RMSD of the bases (----- for WC bp, + for isolated bp, x for helix change)

            Strand I                    Strand II          Helix
   1   (0.043) B:.901_:[PSU]P-*---A[..A]:.972_:B (0.002)     |
   2   (0.002) B:.902_:[..U]U-----A[..A]:.971_:B (0.004)     |
   3   (0.004) B:.903_:[..C]C-----G[..G]:.970_:B (0.004)     |
   4   (0.005) B:.904_:[..C]C-----G[..G]:.969_:B (0.004)     |
   5   (0.003) B:.905_:[..U]U-*---G[..G]:.968_:B (0.008)     |
   6   (0.003) B:.906_:[..C]C-----G[..G]:.967_:B (0.011)     |
   7   (0.004) B:.907_:[..G]Gx----C[..C]:.966_:B (0.004)     |
   8   (0.013) B:.949_:[5MC]c-----G[..G]:.965_:B (0.005)     |
   9   (0.004) B:.950_:[..C]C-----G[..G]:.964_:B (0.007)     |
  10   (0.006) B:.951_:[..A]A-----U[..U]:.963_:B (0.005)     |
  11   (0.010) B:.952_:[..G]G-----C[..C]:.962_:B (0.006)     |
  12   (0.010) B:.953_:[..G]G----xC[..C]:.961_:B (0.004)     |
  13   (0.009) B:.954_:[5MU]u-**-xa[1MA]:.958_:B (0.009)     |
  14   (0.044) B:.955_:[PSU]Px**+xG[..G]:.917_:B (0.009)     x
  15   (0.008) B:.939_:[..C]C-----G[..G]:.931_:B (0.010)     |
  16   (0.003) B:.940_:[..C]C-----G[..G]:.930_:B (0.007)     |
  17   (0.006) B:.941_:[..A]A-----U[..U]:.929_:B (0.005)     |
  18   (0.010) B:.942_:[..G]G-----C[..C]:.928_:B (0.004)     |
  19   (0.003) B:.943_:[..A]A-*---P[PSU]:.927_:B (0.044)     |
  20   (0.008) B:.944_:[..A]Ax*---g[M2G]:.926_:B (0.013)     |
  21   (0.007) B:.910_:[2MG]g-----C[..C]:.925_:B (0.008)     |
  22   (0.003) B:.911_:[..C]C-----G[..G]:.924_:B (0.010)     |
  23   (0.004) B:.912_:[..C]C-----G[..G]:.923_:B (0.012)     |
  24   (0.010) B:.913_:[..C]C-*--xC[..C]:.922_:B (0.005)     |
  25   (0.003) B:.914_:[..A]A-**-xU[..U]:.908_:B (0.004)     |
  26   (0.005) B:.915_:[..A]Ax**+xU[..U]:.948_:B (0.006)     x
  27   (0.010) B:.918_:[..G]G-----C[..C]:.956_:B (0.003)     +

Note: This structure contains 9[4] non-Watson-Crick base-pairs.