 Query 390 GYVPTNYTNVTAAYGLCNNNNPPLCIAPIDGYFITNQTTTYSVDTEWYYTGSSFYKPEPI 449 YVP+ N T A +C+ P +G F++N T+ W+ T +FY P+ I Sbjct 1034 TYVPSQERNFTTAPAICHEGKAYF---PREGVFVSNGTS-------WFITQRNFYSPQII 1083 Query 450 TQANSRYVSS-DVKFDKLENNLPPPL 474 T N+ + DV + N + PL Sbjct 1084 TTDNTFVAGNCDVVIGIINNTVYDPL 1109 >RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltName: Full=E2; AltName: Full=Peplomer protein; Contains: RecName: Full=Spike protein S1; Contains: RecName: Full=Spike protein S2; Contains: RecName: Full=Spike protein S2'; Flags: Precursor [Severe acute respiratory syndrome-related coronavirus] Sequence ID: P59594.1 Length: 1255 Range 1: 693 to 1123 Score:374 bits(961), Expect:8e-117, Method:Compositional matrix adjust., Identities:208/450(46%), Positives:281/450(62%), Gaps:23/450(5%) Query 29 TAAIPTNFSFSVTQEYIETSIQKVTVDCKQYVCNGFTRCEKLLVEYGQFCSKINQALHGA 88 T AIPTNFS S+T E + S+ K +VDC Y+C T C LL++YG FC+++N+AL G Sbjct 693 TIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTECANLLLQYGSFCTQLNRALSGI 752 Query 89 NLRQDESVYSLYSNIKTT-STQTLEYGLNGDFNLT-LLQVPQIGGSSSSYRSAIEDLLFD 146 QD + +++ +K T TL+Y G FN + +L P + RS IEDLLF+ Sbjct 753 AAEQDRNTREVFAQVKQMYKTPTLKYF--GGFNFSQILPDPL----KPTKRSFIEDLLFN 806 Query 147 KVTIADPGYMQGYDDCMKQGPQSARDLICAQYVSGYKVLPPLYDPNMEAAYTSSLLGSIA 206 KVT+AD G+M+ Y +C+ G +ARDLICAQ +G VLPPL +M AAYT++L+ A Sbjct 807 KVTLADAGFMKQYGECL--GDINARDLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTA 864 Query 207 GAGWTAGLSSFAAIPFAQSMFYRLNGVGITQQVLSENQKLIANKFNQALGAMQTGFTTSN 266 AGWT G + IPFA M YR NG+G+TQ VL ENQK IAN+FN+A+ +Q TT++ Sbjct 865 TAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTS 924 Query 267 LAFSKVQDAVNANAQALSKLASELSNTFGAISSSISDILARLDTVEQDAQIDRLINGRLI 326 A K+QD VN NAQAL+ L +LS+ FGAISS ++DIL+RLD VE + QIDRLI GRL Sbjct 925 TALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQ 984 Query 327 SLNAFVSQQLVRSETAARSAQLASDKVNECVKSQSKRNGFCGSGTHIVSFVVNAPNGFYF 386 SL +V+QQL+R+ SA LA+ K++ECV QSKR FCG G H++SF AP+G F Sbjct 985 SLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQAAPHGVVF 1044 Query 387 FHVGYVPTNYTNVTAAYGLCNNNNPPLCIAPIDGYFITNQTTTYSVDTEWYYTGSSFYKP 446 HV YVP+ N T A +C+ P +G F+ N T+ W+ T +F+ P Sbjct 1045 LHVTYVPSQERNFTTAPAICHEGKAYF---PREGVFVFNGTS-------WFITQRNFFSP 1094 Query 447 EPITQANSRYVSS--DVKFDKLENNLPPPL 474 + IT N+ +VS DV + N + PL Sbjct 1095 QIITTDNT-FVSGNCDVVIGIINNTVYDPL 1123 >RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltName: Full=E2; AltName: Full=Peplomer protein; Contains: RecName: Full=Spike protein S1; Contains: RecName: Full=Spike protein S2; Contains: RecName: Full=Spike protein S2'; Flags: Precursor [Severe acute respiratory syndrome coronavirus 2] Sequence ID: P0DTC2.1 Length: 1273 Range 1: 713 to 1151 Score:374 bits(959), Expect:2e-116, Method:Compositional matrix adjust., Identities:210/460(46%), Positives:286/460(62%), Gaps:25/460(5%) Query 31 AIPTNFSFSVTQEYIETSIQKVTVDCKQYVCNGFTRCEKLLVEYGQFCSKINQALHGANL 90 AIPTNF+ SVT E + S+ K +VDC Y+C T C LL++YG FC+++N+AL G + Sbjct 713 AIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAV 772 Query 91 RQDESVYSLYSNIKTTSTQTLEYGLNGDFNLT-LLQVPQIGGSSSSYRSAIEDLLFDKVT 149 QD++ +++ +K +T G FN + +L P S S RS IEDLLF+KVT Sbjct 773 EQDKNTQEVFAQVKQIY-KTPPIKDFGGFNFSQILPDP----SKPSKRSFIEDLLFNKVT 827 Query 150 IADPGYMQGYDDCMKQGPQSARDLICAQYVSGYKVLPPLYDPNMEAAYTSSLLGSIAGAG 209 +AD G+++ Y DC+ G +ARDLICAQ +G VLPPL M A YTS+LL +G Sbjct 828 LADAGFIKQYGDCL--GDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSG 885 Query 210 WTAGLSSFAAIPFAQSMFYRLNGVGITQQVLSENQKLIANKFNQALGAMQTGFTTSNLAF 269 WT G + IPFA M YR NG+G+TQ VL ENQKLIAN+FN A+G +Q +++ A Sbjct 886 WTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTASAL 945 Query 270 SKVQDAVNANAQALSKLASELSNTFGAISSSISDILARLDTVEQDAQIDRLINGRLISLN 329 K+QD VN NAQAL+ L +LS+ FGAISS ++DIL+RLD VE + QIDRLI GRL SL Sbjct 946 GKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQ 1005 Query 330 AFVSQQLVRSETAARSAQLASDKVNECVKSQSKRNGFCGSGTHIVSFVVNAPNGFYFFHV 389 +V+QQL+R+ SA LA+ K++ECV QSKR FCG G H++SF +AP+G F HV Sbjct 1006 TYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHV 1065 Query 390 GYVPTNYTNVTAAYGLCNNNNPPLCIAPIDGYFITNQTTTYSVDTEWYYTGSSFYKPEPI 449 YVP N T A +C++ P +G F++N T W+ T +FY+P+ I Sbjct 1066 TYVPAQEKNFTTAPAICHDGKAHF---PREGVFVSN-------GTHWFVTQRNFYEPQII 1115 Query 450 TQANSRYVSS--DVKFDKLENNLPPPLLENSTDVD-FKDE 486 T N+ +VS DV + N + PL ++D FK+E Sbjct 1116 TTDNT-FVSGNCDVVIGIVNNTVYDPL---QPELDSFKEE 1151 >RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltName: Full=E2; AltName: Full=Peplomer protein; Contains: RecName: Full=Spike protein S1; Contains: RecName: Full=Spike protein S2; Contains: RecName: Full=Spike protein S2'; Flags: Precursor [Porcine hemagglutinating encephalomyelitis virus (strain IAF-404)] Sequence ID: Q8JSP8.1 Length: 1349 Range 1: 788 to 1232 Score:360 bits(923), Expect:8e-111, Method:Compositional matrix adjust., Identities:208/464(45%), Positives:278/464(59%), Gaps:28/464(6%) Query 32 IPTNFSFSVTQEYIETSIQKVTVDCKQYVCNGFTRCEKLLVEYGQFCSKINQALHGANLR 91 IP+ F+ +E+I+TS KVT+DC +VC + C + L EYG FC IN L N Sbjct 788 IPSEFTIGNLEEFIQTSSPKVTIDCATFVCGDYAACRQQLAEYGSFCENINAILIEVNEL 847 Query 92 QDESVYSLYSNIKTTSTQTLEYGLNGDFNLTLLQVPQIGG------SSSSYRSAIEDLLF 145 D + + +++ T + + +FN+ + + G + +S RSAIEDLLF Sbjct 848 LDTTQLQVANSLMNGVTLSTKIKDGINFNVDDINFSSVLGCLGSECNRASTRSAIEDLLF 907 Query 146 DKVTIADPGYMQGYDDCMKQGPQSARDLICAQYVSGYKVLPPLYDPNMEAAYTSSLLGSI 205 DKV ++D G++Q Y++C G RDLIC Q +G KVLPPL N + YTS+ + Sbjct 908 DKVKLSDVGFVQAYNNCT--GGAEIRDLICVQSYNGIKVLPPLLSENQISGYTSAATAAS 965 Query 206 AGAGWTAGLSSFAAIPFAQSMFYRLNGVGITQQVLSENQKLIANKFNQALGAMQTGFTTS 265 WTA A +PF ++ YR+NG+G+T VLS+NQKLIA+ FN AL ++Q GF + Sbjct 966 LFPPWTAA----AGVPFYLNVQYRINGLGVTMDVLSQNQKLIASAFNNALDSIQEGFDAT 1021 Query 266 NLAFSKVQDAVNANAQALSKLASELSNTFGAISSSISDILARLDTVEQDAQIDRLINGRL 325 N A K+Q VNANA+AL+ L +LSN FGAIS+S+ +IL+RLD +E AQIDRLINGRL Sbjct 1022 NSALVKIQAVVNANAEALNNLLQQLSNRFGAISASLQEILSRLDALEAKAQIDRLINGRL 1081 Query 326 ISLNAFVSQQLVRSETAARSAQLASDKVNECVKSQSKRNGFCGSGTHIVSFVVNAPNGFY 385 +LNA+VSQQL S SA A +KVNECVKSQS R FCG+G HI+S V NAP G Y Sbjct 1082 TALNAYVSQQLSDSTLVKFSAAQAIEKVNECVKSQSSRINFCGNGNHIISLVQNAPYGLY 1141 Query 386 FFHVGYVPTNYTNVTAAYGLCNNNNPPLCIAPIDGYFITNQTTTYSVDTEWYYTGSSFYK 445 F H YVPT Y + GLC + + I+P GYFI +V+ W +TGS +Y Sbjct 1142 FIHFSYVPTKYVTAKVSPGLCIAGD--IGISPKSGYFI-------NVNNSWMFTGSGYYY 1192 Query 446 PEPITQANSRYVSS-DVKFDKLENNLPPPLLENSTD--VDFKDE 486 PEPITQ N +S+ V + K P +L ST DFK+E Sbjct 1193 PEPITQNNVVVMSTCAVNYTK----APDLMLNTSTPNLPDFKEE 1232 >RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltName: Full=E2; AltName: Full=Peplomer protein; Contains: RecName: Full=Spike protein S1; Contains: RecName: Full=Spike protein S2; Contains: RecName: Full=Spike protein S2'; Flags: Precursor [Human coronavirus OC43] Sequence ID: P36334.1 Length: 1353 Range 1: 771 to 1210 Score:358 bits(920), Expect:2e-110, Method:Compositional matrix adjust., Identities:204/455(45%), Positives:269/455(59%), Gaps:27/455(5%) Query 17 PIVVTPINSSG------FTAAIPTNFSFSVTQEYIETSIQKVTVDCKQYVCNGFTRCEKL 70 P V +N S + IP+ F+ E+I+TS KVT+DC +VC + C+ Sbjct 771 PFTVNSVNDSLEPVGGLYEIQIPSEFTIGNMVEFIQTSSPKVTIDCAAFVCGDYAACKSQ 830 Query 71 LVEYGQFCSKINQALHGANLRQDESVYSLYSNIKTTSTQTLEYGLNGDFNLTLLQVPQIG 130 LVEYG FC IN L N D + + +++ T + + +FN+ + + Sbjct 831 LVEYGSFCDNINAILTEVNELLDTTQLQVANSLMNGVTLSTKLKDGVNFNVDDINFSPVL 890 Query 131 G------SSSSYRSAIEDLLFDKVTIADPGYMQGYDDCMKQGPQSARDLICAQYVSGYKV 184 G S +S RSAIEDLLFDKV ++D G+++ Y++C G RDLIC Q G KV Sbjct 891 GCLGSECSKASSRSAIEDLLFDKVKLSDVGFVEAYNNC--TGGAEIRDLICVQSYKGIKV 948 Query 185 LPPLYDPNMEAAYTSSLLGSIAGAGWTAGLSSFAAIPFAQSMFYRLNGVGITQQVLSENQ 244 LPPL N + YT + + WTA A +PF ++ YR+NG+G+T VLS+NQ Sbjct 949 LPPLLSENQISGYTLAATSASLFPPWTAA----AGVPFYLNVQYRINGLGVTMDVLSQNQ 1004 Query 245 KLIANKFNQALGAMQTGFTTSNLAFSKVQDAVNANAQALSKLASELSNTFGAISSSISDI 304 KLIAN FN AL A+Q GF +N A K+Q VNANA+AL+ L +LSN FGAIS+S+ +I Sbjct 1005 KLIANAFNNALYAIQEGFDATNSALVKIQAVVNANAEALNNLLQQLSNRFGAISASLQEI 1064 Query 305 LARLDTVEQDAQIDRLINGRLISLNAFVSQQLVRSETAARSAQLASDKVNECVKSQSKRN 364 L+RLD +E +AQIDRLINGRL +LNA+VSQQL S SA A +KVNECVKSQS R Sbjct 1065 LSRLDALEAEAQIDRLINGRLTALNAYVSQQLSDSTLVKFSAAQAMEKVNECVKSQSSRI 1124 Query 365 GFCGSGTHIVSFVVNAPNGFYFFHVGYVPTNYTNVTAAYGLCNNNNPPLCIAPIDGYFIT 424 FCG+G HI+S V NAP G YF H YVPT Y + GLC + IAP GYF+ Sbjct 1125 NFCGNGNHIISLVQNAPYGLYFIHFSYVPTKYVTARVSPGLCIAGDRG--IAPKSGYFV- 1181 Query 425 NQTTTYSVDTEWYYTGSSFYKPEPITQANSRYVSS 459 +V+ W YTGS +Y PEPIT+ N +S+ Sbjct 1182 ------NVNNTWMYTGSGYYYPEPITENNVVVMST 1210 >RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltName: Full=E2; AltName: Full=Peplomer protein; Contains: RecName: Full=Spike protein S1; Contains: RecName: Full=Spike protein S2; Contains: RecName: Full=Spike protein S2'; Flags: Precursor [Porcine hemagglutinating encephalomyelitis virus (strain 67N)] Sequence ID: Q8BB25.1 Length: 1349 Range 1: 788 to 1232 Score:358 bits(919), Expect:2e-110, Method:Compositional matrix adjust., Identities:208/464(45%), Positives:277/464(59%), Gaps:28/464(6%) Query 32 IPTNFSFSVTQEYIETSIQKVTVDCKQYVCNGFTRCEKLLVEYGQFCSKINQALHGANLR 91 IP+ F+ +E+I+T KVT+DC +VC + C + L EYG FC IN L N Sbjct 788 IPSEFTIGNLEEFIQTRSPKVTIDCATFVCGDYAACRQQLAEYGSFCENINAILTEVNEL 847 Query 92 QDESVYSLYSNIKTTSTQTLEYGLNGDFNLTLLQVPQIGG------SSSSYRSAIEDLLF 145 D + + +++ T + + +FN+ + + G + +S RSAIEDLLF Sbjct 848 LDTTQLQVANSLMNGVTLSTKIKDGINFNVDDINFSPVLGCLGSECNRASTRSAIEDLLF 907 Query 146 DKVTIADPGYMQGYDDCMKQGPQSARDLICAQYVSGYKVLPPLYDPNMEAAYTSSLLGSI 205 DKV ++D G++Q Y++C G RDLIC Q +G KVLPPL N + YT + + Sbjct 908 DKVKLSDVGFVQAYNNCT--GGAEIRDLICVQSYNGIKVLPPLLSENQISGYTLAATAAS 965 Query 206 AGAGWTAGLSSFAAIPFAQSMFYRLNGVGITQQVLSENQKLIANKFNQALGAMQTGFTTS 265 WTA A +PF ++ YR+NG+G+T VLS+NQKLIA+ FN AL A+Q GF + Sbjct 966 LFPPWTAA----AGVPFYLNVQYRINGLGVTMDVLSQNQKLIASAFNNALDAIQEGFDAT 1021 Query 266 NLAFSKVQDAVNANAQALSKLASELSNTFGAISSSISDILARLDTVEQDAQIDRLINGRL 325 N A K+Q VNANA+AL+ L +LSN FGAIS+S+ +IL+RLD +E AQIDRLINGRL Sbjct 1022 NSALVKIQAVVNANAEALNNLLQQLSNRFGAISASLQEILSRLDALEAKAQIDRLINGRL 1081 Query 326 ISLNAFVSQQLVRSETAARSAQLASDKVNECVKSQSKRNGFCGSGTHIVSFVVNAPNGFY 385 +LNA+VSQQL S SA A +KVNECVKSQS R FCG+G HI+S V NAP G Y Sbjct 1082 TALNAYVSQQLSDSTLVKFSAAQAIEKVNECVKSQSSRINFCGNGNHIISLVQNAPYGLY 1141 Query 386 FFHVGYVPTNYTNVTAAYGLCNNNNPPLCIAPIDGYFITNQTTTYSVDTEWYYTGSSFYK 445 F H YVPT Y + GLC + + I+P GYFI +V+ W +TGSS+Y Sbjct 1142 FIHFSYVPTKYVTAKVSPGLCIAGD--IGISPKSGYFI-------NVNNSWMFTGSSYYY 1192 Query 446 PEPITQANSRYVSS-DVKFDKLENNLPPPLLENSTD--VDFKDE 486 PEPITQ N +S+ V + K P +L ST DFK+E Sbjct 1193 PEPITQNNVVVMSTCAVNYTK----APDLMLNTSTPNLPDFKEE 1232 >RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltName: Full=E2; AltName: Full=Peplomer protein; Contains: RecName: Full=Spike protein S1; Contains: RecName: Full=Spike protein S2; Contains: RecName: Full=Spike protein S2'; Flags: Precursor [Bovine coronavirus (strain LSU-94LSS-051)] Sequence ID: Q9QAR5.1 Length: 1363 Range 1: 802 to 1246 Score:357 bits(917), Expect:5e-110, Method:Compositional matrix adjust., Identities:209/470(44%), Positives:274/470(58%), Gaps:40/470(8%) Query 32 IPTNFSFSVTQEYIETSIQKVTVDCKQYVCNGFTRCEKLLVEYGQFCSKINQALHGANLR 91 IP+ F+ +E+I+TS KVT+DC +VC + C+ LVEYG FC IN L N Sbjct 802 IPSEFTIGNMEEFIQTSSPKVTIDCSAFVCGDYAACKSQLVEYGSFCDNINAILTEVNEL 861 Query 92 QDESVYSLYSNIKTTSTQTLEYGLNGDFNLTLLQV-PQIGGSSS-----SYRSAIEDLLF 145 D + + +++ T + + +FN+ + P +G S S RSAIEDLLF Sbjct 862 LDTTQLQVANSLMNGVTLSTKLKDGVNFNVDDINFSPVLGCLGSDCNKVSSRSAIEDLLF 921 Query 146 DKVTIADPGYMQGYDDCMKQGPQSARDLICAQYVSGYKVLPPLYDPNMEAAYTSSLLGSI 205 KV ++D G+++ Y++C G RDLIC Q +G KVLPPL N + YT + + Sbjct 922 SKVKLSDVGFVEAYNNC--TGGAEIRDLICVQSYNGIKVLPPLLSENQISGYTLAATSAS 979 Query 206 AGAGWTAGLSSFAAIPFAQSMFYRLNGVGITQQVLSENQKLIANKFNQALGAMQTGFTTS 265 W+A A +PF ++ YR+NG+G+T VLS+NQKLIAN FN ALGA+Q GF + Sbjct 980 LFPPWSAA----AGVPFYLNVQYRINGIGVTMDVLSQNQKLIANAFNNALGAIQEGFDAT 1035 Query 266 NLAFSKVQDAVNANAQALSKLASELSNTFGAISSSISDILARLDTVEQDAQIDRLINGRL 325 N A K+Q VNANA+AL+ L +LSN FGAISSS+ +IL+RLD +E AQIDRLINGRL Sbjct 1036 NSALVKIQAVVNANAEALNNLLQQLSNRFGAISSSLQEILSRLDALEAQAQIDRLINGRL 1095 Query 326 ISLNAFVSQQLVRSETAARSAQLASDKVNECVKSQSKRNGFCGSGTHIVSFVVNAPNGFY 385 +LNA+VSQQL S SA A +KVNECVKSQS R FCG+G HI+S V NAP G Y Sbjct 1096 TALNAYVSQQLSDSTLVKFSAAQAMEKVNECVKSQSSRINFCGNGNHIISLVQNAPYGLY 1155 Query 386 FFHVGYVPTNYTNVTAAYGLCNNNNPPLCIAPIDGYFITNQTTTYSVDTEWYYTGSSFYK 445 F H YVPT Y + GLC + IAP GYF+ +V+ W +TGS +Y Sbjct 1156 FIHFSYVPTKYVTAKVSPGLCIAGDRG--IAPKSGYFV-------NVNNTWMFTGSGYYY 1206 Query 446 PEPITQANSRYVSS---------DVKFDKLENNLPPPLLENSTDVDFKDE 486 PEPIT N +S+ DV + NLP DFK+E Sbjct 1207 PEPITGNNVVVMSTCAVNYTKAPDVMLNISTPNLP----------DFKEE 1246 >RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltName: Full=E2; AltName: Full=Peplomer protein; Contains: RecName: Full=Spike protein S1; Contains: RecName: Full=Spike protein S2; Contains: RecName: Full=Spike protein S2'; Flags: Precursor [Bovine coronavirus (strain OK-0514-3)] Sequence ID: Q9QAQ8.1 Length: 1363 Range 1: 802 to 1246 Score:357 bits(917), Expect:6e-110, Method:Compositional matrix adjust., Identities:209/470(44%), Positives:274/470(58%), Gaps:40/470(8%) Query 32 IPTNFSFSVTQEYIETSIQKVTVDCKQYVCNGFTRCEKLLVEYGQFCSKINQALHGANLR 91 IP+ F+ +E+I+TS KVT+DC +VC + C+ LVEYG FC IN L N Sbjct 802 IPSEFTIGNMEEFIQTSSPKVTIDCSAFVCGDYAACKSQLVEYGSFCDNINAILTEVNEL 861 Query 92 QDESVYSLYSNIKTTSTQTLEYGLNGDFNLTLLQV-PQIGGSSS-----SYRSAIEDLLF 145 D + + +++ T + + +FN+ + P +G S S RSAIEDLLF Sbjct 862 LDTTQLQVANSLMNGVTLSTKLKDGVNFNVDDINFSPVLGCLGSDCNKVSSRSAIEDLLF 921 Query 146 DKVTIADPGYMQGYDDCMKQGPQSARDLICAQYVSGYKVLPPLYDPNMEAAYTSSLLGSI 205 KV ++D G+++ Y++C G RDLIC Q +G KVLPPL N + YT + + Sbjct 922 SKVKLSDVGFVEAYNNC--TGGAEIRDLICVQSYNGIKVLPPLLSENQISGYTLAATSAS 979 Query 206 AGAGWTAGLSSFAAIPFAQSMFYRLNGVGITQQVLSENQKLIANKFNQALGAMQTGFTTS 265 W+A A +PF ++ YR+NG+G+T VLS+NQKLIAN FN ALGA+Q GF + Sbjct 980 LFPPWSAA----AGVPFYLNVQYRINGIGVTMDVLSQNQKLIANAFNNALGAIQEGFDAT 1035 Query 266 NLAFSKVQDAVNANAQALSKLASELSNTFGAISSSISDILARLDTVEQDAQIDRLINGRL 325 N A K+Q VNANA+AL+ L +LSN FGAISSS+ +IL+RLD +E AQIDRLINGRL Sbjct 1036 NSALVKIQAVVNANAEALNNLLQQLSNRFGAISSSLQEILSRLDALEAQAQIDRLINGRL 1095 Query 326 ISLNAFVSQQLVRSETAARSAQLASDKVNECVKSQSKRNGFCGSGTHIVSFVVNAPNGFY 385 +LNA+VSQQL S SA A +KVNECVKSQS R FCG+G HI+S V NAP G Y Sbjct 1096 TALNAYVSQQLSDSTLVKFSAAQAMEKVNECVKSQSSRINFCGNGNHIISLVQNAPYGLY 1155 Query 386 FFHVGYVPTNYTNVTAAYGLCNNNNPPLCIAPIDGYFITNQTTTYSVDTEWYYTGSSFYK 445 F H YVPT Y + GLC + IAP GYF+ +V+ W +TGS +Y Sbjct 1156 FIHFSYVPTKYVTAKVSPGLCIAGDRG--IAPKSGYFV-------NVNNTWMFTGSGYYY 1206 Query 446 PEPITQANSRYVSS---------DVKFDKLENNLPPPLLENSTDVDFKDE 486 PEPIT N +S+ DV + NLP DFK+E Sbjct 1207 PEPITGNNVVVMSTCAVNYTKAPDVMLNISTPNLP----------DFKEE 1246 >RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltName: Full=E2; AltName: Full=Peplomer protein; Contains: RecName: Full=Spike protein S1; Contains: RecName: Full=Spike protein S2; Contains: RecName: Full=Spike protein S2'; Flags: Precursor [Bovine enteric coronavirus (strain 98TXSF-110-ENT)] Sequence ID: Q91A26.1 Length: 1363 Range 1: 802 to 1254 Score:356 bits(914), Expect:2e-109, Method:Compositional matrix adjust., Identities:208/470(44%), Positives:275/470(58%), Gaps:32/470(6%) Query 32 IPTNFSFSVTQEYIETSIQKVTVDCKQYVCNGFTRCEKLLVEYGQFCSKINQALHGANLR 91 IP+ F+ +E+I+TS KVT+DC +VC + C+ LVEYG FC IN L N Sbjct 802 IPSEFTIGNMEEFIQTSSPKVTIDCSAFVCGDYAACKSQLVEYGSFCDNINAILTEVNEL 861 Query 92 QDESVYSLYSNIKTTSTQTLEYGLNGDFNLTLLQV-PQIGGSSS-----SYRSAIEDLLF 145 D + + +++ T + + +FN+ + P +G S S RSAIEDLLF Sbjct 862 LDTTQLQVANSLMNGVTLSTKLKDGVNFNVDDINFSPVLGCLGSDCNKVSSRSAIEDLLF 921 Query 146 DKVTIADPGYMQGYDDCMKQGPQSARDLICAQYVSGYKVLPPLYDPNMEAAYTSSLLGSI 205 KV ++D G+++ Y++C G RDLIC Q +G KVLPPL N + YT + + Sbjct 922 SKVKLSDVGFVEAYNNC--TGGAEIRDLICVQSYNGIKVLPPLLSENQISGYTLAATSAS 979 Query 206 AGAGWTAGLSSFAAIPFAQSMFYRLNGVGITQQVLSENQKLIANKFNQALGAMQTGFTTS 265 W+A A +PF ++ YR+NG+G+T VLS+NQKLIAN FN ALGA+Q GF + Sbjct 980 LFPPWSAA----AGVPFYLNVQYRINGIGVTMDVLSQNQKLIANAFNNALGAIQEGFDAT 1035 Query 266 NLAFSKVQDAVNANAQALSKLASELSNTFGAISSSISDILARLDTVEQDAQIDRLINGRL 325 N A K+Q VNANA+AL+ L +LSN FGAISSS+ +IL+RLD +E AQIDRLINGRL Sbjct 1036 NSALVKIQAVVNANAEALNNLLQQLSNRFGAISSSLQEILSRLDALEAQAQIDRLINGRL 1095 Query 326 ISLNAFVSQQLVRSETAARSAQLASDKVNECVKSQSKRNGFCGSGTHIVSFVVNAPNGFY 385 +LNA+VSQQL S SA A +KVNECVKSQS R FCG+G HI+S V NAP G Y Sbjct 1096 TALNAYVSQQLSDSTLVKFSAAQAMEKVNECVKSQSSRINFCGNGNHIISLVQNAPYGLY 1155 Query 386 FFHVGYVPTNYTNVTAAYGLCNNNNPPLCIAPIDGYFITNQTTTYSVDTEWYYTGSSFYK 445 F H YVPT Y + GLC + IAP GYF+ +V+ W +TGS +Y Sbjct 1156 FIHFSYVPTKYVTAKVSPGLCIAGDRG--IAPKSGYFV-------NVNNTWMFTGSGYYY 1206 Query 446 PEPITQANSRYVSS---------DVKFDKLENNLPPPLLENSTDVDFKDE 486 PEPIT N +S+ DV + NL P + D FK++ Sbjct 1207 PEPITGNNVVVMSTCAVNYTKAPDVMLNISTPNL--PYFKEELDQWFKNQ 1254 >RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltName: Full=E2; AltName: Full=Peplomer protein; Contains: RecName: Full=Spike protein S1; Contains: RecName: Full=Spike protein S2; Contains: RecName: Full=Spike protein S2'; Flags: Precursor [Bovine respiratory coronavirus (strain 98TXSF-110-LUN)] Sequence ID: Q8V436.1 Length: 1363 Range 1: 802 to 1246 Score:355 bits(911), Expect:5e-109, Method:Compositional matrix adjust., Identities:208/470(44%), Positives:272/470(57%), Gaps:40/470(8%) Query 32 IPTNFSFSVTQEYIETSIQKVTVDCKQYVCNGFTRCEKLLVEYGQFCSKINQALHGANLR 91 IP+ F+ +E+I+TS KVT+DC +VC + C+ LVEYG FC IN L N Sbjct 802 IPSEFTIGNMEEFIQTSSPKVTIDCSAFVCGDYAACKSQLVEYGSFCDNINAILTEVNEL 861 Query 92 QDESVYSLYSNIKTTSTQTLEYGLNGDFNLTLLQV-PQIGGSSS-----SYRSAIEDLLF 145 D + + +++ T + + +FN+ + P +G S S RSAIEDLLF Sbjct 862 LDTTQLQVANSLMNGVTLSTKLKDGVNFNVDDINFSPVLGCLGSDCNKVSSRSAIEDLLF 921 Query 146 DKVTIADPGYMQGYDDCMKQGPQSARDLICAQYVSGYKVLPPLYDPNMEAAYTSSLLGSI 205 KV ++D G+++ Y++C G RDLIC Q +G KVLPPL N + YT + + Sbjct 922 SKVKLSDVGFVEAYNNC--TGGAEIRDLICVQSYNGIKVLPPLLSENQISGYTLAATSAS 979 Query 206 AGAGWTAGLSSFAAIPFAQSMFYRLNGVGITQQVLSENQKLIANKFNQALGAMQTGFTTS 265 W+A A +PF ++ YR+NG+G+T VLS+NQKLIAN FN ALGA+Q GF + Sbjct 980 LFPPWSAA----AGVPFYLNVQYRINGIGVTMDVLSQNQKLIANAFNNALGAIQEGFDAT 1035 Query 266 NLAFSKVQDAVNANAQALSKLASELSNTFGAISSSISDILARLDTVEQDAQIDRLINGRL 325 N A K+Q VNANA+ L+ L +LSN FGAISSS+ +IL+RLD +E AQIDRLINGRL Sbjct 1036 NSALVKIQAVVNANAETLNNLLQQLSNRFGAISSSLQEILSRLDALEAQAQIDRLINGRL 1095 Query 326 ISLNAFVSQQLVRSETAARSAQLASDKVNECVKSQSKRNGFCGSGTHIVSFVVNAPNGFY 385 +LNA+VSQQL S SA A +KVNECVKSQS R FCG+G HI+S V NAP G Y Sbjct 1096 TALNAYVSQQLSDSTLVKFSAAQAMEKVNECVKSQSSRINFCGNGNHIISLVQNAPYGLY 1155 Query 386 FFHVGYVPTNYTNVTAAYGLCNNNNPPLCIAPIDGYFITNQTTTYSVDTEWYYTGSSFYK 445 F H YVPT Y + GLC IAP GYF+ +V+ W +TGS +Y Sbjct 1156 FIHFSYVPTKYVTAKVSPGLCIAGGRG--IAPKSGYFV-------NVNNTWMFTGSGYYY 1206 Query 446 PEPITQANSRYVSS---------DVKFDKLENNLPPPLLENSTDVDFKDE 486 PEPIT N +S+ DV + NLP DFK+E Sbjct 1207 PEPITGNNVVVMSTCAVNYTKAPDVMLNISTPNLP----------DFKEE 1246 >RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltName: Full=E2; AltName: Full=Peplomer protein; Contains: RecName: Full=Spike protein S1; Contains: RecName: Full=Spike protein S2; Contains: RecName: Full=Spike protein S2'; Flags: Precursor [Bovine coronavirus strain vaccine] Sequence ID: P25194.1 Length: 1363 Range 1: 802 to 1246 Score:354 bits(909), Expect:8e-109, Method:Compositional matrix adjust., Identities:208/465(45%), Positives:275/465(59%), Gaps:30/465(6%) Query 32 IPTNFSFSVTQEYIETSIQKVTVDCKQYVCNGFTRCEKLLVEYGQFCSKINQALHGANLR 91 IP+ F+ +E+I+TS KVT+DC +VC + C+ LVEYG FC IN L N Sbjct 802 IPSEFTIGNMEEFIQTSSPKVTIDCSAFVCGDYAACKSQLVEYGSFCDNINAILTEVNEL 861 Query 92 QDESVYSLYSNIKTTSTQTLEYGLNGDFNLTLLQV-PQIGGSSS-----SYRSAIEDLLF 145 D + + +++ T + + +FN+ + P +G S S RSAIEDLLF Sbjct 862 LDTTQLQVANSLMNGVTLSTKLKDGVNFNVDDINFSPVLGCLGSDCNKVSSRSAIEDLLF 921 Query 146 DKVTIADPGYMQGYDDCMKQGPQSARDLICAQYVSGYKVLPPLYDPNMEAAYTSSLLGSI 205 KV ++D G+++ Y++C G RDLIC Q +G KVLPPL N + YT + + Sbjct 922 SKVKLSDVGFVEAYNNC--TGGAEIRDLICVQSYNGIKVLPPLLSVNQISGYTLAATSAS 979 Query 206 AGAGWTAGLSSFAAIPFAQSMFYRLNGVGITQQVLSENQKLIANKFNQALGAMQTGFTTS 265 W+A A +PF ++ YR+NG+G+T VLS+NQKLIAN FN AL A+Q GF + Sbjct 980 LFPPWSAA----AGVPFYLNVQYRINGIGVTMDVLSQNQKLIANAFNNALDAIQEGFDAT 1035 Query 266 NLAFSKVQDAVNANAQALSKLASELSNTFGAISSSISDILARLDTVEQDAQIDRLINGRL 325 N A K+Q VNANA+AL+ L +LSN FGAISSS+ +IL+RLD +E AQIDRLINGRL Sbjct 1036 NSALVKIQAVVNANAEALNNLLQQLSNRFGAISSSLQEILSRLDALEAQAQIDRLINGRL 1095 Query 326 ISLNAFVSQQLVRSETAARSAQLASDKVNECVKSQSKRNGFCGSGTHIVSFVVNAPNGFY 385 +LNA+VSQQL S SA A +KVNECVKSQS R FCG+G HI+S V NAP G Y Sbjct 1096 TALNAYVSQQLSDSTLVKFSAAQAMEKVNECVKSQSSRINFCGNGNHIISLVQNAPYGLY 1155 Query 386 FFHVGYVPTNYTNVTAAYGLCNNNNPPLCIAPIDGYFITNQTTTYSVDTEWYYTGSSFYK 445 F H YVPT Y + GLC + IAP GYF+ +V+ W +TGS +Y Sbjct 1156 FIHFSYVPTKYVTAKVSPGLCIAGDRG--IAPKSGYFV-------NVNNTWMFTGSGYYY 1206 Query 446 PEPITQANSRYVSS-DVKFDKLEN---NLPPPLLENSTDVDFKDE 486 PEPIT N +S+ V + K + N+ P L DFK+E Sbjct 1207 PEPITGNNVVVMSTCAVNYTKAPDVMLNISTPNLH-----DFKEE 1246 >RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltName: Full=E2; AltName: Full=Peplomer protein; Contains: RecName: Full=Spike protein S1; Contains: RecName: Full=Spike protein S2; Contains: RecName: Full=Spike protein S2'; Flags: Precursor [Bovine coronavirus strain L9] Sequence ID: P25191.1 Length: 1363 Range 1: 802 to 1246 Score:353 bits(906), Expect:2e-108, Method:Compositional matrix adjust., Identities:207/465(45%), Positives:273/465(58%), Gaps:30/465(6%) Query 32 IPTNFSFSVTQEYIETSIQKVTVDCKQYVCNGFTRCEKLLVEYGQFCSKINQALHGANLR 91 IP+ F+ +E+I+TS KVT+DC +VC + C+ LVEYG FC IN L N Sbjct 802 IPSEFTIGNMEEFIQTSSPKVTIDCSAFVCGDYAACKSQLVEYGSFCDNINAILTEVNEL 861 Query 92 QDESVYSLYSNIKTTSTQTLEYGLNGDFNLTLLQV-PQIGGSSS-----SYRSAIEDLLF 145 D + + +++ T + + +FN+ + P +G S S RSAIEDLLF Sbjct 862 LDTTQLQVANSLMNGVTLSTKLKDGVNFNVDDINFSPVLGCLGSDCNKVSSRSAIEDLLF 921 Query 146 DKVTIADPGYMQGYDDCMKQGPQSARDLICAQYVSGYKVLPPLYDPNMEAAYTSSLLGSI 205 KV ++D G+++ Y++C G RDLIC Q +G KVLPPL N + YT + + Sbjct 922 SKVKLSDVGFVEAYNNC--TGGAEIRDLICVQSYNGIKVLPPLLSVNQISGYTLAATSAS 979 Query 206 AGAGWTAGLSSFAAIPFAQSMFYRLNGVGITQQVLSENQKLIANKFNQALGAMQTGFTTS 265 W+A A +PF ++ YR+NG+G+T VLS+NQKLIAN FN AL A+Q GF + Sbjct 980 LFPPWSAA----AGVPFYLNVQYRINGIGVTMDVLSQNQKLIANAFNNALDAIQEGFDAT 1035 Query 266 NLAFSKVQDAVNANAQALSKLASELSNTFGAISSSISDILARLDTVEQDAQIDRLINGRL 325 N A K+Q VNANA+AL+ L +LSN FGAISSS+ +IL+RLD +E AQIDRLINGRL Sbjct 1036 NSALVKIQAVVNANAEALNNLLQQLSNRFGAISSSLQEILSRLDALEAQAQIDRLINGRL 1095 Query 326 ISLNAFVSQQLVRSETAARSAQLASDKVNECVKSQSKRNGFCGSGTHIVSFVVNAPNGFY 385 +LNA+VSQQL S SA A +KVNECVKSQS R FCG+G HI+S V NAP G Y Sbjct 1096 TALNAYVSQQLSDSTLVKFSAAQAMEKVNECVKSQSSRINFCGNGNHIISLVQNAPYGLY 1155 Query 386 FFHVGYVPTNYTNVTAAYGLCNNNNPPLCIAPIDGYFITNQTTTYSVDTEWYYTGSSFYK 445 F H YVPT Y + GLC + IAP GYF+ +V+ W +TGS +Y Sbjct 1156 FIHFSYVPTKYVTAKVSPGLCIAGDRG--IAPKSGYFV-------NVNNTWMFTGSGYYY 1206 Query 446 PEPITQANSRYVSSD----VKFDKLENNLPPPLLENSTDVDFKDE 486 PEPIT N +S+ K + N+ P L DFK+E Sbjct 1207 PEPITGNNVVVMSTCAANYTKAPDVMLNISTPNLH-----DFKEE 1246 >RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltName: Full=E2; AltName: Full=Peplomer protein; Contains: RecName: Full=Spike protein S1; Contains: RecName: Full=Spike protein S2; Contains: RecName: Full=Spike protein S2'; Flags: Precursor [Bovine coronavirus LY-138] Sequence ID: P25192.1 Length: 1363 Range 1: 802 to 1246 Score:353 bits(906), Expect:2e-108, Method:Compositional matrix adjust., Identities:207/470(44%), Positives:272/470(57%), Gaps:40/470(8%) Query 32 IPTNFSFSVTQEYIETSIQKVTVDCKQYVCNGFTRCEKLLVEYGQFCSKINQALHGANLR 91 IP+ F+ +E+I+ S KVT+DC +VC + C+ LVEYG FC IN L N Sbjct 802 IPSEFTIGNMEEFIQISSPKVTIDCSAFVCGDYAACKSQLVEYGSFCDNINAILTEVNEL 861 Query 92 QDESVYSLYSNIKTTSTQTLEYGLNGDFNLTLLQV-PQIGGSSS-----SYRSAIEDLLF 145 D + + +++ T + + +FN+ + P +G S S RSAIEDLLF Sbjct 862 LDTTQLQVANSLMNGVTLSTKLKDGVNFNVDDINFSPVLGCLGSDCNKVSSRSAIEDLLF 921 Query 146 DKVTIADPGYMQGYDDCMKQGPQSARDLICAQYVSGYKVLPPLYDPNMEAAYTSSLLGSI 205 KV ++D G+++ Y++C G RDLIC Q +G KVLPPL N + YT + + Sbjct 922 SKVKLSDVGFVEAYNNC--TGGAEIRDLICVQSYNGIKVLPPLLSENQISGYTLAATSAS 979 Query 206 AGAGWTAGLSSFAAIPFAQSMFYRLNGVGITQQVLSENQKLIANKFNQALGAMQTGFTTS 265 W+A A +PF ++ YR+NG+G+T VLS+NQKLIAN FN AL A+Q GF + Sbjct 980 LFPPWSAA----AGVPFYLNVQYRINGIGVTMDVLSQNQKLIANAFNNALDAIQEGFDAT 1035 Query 266 NLAFSKVQDAVNANAQALSKLASELSNTFGAISSSISDILARLDTVEQDAQIDRLINGRL 325 N A K+Q VNANA+AL+ L +LSN FGAISSS+ +IL+RLD +E AQIDRLINGRL Sbjct 1036 NSALVKIQAVVNANAEALNNLLQQLSNRFGAISSSLQEILSRLDALEAQAQIDRLINGRL 1095 Query 326 ISLNAFVSQQLVRSETAARSAQLASDKVNECVKSQSKRNGFCGSGTHIVSFVVNAPNGFY 385 +LNA+VSQQL S SA A +KVNECVKSQS R FCG+G HI+S V NAP G Y Sbjct 1096 TALNAYVSQQLSDSTLVKFSAAQAMEKVNECVKSQSSRINFCGNGNHIISLVQNAPYGLY 1155 Query 386 FFHVGYVPTNYTNVTAAYGLCNNNNPPLCIAPIDGYFITNQTTTYSVDTEWYYTGSSFYK 445 F H YVPT Y + GLC + IAP GYF+ +V+ W +TGS +Y Sbjct 1156 FIHFSYVPTKYVTAKVSPGLCIAGDRG--IAPKSGYFV-------NVNNTWMFTGSGYYY 1206 Query 446 PEPITQANSRYVSS---------DVKFDKLENNLPPPLLENSTDVDFKDE 486 PEPIT N +S+ DV + NLP DFK+E Sbjct 1207 PEPITGNNVVVMSTCAVNYTKAPDVMLNISTPNLP----------DFKEE 1246 >RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltName: Full=E2; AltName: Full=Peplomer protein; Contains: RecName: Full=Spike protein S1; Contains: RecName: Full=Spike protein S2; Contains: RecName: Full=Spike protein S2'; Flags: Precursor [Rat coronavirus (strain 681)] Sequence ID: Q9IKD1.1 Length: 1360 Range 1: 770 to 1238 Score:350 bits(899), Expect:2e-107, Method:Compositional matrix adjust., Identities:218/493(44%), Positives:295/493(59%), Gaps:44/493(8%) Query 14 YTSPIVVTPINSSG--FTAAIPTNFSFSVTQEYIETSIQKVTVDCKQYVCNGFTRCEKLL 71 +T IV + S G + IPTNF+ + QE+I+T KVT+DC +VC +T C + L Sbjct 770 FTVSIVNDSVESVGGLYEMQIPTNFTIASHQEFIQTRSPKVTIDCAAFVCGDYTACRQQL 829 Query 72 VEYGQFCSKINQALHGANLRQDESVYSLYSNI--KTTSTQTLEYGLNG---DFNLTLLQV 126 V+YG FC IN L N D + S + T + L G++G D N + Sbjct 830 VDYGSFCDNINAILGEVNNLIDTMQLQVASALIQGVTLSSRLADGISGQIDDINFS---- 885 Query 127 PQIG--GSSSSY-------RSAIEDLLFDKVTIADPGYMQGYDDCMKQGPQSARDLICAQ 177 P +G GS S RSAIED+LFDKV ++D G+++ Y++C G Q RDL+C Q Sbjct 886 PLLGCLGSDCSEGTKAAQGRSAIEDVLFDKVKLSDVGFVESYNNCT--GGQEVRDLLCVQ 943 Query 178 YVSGYKVLPPLYDPNMEAAYTSSLLGSIAGAGWTAGLSSFAAIPFAQSMFYRLNGVGITQ 237 +G KVLPP+ + + YT+ S W+A A +PFA S+ YR+NG+G+T Sbjct 944 SFNGIKVLPPVLSESQISGYTAGATASAMFPPWSAA----AGVPFALSVQYRINGLGVTM 999 Query 238 QVLSENQKLIANKFNQALGAMQTGFTTSNLAFSKVQDAVNANAQALSKLASELSNTFGAI 297 VLSENQK+IA+ FN A+GA+Q GF +N A +K+Q VNANA+AL+ L ++LSN FGAI Sbjct 1000 NVLSENQKMIASSFNNAIGAIQEGFDATNSALAKIQSVVNANAEALNNLLNQLSNRFGAI 1059 Query 298 SSSISDILARLDTVEQDAQIDRLINGRLISLNAFVSQQLVRSETAARSAQLASDKVNECV 357 S+S+ +IL+RLD +E AQIDRLINGRL +LNA+VS+QL SA A +KVNECV Sbjct 1060 SASLQEILSRLDALEAQAQIDRLINGRLTALNAYVSKQLSDMTLIKVSAAQAIEKVNECV 1119 Query 358 KSQSKRNGFCGSGTHIVSFVVNAPNGFYFFHVGYVPTNYTNVTAAYGLCNNNNPPLCIAP 417 KSQS R FCG+G HI+S V NAP G YF H YVPT++T V + GLC + + L AP Sbjct 1120 KSQSPRINFCGNGNHILSLVQNAPYGLYFIHFSYVPTSFTTVNVSPGLCISGDRGL--AP 1177 Query 418 IDGYFITNQTTTYSVDTEWYYTGSSFYKPEPITQANSRYVSS-DVKFDKLENNLPPPLLE 476 GYF+ + EW +TGS++Y PE IT NS +SS V + K P + Sbjct 1178 KAGYFVQDH-------GEWKFTGSNYYYPESITDKNSVVMSSCAVNYTK-----APEVFL 1225 Query 477 NSTDV---DFKDE 486 N++ DFK+E Sbjct 1226 NTSITNLPDFKEE 1238 >RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltName: Full=E2; AltName: Full=Peplomer protein; Contains: RecName: Full=Spike protein S1; Contains: RecName: Full=Spike protein S2; Contains: RecName: Full=Spike protein S2'; Flags: Precursor [Murine hepatitis virus strain A59] Sequence ID: P11224.2 Length: 1324 Range 1: 751 to 1210 Score:350 bits(897), Expect:3e-107, Method:Compositional matrix adjust., Identities:211/475(44%), Positives:286/475(60%), Gaps:35/475(7%) Query 32 IPTNFSFSVTQEYIETSIQKVTVDCKQYVCNGFTRCEKLLVEYGQFCSKINQALHGANLR 91 IPTNF+ +E+I+T KVT+DC +VC T C + LVEYG FC +N L+ N Sbjct 751 IPTNFTIGHHEEFIQTRSPKVTIDCAAFVCGDNTACRQQLVEYGSFCVNVNAILNEVNNL 810 Query 92 QDESVYSLYSNIK--TTSTQTLEYGLNG---DFNLTLL------QVPQIGGSSSSYR--S 138 D + S + T + L G++G D N + L + G S+ R S Sbjct 811 LDNMQLQVASALMQGVTISSRLPDGISGPIDDINFSPLLGCIGSTCAEDGNGPSAIRGRS 870 Query 139 AIEDLLFDKVTIADPGYMQGYDDCMKQGPQSARDLICAQYVSGYKVLPPLYDPNMEAAYT 198 AIEDLLFDKV ++D G+++ Y++C G Q RDL+C Q +G KVLPP+ + + YT Sbjct 871 AIEDLLFDKVKLSDVGFVEAYNNCT--GGQEVRDLLCVQSFNGIKVLPPVLSESQISGYT 928 Query 199 SSLLGSIAGAGWTAGLSSFAAIPFAQSMFYRLNGVGITQQVLSENQKLIANKFNQALGAM 258 + + W+A A +PF+ S+ YR+NG+G+T VLSENQK+IA+ FN ALGA+ Sbjct 929 TGATAAAMFPPWSAA----AGVPFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAI 984 Query 259 QTGFTTSNLAFSKVQDAVNANAQALSKLASELSNTFGAISSSISDILARLDTVEQDAQID 318 Q GF +N A K+Q VNANA+AL+ L ++LSN FGAIS+S+ +IL RL+ VE AQID Sbjct 985 QDGFDATNSALGKIQSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLEAVEAKAQID 1044 Query 319 RLINGRLISLNAFVSQQLVRSETAARSAQLASDKVNECVKSQSKRNGFCGSGTHIVSFVV 378 RLINGRL +LNA++S+QL S SA A +KVNECVKSQ+ R FCG+G HI+S V Sbjct 1045 RLINGRLTALNAYISKQLSDSTLIKVSAAQAIEKVNECVKSQTTRINFCGNGNHILSLVQ 1104 Query 379 NAPNGFYFFHVGYVPTNYTNVTAAYGLCNNNNPPLCIAPIDGYFITNQTTTYSVDTEWYY 438 NAP G YF H YVP ++T + GLC + + L AP GYF+ + D EW + Sbjct 1105 NAPYGLYFIHFSYVPISFTTANVSPGLCISGDRGL--APKAGYFVQD-------DGEWKF 1155 Query 439 TGSSFYKPEPITQANSRYVSS-DVKFDK-----LENNLP-PPLLENSTDVDFKDE 486 TGSS+Y PEPIT NS +SS V + K L ++P PP + D FK++ Sbjct 1156 TGSSYYYPEPITDKNSVIMSSCAVNYTKAPEVFLNTSIPNPPDFKEELDKWFKNQ 1210 >RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltName: Full=E2; AltName: Full=Peplomer protein; Contains: RecName: Full=Spike protein S1; Contains: RecName: Full=Spike protein S2; Contains: RecName: Full=Spike protein S2'; Flags: Precursor [Bovine coronavirus strain Quebec] Sequence ID: P25193.2 Length: 1363 Range 1: 802 to 1246 Score:350 bits(898), Expect:3e-107, Method:Compositional matrix adjust., Identities:208/465(45%), Positives:275/465(59%), Gaps:30/465(6%) Query 32 IPTNFSFSVTQEYIETSIQKVTVDCKQYVCNGFTRCEKLLVEYGQFCSKINQALHGANLR 91 IP+ F+ +E+I+TS KVT+DC +VC + C+ LVEYG FC IN L N Sbjct 802 IPSEFTIGNMEEFIQTSSPKVTIDCSAFVCGDYAACKSQLVEYGSFCDNINAILTEVNEL 861 Query 92 QDESVYSLYSNIKTTSTQTLEYGLNGDFNLTLLQV-PQIG--GSSS---SYRSAIEDLLF 145 D + + +++ T + + +FN+ + P +G GS+ S RSAIEDLLF Sbjct 862 LDTTQLQVANSLMNGVTLSTKLKDGVNFNVDDINFSPVLGCLGSACNKVSSRSAIEDLLF 921 Query 146 DKVTIADPGYMQGYDDCMKQGPQSARDLICAQYVSGYKVLPPLYDPNMEAAYTSSLLGSI 205 KV ++D G+++ Y++C G RDLIC Q +G KVLPPL N + YT + Sbjct 922 SKVKLSDVGFVEAYNNC--TGGAEIRDLICVQSYNGIKVLPPLLSVNQISGYTLA----A 975 Query 206 AGAGWTAGLSSFAAIPFAQSMFYRLNGVGITQQVLSENQKLIANKFNQALGAMQTGFTTS 265 A LS+ +PF ++ YR+NG+G+T VLS+NQKLIAN FN AL A+Q GF + Sbjct 976 TSASLFPPLSAAVGVPFYLNVQYRINGIGVTMDVLSQNQKLIANAFNNALDAIQEGFDAT 1035 Query 266 NLAFSKVQDAVNANAQALSKLASELSNTFGAISSSISDILARLDTVEQDAQIDRLINGRL 325 N A K+Q VNANA+AL+ L +LSN FGAISSS+ +IL+RLD +E AQIDRLINGRL Sbjct 1036 NSALVKIQAVVNANAEALNNLLQQLSNRFGAISSSLQEILSRLDALEAQAQIDRLINGRL 1095 Query 326 ISLNAFVSQQLVRSETAARSAQLASDKVNECVKSQSKRNGFCGSGTHIVSFVVNAPNGFY 385 +LN +VSQQL S SA A +KVNECVKSQS R FCG+G HI+S V NAP G Y Sbjct 1096 TALNVYVSQQLSDSTLVKFSAAQAMEKVNECVKSQSSRINFCGNGNHIISLVQNAPYGLY 1155 Query 386 FFHVGYVPTNYTNVTAAYGLCNNNNPPLCIAPIDGYFITNQTTTYSVDTEWYYTGSSFYK 445 F H YVPT Y + GLC + IAP GYF+ +V+ W +TGS +Y Sbjct 1156 FIHFSYVPTKYVTAKVSPGLCIAGDRG--IAPKSGYFV-------NVNNTWMFTGSGYYY 1206 Query 446 PEPITQANSRYVSS-DVKFDKLEN---NLPPPLLENSTDVDFKDE 486 PEPIT N +S+ V + K + N+ P L DFK+E Sbjct 1207 PEPITGNNVVVMSTCAVNYTKAPDVMLNISTPNLH-----DFKEE 1246 >RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltName: Full=E2; AltName: Full=Peplomer protein; Contains: RecName: Full=Spike protein S1; Contains: RecName: Full=Spike protein S2; Contains: RecName: Full=Spike protein S2'; Flags: Precursor [Bovine coronavirus Mebus] Sequence ID: P15777.1 Length: 1363 Range 1: 802 to 1246 Score:350 bits(897), Expect:4e-107, Method:Compositional matrix adjust., Identities:207/465(45%), Positives:273/465(58%), Gaps:30/465(6%) Query 32 IPTNFSFSVTQEYIETSIQKVTVDCKQYVCNGFTRCEKLLVEYGQFCSKINQALHGANLR 91 IP+ F+ +E+I+TS KVT+DC +VC + C+ LVEYG FC IN L N Sbjct 802 IPSEFTIGNMEEFIQTSSPKVTIDCSAFVCGDYAACKSQLVEYGSFCDNINAILTEVNEL 861 Query 92 QDESVYSLYSNIKTTSTQTLEYGLNGDFNLTLLQV-PQIGGSSS-----SYRSAIEDLLF 145 D + + +++ T + + +FN+ + P +G S S RSAIEDLLF Sbjct 862 LDTTQLQVANSLMNGVTLSTKLKDGVNFNVDDINFSPVLGCLGSDCNKVSSRSAIEDLLF 921 Query 146 DKVTIADPGYMQGYDDCMKQGPQSARDLICAQYVSGYKVLPPLYDPNMEAAYTSSLLGSI 205 KV ++D G+++ Y++C G RDLIC Q +G KVLPPL N + YT + Sbjct 922 SKVKLSDVGFVEAYNNC--TGGAEIRDLICVQSYNGIKVLPPLLSVNQISGYTLA----A 975 Query 206 AGAGWTAGLSSFAAIPFAQSMFYRLNGVGITQQVLSENQKLIANKFNQALGAMQTGFTTS 265 A LS+ +PF ++ YR+NG+G+T VLS+NQKLIAN FN AL A+Q GF + Sbjct 976 TSASLFPPLSAAVGVPFYLNVQYRINGIGVTMDVLSQNQKLIANAFNNALDAIQEGFDAT 1035 Query 266 NLAFSKVQDAVNANAQALSKLASELSNTFGAISSSISDILARLDTVEQDAQIDRLINGRL 325 N A K+Q VNANA+AL+ L +LSN FGAISSS+ +IL+RLD +E AQIDRLINGRL Sbjct 1036 NSALVKIQAVVNANAEALNNLLQQLSNRFGAISSSLQEILSRLDALEAQAQIDRLINGRL 1095 Query 326 ISLNAFVSQQLVRSETAARSAQLASDKVNECVKSQSKRNGFCGSGTHIVSFVVNAPNGFY 385 +LN +VSQQL S SA A +KVNECVKSQS R FCG+G HI+S V NAP G Y Sbjct 1096 TALNVYVSQQLSDSTLVKFSAAQAMEKVNECVKSQSSRINFCGNGNHIISLVQNAPYGLY 1155 Query 386 FFHVGYVPTNYTNVTAAYGLCNNNNPPLCIAPIDGYFITNQTTTYSVDTEWYYTGSSFYK 445 F H YVPT Y + GLC + IAP GYF+ +V+ W +TGS +Y Sbjct 1156 FIHFSYVPTKYVTAKVSPGLCIAGDRG--IAPKSGYFV-------NVNNTWMFTGSGYYY 1206 Query 446 PEPITQANSRYVSS-DVKFDKLEN---NLPPPLLENSTDVDFKDE 486 PEPIT N +S+ V + K + N+ P L DFK+E Sbjct 1207 PEPITGNNVVVMSTCAVNYTKAPDVMLNISTPNLH-----DFKEE 1246 >RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltName: Full=E2; AltName: Full=Peplomer protein; Contains: RecName: Full=Spike protein S1; Contains: RecName: Full=Spike protein S2; Contains: RecName: Full=Spike protein S2'; Flags: Precursor [Bovine coronavirus strain F15] Sequence ID: P25190.1 Length: 1363 Range 1: 802 to 1246 Score:349 bits(896), Expect:5e-107, Method:Compositional matrix adjust., Identities:206/470(44%), Positives:270/470(57%), Gaps:40/470(8%) Query 32 IPTNFSFSVTQEYIETSIQKVTVDCKQYVCNGFTRCEKLLVEYGQFCSKINQALHGANLR 91 IP+ F+ +E+I+TS KVT+DC +VC C+ LVEYG FC IN L N Sbjct 802 IPSEFTIGNMEEFIQTSSPKVTIDCSAFVCGDCAACKSQLVEYGSFCDNINAILTEVNEL 861 Query 92 QDESVYSLYSNIKTTSTQTLEYGLNGDFNLTLLQV-PQIGGSSS-----SYRSAIEDLLF 145 D + + +++ T + + +FN+ + P +G S S RSAIEDLLF Sbjct 862 LDTTQLQVANSLMNGVTLSTKLKDGVNFNVDDINFSPVLGCLGSECNKVSSRSAIEDLLF 921 Query 146 DKVTIADPGYMQGYDDCMKQGPQSARDLICAQYVSGYKVLPPLYDPNMEAAYTSSLLGSI 205 KV ++D G+++ Y++C G RDLIC Q +G KVLPPL N + YT + + Sbjct 922 SKVKLSDVGFVEAYNNC--TGGAEIRDLICVQSYNGIKVLPPLLSENQISGYTLAATSAS 979 Query 206 AGAGWTAGLSSFAAIPFAQSMFYRLNGVGITQQVLSENQKLIANKFNQALGAMQTGFTTS 265 W+A A +PF ++ YR+NG+G+T VLS+NQKLIAN FN AL A+Q GF + Sbjct 980 LFPPWSAA----AGVPFYLNVQYRINGIGVTMDVLSQNQKLIANAFNNALDAIQEGFDAT 1035 Query 266 NLAFSKVQDAVNANAQALSKLASELSNTFGAISSSISDILARLDTVEQDAQIDRLINGRL 325 N A K+Q VNANA+AL+ L +LSN FGAISSS+ +IL+RLD +E QIDRLINGR Sbjct 1036 NSALVKIQAVVNANAEALNNLLQQLSNRFGAISSSLQEILSRLDALEAQRQIDRLINGRF 1095 Query 326 ISLNAFVSQQLVRSETAARSAQLASDKVNECVKSQSKRNGFCGSGTHIVSFVVNAPNGFY 385 +LNA+VSQQL S SA A +KVNECVKSQS R FCG+G HI+S V NAP G Y Sbjct 1096 TALNAYVSQQLSDSTLVKFSAAQAMEKVNECVKSQSSRINFCGNGNHIISLVQNAPYGLY 1155 Query 386 FFHVGYVPTNYTNVTAAYGLCNNNNPPLCIAPIDGYFITNQTTTYSVDTEWYYTGSSFYK 445 F H YVPT Y + GLC + IAP GYF+ +V+ W +TGS +Y Sbjct 1156 FIHFSYVPTKYVTAKVSPGLCIAGDRG--IAPKSGYFV-------NVNNTWMFTGSGYYY 1206 Query 446 PEPITQANSRYVSS---------DVKFDKLENNLPPPLLENSTDVDFKDE 486 PEPIT N +S+ DV + NLP DFK+E Sbjct 1207 PEPITGNNVVVMSTCAVNYTKAPDVMLNISTPNLP----------DFKEE 1246 >RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltName: Full=E2; AltName: Full=Peplomer protein; Contains: RecName: Full=Spike protein S1; Contains: RecName: Full=Spike protein S2; Contains: RecName: Full=Spike protein S2'; Flags: Precursor [Human coronavirus HKU1 (isolate N5)] Sequence ID: Q0ZME7.1 Length: 1351 Range 1: 786 to 1225 Score:347 bits(890), Expect:4e-106, Method:Compositional matrix adjust., Identities:202/460(44%), Positives:275/460(59%), Gaps:36/460(7%) Query 28 FTAAIPTNFSFSVTQEYIETSIQKVTVDCKQYVCNGFTRCEKLLVEYGQFCSKINQALHG 87 F IPTNF+ + +E+I+TS KVT+DC +VC+ + C LL EYG FC IN L+ Sbjct 786 FEIQIPTNFTIAGHEEFIQTSSPKVTIDCSAFVCSNYAACHDLLSEYGTFCDNINSILNE 845 Query 88 ANLRQDESVY----------SLYSNIKTTSTQTLEYGLNGDFNLTLLQVPQIGGSSSSYR 137 N D + +L SN+ T ++ N DF L + GSSS R Sbjct 846 VNDLLDITQLQVANALMQGVTLSSNLNTNLHSDVD---NIDFKSLLGCLGSQCGSSS--R 900 Query 138 SAIEDLLFDKVTIADPGYMQGYDDCMKQGPQSARDLICAQYVSGYKVLPPLYDPNMEAAY 197 S +EDLLF+KV ++D G+++ Y++C G RDL+C Q +G KVLPP+ + Y Sbjct 901 SLLEDLLFNKVKLSDVGFVEAYNNC--TGGSEIRDLLCVQSFNGIKVLPPILSETQISGY 958 Query 198 TSSLLGSIAGAGWTAGLSSFAAIPFAQSMFYRLNGVGITQQVLSENQKLIANKFNQALGA 257 T++ + W+A A +PF+ ++ YR+NG+G+T VL++NQKLIAN FN+AL + Sbjct 959 TTAATVAAMFPPWSAA----AGVPFSLNVQYRINGLGVTMDVLNKNQKLIANAFNKALLS 1014 Query 258 MQTGFTTSNLAFSKVQDAVNANAQALSKLASELSNTFGAISSSISDILARLDTVEQDAQI 317 +Q GFT +N A +K+Q VNANAQAL+ L +L N FGAISSS+ +IL+RLD +E QI Sbjct 1015 IQNGFTATNSALAKIQSVVNANAQALNSLLQQLFNKFGAISSSLQEILSRLDNLEAQVQI 1074 Query 318 DRLINGRLISLNAFVSQQLVRSETAARSAQLASDKVNECVKSQSKRNGFCGSGTHIVSFV 377 DRLINGRL +LNA+VSQQL A A +KVNECVKSQS R FCG+G HI+S V Sbjct 1075 DRLINGRLTALNAYVSQQLSDITLIKAGASRAIEKVNECVKSQSPRINFCGNGNHILSLV 1134 Query 378 VNAPNGFYFFHVGYVPTNYTNVTAAYGLCNNNNPPLCIAPIDGYFITNQTTTYSVDTEWY 437 NAP G F H Y PT++ V + GLC + + IAP GYFI + W Sbjct 1135 QNAPYGLLFIHFSYKPTSFKTVLVSPGLCLSGDRG--IAPKQGYFIKQ-------NDSWM 1185 Query 438 YTGSSFYKPEPITQANSRYVSS-DVKFDK-----LENNLP 471 +TGSS+Y PEPI+ N +++S V F K L N++P Sbjct 1186 FTGSSYYYPEPISDKNVVFMNSCSVNFTKAPFIYLNNSIP 1225 >RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltName: Full=E2; AltName: Full=Peplomer protein; Contains: RecName: Full=Spike protein S1; Contains: RecName: Full=Spike protein S2; Contains: RecName: Full=Spike protein S2'; Flags: Precursor [Human coronavirus HKU1 (isolate N2)] Sequence ID: Q14EB0.1 Length: 1351 Range 1: 786 to 1225 Score:347 bits(889), Expect:4e-106, Method:Compositional matrix adjust., Identities:202/460(44%), Positives:275/460(59%), Gaps:36/460(7%) Query 28 FTAAIPTNFSFSVTQEYIETSIQKVTVDCKQYVCNGFTRCEKLLVEYGQFCSKINQALHG 87 F IPTNF+ + +E+I+TS KVT+DC +VC+ + C LL EYG FC IN L+ Sbjct 786 FEIQIPTNFTIAGHEEFIQTSSPKVTIDCSAFVCSNYAACHDLLSEYGTFCDNINSILNE 845 Query 88 ANLRQDESVY----------SLYSNIKTTSTQTLEYGLNGDFNLTLLQVPQIGGSSSSYR 137 N D + +L SN+ T ++ N DF L + GSSS R Sbjct 846 VNDLLDITQLQVANALMQGVTLSSNLNTNLHSDVD---NIDFKSLLGCLGSQCGSSS--R 900 Query 138 SAIEDLLFDKVTIADPGYMQGYDDCMKQGPQSARDLICAQYVSGYKVLPPLYDPNMEAAY 197 S +EDLLF+KV ++D G+++ Y++C G RDL+C Q +G KVLPP+ + Y Sbjct 901 SLLEDLLFNKVKLSDVGFVEAYNNC--TGGSEIRDLLCVQSFNGIKVLPPILSETQISGY 958 Query 198 TSSLLGSIAGAGWTAGLSSFAAIPFAQSMFYRLNGVGITQQVLSENQKLIANKFNQALGA 257 T++ + W+A A +PF+ ++ YR+NG+G+T VL++NQKLIAN FN+AL + Sbjct 959 TTAATVAAMFPPWSAA----AGVPFSLNVQYRINGLGVTMDVLNKNQKLIANAFNKALLS 1014 Query 258 MQTGFTTSNLAFSKVQDAVNANAQALSKLASELSNTFGAISSSISDILARLDTVEQDAQI 317 +Q GFT +N A +K+Q VNANAQAL+ L +L N FGAISSS+ +IL+RLD +E QI Sbjct 1015 IQNGFTATNSALAKIQSVVNANAQALNSLLQQLFNKFGAISSSLQEILSRLDNLEAQVQI 1074 Query 318 DRLINGRLISLNAFVSQQLVRSETAARSAQLASDKVNECVKSQSKRNGFCGSGTHIVSFV 377 DRLINGRL +LNA+VSQQL A A +KVNECVKSQS R FCG+G HI+S V Sbjct 1075 DRLINGRLTALNAYVSQQLSDITLIKAGASRAIEKVNECVKSQSPRINFCGNGNHILSLV 1134 Query 378 VNAPNGFYFFHVGYVPTNYTNVTAAYGLCNNNNPPLCIAPIDGYFITNQTTTYSVDTEWY 437 NAP G F H Y PT++ V + GLC + + IAP GYFI + W Sbjct 1135 QNAPYGLLFIHFSYKPTSFKTVLVSPGLCLSGDRG--IAPKQGYFIKQ-------NDSWM 1185 Query 438 YTGSSFYKPEPITQANSRYVSS-DVKFDK-----LENNLP 471 +TGSS+Y PEPI+ N +++S V F K L N++P Sbjct 1186 FTGSSYYYPEPISDKNVVFMNSCSVNFTKAPFIYLNNSIP 1225 >RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltName: Full=E2; AltName: Full=Peplomer protein; Contains: RecName: Full=Spike protein S1; Contains: RecName: Full=Spike protein S2; Contains: RecName: Full=Spike protein S2'; Flags: Precursor [Human coronavirus HKU1 (isolate N1)] Sequence ID: Q5MQD0.1 Length: 1356 Range 1: 790 to 1218 Score:340 bits(873), Expect:9e-104, Method:Compositional matrix adjust., Identities:189/444(43%), Positives:264/444(59%), Gaps:21/444(4%) Query 28 FTAAIPTNFSFSVTQEYIETSIQKVTVDCKQYVCNGFTRCEKLLVEYGQFCSKINQALHG 87 + IPTNF+ +E+I+T+ KVT+DC +VC+ + C LL EYG FC IN L Sbjct 790 YEIKIPTNFTIVGQEEFIQTNSPKVTIDCSLFVCSNYAACHDLLSEYGTFCDNINSILDE 849 Query 88 ANLRQDESVYSLYSNIKTTSTQTLEYGLNGDFNLTLLQVPQIGGS-----SSSYRSAIED 142 N D + + + T + N F++ + + G SS RS ED Sbjct 850 VNGLLDTTQLHVADTLMQGVTLSSNLNTNLHFDVDNINFKSLVGCLGPHCGSSSRSFFED 909 Query 143 LLFDKVTIADPGYMQGYDDCMKQGPQSARDLICAQYVSGYKVLPPLYDPNMEAAYTSSLL 202 LLFDKV ++D G+++ Y++C G RDL+C Q +G KVLPP+ + + YT++ Sbjct 910 LLFDKVKLSDVGFVEAYNNC--TGGSEIRDLLCVQSFNGIKVLPPILSESQISGYTTAAT 967 Query 203 GSIAGAGWTAGLSSFAAIPFAQSMFYRLNGVGITQQVLSENQKLIANKFNQALGAMQTGF 262 + W+A A IPF+ ++ YR+NG+G+T VL++NQKLIA FN AL ++Q GF Sbjct 968 VAAMFPPWSAA----AGIPFSLNVQYRINGLGVTMDVLNKNQKLIATAFNNALLSIQNGF 1023 Query 263 TTSNLAFSKVQDAVNANAQALSKLASELSNTFGAISSSISDILARLDTVEQDAQIDRLIN 322 + +N A +K+Q VN+NAQAL+ L +L N FGAISSS+ +IL+RLD +E QIDRLIN Sbjct 1024 SATNSALAKIQSVVNSNAQALNSLLQQLFNKFGAISSSLQEILSRLDALEAQVQIDRLIN 1083 Query 323 GRLISLNAFVSQQLVRSETAARSAQLASDKVNECVKSQSKRNGFCGSGTHIVSFVVNAPN 382 GRL +LNA+VSQQL A LA +KVNECVKSQS R FCG+G HI+S V NAP Sbjct 1084 GRLTALNAYVSQQLSDISLVKFGAALAMEKVNECVKSQSPRINFCGNGNHILSLVQNAPY 1143 Query 383 GFYFFHVGYVPTNYTNVTAAYGLCNNNNPPLCIAPIDGYFITNQTTTYSVDTEWYYTGSS 442 G F H Y P ++ V + GLC + + + IAP GYFI + + W +TGSS Sbjct 1144 GLLFMHFSYKPISFKTVLVSPGLCISGD--VGIAPKQGYFIKH-------NDHWMFTGSS 1194 Query 443 FYKPEPITQANSRYVSS-DVKFDK 465 +Y PEPI+ N ++++ V F K Sbjct 1195 YYYPEPISDKNVVFMNTCSVNFTK 1218 >RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltName: Full=E2; AltName: Full=Peplomer protein; Contains: RecName: Full=Spike protein S1; Contains: RecName: Full=Spike protein S2; Contains: RecName: Full=Spike protein S2'; Flags: Precursor [Murine hepatitis virus strain JHM] Sequence ID: P11225.1 Length: 1235 Range 1: 658 to 1113 Score:333 bits(855), Expect:9e-102, Method:Compositional matrix adjust., Identities:207/475(44%), Positives:280/475(58%), Gaps:35/475(7%) Query 28 FTAAIPTNFSFSVTQEYIETSIQKVTVDCKQYVCNGFTRCEKLLVEYGQFCSKINQALHG 87 + IPTNF+ +E+I+ KVT+DC +VC C + LVEYG FC +N L+ Sbjct 658 YEMQIPTNFTIGHHEEFIQIRAPKVTIDCAAFVCGDNAACRQQLVEYGSFCDNVNAILNE 717 Query 88 ANLRQDESVYSLYSNIK--TTSTQTLEYGLNG---DFNLTLL------QVPQIGGSSSSY 136 N D + S + T + L G++G D N + L + G S+ Sbjct 718 VNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFSPLLGCIGSTCAEDGNGPSAI 777 Query 137 R--SAIEDLLFDKVTIADPGYMQGYDDCMKQGPQSARDLICAQYVSGYKVLPPLYDPNME 194 R SAIEDLLFDKV ++D G+++ Y++C G Q RDL+C Q +G KVLPP+ + Sbjct 778 RGRSAIEDLLFDKVKLSDVGFVEAYNNCT--GGQEVRDLLCVQSFNGIKVLPPVLSESQI 835 Query 195 AAYTSSLLGSIAGAGWTAGLSSFAAIPFAQSMFYRLNGVGITQQVLSENQKLIANKFNQA 254 + YT+ + WTA A +PF+ ++ YR+NG+G+T VLSENQK+IA+ FN A Sbjct 836 SGYTAGATAAAMFPPWTAA----AGVPFSLNVQYRINGLGVTMNVLSENQKMIASAFNNA 891 Query 255 LGAMQTGFTTSNLAFSKVQDAVNANAQALSKLASELSNTFGAISSSISDILARLDTVEQD 314 LGA+Q GF +N A K+Q VNANA+AL+ L ++LSN FGAIS+S+ +IL RLD VE Sbjct 892 LGAIQEGFDATNSALGKIQSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLDAVEAK 951 Query 315 AQIDRLINGRLISLNAFVSQQLVRSETAARSAQLASDKVNECVKSQSKRNGFCGSGTHIV 374 AQIDRLINGRL +LNA++S+QL S SA A +KVNECVKSQ+ R FCG+G HI+ Sbjct 952 AQIDRLINGRLTALNAYISKQLSDSTLIKFSAAQAIEKVNECVKSQTTRINFCGNGNHIL 1011 Query 375 SFVVNAPNGFYFFHVGYVPTNYTNVTAAYGLCNNNNPPLCIAPIDGYFITNQTTTYSVDT 434 S V NAP G F H YVPT++ + GLC + + L AP GYF+ + + Sbjct 1012 SLVQNAPYGLCFIHFSYVPTSFKTANVSPGLCISGDRGL--APKAGYFVQD-------NG 1062 Query 435 EWYYTGSSFYKPEPITQANS-RYVSSDVKFDKLENNLPPPLLENSTD--VDFKDE 486 EW +TGS++Y PEPIT NS +S V + K P L NS DFK+E Sbjct 1063 EWKFTGSNYYYPEPITDKNSVAMISCAVNYTK----APEVFLNNSIPNLPDFKEE 1113 >RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltName: Full=E2; AltName: Full=Peplomer protein; Contains: RecName: Full=Spike protein S1; Contains: RecName: Full=Spike protein S2; Contains: RecName: Full=Spike protein S2'; Flags: Precursor [Murine hepatitis virus strain JHMV / variant CL-2] Sequence ID: Q02385.1 Length: 1376 Range 1: 799 to 1254 Score:333 bits(853), Expect:6e-101, Method:Compositional matrix adjust., Identities:207/475(44%), Positives:280/475(58%), Gaps:35/475(7%) Query 28 FTAAIPTNFSFSVTQEYIETSIQKVTVDCKQYVCNGFTRCEKLLVEYGQFCSKINQALHG 87 + IPTNF+ +E+I+ KVT+DC +VC C + LVEYG FC +N L+ Sbjct 799 YEMQIPTNFTIGHHEEFIQIRAPKVTIDCAAFVCGDNAACRQQLVEYGSFCDNVNAILNE 858 Query 88 ANLRQDESVYSLYSNIK--TTSTQTLEYGLNG---DFNLTLL------QVPQIGGSSSSY 136 N D + S + T + L G++G D N + L + G S+ Sbjct 859 VNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFSPLLGCIGSTCAEDGNGPSAM 918 Query 137 R--SAIEDLLFDKVTIADPGYMQGYDDCMKQGPQSARDLICAQYVSGYKVLPPLYDPNME 194 R SAIEDLLFDKV ++D G+++ Y++C G Q RDL+C Q +G KVLPP+ + Sbjct 919 RGRSAIEDLLFDKVKLSDVGFVEAYNNCT--GGQEVRDLLCVQSFNGIKVLPPVLSESQI 976 Query 195 AAYTSSLLGSIAGAGWTAGLSSFAAIPFAQSMFYRLNGVGITQQVLSENQKLIANKFNQA 254 + YT+ + WTA A +PF+ ++ YR+NG+G+T VLSENQK+IA+ FN A Sbjct 977 SGYTAGATAAAMFPPWTAA----AGVPFSLNVQYRINGLGVTMNVLSENQKMIASAFNNA 1032 Query 255 LGAMQTGFTTSNLAFSKVQDAVNANAQALSKLASELSNTFGAISSSISDILARLDTVEQD 314 LGA+Q GF +N A K+Q VNANA+AL+ L ++LSN FGAIS+S+ +IL RLD VE Sbjct 1033 LGAIQEGFDATNSALGKIQSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLDRVEAK 1092 Query 315 AQIDRLINGRLISLNAFVSQQLVRSETAARSAQLASDKVNECVKSQSKRNGFCGSGTHIV 374 AQIDRLINGRL +LNA++S+QL S SA A +KVNECVKSQ+ R FCG+G HI+ Sbjct 1093 AQIDRLINGRLTALNAYISKQLSDSTLIKFSAAQAIEKVNECVKSQTTRINFCGNGNHIL 1152 Query 375 SFVVNAPNGFYFFHVGYVPTNYTNVTAAYGLCNNNNPPLCIAPIDGYFITNQTTTYSVDT 434 S V NAP G F H YVPT++ + GLC + + L AP GYF+ + + Sbjct 1153 SLVQNAPYGLCFIHFSYVPTSFKTANVSPGLCISGDRGL--APKAGYFVQD-------NG 1203 Query 435 EWYYTGSSFYKPEPITQANS-RYVSSDVKFDKLENNLPPPLLENSTD--VDFKDE 486 EW +TGS++Y PEPIT NS +S V + K P L NS DFK+E Sbjct 1204 EWKFTGSNYYYPEPITDKNSVVMISCAVNYTK----APEVFLNNSIPNLPDFKEE 1254 >RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltName: Full=E2; AltName: Full=Peplomer protein; Contains: RecName: Full=Spike protein S1; Contains: RecName: Full=Spike protein S2; Contains: RecName: Full=Spike protein S2'; Flags: Precursor [Murine hepatitis virus strain 4] Sequence ID: P22432.1 Length: 1376 Range 1: 799 to 1254 Score:333 bits(853), Expect:6e-101, Method:Compositional matrix adjust., Identities:207/475(44%), Positives:280/475(58%), Gaps:35/475(7%) Query 28 FTAAIPTNFSFSVTQEYIETSIQKVTVDCKQYVCNGFTRCEKLLVEYGQFCSKINQALHG 87 + IPTNF+ +E+I+ KVT+DC +VC C + LVEYG FC +N L+ Sbjct 799 YEMQIPTNFTIGHHEEFIQIRAPKVTIDCAAFVCGDNAACRQQLVEYGSFCDNVNAILNE 858 Query 88 ANLRQDESVYSLYSNIK--TTSTQTLEYGLNG---DFNLTLL------QVPQIGGSSSSY 136 N D + S + T + L G++G D N + L + G S+ Sbjct 859 VNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFSPLLGCIGSTCAEDGNGPSAI 918 Query 137 R--SAIEDLLFDKVTIADPGYMQGYDDCMKQGPQSARDLICAQYVSGYKVLPPLYDPNME 194 R SAIEDLLFDKV ++D G+++ Y++C G Q RDL+C Q +G KVLPP+ + Sbjct 919 RGRSAIEDLLFDKVKLSDVGFVEAYNNCT--GGQEVRDLLCVQSFNGIKVLPPVLSESQI 976 Query 195 AAYTSSLLGSIAGAGWTAGLSSFAAIPFAQSMFYRLNGVGITQQVLSENQKLIANKFNQA 254 + YT+ + WTA A +PF+ ++ YR+NG+G+T VLSENQK+IA+ FN A Sbjct 977 SGYTAGATAAAMFPPWTAA----AGVPFSLNVQYRINGLGVTMNVLSENQKMIASAFNNA 1032 Query 255 LGAMQTGFTTSNLAFSKVQDAVNANAQALSKLASELSNTFGAISSSISDILARLDTVEQD 314 LGA+Q GF +N A K+Q VNANA+AL+ L ++LSN FGAIS+S+ +IL RLD VE Sbjct 1033 LGAIQEGFDATNSALGKIQSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLDAVEAK 1092 Query 315 AQIDRLINGRLISLNAFVSQQLVRSETAARSAQLASDKVNECVKSQSKRNGFCGSGTHIV 374 AQIDRLINGRL +LNA++S+QL S SA A +KVNECVKSQ+ R FCG+G HI+ Sbjct 1093 AQIDRLINGRLTALNAYISKQLSDSTLIKFSAAQAIEKVNECVKSQTTRINFCGNGNHIL 1152 Query 375 SFVVNAPNGFYFFHVGYVPTNYTNVTAAYGLCNNNNPPLCIAPIDGYFITNQTTTYSVDT 434 S V NAP G F H YVPT++ + GLC + + L AP GYF+ + + Sbjct 1153 SLVQNAPYGLCFIHFSYVPTSFKTANVSPGLCISGDRGL--APKAGYFVQD-------NG 1203 Query 435 EWYYTGSSFYKPEPITQANS-RYVSSDVKFDKLENNLPPPLLENSTD--VDFKDE 486 EW +TGS++Y PEPIT NS +S V + K P L NS DFK+E Sbjct 1204 EWKFTGSNYYYPEPITDKNSVVMISCAVNYTK----APEVFLNNSIPNLPDFKEE 1254 >RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltName: Full=E2; AltName: Full=Peplomer protein; Flags: Precursor [Canine coronavirus BGF10] Sequence ID: Q7T6T3.1 Length: 1453 Range 1: 831 to 1285 Score:303 bits(777), Expect:3e-90, Method:Compositional matrix adjust., Identities:199/467(43%), Positives:255/467(54%), Gaps:45/467(9%) Query 20 VTPINSSGFTAAIPTNFSFSVTQEYIETSIQKVTVDCKQYVCNGFTRCEKLLVEYGQFCS 79 V PI++ T IPTNF+ SV EYI+ V++DC +YVCNG +RC KLL +Y C Sbjct 831 VQPISTGNVT--IPTNFTISVQVEYIQVYTTPVSIDCSRYVCNGNSRCNKLLTQYVSACH 888 Query 80 KINQAL-HGANLRQDESVYSLYSNIKTTSTQTLEYGLNGDFNLTLL--QVPQIGGS---- 132 I QAL GA L E L+ + ++E N NL + + P IGGS Sbjct 889 TIEQALAMGARLENMEIDSMLFVSENALKLASVE-AFNSTDNLDPIYREWPNIGGSWLGG 947 Query 133 ----------SSSYRSAIEDLLFDKVTIADPGYM-QGYDDCMKQGPQSARDLICAQYVSG 181 YRSAIEDLLFDKV + G + + Y C G DL+CAQY +G Sbjct 948 LKDILPSHNSKRKYRSAIEDLLFDKVVTSGLGTVDEDYKRC--TGGYDIADLVCAQYYNG 1005 Query 182 YKVLPPLYDPNMEAAYTSSLLGSIAGAGWTAGLSSFAAIPFAQSMFYRLNGVGITQQVLS 241 VLP + + + A YT+SL G I G S IPFA ++ RLN V + VL+ Sbjct 1006 IMVLPGVANDDKMAMYTASLAGGITLGALGGGAVS---IPFAVAVQARLNYVALQTDVLN 1062 Query 242 ENQKLIANKFNQALGAM------------QT--GFTTSNLAFSKVQDAVNANAQALSKLA 287 +NQ+++AN FNQA+G + QT G T A +KVQD VN QALS L Sbjct 1063 KNQQILANAFNQAIGNITQAFGNVNDAIHQTSKGLATVAKALAKVQDVVNTQGQALSHLT 1122 Query 288 SELSNTFGAISSSISDILARLDTVEQDAQIDRLINGRLISLNAFVSQQLVRSETAARSAQ 347 +L N F AISSSISDI RLD + DAQ+DRLI GRL +LNAFVSQ L R S Q Sbjct 1123 VQLQNNFQAISSSISDIYNRLDELSADAQVDRLITGRLTALNAFVSQTLTRQAEVRASRQ 1182 Query 348 LASDKVNECVKSQSKRNGFCGSGTHIVSFVVNAPNGFYFFHVGYVPTNYTNVTAAYGLC- 406 LA DKVNECV+SQS+R GFCG+GTH+ S APNG FFH +PT Y VTA G+C Sbjct 1183 LAKDKVNECVRSQSQRFGFCGNGTHLFSLANAAPNGMIFFHTVLLPTAYETVTAWSGICA 1242 Query 407 NNNNPPLCIAPIDGYFITNQTTTYSVDTEWYYTGSSFYKPEPITQAN 453 ++ N + D T ++D ++Y T + Y+P T ++ Sbjct 1243 SDGNRTFGLVVKD----VQLTLFRNLDYKFYLTPRTMYQPRVATSSD 1285 >RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltName: Full=E2; AltName: Full=Peplomer protein; Flags: Precursor [Canine enteric coronavirus INSAVC-1] Sequence ID: P36300.1 Length: 1451 Range 1: 829 to 1283 Score:299 bits(766), Expect:1e-88, Method:Compositional matrix adjust., Identities:195/468(42%), Positives:251/468(53%), Gaps:47/468(10%) Query 20 VTPINSSGFTAAIPTNFSFSVTQEYIETSIQKVTVDCKQYVCNGFTRCEKLLVEYGQFCS 79 V PI++ T IPTNF+ SV EYI+ V++DC +YVCNG RC KLL +Y C Sbjct 829 VQPISTGNVT--IPTNFTISVQVEYIQVYTTPVSIDCARYVCNGNPRCNKLLTQYVSACQ 886 Query 80 KINQAL-HGANLRQDESVYSLYSNIKTTSTQTLEYGLNGDFNLTLL--QVPQIGGS---- 132 I QAL GA L E L+ + ++E N NL + + P IGGS Sbjct 887 TIEQALAMGARLENMEIDSMLFVSENALKLASVE-AFNSTENLDPIYKEWPNIGGSWLGG 945 Query 133 ----------SSSYRSAIEDLLFDKVTIADPGYMQGYDDCMKQGPQSARDLICAQYVSGY 182 YRSAIEDLLFDKV + G + D G DL+CA+Y +G Sbjct 946 LKDILPSHNSKRKYRSAIEDLLFDKVVTSGLGTVDE-DYKRSAGGYDIADLVCARYYNGI 1004 Query 183 KVLPPLYDPNMEAAYTSSLLGSIAGAGWTAGLSSFAAIPFAQSMFYRLNGVGITQQVLSE 242 VLP + + + YT+SL G I + G AIPFA ++ RLN V + VL++ Sbjct 1005 MVLPGVANDDKMTMYTASLTGGITLGALSGGA---VAIPFAVAVQARLNYVALQTDVLNK 1061 Query 243 NQKLIANKFNQALGAM------------QT--GFTTSNLAFSKVQDAVNANAQALSKLAS 288 NQ+++AN FNQA+G + QT G T A +KVQD VN QALS L Sbjct 1062 NQQILANAFNQAIGNITQAFGKVNDAIHQTSKGLATVAKALAKVQDVVNTQGQALSHLTV 1121 Query 289 ELSNTFGAISSSISDILARLDTVEQDAQIDRLINGRLISLNAFVSQQLVRSETAARSAQL 348 +L N F AISSSISDI RLD + DAQ+DRLI GRL +LNAFVSQ L R S QL Sbjct 1122 QLQNNFQAISSSISDIYNRLDELSADAQVDRLITGRLTALNAFVSQTLTRQAEVRASRQL 1181 Query 349 ASDKVNECVKSQSKRNGFCGSGTHIVSFVVNAPNGFYFFHVGYVPTNYTNVTAAYGLCNN 408 A DKVNECV+SQS+R GFCG+GTH+ S APNG FFH +PT Y VTA G+C + Sbjct 1182 AKDKVNECVRSQSQRFGFCGNGTHLFSLANAAPNGMIFFHTVLLPTAYETVTAWSGICAS 1241 Query 409 NNPP---LCIAPIDGYFITNQTTTYSVDTEWYYTGSSFYKPEPITQAN 453 + L + + N +D ++Y T + Y+P T ++ Sbjct 1242 DGSRTFGLVVEDVQLTLFRN------LDEKFYLTPRTMYQPRVATSSD 1283 >RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltName: Full=E2; AltName: Full=Peplomer protein; Flags: Precursor [Porcine respiratory coronavirus (STRAIN RM4)] Sequence ID: P24413.1 Length: 1225 Range 1: 603 to 1087 Score:297 bits(760), Expect:2e-88, Method:Compositional matrix adjust., Identities:199/497(40%), Positives:265/497(53%), Gaps:46/497(9%) Query 20 VTPINSSGFTAAIPTNFSFSVTQEYIETSIQKVTVDCKQYVCNGFTRCEKLLVEYGQFCS 79 V PI++ T IPTNF+ SV EYI+ V++DC +YVCNG RC KLL +Y C Sbjct 603 VQPISTGNVT--IPTNFTISVQVEYIQVYTTPVSIDCSRYVCNGNPRCNKLLTQYVSACQ 660 Query 80 KINQAL-HGANLRQDESVYSLYSNIKTTSTQTLE-YGLNGDFNLTLLQVPQIGG------ 131 I QAL GA L E L+ + ++E + + + + P IGG Sbjct 661 TIEQALAMGARLENMEVDSMLFVSENALKLASVEAFNSSETLDPIYKEWPNIGGFWLEGL 720 Query 132 --------SSSSYRSAIEDLLFDKVTIADPGYM-QGYDDCMKQGPQSARDLICAQYVSGY 182 S YRSAIEDLLF KV + G + + Y C G DL+CAQY +G Sbjct 721 KYILPSDNSKRKYRSAIEDLLFSKVVTSGLGTVDEDYKRC--TGGYDIADLVCAQYYNGI 778 Query 183 KVLPPLYDPNMEAAYTSSLLGSIAGAGWTAGLSSFAAIPFAQSMFYRLNGVGITQQVLSE 242 VLP + + + YT+SL G I G AIPFA ++ RLN V + VL++ Sbjct 779 MVLPGVANADKMTMYTASLAGGITLGALGGGA---VAIPFAVAVQARLNYVALQTDVLNK 835 Query 243 NQKLIANKFNQALGAM------------QT--GFTTSNLAFSKVQDAVNANAQALSKLAS 288 NQ+++A+ FNQA+G + QT G TT A +KVQD VN QAL L Sbjct 836 NQQILASAFNQAIGNITQSFGKVNDAIHQTSRGLTTVAKALAKVQDVVNTQGQALRHLTV 895 Query 289 ELSNTFGAISSSISDILARLDTVEQDAQIDRLINGRLISLNAFVSQQLVRSETAARSAQL 348 +L N F AISSSISDI RLD + DAQ+DRLI GRL +LNAFVSQ L R S QL Sbjct 896 QLQNNFQAISSSISDIYNRLDELSADAQVDRLITGRLTALNAFVSQTLTRQAEVRASRQL 955 Query 349 ASDKVNECVKSQSKRNGFCGSGTHIVSFVVNAPNGFYFFHVGYVPTNYTNVTAAYGLCNN 408 A DKVNECV+SQS+R GFCG+GTH+ S APNG FFH +PT Y VTA G+C Sbjct 956 AKDKVNECVRSQSQRFGFCGNGTHLFSLANAAPNGMIFFHTVLLPTAYETVTAWSGIC-- 1013 Query 409 NNPPLCIAPIDGYFITN-QTTTY-SVDTEWYYTGSSFYKPEPITQANSRYVSS-DVKFDK 465 L + G + + Q T + ++D ++Y T + Y+P T ++ + DV F Sbjct 1014 ---ALDVDRTFGLVVKDVQLTLFRNLDDKFYLTPRTMYQPRVATSSDFVQIEGCDVLFVN 1070 Query 466 LENNLPPPLLENSTDVD 482 + P ++ + D++ Sbjct 1071 TTVSDLPSIIPDYIDIN 1087 >RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltName: Full=E2; AltName: Full=Peplomer protein; Contains: RecName: Full=Spike protein S1; Contains: RecName: Full=Spike protein S2; Contains: RecName: Full=Spike protein S2'; Flags: Precursor [Avian infectious bronchitis virus (strain D274)] Sequence ID: P12722.1 Length: 1154 Range 1: 575 to 1000 Score:295 bits(756), Expect:3e-88, Method:Compositional matrix adjust., Identities:170/438(39%), Positives:243/438(55%), Gaps:16/438(3%) Query 20 VTPINSSGFTAAIPTNFSFSVTQEYIETSIQKVTVDCKQYVCNGFTRCEKLLVEYGQFCS 79 V P+ + IP +F+ +VT EYI+T + KV ++C QYVC C KL +YG C Sbjct 575 VAPLLNVTENVLIPDSFNLTVTDEYIQTRMDKVQINCLQYVCGNSLECRKLFQQYGPVCD 634 Query 80 KINQALHGANLRQDESVYSLYSNIKTT--STQTLEYGLNGDFNLTLLQVPQIGGSSSSYR 137 I ++ ++D + YS+ K + +T L G+FN++LL P SS+S R Sbjct 635 NILSVVNSVGQKEDMELLHFYSSTKPSGFNTPVLSNVSTGEFNISLLLTPP---SSASGR 691 Query 138 SAIEDLLFDKVTIADPGYMQGYDDCMKQGPQSARDLICAQYVSGYKVLPPLYDPNMEAAY 197 S IEDLLF V Y C +DL CA+ +G VLPP+ M+ Y Sbjct 692 SFIEDLLFTSVESVGLPTDDAYKKCTAGPLGFLKDLACAREYNGLLVLPPIITAEMQTLY 751 Query 198 TSSLLGSIAGAGWTAGLSSFAAIPFAQSMFYRLNGVGITQQVLSENQKLIANKFNQALGA 257 TSSL+ S+A G++S AIPFA + R+N +GITQ +L +NQ+ IA FN+A+G Sbjct 752 TSSLVASMA----FGGITSVGAIPFATQLQARINHLGITQSLLLKNQEKIAASFNKAIGH 807 Query 258 MQTGFTTSNLAFSKVQDAVNANAQALSKLASELSNTFGAISSSISDILARLDTVEQDAQI 317 MQ GF +++LA ++QD VN + L++ + L+ FGAISS + DI +LD+++ DAQ+ Sbjct 808 MQEGFRSTSLALQQIQDVVNKQSSILTETMASLNKNFGAISSVLQDIYQQLDSIQADAQV 867 Query 318 DRLINGRLISLNAFVSQQLVRSETAARSAQLASDKVNECVKSQSKRNGFCGSGTHIVSFV 377 DR+I GRL SL+ S + ++ +LA+ K+NECVKSQS R FCG+G H+++ Sbjct 868 DRIITGRLSSLSVLASAKQAEYYRVSQQRELATQKINECVKSQSIRYSFCGNGRHVLTIP 927 Query 378 VNAPNGFYFFHVGYVPTNYTNVTAAYGLCNN--NNPPLCIAPIDGYFITNQTTTYSVDTE 435 NAPNG F H Y P ++ NVTA G C N N I P +G I Q V+ Sbjct 928 QNAPNGIVFIHFTYTPESFVNVTAIVGFCVNPANASQYAIVPANGRGIFIQ-----VNGS 982 Query 436 WYYTGSSFYKPEPITQAN 453 +Y T Y P IT + Sbjct 983 YYITARDMYMPRDITAGD 1000 >RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltName: Full=E2; AltName: Full=Peplomer protein; Flags: Precursor [Canine enteric coronavirus K378] Sequence ID: Q65984.1 Length: 1453 Range 1: 831 to 1278 Score:297 bits(761), Expect:5e-88, Method:Compositional matrix adjust., Identities:193/461(42%), Positives:248/461(53%), Gaps:47/461(10%) Query 20 VTPINSSGFTAAIPTNFSFSVTQEYIETSIQKVTVDCKQYVCNGFTRCEKLLVEYGQFCS 79 V PI++ T IPTNF+ SV EYI+ V++DC +YVCNG RC KLL +Y C Sbjct 831 VQPISTGNVT--IPTNFTISVQVEYIQVYTTPVSIDCSRYVCNGNPRCNKLLTQYVSACQ 888 Query 80 KINQAL-HGANLRQDESVYSLYSNIKTTSTQTLE-YGLNGDFNLTLLQVPQIGGS----- 132 I QAL GA L E L+ + ++E + + + P IGGS Sbjct 889 TIEQALAMGARLENMEIDSMLFVSENALKLASVEAFNSTETLDPIYKEWPNIGGSWLGGL 948 Query 133 ---------SSSYRSAIEDLLFDKVTIADPGYM-QGYDDCMKQGPQSARDLICAQYVSGY 182 YRSAIEDLLFDKV + G + + Y C G DL+CAQY +G Sbjct 949 KDILPSHNSKRKYRSAIEDLLFDKVVTSGLGTVDEDYKRC--TGGYDIADLVCAQYYNGI 1006 Query 183 KVLPPLYDPNMEAAYTSSLLGSIAGAGWTAGLSSFAAIPFAQSMFYRLNGVGITQQVLSE 242 VLP + + + A YT+SL G I G S IPFA ++ RLN V + VL++ Sbjct 1007 MVLPGVANDDKMAMYTASLAGGITLGSLGGGAVS---IPFAIAVQARLNYVALQTDVLNK 1063 Query 243 NQKLIANKFNQALGAMQTGF---------TTSNLA-----FSKVQDAVNANAQALSKLAS 288 NQ+++AN FNQA+G + F T+ LA +KVQD VN QALS L Sbjct 1064 NQQILANAFNQAIGNITQAFGKVNDAIHQTSQGLATVAKVLAKVQDVVNTQGQALSHLTL 1123 Query 289 ELSNTFGAISSSISDILARLDTVEQDAQIDRLINGRLISLNAFVSQQLVRSETAARSAQL 348 +L N F AISSSISDI RLD + DAQ+DRLI GRL +LNAFVSQ L R S QL Sbjct 1124 QLQNNFQAISSSISDIYNRLDELSADAQVDRLITGRLTALNAFVSQTLTRQAEVRASRQL 1183 Query 349 ASDKVNECVKSQSKRNGFCGSGTHIVSFVVNAPNGFYFFHVGYVPTNYTNVTAAYGLCNN 408 A DKVNECV+SQS+R GFCG+GTH+ S APNG FFH +PT Y VTA G+C + Sbjct 1184 AKDKVNECVRSQSQRFGFCGNGTHLFSLANAAPNGMIFFHTVLLPTAYETVTAWSGICAS 1243 Query 409 NNPP---LCIAPIDGYFITNQTTTYSVDTEWYYTGSSFYKP 446 + L + + N +D ++Y T + Y+P Sbjct 1244 DGDRTFGLVVKDVQLTLFRN------LDDKFYLTPRTMYQP 1278 >RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltName: Full=E2; AltName: Full=Peplomer protein; Flags: Precursor [Feline infectious peritonitis virus (strain 79-1146)] Sequence ID: P10033.1 Length: 1452 Range 1: 830 to 1284 Score:297 bits(760), Expect:6e-88, Method:Compositional matrix adjust., Identities:195/469(42%), Positives:251/469(53%), Gaps:49/469(10%) Query 20 VTPINSSGFTAAIPTNFSFSVTQEYIETSIQKVTVDCKQYVCNGFTRCEKLLVEYGQFCS 79 V PI++ T IPTNF+ SV EY++ V++DC +YVCNG RC KLL +Y C Sbjct 830 VQPISTGNVT--IPTNFTISVQVEYMQVYTTPVSIDCARYVCNGNPRCNKLLTQYVSACQ 887 Query 80 KINQAL-HGANLRQDESVYSLYSNIKTTSTQTLEYGLNGDFNLTLL--QVPQIGGS---- 132 I QAL GA L E L+ + ++E N NL + + P IGGS Sbjct 888 TIEQALAMGARLENMEVDSMLFVSENALKLASVE-AFNSTENLDPIYKEWPSIGGSWLGG 946 Query 133 ----------SSSYRSAIEDLLFDKVTIADPGYM-QGYDDCMKQGPQSARDLICAQYVSG 181 Y SAIEDLLFDKV + G + + Y C G DL+CAQY +G Sbjct 947 LKDILPSHNSKRKYGSAIEDLLFDKVVTSGLGTVDEDYKRC--TGGYDIADLVCAQYYNG 1004 Query 182 YKVLPPLYDPNMEAAYTSSLLGSIAGAGWTAGLSSFAAIPFAQSMFYRLNGVGITQQVLS 241 VLP + + + YT+SL G I G AIPFA ++ RLN V + VL+ Sbjct 1005 IMVLPGVANADKMTMYTASLAGGITLGALGGGA---VAIPFAVAVQARLNYVALQTDVLN 1061 Query 242 ENQKLIANKFNQALGAM------------QT--GFTTSNLAFSKVQDAVNANAQALSKLA 287 +NQ+++AN FNQA+G + QT G T A +KVQD VN QALS L Sbjct 1062 KNQQILANAFNQAIGNITQAFGKVNDAIHQTSQGLATVAKALAKVQDVVNTQGQALSHLT 1121 Query 288 SELSNTFGAISSSISDILARLDTVEQDAQIDRLINGRLISLNAFVSQQLVRSETAARSAQ 347 +L N F AISSSISDI RLD + DAQ+DRLI GRL +LNAFVSQ L R S Q Sbjct 1122 VQLQNNFQAISSSISDIYNRLDELSADAQVDRLITGRLTALNAFVSQTLTRQAEVRASRQ 1181 Query 348 LASDKVNECVKSQSKRNGFCGSGTHIVSFVVNAPNGFYFFHVGYVPTNYTNVTAAYGLCN 407 LA DKVNECV+SQS+R GFCG+GTH+ S APNG FFH +PT Y VTA G+C Sbjct 1182 LAKDKVNECVRSQSQRFGFCGNGTHLFSLANAAPNGMIFFHTVLLPTAYETVTAWSGICA 1241 Query 408 NNNPP---LCIAPIDGYFITNQTTTYSVDTEWYYTGSSFYKPEPITQAN 453 ++ L + + N +D ++Y T + Y+P T ++ Sbjct 1242 SDGDRTFGLVVKDVQLTLFRN------LDDKFYLTPRTMYQPRVATSSD 1284 >RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltName: Full=E2; AltName: Full=Peplomer protein; Flags: Precursor [Porcine respiratory coronavirus (strain 86/137004 / British isolate)] Sequence ID: P27655.1 Length: 1225 Range 1: 603 to 1087 Score:295 bits(756), Expect:6e-88, Method:Compositional matrix adjust., Identities:200/499(40%), Positives:259/499(51%), Gaps:50/499(10%) Query 20 VTPINSSGFTAAIPTNFSFSVTQEYIETSIQKVTVDCKQYVCNGFTRCEKLLVEYGQFCS 79 V PI++ T IPTNF+ SV EYI+ V++DC +YVCNG RC KLL +Y C Sbjct 603 VQPISTGNVT--IPTNFTISVQVEYIQVYTTPVSIDCSRYVCNGNPRCNKLLTQYVSACQ 660 Query 80 KINQAL-HGANLRQDESVYSLYSNIKTTSTQTLEYGLNGDFNLTLL--QVPQIGG----- 131 I QAL GA L E L+ + ++E N L + + P IGG Sbjct 661 TIEQALAMGARLENMEVDSMLFVSENALKLASVE-AFNSSETLDPIYKEWPNIGGFWLEG 719 Query 132 ---------SSSSYRSAIEDLLFDKVTIADPGYM-QGYDDCMKQGPQSARDLICAQYVSG 181 S YRSAIEDLLF KV + G + + Y C G DL+CAQY +G Sbjct 720 LKYILPSDNSKRKYRSAIEDLLFSKVVTSGLGTVDEDYKRC--TGGYDIADLVCAQYYNG 777 Query 182 YKVLPPLYDPNMEAAYTSSLLGSIAGAGWTAGLSSFAAIPFAQSMFYRLNGVGITQQVLS 241 VLP + + + YT+SL G I G AIPFA ++ RLN V + VL+ Sbjct 778 IMVLPGVANADKMTMYTASLAGGITLGALGGGA---VAIPFAVAVQARLNYVALQTDVLN 834 Query 242 ENQKLIANKFNQALGAM------------QT--GFTTSNLAFSKVQDAVNANAQALSKLA 287 +NQ+++A+ FNQA+G + QT G TT A +KVQD VN QAL L Sbjct 835 KNQQILASAFNQAIGNITQSFGKVNDAIHQTSRGLTTVAKALAKVQDVVNTQGQALRHLT 894 Query 288 SELSNTFGAISSSISDILARLDTVEQDAQIDRLINGRLISLNAFVSQQLVRSETAARSAQ 347 +L N F AISSSISDI RLD + DAQ+DRLI GRL +LNAFVSQ L R S Q Sbjct 895 VQLQNNFQAISSSISDIYNRLDELSADAQVDRLITGRLTALNAFVSQTLTRQAEVRASRQ 954 Query 348 LASDKVNECVKSQSKRNGFCGSGTHIVSFVVNAPNGFYFFHVGYVPTNYTNVTAAYGLC- 406 LA DKVNECVKSQS R GFCG+GTH+ S APNG FFH +PT Y VTA G+C Sbjct 955 LAKDKVNECVKSQSHRFGFCGNGTHLFSLANAAPNGMIFFHTVLLPTAYETVTAWSGICA 1014 Query 407 --NNNNPPLCIAPIDGYFITNQTTTYSVDTEWYYTGSSFYKPEPITQANSRYVSS-DVKF 463 + L + + N +D +Y T + Y+P T ++ + DV F Sbjct 1015 LDGDRTFGLVVKDVQLTLFRN------LDDNFYLTPRTMYQPRVATSSDFVQIEGCDVLF 1068 Query 464 DKLENNLPPPLLENSTDVD 482 + P ++ + D++ Sbjct 1069 VNTTVSDLPSIIPDYIDIN 1087 >RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltName: Full=E2; AltName: Full=Peplomer protein; Flags: Precursor [Porcine transmissible gastroenteritis coronavirus strain Purdue] Sequence ID: P07946.2 Length: 1447 Range 1: 825 to 1309 Score:297 bits(760), Expect:7e-88, Method:Compositional matrix adjust., Identities:200/499(40%), Positives:263/499(52%), Gaps:50/499(10%) Query 20 VTPINSSGFTAAIPTNFSFSVTQEYIETSIQKVTVDCKQYVCNGFTRCEKLLVEYGQFCS 79 V PI++ T IPTNF+ SV EYI+ V++DC +YVCNG RC KLL +Y C Sbjct 825 VQPISTGNVT--IPTNFTISVQVEYIQVYTTPVSIDCSRYVCNGNPRCNKLLTQYVSACQ 882 Query 80 KINQAL-HGANLRQDESVYSLYSNIKTTSTQTLEYGLNGDFNLTLL--QVPQIGGS---- 132 I QAL GA L E L+ + ++E N L + + P IGGS Sbjct 883 TIEQALAMGARLENMEVDSMLFVSENALKLASVE-AFNSSETLDPIYKEWPNIGGSWLEG 941 Query 133 ----------SSSYRSAIEDLLFDKVTIADPGYM-QGYDDCMKQGPQSARDLICAQYVSG 181 YRSAIEDLLFDKV + G + + Y C G DL+CAQY +G Sbjct 942 LKYILPSHNSKRKYRSAIEDLLFDKVVTSGLGTVDEDYKRC--TGGYDIADLVCAQYYNG 999 Query 182 YKVLPPLYDPNMEAAYTSSLLGSIAGAGWTAGLSSFAAIPFAQSMFYRLNGVGITQQVLS 241 VLP + + + YT+SL G I G AIPFA ++ RLN V + VL+ Sbjct 1000 IMVLPGVANADKMTMYTASLAGGITLGALGGGA---VAIPFAVAVQARLNYVALQTDVLN 1056 Query 242 ENQKLIANKFNQALGAM------------QT--GFTTSNLAFSKVQDAVNANAQALSKLA 287 +NQ+++A+ FNQA+G + QT G T A +KVQD VN QALS L Sbjct 1057 KNQQILASAFNQAIGNITQSFGKVNDAIHQTSRGLATVAKALAKVQDVVNIQGQALSHLT 1116 Query 288 SELSNTFGAISSSISDILARLDTVEQDAQIDRLINGRLISLNAFVSQQLVRSETAARSAQ 347 +L N F AISSSISDI RLD + DAQ+DRLI GRL +LNAFVSQ L R S Q Sbjct 1117 VQLQNNFQAISSSISDIYNRLDELSADAQVDRLITGRLTALNAFVSQTLTRQAEVRASRQ 1176 Query 348 LASDKVNECVKSQSKRNGFCGSGTHIVSFVVNAPNGFYFFHVGYVPTNYTNVTAAYGLCN 407 LA DKVNECV+SQS+R GFCG+GTH+ S APNG FFH +PT Y VTA G+C Sbjct 1177 LAKDKVNECVRSQSQRFGFCGNGTHLFSLANAAPNGMIFFHTVLLPTAYETVTAWPGICA 1236 Query 408 NNNPP---LCIAPIDGYFITNQTTTYSVDTEWYYTGSSFYKPEPITQANSRYVSS-DVKF 463 ++ L + + N +D ++Y T + Y+P T ++ + DV F Sbjct 1237 SDGDRTFGLVVKDVQLTLFRN------LDDKFYLTPRTMYQPRVATSSDFVQIEGCDVLF 1290 Query 464 DKLENNLPPPLLENSTDVD 482 + P ++ + D++ Sbjct 1291 VNATVSDLPSIIPDYIDIN 1309 >RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltName: Full=E2; AltName: Full=Peplomer protein; Contains: RecName: Full=Spike protein S1; Contains: RecName: Full=Spike protein S2; Contains: RecName: Full=Spike protein S2'; Flags: Precursor [Avian infectious bronchitis virus (strain 6/82)] Sequence ID: P05135.1 Length: 1163 Range 1: 575 to 1000 Score:294 bits(752), Expect:1e-87, Method:Compositional matrix adjust., Identities:170/438(39%), Positives:243/438(55%), Gaps:16/438(3%) Query 20 VTPINSSGFTAAIPTNFSFSVTQEYIETSIQKVTVDCKQYVCNGFTRCEKLLVEYGQFCS 79 V P+ + IP +F+ +VT EYI+T + KV ++C QYVC C KL +YG C Sbjct 575 VAPLLNVTENVLIPDSFNLTVTDEYIQTRMDKVQINCLQYVCGNSLECRKLFQQYGPVCD 634 Query 80 KINQALHGANLRQDESVYSLYSNIKTT--STQTLEYGLNGDFNLTLLQVPQIGGSSSSYR 137 I ++ ++D + YS+ K + +T L G+FN++LL P SS+S R Sbjct 635 NILSVVNSVGQKEDMELLYFYSSTKPSGFNTPVLSNVSTGEFNISLLLTPP---SSASGR 691 Query 138 SAIEDLLFDKVTIADPGYMQGYDDCMKQGPQSARDLICAQYVSGYKVLPPLYDPNMEAAY 197 S IEDLLF V Y C +DL CA+ +G VLPP+ M+ Y Sbjct 692 SFIEDLLFTSVESVGLPTDDAYKKCTAGPLGFLKDLACAREYNGLLVLPPIITAEMQTLY 751 Query 198 TSSLLGSIAGAGWTAGLSSFAAIPFAQSMFYRLNGVGITQQVLSENQKLIANKFNQALGA 257 TSSL+ S+A G++S AIPFA + R+N +GITQ +L +NQ+ IA FN+A+G Sbjct 752 TSSLVASMA----FGGITSAGAIPFATQLQARINHLGITQSLLFKNQEKIAASFNKAIGH 807 Query 258 MQTGFTTSNLAFSKVQDAVNANAQALSKLASELSNTFGAISSSISDILARLDTVEQDAQI 317 MQ GF +++LA ++QD VN + L++ + L+ FGAISS + DI +LD+++ DAQ+ Sbjct 808 MQEGFRSTSLALQQIQDVVNKQSSILTETMASLNKNFGAISSVLQDIYQQLDSIQADAQV 867 Query 318 DRLINGRLISLNAFVSQQLVRSETAARSAQLASDKVNECVKSQSKRNGFCGSGTHIVSFV 377 DR+I GRL SL+ S + ++ +LA+ K+NECVKSQS R FCG+G H+++ Sbjct 868 DRIITGRLSSLSVLASAKQAEYYRVSQQRELATQKINECVKSQSIRYSFCGNGRHVLTIP 927 Query 378 VNAPNGFYFFHVGYVPTNYTNVTAAYGLCNN--NNPPLCIAPIDGYFITNQTTTYSVDTE 435 NAPNG F H Y P ++ NVTA G C N N I P +G I Q V+ Sbjct 928 QNAPNGIVFIHFTYTPESFVNVTAIVGFCVNPANASQYAIVPANGRGIFIQ-----VNGS 982 Query 436 WYYTGSSFYKPEPITQAN 453 +Y T Y P IT + Sbjct 983 YYITARDMYMPRDITAGD 1000 >RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltName: Full=E2; AltName: Full=Peplomer protein; Flags: Precursor [Porcine transmissible gastroenteritis coronavirus strain Miller] Sequence ID: P33470.2 Length: 1449 Range 1: 827 to 1281 Score:294 bits(753), Expect:6e-87, Method:Compositional matrix adjust., Identities:192/468(41%), Positives:249/468(53%), Gaps:47/468(10%) Query 20 VTPINSSGFTAAIPTNFSFSVTQEYIETSIQKVTVDCKQYVCNGFTRCEKLLVEYGQFCS 79 V PI++ T IPTNF+ SV EYI+ V++DC +YVCNG RC KLL +Y C Sbjct 827 VQPISTGNVT--IPTNFTISVQVEYIQVYTTPVSIDCSRYVCNGNPRCNKLLTQYVSACQ 884 Query 80 KINQAL-HGANLRQDESVYSLYSNIKTTSTQTLE-YGLNGDFNLTLLQVPQIGGS----- 132 I QAL GA L E L+ + ++E + + + + P IGGS Sbjct 885 TIEQALAMGARLENMEVGSMLFVSENALKLASVEAFNSSETLDPIYKEWPNIGGSWLEGL 944 Query 133 ---------SSSYRSAIEDLLFDKVTIADPGYM-QGYDDCMKQGPQSARDLICAQYVSGY 182 YRSAIEDLLF KV + G + + Y C G DL+CAQY +G Sbjct 945 KYILPSDNSKRKYRSAIEDLLFAKVVTSGLGTVDEDYKRC--TGGYDIADLVCAQYYNGI 1002 Query 183 KVLPPLYDPNMEAAYTSSLLGSIAGAGWTAGLSSFAAIPFAQSMFYRLNGVGITQQVLSE 242 VLP + + + YT+SL G I G AIPFA ++ RLN V + VL++ Sbjct 1003 MVLPGVANADKMTMYTASLAGGITLGALGGGA---VAIPFAVAVQARLNYVALQTDVLNK 1059 Query 243 NQKLIANKFNQALGAM------------QT--GFTTSNLAFSKVQDAVNANAQALSKLAS 288 NQ+++A+ FNQA+G + QT G T A +KVQD VN QALS L Sbjct 1060 NQQILASAFNQAIGNITQSFGKVNDAIHQTSRGLATVAKALAKVQDVVNTQGQALSHLTV 1119 Query 289 ELSNTFGAISSSISDILARLDTVEQDAQIDRLINGRLISLNAFVSQQLVRSETAARSAQL 348 +L N F AISSSISDI RLD + DAQ+DRLI GRL +LNAFVSQ L R S QL Sbjct 1120 QLQNNFQAISSSISDIYNRLDELSADAQVDRLITGRLTALNAFVSQTLTRQAEVRASRQL 1179 Query 349 ASDKVNECVKSQSKRNGFCGSGTHIVSFVVNAPNGFYFFHVGYVPTNYTNVTAAYGLC-- 406 A DKVNECV+SQS+R GFCG+GTH+ S APNG FFH +PT Y VTA G+C Sbjct 1180 AKDKVNECVRSQSQRFGFCGNGTHLFSLANAAPNGMIFFHTVLLPTAYETVTAWAGICAL 1239 Query 407 -NNNNPPLCIAPIDGYFITNQTTTYSVDTEWYYTGSSFYKPEPITQAN 453 + L + + N +D ++Y T + Y+P T ++ Sbjct 1240 DGDRTFGLVVKDVQLTLFRN------LDDKFYLTPRTMYQPRVATSSD 1281 >RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltName: Full=E2; AltName: Full=Peplomer protein; Flags: Precursor [Porcine transmissible gastroenteritis coronavirus strain Neb72-RT] Sequence ID: Q01977.1 Length: 1447 Range 1: 825 to 1309 Score:294 bits(752), Expect:7e-87, Method:Compositional matrix adjust., Identities:195/498(39%), Positives:260/498(52%), Gaps:48/498(9%) Query 20 VTPINSSGFTAAIPTNFSFSVTQEYIETSIQKVTVDCKQYVCNGFTRCEKLLVEYGQFCS 79 V PI++ T IPTNF+ SV EYI+ V++DC +YVCNG RC KLL +Y C Sbjct 825 VQPISTGNVT--IPTNFTISVQVEYIQVYTTPVSIDCSRYVCNGNPRCNKLLTQYVSACQ 882 Query 80 KINQAL-HGANLRQDESVYSLYSNIKTTSTQTLE-YGLNGDFNLTLLQVPQIGGS----- 132 I QAL GA L E L+ + ++E + + + + P IGGS Sbjct 883 TIEQALAMGARLENMEVDSMLFVSENALKLASVEAFNSSETLDPIYKEWPNIGGSWLEGL 942 Query 133 ---------SSSYRSAIEDLLFDKVTIADPGYM-QGYDDCMKQGPQSARDLICAQYVSGY 182 YRSAIEDLLFDKV + G + + Y C G DL+CAQY +G Sbjct 943 KYILPSHNSKRKYRSAIEDLLFDKVVTSGLGTVDEDYKRC--TGGYDIADLVCAQYYNGI 1000 Query 183 KVLPPLYDPNMEAAYTSSLLGSIAGAGWTAGLSSFAAIPFAQSMFYRLNGVGITQQVLSE 242 VLP + + + YT+SL G I G AIPFA ++ RLN V + VL++ Sbjct 1001 MVLPGVANADKMTMYTASLAGGITLGALGGGA---VAIPFAVAVQARLNYVALQTDVLNK 1057 Query 243 NQKLIANKFNQALGAM--------------QTGFTTSNLAFSKVQDAVNANAQALSKLAS 288 NQ+++A+ FNQA+G + G T A +KVQD V QALS L Sbjct 1058 NQQILASAFNQAIGNITQSFGKVNDAIHXTSRGLATVAKALAKVQDVVXIQGQALSHLTV 1117 Query 289 ELSNTFGAISSSISDILARLDTVEQDAQIDRLINGRLISLNAFVSQQLVRSETAARSAQL 348 +L N F AISSSISDI RLD + DAQ+DRLI GRL +LNAFVSQ L R S QL Sbjct 1118 QLQNNFQAISSSISDIYNRLDELSADAQVDRLITGRLTALNAFVSQTLTRQAEVRASRQL 1177 Query 349 ASDKVNECVKSQSKRNGFCGSGTHIVSFVVNAPNGFYFFHVGYVPTNYTNVTAAYGLCNN 408 A DKVNECV+SQS+R GFCG+GTH+ S APNG FFH +PT Y VTA G+C + Sbjct 1178 AKDKVNECVRSQSQRFGFCGNGTHLFSLANAAPNGMIFFHTVLLPTAYETVTAWPGICAS 1237 Query 409 NNPP---LCIAPIDGYFITNQTTTYSVDTEWYYTGSSFYKPEPITQANSRYVSS-DVKFD 464 + L + + N +D ++Y T + Y+P T ++ + DV F Sbjct 1238 DGDRTFGLVVKDVQLTLFRN------LDDKFYLTPRTMYQPRVATSSDFVQIEGCDVLFV 1291 Query 465 KLENNLPPPLLENSTDVD 482 + P ++ + D++ Sbjct 1292 NATVSDLPSIIPDYIDIN 1309 >RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltName: Full=E2; AltName: Full=Peplomer protein; Flags: Precursor [Porcine transmissible gastroenteritis coronavirus strain FS772/70] Sequence ID: P18450.2 Length: 1449 Range 1: 827 to 1281 Score:293 bits(749), Expect:2e-86, Method:Compositional matrix adjust., Identities:193/469(41%), Positives:248/469(52%), Gaps:49/469(10%) Query 20 VTPINSSGFTAAIPTNFSFSVTQEYIETSIQKVTVDCKQYVCNGFTRCEKLLVEYGQFCS 79 V PI++ T IPTNF+ SV EYI+ V++DC +YVCNG RC KLL +Y C Sbjct 827 VQPISTGNVT--IPTNFTISVQVEYIQVYTTPVSIDCSRYVCNGNPRCNKLLTQYVSACQ 884 Query 80 KINQALH-GANLRQDESVYSLYSNIKTTSTQTLEYGLNGDFNLTLL--QVPQIGGS---- 132 I QAL GA L E L+ + ++E N L + + P IGGS Sbjct 885 TIEQALAVGARLENMEVDSMLFVSENALKLASVE-AFNSSETLDPIYKEWPNIGGSWLEG 943 Query 133 ----------SSSYRSAIEDLLFDKVTIADPGYM-QGYDDCMKQGPQSARDLICAQYVSG 181 YRSAIEDLLF KV + G + + Y C G DL+CAQY +G Sbjct 944 LKYILPSDNSKRKYRSAIEDLLFSKVVTSGLGTVDEDYKRC--TGGYDIADLVCAQYYNG 1001 Query 182 YKVLPPLYDPNMEAAYTSSLLGSIAGAGWTAGLSSFAAIPFAQSMFYRLNGVGITQQVLS 241 VLP + + + YT+SL G I G AIPFA ++ RLN V + VL+ Sbjct 1002 IMVLPGVANADKMTMYTASLAGGITLGALGGGA---VAIPFAVAVQARLNYVALQTDVLN 1058 Query 242 ENQKLIANKFNQALGAM------------QT--GFTTSNLAFSKVQDAVNANAQALSKLA 287 +NQ+++A+ FNQA+G + QT G T A +KVQD VN QALS L Sbjct 1059 KNQQILASAFNQAIGNITQSFGKVNDAIHQTSRGLATVAKALAKVQDVVNTQGQALSHLT 1118 Query 288 SELSNTFGAISSSISDILARLDTVEQDAQIDRLINGRLISLNAFVSQQLVRSETAARSAQ 347 +L N F AISSSISDI RLD + DA +DRLI GRL +LNAFVSQ L R S Q Sbjct 1119 VQLQNNFQAISSSISDIYNRLDELSADAHVDRLITGRLTALNAFVSQTLTRQAEVRASRQ 1178 Query 348 LASDKVNECVKSQSKRNGFCGSGTHIVSFVVNAPNGFYFFHVGYVPTNYTNVTAAYGLC- 406 LA DKVNECV+SQS+R GFCG+GTH+ S APNG FFH +PT Y VTA G+C Sbjct 1179 LAKDKVNECVRSQSQRFGFCGNGTHLFSLANAAPNGMIFFHAVLLPTAYETVTAWAGICA 1238 Query 407 --NNNNPPLCIAPIDGYFITNQTTTYSVDTEWYYTGSSFYKPEPITQAN 453 + L + + N +D ++Y T + Y+P T ++ Sbjct 1239 LDGDRTFGLVVKDVQLTLFRN------LDDKFYLTPRTMYQPRVATSSD 1281 >RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltName: Full=E2; AltName: Full=Peplomer protein; Contains: RecName: Full=Spike protein S1; Contains: RecName: Full=Spike protein S2; Contains: RecName: Full=Spike protein S2'; Flags: Precursor [Avian infectious bronchitis virus (strain KB8523)] Sequence ID: P12650.1 Length: 1162 Range 1: 574 to 999 Score:288 bits(738), Expect:1e-85, Method:Compositional matrix adjust., Identities:167/439(38%), Positives:241/439(54%), Gaps:18/439(4%) Query 20 VTPINSSGFTAAIPTNFSFSVTQEYIETSIQKVTVDCKQYVCNGFTRCEKLLVEYGQFCS 79 V P+ + IP +F+ +VT EYI+T + KV ++C QY+C C L +YG C Sbjct 574 VAPLLNVTENVLIPNSFNLTVTDEYIQTRMDKVQINCLQYICGNSLECRNLFQQYGPVCD 633 Query 80 KINQALHGANLRQDESVYSLYSNIKTT--STQTLEYGLNGDFNLTL-LQVPQIGGSSSSY 136 + ++ ++D + + YS+ K +T L G+FN++L L P SS Sbjct 634 NMLSVVNSVGQKEDMELLNFYSSTKPAGFNTPVLSNVSTGEFNISLFLTTP----SSPRR 689 Query 137 RSAIEDLLFDKVTIADPGYMQGYDDCMKQGPQSARDLICAQYVSGYKVLPPLYDPNMEAA 196 RS IEDLLF V Y +C +DL+CA+ +G VLPP+ M+ Sbjct 690 RSFIEDLLFTSVESVGLPTDDAYKNCTAGPLGFLKDLVCAREYNGLLVLPPIITAEMQTL 749 Query 197 YTSSLLGSIAGAGWTAGLSSFAAIPFAQSMFYRLNGVGITQQVLSENQKLIANKFNQALG 256 YTSSL+ S+A G TA AIPFA + R+N +GITQ +L +NQ+ IA FN+A+G Sbjct 750 YTSSLVASMAFGGITAA----GAIPFATQLQARINHLGITQSLLLKNQEKIAASFNKAIG 805 Query 257 AMQTGFTTSNLAFSKVQDAVNANAQALSKLASELSNTFGAISSSISDILARLDTVEQDAQ 316 MQ GF +++LA ++QD VN + L++ + L+ FGAISS I +I +LD ++ +AQ Sbjct 806 HMQEGFRSTSLALQQIQDVVNKQSAILTETMASLNKNFGAISSVIQEIYLQLDAIQANAQ 865 Query 317 IDRLINGRLISLNAFVSQQLVRSETAARSAQLASDKVNECVKSQSKRNGFCGSGTHIVSF 376 +DRLI GRL SL+ S + ++ +LA+ K+NECVKSQS R FCG+G H+++ Sbjct 866 VDRLITGRLSSLSVLASAKQAEYIRVSQQRELATQKINECVKSQSTRYSFCGNGRHVLTI 925 Query 377 VVNAPNGFYFFHVGYVPTNYTNVTAAYGLC--NNNNPPLCIAPIDGYFITNQTTTYSVDT 434 NAPNG F H Y P ++ NVTA G C NN I P++G I Q V+ Sbjct 926 PQNAPNGIVFIHFTYTPESFVNVTAIVGFCVKPNNASQYAIVPVNGRGIFIQ-----VND 980 Query 435 EWYYTGSSFYKPEPITQAN 453 +Y T Y P IT + Sbjct 981 SYYITARDMYMPRHITAGD 999 >RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltName: Full=E2; AltName: Full=Peplomer protein; Contains: RecName: Full=Spike protein S1; Contains: RecName: Full=Spike protein S2; Contains: RecName: Full=Spike protein S2'; Flags: Precursor [Avian infectious bronchitis virus (strain Beaudette)] Sequence ID: P11223.1 Length: 1162 Range 1: 574 to 999 Score:284 bits(726), Expect:5e-84, Method:Compositional matrix adjust., Identities:167/438(38%), Positives:238/438(54%), Gaps:16/438(3%) Query 20 VTPINSSGFTAAIPTNFSFSVTQEYIETSIQKVTVDCKQYVCNGFTRCEKLLVEYGQFCS 79 V P+ + IP +F+ +VT EYI+T + KV ++C QYVC C KL +YG C Sbjct 574 VAPLFNVTENVLIPNSFNLTVTDEYIQTRMDKVQINCLQYVCGSSLDCRKLFQQYGPVCD 633 Query 80 KINQALHGANLRQDESVYSLYSNIKTT--STQTLEYGLNGDFNLTLLQVPQIGGSSSSYR 137 I ++ ++D + + YS+ K +T L G+FN++LL SS R Sbjct 634 NILSVVNSVGQKEDMELLNFYSSTKPAGFNTPVLSNVSTGEFNISLLLT---NPSSRRKR 690 Query 138 SAIEDLLFDKVTIADPGYMQGYDDCMKQGPQSARDLICAQYVSGYKVLPPLYDPNMEAAY 197 S IEDLLF V Y +C +DL CA+ +G VLPP+ M+A Y Sbjct 691 SLIEDLLFTSVESVGLPTNDAYKNCTAGPLGFFKDLACAREYNGLLVLPPIITAEMQALY 750 Query 198 TSSLLGSIAGAGWTAGLSSFAAIPFAQSMFYRLNGVGITQQVLSENQKLIANKFNQALGA 257 TSSL+ S+A G TA AIPFA + R+N +GITQ +L +NQ+ IA FN+A+G Sbjct 751 TSSLVASMAFGGITAA----GAIPFATQLQARINHLGITQSLLLKNQEKIAASFNKAIGH 806 Query 258 MQTGFTTSNLAFSKVQDAVNANAQALSKLASELSNTFGAISSSISDILARLDTVEQDAQI 317 MQ GF +++LA ++QD V+ + L++ + L+ FGAISS I +I + D ++ +AQ+ Sbjct 807 MQEGFRSTSLALQQIQDVVSKQSAILTETMASLNKNFGAISSVIQEIYQQFDAIQANAQV 866 Query 318 DRLINGRLISLNAFVSQQLVRSETAARSAQLASDKVNECVKSQSKRNGFCGSGTHIVSFV 377 DRLI GRL SL+ S + ++ +LA+ K+NECVKSQS R FCG+G H+++ Sbjct 867 DRLITGRLSSLSVLASAKQAEYIRVSQQRELATQKINECVKSQSIRYSFCGNGRHVLTIP 926 Query 378 VNAPNGFYFFHVGYVPTNYTNVTAAYGLCNN--NNPPLCIAPIDGYFITNQTTTYSVDTE 435 NAPNG F H Y P ++ NVTA G C N I P +G I Q V+ Sbjct 927 QNAPNGIVFIHFSYTPDSFVNVTAIVGFCVKPANASQYAIVPANGRGIFIQ-----VNGS 981 Query 436 WYYTGSSFYKPEPITQAN 453 +Y T Y P IT + Sbjct 982 YYITARDMYMPRAITAGD 999 >RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltName: Full=E2; AltName: Full=Peplomer protein; Contains: RecName: Full=Spike protein S1; Contains: RecName: Full=Spike protein S2; Contains: RecName: Full=Spike protein S2'; Flags: Precursor [Avian infectious bronchitis virus (strain M41)] Sequence ID: P12651.1 Length: 1162 Range 1: 574 to 999 Score:283 bits(724), Expect:1e-83, Method:Compositional matrix adjust., Identities:167/438(38%), Positives:236/438(53%), Gaps:16/438(3%) Query 20 VTPINSSGFTAAIPTNFSFSVTQEYIETSIQKVTVDCKQYVCNGFTRCEKLLVEYGQFCS 79 V P+ + IP +F+ +VT EYI+T + KV ++C QYVC C L +YG C Sbjct 574 VAPLLNVTENVLIPNSFNLTVTDEYIQTRMDKVQINCLQYVCGNSLDCRDLFQQYGPVCD 633 Query 80 KINQALHGANLRQDESVYSLYSNIKTTSTQT--LEYGLNGDFNLTLLQVPQIGGSSSSYR 137 I ++ ++D + + YS+ K T L G+FN++LL SS R Sbjct 634 NILSVVNSIGQKEDMELLNFYSSTKPAGFNTPFLSNVSTGEFNISLLLTTP---SSPRRR 690 Query 138 SAIEDLLFDKVTIADPGYMQGYDDCMKQGPQSARDLICAQYVSGYKVLPPLYDPNMEAAY 197 S IEDLLF V Y +C +DL CA+ +G VLPP+ M+ Y Sbjct 691 SFIEDLLFTSVESVGLPTDDAYKNCTAGPLGFLKDLACAREYNGLLVLPPIITAEMQTLY 750 Query 198 TSSLLGSIAGAGWTAGLSSFAAIPFAQSMFYRLNGVGITQQVLSENQKLIANKFNQALGA 257 TSSL+ S+A G TA AIPFA + R+N +GITQ +L +NQ+ IA FN+A+G Sbjct 751 TSSLVASMAFGGITAA----GAIPFATQLQARINHLGITQSLLLKNQEKIAASFNKAIGR 806 Query 258 MQTGFTTSNLAFSKVQDAVNANAQALSKLASELSNTFGAISSSISDILARLDTVEQDAQI 317 MQ GF +++LA ++QD VN + L++ + L+ FGAISS I +I +LD ++ +AQ+ Sbjct 807 MQEGFRSTSLALQQIQDVVNKQSAILTETMASLNKNFGAISSVIQEIYQQLDAIQANAQV 866 Query 318 DRLINGRLISLNAFVSQQLVRSETAARSAQLASDKVNECVKSQSKRNGFCGSGTHIVSFV 377 DRLI GRL SL+ S + ++ +LA+ K+NECVKSQS R FCG+G H+++ Sbjct 867 DRLITGRLSSLSVLASAKQAEHIRVSQQRELATQKINECVKSQSIRYSFCGNGRHVLTIP 926 Query 378 VNAPNGFYFFHVGYVPTNYTNVTAAYGLCNN--NNPPLCIAPIDGYFITNQTTTYSVDTE 435 NAPNG F H Y P ++ NVTA G C N I P +G I Q V+ Sbjct 927 QNAPNGIVFIHFSYTPDSFVNVTAIVGFCVKPANASQYAIVPANGRGIFIQ-----VNGS 981 Query 436 WYYTGSSFYKPEPITQAN 453 +Y T Y P IT + Sbjct 982 YYITARDMYMPRAITAGD 999 >RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltName: Full=E2; AltName: Full=Peplomer protein; Flags: Precursor [Porcine epidemic diarrhea virus CV777] Sequence ID: Q91AV1.1 Length: 1383 Range 1: 780 to 1246 Score:274 bits(701), Expect:6e-80, Method:Compositional matrix adjust., Identities:181/478(38%), Positives:255/478(53%), Gaps:37/478(7%) Query 31 AIPTNFSFSVTQEYIETSIQKVTVDCKQYVCNGFTRCEKLLVEYGQFCSKINQALHGANL 90 +IPTNFS S+ EY++ V+VDC YVCNG +RC++LL +Y C I AL + Sbjct 780 SIPTNFSMSIRTEYLQLYNTPVSVDCATYVCNGNSRCKQLLTQYTAACKTIESALQLSAR 839 Query 91 RQDESVYSLYSNIKTTSTQTLEYG----LNGD-FNLTLLQVPQI----GGSSSSYRSAIE 141 + V S+ T S + L+ NGD +N T + + G RS IE Sbjct 840 LESVEVNSML----TISEEALQLATISSFNGDGYNFTNVLGASVYDPASGRVVQKRSVIE 895 Query 142 DLLFDKVTIADPGYM-QGYDDCMKQGPQSARDLICAQYVSGYKVLPPLYDPNMEAAYTSS 200 DLLF+KV G + + Y C +S DL+CAQY SG VLP + D Y++S Sbjct 896 DLLFNKVVTNGLGTVDEDYKRC--SNGRSVADLVCAQYYSGVMVLPGVVDAEKLHMYSAS 953 Query 201 LLGSIAGAGWTAGLSSFAAIPFAQSMFYRLNGVGITQQVLSENQKLIANKFNQALGAMQT 260 L+G +A G TA AA+PF+ ++ RLN + + VL NQ+L+A FN A+G + + Sbjct 954 LIGGMALGGITAA----AALPFSYAVQARLNYLALQTDVLQRNQQLLAESFNSAIGNITS 1009 Query 261 GF---------TTSNL-----AFSKVQDAVNANAQALSKLASELSNTFGAISSSISDILA 306 F T+ L A +KVQ+ VN+ AL++L +L + F AISSSI DI + Sbjct 1010 AFESVKEAISQTSKGLNTVAHALTKVQEVVNSQGSALNQLTVQLQHNFQAISSSIDDIYS 1069 Query 307 RLDTVEQDAQIDRLINGRLISLNAFVSQQLVRSETAARSAQLASDKVNECVKSQSKRNGF 366 RLD + D Q+DRLI GRL +LNAFV+Q L + S +LA KVNECVKSQS+R GF Sbjct 1070 RLDILSADVQVDRLITGRLSALNAFVAQTLTKYTEVQASRKLAQQKVNECVKSQSQRYGF 1129 Query 367 CGS-GTHIVSFVVNAPNGFYFFHVGYVPTNYTNVTAAYGLCNNNNPPLCIAPIDGYFITN 425 CG G HI S V AP G F H VP ++ NV A GLC N L + T+ Sbjct 1130 CGGDGEHIFSLVQAAPQGLLFLHTVLVPGDFVNVLAIAGLCVNGEIALTLREPGLVLFTH 1189 Query 426 QTTTYSVDTEWYYTGSSFYKP-EPITQANSRYVSSDVKFDKLENNLPPPLLENSTDVD 482 + TY+ TE++ + ++P +P + S V + L ++ P ++ + DV+ Sbjct 1190 ELQTYTA-TEYFVSSRRMFEPRKPTVSDFVQIESCVVTYVNLTSDQLPDVIPDYIDVN 1246 >RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltName: Full=E2; AltName: Full=Peplomer protein; Flags: Precursor [Human coronavirus NL63] Sequence ID: Q6Q1S2.1 Length: 1356 Range 1: 741 to 1148 Score:273 bits(698), Expect:1e-79, Method:Compositional matrix adjust., Identities:177/419(42%), Positives:240/419(57%), Gaps:39/419(9%) Query 16 SPIVVTPINSS--GFTA------AIPTNFSFSVTQEYIETSIQKVTVDCKQYVCNGFTRC 67 S I V P NSS G +A +IP+N++ SV EY++ + + VDC YVCNG RC Sbjct 741 SLIPVRPRNSSDNGISAIITANLSIPSNWTTSVQVEYLQITSTPIVVDCATYVCNGNPRC 800 Query 68 EKLLVEYGQFCSKINQALH-GANLRQDE--SVYSLYSNIKTTSTQTLEYGLNGDFNLTLL 124 + LL +Y C I AL A+L ++ S+ + SN + + T GD+NL+ + Sbjct 801 KNLLKQYTSACKTIEDALRLSAHLETNDVSSMLTFDSNAFSLANVTSF----GDYNLSSV 856 Query 125 QVPQ--IGGSSSSYRSAIEDLLFDKVTIADPGYMQ-GYDDCMKQGPQSARDLICAQYVSG 181 +PQ I S + RSA+EDLLF KV + G + Y C K S DL CAQY +G Sbjct 857 -LPQRNIRSSRIAGRSALEDLLFSKVVTSGLGTVDVDYKSCTKG--LSIADLACAQYYNG 913 Query 182 YKVLPPLYDPNMEAAYTSSLLGSIAGAGWTAGLSSFAAIPFAQSMFYRLNGVGITQQVLS 241 VLP + D A YT SL+G + GL+S AAIPF+ ++ RLN V + VL Sbjct 914 IMVLPGVADAERMAMYTGSLIGGMV----LGGLTSAAAIPFSLALQARLNYVALQTDVLQ 969 Query 242 ENQKLIANKFNQALGAMQTGFTTSN--------------LAFSKVQDAVNANAQALSKLA 287 ENQK++A FN+A+ + F++ N +A +K+QD VN AL+ L Sbjct 970 ENQKILAASFNKAINNIVASFSSVNDAITQTAEAIHTVTIALNKIQDVVNQQGSALNHLT 1029 Query 288 SELSNTFGAISSSISDILARLDTVEQDAQIDRLINGRLISLNAFVSQQLVRSETAARSAQ 347 S+L + F AIS+SI I RLD+++ D Q+DRLI GRL +LNAFVSQ L + S + Sbjct 1030 SQLRHNFQAISNSIQAIYDRLDSIQADQQVDRLITGRLAALNAFVSQVLNKYTEVRGSRR 1089 Query 348 LASDKVNECVKSQSKRNGFCGSGTHIVSFVVNAPNGFYFFHVGYVPTNYTNVTAAYGLC 406 LA K+NECVKSQS R GFCG+GTHI S V +AP+G F H +PT+Y NV A G+C Sbjct 1090 LAQQKINECVKSQSNRYGFCGNGTHIFSIVNSAPDGLLFLHTVLLPTDYKNVKAWSGIC 1148 >RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltName: Full=E2; AltName: Full=Peplomer protein; Flags: Precursor [Human coronavirus 229E] Sequence ID: P15423.1 Length: 1173 Range 1: 583 to 967 Score:272 bits(695), Expect:1e-79, Method:Compositional matrix adjust., Identities:166/393(42%), Positives:217/393(55%), Gaps:25/393(6%) Query 31 AIPTNFSFSVTQEYIETSIQKVTVDCKQYVCNGFTRCEKLLVEYGQFCSKINQALHGANL 90 +IP+N++ SV EY++ + + VDC YVCNG RC +LL +Y C I AL + Sbjct 583 SIPSNWTTSVQVEYLQITSTPIVVDCSTYVCNGNVRCVELLKQYTSACKTIEDALRNSAR 642 Query 91 RQDESVYSLYSNIKTTSTQTLEYGLNGDFNLTLLQVPQI--GGSSSSYRSAIEDLLFDKV 148 + V + + K T GD+NL+ + +P + GS + RSAIED+LF K+ Sbjct 643 LESADVSEMLTFDKKAFTLA-NVSSFGDYNLSSV-IPSLPTSGSRVAGRSAIEDILFSKL 700 Query 149 TIADPGYMQG-YDDCMKQGPQSARDLICAQYVSGYKVLPPLYDPNMEAAYTSSLLGSIAG 207 + G + Y C K S DL CAQY +G VLP + D A YT SL+G IA Sbjct 701 VTSGLGTVDADYKKCTKG--LSIADLACAQYYNGIMVLPGVADAERMAMYTGSLIGGIA- 757 Query 208 AGWTAGLSSFAAIPFAQSMFYRLNGVGITQQVLSENQKLIANKFNQALGAMQTGFTTSN- 266 GL+S +IPF+ ++ RLN V + VL ENQK++A FN+A+ + FT N Sbjct 758 ---LGGLTSAVSIPFSLAIQARLNYVALQTDVLQENQKILAASFNKAMTNIVDAFTGVND 814 Query 267 -------------LAFSKVQDAVNANAQALSKLASELSNTFGAISSSISDILARLDTVEQ 313 A +K+QD VN +L+ L S+L F AISSSI I RLDT++ Sbjct 815 AITQTSQALQTVATALNKIQDVVNQQGNSLNHLTSQLRQNFQAISSSIQAIYDRLDTIQA 874 Query 314 DAQIDRLINGRLISLNAFVSQQLVRSETAARSAQLASDKVNECVKSQSKRNGFCGSGTHI 373 D Q+DRLI GRL +LN FVS L + S QLA KVNECVKSQSKR GFCG+GTHI Sbjct 875 DQQVDRLITGRLAALNVFVSHTLTKYTEVRASRQLAQQKVNECVKSQSKRYGFCGNGTHI 934 Query 374 VSFVVNAPNGFYFFHVGYVPTNYTNVTAAYGLC 406 S V AP G F H +PT Y +V A GLC Sbjct 935 FSIVNAAPEGLVFLHTVLLPTQYKDVEAWSGLC 967 >RecName: Full=Spike glycoprotein; Short=S glycoprotein; AltName: Full=E2; AltName: Full=Peplomer protein; Flags: Precursor [Scotophilus bat coronavirus 512] Sequence ID: Q0Q466.1 Length: 1371 Range 1: 783 to 1164 Score:264 bits(674), Expect:2e-76, Method:Compositional matrix adjust., Identities:164/393(42%), Positives:212/393(53%), Gaps:28/393(7%) Query 31 AIPTNFSFSVTQEYIETSIQKVTVDCKQYVCNGFTRCEKLLVEYGQFCSKINQALH-GAN 89 +IPTNF+ SV EYI+ + V+VDC YVCNG RC++LL +Y C I AL A Sbjct 783 SIPTNFTMSVRTEYIQLFNKPVSVDCAMYVCNGNDRCKQLLSQYTSACKNIESALQLSAR 842 Query 90 LRQDESVYSLYSNIKTTSTQTLEYGLNGDFNLTLLQVPQIGGSSSSYRSAIEDLLFDKVT 149 L E L + + T+ G +N T I ++ RS IED+LFDKV Sbjct 843 LESMEVNSMLTVSDEALKLATISQFPGGGYNFT-----NILPANPGARSVIEDILFDKVV 897 Query 150 IADPGYM-QGYDDCMKQGPQSARDLICAQYVSGYKVLPPLYDPNMEAAYTSSLLGSIAGA 208 + G + + Y C S DL CAQ+ +G VLP + D Y++SL+G + Sbjct 898 TSGLGTVDEDYKRC--SNGLSIADLACAQHYNGIMVLPGVADWEKVHMYSASLVGGMT-- 953 Query 209 GWTAGLSSFAAIPFAQSMFYRLNGVGITQQVLSENQKLIANKFNQALGAMQTGFTTSN-- 266 G++S AA+PF+ ++ RLN V + VL NQ+++AN FN A+ + F + N Sbjct 954 --LGGITSAAALPFSYAVQARLNYVALQTDVLQRNQQMLANSFNSAISNITLAFESVNNA 1011 Query 267 ------------LAFSKVQDAVNANAQALSKLASELSNTFGAISSSISDILARLDTVEQD 314 A SKVQD VN ALS+L +L N F AIS+SI DI +RLD + D Sbjct 1012 IYQTSAGLNTVAEALSKVQDVVNGQGNALSQLTVQLQNNFQAISNSIGDIYSRLDQITAD 1071 Query 315 AQIDRLINGRLISLNAFVSQQLVRSETAARSAQLASDKVNECVKSQSKRNGFCG-SGTHI 373 AQ+DRLI GRL +LNAFV+Q L + S LA KVNECVKSQS R GFCG G HI Sbjct 1072 AQVDRLITGRLAALNAFVAQSLTKYAEVQASRTLAKQKVNECVKSQSPRYGFCGDEGEHI 1131 Query 374 VSFVVNAPNGFYFFHVGYVPTNYTNVTAAYGLC 406 S AP G F H VP + NVTA GLC Sbjct 1132 FSLTQAAPQGLMFLHTVLVPNGFINVTAVTGLC 1164