FastQCFastQC Report
Пн 22 дек 2014
Ath_tae_CTTGTA_L003_R2_005.cleaned.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameAth_tae_CTTGTA_L003_R2_005.cleaned.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3850300
Sequences flagged as poor quality0
Sequence length50-101
%GC35

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGCCGC2503.2932244E-49.33355238-39
GCGGCCG2951.7785258E-48.70246636-37
CGCGGCC2750.0080193377.63803236-37
GCCATAC8150.0055269946.29941233
AGGGAGT9550.0043816925.86412672
Produced by FastQC (version 0.11.2)