******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.5.1 (Release date: Sun Jan 29 10:33:12 2023 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= housekeeping.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ JLJGGCKB_00019 1.0000 100 JLJGGCKB_00027 1.0000 100 JLJGGCKB_00029 1.0000 100 JLJGGCKB_00104 1.0000 100 JLJGGCKB_00108 1.0000 100 JLJGGCKB_00126 1.0000 100 JLJGGCKB_00139 1.0000 100 JLJGGCKB_00140 1.0000 100 JLJGGCKB_00144 1.0000 100 JLJGGCKB_00199 1.0000 100 JLJGGCKB_00236 1.0000 100 JLJGGCKB_00257 1.0000 100 JLJGGCKB_00286 1.0000 100 JLJGGCKB_00321 1.0000 100 JLJGGCKB_00330 1.0000 100 JLJGGCKB_00366 1.0000 100 JLJGGCKB_00378 1.0000 100 JLJGGCKB_00393 1.0000 100 JLJGGCKB_00396 1.0000 100 JLJGGCKB_00397 1.0000 100 JLJGGCKB_00467 1.0000 100 JLJGGCKB_00477 1.0000 100 JLJGGCKB_00490 1.0000 100 JLJGGCKB_00544 1.0000 100 JLJGGCKB_00552 1.0000 100 JLJGGCKB_00558 1.0000 100 JLJGGCKB_00584 1.0000 100 JLJGGCKB_00592 1.0000 100 JLJGGCKB_00611 1.0000 100 JLJGGCKB_00635 1.0000 100 JLJGGCKB_00657 1.0000 100 JLJGGCKB_00671 1.0000 100 JLJGGCKB_00689 1.0000 100 JLJGGCKB_00690 1.0000 100 JLJGGCKB_00701 1.0000 100 JLJGGCKB_00712 1.0000 100 JLJGGCKB_00747 1.0000 100 JLJGGCKB_00750 1.0000 100 JLJGGCKB_00751 1.0000 100 JLJGGCKB_00767 1.0000 100 JLJGGCKB_00783 1.0000 100 JLJGGCKB_00801 1.0000 100 JLJGGCKB_00818 1.0000 100 JLJGGCKB_00821 1.0000 100 JLJGGCKB_00882 1.0000 100 JLJGGCKB_00902 1.0000 100 JLJGGCKB_00958 1.0000 100 JLJGGCKB_01021 1.0000 100 JLJGGCKB_01031 1.0000 100 JLJGGCKB_01034 1.0000 100 JLJGGCKB_01035 1.0000 100 JLJGGCKB_01038 1.0000 100 JLJGGCKB_01076 1.0000 100 JLJGGCKB_01088 1.0000 100 JLJGGCKB_01093 1.0000 100 JLJGGCKB_01113 1.0000 100 JLJGGCKB_01115 1.0000 100 JLJGGCKB_01118 1.0000 100 JLJGGCKB_01134 1.0000 100 JLJGGCKB_01157 1.0000 100 JLJGGCKB_01162 1.0000 100 JLJGGCKB_01176 1.0000 100 JLJGGCKB_01178 1.0000 100 JLJGGCKB_01183 1.0000 100 JLJGGCKB_01193 1.0000 100 JLJGGCKB_01202 1.0000 100 JLJGGCKB_01205 1.0000 100 JLJGGCKB_01208 1.0000 100 JLJGGCKB_01221 1.0000 100 JLJGGCKB_01238 1.0000 100 JLJGGCKB_01245 1.0000 100 JLJGGCKB_01253 1.0000 100 JLJGGCKB_01257 1.0000 100 JLJGGCKB_01269 1.0000 100 JLJGGCKB_01283 1.0000 100 JLJGGCKB_01287 1.0000 100 JLJGGCKB_01297 1.0000 100 JLJGGCKB_01306 1.0000 100 JLJGGCKB_01339 1.0000 100 JLJGGCKB_01351 1.0000 100 JLJGGCKB_01356 1.0000 100 JLJGGCKB_01375 1.0000 100 JLJGGCKB_01389 1.0000 100 JLJGGCKB_01404 1.0000 100 JLJGGCKB_01410 1.0000 100 JLJGGCKB_01416 1.0000 100 JLJGGCKB_01417 1.0000 100 JLJGGCKB_01424 1.0000 100 JLJGGCKB_01446 1.0000 100 JLJGGCKB_01454 1.0000 100 JLJGGCKB_01456 1.0000 100 JLJGGCKB_01489 1.0000 100 JLJGGCKB_01493 1.0000 100 JLJGGCKB_01514 1.0000 100 JLJGGCKB_01517 1.0000 100 JLJGGCKB_01542 1.0000 100 JLJGGCKB_01551 1.0000 100 JLJGGCKB_01628 1.0000 100 JLJGGCKB_01644 1.0000 100 JLJGGCKB_01649 1.0000 100 JLJGGCKB_01650 1.0000 100 JLJGGCKB_01667 1.0000 100 JLJGGCKB_01731 1.0000 100 JLJGGCKB_01808 1.0000 100 JLJGGCKB_01818 1.0000 100 JLJGGCKB_01828 1.0000 100 JLJGGCKB_01844 1.0000 100 JLJGGCKB_01847 1.0000 100 JLJGGCKB_01854 1.0000 100 JLJGGCKB_01859 1.0000 100 JLJGGCKB_01881 1.0000 100 JLJGGCKB_01883 1.0000 100 JLJGGCKB_01906 1.0000 100 JLJGGCKB_01922 1.0000 100 JLJGGCKB_01936 1.0000 100 JLJGGCKB_01941 1.0000 100 JLJGGCKB_01953 1.0000 100 JLJGGCKB_01990 1.0000 100 JLJGGCKB_01997 1.0000 100 JLJGGCKB_02002 1.0000 100 JLJGGCKB_02008 1.0000 100 JLJGGCKB_02013 1.0000 100 JLJGGCKB_02021 1.0000 100 JLJGGCKB_02025 1.0000 100 JLJGGCKB_02045 1.0000 100 JLJGGCKB_02049 1.0000 100 JLJGGCKB_02051 1.0000 100 JLJGGCKB_02066 1.0000 100 JLJGGCKB_02070 1.0000 100 JLJGGCKB_02076 1.0000 100 JLJGGCKB_02087 1.0000 100 JLJGGCKB_02094 1.0000 100 JLJGGCKB_02109 1.0000 100 JLJGGCKB_02117 1.0000 100 JLJGGCKB_02119 1.0000 100 JLJGGCKB_02202 1.0000 100 JLJGGCKB_02212 1.0000 100 JLJGGCKB_02226 1.0000 100 JLJGGCKB_02242 1.0000 100 JLJGGCKB_02258 1.0000 100 JLJGGCKB_02277 1.0000 100 JLJGGCKB_02290 1.0000 100 JLJGGCKB_02291 1.0000 100 JLJGGCKB_02299 1.0000 100 JLJGGCKB_02302 1.0000 100 JLJGGCKB_02305 1.0000 100 JLJGGCKB_02309 1.0000 100 JLJGGCKB_02330 1.0000 100 JLJGGCKB_02333 1.0000 100 JLJGGCKB_02339 1.0000 100 JLJGGCKB_02346 1.0000 100 JLJGGCKB_02350 1.0000 100 JLJGGCKB_02353 1.0000 100 JLJGGCKB_02368 1.0000 100 JLJGGCKB_02389 1.0000 100 JLJGGCKB_02394 1.0000 100 JLJGGCKB_02418 1.0000 100 JLJGGCKB_02422 1.0000 100 JLJGGCKB_02438 1.0000 100 JLJGGCKB_02458 1.0000 100 JLJGGCKB_02464 1.0000 100 JLJGGCKB_02477 1.0000 100 JLJGGCKB_02478 1.0000 100 JLJGGCKB_02479 1.0000 100 JLJGGCKB_02486 1.0000 100 JLJGGCKB_02501 1.0000 100 JLJGGCKB_02503 1.0000 100 JLJGGCKB_02519 1.0000 100 JLJGGCKB_02520 1.0000 100 JLJGGCKB_02535 1.0000 100 JLJGGCKB_02539 1.0000 100 JLJGGCKB_02543 1.0000 100 JLJGGCKB_02548 1.0000 100 JLJGGCKB_02561 1.0000 100 JLJGGCKB_02586 1.0000 100 JLJGGCKB_02599 1.0000 100 JLJGGCKB_02600 1.0000 100 JLJGGCKB_02605 1.0000 100 JLJGGCKB_02632 1.0000 100 JLJGGCKB_02645 1.0000 100 JLJGGCKB_02658 1.0000 100 JLJGGCKB_02677 1.0000 100 JLJGGCKB_02725 1.0000 100 JLJGGCKB_02742 1.0000 100 JLJGGCKB_02754 1.0000 100 JLJGGCKB_02775 1.0000 100 JLJGGCKB_02780 1.0000 100 JLJGGCKB_02821 1.0000 100 JLJGGCKB_02822 1.0000 100 JLJGGCKB_02830 1.0000 100 JLJGGCKB_02847 1.0000 100 JLJGGCKB_02869 1.0000 100 JLJGGCKB_02874 1.0000 100 JLJGGCKB_02886 1.0000 100 JLJGGCKB_02905 1.0000 100 JLJGGCKB_02906 1.0000 100 JLJGGCKB_02907 1.0000 100 JLJGGCKB_02931 1.0000 100 JLJGGCKB_02941 1.0000 100 JLJGGCKB_02958 1.0000 100 JLJGGCKB_02963 1.0000 100 JLJGGCKB_02981 1.0000 100 JLJGGCKB_02998 1.0000 100 JLJGGCKB_03015 1.0000 100 JLJGGCKB_03024 1.0000 100 JLJGGCKB_03028 1.0000 100 JLJGGCKB_03036 1.0000 100 JLJGGCKB_03038 1.0000 100 JLJGGCKB_03039 1.0000 100 JLJGGCKB_03041 1.0000 100 JLJGGCKB_03049 1.0000 100 JLJGGCKB_03068 1.0000 100 JLJGGCKB_03070 1.0000 100 JLJGGCKB_03076 1.0000 100 JLJGGCKB_03087 1.0000 100 JLJGGCKB_03088 1.0000 100 JLJGGCKB_03113 1.0000 100 JLJGGCKB_03122 1.0000 100 JLJGGCKB_03123 1.0000 100 JLJGGCKB_03151 1.0000 100 JLJGGCKB_03155 1.0000 100 JLJGGCKB_03164 1.0000 100 JLJGGCKB_03197 1.0000 100 JLJGGCKB_03201 1.0000 100 JLJGGCKB_03202 1.0000 100 JLJGGCKB_03230 1.0000 100 JLJGGCKB_03252 1.0000 100 JLJGGCKB_03264 1.0000 100 JLJGGCKB_03323 1.0000 100 JLJGGCKB_03324 1.0000 100 JLJGGCKB_03325 1.0000 100 JLJGGCKB_03334 1.0000 100 JLJGGCKB_03340 1.0000 100 JLJGGCKB_03365 1.0000 100 JLJGGCKB_03372 1.0000 100 JLJGGCKB_03377 1.0000 100 JLJGGCKB_03387 1.0000 100 JLJGGCKB_03400 1.0000 100 JLJGGCKB_03402 1.0000 100 JLJGGCKB_03428 1.0000 100 JLJGGCKB_03435 1.0000 100 JLJGGCKB_03451 1.0000 100 JLJGGCKB_03452 1.0000 100 JLJGGCKB_03464 1.0000 100 JLJGGCKB_03477 1.0000 100 JLJGGCKB_03493 1.0000 100 JLJGGCKB_03529 1.0000 100 JLJGGCKB_03535 1.0000 100 JLJGGCKB_03537 1.0000 100 JLJGGCKB_03549 1.0000 100 JLJGGCKB_03590 1.0000 100 JLJGGCKB_03600 1.0000 100 JLJGGCKB_03607 1.0000 100 JLJGGCKB_03624 1.0000 100 JLJGGCKB_03634 1.0000 100 JLJGGCKB_03647 1.0000 100 JLJGGCKB_03673 1.0000 100 JLJGGCKB_03675 1.0000 100 JLJGGCKB_03723 1.0000 100 JLJGGCKB_03743 1.0000 100 JLJGGCKB_03778 1.0000 100 JLJGGCKB_03781 1.0000 100 JLJGGCKB_03790 1.0000 100 JLJGGCKB_03800 1.0000 100 JLJGGCKB_03804 1.0000 100 JLJGGCKB_03811 1.0000 100 JLJGGCKB_03817 1.0000 100 JLJGGCKB_03818 1.0000 100 JLJGGCKB_03873 1.0000 100 JLJGGCKB_03892 1.0000 100 JLJGGCKB_03900 1.0000 100 JLJGGCKB_03910 1.0000 100 JLJGGCKB_03925 1.0000 100 JLJGGCKB_03926 1.0000 100 JLJGGCKB_03948 1.0000 100 JLJGGCKB_03959 1.0000 100 JLJGGCKB_03981 1.0000 100 JLJGGCKB_03990 1.0000 100 JLJGGCKB_04013 1.0000 100 JLJGGCKB_04016 1.0000 100 JLJGGCKB_04028 1.0000 100 JLJGGCKB_04048 1.0000 100 JLJGGCKB_04050 1.0000 100 JLJGGCKB_04055 1.0000 100 JLJGGCKB_04088 1.0000 100 JLJGGCKB_04106 1.0000 100 JLJGGCKB_04119 1.0000 100 JLJGGCKB_04174 1.0000 100 JLJGGCKB_04178 1.0000 100 JLJGGCKB_04200 1.0000 100 JLJGGCKB_04211 1.0000 100 JLJGGCKB_04223 1.0000 100 JLJGGCKB_04224 1.0000 100 JLJGGCKB_04245 1.0000 100 JLJGGCKB_04254 1.0000 100 JLJGGCKB_04270 1.0000 100 JLJGGCKB_04274 1.0000 100 JLJGGCKB_04331 1.0000 100 JLJGGCKB_04336 1.0000 100 JLJGGCKB_04356 1.0000 100 JLJGGCKB_04357 1.0000 100 JLJGGCKB_04393 1.0000 100 JLJGGCKB_04416 1.0000 100 JLJGGCKB_04419 1.0000 100 JLJGGCKB_04428 1.0000 100 JLJGGCKB_04430 1.0000 100 JLJGGCKB_04440 1.0000 100 JLJGGCKB_04448 1.0000 100 JLJGGCKB_04452 1.0000 100 JLJGGCKB_04456 1.0000 100 JLJGGCKB_04457 1.0000 100 JLJGGCKB_04465 1.0000 100 JLJGGCKB_04467 1.0000 100 JLJGGCKB_04468 1.0000 100 JLJGGCKB_04486 1.0000 100 JLJGGCKB_04531 1.0000 100 JLJGGCKB_04545 1.0000 100 JLJGGCKB_04548 1.0000 100 JLJGGCKB_04549 1.0000 100 JLJGGCKB_04560 1.0000 100 JLJGGCKB_04574 1.0000 100 JLJGGCKB_04583 1.0000 100 JLJGGCKB_04590 1.0000 100 JLJGGCKB_04629 1.0000 100 JLJGGCKB_04655 1.0000 100 JLJGGCKB_04664 1.0000 100 JLJGGCKB_04675 1.0000 100 JLJGGCKB_04678 1.0000 100 JLJGGCKB_04721 1.0000 100 JLJGGCKB_04727 1.0000 100 JLJGGCKB_04731 1.0000 100 JLJGGCKB_04739 1.0000 100 JLJGGCKB_04757 1.0000 100 JLJGGCKB_04759 1.0000 100 JLJGGCKB_04760 1.0000 100 JLJGGCKB_04812 1.0000 100 JLJGGCKB_04815 1.0000 100 JLJGGCKB_04817 1.0000 100 JLJGGCKB_04859 1.0000 100 JLJGGCKB_04879 1.0000 100 JLJGGCKB_04889 1.0000 100 JLJGGCKB_04913 1.0000 100 JLJGGCKB_04915 1.0000 100 JLJGGCKB_04935 1.0000 100 JLJGGCKB_04946 1.0000 100 JLJGGCKB_04990 1.0000 100 JLJGGCKB_05058 1.0000 100 JLJGGCKB_05069 1.0000 100 JLJGGCKB_05077 1.0000 100 JLJGGCKB_05082 1.0000 100 JLJGGCKB_05099 1.0000 100 JLJGGCKB_05121 1.0000 100 JLJGGCKB_05156 1.0000 100 JLJGGCKB_05165 1.0000 100 JLJGGCKB_05175 1.0000 100 JLJGGCKB_05183 1.0000 100 JLJGGCKB_05185 1.0000 100 JLJGGCKB_05190 1.0000 100 JLJGGCKB_05197 1.0000 100 JLJGGCKB_05198 1.0000 100 JLJGGCKB_05219 1.0000 100 JLJGGCKB_05221 1.0000 100 JLJGGCKB_05226 1.0000 100 JLJGGCKB_05238 1.0000 100 JLJGGCKB_05256 1.0000 100 JLJGGCKB_05262 1.0000 100 JLJGGCKB_05264 1.0000 100 JLJGGCKB_05271 1.0000 100 JLJGGCKB_05274 1.0000 100 JLJGGCKB_05286 1.0000 100 JLJGGCKB_05312 1.0000 100 JLJGGCKB_05315 1.0000 100 JLJGGCKB_05317 1.0000 100 JLJGGCKB_05321 1.0000 100 JLJGGCKB_05323 1.0000 100 JLJGGCKB_05378 1.0000 100 JLJGGCKB_05391 1.0000 100 JLJGGCKB_05410 1.0000 100 JLJGGCKB_05435 1.0000 100 JLJGGCKB_05438 1.0000 100 JLJGGCKB_05439 1.0000 100 JLJGGCKB_05440 1.0000 100 JLJGGCKB_05441 1.0000 100 JLJGGCKB_05442 1.0000 100 JLJGGCKB_05443 1.0000 100 JLJGGCKB_05444 1.0000 100 JLJGGCKB_05445 1.0000 100 JLJGGCKB_05446 1.0000 100 JLJGGCKB_05447 1.0000 100 JLJGGCKB_05457 1.0000 100 JLJGGCKB_05477 1.0000 100 JLJGGCKB_05487 1.0000 100 JLJGGCKB_05493 1.0000 100 JLJGGCKB_05510 1.0000 100 JLJGGCKB_05520 1.0000 100 JLJGGCKB_05581 1.0000 100 JLJGGCKB_05585 1.0000 100 JLJGGCKB_05586 1.0000 100 JLJGGCKB_05588 1.0000 100 JLJGGCKB_05590 1.0000 100 JLJGGCKB_05598 1.0000 100 JLJGGCKB_05615 1.0000 100 JLJGGCKB_05618 1.0000 100 JLJGGCKB_05621 1.0000 100 JLJGGCKB_05625 1.0000 100 JLJGGCKB_05632 1.0000 100 JLJGGCKB_05646 1.0000 100 JLJGGCKB_05656 1.0000 100 JLJGGCKB_05677 1.0000 100 JLJGGCKB_05679 1.0000 100 JLJGGCKB_05686 1.0000 100 JLJGGCKB_05694 1.0000 100 JLJGGCKB_05697 1.0000 100 JLJGGCKB_05704 1.0000 100 JLJGGCKB_05714 1.0000 100 JLJGGCKB_05738 1.0000 100 JLJGGCKB_05744 1.0000 100 JLJGGCKB_05766 1.0000 100 JLJGGCKB_05777 1.0000 100 JLJGGCKB_05787 1.0000 100 JLJGGCKB_05795 1.0000 100 JLJGGCKB_05870 1.0000 100 JLJGGCKB_05880 1.0000 100 JLJGGCKB_05910 1.0000 100 JLJGGCKB_05912 1.0000 100 JLJGGCKB_05929 1.0000 100 JLJGGCKB_05941 1.0000 100 JLJGGCKB_05951 1.0000 100 JLJGGCKB_05977 1.0000 100 JLJGGCKB_05980 1.0000 100 JLJGGCKB_05984 1.0000 100 JLJGGCKB_05996 1.0000 100 JLJGGCKB_06033 1.0000 100 JLJGGCKB_06037 1.0000 100 JLJGGCKB_06041 1.0000 100 JLJGGCKB_06049 1.0000 100 JLJGGCKB_06083 1.0000 100 JLJGGCKB_06086 1.0000 100 JLJGGCKB_06091 1.0000 100 JLJGGCKB_06104 1.0000 100 JLJGGCKB_06118 1.0000 100 JLJGGCKB_06174 1.0000 100 JLJGGCKB_06175 1.0000 100 JLJGGCKB_06176 1.0000 100 JLJGGCKB_06177 1.0000 100 JLJGGCKB_06178 1.0000 100 JLJGGCKB_06179 1.0000 100 JLJGGCKB_06180 1.0000 100 JLJGGCKB_06181 1.0000 100 JLJGGCKB_06182 1.0000 100 JLJGGCKB_06183 1.0000 100 JLJGGCKB_06184 1.0000 100 JLJGGCKB_06185 1.0000 100 JLJGGCKB_06186 1.0000 100 JLJGGCKB_06187 1.0000 100 JLJGGCKB_06188 1.0000 100 JLJGGCKB_06189 1.0000 100 JLJGGCKB_06190 1.0000 100 JLJGGCKB_06191 1.0000 100 JLJGGCKB_06192 1.0000 100 JLJGGCKB_06193 1.0000 100 JLJGGCKB_06194 1.0000 100 JLJGGCKB_06195 1.0000 100 JLJGGCKB_06196 1.0000 100 JLJGGCKB_06197 1.0000 100 JLJGGCKB_06198 1.0000 100 JLJGGCKB_06199 1.0000 100 JLJGGCKB_06200 1.0000 100 JLJGGCKB_06201 1.0000 100 JLJGGCKB_06202 1.0000 100 JLJGGCKB_06203 1.0000 100 JLJGGCKB_06204 1.0000 100 JLJGGCKB_06206 1.0000 100 JLJGGCKB_06207 1.0000 100 JLJGGCKB_06208 1.0000 100 JLJGGCKB_06209 1.0000 100 JLJGGCKB_06210 1.0000 100 JLJGGCKB_06211 1.0000 100 JLJGGCKB_06219 1.0000 100 JLJGGCKB_06223 1.0000 100 JLJGGCKB_06305 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme housekeeping.fasta -dna -mod zoops -nmotifs 3 -minw 6 -maxw 50 -maxsites 50 model: mod= zoops nmotifs= 3 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 6 maxw= 50 nsites: minsites= 2 maxsites= 50 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 48100 N= 481 sample: seed= 0 hsfrac= 0 searchsize= 48100 norand= no csites= 1000 Letter frequencies in dataset: A 0.215 C 0.291 G 0.285 T 0.209 Background letter frequencies (from file dataset with add-one prior applied): A 0.215 C 0.291 G 0.285 T 0.209 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF AAAWWAWMMDDWTWTWHNWHWDWHTTTWW MEME-1 width = 29 sites = 50 llr = 601 E-value = 4.1e-030 ******************************************************************************** -------------------------------------------------------------------------------- Motif AAAWWAWMMDDWTWTWHNWHWDWHTTTWW MEME-1 Description -------------------------------------------------------------------------------- Simplified A 67656854453525233234333322256 pos.-specific C 1::2:1:43:1221::32:2:124221:: probability G 121:::11133:11111221142121::: matrix T 2233414:223353663353624245753 bits 2.3 2.0 1.8 1.6 Relative 1.4 * * Entropy 1.1 ** *** (17.3 bits) 0.9 ** *** ** * *** 0.7 ** *** * * ** * * *** 0.5 ******** * ***** * * **** 0.2 ***************** *********** 0.0 ----------------------------- Multilevel AAAAAAAAAATATATTTTTATGTCTTTTA consensus TTT TCCGATATAAAAATAAAAGAAAT sequence TG C CG C T T C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAWWAWMMDDWTWTWHNWHWDWHTTTWW MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- ----------------------------- JLJGGCKB_01176 57 4.66e-11 CGGACGCGTG AAAATATAAATACATACGTATGGATTTAA ACTCAAGAGG JLJGGCKB_03334 54 9.13e-10 GAACGGCTAA AAATAATACGTATATTATAAAGTAGGTAT TATAAAAGCC JLJGGCKB_02394 6 9.13e-10 AATAT AAAAAATAAGCTTATATATTTATGCTTAA GTCTTAAAAA JLJGGCKB_01644 5 3.88e-09 AATC AAAAAAAACGTCTAATTTTATTCCTCAAA CCATTAATAT JLJGGCKB_04935 22 7.08e-09 TGCGTCAGAC AAAATAAACATATATGTATATGTCTGCTA ATTCGCCACG JLJGGCKB_04486 44 7.08e-09 ACGCTTGACC AATATATCTTCATAAAAGAATATTTTTAA CAATTCATTC JLJGGCKB_01517 54 1.45e-08 TTCGCTATGC GAAATATGATTTTGTTTTATTGATTTTTT GAAAAAGAGG JLJGGCKB_04178 48 5.50e-08 TTCCCGCAGC ATAAAATGATAACTATTATCATTCGTTAA TCCTTCTGCT JLJGGCKB_04727 54 7.07e-08 GCCGCTCGAT AATCAATCAAATCGATACTCTTTCTATAA AAAATAGAAC JLJGGCKB_04859 25 1.02e-07 CCGTTTCCTA TATCTATCCAAATATACTAAAGGTTATAT AACTAGCTGT JLJGGCKB_00801 6 1.46e-07 TTTTC GAAAAAAGTGTTTTTTCTTCAAATGCTTA GCGCTTGCCC JLJGGCKB_01859 52 1.64e-07 CGTGTTCTAC AAGCAATATATTTTTATAATTGTTGCTTT GGACGGGGCA JLJGGCKB_02368 8 1.85e-07 AAATACA AAATATAACGAAAATGCCTTATTCTCTAA CGGAAATATT JLJGGCKB_03264 59 2.32e-07 CAACCTACAC AATAAAACGATACTTTTATATCGATACTA ATACATCTAT JLJGGCKB_01990 64 2.32e-07 TAAACAATTC AAAAAAAAAGGTTAGGTAACTACTCTTTT TGTTTATT JLJGGCKB_00592 43 3.62e-07 CGATCCCACC GGAAAATGAGTAATTTTCATTAGTTATTA GTCGTTTAGC JLJGGCKB_05321 24 5.57e-07 GTGATTAACA AAAATCAATAATTATTGGGATAGCCATTA GAAAAGCTTT JLJGGCKB_03549 48 5.57e-07 AACCTGCCCG TAATAATCGGCTGATTATTAATCAGTTTA CTTTATAGCC JLJGGCKB_03252 36 6.19e-07 CCCGAACCTA AGTATAACTAGATGATTGTCAATCACTTA GTTATACGTA JLJGGCKB_02658 34 8.43e-07 ATCGTTTGCG AAAAAATAAGGACTTTACGTAAAACTTAG ATTCGATTAT JLJGGCKB_02422 8 8.43e-07 CTTAATA ATATTTAAATTACTAAAGTATGACGGTTA CAGCGGCCGT JLJGGCKB_01134 11 8.43e-07 CGGTTTGTAA AAACTAAACAAACATTCGGTAACCGTCAA ATTGAGGCGC JLJGGCKB_01828 35 9.33e-07 CAGTATACGA AGTTTAGAAATTTATTCTAGAAAAATATT CTAGTCAGCG JLJGGCKB_01297 60 1.14e-06 CTGTAAAAAT GAATAATCGTGAATTACTTGTTCTGTTTT GGAGAATTAA JLJGGCKB_00126 52 1.14e-06 GATGCCTGGC TATTTCTATATATTTTCATATCGATCTTT ATCTTGAAGG JLJGGCKB_05996 47 1.26e-06 ACCCATCTAA ATAATAAGCTATCTGACCAAAGACTTTTT GTCTATGGAG JLJGGCKB_03041 69 1.68e-06 ATGCGCCGGA CTAAAAAACAGAAAGTAGGTAGCCTATAA GCA JLJGGCKB_05256 10 1.85e-06 AATAAGAAT CAACTAACTTGCAAGTTATTTTTGTTTTA TCTGACCGGT JLJGGCKB_03624 44 1.85e-06 GAGTGTTCTT ATGCTAACTTTTAGTAATAGTATTTTTTA TACGACGACG JLJGGCKB_02049 59 2.23e-06 AAGACCGGTT TATTATTCCAATCATTGGTCTGACCTATA GTTGGATGTT JLJGGCKB_05929 24 2.45e-06 ACTTTGTTCC AACTATTCCAGTTGATTTTATTCGTTTTA TCAACTGACC JLJGGCKB_04088 17 2.69e-06 AGGACTCATT AAACTAGCCAGAATATCAACTGGATTAAT GAGCCTATTC JLJGGCKB_03123 62 2.69e-06 GCGAGCAGTT CATTTAAATATCACTAGCTATGTTTATTA CCTCCAGTCC JLJGGCKB_02013 13 2.69e-06 CGACAGTAGC ATATAATCAATCATGAGTGATTAATTAAT TGGCGTTTCT JLJGGCKB_05598 50 3.22e-06 TGACGAAAGG TTAGATAAAGCTTATTCTTCTCACGTTTA GTTTCGACTG JLJGGCKB_03900 51 3.22e-06 GCGTTTCAAG GAATAATCAGGCAATAATCAAAACATTAT TGCCATACAG JLJGGCKB_00821 54 3.22e-06 GCGACCTCTT TGTCAAACATGTTTTTAGTCGATACTATA TTGGCAAGGA JLJGGCKB_03323 8 3.85e-06 GTCTACG AATAACTCAAATTCATATTTTTCATCCAA AGCATTCCCA JLJGGCKB_02548 52 4.20e-06 CCGCAGCTAC AGTACATACGACTTTAATTTACTACATTA CGGAAAGTCA JLJGGCKB_00144 57 4.20e-06 TAAGCGCCGG AATTAAACAAGCGATAAATGGGTCAAAAA AGCTCCTCGA JLJGGCKB_05264 57 5.44e-06 AACACTTTGC TTATCAAAGACATAATTTATGGACTTTTT GTCCATCCAA JLJGGCKB_03818 51 5.44e-06 ACGCTTAATA AGAATAGCCTCATTATACATTGATATATT GTAATACATC JLJGGCKB_02309 54 7.01e-06 GCAATACATA CGGATATCCGTATATTCAGCTTTCCATAT ATCCAGGAAG JLJGGCKB_02277 15 7.01e-06 AGCCCACGAT CAAAAAACGAGGTTTAACTGATTCCATAA GGCCGTCATA JLJGGCKB_02302 8 7.61e-06 GAAGACG AAATTAACATACGCTGCGTATGTCAAAAA TCATGGAGAC JLJGGCKB_03811 45 8.96e-06 TAAGCATCCA ATACAAAAAAAATCATCGACGATAAGAAA AACAGATCGT JLJGGCKB_02754 69 8.96e-06 AAACCGCGCA GAATATTGCGAATATTTCTATCGGAGTTA GTG JLJGGCKB_02094 52 8.96e-06 ACTAACTGCG GGAAATAACGAATAGTTTGGAGAAATAAA CTCCAATTAA JLJGGCKB_03981 22 1.14e-05 TCATTCGCGA TAAAAAAACAAACGTTTCGGGGCAGCTAT TGTTCGTTTT JLJGGCKB_01076 64 1.55e-05 TACTTTTTGC TAGGAAAGATGTTGGACAAATATCTTTTT GACTTAAG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAWWAWMMDDWTWTWHNWHWDWHTTTWW MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- JLJGGCKB_01176 4.7e-11 56_[+1]_15 JLJGGCKB_03334 9.1e-10 53_[+1]_18 JLJGGCKB_02394 9.1e-10 5_[+1]_66 JLJGGCKB_01644 3.9e-09 4_[+1]_67 JLJGGCKB_04935 7.1e-09 21_[+1]_50 JLJGGCKB_04486 7.1e-09 43_[+1]_28 JLJGGCKB_01517 1.5e-08 53_[+1]_18 JLJGGCKB_04178 5.5e-08 47_[+1]_24 JLJGGCKB_04727 7.1e-08 53_[+1]_18 JLJGGCKB_04859 1e-07 24_[+1]_47 JLJGGCKB_00801 1.5e-07 5_[+1]_66 JLJGGCKB_01859 1.6e-07 51_[+1]_20 JLJGGCKB_02368 1.8e-07 7_[+1]_64 JLJGGCKB_03264 2.3e-07 58_[+1]_13 JLJGGCKB_01990 2.3e-07 63_[+1]_8 JLJGGCKB_00592 3.6e-07 42_[+1]_29 JLJGGCKB_05321 5.6e-07 23_[+1]_48 JLJGGCKB_03549 5.6e-07 47_[+1]_24 JLJGGCKB_03252 6.2e-07 35_[+1]_36 JLJGGCKB_02658 8.4e-07 33_[+1]_38 JLJGGCKB_02422 8.4e-07 7_[+1]_64 JLJGGCKB_01134 8.4e-07 10_[+1]_61 JLJGGCKB_01828 9.3e-07 34_[+1]_37 JLJGGCKB_01297 1.1e-06 59_[+1]_12 JLJGGCKB_00126 1.1e-06 51_[+1]_20 JLJGGCKB_05996 1.3e-06 46_[+1]_25 JLJGGCKB_03041 1.7e-06 68_[+1]_3 JLJGGCKB_05256 1.8e-06 9_[+1]_62 JLJGGCKB_03624 1.8e-06 43_[+1]_28 JLJGGCKB_02049 2.2e-06 58_[+1]_13 JLJGGCKB_05929 2.4e-06 23_[+1]_48 JLJGGCKB_04088 2.7e-06 16_[+1]_55 JLJGGCKB_03123 2.7e-06 61_[+1]_10 JLJGGCKB_02013 2.7e-06 12_[+1]_59 JLJGGCKB_05598 3.2e-06 49_[+1]_22 JLJGGCKB_03900 3.2e-06 50_[+1]_21 JLJGGCKB_00821 3.2e-06 53_[+1]_18 JLJGGCKB_03323 3.8e-06 7_[+1]_64 JLJGGCKB_02548 4.2e-06 51_[+1]_20 JLJGGCKB_00144 4.2e-06 56_[+1]_15 JLJGGCKB_05264 5.4e-06 56_[+1]_15 JLJGGCKB_03818 5.4e-06 50_[+1]_21 JLJGGCKB_02309 7e-06 53_[+1]_18 JLJGGCKB_02277 7e-06 14_[+1]_57 JLJGGCKB_02302 7.6e-06 7_[+1]_64 JLJGGCKB_03811 9e-06 44_[+1]_27 JLJGGCKB_02754 9e-06 68_[+1]_3 JLJGGCKB_02094 9e-06 51_[+1]_20 JLJGGCKB_03981 1.1e-05 21_[+1]_50 JLJGGCKB_01076 1.6e-05 63_[+1]_8 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAWWAWMMDDWTWTWHNWHWDWHTTTWW MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AAAWWAWMMDDWTWTWHNWHWDWHTTTWW width=29 seqs=50 JLJGGCKB_01176 ( 57) AAAATATAAATACATACGTATGGATTTAA 1 JLJGGCKB_03334 ( 54) AAATAATACGTATATTATAAAGTAGGTAT 1 JLJGGCKB_02394 ( 6) AAAAAATAAGCTTATATATTTATGCTTAA 1 JLJGGCKB_01644 ( 5) AAAAAAAACGTCTAATTTTATTCCTCAAA 1 JLJGGCKB_04935 ( 22) AAAATAAACATATATGTATATGTCTGCTA 1 JLJGGCKB_04486 ( 44) AATATATCTTCATAAAAGAATATTTTTAA 1 JLJGGCKB_01517 ( 54) GAAATATGATTTTGTTTTATTGATTTTTT 1 JLJGGCKB_04178 ( 48) ATAAAATGATAACTATTATCATTCGTTAA 1 JLJGGCKB_04727 ( 54) AATCAATCAAATCGATACTCTTTCTATAA 1 JLJGGCKB_04859 ( 25) TATCTATCCAAATATACTAAAGGTTATAT 1 JLJGGCKB_00801 ( 6) GAAAAAAGTGTTTTTTCTTCAAATGCTTA 1 JLJGGCKB_01859 ( 52) AAGCAATATATTTTTATAATTGTTGCTTT 1 JLJGGCKB_02368 ( 8) AAATATAACGAAAATGCCTTATTCTCTAA 1 JLJGGCKB_03264 ( 59) AATAAAACGATACTTTTATATCGATACTA 1 JLJGGCKB_01990 ( 64) AAAAAAAAAGGTTAGGTAACTACTCTTTT 1 JLJGGCKB_00592 ( 43) GGAAAATGAGTAATTTTCATTAGTTATTA 1 JLJGGCKB_05321 ( 24) AAAATCAATAATTATTGGGATAGCCATTA 1 JLJGGCKB_03549 ( 48) TAATAATCGGCTGATTATTAATCAGTTTA 1 JLJGGCKB_03252 ( 36) AGTATAACTAGATGATTGTCAATCACTTA 1 JLJGGCKB_02658 ( 34) AAAAAATAAGGACTTTACGTAAAACTTAG 1 JLJGGCKB_02422 ( 8) ATATTTAAATTACTAAAGTATGACGGTTA 1 JLJGGCKB_01134 ( 11) AAACTAAACAAACATTCGGTAACCGTCAA 1 JLJGGCKB_01828 ( 35) AGTTTAGAAATTTATTCTAGAAAAATATT 1 JLJGGCKB_01297 ( 60) GAATAATCGTGAATTACTTGTTCTGTTTT 1 JLJGGCKB_00126 ( 52) TATTTCTATATATTTTCATATCGATCTTT 1 JLJGGCKB_05996 ( 47) ATAATAAGCTATCTGACCAAAGACTTTTT 1 JLJGGCKB_03041 ( 69) CTAAAAAACAGAAAGTAGGTAGCCTATAA 1 JLJGGCKB_05256 ( 10) CAACTAACTTGCAAGTTATTTTTGTTTTA 1 JLJGGCKB_03624 ( 44) ATGCTAACTTTTAGTAATAGTATTTTTTA 1 JLJGGCKB_02049 ( 59) TATTATTCCAATCATTGGTCTGACCTATA 1 JLJGGCKB_05929 ( 24) AACTATTCCAGTTGATTTTATTCGTTTTA 1 JLJGGCKB_04088 ( 17) AAACTAGCCAGAATATCAACTGGATTAAT 1 JLJGGCKB_03123 ( 62) CATTTAAATATCACTAGCTATGTTTATTA 1 JLJGGCKB_02013 ( 13) ATATAATCAATCATGAGTGATTAATTAAT 1 JLJGGCKB_05598 ( 50) TTAGATAAAGCTTATTCTTCTCACGTTTA 1 JLJGGCKB_03900 ( 51) GAATAATCAGGCAATAATCAAAACATTAT 1 JLJGGCKB_00821 ( 54) TGTCAAACATGTTTTTAGTCGATACTATA 1 JLJGGCKB_03323 ( 8) AATAACTCAAATTCATATTTTTCATCCAA 1 JLJGGCKB_02548 ( 52) AGTACATACGACTTTAATTTACTACATTA 1 JLJGGCKB_00144 ( 57) AATTAAACAAGCGATAAATGGGTCAAAAA 1 JLJGGCKB_05264 ( 57) TTATCAAAGACATAATTTATGGACTTTTT 1 JLJGGCKB_03818 ( 51) AGAATAGCCTCATTATACATTGATATATT 1 JLJGGCKB_02309 ( 54) CGGATATCCGTATATTCAGCTTTCCATAT 1 JLJGGCKB_02277 ( 15) CAAAAAACGAGGTTTAACTGATTCCATAA 1 JLJGGCKB_02302 ( 8) AAATTAACATACGCTGCGTATGTCAAAAA 1 JLJGGCKB_03811 ( 45) ATACAAAAAAAATCATCGACGATAAGAAA 1 JLJGGCKB_02754 ( 69) GAATATTGCGAATATTTCTATCGGAGTTA 1 JLJGGCKB_02094 ( 52) GGAAATAACGAATAGTTTGGAGAAATAAA 1 JLJGGCKB_03981 ( 22) TAAAAAAACAAACGTTTCGGGGCAGCTAT 1 JLJGGCKB_01076 ( 64) TAGGAAAGATGTTGGACAAATATCTTTTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAWWAWMMDDWTWTWHNWHWDWHTTTWW MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 29 n= 34420 bayes= 11.3479 E= 4.1e-030 143 -154 -103 -22 162 -1229 -83 -22 158 -386 -183 31 110 -69 -283 61 143 -286 -1229 86 190 -228 -1229 -58 122 -1229 -225 107 104 53 -103 -1229 82 22 -151 -22 110 -1229 7 20 48 -128 -13 61 116 -86 -383 70 -10 -54 -225 137 110 -186 -103 61 16 -1229 -103 157 58 -1229 -183 152 48 4 -183 61 16 -54 -37 70 48 -386 -83 131 82 -40 -103 31 58 -1229 -151 147 48 -154 34 20 28 -69 -83 94 48 46 -183 7 -25 -69 -51 107 16 -86 -151 126 4 -186 -1229 174 110 -1229 -1229 137 158 -1229 -383 70 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAWWAWMMDDWTWTWHNWHWDWHTTTWW MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 29 nsites= 50 E= 4.1e-030 0.580000 0.100000 0.140000 0.180000 0.660000 0.000000 0.160000 0.180000 0.640000 0.020000 0.080000 0.260000 0.460000 0.180000 0.040000 0.320000 0.580000 0.040000 0.000000 0.380000 0.800000 0.060000 0.000000 0.140000 0.500000 0.000000 0.060000 0.440000 0.440000 0.420000 0.140000 0.000000 0.380000 0.340000 0.100000 0.180000 0.460000 0.000000 0.300000 0.240000 0.300000 0.120000 0.260000 0.320000 0.480000 0.160000 0.020000 0.340000 0.200000 0.200000 0.060000 0.540000 0.460000 0.080000 0.140000 0.320000 0.240000 0.000000 0.140000 0.620000 0.320000 0.000000 0.080000 0.600000 0.300000 0.300000 0.080000 0.320000 0.240000 0.200000 0.220000 0.340000 0.300000 0.020000 0.160000 0.520000 0.380000 0.220000 0.140000 0.260000 0.320000 0.000000 0.100000 0.580000 0.300000 0.100000 0.360000 0.240000 0.260000 0.180000 0.160000 0.400000 0.300000 0.400000 0.080000 0.220000 0.180000 0.180000 0.200000 0.440000 0.240000 0.160000 0.100000 0.500000 0.220000 0.080000 0.000000 0.700000 0.460000 0.000000 0.000000 0.540000 0.640000 0.000000 0.020000 0.340000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAWWAWMMDDWTWTWHNWHWDWHTTTWW MEME-1 regular expression -------------------------------------------------------------------------------- AA[AT][AT][AT]A[AT][AC][AC][AGT][TAG][AT][TAC][AT][TA][TA][TAC][TAGC][TA][ATC][TA][GAT][TA][CAT][TG][TA][TA][TA][AT] -------------------------------------------------------------------------------- Time 87.60 secs. ******************************************************************************** ******************************************************************************** MOTIF KTKTKVHTVTTTTTY MEME-2 width = 15 sites = 22 llr = 254 E-value = 3.6e-002 ******************************************************************************** -------------------------------------------------------------------------------- Motif KTKTKVHTVTTTTTY MEME-2 Description -------------------------------------------------------------------------------- Simplified A :::::3314:1:2:: pos.-specific C :1:1:43:3:::::5 probability G 6:5143::2::::2: matrix T 49586:49199a784 bits 2.3 2.0 * 1.8 *** 1.6 * * *** * Relative 1.4 * * *** * Entropy 1.1 ***** * *** * (16.7 bits) 0.9 ***** * ***** 0.7 ***** * ***** 0.5 ***** * ****** 0.2 *************** 0.0 --------------- Multilevel GTTTTCTTATTTTTC consensus T G GAC C A T sequence GA G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KTKTKVHTVTTTTTY MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- --------------- JLJGGCKB_00108 76 7.01e-09 TTTAGTCAGA GTTTTCTTGTTTTTT TTGGAGTTTT JLJGGCKB_03377 19 4.76e-08 TTCCCATTCT TTTTGCATATTTTTC CCACTGAGTG JLJGGCKB_00104 70 3.23e-07 CGTGTTACGC GTGTTAGTCTTTTTT GTTGGCCCTG JLJGGCKB_05632 16 4.07e-07 TGATACGGGC GTTTGCAAATTTTTC CGCGCCTGGC JLJGGCKB_06182 6 4.51e-07 ATAGC GTTTTTATATTTATC TGAGTCGATA JLJGGCKB_00393 84 6.30e-07 GGAATGAGTG TTGTTGCTATTTTTA GG JLJGGCKB_05444 74 1.18e-06 TTGGAAATTG GTTGTGCTGTTTTTC AGCCCTCCTT JLJGGCKB_00330 7 1.18e-06 AAGTCA GTGTGAATTTTTATC CCCAAGCCCA JLJGGCKB_02906 22 1.29e-06 CCAGTAGCGA GGGTTCTTCTTTTTC ATTGGTGGTC JLJGGCKB_05984 59 1.71e-06 CCGGGGACCC TTTTTGATGTTTCTT ACCTTGCTGA JLJGGCKB_04467 74 1.71e-06 CGACCGGCCC TTGTTCTTCTTGTTC TCCGTGCTTA JLJGGCKB_01542 61 1.88e-06 CGGTCAAGCA GTTTGACTCATTTTT CCCCGCCTAC JLJGGCKB_06181 14 2.23e-06 TACAAGAACC TCTTTACTATTTTGT ACCCCGAAAA JLJGGCKB_05175 43 2.23e-06 GTACCGAGGT GTTTTCCTTTTTGTT CTAGGGTCCG JLJGGCKB_04174 16 2.86e-06 GCTGGCTCAA GTGCGATTGTTTATT GCGTAATGTG JLJGGCKB_04990 9 3.36e-06 GGAACGGA TTGTTCTTCTATTGC AACGGTTGAC JLJGGCKB_05069 62 3.94e-06 GGTCGTACTA TTTTTGAAATTTAGT CTTGTGATAG JLJGGCKB_04760 33 3.94e-06 GAGGTGGTCC GTTCGGTTCTTTTGT AAGTGAGGAA JLJGGCKB_00477 46 5.01e-06 GTATAGCAGG GTGTGGCTATATATC AAGCAGGGTT JLJGGCKB_02021 26 6.34e-06 TGCCGGATTT TTTCTCCTGTTTTTG CGTGATTTTG JLJGGCKB_04028 40 6.84e-06 TGGTATTCAA GTGGTATTAGTTTTC CCAGCATTAC JLJGGCKB_00544 10 7.41e-06 CCCTCCAAG GCGTGATACTTTTTC CTTATGCGCC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KTKTKVHTVTTTTTY MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- JLJGGCKB_00108 7e-09 75_[+2]_10 JLJGGCKB_03377 4.8e-08 18_[+2]_67 JLJGGCKB_00104 3.2e-07 69_[+2]_16 JLJGGCKB_05632 4.1e-07 15_[+2]_70 JLJGGCKB_06182 4.5e-07 5_[+2]_80 JLJGGCKB_00393 6.3e-07 83_[+2]_2 JLJGGCKB_05444 1.2e-06 73_[+2]_12 JLJGGCKB_00330 1.2e-06 6_[+2]_79 JLJGGCKB_02906 1.3e-06 21_[+2]_64 JLJGGCKB_05984 1.7e-06 58_[+2]_27 JLJGGCKB_04467 1.7e-06 73_[+2]_12 JLJGGCKB_01542 1.9e-06 60_[+2]_25 JLJGGCKB_06181 2.2e-06 13_[+2]_72 JLJGGCKB_05175 2.2e-06 42_[+2]_43 JLJGGCKB_04174 2.9e-06 15_[+2]_70 JLJGGCKB_04990 3.4e-06 8_[+2]_77 JLJGGCKB_05069 3.9e-06 61_[+2]_24 JLJGGCKB_04760 3.9e-06 32_[+2]_53 JLJGGCKB_00477 5e-06 45_[+2]_40 JLJGGCKB_02021 6.3e-06 25_[+2]_60 JLJGGCKB_04028 6.8e-06 39_[+2]_46 JLJGGCKB_00544 7.4e-06 9_[+2]_76 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KTKTKVHTVTTTTTY MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF KTKTKVHTVTTTTTY width=15 seqs=22 JLJGGCKB_00108 ( 76) GTTTTCTTGTTTTTT 1 JLJGGCKB_03377 ( 19) TTTTGCATATTTTTC 1 JLJGGCKB_00104 ( 70) GTGTTAGTCTTTTTT 1 JLJGGCKB_05632 ( 16) GTTTGCAAATTTTTC 1 JLJGGCKB_06182 ( 6) GTTTTTATATTTATC 1 JLJGGCKB_00393 ( 84) TTGTTGCTATTTTTA 1 JLJGGCKB_05444 ( 74) GTTGTGCTGTTTTTC 1 JLJGGCKB_00330 ( 7) GTGTGAATTTTTATC 1 JLJGGCKB_02906 ( 22) GGGTTCTTCTTTTTC 1 JLJGGCKB_05984 ( 59) TTTTTGATGTTTCTT 1 JLJGGCKB_04467 ( 74) TTGTTCTTCTTGTTC 1 JLJGGCKB_01542 ( 61) GTTTGACTCATTTTT 1 JLJGGCKB_06181 ( 14) TCTTTACTATTTTGT 1 JLJGGCKB_05175 ( 43) GTTTTCCTTTTTGTT 1 JLJGGCKB_04174 ( 16) GTGCGATTGTTTATT 1 JLJGGCKB_04990 ( 9) TTGTTCTTCTATTGC 1 JLJGGCKB_05069 ( 62) TTTTTGAAATTTAGT 1 JLJGGCKB_04760 ( 33) GTTCGGTTCTTTTGT 1 JLJGGCKB_00477 ( 46) GTGTGGCTATATATC 1 JLJGGCKB_02021 ( 26) TTTCTCCTGTTTTTG 1 JLJGGCKB_04028 ( 40) GTGGTATTAGTTTTC 1 JLJGGCKB_00544 ( 10) GCGTGATACTTTTTC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KTKTKVHTVTTTTTY MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 15 n= 41154 bayes= 12.4025 E= 3.6e-002 -1110 -1110 116 80 -1110 -168 -265 205 -1110 -1110 67 138 -1110 -109 -165 189 -1110 -1110 35 161 57 32 -6 -220 35 13 -265 80 -65 -1110 -1110 205 76 13 -33 -120 -224 -1110 -265 212 -124 -1110 -1110 212 -1110 -1110 -265 219 8 -268 -265 170 -1110 -1110 -65 197 -224 78 -265 97 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KTKTKVHTVTTTTTY MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 15 nsites= 22 E= 3.6e-002 0.000000 0.000000 0.636364 0.363636 0.000000 0.090909 0.045455 0.863636 0.000000 0.000000 0.454545 0.545455 0.000000 0.136364 0.090909 0.772727 0.000000 0.000000 0.363636 0.636364 0.318182 0.363636 0.272727 0.045455 0.272727 0.318182 0.045455 0.363636 0.136364 0.000000 0.000000 0.863636 0.363636 0.318182 0.227273 0.090909 0.045455 0.000000 0.045455 0.909091 0.090909 0.000000 0.000000 0.909091 0.000000 0.000000 0.045455 0.954545 0.227273 0.045455 0.045455 0.681818 0.000000 0.000000 0.181818 0.818182 0.045455 0.500000 0.045455 0.409091 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KTKTKVHTVTTTTTY MEME-2 regular expression -------------------------------------------------------------------------------- [GT]T[TG]T[TG][CAG][TCA]T[ACG]TTT[TA]T[CT] -------------------------------------------------------------------------------- Time 169.74 secs. ******************************************************************************** ******************************************************************************** MOTIF MTTTTGSKGSKGNAGSSSGCSMCGNWWACGWWARMRSGYTWWARA MEME-3 width = 45 sites = 6 llr = 195 E-value = 4.2e-001 ******************************************************************************** -------------------------------------------------------------------------------- Motif MTTTTGSKGSKGNAGSSSGCSMCGNWWACGWWARMRSGYTWWARA MEME-3 Description -------------------------------------------------------------------------------- Simplified A 7::::::::2::38::2:2223:2237a::57a555::::7555a pos.-specific C 3:::2:5:23:22::557:537822:::82::::5:3:7:::2:: probability G :::228577537328533725::732::272::5:57a:2:223: matrix T :aa872:32:722:2:::22::2:353::233::::::383322: bits 2.3 ** * * * 2.0 ** * * * 1.8 ** * * * * 1.6 *** * * * * * * Relative 1.4 *** * ** ** * ** * Entropy 1.1 **** * * * ** * *** ** **** * (46.8 bits) 0.9 ******** * *** * ** *** ********** * 0.7 ********* ** *** ** *** ***************** ** 0.5 ************ ****** **** ***************** ** 0.2 ************ *********** ******************** 0.0 --------------------------------------------- Multilevel ATTTTGCGGGTGAAGCCCGCGCCGGTAACGAAAAAAGGCTAAAAA consensus C GT CG G GGG CA TAT TT GCGC T TT G sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MTTTTGSKGSKGNAGSSSGCSMCGNWWACGWWARMRSGYTWWARA MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- --------------------------------------------- JLJGGCKB_05156 9 1.17e-17 CACAGGCC CTTTTGGGGCGGAAGCCCGCCCCAAAAACGAAAAAACGCTAAGGA CGAAAAGTAG JLJGGCKB_05656 37 1.49e-17 TCGAACGTAA ATTTTGGTCGTGTAGGGCTTGCCGTTTACGGAAACAGGTTATAAA GGTTACGGCC JLJGGCKB_02368 44 2.98e-17 TAACGGAAAT ATTTTTCGGGTGCGGCAGGGGCCGTTAACGTAAGCGGGCTATAAA AGGTACATCT JLJGGCKB_00029 13 2.72e-15 CGCGGACTTG CTTTTGCGGGGCGAGGCCGCCCCGGAAACTTTAGCGGGCTTGCGA CCAGCGTTCG JLJGGCKB_05588 10 1.18e-14 TAAAAAGGC ATTGGGCTGCTGGAGCGGGCGACCCGTACGAAAGAGCGCGAAAAA GGCCACTAAA JLJGGCKB_02586 44 1.63e-13 AACCAGACCT ATTTCGGGTATTAATGCCAAAATGGTAAGCATAAAAGGTTTATTA GCTCCCACAG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MTTTTGSKGSKGNAGSSSGCSMCGNWWACGWWARMRSGYTWWARA MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- JLJGGCKB_05156 1.2e-17 8_[+3]_47 JLJGGCKB_05656 1.5e-17 36_[+3]_19 JLJGGCKB_02368 3e-17 43_[+3]_12 JLJGGCKB_00029 2.7e-15 12_[+3]_43 JLJGGCKB_05588 1.2e-14 9_[+3]_46 JLJGGCKB_02586 1.6e-13 43_[+3]_12 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MTTTTGSKGSKGNAGSSSGCSMCGNWWACGWWARMRSGYTWWARA MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF MTTTTGSKGSKGNAGSSSGCSMCGNWWACGWWARMRSGYTWWARA width=45 seqs=6 JLJGGCKB_05156 ( 9) CTTTTGGGGCGGAAGCCCGCCCCAAAAACGAAAAAACGCTAAGGA 1 JLJGGCKB_05656 ( 37) ATTTTGGTCGTGTAGGGCTTGCCGTTTACGGAAACAGGTTATAAA 1 JLJGGCKB_02368 ( 44) ATTTTTCGGGTGCGGCAGGGGCCGTTAACGTAAGCGGGCTATAAA 1 JLJGGCKB_00029 ( 13) CTTTTGCGGGGCGAGGCCGCCCCGGAAACTTTAGCGGGCTTGCGA 1 JLJGGCKB_05588 ( 10) ATTGGGCTGCTGGAGCGGGCGACCCGTACGAAAGAGCGCGAAAAA 1 JLJGGCKB_02586 ( 44) ATTTCGGGTATTAATGCCAAAATGGTAAGCATAAAAGGTTTATTA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MTTTTGSKGSKGNAGSSSGCSMCGNWWACGWWARMRSGYTWWARA MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 45 n= 26724 bayes= 12.5681 E= 4.2e-001 163 19 -923 -923 -923 -923 -923 226 -923 -923 -923 226 -923 -923 -77 199 -923 -80 -77 167 -923 -923 155 -33 -923 78 81 -923 -923 -923 122 67 -923 -80 122 -33 -36 19 81 -923 -923 -923 22 167 -923 -80 122 -33 64 -80 22 -33 196 -923 -77 -923 -923 -923 155 -33 -923 78 81 -923 -36 78 22 -923 -923 119 22 -923 -36 -923 122 -33 -36 78 -77 -33 -36 19 81 -923 64 119 -923 -923 -923 152 -923 -33 -36 -80 122 -923 -36 -80 22 67 64 -923 -77 126 163 -923 -923 67 222 -923 -923 -923 -923 152 -77 -923 -923 -80 122 -33 122 -923 -77 67 163 -923 -923 67 222 -923 -923 -923 122 -923 81 -923 122 78 -923 -923 122 -923 81 -923 -923 19 122 -923 -923 -923 181 -923 -923 119 -923 67 -923 -923 -77 199 163 -923 -923 67 122 -923 -77 67 122 -80 -77 -33 122 -923 22 -33 222 -923 -923 -923 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MTTTTGSKGSKGNAGSSSGCSMCGNWWACGWWARMRSGYTWWARA MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 45 nsites= 6 E= 4.2e-001 0.666667 0.333333 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.166667 0.833333 0.000000 0.166667 0.166667 0.666667 0.000000 0.000000 0.833333 0.166667 0.000000 0.500000 0.500000 0.000000 0.000000 0.000000 0.666667 0.333333 0.000000 0.166667 0.666667 0.166667 0.166667 0.333333 0.500000 0.000000 0.000000 0.000000 0.333333 0.666667 0.000000 0.166667 0.666667 0.166667 0.333333 0.166667 0.333333 0.166667 0.833333 0.000000 0.166667 0.000000 0.000000 0.000000 0.833333 0.166667 0.000000 0.500000 0.500000 0.000000 0.166667 0.500000 0.333333 0.000000 0.000000 0.666667 0.333333 0.000000 0.166667 0.000000 0.666667 0.166667 0.166667 0.500000 0.166667 0.166667 0.166667 0.333333 0.500000 0.000000 0.333333 0.666667 0.000000 0.000000 0.000000 0.833333 0.000000 0.166667 0.166667 0.166667 0.666667 0.000000 0.166667 0.166667 0.333333 0.333333 0.333333 0.000000 0.166667 0.500000 0.666667 0.000000 0.000000 0.333333 1.000000 0.000000 0.000000 0.000000 0.000000 0.833333 0.166667 0.000000 0.000000 0.166667 0.666667 0.166667 0.500000 0.000000 0.166667 0.333333 0.666667 0.000000 0.000000 0.333333 1.000000 0.000000 0.000000 0.000000 0.500000 0.000000 0.500000 0.000000 0.500000 0.500000 0.000000 0.000000 0.500000 0.000000 0.500000 0.000000 0.000000 0.333333 0.666667 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.666667 0.000000 0.333333 0.000000 0.000000 0.166667 0.833333 0.666667 0.000000 0.000000 0.333333 0.500000 0.000000 0.166667 0.333333 0.500000 0.166667 0.166667 0.166667 0.500000 0.000000 0.333333 0.166667 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MTTTTGSKGSKGNAGSSSGCSMCGNWWACGWWARMRSGYTWWARA MEME-3 regular expression -------------------------------------------------------------------------------- [AC]TTTTG[CG][GT]G[GC][TG]G[AG]AG[CG][CG][CG]GC[GC][CA]CG[GT][TA][AT]ACG[AT][AT]A[AG][AC][AG][GC]G[CT]T[AT][AT]A[AG]A -------------------------------------------------------------------------------- Time 250.20 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- JLJGGCKB_00019 9.42e-01 100 JLJGGCKB_00027 5.98e-01 100 JLJGGCKB_00029 1.91e-11 12_[+3(2.72e-15)]_43 JLJGGCKB_00104 8.44e-04 69_[+2(3.23e-07)]_16 JLJGGCKB_00108 1.03e-06 75_[+2(7.01e-09)]_10 JLJGGCKB_00126 4.77e-06 51_[+1(1.14e-06)]_20 JLJGGCKB_00139 7.07e-01 100 JLJGGCKB_00140 4.01e-01 100 JLJGGCKB_00144 1.90e-03 56_[+1(4.20e-06)]_15 JLJGGCKB_00199 4.00e-02 100 JLJGGCKB_00236 5.07e-01 100 JLJGGCKB_00257 9.26e-02 100 JLJGGCKB_00286 9.87e-01 100 JLJGGCKB_00321 6.07e-01 100 JLJGGCKB_00330 1.46e-03 6_[+2(1.18e-06)]_79 JLJGGCKB_00366 9.74e-01 100 JLJGGCKB_00378 4.07e-02 100 JLJGGCKB_00393 1.23e-04 83_[+2(6.30e-07)]_2 JLJGGCKB_00396 1.49e-01 100 JLJGGCKB_00397 3.59e-01 100 JLJGGCKB_00467 1.37e-02 100 JLJGGCKB_00477 1.06e-03 45_[+2(5.01e-06)]_40 JLJGGCKB_00490 2.28e-01 100 JLJGGCKB_00544 2.13e-03 9_[+2(7.41e-06)]_76 JLJGGCKB_00552 6.44e-01 100 JLJGGCKB_00558 6.17e-01 100 JLJGGCKB_00584 9.70e-01 100 JLJGGCKB_00592 8.46e-05 42_[+1(3.62e-07)]_29 JLJGGCKB_00611 6.34e-01 100 JLJGGCKB_00635 4.04e-01 100 JLJGGCKB_00657 3.55e-03 47_[+2(4.37e-05)]_38 JLJGGCKB_00671 5.60e-01 100 JLJGGCKB_00689 2.01e-01 100 JLJGGCKB_00690 3.89e-03 100 JLJGGCKB_00701 9.44e-01 100 JLJGGCKB_00712 9.52e-01 100 JLJGGCKB_00747 6.26e-01 100 JLJGGCKB_00750 2.41e-01 100 JLJGGCKB_00751 3.17e-01 100 JLJGGCKB_00767 8.38e-01 100 JLJGGCKB_00783 2.91e-01 100 JLJGGCKB_00801 4.44e-05 5_[+1(1.46e-07)]_66 JLJGGCKB_00818 9.46e-01 100 JLJGGCKB_00821 1.13e-03 53_[+1(3.22e-06)]_18 JLJGGCKB_00882 5.30e-01 100 JLJGGCKB_00902 1.46e-01 100 JLJGGCKB_00958 6.27e-01 100 JLJGGCKB_01021 3.14e-01 100 JLJGGCKB_01031 1.48e-01 100 JLJGGCKB_01034 8.13e-01 100 JLJGGCKB_01035 9.91e-01 100 JLJGGCKB_01038 9.16e-01 100 JLJGGCKB_01076 8.89e-03 63_[+1(1.55e-05)]_8 JLJGGCKB_01088 8.31e-01 100 JLJGGCKB_01093 1.41e-01 100 JLJGGCKB_01113 2.05e-03 24_[+2(7.20e-05)]_61 JLJGGCKB_01115 5.90e-02 100 JLJGGCKB_01118 5.65e-02 100 JLJGGCKB_01134 4.66e-04 10_[+1(8.43e-07)]_61 JLJGGCKB_01157 1.23e-01 100 JLJGGCKB_01162 1.65e-01 100 JLJGGCKB_01176 4.92e-09 56_[+1(4.66e-11)]_15 JLJGGCKB_01178 8.77e-01 100 JLJGGCKB_01183 7.97e-01 100 JLJGGCKB_01193 9.43e-01 100 JLJGGCKB_01202 1.43e-03 34_[+3(6.13e-05)]_21 JLJGGCKB_01205 1.46e-01 100 JLJGGCKB_01208 3.52e-01 100 JLJGGCKB_01221 1.19e-01 100 JLJGGCKB_01238 1.19e-01 100 JLJGGCKB_01245 9.98e-01 100 JLJGGCKB_01253 9.98e-01 100 JLJGGCKB_01257 1.59e-01 100 JLJGGCKB_01269 8.47e-01 100 JLJGGCKB_01283 7.12e-01 100 JLJGGCKB_01287 4.83e-01 100 JLJGGCKB_01297 3.95e-04 59_[+1(1.14e-06)]_12 JLJGGCKB_01306 9.98e-01 100 JLJGGCKB_01339 6.58e-01 100 JLJGGCKB_01351 6.86e-03 69_[+2(8.87e-05)]_16 JLJGGCKB_01356 4.33e-01 100 JLJGGCKB_01375 9.41e-01 100 JLJGGCKB_01389 3.93e-01 100 JLJGGCKB_01404 1.62e-01 100 JLJGGCKB_01410 8.42e-01 100 JLJGGCKB_01416 4.49e-01 100 JLJGGCKB_01417 9.14e-01 100 JLJGGCKB_01424 7.25e-01 100 JLJGGCKB_01446 7.88e-01 100 JLJGGCKB_01454 9.18e-01 100 JLJGGCKB_01456 8.96e-01 100 JLJGGCKB_01489 6.80e-01 100 JLJGGCKB_01493 6.85e-01 100 JLJGGCKB_01514 9.51e-01 100 JLJGGCKB_01517 3.91e-09 53_[+1(1.45e-08)]_18 JLJGGCKB_01542 6.65e-04 60_[+2(1.88e-06)]_25 JLJGGCKB_01551 3.78e-01 100 JLJGGCKB_01628 1.09e-01 100 JLJGGCKB_01644 5.42e-06 4_[+1(3.88e-09)]_67 JLJGGCKB_01649 5.84e-01 100 JLJGGCKB_01650 9.79e-01 100 JLJGGCKB_01667 9.19e-01 100 JLJGGCKB_01731 2.66e-01 100 JLJGGCKB_01808 3.65e-01 100 JLJGGCKB_01818 1.77e-02 100 JLJGGCKB_01828 3.11e-06 34_[+1(9.33e-07)]_37 JLJGGCKB_01844 9.92e-01 100 JLJGGCKB_01847 9.03e-01 100 JLJGGCKB_01854 7.07e-01 100 JLJGGCKB_01859 6.05e-07 51_[+1(1.64e-07)]_20 JLJGGCKB_01881 3.45e-02 100 JLJGGCKB_01883 8.98e-01 100 JLJGGCKB_01906 6.76e-02 100 JLJGGCKB_01922 3.93e-01 100 JLJGGCKB_01936 9.82e-01 100 JLJGGCKB_01941 5.97e-01 100 JLJGGCKB_01953 2.18e-01 100 JLJGGCKB_01990 3.47e-05 63_[+1(2.32e-07)]_8 JLJGGCKB_01997 1.00e+00 100 JLJGGCKB_02002 5.09e-02 100 JLJGGCKB_02008 5.86e-01 100 JLJGGCKB_02013 1.49e-03 12_[+1(2.69e-06)]_59 JLJGGCKB_02021 2.37e-04 25_[+2(6.34e-06)]_60 JLJGGCKB_02025 7.93e-01 100 JLJGGCKB_02045 9.76e-01 100 JLJGGCKB_02049 9.84e-04 58_[+1(2.23e-06)]_13 JLJGGCKB_02051 5.24e-02 100 JLJGGCKB_02066 8.02e-01 100 JLJGGCKB_02070 2.06e-01 100 JLJGGCKB_02076 1.33e-02 100 JLJGGCKB_02087 1.00e+00 100 JLJGGCKB_02094 2.63e-03 51_[+1(8.96e-06)]_20 JLJGGCKB_02109 3.84e-01 100 JLJGGCKB_02117 4.63e-01 100 JLJGGCKB_02119 5.43e-01 100 JLJGGCKB_02202 6.16e-02 100 JLJGGCKB_02212 8.39e-01 100 JLJGGCKB_02226 9.10e-02 100 JLJGGCKB_02242 6.88e-01 100 JLJGGCKB_02258 9.84e-01 100 JLJGGCKB_02277 3.23e-03 14_[+1(7.01e-06)]_57 JLJGGCKB_02290 8.53e-01 100 JLJGGCKB_02291 6.44e-01 100 JLJGGCKB_02299 2.92e-01 100 JLJGGCKB_02302 1.38e-02 7_[+1(7.61e-06)]_64 JLJGGCKB_02305 7.81e-01 100 JLJGGCKB_02309 1.33e-02 53_[+1(7.01e-06)]_18 JLJGGCKB_02330 2.54e-02 100 JLJGGCKB_02333 1.00e+00 100 JLJGGCKB_02339 2.66e-01 100 JLJGGCKB_02346 7.93e-01 100 JLJGGCKB_02350 5.09e-01 100 JLJGGCKB_02353 2.27e-01 100 JLJGGCKB_02368 9.11e-18 7_[+1(1.85e-07)]_7_[+3(2.98e-17)]_\ 12 JLJGGCKB_02389 8.88e-01 100 JLJGGCKB_02394 1.60e-06 5_[+1(9.13e-10)]_66 JLJGGCKB_02418 9.21e-01 100 JLJGGCKB_02422 2.35e-03 7_[+1(8.43e-07)]_64 JLJGGCKB_02438 1.00e+00 100 JLJGGCKB_02458 9.78e-01 100 JLJGGCKB_02464 3.00e-01 100 JLJGGCKB_02477 7.51e-01 100 JLJGGCKB_02478 9.83e-01 100 JLJGGCKB_02479 7.63e-02 100 JLJGGCKB_02486 4.57e-01 100 JLJGGCKB_02501 2.63e-01 100 JLJGGCKB_02503 8.25e-01 100 JLJGGCKB_02519 4.59e-01 100 JLJGGCKB_02520 4.92e-02 100 JLJGGCKB_02535 5.05e-02 100 JLJGGCKB_02539 9.08e-01 100 JLJGGCKB_02543 1.00e+00 100 JLJGGCKB_02548 1.06e-02 51_[+1(4.20e-06)]_20 JLJGGCKB_02561 8.90e-01 100 JLJGGCKB_02586 1.67e-11 43_[+3(1.63e-13)]_12 JLJGGCKB_02599 4.22e-02 100 JLJGGCKB_02600 6.46e-01 100 JLJGGCKB_02605 2.08e-01 100 JLJGGCKB_02632 4.00e-02 100 JLJGGCKB_02645 3.25e-01 100 JLJGGCKB_02658 1.29e-03 33_[+1(8.43e-07)]_38 JLJGGCKB_02677 3.93e-01 100 JLJGGCKB_02725 6.96e-01 100 JLJGGCKB_02742 8.74e-01 100 JLJGGCKB_02754 1.71e-04 68_[+1(8.96e-06)]_3 JLJGGCKB_02775 7.61e-01 100 JLJGGCKB_02780 7.69e-01 100 JLJGGCKB_02821 1.71e-01 100 JLJGGCKB_02822 4.28e-01 100 JLJGGCKB_02830 1.41e-01 100 JLJGGCKB_02847 6.75e-01 100 JLJGGCKB_02869 9.93e-01 100 JLJGGCKB_02874 2.92e-01 100 JLJGGCKB_02886 9.68e-01 100 JLJGGCKB_02905 1.90e-01 100 JLJGGCKB_02906 3.07e-05 21_[+2(1.29e-06)]_[+3(9.05e-05)]_19 JLJGGCKB_02907 7.41e-01 100 JLJGGCKB_02931 1.13e-02 100 JLJGGCKB_02941 1.86e-01 100 JLJGGCKB_02958 1.84e-01 100 JLJGGCKB_02963 2.36e-01 100 JLJGGCKB_02981 9.79e-01 100 JLJGGCKB_02998 1.00e+00 100 JLJGGCKB_03015 9.17e-01 100 JLJGGCKB_03024 4.94e-01 100 JLJGGCKB_03028 3.59e-01 100 JLJGGCKB_03036 1.15e-01 100 JLJGGCKB_03038 1.50e-02 100 JLJGGCKB_03039 6.69e-01 100 JLJGGCKB_03041 1.73e-03 68_[+1(1.68e-06)]_3 JLJGGCKB_03049 6.21e-02 28_[+3(6.67e-05)]_27 JLJGGCKB_03068 2.49e-01 100 JLJGGCKB_03070 1.99e-01 100 JLJGGCKB_03076 9.96e-01 100 JLJGGCKB_03087 9.46e-01 100 JLJGGCKB_03088 1.54e-01 100 JLJGGCKB_03113 1.00e+00 100 JLJGGCKB_03122 4.21e-01 100 JLJGGCKB_03123 2.34e-03 61_[+1(2.69e-06)]_10 JLJGGCKB_03151 2.29e-01 100 JLJGGCKB_03155 1.00e+00 100 JLJGGCKB_03164 8.56e-01 100 JLJGGCKB_03197 9.79e-01 100 JLJGGCKB_03201 2.15e-01 100 JLJGGCKB_03202 2.03e-01 100 JLJGGCKB_03230 9.35e-01 100 JLJGGCKB_03252 9.51e-04 35_[+1(6.19e-07)]_36 JLJGGCKB_03264 3.67e-04 58_[+1(2.32e-07)]_13 JLJGGCKB_03323 4.97e-03 7_[+1(3.85e-06)]_64 JLJGGCKB_03324 3.19e-01 100 JLJGGCKB_03325 2.51e-02 9_[+1(7.57e-05)]_62 JLJGGCKB_03334 1.85e-06 53_[+1(9.13e-10)]_18 JLJGGCKB_03340 5.16e-01 100 JLJGGCKB_03365 8.54e-01 100 JLJGGCKB_03372 3.24e-02 28_[+3(8.90e-05)]_27 JLJGGCKB_03377 1.10e-04 18_[+2(4.76e-08)]_67 JLJGGCKB_03387 9.99e-01 100 JLJGGCKB_03400 8.32e-01 100 JLJGGCKB_03402 3.60e-01 100 JLJGGCKB_03428 9.90e-01 100 JLJGGCKB_03435 5.37e-01 100 JLJGGCKB_03451 4.71e-01 100 JLJGGCKB_03452 6.71e-01 100 JLJGGCKB_03464 9.97e-01 100 JLJGGCKB_03477 1.00e+00 100 JLJGGCKB_03493 9.18e-01 100 JLJGGCKB_03529 5.09e-01 100 JLJGGCKB_03535 6.16e-01 100 JLJGGCKB_03537 9.84e-01 100 JLJGGCKB_03549 2.33e-04 47_[+1(5.57e-07)]_24 JLJGGCKB_03590 9.18e-01 100 JLJGGCKB_03600 9.95e-01 100 JLJGGCKB_03607 9.80e-01 100 JLJGGCKB_03624 1.77e-03 43_[+1(1.85e-06)]_28 JLJGGCKB_03634 4.52e-01 100 JLJGGCKB_03647 7.05e-01 100 JLJGGCKB_03673 3.77e-01 100 JLJGGCKB_03675 7.97e-01 100 JLJGGCKB_03723 7.46e-01 100 JLJGGCKB_03743 9.99e-01 100 JLJGGCKB_03778 6.21e-01 100 JLJGGCKB_03781 2.04e-02 100 JLJGGCKB_03790 9.50e-01 100 JLJGGCKB_03800 4.18e-01 100 JLJGGCKB_03804 3.02e-01 100 JLJGGCKB_03811 6.82e-03 44_[+1(8.96e-06)]_27 JLJGGCKB_03817 8.39e-01 100 JLJGGCKB_03818 4.88e-03 50_[+1(5.44e-06)]_21 JLJGGCKB_03873 1.13e-02 100 JLJGGCKB_03892 8.89e-01 100 JLJGGCKB_03900 8.61e-03 50_[+1(3.22e-06)]_21 JLJGGCKB_03910 5.05e-01 100 JLJGGCKB_03925 1.32e-01 100 JLJGGCKB_03926 6.14e-01 100 JLJGGCKB_03948 2.51e-01 100 JLJGGCKB_03959 4.22e-01 100 JLJGGCKB_03981 6.32e-03 21_[+1(1.14e-05)]_50 JLJGGCKB_03990 1.00e+00 100 JLJGGCKB_04013 9.38e-01 100 JLJGGCKB_04016 1.06e-01 100 JLJGGCKB_04028 9.28e-04 39_[+2(6.84e-06)]_46 JLJGGCKB_04048 8.04e-01 100 JLJGGCKB_04050 9.39e-01 100 JLJGGCKB_04055 7.59e-01 100 JLJGGCKB_04088 5.28e-03 16_[+1(2.69e-06)]_55 JLJGGCKB_04106 9.94e-01 100 JLJGGCKB_04119 1.15e-01 100 JLJGGCKB_04174 2.26e-05 15_[+2(2.86e-06)]_70 JLJGGCKB_04178 1.00e-05 47_[+1(5.50e-08)]_24 JLJGGCKB_04200 4.02e-01 100 JLJGGCKB_04211 4.46e-01 100 JLJGGCKB_04223 9.99e-01 100 JLJGGCKB_04224 6.94e-01 100 JLJGGCKB_04245 1.01e-02 39_[+2(6.83e-05)]_46 JLJGGCKB_04254 1.05e-02 14_[+3(4.59e-05)]_41 JLJGGCKB_04270 9.58e-01 100 JLJGGCKB_04274 1.77e-01 100 JLJGGCKB_04331 9.04e-01 100 JLJGGCKB_04336 9.99e-01 100 JLJGGCKB_04356 9.50e-01 100 JLJGGCKB_04357 9.99e-01 100 JLJGGCKB_04393 9.08e-03 73_[+2(3.89e-05)]_12 JLJGGCKB_04416 4.94e-01 100 JLJGGCKB_04419 3.13e-02 100 JLJGGCKB_04428 9.99e-01 100 JLJGGCKB_04430 1.00e+00 100 JLJGGCKB_04440 7.80e-01 100 JLJGGCKB_04448 6.97e-02 100 JLJGGCKB_04452 6.16e-01 100 JLJGGCKB_04456 9.64e-01 100 JLJGGCKB_04457 2.54e-01 100 JLJGGCKB_04465 6.85e-01 100 JLJGGCKB_04467 4.74e-03 73_[+2(1.71e-06)]_12 JLJGGCKB_04468 1.84e-01 100 JLJGGCKB_04486 6.08e-06 43_[+1(7.08e-09)]_28 JLJGGCKB_04531 8.56e-01 100 JLJGGCKB_04545 5.14e-01 100 JLJGGCKB_04548 9.57e-01 100 JLJGGCKB_04549 2.79e-01 100 JLJGGCKB_04560 9.33e-01 100 JLJGGCKB_04574 9.53e-01 100 JLJGGCKB_04583 6.09e-02 38_[+3(8.90e-05)]_17 JLJGGCKB_04590 6.48e-01 100 JLJGGCKB_04629 8.93e-01 100 JLJGGCKB_04655 9.72e-01 100 JLJGGCKB_04664 9.85e-01 100 JLJGGCKB_04675 5.23e-01 100 JLJGGCKB_04678 8.74e-01 100 JLJGGCKB_04721 5.89e-01 100 JLJGGCKB_04727 2.89e-05 53_[+1(7.07e-08)]_18 JLJGGCKB_04731 3.91e-01 100 JLJGGCKB_04739 3.90e-01 100 JLJGGCKB_04757 7.02e-01 100 JLJGGCKB_04759 5.18e-01 100 JLJGGCKB_04760 8.77e-03 32_[+2(3.94e-06)]_53 JLJGGCKB_04812 9.49e-01 100 JLJGGCKB_04815 9.98e-01 100 JLJGGCKB_04817 3.93e-01 100 JLJGGCKB_04859 1.61e-04 24_[+1(1.02e-07)]_47 JLJGGCKB_04879 7.25e-01 100 JLJGGCKB_04889 9.91e-01 100 JLJGGCKB_04913 9.24e-01 100 JLJGGCKB_04915 3.97e-01 100 JLJGGCKB_04935 2.47e-06 21_[+1(7.08e-09)]_50 JLJGGCKB_04946 3.97e-01 100 JLJGGCKB_04990 9.74e-04 8_[+2(3.36e-06)]_77 JLJGGCKB_05058 6.35e-01 100 JLJGGCKB_05069 3.67e-04 61_[+2(3.94e-06)]_24 JLJGGCKB_05077 1.00e+00 100 JLJGGCKB_05082 2.29e-02 100 JLJGGCKB_05099 3.01e-01 100 JLJGGCKB_05121 5.02e-01 100 JLJGGCKB_05156 2.76e-14 8_[+3(1.17e-17)]_47 JLJGGCKB_05165 4.97e-02 100 JLJGGCKB_05175 4.83e-04 42_[+2(2.23e-06)]_43 JLJGGCKB_05183 2.06e-01 100 JLJGGCKB_05185 5.61e-01 100 JLJGGCKB_05190 9.89e-02 100 JLJGGCKB_05197 7.81e-01 100 JLJGGCKB_05198 4.25e-01 100 JLJGGCKB_05219 1.61e-02 100 JLJGGCKB_05221 9.43e-01 100 JLJGGCKB_05226 9.80e-01 100 JLJGGCKB_05238 2.02e-01 100 JLJGGCKB_05256 6.33e-05 9_[+1(1.85e-06)]_62 JLJGGCKB_05262 1.17e-01 100 JLJGGCKB_05264 7.15e-04 56_[+1(5.44e-06)]_15 JLJGGCKB_05271 9.75e-01 100 JLJGGCKB_05274 5.69e-01 100 JLJGGCKB_05286 1.18e-01 100 JLJGGCKB_05312 9.75e-01 100 JLJGGCKB_05315 9.95e-01 100 JLJGGCKB_05317 9.94e-01 100 JLJGGCKB_05321 1.80e-03 23_[+1(5.57e-07)]_48 JLJGGCKB_05323 3.45e-01 100 JLJGGCKB_05378 9.16e-01 100 JLJGGCKB_05391 2.28e-01 100 JLJGGCKB_05410 7.13e-01 100 JLJGGCKB_05435 5.03e-02 100 JLJGGCKB_05438 2.91e-01 100 JLJGGCKB_05439 2.55e-02 100 JLJGGCKB_05440 4.94e-01 100 JLJGGCKB_05441 1.10e-01 100 JLJGGCKB_05442 7.55e-01 100 JLJGGCKB_05443 2.40e-01 100 JLJGGCKB_05444 3.85e-04 73_[+2(1.18e-06)]_12 JLJGGCKB_05445 1.85e-02 62_[+2(4.37e-05)]_23 JLJGGCKB_05446 3.63e-01 100 JLJGGCKB_05447 6.97e-01 100 JLJGGCKB_05457 9.53e-01 100 JLJGGCKB_05477 9.97e-01 100 JLJGGCKB_05487 8.20e-01 100 JLJGGCKB_05493 1.95e-01 100 JLJGGCKB_05510 1.64e-01 100 JLJGGCKB_05520 4.39e-02 100 JLJGGCKB_05581 9.76e-01 100 JLJGGCKB_05585 9.49e-01 100 JLJGGCKB_05586 9.78e-01 100 JLJGGCKB_05588 2.12e-11 9_[+3(1.18e-14)]_46 JLJGGCKB_05590 3.05e-02 100 JLJGGCKB_05598 4.55e-03 49_[+1(3.22e-06)]_22 JLJGGCKB_05615 2.38e-01 100 JLJGGCKB_05618 9.38e-01 100 JLJGGCKB_05621 7.20e-01 100 JLJGGCKB_05625 3.65e-01 100 JLJGGCKB_05632 9.84e-04 15_[+2(4.07e-07)]_70 JLJGGCKB_05646 2.59e-01 100 JLJGGCKB_05656 4.57e-16 36_[+3(1.49e-17)]_19 JLJGGCKB_05677 9.93e-01 100 JLJGGCKB_05679 9.64e-01 100 JLJGGCKB_05686 3.92e-01 100 JLJGGCKB_05694 9.57e-01 100 JLJGGCKB_05697 8.35e-01 100 JLJGGCKB_05704 7.47e-01 100 JLJGGCKB_05714 5.27e-01 100 JLJGGCKB_05738 7.69e-01 100 JLJGGCKB_05744 2.00e-02 100 JLJGGCKB_05766 1.08e-01 100 JLJGGCKB_05777 4.58e-01 100 JLJGGCKB_05787 9.45e-01 100 JLJGGCKB_05795 7.96e-01 100 JLJGGCKB_05870 6.33e-01 100 JLJGGCKB_05880 7.75e-01 100 JLJGGCKB_05910 9.80e-01 100 JLJGGCKB_05912 2.80e-01 100 JLJGGCKB_05929 5.07e-04 23_[+1(2.45e-06)]_48 JLJGGCKB_05941 9.76e-01 100 JLJGGCKB_05951 3.67e-01 100 JLJGGCKB_05977 8.76e-02 100 JLJGGCKB_05980 8.54e-01 100 JLJGGCKB_05984 4.59e-03 58_[+2(1.71e-06)]_27 JLJGGCKB_05996 2.84e-04 46_[+1(1.26e-06)]_25 JLJGGCKB_06033 3.61e-02 61_[+1(8.56e-05)]_10 JLJGGCKB_06037 9.61e-01 100 JLJGGCKB_06041 7.25e-01 100 JLJGGCKB_06049 7.38e-01 100 JLJGGCKB_06083 7.16e-01 100 JLJGGCKB_06086 4.28e-02 100 JLJGGCKB_06091 7.07e-01 100 JLJGGCKB_06104 9.99e-01 100 JLJGGCKB_06118 2.99e-02 22_[+2(8.87e-05)]_63 JLJGGCKB_06174 1.72e-01 100 JLJGGCKB_06175 5.71e-01 100 JLJGGCKB_06176 9.89e-01 100 JLJGGCKB_06177 5.43e-01 100 JLJGGCKB_06178 2.26e-01 100 JLJGGCKB_06179 1.31e-01 100 JLJGGCKB_06180 9.99e-01 100 JLJGGCKB_06181 1.36e-03 13_[+2(2.23e-06)]_72 JLJGGCKB_06182 5.74e-05 5_[+2(4.51e-07)]_80 JLJGGCKB_06183 9.58e-01 100 JLJGGCKB_06184 8.04e-02 100 JLJGGCKB_06185 4.94e-01 100 JLJGGCKB_06186 7.20e-01 100 JLJGGCKB_06187 9.81e-01 100 JLJGGCKB_06188 9.02e-01 100 JLJGGCKB_06189 8.97e-01 100 JLJGGCKB_06190 1.56e-01 100 JLJGGCKB_06191 9.01e-01 100 JLJGGCKB_06192 1.04e-02 100 JLJGGCKB_06193 7.87e-01 100 JLJGGCKB_06194 1.61e-02 53_[+3(8.32e-05)]_2 JLJGGCKB_06195 2.36e-01 100 JLJGGCKB_06196 2.89e-01 100 JLJGGCKB_06197 1.41e-03 38_[+3(4.44e-05)]_17 JLJGGCKB_06198 5.33e-01 100 JLJGGCKB_06199 2.17e-02 100 JLJGGCKB_06200 1.31e-01 100 JLJGGCKB_06201 5.63e-01 100 JLJGGCKB_06202 8.58e-01 100 JLJGGCKB_06203 5.42e-01 100 JLJGGCKB_06204 9.70e-01 100 JLJGGCKB_06206 1.68e-01 100 JLJGGCKB_06207 2.64e-02 100 JLJGGCKB_06208 5.42e-01 100 JLJGGCKB_06209 8.21e-01 100 JLJGGCKB_06210 1.81e-01 100 JLJGGCKB_06211 1.05e-01 100 JLJGGCKB_06219 1.75e-01 100 JLJGGCKB_06223 9.94e-01 100 JLJGGCKB_06305 5.97e-01 100 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: kodomo ********************************************************************************