ID A0A022S1E2_ERYGU Unreviewed; 757 AA. AC A0A022S1E2; DT 11-JUN-2014, integrated into UniProtKB/TrEMBL. DT 11-JUN-2014, sequence version 1. DT 11-MAY-2016, entry version 18. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EYU46592.1}; GN ORFNames=MIMGU_mgv1a001802mg {ECO:0000313|EMBL:EYU46592.1}; OS Erythranthe guttata (Yellow monkey flower) (Mimulus guttatus). OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; OC Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe. OX NCBI_TaxID=4155 {ECO:0000313|EMBL:EYU46592.1, ECO:0000313|Proteomes:UP000030748}; RN [1] {ECO:0000313|EMBL:EYU46592.1, ECO:0000313|Proteomes:UP000030748} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RX PubMed=24225854; DOI=10.1073/pnas.1319032110; RA Hellsten U., Wright K.M., Jenkins J., Shu S., Yuan Y., Wessler S.R., RA Schmutz J., Willis J.H., Rokhsar D.S.; RT "Fine-scale variation in meiotic recombination in Mimulus inferred RT from population shotgun sequencing."; RL Proc. Natl. Acad. Sci. U.S.A. 110:19478-19482(2013). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; KI630171; EYU46592.1; -; Genomic_DNA. DR RefSeq; XP_012832474.1; XM_012977020.1. DR GeneID; 105953351; -. DR Proteomes; UP000030748; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000030748}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000030748}. FT DOMAIN 7 285 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 757 AA; 85955 MW; F5BFA356D509BB8C CRC64; MKFQIEDVTV YFPYDNIYPE QYSYMVELKR ALDAKGHCLL EMPTGTGKTI ALLSLITSYV LSKPSNPVKL LYCTRTVHEM EKTLAELKLL HNYQVKHLGP SARILALGLS SRKNLCVNPS VLSAENRDSV DAGCRKLTAS WVRTMAIENP NIPTCEFFEN YEKAASDAVL PPGVYTLQDL RAFGKAKGWC PYFLARHMVQ FANVVVYSYQ YLLDPKVAGI ISKEMQRECV VVFDEAHNID NVCIEALSVS VRMQTLEGAT RNLNRMSQEI ERLKATDAGR LRAEYNRLVE GLAQRGNLPI SDTWFSNPTL PEDILKEAVP GNIRRAEHFL SVLRRLVQYL RGRLQTENVE KEGPVSFVAS VNAQVGIDQK MLRFCYDRLH SLMLTLEITD TEDFLHIQAV CDMATLVGTY TRGFSIIIEP FDERMPHIPD PVLQLCCHDA SLVIKPVFER FQSVVITSGT LSPIDLYPRL LNFNPVVSRS FTMSLTRDCI CPMVLTRGSD QLPVSTKYEL RNDPGVEKNY GKLLLEMVSV VPDGVVCFFV SYSYMDAIVN SWHESGILKE IMQHKLVFIE TKDVVETTLA LDNYRRACDC GRGAVFFSVA RGKVAEGIDF DRHYGRLVIM FGIPFQYTLS RILLARLEYL RETFQIKEGD FLTFDALRQA AQCVGRVIRS KADYGMMIFA DKRYSRHDKR SKLPGWILSH LRDAHLNLST DMALHIAKEF LRRMAQPYDK TGAVGKKTLL SQEDLEKMVN GAGDMMF // ID A0A023B467_GRENI Unreviewed; 888 AA. AC A0A023B467; DT 11-JUN-2014, integrated into UniProtKB/TrEMBL. DT 11-JUN-2014, sequence version 1. DT 11-MAY-2016, entry version 18. DE SubName: Full=DNA repair helicase {ECO:0000313|EMBL:EZG56010.1}; GN ORFNames=GNI_106410 {ECO:0000313|EMBL:EZG56010.1}; OS Gregarina niphandrodes (Septate eugregarine). OC Eukaryota; Alveolata; Apicomplexa; Conoidasida; Gregarinasina; OC Eugregarinorida; Gregarinidae; Gregarina. OX NCBI_TaxID=110365 {ECO:0000313|EMBL:EZG56010.1, ECO:0000313|Proteomes:UP000019763}; RN [1] {ECO:0000313|EMBL:EZG56010.1, ECO:0000313|Proteomes:UP000019763} RP NUCLEOTIDE SEQUENCE. RA Omoto C.K., Sibley D., Venepally P., Hadjithomas M., Karamycheva S., RA Brunk B., Roos D., Caler E., Lorenzi H.; RL Submitted (DEC-2013) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:EZG56010.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AFNH02000792; EZG56010.1; -; Genomic_DNA. DR RefSeq; XP_011131378.1; XM_011133076.1. DR EnsemblProtists; EZG56010; EZG56010; GNI_106410. DR GeneID; 22913798; -. DR Proteomes; UP000019763; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 3. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 2. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EZG56010.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000019763}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EZG56010.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EZG56010.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EZG56010.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000019763}. FT DOMAIN 8 362 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 888 AA; 101550 MW; C41523130EFDD63D CRC64; MVQFFIDDLE VFFPYDHVYP EQYAYMRQLK ATLDAHGHGV LEMPTGTGKT VALMSLISSY QLEHPEVEKF FFCTRTVAEM EKALIELRGV LRYRLNDLLQ REDRRAERAN VLACALSARR NLCVHPIISR EGDRDKIDES CRQLTAPWVR NSHGENAGDL EEMFQNVNDC RLCPWYEALD SEWNVESMPV DVYTIEDLKN FGSTGKNPIL DEETTNLRRL RAKYDVIRMD DEEESPGRVN TRFCSYFASR RMAQAASVLI LNYQYVLDPR VSQVAFGSSG LMSGKGQVLA NRFAKKDAGE TSRAADPWVI VFDEAHNIDN VCIEALSINL SVLDVEKARV NVRRLQKLIA EKKVHDQQSL RTELEQMIRG TDSGSQITGS QVTGNGGRAT DLTQSVVRNN EYESMLQEHM ASPLLPNEQQ MLVNALVPGN IRKAELFLMN MHVIIVYLDD YIRQFKVVTE GPLSFLKKLE EKTTISSDTL QHFYERLKNL FISLQVTDIR EYMPLTKIAD FCTLVSTYWK GFVLITDPYP EAPGIYDPIT QLCCVDSSLA MKPVLEKFQS VVLTSGTISP LYLYPRLLGF QPVVTQSFPM SLDRKCICPM VVGKGPDQIP LSSAYELRED AAVVRNYGRL LTEFARTVPD GIVCFFTSYQ YMELIISKWY KTGVINELMR YKLLLMETKD IVTTTLALDS YRKCCDNGRG AIFFSVARGK VAEGIDFDRH YGRCVMLFGV PFQYTLSKVL KARLEFMKET YKVPESEFLS FDAMRQAAQC IGRVIRSKTD YGLMVLADYR YGRADKRKKL PEWVLECLDP HHTALSVDVA VQVARDFLIE MSQPYQISMR SRLDFDALQK LHKLTTRIKQ KQDVKNETEQ EAVVKDQPQD IKPATTKL // ID A0A044V179_ONCVO Unreviewed; 754 AA. AC A0A044V179; DT 09-JUL-2014, integrated into UniProtKB/TrEMBL. DT 09-JUL-2014, sequence version 1. DT 11-MAY-2016, entry version 19. DE SubName: Full=Uncharacterized protein {ECO:0000313|EnsemblMetazoa:OVOC8342}; GN Name=WBGene00245151 {ECO:0000313|EnsemblMetazoa:OVOC8342}; OS Onchocerca volvulus. OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Spirurida; OC Filarioidea; Onchocercidae; Onchocerca. OX NCBI_TaxID=6282 {ECO:0000313|EnsemblMetazoa:OVOC8342, ECO:0000313|Proteomes:UP000024404}; RN [1] {ECO:0000313|EnsemblMetazoa:OVOC8342, ECO:0000313|Proteomes:UP000024404} RP NUCLEOTIDE SEQUENCE. RA Cotton J., Tsai J., Stanley E., Tracey A., Holroyd N., Lustigman S., RA Berriman M.; RT "Genome sequencing of Onchocerca volvulus."; RL Submitted (OCT-2013) to the EMBL/GenBank/DDBJ databases. RN [2] {ECO:0000313|EnsemblMetazoa:OVOC8342} RP IDENTIFICATION. RG EnsemblMetazoa; RL Submitted (MAY-2014) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CBVM010000248; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EnsemblMetazoa; OVOC8342; OVOC8342; WBGene00245151. DR OMA; DEVWKYK; -. DR Proteomes; UP000024404; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000024404}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000024404}. FT DOMAIN 1 277 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 754 AA; 86192 MW; B6719CD9D34ED121 CRC64; LEVYFPYDYI YPEQILYMGE LKKTLDAKGH CLLEMPSGTG KTVSLLSLVV AYMLRFPDHL DKLVYCSRTI PEIEKCVEEL RNLFKYYEQC DGKQPSLFAV ALSARKNLCI NESVSSLRQG SLVDGACQKL TASFMRAKRR LHPDLPCCTF FEKLDEQKDM NYPDGVYNLQ NLRKLGQQKG ICPYFMSRNV VDRAHIVVYS YHYILDPKIA ELVSKNFSRH SCVVFDEAHN IDNVCIESMS VSLTKTTIEK ATQKLGVLEQ HVQRLREENS EQLRLEYDRL VEGLKRVEKE RMNDQVLANP VLPDMILKEA VPGTIRNALH FISFLRRFNE YLKHRMRTKT VLIESPVAFL RDINDLMNID RKPLRFCAER FASLTRTLEL ADISDFSSLV LITNFATLVS TYARGFTIVI EPLDEKSGTG HSCTLHLSCM DASVAIRPIF QRYHTVVITS GTLSPLDMYP KILDFDPAVM ASLSMTLARP CIAPLIVSKG NDQVAMTSRF ESREDTAVIR NYGSLVLELV SLVPDGVVVF FTSYVYMENV ISTWYDQGII DELLKYKLMF IETTDALETS IALEKYVEAC DCGRGAVFFS VARGKVSEGI DFSHHLGRAV IMLGVPYVYT ESRILRARLE YLREQLGIRE NDFLTFDAMR QAAQCMGRAL RGKSDYGLMV FADKRFSRKD KMGKLPRWIQ EYITPGNINL SIEEAAIIAR KWFPLMAQSF TKEHQLGISL LTEEMLREKE LLGKKFGHVL EEVD // ID A0A060S235_PYCCI Unreviewed; 792 AA. AC A0A060S235; DT 03-SEP-2014, integrated into UniProtKB/TrEMBL. DT 03-SEP-2014, sequence version 1. DT 11-MAY-2016, entry version 16. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CDO68315.1}; GN ORFNames=BN946_scf184799.g42 {ECO:0000313|EMBL:CDO68315.1}; OS Pycnoporus cinnabarinus (Cinnabar-red polypore) (Trametes OS cinnabarina). OC Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; OC Agaricomycetes; Polyporales; Trametes. OX NCBI_TaxID=5643 {ECO:0000313|EMBL:CDO68315.1, ECO:0000313|Proteomes:UP000029665}; RN [1] {ECO:0000313|EMBL:CDO68315.1, ECO:0000313|Proteomes:UP000029665} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=BRFM137 {ECO:0000313|EMBL:CDO68315.1, RC ECO:0000313|Proteomes:UP000029665}; RA Levasseur A., Lomascolo A., Ruiz-Duenas F.J., Uzan E., Piumi F., RA Kues U., Ram A.F.J., Murat C., Haon M., Benoit I., Arfi Y., RA Chevret D., Drula E., Kwon M.J., Gouret P., Lesage-Meessen L., RA Lombard V., Mariette J., Noirot C., Park J., Patyshakuliyeva A., RA Wieneger R.A.B., Wosten H.A.B., Martin F., Coutinho P.M., de Vries R., RA Martinez A.T., Klopp C., Pontarotti P., Henrissat B., Record E.; RT "The genome of the white-rot fungus Pycnoporus cinnabarinus: a RT basidiomycete model with a versatile arsenal for lignocellulosic RT biomass breakdown."; RL Submitted (JAN-2014) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:CDO68315.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CCBP010000011; CDO68315.1; -; Genomic_DNA. DR EnsemblFungi; CDO68315; CDO68315; BN946_scf184799.g42. DR Proteomes; UP000029665; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 2. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000029665}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000029665}. FT DOMAIN 7 302 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 792 AA; 90118 MW; 38D8530BF6E47FC9 CRC64; MKFFIDDLPI IFPYDRIYPE QYAYMCDLKR TLDASGHCLL EMPSGTGKTV SLLSLIVSYQ QFYPTKRKLI YCSRTVPEIE KALSELKRLM DYRKECAETD EQREKEASFY GIGLTSRKNL CIHPEVSKEK KGKVVDARCR DLTNSAVCQK GRENPGSVEL CDWHENLGKL EPGSLIPPGI WTLADVLQYG RDNRICPYFC VRRMMPFVDV IIYSFHYLLD PKVAEQVSKE LSKDAIVVFD EAHNIALGRI KKTDASKLQD EYMKLVEGLQ EANSDEDAFV SNPVLPEDLL KEAIPGNIRK AEHFVAFLKR FVEYLKTRMR VLHVVAETPL SFLQHLKDIT YIERRPLRFC AERLQSLVRT LELNRIDEYS SLQKVASFAT LVATYEKGFL LILEPFETEN ATVPNPIFHL TCLDPAIAIK PVFERFSSVV ITSGTLSPLD MYPKMLQFTP VVQETYSMTL TRNSFLPLVI TRGSDQVAIS SRFEVRNDPA VVRNFGSILV EYSKIVPDGI VAFFPSYLYM ESIVAAWNDM GILNEVWKHK LIFVETPDAN ETSIALENYR RACDNGRGAI LLSVARGKVS EGIDFDHNYG RAVIMFGVPY QYTESRILKA RLEYLRDAYR IRESEFLGFD AMRNAAQCVG RVLRGKTDWG LMVFADKVWT VSLTVWCAAG GSPSSARACA WHIQRFARAD KRAKLPRWIN QYITETASNL STDMALTLSK QFMRMISQNP NENQTGISLW TLEDIQKAQA KQKEEALAQE AERRDTVMDG DDDEYGDGGL DDDALAAVDL DV // ID A0A066X0I7_COLSU Unreviewed; 716 AA. AC A0A066X0I7; DT 03-SEP-2014, integrated into UniProtKB/TrEMBL. DT 03-SEP-2014, sequence version 1. DT 11-MAY-2016, entry version 16. DE SubName: Full=Putative DNA repair helicase {ECO:0000313|EMBL:KDN62653.1}; GN ORFNames=CSUB01_04851 {ECO:0000313|EMBL:KDN62653.1}; OS Colletotrichum sublineola (Sorghum anthracnose fungus). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; OC Sordariomycetes; Hypocreomycetidae; Glomerellales; Glomerellaceae; OC Colletotrichum. OX NCBI_TaxID=1173701 {ECO:0000313|EMBL:KDN62653.1, ECO:0000313|Proteomes:UP000027238}; RN [1] {ECO:0000313|Proteomes:UP000027238} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=TX430BB {ECO:0000313|Proteomes:UP000027238}; RX PubMed=24926053; DOI=10.1128/genomeA.00540-14; RA Baroncelli R., Sanz-Martin J.M., Rech G.E., Sukno S.A., Thon M.R.; RT "Draft genome sequence of Colletotrichum sublineola, a destructive RT pathogen of cultivated sorghum."; RL Genome Announc. 2:E0054014-E0054014(2014). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:KDN62653.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; JMSE01001315; KDN62653.1; -; Genomic_DNA. DR EnsemblFungi; KDN62653; KDN62653; CSUB01_04851. DR Proteomes; UP000027238; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:KDN62653.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000027238}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:KDN62653.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:KDN62653.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:KDN62653.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000027238}. FT DOMAIN 1 209 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 180 222 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 716 AA; 81847 MW; E9569304D94D8247 CRC64; MSEIEKALAE LKALMKYRAE ELGEEEEFRG LGLTSRKNLC LHPSVKQEKS GAIVDARCRS LTAGFIKEKK ERGESVDVCV YHDNLDLLEP HNLIPNGVWT FDGLLRYGEQ HKQCPYFTAR RMMQFCNVII YSYHYLLDPK IAERVSRELS KDCIVVFDEA HNIDNVCIES LSTDITEDSL RKATRGAQNL ERRIAEMRDT DQEQLQNEYQ KLVEGLRGAD EARQEDAFMA NPALPDDLLK EAVPGNIRRA EHFVSFLKRF IEYLKTRMKV RHTISETPPS FLAHLKEYTF IEKKPLRFCA ERLTSLVRTL ELTNIEDYQP LQEVATFATL VATYEKGFLL ILEPFESETA EVPNPVLHFT CLDAAIAIKP VFDRFSSVII TSGTISPLEM YPKMLGFSTV VQESYSMTLA RRSFLPMIVT RGSDQSSIST SFQVRNEPSV VRNYGTLLTE FAKITPDGMV VFFPSYLYME SIISMWQGMN ILEEVWKYKL ILVETPDAQE TSLALETYRT ACCNGRGAVL LCVARGKVSE GIDFDHQYGR TVLCIGVPFQ YTESRILKAR LEFLRETYRI RENDFLSFDA MRHAAQCLGR VLRGKDDYGI MVLADRRFQK KRGQLPKWIN QGLLDADTNV STDMAVSSAR RFLKQMAQPF RAKDQEGVST WSYEDLMKHK EKMDLERIRE LEEAGAGGDG YGADGGDEYG MDDDLDNDLM EIDDGF // ID A0A067CJL8_SAPPC Unreviewed; 779 AA. AC A0A067CJL8; DT 03-SEP-2014, integrated into UniProtKB/TrEMBL. DT 03-SEP-2014, sequence version 1. DT 11-MAY-2016, entry version 15. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDO29395.1}; GN ORFNames=SPRG_05932 {ECO:0000313|EMBL:KDO29395.1}; OS Saprolegnia parasitica (strain CBS 223.65). OC Eukaryota; Stramenopiles; Oomycetes; Saprolegniales; Saprolegniaceae; OC Saprolegnia. OX NCBI_TaxID=695850 {ECO:0000313|EMBL:KDO29395.1, ECO:0000313|Proteomes:UP000030745}; RN [1] {ECO:0000313|EMBL:KDO29395.1, ECO:0000313|Proteomes:UP000030745} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=CBS 223.65 {ECO:0000313|EMBL:KDO29395.1}; RX PubMed=23785293; RA Jiang R.H., de Bruijn I., Haas B.J., Belmonte R., Lobach L., RA Christie J., van den Ackerveken G., Bottin A., Bulone V., RA Diaz-Moreno S.M., Dumas B., Fan L., Gaulin E., Govers F., RA Grenville-Briggs L.J., Horner N.R., Levin J.Z., Mammella M., RA Meijer H.J., Morris P., Nusbaum C., Oome S., Phillips A.J., RA van Rooyen D., Rzeszutek E., Saraiva M., Secombes C.J., Seidl M.F., RA Snel B., Stassen J.H., Sykes S., Tripathy S., van den Berg H., RA Vega-Arreguin J.C., Wawra S., Young S.K., Zeng Q., RA Dieguez-Uribeondo J., Russ C., Tyler B.M., van West P.; RT "Distinctive expansion of potential virulence genes in the genome of RT the oomycete fish pathogen Saprolegnia parasitica."; RL PLoS Genet. 9:E1003272-E1003272(2013). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; KK583206; KDO29395.1; -; Genomic_DNA. DR RefSeq; XP_012199897.1; XM_012344507.1. DR EnsemblProtists; KDO29395; KDO29395; SPRG_05932. DR GeneID; 24128305; -. DR KEGG; spar:SPRG_05932; -. DR Proteomes; UP000030745; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000030745}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000030745}. FT DOMAIN 7 284 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 779 AA; 87735 MW; BC134B02914D8B48 CRC64; MRLEIEGLEV LFPYPRVYAE QVAYMRELKR ALDAKGHAML EMPTGTGKTV SLLSLVLSYK AAHPQTTGKL IYCTRTVPEM SKCVEEIKHL MKYRQEVLGD ASMGITAVCL SSRRNMCVHS RVMAHADGET VDAQCRNMTA PWVRSQAASR NLETCSFYEQ YDSRSMDQRV LDPGVYTLDD LKAMGTAKGW CPYFMTRHAL TFADVVVYNY QYMLDPKVST MVSRSLERDC IVVFDEAHNI DNVCIEALSV TLNRRGLDRA SRNLTTISTT VSRMKQADKA RLDAEYRRLV EGLRSSGTVV APNAGNNDDT TELGAPVLPN DILEEAIPGS IRRAEHFIAF MRRLIEYLRT RIRVRNVESE TPAAFLHAMQ TAIAVDTKPM KFCYSRLQSL LRTLEITNLE EFNALNQVAD FATLVATYAD GFMLILEPTD QHNAPQPILQ LACLDASLAM RPVFERFSTV VLTSGTLSPI DLYPRLLNFS PVVRESLPMS VYRSCICPLV ITRGSDQMPV STKFDLRDDM SVVRNYGGLL LEMAACVPDG MVCFFPSYMY MENIIAQWDV LGVLKKVLAH KLIFIETKDI VETTLALDNY KRACDIGRGA VFFSVARGKV AEGIDFDRHY GRAVLLFGIP FQYTLSNVLR ARLEYLRYTH HIREGDFLTF DALRQAAQCA GRVIRSKADY GIIVFADSRY NRHDKRSKLP PWINQFLLES HLNLSVDMAV FMSKKYLSLM AQPIEDGPNM HSILLDEAAV AKYLGQHPPS AMLLDGEASE SAAKKARVE // ID A0A067QTE7_ZOONE Unreviewed; 761 AA. AC A0A067QTE7; DT 03-SEP-2014, integrated into UniProtKB/TrEMBL. DT 03-SEP-2014, sequence version 1. DT 11-MAY-2016, entry version 16. DE SubName: Full=TFIIH basal transcription factor complex helicase subunit {ECO:0000313|EMBL:KDR13283.1}; GN ORFNames=L798_12213 {ECO:0000313|EMBL:KDR13283.1}; OS Zootermopsis nevadensis (Dampwood termite). OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; OC Pterygota; Neoptera; Orthopteroidea; Dictyoptera; Isoptera; OC Termopsidae; Zootermopsis. OX NCBI_TaxID=136037 {ECO:0000313|EMBL:KDR13283.1, ECO:0000313|Proteomes:UP000027135}; RN [1] {ECO:0000313|EMBL:KDR13283.1, ECO:0000313|Proteomes:UP000027135} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC TISSUE=Whole organism {ECO:0000313|EMBL:KDR13283.1}; RX PubMed=24845553; DOI=10.1038/ncomms4636; RA Terrapon N., Li C., Robertson H.M., Ji L., Meng X., Booth W., Chen Z., RA Childers C.P., Glastad K.M., Gokhale K., Gowin J., Gronenberg W., RA Hermansen R.A., Hu H., Hunt B.G., Huylmans A.K., Khalil S.M., RA Mitchell R.D., Munoz-Torres M.C., Mustard J.A., Pan H., Reese J.T., RA Scharf M.E., Sun F., Vogel H., Xiao J., Yang W., Yang Z., Yang Z., RA Zhou J., Zhu J., Brent C.S., Elsik C.G., Goodisman M.A., RA Liberles D.A., Roe R.M., Vargo E.L., Vilcinskas A., Wang J., RA Bornberg-Bauer E., Korb J., Zhang G., Liebig J.; RT "Molecular traces of alternative social organization in a termite RT genome."; RL Nat. Commun. 5:3636-3636(2014). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; KK852954; KDR13283.1; -; Genomic_DNA. DR OMA; DEVWKYK; -. DR Proteomes; UP000027135; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:KDR13283.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000027135}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:KDR13283.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:KDR13283.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:KDR13283.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000027135}. FT DOMAIN 7 283 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 256 298 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 761 AA; 86989 MW; BE76A780A37E3DD0 CRC64; MKLSVDGLLV YFPYDYIYPE QFAYMLELKK GLDAKGHCLL EMPSGTGKTV SLLSLIVAYM LANPLSVTKL IYCSRTVPEI EKVIEELKKL ITYYERERGQ KPKMVGLVLS SRKNLCIHPQ VSKERDGKIV DGRCHSLTAS YVRERHNYDD SIPICSFYEG FDIEGREVQL EPGVYSLDDL KEYGQERNWC PYFLARYTIL HANIVVYSYH YLLDPKIADI VSKELSKSSI VVFDEAHNID NVCIDSMSVK INRRIIDKST ASIQILEQTV NEMKEDDAKK LKEEYQRLVE GLRDASVARE TDVVLSNPVL PDEVLKEVVP GSIRTAEHFV GFLKRFVEYL KTRLRVQHVV LESPASFLKD VYQKVCIERK PLRFCHERLA SLLRTLEIAD LTDFSPLILI THLATLVSTY TKGFTIIVEP FDDKTPTVSN PILHFSCLDS SIAIKPVFDR FQTVVITSGT LSPLDMYPKI LDFHPVIMSS FTMTLARPCL LPMIVSKGND QVAISSRFET REDVAVVRNY GQLLVEIATI VPDGVVCFFT SYLYLESVVA SWYDQGVVDS LQRNKLLFIE TQDAAETSLA LLNYIRACES GRGAVLLSVA RGKVSEGVDF DHHLGRAVLM FGIPYVYTQS RILRARLEYL RDQFQIREND FLTFDAMRHA AQCVGRVIRG KTDYGIMIFA DKRFSRSDKR NKLPKWIQEH LKDSLCNLST EEAVQIAKRW LRQMAQPFSR EDQLGVSLLT LEQLQNEEMQ TKQQKAAEQK L // ID A0A068XF63_HYMMI Unreviewed; 783 AA. AC A0A068XF63; DT 01-OCT-2014, integrated into UniProtKB/TrEMBL. DT 17-FEB-2016, sequence version 2. DT 11-MAY-2016, entry version 15. DE SubName: Full=DNA repair helicase rad3:xp d {ECO:0000313|EMBL:CDS28679.2}; GN ORFNames=HmN_000029600 {ECO:0000313|EMBL:CDS28679.2}; OS Hymenolepis microstoma (Rodent tapeworm) (Rodentolepis microstoma). OC Eukaryota; Metazoa; Platyhelminthes; Cestoda; Eucestoda; OC Cyclophyllidea; Hymenolepididae; Hymenolepis. OX NCBI_TaxID=85433 {ECO:0000313|EMBL:CDS28679.2, ECO:0000313|Proteomes:UP000017242}; RN [1] {ECO:0000313|EMBL:CDS28679.2, ECO:0000313|Proteomes:UP000017242} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Nottingham {ECO:0000313|Proteomes:UP000017242}; RX PubMed=23485966; DOI=10.1038/nature12031; RA Tsai I.J., Zarowiecki M., Holroyd N., Garciarrubio A., RA Sanchez-Flores A., Brooks K.L., Tracey A., Bobes R.J., Fragoso G., RA Sciutto E., Aslett M., Beasley H., Bennett H.M., Cai J., Camicia F., RA Clark R., Cucher M., De Silva N., Day T.A., Deplazes P., Estrada K., RA Fernandez C., Holland P.W., Hou J., Hu S., Huckvale T., Hung S.S., RA Kamenetzky L., Keane J.A., Kiss F., Koziol U., Lambert O., Liu K., RA Luo X., Luo Y., Macchiaroli N., Nichol S., Paps J., Parkinson J., RA Pouchkina-Stantcheva N., Riddiford N., Rosenzvit M., Salinas G., RA Wasmuth J.D., Zamanian M., Zheng Y., Taenia solium Genome Consortium, RA Cai X., Olson P.D., Laclette J.P., Brehm K., Berriman M.; RT "The genomes of four tapeworm species reveal adaptations to RT parasitism."; RL Nature 496:57-63(2013). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; LN902934; CDS28679.2; -; Genomic_DNA. DR GeneDB; HmN_000029600.1:pep; -. DR Proteomes; UP000017242; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 2. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CDS28679.2}; KW Complete proteome {ECO:0000313|Proteomes:UP000017242}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:CDS28679.2}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CDS28679.2}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CDS28679.2}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000017242}. FT DOMAIN 7 265 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 783 AA; 87810 MW; A7CA49734B3701CA CRC64; MKINVDGLLV YFPYEYIYPE QYHYMLELKA TLDAKGHGVL EMPSGTGKTT SILSLIVAYI KAHPESVEKF VYCSRTVPEL EKVVGEMKVL DQYYKTETGS SNGCGLLTVA LSSRKNLCIE PSVKKAGDGV ATDTNCRKLT ASFVRRQHRD NEDIPVCSFY ENFDVSGREE ILPTAIYSLL VHAHIVVFSY YYMLDPKIAS LVSSEFPKNT VIVFDEAHNI DNVCIESMSC VISRRSLDRC NQGLEKLASR VAEVKRNDAA KLQGEYNRLV TGLREASVNR ETDVVLANPT LPTEILSQAI PGSLRSADSF ISFLRRLLEY VKLRLRVAHV VHETPVSFLK DCLEKVCIDK RALMHAAERL RSMLDTMEFA DLGIFSGLTL LCNFATLVST YTKGFCVIIE PFDERAQTVV NPILYFHCMD ASFAIQPIFD RYSSVILTSG TLSPLDMYPR ILNFHPVNTA SLTMTLARNC VCPMIVSRGN DQVAMTTKFE SREDLAVTRN YGHLLAEMAS IVPDGIVAFF PSYHYLESTF AMWYEQNLIQ KIQQYKLLFV ETTDSEETGL ALASYQKACE NGRGAILLSV ARGKVSEGID FDHHLGRCVI MFGVPYVYTQ SRIFKARLEY LRDQYNIRPN EFITFDAMRH AAQCLGRAIR GKSDYGIMIL ADKRFARSDK RCKLPSWIQA QLSDAFVNLS TEEAVQACRR FLRVMGSQPF RRDDQLGLAL LTRQDVEAMV KERAANAVIQ KYTNNAAVKG NPGGGLATGL VVPGSQMPPR LTTGMLAPPS QMQ // ID A0A068Y955_ECHMU Unreviewed; 749 AA. AC A0A068Y955; DT 01-OCT-2014, integrated into UniProtKB/TrEMBL. DT 01-OCT-2014, sequence version 1. DT 11-MAY-2016, entry version 14. DE SubName: Full=DNA repair helicase rad3:xp d {ECO:0000313|EMBL:CDS41326.1}; GN ORFNames=EmuJ_000896400 {ECO:0000313|EMBL:CDS41326.1}; OS Echinococcus multilocularis (Fox tapeworm). OC Eukaryota; Metazoa; Platyhelminthes; Cestoda; Eucestoda; OC Cyclophyllidea; Taeniidae; Echinococcus. OX NCBI_TaxID=6211 {ECO:0000313|EMBL:CDS41326.1, ECO:0000313|Proteomes:UP000017246}; RN [1] {ECO:0000313|EMBL:CDS41326.1, ECO:0000313|Proteomes:UP000017246} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Java {ECO:0000313|Proteomes:UP000017246}; RX PubMed=23485966; DOI=10.1038/nature12031; RA Tsai I.J., Zarowiecki M., Holroyd N., Garciarrubio A., RA Sanchez-Flores A., Brooks K.L., Tracey A., Bobes R.J., Fragoso G., RA Sciutto E., Aslett M., Beasley H., Bennett H.M., Cai J., Camicia F., RA Clark R., Cucher M., De Silva N., Day T.A., Deplazes P., Estrada K., RA Fernandez C., Holland P.W., Hou J., Hu S., Huckvale T., Hung S.S., RA Kamenetzky L., Keane J.A., Kiss F., Koziol U., Lambert O., Liu K., RA Luo X., Luo Y., Macchiaroli N., Nichol S., Paps J., Parkinson J., RA Pouchkina-Stantcheva N., Riddiford N., Rosenzvit M., Salinas G., RA Wasmuth J.D., Zamanian M., Zheng Y., Taenia solium Genome Consortium, RA Cai X., Olson P.D., Laclette J.P., Brehm K., Berriman M.; RT "The genomes of four tapeworm species reveal adaptations to RT parasitism."; RL Nature 496:57-63(2013). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; LN902841; CDS41326.1; -; Genomic_DNA. DR GeneDB; EmuJ_000896400.1:pep; -. DR Proteomes; UP000017246; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:InterPro. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CDS41326.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000017246}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:CDS41326.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CDS41326.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CDS41326.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000017246}. SQ SEQUENCE 749 AA; 84308 MW; 0B17340EA6C26C90 CRC64; MPSGTGKTVS ILSLMVAYMK AHPGTVEKFV YCSRTVPELE KVMEEMQVLD KYYAKETGAS GCGLLAVALS ARKNLCIEPS VRRSGDGATV DAACRKLTAS FVRRRRQEDS SVPGCSFFED FDLNGREEVL PTGVYNLSDL RSYGKKRNYC PYFLTRHALL HANIVVYSYY YMLDPKVATY VSNDFPKNTV VVFDEAHNID NVCIESMSCV ISRRALDRCN QGIEKLASRV AEVKRNDAAR LQQEYNRLVQ GLREANAARE TDTVLANPTL PDEIITGAVP GSLRSADSFI SFLRRLLEYV KLRLRVAHVV HETPVAFLKD CLEKVCIDRR PLRSCAERLQ SMLDTLEFAD LGPFSGLTLL CNFGTLVSTY TKGFCVIIEP FDERAPTVVN PILYFHCMDA SFAIHPIFER YTSVILTSGT LSPLDMYPRI LNFHPVNSAS LTMTLARNCI CPMIVSRGSD QVAMTTKFES REDLAVTRNY GHLLVEMSSI VPDGIVAFFP SYHYLESTFA TWYEQNLIQK IQQHKLLFVE TPDNEETSLA LANYQKACEN GRGAILLSVA RGKVSEGIDF DHHLGRCVIM FGVPYVYTQS RIFKARLDYL REQYNIRPNE FITFDAMRHA AQCLGRAIRG KSDYGIMILA DKRYARSDKR CKLPSWIQAQ LSDAYVNLST EEAAQACRRF LRLMGSHPFR QKDQLGLALL TYEHVEALVK ERAEAAVIQH YSNVTTANNS TVPGSHMPKL STALPPTQM // ID A0A072VA92_MEDTR Unreviewed; 759 AA. AC A0A072VA92; DT 01-OCT-2014, integrated into UniProtKB/TrEMBL. DT 01-OCT-2014, sequence version 1. DT 11-MAY-2016, entry version 15. DE SubName: Full=DNA repair helicase (Rad3) {ECO:0000313|EMBL:KEH38939.1}; DE SubName: Full=Uncharacterized protein {ECO:0000313|EnsemblPlants:KEH38939}; GN OrderedLocusNames=MTR_2g084735 {ECO:0000313|EMBL:KEH38939.1}; OS Medicago truncatula (Barrel medic) (Medicago tribuloides). OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; OC Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; OC Trifolieae; Medicago. OX NCBI_TaxID=3880 {ECO:0000313|EMBL:KEH38939.1, ECO:0000313|Proteomes:UP000002051}; RN [1] {ECO:0000313|EMBL:KEH38939.1, ECO:0000313|EnsemblPlants:KEH38939, ECO:0000313|Proteomes:UP000002051} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=A17 {ECO:0000313|EMBL:KEH38939.1}, and RC cv. Jemalong A17 {ECO:0000313|EnsemblPlants:KEH38939, RC ECO:0000313|Proteomes:UP000002051}; RX PubMed=22089132; DOI=10.1038/nature10625; RA Young N.D., Debelle F., Oldroyd G.E.D., Geurts R., Cannon S.B., RA Udvardi M.K., Benedito V.A., Mayer K.F.X., Gouzy J., Schoof H., RA Van de Peer Y., Proost S., Cook D.R., Meyers B.C., Spannagl M., RA Cheung F., De Mita S., Krishnakumar V., Gundlach H., Zhou S., RA Mudge J., Bharti A.K., Murray J.D., Naoumkina M.A., Rosen B., RA Silverstein K.A.T., Tang H., Rombauts S., Zhao P.X., Zhou P., RA Barbe V., Bardou P., Bechner M., Bellec A., Berger A., Berges H., RA Bidwell S., Bisseling T., Choisne N., Couloux A., Denny R., RA Deshpande S., Dai X., Doyle J.J., Dudez A.-M., Farmer A.D., RA Fouteau S., Franken C., Gibelin C., Gish J., Goldstein S., RA Gonzalez A.J., Green P.J., Hallab A., Hartog M., Hua A., RA Humphray S.J., Jeong D.-H., Jing Y., Jocker A., Kenton S.M., RA Kim D.-J., Klee K., Lai H., Lang C., Lin S., Macmil S.L., RA Magdelenat G., Matthews L., McCorrison J., Monaghan E.L., Mun J.-H., RA Najar F.Z., Nicholson C., Noirot C., O'Bleness M., Paule C.R., RA Poulain J., Prion F., Qin B., Qu C., Retzel E.F., Riddle C., RA Sallet E., Samain S., Samson N., Sanders I., Saurat O., Scarpelli C., RA Schiex T., Segurens B., Severin A.J., Sherrier D.J., Shi R., Sims S., RA Singer S.R., Sinharoy S., Sterck L., Viollet A., Wang B.-B., Wang K., RA Wang M., Wang X., Warfsmann J., Weissenbach J., White D.D., RA White J.D., Wiley G.B., Wincker P., Xing Y., Yang L., Yao Z., Ying F., RA Zhai J., Zhou L., Zuber A., Denarie J., Dixon R.A., May G.D., RA Schwartz D.C., Rogers J., Quetier F., Town C.D., Roe B.A.; RT "The Medicago genome provides insight into the evolution of rhizobial RT symbioses."; RL Nature 480:520-524(2011). RN [2] {ECO:0000313|EMBL:KEH38939.1} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=A17 {ECO:0000313|EMBL:KEH38939.1}; RX PubMed=24767513; DOI=10.1186/1471-2164-15-312; RA Tang H., Krishnakumar V., Bidwell S., Rosen B., Chan A., Zhou S., RA Gentzbittel L., Childs K.L., Yandell M., Gundlach H., Mayer K.F., RA Schwartz D.C., Town C.D.; RT "An improved genome release (version Mt4.0) for the model legume RT Medicago truncatula."; RL BMC Genomics 15:312-312(2014). RN [3] {ECO:0000313|EnsemblPlants:KEH38939} RP IDENTIFICATION. RC STRAIN=cv. Jemalong A17 {ECO:0000313|EnsemblPlants:KEH38939}; RG EnsemblPlants; RL Submitted (APR-2015) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CM001218; KEH38939.1; -; Genomic_DNA. DR RefSeq; XP_013464904.1; XM_013609450.1. DR EnsemblPlants; KEH38939; KEH38939; MTR_2g084735. DR GeneID; 25487506; -. DR Gramene; KEH38939; KEH38939; MTR_2g084735. DR Proteomes; UP000002051; Chromosome 2. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:KEH38939.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000002051}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:KEH38939.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:KEH38939.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:KEH38939.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000002051}. FT DOMAIN 7 285 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 759 AA; 86199 MW; 1DE1D28964A80C15 CRC64; MKFKIEEVTV YFPYDNIYPE QYAYMIELKR TLDAKGHCLL EMPTGTGKTI ALLSLITSYT LSKPQSPIKL IYCTRTVHEM EKTLAELRLL HDYMVKCIGP SAKMLALGLS SRKNLCVNNK VLAAENRDSV DAGCRKLTAS WVRALAAENP DVPSCEFFEQ YERAGSAAVL PPGVYTLQDL RTFGKEKGWC PYFLARHMVQ FANVVVYSYQ YLLDPKVAAI ISKEMQKESV VVFDEAHNID NVCIEALSVS VRRQTVDGAR RNINRMRQEI DKFKATDAGR LRAEYNRLVE GLALRGDLPA ADGWLANPAL PDDILKEAVP GNIRKAEHFI QVLRRLVQYL EGRLETENVE KENPVSFVFS ILNHAGIDQK TLKFCYDRLH SLMMTLEITD TDEFLHVQTI CDFATLVGTY ARGFSIIIEP FDERMPHIPD PVLQLCCHDA SLAIKPVFER FQSVVITSGT LSPIDLYPRL LNFNPVVSRS FTMSLTRDCI CPMVLTRGSD QLPVSTKFDM RSDLGVVRNY GRLLLEMASV VPDGIVCFFV SYSYMDGIVN SWNENGILKE IMQHKLVFIE TQDVVETTLA LDNYRKACDC GRGAIFFSVA RGKVAEGIDF DRHYGRLVIM FGVPFQYTLS KILLARLEYL RETFQIKEGD FLTFDALRQA AQCVGRVIRS KADYGMMIFA DKRYSRHDKR SKLPGWILSH LRDAHLNLST DMALHIAREF LRKMAQPYDK TGGTGKKTLL SQEDLDKIVL EGSMNDMLY // ID A0A072VC04_MEDTR Unreviewed; 845 AA. AC A0A072VC04; DT 01-OCT-2014, integrated into UniProtKB/TrEMBL. DT 01-OCT-2014, sequence version 1. DT 11-MAY-2016, entry version 15. DE SubName: Full=DNA repair helicase (Rad3) {ECO:0000313|EMBL:KEH38938.1}; DE SubName: Full=Uncharacterized protein {ECO:0000313|EnsemblPlants:KEH38938}; GN OrderedLocusNames=MTR_2g084735 {ECO:0000313|EMBL:KEH38938.1}; OS Medicago truncatula (Barrel medic) (Medicago tribuloides). OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; OC Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; OC Trifolieae; Medicago. OX NCBI_TaxID=3880 {ECO:0000313|EMBL:KEH38938.1, ECO:0000313|Proteomes:UP000002051}; RN [1] {ECO:0000313|EMBL:KEH38938.1, ECO:0000313|EnsemblPlants:KEH38938, ECO:0000313|Proteomes:UP000002051} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=A17 {ECO:0000313|EMBL:KEH38938.1}, and RC cv. Jemalong A17 {ECO:0000313|EnsemblPlants:KEH38938, RC ECO:0000313|Proteomes:UP000002051}; RX PubMed=22089132; DOI=10.1038/nature10625; RA Young N.D., Debelle F., Oldroyd G.E.D., Geurts R., Cannon S.B., RA Udvardi M.K., Benedito V.A., Mayer K.F.X., Gouzy J., Schoof H., RA Van de Peer Y., Proost S., Cook D.R., Meyers B.C., Spannagl M., RA Cheung F., De Mita S., Krishnakumar V., Gundlach H., Zhou S., RA Mudge J., Bharti A.K., Murray J.D., Naoumkina M.A., Rosen B., RA Silverstein K.A.T., Tang H., Rombauts S., Zhao P.X., Zhou P., RA Barbe V., Bardou P., Bechner M., Bellec A., Berger A., Berges H., RA Bidwell S., Bisseling T., Choisne N., Couloux A., Denny R., RA Deshpande S., Dai X., Doyle J.J., Dudez A.-M., Farmer A.D., RA Fouteau S., Franken C., Gibelin C., Gish J., Goldstein S., RA Gonzalez A.J., Green P.J., Hallab A., Hartog M., Hua A., RA Humphray S.J., Jeong D.-H., Jing Y., Jocker A., Kenton S.M., RA Kim D.-J., Klee K., Lai H., Lang C., Lin S., Macmil S.L., RA Magdelenat G., Matthews L., McCorrison J., Monaghan E.L., Mun J.-H., RA Najar F.Z., Nicholson C., Noirot C., O'Bleness M., Paule C.R., RA Poulain J., Prion F., Qin B., Qu C., Retzel E.F., Riddle C., RA Sallet E., Samain S., Samson N., Sanders I., Saurat O., Scarpelli C., RA Schiex T., Segurens B., Severin A.J., Sherrier D.J., Shi R., Sims S., RA Singer S.R., Sinharoy S., Sterck L., Viollet A., Wang B.-B., Wang K., RA Wang M., Wang X., Warfsmann J., Weissenbach J., White D.D., RA White J.D., Wiley G.B., Wincker P., Xing Y., Yang L., Yao Z., Ying F., RA Zhai J., Zhou L., Zuber A., Denarie J., Dixon R.A., May G.D., RA Schwartz D.C., Rogers J., Quetier F., Town C.D., Roe B.A.; RT "The Medicago genome provides insight into the evolution of rhizobial RT symbioses."; RL Nature 480:520-524(2011). RN [2] {ECO:0000313|EMBL:KEH38938.1} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=A17 {ECO:0000313|EMBL:KEH38938.1}; RX PubMed=24767513; DOI=10.1186/1471-2164-15-312; RA Tang H., Krishnakumar V., Bidwell S., Rosen B., Chan A., Zhou S., RA Gentzbittel L., Childs K.L., Yandell M., Gundlach H., Mayer K.F., RA Schwartz D.C., Town C.D.; RT "An improved genome release (version Mt4.0) for the model legume RT Medicago truncatula."; RL BMC Genomics 15:312-312(2014). RN [3] {ECO:0000313|EnsemblPlants:KEH38938} RP IDENTIFICATION. RC STRAIN=cv. Jemalong A17 {ECO:0000313|EnsemblPlants:KEH38938}; RG EnsemblPlants; RL Submitted (APR-2015) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CM001218; KEH38938.1; -; Genomic_DNA. DR RefSeq; XP_013464903.1; XM_013609449.1. DR EnsemblPlants; KEH38938; KEH38938; MTR_2g084735. DR GeneID; 25487506; -. DR Gramene; KEH38938; KEH38938; MTR_2g084735. DR Proteomes; UP000002051; Chromosome 2. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0000724; P:double-strand break repair via homologous recombination; IEA:EnsemblPlants. DR GO; GO:0010286; P:heat acclimation; IEA:EnsemblPlants. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR GO; GO:0045893; P:positive regulation of transcription, DNA-templated; IEA:EnsemblPlants. DR GO; GO:0043687; P:post-translational protein modification; IEA:EnsemblPlants. DR GO; GO:0006457; P:protein folding; IEA:EnsemblPlants. DR GO; GO:0009644; P:response to high light intensity; IEA:EnsemblPlants. DR GO; GO:0042542; P:response to hydrogen peroxide; IEA:EnsemblPlants. DR GO; GO:0010212; P:response to ionizing radiation; IEA:EnsemblPlants. DR GO; GO:0009411; P:response to UV; IEA:EnsemblPlants. DR GO; GO:0000394; P:RNA splicing, via endonucleolytic cleavage and ligation; IEA:EnsemblPlants. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:EnsemblPlants. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:KEH38938.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000002051}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:KEH38938.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:KEH38938.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:KEH38938.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000002051}. FT DOMAIN 93 371 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 845 AA; 96260 MW; 021BAAE260DFD190 CRC64; MGTNVGNVVI AKATDSTLWK SLLWRIIEEL YPSNKISFHV VEYFMDSKVM TIAIYGKRLT QKSQFIMRIV VDTYALAERH KRRNKKMKFK IEEVTVYFPY DNIYPEQYAY MIELKRTLDA KGHCLLEMPT GTGKTIALLS LITSYTLSKP QSPIKLIYCT RTVHEMEKTL AELRLLHDYM VKCIGPSAKM LALGLSSRKN LCVNNKVLAA ENRDSVDAGC RKLTASWVRA LAAENPDVPS CEFFEQYERA GSAAVLPPGV YTLQDLRTFG KEKGWCPYFL ARHMVQFANV VVYSYQYLLD PKVAAIISKE MQKESVVVFD EAHNIDNVCI EALSVSVRRQ TVDGARRNIN RMRQEIDKFK ATDAGRLRAE YNRLVEGLAL RGDLPAADGW LANPALPDDI LKEAVPGNIR KAEHFIQVLR RLVQYLEGRL ETENVEKENP VSFVFSILNH AGIDQKTLKF CYDRLHSLMM TLEITDTDEF LHVQTICDFA TLVGTYARGF SIIIEPFDER MPHIPDPVLQ LCCHDASLAI KPVFERFQSV VITSGTLSPI DLYPRLLNFN PVVSRSFTMS LTRDCICPMV LTRGSDQLPV STKFDMRSDL GVVRNYGRLL LEMASVVPDG IVCFFVSYSY MDGIVNSWNE NGILKEIMQH KLVFIETQDV VETTLALDNY RKACDCGRGA IFFSVARGKV AEGIDFDRHY GRLVIMFGVP FQYTLSKILL ARLEYLRETF QIKEGDFLTF DALRQAAQCV GRVIRSKADY GMMIFADKRY SRHDKRSKLP GWILSHLRDA HLNLSTDMAL HIAREFLRKM AQPYDKTGGT GKKTLLSQED LDKIVLEGSM NDMLY // ID A0A075K7H1_9FIRM Unreviewed; 778 AA. AC A0A075K7H1; DT 29-OCT-2014, integrated into UniProtKB/TrEMBL. DT 29-OCT-2014, sequence version 1. DT 09-DEC-2015, entry version 9. DE SubName: Full=Helicase c2 {ECO:0000313|EMBL:AIF50211.1}; GN ORFNames=UFO1_0656 {ECO:0000313|EMBL:AIF50211.1}; OS Pelosinus sp. UFO1. OC Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; OC Pelosinus. OX NCBI_TaxID=484770 {ECO:0000313|EMBL:AIF50211.1, ECO:0000313|Proteomes:UP000027983}; RN [1] {ECO:0000313|EMBL:AIF50211.1, ECO:0000313|Proteomes:UP000027983} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=UFO1 {ECO:0000313|EMBL:AIF50211.1}; RX PubMed=25189589; RA Brown S.D., Utturkar S.M., Magnuson T.S., Ray A.E., Poole F.L., RA Lancaster W.A., Thorgersen M.P., Adams M.W., Elias D.A.; RT "Complete Genome Sequence of Pelosinus sp. Strain UFO1 Assembled Using RT Single-Molecule Real-Time DNA Sequencing Technology."; RL Genome Announc. 2:e00881-14(2014). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP008852; AIF50211.1; -; Genomic_DNA. DR RefSeq; WP_038667926.1; NZ_CP008852.1. DR EnsemblBacteria; AIF50211; AIF50211; UFO1_0656. DR KEGG; puf:UFO1_0656; -. DR Proteomes; UP000027983; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 4. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF00270; DEAD; 1. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000313|EMBL:AIF50211.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000027983}; KW Helicase {ECO:0000313|EMBL:AIF50211.1}; KW Hydrolase {ECO:0000313|EMBL:AIF50211.1}; KW Nucleotide-binding {ECO:0000313|EMBL:AIF50211.1}; KW Reference proteome {ECO:0000313|Proteomes:UP000027983}. FT DOMAIN 182 443 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 778 AA; 89913 MW; E9CF3D192E61063D CRC64; MTPDVVHLSV KNLVEYTLRS GDIDTRFVGT SRAVEGTKIH QKLQKAGGDK YLAEAQLKYE IRYKEFLFLI EGRADGIIIE DQQVVIDEIK TTAVPLERID ENFNPLHWAQ AKCYGLIYGE QNNVEQLEIQ LTYYNIDTDE IKRLRETVTM QELQTFFYGL LDSYLVWAKH LKEWNMLRDS SIKKLKFPFA TYRQGQRELA VTVYKTISDN KKMFIQAPTG IGKTISTLFP AVKAIGENKT SKIFYLTAKT ITRQVAEEAV NAMRGCGLAF KSITITAKDK ICFKEKAICN PDHCEYAKGH FDRVNDAIID LFVKERAFTR EVIEAYSRKY MVCPFELSLD LSMWADCIIC DYNYVFDPRV YLKRFFQTSQ GDYTFLIDEA HNLVDRAREM FSAELTKSSF LKLKNIYKGH SIGKTLGKIN TVMLGMRKEC SEEGYYTQLH QPEEVYPLLW TFVNKAPALL TDNSKTEGYD ALLELYFNVL IFLKMVEFYD DHYITYVEKS SSEVTLKLFC LDPSKLLGEA VKRGKSSVFF SATLAPLDYF CEILGGEAMD AKIAFPSPFK TENLCLLVAD QISTKFKNRE SSYDEIAQYI HLAIQQKTGN YLIFFPSYHY MQEVHHVFSQ LHPDTETIVQ TNIMSEEERE SFLDRFQPNR NRMLVGFCVL GGIFSEGIDL KGDKLLGTVI IGVGLPQICI ERNLIMEHFK KKNQLGYEYA YMYPGMNKVL QAAGRVIRSE DDKGVVLLID ARFSNYYYKK LFPAHWRYPR EVRNGSKLNA LIQEFWDK // ID A0A077ZCK2_TRITR Unreviewed; 717 AA. AC A0A077ZCK2; DT 29-OCT-2014, integrated into UniProtKB/TrEMBL. DT 29-OCT-2014, sequence version 1. DT 11-MAY-2016, entry version 13. DE SubName: Full=TFIIH basal transcription factor complex {ECO:0000313|EMBL:CDW57263.1}; GN ORFNames=TTRE_0000555401 {ECO:0000313|EMBL:CDW57263.1}; OS Trichuris trichiura (Whipworm) (Trichocephalus trichiurus). OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia; OC Trichocephalida; Trichuridae; Trichuris. OX NCBI_TaxID=36087 {ECO:0000313|EMBL:CDW57263.1, ECO:0000313|Proteomes:UP000030665}; RN [1] {ECO:0000313|EMBL:CDW57263.1, ECO:0000313|Proteomes:UP000030665} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RA Foth B.J., Tsai I.J., Reid A.J., Bancroft A.J., Nichol S., Tracey A., RA Holroyd N., Cotton J.A., Stanley E.J., Zarowiecki M., Liu J.Z., RA Huckvale T., Cooper P.J., Grencis R.K., Berriman M.; RT "The whipworm genome and dual-species transcriptomics of an intimate RT host-pathogen interaction."; RL Submitted (MAR-2014) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; HG806142; CDW57263.1; -; Genomic_DNA. DR Proteomes; UP000030665; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 2. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000030665}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000030665}. FT DOMAIN 1 246 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 215 254 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 717 AA; 81756 MW; E7C2B649815B12C1 CRC64; MPSGTGKTAS LLSLVIAYQK AYPSQLEKLV YCSRTIPEIS KVVEELKLLC RYYEEETGES AGILGVALSA RKNLCIHPEV SKLRQGKLVD GQCLSLTSSF VRAKRIEDPS VPCCGYFEDF FNDGTESVLP CGVYNLQDLK EYGKKKHWCP YFVARHAIMR ANVVIYSYHY LLDPKIAELV SKDLSRHSVI VFDEAHNIDN VCIEALTVTL KKNTLEKCHE NLNSLQKHID EENVKQLELE YERLVQGLKE ARKLRENDQI LGNPVLPDDV LQESVPGSIR TADHFLAFMK RFAHYVKHRM KSTTLTVENP ASFLHDISVR MAIDRKPLRF CAERLSSLLR TLELADTSEF WPLILLSHFA TLVSTYSKGF SLLFEPYEDK LPTMPNPVLT FSCMDPSIAI RPVFHRFQSV LITSGTLSPL DMYPKMLDFD PAVMASFSMT LARPCLLPLI VSKGNDQIAI TTKFEDRDDA SVMRNYGTLL LEMSAVIPDG IVCFFTSYLY MENTVAFWYK QGMVDRIMKN KLLFIETKDS VETALALHNY AKACESGRGA VLLSVARGKV SEGVDFSYHL AVIMMGVPYI YTESRIIRAR LEYLRDQFNI RENDFLTFDA MRQAAQCVGR SLRSKADYGL MIFADKRYSR NDKRDKLPRW IQDHLQNGNS NLSIEEAVQL SKRWLKLMAQ PFRQEDQLGI SLLTAEQISN EKTRRKLAQH ACDMEVT // ID A0A087GZK2_ARAAL Unreviewed; 760 AA. AC A0A087GZK2; DT 29-OCT-2014, integrated into UniProtKB/TrEMBL. DT 29-OCT-2014, sequence version 1. DT 11-MAY-2016, entry version 13. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KFK35304.1}; GN ORFNames=AALP_AA5G267300 {ECO:0000313|EMBL:KFK35304.1}; OS Arabis alpina (Alpine rock-cress). OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; OC Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; OC Arabis. OX NCBI_TaxID=50452 {ECO:0000313|EMBL:KFK35304.1, ECO:0000313|Proteomes:UP000029120}; RN [1] {ECO:0000313|EMBL:KFK35304.1, ECO:0000313|Proteomes:UP000029120} RP NUCLEOTIDE SEQUENCE. RC STRAIN=cv. Pajares {ECO:0000313|Proteomes:UP000029120}; RC TISSUE=Leaf {ECO:0000313|EMBL:KFK35304.1}; RA Willing E.-M.; RT "The reference genome of Arabis alpina."; RL Submitted (JUN-2014) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CM002873; KFK35304.1; -; Genomic_DNA. DR Proteomes; UP000029120; Chromosome 5. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000029120}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000029120}. FT DOMAIN 12 290 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 760 AA; 86519 MW; DC9F42439DAE94B9 CRC64; MRKKKMIFKI EDVTVYFPYE NIYPEQYEYM IELKRTLDAK GHCLLEMPTG TGKTIALLSL ITSYRLSRPD SPIKLVYCTR TVHEMEKTLA ELKVLHDYQV SQLGAQAKIL AIGLSSRKNL CVNPKVLAAE NRDSVDAACR KRTASWVRDM AVENKNVELC DYFENHEKAG ENALLPPGVY TLEDLRTFGK NRGWCPYFLA RHMVQFANVI VYSYQYLLDP KVAGIISKEL QKESVVVFDE AHNIDNVCIE ALSVSVRRVT LEGANRNLNK IRQEIDRFKA TDAGRLRAEY NRLVEGLALR GDLSGTDQWL ANPALPHDIL KEAVPGNIRR AEHFVHVLRR LLQYLGGRLD TENVEKESPV SFVSSLNSQA GIEQKTLKFC YDRLHSLHVN PLKLQIQMNL CLFRQCATLQ LLLGHMQGAF PSSLSLTTKE CLIFQILYCS CHDASLAIKP VFDRFQSVVI TSGTLSPIDL YPRLLSFNPV VSRSFKMSMT RDCICPMVLT RGSDQLPVST KFDMRSDPGV VRNYGKLLVE MVSIVPDGVV CFFVSYSYMD GIIATWSETG ILKEIMQQKL VFIETQDVVE TTLALDNYRR ACDRGRGAVF FSVARGKVAE GIDFDRHYGR LVVMYGVPFQ YTLSKILLAR LEYLRDTFQI KEGDFLTFDA LRQAAQCVGR VIRSKADYGM MIFADKRYSR HDKRSKLPGW ILSHLRDNLS TDMAIHIARE FLRKMAQPYD KAGTTMGKKT LLTQEDLDKM AETGVQDMVY // ID A0A087SFH7_AUXPR Unreviewed; 782 AA. AC A0A087SFH7; DT 29-OCT-2014, integrated into UniProtKB/TrEMBL. DT 29-OCT-2014, sequence version 1. DT 11-MAY-2016, entry version 13. DE SubName: Full=DNA repair helicase UVH6 {ECO:0000313|EMBL:KFM24481.1}; GN ORFNames=F751_3199 {ECO:0000313|EMBL:KFM24481.1}; OS Auxenochlorella protothecoides (Green microalga) (Chlorella OS protothecoides). OC Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; OC Chlorellaceae; Auxenochlorella. OX NCBI_TaxID=3075 {ECO:0000313|EMBL:KFM24481.1, ECO:0000313|Proteomes:UP000028924}; RN [1] {ECO:0000313|EMBL:KFM24481.1, ECO:0000313|Proteomes:UP000028924} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=0710 {ECO:0000313|EMBL:KFM24481.1}; RX PubMed=25012212; RA Gao C., Wang Y., Shen Y., Yan D., He X., Dai J., Wu Q.; RT "Oil accumulation mechanisms of the oleaginous microalga Chlorella RT protothecoides revealed through its genome, transcriptomes, and RT proteomes."; RL BMC Genomics 15:582-582(2014). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; KL662107; KFM24481.1; -; Genomic_DNA. DR RefSeq; XP_011397369.1; XM_011399067.1. DR GeneID; 23614590; -. DR KEGG; apro:F751_3199; -. DR KO; K10844; -. DR Proteomes; UP000028924; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR006935; Helicase/UvrB_N. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR Pfam; PF04851; ResIII; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:KFM24481.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000028924}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:KFM24481.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:KFM24481.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:KFM24481.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000028924}. FT DOMAIN 7 306 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 782 AA; 87268 MW; 5A6F94166E93A57A CRC64; MRFLLEGLTV YFPYEYIYPE QYKYMLELKH ALDAKGHCLL EMPTGTGKTI TLLSLITSYQ LAHPETGKLI YCTRTVPEME KVLAEVKDLI EYRSRYFTDA PAPKLLALGL SSRKNLCIHP RVAEEGSRES VDARCMRLTA SWVRERARGA ARPGAETTDA GAAAAVPAAV PDIELCEFFE GLEGAGADGR LDAGVYTMHD LRALGRKRRW CPYFLARHMV AYANVVVWNY QYLLDPKVAA MVSREMEREC IVVFDEAHNI DNVCIEALSV ELRQQGLDAA GRNVARLRSE IERVKSTDAD RLKREYQRLV QGLASQGALR GGGESEQWLA NPALPADILQ EAVPGNIRRA EHFLAFLQRF LSFLRTRLNV NQVVSDTPTS FLTHLQSVVA IEGKTLRFCY DRLTSLMKTL EISATDDFGP IHRVADFATL VGTYTKGFAI IVEPYDERMP GVPDPVIQLA CLDASLAIKP VFAKFQSVVI TSGTLSPIDL YPRILDFKPV CLASLAMTLT RQCLCPVVLT RGGDQLPVST KFDMRDDPAV TRNYGRMLLD LAAVVPDGII CFFVSYSYMD SIVSRWNDMG ILSALMTHKL VFIETVDVVE TTLALDNYRR ACDCGRGAIF FSVARGKVAE GIDFDRHYGR CVVMFGVPYQ YTLGRILRAR LEYLRETFQI KESDFLAFDA VRQAAQCVGR VIRSKADYGL MVFADKRYQR HDKRDKLPGW ISSQLRDAHL NLSTDMLLCI AREFMRAMAQ PFDGGSAEGA SLLSEAAVNA LDTAGAGPMV LG // ID A0A087YGP0_POEFO Unreviewed; 760 AA. AC A0A087YGP0; DT 29-OCT-2014, integrated into UniProtKB/TrEMBL. DT 29-OCT-2014, sequence version 1. DT 11-MAY-2016, entry version 13. DE SubName: Full=Uncharacterized protein {ECO:0000313|Ensembl:ENSPFOP00000017193}; OS Poecilia formosa (Amazon molly) (Limia formosa). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; OC Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; OC Poeciliinae; Poecilia. OX NCBI_TaxID=48698 {ECO:0000313|Ensembl:ENSPFOP00000017193, ECO:0000313|Proteomes:UP000028760}; RN [1] {ECO:0000313|Ensembl:ENSPFOP00000017193, ECO:0000313|Proteomes:UP000028760} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RA Schartl M., Warren W.; RL Submitted (OCT-2013) to the EMBL/GenBank/DDBJ databases. RN [2] {ECO:0000313|Ensembl:ENSPFOP00000017193} RP IDENTIFICATION. RG Ensembl; RL Submitted (SEP-2014) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an Ensembl CC automatic analysis pipeline and should be considered as CC preliminary data. {ECO:0000313|Ensembl:ENSPFOP00000017193}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AYCK01004929; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AYCK01004930; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR Ensembl; ENSPFOT00000017215; ENSPFOP00000017193; ENSPFOG00000017021. DR GeneTree; ENSGT00550000075092; -. DR OMA; DEVWKYK; -. DR Proteomes; UP000028760; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000028760}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000028760}. FT DOMAIN 7 285 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 249 276 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 760 AA; 86888 MW; 33CF6885788B6CC4 CRC64; MKLNIEGLLV YFPYDYIYPE QYSYMLELKR TLDAKGHGVL EMPSGTGKTI SLLSLIVAYQ RAFPLDVTKL IYCSRTVPEI EKVVEELRKL MEFYAKETGE ANNFLALSLS SRKNLCIHPE VSSLRFGKEV DGKCHSLTAS YIRAQRHSNP NLPVCRFYEE FDAVGRQVPL PAGIYNLDDL KDFGRRKGWC PYYLARYAIL HANIVVYSYH YLLDPKIADL VSKELAKKSV VVFDEAHNID NVCIDSMSVN ITRRTLDRCQ NNVDTLQNTI HKIKETDAAK LREEYRRLVE GLKEANVARE TDIYLANPVL PDEVLQEAVP GSIRTAEHFV GFLRRFLEYL KARLRVQHVV QESAPQFLKD IFDKVCIDRK PLRFCAERLQ SLLRTLEIAD IADFSAVTLI SNFATLVSTY SKGFTIIIEP FEDRTPTIAN PVLHFSCMDP SIAIKPVFQR FQSVVITSGT LSPLDIYPRI LDFRPVTMAS FTMTLARTCL CPLIVGRGND QVALSSKFET REDFAVIRNY GNLLLEMSAV VPDGIVAFFT SYVYMENIVA SWYEQGILEN IQKNKLIFIE TQDAAETSMA LEKYQEACEN GRGAILLSVA RGKVSEGIDF VHHFGRAVIM FGVPYVYTQS RILKARLEYL RDQFQIREND FLTFDAMRHA AQCVGRAIRG KTDYGLMIFA DKRYARSDKR GKLPRWIQEH INDGSLNLTV DEAVQLSKHF LRQMAQPFRQ EDQLGLSLLT LEQLQSEEML QKISQMAHQT // ID A0A088AL99_APIME Unreviewed; 759 AA. AC A0A088AL99; DT 29-OCT-2014, integrated into UniProtKB/TrEMBL. DT 29-OCT-2014, sequence version 1. DT 11-MAY-2016, entry version 16. DE SubName: Full=Uncharacterized protein {ECO:0000313|EnsemblMetazoa:GB52349-PA}; GN Name=Xpd {ECO:0000313|EnsemblMetazoa:GB52349-PA}; OS Apis mellifera (Honeybee). OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; OC Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; OC Apoidea; Apidae; Apis. OX NCBI_TaxID=7460 {ECO:0000313|EnsemblMetazoa:GB52349-PA, ECO:0000313|Proteomes:UP000005203}; RN [1] {ECO:0000313|Proteomes:UP000005203} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=DH4 {ECO:0000313|Proteomes:UP000005203}; RG Human Genome Sequencing Center; RL Submitted (DEC-2003) to the EMBL/GenBank/DDBJ databases. RN [2] {ECO:0000313|Proteomes:UP000005203} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=DH4 {ECO:0000313|Proteomes:UP000005203}; RA Wu J.L., Liu J.H., Yuan Y.N., Qiao L.Y., Liu W.Z.; RL Submitted (NOV-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR RefSeq; XP_396155.4; XM_396155.5. DR STRING; 7460.GB11332-PA; -. DR PaxDb; A0A088AL99; -. DR EnsemblMetazoa; GB52349-RA; GB52349-PA; GB52349. DR GeneID; 412700; -. DR KEGG; ame:412700; -. DR CTD; 37414; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR PhylomeDB; A0A088AL99; -. DR Proteomes; UP000005203; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 2. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000005203}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000005203}. FT DOMAIN 7 291 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 77 100 {ECO:0000256|SAM:Coils}. FT COILED 256 295 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 759 AA; 87173 MW; 6539B53EE17315B2 CRC64; MKISVDGLLV YFPYDYIYPE QYAYMLELKR GLDAKGHCLL EMPSGTGKTI TLLSLIVAYM LENPLDVTKL IYCSRTVPEI EKVIEELKKL MDYYEKETDN KPKIVGLVLS SRKNMCIHPE VSREREGKIV DGRCHSLTAS YVRERHNYDD STPICNFYEG FDMEGKEQIM PSGIYSIDDL KEYGKDRNWC PYFLARFTIL HAQIVVYSYH YLLDPKIAET VSRELSKSSV VIFDEAHNID NVCIDSMSVK INRRTLEKSS ANIQLLEKTV AEMREDDVNK LKEEYERLVE GLKDAHVARE TDIILANPVL PNEVLQEVVP GNIRNAEHFV SFLKRFVEYL KTRLRVQHVV QESPAAFLRD VQTKVSIERK PLRFCAERLA SLLRTMEITD LTDFSPIILV THLATLVSTY TKGFTIIVEP FDDKTPNVLN PILHFVCLDS SIAMKPIFDR FQSVVITSGT LSPLDMYPKI LNFHPVIMSS FTMTLARPCL LPMIVAKGND QVAISSKYET REDVAVIRNY GQLLVEFAAT VPDGLVCFFT SYLYMESVVA AWYDQGVVDQ LQRHKLLFIE TQDSAETSLA LINYIKACEN GRGAVLLSVA RGKVSEGVDF DHHLGRAVLM FGIPYVYTQS RILKARLEYL RDQFQIREND FLTFDAMRHA AQCVGRAIRG KTDYGIMIFA DKRFSRIDKR SKLPKWIQEH LTDSLCNLST EEAVQISKRW LRQMAQPFTR ENQLGLSLLT REQLEKEEYG KIKQKAQQN // ID A0A090MB65_OSTTA Unreviewed; 797 AA. AC A0A090MB65; DT 26-NOV-2014, integrated into UniProtKB/TrEMBL. DT 26-NOV-2014, sequence version 1. DT 11-MAY-2016, entry version 13. DE SubName: Full=P-loop containing nucleoside triphosphate hydrolase {ECO:0000313|EMBL:CEF99977.1}; GN ORFNames=OT_ostta12g02900 {ECO:0000313|EMBL:CEF99977.1}; OS Ostreococcus tauri. OC Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; OC Mamiellales; Bathycoccaceae; Ostreococcus. OX NCBI_TaxID=70448 {ECO:0000313|EMBL:CEF99977.1, ECO:0000313|Proteomes:UP000009170}; RN [1] {ECO:0000313|Proteomes:UP000009170} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=OTTH0595 {ECO:0000313|Proteomes:UP000009170}; RX PubMed=16868079; DOI=10.1073/pnas.0604795103; RA Derelle E., Ferraz C., Rombauts S., Rouze P., Worden A.Z., Robbens S., RA Partensky F., Degroeve S., Echeynie S., Cooke R., Saeys Y., Wuyts J., RA Jabbari K., Bowler C., Panaud O., Piegu B., Ball S.G., Ral J.-P., RA Bouget F.-Y., Piganeau G., De Baets B., Picard A., Delseny M., RA Demaille J., Van de Peer Y., Moreau H.; RT "Genome analysis of the smallest free-living eukaryote Ostreococcus RT tauri unveils many unique features."; RL Proc. Natl. Acad. Sci. U.S.A. 103:11647-11652(2006). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:CEF99977.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CAID01000012; CEF99977.1; -; Genomic_DNA. DR Proteomes; UP000009170; Chromosome 12. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000009170}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000009170}. FT DOMAIN 12 309 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 797 AA; 89809 MW; 2F8A71D8318E3C14 CRC64; MRFTIDDGGS APIEVFFPYD SVYPEQVAYM REMKRALDAR GHGAVEMPTG TGKTITVLSM CVSYQLAHPE VGKIIYCTRT VPEMEKVLEE MKALQAYIEK ELGAETARML SLGLSSRKNM CVNPAVADEG SRESVDGRCR RLTASWVRER RLERQARDAG RTVAAEDGEG DNEGGVSCCD WFEEFETAGE KAVLPPGVYT LHDLRQFGRA KKWCPYFLAR NMISFANVIV YNYQYMLDPK VASLVSSALE KECVVVFDEA HNIDNVCIEA LSVNLRQQTL ENAGRSITSL NARIDKAKQT DERRLRQEYE RLVNGLAQQG VLARGGGEDM LMNPVIPDDI LREAVPGNIR RAEHFVAVLK RFVEYLKFRL QSTQVEQETP TAFLQHCAAN AGIDGKTLKF CYDRLTSLLK TLEVVDMDEY NALSLVANFA ALVGTYSKGF ALILEPYDER YPNIPDPVLQ LACLDASLAI KPVFERFQSV FITSGTLSPI DLYPKLLGFN PVCAKSLEMT LTRECLCPMV ITRGADQQAV STKFDVRDDP NVIQNYGRIL VGLAQTVPDG IVAFFVSYSY MENIVSKWHE TGILREIMQH KLVFIETTDV VETSLALDNY RRACNCGRGA IFLSVARGKV AEGIDFDRHY GRAVVMYGVP YQYTLSRILR ARLEYLRETF QIKESDFLAF DAVRQAAQCV GRVIRSKKDY GLMVFADKRY NSQDKRGKLP GWITSHLHEE VLNLSTDMAM QVARTFMRSM SQPFSHDDSK KSLFDQEMLN RLAAEGGYRE ALPAQARKLA PEIMMHI // ID A0A091CNA3_FUKDA Unreviewed; 780 AA. AC A0A091CNA3; DT 26-NOV-2014, integrated into UniProtKB/TrEMBL. DT 26-NOV-2014, sequence version 1. DT 11-MAY-2016, entry version 14. DE SubName: Full=TFIIH basal transcription factor complex helicase XPD subunit {ECO:0000313|EMBL:KFO18983.1}; GN ORFNames=H920_19647 {ECO:0000313|EMBL:KFO18983.1}; OS Fukomys damarensis (Damaraland mole rat) (Cryptomys damarensis). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; OC Hystricognathi; Bathyergidae; Fukomys. OX NCBI_TaxID=885580 {ECO:0000313|EMBL:KFO18983.1, ECO:0000313|Proteomes:UP000028990}; RN [1] {ECO:0000313|EMBL:KFO18983.1, ECO:0000313|Proteomes:UP000028990} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC TISSUE=Liver {ECO:0000313|EMBL:KFO18983.1}; RA Gladyshev V.N., Fang X.; RT "The Damaraland mole rat (Fukomys damarensis) genome and evolution of RT African mole rats."; RL Submitted (NOV-2013) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; KN125239; KFO18983.1; -; Genomic_DNA. DR Proteomes; UP000028990; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:KFO18983.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000028990}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:KFO18983.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:KFO18983.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:KFO18983.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000028990}. FT DOMAIN 27 303 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 97 120 {ECO:0000256|SAM:Coils}. FT COILED 269 296 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 780 AA; 89257 MW; 160D863695B46D4B CRC64; MFRFAPPQRN DGQDRPMESR GRLNVDGLLV YFPYDYIYPE QFSYMLELKR TLDAKGHGVL EMPSGTGKTV SLLALIMAYQ RAYPLEVTKL IYCSRTVPEI EKVIEELRKL LNFYEKQEGE KLPFLGLALS SRKNLCIHPE VTPLRFGKDV DGKCHSLTAS YVRAQYQQDT SMPHCRFYEE FDAHGRQVPL PAGIYNLDDL KALGQRQGWC PYFLARYSIL HANVVVYSYH YLLDPKIADL VSKELARKAV VVFDEAHNID NVCIDSMSVN LTRRTLDRCQ ANLDTLQKTV LRIKETDEQR LRDEYQRLVE GLREASAARE TDAHLANPVL PAEVLQEAVP GSIRTAEHFL GFLRRLLEFV KWRLRVQHVV QERPPAFLSS LAQRVCIQRK PLRFCAERLR SLLHTLEIAD LADFSPLTLL ANFATLVSTY AKGFTIIIEP FDDRTPTIAN PVLHFSCMDA SLAIKPVFER FQSVIITSGT LSPLDIYPKI LDFHPVTMAT FTMTLARVCL CPMIISRGND QVAISSKFET REDIAVIRNY GNLLLEMSAV VPDGIVAFFT SYQYMESTVA SWYEQGILEN IQRNKLLFIE TQDGAETSVA LEKYQEACEN GRGAILLSVA RGKVSEGIDF VHHYGRAVIM FGVPYVYTQS RILKARLEYL RDQFQIREND FLTFDAMRHA AQCVGRAIRG KTDYGLMVFA DKRFARVDKR GKLPRWIQEH LTDANLNLTV DEGVQVAKYF LRQMAQPFHR EDQLGLSLLS LEQLESEETL QRIEQIAQQL // ID A0A098DJZ1_GIBZA Unreviewed; 789 AA. AC A0A098DJZ1; DT 07-JAN-2015, integrated into UniProtKB/TrEMBL. DT 07-JAN-2015, sequence version 1. DT 11-MAY-2016, entry version 16. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CEF79274.1}; GN ORFNames=FGRRES_04295_M {ECO:0000313|EMBL:CEF79274.1}; OS Gibberella zeae (Wheat head blight fungus) (Fusarium graminearum). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; OC Sordariomycetes; Hypocreomycetidae; Hypocreales; Nectriaceae; OC Fusarium. OX NCBI_TaxID=5518 {ECO:0000313|EMBL:CEF79274.1}; RN [1] {ECO:0000313|EMBL:CEF79274.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=PH-1 {ECO:0000313|EMBL:CEF79274.1}; RX PubMed=26198851; DOI=10.1186/s12864-015-1756-1; RA King R., Urban M., Hammond-Kosack M.C.U., Hassani-Pak K., RA Hammond-Kosack K.E.; RT "The completed genome sequence of the pathogenic ascomycete fungus RT Fusarium graminearum."; RL BMC Genomics 16:544-544(2015). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; HG970333; CEF79274.1; -; Genomic_DNA. DR STRING; 5518.FGSG_04295P0; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR GO; GO:0005634; C:nucleus; IEA:InterPro. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}. SQ SEQUENCE 789 AA; 90911 MW; 75C0DE459A2E5157 CRC64; MKFNIDDLPV LFPYPRIYPA SLSYMCDLKK TLDAGGHCVL EMPSGTGKTV SLLSLIVAYQ QYMPEKRKLI YCSRTMSEIE KALVELKSLM KYRAEELGYE EEFRGLGLTS RKNLCLHPSV KREKSGAIVD ARCRSLTAGF VKEKKERGEN VDVCVYHDNL DLLEPHNLIP NGVWSFDDII RYGEEQKQCP YFTARRMMQY CNVVIFSYHY LLDPKIAERV SKDFSKDCIV VFDEAHNIDN VCIESLSTDI TEDSLRKATR GAQNLENKIS QMRDTDQEQL QNEYQKLVQG LRDADEARQE DAFMANPALP EDLLKEAVPG NIRRAEHFIA FLKRFIEYLK TRMKVRQVIS ETPPSFLAHL REHTFIEKKP LRFCAERLTS LVRTLELTNI EDYQPLQEVA TFATLVATYE KGFLLILEPF ESDTAEVPNP VLHFTCLDAA IAIKPVFDRF YSVIITSGTI SPLEIYPKML DFQTVIQESY AMTLARRSFM PMIVTRGSDQ ASVSTSFQVR NEPSVVRNYG NLLTEFAKIT PDGMVVFFPS YLYMESIISM WQGMGVLDEV WKYKLILVET PDAQETSLAL ETYRTACCNG RGAVLLCVAR GKVSEGIDFD HQYGRTVLCI GVPFQYTESR ILKARLQFLR ETYRIKENDF LSFDAMRHAA QCLGRVLRGK DDYGIMVLAD RRFQKKRTQL PKWINQGLQE SDVNLSTDMA VSSARRFLRT MAQPFRAKDQ EGISTWGYKD LMEHKEKMDL ERIKELEEEA QRPQPAAQEN NFEYDDDELD QDMMEMDGF // ID A0A0A0MXC2_PAPAN Unreviewed; 1456 AA. AC A0A0A0MXC2; DT 07-JAN-2015, integrated into UniProtKB/TrEMBL. DT 07-JAN-2015, sequence version 1. DT 11-MAY-2016, entry version 15. DE SubName: Full=Uncharacterized protein {ECO:0000313|Ensembl:ENSPANP00000014810}; GN Name=PPP1R13L {ECO:0000313|Ensembl:ENSPANP00000014810}; OS Papio anubis (Olive baboon). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; OC Catarrhini; Cercopithecidae; Cercopithecinae; Papio. OX NCBI_TaxID=9555 {ECO:0000313|Ensembl:ENSPANP00000014810, ECO:0000313|Proteomes:UP000028761}; RN [1] {ECO:0000313|Proteomes:UP000028761} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RA Liu Y.L., Abraham K.A., Akbar H.A., Ali S.A., Anosike U.A., RA Aqrawi P.A., Arias F.A., Attaway T.A., Awwad R.A., Babu C.B., RA Bandaranaike D.B., Battles P.B., Bell A.B., Beltran B.B., RA Berhane-Mersha D.B., Bess C.B., Bickham C.B., Bolden T.B., RA Carter K.C., Chau D.C., Chavez A.C., Clerc-Blankenburg K.C., RA Coyle M.C., Dao M.D., Davila M.L.D., Davy-Carroll L.D., Denson S.D., RA Dinh H.D., Fernandez S.F., Fernando P.F., Forbes L.F., Francis C.F., RA Francisco L.F., Fu Q.F., Garcia-Iii R.G., Garrett T.G., Gross S.G., RA Gubbala S.G., Hirani K.H., Hogues M.H., Hollins B.H., Jackson L.J., RA Javaid M.J., Jhangiani S.J., Johnson A.J., Johnson B.J., Jones J.J., RA Joshi V.J., Kalu J.K., Khan N.K., Korchina V.K., Kovar C.K., RA Lago L.L., Lara F.L., Le T.-K.L., Lee S.L., Legall-Iii F.L., RA Lemon S.L., Liu J.L., Liu Y.-S.L., Liyanage D.L., Lopez J.L., RA Lorensuhewa L.L., Mata R.M., Mathew T.M., Mercado C.M., Mercado I.M., RA Morales K.M., Morgan M.M., Munidasa M.M., Ngo D.N., Nguyen L.N., RA Nguyen T.N., Nguyen N.N., Obregon M.O., Okwuonu G.O., Ongeri F.O., RA Onwere C.O., Osifeso I.O., Parra A.P., Patil S.P., Perez A.P., RA Perez Y.P., Pham C.P., Pu L.-L.P., Puazo M.P., Quiroz J.Q., RA Rouhana J.R., Ruiz M.R., Ruiz S.-J.R., Saada N.S., Santibanez J.S., RA Scheel M.S., Schneider B.S., Simmons D.S., Sisson I.S., Tang L.-Y.T., RA Thornton R.T., Tisius J.T., Toledanes G.T., Trejos Z.T., Usmani K.U., RA Varghese R.V., Vattathil S.V., Vee V.V., Walker D.W., RA Weissenberger G.W., White C.W., Williams A.W., Woodworth J.W., RA Wright R.W., Zhu Y.Z., Han Y.H., Newsham I.N., Nazareth L.N., RA Worley K.W., Muzny D.M., Rogers J.R., Gibbs R.G.; RT "Whole Genome Assembly of Papio anubis."; RL Submitted (MAR-2012) to the EMBL/GenBank/DDBJ databases. RN [2] {ECO:0000313|Ensembl:ENSPANP00000014810} RP IDENTIFICATION. RG Ensembl; RL Submitted (NOV-2014) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains 2 ANK repeats. CC {ECO:0000256|RuleBase:RU003321}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an Ensembl CC automatic analysis pipeline and should be considered as CC preliminary data. {ECO:0000313|Ensembl:ENSPANP00000014810}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AHZZ01061746; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AHZZ01061747; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AHZZ01061748; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AHZZ01061749; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AHZZ01061750; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AHZZ01061751; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AHZZ01061752; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AHZZ01061753; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR Ensembl; ENSPANT00000011827; ENSPANP00000014810; ENSPANG00000008539. DR GeneTree; ENSGT00760000119141; -. DR Proteomes; UP000028761; Chromosome 19. DR GO; GO:0030054; C:cell junction; IEA:Ensembl. DR GO; GO:0005737; C:cytoplasm; IEA:Ensembl. DR GO; GO:0045171; C:intercellular bridge; IEA:Ensembl. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0060048; P:cardiac muscle contraction; IEA:Ensembl. DR GO; GO:0003215; P:cardiac right ventricle morphogenesis; IEA:Ensembl. DR GO; GO:0031076; P:embryonic camera-type eye development; IEA:Ensembl. DR GO; GO:0042633; P:hair cycle; IEA:Ensembl. DR GO; GO:0035264; P:multicellular organism growth; IEA:Ensembl. DR GO; GO:0048871; P:multicellular organismal homeostasis; IEA:Ensembl. DR GO; GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IEA:Ensembl. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR GO; GO:0009791; P:post-embryonic development; IEA:Ensembl. DR GO; GO:0003229; P:ventricular cardiac muscle tissue development; IEA:Ensembl. DR Gene3D; 1.25.40.20; -; 1. DR InterPro; IPR002110; Ankyrin_rpt. DR InterPro; IPR020683; Ankyrin_rpt-contain_dom. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR InterPro; IPR001452; SH3_domain. DR Pfam; PF12796; Ank_2; 1. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR Pfam; PF14604; SH3_9; 1. DR PRINTS; PR00452; SH3DOMAIN. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00248; ANK; 2. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SMART; SM00326; SH3; 1. DR SUPFAM; SSF48403; SSF48403; 1. DR SUPFAM; SSF50044; SSF50044; 2. DR SUPFAM; SSF52540; SSF52540; 3. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS50297; ANK_REP_REGION; 1. DR PROSITE; PS50088; ANK_REPEAT; 2. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. DR PROSITE; PS50002; SH3; 1. PE 4: Predicted; KW ANK repeat {ECO:0000256|RuleBase:RU003321}; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000028761}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000028761}. FT DOMAIN 626 731 ANK_REP_REGION. FT {ECO:0000259|PROSITE:PS50297}. FT DOMAIN 709 979 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT DOMAIN 758 815 SH3. {ECO:0000259|PROSITE:PS50002}. SQ SEQUENCE 1456 AA; 160584 MW; C74120AC10160463 CRC64; MDSEAFQSAR DFLDTNFQSL AMKHMDLKQM ELDTAAAKVD ELTKQLESLW SDSPAPPGPQ AGPPSRPPRY SSSSIPEPFG SRGSPRKAAT DGADTPFGRS ESAPTLHPYS PLSPKGRPSS PRTPLYLQPD AYGSLDRAPS PRPRAFDGAG SSLGRAPSPR PGPGPLRQQG PPTPFDFLGR AASPRGSPLS EGPQAFFPER GPSPRPPATA YDAPASAFGS SLLGSGGSAF APPLRAQDDL TLRRRPPKAW NESDLDVAYE KKPSQTASYE RLDVFARPAS PSLQLLPWRE SSLDGLGGTG KDNLTSATLP RNYKVSPLAS DRRSDAGSYR RSLGSAGPSG TLPRSWQPVS RIPMPPSSPQ PRGAPRQRPI PLSMIFKLQN AFWEHGASRA MLPGSPLFTR APLPKLPPQP QPQPQPQPQP QPQLPPQPQP QPQPPTPAPQ PPQQTWPPVN EGPPKPPTEL EPELEIEGLL TPVLEAGDVD EGTVARPLSP TRLQPALPPE AQSVPELEEV ARVLAEIPRP LKRRGSMEQA PAVALPPTHK KQYQQIISRL FHRHGGPGPG GPEPELSTIT EGSEARAGPP APAPPAPIPP PAPSQSSPPE QPQSMEMRSV LRKAGSPRKA RHARLNPLVL LLDAALTGEL EVVQQAVKEM NDPSQPNEEG ITALHNAICG ANYSIVDFLI TTGANVNSPD SHGWTPLHCA ASCNDTVICM ALVQHGAAIF ATTLSDGATA FEKCDPYREG YADCATYLAD VEQSMGLMNS GAVYALWDYS AEFGDELSFR EGESVTVLRR DGPEETDWWW AALHGQEGYV PRNYFGVTPL RFGKDVDGKC HSLTASYVRA QYQHDTSLPH CRFYEEFDAH GREVPLPAGI YNLDDLKALG RRQGWCPYFL ARYSILHANV VVYSYHYLLD PKIADLVSKE LARKAVVVFD EAHNIDNVCI DSMSVNLTRR TLDRCQGNLE TLQKTVLRIK ETDEQRLRDE YRRLVEGLRE ASAARETDAH LANPVLPDEV LQEAVPGSIR TAEHFLGFLR RLLEYVKWRL RVQHVVQESP PAFLSGLAQR VCIQRKPLRF CAERLRSLLH TLEITDLADF SPLTLLANFA TLVSTYAKGF TIIIEPFDDR TPTIANPILH FSCMDASLAI KPVFERFQSV IITSGTLSPL DIYPKILDFH PVTMATFTMT LARVCLCPMI IGRGNDQVAI SSKFETREDI AVIRNYGNLL LEMSAVVPDG IVAFFTSYQY MESTVASWYE QGILENIQRN KLLFIETQDG AETSVALEKY QEACENGRGA ILLSVARGKV SEGIDFVHHY GRAVIMFGVP YVYTQSRILK ARLEYLRDQF QIRENDFLTF DAMRHAAQCV GRAIRGKTDY GLMVFADKRF ARGDKRGKLP RWIQEHLTDA NLNLTVDEGV QVAKYFLRQM AQPFHREDQL GLSLLSLEQL ESEETLQRIE QIAQSC // ID A0A0A2I779_PENEN Unreviewed; 796 AA. AC A0A0A2I779; DT 04-FEB-2015, integrated into UniProtKB/TrEMBL. DT 04-FEB-2015, sequence version 1. DT 11-MAY-2016, entry version 13. DE SubName: Full=Helicase-like, DEXD box c2 type {ECO:0000313|EMBL:KGO38947.1}; GN ORFNames=PEX1_018950 {ECO:0000313|EMBL:KGO60993.1}, GN PEX2_012230 {ECO:0000313|EMBL:KGO62187.1}, GN PEXP_058250 {ECO:0000313|EMBL:KGO38947.1}; OS Penicillium expansum (Blue mold rot fungus). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; OC Eurotiomycetidae; Eurotiales; Aspergillaceae; Penicillium. OX NCBI_TaxID=27334 {ECO:0000313|EMBL:KGO38947.1, ECO:0000313|Proteomes:UP000030154}; RN [1] {ECO:0000313|EMBL:KGO62187.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=MD-8 {ECO:0000313|EMBL:KGO62187.1}; RA Ballester A.-R., Marcet-Houben M., Levin E., Sela N., Selma-Lazaro C., RA Carmona L., Wisniewski M., Droby S., Gonzalez-Candelas L., RA Gabaldon T.; RL Submitted (AUG-2014) to the EMBL/GenBank/DDBJ databases. RN [2] {ECO:0000313|Proteomes:UP000030143, ECO:0000313|Proteomes:UP000030154, ECO:0000313|Proteomes:UP000030155} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=CMP-1 {ECO:0000313|EMBL:KGO60993.1, RC ECO:0000313|Proteomes:UP000030155}, D1 {ECO:0000313|EMBL:KGO38947.1}, RC d1 {ECO:0000313|Proteomes:UP000030154}, and RC MD-8 {ECO:0000313|EMBL:KGO62187.1, ECO:0000313|Proteomes:UP000030143}; RX PubMed=25338147; DOI=10.1094/MPMI-09-14-0261-FI; RA Ballester A.R., Marcet-Houben M., Levin E., Sela N., Selma-Lazaro C., RA Carmona L., Wisniewski M., Droby S., Gonzalez-Candelas L., RA Gabaldon T.; RT "Genome, transcriptome, and functional analyses of Penicillium RT expansum provide new insights into secondary metabolism and RT pathogenicity."; RL Mol. Plant Microbe Interact. 28:232-248(2015). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:KGO38947.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; JQFY01000193; KGO38947.1; -; Genomic_DNA. DR EMBL; JQFX01000921; KGO60993.1; -; Genomic_DNA. DR EMBL; JQFZ01000023; KGO62187.1; -; Genomic_DNA. DR EnsemblFungi; KGO38947; KGO38947; PEXP_058250. DR EnsemblFungi; KGO60993; KGO60993; PEX1_018950. DR EnsemblFungi; KGO62187; KGO62187; PEX2_012230. DR PhylomeDB; A0A0A2I779; -. DR Proteomes; UP000030143; Unassembled WGS sequence. DR Proteomes; UP000030154; Unassembled WGS sequence. DR Proteomes; UP000030155; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:KGO38947.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000030143}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:KGO38947.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:KGO38947.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:KGO38947.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000030143}. FT DOMAIN 7 282 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 248 297 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 796 AA; 91017 MW; CF1942635E6BFCCC CRC64; MKFFIDDLPV LFPYPRIYPE QYAYMCDLKK TLDAGGHCVL EMPSGTGKTV SLLSLIVAYQ QHYPEHRKLI YCSRTMSEIE KALAELKALM EHRAKELGHE EEFRALGLTS RKNLCLHPSV KREKSGTVVD ARCRSLTAGF VKEKKERGED VELCVYHENL DLLEPHNLVP PGVFTLDGLA RYGEEHKQCP YFSARRMMPW CNIIIYSYHY LLDPKIAERV SRELSKDCIV VFDEAHNIDN VCIESLSIDL SEDSLRKATR GANNLERRIE EMKSTDEEKL KNEYSKLVEG LQEAEKAREE DQFISNPVLP DDLLKEAVPG NIRRAEHFIS FLKRFIEYLK TRMKVTHTIS ETPPSFLTHL KDLTYIERKP LRFCAERLTS LVRTLELVNI EDYQPLQEVA TFATLVATYD KGFVLILEPF ESEAATVPNP ILHFTCLDAA IAIKPVFDRF SSVIITSGTL SPLEMYPKML GFTAVLQESY SMTLARRSFL PMIVTRGSDQ AQVSSSFGIR NDPGVVRNYG SLVTEFARIT PDGVVVFFPS YLYMESIISM WQGMGILDQI WNYKLILVET PDAQESSLAL ETYRTACCNG RGAILFCVAR GKVSEGIDFD HHYGRAVLCI GVPFQYTESR ILKARLEFLR ENYRIRENDF LSFDAIRHAA QCLGRVLRGK DDYGVMVLAD RRFERKRPQL PKWINQAMLD SETNLSTDMA VSNAKNFLRT MAQPFKSKDQ EGISTWGLAD IERHEAKRRT EEERMMREEV NNGHATGGMI PSASRIVEDD YDDDNIDADL MMLDAP // ID A0A0A2L9G0_PENIT Unreviewed; 795 AA. AC A0A0A2L9G0; DT 04-FEB-2015, integrated into UniProtKB/TrEMBL. DT 04-FEB-2015, sequence version 1. DT 11-MAY-2016, entry version 11. DE SubName: Full=Helicase-like, DEXD box c2 type {ECO:0000313|EMBL:KGO76599.1}; GN ORFNames=PITC_091220 {ECO:0000313|EMBL:KGO76599.1}; OS Penicillium italicum (Blue mold). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; OC Eurotiomycetidae; Eurotiales; Aspergillaceae; Penicillium. OX NCBI_TaxID=40296 {ECO:0000313|EMBL:KGO76599.1, ECO:0000313|Proteomes:UP000030104}; RN [1] {ECO:0000313|EMBL:KGO76599.1, ECO:0000313|Proteomes:UP000030104} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=PHI-1 {ECO:0000313|EMBL:KGO76599.1, RC ECO:0000313|Proteomes:UP000030104}; RX PubMed=25338147; DOI=10.1094/MPMI-09-14-0261-FI; RA Ballester A.R., Marcet-Houben M., Levin E., Sela N., Selma-Lazaro C., RA Carmona L., Wisniewski M., Droby S., Gonzalez-Candelas L., RA Gabaldon T.; RT "Genome, transcriptome, and functional analyses of Penicillium RT expansum provide new insights into secondary metabolism and RT pathogenicity."; RL Mol. Plant Microbe Interact. 28:232-248(2015). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:KGO76599.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; JQGA01000240; KGO76599.1; -; Genomic_DNA. DR EnsemblFungi; KGO76599; KGO76599; PITC_091220. DR PhylomeDB; A0A0A2L9G0; -. DR Proteomes; UP000030104; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:KGO76599.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000030104}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:KGO76599.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:KGO76599.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:KGO76599.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000030104}. FT DOMAIN 7 282 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 248 297 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 795 AA; 90946 MW; C2B5710D18B578AF CRC64; MKFFIDDLPV LFPYPRIYPE QYAYMCDLKK TLDAGGHCVL EMPSGTGKTV SLLSLIVAYQ QHYPEHRKLI YCSRTMSEIE KALAELKALM EHRAKELGHE EEFRALGLTS RKNLCLHPSV KREKSGTVVD ARCRSLTAGF VKEKKERGED VELCVYHENL DLLEPHNLVP PGVFTLDGLA RYGEEHKQCP YFSARRMMPW CNIIIYSYHY LLDPKIAERV SRELSKDCIV VFDEAHNIDN VCIESLSLDL SEDSLRKATR GANNLERRIE EMKSTDEEKL KNEYSKLVEG LQEAEKAREE DQFISNPVLP DDLLKEAVPG NIRRAEHFIS FLKRFIEYLK TRMKVTHTIS ETPPSFLTHL KDLTYIERKP LRFCAERLTS LVRTLELVNI EDYQPLQEVA TFATLVATYD KGFVLILEPF ESEAATVPNP ILHFTCLDAA IAIKPVFDRF SSVIITSGTL SPLEMYPKML GFTAVLQESY SMTLARRSFL PMIVTRGSDQ AQVSSSFGIR NDPGVVRNYG SLVTEFARIT PDGVVVFFPS YLYMESIISM WQGMGILDQI WNYKLILVET PDAQESSLAL ETYRTACCNG RGAILFCVAR GKVSEGIDFD HHYGRAVLCI GVPFQYTESR ILKARLEFLR ENYRIRENDF LSFDAIRHAA QCLGRVLRGK DDYGVMVLAD RRFERKRPQL PKWINQAMLD SETNLSTDMA VSNAKNFLRT MAQPFKSKDQ EGISTWGLAD IERHEAKRRT EEERMMRDEV NNGHAMGGMI PSASRIVEDD YDDNIDADLM MLDVP // ID A0A0A7LDX0_9EURY Unreviewed; 635 AA. AC A0A0A7LDX0; DT 04-MAR-2015, integrated into UniProtKB/TrEMBL. DT 04-MAR-2015, sequence version 1. DT 09-DEC-2015, entry version 9. DE SubName: Full=ATP-dependent DNA helicase {ECO:0000313|EMBL:AIZ57168.1}; DE EC=3.6.4.12 {ECO:0000313|EMBL:AIZ57168.1}; GN ORFNames=Mpt1_c13060 {ECO:0000313|EMBL:AIZ57168.1}; OS Candidatus Methanoplasma termitum. OC Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; OC Methanomassiliicoccaceae; Candidatus Methanoplasma. OX NCBI_TaxID=1577791 {ECO:0000313|EMBL:AIZ57168.1, ECO:0000313|Proteomes:UP000030787}; RN [1] {ECO:0000313|EMBL:AIZ57168.1, ECO:0000313|Proteomes:UP000030787} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=MpT1 {ECO:0000313|EMBL:AIZ57168.1}; RX PubMed=25501486; RA Lang K., Schuldes J., Klingl A., Poehlein A., Daniel R., Brune A.; RT "Comparative Genome Analysis of 'Candidatus Methanoplasma termitum' RT Indicates a New Mode of Energy Metabolism in the Seventh Order of RT Methanogens."; RL Appl. Environ. Microbiol. 0:0-0(2014). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP010070; AIZ57168.1; -; Genomic_DNA. DR RefSeq; WP_048113257.1; NZ_CP010070.1. DR EnsemblBacteria; AIZ57168; AIZ57168; Mpt1_c13060. DR GeneID; 24818966; -. DR KEGG; mear:Mpt1_c13060; -. DR KO; K10844; -. DR Proteomes; UP000030787; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 3. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000313|EMBL:AIZ57168.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000030787}; KW Helicase {ECO:0000313|EMBL:AIZ57168.1}; KW Hydrolase {ECO:0000313|EMBL:AIZ57168.1}; KW Nucleotide-binding {ECO:0000313|EMBL:AIZ57168.1}; KW Reference proteome {ECO:0000313|Proteomes:UP000030787}. FT DOMAIN 5 285 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 635 AA; 71601 MW; E3D2C7A3EB42E1FE CRC64; MTGSPDVRDI FPYDFRGYQE EIAELIANTT NNGVAAVIES GTGTGKTVVS LTGALKTIIG TDSKIIYLTR TKSQQKQIVY EAGAISQKKQ IICIGVQGRG VSTCPMMSKD PENASGTSEE LSKLCSEYKK DDGTGRPCKY YENIGRTDLQ EILDHVRNVH PEPEKLSEYC LKKELCPYET VKHLIKHADV VAAPYSFIFM PHIRERFLEW AGTPLSKMVM IVDEAHNLPD YLREVMTLEY SMKAMDLAEK EAMEWNDPEV YSGLSVSDII AVLRECLNEA LSEYLTGDDG MIPYTFLQDE LMYRLGVSSH ALDMIYKGLI DHGEMIANIK KAKKKLPRSF IRSMGAFLTL WNTADEEMNI FLVLGGENPK FQAYCLDPRV AAEPLRSCKA SVHMSGTLAP LSDYTEEIGL EEVAERTFPS PFPPENLKIV YVNDVSTKFD EFNNIPEIYS RMKEHIISLA RVVNKNTAVF FPSYSLMERF LRDGIEKDIG KPLFIERRGM TQPELMEEVS QFKLSEGSIL FAITGGRISE GLDFPDKDME MAILVGIPYP KPTAKQEALR RYYDMRFGNG WEHSSKIPAM RKMRQAIGRL IRSGTDRGMA VILDRRVFNL EDIKAEPTDD PCGDVMEFFG KGSKS // ID A0A0A7LFR3_9EURY Unreviewed; 682 AA. AC A0A0A7LFR3; DT 04-MAR-2015, integrated into UniProtKB/TrEMBL. DT 04-MAR-2015, sequence version 1. DT 09-DEC-2015, entry version 9. DE SubName: Full=ATP-dependent DNA helicase {ECO:0000313|EMBL:AIZ56346.1}; DE EC=3.6.4.12 {ECO:0000313|EMBL:AIZ56346.1}; GN ORFNames=Mpt1_c04530 {ECO:0000313|EMBL:AIZ56346.1}; OS Candidatus Methanoplasma termitum. OC Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; OC Methanomassiliicoccaceae; Candidatus Methanoplasma. OX NCBI_TaxID=1577791 {ECO:0000313|EMBL:AIZ56346.1, ECO:0000313|Proteomes:UP000030787}; RN [1] {ECO:0000313|EMBL:AIZ56346.1, ECO:0000313|Proteomes:UP000030787} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=MpT1 {ECO:0000313|EMBL:AIZ56346.1}; RX PubMed=25501486; RA Lang K., Schuldes J., Klingl A., Poehlein A., Daniel R., Brune A.; RT "Comparative Genome Analysis of 'Candidatus Methanoplasma termitum' RT Indicates a New Mode of Energy Metabolism in the Seventh Order of RT Methanogens."; RL Appl. Environ. Microbiol. 0:0-0(2014). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP010070; AIZ56346.1; -; Genomic_DNA. DR RefSeq; WP_048111705.1; NZ_CP010070.1. DR EnsemblBacteria; AIZ56346; AIZ56346; Mpt1_c04530. DR GeneID; 24818123; -. DR KEGG; mear:Mpt1_c04530; -. DR KO; K10844; -. DR Proteomes; UP000030787; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 4. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR014001; Helicase_ATP-bd. DR InterPro; IPR001650; Helicase_C. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00487; DEXDc; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 5. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. DR PROSITE; PS51194; HELICASE_CTER; 1. PE 4: Predicted; KW ATP-binding {ECO:0000313|EMBL:AIZ56346.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000030787}; KW Helicase {ECO:0000313|EMBL:AIZ56346.1}; KW Hydrolase {ECO:0000313|EMBL:AIZ56346.1}; KW Nucleotide-binding {ECO:0000313|EMBL:AIZ56346.1}; KW Reference proteome {ECO:0000313|Proteomes:UP000030787}. FT DOMAIN 53 323 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT DOMAIN 504 682 Helicase C-terminal. FT {ECO:0000259|PROSITE:PS51194}. SQ SEQUENCE 682 AA; 77027 MW; 396BCD459874F3CC CRC64; MEQQFCPNCS SIIFPNQKKC GSCGRAVDRS SGIGLDSFLN RSQPEKKMVK EENPEAPYLP YEPRPMQLEI ITDVRRAIDE GRHIVMESGT GTGKTIVSLA AGLEHAMRTG KKIVYLTRTI SQSDQVMKEL RAISTIKQVS GITITGRNKS CPLFAKEGLD DLPPNVLSLM CDDKKKKSMN DNAGGCRFFD RTKAEINNVM SYCLKEFPTS AELDTYCEKA GVCPYEMKKM LMKEMDVVVA PYIHILSEDI RTNFIANLGG EDVPLLLIVD EAHNLIDAAR DQESFSITMR MIEAAMDECT VTKTGETLNS IKIEDVIKFL KAAIKQLATQ NISLGVKEFR LGKDALESLI MKRFNVTRNE LNVLIEDMIG VGDKRMDTLS EKGDFSISEI YTLGVALRDW VMSDNDRYVR SVKTSENGEY LFAACIDPSD IVKFMQEQQG AVHMSGTLQP LEQYYKVMGL PRTAIARTYP SPFPKENRSV IYVDDVTTKY DKRDPVMMSR IENRIIDLCN AVEKNTLVFF PSYKMMKDMR ASLELKIKKP MFWEESGQQK RTMNALNAFR RGSNGVFFSV MGGSVAEGID FPGEELCFTI IVGIPYPPPS LELKAMSDMF DARYGPRMGW RYTSEVPAIR KIRQAIGRMI RTETDYGMAV ILDSRVSEYQ RQLEATLSKH PIKDAVDFFS KR // ID A0A0B1PAN1_UNCNE Unreviewed; 779 AA. AC A0A0B1PAN1; DT 04-MAR-2015, integrated into UniProtKB/TrEMBL. DT 04-MAR-2015, sequence version 1. DT 11-MAY-2016, entry version 11. DE SubName: Full=Putative dna repair helicase rad3 {ECO:0000313|EMBL:KHJ33719.1}; GN ORFNames=EV44_g2756 {ECO:0000313|EMBL:KHJ33719.1}; OS Uncinula necator (Grape powdery mildew). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; OC Erysiphales; Erysiphaceae; Erysiphe. OX NCBI_TaxID=52586 {ECO:0000313|EMBL:KHJ33719.1, ECO:0000313|Proteomes:UP000030854}; RN [1] {ECO:0000313|EMBL:KHJ33719.1, ECO:0000313|Proteomes:UP000030854} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=C {ECO:0000313|EMBL:KHJ33719.1}; RX PubMed=25487071; RA Jones L., Riaz S., Morales-Cruz A., Amrine K.C., McGuire B., RA Gubler W.D., Walker M.A., Cantu D.; RT "Adaptive genomic structural variation in the grape powdery mildew RT pathogen, Erysiphe necator."; RL BMC Genomics 15:1081-1081(2014). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:KHJ33719.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; JNVN01001269; KHJ33719.1; -; Genomic_DNA. DR EnsemblFungi; KHJ33719; KHJ33719; EV44_g2756. DR Proteomes; UP000030854; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:KHJ33719.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000030854}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:KHJ33719.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:KHJ33719.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:KHJ33719.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000030854}. FT DOMAIN 1 268 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 779 AA; 88919 MW; 2F9A47CC46698B66 CRC64; MKFNIDSSGL ILLETLDAGG HCVLEMPSGT GKTVSLLSLI VAYQQYYPEH RKLIYCSRTM SEIEKALAEL RALMKYRAEQ LGYEEEFRGL GLTSRKNLCL HPTVKREKSG AIVDAKCRSL TARFVKEKKE RGENVPICIY HDNLDLKEPH NLVDPGVYTL ESLMRYCEQE KICPYFASRR MMSFCNVIIY SYHYLLDPKI AERVSKELSK DCIVVFDEAH NIDNVCIESL STDITNDSLR KATRGAQNLE MKISEMKEKD KEKLVNEYAK LVEGLKDASE AQAEDAFMSN PALPDDLLTE AVPGNIRRAE HFVAFLKRFI EYLKTRMKVR QVISETPPSF LAHLKEYTFI EKKPLRFCAE RLSSLVRTLE LANIEDYQPL QEVATFATLV ATYEKGFLLI LEPYESDTAE VPNPVLHFTC LDAAIAIKPV FDRFSSVIIT SGTISPLEMY PKILGFSTVV QESYSMTLAR RSFLPMIVTR GSDQVAISSG FQVRNEPSVV RNYGHLLTEF SKLTPDGMVV FFPSYLYMES IISMWQGMGI LDEVWKYKLI LVETPDAQET SLALETYRTA CCNGRGAILL CVARGKVSEG IDFDHQYGRT VLCIGVPFQY TESRILKARL EFLRETYRIR ENDFLSFDAM RHAAQCLGRV LRGKDDYGIM VLADRRFLRK RNQLPRWINQ ALLDSEVNLS TDMAFGIAKK FLRNMAQPFR SSDQEGISTW SLEDLERFKE KEEEEAIKKL MTADGGSKEE SLPQKELLTA NITDILDDDE LEVCMMDLN // ID A0A0B2W0Z0_TOXCA Unreviewed; 845 AA. AC A0A0B2W0Z0; DT 04-MAR-2015, integrated into UniProtKB/TrEMBL. DT 04-MAR-2015, sequence version 1. DT 11-MAY-2016, entry version 12. DE SubName: Full=TFIIH basal transcription factor complex helicase XPD subunit {ECO:0000313|EMBL:KHN86850.1}; GN Name=ERCC2 {ECO:0000313|EMBL:KHN86850.1}; GN ORFNames=Tcan_07799 {ECO:0000313|EMBL:KHN86850.1}; OS Toxocara canis (Canine roundworm). OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Ascaridida; OC Ascaridoidea; Toxocaridae; Toxocara. OX NCBI_TaxID=6265 {ECO:0000313|EMBL:KHN86850.1, ECO:0000313|Proteomes:UP000031036}; RN [1] {ECO:0000313|EMBL:KHN86850.1, ECO:0000313|Proteomes:UP000031036} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=PN_DK_2014 {ECO:0000313|EMBL:KHN86850.1}; RA Zhu X.-Q., Korhonen P.K., Cai H., Young N.D., Nejsum P., RA von Samson-Himmelstjerna G., Boag P.R., Tan P., Li Q., Min J., RA Yang Y., Wang X., Fang X., Hall R.S., Hofmann A., Sternberg P.W., RA Jex A.R., Gasser R.B.; RT "Genetic blueprint of the zoonotic pathogen Toxocara canis."; RL Submitted (NOV-2014) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:KHN86850.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; JPKZ01000517; KHN86850.1; -; Genomic_DNA. DR Proteomes; UP000031036; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:KHN86850.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000031036}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:KHN86850.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:KHN86850.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:KHN86850.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000031036}. FT DOMAIN 88 368 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 845 AA; 95644 MW; 02E740844E62AB7D CRC64; MQKRFVAMRP EKEVNSMNLS NRLTESLKTV AVWVAAEVKQ NEQPQTGYHV ARIRSGRFGI GGLQFLGARG GGIGLLGIPL IPRIDVDGLE VYFPYEFVYP EQVLYMEEVK KTLDAQGHAL LEMPSGTGKT VSLLSLVVAY MLKFPDRLDK LIYCSRTIPE IEKCVEELRN LFKYYDQVVG KRPALLALAM SARKNLCIND PVASLRQGTA VDGACQKRFR LTASFVRAKR KMQPDLPACS FFEKFDAQRD IVLPTGVYNL SDFRKWGRQK GVCPYFVARA YADRANIIVY SYHYILDPKI AELVSKNFSR RSCVVFDEAH NIDNVCIESM SVSLTKSTVE KGLQRLDLLD THIQRLKDEN SERLQSEYDR LVEGLRQVEQ ERANDQTLAS PVLPDAILQE AVPGMIRTAQ HFCNFLRRFI EYLKYRMRCT TVLVESPAAF LLDIQERMFI DRKPLRFCAE RFASLARTLE LADISDFCSL VLITNFATLV STYARGFSLI IEPLDEKSGA AHSCTLHLSC MDASIAIRPV LQRFQSVIIT SGTLSPLEMY PKILDFDPAI MASLSMTLAR PCIAPLIVSK GNDQVAITSR FESREDAAVI RNYGNLVLEM ASIVPDGIVV FFTSYAYMEN VVATWYDQRI IDELMKYKLL FIETTDALET SVALEKYVEA CDSGRGAVLF SVARGKVSEG IDFSHHLGRA VIMLGIPYVY TESRILRARL EYLREQFGIK ENDFLTFDAM RNAAQCVGRA LRGKADYGLM IFADKRYAKK DKMGKLPRWI QEYLTPGNIN LSIEEAGMTA RRWLPLMAQP FTKDDQLGVA LLTQEMIEGH QPVNKRFAHV VQEVD // ID A0A0B5HL31_9ARCH Unreviewed; 607 AA. AC A0A0B5HL31; DT 01-APR-2015, integrated into UniProtKB/TrEMBL. DT 01-APR-2015, sequence version 1. DT 16-MAR-2016, entry version 10. DE SubName: Full=ATP dependent helicase {ECO:0000313|EMBL:AJF62745.1}; GN ORFNames=QT11_C0001G0603 {ECO:0000313|EMBL:AJF62745.1}; OS archaeon GW2011_AR20. OC Archaea. OX NCBI_TaxID=1579378 {ECO:0000313|EMBL:AJF62745.1, ECO:0000313|Proteomes:UP000031765}; RN [1] {ECO:0000313|EMBL:AJF62745.1, ECO:0000313|Proteomes:UP000031765} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RA Castelle C.J., Wrighton K.C., Thomas B.C., Hug L.A., Brown C.T., RA Wilkins M.J., Frischkorn K.R., Tringe S.G., Singh A., Markillie L.M., RA Taylor R.C., Williams K.H., Banfield J.F.; RT "Genomic expansion of domain Archaea highlights roles for organisms RT from new phyla in anaerobic carbon cycling."; RL Submitted (DEC-2014) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP010426; AJF62745.1; -; Genomic_DNA. DR KEGG; arg:QT11_C0001G0603; -. DR KO; K10844; -. DR Proteomes; UP000031765; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR014001; Helicase_ATP-bd. DR InterPro; IPR001650; Helicase_C. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00487; DEXDc; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. DR PROSITE; PS51194; HELICASE_CTER; 1. PE 4: Predicted; KW ATP-binding {ECO:0000313|EMBL:AJF62745.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000031765}; KW Helicase {ECO:0000313|EMBL:AJF62745.1}; KW Hydrolase {ECO:0000313|EMBL:AJF62745.1}; KW Nucleotide-binding {ECO:0000313|EMBL:AJF62745.1}; KW Reference proteome {ECO:0000313|Proteomes:UP000031765}. FT DOMAIN 1 260 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT DOMAIN 423 607 Helicase C-terminal. FT {ECO:0000259|PROSITE:PS51194}. SQ SEQUENCE 607 AA; 70356 MW; BE5367151CA423B0 CRC64; MQVLFPYDNI RETQDNLIND VIECVKDKKH LIAHVPTGIG KTAGVLAPLL KYSKDNDLTI FFLTPKHTQH TIVVETLKLI KEKYKINLNV ADFIGKKGMC LQNNVQNMES SEFYNFCNHL VENKTCEYYE KFHDSSDKNY FISSIKKRSP MHVQDLIEIS RIEKMCPYEA TAELAKNSNI VIADYLHILH PQIRETFLKK INKSLDKCIL IFDEAHNLDR RARELLSISL SDYLLDLAIK EADRFNIPLV EDLAGLKNIL LSFNFKDEML IKKEDLTKEI KDIAELIKNL DYSSEIVLEE QKRSFLNHVS NFLKSWLGKD EGFVRILKKE IKNNKKITEI SYNCLDPSFI TEPLISNSNL IICMSGTLTP TKMYKDLLGF DNVKLVEYES TFPKQNELNL IVPNTTTKFT LRNDFMFQRI AKECSDIVNE VPGNSIIFFP SYDLLNRIYS NFKNLCTKRI FIEDSSHNKS EKEDLIRGFK ENYEKGSVLM AVSSASFGEG IDLLGDLLKC VIIVGIPLSK LDLETNELIN HYDKKYGKGR DYAYIYPAII KTLQNAGRCI RSETDKGIVV FLDERYSWPN YRNCFPKDKH FITTRLPLDK IREFFKN // ID A0A0B5HLA7_9ARCH Unreviewed; 628 AA. AC A0A0B5HLA7; DT 01-APR-2015, integrated into UniProtKB/TrEMBL. DT 01-APR-2015, sequence version 1. DT 09-DEC-2015, entry version 7. DE SubName: Full=ATP dependent helicase {ECO:0000313|EMBL:AJF61086.1}; GN ORFNames=QT06_C0001G0242 {ECO:0000313|EMBL:AJF61086.1}; OS archaeon GW2011_AR15. OC Archaea. OX NCBI_TaxID=1579373 {ECO:0000313|EMBL:AJF61086.1, ECO:0000313|Proteomes:UP000031776}; RN [1] {ECO:0000313|EMBL:AJF61086.1, ECO:0000313|Proteomes:UP000031776} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RA Castelle C.J., Wrighton K.C., Thomas B.C., Hug L.A., Brown C.T., RA Wilkins M.J., Frischkorn K.R., Tringe S.G., Singh A., Markillie L.M., RA Taylor R.C., Williams K.H., Banfield J.F.; RT "Genomic expansion of domain Archaea highlights roles for organisms RT from new phyla in anaerobic carbon cycling."; RL Submitted (DEC-2014) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP010425; AJF61086.1; -; Genomic_DNA. DR Proteomes; UP000031776; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 4. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR014001; Helicase_ATP-bd. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00487; DEXDc; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000313|EMBL:AJF61086.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000031776}; KW Helicase {ECO:0000313|EMBL:AJF61086.1}; KW Hydrolase {ECO:0000313|EMBL:AJF61086.1}; KW Nucleotide-binding {ECO:0000313|EMBL:AJF61086.1}; KW Reference proteome {ECO:0000313|Proteomes:UP000031776}. FT DOMAIN 7 286 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 628 AA; 71633 MW; 8FED121B851B443F CRC64; MISEARKQEL LFPYEIVREE QNKLLLLTAA TIENKRNLIV HAPTGLGKTA ATLSPALKAA IDKDMTVLFL TSRHTQHKIA IETLKLIKEK FGADTSSVSI IGKKWMCIQP GVSSLYSKDF AEYCKRLKEE KKCEFYTNAR KNQNTFTIGA TKLLSNIKGL SPLTTEEVIE HSEDERMCPY EISLGMAKNA KVIIADYYYL FHPKIGENFL AKAEKDISKL IVIVDEAHNL PDRLKDLASE YLTTITISRA IKEAEKFGYD NTVDILAEIK NILEELAEGM KIESEAKLTR EQFESKLEGY DYDQLIGDLE HVGDAIRETQ KQSYIGAIAA FLEAWQGRDE GFTRILSYKR GLREPFISIS YRCLDPSVVC GEIINNTCST ILMSGTLLPT SMYKELLGLE DAQEVVFSDP FPKKNRINLV VPKTTTKFTR RDEKQFQLQA KMLAEMVNAI PGNSAVFFPS YYLRDRILVY FDSDCVKTVF TEKPHMTKAE KQSMLDRFKE YKDIGATLLA VASGSFGEGI DLPGDFLKGV IVVGLPLSQP DLEKKSLIEY FDKKFSRGWD YGYLFPAFNK TLQNAGRCIR SETDKGIIIF LDERYIWPNY KRCFPEDWEI EVSENYKGMI REFFNTKK // ID A0A0C2N678_THEKT Unreviewed; 675 AA. AC A0A0C2N678; DT 01-APR-2015, integrated into UniProtKB/TrEMBL. DT 01-APR-2015, sequence version 1. DT 11-MAY-2016, entry version 12. DE SubName: Full=TFIIH basal transcription factor complex helicase XPD subunit {ECO:0000313|EMBL:KII69442.1}; GN ORFNames=RF11_11087 {ECO:0000313|EMBL:KII69442.1}; OS Thelohanellus kitauei (Myxosporean). OC Eukaryota; Metazoa; Cnidaria; Myxozoa; Myxosporea; Bivalvulida; OC Platysporina; Myxobolidae; Thelohanellus. OX NCBI_TaxID=669202 {ECO:0000313|EMBL:KII69442.1, ECO:0000313|Proteomes:UP000031668}; RN [1] {ECO:0000313|EMBL:KII69442.1, ECO:0000313|Proteomes:UP000031668} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Wuqing {ECO:0000313|EMBL:KII69442.1}; RX PubMed=25381665; DOI=10.1093/gbe/evu247; RA Yang Y., Xiong J., Zhou Z., Huo F., Miao W., Ran C., Liu Y., Zhang J., RA Feng J., Wang M., Wang M., Wang L., Yao B.; RT "The genome of the myxosporean Thelohanellus kitauei shows adaptations RT to nutrient acquisition within its fish host."; RL Genome Biol. Evol. 6:3182-3198(2014). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:KII69442.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; JWZT01002428; KII69442.1; -; Genomic_DNA. DR EnsemblMetazoa; KII69442; KII69442; RF11_11087. DR Proteomes; UP000031668; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 2. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:KII69442.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000031668}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:KII69442.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:KII69442.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:KII69442.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000031668}. FT DOMAIN 40 316 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 675 AA; 76185 MW; 746787FC8D21CCE8 CRC64; MDFLKLYGIL WRVLGTMETS AMIEFTVTQT QQIMKFEIDG LAVLFPYETI YPEQYQYMTY LKQTLDAGGN SVLEMPSGTG KTVSLLSLII SYMTQNPAKY SKLIYCTRTV SEIEKVLDEV SRLNDYYKKT QQNYVDFLSI CLSSRKNLCI NESVCGVDAR EVDRKCHTLT SSTTRAKANE TGVELCDYFE NFEKDGRGYS VPAGVYKLDK WKEFARQKQW CPYFLARQSV IECKILVYSY AYLIDPKVAG IVSKEIESSS IVIFDEAHNI DSACIEAFSV TLDQSIIIGC REALELVADK LSNVKLSNRE KLESEYSLLL EGLQKLRTTQ NKDFFLPNPV ISQEILEEAV PGNIRKSEHF LSFMTRFVEY VAFKMNLNYL VVETPATFLS HVQEHAGIDK RALRFCSERL RSLLAVLELD NRPNISSPLG VVASFGTIVS SNEKGFCVVT EPFDPASPNI PRPKVYLNCM DASLTIKPVF DRFKCIIITS GTLSPLDMYP RLLNFRPCIL ASLTVSVARQ NILPLIVTRG ADQCVISTRF SDRMEPAVIR NYGMLVAEVC KSVSDGVVCF FTSYRHMEAA IASWNDTGLI SRIQSSKLIF VETPNFEETN LALNGYRRAC ECGRGGLLFS IARGKVSEGI DFYDHLGRAV IVIGIPYVFT LSSTLRARLD YLRDT // ID A0A0C4DRK9_MAGP6 Unreviewed; 792 AA. AC A0A0C4DRK9; DT 01-APR-2015, integrated into UniProtKB/TrEMBL. DT 01-APR-2015, sequence version 1. DT 11-MAY-2016, entry version 14. DE SubName: Full=DNA repair helicase rad15 {ECO:0000313|EMBL:KLU83461.1}; DE SubName: Full=Uncharacterized protein {ECO:0000313|EnsemblFungi:MAPG_02521T0}; GN ORFNames=MAPG_02521 {ECO:0000313|EMBL:KLU83461.1}; OS Magnaporthiopsis poae (strain ATCC 64411 / 73-15) (Kentucky bluegrass OS fungus) (Magnaporthe poae). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; OC Sordariomycetes; Sordariomycetidae; Magnaporthales; Magnaporthaceae; OC Magnaporthiopsis. OX NCBI_TaxID=644358 {ECO:0000313|EnsemblFungi:MAPG_02521T0, ECO:0000313|Proteomes:UP000011715}; RN [1] {ECO:0000313|EMBL:KLU83461.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=ATCC 64411 {ECO:0000313|EMBL:KLU83461.1}; RG The Broad Institute Genome Sequencing Platform; RG Broad Institute Genome Sequencing Center for Infectious Disease; RA Ma L.-J., Dead R., Young S., Zeng Q., Koehrsen M., Alvarado L., RA Berlin A., Chapman S.B., Chen Z., Freedman E., Gellesch M., RA Goldberg J., Griggs A., Gujja S., Heilman E.R., Heiman D., Hepburn T., RA Howarth C., Jen D., Larson L., Mehta T., Neiman D., Pearson M., RA Roberts A., Saif S., Shea T., Shenoy N., Sisk P., Stolte C., Sykes S., RA Walk T., White J., Yandava C., Haas B., Nusbaum C., Birren B.; RT "The Genome Sequence of Magnaporthe poae strain ATCC 64411."; RL Submitted (MAY-2010) to the EMBL/GenBank/DDBJ databases. RN [2] {ECO:0000313|EnsemblFungi:MAPG_02521T0} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 64411 / 73-15 {ECO:0000313|EnsemblFungi:MAPG_02521T0}; RA Ma L.-J., Dead R., Young S., Zeng Q., Koehrsen M., Alvarado L., RA Berlin A., Chapman S.B., Chen Z., Freedman E., Gellesch M., RA Goldberg J., Griggs A., Gujja S., Heilman E.R., Heiman D., Hepburn T., RA Howarth C., Jen D., Larson L., Mehta T., Neiman D., Pearson M., RA Roberts A., Saif S., Shea T., Shenoy N., Sisk P., Stolte C., Sykes S., RA Walk T., White J., Yandava C., Haas B., Nusbaum C., Birren B.; RT "The genome sequence of Magnaporthe poae strain ATCC 64411."; RL Submitted (MAY-2010) to the EMBL/GenBank/DDBJ databases. RN [3] {ECO:0000313|EMBL:KLU83461.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=ATCC 64411 {ECO:0000313|EMBL:KLU83461.1}; RA Ma L.-J., Dead R., Young S.K., Zeng Q., Gargeya S., Fitzgerald M., RA Haas B., Abouelleil A., Alvarado L., Arachchi H.M., Berlin A., RA Brown A., Chapman S.B., Chen Z., Dunbar C., Freedman E., Gearin G., RA Gellesch M., Goldberg J., Griggs A., Gujja S., Heiman D., Howarth C., RA Larson L., Lui A., MacDonald P.J.P., Mehta T., Montmayeur A., RA Murphy C., Neiman D., Pearson M., Priest M., Roberts A., Saif S., RA Shea T., Shenoy N., Sisk P., Stolte C., Sykes S., Yandava C., RA Wortman J., Nusbaum C., Birren B.; RT "Annotation of Magnaporthe poae ATCC 64411."; RL Submitted (MAR-2011) to the EMBL/GenBank/DDBJ databases. RN [4] {ECO:0000313|EnsemblFungi:MAPG_02521T0} RP IDENTIFICATION. RC STRAIN=ATCC 64411 {ECO:0000313|EnsemblFungi:MAPG_02521T0}; RG EnsemblFungi; RL Submitted (JUN-2015) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ADBL01000627; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; GL876967; KLU83461.1; -; Genomic_DNA. DR EnsemblFungi; MAPG_02521T0; MAPG_02521T0; MAPG_02521. DR Proteomes; UP000011715; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:KLU83461.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000011715}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:KLU83461.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:KLU83461.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:KLU83461.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000011715}. FT DOMAIN 7 289 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 255 297 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 792 AA; 90860 MW; 7A4C1356695A62BF CRC64; MLFYIDDLPV IFPYPRIYPE QYAYMCDLKR TLDAGGNCVL EMPSGTGKTA TLLSLIVAYQ QHNPEHRKLI YCSRTMSEIE KALAELRALM KYRAEQLGKE EDFRGLGLTS RKNLCLHPAV KREKSGAIVD ARCRSLTAGF IKEKKDKGED VEVCIYHDNL DVLEPHNLIP NGVWTFDGLL RYGEQHKQCP YFTARRMMQY CNVIIYSYHY LLDPKIAERV SKELSRDSII VFDEAHNIDN VCIESLSTDL TEDSLRKATR GAQNLENRIK QMRETDQKQL EDEYQKLVAG LRDADEARQE DAFMANPVLP DDLIREAVPG NIRRAEHFVA FLKRFIEYLK TRLKVLEVIS ETPPSFLAHL KEYTFIEKKP LRFCAERLTS LVRTLELTNI EDFQPLQEVA TFATLVATYE KGFLLLLEPY ETAKSKVVNP VLHFTCLDAA IAIKPVFERF RTVIITSGTL SPLEMYPKML GFDAVVQESY SMTLGRRSFL PMIVTKGSDQ AAISSSFAVR TDLPVVRNYG NLLTEFAKIT PDGMVVFFPS YFYMESIISM WQGMNILEEV WKYKLILVET PDAQETAVAL ETYRTACCNG TGAVMFCVAR GKVSEGIDFD HQYGRAVLCI GVPYQYTESL ILKARLDFLR ETYRIKENDF LSFDAMRHAA QCLGRVLRGK DDYGIMVLAD RRFPKKRNQL PKWINQALLE SDTNLSTDMA VSSAKKFLKT MAQPFRPKDQ EGVSMWTLED LKRHQAQEET RQIRELQGRP GHAAHVHGSR VDGEDDYEMD EDEERDMMEL DA // ID A0A0C4EUP4_PUCT1 Unreviewed; 759 AA. AC A0A0C4EUP4; DT 01-APR-2015, integrated into UniProtKB/TrEMBL. DT 01-APR-2015, sequence version 1. DT 11-MAY-2016, entry version 12. DE SubName: Full=Uncharacterized protein {ECO:0000313|EnsemblFungi:PTTG_04525P0}; GN Name=PTTG_04525 {ECO:0000313|EnsemblFungi:PTTG_04525P0}; OS Puccinia triticina (isolate 1-1 / race 1 (BBBD)) (Brown leaf rust OS fungus). OC Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; OC Pucciniomycetes; Pucciniales; Pucciniaceae; Puccinia. OX NCBI_TaxID=630390 {ECO:0000313|EnsemblFungi:PTTG_04525P0, ECO:0000313|Proteomes:UP000005240}; RN [1] {ECO:0000313|EnsemblFungi:PTTG_04525P0} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=isolate 1-1 / race 1 (BBBD) RC {ECO:0000313|EnsemblFungi:PTTG_04525P0}; RG The Broad Institute Genome Sequencing Platform; RA Cuomo C., Fellers J., Bakkeren G., Szabo L., Young S., Zeng Q., RA Koehrsen M., Alvarado L., Berlin A.M., Borenstein D., Chapman S.B., RA Chen Z., Engels R., Freedman E., Gellesch M., Goldberg J., Griggs A., RA Gujja S., Heilman E.R., Heiman D.I., Hepburn T.A., Howarth C., Jen D., RA Larson L., Lewis B., Mehta T., Park D., Pearson M., Richards J., RA Roberts A., Saif S., Shea T.D., Shenoy N., Sisk P., Stolte C., RA Sykes S.N., Walk T., White J., Yandava C., Haas B., Nusbaum C., RA Birren B.; RT "The genome sequence of Puccinia triticina 1-1 BBBD race 1."; RL Submitted (NOV-2009) to the EMBL/GenBank/DDBJ databases. RN [2] {ECO:0000313|EnsemblFungi:PTTG_04525P0} RP IDENTIFICATION. RC STRAIN=isolate 1-1 / race 1 (BBBD) RC {ECO:0000313|EnsemblFungi:PTTG_04525P0}; RG EnsemblFungi; RL Submitted (JUN-2015) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ADAS01004189; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EnsemblFungi; PTTG_04525T0; PTTG_04525P0; PTTG_04525. DR Proteomes; UP000005240; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000005240}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000005240}. FT DOMAIN 1 241 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 759 AA; 85514 MW; BD2876244EFCF530 CRC64; MPSGTGKTIS LLSLIVAYQL YYPERRKLVY CSRTVPEIEK ALIELKRLMA YRAAQHRLRA GLTDSSAPTN EDDFLGVSRE KKGKVVDARC RDLTSAWACE KGRADPGSVP LCDFHEKLGE LEPGNLIPRG VWTLEEITAY GHQHGICPYF AVRRMLAHAD IIIYSFHYLL DPKVATQVSK ELLPNSIVVF DEAHNIDNVC IESLSIDLTR GMLDNAGKSI GALDEKIREI KRTDASKLQN EYERLVRGLG QSEDSLASEE EAAILGNPVL PEDLLQEAVP GNIRRAEHFT AFLNRFVEYL KTRMRVLHVV AETPPSFLQH VKDLTYIDRK PLRFCADRLT SLIRTLELTD LDQYNALQKV ASFATLVATY EKGFLLILEP FETENATVPN PVFHLTCLDA SLAIKPIFER FSSVIITSGT ISPLEMYPKM LGFEATVQES YAMTLTRNCF LPLVITRGSD QVAISSRFEV RNDPSVVRNF GTILIDYCKI VPDGIVAFFP SYLYMESIVA AWHDMGILKE VWKYKLIFVE TPDAVETSIA LENYRRACDN GKGAVLLSVA RGKVSEGIDF DHNYGRAVIM FGIPYQYTES RILKARLEFL RDNYRIREND YLTFDAMRHA AQCVGRVLRG KTDYGLMVFA DKRFAKADKR AKLPKWINSY ITDTASNLST DMAMVISKRF LRSMAQPFEI GQDGISLWGL EDIQRRQAEQ RQADAGAVGD THMAPPRPED DDDEEDYFGG LEDQALLDMR LGPAITSAG // ID A0A0C5VJH7_9GAMM Unreviewed; 758 AA. AC A0A0C5VJH7; DT 29-APR-2015, integrated into UniProtKB/TrEMBL. DT 29-APR-2015, sequence version 1. DT 20-JAN-2016, entry version 7. DE SubName: Full=Rad3-related DNA helicase {ECO:0000313|EMBL:AJQ93553.1}; GN ORFNames=YC6258_01505 {ECO:0000313|EMBL:AJQ93553.1}; OS Gynuella sunshinyii YC6258. OC Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; OC Saccharospirillaceae; Gynuella. OX NCBI_TaxID=1445510 {ECO:0000313|EMBL:AJQ93553.1, ECO:0000313|Proteomes:UP000032266}; RN [1] {ECO:0000313|EMBL:AJQ93553.1, ECO:0000313|Proteomes:UP000032266} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=YC6258 {ECO:0000313|EMBL:AJQ93553.1, RC ECO:0000313|Proteomes:UP000032266}; RA Khan H., Chung E.J., Chung Y.R.; RT "Full genme sequencing of cellulolytic bacterium Gynuella sunshinyii RT YC6258T gen. nov., sp. nov."; RL Submitted (JAN-2014) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP007142; AJQ93553.1; -; Genomic_DNA. DR RefSeq; WP_052830117.1; NZ_CP007142.1. DR EnsemblBacteria; AJQ93553; AJQ93553; YC6258_01505. DR KEGG; gsn:YC6258_01505; -. DR KO; K10844; -. DR Proteomes; UP000032266; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 4. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR001650; Helicase_C. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF00270; DEAD; 1. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. DR PROSITE; PS51194; HELICASE_CTER; 1. PE 4: Predicted; KW ATP-binding {ECO:0000313|EMBL:AJQ93553.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000032266}; KW Helicase {ECO:0000313|EMBL:AJQ93553.1}; KW Hydrolase {ECO:0000313|EMBL:AJQ93553.1}; KW Nucleotide-binding {ECO:0000313|EMBL:AJQ93553.1}; KW Reference proteome {ECO:0000313|Proteomes:UP000032266}. FT DOMAIN 173 423 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT DOMAIN 572 758 Helicase C-terminal. FT {ECO:0000259|PROSITE:PS51194}. SQ SEQUENCE 758 AA; 86991 MW; 91162EDD590BB652 CRC64; MQTVSVRNLA EFCCKSGSLD LRFTPAPSSL EGIEGHKAIY RRRPDNYQSE VSLVYQYQQL LCVRGRADGY DQDRHRIEEI KTYRGQLIRL PDNHRALHWA QARLYAAIYC ELHGHSEIGV ALVYWHVDRQ QESIEEKRFS AEDLKLFLDG CVREFLKWSQ QLEIAMQQRD KLLEQLTFPY PDFRSGQRDF AESVYKAVRL HKNLLIEAPT GIGKTLAALF PALKAMPSDG LDKLVFLTAK TPGRVLVQEA LKKLLLDQSS ILHVVEMKAR DKVCEHPDLA CHGDSCPLAN GFYDRLGEAR QAAFANAWLM ADDVRDIASR FQVCPYYLAQ EMLKWSDVLI ADYNYWFDMS AQIYGLSKAN EWHTGLLIDE AHNLLDRGRS MYSAELSRRE LLAARKIHNH AGKKILERLN RRWLKIEKQW PVGVHITDSL DKELIGCLSR FVSDYSEYLT DEYEHGVLPQ QHLEFYFSVI QFMGVAELFN HHFVMETEVE KTHAAIRLLN QIPAELLKER FAAAQSSVVF SGTLTPFAYF KDTLGLGEDC PVQQISSPFS APQLDVKVIT DISTRYMDRE RSVESVIDII CCQLQKYPGN YLLFFSSFAY LEQVGSRLQN VVKEHRVIRQ AARMSESERT QFMAAFDQKI NTLGLVVLGG AFGEGVDLPG EQLIGAFILT LGLPQLNQRN EALKKNMHQV FGHGYEYAYL FPGLQKVIQA AGRVIRDVND SGYLILIDDR FSRPNVQRLL PDWWHINNVT TQQFLNHH // ID A0A0D1C1C2_USTMA Unreviewed; 850 AA. AC A0A0D1C1C2; DT 29-APR-2015, integrated into UniProtKB/TrEMBL. DT 29-APR-2015, sequence version 1. DT 11-MAY-2016, entry version 11. DE SubName: Full=Chromosome 12, whole genome shotgun sequence {ECO:0000313|EMBL:KIS67647.1}; GN ORFNames=UMAG_04151 {ECO:0000313|EMBL:KIS67647.1}; OS Ustilago maydis (strain 521 / FGSC 9021) (Corn smut fungus). OC Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; OC Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Ustilago. OX NCBI_TaxID=237631 {ECO:0000313|EMBL:KIS67647.1, ECO:0000313|Proteomes:UP000000561}; RN [1] {ECO:0000313|EMBL:KIS67647.1, ECO:0000313|Proteomes:UP000000561} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=521 / FGSC 9021 {ECO:0000313|Proteomes:UP000000561}; RX PubMed=17080091; DOI=10.1038/nature05248; RA Kaemper J., Kahmann R., Boelker M., Ma L.-J., Brefort T., RA Saville B.J., Banuett F., Kronstad J.W., Gold S.E., Mueller O., RA Perlin M.H., Woesten H.A.B., de Vries R., Ruiz-Herrera J., RA Reynaga-Pena C.G., Snetselaar K., McCann M., Perez-Martin J., RA Feldbruegge M., Basse C.W., Steinberg G., Ibeas J.I., Holloman W., RA Guzman P., Farman M.L., Stajich J.E., Sentandreu R., RA Gonzalez-Prieto J.M., Kennell J.C., Molina L., Schirawski J., RA Mendoza-Mendoza A., Greilinger D., Muench K., Roessel N., Scherer M., RA Vranes M., Ladendorf O., Vincon V., Fuchs U., Sandrock B., Meng S., RA Ho E.C.H., Cahill M.J., Boyce K.J., Klose J., Klosterman S.J., RA Deelstra H.J., Ortiz-Castellanos L., Li W., Sanchez-Alonso P., RA Schreier P.H., Haeuser-Hahn I., Vaupel M., Koopmann E., Friedrich G., RA Voss H., Schlueter T., Margolis J., Platt D., Swimmer C., Gnirke A., RA Chen F., Vysotskaia V., Mannhaupt G., Gueldener U., RA Muensterkoetter M., Haase D., Oesterheld M., Mewes H.-W., RA Mauceli E.W., DeCaprio D., Wade C.M., Butler J., Young S.K., RA Jaffe D.B., Calvo S.E., Nusbaum C., Galagan J.E., Birren B.W.; RT "Insights from the genome of the biotrophic fungal plant pathogen RT Ustilago maydis."; RL Nature 444:97-101(2006). RN [2] {ECO:0000313|Proteomes:UP000000561} RP GENOME REANNOTATION. RC STRAIN=521 / FGSC 9021 {ECO:0000313|Proteomes:UP000000561}; RA Gueldener U., Muensterkoetter M., Walter M.C., Mannhaupt G., RA Kahmann R.; RL Submitted (SEP-2014) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CM003151; KIS67647.1; -; Genomic_DNA. DR RefSeq; XP_011390642.1; XM_011392340.1. DR GeneID; 23564413; -. DR KEGG; uma:UMAG_04151; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR Proteomes; UP000000561; Chromosome 12. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000000561}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000000561}. FT DOMAIN 7 319 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 850 AA; 97080 MW; 45413611B59E3867 CRC64; MKFYIDELPV LFPYPKIYPE QYAYMTDLKR TLDANGHCVL EMPSGTGKTV SLLSLIVSYQ QFHPAKRKLI YCSRTVPEIE KALAELKRLM EYRARYNVQQ DQASGVLKKE SQSSDRPGEH NIEMNGKGNT GSQMEDILAL GLSSRKNLCI HPDVSRERKG KVVDARCRDM TSSWACEKGR QDPGSVELCN FHEELGKMEP GQLIPQGVWT LEEVKEYARE KAICPYFAIR RMMPFVDIII YSFHYLLDPK VAEQVSKEMS KDAIVVFDEA HNIDNVCIES LSIDLTRPML DSAYRSINQL SERVDEIKKT DASKLQDEYA RLVEGLQQQG EQREAESFMA NPVLPDDLLQ EAVPGNIRRA EHFVAFLKRF VEYLKTRMRV LHVVAETPAS FLQHLKDITY IERKPLRFCA ERLRMLVGTL ELTRLDEFSA LQKVAAFATL VATYDKGFLL ILEPFETENA TVPNPIFHFT CLDASLAIAP VFERFSSVII TSGTISPLDM YPKMLKFDAI VQESYAMTLT RQCFLPLVIT RGSDQVAISS RFEVRNDPAV VRNYGSILIE YAKCVPDGIV AFFPSYLYME SIVAAWHDMG ILDEVWKYKL IFIETPDAPE TSIALENYRR ACDNGRGAIL LSVARGKVSE GIDFDHNYGR AVIMFGVPYQ YTESRILKAR LEFLRDNFRI RENDFLTFDA MRHAAQCVGR VLRGKTDYGL MVFADKRFAR ADKRNKLPKW IAQYIKETHS NLSTDMAIVE SKLFIRSMAQ PYPEGKNGVS LWELADIESR QAKERETFAK LMRGQLTVDA SGQVVGKDDT DSDTHVVERD RQDEDDDFDR EFGEGDELVQ MDVDSVIQQA // ID A0A0D2X167_CAPO3 Unreviewed; 771 AA. AC A0A0D2X167; DT 29-APR-2015, integrated into UniProtKB/TrEMBL. DT 29-APR-2015, sequence version 1. DT 11-MAY-2016, entry version 9. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KJE90279.1}; GN ORFNames=CAOG_008527 {ECO:0000313|EMBL:KJE90279.1}; OS Capsaspora owczarzaki (strain ATCC 30864). OC Eukaryota; Ichthyosporea; Capsaspora. OX NCBI_TaxID=595528 {ECO:0000313|EMBL:KJE90279.1, ECO:0000313|Proteomes:UP000008743}; RN [1] {ECO:0000313|Proteomes:UP000008743} RP NUCLEOTIDE SEQUENCE. RC STRAIN=ATCC 30864 {ECO:0000313|Proteomes:UP000008743}; RA Russ C., Cuomo C., Burger G., Gray M.W., Holland P.W.H., King N., RA Lang F.B.F., Roger A.J., Ruiz-Trillo I., Young S.K., Zeng Q., RA Gargeya S., Alvarado L., Berlin A., Chapman S.B., Chen Z., RA Freedman E., Gellesch M., Goldberg J., Griggs A., Gujja S., RA Heilman E., Heiman D., Howarth C., Mehta T., Neiman D., Pearson M., RA Roberts A., Saif S., Shea T., Shenoy N., Sisk P., Stolte C., Sykes S., RA White J., Yandava C., Haas B., Nusbaum C., Birren B.; RT "The Genome Sequence of Capsaspora owczarzaki ATCC 30864."; RL Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; KE346361; KJE90279.1; -; Genomic_DNA. DR RefSeq; XP_011270108.1; XM_011271806.1. DR EnsemblProtists; KJE90279; KJE90279; CAOG_008527. DR GeneID; 23301924; -. DR Proteomes; UP000008743; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000008743}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000008743}. FT DOMAIN 7 284 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 771 AA; 87304 MW; CC80DFC7881FCD46 CRC64; MKINVDGLLV YFPFDYIYPE QYEYMLELKR SIDAKGHCVL EMPSGTGKTI SLLSLIISHQ MVNPQMGKLI YCSRTVPEIE KVLDEMTKLV AYIESETGQR LKFLGLGLSA RKNMCIHPEV SKERDGKLVD SKCRELTASW VRTRAENNSE VELCSFYEEF DRSGREALLP AGVYTLDELR AFGQRQNWCP YYLARHMISF ANVIVYSYHY LLDPKIANLV SKELAKESVV VFDEAHNIDN VCIESMSVEI TKRTLDNSTR NLNALASTIS EIKQTDTARL QDEYTRLVQG LREANTARET DLVLANPVLP DEIMQEAVPG TIRRAEHFVA FLRRFVEYLK NRLRVQHVVA ENPTSFLQDL YQAVQIDRKP LRFCAERLGS LVRTLELPNM DDFSALVTVA NFATLVSTYA KGFSLIIEPF DDRTPTIPNP VLYFSCMDAS LAIKPIFDRF QTVVITSGTL SPIEMYPKIL NFQPVTAQSF TMTLSRNCVC PVIVTRGSDQ VAVSSRFQVR DDPAVVRNYG SLLVDLSAVV PDGLVCFFPS YTYMESIVAK WHEQGVLTNL LRNKLVFIET QDGAETSIAL DNYQKACENG RGAVLLSVAR GKVSEGIDFD HHYGRAVILF GIPYVYTESR ILRARLDYLR EQFQIREGDF LTFDALRHGA QCVGRAIRGK SDYGMMIFAD KRFARLDKKG KLPKWIQQYM TDDLCNLSVD EAVQVAKRFL RNMAQPFNKD DQLGLSLLTL EQVEARAKRL SATTQHAVPS TSSAPAPMSI D // ID A0A0D2YCB6_FUSO4 Unreviewed; 748 AA. AC A0A0D2YCB6; DT 29-APR-2015, integrated into UniProtKB/TrEMBL. DT 29-APR-2015, sequence version 1. DT 11-MAY-2016, entry version 11. DE SubName: Full=Uncharacterized protein {ECO:0000313|EnsemblFungi:FOXG_13947P0}; GN Name=FOXG_13947 {ECO:0000313|EnsemblFungi:FOXG_13947P0}; OS Fusarium oxysporum f. sp. lycopersici (strain 4287 / CBS 123668 / FGSC OS 9935 / NRRL 34936) (Fusarium vascular wilt of tomato). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; OC Sordariomycetes; Hypocreomycetidae; Hypocreales; Nectriaceae; OC Fusarium; Fusarium oxysporum species complex. OX NCBI_TaxID=426428 {ECO:0000313|EnsemblFungi:FOXG_13947P0, ECO:0000313|Proteomes:UP000009097}; RN [1] {ECO:0000313|EnsemblFungi:FOXG_13947P0, ECO:0000313|Proteomes:UP000009097} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=4287 / CBS 123668 / FGSC 9935 / NRRL 34936 RC {ECO:0000313|EnsemblFungi:FOXG_13947P0, RC ECO:0000313|Proteomes:UP000009097}; RX PubMed=20237561; DOI=10.1038/nature08850; RA Ma L.-J., van der Does H.C., Borkovich K.A., Coleman J.J., RA Daboussi M.-J., Di Pietro A., Dufresne M., Freitag M., Grabherr M., RA Henrissat B., Houterman P.M., Kang S., Shim W.-B., Woloshuk C., RA Xie X., Xu J.-R., Antoniw J., Baker S.E., Bluhm B.H., Breakspear A., RA Brown D.W., Butchko R.A.E., Chapman S., Coulson R., Coutinho P.M., RA Danchin E.G.J., Diener A., Gale L.R., Gardiner D.M., Goff S., RA Hammond-Kosack K.E., Hilburn K., Hua-Van A., Jonkers W., Kazan K., RA Kodira C.D., Koehrsen M., Kumar L., Lee Y.-H., Li L., Manners J.M., RA Miranda-Saavedra D., Mukherjee M., Park G., Park J., Park S.-Y., RA Proctor R.H., Regev A., Ruiz-Roldan M.C., Sain D., Sakthikumar S., RA Sykes S., Schwartz D.C., Turgeon B.G., Wapinski I., Yoder O., RA Young S., Zeng Q., Zhou S., Galagan J., Cuomo C.A., Kistler H.C., RA Rep M.; RT "Comparative genomics reveals mobile pathogenicity chromosomes in RT Fusarium."; RL Nature 464:367-373(2010). RN [2] {ECO:0000313|EnsemblFungi:FOXG_13947P0} RP IDENTIFICATION. RC STRAIN=4287 / CBS 123668 / FGSC 9935 / NRRL 34936 RC {ECO:0000313|EnsemblFungi:FOXG_13947P0}; RG EnsemblFungi; RL Submitted (MAR-2015) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EnsemblFungi; FOXG_13947T0; FOXG_13947P0; FOXG_13947. DR OMA; DEVWKYK; -. DR Proteomes; UP000009097; Chromosome 10. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000009097}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000009097}. FT DOMAIN 1 241 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 214 256 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 748 AA; 86281 MW; 72C354F5EEC00051 CRC64; MPSGTGKTVS LLSLIVAYQQ YMPEKRKLIY CSRTMSEIEK ALVELKSLMK YRAEQLGYEE EFRGLGLTSR KNLCLHPSVK REKSGAIVDA RCRSLTAGFV KEKKERGENV DVCVYHDNLD LLEPHNLIPN GVWSFDDMIR YGEEHKQCPY FTARRMMQYC NVVIFSYHYL LDPKIAERVS KDFSKDCIVV FDEAHNIDNV CIESLSTDIT EDSLRKATRG AQNLENKISQ MRDTDQQQLQ NEYEKLVQGL RDADEARQED AFMANPALPE DLLKEAVPGN IRRAEHFIAF LKRFIEYLKT RMKVRQVISE TPPSFLAHLR EHTFIEKKPL RFCAERLTSL VRTLELTNIE DYQPLQEVAT FATLVATYEK GFLLILEPFE SDTAEVPNPV LHFTCLDAAI AIKPVFDRFY SVIITSGTIS PLEIYPKMLD FSTVIQESYA MTLARRSFMP MIVTRGSDQA SVSTSFQVRN EPSVVRNYGN LLTEFAKITP DGMVVFFPSY LYMESIISMW QGMGILDEVW KYKLILVETP DAQETSLALE TYRTACCNGR GAVLLCVARG KVSEGIDFDH QYGRTVLCIG VPFQYTESRI LKARLQFLRE TYRIKENDFL SFDAMRHAAQ CLGRVLRGKD DYGIMVLADR RFQKKRSQLP KWINQGLQES DVNLSTDMAV SSARRFLRTM AQPFRAKDQE GISTWGYKDL MEHKEKMDLE RIKELEEEAQ RPKPAAQDNN FEYHDDEFDQ DMMEMDGF // ID A0A0D3DIM4_BRAOL Unreviewed; 758 AA. AC A0A0D3DIM4; DT 29-APR-2015, integrated into UniProtKB/TrEMBL. DT 29-APR-2015, sequence version 1. DT 11-MAY-2016, entry version 11. DE SubName: Full=Uncharacterized protein {ECO:0000313|EnsemblPlants:Bo8g001320.1}; GN Name=ATXPD {ECO:0000313|EnsemblPlants:Bo8g001320.1}; OS Brassica oleracea var. oleracea. OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; OC Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; OC Brassica. OX NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo8g001320.1, ECO:0000313|Proteomes:UP000032141}; RN [1] {ECO:0000313|EnsemblPlants:Bo8g001320.1, ECO:0000313|Proteomes:UP000032141} RP NUCLEOTIDE SEQUENCE. RC STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141}; RX PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77; RA Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E., RA Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., RA Belcram H., Links M.G., Just J., Clarke C., Bender T., Huebert T., RA Mason A.S., Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., RA Batley J., Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., RA Bancroft I., Chalhoub B., Sharpe A.G.; RT "Transcriptome and methylome profiling reveals relics of genome RT dominance in the mesopolyploid Brassica oleracea."; RL Genome Biol. 15:R77-R77(2014). RN [2] {ECO:0000313|EnsemblPlants:Bo8g001320.1} RP IDENTIFICATION. RG EnsemblPlants; RL Submitted (MAR-2015) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR RefSeq; XP_013604908.1; XM_013749454.1. DR RefSeq; XP_013604909.1; XM_013749455.1. DR EnsemblPlants; Bo8g001320.1; Bo8g001320.1; Bo8g001320. DR GeneID; 106312075; -. DR Gramene; Bo8g001320.1; Bo8g001320.1; Bo8g001320. DR OMA; DEVWKYK; -. DR Proteomes; UP000032141; Chromosome C8. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0000724; P:double-strand break repair via homologous recombination; IEA:EnsemblPlants. DR GO; GO:0010286; P:heat acclimation; IEA:EnsemblPlants. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR GO; GO:0045893; P:positive regulation of transcription, DNA-templated; IEA:EnsemblPlants. DR GO; GO:0043687; P:post-translational protein modification; IEA:EnsemblPlants. DR GO; GO:0006457; P:protein folding; IEA:EnsemblPlants. DR GO; GO:0009644; P:response to high light intensity; IEA:EnsemblPlants. DR GO; GO:0042542; P:response to hydrogen peroxide; IEA:EnsemblPlants. DR GO; GO:0010212; P:response to ionizing radiation; IEA:EnsemblPlants. DR GO; GO:0009411; P:response to UV; IEA:EnsemblPlants. DR GO; GO:0000394; P:RNA splicing, via endonucleolytic cleavage and ligation; IEA:EnsemblPlants. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:EnsemblPlants. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000032141}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000032141}. FT DOMAIN 7 285 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 758 AA; 86058 MW; 57A25BF5CFED1C9D CRC64; MIFKIEDVTV YFPYDNIYPE QYEYMVELKR ALDAKGHCLL EMPTGTGKTI ALLSLITSYR LSRPDSPIKL VYCTRTVHEM EKTLGELKIL HDYQLTHLGA QAKILALGLS SRKNLCVNSK VLAAENRDSV DAACRKRTAS WVRALAAENP NVQLCDYFES YEKAADNALL PPGVYTLEDL RAFGKNRGWC PYFLARHMVQ FANVIVYSYQ YLLDPKVAGI ISKELQKESV IVFDEAHNID NVCIEALSVS VRRVTLEGAN RNLNKIRQEI DRFKATDAGR LRAEYNRLIE GLALRGDLSG TDQWLANPAL PNDILKEAVP GNIRRAEHFV HVLRRLLQYL GGRLDTENVE KESPVSFVSS LNSQAGIEQK TLKFCYDRLH SLMMTLEITD TDEFLPIQTV CDFATLVGTY ARGFSIIIEP YDERMPHIPD PILQLSCHDA SLAIKPVFDR FQSVVITSGT LSPIDLYPRL LSFNPVVSRS FKMSMTRDCI CPMVLTRGSD QLPVSTKFDM RSDPGVVRNY GKLLVEMVSV VPDGVVCFFV SYSYMDGIIA TWNETGILKE ITQQKLVFFE TQDVVETTLA LDNYRRACDC GRGAVFFSVA RGKVAEGIDF DRHYGRLVVM FGVPFQYTLS KILLARLEYL RDTFQIKEGD FLTFDALRQA AQCVGRVIRS KADYGMMIFA DKRYSRHDKR SKLPGWILSH LRDAHLNLST DMAIHIAREF LRKMAQPYDK TGTMGRKTLL TQEDLEKMAE TGVQDMVY // ID A0A0D3G350_9ORYZ Unreviewed; 679 AA. AC A0A0D3G350; DT 29-APR-2015, integrated into UniProtKB/TrEMBL. DT 29-APR-2015, sequence version 1. DT 11-MAY-2016, entry version 10. DE SubName: Full=Uncharacterized protein {ECO:0000313|EnsemblPlants:OBART05G03020.1}; OS Oryza barthii. OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza. OX NCBI_TaxID=65489 {ECO:0000313|EnsemblPlants:OBART05G03020.1, ECO:0000313|Proteomes:UP000026960}; RN [1] {ECO:0000313|EnsemblPlants:OBART05G03020.1, ECO:0000313|Proteomes:UP000026960} RP NUCLEOTIDE SEQUENCE. RA Rounsley S., Marri P.R., Yu Y., He R., Sisneros N., Goicoechea J.L., RA Lee S.J., Angelova A., Kudrna D., Luo M., Affourtit J., Desany B., RA Knight J., Niazi F., Egholm M., Wing R.A.; RT "De Novo Next Generation Sequencing of Plant Genomes."; RL Submitted (JUL-2008) to the EMBL/GenBank/DDBJ databases. RN [2] {ECO:0000313|Proteomes:UP000026960} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RX DOI=10.1007/s12284-009-9025-z; RA Rounsley S., Marri P.R., Yu Y., He R., Sisneros N., Goicoechea J.L., RA Lee S.J., Angelova A., Kudrna D., Luo M., Affourtit J., Desany B., RA Knight J., Niazi F., Egholm M., Wing R.A.; RT "De novo next generation sequencing of plant genomes."; RL Rice 2:35-43(2009). RN [3] {ECO:0000313|EnsemblPlants:OBART05G03020.1} RP IDENTIFICATION. RG EnsemblPlants; RL Submitted (MAR-2015) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EnsemblPlants; OBART05G03020.1; OBART05G03020.1; OBART05G03020. DR Gramene; OBART05G03020.1; OBART05G03020.1; OBART05G03020. DR Proteomes; UP000026960; Chromosome 5. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0000724; P:double-strand break repair via homologous recombination; IEA:EnsemblPlants. DR GO; GO:0010286; P:heat acclimation; IEA:EnsemblPlants. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR GO; GO:0045893; P:positive regulation of transcription, DNA-templated; IEA:EnsemblPlants. DR GO; GO:0043687; P:post-translational protein modification; IEA:EnsemblPlants. DR GO; GO:0006457; P:protein folding; IEA:EnsemblPlants. DR GO; GO:0009644; P:response to high light intensity; IEA:EnsemblPlants. DR GO; GO:0042542; P:response to hydrogen peroxide; IEA:EnsemblPlants. DR GO; GO:0010212; P:response to ionizing radiation; IEA:EnsemblPlants. DR GO; GO:0009411; P:response to UV; IEA:EnsemblPlants. DR GO; GO:0000394; P:RNA splicing, via endonucleolytic cleavage and ligation; IEA:EnsemblPlants. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:EnsemblPlants. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 3. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000026960}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000026960}. FT DOMAIN 1 209 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 679 AA; 76734 MW; AB308314F6AB74D3 CRC64; MEKTLAELRL LFAHLPAAAS RSLLALGLSS RKNLCVHPQA SAAAARDSVD TACRRLTASW VRDRAASDPD STPLCDFFES FDRAAAAGDL ASYMPPGVYT LADLRALGRD RGICPYFLAR QMVKYANVVV YSYQYLIDPK VASIVSREMQ KECVVVFDEA HNIDNVCIEA LSVSIRKQTL EGAERNLRRI SQEIDRFKAT DANRLRAEYN RLVDGLAQRG NLPISDAWLA NPALPEDILK EAVPGNIRRA EHFLAVLRRL VRFLDGRLET ENVENEMPVA FVASIHSQAG IDQKMLRFCY DRLHSLMLTL EITDTDEFMH IQTICDFATL IGTYTRGFSI IIEPYDERMP DIRDPVIQLS CHDASLAIQP VFERFQTVVI TSGTLSPIDL YPRLLNFNPV ISRSFTMSLT RDCICPMVLT RGSDQLPVST KFDMRSDPGV VRNYGRLLLE MASAVPDGIV CFFVSYSYMD GIVNSWNEMG ILQDIMQHKL VFIETPDVVE TTLALDNYRK ACDCGRGAIF FSVARGKVAE GIDFDRHYGR LVIMFGVPFQ YTLSRILLAR LEYLRETFQI KEGDFLTFDA LRQAAQCVGR VIRSKADYGM MIFADKRYSR HDKRSKLPGW ILSHLHDAHL NLSTDMALHI AREFLRRMAQ PYDKTGSGGN KTLLTEEDLQ NMAQDAMEM // ID A0A0D9S1W5_CHLSB Unreviewed; 736 AA. AC A0A0D9S1W5; DT 27-MAY-2015, integrated into UniProtKB/TrEMBL. DT 27-MAY-2015, sequence version 1. DT 11-MAY-2016, entry version 10. DE SubName: Full=Uncharacterized protein {ECO:0000313|Ensembl:ENSCSAP00000014854}; GN Name=ERCC2 {ECO:0000313|Ensembl:ENSCSAP00000014854}; OS Chlorocebus sabaeus (Green monkey) (Cercopithecus sabaeus). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; OC Catarrhini; Cercopithecidae; Cercopithecinae; Chlorocebus. OX NCBI_TaxID=60711 {ECO:0000313|Ensembl:ENSCSAP00000014854, ECO:0000313|Proteomes:UP000029965}; RN [1] {ECO:0000313|Ensembl:ENSCSAP00000014854, ECO:0000313|Proteomes:UP000029965} RP NUCLEOTIDE SEQUENCE. RA Warren W., Wilson R.K.; RL Submitted (MAR-2014) to the EMBL/GenBank/DDBJ databases. RN [2] {ECO:0000313|Ensembl:ENSCSAP00000014854} RP IDENTIFICATION. RG Ensembl; RL Submitted (APR-2015) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an Ensembl CC automatic analysis pipeline and should be considered as CC preliminary data. {ECO:0000313|Ensembl:ENSCSAP00000014854}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AQIB01135922; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR Ensembl; ENSCSAT00000001220; ENSCSAP00000014854; ENSCSAG00000003189. DR GeneTree; ENSGT00550000075092; -. DR OMA; DEVWKYK; -. DR Proteomes; UP000029965; Chromosome 6. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000029965}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000029965}. FT DOMAIN 1 259 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 53 76 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 736 AA; 83949 MW; 7BC5D2E2537DAE5A CRC64; MRELKRTLDA KGHGVLEMPS GTGKTVSLLA LIMAYQRAYP LEVTKLIYCS RTVPEIEKVI EELRKLLNFY EKQEGEKLPF LGLALSSRKN LCIHPEVTPL RFGKDVDGKC HSLTASYVRA QYQHDTSLPH CRFYEEFDAH GREVPLPAGI YNLDDLKALG RRQGWCPYFL ARYSILHANV VVYSYHYLLD PKIADLVSKE LARKAVVVFD EAHNIDNVCI DSMSVNLTRR TLDRCQGNLE TLQKTVLRIK ETDEQRLRDE YRRLVEGLRE ASAARETDAH LANPVLPDEV LQEAVPGSIR TAEHFLGFLR RLLEYVKWRL RVQHVVQESP PAFLSGLAQR VCIQRKPLRF CAERLRSLLH TLEITDLADF SPLTLLANFA TLVSTYAKGF TIIIEPFDDR TPTIANPILH FSCMDASLAI KPVFERFQSV IITSGTLSPL DIYPKILDFH PVTMATFTMT LARVCLCPMI IGRGNDQVAI SSKFETREDI AVIRNYGNLL LEMSAVVPDG IVAFFTSYQY MESTVASWYE QGILENIQRN KLLFIETQDG AETSVALEKY QEACENGRGA ILLSVARGKV SEGIDFVHHY GRAVIMFGVP YVYTQSRILK ARLEYLRDQF QIRENDFLTF DAMRHAAQCV GRAIRGKTDY GLMVFADKRF ARGDKRGKLP RWIQEHLTDA NLNLTVDEGV QVAKYFLRQM AQPFHREDQL GLSLLSLEQL ESEETLQRIE QIAQQL // ID A0PXD1_CLONN Unreviewed; 784 AA. AC A0PXD1; DT 09-JAN-2007, integrated into UniProtKB/TrEMBL. DT 09-JAN-2007, sequence version 1. DT 11-MAY-2016, entry version 55. DE SubName: Full=DNA repair helicase, truncation, putative {ECO:0000313|EMBL:ABK61298.1}; GN OrderedLocusNames=NT01CX_0936 {ECO:0000313|EMBL:ABK61298.1}; OS Clostridium novyi (strain NT). OC Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; OC Clostridium. OX NCBI_TaxID=386415 {ECO:0000313|EMBL:ABK61298.1, ECO:0000313|Proteomes:UP000008220}; RN [1] {ECO:0000313|EMBL:ABK61298.1, ECO:0000313|Proteomes:UP000008220} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=NT {ECO:0000313|EMBL:ABK61298.1, RC ECO:0000313|Proteomes:UP000008220}; RX PubMed=17115055; DOI=10.1038/nbt1256; RA Bettegowda C., Huang X., Lin J., Cheong I., Kohli M., Szabo S.A., RA Zhang X., Diaz L.A. Jr., Velculescu V.E., Parmigiani G., Kinzler K.W., RA Vogelstein B., Zhou S.; RT "The genome and transcriptomes of the anti-tumor agent Clostridium RT novyi-NT."; RL Nat. Biotechnol. 24:1573-1580(2006). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000382; ABK61298.1; -; Genomic_DNA. DR RefSeq; WP_011721054.1; NC_008593.1. DR STRING; 386415.NT01CX_0936; -. DR EnsemblBacteria; ABK61298; ABK61298; NT01CX_0936. DR KEGG; cno:NT01CX_0936; -. DR PATRIC; 19477534; VBICloNov112828_0060. DR eggNOG; ENOG4107QX6; Bacteria. DR eggNOG; COG1199; LUCA. DR HOGENOM; HOG000183657; -. DR KO; K10844; -. DR OMA; DYNYYFD; -. DR OrthoDB; EOG61P6NQ; -. DR BioCyc; CNOV386415:GH98-69-MONOMER; -. DR Proteomes; UP000008220; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 4. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR001650; Helicase_C. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. DR PROSITE; PS51194; HELICASE_CTER; 1. PE 4: Predicted; KW ATP-binding {ECO:0000313|EMBL:ABK61298.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000008220}; KW Helicase {ECO:0000313|EMBL:ABK61298.1}; KW Hydrolase {ECO:0000313|EMBL:ABK61298.1}; KW Nucleotide-binding {ECO:0000313|EMBL:ABK61298.1}; KW Reference proteome {ECO:0000313|Proteomes:UP000008220}. FT DOMAIN 182 429 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT DOMAIN 594 781 Helicase C-terminal. FT {ECO:0000259|PROSITE:PS51194}. SQ SEQUENCE 784 AA; 91107 MW; 54DFB3C983F8CFEA CRC64; MEDKSTIKVS IRNLVEFILR SGNLVSTFMG SSRNVDAIKA HQKIQKSSGD NYTPEVTLSY IVETEDIVLE VGGRADGIIK EDNNVIIDEI KTTTKPLELI EEDYNILHWA QAKCYGFIYC NDNNLDNIDI QLTYYEMESK DIKRFKRRFS FTELKEFFFD VVDRYIKWAR TLKDFQNIRD ESIKKLTFPF KSYREGQRKF AVGVYKTVAE GKKFFAEAPT GIGKTIATLF PTIKAMEEGY TSKIFYLTAK TITRTAAEKA IENMRNKGLK LKSVTLTAKD KVCFCKEDGC NPEVCQFAQG HFDRINDALS DIYKEDIFSR EVIEKYARKH KVCPFEFSLE LCNFCDCIIC DYNYVFDPRV SLKQFFSEGN GDFTLLVDEG HNLVDRAREM FSSDISKKEV LKLKKDTSKG AKGISKILNK INSYLIDIRK ECEAKDNTLV VKEPPKELIP ILREFTYVCE KWLLENKNAL DGFKESLLEF YFKALGFIRT YECYDERYIT YAEKINDEVF LKMFCLDPSY LLSETMKKCK ATIIFSATLM PMNYYIDILG GTSEDYRVKL SSPFKRENLC VMMDSKISTK YKMREFTYDS VVSDIEAVIS SKVGNYLVFF PSYKYMNEVY DRFIENNQEI NVICQESYMS EEQREEFLEN FCENPKSTLL AFAVMGGLFS EGIDLTHDRL IGSIIVGVGL PQVSLERNII SDYFKKKNGK GFEYSYIYPG MNKVMQSAGR VIRTEEDKGV VLLIDERFRY SSYFKLLPRE WNDIFRVDGK ESIKDKVNDF WNKV // ID A1CP70_ASPCL Unreviewed; 771 AA. AC A1CP70; DT 23-JAN-2007, integrated into UniProtKB/TrEMBL. DT 23-JAN-2007, sequence version 1. DT 11-MAY-2016, entry version 59. DE SubName: Full=TFIIH complex helicase Rad3, putative {ECO:0000313|EMBL:EAW07441.1}; GN ORFNames=ACLA_021550 {ECO:0000313|EMBL:EAW07441.1}; OS Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC OS 3887 / NRRL 1). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; OC Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus. OX NCBI_TaxID=344612 {ECO:0000313|EMBL:EAW07441.1, ECO:0000313|Proteomes:UP000006701}; RN [1] {ECO:0000313|EMBL:EAW07441.1, ECO:0000313|Proteomes:UP000006701} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 RC {ECO:0000313|Proteomes:UP000006701}; RX PubMed=18404212; DOI=10.1371/journal.pgen.1000046; RA Fedorova N.D., Khaldi N., Joardar V.S., Maiti R., Amedeo P., RA Anderson M.J., Crabtree J., Silva J.C., Badger J.H., Albarraq A., RA Angiuoli S., Bussey H., Bowyer P., Cotty P.J., Dyer P.S., Egan A., RA Galens K., Fraser-Liggett C.M., Haas B.J., Inman J.M., Kent R., RA Lemieux S., Malavazi I., Orvis J., Roemer T., Ronning C.M., RA Sundaram J.P., Sutton G., Turner G., Venter J.C., White O.R., RA Whitty B.R., Youngman P., Wolfe K.H., Goldman G.H., Wortman J.R., RA Jiang B., Denning D.W., Nierman W.C.; RT "Genomic islands in the pathogenic filamentous fungus Aspergillus RT fumigatus."; RL PLoS Genet. 4:E1000046-E1000046(2008). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; DS027059; EAW07441.1; -; Genomic_DNA. DR RefSeq; XP_001268867.1; XM_001268866.1. DR ProteinModelPortal; A1CP70; -. DR EnsemblFungi; CADACLAT00002031; CADACLAP00001984; CADACLAG00002031. DR GeneID; 4701077; -. DR KEGG; act:ACLA_021550; -. DR EuPathDB; FungiDB:ACLA_021550; -. DR HOGENOM; HOG000205390; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000006701; Unassembled WGS sequence. DR GO; GO:0000439; C:core TFIIH complex; IEA:EnsemblFungi. DR GO; GO:0005829; C:cytosol; IEA:EnsemblFungi. DR GO; GO:0005675; C:holo TFIIH complex; IEA:EnsemblFungi. DR GO; GO:0000112; C:nucleotide-excision repair factor 3 complex; IEA:EnsemblFungi. DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:EnsemblFungi. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0043141; F:ATP-dependent 5'-3' DNA helicase activity; IEA:EnsemblFungi. DR GO; GO:0003684; F:damaged DNA binding; IEA:EnsemblFungi. DR GO; GO:0000717; P:nucleotide-excision repair, DNA duplex unwinding; IEA:EnsemblFungi. DR GO; GO:0033683; P:nucleotide-excision repair, DNA incision; IEA:EnsemblFungi. DR GO; GO:0070816; P:phosphorylation of RNA polymerase II C-terminal domain; IEA:EnsemblFungi. DR GO; GO:0045951; P:positive regulation of mitotic recombination; IEA:EnsemblFungi. DR GO; GO:0010525; P:regulation of transposition, RNA-mediated; IEA:EnsemblFungi. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:EnsemblFungi. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EAW07441.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000006701}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EAW07441.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EAW07441.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EAW07441.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000006701}. FT DOMAIN 1 271 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 224 276 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 771 AA; 87988 MW; B8E824C3D848188B CRC64; MCDLKKTLDA QGNCVLEMPS GTGKTVTLLS LIVAYQQHYP EHRKLIYCSR TMSEIEKALA ELKELMKYRT QQLGYTEDFR ALGLTSRKNL CLHPSVKREK SGAVVDARCR SLTAGFVKEK KERGEDVELC IYHENLDLLE PHNLVPPGVF TLDGLLKYGE EHKQCPYFSA RRMMPYCNVI IYSYHYLLDP KIAERVSREL SKDCIVVFDE AHNIDNVCIE ALSIDITEDS LRKATKGANN LERKIQEMKS SDAEKLQNEY SKLVEGLREA EQAREEEQFI ANPVLPDDLL KEAVPGNIRR AEHFVAFLKR FIEYLKTRMK VTHTISETPP SFLTHVKDLT FIERKPLRFC AERLTSLVRT LELINIEDYQ PLQEVATFAT LVATYEKGFL LILEPFESEA ATVPNPILHF TCLDASIAIK PVFDRFSSVI ITSGTLSPLE MYPKMLDFDT VLQESYSMTL ARRSFLPMIV TRGSDQAQIS SSFQIRNDPG VVRNYGNLVL EFSRITPDGI VVFFPSYLYM ESIVSMWQGM GILDSIWNYK LILVETPDAQ ESSLALETYR TACCNGRGAI LFCVARGKVS EGIDFDHHYG RAVLCIGVPF QYTESRILKA RLEFLRENYR IRENDFLSFD AMRHAAQCLG RVLRGKDDYG VMVLADRRFQ KKRNQLPKWI SQAMLESETN LSTDMAVATA KNFLRTMAQP FKAKDQEGIS TWSLADLERH REKQMLEEER VRREVVSNGH TINGATHRGA AAAADEFDDG IDEDLMMLDA Q // ID A1RXF7_THEPD Unreviewed; 588 AA. AC A1RXF7; DT 06-FEB-2007, integrated into UniProtKB/TrEMBL. DT 06-FEB-2007, sequence version 1. DT 11-MAY-2016, entry version 54. DE SubName: Full=DEAD_2 domain protein {ECO:0000313|EMBL:ABL77887.1}; GN OrderedLocusNames=Tpen_0478 {ECO:0000313|EMBL:ABL77887.1}; OS Thermofilum pendens (strain Hrk 5). OC Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermofilaceae; OC Thermofilum. OX NCBI_TaxID=368408 {ECO:0000313|EMBL:ABL77887.1, ECO:0000313|Proteomes:UP000000641}; RN [1] {ECO:0000313|Proteomes:UP000000641} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Hrk 5 {ECO:0000313|Proteomes:UP000000641}; RX PubMed=18263724; DOI=10.1128/JB.01949-07; RA Anderson I., Rodriguez J., Susanti D., Porat I., Reich C., RA Ulrich L.E., Elkins J.G., Mavromatis K., Lykidis A., Kim E., RA Thompson L.S., Nolan M., Land M., Copeland A., Lapidus A., Lucas S., RA Detter C., Zhulin I.B., Olsen G.J., Whitman W., Mukhopadhyay B., RA Bristow J., Kyrpides N.; RT "Genome sequence of Thermofilum pendens reveals an exceptional loss of RT biosynthetic pathways without genome reduction."; RL J. Bacteriol. 190:2957-2965(2008). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000505; ABL77887.1; -; Genomic_DNA. DR STRING; 368408.Tpen_0478; -. DR EnsemblBacteria; ABL77887; ABL77887; Tpen_0478. DR KEGG; tpe:Tpen_0478; -. DR eggNOG; arCOG00770; Archaea. DR eggNOG; COG1199; LUCA. DR KO; K10844; -. DR OMA; SEMIELM; -. DR BioCyc; TPEN368408:GHSG-502-MONOMER; -. DR Proteomes; UP000000641; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW Complete proteome {ECO:0000313|Proteomes:UP000000641}; KW Reference proteome {ECO:0000313|Proteomes:UP000000641}. FT DOMAIN 8 280 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 588 AA; 65448 MW; 3A0F6539518678D4 CRC64; MSEELRAQVE ALIPYKTVRK GQLELALEVA KAYAEKAILL ARYPTGIGKT AAVLAGALAS GAPKVVYLAR SKSQFQAPLR EVKRLLERGI SVPTVVLVNK KNYCLLRGAL PLDYEEFLHF CRVKRFTGAC PYSSEFEDAE IPVLVTPKSA RSLGAKLGVC PFELAWKALR KARLVVASYP YVFREDLRRL LVESLGTPMD VLMLVVDEAH NLPDHIAEST AIAVSDATLR RAISELRAAG IGQELASSLS NLLGYMKRIK GAEEGVRIPL DELTYLVPPA DEVKRVALAL EKLTGMYSSL WQLYAFAEAL RRASHEYLVT AVSSDGSVSL KLVLINPGKV SREVFPKVRS AVLMSSTLMP AEYYVAVLGF PGERVREVSY PFVWSENVDV VIVKGISSRY VERGEELYRR YASAIDYIFE LPSTRRALAI FPSYSFMMGV YPYIRSKPVI IERRDSTIGS MLGKVLELEK ALLLVVARGK FAEGVEFTVL GKSLIDTIVI AGLPVPEPSV ENEKLYELLQ ERLGDRDLAW KYVYLYPAFM QVVQGIGRGV RSEKDKVKVF ILDERMIGEG EKYLSMYGLV PRVGKLPL // ID A1S177_THEPD Unreviewed; 617 AA. AC A1S177; DT 06-FEB-2007, integrated into UniProtKB/TrEMBL. DT 06-FEB-2007, sequence version 1. DT 11-MAY-2016, entry version 58. DE SubName: Full=DEAD_2 domain protein {ECO:0000313|EMBL:ABL79207.1}; GN OrderedLocusNames=Tpen_1812 {ECO:0000313|EMBL:ABL79207.1}; OS Thermofilum pendens (strain Hrk 5). OC Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermofilaceae; OC Thermofilum. OX NCBI_TaxID=368408 {ECO:0000313|EMBL:ABL79207.1, ECO:0000313|Proteomes:UP000000641}; RN [1] {ECO:0000313|Proteomes:UP000000641} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Hrk 5 {ECO:0000313|Proteomes:UP000000641}; RX PubMed=18263724; DOI=10.1128/JB.01949-07; RA Anderson I., Rodriguez J., Susanti D., Porat I., Reich C., RA Ulrich L.E., Elkins J.G., Mavromatis K., Lykidis A., Kim E., RA Thompson L.S., Nolan M., Land M., Copeland A., Lapidus A., Lucas S., RA Detter C., Zhulin I.B., Olsen G.J., Whitman W., Mukhopadhyay B., RA Bristow J., Kyrpides N.; RT "Genome sequence of Thermofilum pendens reveals an exceptional loss of RT biosynthetic pathways without genome reduction."; RL J. Bacteriol. 190:2957-2965(2008). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000505; ABL79207.1; -; Genomic_DNA. DR RefSeq; WP_011753472.1; NC_008698.1. DR STRING; 368408.Tpen_1812; -. DR EnsemblBacteria; ABL79207; ABL79207; Tpen_1812. DR GeneID; 4602049; -. DR KEGG; tpe:Tpen_1812; -. DR eggNOG; arCOG00770; Archaea. DR eggNOG; COG1199; LUCA. DR HOGENOM; HOG000223366; -. DR KO; K10844; -. DR OMA; FAVCGGK; -. DR BioCyc; TPEN368408:GHSG-1868-MONOMER; -. DR Proteomes; UP000000641; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 4. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 7. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW Complete proteome {ECO:0000313|Proteomes:UP000000641}; KW Reference proteome {ECO:0000313|Proteomes:UP000000641}. FT DOMAIN 2 253 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 617 AA; 69819 MW; 9F6AC089C2DC94FB CRC64; MVTGRYAFPY KPRRHQLEVA EKIVELLKRG NVVLEAPTGF GKTPVVIYAL LPFMERGGRV VWAVRTGSET DRPVEEFRVF REKSGARFVA VGLRGKKDMC LLAGERGGQL DYSEVSYICS RERRRCKYYR RLQEGVDYSE LLERGALTYR DVFEWARREG VCPYFLQREL LKVADLVALS YNYVVDEDLS WTLRGAFPTS QSILVVDEAH NLQELNLGGD TVTEGTIARA KEEAAEMGDE EVYGFVEALE AKVREKYGSL PEEGSEVFRA EDLLDGFDED IIEKTLRLGE LVREKRYRSG ARPRSSAHHL AEFLRKAVDL EGVKGIALIA EKVDGRVHLN IWDMRSGEIL SGVWRRFRRV IFMSGTLSPI EAFAETVGLS DYTPVTVPSP YDETNASVYL VKDLTTRGEE LSEEMAERYV SAVGRVLGRV KRNSAVFTAS YRVLQRLLEA GLKEEAERLG YEVVVERRDM SGQEAGAALE KFKNLAAEGR GLLLAPMGGR FAEGADFPGE ELMCVFLAGI PFEKPTTKTN LYIKYYEELY GPEKGRLYAY VYPALRRASQ AIGRALRSPR DQAVIVLGDS RYRNYMGLLP DYVRELAVEV KSQDLDSVEP PWEKIKL // ID A2QRS5_ASPNC Unreviewed; 801 AA. AC A2QRS5; DT 06-MAR-2007, integrated into UniProtKB/TrEMBL. DT 06-MAR-2007, sequence version 1. DT 11-MAY-2016, entry version 60. DE SubName: Full=Aspergillus niger contig An08c0160, genomic contig {ECO:0000313|EMBL:CAK39953.1}; DE EC=3.6.1.- {ECO:0000313|EMBL:CAK39953.1}; GN ORFNames=An08g07060 {ECO:0000313|EMBL:CAK39953.1}; OS Aspergillus niger (strain CBS 513.88 / FGSC A1513). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; OC Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus. OX NCBI_TaxID=425011 {ECO:0000313|Proteomes:UP000006706}; RN [1] {ECO:0000313|EMBL:CAK39953.1, ECO:0000313|Proteomes:UP000006706} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=CBS 513.88 / FGSC A1513 {ECO:0000313|Proteomes:UP000006706}; RX PubMed=17259976; DOI=10.1038/nbt1282; RA Pel H.J., de Winde J.H., Archer D.B., Dyer P.S., Hofmann G., RA Schaap P.J., Turner G., de Vries R.P., Albang R., Albermann K., RA Andersen M.R., Bendtsen J.D., Benen J.A., van den Berg M., RA Breestraat S., Caddick M.X., Contreras R., Cornell M., Coutinho P.M., RA Danchin E.G., Debets A.J., Dekker P., van Dijck P.W., van Dijk A., RA Dijkhuizen L., Driessen A.J., d'Enfert C., Geysens S., Goosen C., RA Groot G.S., de Groot P.W., Guillemette T., Henrissat B., Herweijer M., RA van den Hombergh J.P., van den Hondel C.A., van der Heijden R.T., RA van der Kaaij R.M., Klis F.M., Kools H.J., Kubicek C.P., RA van Kuyk P.A., Lauber J., Lu X., van der Maarel M.J., Meulenberg R., RA Menke H., Mortimer M.A., Nielsen J., Oliver S.G., Olsthoorn M., RA Pal K., van Peij N.N., Ram A.F., Rinas U., Roubos J.A., Sagt C.M., RA Schmoll M., Sun J., Ussery D., Varga J., Vervecken W., RA van de Vondervoort P.J., Wedler H., Wosten H.A., Zeng A.P., RA van Ooyen A.J., Visser J., Stam H.; RT "Genome sequencing and analysis of the versatile cell factory RT Aspergillus niger CBS 513.88."; RL Nat. Biotechnol. 25:221-231(2007). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AM270171; CAK39953.1; -; Genomic_DNA. DR RefSeq; XP_001392821.1; XM_001392784.1. DR ProteinModelPortal; A2QRS5; -. DR EnsemblFungi; CADANGAT00007028; CADANGAP00006899; CADANGAG00007028. DR GeneID; 4983023; -. DR KEGG; ang:ANI_1_992074; -. DR EuPathDB; FungiDB:An08g07060; -. DR HOGENOM; HOG000205390; -. DR KO; K10844; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000006706; Chromosome 8R. DR GO; GO:0000439; C:core TFIIH complex; IEA:EnsemblFungi. DR GO; GO:0005829; C:cytosol; IEA:EnsemblFungi. DR GO; GO:0005675; C:holo TFIIH complex; IEA:EnsemblFungi. DR GO; GO:0000112; C:nucleotide-excision repair factor 3 complex; IEA:EnsemblFungi. DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:EnsemblFungi. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0043141; F:ATP-dependent 5'-3' DNA helicase activity; IEA:EnsemblFungi. DR GO; GO:0003684; F:damaged DNA binding; IEA:EnsemblFungi. DR GO; GO:0000717; P:nucleotide-excision repair, DNA duplex unwinding; IEA:EnsemblFungi. DR GO; GO:0033683; P:nucleotide-excision repair, DNA incision; IEA:EnsemblFungi. DR GO; GO:0070816; P:phosphorylation of RNA polymerase II C-terminal domain; IEA:EnsemblFungi. DR GO; GO:0045951; P:positive regulation of mitotic recombination; IEA:EnsemblFungi. DR GO; GO:0010525; P:regulation of transposition, RNA-mediated; IEA:EnsemblFungi. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:EnsemblFungi. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000006706}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000006706}. FT DOMAIN 7 283 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 248 275 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 801 AA; 91265 MW; 413D857C73423D15 CRC64; MKFFIDDLPV LFPYPRIYPE QYAYMCDLKK TLDAGGHCVL EMPSGTGKTV SLLSLIVAYQ QHYPEHRKLI YCSRTMSEIE KALAELKALM KFRAKELGYT EDFRALGLTS RKNLCLHPSV KREKSGAVVD ARCRSLTAGF VKEKKERGED VELCVYHENL DLLEPHNLVP PGVFTLDGLL KYGEEHKQCP YFSARRMMPF CNVIIYSYHY LLDPKIAERV SRELSKDCIV VFDEAHNIDN VCIESLSIDL TEDSLRKATR GANNLERKIN EMKTSDAEKL QNEYSKLVEG LQAAEQAREE DQFISNPVLP DDLLKEAVPG NIRRAEHFVS FLKRFIEYLK TRMKVMHTIS ETPPSFLTHV KDLTYIERKP LRFCAERLTS LVRTLELINI EDYQPLQEVA TFATLVATYE KGFLLILEPF ESEAATVPNP VLHFTCLDAA IAIKPVFERF SSVIITSGTL SPLEMYPKML GFNAVMQESY SMTLARRSFL PMIVTRGSDQ AQISSSFQIR NDPGVVRNYG NLVLEFSRIT PDGVVVFFPS YLYMESIISM WQGMGILDSI WNYKLILVET PDAQESSLAL ETYRTACCNG RGALLLCVAR GKVSEGIDFD HHYGRAVINI GVPFQYTESR ILKARLEFLR ENYRIRENDF LSFDAMRHAA QCLGRVLRGK DDYGVMVLAD RRFQKKRNQL PKWINQAMLE SETNLSTDMA AATAKNFLRT MAQPFKARDQ EGISTWSLAD IERHREKQKL EEERALREVP PNLAYGAAAA APHNGVRNGA GGADEFEDEI DNEDLMMLDA Q // ID A2SSG7_METLZ Unreviewed; 676 AA. AC A2SSG7; DT 06-MAR-2007, integrated into UniProtKB/TrEMBL. DT 06-MAR-2007, sequence version 1. DT 11-MAY-2016, entry version 62. DE SubName: Full=DEAD_2 domain protein {ECO:0000313|EMBL:ABN07273.1}; GN OrderedLocusNames=Mlab_1104 {ECO:0000313|EMBL:ABN07273.1}; OS Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z). OC Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; OC Methanocorpusculaceae; Methanocorpusculum. OX NCBI_TaxID=410358 {ECO:0000313|EMBL:ABN07273.1, ECO:0000313|Proteomes:UP000000365}; RN [1] {ECO:0000313|EMBL:ABN07273.1, ECO:0000313|Proteomes:UP000000365} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 43576 / DSM 4855 / Z {ECO:0000313|Proteomes:UP000000365}; RX PubMed=21304657; DOI=10.4056.sigs.35575; RA Anderson I.J., Sieprawska-Lupa M., Goltsman E., Lapidus A., RA Copeland A., Glavina Del Rio T., Tice H., Dalin E., Barry K., RA Pitluck S., Hauser L., Land M., Lucas S., Richardson P., Whitman W.B., RA Kyrpides N.C.; RT "Complete genome sequence of Methanocorpusculum labreanum type strain RT Z."; RL Stand. Genomic Sci. 1:197-203(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000559; ABN07273.1; -; Genomic_DNA. DR RefSeq; WP_011833476.1; NC_008942.1. DR ProteinModelPortal; A2SSG7; -. DR STRING; 410358.Mlab_1104; -. DR EnsemblBacteria; ABN07273; ABN07273; Mlab_1104. DR GeneID; 4795538; -. DR KEGG; mla:Mlab_1104; -. DR eggNOG; arCOG00770; Archaea. DR eggNOG; COG1199; LUCA. DR HOGENOM; HOG000237163; -. DR KO; K10844; -. DR OMA; FAVCGGK; -. DR BioCyc; MLAB410358:GH7C-1140-MONOMER; -. DR Proteomes; UP000000365; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 2. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW Complete proteome {ECO:0000313|Proteomes:UP000000365}; KW Reference proteome {ECO:0000313|Proteomes:UP000000365}. FT DOMAIN 3 308 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 676 AA; 76617 MW; A584CEF4CCCC520E CRC64; MADTADFFPY QTYRKNQKEM LEEVEKTAEE NGILLIDAPT GSGKSSVIAS LLAKANGRKI LVAVRTISQL QIFIRELDLI RQKKQPTLKF VYLIGKGNMC PLGGYGDVYR RCEGVKAFTS ALMQQRADRG SFDPATDKQI LEQIRKQDRE HPLICPYFVN SRVFVQSEEG GRRMIPSPEL RRKSDIAQKQ IVRPNELLNF AGKVCPYDLM LSAAKGADVI ICNYYHLFND DIREQLYVNL QCEEHNVMLL LDEAHNLGDV IQTIQSIRIR DTDIEAAANE VASLRDKVRG SEAVRHILPR IAEFIDGLQR SNEAEDWFDP QIFNRFIIKG SLYGKPEAML EDIISIKEAM RERGIERGDY RESAIEKLCE FLIRLYRSST DPSFLTVYTK DAETITLEVR NIDPADRLQE LVSKHAATIL ISGTLSPVDS YRKYYFGSMP VKTLSLANSF PKENRLVLGT RDITTAFSKR QNAENTQAIV EYILAFAKLP GNIAVYFPSY QLQNRFAEAC VSKIRNKQVF IEPRESDEAN EALKEFISLP GKHKSGILFA VCGGKWSEGL DYRGDQLTAA LVIGLPLAPF TPVRRMVNSY YRRKFGAEGE FIAYTLPAIN KSMQALGRVL RTENDRGVLI LGDQRFLEGE IFGGLSPWMQ DELMECDVDT VKSKLEKWGR DASGRL // ID A2Y0B7_ORYSI Unreviewed; 734 AA. AC A2Y0B7; DT 20-MAR-2007, integrated into UniProtKB/TrEMBL. DT 20-MAR-2007, sequence version 1. DT 11-MAY-2016, entry version 57. DE SubName: Full=Putative uncharacterized protein {ECO:0000313|EMBL:EAY96527.1}; GN ORFNames=OsI_18432 {ECO:0000313|EMBL:EAY96527.1}; OS Oryza sativa subsp. indica (Rice). OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza. OX NCBI_TaxID=39946 {ECO:0000313|EMBL:EAY96527.1, ECO:0000313|Proteomes:UP000007015}; RN [1] {ECO:0000313|EMBL:EAY96527.1, ECO:0000313|Proteomes:UP000007015} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=cv. 93-11 {ECO:0000313|Proteomes:UP000007015}; RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038; RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., RA Cong L., Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., RA Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., RA Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., RA Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., RA Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., RA Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., RA Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., RA Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., RA Chen C., Chen H., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., RA Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., RA Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., RA Zheng W., Hao B., Liu S., Wang W., Yuan L., Cao M., McDermott J., RA Samudrala R., Wang J., Wong G.K., Yang H.; RT "The genomes of Oryza sativa: a history of duplications."; RL PLoS Biol. 3:266-281(2005). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CM000130; EAY96527.1; -; Genomic_DNA. DR ProteinModelPortal; A2Y0B7; -. DR STRING; 39946.BGIOSGA018821-PA; -. DR EnsemblPlants; BGIOSGA018821-TA; BGIOSGA018821-PA; BGIOSGA018821. DR Gramene; BGIOSGA018821-TA; BGIOSGA018821-PA; BGIOSGA018821. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR OMA; DEVWKYK; -. DR Proteomes; UP000007015; Chromosome 5. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0000724; P:double-strand break repair via homologous recombination; IEA:EnsemblPlants. DR GO; GO:0010286; P:heat acclimation; IEA:EnsemblPlants. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR GO; GO:0045893; P:positive regulation of transcription, DNA-templated; IEA:EnsemblPlants. DR GO; GO:0043687; P:post-translational protein modification; IEA:EnsemblPlants. DR GO; GO:0006457; P:protein folding; IEA:EnsemblPlants. DR GO; GO:0009644; P:response to high light intensity; IEA:EnsemblPlants. DR GO; GO:0042542; P:response to hydrogen peroxide; IEA:EnsemblPlants. DR GO; GO:0010212; P:response to ionizing radiation; IEA:EnsemblPlants. DR GO; GO:0009411; P:response to UV; IEA:EnsemblPlants. DR GO; GO:0000394; P:RNA splicing, via endonucleolytic cleavage and ligation; IEA:EnsemblPlants. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:EnsemblPlants. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000007015}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000007015}. FT DOMAIN 1 264 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 734 AA; 82685 MW; 4F8C4E60319DFACA CRC64; MGELKRALDA RGHALLEMPT GTGKTAALIS LITSYSLASP SRPLRLIYCT RTVHEMEKTL AELRLLFAHL PAAASRSLLA LGLSSRKNLC VHPQASAAAA RDSVDTACRR LTASWVRDRA ASDPDSTPLC DFFESFDRAA AAGDLASYMP PGVYTLADLR ALGRDRGICP YFLARQMVKY ANVVVYSYQY LIDPKVASIV SREMQKECVV VFDEAHNIDN VCIEALSVSI RKQTLEGAER NLRRISQEID RFKATDANRL RAEYNRLVDG LAQRGNLPIS DAWLANPALP EDILKEAVPG NIRRAEHFLA VLRRLVRFLD GRLETENVEN EMPVAFVASI HSQAGIDQKM LRFCYDRLHS LMLTLEITDT DEFMHIQTIC DFATLIGTYT RGFSIIIEPY DERMPDIRDP VIQLSCHDAS LAIQPVFERF QTVVITSGTL SPIDLYPRLL NFNPVISRSF TMSLTRDCIC PMVLTRGSDQ LPVSTKFDMR SDPGVVRNYG RLLLEMASAV PDGIVCFFVS YSYMDGIVNS WNEMGILQDI MQHKLVFIET PDVVETTLAL DNYRKACDCG RGAIFFSVAR GKVAEGIDFD RHYGRLVIMF GVPFQYTLSR ILLARLEYLR ETFQIKEGDF LTFDALRQAA QCVGRVIRSK ADYGMMIFAD KRYSRHDKRS KLPGWILSHL HDAHLNLSTD MALHIAREFL RRMAQPYDKT GSGGNKTLLT EEDLQNMAQD AMEM // ID A3CTM2_METMJ Unreviewed; 669 AA. AC A3CTM2; DT 20-MAR-2007, integrated into UniProtKB/TrEMBL. DT 20-MAR-2007, sequence version 1. DT 11-MAY-2016, entry version 58. DE SubName: Full=Helicase c2 {ECO:0000313|EMBL:ABN56722.1}; GN OrderedLocusNames=Memar_0789 {ECO:0000313|EMBL:ABN56722.1}; OS Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1). OC Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; OC Methanomicrobiaceae; Methanoculleus. OX NCBI_TaxID=368407 {ECO:0000313|EMBL:ABN56722.1, ECO:0000313|Proteomes:UP000002146}; RN [1] {ECO:0000313|EMBL:ABN56722.1, ECO:0000313|Proteomes:UP000002146} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 35101 / DSM 1498 / JR1 RC {ECO:0000313|Proteomes:UP000002146}; RX PubMed=21304656; DOI=10.4056/sigs.32535; RA Anderson I.J., Sieprawska-Lupa M., Lapidus A., Nolan M., Copeland A., RA Glavina Del Rio T., Tice H., Dalin E., Barry K., Saunders E., Han C., RA Brettin T., Detter J.C., Bruce D., Mikhailova N., Pitluck S., RA Hauser L., Land M., Lucas S., Richardson P., Whitman W.B., RA Kyrpides N.C.; RT "Complete genome sequence of Methanoculleus marisnigri Romesser et al. RT 1981 type strain JR1."; RL Stand. Genomic Sci. 1:189-196(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000562; ABN56722.1; -; Genomic_DNA. DR RefSeq; WP_011843633.1; NC_009051.1. DR ProteinModelPortal; A3CTM2; -. DR STRING; 368407.Memar_0789; -. DR EnsemblBacteria; ABN56722; ABN56722; Memar_0789. DR GeneID; 4846818; -. DR KEGG; mem:Memar_0789; -. DR eggNOG; arCOG00770; Archaea. DR eggNOG; COG1199; LUCA. DR HOGENOM; HOG000237163; -. DR KO; K10844; -. DR OMA; FAVCGGK; -. DR BioCyc; MMAR368407:GH7L-804-MONOMER; -. DR Proteomes; UP000002146; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR014001; Helicase_ATP-bd. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00487; DEXDc; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000313|EMBL:ABN56722.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000002146}; KW Helicase {ECO:0000313|EMBL:ABN56722.1}; KW Hydrolase {ECO:0000313|EMBL:ABN56722.1}; KW Nucleotide-binding {ECO:0000313|EMBL:ABN56722.1}; KW Reference proteome {ECO:0000313|Proteomes:UP000002146}. FT DOMAIN 2 300 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 669 AA; 75809 MW; 55A6B35788370E58 CRC64; MDSLDDWFPY REYRPHQREM LEAAASIARD GGIAMIDAPT GSGKSSVVSA LLAESRGRKV LVAVRTISQL ATFMRELELI RKKRGNLKFA YLIGKSSMCP LGGEGDIYRR CEGVKSFSTA LMRERAQKGS LVPANDRQIK QQIRKMDPEH PLICPYFIHG KSFVEPEDGG LKMIPSAALR VRAERVSTEL IWPDQLAGFC GDICPYDTMM HAARDADVVL VNFYHLFDDM IREQLYQSLG IEGHDALLLI DEAHNCGDVV QSIESVTIEE RDIVQAGHEL SGRRRSPQAD AIVQILPQIT RFMEALKGSY ETEDFFEPPV FQKMILSGTL YRSVEEIVDD LLKISEGIRE KNMQAGEFRE SAIERLTEFF YRIFRSAADP AYLTVYRKEE DGAVALEVRN IDPSTKLQDI ARAHACCVLI SGTLSPIESY RRYYFGDLPV TAMSLPNSFP PQNRRIFCAN DITTAYSMRR DRENLARTED YITTFARLPG NLAVYFPSYD LLNTFAERCA PRIRKKQIYI ESKDATASAA MLREFMALPG TGRSGILFAV CGGKWSEGLD YRGEMLSGAL VIGLPLAPFN RVRRMVIDYF RMKFGEEGEF ISYTLPAVNR ALQALGRVLR TPDDRGMLIL GDRRFLERRV HAGLPPWMQE EMTACTVEAF RKEAERWRS // ID A3M0P3_PICST Unreviewed; 793 AA. AC A3M0P3; DT 03-APR-2007, integrated into UniProtKB/TrEMBL. DT 03-APR-2007, sequence version 1. DT 11-MAY-2016, entry version 65. DE SubName: Full=DNA helicase component of transcription factor b {ECO:0000313|EMBL:ABN68567.1}; DE EC=3.6.1.- {ECO:0000313|EMBL:ABN68567.1}; GN Name=RAD3 {ECO:0000313|EMBL:ABN68567.1}; GN ORFNames=PICST_50344 {ECO:0000313|EMBL:ABN68567.1}; OS Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / OS NRRL Y-11545) (Yeast) (Pichia stipitis). OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; OC Saccharomycetes; Saccharomycetales; Debaryomycetaceae; OC Scheffersomyces. OX NCBI_TaxID=322104 {ECO:0000313|EMBL:ABN68567.1, ECO:0000313|Proteomes:UP000002258}; RN [1] {ECO:0000313|EMBL:ABN68567.1, ECO:0000313|Proteomes:UP000002258} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545 RC {ECO:0000313|Proteomes:UP000002258}; RX PubMed=17334359; DOI=10.1038/nbt1290; RA Jeffries T.W., Grigoriev I.V., Grimwood J., Laplaza J.M., Aerts A., RA Salamov A., Schmutz J., Lindquist E., Dehal P., Shapiro H., Jin Y.S., RA Passoth V., Richardson P.M.; RT "Genome sequence of the lignocellulose-bioconverting and xylose- RT fermenting yeast Pichia stipitis."; RL Nat. Biotechnol. 25:319-326(2007). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000502; ABN68567.1; -; Genomic_DNA. DR RefSeq; XP_001386596.1; XM_001386559.1. DR STRING; 322104.XP_001386596.1; -. DR EnsemblFungi; ABN68567; ABN68567; PICST_50344. DR GeneID; 4841113; -. DR KEGG; pic:PICST_50344; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR HOGENOM; HOG000205390; -. DR InParanoid; A3M0P3; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000002258; Chromosome 8. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:ABN68567.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000002258}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:ABN68567.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:ABN68567.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:ABN68567.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000002258}. FT DOMAIN 7 295 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 793 AA; 90886 MW; E01A72C9A7B23705 CRC64; MKFFIDDLPV LFPYPRIYPE QYAYMCDIKK TLDVGGNCIL EMPSGTGKTV SLLSLTVAYQ MHYPEHRKIV YCSRTMSEIE KALIELHKLM EFRSTELGYV EEFRGLGLTS RKNLCVHPTI SQERKGNVVD EKCRRITNGQ LKERIAKGLV TPDQEVNHAE ANTLCDMHEN MNDMDQHNLI PAGVYSFDAL IKYCKQEGTC PYFTVRRMIP FCNIIIYSYH YLLDPKIAER VSKELSKDSI IIFDEAHNID NVCIESLSLD LTDDTLKRAT RGANKLGDAV DEMKAHDSEK LQNEYEKLVE GLRQAEIARD EELFMSNPTL PQDLLDEAIP GNIRKAEHFI SFLKRFIEYL KTRMKVLHVI SETPISFLQH LKELTFIDRK PLRFCSERLS LLVRTLELSE IEDFHALKDI ATFATLVSTY DTGFQLILEP FESEGSTVPN PILHFICLDA SIAIKPVFER FSSVIITSGT ISPLDMYPKM MNFQTVIQES YTMTLARRSF LPMIVTKGSD QVSISSRFEI RNDPSVVRNY GSLLIEFSKI TPDGMVVFFP SYLYMESIIS MWQTMGVLDE VWKYKLILVE TPDAQETSLA LETYRKACSN GRGAVLLSVA RGKVSEGIDF DHHYGRTVLM IGIPFQYTES RILKARLEFM RDHFQIREND FLSFDAMRHA AQCLGRVLRG KDDYGIMVLA DRRFSKKKNQ LPKWIAQALN DSDTNLSTDM ALATARKFLR SLAQPANPKD QEGVSVWNIE QLQQFQQQQQ MRMEALGVAK EKGNGDAAEE DFMDIDDDDL DLL // ID A4HDT9_LEIBR Unreviewed; 813 AA. AC A4HDT9; DT 01-MAY-2007, integrated into UniProtKB/TrEMBL. DT 01-MAY-2007, sequence version 1. DT 11-MAY-2016, entry version 60. DE SubName: Full=Putative TFIIH basal transcription factor complex helicase subunit {ECO:0000313|EMBL:CAM42411.1}; DE EC=3.6.1.- {ECO:0000313|EMBL:CAM42411.1}; GN ORFNames=LBRM_24_2360 {ECO:0000313|EMBL:CAM42411.1}; OS Leishmania braziliensis. OC Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; OC Leishmaniinae; Leishmania; Leishmania braziliensis species complex. OX NCBI_TaxID=5660 {ECO:0000313|Proteomes:UP000007258}; RN [1] {ECO:0000313|EMBL:CAM42411.1, ECO:0000313|Proteomes:UP000007258} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=MHOM/BR/75/M2904 {ECO:0000313|EMBL:CAM42411.1, RC ECO:0000313|Proteomes:UP000007258}; RX PubMed=17572675; DOI=10.1038/ng2053; RA Peacock C.S., Seeger K., Harris D., Murphy L., Ruiz J.C., Quail M.A., RA Peters N., Adlem E., Tivey A., Aslett M., Kerhornou A., Ivens A., RA Fraser A., Rajandream M.-A., Carver T., Norbertczak H., RA Chillingworth T., Hance Z., Jagels K., Moule S., Ormond D., Rutter S., RA Sqaures R., Whitehead S., Rabbinowitsch E., Arrowsmith C., White B., RA Thurston S., Bringaud F., Baldauf S.L., Faulconbridge A., Jeffares D., RA Depledge D.P., Oyola S.O., Hilley J.D., Brito L.O., Tosi L.R.O., RA Barrell B., Cruz A.K., Mottram J.C., Smith D.F., Berriman M.; RT "Comparative genomic analysis of three Leishmania species that cause RT diverse human disease."; RL Nat. Genet. 39:839-847(2007). RN [2] {ECO:0000313|EMBL:CAM42411.1, ECO:0000313|Proteomes:UP000007258} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=MHOM/BR/75/M2904 {ECO:0000313|EMBL:CAM42411.1, RC ECO:0000313|Proteomes:UP000007258}; RX PubMed=22038252; DOI=10.1101/gr.122945.111; RA Rogers M.B., Hilley J.D., Dickens N.J., Wilkes J., Bates P.A., RA Depledge D.P., Harris D., Her Y., Herzyk P., Imamura H., Otto T.D., RA Sanders M., Seeger K., Dujardin J.C., Berriman M., Smith D.F., RA Hertz-Fowler C., Mottram J.C.; RT "Chromosome and gene copy number variation allow major structural RT change between species and strains of Leishmania."; RL Genome Res. 21:2129-2142(2011). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FR798999; CAM42411.1; -; Genomic_DNA. DR RefSeq; XP_001565499.1; XM_001565449.1. DR ProteinModelPortal; A4HDT9; -. DR STRING; 420245.XP_001565499.1; -. DR EnsemblProtists; CAM42411; CAM42411; LBRM_24_2360. DR GeneID; 5416080; -. DR KEGG; lbz:LBRM_24_2360; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; A4HDT9; -. DR KO; K10844; -. DR OMA; KICPYFL; -. DR Proteomes; UP000007258; Chromosome 24. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CAM42411.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000007258}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:CAM42411.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CAM42411.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CAM42411.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000007258}. FT DOMAIN 7 275 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 246 288 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 813 AA; 91638 MW; B245AC8CC4C77D58 CRC64; MKLYVEDVLV VFPYEYIYPE QLDYITELKR GLDKGGHMVL EMPSGTGKTI SLLSILVAYL HHHAHEKRKV VYCTRTVEEM VKTMGEMRKL LKHWEAEGEQ LRPLRGLCLT AKKNLCIEPS VTSLIHPDKV DAGCRSITAP WQQEGRCGYY DTLIQGPLEL PPGVYSLDDL KDFGEQHHVC PYYLVRKALP IVDIIVHSYL YMVDPVVSEV TKAFLNENTI VVMDEGHNVD DVCIEAMSLI LTKKDSLDAK QNMKDLNKEL DHLKATNRQQ LQDEYDRLVN GLAMAEMARI PEERAVVVVP AIPANVAEGA IPASLRQANH FLVFMQRLVD FTHRIVARIT RTYVADPLTF LTKLKEECAL EISHFRYLSE RLKVLLTTLQ VTNTGKYRPV ALIAQMYTLL SMYYTDDRYE KPGFVVVCEA FDPTRPQIPD PVIRTVCVDA SLALRDTFGR YRSVILTSGT LSPMDIYPKI LGFAPAVSKS FQMTLSRKCI APVIVTRSSE SVSITAEEVT SSFKVRTNPA AQALVTSAYE SLLFELAKTV PDGMVCFFTG YQYMGEVLLA WHSSGFLQKL AKHKLIFVET QGVEETSVAL ANYRRACDIG RGAIFMSIAR GKIAEGIDFD RHYGRAVIMF GVPFLPPNDE PLRQRMHWME VCLGISESEF RNFDAMRQAS QCIGRVLRNK TDYGMMLLVD KRFALNDKCN KIPRWIVQCL KNNTNLSVDA AVAVARGFFK EMAQPWEHEK DLGTTLLSKE TLRKMGKLSS SAPKYASVPE SLAAENVGIV TTPKAEEEEE GVIAAVREPG SGSRKRKRDG ERE // ID A4I136_LEIIN Unreviewed; 813 AA. AC A4I136; DT 01-MAY-2007, integrated into UniProtKB/TrEMBL. DT 01-MAY-2007, sequence version 1. DT 11-MAY-2016, entry version 61. DE SubName: Full=TFIIH basal transcription factor complex helicase subunit {ECO:0000313|EMBL:CAM68462.1}; DE EC=3.6.1.- {ECO:0000313|EMBL:CAM68462.1}; GN ORFNames=LINJ_24_2370 {ECO:0000313|EMBL:CAM68462.1}; OS Leishmania infantum. OC Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; OC Leishmaniinae; Leishmania. OX NCBI_TaxID=5671 {ECO:0000313|Proteomes:UP000008153}; RN [1] {ECO:0000313|EMBL:CAM68462.1, ECO:0000313|Proteomes:UP000008153} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=JPCM5 {ECO:0000313|EMBL:CAM68462.1, RC ECO:0000313|Proteomes:UP000008153}; RX PubMed=17572675; DOI=10.1038/ng2053; RA Peacock C.S., Seeger K., Harris D., Murphy L., Ruiz J.C., Quail M.A., RA Peters N., Adlem E., Tivey A., Aslett M., Kerhornou A., Ivens A., RA Fraser A., Rajandream M.-A., Carver T., Norbertczak H., RA Chillingworth T., Hance Z., Jagels K., Moule S., Ormond D., Rutter S., RA Sqaures R., Whitehead S., Rabbinowitsch E., Arrowsmith C., White B., RA Thurston S., Bringaud F., Baldauf S.L., Faulconbridge A., Jeffares D., RA Depledge D.P., Oyola S.O., Hilley J.D., Brito L.O., Tosi L.R.O., RA Barrell B., Cruz A.K., Mottram J.C., Smith D.F., Berriman M.; RT "Comparative genomic analysis of three Leishmania species that cause RT diverse human disease."; RL Nat. Genet. 39:839-847(2007). RN [2] {ECO:0000313|EMBL:CAM68462.1, ECO:0000313|Proteomes:UP000008153} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=JPCM5 {ECO:0000313|EMBL:CAM68462.1, RC ECO:0000313|Proteomes:UP000008153}; RX PubMed=22038252; DOI=10.1101/gr.122945.111; RA Rogers M.B., Hilley J.D., Dickens N.J., Wilkes J., Bates P.A., RA Depledge D.P., Harris D., Her Y., Herzyk P., Imamura H., Otto T.D., RA Sanders M., Seeger K., Dujardin J.C., Berriman M., Smith D.F., RA Hertz-Fowler C., Mottram J.C.; RT "Chromosome and gene copy number variation allow major structural RT change between species and strains of Leishmania."; RL Genome Res. 21:2129-2142(2011). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FR796456; CAM68462.1; -; Genomic_DNA. DR RefSeq; XP_001466027.1; XM_001465990.1. DR ProteinModelPortal; A4I136; -. DR STRING; 435258.XP_001466027.1; -. DR EnsemblProtists; CAM68462; CAM68462; LINJ_24_2370. DR GeneID; 5069458; -. DR KEGG; lif:LINJ_24_2370; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; A4I136; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR Proteomes; UP000008153; Chromosome 24. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CAM68462.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000008153}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:CAM68462.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CAM68462.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CAM68462.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000008153}. FT DOMAIN 7 275 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 246 273 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 813 AA; 91717 MW; 153875872D7DD1FF CRC64; MKLYVEDVLV VFPYEYIYPE QLDYITELKR GLDKGGHMVL EMPSGTGKTI SLLSILVAYL HHHAHEKRKV VYCTRTVEEM VKTMGEMRKL LKHWEAEGEQ LRPLRGLCLT AKKNLCIETS VASLIHPDEV DAGCRSITAP WQQEGRCGYF DTLAQAPLEL PPGVYSLDDL KDFGEQHHVC PYYLVRKALP VVDIIVHSYL YMVDPVVSEV TKEFLNENTI VVMDEGHNVD DVCIEAMSLI LTKKDSLDAK QNMKDLSKEL DHLKATNRQM LQDEYDRLVN GLAMTEMARD PEQRALVEAP AIPANVAEGA IPASLRQANH FLAFMQRLVD FTHRIVARIT RTYVADPLTF LTKLKEECAL EISHFRYLSE RLKVLLTTLQ VTNAGKYRPV ALIAQMYTLL SMYYTDDRYE KPGFVVVCEA FDPTRPQIPD PVIRTVCVDA SLALRDTFAR YRSVILTSGT LSPMDIYPKI LGFTPAISKS FQMTLSRKCI APVIVTRSSE SVSITAEEVT SSFKVRTNPT AQALVTSAYE SLLLELAKTV PDGMVCFFTG YQYMGEVLLA WHSSGFLQKL AKHKLIFVET QGVEETSVAL ANYRRACDIG RGAIFMSIAR GKIAEGIDFD RHYGRAVVMF GVPFLPPNDE PLRQRMHWME VCLGISESEF RNFDAMRQAS QCIGRVLRNK TDYGMMLLVD KRFALNDKVK KIPRWIVQCL KNNTNLSVDA AVAVARGFFK EMAQPWEHEK DLGTTLLSKE TLRRMGRLSS SAAKYASFSE TLAAENVSTV TAPTTEFEEI VGITAVREPG AGSRKRKRDG ERE // ID A4S605_OSTLU Unreviewed; 788 AA. AC A4S605; DT 15-MAY-2007, integrated into UniProtKB/TrEMBL. DT 15-MAY-2007, sequence version 1. DT 11-MAY-2016, entry version 63. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ABO99153.1}; GN ORFNames=OSTLU_26944 {ECO:0000313|EMBL:ABO99153.1}; OS Ostreococcus lucimarinus (strain CCE9901). OC Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; OC Mamiellales; Bathycoccaceae; Ostreococcus. OX NCBI_TaxID=436017 {ECO:0000313|EMBL:ABO99153.1, ECO:0000313|Proteomes:UP000001568}; RN [1] {ECO:0000313|EMBL:ABO99153.1, ECO:0000313|Proteomes:UP000001568} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=CCE9901 {ECO:0000313|EMBL:ABO99153.1, RC ECO:0000313|Proteomes:UP000001568}; RX PubMed=17460045; DOI=10.1073/pnas.0611046104; RA Palenik B., Grimwood J., Aerts A., Rouze P., Salamov A., Putnam N., RA Dupont C., Jorgensen R., Derelle E., Rombauts S., Zhou K., Otillar R., RA Merchant S.S., Podell S., Gaasterland T., Napoli C., Gendler K., RA Manuell A., Tai V., Vallon O., Piganeau G., Jancek S., Heijde M., RA Jabbari K., Bowler C., Lohr M., Robbens S., Werner G., Dubchak I., RA Pazour G.J., Ren Q., Paulsen I., Delwiche C., Schmutz J., Rokhsar D., RA Van de Peer Y., Moreau H., Grigoriev I.V.; RT "The tiny eukaryote Ostreococcus provides genomic insights into the RT paradox of plankton speciation."; RL Proc. Natl. Acad. Sci. U.S.A. 104:7705-7710(2007). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000592; ABO99153.1; -; Genomic_DNA. DR RefSeq; XP_001420860.1; XM_001420823.1. DR ProteinModelPortal; A4S605; -. DR STRING; 436017.A4S605; -. DR EnsemblPlants; ABO99153; ABO99153; OSTLU_26944. DR GeneID; 5004722; -. DR Gramene; ABO99153; ABO99153; OSTLU_26944. DR KEGG; olu:OSTLU_26944; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR Proteomes; UP000001568; Chromosome 12. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0000724; P:double-strand break repair via homologous recombination; IEA:EnsemblPlants. DR GO; GO:0010286; P:heat acclimation; IEA:EnsemblPlants. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR GO; GO:0045893; P:positive regulation of transcription, DNA-templated; IEA:EnsemblPlants. DR GO; GO:0043687; P:post-translational protein modification; IEA:EnsemblPlants. DR GO; GO:0006457; P:protein folding; IEA:EnsemblPlants. DR GO; GO:0009644; P:response to high light intensity; IEA:EnsemblPlants. DR GO; GO:0042542; P:response to hydrogen peroxide; IEA:EnsemblPlants. DR GO; GO:0010212; P:response to ionizing radiation; IEA:EnsemblPlants. DR GO; GO:0009411; P:response to UV; IEA:EnsemblPlants. DR GO; GO:0000394; P:RNA splicing, via endonucleolytic cleavage and ligation; IEA:EnsemblPlants. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:EnsemblPlants. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000001568}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000001568}. FT DOMAIN 7 299 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 788 AA; 88882 MW; 69B886D712C022D6 CRC64; MDFNLEGLRV FFPYPQIYPE QLAMMTEFKR SLDARGHGAI EMPTGTGKTI TVLSLCVSYQ IAHPECGKLI YCTRTVPEME KVLAECRTLE RFIAARAGED VAAMLALGLS SRKNMCVNPR VVDEGSRESV DGKCRRLTAS WVREKRLERE ARGASENENV EDGGEGNCCE FFEDFESAGE KAVLPPGVYT LHDLRAFGRT KKWCPYFLAR NMISFANVVV YNYQYMLDPK VASLVSSSLE KECIVVFDEA HNIDNVCIEA LSVNLRQQTL ENAGRSITSL NTRIDRAKQT DERRLRQEYE RLVNGLAQQG VLARGGGEDV LMNPIIPDDI LREAVPGNIR RAEHFVAVLK RFVEYLNMRL RSTQVEQETP TAFLQHCAAN AGIDGKTLKF CYDRLTSLLK TLEVVDMDEF NALSLVANFA ALVGTYSNGF ALILEPYDER YPNIPDPVLQ LACLDASLAI KPVFERFQSV FITSGTLSPI DLYPKLLGFN PVSVRSLAMT LTRDCLCPMV ITRGADQQAV STKFDMRDDP NVIQNYGRIL IGLAQTVPDG IVAFFVSYSY MENIVSKWHE TGILREIMQH KLVFIETTDV VETSLALDNY RRACNCGRGA IFLSVARGKV AEGIDFDRHY GRAVVMYGVP YQYTLSRILR ARLEYLRETF QIKESDFLAF DAVRQAAQCV GRVIRSKKDY GLMVFADKRY NSQDKRGKLP GWITTHLREE VLNLSTDMAM QVARTFMRSM SQPFSHDENT QSLLDQAMVD RLAVEGGWRE ALPALSRKLA PEITMHLS // ID A5DM02_PICGU Unreviewed; 843 AA. AC A5DM02; DT 12-JUN-2007, integrated into UniProtKB/TrEMBL. DT 22-JUL-2008, sequence version 2. DT 11-MAY-2016, entry version 52. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EDK40205.2}; GN ORFNames=PGUG_04303 {ECO:0000313|EMBL:EDK40205.2}; OS Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM OS 1539 / NBRC 10279 / NRRL Y-324) (Yeast) (Candida guilliermondii). OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; OC Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Meyerozyma. OX NCBI_TaxID=294746 {ECO:0000313|EMBL:EDK40205.2, ECO:0000313|Proteomes:UP000001997}; RN [1] {ECO:0000313|EMBL:EDK40205.2, ECO:0000313|Proteomes:UP000001997} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL RC Y-324 {ECO:0000313|Proteomes:UP000001997}; RX PubMed=19465905; DOI=10.1038/nature08064; RA Butler G., Rasmussen M.D., Lin M.F., Santos M.A., Sakthikumar S., RA Munro C.A., Rheinbay E., Grabherr M., Forche A., Reedy J.L., RA Agrafioti I., Arnaud M.B., Bates S., Brown A.J., Brunke S., RA Costanzo M.C., Fitzpatrick D.A., de Groot P.W., Harris D., Hoyer L.L., RA Hube B., Klis F.M., Kodira C., Lennard N., Logue M.E., Martin R., RA Neiman A.M., Nikolaou E., Quail M.A., Quinn J., Santos M.C., RA Schmitzberger F.F., Sherlock G., Shah P., Silverstein K.A., RA Skrzypek M.S., Soll D., Staggs R., Stansfield I., Stumpf M.P., RA Sudbery P.E., Srikantha T., Zeng Q., Berman J., Berriman M., RA Heitman J., Gow N.A., Lorenz M.C., Birren B.W., Kellis M., Cuomo C.A.; RT "Evolution of pathogenicity and sexual reproduction in eight Candida RT genomes."; RL Nature 459:657-662(2009). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CH408159; EDK40205.2; -; Genomic_DNA. DR RefSeq; XP_001483574.1; XM_001483524.1. DR STRING; 294746.XP_001483574.1; -. DR EnsemblFungi; EDK40205; EDK40205; PGUG_04303. DR GeneID; 5125447; -. DR KEGG; pgu:PGUG_04303; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; A5DM02; -. DR KO; K10844; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000001997; Unassembled WGS sequence. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000001997}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Membrane {ECO:0000256|SAM:Phobius}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000001997}; KW Transmembrane {ECO:0000256|SAM:Phobius}; KW Transmembrane helix {ECO:0000256|SAM:Phobius}. FT TRANSMEM 12 32 Helical. {ECO:0000256|SAM:Phobius}. FT DOMAIN 60 348 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 843 AA; 96528 MW; C8970EB9A9016C4F CRC64; MVVLEVRVPL NSLVILFYYL VTFSTFSLIL PLTSSLSHPH TFAQISSLDP PGSMKFFIDD LPVLFPYPRI YPEQYAYMSD IKKTLDVGGN CILEMPSGTG KTISLLSLTV AYQMHYPEHR KIVYCSRTMS EIEKALIELH KLMEYRAEEL GYVEDFRGLG LTSRKNLCIH PTISKERKGN VVDEKCRRIT NGQLKQKIES GAVSPDLQAN NPEAYTLCNY HENMNDMDSH SYVPNGVYSF DGLINYSKEK QICPYFTVRR MIPFCNIIIY SYHYLLDPKI AERVSKELSK DSIIIFDEAH NIDNVCIESL SLDLTDDTLK RATRGANKLG EAVDEMKAQD SEKLQNEYEK LVEGLRDAEI ARDEELFMSN PALPQDLLDE AIPGNIRKAE HFISFLKRFI EYLKTRMKVL HVISETPLSF LQHLKDLTFI ERKPLRFCSE RLSLLVRTLE LSEIEDFNAL KDIATFATLV STYDRGFQLI LEPFETDGAT VPNPILHFTC LDASIAMKPV FDRFSSVIIT SGTISPLDMY PRMLNFQTVI QESYTMTLAR RSFLPMIVTK GADQVSISSQ FEIRNDPSVV RNYGSLLIEF SKITPDGMVV FFPSYLYMES IISMWQTMGV LDEVWKHKLI LVETPDAQVT SLALETYRKA CSNGRGAVLL SVARGKVSEG IDFDHHYGRT VLMIGIPFQY TESRILKARL EFLRDNYQIR ENDFLSFDAM RHAAQCLGRV LRGKDDYGIM VLADRRFRRK KNQLPKWIAQ ALYESDENLS TDMALANAKK FLRSLAQPTN PKDQEGVSVW DIHQLEKFQN EHQLQVASAD FKTNKAKDED GFMDIDEADL ELL // ID A5DY73_LODEL Unreviewed; 325 AA. AC A5DY73; DT 12-JUN-2007, integrated into UniProtKB/TrEMBL. DT 12-JUN-2007, sequence version 1. DT 13-APR-2016, entry version 45. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EDK44132.1}; DE Flags: Fragment; GN ORFNames=LELG_02310 {ECO:0000313|EMBL:EDK44132.1}; OS Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / OS NBRC 1676 / NRRL YB-4239) (Yeast) (Saccharomyces elongisporus). OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; OC Saccharomycetes; Saccharomycetales; Debaryomycetaceae; OC Candida/Lodderomyces clade; Lodderomyces. OX NCBI_TaxID=379508 {ECO:0000313|EMBL:EDK44132.1, ECO:0000313|Proteomes:UP000001996}; RN [1] {ECO:0000313|EMBL:EDK44132.1, ECO:0000313|Proteomes:UP000001996} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239 RC {ECO:0000313|Proteomes:UP000001996}; RX PubMed=19465905; DOI=10.1038/nature08064; RA Butler G., Rasmussen M.D., Lin M.F., Santos M.A., Sakthikumar S., RA Munro C.A., Rheinbay E., Grabherr M., Forche A., Reedy J.L., RA Agrafioti I., Arnaud M.B., Bates S., Brown A.J., Brunke S., RA Costanzo M.C., Fitzpatrick D.A., de Groot P.W., Harris D., Hoyer L.L., RA Hube B., Klis F.M., Kodira C., Lennard N., Logue M.E., Martin R., RA Neiman A.M., Nikolaou E., Quail M.A., Quinn J., Santos M.C., RA Schmitzberger F.F., Sherlock G., Shah P., Silverstein K.A., RA Skrzypek M.S., Soll D., Staggs R., Stansfield I., Stumpf M.P., RA Sudbery P.E., Srikantha T., Zeng Q., Berman J., Berriman M., RA Heitman J., Gow N.A., Lorenz M.C., Birren B.W., Kellis M., Cuomo C.A.; RT "Evolution of pathogenicity and sexual reproduction in eight Candida RT genomes."; RL Nature 459:657-662(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CH981526; EDK44132.1; -; Genomic_DNA. DR RefSeq; XP_001525753.1; XM_001525703.1. DR STRING; 379508.XP_001525753.1; -. DR EnsemblFungi; EDK44132; EDK44132; LELG_02310. DR GeneID; 5233258; -. DR KEGG; lel:LELG_02310; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; A5DY73; -. DR KO; K10844; -. DR OMA; FHENLNE; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000001996; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:InterPro. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SUPFAM; SSF52540; SSF52540; 2. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW Complete proteome {ECO:0000313|Proteomes:UP000001996}; KW Reference proteome {ECO:0000313|Proteomes:UP000001996}. FT DOMAIN 7 295 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT NON_TER 325 325 {ECO:0000313|EMBL:EDK44132.1}. SQ SEQUENCE 325 AA; 37547 MW; A343C0E28F9366CB CRC64; MKFYIDDLPV LFPYPKIYPE QYAYMSDIKK TLDVGGNCIL EMPSGTGKTV SLLSLTVAYQ MHYPEHRKIV YCSRTMSEIE KALIELHKLM EFRASALGYV EDFRGLGLTS RKNLCLNPLI SRERKGNVVD EMCRRVTNGQ LKEKIERGVV TEDMQERDPE KYSLCSFHEN LNELDQHDLI PEGVYSFDAL IKYCKQIGTC PYFTVRRMIP FCNIIIYSYH YLLDPKIADR VSRELSKDSI IIFDEAHNID NVCIEALSLD LTEDALKRAT RGANKLADAV DEMKQQDSEK LQNEYEQLVE GLRQAEVARE EELFMSNPIL PQDLL // ID A5KEA4_PLAVS Unreviewed; 1041 AA. AC A5KEA4; DT 10-JUL-2007, integrated into UniProtKB/TrEMBL. DT 10-JUL-2007, sequence version 1. DT 11-MAY-2016, entry version 59. DE SubName: Full=DNA excision-repair helicase, putative {ECO:0000313|EMBL:EDL42322.1}; GN ORFNames=PVX_087010 {ECO:0000313|EMBL:EDL42322.1}; OS Plasmodium vivax (strain Salvador I). OC Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; OC Plasmodiidae; Plasmodium; Plasmodium (Plasmodium). OX NCBI_TaxID=126793 {ECO:0000313|Proteomes:UP000008333}; RN [1] {ECO:0000313|EMBL:EDL42322.1, ECO:0000313|Proteomes:UP000008333} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Salvador I {ECO:0000313|EMBL:EDL42322.1, RC ECO:0000313|Proteomes:UP000008333}; RX PubMed=18843361; DOI=10.1038/nature07327; RA Carlton J.M., Adams J.H., Silva J.C., Bidwell S.L., Lorenzi H., RA Caler E., Crabtree J., Angiuoli S.V., Merino E.F., Amedeo P., RA Cheng Q., Coulson R.M., Crabb B.S., Del Portillo H.A., Essien K., RA Feldblyum T.V., Fernandez-Becerra C., Gilson P.R., Gueye A.H., Guo X., RA Kang'a S., Kooij T.W., Korsinczky M., Meyer E.V., Nene V., Paulsen I., RA White O., Ralph S.A., Ren Q., Sargeant T.J., Salzberg S.L., RA Stoeckert C.J., Sullivan S.A., Yamamoto M.M., Hoffman S.L., RA Wortman J.R., Gardner M.J., Galinski M.R., Barnwell J.W., RA Fraser-Liggett C.M.; RT "Comparative genomics of the neglected human malaria parasite RT Plasmodium vivax."; RL Nature 455:757-763(2008). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:EDL42322.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AAKM01002770; EDL42322.1; -; Genomic_DNA. DR RefSeq; XP_001608346.1; XM_001608296.1. DR ProteinModelPortal; A5KEA4; -. DR GeneID; 5471221; -. DR KEGG; pvx:PVX_087010; -. DR EuPathDB; PlasmoDB:PVX_087010; -. DR HOGENOM; HOG000205390; -. DR InParanoid; A5KEA4; -. DR KO; K10844; -. DR Proteomes; UP000008333; Chromosome 7. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR006935; Helicase/UvrB_N. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR Pfam; PF04851; ResIII; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 2. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EDL42322.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000008333}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EDL42322.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EDL42322.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EDL42322.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000008333}. FT DOMAIN 8 416 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 1041 AA; 116837 MW; BE64E596DE260DD3 CRC64; MVVFQLDDLE VFFPYDYIYP EQYAYMRYLK KTLDSEGHCV LEMPTGTGKT VAIFSLITSY QHGKNDEGKF IFCTRTVAEM EKSLIELKKV IQYRVDTLRR RVVSGEVKGE RADERAEDEM KDQTGEQTTA NDANDANDAN QANDATTANH ANDATAAQRR SGDLQGDILA IGISARRCMC VNERVLRKHE REKIDEECRK LTATFVREKK YISQRISKLG STHSDRVSEF IVKNRQHIDV EDYFDIYHTR NSLEEYNDIG LCGYYENYKK EFLFELIQPG VYTIEDLKVM CKRYKNAQNE TVPICPYFCA KKVIEVAKVI VLNYQYVIDP KVSKSLFIGR EVNSRVNLHK RDIIVFDEAH NIDSVCLEAL SVNIDRNVLN KATANIKKLL SKIEASKVLN EEKLREECTR ILRRVREEKR GGEALGEAMS EAVKEAVGEA ANEAANEAVK EALTEAGSGG GAPGKRRPQE SKGAEVYFDE DLNLIFPRAA NPSGVDDDAP WGGKQAKGGG LLEGLAKFLG QSVSSLLPGG SGQVAGSSLL PGGSGQVADS SLFPEGSKDS HGNGSSSSAA AANAATPRED PTELHYSPLL MEDAVKNVVL PGNIRKSEHF LNLMRIVVMY LRKYVNIYEV TSEGPLSFLY KCERETKLDT SFFKFCFDRL KALLNALQIV TVDDYSALNV VCNFCTLLGS YFQGFIIICE PYPEATGIYD PVIQFACLDS SIAMKAVIGK YRSVILTSGT ITPLELYPKL LNFKTVLTAS FPMSFDRNCV CPLIVTNSSD LVPLSSQFSL RSDLTVIKNY GMLLVEMCKT IPDGIVAYFP SYIYMEEVIS SWYELGIITS ILECKLIFIE TKDIVSTTIA LHNFKRACDL GKGAVFLSIC RGKIAEGIDF DKHYGKCVIL FGIPYQYTLS RILKSRLDFL KETYNIQENE FLTFDAMRQA SQCVGRIIRN KKDYGIMIFA DIRYARNDKK SKLPPWIIKC MELSNVNLTV STAVNISRKF LLNMSQEYKE TGQTKLSQEL TSDQPRCWAL VKSALNLDDF L // ID A6M309_CLOB8 Unreviewed; 761 AA. AC A6M309; DT 24-JUL-2007, integrated into UniProtKB/TrEMBL. DT 24-JUL-2007, sequence version 1. DT 11-MAY-2016, entry version 55. DE SubName: Full=DEAD_2 domain protein {ECO:0000313|EMBL:ABR36989.1}; GN OrderedLocusNames=Cbei_4883 {ECO:0000313|EMBL:ABR36989.1}; OS Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium OS acetobutylicum). OC Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; OC Clostridium. OX NCBI_TaxID=290402 {ECO:0000313|EMBL:ABR36989.1, ECO:0000313|Proteomes:UP000000565}; RN [1] {ECO:0000313|EMBL:ABR36989.1, ECO:0000313|Proteomes:UP000000565} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 51743 / NCIMB 8052 {ECO:0000313|Proteomes:UP000000565}; RG US DOE Joint Genome Institute; RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., RA Pitluck S., Sims D., Brettin T., Bruce D., Tapia R., Brainard J., RA Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., RA Mikhailova N., Bennet G., Cann I., Chen J.-S., Contreras A.L., RA Jones D., Kashket E., Mitchell W., Stoddard S., Schwarz W., RA Qureshi N., Young M., Shi Z., Ezeji T., White B., Blaschek H., RA Richardson P.; RT "Complete sequence of Clostridium beijerinckii NCIMB 8052."; RL Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000721; ABR36989.1; -; Genomic_DNA. DR RefSeq; WP_012061033.1; NC_009617.1. DR ProteinModelPortal; A6M309; -. DR STRING; 290402.Cbei_4883; -. DR EnsemblBacteria; ABR36989; ABR36989; Cbei_4883. DR KEGG; cbe:Cbei_4883; -. DR PATRIC; 19354112; VBICloBei69853_5071. DR eggNOG; ENOG4107QX6; Bacteria. DR eggNOG; COG1199; LUCA. DR HOGENOM; HOG000183657; -. DR OMA; DYNYYFD; -. DR OrthoDB; EOG61P6NQ; -. DR BioCyc; CBEI290402:GHL5-4985-MONOMER; -. DR Proteomes; UP000000565; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 4. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR014001; Helicase_ATP-bd. DR InterPro; IPR001650; Helicase_C. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF00270; DEAD; 1. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00487; DEXDc; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 5. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. DR PROSITE; PS51194; HELICASE_CTER; 1. PE 4: Predicted; KW Complete proteome {ECO:0000313|Proteomes:UP000000565}; KW Reference proteome {ECO:0000313|Proteomes:UP000000565}. FT DOMAIN 184 440 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT DOMAIN 596 761 Helicase C-terminal. FT {ECO:0000259|PROSITE:PS51194}. SQ SEQUENCE 761 AA; 89340 MW; CCF6E18F30A1653F CRC64; MDKILIRESV RNLVEFCLKK GDIDNRFSGS ARAVEGVRAH QKLQEDNGRV YENYEKEVYL THEFETNKSL IYIEGRADGI ITEKDKVIIE EIKSTYKNFA YIDDLNEVHW AQAKVYAFIY GNQNNLEEIY VRLSYMQLET NEVKSFEKKF TIGELEEFIS DLLREYERFS VLIFKWKNIR DETIKVLNFP FEKYREGQRK LINVSYQTIK EEEILFVQAP TGIGKTISTI FPAVKAISEG IGEKIIYLTA KTINREVAEE TFERLRQEGL KFRTITITAK EKTCINDDFD CNPEKCIYAK DYYGKVKKVI TNVIEREERI STEILKEYAE KYQVCPFELS LDISTYCDGI IGDYNYIFDP RVSLSRVLES KGNIVLVDEA HNLIDRSRNM YSASLYKSQI LNCKKITKGK LNKLHSLLGK INDYFINLRN ECDHREVKSF YEEEHPKELS KYLQLYLKES EEVLVRGNRF DGYEDILKLY FDMNAFTSTT QLYDENYRTC IEKDSQEIKL TLYCVNPAKN LREYLGKCYS VIFFSATISP IKYYVNMLGG DDNTYRLKLP SPFNKENLKV HISPINIRYS YRKRTLSSVK DKICGFIKQQ IGNYMIFSPS YAYMEELYSH MEESKLEEFN LMKQKPNMTE EEKSEFLRRF KNSNNLLMFC VLGGMFSEGI DLPGDQLIGS IIIGVGYPMV DMTNEVIKDF YKEDGYDYAY VFPGINKIQQ AVGRVIRTET DKGRVLLIDD RYINNKYSVL LPNEWYPINK Y // ID A6R8S4_AJECN Unreviewed; 683 AA. AC A6R8S4; DT 21-AUG-2007, integrated into UniProtKB/TrEMBL. DT 21-AUG-2007, sequence version 1. DT 11-MAY-2016, entry version 49. DE SubName: Full=DNA repair helicase RAD3 {ECO:0000313|EMBL:EDN09548.1}; GN ORFNames=HCAG_06715 {ECO:0000313|EMBL:EDN09548.1}; OS Ajellomyces capsulatus (strain NAm1 / WU24) (Darling's disease fungus) OS (Histoplasma capsulatum). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; OC Eurotiomycetidae; Onygenales; Ajellomycetaceae; Histoplasma. OX NCBI_TaxID=339724 {ECO:0000313|EMBL:EDN09548.1, ECO:0000313|Proteomes:UP000009297}; RN [1] {ECO:0000313|Proteomes:UP000009297} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=NAm1 / WU24 {ECO:0000313|Proteomes:UP000009297}; RX PubMed=19717792; DOI=10.1101/gr.087551.108; RA Sharpton T.J., Stajich J.E., Rounsley S.D., Gardner M.J., RA Wortman J.R., Jordar V.S., Maiti R., Kodira C.D., Neafsey D.E., RA Zeng Q., Hung C.-Y., McMahan C., Muszewska A., Grynberg M., RA Mandel M.A., Kellner E.M., Barker B.M., Galgiani J.N., Orbach M.J., RA Kirkland T.N., Cole G.T., Henn M.R., Birren B.W., Taylor J.W.; RT "Comparative genomic analyses of the human fungal pathogens RT Coccidioides and their relatives."; RL Genome Res. 19:1722-1731(2009). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CH476660; EDN09548.1; -; Genomic_DNA. DR RefSeq; XP_001539110.1; XM_001539060.1. DR STRING; 339724.XP_001539110.1; -. DR EnsemblFungi; EDN09548; EDN09548; HCAG_06715. DR GeneID; 5445556; -. DR KEGG; aje:HCAG_06715; -. DR EuPathDB; FungiDB:HCAG_06715; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR KO; K10844; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000009297; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 3. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EDN09548.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000009297}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EDN09548.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EDN09548.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EDN09548.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000009297}. FT DOMAIN 1 173 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 134 186 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 683 AA; 78111 MW; 21CF2BFD78BA9706 CRC64; MSEIEKALAE LKALMKYRAQ QLGFAEDFRG LGLTSRKNLC LHPSVKREKS GAVVDARCRS LTAGFVKEKK EKGEDVELCI YHEMPFCKVI IYSYHYLLDP KIAERVSQEL SKDSIVVFDE AHNIDNVCIE SLSIDLTEDS LRKASRGANN LERKIEEMKR SDAEKLQNEY QKLVEGLREA DEARQEEQLM ANPALPDDLL KEAVPGNIRR AEHFVAFLKR FIEYLKTRMK ITHTISETPL SFLAHLKDLT FIERKPLRFC AERLTSLVRT LELMNLEDYQ PLQQVAAFAT LVATYEKGFL LILEPFESET ATVPNPILHF TCLDAAIAIK PVFDRFSSVI VTSGTLSPLE MYPKMLKFTT VLQESYTMTL ARRSFLPMVV TRGSDQAQIS SSFQIRNDPG VVRNYGNLLL EFSRITPDGV VVFFPSYLYM ESIISMWQGM GILDLVWNYK LILVETPDSQ ESSLALETYR TACCNGRGAV LLCVARGKVS EGIDFDHHYG RAVICIGVPF QYTESRILKA RLEFLRENYR IRENDFLSFD AMRHAAQCLG RVIRGKDDYG VMILADRRFQ KRRTQLPKWI SQAMLESETN LSTDMAVATA KSFLRTMAQP FKSKDQEGIS TWSLTDLEYH VKKQREEEDK RLRGEIANNQ IPSDVVNGNR NGRVTTVDEF DENIDQELMM LDA // ID A6TVT2_ALKMQ Unreviewed; 781 AA. AC A6TVT2; DT 21-AUG-2007, integrated into UniProtKB/TrEMBL. DT 21-AUG-2007, sequence version 1. DT 11-MAY-2016, entry version 53. DE SubName: Full=DEAD_2 domain protein {ECO:0000313|EMBL:ABR50300.1}; GN OrderedLocusNames=Amet_4220 {ECO:0000313|EMBL:ABR50300.1}; OS Alkaliphilus metalliredigens (strain QYMF). OC Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; OC Alkaliphilus. OX NCBI_TaxID=293826 {ECO:0000313|EMBL:ABR50300.1, ECO:0000313|Proteomes:UP000001572}; RN [1] {ECO:0000313|Proteomes:UP000001572} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=QYMF {ECO:0000313|Proteomes:UP000001572}; RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., RA Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Schmutz J., RA Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Ye Q., RA Zhou J., Fields M., Richardson P.; RT "Complete sequence of Alkaliphilus metalliredigens QYMF."; RL Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000724; ABR50300.1; -; Genomic_DNA. DR RefSeq; WP_012065248.1; NC_009633.1. DR ProteinModelPortal; A6TVT2; -. DR STRING; 293826.Amet_4220; -. DR EnsemblBacteria; ABR50300; ABR50300; Amet_4220. DR KEGG; amt:Amet_4220; -. DR eggNOG; ENOG4107QX6; Bacteria. DR eggNOG; COG1199; LUCA. DR HOGENOM; HOG000183657; -. DR KO; K10844; -. DR OMA; DYNYYFD; -. DR OrthoDB; EOG61P6NQ; -. DR BioCyc; AMET293826:GI5P-4274-MONOMER; -. DR Proteomes; UP000001572; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 4. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR014001; Helicase_ATP-bd. DR InterPro; IPR001650; Helicase_C. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00487; DEXDc; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 3. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. DR PROSITE; PS51194; HELICASE_CTER; 1. PE 4: Predicted; KW Complete proteome {ECO:0000313|Proteomes:UP000001572}; KW Reference proteome {ECO:0000313|Proteomes:UP000001572}. FT DOMAIN 183 443 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT DOMAIN 588 775 Helicase C-terminal. FT {ECO:0000259|PROSITE:PS51194}. SQ SEQUENCE 781 AA; 90960 MW; 38F58FC57BBFF64E CRC64; MEEQREIKVS VGNLVEFVLR SGNLDSGFSG GSSAIEGTRA HQKIQKNYGE NDTSEITLKY SFDYQEHKMT VKGRADGIIL EDEKVIIDEI KTVTKSLDEI EENDYPIHWG QAQCYAYIYA KENNLEAIGV QLTYYQLETQ EIKRFRRTIT ICELEAFFYD LIKQYFQWAH RIEKWEMKRD LSIKDMKFPF EAYRKGQREL AVATYKTIRG KKKLFAQAPT GTGKTISTLF PGVKAMGEGM TSKIFYLTAK TITRQVAEEA IVKIREKGLA YKTITLTAKD KICFEKVGSC NTDECRFAKG HFDRLNEALS DVFDHEDAFT RDVMETYARK HHICPFEFSL ELALWSDCII CDYNYVFDPR VYLKRFFQEE GKNYTFLIDE AHNLVDRSRT MFSAELNKGT FLELKRVMKD KSPKVAKTLN KLNSFMIKAK KNCGENEFYI QKEAPLEMDQ LLRHFISEAA IWLKEGRGKG GYEALLELYF SAFAFLRILE FYDDRYTTYV EKRDKDVVIK LFCLDPSYLL GQAVRRGGAA IFFSATLTPL NYFRDILGGH EEDYQIQLSS PFDKENLKLM VANDISTKYK DRQESYEPII KYIKEVVRGK EGNYLVFFPS YEYLRRVLEL FREACPDIKV LEQGTTMTEP EREGFLRQFK SKPSETLIGF VVLGGIFSEG IDLTGNRLIG TIIIGVGLPQ ITRETDIVMN YFQEKKRPGY EYAYTYPGMN KVLQAAGRVI RREKDRGVVF LIDERFTSYR YQRLFPKEWK HYLTISNRST IDTLLEAFWS E // ID A7AVA1_BABBO Unreviewed; 822 AA. AC A7AVA1; DT 11-SEP-2007, integrated into UniProtKB/TrEMBL. DT 11-SEP-2007, sequence version 1. DT 11-MAY-2016, entry version 47. DE SubName: Full=DNA excision repair helicase {ECO:0000313|EMBL:EDO05727.1}; GN ORFNames=BBOV_IV001300 {ECO:0000313|EMBL:EDO05727.1}; OS Babesia bovis. OC Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Piroplasmida; OC Babesiidae; Babesia. OX NCBI_TaxID=5865 {ECO:0000313|EMBL:EDO05727.1, ECO:0000313|Proteomes:UP000002173}; RN [1] {ECO:0000313|EMBL:EDO05727.1, ECO:0000313|Proteomes:UP000002173} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=T2Bo {ECO:0000313|EMBL:EDO05727.1, RC ECO:0000313|Proteomes:UP000002173}; RX PubMed=17953480; DOI=10.1371/journal.ppat.0030148; RA Brayton K.A., Lau A.O.T., Herndon D.R., Hannick L., Kappmeyer L.S., RA Berens S.J., Bidwell S.L., Brown W.C., Crabtree J., Fadrosh D., RA Feldblum T., Forberger H.A., Haas B.J., Howell J.M., Khouri H., RA Koo H., Mann D.J., Norimine J., Paulsen I.T., Radune D., Ren Q., RA Smith R.K. Jr., Suarez C.E., White O., Wortman J.R., Knowles D.P. Jr., RA McElwain T.F., Nene V.M.; RT "Genome sequence of Babesia bovis and comparative analysis of RT apicomplexan hemoprotozoa."; RL PLoS Pathog. 3:1401-1413(2007). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:EDO05727.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AAXT01000004; EDO05727.1; -; Genomic_DNA. DR RefSeq; XP_001609295.1; XM_001609245.1. DR ProteinModelPortal; A7AVA1; -. DR EnsemblProtists; EDO05727; EDO05727; BBOV_IV001300. DR GeneID; 5477514; -. DR KEGG; bbo:BBOV_IV001300; -. DR EuPathDB; PiroplasmaDB:BBOV_IV001300; -. DR InParanoid; A7AVA1; -. DR KO; K10844; -. DR Proteomes; UP000002173; Partially assembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 2. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EDO05727.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000002173}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EDO05727.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EDO05727.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EDO05727.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000002173}. FT DOMAIN 8 352 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 822 AA; 93274 MW; FDD0A724DAAE75A5 CRC64; MVRFWLDGIE VFFPYPQIYP EQLAYLRSLK STLDAQGHAV LEMPTGTGKT VALFSLITSY QLARPEMGRL IYCTRTIPEM EKSLLELKEV IKYRDAELEK DRVAMEASST SDSTGEPSSQ SGSSNTKNRH DLTSVWRRIE YEEGKPPSSD EHVLRFDGTS VQGVPTAPVV HHSRVEELPD IEHYTTMGLC GHYEYLERVW NPTMIPSGVY TLEGLKEYCS NFRHPLSGVS TPICPYFAAR RALDIANVVV LNYQYLLDPK VSEAAFSNLY STLPSSEKKE KDAPQKPAEN KAKLPIVVVF DEAHNIDNVC IEAMSVEIND DTLDEAYANL DILAGHVARQ REKDERQLLE EYRRLAERIV DSSIDIEGYM SPVLPDDVIQ KAIPGNIRRA EHFISFLRTV VGYLKQYLKV QEPRSEGPLM FLHRFEQETG IAYSTLQYTY NRMKSLLNTL SITALGDLSS IQLVADFCTL VGTYTTGFIV IVEPYPQGSL YEPVIQFSCL DASIAMQPVV ENFQSVILTS GTISPLEMYP KILNFTPVLT QSLPMSLDRD CLCPLIVAKG ANQLQMSTRY ELRNDVTVLR NYGTLLIELC KHIPDGVVCF FPSYAYMELI VSHWYECGII ASIMEHKLIF METKDVVTTT MALHNYRKAC DVGRGALFLS ICRGKVAEGI DFDRHYGRCV ILIGVPFQYT LSRVLKARLD FMRTKYGIME NEFLTFDAMR QAAQCVGRII RNKSDFGLMV FADSRYSRAD KRSKLPPWIL KNLEPGNMSL TTESAVTAAK VLLRNIAQDY VSSRLTRFDQ DMLNDEAKWW SSVQNVLRLS KY // ID A7EW97_SCLS1 Unreviewed; 616 AA. AC A7EW97; DT 11-SEP-2007, integrated into UniProtKB/TrEMBL. DT 11-SEP-2007, sequence version 1. DT 11-MAY-2016, entry version 57. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EDN93739.1}; GN ORFNames=SS1G_09606 {ECO:0000313|EMBL:EDN93739.1}; OS Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) (White OS mold) (Whetzelinia sclerotiorum). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; OC Helotiales; Sclerotiniaceae; Sclerotinia. OX NCBI_TaxID=665079 {ECO:0000313|EMBL:EDN93739.1, ECO:0000313|Proteomes:UP000001312}; RN [1] {ECO:0000313|Proteomes:UP000001312} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 18683 / 1980 / Ss-1 {ECO:0000313|Proteomes:UP000001312}; RX PubMed=21876677; DOI=10.1371/journal.pgen.1002230; RA Amselem J., Cuomo C.A., van Kan J.A.L., Viaud M., Benito E.P., RA Couloux A., Coutinho P.M., de Vries R.P., Dyer P.S., Fillinger S., RA Fournier E., Gout L., Hahn M., Kohn L., Lapalu N., Plummer K.M., RA Pradier J.-M., Quevillon E., Sharon A., Simon A., ten Have A., RA Tudzynski B., Tudzynski P., Wincker P., Andrew M., Anthouard V., RA Beever R.E., Beffa R., Benoit I., Bouzid O., Brault B., Chen Z., RA Choquer M., Collemare J., Cotton P., Danchin E.G., Da Silva C., RA Gautier A., Giraud C., Giraud T., Gonzalez C., Grossetete S., RA Gueldener U., Henrissat B., Howlett B.J., Kodira C., Kretschmer M., RA Lappartient A., Leroch M., Levis C., Mauceli E., Neuveglise C., RA Oeser B., Pearson M., Poulain J., Poussereau N., Quesneville H., RA Rascle C., Schumacher J., Segurens B., Sexton A., Silva E., Sirven C., RA Soanes D.M., Talbot N.J., Templeton M., Yandava C., Yarden O., RA Zeng Q., Rollins J.A., Lebrun M.-H., Dickman M.; RT "Genomic analysis of the necrotrophic fungal pathogens Sclerotinia RT sclerotiorum and Botrytis cinerea."; RL PLoS Genet. 7:E1002230-E1002230(2011). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CH476633; EDN93739.1; -; Genomic_DNA. DR RefSeq; XP_001589884.1; XM_001589834.1. DR ProteinModelPortal; A7EW97; -. DR EnsemblFungi; EDN93739; EDN93739; SS1G_09606. DR GeneID; 5485895; -. DR KEGG; ssl:SS1G_09606; -. DR EuPathDB; FungiDB:SS1G_09606; -. DR InParanoid; A7EW97; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000001312; Unassembled WGS sequence. DR GO; GO:0005829; C:cytosol; IEA:EnsemblFungi. DR GO; GO:0000112; C:nucleotide-excision repair factor 3 complex; IEA:EnsemblFungi. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0000717; P:nucleotide-excision repair, DNA duplex unwinding; IEA:EnsemblFungi. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 3. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000001312}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000001312}. FT DOMAIN 1 256 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 616 AA; 70494 MW; D2229E0301BD3AA3 CRC64; MRTLDAGGHC VLEMPSGTGK TISLLSLIVA YQQYYPEHRK LIYCSRTMSE IEKALAELKA LMKYRAEQLG HQEDFRGLGL TSRKNLCLHP SVKREKSGAV VDARCRSLTA GFVKEKKERG EDVPVCVYHE NLDLLEPHNL IPNGVWTLDG IMRYGEDHKQ CPYFTSRRMM SFCNVIIYSY HYLLDPKIAE RVSKELSKDC IVVFDEAHNI DNVCIESLST DITDDSLRKA TRGAINLENK ISDLRDSDSE KLKDEYAKLV EGLRGADEAR AEDAFMSNPA LPDDLLKEAV PGNIRRAEHF VTFLKRFIEY LKKTRMKVRQ VISETPASFL AHLREHTFIE KKPLRFCAER LTSLVRTLEL TNIEDYQPLQ EVATFATLVA TYEKGFLLIL EPYESDTAEV PNPVLHFTCL DAAIAIKPVF ERFSSVIITS GTISPLEMYP KMLDFECVVQ ESYPMTLARH GMVVFFPSYL YMESIIKTYR TACCNGRGAI LLCVARGKVS EGIDFDHQYG RTVICIGVPF QYTESRILKA RLEFLRETYR IRENDFLSFD AMRHAAQCLG RVLRGKDDYG IMVLADRRFL KKRAQLPKWI NQAILDSEVN LSTDMAYMER AGFREV // ID A7I7C4_METB6 Unreviewed; 712 AA. AC A7I7C4; DT 11-SEP-2007, integrated into UniProtKB/TrEMBL. DT 11-SEP-2007, sequence version 1. DT 11-MAY-2016, entry version 54. DE SubName: Full=DEAD_2 domain protein {ECO:0000313|EMBL:ABS55635.1}; GN OrderedLocusNames=Mboo_1117 {ECO:0000313|EMBL:ABS55635.1}; OS Methanoregula boonei (strain 6A8). OC Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; OC Methanoregulaceae; Methanoregula. OX NCBI_TaxID=456442 {ECO:0000313|EMBL:ABS55635.1, ECO:0000313|Proteomes:UP000002408}; RN [1] {ECO:0000313|EMBL:ABS55635.1, ECO:0000313|Proteomes:UP000002408} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=6A8 {ECO:0000313|EMBL:ABS55635.1, RC ECO:0000313|Proteomes:UP000002408}; RG US DOE Joint Genome Institute; RA Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., RA Dalin E., Tice H., Pitluck S., Meincke L., Brettin T., Bruce D., RA Detter J.C., Han C., Tapia R., Gilna P., Schmutz J., Larimer F., RA Land M., Hauser L., Kyrpides N., Kim E., Zinder S., Richardson P.; RT "Complete sequence of Candidatus Methanoregula boonei 6A8."; RL Submitted (JUL-2007) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000780; ABS55635.1; -; Genomic_DNA. DR ProteinModelPortal; A7I7C4; -. DR STRING; 456442.Mboo_1117; -. DR EnsemblBacteria; ABS55635; ABS55635; Mboo_1117. DR KEGG; mbn:Mboo_1117; -. DR eggNOG; arCOG00770; Archaea. DR eggNOG; COG1199; LUCA. DR HOGENOM; HOG000237163; -. DR KO; K10844; -. DR OMA; FAVCGGK; -. DR BioCyc; MBOO456442:GH2T-1137-MONOMER; -. DR Proteomes; UP000002408; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 2. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW Complete proteome {ECO:0000313|Proteomes:UP000002408}; KW Reference proteome {ECO:0000313|Proteomes:UP000002408}. FT DOMAIN 46 351 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 712 AA; 79802 MW; 54D12E7A34A5FAE5 CRC64; MYGFGVQRSL PAKKSGRSAI QKAGYMFTPH PTPIKHPAAN GTPAMDSFDP FFPYSEYRPH QREMLTFAAQ IARDGGIGMI DAPTGSGKSS VISALLAERR GRKIVIAVRT VSQLTTFVRE LALVKKKRPD LKTVYLVGKK SICPLGGEGD IYRRCEGVKT FSTALMRERA ERGALVPIKD PFIVQQIRKM DREHPLLCPY FIASRQFVPG ESGGVKMIPS AQVRSKADRM LDDPVRPQEL GGFSGDICPY ELVLSAAKNA DVVILNYHHL FDRVIREQLY ANLNVEDQDV MLLIDEAHNC GDVIQSVESI ALAQKDIEQA TRELSGMRRL HKGAEAVQHV LPRLSEFMAG LANSSEPEDW FDPGIFDRAI VKGSLWKDMG DIVDELMGLA ETIREKNQKS GEFRETAIER LTLFMYRLSQ SANNPAYLTI YKRTDEGILL EVRNIDPSAP LTEICSTHAC CILISGTLSP VDSFRRLYFN NASVATLALP NSFPKENRII CCANDITTAY SLRQSRENTE KIVQYITVFA ALKKNRAIYF PSYQILESYA SLASSHISRR KIYIEPRDAA GAGAALNEFL SLPAQGDSGI MFAVCGGKWS EGLDYRGEML SGAMVVGLPL APFTRVRKMV IEYFRHKYGD EGEFLCYTLP AINRALQALG RVLRTPEDRG VLVFAERRFL EKRVYSALPL WIRDEMIECD FTKFREVLGK WK // ID A7RNX6_NEMVE Unreviewed; 735 AA. AC A7RNX6; DT 02-OCT-2007, integrated into UniProtKB/TrEMBL. DT 02-OCT-2007, sequence version 1. DT 11-MAY-2016, entry version 58. DE SubName: Full=Predicted protein {ECO:0000313|EMBL:EDO46754.1}; GN ORFNames=v1g180316 {ECO:0000313|EMBL:EDO46754.1}; OS Nematostella vectensis (Starlet sea anemone). OC Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; OC Edwardsiidae; Nematostella. OX NCBI_TaxID=45351 {ECO:0000313|Proteomes:UP000001593}; RN [1] {ECO:0000313|EMBL:EDO46754.1, ECO:0000313|Proteomes:UP000001593} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=CH2 X CH6 {ECO:0000313|Proteomes:UP000001593}; RX PubMed=17615350; DOI=10.1126/science.1139158; RA Putnam N.H., Srivastava M., Hellsten U., Dirks B., Chapman J., RA Salamov A., Terry A., Shapiro H., Lindquist E., Kapitonov V.V., RA Jurka J., Genikhovich G., Grigoriev I.V., Lucas S.M., Steele R.E., RA Finnerty J.R., Technau U., Martindale M.Q., Rokhsar D.S.; RT "Sea anemone genome reveals ancestral eumetazoan gene repertoire and RT genomic organization."; RL Science 317:86-94(2007). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; DS469524; EDO46754.1; -; Genomic_DNA. DR RefSeq; XP_001638817.1; XM_001638767.1. DR UniGene; Nve.8505; -. DR STRING; 45351.NEMVEDRAFT_v1g180316-PA; -. DR EnsemblMetazoa; EDO46754; EDO46754; NEMVEDRAFT_v1g180316. DR GeneID; 5518880; -. DR KEGG; nve:NEMVE_v1g180316; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR HOGENOM; HOG000205390; -. DR InParanoid; A7RNX6; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG70W3CM; -. DR Proteomes; UP000001593; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000001593}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000001593}. FT DOMAIN 1 261 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 251 274 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 735 AA; 84023 MW; 448AA06979C35801 CRC64; MLELKRTLDA KGHCLLEMPS GTGKTVSLLS LIVAYLKNKP LELTKLIYCS RTVPEIEKVM EELKKLTEYY ESETGEKPNI LALALSSRKN LCIHPEVAGE REGKKVDGKC LSMTASFVRL KHKEDSSVPV CNFYEDFDSL GRDEKMPPGS YNLDDLRQFG RKKGWCPYFL ARRAIYHANV IVYSYHYMLD PKIADLVSKE LDKKAVVVFD EAHNIDNVCI DSMSVTISRR TLDRSHANVE SLASVIDRIK ATDAQKLREE YNRLVEGLRQ ASEARDTDIV LSNPVLPDEV LQESVPGNIR KAEHFVGFMR RFIEYLKTRL RIQHVVQESP MSFLQHIYQQ VCIERKPLRF CAERLSSLLR TLEIPEMQDY GPLVLIANFA TLVSTYNKGF NIIIEPFDDR TPTIPNPILH FSCMDASIAV KPVFDRFQSV VITSGTLSPI DMYPKILDFR PVTMATFTMT LARTCLCPMI VSRGSDQVAM TTKFEMREDL AVIRNYGNLL TEMSAVVPDG IVCFFTSYLY MESVVSLWHD QGIISNIQKN KLLFIETTDA AETSLALHNY QKACENGRGA ILLSVARGKV SEGIDFDHHY GRAVIMFGIP YVYTQSRILK ARLEYLREQF NIRENDFLTF DAMRHAAQCV GRAIRGKTDY GIMVFADKRF SKVDKRGKLP KWIQEYLKES LCNLSTDESV QIAKRFLRQM AQPFEREDQL GLSLLTFEQV QSEEFQKRII QSAMA // ID A7TH08_VANPO Unreviewed; 776 AA. AC A7TH08; DT 02-OCT-2007, integrated into UniProtKB/TrEMBL. DT 02-OCT-2007, sequence version 1. DT 11-MAY-2016, entry version 52. DE SubName: Full=Putative uncharacterized protein {ECO:0000313|EMBL:EDO18460.1}; GN ORFNames=Kpol_1032p54 {ECO:0000313|EMBL:EDO18460.1}; OS Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) OS (Kluyveromyces polysporus). OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; OC Saccharomycetes; Saccharomycetales; Saccharomycetaceae; OC Vanderwaltozyma. OX NCBI_TaxID=436907 {ECO:0000313|Proteomes:UP000000267}; RN [1] {ECO:0000313|EMBL:EDO18460.1, ECO:0000313|Proteomes:UP000000267} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 22028 / DSM 70294 {ECO:0000313|Proteomes:UP000000267}; RX PubMed=17494770; DOI=10.1073/pnas.0608218104; RA Scannell D.R., Frank A.C., Conant G.C., Byrne K.P., Woolfit M., RA Wolfe K.H.; RT "Independent sorting-out of thousands of duplicated gene pairs in two RT yeast species descended from a whole-genome duplication."; RL Proc. Natl. Acad. Sci. U.S.A. 104:8397-8402(2007). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; DS480389; EDO18460.1; -; Genomic_DNA. DR RefSeq; XP_001646318.1; XM_001646268.1. DR ProteinModelPortal; A7TH08; -. DR STRING; 436907.XP_001646318.1; -. DR EnsemblFungi; EDO18460; EDO18460; Kpol_1032p54. DR GeneID; 5546747; -. DR KEGG; vpo:Kpol_1032p54; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; A7TH08; -. DR KO; K10844; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000000267; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000000267}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000000267}. FT DOMAIN 7 285 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 776 AA; 89392 MW; 1265726C95F08946 CRC64; MKFYIDDLPV LFPYPKIYPE QYHYMCDMKK TLDAGGNSIL EMPSGTGKTV SLLSLTVAYQ MHYPEHRKII YCSRTMSEIE KALIELENLM DYRSRELGYA EDFRGLGLTS RKNLCLHPQV SKERKGTVVD EKCRRMTNGQ AKRKLESDPE AKVELCDYHE NLYDLEIEDY LPKGVYSFER LLKYCEQKTL CPYFIVRRMI SMCNIIIYSY HYLLDPKIAE RVSREVSKDS IVIFDEAHNI DNVCIESLSL DLTNDMLKRA TKGANALANK IEEVREVDSQ KLQDEYEKLV KGLHTADILE EEEEPLVEVP VLSQDLLTEA IPGNIRRAEH FVSFLKRLIE YLKTRMKVLH VISETPKSFL QHLKQLTFID RKPLRFCSER LSLLVRTLEV SEIEDFNALK DIATFATLVS TYEDGFLLII EPYEIENAAV PNPILRFTCL DASIAIKPVF EKFSSVIITS GTISPLDMYP RMLNFNTVLE KSYAMTLTKK SFLPMIVTKG SDQVAISSRF EIRNDPSIVR NYGSMLVEFA KITPDGMVVF FPSYLYMESI ISMWQTMGIL DEVWKHKLIL VETPDAQETS LALETYRKAC SNGRGAILLS VARGKVSEGI DFDHHYGRTV LMIGIPFQYT ESRILKARLE FLRENYQIRE NDFLSFDAMR HAAQCLGRVL RGKDDYGVMV LADRRFSRRR NQLPKWIAQG LSDADLNLST DMAIANTKQF LRTMAQPTNP KDQQGVSVWN YEELLQHQQE VERKKGNNSR SIGDASVEID DDVEMT // ID A8MCF5_CALMQ Unreviewed; 634 AA. AC A8MCF5; DT 04-DEC-2007, integrated into UniProtKB/TrEMBL. DT 04-DEC-2007, sequence version 1. DT 11-MAY-2016, entry version 47. DE SubName: Full=DEAD_2 domain protein {ECO:0000313|EMBL:ABW01461.1}; GN OrderedLocusNames=Cmaq_0620 {ECO:0000313|EMBL:ABW01461.1}; OS Caldivirga maquilingensis (strain ATCC 700844 / DSM 13496 / JCM 10307 OS / IC-167). OC Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; OC Thermoproteaceae; Caldivirga. OX NCBI_TaxID=397948 {ECO:0000313|EMBL:ABW01461.1, ECO:0000313|Proteomes:UP000001137}; RN [1] {ECO:0000313|EMBL:ABW01461.1, ECO:0000313|Proteomes:UP000001137} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 700844 / DSM 13496 / JCM 10307 / IC-167 RC {ECO:0000313|Proteomes:UP000001137}; RG US DOE Joint Genome Institute; RA Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., RA Dalin E., Tice H., Pitluck S., Saunders E., Brettin T., Bruce D., RA Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., RA Kyrpides N., Ivanova N., Biddle J.F., Zhang Z., Fitz-Gibbon S.T., RA Lowe T.M., Saltikov C., House C.H., Richardson P.; RT "Complete sequence of Caldivirga maquilingensis IC-167."; RL Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000852; ABW01461.1; -; Genomic_DNA. DR RefSeq; WP_012185681.1; NC_009954.1. DR STRING; 397948.Cmaq_0620; -. DR PRIDE; A8MCF5; -. DR EnsemblBacteria; ABW01461; ABW01461; Cmaq_0620. DR GeneID; 5710215; -. DR KEGG; cma:Cmaq_0620; -. DR eggNOG; arCOG00770; Archaea. DR eggNOG; COG1199; LUCA. DR HOGENOM; HOG000222348; -. DR KO; K10844; -. DR OMA; RENYLTI; -. DR BioCyc; CMAQ397948:GH9M-635-MONOMER; -. DR Proteomes; UP000001137; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 4. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW Complete proteome {ECO:0000313|Proteomes:UP000001137}; KW Reference proteome {ECO:0000313|Proteomes:UP000001137}. FT DOMAIN 13 268 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 634 AA; 70884 MW; 3B08620440F525E0 CRC64; MVHLNAGLMI NTKVSKYLPY VGWRPLQAKI ADFIYSNLGE GKGIVVEAPT GVGKTAAALA AALAYSEGEP IKIIYMIRTN NQAAAPMREL SRMLKIRGVF IPYVLIRNRA RMCCISSTSR LPYRDFLMEC NYLKRTGECN YYVKLKSNGV DSSLFMDTVA GLESPGEYVK SVCKLGVCPY DASRMLIDES RVIILSYYYL FSLNAPEVVD VDLKSSILII DEAHNLPYAI LDLNTQYLTE AMVKVALSDV KRFVNDVNVK AGALRALASI RALFRDLFND VSEQGERRVD SSKILEYFND IEYLTEASSE VLASKRSRGI LLAGTPLSDI IDFYRSVIKM PKDKALFLSM GNDGKAIVSR LMDPSAAASG VMNNAYSFIV MSGTMPPTRL FTSLLGVKVK VSELRIGLTE YVKSSNVKAV VYGEVTTKYT ERSEEQYSRI AQALISIYDA VKHGVLAVFP SYDTLKATRK YIRHGVDLIV EIGTTTIEDV LESIKVNPHK LILAVAGGKL VEGIEFRFND VNYIDAVAIV GVPYPEPNDF MNGLVDVVKS RANYDDAWHA VYTWNALVKV KQAIGRGLRS DKDRVFIILM DYRFRDNPVI WREMTNYLPN IEVASNEDEL ISMLREFTSI NTNQ // ID A8MJA6_ALKOO Unreviewed; 800 AA. AC A8MJA6; DT 04-DEC-2007, integrated into UniProtKB/TrEMBL. DT 04-DEC-2007, sequence version 1. DT 11-MAY-2016, entry version 47. DE SubName: Full=DEAD_2 domain protein {ECO:0000313|EMBL:ABW19888.1}; GN OrderedLocusNames=Clos_2356 {ECO:0000313|EMBL:ABW19888.1}; OS Alkaliphilus oremlandii (strain OhILAs) (Clostridium oremlandii OS (strain OhILAs)). OC Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; OC Alkaliphilus. OX NCBI_TaxID=350688 {ECO:0000313|EMBL:ABW19888.1, ECO:0000313|Proteomes:UP000000269}; RN [1] {ECO:0000313|EMBL:ABW19888.1, ECO:0000313|Proteomes:UP000000269} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=OhILAs {ECO:0000313|EMBL:ABW19888.1, RC ECO:0000313|Proteomes:UP000000269}; RG US DOE Joint Genome Institute; RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., RA Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., RA Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., RA Stolz J.F., Dawson A., Fisher E., Crable B., Perera E., Lisak J., RA Ranganathan M., Basu P., Richardson P.; RT "Complete genome of Alkaliphilus oremlandii OhILAs."; RL Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases. RN [2] {ECO:0000313|Proteomes:UP000000269} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=OhILAs {ECO:0000313|Proteomes:UP000000269}; RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., RA Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., RA Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., RA Stolz J.F., Dawson A., Fisher E., Crable B., Perera E., Lisak J., RA Ranganathan M., Basu P., Richardson P.; RT "Complete genome of Alkaliphilus oremlandii OhILAs."; RL Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000853; ABW19888.1; -; Genomic_DNA. DR STRING; 350688.Clos_2356; -. DR EnsemblBacteria; ABW19888; ABW19888; Clos_2356. DR KEGG; aoe:Clos_2356; -. DR PATRIC; 20870086; VBIAlkOre124042_2469. DR eggNOG; ENOG4107QX6; Bacteria. DR eggNOG; COG1199; LUCA. DR HOGENOM; HOG000183657; -. DR OMA; DYNYYFD; -. DR OrthoDB; EOG61P6NQ; -. DR BioCyc; AORE350688:GHBG-2417-MONOMER; -. DR Proteomes; UP000000269; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF00270; DEAD; 1. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 3. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW Complete proteome {ECO:0000313|Proteomes:UP000000269}; KW Reference proteome {ECO:0000313|Proteomes:UP000000269}. FT DOMAIN 191 451 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 800 AA; 94078 MW; 50CC79AF223B408B CRC64; MERKELISLE EYKEVVISIR SLVEFVLMSG DLDSRFTGSS RALEGTRAHQ KVQRSYKEGY TPEVSLKYCF PYKKYQMTVQ GRADGILIEE DRIIIDEIKS TTLPLDLLEE NRNLTHWGQA KCYGYIYARE HQLQNIDIQL TYYHLDTEEI KKFRKTWTFE ELERFFNELI EAYYNWVDTL EHWKRARNIS IKELQFPFSN YRKGQRELAV AVYRTIKEEK KLFAQAPTGI GKTISTLFPT VKAIGEGITS KVFYLTAKTI TRQVAEEAFS RMKSMGLRFK TVTLTAKDKI CFEKGKQCNP EECSFAKGHF DRVKSGLADL FQNEDSFTRE IIEFYAQRHQ ICPFEFSLDI AIWADGVICD YNYVFDPRVY LKRFFADEKG DYTFLIDEAH NLVDRSRGMF SAEINKKIFL EQKRVMKHQS QKVYKTLDKL NAFMIEARKK CGEHSFYIQK EENTEIYHLL ASFVRETDEL FKEGYQMDEN KDLLELYFNA FAFLKIAEFY DERYRTYIEK RQGDVFFKIF CLDPSYLLGE AIKRGRTAIF FSATLTPLPY FKEILGGAEE DYAIRLGSPF ESENLGLMVA DYISTKYRNR DRSYIHIADV IAKVSEGKTG NYFVFFPSYQ YMRRVLDVFV EEYPHINVLQ QQQTMTEEER EEFLNKFEDQ PERTSIAFGV LGGIFSEGVD LVGERLIGVI IIGVGLPQLS LEVNLIMEYF NQKNNKGYEY AYMFPGMNKV LQGAGRVIRT ETDRGIVCLV DDRFTSYGYQ ALFPPEWKHF RKVKDKKQIE TYLKEFWHNS SDNTDQREEI // ID A8MX75_HUMAN Unreviewed; 706 AA. AC A8MX75; DT 04-DEC-2007, integrated into UniProtKB/TrEMBL. DT 09-JAN-2013, sequence version 2. DT 11-MAY-2016, entry version 67. DE SubName: Full=TFIIH basal transcription factor complex helicase XPD subunit {ECO:0000313|Ensembl:ENSP00000375805}; DE Flags: Fragment; GN Name=ERCC2 {ECO:0000313|Ensembl:ENSP00000375805}; OS Homo sapiens (Human). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; OC Catarrhini; Hominidae; Homo. OX NCBI_TaxID=9606 {ECO:0000313|Ensembl:ENSP00000375805, ECO:0000313|Proteomes:UP000005640}; RN [1] {ECO:0000313|Ensembl:ENSP00000375805, ECO:0000313|Proteomes:UP000005640} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RX PubMed=15057824; DOI=10.1038/nature02399; RA Grimwood J., Gordon L.A., Olsen A.S., Terry A., Schmutz J., RA Lamerdin J.E., Hellsten U., Goodstein D., Couronne O., Tran-Gyamfi M., RA Aerts A., Altherr M., Ashworth L., Bajorek E., Black S., Branscomb E., RA Caenepeel S., Carrano A.V., Caoile C., Chan Y.M., Christensen M., RA Cleland C.A., Copeland A., Dalin E., Dehal P., Denys M., Detter J.C., RA Escobar J., Flowers D., Fotopulos D., Garcia C., Georgescu A.M., RA Glavina T., Gomez M., Gonzales E., Groza M., Hammon N., Hawkins T., RA Haydu L., Ho I., Huang W., Israni S., Jett J., Kadner K., Kimball H., RA Kobayashi A., Larionov V., Leem S.-H., Lopez F., Lou Y., Lowry S., RA Malfatti S., Martinez D., McCready P.M., Medina C., Morgan J., RA Nelson K., Nolan M., Ovcharenko I., Pitluck S., Pollard M., RA Popkie A.P., Predki P., Quan G., Ramirez L., Rash S., Retterer J., RA Rodriguez A., Rogers S., Salamov A., Salazar A., She X., Smith D., RA Slezak T., Solovyev V., Thayer N., Tice H., Tsai M., Ustaszewska A., RA Vo N., Wagner M., Wheeler J., Wu K., Xie G., Yang J., Dubchak I., RA Furey T.S., DeJong P., Dickson M., Gordon D., Eichler E.E., RA Pennacchio L.A., Richardson P., Stubbs L., Rokhsar D.S., Myers R.M., RA Rubin E.M., Lucas S.M.; RT "The DNA sequence and biology of human chromosome 19."; RL Nature 428:529-535(2004). RN [2] {ECO:0000213|PubMed:21269460} RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. RX PubMed=21269460; DOI=10.1186/1752-0509-5-17; RA Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P., RA Burckstummer T., Bennett K.L., Superti-Furga G., Colinge J.; RT "Initial characterization of the human central proteome."; RL BMC Syst. Biol. 5:17-17(2011). RN [3] {ECO:0000313|Ensembl:ENSP00000375805} RP IDENTIFICATION. RG Ensembl; RL Submitted (JUL-2011) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an Ensembl CC automatic analysis pipeline and should be considered as CC preliminary data. {ECO:0000313|Ensembl:ENSP00000375805}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; L47234; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR ProteinModelPortal; A8MX75; -. DR STRING; 9606.ENSP00000375809; -. DR EPD; A8MX75; -. DR PaxDb; A8MX75; -. DR Ensembl; ENST00000391941; ENSP00000375805; ENSG00000104884. DR UCSC; uc002pbk.3; human. DR HGNC; HGNC:3434; ERCC2. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR GeneTree; ENSGT00550000075092; -. DR HOGENOM; HOG000205390; -. DR HOVERGEN; HBG051498; -. DR ChiTaRS; ERCC2; human. DR NextBio; 35464999; -. DR Proteomes; UP000005640; Chromosome 19. DR ExpressionAtlas; A8MX75; baseline and differential. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 1: Evidence at protein level; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000005640}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Proteomics identification {ECO:0000213|EPD:A8MX75, KW ECO:0000213|MaxQB:A8MX75, ECO:0000213|PeptideAtlas:A8MX75}; KW Reference proteome {ECO:0000313|Proteomes:UP000005640}. FT DOMAIN 1 259 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 53 76 {ECO:0000256|SAM:Coils}. FT NON_TER 706 706 {ECO:0000313|Ensembl:ENSP00000375805}. SQ SEQUENCE 706 AA; 80512 MW; 75509B999489FBAE CRC64; MRELKRTLDA KGHGVLEMPS GTGKTVSLLA LIMAYQRAYP LEVTKLIYCS RTVPEIEKVI EELRKLLNFY EKQEGEKLPF LGLALSSRKN LCIHPEVTPL RFGKDVDGKC HSLTASYVRA QYQHDTSLPH CRFYEEFDAH GREVPLPAGI YNLDDLKALG RRQGWCPYFL ARYSILHANV VVYSYHYLLD PKIADLVSKE LARKAVVVFD EAHNIDNVCI DSMSVNLTRR TLDRCQGNLE TLQKTVLRIK ETDEQRLRDE YRRLVEGLRE ASAARETDAH LANPVLPDEV LQEAVPGSIR TAEHFLGFLR RLLEYVKWRL RVQHVVQESP PAFLSGLAQR VCIQRKPLRF CAERLRSLLH TLEITDLADF SPLTLLANFA TLVSTYAKGF TIIIEPFDDR TPTIANPILH FSCMDASLAI KPVFERFQSV IITSGTLSPL DIYPKILDFH PVTMATFTMT LARVCLCPMI IGRGNDQVAI SSKFETREDI AVIRNYGNLL LEMSAVVPDG IVAFFTSYQY MESTVASWYE QGILENIQRN KLLFIETQDG AETSVALEKY QEACENGRGA ILLSVARGKV SEGIDFVHHY GRAVIMFGVP YVYTQSRILK ARLEYLRDQF QIRENDFLTF DAMRHAAQCV GRAIRGKTDY GLMVFADKRF ARGDKRGKLP RWIQEHLTDA NLNLTVDEGV QVAKYFLRQM AQPFHR // ID A8NFF8_COPC7 Unreviewed; 789 AA. AC A8NFF8; DT 15-JAN-2008, integrated into UniProtKB/TrEMBL. DT 15-JAN-2008, sequence version 1. DT 11-MAY-2016, entry version 44. DE SubName: Full=Transcription factor TFIIH complex subunit Rad15 {ECO:0000313|EMBL:EAU88545.1}; GN ORFNames=CC1G_04251 {ECO:0000313|EMBL:EAU88545.1}; OS Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC OS 9003) (Inky cap fungus) (Hormographiella aspergillata). OC Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; OC Agaricomycetes; Agaricomycetidae; Agaricales; Psathyrellaceae; OC Coprinopsis. OX NCBI_TaxID=240176 {ECO:0000313|EMBL:EAU88545.1, ECO:0000313|Proteomes:UP000001861}; RN [1] {ECO:0000313|EMBL:EAU88545.1, ECO:0000313|Proteomes:UP000001861} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003 RC {ECO:0000313|Proteomes:UP000001861}; RX PubMed=20547848; DOI=10.1073/pnas.1003391107; RA Stajich J.E., Wilke S.K., Ahren D., Au C.H., Birren B.W., RA Borodovsky M., Burns C., Canback B., Casselton L.A., Cheng C.K., RA Deng J., Dietrich F.S., Fargo D.C., Farman M.L., Gathman A.C., RA Goldberg J., Guigo R., Hoegger P.J., Hooker J.B., Huggins A., RA James T.Y., Kamada T., Kilaru S., Kodira C., Kues U., Kupfer D., RA Kwan H.S., Lomsadze A., Li W., Lilly W.W., Ma L.J., Mackey A.J., RA Manning G., Martin F., Muraguchi H., Natvig D.O., Palmerini H., RA Ramesh M.A., Rehmeyer C.J., Roe B.A., Shenoy N., Stanke M., RA Ter-Hovhannisyan V., Tunlid A., Velagapudi R., Vision T.J., Zeng Q., RA Zolan M.E., Pukkila P.J.; RT "Insights into evolution of multicellular fungi from the assembled RT chromosomes of the mushroom Coprinopsis cinerea (Coprinus cinereus)."; RL Proc. Natl. Acad. Sci. U.S.A. 107:11889-11894(2010). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:EAU88545.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AACS02000002; EAU88545.1; -; Genomic_DNA. DR RefSeq; XP_001833272.1; XM_001833220.2. DR STRING; 240176.XP_001833272.1; -. DR EnsemblFungi; EAU88545; EAU88545; CC1G_04251. DR GeneID; 6009768; -. DR KEGG; cci:CC1G_04251; -. DR EuPathDB; FungiDB:CC1G_04251; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; A8NFF8; -. DR KO; K10844; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000001861; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000001861}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000001861}. FT DOMAIN 7 291 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 789 AA; 89845 MW; D8935E704E723A8D CRC64; MKFYIDNLPI IFPYDRIYPE QYAYMCDLKR TLDATGHCVL EMPSGTGKTV SLLSLIVSYQ QFFPTRRKLV YCSRTVPEIE KALTELKRLM KYRIDYAETE EEKEKERNFM GLGLTSRKNL CINPDVAREK KGTVVDARCR DLTNTAVCEK NRENPGSVPV CDWHENLGKM EPGTLIPQGI WTLEGVLEYA RQKVICPYFA VRRMMGFADI VIYSYHYLLD PKVAEQVSKD ISKDAIVVFD EAHNIDNVCI ESLSIDLTRP MLDSAARSVT KLSEKIDEIK TTDAAKLQNE YAKLVEGLQE AEESDTDGIM GNPVLPDDLL HEAIPGNIRK AEHFVAFLKR FVEYLKTRMR VTHVVAETPL SFLQHLKDIT YIERRPLRFC AERLQSLVRT LELNRLDEYS SLQKVASFAT LVATYEKGFL LILEPYETDT STVANPIFHL TCLDPSLAIK PVFERFSSVV ITSGTISPLD MYPKMLQFTP VVQETYPMTL TRNAFLPLVI TRGSDQVAIS SRFEVRNDPA VVRNFGSILV EYSKIVPDGV VAFFPSYLYM ESIVAAWNDM GILNEVWKHK LIFVETPDAN ETSIALENYR RACDNGRGAV LLSVARGKVS EGIDFDHNYG RAVIMFGVPY QYTESRILKA RLEYLRDAYR IRESEFLGFD AMRTAAQCVG RVLRGKTDWG LMIFADKRFA RSDKRSKLPR WINQCITETA SNLSTDMALT LSKLFMRTIS QNPNENQTGV SLWTLEDVEK AQAKQKALEL EAQQRTVDDD DEYGDGGLSD SALMEMDLN // ID A8PT04_MALGO Unreviewed; 837 AA. AC A8PT04; DT 15-JAN-2008, integrated into UniProtKB/TrEMBL. DT 15-JAN-2008, sequence version 1. DT 11-MAY-2016, entry version 51. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EDP45357.1}; GN ORFNames=MGL_0346 {ECO:0000313|EMBL:EDP45357.1}; OS Malassezia globosa (strain ATCC MYA-4612 / CBS 7966) OS (Dandruff-associated fungus). OC Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; OC Malasseziomycetes; Malasseziales; Malasseziaceae; Malassezia. OX NCBI_TaxID=425265 {ECO:0000313|EMBL:EDP45357.1, ECO:0000313|Proteomes:UP000008837}; RN [1] {ECO:0000313|EMBL:EDP45357.1, ECO:0000313|Proteomes:UP000008837} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC MYA-4612 / CBS 7966 {ECO:0000313|Proteomes:UP000008837}; RX PubMed=18000048; DOI=10.1073/pnas.0706756104; RA Xu J., Saunders C.W., Hu P., Grant R.A., Boekhout T., Kuramae E.E., RA Kronstad J.W., Deangelis Y.M., Reeder N.L., Johnstone K.R., Leland M., RA Fieno A.M., Begley W.M., Sun Y., Lacey M.P., Chaudhary T., Keough T., RA Chu L., Sears R., Yuan B., Dawson T.L.Jr.; RT "Dandruff-associated Malassezia genomes reveal convergent and RT divergent virulence traits shared with plant and human fungal RT pathogens."; RL Proc. Natl. Acad. Sci. U.S.A. 104:18730-18735(2007). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:EDP45357.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AAYY01000001; EDP45357.1; -; Genomic_DNA. DR RefSeq; XP_001732571.1; XM_001732519.1. DR STRING; 425265.XP_001732571.1; -. DR GeneID; 5856877; -. DR KEGG; mgl:MGL_0346; -. DR EuPathDB; FungiDB:MGL_0346; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; A8PT04; -. DR KO; K10844; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000008837; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000008837}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000008837}. FT DOMAIN 7 304 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 837 AA; 95784 MW; 27CE820383F811A7 CRC64; MKFYIDDLPV LFPYPKIYPE QYSYMVDLKR TLDVKGHGVL EMPSGTGKTV SLLSLIISYQ RFYPGSRKLV YCSRTVSEIE KALAELKRLM AYRAKYNTKK QLSDGIEPMD VDSEDIQGQM EDILALGLSS RKNMCVHPTV SQERKGKVVD ARCRDMTSAW ACEKGRQDPG SVELCDFHEE LGKLEPGHLV PPGVWTIEEL IEYSKDKGIC PYFAVRRMMP FCDIIIYSFH YLLDPKVAEQ VSKEISKDAI VVFDEAHNID NVCIESLSID LTRPILDNAY RCVNQLADKV DEVKKVDSAR LQDEYVRLVE GLQQQSDDRE AESFMANPVL PDDLLQEAIP GNIRRAEHFV AFLRRFVEYL KTRMRVLHVV AETPASFLQH LKEITFIERK PLRFCAERLR MLVQTLELTR LDEYSALQTV AFFATLVSTY DKGFLLILEP FETEQATVPN PIFHFTCLDA SLAIAPVFER FSSVIITSGT ISPLDMYPKM LRFDTVVQES YTMTLTRQCF LPLVITRGSD QVAISSRFEV RNDPSVVRNY GNILIEYSRC IPDGIVAFFP SYLYMESIVA AWHDMGILDE VWRHKLVFIE TPDAPETSIA LENYRRACDN GRGAILLSVA RGKVSEGIDF DHNYGRAVIM FGVPYQYTES RILKARLEFL RDNFRIKEND FLTFDAMRHA AQCVGRVLRG KSDYGLMIFA DKRFARSDKR AKLPKWIAQY IEPVFSNLST DMAIVESKRF MRTMGQPYPA GKNGISLWDL EDIERRQQKE RDAFERLLQQ DSDDWVAKHQ HEVRMTSDQD YDGSIPAANA AASVHELADD FDAEFGTGAE LTQVSVP // ID A8XML3_CAEBR Unreviewed; 755 AA. AC A8XML3; DT 15-JAN-2008, integrated into UniProtKB/TrEMBL. DT 15-JAN-2008, sequence version 1. DT 11-MAY-2016, entry version 68. DE SubName: Full=Protein CBG15713 {ECO:0000313|EMBL:CAP33889.1}; GN Name=xpd-1 {ECO:0000313|WormBase:CBG15713}; GN ORFNames=CBG15713 {ECO:0000313|EMBL:CAP33889.1, GN ECO:0000313|WormBase:CBG15713}, GN CBG_15713 {ECO:0000313|EMBL:CAP33889.1}; OS Caenorhabditis briggsae. OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; OC Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. OX NCBI_TaxID=6238 {ECO:0000313|EMBL:CAP33889.1, ECO:0000313|Proteomes:UP000008549}; RN [1] {ECO:0000313|EMBL:CAP33889.1, ECO:0000313|Proteomes:UP000008549} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=AF16 {ECO:0000313|EMBL:CAP33889.1, RC ECO:0000313|Proteomes:UP000008549}; RX PubMed=14624247; DOI=10.1371/journal.pbio.0000045; RA Stein L.D., Bao Z., Blasiar D., Blumenthal T., Brent M.R., Chen N., RA Chinwalla A., Clarke L., Clee C., Coghlan A., Coulson A., RA D'Eustachio P., Fitch D.H., Fulton L.A., Fulton R.E., RA Griffiths-Jones S., Harris T.W., Hillier L.W., Kamath R., RA Kuwabara P.E., Mardis E.R., Marra M.A., Miner T.L., Minx P., RA Mullikin J.C., Plumb R.W., Rogers J., Schein J.E., Sohrmann M., RA Spieth J., Stajich J.E., Wei C., Willey D., Wilson R.K., Durbin R., RA Waterston R.H.; RT "The genome sequence of Caenorhabditis briggsae: a platform for RT comparative genomics."; RL PLoS Biol. 1:166-192(2003). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; HE600979; CAP33889.1; -; Genomic_DNA. DR RefSeq; XP_002640826.1; XM_002640780.1. DR ProteinModelPortal; A8XML3; -. DR STRING; 6238.CBG15713; -. DR EnsemblMetazoa; CBG15713; CBG15713; CBG15713. DR GeneID; 8582820; -. DR KEGG; cbr:CBG15713; -. DR CTD; 8582820; -. DR WormBase; CBG15713; CBP03819; WBGene00035859; Cbr-xpd-1. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR HOGENOM; HOG000205390; -. DR InParanoid; A8XML3; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG70W3CM; -. DR Proteomes; UP000008549; Chromosome III. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 2. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000008549}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000008549}. FT DOMAIN 7 281 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 247 274 {ECO:0000256|SAM:Coils}. FT COILED 276 303 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 755 AA; 86294 MW; 63C827DBEA31A1E3 CRC64; MQLDIDGLKV LFPYDYVYPE QVLYMKEVKK ALDANGHGLL EMPSGTGKTV SLLSLVLSYM ISYPDRLDKL VYCSRTIPEI EKCVEEMKVL YDYWEKETGV PVAKITVAMS ARKNLCINEK VAALRFGNTV DSACQKLTSS SVRAKRQENS EIEGCDFFEN FEANGFPMQN GVWNLEDLRQ LGRERKICPY FTARNAINRA HIVVYSYHYI LDPKIAELVS KDFSRKSVVV FDEAHNIDNV CIESMSVAIS QKNADRALQE LQNLEQVVGR IKSANSEKLQ NEYDKLVEGL KRAERERAND ERLANPCIPD DILKEAVPGN IRQANHFLLF LKRFVEYVRH RLRTHQVLIE SPAAFMKDIQ ERMCIERRPM RFCAERLANL VRTLEITDNG DVWALSQVTT MCTLVSTYSK GFSVIVEPQD GSQMATITLS CHDASIAIRP VLHRHQSVII TSGTLSPLEM YPKILDFDPA VVASFTMTLA RPCLAPLVVA RGNDQVAMTS RFEQRADVAV IRNYGNLVLE MASLVPDGMV VFFTSYLYME NVIGVWYEQH IIDELMKYKL LFIETNDALE TSAALEKYVE ACDSGRGAVL FSVARGKVSE GIDFSHHLGR CVIMLGIPYM YTESRVLRAR LEYLRDSFGI RENDFLTFDA MRHTAQCMGR ALRSKTDYGL MVFADKRFSR QDKRGKLPRW MQEYLETAST NLSIDEAAQV ARRWLTLMAQ PFEKEHQLGV SLLNREMVQD GQTMRRFERV VEYVD // ID A9T079_PHYPA Unreviewed; 750 AA. AC A9T079; DT 05-FEB-2008, integrated into UniProtKB/TrEMBL. DT 05-FEB-2008, sequence version 1. DT 11-MAY-2016, entry version 58. DE SubName: Full=Predicted protein {ECO:0000313|EMBL:EDQ63090.1}; GN ORFNames=PHYPADRAFT_217649 {ECO:0000313|EMBL:EDQ63090.1}; OS Physcomitrella patens subsp. patens (Moss). OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Bryophyta; OC Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; OC Physcomitrella. OX NCBI_TaxID=3218 {ECO:0000313|Proteomes:UP000006727}; RN [1] {ECO:0000313|EMBL:EDQ63090.1, ECO:0000313|Proteomes:UP000006727} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=cv. Gransden 2004 {ECO:0000313|Proteomes:UP000006727}; RX PubMed=18079367; DOI=10.1126/science.1150646; RA Rensing S.A., Lang D., Zimmer A.D., Terry A., Salamov A., Shapiro H., RA Nishiyama T., Perroud P.-F., Lindquist E.A., Kamisugi Y., RA Tanahashi T., Sakakibara K., Fujita T., Oishi K., Shin-I T., RA Kuroki Y., Toyoda A., Suzuki Y., Hashimoto S.-I., Yamaguchi K., RA Sugano A., Kohara Y., Fujiyama A., Anterola A., Aoki S., Ashton N., RA Barbazuk W.B., Barker E., Bennetzen J.L., Blankenship R., Cho S.H., RA Dutcher S.K., Estelle M., Fawcett J.A., Gundlach H., Hanada K., RA Heyl A., Hicks K.A., Hughes J., Lohr M., Mayer K., Melkozernov A., RA Murata T., Nelson D.R., Pils B., Prigge M., Reiss B., Renner T., RA Rombauts S., Rushton P.J., Sanderfoot A., Schween G., Shiu S.-H., RA Stueber K., Theodoulou F.L., Tu H., Van de Peer Y., Verrier P.J., RA Waters E., Wood A., Yang L., Cove D., Cuming A.C., Hasebe M., RA Lucas S., Mishler B.D., Reski R., Grigoriev I.V., Quatrano R.S., RA Boore J.L.; RT "The Physcomitrella genome reveals evolutionary insights into the RT conquest of land by plants."; RL Science 319:64-69(2008). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; DS545034; EDQ63090.1; -; Genomic_DNA. DR RefSeq; XP_001772009.1; XM_001771957.1. DR UniGene; Ppa.1214; -. DR ProteinModelPortal; A9T079; -. DR STRING; 3218.PP1S145_26V6.1; -. DR EnsemblPlants; PP1S145_26V6.1; PP1S145_26V6.1; PP1S145_26V6. DR EnsemblPlants; PP1S145_26V6.2; PP1S145_26V6.2; PP1S145_26V6. DR EnsemblPlants; PP1S145_26V6.3; PP1S145_26V6.3; PP1S145_26V6. DR GeneID; 5935306; -. DR Gramene; PP1S145_26V6.1; PP1S145_26V6.1; PP1S145_26V6. DR Gramene; PP1S145_26V6.2; PP1S145_26V6.2; PP1S145_26V6. DR Gramene; PP1S145_26V6.3; PP1S145_26V6.3; PP1S145_26V6. DR KEGG; ppp:PHYPADRAFT_217649; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; A9T079; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR Proteomes; UP000006727; Partially assembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0000724; P:double-strand break repair via homologous recombination; IEA:EnsemblPlants. DR GO; GO:0010286; P:heat acclimation; IEA:EnsemblPlants. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR GO; GO:0045893; P:positive regulation of transcription, DNA-templated; IEA:EnsemblPlants. DR GO; GO:0043687; P:post-translational protein modification; IEA:EnsemblPlants. DR GO; GO:0006457; P:protein folding; IEA:EnsemblPlants. DR GO; GO:0009644; P:response to high light intensity; IEA:EnsemblPlants. DR GO; GO:0042542; P:response to hydrogen peroxide; IEA:EnsemblPlants. DR GO; GO:0010212; P:response to ionizing radiation; IEA:EnsemblPlants. DR GO; GO:0009411; P:response to UV; IEA:EnsemblPlants. DR GO; GO:0000394; P:RNA splicing, via endonucleolytic cleavage and ligation; IEA:EnsemblPlants. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:EnsemblPlants. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000006727}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000006727}. FT DOMAIN 7 284 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 750 AA; 85422 MW; 6128B9F041D79595 CRC64; MKFKIEGLTV YFPYEFIYPE QYDYMVDLKR TLDARGHCLL EMPTGTGKTI TLLSLITSYM LANPSVGKLI YCTRTVHEME KVLEELRKLQ AYQEKALGKA AKMLALGLSS RKNLCIHPQV SGEGSRESVD AGCRKLTASW VRSLALDNPN IELCPYYEGY EKGGADALLP SGVYTLHDLR GFGREKRWCP YFLARHMIQF ANVVVYNYQY LLDPKVAGII SKEMEKECVV VFDEAHNIDN VCIEALSVNI RQQTLDGATR NLSQVTQLIE KSKATDANRL RQEYSRLVEG LAQRGNLAGT DTWLANPALP QDILQEAVPG NIRRAEHFVA FLKRLVQYIK NRMITEKVES ESPVSFVTAL QNQAGIDQKS LKFCYDRLHS LLLTLEVTNT DEFMYIQTVC DFATLVGTYT RGFTIIIEPY DERMPNIPDP VLQLSCLDSS LAIKPVFEKF QSVVITSGTL SPIDLYPRLL NFHPVISNSY KMTLTRDCLC PMVLTRGSDQ LPVSTKFDMR SDPGVVRNYG RLLLEMVTAV PDGIVCFFVS YSYMDGIVNS WNEMGILQEV MQHKLVFIET QDVVETTLAL DNYRRACDCG RGAVFFSVAR GKVAEGIDFD RHYGRLVIMY GVPFQYTLSR ILRARLEYLR ETFQIKENDF LTFDAVRQAA QCVGRVIRSK ADYGMMIFAD KRYNRHDKRS KLPGWILSHL REAHLNLSTD MSVHIAREFL RRMAQPYDKT GKGLNATLLS QADLEKMEKK // ID A9VAM5_MONBE Unreviewed; 798 AA. AC A9VAM5; DT 05-FEB-2008, integrated into UniProtKB/TrEMBL. DT 05-FEB-2008, sequence version 1. DT 11-MAY-2016, entry version 50. DE SubName: Full=Predicted protein {ECO:0000313|EMBL:EDQ85349.1}; GN ORFNames=34274 {ECO:0000313|EMBL:EDQ85349.1}; OS Monosiga brevicollis (Choanoflagellate). OC Eukaryota; Choanoflagellida; Codonosigidae; Monosiga. OX NCBI_TaxID=81824 {ECO:0000313|Proteomes:UP000001357}; RN [1] {ECO:0000313|EMBL:EDQ85349.1, ECO:0000313|Proteomes:UP000001357} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=MX1 / ATCC 50154 {ECO:0000313|Proteomes:UP000001357}; RX PubMed=18273011; DOI=10.1038/nature06617; RG JGI Sequencing; RA King N., Westbrook M.J., Young S.L., Kuo A., Abedin M., Chapman J., RA Fairclough S., Hellsten U., Isogai Y., Letunic I., Marr M., Pincus D., RA Putnam N., Rokas A., Wright K.J., Zuzow R., Dirks W., Good M., RA Goodstein D., Lemons D., Li W., Lyons J.B., Morris A., Nichols S., RA Richter D.J., Salamov A., Bork P., Lim W.A., Manning G., Miller W.T., RA McGinnis W., Shapiro H., Tjian R., Grigoriev I.V., Rokhsar D.; RT "The genome of the choanoflagellate Monosiga brevicollis and the RT origin of metazoans."; RL Nature 451:783-788(2008). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CH991574; EDQ85349.1; -; Genomic_DNA. DR RefSeq; XP_001749760.1; XM_001749708.1. DR ProteinModelPortal; A9VAM5; -. DR STRING; 431895.XP_001749760.1; -. DR EnsemblProtists; EDQ85349; EDQ85349; MONBRDRAFT_34274. DR GeneID; 5895022; -. DR KEGG; mbr:MONBRDRAFT_34274; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; A9VAM5; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR Proteomes; UP000001357; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000001357}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000001357}. FT DOMAIN 27 303 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 267 301 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 798 AA; 90121 MW; 506645F306357D4B CRC64; MKYVCIAFLE ERRALICVAP PMFMIDDLQV FFPYDLIYPE QYEYMQEIKR ALDAKGHALL EMPSGTGKTV SLLSLIVSYQ LGYPGRLGKF IYCSRTVPEI EKVLGELKRV IAYMSKEMGR NLDYLGLGLS SRRNMCIHPD VSQERTGAIV DSRCRQLTAS FVREKTADGK SLCTYFNGFE AHGRDAPLPA GVYNLEDLKV FGEQRKFCPY FLARYAITHA NIVVYSYHYL LDPKIAELVS REMGRDSVVV FDEAHNIDNV CIESMSVTIQ QRHLDRATAN LRSLKNKVKE MKESNTEQLR HEYQNLVQGL RDNRANQATD SVMANPVLPH DVLEEAVPGN IRKAEHFVAF MDRFVEYLKT RLRVKQVLSE PPAAFLEHVF QSVCIEAKPL RFCSERLGSL LQTLELARID DYGPITLIAS FATLVSTYSK GFSLIIEPYD DRAPSVPDPV LRFTCMDASL AVKPVFDRFQ SVIITSGTLS PLDMYPKILN FRPVTMCSFD MTLSRTSLLP IVVTRSADQT PLSTRYEDRE QSAVKRGYGH LLLDICSAVP DGVVCFFVSY EYLESAVSTW IDQGIMTQIQ AKKLVFVETQ DGAETSQALD SFQKACANGR GAVLLSVARG KVSEGIDFDH HLGRAVVMMG IPYVYTQSRV LKARLEYLAD NFQIKEDGWQ CVGRAIRGKT DYGIMCFADQ RFSRTDKRSK IPKWIQKYLT DTHLNLSSEE AMVLIRRFQR EMAQPYENTP GLSLLTLEEL QKENRKYASA KTVFDLGMLE TGGHALGAPP EKRVKDAADS QAKAEADA // ID B0CSE7_LACBS Unreviewed; 759 AA. AC B0CSE7; DT 26-FEB-2008, integrated into UniProtKB/TrEMBL. DT 26-FEB-2008, sequence version 1. DT 11-MAY-2016, entry version 45. DE SubName: Full=Predicted protein {ECO:0000313|EMBL:EDR14295.1}; GN ORFNames=LACBIDRAFT_319363 {ECO:0000313|EMBL:EDR14295.1}; OS Laccaria bicolor (strain S238N-H82 / ATCC MYA-4686) (Bicoloured OS deceiver) (Laccaria laccata var. bicolor). OC Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; OC Agaricomycetes; Agaricomycetidae; Agaricales; Tricholomataceae; OC Laccaria. OX NCBI_TaxID=486041 {ECO:0000313|Proteomes:UP000001194}; RN [1] {ECO:0000313|EMBL:EDR14295.1, ECO:0000313|Proteomes:UP000001194} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=S238N-H82 / ATCC MYA-4686 {ECO:0000313|Proteomes:UP000001194}; RX PubMed=18322534; DOI=10.1038/nature06556; RA Martin F., Aerts A., Ahren D., Brun A., Danchin E.G.J., Duchaussoy F., RA Gibon J., Kohler A., Lindquist E., Pereda V., Salamov A., RA Shapiro H.J., Wuyts J., Blaudez D., Buee M., Brokstein P., RA Canbaeck B., Cohen D., Courty P.E., Coutinho P.M., Delaruelle C., RA Detter J.C., Deveau A., DiFazio S., Duplessis S., RA Fraissinet-Tachet L., Lucic E., Frey-Klett P., Fourrey C., RA Feussner I., Gay G., Grimwood J., Hoegger P.J., Jain P., Kilaru S., RA Labbe J., Lin Y.C., Legue V., Le Tacon F., Marmeisse R., Melayah D., RA Montanini B., Muratet M., Nehls U., Niculita-Hirzel H., RA Oudot-Le Secq M.P., Peter M., Quesneville H., Rajashekar B., Reich M., RA Rouhier N., Schmutz J., Yin T., Chalot M., Henrissat B., Kuees U., RA Lucas S., Van de Peer Y., Podila G.K., Polle A., Pukkila P.J., RA Richardson P.M., Rouze P., Sanders I.R., Stajich J.E., Tunlid A., RA Tuskan G., Grigoriev I.V.; RT "The genome of Laccaria bicolor provides insights into mycorrhizal RT symbiosis."; RL Nature 452:88-92(2008). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; DS547092; EDR14295.1; -; Genomic_DNA. DR RefSeq; XP_001874854.1; XM_001874819.1. DR ProteinModelPortal; B0CSE7; -. DR STRING; 486041.XP_001874854.1; -. DR EnsemblFungi; EDR14295; EDR14295; LACBIDRAFT_319363. DR GeneID; 6070909; -. DR KEGG; lbc:LACBIDRAFT_319363; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; B0CSE7; -. DR KO; K10844; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000001194; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000001194}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000001194}. FT DOMAIN 7 295 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 759 AA; 86327 MW; 151CA71D3A4DEDAF CRC64; MKFFIDNLPI IFPYDRIYPE QYAYMCDLKR TLDATGHCVL EMPSGTGKTV SLLSLIVSYQ QFYPTRRKLV YCSRTVPEIE KALAELKRLM AYRISHAETP EEKEKERSFM GMGLTSRKNL CIHPEISKEK KGRVVDARCR DLTNAAVCEK GRADPDSVEL CSWHEELGKL EPGNLIPQGI WTLADILEYG RDKGVCPYFA VRRMASMAFA DVIIYSFHYL LDPKVAEQVS KEMSKDAIVV FDEAHNIDNV CIESLSIDLT RPMLDSATRS VVKLGEKIEE QVIKITDAAK LQDEYAKLVE GLQEPGGEDG DAFMGNPLLP EDLLNEAVPG NIRKAEHFVA FLKRFVEYLK TRMRVLHVVA ETPLSFLQHL KDITYIERRP LRFCAERLQS LIRTLELNRL DEYASLQKVA SFATLVSTYE KGFLLILEPF ETDNATVPNP IFHFTCLDPS LAIKPVFERF SSVVITSGTL SPLDMYPKML QFTPVVQETY PMTLTRNAFL PLVITRGSDQ VAISSRFEVR NDPAVVRNFG SILIEYSKIV PDGIVAFFPS YLYMESIVAA WNDMGILNEV WKNKLIFVET PDANETSIAL ENYRRACDNG RGAVLLSVAR GKVSEGIDFD HNYGRAVIMF GVPYQYTESR ILKARLEYLR DAYRIRESEF LGFDAMRNAA QCVGRVLRGK TDWGLMIFAD KRFARADKRA KLPRWINQYI TETASNLSTD MALTLSKLFM RTISQNPNEN STGVSLWSLE DLPILRQPA // ID B0S2X2_FINM2 Unreviewed; 748 AA. AC B0S2X2; DT 08-APR-2008, integrated into UniProtKB/TrEMBL. DT 08-APR-2008, sequence version 1. DT 11-MAY-2016, entry version 51. DE SubName: Full=ATP dependent helicase {ECO:0000313|EMBL:BAG08712.1}; GN OrderedLocusNames=FMG_1294 {ECO:0000313|EMBL:BAG08712.1}; OS Finegoldia magna (strain ATCC 29328) (Peptostreptococcus magnus). OC Bacteria; Firmicutes; Tissierellia; Tissierellales; Peptoniphilaceae; OC Finegoldia. OX NCBI_TaxID=334413 {ECO:0000313|EMBL:BAG08712.1, ECO:0000313|Proteomes:UP000001319}; RN [1] {ECO:0000313|EMBL:BAG08712.1, ECO:0000313|Proteomes:UP000001319} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 29328 {ECO:0000313|EMBL:BAG08712.1, RC ECO:0000313|Proteomes:UP000001319}; RX PubMed=18263572; DOI=10.1093/dnares/dsm030; RA Goto T., Yamashita A., Hirakawa H., Matsutani M., Todo K., Ohshima K., RA Toh H., Miyamoto K., Kuhara S., Hattori M., Shimizu T., Akimoto S.; RT "Complete genome sequence of Finegoldia magna, an anaerobic RT opportunistic pathogen."; RL DNA Res. 15:39-47(2008). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AP008971; BAG08712.1; -; Genomic_DNA. DR RefSeq; WP_012290965.1; NC_010376.1. DR ProteinModelPortal; B0S2X2; -. DR STRING; 334413.FMG_1294; -. DR EnsemblBacteria; BAG08712; BAG08712; FMG_1294. DR KEGG; fma:FMG_1294; -. DR PATRIC; 21888283; VBIFinMag33027_1502. DR eggNOG; ENOG4107QX6; Bacteria. DR eggNOG; COG1199; LUCA. DR HOGENOM; HOG000183657; -. DR OMA; DYNYYFD; -. DR OrthoDB; EOG61P6NQ; -. DR BioCyc; FMAG334413:GJ6M-1351-MONOMER; -. DR Proteomes; UP000001319; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000313|EMBL:BAG08712.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000001319}; KW Helicase {ECO:0000313|EMBL:BAG08712.1}; KW Hydrolase {ECO:0000313|EMBL:BAG08712.1}; KW Nucleotide-binding {ECO:0000313|EMBL:BAG08712.1}; KW Reference proteome {ECO:0000313|Proteomes:UP000001319}. FT DOMAIN 182 431 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 748 AA; 87201 MW; 475B2109696DA04E CRC64; MKKEIKLSVR DLVEYTERSG DIDDRFRNVF DRAKEGQKIH KMIQKEYDIG FLPEVTLKNT TLYKSVNYIV EGRADGIGIK NGKTLIDEIK STTRDLEELE YNSNKYHWAQ VKCYGYFYTL DNDLEDIDLQ LTYYQTDTKK IKFIRQNFTF EELKEFYFSL LEKYSVFTEL ITQHIKKRDE SIQNLSFPYP AFRAGQKYLS QNVYSATKQG VDLMVEAATG IGKTISTLFP SIKAMGEDLT DKIFYLTAKS TLKKACNDQL YLMKQKGLII KSVEIIAKNK VCINNEVKCN PNDCEFAKGH YDRVNKCILD MLENGDIIVE EIIKKYAFKY RVCPLELELD LSNFCDIVIC DYNYVFDPVV YLKRFFEVPY LRMSLLVDEA HNLVSRGRDM YSYSLSFNQL MDCCDELVDE KKELKIKRNL KKIAQQIKDE ALGKPVNTYE DLSVDLIDYC VRCKESMTKF LVEEKDKPYY DKVLDVYFEI NKFLKISDFY DDSFVTLIKS ENDDVIYNIM CLNTHNIFKN LLKKCKSNVF FSATLSPMTY FADVLGLEKF YNIRLESPFP KENLKVNHIN ISTRFKDRED TKYKIAEILR KINEKPGNKL IFFPSYSYLE SVYEICDFDI LTQERTLTDM ERLEFLSQFT TSSNIMAFCV LGGVFSEGVD LSGDRLNTVG IISVGLPGIS VENDLIKKYF DENGKNGFDY AYVYPGMNKV HQAGGRLIRT DTDTGELFLI DDRFDSYPYK SLLPNSWK // ID B0XHE1_CULQU Unreviewed; 542 AA. AC B0XHE1; DT 08-APR-2008, integrated into UniProtKB/TrEMBL. DT 08-APR-2008, sequence version 1. DT 13-APR-2016, entry version 43. DE SubName: Full=TFIIH basal transcription factor complex helicase subunit {ECO:0000313|EMBL:EDS28354.1}; GN ORFNames=CpipJ_CPIJ018703 {ECO:0000313|EMBL:EDS28354.1}; OS Culex quinquefasciatus (Southern house mosquito) (Culex pungens). OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; OC Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; OC Culicidae; Culicinae; Culicini; Culex; Culex. OX NCBI_TaxID=7176 {ECO:0000313|Proteomes:UP000002320}; RN [1] {ECO:0000313|Proteomes:UP000002320} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=JHB {ECO:0000313|Proteomes:UP000002320}; RG The Broad Institute Genome Sequencing Platform; RA Atkinson P.W., Hemingway J., Christensen B.M., Higgs S., Kodira C.D., RA Hannick L.I., Megy K., O'Leary S.B., Pearson M., Haas B.J., RA Mauceli E., Wortman J.R., Lee N.H., Guigo R., Stanke M., Alvarado L., RA Amedeo P., Antoine C.H., Arensburger P., Bidwell S.L., Crawford M., RA Camaro F., Devon K., Engels R., Hammond M., Howarth C., Koehrsen M., RA Lawson D., Montgomery P., Nene V., Nusbaum C., Puiu D., RA Romero-Severson J., Severson D.W., Shumway M., Sisk P., Stolte C., RA Zeng Q., Eisenstadt E., Fraser-Liggett C.M., Strausberg R., RA Galagan J., Birren B., Collins F.H.; RT "Annotation of Culex pipiens quinquefasciatus."; RL Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; DS233146; EDS28354.1; -; Genomic_DNA. DR RefSeq; XP_001869063.1; XM_001869028.1. DR ProteinModelPortal; B0XHE1; -. DR STRING; 7176.CPIJ018703-PA; -. DR EnsemblMetazoa; CPIJ018703-RA; CPIJ018703-PA; CPIJ018703. DR GeneID; 6052878; -. DR KEGG; cqu:CpipJ_CPIJ018703; -. DR VectorBase; CPIJ018703; Culex quinquefasciatus. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR HOGENOM; HOG000205390; -. DR InParanoid; B0XHE1; -. DR KO; K10844; -. DR OMA; CIGYLAK; -. DR OrthoDB; EOG70W3CM; -. DR PhylomeDB; B0XHE1; -. DR Proteomes; UP000002320; Partially assembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:InterPro. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SUPFAM; SSF52540; SSF52540; 2. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000313|EMBL:EDS28354.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000002320}; KW Helicase {ECO:0000313|EMBL:EDS28354.1}; KW Hydrolase {ECO:0000313|EMBL:EDS28354.1}; KW Nucleotide-binding {ECO:0000313|EMBL:EDS28354.1}; KW Reference proteome {ECO:0000313|Proteomes:UP000002320}. FT DOMAIN 52 328 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 542 AA; 61484 MW; 0534C60B39AD896E CRC64; MFEEIVRCMK SGIAPGIDRI SAEMLKAITP SCQLGCCIGY LAKSGTTISV DGLLVYFPYE YIYPEQYAYM LELKRTFDAK GHCLLEMPSG TGKTTTLLSL IVAYIMENPH IVRKLIYCSR TVPEIEKVIA ELKHLMNYYE KQTGVMPNIT GLVLSSRKNM CIHSEVSKER DGKIVDAKCY GMTASYVRDR AATDDSVPIC QYFEGFQAEG KETTLPPGVY SIDDMKEFGR ERNWCPYFMS RFAINQAHVV VYSYHYLLDP KIAEVVSKEL ARESVVVCDE AHNIDNVCVD SMSVKINRRL IEKSTTGVHT LEKYVAEMKD DDRRRLNDEY LRLVQGLKDA AMQRETDMVL ANPALPSEIL KEVVPGNIRN ADHFLSFLKR FIEYIKSRLR VQHVVQESPA GFLKDIQQKV CIERKPLRFC AERLSSLLRT LEITDLTEFG PLTVITSFAT LVSSYTKGFT IIIEPFDDKT PTVSNPIMHL SCMDSSIAMK PIFQRFQSVV ITSGTLSPMD MYPKILDFEP VVMSSFTMTL ARPCLLPMIL VI // ID B1L5V5_KORCO Unreviewed; 602 AA. AC B1L5V5; DT 29-APR-2008, integrated into UniProtKB/TrEMBL. DT 29-APR-2008, sequence version 1. DT 11-MAY-2016, entry version 50. DE SubName: Full=Rad3-related DNA helicase {ECO:0000313|EMBL:ACB07834.1}; GN OrderedLocusNames=Kcr_1088 {ECO:0000313|EMBL:ACB07834.1}; OS Korarchaeum cryptofilum (strain OPF8). OC Archaea; Candidatus Korarchaeota; Candidatus Korarchaeum. OX NCBI_TaxID=374847 {ECO:0000313|EMBL:ACB07834.1, ECO:0000313|Proteomes:UP000001686}; RN [1] {ECO:0000313|EMBL:ACB07834.1, ECO:0000313|Proteomes:UP000001686} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=OPF8 {ECO:0000313|Proteomes:UP000001686}; RX PubMed=18535141; DOI=10.1073/pnas.0801980105; RA Elkins J.G., Podar M., Graham D.E., Makarova K.S., Wolf Y., Randau L., RA Hedlund B.P., Brochier-Armanet C., Kunin V., Anderson I., Lapidus A., RA Goltsman E., Barry K., Koonin E.V., Hugenholtz P., Kyrpides N., RA Wanner G., Richardson P., Keller M., Stetter K.O.; RT "A korarchaeal genome reveals new insights into the evolution of the RT Archaea."; RL Proc. Natl. Acad. Sci. U.S.A. 105:8102-8107(2008). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000968; ACB07834.1; -; Genomic_DNA. DR RefSeq; WP_012309731.1; NC_010482.1. DR ProteinModelPortal; B1L5V5; -. DR STRING; 374847.Kcr_1088; -. DR EnsemblBacteria; ACB07834; ACB07834; Kcr_1088. DR GeneID; 6094365; -. DR KEGG; kcr:Kcr_1088; -. DR eggNOG; arCOG00770; Archaea. DR eggNOG; COG1199; LUCA. DR HOGENOM; HOG000223366; -. DR InParanoid; B1L5V5; -. DR KO; K10844; -. DR OMA; MARIKIS; -. DR BioCyc; KCRY374847:GH12-1092-MONOMER; -. DR Proteomes; UP000001686; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000313|EMBL:ACB07834.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000001686}; KW Helicase {ECO:0000313|EMBL:ACB07834.1}; KW Hydrolase {ECO:0000313|EMBL:ACB07834.1}; KW Nucleotide-binding {ECO:0000313|EMBL:ACB07834.1}; KW Reference proteome {ECO:0000313|Proteomes:UP000001686}. FT DOMAIN 1 250 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 602 AA; 68924 MW; 79AE2A9FCF1C9EB0 CRC64; MEHFPYKPRE HQKEVMEAIR NAVRRGENFC LHAPTGFGKT PVVLSALLSE LNGGKIIWAV RTGNETDRPI EELKVINRKS EVFGFSFRGK KDMCLLARRM NISSYEGVSN LCRLRRESCP YFRNLKKLDY FQIDGPMVFS EILKAAESIQ VCPYFLQMML LEEASLISLS YNYILSPLGW AIRHKVSFKR SFLVVDEAHN IDRVAMELNS KSISLTSLER AIKEDERYDP KDSLGLRRKL TSMRDFMRRV AVGEDGTFDL NEMLSSTDLG PDDLKKFHEL VDIVYSDYVK RGKEPRSYLN SVAEFLIVAL EKAGEEGVAY LYSVEDEPSL EVWDMRVRSF LSTIWKDFRS VIFMSGTLEP IDAFSDVVGV DNFSRMSVPS IADPERVSTV IVRGVSTRGE ELSDEMLKRY LKVVERFLSI PGNLAIFTAS YRIQGEVISG IIELAREAGK LTYSEDRNMS GDEASRILRE FKDLPRQGRE GLLIAPAGGR FAEGADFPGE ELEGIMLLGI PFDRLTTKTR VMIEYYERIY GRRRGRYLSY VVPALRKASQ ALGRAVRSHE DEAIFLLADE RYLNRTYFSL LPDFVRWNVR VVNWRDLPSS DG // ID B2B235_PODAN Unreviewed; 802 AA. AC B2B235; DT 20-MAY-2008, integrated into UniProtKB/TrEMBL. DT 20-MAY-2008, sequence version 1. DT 11-MAY-2016, entry version 54. DE SubName: Full=Podospora anserina S mat+ genomic DNA chromosome 6, supercontig 2 {ECO:0000313|EMBL:CAP71170.1}; DE SubName: Full=Putative DNA repair helicase RAD3 {ECO:0000313|EMBL:CDP30571.1}; GN ORFNames=PODANS_6_5400 {ECO:0000313|EMBL:CAP71170.1}; OS Podospora anserina (strain S / ATCC MYA-4624 / DSM 980 / FGSC 10383) OS (Pleurage anserina). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; OC Sordariomycetes; Sordariomycetidae; Sordariales; Lasiosphaeriaceae; OC Podospora. OX NCBI_TaxID=515849 {ECO:0000313|EMBL:CAP71170.1}; RN [1] {ECO:0000313|EMBL:CAP71170.1, ECO:0000313|Proteomes:UP000001197} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=S / ATCC MYA-4624 / DSM 980 / FGSC 10383 RC {ECO:0000313|Proteomes:UP000001197}, and RC S mat+ {ECO:0000313|EMBL:CAP71170.1}; RX PubMed=18460219; DOI=10.1186/gb-2008-9-5-r77; RA Espagne E., Lespinet O., Malagnac F., Da Silva C., Jaillon O., RA Porcel B.M., Couloux A., Aury J.-M., Segurens B., Poulain J., RA Anthouard V., Grossetete S., Khalili H., Coppin E., RA Dequard-Chablat M., Picard M., Contamine V., Arnaise S., Bourdais A., RA Berteaux-Lecellier V., Gautheret D., de Vries R.P., Battaglia E., RA Coutinho P.M., Danchin E.G.J., Henrissat B., El Khoury R., RA Sainsard-Chanet A., Boivin A., Pinan-Lucarre B., Sellem C.H., RA Debuchy R., Wincker P., Weissenbach J., Silar P.; RT "The genome sequence of the model ascomycete fungus Podospora RT anserina."; RL Genome Biol. 9:R77.1-R77.22(2008). RN [2] {ECO:0000313|EMBL:CAP71170.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=S mat+ {ECO:0000313|EMBL:CAP71170.1}; RA Genoscope - CEA; RL Submitted (JUL-2008) to the EMBL/GenBank/DDBJ databases. RN [3] {ECO:0000313|Proteomes:UP000001197} RP GENOME REANNOTATION. RC STRAIN=S / ATCC MYA-4624 / DSM 980 / FGSC 10383 RC {ECO:0000313|Proteomes:UP000001197}; RX PubMed=24558260; DOI=10.1534/genetics.113.159988; RA Grognet P., Bidard F., Kuchly C., Tong L.C.H., Coppin E., RA Benkhali J.A., Couloux A., Wincker P., Debuchy R., Silar P.; RT "Maintaining two mating types: Structure of the mating type locus and RT its role in heterokaryosis in Podospora anserina."; RL Genetics 197:421-432(2014). RN [4] {ECO:0000313|EMBL:CDP30571.1} RP NUCLEOTIDE SEQUENCE. RA Genoscope - CEA; RL Submitted (APR-2014) to the EMBL/GenBank/DDBJ databases. RN [5] {ECO:0000313|EMBL:CDP30571.1} RP NUCLEOTIDE SEQUENCE. RA Grognet P., Bidard F., Kuchly C., Chan Ho Tong L., Coppin E., RA Ait Benkhali J., Couloux A., Wincker P., Debuchy R., Silar P.; RT "Maintaining two mating types: Structure of the mating type locus and RT its role in heterokaryosis in Podospora anserina."; RL Submitted (SEP-2014) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CU638744; CAP71170.1; -; Genomic_DNA. DR EMBL; FO904941; CDP30571.1; -; Genomic_DNA. DR RefSeq; XP_001910036.1; XM_001910001.1. DR STRING; 515849.XP_001910036.1; -. DR EnsemblFungi; CAP71170; CAP71170; PODANS_6_5400. DR GeneID; 6194720; -. DR KEGG; pan:PODANSg7073; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR KO; K10844; -. DR Proteomes; UP000001197; Chromosome 6. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CDP30571.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000001197}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:CDP30571.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CDP30571.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CDP30571.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000001197}. FT DOMAIN 7 283 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 738 776 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 802 AA; 92435 MW; 00EFC07F04CA6425 CRC64; MEFFIDDLRV LFPYPRIYPE QYAYMVDLKK TLDAGGNCVL EMPSGTGKTV TLLSLIVAYQ MSSQEKRPLI YCSRTMSEIE KALVELKALM KFRAERLGHE EDFRAMGLTS RKNLCLHPDV KREKSGSVVD ARCRSLTAGF IQEKKRKGED VDVCVYHDNL DNLEPHNLIP NGVWSLDGLL RYGQKHTQCP YFTARRMMSQ CNVVIYSYHY LLDPKIAERV SKDFSKDCIV VFDEAHNIDN VCIESLSTDI TEESLRRATR GAQFLENRIN EMRDSDQQKL QDEYEKLVEG LRGDDETREE DSFMANPTLP EDLLKEAVPG NIRRAEHFVA FLRRFIEYLK TRMKVRQVIS ETPPSFLAHL KEYTFIEKKP LRFCAERLTS LVRTLELTRI EDYQPLQEVA TFATLVATYE KGFLLILEPY ESDTAEVPNP VLHFTCLDAA IAIKPVFDRF SSVIITSGTI SPLEMYPKML NFETVVQESY SMTLARRSFL PMIVTRGSDQ ATISTGFQVR NEPSVVRNYG SLLVEFAKIT PDGIVLFTPS YLYLESLISM WQGMGVLDEV WKYKLILVET PDAQETALAL ETYRTACKNG RGAVFLCVAR GKVSEGVDFD KEFGRTVINI GVPFQYTESR ILKARLEFLR ETYRIRENDF LSFDAMRHAA QCLGRVIRGK DDYGVMVLAD RRFKSKIQQL PKWIHQALLG ADTNLSTDMA VSNARRFFKM IAQPFRTEDQ EGISIWTLEQ LKQHQRKMQE ELIRELQATE EKRVNQQQQA QQAQQFISAR ERPDSDYEMD EDDEAELMAL DP // ID B2VS13_PYRTR Unreviewed; 772 AA. AC B2VS13; DT 01-JUL-2008, integrated into UniProtKB/TrEMBL. DT 01-JUL-2008, sequence version 1. DT 11-MAY-2016, entry version 46. DE SubName: Full=TFIIH basal transcription factor complex helicase subunit {ECO:0000313|EMBL:EDU39790.1}; GN ORFNames=PTRG_00352 {ECO:0000313|EMBL:EDU39790.1}; OS Pyrenophora tritici-repentis (strain Pt-1C-BFP) (Wheat tan spot OS fungus) (Drechslera tritici-repentis). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; OC Dothideomycetes; Pleosporomycetidae; Pleosporales; Pleosporineae; OC Pleosporaceae; Pyrenophora. OX NCBI_TaxID=426418 {ECO:0000313|EMBL:EDU39790.1, ECO:0000313|Proteomes:UP000001471}; RN [1] {ECO:0000313|Proteomes:UP000001471} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Pt-1C-BFP {ECO:0000313|Proteomes:UP000001471}; RX PubMed=23316438; DOI=10.1534/g3.112.004044; RA Manning V.A., Pandelova I., Dhillon B., Wilhelm L.J., Goodwin S.B., RA Berlin A.M., Figueroa M., Freitag M., Hane J.K., Henrissat B., RA Holman W.H., Kodira C.D., Martin J., Oliver R.P., Robbertse B., RA Schackwitz W., Schwartz D.C., Spatafora J.W., Turgeon B.G., RA Yandava C., Young S., Zhou S., Zeng Q., Grigoriev I.V., Ma L.-J., RA Ciuffetti L.M.; RT "Comparative genomics of a plant-pathogenic fungus, Pyrenophora RT tritici-repentis, reveals transduplication and the impact of repeat RT elements on pathogenicity and population divergence."; RL G3 (Bethesda) 3:41-63(2013). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; DS231615; EDU39790.1; -; Genomic_DNA. DR RefSeq; XP_001930685.1; XM_001930650.1. DR STRING; 426418.XP_001930685.1; -. DR EnsemblFungi; EDU39790; EDU39790; PTRG_00352. DR GeneID; 6340486; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; B2VS13; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000001471; Unassembled WGS sequence. DR GO; GO:0000439; C:core TFIIH complex; IEA:EnsemblFungi. DR GO; GO:0005829; C:cytosol; IEA:EnsemblFungi. DR GO; GO:0005675; C:holo TFIIH complex; IEA:EnsemblFungi. DR GO; GO:0000112; C:nucleotide-excision repair factor 3 complex; IEA:EnsemblFungi. DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:EnsemblFungi. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0043141; F:ATP-dependent 5'-3' DNA helicase activity; IEA:EnsemblFungi. DR GO; GO:0003684; F:damaged DNA binding; IEA:EnsemblFungi. DR GO; GO:0000717; P:nucleotide-excision repair, DNA duplex unwinding; IEA:EnsemblFungi. DR GO; GO:0033683; P:nucleotide-excision repair, DNA incision; IEA:EnsemblFungi. DR GO; GO:0070816; P:phosphorylation of RNA polymerase II C-terminal domain; IEA:EnsemblFungi. DR GO; GO:0045951; P:positive regulation of mitotic recombination; IEA:EnsemblFungi. DR GO; GO:0010525; P:regulation of transposition, RNA-mediated; IEA:EnsemblFungi. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:EnsemblFungi. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EDU39790.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000001471}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EDU39790.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EDU39790.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EDU39790.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000001471}. FT DOMAIN 1 271 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 772 AA; 87651 MW; 2390BD32DD878A70 CRC64; MCDLKRTLDQ GGHCVLEMPS GTGKTVSLLS LIVAYQQHYP EKRKLIYCSR TMSEIEKALA ELKALMKYRT TELGYEEDFR GLGLTSRKNL CLHPSVKREK SGTVVDARCR SLTAGFVKEK KERGEPVELC VYHENLDLLE PHNLIPPGVW TFDGMLKYGE QQKQCPYFTA RRMMPHCNVI IYSYHYLLDP KIADRVSKEL SKDCIVVFDE AHNIDNVCIE SLSIDLTEDV LRKATKGVNN LDRKITEMKS SDAEKLQNEY AKLVEGLRAA DEARNEDAFM ANPALPDDLL TEAVPGNIRR AEHFVAFLKR FIEYLKTRMK VLNVVADTPP EFLKHLRDLT FIERKPLRFC AERLTSLVRT LELTNIEDYQ PLQEVATFAT LVATYETGFL LIIEPFESAT ATVPNPVLHL TCLDAAIAIK PVFERFYSVI VTSGTMSPLD MYPRMLNFNT VVQESFTMTL TRKSFLPMIV DRGNDQNQVT SQFEHRNDLQ VQRNFGNLLI EFCKLTPDGV VVFFPSYLYM ESIISAWQGM EILDTVWKYK LILVETPDAQ ETALALETFR TACNNGRGAV LLCVARGKVS EGIDFDHHYG RTVICMGVPY QYTESRILKA RLEFLRETYR IKEADFLSFD AMRHAAQCLG RVIRGKDDYG IMVLADKRFN KKQTQLPKWI QQGLDAKSTK LSIDQAVGAA KNFLKDMSIP WSRAEQEGHS SWSLEDLEAH QRKKVAQGIS GTDNPAMRAL EGRAEIEHVE VEEVDEFGGS AAVDAVMAEV DA // ID B3L315_PLAKH Unreviewed; 1017 AA. AC B3L315; DT 02-SEP-2008, integrated into UniProtKB/TrEMBL. DT 02-SEP-2008, sequence version 1. DT 11-MAY-2016, entry version 54. DE SubName: Full=Dna excision-repair helicase, putative {ECO:0000313|EMBL:CAQ39391.1}; GN ORFNames=PKH_073220 {ECO:0000313|EMBL:CAQ39391.1}; OS Plasmodium knowlesi (strain H). OC Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; OC Plasmodiidae; Plasmodium; Plasmodium (Plasmodium). OX NCBI_TaxID=5851 {ECO:0000313|EMBL:CAQ39391.1, ECO:0000313|Proteomes:UP000031513}; RN [1] {ECO:0000313|EMBL:CAQ39391.1, ECO:0000313|Proteomes:UP000031513} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=H {ECO:0000313|EMBL:CAQ39391.1, RC ECO:0000313|Proteomes:UP000031513}; RA Pain A., Boehme U., Berry A.E., Mungall K., Finn R., Jackson A.P., RA Mourier T., Mistry J., Pasini E.M., Aslett M., Balasubrammaniam S., RA Borgwardt K., Brooks K., Carret C., Carver T.J., Cherevach I., RA Chillingworth T., Clarke T.G., Galinski M.R., Hall N., Harper D., RA Harris D., Hauser H., Ivens A., Janssen C.S., Keane T., Larke N., RA Lapp S., Marti M., Moule S., Meyer I.M., Ormond D., Peters N., RA Sanders M., Sanders S., Sergeant T.J., Simmonds M., Smith F., RA Squares R., Thurston S., Tivey A.R., Walker D., White B., RA Zuiderwijk E., Churcher C., Quail M.A., Cowman A.F., Turner C.M.R., RA Rajandream M.A., Kocken C.H.M., Thomas A.W., Newbold C.I., RA Barrell B.G., Berriman M.; RT "The genome of Plasmodium knowlesi strain H, a zoonotic malaria RT parasite with host range from monkey to man."; RL Nature 455:799-803(2008). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AM910989; CAQ39391.1; -; Genomic_DNA. DR RefSeq; XP_002258619.1; XM_002258583.1. DR EnsemblProtists; CAQ39391; CAQ39391; EBG00001282732. DR EnsemblProtists; PKH_073220; PKH_073220; PKH_073220. DR GeneID; 7320068; -. DR KEGG; pkn:PKH_073220; -. DR EuPathDB; PlasmoDB:PKNH_0732800; -. DR HOGENOM; HOG000205390; -. DR InParanoid; B3L315; -. DR KO; K10844; -. DR Proteomes; UP000031513; Chromosome 7. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR006935; Helicase/UvrB_N. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR Pfam; PF04851; ResIII; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 2. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CAQ39391.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000031513}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:CAQ39391.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CAQ39391.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CAQ39391.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000031513}. FT DOMAIN 8 414 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 392 424 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 1017 AA; 115151 MW; 87277456362D19C2 CRC64; MVVFHLDDLE VFFPYDYIYP EQYAYMRYLK KTLDSEGHCV LEMPTGTGKT VAIFSLITSY QYKKNDDGKF IFCTRTVAEM EKSLIELKKV IQYRVDTLRK RAQGSVEETG GGKVQVQSTA NTTTTQPTNN QHRTDNANNG NANANNGNAN ANNGNANANN GNANSGAPPG DILAIGISAR RCMCVNERVL EKHEREKIDE ECRKLTATFV REKKYINQKI NQMGTAHRDR DRISEFIVKN RQHIDIEDYF DIYNTRNSME EYSEIGLCGY YENYKKEFLF DFIEPGVYTI EDLKVICKGY KNEKNENIPM CPYFCAKKII EVAKVIVLNY QYIIDPKVSK SLFIGRDMNN RVNLYKKDII VFDEAHNIDS VCLEALSVNI DRNILNKATG NIKKLLEKIE TSKIMNEEKL REDCRRILQE LRAQGGEQAQ RGGGGKTYEG GGGKTGAEEG GKTGAEGGGK TGAEGQVYFD EDLNLIFPRV TNPLGVEDHP SSLGDTSLDE KKAKEDNLID GLAKLLGQSK RNLISTGKND ESVVSSLFSE DTKEALTNAP SNGVDDPTDL HYSPILMEDI VRNAVIPGHI RKSEHFLNLM RIVVMYLKKY VNIYEITSEG PLSFLYKCER ETKLDTSFFK FCFDRLKSIL NSLQIVNVDE YSALNIVCNF CTLLGSYFQG FIIICEPYPE ATGIYDPVIQ FACLDSSIAM KSVINKYKSV VLTSGTITPL ELYPKLLNFK TVLTASFPIS FDRNCVCPLI VTKSSDLVPL SSQFSLRSDI TVIKNYGMLL VEMCKTIPDG IVAYFPSYIY MEEVISSWYE LGIITSILEY KLIFIETKDI VSTTIALHNF KRACDLGKGA IFLSICRGKI AEGIDFDKHY GKCVILFGIP YQYTLSRILK ARLDFLKETY NIQENEFLTF DAMRQASQCV GRIIRNKKDY GIMIFADIRY ARNDKKSKLP PWIIKCMDIS NVNLTVSTAV NISRKFLLNM SQEYKETGQT KLSQDIICNQ PKCWSLVKSV LNMDDFI // ID B3MDT0_DROAN Unreviewed; 768 AA. AC B3MDT0; DT 02-SEP-2008, integrated into UniProtKB/TrEMBL. DT 20-JAN-2016, sequence version 2. DT 11-MAY-2016, entry version 54. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EDV36465.2}; DE EC=3.6.1.3 {ECO:0000313|EMBL:EDV36465.2}; GN Name=Dana\GF11940 {ECO:0000313|EMBL:EDV36465.2}; GN ORFNames=Dana_GF11940 {ECO:0000313|EMBL:EDV36465.2}, GN GF11940 {ECO:0000313|FlyBase:FBgn0088979}; OS Drosophila ananassae (Fruit fly). OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; OC Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; OC Ephydroidea; Drosophilidae; Drosophila; Sophophora. OX NCBI_TaxID=7217 {ECO:0000313|EMBL:EDV36465.2, ECO:0000313|Proteomes:UP000007801}; RN [1] {ECO:0000313|EMBL:EDV36465.2, ECO:0000313|Proteomes:UP000007801} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Tucson 14024-0371.13 {ECO:0000313|Proteomes:UP000007801}; RX PubMed=17994087; DOI=10.1038/nature06341; RG Drosophila 12 genomes consortium; RT "Evolution of genes and genomes on the Drosophila phylogeny."; RL Nature 450:203-218(2007). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CH902619; EDV36465.2; -; Genomic_DNA. DR RefSeq; XP_001959643.2; XM_001959607.2. DR STRING; 7217.FBpp0115132; -. DR EnsemblMetazoa; FBtr0116640; FBpp0115132; FBgn0088979. DR GeneID; 6494799; -. DR KEGG; dan:Dana_GF11940; -. DR FlyBase; FBgn0088979; Dana\GF11940. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; B3MDT0; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG70W3CM; -. DR Proteomes; UP000007801; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000007801}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000007801}. FT DOMAIN 7 285 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 768 AA; 87887 MW; 1F62D74B541B42FB CRC64; MKLSVDGLLV YFPYEYIYPE QYAYMLELKR SLDAKGHCLL EMPSGTGKTA TLLSLIVAYM VEYPETVRKL IYCSRTVPEI EKVIAELQNL MAYYERNCPN PPPFTGLVLS SRKNMCIHPE VSKEREGKAV DGKCYGLTAS YIRDRHEMDS ETPICQYYEG FTLEGKESTL PVGVYSIDDL KEYGRSRNWC PYFLARYAIA HAHIVVYSYH YLLDPKIAQV VSKEMTRESC VVFDEAHNID NVCIDSMSVK INRRTVERST NALNQLTKLV QDIREEDTNR LNEEYQRMVQ GLKDASVQRE TDMILANPVL PNDVLTEVVP GNIRNADHFL SFLRRFIEYI KTRLRVHHVV QESPAGFLKD ISSKICIERK PLRFCAERLS SLLRTLEISD MTEYGALTLI THFATLVSTY TKGFTIIIDL DDKTPTVSNP ILHFSCLDSS IAMAPVFSRF QTVVITSGTL SPMDMYPKIL DFDPVVMSSF TMTLARPCLL PMIVSKGNDQ VTISSKFETR EDTAVIRNYG QLLVEVAKTV PDGIVCFFTS YLYLESVVAS WYDQGIVDTL LRYKLLFIET QDNAETSYAL MNYVKACDCG RGAVLLAVAR GKVSEGVDFD HHYGRAVLMF GIPYVYTQSR ILKARLDYLR DQFQIRENDF LTFDAMRHAA QCVGRALRGK TDYGIMIFAD KRFSRQDKRS RLPKWIQEHL VDSFCNLSTE EAVQLARRWL RRMAQPFTRE DQLGISLLTL SQLENMEQEK LERQAQGKQG VGGEVQEL // ID B3RYU5_TRIAD Unreviewed; 720 AA. AC B3RYU5; DT 02-SEP-2008, integrated into UniProtKB/TrEMBL. DT 02-SEP-2008, sequence version 1. DT 11-MAY-2016, entry version 51. DE SubName: Full=Putative uncharacterized protein {ECO:0000313|EMBL:EDV23730.1}; GN ORFNames=TRIADDRAFT_50379 {ECO:0000313|EMBL:EDV23730.1}; OS Trichoplax adhaerens (Trichoplax reptans). OC Eukaryota; Metazoa; Placozoa; Trichoplax. OX NCBI_TaxID=10228 {ECO:0000313|Proteomes:UP000009022}; RN [1] {ECO:0000313|EMBL:EDV23730.1, ECO:0000313|Proteomes:UP000009022} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Grell-BS-1999 {ECO:0000313|EMBL:EDV23730.1, RC ECO:0000313|Proteomes:UP000009022}; RX PubMed=18719581; DOI=10.1038/nature07191; RA Srivastava M., Begovic E., Chapman J., Putnam N.H., Hellsten U., RA Kawashima T., Kuo A., Mitros T., Salamov A., Carpenter M.L., RA Signorovitch A.Y., Moreno M.A., Kamm K., Grimwood J., Schmutz J., RA Shapiro H., Grigoriev I.V., Buss L.W., Schierwater B., RA Dellaporta S.L., Rokhsar D.S.; RT "The Trichoplax genome and the nature of placozoans."; RL Nature 454:955-960(2008). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; DS985246; EDV23730.1; -; Genomic_DNA. DR RefSeq; XP_002113256.1; XM_002113220.1. DR STRING; 10228.TriadP50379; -. DR EnsemblMetazoa; TriadT50379; TriadP50379; TriadG50379. DR GeneID; 6754469; -. DR KEGG; tad:TRIADDRAFT_50379; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR HOGENOM; HOG000205390; -. DR InParanoid; B3RYU5; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG70W3CM; -. DR Proteomes; UP000009022; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 2. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000009022}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000009022}. FT DOMAIN 7 283 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 720 AA; 82133 MW; DA00E87BE494E2C0 CRC64; MKLNIDGLLV YFPYDYIYPE QYSYMCELKR ALDAKGHCAL EMPSGTGKTI SLLSLIIAYQ KVYPLHITKL IYCSRTVPEI EKALEEMKIL LEYYEKQTGE KQKFLGLGLS ARKNLCIHPE ISKERDGKVV DGRCLGLTAS YVRRNHQQDR SVEVCSFFEK FDTFGRDSVL PPGVYNLDDL KDFGAKQGWC PYFLARHSIL HANVVVYSYY YLLDPKIADL VSKEMSKQSV VVFDEAHNID NVCIESMTVK ISRKTIDRCQ TALDVMDKKV KKIKETDKKK LQEEYRRLVE GIYLIPDKTI ALLIVQHVVQ ETPMSFLHHI KETVCIDRKP LRFCSERLQS LMHTLEIINN SEFAALAAAA SFATLVSTYS KGFTLIIEPF DDRAPTIPDP VLHFSCMDAS IAIKPVFDRF QSVVITSGTL SPLDMYPKIL NFRPVSMSSY TMTLARPSLC PLIVTRGNDQ VTISSKFESR EDIAVMRNYG NLLAELTASV PDGVVCFFPS YTYMESVVSF WCDQGIMNNI IRNKLLFIET QDLAETVLAL ENYYKACENG RGAVLLSVAR GKVSEGIDFD HHYGRAVLMF GIPYVYTQSR KLRARLDYLR ENYQIRENDF LTFDAMRHAA QASCVGRAIR GKSDYGIMVF ADKRYSRLDK KGKLPKWIQE YLKDSVCDLT TDEAVQISKK FLRQMAAPFN KEDQLGLSLL TLEQLESREG QEAAKLAQRS // ID B4H4V2_DROPE Unreviewed; 769 AA. AC B4H4V2; DT 23-SEP-2008, integrated into UniProtKB/TrEMBL. DT 23-SEP-2008, sequence version 1. DT 11-MAY-2016, entry version 51. DE SubName: Full=GL10160 {ECO:0000313|EMBL:EDW32788.1}; GN Name=Dper\GL10160 {ECO:0000313|EMBL:EDW32788.1}; GN ORFNames=Dper_GL10160 {ECO:0000313|EMBL:EDW32788.1}, GN GL10160 {ECO:0000313|FlyBase:FBgn0147770}; OS Drosophila persimilis (Fruit fly). OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; OC Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; OC Ephydroidea; Drosophilidae; Drosophila; Sophophora. OX NCBI_TaxID=7234 {ECO:0000313|Proteomes:UP000008744}; RN [1] {ECO:0000313|EMBL:EDW32788.1, ECO:0000313|Proteomes:UP000008744} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=MSH-3 / Tucson 14011-0111.49 RC {ECO:0000313|Proteomes:UP000008744}; RX PubMed=17994087; DOI=10.1038/nature06341; RG Drosophila 12 genomes consortium; RT "Evolution of genes and genomes on the Drosophila phylogeny."; RL Nature 450:203-218(2007). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CH479210; EDW32788.1; -; Genomic_DNA. DR RefSeq; XP_002025881.1; XM_002025845.1. DR EnsemblMetazoa; FBtr0175775; FBpp0174267; FBgn0147770. DR GeneID; 6600814; -. DR KEGG; dpe:Dper_GL10160; -. DR FlyBase; FBgn0147770; Dper\GL10160. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG70W3CM; -. DR PhylomeDB; B4H4V2; -. DR Proteomes; UP000008744; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000008744}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000008744}. FT DOMAIN 7 285 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 769 AA; 87976 MW; 56411FF32D194B02 CRC64; MKISIDGLLV YFPYEYIYPE QYAYMLELKR TLDAKGHCLL EMPSGTGKTA TLLSLIVAYM IEHPETIRKL IYCSRTVPEI EKVIAELQNL MVYYERECVK PPAMTGLVLS SRKNLCIHPE VSKEREGKAV DGKCYGLTAS YIRDKHELDT DTPICQYFEG FSLEGKESTL PIGIYSLDDL KEYGRSRNWC PYFLARYAIS HAQIVVYSYH YLLDPKIAQV VSKEMTRESC VVFDEAHNID NVCIDSMSVK INRRTVERST NALNQLTKLV QDIREEDTNR LNEEYQRMVQ GLKDASVQRE TDMIMANPVL PNDVLTEVVP GNIRNADHFL SFLRRFIEFI KTRLRVHHVV QESPAGFLKD ISAKICIERK PLRFCAERLS SLLRTLEITD MTEYGALTLI THFATLVSTY TKGFTIIIEP FDDKTPTVSN PILHFSCLDS SIAMAPVFSR FQTVVITSGT LSPMDMYPKI LDFDPVVMSS FTMTLARPCL LPMIVSKGND QVTISSKFET REDTAVIRNY GQLLVEVAKT VPDGVVCFFT SYLYLESVVA SWYDQGIVDT LLRYKLLFIE TQDNAETSYA LMNYVKACDC GRGAVLLAVA RGKVSEGVDF DHHYGRAVLM FGIPYVYTQS RILKARLDYL RDQFQIREND FLTFDAMRHA AQCVGRALRG KTDYGIMIFA DKRFSRQDKR SRLPKWIQEH LVDSFCNLST EEAVQLARRW LRRMAQPFSR EDQLGISLLT LAQLENMEQE KLERQAQGKE GVGGQVQEL // ID B4I7L3_DROSE Unreviewed; 769 AA. AC B4I7L3; DT 23-SEP-2008, integrated into UniProtKB/TrEMBL. DT 23-SEP-2008, sequence version 1. DT 11-MAY-2016, entry version 51. DE SubName: Full=GM15813 {ECO:0000313|EMBL:EDW56588.1}; GN Name=Dsec\GM15813 {ECO:0000313|EMBL:EDW56588.1}; GN ORFNames=Dsec_GM15813 {ECO:0000313|EMBL:EDW56588.1}, GN GM15813 {ECO:0000313|FlyBase:FBgn0170729}; OS Drosophila sechellia (Fruit fly). OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; OC Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; OC Ephydroidea; Drosophilidae; Drosophila; Sophophora. OX NCBI_TaxID=7238 {ECO:0000313|Proteomes:UP000001292}; RN [1] {ECO:0000313|EMBL:EDW56588.1, ECO:0000313|Proteomes:UP000001292} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Rob3c / Tucson 14021-0248.25 RC {ECO:0000313|Proteomes:UP000001292}; RX PubMed=17994087; DOI=10.1038/nature06341; RG Drosophila 12 genomes consortium; RT "Evolution of genes and genomes on the Drosophila phylogeny."; RL Nature 450:203-218(2007). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CH480824; EDW56588.1; -; Genomic_DNA. DR RefSeq; XP_002039723.1; XM_002039687.1. DR EnsemblMetazoa; FBtr0198798; FBpp0197290; FBgn0170729. DR GeneID; 6615322; -. DR KEGG; dse:Dsec_GM15813; -. DR FlyBase; FBgn0170729; Dsec\GM15813. DR KO; K10844; -. DR OMA; LVVCNYH; -. DR OrthoDB; EOG70W3CM; -. DR PhylomeDB; B4I7L3; -. DR Proteomes; UP000001292; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000001292}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000001292}. FT DOMAIN 7 285 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 769 AA; 88008 MW; 3A6B269F909476E3 CRC64; MKLSVDGLLV YFPYEYIYPE QYAYMLELKR SLDAKGHCLL EMPSGTGKTA TLLSLIVAYM VEHPETVRKL IYCSRTVPEI EKVIAELQNL MVYYERHCPN PPPFTGLVLS SRKNMCIHPE VSKEREGKAV DGKCYGLTAS YIRERHDMDA ETPICQYFEG FSLEGKESTL PVGVYSIDDL KEYGRSRNWC PYFLARYAIA HAHIVVYSYH YLLDPKIAQV VSKEMSRESC VVFDEAHNID NVCIDSMSVK INRRTVERST NALNHLTKLV QDIREEDTNR LNEEYQRMVQ GLKDASVQRD TDMILANPVL PNDVLTEVVP GNIRNADHFL SFLRRFIEYI KTRLRVHHVV QESPAGFLKD ISSKICIERK PLRFCAERLS SLLRTLEIND LTEFGALTLI THFATLVSTY TKGFTIIIEP FDDKTPTVSN PILHFSCLDS SIAMAPVFSR FQTVVITSGT LSPMDMYPKI LDFDPVVMSS FTMTLTRPCL LPMIVSKGND QVTISSKFET REDTAVIRNY GQLLVEVAKT VPDGIVCFFT SYLYLESVVA SWYDQGIVDT LLRYKLLFIE TQDNAETSYA LMNYVKACDC GRGAVLLAVA RGKVSEGVDF DHHYGRAVLM FGIPYVYTQS RILKARLDYL RDQFQIREND FLTFDAMRHA AQCVGRALRG KTDYGIMIFA DKRFSRHDKR SRLPKWIQEH LVDSFCNLST EEAVQLARRW LRRMAQPFTR EDQLGISLLT LAQLENMEQE KLERQAQGKQ GVGGEVQEL // ID B4J6Q4_DROGR Unreviewed; 769 AA. AC B4J6Q4; DT 23-SEP-2008, integrated into UniProtKB/TrEMBL. DT 23-SEP-2008, sequence version 1. DT 11-MAY-2016, entry version 57. DE SubName: Full=GH20727 {ECO:0000313|EMBL:EDW00957.1}; GN Name=Dgri\GH20727 {ECO:0000313|EMBL:EDW00957.1}; GN ORFNames=Dgri_GH20727 {ECO:0000313|EMBL:EDW00957.1}, GN GH20727 {ECO:0000313|FlyBase:FBgn0128190}; OS Drosophila grimshawi (Fruit fly) (Idiomyia grimshawi). OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; OC Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; OC Ephydroidea; Drosophilidae; Drosophila; Hawaiian Drosophila. OX NCBI_TaxID=7222 {ECO:0000313|Proteomes:UP000001070}; RN [1] {ECO:0000313|EMBL:EDW00957.1, ECO:0000313|Proteomes:UP000001070} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Tucson 15287-2541.00 {ECO:0000313|Proteomes:UP000001070}; RX PubMed=17994087; DOI=10.1038/nature06341; RG Drosophila 12 genomes consortium; RT "Evolution of genes and genomes on the Drosophila phylogeny."; RL Nature 450:203-218(2007). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CH916367; EDW00957.1; -; Genomic_DNA. DR RefSeq; XP_001986090.1; XM_001986054.1. DR STRING; 7222.FBpp0154633; -. DR EnsemblMetazoa; FBtr0156141; FBpp0154633; FBgn0128190. DR GeneID; 6560968; -. DR KEGG; dgr:Dgri_GH20727; -. DR FlyBase; FBgn0128190; Dgri\GH20727. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; B4J6Q4; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG70W3CM; -. DR PhylomeDB; B4J6Q4; -. DR Proteomes; UP000001070; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000001070}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000001070}. FT DOMAIN 7 295 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 769 AA; 87880 MW; D5CD3F438EFAFE85 CRC64; MKLSVDGLLV YFPYEYIYPE QYAYMLELKR SLDAKGHCLL EMPSGTGKTA TLLSLIVAYM IEHPERIRKL IYCSRTVPEI EKVIAELQNL MVYYDKHAHT PPGMTGLVLS SRKNMCIHPE VSKEREGKAV DGKCYGLTAS YIRERHEMDA EVPICQYFEG FTLEGKESTL PVGIYSIDDL KEYGRSRNWC PYFTARYAIA HAHIVVYSYH YLLDPKIAQV VSKEMTRESC VVFDEAHNID NVCIDSMSVK INRRTVERST NALNNLTKLV QDMRDEDTNR LNEEYQRMVQ GLKDASVQRD TDMILANPVL PKDVLTEVVP GNIRNADHFL SFLRRFIEYI KTRLRVHHVV QESPAGFLKD VSSKICIERK PLRFCAERLS SLLRTLEISD MTEFGALTLI THFATLVSTY TKGFTIIIEP FDDKTPTVSN PIMHFSCLDS SIAMAPVFSR FQTVVITSGT LSPMDMYPKI LDFDPVVMSS FTMTLARPCL LPMIVSKGND QVSISSKFET REDTAVIRNY GQLLVEVAKT VPDGIVCFFT SYLYLESVVA SWYDQGIVDT LLRYKLLFIE TQDNAETSYA LMNYVKACDC GRGAVLLAVA RGKVSEGVDF DHHYGRAVLM FGIPYVYTQS RILKARLDYL RDQFQIREND FLTFDAMRHA AQCVGRALRG KTDYGIMIFA DKRFSRQDKR SRLPKWIQEH LVDSFCNLST EEAVQLARRW LRRMAQPFSR EVQLGISLLT LAQLEGMEQE KLERQAQGKQ GVGGEVQEL // ID B4KNC2_DROMO Unreviewed; 769 AA. AC B4KNC2; DT 23-SEP-2008, integrated into UniProtKB/TrEMBL. DT 20-JAN-2016, sequence version 2. DT 11-MAY-2016, entry version 50. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EDW09975.2}; DE EC=3.6.1.3 {ECO:0000313|EMBL:EDW09975.2}; GN Name=Dmoj\GI20811 {ECO:0000313|EMBL:EDW09975.2}; GN ORFNames=Dmoj_GI20811 {ECO:0000313|EMBL:EDW09975.2}, GN GI20811 {ECO:0000313|FlyBase:FBgn0143546}; OS Drosophila mojavensis (Fruit fly). OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; OC Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; OC Ephydroidea; Drosophilidae; Drosophila. OX NCBI_TaxID=7230 {ECO:0000313|EMBL:EDW09975.2, ECO:0000313|Proteomes:UP000009192}; RN [1] {ECO:0000313|EMBL:EDW09975.2, ECO:0000313|Proteomes:UP000009192} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Tucson 15081-1352.22 {ECO:0000313|Proteomes:UP000009192}; RX PubMed=17994087; DOI=10.1038/nature06341; RG Drosophila 12 genomes consortium; RT "Evolution of genes and genomes on the Drosophila phylogeny."; RL Nature 450:203-218(2007). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CH933808; EDW09975.2; -; Genomic_DNA. DR RefSeq; XP_002006040.2; XM_002006004.2. DR EnsemblMetazoa; FBtr0171536; FBpp0170028; FBgn0143546. DR GeneID; 6580180; -. DR KEGG; dmo:Dmoj_GI20811; -. DR FlyBase; FBgn0143546; Dmoj\GI20811. DR InParanoid; B4KNC2; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG70W3CM; -. DR Proteomes; UP000009192; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 2. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000009192}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000009192}. FT DOMAIN 7 285 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 769 AA; 87811 MW; 4D790DE33AD168C3 CRC64; MKLSVDGLLV YFPYEYIYPE QYAYMLELKR SLDAKGHCLL EMPSGTGKTA TLLSLVVAYM IEHPETVRKL IYCSRTVPEI EKVIAELQNL MAYYERNAPV APGFTGLVLS SRKNLCIHPE VSKEREGKAV DGKCYGLTAS YIRERHELDP EVPICQYFEG FTLEGKESTL PVGVYSIDDL KEYGRSRNWC PYFLARYAIA HAHIVVYSYH YLLDPKIAQV VSKEMTRESC VVFDEAHNID NVCIDSMSVK INRRTVERST NALNQLTKLV QEMREEDTNR LNEEYQRMVQ GLKDASVQRD TDMILANPVL PNDVLTEVVP GNIRNADHFL SFLRRFIEYI KTRLRVHHVV QESPAGFLKD VSSKICIERK PLRFCAERLS SLLRTLEITD MTEFGALTLI THFATLVSTY TKGFTIIIEP FDDKTPTVSN PIMHFSCLDS SIAMAPVFSR FQTVVITSGT LSPMDMYPKI LDFDPVVMSS FTMTLARPCL LPMIVSKGND QVAISSKFET REDTAVIRNY GQLLVEVAKT VPDGIVCFFT SYLYLESVVA SWYDQGIVDT LLRYKLLFIE TQDNAETSYA LMNYVKACDC GRGAVLLAVA RGKVSEGVDF DHHYGRAVLM FGIPYVYTQS RILKARLDYL RDQFQIREND FLTFDAMRHA AQCVGRALRG KTDYGIMIFA DKRFSRQDKR SRLPKWIQEH LVDSFCNLST EEAVQLARRW LRRMAQPFSR EDQLGISLLT LAQLETMEQE KLERQAQGKE GVGGEVQEL // ID B4LMQ6_DROVI Unreviewed; 769 AA. AC B4LMQ6; DT 23-SEP-2008, integrated into UniProtKB/TrEMBL. DT 23-SEP-2008, sequence version 1. DT 11-MAY-2016, entry version 58. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EDW60997.1}; DE EC=3.6.1.3 {ECO:0000313|EMBL:EDW60997.1}; GN Name=Dvir\GJ20544 {ECO:0000313|EMBL:EDW60997.1}; GN ORFNames=Dvir_GJ20544 {ECO:0000313|EMBL:EDW60997.1}, GN GJ20544 {ECO:0000313|FlyBase:FBgn0207684}; OS Drosophila virilis (Fruit fly). OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; OC Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; OC Ephydroidea; Drosophilidae; Drosophila. OX NCBI_TaxID=7244 {ECO:0000313|EMBL:EDW60997.1, ECO:0000313|Proteomes:UP000008792}; RN [1] {ECO:0000313|EMBL:EDW60997.1, ECO:0000313|Proteomes:UP000008792} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Tucson 15010-1051.87 {ECO:0000313|Proteomes:UP000008792}; RX PubMed=17994087; DOI=10.1038/nature06341; RG Drosophila 12 genomes consortium; RT "Evolution of genes and genomes on the Drosophila phylogeny."; RL Nature 450:203-218(2007). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CH940648; EDW60997.1; -; Genomic_DNA. DR RefSeq; XP_002049804.1; XM_002049768.2. DR STRING; 7244.FBpp0234961; -. DR EnsemblMetazoa; FBtr0236469; FBpp0234961; FBgn0207684. DR GeneID; 6626447; -. DR KEGG; dvi:Dvir_GJ20544; -. DR FlyBase; FBgn0207684; Dvir\GJ20544. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; B4LMQ6; -. DR KO; K10844; -. DR OMA; LVVCNYH; -. DR OrthoDB; EOG70W3CM; -. DR PhylomeDB; B4LMQ6; -. DR Proteomes; UP000008792; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000008792}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000008792}. FT DOMAIN 7 302 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 769 AA; 87810 MW; AF22F1A7C6704B52 CRC64; MKLSVDGLLV YFPYEYIYPE QYAYMLELKR SLDAKGHCLL EMPSGTGKTA TLLSLIVAYM IEHPETVRKL IYCSRTVPEI EKVIAELQNL MVYYDRHCPV PPGLTGLVLS SRKNMCIHPE VSKEREGKAV DGKCYGLTAS YIREHHELDA EVPICQYFEG FTLEGKESTL PVGIYSLDDL KEYGRSRNWC PYFLARYAIA HAHIVVYSYH YLLDPKIAQV VSKEMTREAC VVFDEAHNID NVCIDSMSVK INRRIVERST NALNQLTKLV QDMREEDTNR LNEEYQRMVQ GLKDASVQRD TDMILANPVL PSDVLKEVVP GNIRNADHFL SFLRRFVEYI KTRLRVHHVV QESPAGFLKD VSSKICIERK PLRFCAERLS SLLRTLEISD LTEYGALTLI THFATLVSTY TKGFTIIIEP FDDKTPTVSN PIMHFSCLDS SIAMAPVFSR FQTVVITSGT LSPMDMYPKI LDFDPVVMSS FTMTLARPCL LPMIVSKGND QVAISSKFET REDTAVIRNY GQLLVEVAKT VPDGIVCFFT SYLYLESVVA SWYDQGIVDT LLRYKLLFIE TQDNAETSYA LMNYVKACDC GRGAVLLAVA RGKVSEGVDF DHHYGRAVLM FGIPYVYTQS RILKARLDYL RDQFQIREND FLTFDAMRHA AQCVGRALRG KTDYGIMIFA DKRFSRQDKR SRLPKWIQEH LVDSFCNLST EEAVQLARRW LRRMAQPFSR EDQLGISLLT LAQLESMEQE KLERQAQGKQ GVGGEVQEL // ID B4MQM8_DROWI Unreviewed; 769 AA. AC B4MQM8; DT 23-SEP-2008, integrated into UniProtKB/TrEMBL. DT 23-SEP-2008, sequence version 1. DT 11-MAY-2016, entry version 56. DE SubName: Full=GK21904 {ECO:0000313|EMBL:EDW74417.1}; GN Name=Dwil\GK21904 {ECO:0000313|EMBL:EDW74417.1}; GN ORFNames=Dwil_GK21904 {ECO:0000313|EMBL:EDW74417.1}, GN GK21904 {ECO:0000313|FlyBase:FBgn0223889}; OS Drosophila willistoni (Fruit fly). OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; OC Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; OC Ephydroidea; Drosophilidae; Drosophila; Sophophora. OX NCBI_TaxID=7260 {ECO:0000313|Proteomes:UP000007798}; RN [1] {ECO:0000313|EMBL:EDW74417.1, ECO:0000313|Proteomes:UP000007798} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Tucson 14030-0811.24 {ECO:0000313|Proteomes:UP000007798}; RX PubMed=17994087; DOI=10.1038/nature06341; RG Drosophila 12 genomes consortium; RT "Evolution of genes and genomes on the Drosophila phylogeny."; RL Nature 450:203-218(2007). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CH963849; EDW74417.1; -; Genomic_DNA. DR RefSeq; XP_002063431.2; XM_002063395.2. DR STRING; 7260.FBpp0251047; -. DR EnsemblMetazoa; FBtr0252555; FBpp0251047; FBgn0223889. DR GeneID; 6640560; -. DR KEGG; dwi:Dwil_GK21904; -. DR FlyBase; FBgn0223889; Dwil\GK21904. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; B4MQM8; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG70W3CM; -. DR PhylomeDB; B4MQM8; -. DR Proteomes; UP000007798; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000007798}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000007798}. FT DOMAIN 7 285 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 769 AA; 87898 MW; 420EA8332FB35FB7 CRC64; MKLSVDGLLV YFPYEYIYPE QYAYMLELKR SLDAKGHCLL EMPSGTGKTA TLLSLIVAYM IEHPETIRKL IYCSRTVPEI EKVIAELQNL MVYYERHSDN PPAMTGLVLS SRKNMCIHPE VSKEREGKAV DGKCYGLTAS YVRDRHEMDA ETPICQYFEG FSLEGKEAAL PVGIYSIDDM KEFGRSRNWC PYFMARHAIA HAHIVVYSYH YLLDPKIAQV VSKEMSRESC VVFDEAHNID NVCIDSMSVK INRRTVERST NALNQLTKLV QEIREEDTNR LNEEYQRMVQ GLKDATVQRD TDMILANPVL PNDVLTEVVP GNIRNADHFL SFLRRFIEYI KTRLRVHHVV QESSAGFLKD ISSKICIERK PLRFCAERLS SLLRTLEITD LTEFGALTLI THFATLVSTY TKGFTIIIEP FDDKTPTVSN PILYFSCMDS SIAMAPVFSR FQTVVITSGT LSPMDMYPKI LDFDPVVMSS FTMTLARPCL LPMIVSKGND QVAISSKFET REDTAVIRNY GQLLVEVAKT VPDGVVCFFT SYLYLESVVA SWYDQGIVDT LLRYKLLFIE TQDNAETSYA LMNYVKACDC GRGAVLLAVA RGKVSEGVDF DHHYGRAVLM FGIPYVYTQS RILKARLDYL RDQFQIREND FLTFDAMRHA AQCVGRALRG KTDYGIMIFA DKRFSRQDKR SRLPKWIQEH LVDSFCNLST EEAVQLARRW LRRMAQPFTR EDQLGISLLT LAQLETMEHE KLERQAQGKE GVGGEVQEL // ID B4QFN4_DROSI Unreviewed; 769 AA. AC B4QFN4; DT 23-SEP-2008, integrated into UniProtKB/TrEMBL. DT 23-SEP-2008, sequence version 1. DT 11-MAY-2016, entry version 50. DE SubName: Full=GD11571 {ECO:0000313|EMBL:EDX08026.1}; DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KMY95458.1}; DE EC=3.6.1.3 {ECO:0000313|EMBL:KMY95458.1}; GN Name=Dsim\GD11571 {ECO:0000313|EMBL:EDX08026.1}; GN ORFNames=Dsim_GD11571 {ECO:0000313|EMBL:EDX08026.1}, GN Dsimw501_GD11571 {ECO:0000313|EMBL:KMY95458.1}, GN GD11571 {ECO:0000313|FlyBase:FBgn0183312}; OS Drosophila simulans (Fruit fly). OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; OC Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; OC Ephydroidea; Drosophilidae; Drosophila; Sophophora. OX NCBI_TaxID=7240 {ECO:0000313|EMBL:EDX08026.1, ECO:0000313|Proteomes:UP000000304}; RN [1] {ECO:0000313|EMBL:EDX08026.1, ECO:0000313|Proteomes:UP000000304} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Mixed {ECO:0000313|EMBL:EDX08026.1}; RX PubMed=17994087; DOI=10.1038/nature06341; RG Drosophila 12 genomes consortium; RT "Evolution of genes and genomes on the Drosophila phylogeny."; RL Nature 450:203-218(2007). RN [2] {ECO:0000313|EMBL:EDX08026.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=Mixed {ECO:0000313|EMBL:EDX08026.1}; RG FlyBase; RL Submitted (JUN-2008) to the EMBL/GenBank/DDBJ databases. RN [3] {ECO:0000313|EMBL:KMY95458.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=W501 {ECO:0000313|EMBL:KMY95458.1}; RX PubMed=22936249; DOI=10.1101/gr.141689.112; RA Hu T.T., Eisen M.B., Thornton K.R., Andolfatto P.; RT "A second-generation assembly of the Drosophila simulans genome RT provides new insights into patterns of lineage-specific divergence."; RL Genome Res. 23:89-98(2013). RN [4] {ECO:0000313|EMBL:KMY95458.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=W501 {ECO:0000313|EMBL:KMY95458.1}; RA Hu T., Eisen M.B., Thornton K.R., Andolfatto P.; RL Submitted (JUN-2014) to the EMBL/GenBank/DDBJ databases. RN [5] {ECO:0000313|EMBL:KMY95458.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=W501 {ECO:0000313|EMBL:KMY95458.1}; RG FlyBase; RL Submitted (APR-2015) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CM000362; EDX08026.1; -; Genomic_DNA. DR EMBL; CM002911; KMY95458.1; -; Genomic_DNA. DR RefSeq; XP_002082441.1; XM_002082405.1. DR EnsemblMetazoa; FBtr0211481; FBpp0209973; FBgn0183312. DR GeneID; 6735502; -. DR KEGG; dsi:Dsim_GD11571; -. DR FlyBase; FBgn0183312; Dsim\GD11571. DR KO; K10844; -. DR OMA; LVVCNYH; -. DR OrthoDB; EOG70W3CM; -. DR PhylomeDB; B4QFN4; -. DR Proteomes; UP000000304; Chromosome 2R. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000000304}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000000304}. FT DOMAIN 7 285 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 769 AA; 87951 MW; B89A7869F2D25B1A CRC64; MKLSVDGLLV YFPYEYIYPE QYAYMLELKR SLDAKGHCLL EMPSGTGKTA TLLSLIVAYM VEHPETVRKL IYCSRTVPEI EKVIAELQNL MVYYERHCPN PPPFTGLVLS SRKNMCIHPE VSKEREGKAV DGKCYGLTAS YIRERHDMDA ETPICQYFEG FSLEGKESTL PVGVYSIDDL KEYGRSRNWC PYFLARYAIA HAHIVVYSYH YLLDPKIAQV VSKEMSRESC VVFDEAHNID NVCIDSMSVK INRRTVERST NALNHLTKLV QDIREEDTNR LNEEYQRMVQ GLKDASVQRD TDMILANPVL PNDVLTEVVP GNIRNADHFL SFLRRFIEYI KTRLRVHHVV QESPAGFLKD ISSKICIERK PLRFCAERLS SLLRTLEISD LTEFGALTLI THFATLVSTY TKGFTIIIEP FDDKTPTVSN PILHFSCLDS SIAMAPVFSR FQTVVITSGT LSPMDMYPKI LDFDPVVMSS FTMTLARPCL LPMIVSKGND QVTISSKFET REDTAVIRNY GQLLVEVAKT VPDGIVCFFT SYLYLESVVA SWYDQGIVDT LLRYKLLFIE TQDNAETSYA LMNYVKACDC GRGAVLLAVA RGKVSEGVDF DHHYGRAVLM FGIPYVYTQS RILKARLDYL RDQFQIREND FLTFDAMRHA AQCVGRALRG KTDYGIMIFA DKRFSRHDKR SRLPKWIQEH LVDSFCNLST EEAVQLARRW LRRMAQPFTR EDQLGISLLT LAQLENMEQE KLERQAQGKQ GVGGEVQEL // ID B5E1L9_DROPS Unreviewed; 769 AA. AC B5E1L9; DT 14-OCT-2008, integrated into UniProtKB/TrEMBL. DT 14-OCT-2008, sequence version 1. DT 11-MAY-2016, entry version 50. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EDY69521.1}; DE EC=3.6.1.3 {ECO:0000313|EMBL:EDY69521.1}; GN Name=Dpse\GA25100 {ECO:0000313|EMBL:EDY69521.1}; GN ORFNames=Dpse_GA25100 {ECO:0000313|EMBL:EDY69521.1}, GN GA25100 {ECO:0000313|FlyBase:FBgn0246483}; OS Drosophila pseudoobscura pseudoobscura (Fruit fly). OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; OC Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; OC Ephydroidea; Drosophilidae; Drosophila; Sophophora. OX NCBI_TaxID=46245 {ECO:0000313|EMBL:EDY69521.1, ECO:0000313|Proteomes:UP000001819}; RN [1] {ECO:0000313|EMBL:EDY69521.1, ECO:0000313|Proteomes:UP000001819} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=MV2-25 / Tucson 14011-0121.94 RC {ECO:0000313|Proteomes:UP000001819}; RX PubMed=15632085; DOI=10.1101/gr.3059305; RA Richards S., Liu Y., Bettencourt B.R., Hradecky P., Letovsky S., RA Nielsen R., Thornton K., Hubisz M.J., Chen R., Meisel R.P., RA Couronne O., Hua S., Smith M.A., Zhang P., Liu J., Bussemaker H.J., RA van Batenburg M.F., Howells S.L., Scherer S.E., Sodergren E., RA Matthews B.B., Crosby M.A., Schroeder A.J., Ortiz-Barrientos D., RA Rives C.M., Metzker M.L., Muzny D.M., Scott G., Steffen D., RA Wheeler D.A., Worley K.C., Havlak P., Durbin K.J., Egan A., Gill R., RA Hume J., Morgan M.B., Miner G., Hamilton C., Huang Y., Waldron L., RA Verduzco D., Clerc-Blankenburg K.P., Dubchak I., Noor M.A.F., RA Anderson W., White K.P., Clark A.G., Schaeffer S.W., Gelbart W.M., RA Weinstock G.M., Gibbs R.A.; RT "Comparative genome sequencing of Drosophila pseudoobscura: RT chromosomal, gene, and cis-element evolution."; RL Genome Res. 15:1-18(2005). RN [2] {ECO:0000313|EMBL:EDY69521.1, ECO:0000313|Proteomes:UP000001819} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=MV2-25 / Tucson 14011-0121.94 RC {ECO:0000313|Proteomes:UP000001819}; RX PubMed=17994087; DOI=10.1038/nature06341; RG Drosophila 12 genomes consortium; RT "Evolution of genes and genomes on the Drosophila phylogeny."; RL Nature 450:203-218(2007). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CM000071; EDY69521.1; -; Genomic_DNA. DR RefSeq; XP_002138963.1; XM_002138927.2. DR EnsemblMetazoa; FBtr0280262; FBpp0278700; FBgn0246483. DR GeneID; 6899003; -. DR KEGG; dpo:Dpse_GA25100; -. DR FlyBase; FBgn0246483; Dpse\GA25100. DR InParanoid; B5E1L9; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG70W3CM; -. DR Proteomes; UP000001819; Chromosome 3. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000001819}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000001819}. FT DOMAIN 7 285 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 769 AA; 87976 MW; 56411FF32D194B02 CRC64; MKISIDGLLV YFPYEYIYPE QYAYMLELKR TLDAKGHCLL EMPSGTGKTA TLLSLIVAYM IEHPETIRKL IYCSRTVPEI EKVIAELQNL MVYYERECVK PPAMTGLVLS SRKNLCIHPE VSKEREGKAV DGKCYGLTAS YIRDKHELDT DTPICQYFEG FSLEGKESTL PIGIYSLDDL KEYGRSRNWC PYFLARYAIS HAQIVVYSYH YLLDPKIAQV VSKEMTRESC VVFDEAHNID NVCIDSMSVK INRRTVERST NALNQLTKLV QDIREEDTNR LNEEYQRMVQ GLKDASVQRE TDMIMANPVL PNDVLTEVVP GNIRNADHFL SFLRRFIEFI KTRLRVHHVV QESPAGFLKD ISAKICIERK PLRFCAERLS SLLRTLEITD MTEYGALTLI THFATLVSTY TKGFTIIIEP FDDKTPTVSN PILHFSCLDS SIAMAPVFSR FQTVVITSGT LSPMDMYPKI LDFDPVVMSS FTMTLARPCL LPMIVSKGND QVTISSKFET REDTAVIRNY GQLLVEVAKT VPDGVVCFFT SYLYLESVVA SWYDQGIVDT LLRYKLLFIE TQDNAETSYA LMNYVKACDC GRGAVLLAVA RGKVSEGVDF DHHYGRAVLM FGIPYVYTQS RILKARLDYL RDQFQIREND FLTFDAMRHA AQCVGRALRG KTDYGIMIFA DKRFSRQDKR SRLPKWIQEH LVDSFCNLST EEAVQLARRW LRRMAQPFSR EDQLGISLLT LAQLENMEQE KLERQAQGKE GVGGQVQEL // ID B5IHH7_ACIB4 Unreviewed; 619 AA. AC B5IHH7; DT 14-OCT-2008, integrated into UniProtKB/TrEMBL. DT 14-OCT-2008, sequence version 1. DT 11-MAY-2016, entry version 43. DE SubName: Full=DEAD_2 domain protein {ECO:0000313|EMBL:ADD08008.1}; DE SubName: Full=DEAD_2 family {ECO:0000313|EMBL:EDY34273.1}; GN OrderedLocusNames=Aboo_0196 {ECO:0000313|EMBL:ADD08008.1}; GN ORFNames=ABOONEI_1241 {ECO:0000313|EMBL:EDY34273.1}; OS Aciduliprofundum boonei (strain DSM 19572 / T469). OC Archaea; Euryarchaeota; DHVE2 group; Aciduliprofundum. OX NCBI_TaxID=439481; RN [1] {ECO:0000313|EMBL:EDY34273.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=T469 {ECO:0000313|EMBL:EDY34273.1}; RX PubMed=18445019; DOI=10.1111/j.1472-4669.2008.00152.x; RA Reysenbach A.L., Flores G.E.; RT "Electron microscopy encounters with unusual thermophiles helps direct RT genomic analysis of Aciduliprofundum boonei."; RL Geobiology 6:331-336(2008). RN [2] {ECO:0000313|EMBL:ADD08008.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=T469 {ECO:0000313|EMBL:ADD08008.1}; RG US DOE Joint Genome Institute; RA Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., RA Pitluck S., Saunders E., Detter J.C., Han C., Tapia R., Land M., RA Hauser L., Kyrpides N., Mikhailova N., Flores G., Reysenbach A.-L., RA Woyke T.; RT "Complete sequence of Aciduliprofundum boonei T469."; RL Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases. RN [3] {ECO:0000313|Proteomes:UP000001400} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=DSM 19572 / T469 {ECO:0000313|Proteomes:UP000001400}; RA Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., RA Pitluck S., Saunders E., Detter J.C., Han C., Tapia R., Land M., RA Hauser L., Kyrpides N., Mikhailova N., Flores G., Reysenbach A.-L., RA Woyke T.; RT "Complete sequence of Aciduliprofundum boonei T469."; RL Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001941; ADD08008.1; -; Genomic_DNA. DR EMBL; DS990540; EDY34273.1; -; Genomic_DNA. DR RefSeq; WP_008086720.1; NZ_DS990540.1. DR STRING; 439481.Aboo_0196; -. DR EnsemblBacteria; ADD08008; ADD08008; Aboo_0196. DR EnsemblBacteria; EDY34273; EDY34273; ABOONEI_1241. DR GeneID; 8827137; -. DR KEGG; abi:Aboo_0196; -. DR eggNOG; arCOG00770; Archaea. DR eggNOG; COG1199; LUCA. DR HOGENOM; HOG000073600; -. DR KO; K10844; -. DR OMA; TETIDQQ; -. DR BioCyc; ABOO439481:GJNL-205-MONOMER; -. DR Proteomes; UP000001400; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR014001; Helicase_ATP-bd. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00487; DEXDc; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 3. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW Complete proteome {ECO:0000313|Proteomes:UP000001400}; KW Reference proteome {ECO:0000313|Proteomes:UP000001400}. FT DOMAIN 1 269 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 619 AA; 71148 MW; 34F126E2FBB4679D CRC64; MRFPYKYRKG QKDIVKDIEE VLENRMHMVF EAPTGSGKTI ATLYPAVKYA IKNDKKVIYL VHTNSQERQV IKEAKKLEIR AIALQGRANL CPLARERNEL QHGSPDELAL LCNKLKKDVK EGNENACIYY ANYLKNGNDI RKIIEENPTA EEFFEKAMNL KICAYEAIKD ALPDATVIVF PYIYFFFPFI RRGIMDKIGV PMGDIILIVD EAHNIPDFAR ELKSMELSVN SLENMEKEAL DYGNPQVLGH SIADIAEFLK EAIYKMQKFV EDEEGIIPHY AFEEEVSNVL GISINDFDTL AKDLIYYGEM VRENKVKHRK LPRSYMYHTG SFLYFWREAY SYEYIRLIKW GKTLSLEVYC LDPATVTDAL LNVHSSIHLS GTLVPNEYKN IVALPDNTIT KRYPSPFPKE NLKILYVDDV TTKYGEVDEN LPRIAEHLTK IISIGKNTAI FFPSYSLLSK IKELLDSKIL SEERGMKTYS LFQMIENFKE KGGSILSVIG GRIFEGLDFP GKLLEIVVIV GIPYPKPTPK VKALQRYYDS KFGNGWEYAF RMPALIKMRQ AIGRLIRSEE DRGIAIILDK RAASFKGDLP LEKAENLVKE IREFFQGNEK GEEGRHREP // ID B6AFA0_CRYMR Unreviewed; 835 AA. AC B6AFA0; DT 25-NOV-2008, integrated into UniProtKB/TrEMBL. DT 25-NOV-2008, sequence version 1. DT 11-MAY-2016, entry version 39. DE SubName: Full=DNA repair helicase family protein {ECO:0000313|EMBL:EEA06891.1}; GN ORFNames=CMU_032760 {ECO:0000313|EMBL:EEA06891.1}; OS Cryptosporidium muris (strain RN66). OC Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; OC Eucoccidiorida; Eimeriorina; Cryptosporidiidae; Cryptosporidium. OX NCBI_TaxID=441375 {ECO:0000313|Proteomes:UP000001460}; RN [1] {ECO:0000313|EMBL:EEA06891.1, ECO:0000313|Proteomes:UP000001460} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=RN66 {ECO:0000313|EMBL:EEA06891.1, RC ECO:0000313|Proteomes:UP000001460}; RA Lorenzi H., Inman J., Miller J., Schobel S., Amedeo P., Caler E.V., RA da Silva J.; RL Submitted (JUN-2008) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; DS989731; EEA06891.1; -; Genomic_DNA. DR RefSeq; XP_002141240.1; XM_002141204.1. DR STRING; 441375.XP_002141240.1; -. DR EnsemblProtists; EEA06891; EEA06891; CMU_032760. DR GeneID; 6996519; -. DR EuPathDB; CryptoDB:CMU_032760; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR Proteomes; UP000001460; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 2. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 2. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EEA06891.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000001460}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EEA06891.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EEA06891.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EEA06891.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000001460}. FT DOMAIN 8 371 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 835 AA; 95235 MW; 33258427D1FF879E CRC64; MVRFFIEEVE VFFPYDYVYP EQLEYMKYLK QILDAHSHGV LEMPTGTGKT VTLFSFITSY QLAHPNLGRL IYCTRTVAEM EKALLELKTV INYRIKELQK DKLALQETNN INISTSENQI LNGSILAIGM SARRNLCINS SVISNSDRDK IDAMCRSMTA PWVRAKKSST RLDNDKSGTQ VIDQSSLQDI EDIIQGNCTD LCPYYEIFDK IWSSDTIPIG VYTIDELRRF GKEWEHPTLK KNTPFCPYYS TKRLIQVAKV VVLNYQYTLD PKVAQASLLG GTVSQGFSHG SNINGKQAGS SYAAALDPEL LGSKEPSIVV FDEAHNIDNI CTEALSVNIN RQVLDGASRN LKSLKNEINK LTEIDEKRLQ EEYNRLVRGL KSTGQIEDDL VLEELQRFPV LPAEVEKLKK ELIPGSIRKA EHFLLIMKKI TLYLQNYIRV FTPKIEGPLT FLNHLESSCM IDVNIIRFCD ERLRSLMNTL QIIDMDQYSP IELVCTFCTI LGTYSKGFVI IVDPYPEVTG LYDPIIQLSC LDSSIAMKPI LDRYQSIVLT SGTLSPLDLY PKLLGFDPVV SESLSMTLDR TCICPMIVTR GSDQVPLSSR YESREDSIIQ QNYGKLVLEI SKKVPDGIVC FFPSYLYMEQ VLGQWYESGI LAQIMEHKLV FVETKDIVST TLALHHFRKA CDIGRGGIFF SIARGKVAEG IDFDRHYGRC VILVGIPYQY TLSRILQSRL SFLKENYNIE ENEFLTFDAM RQASQCVGRI IRSKADYGLM ILADQRYSKK DKREKLPPWI LKYLKQEYCS LSTDMAVNIA LSFLKQMSQP YKKQLSMAEI NQRKI // ID B6HAC8_PENRW Unreviewed; 795 AA. AC B6HAC8; DT 16-DEC-2008, integrated into UniProtKB/TrEMBL. DT 16-DEC-2008, sequence version 1. DT 11-MAY-2016, entry version 54. DE SubName: Full=Pc16g12370 protein {ECO:0000313|EMBL:CAP93907.1}; GN ORFNames=Pc16g12370 {ECO:0000313|EMBL:CAP93907.1}, GN PCH_Pc16g12370 {ECO:0000313|EMBL:CAP93907.1}; OS Penicillium rubens (strain ATCC 28089 / DSM 1075 / NRRL 1951 / OS Wisconsin 54-1255) (Penicillium chrysogenum). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; OC Eurotiomycetidae; Eurotiales; Aspergillaceae; Penicillium; OC Penicillium chrysogenum complex. OX NCBI_TaxID=500485 {ECO:0000313|EMBL:CAP93907.1, ECO:0000313|Proteomes:UP000000724}; RN [1] {ECO:0000313|EMBL:CAP93907.1, ECO:0000313|Proteomes:UP000000724} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 28089 / DSM 1075 / NRRL 1951 / Wisconsin 54-1255 RC {ECO:0000313|Proteomes:UP000000724}; RX PubMed=18820685; DOI=10.1038/nbt.1498; RA van den Berg M.A., Albang R., Albermann K., Badger J.H., Daran J.-M., RA Driessen A.J.M., Garcia-Estrada C., Fedorova N.D., Harris D.M., RA Heijne W.H.M., Joardar V.S., Kiel J.A.K.W., Kovalchuk A., Martin J.F., RA Nierman W.C., Nijland J.G., Pronk J.T., Roubos J.A., RA van der Klei I.J., van Peij N.N.M.E., Veenhuis M., von Doehren H., RA Wagner C., Wortman J.R., Bovenberg R.A.L.; RT "Genome sequencing and analysis of the filamentous fungus Penicillium RT chrysogenum."; RL Nat. Biotechnol. 26:1161-1168(2008). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AM920431; CAP93907.1; -; Genomic_DNA. DR RefSeq; XP_002561536.1; XM_002561490.1. DR STRING; 500485.XP_002561536.1; -. DR EnsemblFungi; CAP93907; CAP93907; PCH_Pc16g12370. DR GeneID; 8314962; -. DR KEGG; pcs:Pc16g12370; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR HOGENOM; HOG000205390; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG7BKD38; -. DR BioCyc; PCHR:PC16G12370-MONOMER; -. DR Proteomes; UP000000724; Contig Pc00c16. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000000724}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000000724}. FT DOMAIN 7 289 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 248 297 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 795 AA; 91049 MW; DDB3342E44558EF0 CRC64; MKFFIDDLPV LFPYPRIYPE QYAYMCDLKK TLDVGGHCVL EMPSGTGKTV SLLSLIVAYQ QHYPEHRKLI YCSRTMSEIE KALAELKALM EHRAKELGHE EEFRALGLTS RKNLCLHPSV KREKSGTVVD ARCRSLTAGF VKEKKERGED VELCVYHENL DLLEPHNLVP PGVFTLDGLS RYGEEHKQCP YFSARRMMPW CNIIIYSYHY LLDPKIAERV SRELSKDCIV VFDEAHNIDN VCIESLSIDL SEDSLRKATR GANNLERRIE DMKSTDEEKL KNEYSKLVEG LQEAEKARDE DQFISNPVLP DDLLKEAVPG NIRRAEHFIS FLKRFIEYLK TRMKVTHTIS ETPPSFLTHL KDLTYIERKP LRFCAERLTS LVRTLELVNI EDYQPLQEVA TFATLVATYD KGFVLILEPF ESEAATVPNP ILHFTCLDAA IAIKPVFDRF SSVIITSGTL SPLEMYPKML GFTAVLQESY SMTLARRSFL PMIVTRGSDQ AQVSSSFGIR NDPGVVRNYG SLVTEFARIT PDGVVVFFPS YLYMESIISM WQGMGILDQI WNYKLILVET PDAQESSLAL ETYRTACCNG RGAILFCVAR GKVSEGIDFD HHYGRAVLCI GVPFQYTESR ILKARLEFLR ENYRIRENDF LSFDAIRHAA QCLGRVLRGK DDYGVMVLAD RRFERKRPQL PKWINQAMLD SETNLSTDMA VSNAKNFLRT MAQPFKSKDQ EGISTWGLAD IERHEAKRRT EEERMMREEL NNGHAMDGMV PSASRIVTDE YDDNIDQDLM MLDAP // ID B6JX67_SCHJY Unreviewed; 773 AA. AC B6JX67; DT 16-DEC-2008, integrated into UniProtKB/TrEMBL. DT 16-DEC-2008, sequence version 1. DT 11-MAY-2016, entry version 42. DE SubName: Full=Transcription factor TFIIH complex subunit Rad15 {ECO:0000313|EMBL:EEB05968.1}; GN ORFNames=SJAG_00995 {ECO:0000313|EMBL:EEB05968.1}; OS Schizosaccharomyces japonicus (strain yFS275 / FY16936) (Fission OS yeast). OC Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; OC Schizosaccharomycetes; Schizosaccharomycetales; OC Schizosaccharomycetaceae; Schizosaccharomyces. OX NCBI_TaxID=402676 {ECO:0000313|EMBL:EEB05968.1, ECO:0000313|Proteomes:UP000001744}; RN [1] {ECO:0000313|EMBL:EEB05968.1, ECO:0000313|Proteomes:UP000001744} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=yFS275 / FY16936 {ECO:0000313|Proteomes:UP000001744}; RX PubMed=21511999; DOI=10.1126/science.1203357; RA Rhind N., Chen Z., Yassour M., Thompson D.A., Haas B.J., Habib N., RA Wapinski I., Roy S., Lin M.F., Heiman D.I., Young S.K., Furuya K., RA Guo Y., Pidoux A., Chen H.M., Robbertse B., Goldberg J.M., Aoki K., RA Bayne E.H., Berlin A.M., Desjardins C.A., Dobbs E., Dukaj L., Fan L., RA FitzGerald M.G., French C., Gujja S., Hansen K., Keifenheim D., RA Levin J.Z., Mosher R.A., Mueller C.A., Pfiffner J., Priest M., RA Russ C., Smialowska A., Swoboda P., Sykes S.M., Vaughn M., RA Vengrova S., Yoder R., Zeng Q., Allshire R., Baulcombe D., RA Birren B.W., Brown W., Ekwall K., Kellis M., Leatherwood J., Levin H., RA Margalit H., Martienssen R., Nieduszynski C.A., Spatafora J.W., RA Friedman N., Dalgaard J.Z., Baumann P., Niki H., Regev A., Nusbaum C.; RT "Comparative functional genomics of the fission yeasts."; RL Science 332:930-936(2011). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; KE651166; EEB05968.1; -; Genomic_DNA. DR RefSeq; XP_002172261.1; XM_002172225.1. DR STRING; 402676.XP_002172261.1; -. DR EnsemblFungi; EEB05968; EEB05968; SJAG_00995. DR GeneID; 7050865; -. DR EuPathDB; FungiDB:SJAG_00995; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000001744; Unassembled WGS sequence. DR GO; GO:0000439; C:core TFIIH complex; IEA:EnsemblFungi. DR GO; GO:0005829; C:cytosol; IEA:EnsemblFungi. DR GO; GO:0005675; C:holo TFIIH complex; IEA:EnsemblFungi. DR GO; GO:0000112; C:nucleotide-excision repair factor 3 complex; IEA:EnsemblFungi. DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:EnsemblFungi. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0043141; F:ATP-dependent 5'-3' DNA helicase activity; IEA:EnsemblFungi. DR GO; GO:0003684; F:damaged DNA binding; IEA:EnsemblFungi. DR GO; GO:0000717; P:nucleotide-excision repair, DNA duplex unwinding; IEA:EnsemblFungi. DR GO; GO:0033683; P:nucleotide-excision repair, DNA incision; IEA:EnsemblFungi. DR GO; GO:0070816; P:phosphorylation of RNA polymerase II C-terminal domain; IEA:EnsemblFungi. DR GO; GO:0045951; P:positive regulation of mitotic recombination; IEA:EnsemblFungi. DR GO; GO:0010525; P:regulation of transposition, RNA-mediated; IEA:EnsemblFungi. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:EnsemblFungi. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000001744}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000001744}. FT DOMAIN 7 283 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 773 AA; 88273 MW; 8C83E73378B1AB1B CRC64; MKFYIDDLPV IFPYPRIYPE QYQYMCDLKK SLDVGGVALL EMPSGTGKTI SLLSLIISYQ QFYPEQRKLI YCSRTMSEID KALAELKRLM AYREKELGRR EPFLGLGLTS RKNLCLHPSV RREKNGNVVD ARCRALTAGF VKEKKLAGMD VELCDFHENL EDLEPHALVP EGVWTLDDLT EYGQKTTRCP YFSARRMLPF CNVIIYSYHY LLDPKIAERV SRELSKDCIV VFDEAHNIDN VCIESLSIDL TESSLRKASR GITALERKVA EVKQVDAGKL QDEYRKLVQG LREADEASQE QQFMSNPVLP EDVLKEAVPG NIRRAEHFIA FLKRFIEYLK TRMKVLYVIA ETPASFLQHM KDLTFIERKP LRFCAERLTS LVRTLELPIV DDFHSLQQIA TFATLVATYE RGFVLILEPY ETENATVPNP VLHFACLDAS IAIKPVFDKF RSVIITSGTL SPLNMYPKML QFETVMMESY GMSLARNSFL PMVITRGSDQ VAISSKFEAR NDPSIVRNYG NILIEFSKTT PDGLVAFFPS YLYLESIVSS WQSMGILDEV WKYKLILVET PDAQETTLAL ETYRAACCNG RGAVLLSVAR GKVSEGVDFD HQYGRTVIMF GIPYQYTESR ILKARLEFLR DTYQIRENDF LTFDAMRHAA QCLGRVLRGK DDSGIMVLAD KRYGRSDKRS KLPKWIQQYT SEGAANLSTD MAVALAKKFL RTMAQPFSLE DQEGISWWTV EELKAHQKSS LIAAKSKDDS MDFDIEEDAK MTP // ID B6KSU0_TOXGV Unreviewed; 1065 AA. AC B6KSU0; A0A0N5EBL2; B9QNG7; S8G1Y5; DT 16-DEC-2008, integrated into UniProtKB/TrEMBL. DT 16-DEC-2008, sequence version 1. DT 11-MAY-2016, entry version 50. DE SubName: Full=DNA excision repair helicase {ECO:0000313|EMBL:ESS28771.1}; GN ORFNames=TGVEG_216870 {ECO:0000313|EMBL:ESS28771.1}; OS Toxoplasma gondii (strain ATCC 50861 / VEG). OC Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; OC Eucoccidiorida; Eimeriorina; Sarcocystidae; Toxoplasma. OX NCBI_TaxID=432359 {ECO:0000313|EMBL:ESS28771.1, ECO:0000313|Proteomes:UP000002226}; RN [1] {ECO:0000313|Proteomes:UP000002226} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 50861 / VEG {ECO:0000313|Proteomes:UP000002226}; RA Lorenzi H., Inman J., Amedeo P., Brunk B., Roos D., Caler E.; RT "Annotation of Toxoplasma gondii VEG."; RL Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:ESS28771.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AAYL02000331; ESS28771.1; -; Genomic_DNA. DR STRING; 5811.TGME49_016870; -. DR EnsemblProtists; ESS28771; ESS28771; TGVEG_216870. DR KEGG; tgo:TGME49_016870; -. DR EuPathDB; ToxoDB:TGME49_216870; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; B6KSU0; -. DR KO; K10844; -. DR OMA; IKITRRT; -. DR Proteomes; UP000002226; Partially assembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:InterPro. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 4. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 3. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:ESS28771.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000002226}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:ESS28771.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:ESS28771.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:ESS28771.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000002226}. SQ SEQUENCE 1065 AA; 119380 MW; FB6537F24F180D1D CRC64; MVVFQIDEVT VYFPYDFIYP EQYAYIRALK HTLDAKGHAV LEMPTGTGKT VALLSLLTSY QLAHPRLGKI LYCTRTVPEM EKALLELKGV IDYRIEEIRK ARETKARQEQ SPCEEKEQTT SASGDSLGRK RELGTPGAAP LQPISKTTES EDPPYIGKDM ARDGYILGVG LSARRNMCIN PAVYNQPDRE RIDEACRQLT APWVRQQHLT SYNPPSSFFS ASSSHGDAPT GDIENLGLLA ERGARSCGGS CGLERRGNGE GGEREDGEEG KEERERRRRR EALESNEEAE PGHYSPSLCA WYENLDRYFA PQFFPAGVYT IEELKIAAGN WRHPLLHRNL PFCPYFLARR LLHIANVVVL NYQYILDPKV SQAALLTPLP DGMSSSHTTG GQTRSTYSNP YQRRGFGGVS TPEEVQYEGS VVVFDEAHNI DNVCIEALSV NINRSVMEAA LRNLSQLAEK IEEVKKEDAE RLREEYENLV RGIKRRRATE EESASSSSAP SSPPSAASAA TSSSSASEVE RGKEGQETER TDGEEAGGGS ACVRPEDEGE RIREKRKESR DPGRIVVANE TLDLLASPLL PDDALLEQAV PGSIRKAEHF VALMRRIVSY LKSYIKIYEL KSEGPLSFLH MFEKETHIDA SLLKFFYDRL KSLFNTLQIT EVESYAPLTL VADFCTLVAT YCEGFILICD PYPEAVGLYD PLLQLSCLDA SLAMQPVLKR FQSLILTSGT ISPLELYPKL LNFVPVITES FPMSLDRNCI CPLIVARGSD QIPLTSKFEY RHDMNVLRNY SNLLIDLCKH VPDGLVCFFT SYSYMESVLS SWYHSGVLAQ VLDYKLIFIE TKDVVATTLA LHNFRRACEC GRGAVFFSIA RGKVAEGIDF DRHFGRCVVL FGVPFQYTLS RVLKARLDFI REHYQIPDNE FLTFDAMRQA AQCVGRVIRS KNDYGLMIFA DARYSRIDKR SKLPPWILKH LDNAHLALNT ETAISVARTF LRHMSQPPPP PSASRLDARQ LQQPQQQQCW ELVRRTLHLS ANSCVPAQPK EVGEGVPSGV KTADEKQKPP TGDGQ // ID B6QC92_TALMQ Unreviewed; 794 AA. AC B6QC92; DT 16-DEC-2008, integrated into UniProtKB/TrEMBL. DT 16-DEC-2008, sequence version 1. DT 11-MAY-2016, entry version 44. DE SubName: Full=TFIIH complex helicase Rad3, putative {ECO:0000313|EMBL:EEA25586.1}; GN ORFNames=PMAA_066900 {ECO:0000313|EMBL:EEA25586.1}; OS Talaromyces marneffei (strain ATCC 18224 / CBS 334.59 / QM 7333) OS (Penicillium marneffei). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; OC Eurotiomycetidae; Eurotiales; Trichocomaceae; Talaromyces. OX NCBI_TaxID=441960 {ECO:0000313|EMBL:EEA25586.1, ECO:0000313|Proteomes:UP000001294}; RN [1] {ECO:0000313|Proteomes:UP000001294} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 18224 / CBS 334.59 / QM 7333 RC {ECO:0000313|Proteomes:UP000001294}; RX PubMed=25676766; DOI=10.1128/genomeA.01559-14; RA Nierman W.C., Fedorova-Abrams N.D., Andrianopoulos A.; RT "Genome sequence of the AIDS-associated pathogen Penicillium marneffei RT (ATCC18224) and its near taxonomic relative Talaromyces stipitatus RT (ATCC10500)."; RL Genome Announc. 3:E0155914-E0155914(2015). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; DS995900; EEA25586.1; -; Genomic_DNA. DR RefSeq; XP_002146133.1; XM_002146097.1. DR STRING; 441960.XP_002146133.1; -. DR EnsemblFungi; EEA25586; EEA25586; PMAA_066900. DR GeneID; 7023832; -. DR EuPathDB; FungiDB:PMAA_066900; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000001294; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 5. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EEA25586.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000001294}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EEA25586.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EEA25586.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EEA25586.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000001294}. FT DOMAIN 7 283 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 248 275 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 794 AA; 90595 MW; E4354E8B35374CE7 CRC64; MRFKIDELEV LFPYPKIYPE QWQYMCDLKK ALDASGHCVL EMPSGTGKTV TLLSLIVAYQ QHHGDSRKLI YCSRTMSEID KALHELKALM KYRASQLGYT EDFRGLGLSS RKNLCLHPSV KREKSGAVVD ARCRSLTASF VVQKKERGED VETCTYHDNL DLLEPHNLIE PGVFTFGDLL RYCQEKVTCP YFTVRRMLPY CNVIIYSYHY LLDPKIAERV SRELSKDCIV VFDEAHNIDN VAIESLSIDL TEDSLRKASR GAKNLERKIE EMKSSDAEKL QSEYTKLVEG LKATEEARDE DLIMSNPVLP QDLLSEAVPG NIRRAEHFIA FLQRFIQYLM TRMKVTHTIS ETTPSFLQHL RELVFIEAKP LRFCSERLTS LVRTLELMNI EDYQPLQEVA MFATLVSTYD RGFLLILEPF ESEAATVPNP VLHLACLDAA IAFRPVVERF SSIVVTSGTL TPLDMFPKML NFTPVLQESY TMTLARRSFL PMIVTRGSDQ SQISSSFQTR NDPSNLRNFG SLLLDFAKIV PDGIVVFFPS YLYMESTLHV WSGMGILDMI WNYKLILVET PDAQESSLAL ETYRTACCNG RGAILMSVAR GKVAEGVDFD HQYGRAVICI GVPFQYTESR ILRARLEFLR ENYGIRENDF LSFDAMRHAS QCLGRVIRGK DDYGIMVLAD KRFARKRSQL PKWISQNILE SEVNLSTDMA VATAKNFLRT MAQPFRAKDH EGISSWTPAQ LEEQIVKRKM EEERVERGEE PVAARQRDGG NRAVGAQADE FDDDIDDEMM MLDA // ID B6UCC8_MAIZE Unreviewed; 758 AA. AC B6UCC8; DT 16-DEC-2008, integrated into UniProtKB/TrEMBL. DT 16-DEC-2008, sequence version 1. DT 11-MAY-2016, entry version 57. DE SubName: Full=DNA repair helicase UVH6 {ECO:0000313|EMBL:ACG47011.1}; DE SubName: Full=Uncharacterized protein {ECO:0000313|EnsemblPlants:GRMZM2G097605_P01}; GN Name=LOC100285960 {ECO:0000313|EnsemblPlants:GRMZM2G097605_P01}; GN ORFNames=ZEAMMB73_931460 {ECO:0000313|EMBL:AFW57599.1}; OS Zea mays (Maize). OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; OC PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; OC Zea. OX NCBI_TaxID=4577 {ECO:0000313|EMBL:ACG47011.1}; RN [1] {ECO:0000313|EMBL:ACG47011.1} RP NUCLEOTIDE SEQUENCE. RX PubMed=18937034; DOI=10.1007/s11103-008-9415-4; RA Alexandrov N.N., Brover V.V., Freidin S., Troukhan M.E., RA Tatarinova T.V., Zhang H., Swaller T.J., Lu Y.P., Bouck J., RA Flavell R.B., Feldmann K.A.; RT "Insights into corn genes derived from large-scale cDNA sequencing."; RL Plant Mol. Biol. 69:179-194(2009). RN [2] {ECO:0000313|EMBL:AFW57599.1, ECO:0000313|EnsemblPlants:GRMZM2G097605_P01, ECO:0000313|Proteomes:UP000007305} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=cv. B73 {ECO:0000313|EnsemblPlants:GRMZM2G097605_P01, RC ECO:0000313|Proteomes:UP000007305}; RX PubMed=19965430; DOI=10.1126/science.1178534; RA Schnable P.S., Ware D., Fulton R.S., Stein J.C., Wei F., Pasternak S., RA Liang C., Zhang J., Fulton L., Graves T.A., Minx P., Reily A.D., RA Courtney L., Kruchowski S.S., Tomlinson C., Strong C., Delehaunty K., RA Fronick C., Courtney B., Rock S.M., Belter E., Du F., Kim K., RA Abbott R.M., Cotton M., Levy A., Marchetto P., Ochoa K., Jackson S.M., RA Gillam B., Chen W., Yan L., Higginbotham J., Cardenas M., RA Waligorski J., Applebaum E., Phelps L., Falcone J., Kanchi K., RA Thane T., Scimone A., Thane N., Henke J., Wang T., Ruppert J., RA Shah N., Rotter K., Hodges J., Ingenthron E., Cordes M., Kohlberg S., RA Sgro J., Delgado B., Mead K., Chinwalla A., Leonard S., Crouse K., RA Collura K., Kudrna D., Currie J., He R., Angelova A., Rajasekar S., RA Mueller T., Lomeli R., Scara G., Ko A., Delaney K., Wissotski M., RA Lopez G., Campos D., Braidotti M., Ashley E., Golser W., Kim H., RA Lee S., Lin J., Dujmic Z., Kim W., Talag J., Zuccolo A., Fan C., RA Sebastian A., Kramer M., Spiegel L., Nascimento L., Zutavern T., RA Miller B., Ambroise C., Muller S., Spooner W., Narechania A., Ren L., RA Wei S., Kumari S., Faga B., Levy M.J., McMahan L., Van Buren P., RA Vaughn M.W., Ying K., Yeh C.-T., Emrich S.J., Jia Y., Kalyanaraman A., RA Hsia A.-P., Barbazuk W.B., Baucom R.S., Brutnell T.P., Carpita N.C., RA Chaparro C., Chia J.-M., Deragon J.-M., Estill J.C., Fu Y., RA Jeddeloh J.A., Han Y., Lee H., Li P., Lisch D.R., Liu S., Liu Z., RA Nagel D.H., McCann M.C., SanMiguel P., Myers A.M., Nettleton D., RA Nguyen J., Penning B.W., Ponnala L., Schneider K.L., Schwartz D.C., RA Sharma A., Soderlund C., Springer N.M., Sun Q., Wang H., Waterman M., RA Westerman R., Wolfgruber T.K., Yang L., Yu Y., Zhang L., Zhou S., RA Zhu Q., Bennetzen J.L., Dawe R.K., Jiang J., Jiang N., Presting G.G., RA Wessler S.R., Aluru S., Martienssen R.A., Clifton S.W., McCombie W.R., RA Wing R.A., Wilson R.K.; RT "The B73 maize genome: complexity, diversity, and dynamics."; RL Science 326:1112-1115(2009). RN [3] {ECO:0000313|EMBL:AFW57599.1} RP NUCLEOTIDE SEQUENCE. RG Maize Genome Sequencing Project; RL Submitted (FEB-2013) to the EMBL/GenBank/DDBJ databases. RN [4] {ECO:0000313|EnsemblPlants:GRMZM2G097605_P01} RP IDENTIFICATION. RC STRAIN=cv. B73 {ECO:0000313|EnsemblPlants:GRMZM2G097605_P01}; RG EnsemblPlants; RL Submitted (FEB-2015) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; EU974893; ACG47011.1; -; mRNA. DR EMBL; CM000786; AFW57599.1; -; Genomic_DNA. DR RefSeq; NP_001152321.1; NM_001158849.1. DR UniGene; Zm.28170; -. DR STRING; 4577.GRMZM2G097605_P01; -. DR EnsemblPlants; GRMZM2G097605_T01; GRMZM2G097605_P01; GRMZM2G097605. DR GeneID; 100285960; -. DR Gramene; GRMZM2G097605_T01; GRMZM2G097605_P01; GRMZM2G097605. DR KEGG; zma:100285960; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR HOGENOM; HOG000205390; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR Proteomes; UP000007305; Chromosome 10. DR ExpressionAtlas; B6UCC8; baseline. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0000724; P:double-strand break repair via homologous recombination; IEA:EnsemblPlants. DR GO; GO:0010286; P:heat acclimation; IEA:EnsemblPlants. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR GO; GO:0045893; P:positive regulation of transcription, DNA-templated; IEA:EnsemblPlants. DR GO; GO:0043687; P:post-translational protein modification; IEA:EnsemblPlants. DR GO; GO:0006457; P:protein folding; IEA:EnsemblPlants. DR GO; GO:0009644; P:response to high light intensity; IEA:EnsemblPlants. DR GO; GO:0042542; P:response to hydrogen peroxide; IEA:EnsemblPlants. DR GO; GO:0010212; P:response to ionizing radiation; IEA:EnsemblPlants. DR GO; GO:0009411; P:response to UV; IEA:EnsemblPlants. DR GO; GO:0000394; P:RNA splicing, via endonucleolytic cleavage and ligation; IEA:EnsemblPlants. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:EnsemblPlants. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 2: Evidence at transcript level; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:ACG47011.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000007305}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:ACG47011.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:ACG47011.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:ACG47011.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000007305}. FT DOMAIN 7 288 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 758 AA; 85654 MW; 7B43612B59210A85 CRC64; MRFDLDGLPV HFPYAAIYPE QHAYMGELKR ALDARGHALL EMPTGTGKTA ALISLITSYS LANPARPLRL IYCTRTVHEM EKTLAELRLL FAHLPPAASR SLLALGLSSR KNLCIHPQAS AAAARDSVDT ACRRLTASWV REKASSDPDS TPLCEFYETF DRAAAAGDLA SFMPPGVYTL ADLRALGRER RVCPYFLARQ MVKYANVVVY SYQYLLDPKV ASIVSREMQK ECVVVFDEAH NIDNVCIEAL SVSIRKQTLE GAERNLRRIS QEIDRFKATD ANRLRAEYNR LVDGLAQRGN LPISDAWLAN PSLPDDILKE AVPGNIRRAE HFLAVLRRLV RFLDGRLETE NVENEMPVSF VASIHSQAGI DQKMLRFCYD RLHSLMMTLE ITDTDEFMHI QTICDFATLI GTYTRGFSII IEPYDDRMPD IRDPVIQLSC HDASLAIRPV FDRFETVVIT SGTLSPIDLY PRLLNFNPVI SRSFTMSLTR DCICPMVLTR GSDQLPVSTK FDMRSDPGVV RNYGRLLLEM ASAVPDGIVC FFVSYSYMDG IVNSWHEMGI LQDIMQHKLV FIETPDVVET TLALDNYRKA CDCGRGAIFF SVARGKVAEG IDFDRHYGRL VIMFGVPFQY TLSRILLARL EYLRETFQIK EGDFLTFDAL RQAAQCVGRV IRSKADYGMM IFADKRYSRH DKRSKLPGWI LSHLHDAHLN LSTDMALHIA REFLRRMAQP YDKAGSGGKK TLLTEEDLEN LAQDGMAM // ID B7FRR5_PHATC Unreviewed; 782 AA. AC B7FRR5; DT 10-FEB-2009, integrated into UniProtKB/TrEMBL. DT 10-FEB-2009, sequence version 1. DT 11-MAY-2016, entry version 47. DE SubName: Full=Xeroderma pigmentosum group D complementing protein {ECO:0000313|EMBL:EEC50662.1}; GN Name=ERCC2 {ECO:0000313|EMBL:EEC50662.1}; GN ORFNames=PHATRDRAFT_54072 {ECO:0000313|EMBL:EEC50662.1}; OS Phaeodactylum tricornutum (strain CCAP 1055/1). OC Eukaryota; Stramenopiles; Bacillariophyta; Bacillariophyceae; OC Bacillariophycidae; Naviculales; Phaeodactylaceae; Phaeodactylum. OX NCBI_TaxID=556484 {ECO:0000313|Proteomes:UP000000759}; RN [1] {ECO:0000313|EMBL:EEC50662.1, ECO:0000313|Proteomes:UP000000759} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=CCAP 1055/1 {ECO:0000313|EMBL:EEC50662.1, RC ECO:0000313|Proteomes:UP000000759}; RX PubMed=18923393; DOI=10.1038/nature07410; RA Bowler C., Allen A.E., Badger J.H., Grimwood J., Jabbari K., Kuo A., RA Maheswari U., Martens C., Maumus F., Otillar R.P., Rayko E., RA Salamov A., Vandepoele K., Beszteri B., Gruber A., Heijde M., RA Katinka M., Mock T., Valentin K., Verret F., Berges J.A., Brownlee C., RA Cadoret J.P., Chiovitti A., Choi C.J., Coesel S., De Martino A., RA Detter J.C., Durkin C., Falciatore A., Fournet J., Haruta M., RA Huysman M.J., Jenkins B.D., Jiroutova K., Jorgensen R.E., Joubert Y., RA Kaplan A., Kroger N., Kroth P.G., La Roche J., Lindquist E., RA Lommer M., Martin-Jezequel V., Lopez P.J., Lucas S., Mangogna M., RA McGinnis K., Medlin L.K., Montsant A., Oudot-Le Secq M.P., Napoli C., RA Obornik M., Parker M.S., Petit J.L., Porcel B.M., Poulsen N., RA Robison M., Rychlewski L., Rynearson T.A., Schmutz J., Shapiro H., RA Siaut M., Stanley M., Sussman M.R., Taylor A.R., Vardi A., RA von Dassow P., Vyverman W., Willis A., Wyrwicz L.S., Rokhsar D.S., RA Weissenbach J., Armbrust E.V., Green B.R., Van de Peer Y., RA Grigoriev I.V.; RT "The Phaeodactylum genome reveals the evolutionary history of diatom RT genomes."; RL Nature 456:239-244(2008). RN [2] {ECO:0000313|EMBL:EEC50662.1, ECO:0000313|Proteomes:UP000000759} RP GENOME REANNOTATION. RC STRAIN=CCAP 1055/1 {ECO:0000313|EMBL:EEC50662.1, RC ECO:0000313|Proteomes:UP000000759}; RG Diatom Consortium; RA Grigoriev I., Grimwood J., Kuo A., Otillar R.P., Salamov A., RA Detter J.C., Lindquist E., Shapiro H., Lucas S., Glavina del Rio T., RA Pitluck S., Rokhsar D., Bowler C.; RL Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CM000606; EEC50662.1; -; Genomic_DNA. DR RefSeq; XP_002177848.1; XM_002177812.1. DR UniGene; Ptc.9934; -. DR GeneID; 7197063; -. DR KEGG; pti:PHATRDRAFT_54072; -. DR HOGENOM; HOG000205390; -. DR InParanoid; B7FRR5; -. DR KO; K10844; -. DR Proteomes; UP000000759; Chromosome 2. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000000759}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000000759}. FT DOMAIN 7 302 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 782 AA; 87743 MW; E89FCD48C1A1851F CRC64; MRFDLDGLDV FFPYDRIYLE QHQYMRALKQ SLDAGGHCLL EMPTGTGKTV CLLSLITSYQ FANPSAGKLV YCTRTVPEMN HVMEELATVL AYRSQELQRH QEENILPMDT DGDIENVPVA GTLCLSSRRN MCVHERVMAE SDREAVDAAC RSLTASWVLE EAQKRPGSIE TCSYYDNFHA AGESTSMPSG VYDLEELQKW GKRRGWCPYY LTRQAINHAN ILVFNYQYML DPKVAKMVSK ELEAESIVVF DEAHNIDSVC IEALSVTIND RGLEQATRSL GRLSSEVSRL KASDNQRLQT EYQNLVNGLI DQGLLDAPAN DAGLTSNVLN PDVLNEAVPG NIRRAEHFIG FMKKVVEHLK ARLRSVAGPN GGVRSETPLA FLHRMTNGTS LEAKPLRFAY SRLSSLLRTL QVSNLDDFNS LTDVADFSSL LAAYSEGVAK FAIIMEPNGS SIPGATDPVI QLVCLDSSLA IAPLFKRFGS VIITSGTLSP IDLYPKLLQF EPCVSESLSM STFRPCIRPL VITKGSDQLA VSTKYEDRGD MGVIRNYGTM LVELCSTIPD GVVAFFTSYS YMESLISEWD AIGILRELTK SKLVFIETKD VVETTLALDN YRRACDCGRG AVFLSVARGK VSEGINFDRH YGRAVIMFGV PFQYTLSHTL RARLEYLQTH YQIREQDFLN FDAIRQASQC VGRVIRSKTD YGLMIFADSR YNRHDKRSKL PKWIQQFMSD HFLNLSTDMA LSHVKQFLRL MGQPIDQEAL QSNLPSLSVV PEKDRAHPEQ LR // ID B7P2J8_IXOSC Unreviewed; 758 AA. AC B7P2J8; DT 10-FEB-2009, integrated into UniProtKB/TrEMBL. DT 10-FEB-2009, sequence version 1. DT 11-MAY-2016, entry version 50. DE SubName: Full=DNA repair helicase rad3/xp-D, putative {ECO:0000313|EMBL:EEC00820.1}; GN ORFNames=IscW_ISCW000859 {ECO:0000313|EMBL:EEC00820.1}; OS Ixodes scapularis (Black-legged tick) (Deer tick). OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; OC Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Ixodinae; Ixodes. OX NCBI_TaxID=6945 {ECO:0000313|Proteomes:UP000001555}; RN [1] {ECO:0000313|EMBL:EEC00820.1, ECO:0000313|Proteomes:UP000001555} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Wikel {ECO:0000313|Proteomes:UP000001555}; RG Ixodes scapularis Genome Project Consortium; RA Caler E., Hannick L.I., Bidwell S., Joardar V., Thiagarajan M., RA Amedeo P., Galinsky K.J., Schobel S., Inman J., Hostetler J., RA Miller J., Hammond M., Megy K., Lawson D., Kodira C., Sutton G., RA Meyer J., Hill C.A., Birren B., Nene V., Collins F., RA Alarcon-Chaidez F., Wikel S., Strausberg R.; RT "Annotation of Ixodes scapularis."; RL Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; DS622764; EEC00820.1; -; Genomic_DNA. DR RefSeq; XP_002402458.1; XM_002402414.1. DR UniGene; Isc.23283; -. DR STRING; 6945.ISCW000859-PA; -. DR EnsemblMetazoa; ISCW000859-RA; ISCW000859-PA; ISCW000859. DR GeneID; 8023672; -. DR KEGG; isc:IscW_ISCW000859; -. DR VectorBase; ISCW000859; Ixodes scapularis. DR CTD; 8023672; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; B7P2J8; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG70W3CM; -. DR PhylomeDB; B7P2J8; -. DR Proteomes; UP000001555; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EEC00820.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000001555}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EEC00820.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EEC00820.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EEC00820.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000001555}. FT DOMAIN 8 287 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 258 300 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 758 AA; 86676 MW; 85DD29C8B4D5B59A CRC64; MRRIDVDGLT VFFPYEYIYP EQYSYMLELK QCLDAKGHGV LEMPSGTGKT VTLLSLILSY IKANPAMVSK LIYCSRTLPE IEKVVEELRR LLKHYHKETG EDMNVLGLCL SSRKNLCIHP EVSKERDGHV VDGKCYLLTA PIYIRKSYRW DVVVTFRPVL QNFDAHGREF ILPTGVYSLD DLKEYGMEHQ YCPYFTARQA VLHATVVVYS YHYLLDPKIA DLVSKEMTRS SVVIFDEAHN IDNVCIESMS VRINKRTIDG SSENIDTLEQ TIKELKEQDA EKLKDEYERL VEGLRDANVA RETDAILANP ILPDEVLQEA VPGNIRLAEH FVAFLRRLLE YVKMRLRVQH VVQESPAAFL RDILHKVCIE RKPLRFCSER MRSMVKTLEI ADPTNFSAVI KLCSFATLVS TYTKGFTLIV EPYDDRTPGV PNPVLNLSCM DASIAIKPVF NRFQSVIITS GTLSPVDMYP KILDFRPVIS ASFTITLARP SICPMIVSKG NDQVAMTSKF ETRDDIAVVR NYGTLLVEVA SSVPDGVVCF FTSYMYLEGV VASWYEQGVI DQIQRRKLLF IETQDAAETS LALVNYIKAC ENGRGAVLLS VARGKVSEGV DFGKAVLMFG IPFVYTQSRI LRARLEYLRD QYQIRENDFL TFDAMRHAAQ CVGRALRGKT DYGIMIFADK RFARWDKRSK LPRWIQEYLK DSLCNLSIEE AMQVVRRFLK QMAQPFTRED QLGLSLLTAE QLESQDTKKK LESRIQLY // ID B8C2D9_THAPS Unreviewed; 770 AA. AC B8C2D9; DT 03-MAR-2009, integrated into UniProtKB/TrEMBL. DT 03-MAR-2009, sequence version 1. DT 11-MAY-2016, entry version 49. DE SubName: Full=Nucleotide excision repair protein ERCC2 {ECO:0000313|EMBL:EED91935.1}; DE EC=3.6.1.- {ECO:0000313|EMBL:EED91935.1}; GN Name=ERCC2 {ECO:0000313|EMBL:EED91935.1}; GN ORFNames=THAPSDRAFT_268868 {ECO:0000313|EMBL:EED91935.1}; OS Thalassiosira pseudonana (Marine diatom) (Cyclotella nana). OC Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; OC Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; OC Thalassiosira. OX NCBI_TaxID=35128 {ECO:0000313|Proteomes:UP000001449}; RN [1] {ECO:0000313|EMBL:EED91935.1, ECO:0000313|Proteomes:UP000001449} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=CCMP1335 {ECO:0000313|EMBL:EED91935.1, RC ECO:0000313|Proteomes:UP000001449}; RX PubMed=15459382; DOI=10.1126/science.1101156; RA Armbrust E.V., Berges J.A., Bowler C., Green B.R., Martinez D., RA Putnam N.H., Zhou S., Allen A.E., Apt K.E., Bechner M., RA Brzezinski M.A., Chaal B.K., Chiovitti A., Davis A.K., Demarest M.S., RA Detter J.C., Glavina T., Goodstein D., Hadi M.Z., Hellsten U., RA Hildebrand M., Jenkins B.D., Jurka J., Kapitonov V.V., Kroger N., RA Lau W.W., Lane T.W., Larimer F.W., Lippmeier J.C., Lucas S., RA Medina M., Montsant A., Obornik M., Parker M.S., Palenik B., RA Pazour G.J., Richardson P.M., Rynearson T.A., Saito M.A., RA Schwartz D.C., Thamatrakoln K., Valentin K., Vardi A., Wilkerson F.P., RA Rokhsar D.S.; RT "The genome of the diatom Thalassiosira pseudonana: ecology, RT evolution, and metabolism."; RL Science 306:79-86(2004). RN [2] {ECO:0000313|EMBL:EED91935.1, ECO:0000313|Proteomes:UP000001449} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=CCMP1335 {ECO:0000313|EMBL:EED91935.1, RC ECO:0000313|Proteomes:UP000001449}; RX PubMed=18923393; DOI=10.1038/nature07410; RA Bowler C., Allen A.E., Badger J.H., Grimwood J., Jabbari K., Kuo A., RA Maheswari U., Martens C., Maumus F., Otillar R.P., Rayko E., RA Salamov A., Vandepoele K., Beszteri B., Gruber A., Heijde M., RA Katinka M., Mock T., Valentin K., Verret F., Berges J.A., Brownlee C., RA Cadoret J.P., Chiovitti A., Choi C.J., Coesel S., De Martino A., RA Detter J.C., Durkin C., Falciatore A., Fournet J., Haruta M., RA Huysman M.J., Jenkins B.D., Jiroutova K., Jorgensen R.E., Joubert Y., RA Kaplan A., Kroger N., Kroth P.G., La Roche J., Lindquist E., RA Lommer M., Martin-Jezequel V., Lopez P.J., Lucas S., Mangogna M., RA McGinnis K., Medlin L.K., Montsant A., Oudot-Le Secq M.P., Napoli C., RA Obornik M., Parker M.S., Petit J.L., Porcel B.M., Poulsen N., RA Robison M., Rychlewski L., Rynearson T.A., Schmutz J., Shapiro H., RA Siaut M., Stanley M., Sussman M.R., Taylor A.R., Vardi A., RA von Dassow P., Vyverman W., Willis A., Wyrwicz L.S., Rokhsar D.S., RA Weissenbach J., Armbrust E.V., Green B.R., Van de Peer Y., RA Grigoriev I.V.; RT "The Phaeodactylum genome reveals the evolutionary history of diatom RT genomes."; RL Nature 456:239-244(2008). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CM000642; EED91935.1; -; Genomic_DNA. DR RefSeq; XP_002290183.1; XM_002290147.1. DR STRING; 35128.Thaps268868; -. DR EnsemblProtists; Thaps268868; Thaps268868; Thaps268868. DR GeneID; 7446424; -. DR KEGG; tps:THAPSDRAFT_268868; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR HOGENOM; HOG000205390; -. DR InParanoid; B8C2D9; -. DR KO; K10844; -. DR Proteomes; UP000001449; Chromosome 5. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 2. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000001449}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000001449}. FT DOMAIN 7 290 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 770 AA; 86049 MW; 04E1D814F4CCFFB2 CRC64; MRFNLEGLDV FFPYDRIYLE QYQYMRALKQ TLDAGGHCLL EMPTGTGKTV CLLSLITSYQ LANPNCGKLV YCTRTVPEMN SVMEELGTVL AYRSEQLGAG SGVLALCLSS RRNMCIHERV LRESDREGID AACRSMTAPW AIEKAQKARQ QQSAQVVETC EYYDGFQSAG EATSMPSGVY DLEELRKWGK NKNWCPYYLT RQAINHASVL VFNYQYMLDP KVAKMVSKEL ESESIIVFDE AHNIDSVCIE ALSVDIHERN LEQATRSLGR LSSEVSRIKA SDGARLQAEY QNLVNGLVDQ GLLDAPAAAV GLSSNVLSPD VINEAVPGNI RRAEHFIAFM KKIVEHLKTR LRAVSGPRGG VISETPLAFL HRMITTTSLE AKPLKFAYSR LSSLLRTLQV PNLDDFNALT DVADFASLVA TYAEGLPRFA IIMEPNGSSI PGALDPVIQL ACLDASLAIA PLFKRFGSVV ITSGTLSPID LYPKLLQFEP CVSESFNMST FRPCIRPLVI TRGSDQLPVS TKFDDRDDMG VVRNYGSMLV ELCSSIPDGV VAFFTSYSYM ESIISEWDGM GILRQLTKSK LVFIETKDVV ETTLALDNYR RACDSGRGAV FLSVARGKVS EGINFDRHYG RAVIMFGVPF QYTLSHILRA RLEYLQTHYQ IREQDFLNFD ALRQASQCVG RVIRSKIDYG LMIFADSRYN RHDKRSKLPK WILQFLGDGQ LNLSTDTAIA QVKHFLRVMA QPVDQNALKE VLLTLDEVQA MSPPTLRLED // ID B8GJG6_METPE Unreviewed; 670 AA. AC B8GJG6; DT 03-MAR-2009, integrated into UniProtKB/TrEMBL. DT 03-MAR-2009, sequence version 1. DT 11-MAY-2016, entry version 43. DE SubName: Full=DEAD_2 domain protein {ECO:0000313|EMBL:ACL17007.1}; GN OrderedLocusNames=Mpal_1699 {ECO:0000313|EMBL:ACL17007.1}; OS Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c). OC Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; OC Methanoregulaceae; Methanosphaerula. OX NCBI_TaxID=521011 {ECO:0000313|EMBL:ACL17007.1, ECO:0000313|Proteomes:UP000002457}; RN [1] {ECO:0000313|EMBL:ACL17007.1, ECO:0000313|Proteomes:UP000002457} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC BAA-1556 / DSM 19958 / E1-9c RC {ECO:0000313|Proteomes:UP000002457}; RG US DOE Joint Genome Institute; RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., RA Tice H., Bruce D., Goodwin L., Pitluck S., Kiss H., Lu M., Brettin T., RA Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., RA Ovchinnikova G.O., Zinder S.; RT "Complete sequence of Candidatus Methanosphaerula E1-9c."; RL Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001338; ACL17007.1; -; Genomic_DNA. DR RefSeq; WP_012618326.1; NC_011832.1. DR STRING; 521011.Mpal_1699; -. DR EnsemblBacteria; ACL17007; ACL17007; Mpal_1699. DR GeneID; 7271262; -. DR KEGG; mpl:Mpal_1699; -. DR eggNOG; arCOG00770; Archaea. DR eggNOG; COG1199; LUCA. DR HOGENOM; HOG000237163; -. DR KO; K10844; -. DR OMA; FAVCGGK; -. DR BioCyc; MPAL521011:GI2F-1744-MONOMER; -. DR Proteomes; UP000002457; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 2. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW Complete proteome {ECO:0000313|Proteomes:UP000002457}; KW Reference proteome {ECO:0000313|Proteomes:UP000002457}. FT DOMAIN 3 301 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 670 AA; 75553 MW; D1DBE3F8D9E35E37 CRC64; MTALDDWFPY SAYRPYQREM LETSAAIAAQ GGIAMIDAPT GSGKSSVIAA LLSESRGRKV IVAVRTVSQL NTFIRELQLI RKKQRSLKFA YLVGKGSMCP LGGEGDVYRR CEGVKAFSSA LMREQAQKGM LNPAKDPQIR NQIRRMDKEH PIICPYYINS RIFVQSEDLS LKMVPSGQLR SRADRIGAEA VAPRQLHELC GDICPYEAML HAARHADVVV LNYYHLFTDE IRDQLYTSLG IESPGDVLLL IDEAHNCGDT VQSIQSVSLD DQSLELASHE LAALRKHLNC VEPVEQVLPQ ISNFMQALKR STEIEDWFDP SIFNRMVIRG SLYRQIEEVV EDLQTITEFV REKNTKAGEY KETAVEQLAD FLYRIYRSSA DPAFLTVFRR LEEERITLEV RNIDPADQLQ TIARAHACCI LISGTLSPVE SYRRYYFGDL PVTTISLPNA FPSKNRLILC STDITTAYSM RQSSGNLAAI DDYIAAFATV KGNIAVYFPS YQLLETFAER CRRKVSGRTL FIEPKDSADA GAALKTFMDL PRHGASGMMF AVCGGKWSEG LDYRGEMLSG ALVIGLPLAP FNKVRKMVID YFRHKFGEEG EFISYTLPAI NRATQALGRV LRTPEDRGVL VLGEKRFWEE RVKSGLSPWM QQEMKPCDAS TFREALKRWR // ID B8I7B6_CLOCE Unreviewed; 790 AA. AC B8I7B6; DT 03-MAR-2009, integrated into UniProtKB/TrEMBL. DT 03-MAR-2009, sequence version 1. DT 11-MAY-2016, entry version 51. DE SubName: Full=DEAD_2 domain protein {ECO:0000313|EMBL:ACL75040.1}; GN OrderedLocusNames=Ccel_0660 {ECO:0000313|EMBL:ACL75040.1}; OS Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / OS H10). OC Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; OC Ruminiclostridium. OX NCBI_TaxID=394503 {ECO:0000313|EMBL:ACL75040.1, ECO:0000313|Proteomes:UP000001349}; RN [1] {ECO:0000313|EMBL:ACL75040.1, ECO:0000313|Proteomes:UP000001349} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 35319 / DSM 5812 / JCM 6584 / H10 RC {ECO:0000313|Proteomes:UP000001349}; RG US DOE Joint Genome Institute; RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., RA Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Saunders E., RA Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., RA Kyrpides N., Ivanova N., Zhou J., Richardson P.; RT "Complete sequence of Clostridium cellulolyticum H10."; RL Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001348; ACL75040.1; -; Genomic_DNA. DR RefSeq; WP_015924209.1; NC_011898.1. DR ProteinModelPortal; B8I7B6; -. DR STRING; 394503.Ccel_0660; -. DR EnsemblBacteria; ACL75040; ACL75040; Ccel_0660. DR KEGG; cce:Ccel_0660; -. DR PATRIC; 19432113; VBICloCel57783_0683. DR eggNOG; ENOG4107QX6; Bacteria. DR eggNOG; COG1199; LUCA. DR HOGENOM; HOG000183657; -. DR OMA; DYNYYFD; -. DR OrthoDB; EOG61P6NQ; -. DR BioCyc; CCEL394503:GJET-681-MONOMER; -. DR Proteomes; UP000001349; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 4. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR001650; Helicase_C. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF00270; DEAD; 1. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. DR PROSITE; PS51194; HELICASE_CTER; 1. PE 4: Predicted; KW Complete proteome {ECO:0000313|Proteomes:UP000001349}; KW Reference proteome {ECO:0000313|Proteomes:UP000001349}. FT DOMAIN 182 440 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT DOMAIN 589 777 Helicase C-terminal. FT {ECO:0000259|PROSITE:PS51194}. SQ SEQUENCE 790 AA; 91398 MW; 644254565948A085 CRC64; MGKPEIKISI RNLVELVLRS GDIDNRLVSS GRMLEGTKIH QKIQKQGGEL YNKEVSLAHN YETQDFIFRL EGRADGIISE PGGVVIDEIK STARPLELID EEFSILHWAQ AKCYAFIYAL QNELQNIYVQ LTYFHIDTEE TKNIRKLFSI KELNEFIEDL LDKYVVWASI SDSWNKQRDD SIKSLQFPFK SYRRGQRELA VAVYKTIMQG KKLFAQAPTG IGKTISTLFP AVKALGEQHI SKIFYLTAKT ITRQVAEEAF SKMRECGLVF RTITLTAKDK ICFNKGGSCN PDFCEYAKGH YNRVNNAMED VLNTSQNLSR EVIEEYALKH KVCPFEFSLD LSLWADCIVC DYNYAFDPRV YLKRFFLNNT GDYAFLVDEA HNLVDRAREM FSAQIHKSAY LEAKKLMKSK VPKVAKILNK INSYMVTLRK QCAEEGFIIS KTELKDLYRL LNNFISESEE WILKNQNNNI EGFEQLLEVY FDSIAFTRMA DFYDERYVTF IETKSMDVRV KLFCLDPSYL LSDAVKRGKT AVFFSATLTP VNYFMDILGG DKEDYNINLA SPFDKDNLCL IVNDNISTRY KSRDKSYDKI VDIIWSSISK RTGNYVVFFP SYKYMNEVYT RFTEQYPETN TIIQETSMTE EERESFLNRF QSGTEKSLVS FGVLGGIFSE GIDLKGDRLI GAIIVGVGLP QVSPEQNIIM DYFKNKNRMG FENAYMYPGM NKVLQAAGRV IRSEHDVGTV ILLDERFSNG NYRRLFPKHW EHVLRVQDTG QLEKRLEQFW IDKDMDKVNT // ID B8M0T2_TALSN Unreviewed; 795 AA. AC B8M0T2; DT 03-MAR-2009, integrated into UniProtKB/TrEMBL. DT 03-MAR-2009, sequence version 1. DT 11-MAY-2016, entry version 42. DE SubName: Full=TFIIH complex helicase Rad3, putative {ECO:0000313|EMBL:EED21465.1}; GN ORFNames=TSTA_086980 {ECO:0000313|EMBL:EED21465.1}; OS Talaromyces stipitatus (strain ATCC 10500 / CBS 375.48 / QM 6759 / OS NRRL 1006) (Penicillium stipitatum). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; OC Eurotiomycetidae; Eurotiales; Trichocomaceae; Talaromyces. OX NCBI_TaxID=441959 {ECO:0000313|EMBL:EED21465.1, ECO:0000313|Proteomes:UP000001745}; RN [1] {ECO:0000313|Proteomes:UP000001745} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 10500 / CBS 375.48 / QM 6759 / NRRL 1006 RC {ECO:0000313|Proteomes:UP000001745}; RX PubMed=25676766; DOI=10.1128/genomeA.01559-14; RA Nierman W.C., Fedorova-Abrams N.D., Andrianopoulos A.; RT "Genome sequence of the AIDS-associated pathogen Penicillium marneffei RT (ATCC18224) and its near taxonomic relative Talaromyces stipitatus RT (ATCC10500)."; RL Genome Announc. 3:E0155914-E0155914(2015). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; EQ962653; EED21465.1; -; Genomic_DNA. DR RefSeq; XP_002478428.1; XM_002478383.1. DR STRING; 441959.XP_002478428.1; -. DR EnsemblFungi; EED21465; EED21465; TSTA_086980. DR GeneID; 8110104; -. DR EuPathDB; FungiDB:TSTA_086980; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; B8M0T2; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000001745; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 2. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EED21465.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000001745}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EED21465.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EED21465.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EED21465.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000001745}. FT DOMAIN 7 283 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 248 275 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 795 AA; 90720 MW; 20E06CF1CD05E1B9 CRC64; MRFKIDEIEV LFPYPKIYPE QWQYMCDLKK ALDAGGHCVL EMPSGTGKTV TLLSLIVAYQ QHHGDSRKLI YCSRTMSEID KALHELKALM KYRALELGHT EDFRGLGLSS RKNLCLHPSV KREKSGTVVD ARCRSLTASF VAQKKERGED VETCTYHDNL DLLEPHNLIE PGVFTFSDLL RYCQEKVTCP YFTVRRMLPY CNVIIYSYHY LLDPKIAERV SRELSKDCIV VFDEAHNIDN VAIESLSIDL TEDSLRKASR GAKNLERKIE EMKTSDAEKL QSEYTKLVEG LKATEEARDE DLIMSNPVLP QDLLSEAVPG NIRRAEHFIA FLQRFIQYLM TRMKVTHTIS ETTPSFLQHL RELVFIEAKP LKFCSERLTS LVRTLELMNI EDYQPLQEVA MFATLVSTYD RGFLLILEPF ESEAATVPNP VLHLACLDAA IAFRPVCERF SSIVVTSGTL TPLDMFPKML NFTPVLQESY TMTLARRSFL PMIVTRGSDQ SQISSSFQTR NDPSNLRNYG TLLLDFAKIV PDGIVVFFPS YLYMESTLHV WSGMGILDMI WNYKLILVET PDAQESSLAL ETYRTACCNG RGAILMSVAR GKVAEGVDFD HQYGRAVICI GVPFQYTESR ILRARLEFLR ENYGIRENDF LSFDAMRHAS QCLGRVIRGK DDYGIMVLAD KRFARKRNQL PKWINQTILE SEVNLSTDMA VATAKNFLRT MAQPFKAKDH EGISSWTPAQ LDEQIAKRKM EEERVERGLE PVAPPRNGSH GADGPQPDKD EFDDDLDEEM MMLDT // ID B8N4P3_ASPFN Unreviewed; 794 AA. AC B8N4P3; DT 03-MAR-2009, integrated into UniProtKB/TrEMBL. DT 03-MAR-2009, sequence version 1. DT 11-MAY-2016, entry version 48. DE SubName: Full=TFIIH complex helicase Rad3, putative {ECO:0000313|EMBL:EED54500.1}; GN ORFNames=AFLA_017520 {ECO:0000313|EMBL:EED54500.1}; OS Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM OS 12722 / SRRC 167). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; OC Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus. OX NCBI_TaxID=332952 {ECO:0000313|EMBL:EED54500.1, ECO:0000313|Proteomes:UP000001875}; RN [1] {ECO:0000313|EMBL:EED54500.1, ECO:0000313|Proteomes:UP000001875} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167 RC {ECO:0000313|Proteomes:UP000001875}; RX PubMed=25883274; DOI=10.1128/genomeA.00168-15; RA Nierman W.C., Yu J., Fedorova-Abrams N.D., Losada L., Cleveland T.E., RA Bhatnagar D., Bennett J.W., Dean R., Payne G.A.; RT "Genome sequence of Aspergillus flavus NRRL 3357, a strain that causes RT aflatoxin contamination of food and feed."; RL Genome Announc. 3:E0016815-E0016815(2015). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; EQ963474; EED54500.1; -; Genomic_DNA. DR RefSeq; XP_002375772.1; XM_002375731.1. DR EnsemblFungi; CADAFLAT00003637; CADAFLAP00003637; CADAFLAG00003637. DR GeneID; 7918850; -. DR KEGG; afv:AFLA_017520; -. DR EuPathDB; FungiDB:AFLA_017520; -. DR HOGENOM; HOG000205390; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000001875; Unassembled WGS sequence. DR GO; GO:0000439; C:core TFIIH complex; IEA:EnsemblFungi. DR GO; GO:0005829; C:cytosol; IEA:EnsemblFungi. DR GO; GO:0005675; C:holo TFIIH complex; IEA:EnsemblFungi. DR GO; GO:0000112; C:nucleotide-excision repair factor 3 complex; IEA:EnsemblFungi. DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:EnsemblFungi. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0043141; F:ATP-dependent 5'-3' DNA helicase activity; IEA:EnsemblFungi. DR GO; GO:0003684; F:damaged DNA binding; IEA:EnsemblFungi. DR GO; GO:0000717; P:nucleotide-excision repair, DNA duplex unwinding; IEA:EnsemblFungi. DR GO; GO:0033683; P:nucleotide-excision repair, DNA incision; IEA:EnsemblFungi. DR GO; GO:0070816; P:phosphorylation of RNA polymerase II C-terminal domain; IEA:EnsemblFungi. DR GO; GO:0045951; P:positive regulation of mitotic recombination; IEA:EnsemblFungi. DR GO; GO:0010525; P:regulation of transposition, RNA-mediated; IEA:EnsemblFungi. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:EnsemblFungi. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EED54500.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000001875}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EED54500.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EED54500.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EED54500.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000001875}. FT DOMAIN 7 283 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 248 275 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 794 AA; 90483 MW; E778B870DADC2AB3 CRC64; MKFFIDDLPV LFPYPRIYPE QYAYMCDLKK TLDAGGHCVL EMPSGTGKTV SLLSLIVAYQ MHYPEHRKLI YCSRTMSEIE KALAELKALM KFRTQQLGYT EDFRALGLTS RKNLCLHPSV KREKSGTIVD ARCRSLTAGF VKEKKERGED VELCVYHENL DLLEPHNLVP PGVFTLDGLL KYGEDHKQCP YFSARRMMPF CNVIIYSYHY LLDPKIAERV SREFSKDCIV VFDEAHNIDN VCIESLSIDI TEDSLRKATR GANNLERKIN EMKSSDAEKL QSEYSKLVEG LREAEQAREE DQFISNPVLP DDLLKEAVPG NIRRAEHFIS FLKRFIEYLK TRMKVTHTIS ETPPSFLTHV KDLTYIERKP LRFCAERLTS LVRTLELINI EDYQPLQEVA TFATLVSTYD KGFLLILEPF ESEAATVPNP VLHFTCLDAA IAIKPVFERF SSVIITSGTL SPLEMYPKML GFTTVMQESY SMTLARRSFL PMVVTRGSDQ AQISSSFQIR NDPGVVRNYG NIVLEFSRIT PDGIVVFFPS YLYMESIISM WQGMGILDSI WNYKLILVET PDAQESSLAL ETYRTACCNG RGAILMCVAR GKVSEGIDFD HHYGRAVICI GVPFQYTESR ILKARLEFLR ENYRIRENDF LSFDAMRHAA QCLGRVLRGK DDYGVMVLAD KRFQKKRTQL PKWISQAMLE SETNLSTDMA VATAKNFLRG MAQPFKAKDQ DGISTWSLAD LERHREKQML EEERARRQAL ANGHGANGVA NGAAAAADEF DDDIDDDLMM LDAQ // ID B9GSP7_POPTR Unreviewed; 758 AA. AC B9GSP7; DT 24-MAR-2009, integrated into UniProtKB/TrEMBL. DT 24-MAR-2009, sequence version 1. DT 11-MAY-2016, entry version 57. DE SubName: Full=ULTRAVIOLET HYPERSENSITIVE 6 family protein {ECO:0000313|EMBL:EEE80125.1}; GN ORFNames=POPTR_0002s05500g {ECO:0000313|EMBL:EEE80125.1}; OS Populus trichocarpa (Western balsam poplar) (Populus balsamifera OS subsp. trichocarpa). OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; OC Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; OC Populus. OX NCBI_TaxID=3694 {ECO:0000313|EMBL:EEE80125.1, ECO:0000313|Proteomes:UP000006729}; RN [1] {ECO:0000313|EMBL:EEE80125.1, ECO:0000313|Proteomes:UP000006729} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=cv. Nisqually {ECO:0000313|Proteomes:UP000006729}; RX PubMed=16973872; DOI=10.1126/science.1128691; RA Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., RA Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., RA Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., RA Boerjan W., Brun A., Brunner A., Busov V., Campbell M., Carlson J., RA Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., RA Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., RA Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., RA Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., RA Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., RA Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., RA Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., RA Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., RA Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., RA Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., RA Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., RA Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., RA Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., RA Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., RA Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., RA Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., RA Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S.; RT "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)."; RL Science 313:1596-1604(2006). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CM000338; EEE80125.1; -; Genomic_DNA. DR RefSeq; XP_002300852.1; XM_002300816.2. DR STRING; 3694.POPTR_0002s05500.1; -. DR EnsemblPlants; POPTR_0002s05500.1; POPTR_0002s05500.1; POPTR_0002s05500. DR GeneID; 7480701; -. DR Gramene; POPTR_0002s05500.1; POPTR_0002s05500.1; POPTR_0002s05500. DR KEGG; pop:POPTR_0002s05500g; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR HOGENOM; HOG000205390; -. DR InParanoid; B9GSP7; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR Proteomes; UP000006729; Linkage group LGII. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0000724; P:double-strand break repair via homologous recombination; IEA:EnsemblPlants. DR GO; GO:0010286; P:heat acclimation; IEA:EnsemblPlants. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR GO; GO:0045893; P:positive regulation of transcription, DNA-templated; IEA:EnsemblPlants. DR GO; GO:0043687; P:post-translational protein modification; IEA:EnsemblPlants. DR GO; GO:0006457; P:protein folding; IEA:EnsemblPlants. DR GO; GO:0009644; P:response to high light intensity; IEA:EnsemblPlants. DR GO; GO:0042542; P:response to hydrogen peroxide; IEA:EnsemblPlants. DR GO; GO:0010212; P:response to ionizing radiation; IEA:EnsemblPlants. DR GO; GO:0009411; P:response to UV; IEA:EnsemblPlants. DR GO; GO:0000394; P:RNA splicing, via endonucleolytic cleavage and ligation; IEA:EnsemblPlants. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:EnsemblPlants. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000006729}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000006729}. FT DOMAIN 7 285 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 758 AA; 85996 MW; D604E0F0D8535331 CRC64; MKFQIEDVTV YFPYDHIYPE QYSYMVELKR ALDAKGHCLL EMPTGTGKTI ALLSLITSYT ISKPQGAIKL IYCTRTVHEM EKTLAELKLL HNYQVKHLGP AAKILAIGLS SRKNLCVNPN VLEANNRDSV DAACRKRTAS WVRALAAENP NVETCEFFEN YERAASGAVL PPGVYTLQDL RAYGKEKGWC PYFLARHMVQ LANVVVYSYQ YLLDPKVAGI ISKEMQKESV VVFDEAHNID NVCIEALSVS VRRQTLDGAS RNISRIEQEI NRFKATDANR LRDEYKRLVN GLALSGNLPG SDSWLSNPAL PDDILREAVP GNIRRAEHFL HVLRRLLQYL TVRLDTENVE KESPISFVAS INNQAGIDQK TLKFCYDRLH SLMLTLEITD TDEFLHVQTI CDFATLVGTY SRGFSIIIEP FDERMPHIPD PVLQLSCHDA SLAIKPVFDR FQSVVITSGT LSPIDLYPRL LNFHPVVSRS FKMSLTRDCI CPMVLTRGSD QLPVSTKFDM RSDPGVVRNY GKLLVEMVSI VPDGIVCFFV SYSYMDGIIN TWNESGLLKE IMQHKLVFIE TQDVVETTLA LDNYRRACDC GRGAVFFSVA RGKVAEGIDF DRHYGRLVIM FGVPFQYTLS KILLARLEYL RDTFQIKEGD FLTFDALRQA AQCVGRVIRS KADYGMMIFA DKRYSRHDKR SKLPGWILSH LRDAHLNLST DMALHIAREF LRKMAQPYDK TGSSGKKTLL SQEDLEKMDD SGKQAMLY // ID B9S438_RICCO Unreviewed; 758 AA. AC B9S438; DT 24-MAR-2009, integrated into UniProtKB/TrEMBL. DT 24-MAR-2009, sequence version 1. DT 11-MAY-2016, entry version 40. DE SubName: Full=DNA repair helicase rad3/xp-d, putative {ECO:0000313|EMBL:EEF41719.1}; GN ORFNames=RCOM_0558550 {ECO:0000313|EMBL:EEF41719.1}; OS Ricinus communis (Castor bean). OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; OC Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; OC Acalyphoideae; Acalypheae; Ricinus. OX NCBI_TaxID=3988 {ECO:0000313|Proteomes:UP000008311}; RN [1] {ECO:0000313|Proteomes:UP000008311} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=cv. Hale {ECO:0000313|Proteomes:UP000008311}; RX PubMed=20729833; DOI=10.1038/nbt.1674; RA Chan A.P., Crabtree J., Zhao Q., Lorenzi H., Orvis J., Puiu D., RA Melake-Berhan A., Jones K.M., Redman J., Chen G., Cahoon E.B., RA Gedil M., Stanke M., Haas B.J., Wortman J.R., Fraser-Liggett C.M., RA Ravel J., Rabinowicz P.D.; RT "Draft genome sequence of the oilseed species Ricinus communis."; RL Nat. Biotechnol. 28:951-956(2010). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; EQ973863; EEF41719.1; -; Genomic_DNA. DR RefSeq; XP_002520757.1; XM_002520711.2. DR GeneID; 8272056; -. DR KEGG; rcu:RCOM_0558550; -. DR InParanoid; B9S438; -. DR KO; K10844; -. DR Proteomes; UP000008311; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EEF41719.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000008311}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EEF41719.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EEF41719.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EEF41719.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000008311}. FT DOMAIN 7 285 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 758 AA; 85976 MW; 9D4043FD7B912B98 CRC64; MKFQIEDVTV YFPYDNIYPE QYSYMIELKR ALDAKGHCLL EMPTGTGKTI ALLSLITSYS LSKPQSPVKL IYCTRTVHEM EKTLAELKLL HNYQIKHLGP AARILAIGLS SRKNLCVNPR VLAAENRDSV DAGCRKLTAS WMRAMAAENP NIPTCEFFEN YERAASAAVL PPGVYTLQDL RTYGKEKGWC PYFLARHMVQ FANVVVYSYQ YLLDPKVAGI ISKEMQKESV VVFDEAHNID NVCIEALSVS VRKQTLEGAS RNLSRINQEI ERFKATDAGR LRAEYNRLVE GLAQRGNLAV TDTWLSNPAL PDDILKEAVP GNIRRAEHFL HVLRRLVQYL KGRLDTENVE KESPVSFVAS LNSQAGIDQK TLKFCYDRLH SLMLTLEITD TDEFLHVQTI CDFATLVGTY SRGFSIIIEP FDERMPHIPD PVLQLSCHDA SLAIKPVFDR FQSVVITSGT LSPIDLYPRL LNFHPVVSRS FTMSLTRDCI CPMVLTRGSD QLPVSTKFDM RSDPGVARNY GKLLVEMVSV VPDGIVCFFV SYSYMDGIIN SWNETGILKE IMQHKLVFIE TQDVVETTLA LDNYRRACDC GRGAVFFSVA RGKVAEGIDF DRHYGRLVIM FGIPFQYTLS KILLARLEYL RDTFQIKEGD FLTFDALRQA AQCVGRVIRS KADYGMMIFA DKRYSRHDKR SKLPGWILSH LRDANLNLST DMALHIAREF LRKMAQPYDK TGASGRKTLL SQEDLEKMAE SGMQDMLY // ID C0NL48_AJECG Unreviewed; 797 AA. AC C0NL48; DT 05-MAY-2009, integrated into UniProtKB/TrEMBL. DT 05-MAY-2009, sequence version 1. DT 11-MAY-2016, entry version 39. DE SubName: Full=DNA repair helicase RAD3 {ECO:0000313|EMBL:EEH08589.1}; GN ORFNames=HCBG_03878 {ECO:0000313|EMBL:EEH08589.1}; OS Ajellomyces capsulatus (strain G186AR / H82 / ATCC MYA-2454 / RMSCC OS 2432) (Darling's disease fungus) (Histoplasma capsulatum). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; OC Eurotiomycetidae; Onygenales; Ajellomycetaceae; Histoplasma. OX NCBI_TaxID=447093 {ECO:0000313|EMBL:EEH08589.1, ECO:0000313|Proteomes:UP000001631}; RN [1] {ECO:0000313|Proteomes:UP000001631} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=G186AR / H82 / ATCC MYA-2454 / RMSCC 2432 RC {ECO:0000313|Proteomes:UP000001631}; RA Champion M., Cuomo C.A., Ma L.-J., Henn M.R., Sil A., Goldman B., RA Young S.K., Kodira C.D., Zeng Q., Koehrsen M., Alvarado L., Berlin A., RA Borenstein D., Chen Z., Engels R., Freedman E., Gellesch M., RA Goldberg J., Griggs A., Gujja S., Heiman D., Hepburn T., Howarth C., RA Jen D., Larson L., Lewis B., Mehta T., Park D., Pearson M., RA Roberts A., Saif S., Shea T., Shenoy N., Sisk P., Stolte C., Sykes S., RA Walk T., White J., Yandava C., Klein B., McEwen J.G., Puccia R., RA Goldman G.H., Felipe M.S., Nino-Vega G., San-Blas G., Taylor J., RA Mendoza L., Galagan J.E., Nusbaum C., Birren B.W.; RT "The genome sequence of Ajellomyces capsulatus strain G186AR."; RL Submitted (FEB-2009) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GG663366; EEH08589.1; -; Genomic_DNA. DR EnsemblFungi; EEH08589; EEH08589; HCBG_03878. DR InParanoid; C0NL48; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000001631; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EEH08589.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000001631}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EEH08589.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EEH08589.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EEH08589.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000001631}. FT DOMAIN 7 287 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 248 300 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 797 AA; 91082 MW; 9339CB1134165779 CRC64; MKFFIDDLPV LFPYPRIYPE QYAYMCDLKK TLDAGGHCVL EMPSGTGKTV SLLSLIVAYQ QHQPEQRKLI YCSRTMSEIE KALAELKALM KYRAQQLGFV EDFRGLGLTS RKNLCLHPSV KREKSGAVVD ARCRSLTAGF VKEKKEKGGD VELCIYHENL DLLEPSNLVP PGVFTLDDIT KYGEQHKQCP YFSVRRMMPF CKVIIYSYHY LLDPKIAERV SQELSKDSIV VFDEAHNIDN VCIESLSIDL TEDSLRKASR GANNLERKIE EMKRSDAEKL QNEYQKLVEG LREADEARQE EQLMANPALP DDLLKEAVPG NIRRAEHFVA FLKRFIEYLK TRMKITHTIS ETPLSFLAHL KDLTSIERKP LRFCAERLTS LVRTLELMNL EDYQPLQQVA AFATLAATYE KGFLLILEPF ESETATVPNP ILHFTCLDAA IAIKPVFDRF SSVIVTSGTL SPLEMYPKML KFTTVLQESY TMTLARRSFL PMVVTRGSDQ AQISSSFQIR NDPGVVRNYG NLLLEFSRIT PDGVVVFFPS YLYMESIISM WQGMGILDLV WNYKLILVET PDSQESSLAL ETYRTACCNG RGAVLLCVAR GKVSEGIDFD HHYGRAVICI GVPFQYTESR ILKARLEFLR ENYRIRENDF LSFDAMRHAA QCLGRVIRGK DDYGVMVLAD RRFQKRRTQL PKWISQAMLE SETNLSTDMA VATAKSFLKT MAQPFKSKDQ EGISTWSLTD LEYHVKKQRE EEDKRQRGEI ANNQVPSDVV NGNRNGRVTT VDEFDENIDQ ELMMLDA // ID C1DZL6_MICSR Unreviewed; 797 AA. AC C1DZL6; DT 26-MAY-2009, integrated into UniProtKB/TrEMBL. DT 26-MAY-2009, sequence version 1. DT 11-MAY-2016, entry version 40. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ACO61140.1}; GN ORFNames=MICPUN_56496 {ECO:0000313|EMBL:ACO61140.1}; OS Micromonas sp. (strain RCC299 / NOUM17) (Picoplanktonic green alga). OC Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; OC Mamiellales; Mamiellaceae; Micromonas. OX NCBI_TaxID=296587 {ECO:0000313|EMBL:ACO61140.1, ECO:0000313|Proteomes:UP000002009}; RN [1] {ECO:0000313|EMBL:ACO61140.1, ECO:0000313|Proteomes:UP000002009} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=RCC299 / NOUM17 {ECO:0000313|Proteomes:UP000002009}; RX PubMed=19359590; DOI=10.1126/science.1167222; RA Worden A.Z., Lee J.H., Mock T., Rouze P., Simmons M.P., Aerts A.L., RA Allen A.E., Cuvelier M.L., Derelle E., Everett M.V., Foulon E., RA Grimwood J., Gundlach H., Henrissat B., Napoli C., McDonald S.M., RA Parker M.S., Rombauts S., Salamov A., Von Dassow P., Badger J.H., RA Coutinho P.M., Demir E., Dubchak I., Gentemann C., Eikrem W., RA Gready J.E., John U., Lanier W., Lindquist E.A., Lucas S., Mayer K.F., RA Moreau H., Not F., Otillar R., Panaud O., Pangilinan J., Paulsen I., RA Piegu B., Poliakov A., Robbens S., Schmutz J., Toulza E., Wyss T., RA Zelensky A., Zhou K., Armbrust E.V., Bhattacharya D., Goodenough U.W., RA Van de Peer Y., Grigoriev I.V.; RT "Green evolution and dynamic adaptations revealed by genomes of the RT marine picoeukaryotes Micromonas."; RL Science 324:268-272(2009). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001323; ACO61140.1; -; Genomic_DNA. DR RefSeq; XP_002499882.1; XM_002499836.1. DR GeneID; 8240609; -. DR KEGG; mis:MICPUN_56496; -. DR InParanoid; C1DZL6; -. DR KO; K10844; -. DR Proteomes; UP000002009; Chromosome 2. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR006935; Helicase/UvrB_N. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR Pfam; PF04851; ResIII; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000002009}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000002009}. FT DOMAIN 7 292 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 797 AA; 89769 MW; F1F3035F6022030B CRC64; MIFNLEGLTV YFPYEYLYPE QYRYMLELKR ALDAKGHGCL EMPTGTGKTI TCLSLITSYQ LQNPECGKLI YCTRTVPEME KVLAELRNLQ AYREKHVGKA SQIMALGLSS RKNMCIHPKV ADEGSRESVD ANCRRLTASW VRDKHMAALA NEEEAPENAP ELCEFFEDYE KEGPNAILPP GVYTLADLRD FGRKKGWCPY FLARHMISFA NVVVYNYQYL LDPKVANMVS RELERECVVV FDEAHNIDNV CIEALSVNLR QQTLDGASRN IAQLTQRIEH VKAHDEQRLR EEYTRLVNGL AQQGVLDRAR SDQLIANPVI SEDILREAVP GNIRRAEHFI AFLRRFVEYL KQRMRGGSVE QETPIAFLAH LQQTAAIDGK TLKFCYDRIT SLLKTLEVVD TEDFSAISLI CDFATLVGTY EKGFALILEP YDERYPNIPD PVFQLTCLDA SYAIAPVFDK FNSVFITSGT LSPINLYPQL LGFKPVCSAA LDMTLTRECL CPMVITRGAD QQMVSTKFDM RDDPGVIQNY GRVLIDLCSC VPDGIVAFFV SYSYMEQIIS KWHETGVLQQ VMRRKLVFLE TQDVVETSLA LDNYRRACNC GRGAVFLSVA RGKIAEGIDF DRHYGRAVIM YGVPYQYTLS RILRARLEYL RETFQIKEAD FLSFDAVRQA AQCVGRVIRS KADYGLMVFC DKRYNSHDKR GKLPKWITSH LHEQQLNLST DMAVAIARQF MRDMAQPYDR AGQMGKSLLD QNSVNAMAAA AGFGPPTIGP PPPKPMGGPM GGPMGGPMGG AGPMTIG // ID C1FYI3_PARBD Unreviewed; 797 AA. AC C1FYI3; DT 26-MAY-2009, integrated into UniProtKB/TrEMBL. DT 07-JAN-2015, sequence version 2. DT 11-MAY-2016, entry version 37. DE SubName: Full=DNA repair helicase rad15 {ECO:0000313|EMBL:EEH44570.2}; GN ORFNames=PADG_00859 {ECO:0000313|EMBL:EEH44570.2}; OS Paracoccidioides brasiliensis (strain Pb18). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; OC Eurotiomycetidae; Onygenales; Onygenales incertae sedis; OC Paracoccidioides. OX NCBI_TaxID=502780 {ECO:0000313|EMBL:EEH44570.2, ECO:0000313|Proteomes:UP000001628}; RN [1] {ECO:0000313|EMBL:EEH44570.2, ECO:0000313|Proteomes:UP000001628} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Pb18 {ECO:0000313|EMBL:EEH44570.2, RC ECO:0000313|Proteomes:UP000001628}; RX PubMed=22046142; DOI=10.1371/journal.pgen.1002345; RA Desjardins C.A., Champion M.D., Holder J.W., Muszewska A., RA Goldberg J., Bailao A.M., Brigido M.M., Ferreira M.E., Garcia A.M., RA Grynberg M., Gujja S., Heiman D.I., Henn M.R., Kodira C.D., RA Leon-Narvaez H., Longo L.V.G., Ma L.-J., Malavazi I., Matsuo A.L., RA Morais F.V., Pereira M., Rodriguez-Brito S., Sakthikumar S., RA Salem-Izacc S.M., Sykes S.M., Teixeira M.M., Vallejo M.C., RA Walter M.E., Yandava C., Young S., Zeng Q., Zucker J., Felipe M.S., RA Goldman G.H., Haas B.J., McEwen J.G., Nino-Vega G., Puccia R., RA San-Blas G., Soares C.M., Birren B.W., Cuomo C.A.; RT "Comparative genomic analysis of human fungal pathogens causing RT paracoccidioidomycosis."; RL PLoS Genet. 7:E1002345-E1002345(2011). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; KN275957; EEH44570.2; -; Genomic_DNA. DR RefSeq; XP_010756011.1; XM_010757709.1. DR EnsemblFungi; EEH44570; EEH44570; PADG_00859. DR GeneID; 22580633; -. DR KEGG; pbn:PADG_00859; -. DR KO; K10844; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000001628; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EEH44570.2}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000001628}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EEH44570.2}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EEH44570.2}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EEH44570.2}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000001628}. FT DOMAIN 7 287 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 248 275 {ECO:0000256|SAM:Coils}. FT COILED 277 300 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 797 AA; 91261 MW; F3BD03C9F2403730 CRC64; MKFFIDDLPV LFPYPRIYPE QYAYMCDLKK TLDTGGHCVL EMPSGTGKTV SLLSLIIAYQ QHKPEQRKLI YCSRTMSEIE KALAELKALM KYRAQQLGYT EDFRGLGLTS RKNLCLHPSV KREKSGTIVD ARCRSLTAGF VKEKKERGED VELCIYHENL DLLEPSNLVP PGVFTLDDMI KYGEQHKQCP YFSVRRMMPF CNVIIYSYHY LLDPKIAERV SQELSKDSIV VFDEAHNIDN VCIESLSIDL TEDSLRKASR GANNLERRID EMKSSDAEKL QNEYQKLVEG LREADEARQE EQLMANPALP DDLLKEAVPG NIRRAEHFVA FLKRFIEYLK TRMKVTHTIS ETPPSFLAHL KDLTFIERKP LRFCAERLTS LVRTLELMNL EDYQPLQQVA AFATLAATYE KGFLLILEPF ESDTATVPNP ILHFTCLDAA IAIKPVFDRF SSVIITSGTL SPLEMYPKML GFTTVLQESY SMTLARRSFL PMIVTRGSDQ AQISSSFQIR NDPGVVRNYG NLLLEFSRIT PDGIVVFFPS YLYMESIISM WQGMGILDSI WNYKLILVET PDSQESSLAL ETYRTACCNG RGAILLCVAR GKVSEGIDFD HHYGRTVICI GVPFQYTESR ILKARLEFLR ENYRIRENDF LSFDAMRHAA QCLGRVLRGK DDYGVMVLAD RRFQKKRAQL PKWISQAMLE SETNLSTDMA MATAKSFLRT MAQPFKSKDQ EGISTWSIAD LERHVKKQRE EESKRYSEAI ANNLEEVTNG NQNRNGRVIA MDEFDENVDE ELMMLDA // ID C1GUK1_PARBA Unreviewed; 797 AA. AC C1GUK1; DT 26-MAY-2009, integrated into UniProtKB/TrEMBL. DT 26-MAY-2009, sequence version 1. DT 11-MAY-2016, entry version 42. DE SubName: Full=DNA repair helicase RAD3 {ECO:0000313|EMBL:EEH40007.1}; GN ORFNames=PAAG_02196 {ECO:0000313|EMBL:EEH40007.1}; OS Paracoccidioides lutzii (strain ATCC MYA-826 / Pb01) (Paracoccidioides OS brasiliensis). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; OC Eurotiomycetidae; Onygenales; Onygenales incertae sedis; OC Paracoccidioides. OX NCBI_TaxID=502779 {ECO:0000313|EMBL:EEH40007.1, ECO:0000313|Proteomes:UP000002059}; RN [1] {ECO:0000313|EMBL:EEH40007.1, ECO:0000313|Proteomes:UP000002059} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC MYA-826 / Pb01 {ECO:0000313|Proteomes:UP000002059}; RX PubMed=22046142; DOI=10.1371/journal.pgen.1002345; RA Desjardins C.A., Champion M.D., Holder J.W., Muszewska A., RA Goldberg J., Bailao A.M., Brigido M.M., Ferreira M.E., Garcia A.M., RA Grynberg M., Gujja S., Heiman D.I., Henn M.R., Kodira C.D., RA Leon-Narvaez H., Longo L.V.G., Ma L.-J., Malavazi I., Matsuo A.L., RA Morais F.V., Pereira M., Rodriguez-Brito S., Sakthikumar S., RA Salem-Izacc S.M., Sykes S.M., Teixeira M.M., Vallejo M.C., RA Walter M.E., Yandava C., Young S., Zeng Q., Zucker J., Felipe M.S., RA Goldman G.H., Haas B.J., McEwen J.G., Nino-Vega G., Puccia R., RA San-Blas G., Soares C.M., Birren B.W., Cuomo C.A.; RT "Comparative genomic analysis of human fungal pathogens causing RT paracoccidioidomycosis."; RL PLoS Genet. 7:E1002345-E1002345(2011). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; KN293995; EEH40007.1; -; Genomic_DNA. DR RefSeq; XP_002796308.1; XM_002796262.1. DR STRING; 502779.XP_002796308.1; -. DR EnsemblFungi; EEH40007; EEH40007; PAAG_02196. DR GeneID; 9099453; -. DR KEGG; pbl:PAAG_02196; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR KO; K10844; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000002059; Partially assembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EEH40007.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000002059}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EEH40007.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EEH40007.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EEH40007.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000002059}. FT DOMAIN 7 287 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 248 275 {ECO:0000256|SAM:Coils}. FT COILED 277 300 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 797 AA; 91315 MW; 7C56D57B09F79E78 CRC64; MKFFIDDLPV LFPYPRIYPE QYAYMCDLKK TLDAGGHCVL EMPSGTGKTV SLLSLIIAYQ QHKPEQRKLI YCSRTMSEIE KALAELKALM KYRAQQLGYT EDFRGLGLTS RKNLCLHPSV KREKSGTIVD ARCRSMTAGF VKEKKERGED VELCIYHENL DLLEPSNLVP PGVFTLDDML KYGEQHKQCP YFSVRRMMPF CNVIIYSYHY LLDPKIAERV SQELSKDSIV VFDEAHNIDN VCIESLSIDL TEDSLRKASR GANNLERRID EMKSLDAEKL QNEYQKLVEG LREADEARQE EQLMANPALP DDLLKEAVPG NIRRAEHFVA FLKRFIEYLK TRMKVTHTIS ETPPSFLAHL KDLTFIERKP LRFCAERLTS LVRTLELMNL EDYQPLQQVA AFATLAATYE KGFLLILEPF ESDTATVPNP ILHFTCLDAA IAIKPVFDRF SSVIITSGTL SPLEMYPKML GFTTVLQESY SMTLARRSFL PMIVTRGSDQ AQISSSFQIR NDPGVVRNYG NLLLEFSRIT PDGIVVFFPS YLYMESIISM WQGMGILDSI WNYKLILVET PDSQESSLAL ETYRTACCNG RGAILLCVAR GKVSEGIDFD HHYGRTVICI GVPFQYTESR ILKARLEFLR ENYRIRENDF LSFDAMRHAA QCLGRVLRGK DDYGVMVLAD RRFQKKRAQL PKWISQAMLE SETNLSTDMA MATAKSFLRT MAQPFKSKDQ EGISTWSIAD LERYVKKQRE EESKRYSEAI ANNLEEVTNG NQNRNGRVIA MDEFDENIDE ELMMLDA // ID C1MJ87_MICPC Unreviewed; 741 AA. AC C1MJ87; DT 26-MAY-2009, integrated into UniProtKB/TrEMBL. DT 26-MAY-2009, sequence version 1. DT 11-MAY-2016, entry version 38. DE SubName: Full=Predicted protein {ECO:0000313|EMBL:EEH60522.1}; GN ORFNames=MICPUCDRAFT_45209 {ECO:0000313|EMBL:EEH60522.1}; OS Micromonas pusilla (strain CCMP1545) (Picoplanktonic green alga). OC Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; OC Mamiellales; Mamiellaceae; Micromonas. OX NCBI_TaxID=564608 {ECO:0000313|Proteomes:UP000001876}; RN [1] {ECO:0000313|EMBL:EEH60522.1, ECO:0000313|Proteomes:UP000001876} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=CCMP1545 {ECO:0000313|EMBL:EEH60522.1, RC ECO:0000313|Proteomes:UP000001876}; RX PubMed=19359590; DOI=10.1126/science.1167222; RA Worden A.Z., Lee J.H., Mock T., Rouze P., Simmons M.P., Aerts A.L., RA Allen A.E., Cuvelier M.L., Derelle E., Everett M.V., Foulon E., RA Grimwood J., Gundlach H., Henrissat B., Napoli C., McDonald S.M., RA Parker M.S., Rombauts S., Salamov A., Von Dassow P., Badger J.H., RA Coutinho P.M., Demir E., Dubchak I., Gentemann C., Eikrem W., RA Gready J.E., John U., Lanier W., Lindquist E.A., Lucas S., Mayer K.F., RA Moreau H., Not F., Otillar R., Panaud O., Pangilinan J., Paulsen I., RA Piegu B., Poliakov A., Robbens S., Schmutz J., Toulza E., Wyss T., RA Zelensky A., Zhou K., Armbrust E.V., Bhattacharya D., Goodenough U.W., RA Van de Peer Y., Grigoriev I.V.; RT "Green evolution and dynamic adaptations revealed by genomes of the RT marine picoeukaryotes Micromonas."; RL Science 324:268-272(2009). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GG663735; EEH60522.1; -; Genomic_DNA. DR RefSeq; XP_003055270.1; XM_003055224.1. DR GeneID; 9680461; -. DR KEGG; mpp:MICPUCDRAFT_45209; -. DR KO; K10844; -. DR Proteomes; UP000001876; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR006935; Helicase/UvrB_N. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR Pfam; PF04851; ResIII; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 3. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000001876}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000001876}. FT DOMAIN 7 288 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 741 AA; 83657 MW; 300F632C9790D437 CRC64; MIFNLEGLTV YFPYEYLYPE QYKYMQELKR GLDAKGHGCL EMPTGTGKTI TCLALITSYQ LAHPECGKLI YCTRTVPEME KVLAELRVLQ AYREKHVGEA AAMLALGLSS RKNMCVHPRV AEEGSRESVD ARCRQLTASW VREKHNSALA SGEEPTTELC QFFEDYEREG PDAVLPPGVY TLADLRQFGR TKGWCPYFTA RHMIKCSNVI VYNYQYLLDP KVSSLVSREL EKECVVVFDE AHNIDNVCIE ALSVNLRQQT LDVAGRNITA LSAKIERAKQ TDERRLRAEY DALVNGLANQ GVLPRGGGED AIANPVIPAD ILREAVPGNI RRAEHFVAFM RRLVEYLKQR LKATQVEQET PMAFLAHLSQ TAAIDGKTLK FCHDRLTSLL KTLEIVDTEE FNAVSLVADF GTLVGTYEKG FALILEPYDE RYPNIPDPVL QLSCLDASLA IAPVFERFDN VFITSGTLSP IDLYPKLLSF NPVACISLPM TLTRDCLCPI VITRGADQQA VSTKFDMRDD PGVIQNYGRI LIDMAASVPD GLVAFFVSYS YMEQIVSKWH ETGVLQNVMQ HKLVFIETQD VVETSLALDN YRRACNCGRG AVFLSVARGK VAEGIDFDRH YGRAVIMYGV PYQYTLSRIL RARLEYLRET FQIKEADFLA FDAVRQAAQC VGRVIRSKAD YGLMVFADKR YNSHDKRGKL PGWITTHLKE ERLNLSTDMA VHVARTFMRE MAQPYDRGYN N // ID C3Y0H1_BRAFL Unreviewed; 763 AA. AC C3Y0H1; DT 28-JUL-2009, integrated into UniProtKB/TrEMBL. DT 28-JUL-2009, sequence version 1. DT 11-MAY-2016, entry version 51. DE SubName: Full=Putative uncharacterized protein {ECO:0000313|EMBL:EEN66244.1}; GN ORFNames=BRAFLDRAFT_286830 {ECO:0000313|EMBL:EEN66244.1}; OS Branchiostoma floridae (Florida lancelet) (Amphioxus). OC Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; OC Branchiostoma. OX NCBI_TaxID=7739 {ECO:0000313|Proteomes:UP000001554}; RN [1] {ECO:0000313|EMBL:EEN66244.1, ECO:0000313|Proteomes:UP000001554} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=S238N-H82 {ECO:0000313|EMBL:EEN66244.1, RC ECO:0000313|Proteomes:UP000001554}; RC TISSUE=Testes {ECO:0000313|EMBL:EEN66244.1}; RX PubMed=18563158; DOI=10.1038/nature06967; RG US DOE Joint Genome Institute (JGI-PGF); RA Putnam N.H., Butts T., Ferrier D.E.K., Furlong R.F., Hellsten U., RA Kawashima T., Robinson-Rechavi M., Shoguchi E., Terry A., Yu J.-K., RA Benito-Gutierrez E.L., Dubchak I., Garcia-Fernandez J., RA Gibson-Brown J.J., Grigoriev I.V., Horton A.C., de Jong P.J., RA Jurka J., Kapitonov V.V., Kohara Y., Kuroki Y., Lindquist E., RA Lucas S., Osoegawa K., Pennacchio L.A., Salamov A.A., Satou Y., RA Sauka-Spengler T., Schmutz J., Shin-I T., Toyoda A., RA Bronner-Fraser M., Fujiyama A., Holland L.Z., Holland P.W.H., RA Satoh N., Rokhsar D.S.; RT "The amphioxus genome and the evolution of the chordate karyotype."; RL Nature 453:1064-1071(2008). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GG666478; EEN66244.1; -; Genomic_DNA. DR RefSeq; XP_002610234.1; XM_002610188.1. DR UniGene; Bfl.21860; -. DR STRING; 7739.JGI286830; -. DR GeneID; 7215086; -. DR KEGG; bfo:BRAFLDRAFT_286830; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; C3Y0H1; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR Proteomes; UP000001554; Partially assembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000001554}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000001554}. FT DOMAIN 7 283 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 763 AA; 87290 MW; 8726C972147173B0 CRC64; MKINIDGLLV LFPYDYIYPE QYSYMVELKR SLDAKGHCVL EMPSGTGKTV SLLSLIVAYL KTSPKDVCKL IYCSRTVPEI EKVLEELRKL MEYYEKETGE PPNLIGLALS SRKNLCIHPE VSTLQFGKEV DGRCHQMTAS FVRSRHERDP DVPVCDFYER FDALGRETLL PPGIYNLDDM KDVGREKGYC PYFMARYAIT YANIVVYSYH YLLDPKIADL VSKELAKNSV VVFDEAHNID NVCIDSMSVT INRRMLDRCQ TNVEALTRTV QRLKDTDQQR LRQEYSRLVE GLREANVARE TDVVLSNPVL PDEVLQEAVP GNIRTAEHFV GFMKRFLEYL KSRLRIQHVV QETPASFLKD LKEKVCLDRK PLRFCSERLN SLIRTLEIAD LTDFSPLILL ANFATLVSTY MKGFTLIMEP FDDRTPTISN PILNFSCMDA SIAIKPVFDR FQSVVITSGT LSPLDMYPKI LDFRPVNMAS FTMTLARPCI CPMIVGRGND QVTMTSKFES REDVAIIRNY GNLLVDMSAV VPDGIVAFFT SYSYMESTVA AWYEQGIIEN VQRNKLLFIE TQSAAETSVA LQKYQEACEN GRGAILLSVA RGKVSEGIDF EHHLGRAVVM FGIPYVYTQS RILKARLEYL RDQFQIREND FLTFDAMRHA AQCVGRVLRG KTDYGVMVFA DKRFARSDKR GKLPKWIQEY LSDGMCNLTT DEAVQVSKKF LRQMAQPFRR EDQLGLSLLT LEQLQTEEMK KRAQQTAHQA FMT // ID C4JYF4_UNCRE Unreviewed; 474 AA. AC C4JYF4; DT 07-JUL-2009, integrated into UniProtKB/TrEMBL. DT 07-JUL-2009, sequence version 1. DT 11-MAY-2016, entry version 34. DE SubName: Full=DNA repair helicase RAD3 {ECO:0000313|EMBL:EEP82340.1}; GN ORFNames=UREG_07205 {ECO:0000313|EMBL:EEP82340.1}; OS Uncinocarpus reesii (strain UAMH 1704). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; OC Eurotiomycetidae; Onygenales; Onygenaceae; Uncinocarpus. OX NCBI_TaxID=336963 {ECO:0000313|EMBL:EEP82340.1, ECO:0000313|Proteomes:UP000002058}; RN [1] {ECO:0000313|Proteomes:UP000002058} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=UAMH 1704 {ECO:0000313|Proteomes:UP000002058}; RX PubMed=19717792; DOI=10.1101/gr.087551.108; RA Sharpton T.J., Stajich J.E., Rounsley S.D., Gardner M.J., RA Wortman J.R., Jordar V.S., Maiti R., Kodira C.D., Neafsey D.E., RA Zeng Q., Hung C.-Y., McMahan C., Muszewska A., Grynberg M., RA Mandel M.A., Kellner E.M., Barker B.M., Galgiani J.N., Orbach M.J., RA Kirkland T.N., Cole G.T., Henn M.R., Birren B.W., Taylor J.W.; RT "Comparative genomic analyses of the human fungal pathogens RT Coccidioides and their relatives."; RL Genome Res. 19:1722-1731(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CH476619; EEP82340.1; -; Genomic_DNA. DR RefSeq; XP_002582432.1; XM_002582386.1. DR STRING; 336963.XP_002582432.1; -. DR EnsemblFungi; EEP82340; EEP82340; UREG_07205. DR GeneID; 8439807; -. DR KEGG; ure:UREG_07205; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; C4JYF4; -. DR KO; K10844; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000002058; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:InterPro. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR TIGRFAMs; TIGR00604; rad3; 1. PE 4: Predicted; KW ATP-binding {ECO:0000313|EMBL:EEP82340.1}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000002058}; KW Helicase {ECO:0000313|EMBL:EEP82340.1}; KW Hydrolase {ECO:0000313|EMBL:EEP82340.1}; KW Nucleotide-binding {ECO:0000313|EMBL:EEP82340.1}; KW Reference proteome {ECO:0000313|Proteomes:UP000002058}. FT DOMAIN 10 34 DEAD_2. {ECO:0000259|Pfam:PF06733}. FT DOMAIN 47 125 HBB. {ECO:0000259|Pfam:PF06777}. FT COILED 27 79 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 474 AA; 54068 MW; C6533BD2029AEF7C CRC64; MSLFLCAPDV FDEAHNIDNV CIEALSIDIT EDSLRKASRG ANNLERKIDE MKRSDADKLQ REYEKLVEGL READQAREED QLMANPALPD DLLKEAVPRN IRRAEHFVAF LKRFIEYLKT RMKRKPLRFC AERLTSLVRT LELMNIEDYQ PLQEVATFAT LTATYEKGFL LILEPFESEA ATVPNPILHF TCLDAAIAIK PVFDRFSSVI ITSGTLSPLE MYPKMLEFTT VLQESYSMTL ARRSFLPMIV TRGSDQAQIS SSFQIRNDPG VVRNYGNLLL EFSRITPDGI VVFFPSYLYM ESIIRNSVSE SFGLTFFRET IGYEKTTFSR STPCVTLHNA LGVCFEEKTI MESWSWLTAV SKRKRNQLPK WIAQNMLESE TNLSTDMAVA TAKNFLRTMA QPFKNKDQEG ISTWSLADLE RHVAKQKGEA AKRDQEAQQH QNMLAATNGA HVGNGDMEMY DDVMDEDLIM MDAE // ID C4R1T2_PICPG Unreviewed; 773 AA. AC C4R1T2; DT 07-JUL-2009, integrated into UniProtKB/TrEMBL. DT 07-JUL-2009, sequence version 1. DT 11-MAY-2016, entry version 52. DE SubName: Full=5' to 3' DNA helicase, involved in nucleotide excision repair and transcription {ECO:0000313|EMBL:CAY69456.1}; GN OrderedLocusNames=PAS_chr2-1_0797 {ECO:0000313|EMBL:CAY69456.1}; OS Komagataella pastoris (strain GS115 / ATCC 20864) (Yeast) (Pichia OS pastoris). OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; OC Saccharomycetes; Saccharomycetales; Phaffomycetaceae; Komagataella. OX NCBI_TaxID=644223 {ECO:0000313|EMBL:CAY69456.1, ECO:0000313|Proteomes:UP000000314}; RN [1] {ECO:0000313|EMBL:CAY69456.1, ECO:0000313|Proteomes:UP000000314} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=GS115 / ATCC 20864 {ECO:0000313|Proteomes:UP000000314}; RX PubMed=19465926; DOI=10.1038/nbt.1544; RA De Schutter K., Lin Y.-C., Tiels P., Van Hecke A., Glinka S., RA Weber-Lehmann J., Rouze P., Van de Peer Y., Callewaert N.; RT "Genome sequence of the recombinant protein production host Pichia RT pastoris."; RL Nat. Biotechnol. 27:561-566(2009). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FN392320; CAY69456.1; -; Genomic_DNA. DR RefSeq; XP_002491736.1; XM_002491691.1. DR STRING; 644223.XP_002491736.1; -. DR EnsemblFungi; CAY69456; CAY69456; PAS_chr2-1_0797. DR GeneID; 8198074; -. DR KEGG; ppa:PAS_chr2-1_0797; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR HOGENOM; HOG000205390; -. DR InParanoid; C4R1T2; -. DR KO; K10844; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000000314; Chromosome 2. DR GO; GO:0000439; C:core TFIIH complex; IEA:EnsemblFungi. DR GO; GO:0005829; C:cytosol; IEA:EnsemblFungi. DR GO; GO:0005675; C:holo TFIIH complex; IEA:EnsemblFungi. DR GO; GO:0000112; C:nucleotide-excision repair factor 3 complex; IEA:EnsemblFungi. DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:EnsemblFungi. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0043141; F:ATP-dependent 5'-3' DNA helicase activity; IEA:EnsemblFungi. DR GO; GO:0003684; F:damaged DNA binding; IEA:EnsemblFungi. DR GO; GO:0000717; P:nucleotide-excision repair, DNA duplex unwinding; IEA:EnsemblFungi. DR GO; GO:0033683; P:nucleotide-excision repair, DNA incision; IEA:EnsemblFungi. DR GO; GO:0070816; P:phosphorylation of RNA polymerase II C-terminal domain; IEA:EnsemblFungi. DR GO; GO:0045951; P:positive regulation of mitotic recombination; IEA:EnsemblFungi. DR GO; GO:0010525; P:regulation of transposition, RNA-mediated; IEA:EnsemblFungi. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:EnsemblFungi. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CAY69456.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000000314}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:CAY69456.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CAY69456.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CAY69456.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000000314}. FT DOMAIN 7 288 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 738 765 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 773 AA; 88858 MW; D49044ACE4B09340 CRC64; MKFLIDDLPV IFPYPKIYPE QYAYMCDIKR TLDIGGNCIL EMPSGTGKTI SLLSLTVSYQ MFYPEHRKII YCSRTMSEIE KALIELTKLM DFRTKELGVK ENFRGLGLTS RKNLCLHPIS QERKGIVVDE KCRRMTNGQL SLQVAKGEAD KDQLCSFHEK MNDLDSHEYI PIGVYSFEEL IKYCKGVGIC PYFTVRRMMS FCNIIIYSYH YLLDPKIAQR VSKELSKESI VIFDEAHNID NVCIESLSLD LTNDTLKKAS RGVNSLSKKV DEIKRIDSKK LQDEYERLVE GLRATESSRN EELIMANPIL PDDILTESIP GNIRRGEHFV MFLKRFIEYL KTRMKVLHVI SETPASFLQH LKLLTFIERK PLRFCAERLA LLVKTLELTE IEEFIALKDI ATFATLVSTY ETGFQLILEP YETENASGPN PILHFTCLDA SIAIKPIFDR FSSVIITSGT ISPLDMYPKM LKFDTVIQES YTMTLSRRSF LPLIVTKGSD QVSISSRFEI RNDPSVVRNY GTLLIEFSKI TPDGLVVFFP SYLYMESIIS MWQNMGILDE VWKYKLILVE TPDSQETSLG LETYRKACSN GRGAVLLSVA RGKVSEGIDF DHHFGRTVLM IGIPFQYTES RILKARLEYL RDHHQIKENE FLSFDAMRHA AQCLGRVLRG KDDYGIMVLA DRRFSRKRNQ LPKWIAQNLL DADTNLSTDM AIANAKKFLR TLAQPSNPKD QEGVSVWNAE QLKDHQKLQT KNVEAEMELD YLNDDELELA FEK // ID C4V9P9_NOSCE Unreviewed; 476 AA. AC C4V9P9; DT 28-JUL-2009, integrated into UniProtKB/TrEMBL. DT 28-JUL-2009, sequence version 1. DT 13-APR-2016, entry version 27. DE SubName: Full=Putative uncharacterized protein {ECO:0000313|EMBL:EEQ82054.1}; GN ORFNames=NCER_101303 {ECO:0000313|EMBL:EEQ82054.1}; OS Nosema ceranae (strain BRL01) (Microsporidian parasite). OC Eukaryota; Fungi; Microsporidia; Nosematidae; Nosema. OX NCBI_TaxID=578460 {ECO:0000313|Proteomes:UP000009082}; RN [1] {ECO:0000313|Proteomes:UP000009082} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=BRL01 {ECO:0000313|Proteomes:UP000009082}; RX PubMed=19503607; DOI=10.1371/journal.ppat.1000466; RA Cornman R.S., Chen Y.P., Schatz M.C., Street C., Zhao Y., Desany B., RA Egholm M., Hutchison S., Pettis J.S., Lipkin W.I., Evans J.D.; RT "Genomic analyses of the microsporidian Nosema ceranae, an emergent RT pathogen of honey bees."; RL PLoS Pathog. 5:E1000466-E1000466(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ACOL01000124; EEQ82054.1; -; Genomic_DNA. DR RefSeq; XP_002995725.1; XM_002995679.1. DR EnsemblFungi; EEQ82054; EEQ82054; NCER_101303. DR GeneID; 9424579; -. DR KEGG; nce:NCER_101303; -. DR EuPathDB; MicrosporidiaDB:NCER_101303; -. DR InParanoid; C4V9P9; -. DR KO; K10844; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000009082; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:InterPro. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SUPFAM; SSF52540; SSF52540; 2. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW Complete proteome {ECO:0000313|Proteomes:UP000009082}; KW Reference proteome {ECO:0000313|Proteomes:UP000009082}. FT DOMAIN 7 275 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 476 AA; 55287 MW; 4F316CAC5C9459E6 CRC64; MIIKLDNLDV YFPYSQIYPE QLQYIKELKS NIDTNGHILI EMPSGTGKTV ALLSITVSYI IHMKRFFNKK VKLVYCSRTV SEIDKALYEL ENLINYIKQY INFDFLGVGL TAKKILCVND EALSSRNIDI TCKKLRDLEK CDFYTNLYKD FTIPQGVYTL DKLINIGKSK GICPYYMIRN GLGMCDCIIY TYNYLIDPKI YGIVSKDLGE NCIIIFDEAH NIDSHCIEAL TFEIKRNTLD NATRCLKTII KLLENKKKEQ HNILLKEYQK MKGTLNIYTE DTIPHFYAEE EQKFEFVPGN LRDSAHFVGV LKRLVEFFKT KLKTTHLTTE TPASFCQSIK DLTFLNKKTL SFCSQRLGLL VQTLDFEDDN LYFLRRVADF GTMVSMYSKG FSVIFEPFDT QAHTVFNPIL RLACLDSSIA ISQVFTKFNN VIITSGTLSP IEMYPKIFKF CTEKNSRDRR NTRSKFYFAF NLNKRK // ID C4YAD8_CLAL4 Unreviewed; 439 AA. AC C4YAD8; DT 28-JUL-2009, integrated into UniProtKB/TrEMBL. DT 28-JUL-2009, sequence version 1. DT 13-APR-2016, entry version 31. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EEQ40948.1}; GN ORFNames=CLUG_05076 {ECO:0000313|EMBL:EEQ40948.1}; OS Clavispora lusitaniae (strain ATCC 42720) (Yeast) (Candida OS lusitaniae). OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; OC Saccharomycetes; Saccharomycetales; Metschnikowiaceae; Clavispora. OX NCBI_TaxID=306902 {ECO:0000313|EMBL:EEQ40948.1, ECO:0000313|Proteomes:UP000007703}; RN [1] {ECO:0000313|EMBL:EEQ40948.1, ECO:0000313|Proteomes:UP000007703} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 42720 {ECO:0000313|EMBL:EEQ40948.1, RC ECO:0000313|Proteomes:UP000007703}; RX PubMed=19465905; DOI=10.1038/nature08064; RA Butler G., Rasmussen M.D., Lin M.F., Santos M.A., Sakthikumar S., RA Munro C.A., Rheinbay E., Grabherr M., Forche A., Reedy J.L., RA Agrafioti I., Arnaud M.B., Bates S., Brown A.J., Brunke S., RA Costanzo M.C., Fitzpatrick D.A., de Groot P.W., Harris D., Hoyer L.L., RA Hube B., Klis F.M., Kodira C., Lennard N., Logue M.E., Martin R., RA Neiman A.M., Nikolaou E., Quail M.A., Quinn J., Santos M.C., RA Schmitzberger F.F., Sherlock G., Shah P., Silverstein K.A., RA Skrzypek M.S., Soll D., Staggs R., Stansfield I., Stumpf M.P., RA Sudbery P.E., Srikantha T., Zeng Q., Berman J., Berriman M., RA Heitman J., Gow N.A., Lorenz M.C., Birren B.W., Kellis M., Cuomo C.A.; RT "Evolution of pathogenicity and sexual reproduction in eight Candida RT genomes."; RL Nature 459:657-662(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CH408081; EEQ40948.1; -; Genomic_DNA. DR RefSeq; XP_002615061.1; XM_002615015.1. DR STRING; 306902.XP_002615061.1; -. DR EnsemblFungi; EEQ40948; EEQ40948; CLUG_05076. DR GeneID; 8495614; -. DR KEGG; clu:CLUG_05076; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; C4YAD8; -. DR KO; K10844; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000007703; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:InterPro. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SUPFAM; SSF52540; SSF52540; 2. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW Complete proteome {ECO:0000313|Proteomes:UP000007703}; KW Reference proteome {ECO:0000313|Proteomes:UP000007703}. FT DOMAIN 7 295 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 439 AA; 50539 MW; 0BDE53107279F386 CRC64; MKFYIDDLPV LFPYPRIYPE QYAYMCDIKK TLDVGGNCIL EMPSGTGKTV SLLSLTVAYQ MHYPEHRKIV YCSRTMSEIE KALVELHSLM EYRASELGYV EEFRGLGLTS RKNLCLHPTV SKERKGAVVD EKCRRLTNGQ LKQKLEQQNV SQDEMRNHSD QYGLCSFHEK LYDYDQHDLI PSGVYSFEAL LDYCKQAGTC PYFTVRRMLS FCNIIIYSYH YLLDPKIAER VSRELSKDSI VIFDEAHNID NVCIESLSLY LTDDTLKRAG RGANKLAEAV DEMKAQDSAK LQDEYEKLVE GLRQNEIARD EELFMANPAL PQDLLEEAVP GNIRKAEHFL SFLKRFIEYL KTRMKVLHVI SETPVSFLQH LKELTFIERK PLRFCSERLS LLVRTLDLAD VDDLNALKDI ATFATLVSTY DTGFQLILEP FETEGADSA // ID C4YT76_CANAW Unreviewed; 701 AA. AC C4YT76; DT 28-JUL-2009, integrated into UniProtKB/TrEMBL. DT 28-JUL-2009, sequence version 1. DT 11-MAY-2016, entry version 43. DE SubName: Full=DNA repair helicase RAD3 {ECO:0000313|EMBL:EEQ46817.1}; GN ORFNames=CAWG_05362 {ECO:0000313|EMBL:EEQ46817.1}; OS Candida albicans (strain WO-1) (Yeast). OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; OC Saccharomycetes; Saccharomycetales; Debaryomycetaceae; OC Candida/Lodderomyces clade; Candida. OX NCBI_TaxID=294748 {ECO:0000313|EMBL:EEQ46817.1, ECO:0000313|Proteomes:UP000001429}; RN [1] {ECO:0000313|EMBL:EEQ46817.1, ECO:0000313|Proteomes:UP000001429} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=WO-1 {ECO:0000313|EMBL:EEQ46817.1, RC ECO:0000313|Proteomes:UP000001429}; RX PubMed=19465905; DOI=10.1038/nature08064; RA Butler G., Rasmussen M.D., Lin M.F., Santos M.A., Sakthikumar S., RA Munro C.A., Rheinbay E., Grabherr M., Forche A., Reedy J.L., RA Agrafioti I., Arnaud M.B., Bates S., Brown A.J., Brunke S., RA Costanzo M.C., Fitzpatrick D.A., de Groot P.W., Harris D., Hoyer L.L., RA Hube B., Klis F.M., Kodira C., Lennard N., Logue M.E., Martin R., RA Neiman A.M., Nikolaou E., Quail M.A., Quinn J., Santos M.C., RA Schmitzberger F.F., Sherlock G., Shah P., Silverstein K.A., RA Skrzypek M.S., Soll D., Staggs R., Stansfield I., Stumpf M.P., RA Sudbery P.E., Srikantha T., Zeng Q., Berman J., Berriman M., RA Heitman J., Gow N.A., Lorenz M.C., Birren B.W., Kellis M., Cuomo C.A.; RT "Evolution of pathogenicity and sexual reproduction in eight Candida RT genomes."; RL Nature 459:657-662(2009). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CM000313; EEQ46817.1; -; Genomic_DNA. DR EnsemblFungi; EEQ46817; EEQ46817; CAWG_05362. DR HOGENOM; HOG000205390; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000001429; Chromosome 7. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EEQ46817.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000001429}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EEQ46817.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EEQ46817.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EEQ46817.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}. FT DOMAIN 7 286 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 257 299 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 701 AA; 80346 MW; 353F7A9A908C8872 CRC64; MKFFIDDLPV LFPYPRIYPE QYAYMCDIKK TLDVGGNCIL EMPSGTGKTV SLLSLTVAYQ MHYPEHRKIV YCSRTMSEIE KALIELHKLM EFRANELGEV EDFRGLGLTS RKNLCLHPTI SKERKGVVVD EKCRRITNGQ LKEKIEKGVP TEDSLCSFHE KLYDLEPHNL VPSGVYSFDA LIKYCKEEGT CPYFTVRRMI PFCNIIIYSY HYLLDPKIAE RVSRELSKDS IVIFDEAHNI DNVCIESLSL DLTDETLKKA SRGANKLGEA IEDMKAQDSE KLQNEYEQLV EGLRQAEIAR DQELFMANPV LPQDLLDEAI PGNIRKGEHF IAFLKRFIEY LKTRMKVLHV ISETPTSFLQ HLKELTYIER KPLRFCSERL SLLVRTLEVT EIDDFNALKD IATFATLVST YDSGFQLILE PYETEGSTVP NPILHFTCLD ASIAIKPVFD RFSSVIITSG TISPLDMYPK MLKFETVIQE SYAMTLARRS FLPMIVTKGS DQVSISSRFE IRNDPSVVRN YGSLLIEFAK ITPDGMVVFF PSYLYMESII SMWQSMGVLD EVWKHKLILV ETPDAQETSL ALETYRKACS NGRGAVLLSV ARGKVSEGID FDHHYGRTVL MIGIPFQYTE SRILKARLEF MRDHFQIKEN DFLSFDAHET CSAVFGESFE RERRLWDYGF GRSKVCTEEE PVAEMDCAGV E // ID C5DN55_LACTC Unreviewed; 782 AA. AC C5DN55; DT 28-JUL-2009, integrated into UniProtKB/TrEMBL. DT 28-JUL-2009, sequence version 1. DT 11-MAY-2016, entry version 49. DE SubName: Full=KLTH0G14300p {ECO:0000313|EMBL:CAR25216.1}; GN OrderedLocusNames=KLTH0G14300g {ECO:0000313|EMBL:CAR25216.1}; OS Lachancea thermotolerans (strain ATCC 56472 / CBS 6340 / NRRL Y-8284) OS (Yeast) (Kluyveromyces thermotolerans). OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; OC Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Lachancea. OX NCBI_TaxID=559295 {ECO:0000313|EMBL:CAR25216.1, ECO:0000313|Proteomes:UP000002036}; RN [1] {ECO:0000313|EMBL:CAR25216.1, ECO:0000313|Proteomes:UP000002036} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 56472 / CBS 6340 / NRRL Y-8284 RC {ECO:0000313|Proteomes:UP000002036}; RX PubMed=19525356; DOI=10.1101/gr.091546.109; RG The Genolevures Consortium; RA Souciet J.-L., Dujon B., Gaillardin C., Johnston M., Baret P.V., RA Cliften P., Sherman D.J., Weissenbach J., Westhof E., Wincker P., RA Jubin C., Poulain J., Barbe V., Segurens B., Artiguenave F., RA Anthouard V., Vacherie B., Val M.-E., Fulton R.S., Minx P., Wilson R., RA Durrens P., Jean G., Marck C., Martin T., Nikolski M., Rolland T., RA Seret M.-L., Casaregola S., Despons L., Fairhead C., Fischer G., RA Lafontaine I., Leh V., Lemaire M., de Montigny J., Neuveglise C., RA Thierry A., Blanc-Lenfle I., Bleykasten C., Diffels J., Fritsch E., RA Frangeul L., Goeffon A., Jauniaux N., Kachouri-Lafond R., Payen C., RA Potier S., Pribylova L., Ozanne C., Richard G.-F., Sacerdot C., RA Straub M.-L., Talla E.; RT "Comparative genomics of protoploid Saccharomycetaceae."; RL Genome Res. 19:1696-1709(2009). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CU928171; CAR25216.1; -; Genomic_DNA. DR RefSeq; XP_002555653.1; XM_002555607.1. DR EnsemblFungi; CAR25216; CAR25216; KLTH0G14300g. DR GeneID; 8293938; -. DR KEGG; lth:KLTH0G14300g; -. DR HOGENOM; HOG000205390; -. DR InParanoid; C5DN55; -. DR KO; K10844; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000002036; Chromosome G. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000002036}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000002036}. FT DOMAIN 7 285 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 782 AA; 89768 MW; 231E5C0C2B91EC30 CRC64; MKFYIDDLPV IFPYPKIYPE QYQYMCDIKK TLDAGGNSIL EMPSGTGKTV SLLSLAVAYQ THYAEHRKII YCSRTMSEIE KALVELESLM DYRSKELGHK EHFRGLGLTS RKNLCLHPRV RKERKGTVVD EKCRRMTNGQ AARKAEQDPT ANIELCDFHE NLNTMDPENY VPVGVYSFEK LIKYCEERTM CPYFTVRRMI AMCDIMIYSY HYLLDPKISE RVSKEVSRDA IVIFDEAHNI DNVCIESLSL DLTNDVLKRA TKGANNLNEK IQEVRQVDSQ RLQDEYEKLV NGLRAPDMLG AEEPPVESPV LSQDLLSEAI PGNIRRAEHF VSFLKRFIEY LKTRMKVLHV ISETPNSFLQ HLKQLTFIER KPLRFCSERL SLLVRTLEVS EIEEFTALKD IATFATLIST YEEGFVLIIE PYEIENAAVP NPIMRFTCLD ASIAIKPVFD KFSSVIITSG TISPLDMYPK MLNFETVLQE SYAMTLAKKS FLPMIVTKGS DQVAISSRFE IRNDPSIVRN YGSMLVEFAK ITPDGMVVFF PSYLYMESII SMWQTMGILD EVWKYKLILV ETPDAQETSL ALETYRKACS NGRGAILLSV ARGKVSEGID FDHHFGRTVL MIGIPFQYTE SRILKARLEF LREHYQIREN DFLSFDAMRH AAQCLGRVLR GKDDYGVMVL ADRRFARKKG QLPKWIAQGL SDADLNLSTD MAIANTKQFL RTMAQPTDPK DQEGVSLWNF DQLIQFQNEQ KKKKGQGFVL DTQPVEEQET SKDQDGDIQM LQ // ID C5DRW3_ZYGRC Unreviewed; 770 AA. AC C5DRW3; DT 28-JUL-2009, integrated into UniProtKB/TrEMBL. DT 28-JUL-2009, sequence version 1. DT 11-MAY-2016, entry version 49. DE SubName: Full=ZYRO0B11836p {ECO:0000313|EMBL:CAR26524.1}; GN OrderedLocusNames=ZYRO0B11836g {ECO:0000313|EMBL:CAR26524.1}; OS Zygosaccharomyces rouxii (strain ATCC 2623 / CBS 732 / NBRC 1130 / OS NCYC 568 / NRRL Y-229) (Candida mogii). OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; OC Saccharomycetes; Saccharomycetales; Saccharomycetaceae; OC Zygosaccharomyces. OX NCBI_TaxID=559307 {ECO:0000313|Proteomes:UP000008536}; RN [1] {ECO:0000313|EMBL:CAR26524.1, ECO:0000313|Proteomes:UP000008536} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 2623 / CBS 732 / NBRC 1130 / NCYC 568 / NRRL Y-229 RC {ECO:0000313|Proteomes:UP000008536}; RX PubMed=19525356; DOI=10.1101/gr.091546.109; RG The Genolevures Consortium; RA Souciet J.-L., Dujon B., Gaillardin C., Johnston M., Baret P.V., RA Cliften P., Sherman D.J., Weissenbach J., Westhof E., Wincker P., RA Jubin C., Poulain J., Barbe V., Segurens B., Artiguenave F., RA Anthouard V., Vacherie B., Val M.-E., Fulton R.S., Minx P., Wilson R., RA Durrens P., Jean G., Marck C., Martin T., Nikolski M., Rolland T., RA Seret M.-L., Casaregola S., Despons L., Fairhead C., Fischer G., RA Lafontaine I., Leh V., Lemaire M., de Montigny J., Neuveglise C., RA Thierry A., Blanc-Lenfle I., Bleykasten C., Diffels J., Fritsch E., RA Frangeul L., Goeffon A., Jauniaux N., Kachouri-Lafond R., Payen C., RA Potier S., Pribylova L., Ozanne C., Richard G.-F., Sacerdot C., RA Straub M.-L., Talla E.; RT "Comparative genomics of protoploid Saccharomycetaceae."; RL Genome Res. 19:1696-1709(2009). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CU928174; CAR26524.1; -; Genomic_DNA. DR RefSeq; XP_002495457.1; XM_002495412.1. DR EnsemblFungi; CAR26524; CAR26524; ZYRO0B11836g. DR GeneID; 8202618; -. DR KEGG; zro:ZYRO0B11836g; -. DR HOGENOM; HOG000205390; -. DR InParanoid; C5DRW3; -. DR KO; K10844; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000008536; Chromosome B. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000008536}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000008536}. FT DOMAIN 7 285 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 770 AA; 88797 MW; 6E91808323E5ABB8 CRC64; MKFFIDDLPV LFPYPKIYPE QYHYMCDLKR TLDSGGNSIL EMPSGTGKTV SLLSLTIAYQ MHYPEHRKII YCSRTMSEIE KALVELENLM DYRTKELGYR EDFRGLGLTS RKNLCLHPQV SKERNGTLVD EKCRRMTNGQ AKHKQEADPD AKVELCDYHE NLYNYQVEDY LPKGVFSFEK LIRYCEERTL CPYFIVRRMI SLCNIIIYSY HYLLDPKIAE RVSNEVSKDG IVIFDEAHNI DNVCIESLSL DLTNDVLKRA TKGAYALENR IDEVRQVDAR RLQDEYDKLV QDLHAADILD QEEEPAVETP VLSQDLITEA MPGNIRRAEH FVSFLKRLIE YLKTRMKVLH VISETPKSFL QHLKQLTFID RKPLRFCAER LSLLVRTLEV TEIEDFTALK DIATFATLIS TYESGFLLII EPYEIENAAV PNPIMRFTCL DASIAIKPVF ERFSSVIITS GTISPLDMYP RMLNFDTVLQ KSYAMTLAKK SFLPMIVTKG SDQVAISSRF EIRNDPSIVR NYGSMLVEFA KITPDGMVVF FPSYLYMESI ISMWQTMGIL DEVWKYKLIL VETPDAQETS LALETYRKAC SNGRGAIILS VARGKVSEGI DFDHHYGRTV LMIGIPFQYT ESRILKARLE FLRENYQIRE NDFLSFDAMR HAAQCLGRVL RGKDDYGVMI LADRRFSRKR NQLPKWISQG LSDADLNLST DMAIANAKQF LRTMAQSTDP KDQEGVSVWR HEELIKYQQE KQGAPNNGTD LMHMEVDVEG // ID C5FC47_ARTOC Unreviewed; 792 AA. AC C5FC47; DT 28-JUL-2009, integrated into UniProtKB/TrEMBL. DT 28-JUL-2009, sequence version 1. DT 11-MAY-2016, entry version 44. DE SubName: Full=DNA repair helicase RAD3 {ECO:0000313|EMBL:EEQ27470.1}; GN ORFNames=MCYG_00358 {ECO:0000313|EMBL:EEQ27470.1}; OS Arthroderma otae (strain ATCC MYA-4605 / CBS 113480) (Microsporum OS canis). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; OC Eurotiomycetidae; Onygenales; Arthrodermataceae; Arthroderma. OX NCBI_TaxID=554155 {ECO:0000313|EMBL:EEQ27470.1, ECO:0000313|Proteomes:UP000002035}; RN [1] {ECO:0000313|Proteomes:UP000002035} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC MYA-4605 / CBS 113480 {ECO:0000313|Proteomes:UP000002035}; RX PubMed=22951933; DOI=10.1128/mBio.00259-12; RA Martinez D.A., Oliver B.G., Graeser Y., Goldberg J.M., Li W., RA Martinez-Rossi N.M., Monod M., Shelest E., Barton R.C., Birch E., RA Brakhage A.A., Chen Z., Gurr S.J., Heiman D., Heitman J., Kosti I., RA Rossi A., Saif S., Samalova M., Saunders C.W., Shea T., RA Summerbell R.C., Xu J., Young S., Zeng Q., Birren B.W., Cuomo C.A., RA White T.C.; RT "Comparative genome analysis of Trichophyton rubrum and related RT dermatophytes reveals candidate genes involved in infection."; RL MBio 3:E259-E259(2012). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; DS995701; EEQ27470.1; -; Genomic_DNA. DR RefSeq; XP_002850254.1; XM_002850208.1. DR STRING; 554155.XP_002850254.1; -. DR EnsemblFungi; EEQ27470; EEQ27470; MCYG_00358. DR GeneID; 9225315; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000002035; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EEQ27470.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000002035}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EEQ27470.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EEQ27470.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EEQ27470.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000002035}. FT DOMAIN 7 287 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 248 300 {ECO:0000256|SAM:Coils}. FT COILED 735 758 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 792 AA; 90287 MW; AEE4FC36873FD549 CRC64; MEFYIDDLPI LFPYPRIYPE QYAYMCDLKK VLDAGGHCVL EMPSGTGKTI TLLALIVAYQ QHYPEHRKLI YCSRTMSEIE KALSELHALM KYRSQKLGAV EDFRALGLTS RKNLCLHPSV KREKSGTVVD ARCRSLTAGF VKEKKEKGED VELCIYHENL DLLEPGNLVP PGVFTLDGLI KYGEQYKQCP YFSARRMMQY CNVIIYSYHY LLDPKIAERV SKELSRDSII VFDEAHNIDN VCIESLSIDL TEDSLRKASR GANNLERKID EMKSTDAEKL QNEYQKLVEG LQEADEAREE EQLMANPVLP DDLLKESVPG NIRRAEHFVA FLKRFIEYLK TRMKVTHTIS ETPLSFLSHL KDLTFIERKP LRFCAERLTS LVRTLELVNI EDYQPLQEVA TFATLAATYE KGFLLILEPF ESDTATVPNP ILHFTCLDAA IAIKPVFDRF SSVIITSGTL SPLEMYPKML GFDAALQESY SMTLARRSFL PMIVTRGSDQ AQISSSFQIR NDPGVVRNYG NMLLEFCRIT PDGVVVFFPS YLYMESIISM WQGMGILDSV WNYKLILVET PDSQESSLAL ETYRTACCNG RGAVLLCVAR GKVSEGIDFD HHYGRAVLCI GVPFQYTESR ILKARLEFLR ENYRIRENDF LSFDALRHAA QCLGRVLRGK DDYGVMVLAD RRFQKKRNQL PKWISQAMLE SETNLSTDMA VATAKIFLKS MAQPFKAKDQ EGISTWSLED LKRHLEKKKQ EVEKEQGNQM VWTATNGAAA PDAHAMGDDE DFNEDLLAEL EA // ID C5G7Q3_AJEDR Unreviewed; 779 AA. AC C5G7Q3; DT 28-JUL-2009, integrated into UniProtKB/TrEMBL. DT 28-JUL-2009, sequence version 1. DT 11-MAY-2016, entry version 38. DE SubName: Full=DNA repair helicase RAD3 {ECO:0000313|EMBL:EEQ84204.1}; GN ORFNames=BDCG_01009 {ECO:0000313|EMBL:EEQ84204.1}; OS Ajellomyces dermatitidis (strain ER-3 / ATCC MYA-2586) (Blastomyces OS dermatitidis). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; OC Eurotiomycetidae; Onygenales; Ajellomycetaceae; Blastomyces. OX NCBI_TaxID=559297 {ECO:0000313|EMBL:EEQ84204.1, ECO:0000313|Proteomes:UP000002039}; RN [1] {ECO:0000313|Proteomes:UP000002039} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ER-3 / ATCC MYA-2586 {ECO:0000313|Proteomes:UP000002039}; RA Champion M., Cuomo C.A., Ma L.-J., Henn M.R., Klein B., Goldman B., RA Young S.K., Kodira C.D., Zeng Q., Koehrsen M., Alvarado L., RA Berlin A.M., Heiman D.I., Hepburn T.A., Saif S., Shea T.D., Shenoy N., RA Sykes S., Galagan J.E., Nusbaum C., Birren B.W.; RT "The genome sequence of Blastomyces dermatitidis strain ER-3."; RL Submitted (FEB-2009) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; EQ999973; EEQ84204.1; -; Genomic_DNA. DR EnsemblFungi; EEQ84204; EEQ84204; BDCG_01009. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000002039; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EEQ84204.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000002039}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EEQ84204.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EEQ84204.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EEQ84204.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000002039}. FT DOMAIN 7 269 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 259 282 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 779 AA; 88936 MW; DF874E7FBEDD9801 CRC64; MQFFIDDLPV LFPYPRIYPE QYAYMCDLKK TLDAGGHCVL EMPSGTGKTV SLLSLIIAYQ QHRPEQRKLI YCSRTMSEIE KALAELKALM KYRTRQLGYA EDFRGLGLTS RKNLCLHPSV KREKSGAVVD ARCRSLTAGF NLDLLEPSNL VPPGVFTLDD IIKYGEQHKQ CPYFSIRRMM PFCNVIIYSY HYLLDPKIAE RVSQELSKDS IVVFDEAHNI DNVCIESLSI DLTEDSLRKA SRGATNLERK IEEMKSSDAE KLQNEYQKLV EGLREADEAR QEEQLMANPA LPDDLLKEAV PGNIRRAEHF VAFLKRFIEY LKTRMKITHT ISETPLSFLA HLKDLTFIER KPLRFCAERL ASLVRTLELM NLEDYQPLQQ VAAFATLAAT YEKGFLLILE PFESETATVP NPILHFTCLD AAIAIKPVFD RFSSVIVTSG TLSPLEMYPK MLKFTTVLQE SYTMTLARRS FLPMVVTRGS DQAQISSSFQ IRNDPGVVRN YGNLLLEFSR ITPDGIVVFF PSYLYMESII SMWQGMGILD LVWNYKLILV ETPDSQESSL ALETYRTACC NGRGAVLLCV ARGKVSEGID FDHHYGRAVI CIGVPFQYTE SRILKARLEF LRENYRIREN DFLSFDAMRH AAQCLGRVIR GKDDYGVMVL ADRRFQKRRS QLPKWISQAM LESETNLSTD MAVATAKSFL RTMAQPFKSR DQEGISTWSL ADLELHVKKQ KEEEGKRQRE AMANNQIPPD VVNGNRNGTM TAVDEFDENI DQELMMLDA // ID C5LPK7_PERM5 Unreviewed; 887 AA. AC C5LPK7; DT 28-JUL-2009, integrated into UniProtKB/TrEMBL. DT 28-JUL-2009, sequence version 1. DT 11-MAY-2016, entry version 35. DE SubName: Full=DNA repair helicase, putative {ECO:0000313|EMBL:EER01327.1}; GN ORFNames=Pmar_PMAR004200 {ECO:0000313|EMBL:EER01327.1}; OS Perkinsus marinus (strain ATCC 50983 / TXsc). OC Eukaryota; Alveolata; Perkinsea; Perkinsida; Perkinsidae; Perkinsus. OX NCBI_TaxID=423536 {ECO:0000313|Proteomes:UP000007800}; RN [1] {ECO:0000313|EMBL:EER01327.1, ECO:0000313|Proteomes:UP000007800} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 50983 / TXsc {ECO:0000313|Proteomes:UP000007800}; RA El-Sayed N., Caler E., Inman J., Amedeo P., Hass B., Wortman J.; RL Submitted (JUL-2008) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GG684180; EER01327.1; -; Genomic_DNA. DR RefSeq; XP_002768609.1; XM_002768563.1. DR STRING; 423536.XP_002768609.1; -. DR EnsemblProtists; EER01327; EER01327; Pmar_PMAR004200. DR GeneID; 9058886; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; C5LPK7; -. DR Proteomes; UP000007800; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 2. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EER01327.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000007800}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EER01327.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EER01327.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EER01327.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000007800}. FT DOMAIN 10 374 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 887 AA; 99047 MW; 530C79BE542A67F0 CRC64; MGIPNLNIDG LRVLFPYDAI YPEQVQYMHY LKQALDASHG QGLIEMPTGT GKTVTIMSLI TSYQLSHPQM GKLVYCTRTV PEMNQAIREL KLVIEYRERV LASEKPDEAP QKFLGIGLSA RRNMCIHPDV ANQADRDKID IKCREMTSNF LNKKSNRFSQ LSSGVSKANS GRNVQKPIEI SQKFSQNFLT CRCSFFEQYD ELIGGVGKRY NNDSESASNE EKKKFAIPSG VYTLEDLRVA GGAEGWCPYY MSKRLLRHAD VIVFNYQYVL DPRVSASALI AGEASGRGVM THGALAKEGE ERPAALGVDN NDDDQQFEPA VVIFDEAHNI DDICMDALTV TVDRKTIDRA SSNVKRLQHE VTQLKKVDEA RLKAEVENLM RGLAPASGMS EEDESISALR FGPNELKKAV SGVSHLVIPG NVRQAEHFLG VLQQVCAFLR AYIRVDKARA EGPLMFLHEL ESQQFIEART MKAFDARLRS LMNTLKITDI DEFSPLTKIC DLCTLASLHS KGFAVLTDPC PEAEVSQPVL REVAQYLVKN VKFAICSRRE ICFSLVLTSG TLSPLSMYSK LLGLDRVVVS EALDISLERD CIRPLIVTRS NDVVLSSSFQ SRKDEEVSKC YGTLLEELVQ VVPDGVVCFF TSKVFMQQVV RTWYDSGTLA RLSTHKVVFF ETDDVVSTTI ALSNYREACD QGRGGLFLAV ARGKVSEGID FDRHYGRAVV LFGVPFQYSL SRRLRARLAY IRDTHGISEG EFLTFDAMRA AAQCVGRVLR SKQDYGLMVL ADARYARADK RKKLPPWIGK FLIPAFSNLT VDMAVSSAKE FLLSMSQPMK HQAGLKGDGE PTRLVGAEEA EQWYLRERGK RGLPADQEGA PDPQHMRFTD PSLTVTT // ID C5MFW3_CANTT Unreviewed; 781 AA. AC C5MFW3; DT 28-JUL-2009, integrated into UniProtKB/TrEMBL. DT 28-JUL-2009, sequence version 1. DT 11-MAY-2016, entry version 40. DE SubName: Full=DNA repair helicase RAD3 {ECO:0000313|EMBL:EER31226.1}; GN ORFNames=CTRG_04956 {ECO:0000313|EMBL:EER31226.1}; OS Candida tropicalis (strain ATCC MYA-3404 / T1) (Yeast). OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; OC Saccharomycetes; Saccharomycetales; Debaryomycetaceae; OC Candida/Lodderomyces clade; Candida. OX NCBI_TaxID=294747 {ECO:0000313|EMBL:EER31226.1, ECO:0000313|Proteomes:UP000002037}; RN [1] {ECO:0000313|EMBL:EER31226.1, ECO:0000313|Proteomes:UP000002037} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC MYA-3404 / T1 {ECO:0000313|Proteomes:UP000002037}; RX PubMed=19465905; DOI=10.1038/nature08064; RA Butler G., Rasmussen M.D., Lin M.F., Santos M.A., Sakthikumar S., RA Munro C.A., Rheinbay E., Grabherr M., Forche A., Reedy J.L., RA Agrafioti I., Arnaud M.B., Bates S., Brown A.J., Brunke S., RA Costanzo M.C., Fitzpatrick D.A., de Groot P.W., Harris D., Hoyer L.L., RA Hube B., Klis F.M., Kodira C., Lennard N., Logue M.E., Martin R., RA Neiman A.M., Nikolaou E., Quail M.A., Quinn J., Santos M.C., RA Schmitzberger F.F., Sherlock G., Shah P., Silverstein K.A., RA Skrzypek M.S., Soll D., Staggs R., Stansfield I., Stumpf M.P., RA Sudbery P.E., Srikantha T., Zeng Q., Berman J., Berriman M., RA Heitman J., Gow N.A., Lorenz M.C., Birren B.W., Kellis M., Cuomo C.A.; RT "Evolution of pathogenicity and sexual reproduction in eight Candida RT genomes."; RL Nature 459:657-662(2009). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GG692401; EER31226.1; -; Genomic_DNA. DR RefSeq; XP_002550658.1; XM_002550612.1. DR STRING; 294747.XP_002550658.1; -. DR EnsemblFungi; EER31226; EER31226; CTRG_04956. DR GeneID; 8299030; -. DR KEGG; ctp:CTRG_04956; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR KO; K10844; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000002037; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EER31226.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000002037}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EER31226.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EER31226.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EER31226.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000002037}. FT DOMAIN 7 295 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 781 AA; 89760 MW; 3CD1A40A73882FED CRC64; MKFYIDDLPV LFPYPRIYPE QYAYMCDIKK TLDVGGNCIL EMPSGTGKTV SLLSLTVAYQ MHYPEHRKIV YCSRTMSEIE KALIELHKLM EYRANELGEV EDFRGLGLTS RKNLCLHPTI SKERKGVVVD EKCRRITNGQ LKSKIEKGIV TEEDQLLNPE TNSLCSYHEK LYDYEPHNLI PPGVYSFDAL LRYCKDEGTC PYFTVRRMIP FCNIIIYSYH YLLDPKIAER VSKELSKDSI IIFDEAHNID NVCIESLSLD LTEDTLKRAT RGANKLGEAI EEMKSQDSEK LQNEYEQLVE GLRQAEIARD QELFMANPVL PQDLLDEAIP GNIRKGEHFI AFLKRFVEYL KTRMKVLHVI SETPTSFLQH LKDLTYIERK PLRFCSERLS LLVRTLELSE VEDFNALKDI ATFATLVSTY DTGFQLILEP YETEGSTVPN PILHFTCLDA SIAIKPVFER FSSVIITSGT ISPLDMYPKM MNFQTVIQQS YSMTLARRSF LPMIVTKGSD QVSISSRFEI RNDPSVVRNY GSLLVEFAKI TPDGMVVFFP SYLYMESIIS MWQNMGVLDE VWKHKLILVE TPDAQETSLA LETYRKACSN GRGAVLLSVA RGKVSEGIDF DHHYGRTVLM IGIPFQYTES RILKARLEFM RDHFSIKEND FLSFDAMRHA AQCLGRVLRG KDDYGIMVLA DRRFSRKKNQ LPKWIAQALN DSDTNLSTDM ALATGKKFLR SLAQPSNPKD QEGVSVWNLE QLEEYQKQFK KVEEVEEADF MDIDEDDLDL L // ID C5Z000_SORBI Unreviewed; 758 AA. AC C5Z000; DT 01-SEP-2009, integrated into UniProtKB/TrEMBL. DT 01-SEP-2009, sequence version 1. DT 11-MAY-2016, entry version 51. DE SubName: Full=Putative uncharacterized protein Sb09g003450 {ECO:0000313|EMBL:EES19010.1}; GN Name=Sb09g003450 {ECO:0000313|EMBL:EES19010.1}; GN ORFNames=SORBIDRAFT_09g003450 {ECO:0000313|EMBL:EES19010.1}; OS Sorghum bicolor (Sorghum) (Sorghum vulgare). OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; OC PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; OC Sorghum. OX NCBI_TaxID=4558 {ECO:0000313|Proteomes:UP000000768}; RN [1] {ECO:0000313|EMBL:EES19010.1, ECO:0000313|Proteomes:UP000000768} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768}; RX PubMed=19189423; DOI=10.1038/nature07723; RA Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J., RA Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., RA Schmutz J., Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., RA Chapman J., Feltus F.A., Gowik U., Grigoriev I.V., Lyons E., RA Maher C.A., Martis M., Narechania A., Otillar R.P., Penning B.W., RA Salamov A.A., Wang Y., Zhang L., Carpita N.C., Freeling M., RA Gingle A.R., Hash C.T., Keller B., Klein P., Kresovich S., RA McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman, Ware D., RA Westhoff P., Mayer K.F., Messing J., Rokhsar D.S.; RT "The Sorghum bicolor genome and the diversification of grasses."; RL Nature 457:551-556(2009). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CM000768; EES19010.1; -; Genomic_DNA. DR RefSeq; XP_002440580.1; XM_002440535.1. DR UniGene; Sbi.20608; -. DR STRING; 4558.Sb09g003450.1; -. DR EnsemblPlants; Sb09g003450.1; Sb09g003450.1; Sb09g003450. DR GeneID; 8075957; -. DR Gramene; Sb09g003450.1; Sb09g003450.1; Sb09g003450. DR KEGG; sbi:SORBI_09g003450; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR HOGENOM; HOG000205390; -. DR InParanoid; C5Z000; -. DR KO; K10844; -. DR Proteomes; UP000000768; Chromosome 9. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0000724; P:double-strand break repair via homologous recombination; IEA:EnsemblPlants. DR GO; GO:0010286; P:heat acclimation; IEA:EnsemblPlants. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR GO; GO:0045893; P:positive regulation of transcription, DNA-templated; IEA:EnsemblPlants. DR GO; GO:0043687; P:post-translational protein modification; IEA:EnsemblPlants. DR GO; GO:0006457; P:protein folding; IEA:EnsemblPlants. DR GO; GO:0009644; P:response to high light intensity; IEA:EnsemblPlants. DR GO; GO:0042542; P:response to hydrogen peroxide; IEA:EnsemblPlants. DR GO; GO:0010212; P:response to ionizing radiation; IEA:EnsemblPlants. DR GO; GO:0009411; P:response to UV; IEA:EnsemblPlants. DR GO; GO:0000394; P:RNA splicing, via endonucleolytic cleavage and ligation; IEA:EnsemblPlants. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:EnsemblPlants. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000000768}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000000768}. FT DOMAIN 7 288 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 758 AA; 85767 MW; 821FD31205B15D34 CRC64; MRFDLDGLPV HFPYAAIYPE QHAYMGELKR ALDARGHALL EMPTGTGKTA ALISLITSYS LANPSRPLRL IYCTRTVHEM EKTLAELRLL FAHLPPPAAR SLLALGLSSR KNLCVHPQAS AAAARDSVDT ACRRLTASWV REKAASDPES TPLCEFYETF DRAAAAGDLA SFMPPGVYTL ADLRALGRER RVCPYFLARQ MVKYANVVVY SYQYLLDPKV ASIVSREMQK ECVVVFDEAH NIDNVCIEAL SVSIRKQTLE GAERNLRRIS QEIDRFKATD ANRLRAEYNR LVDGLAQRGN LPISDAWLAN PALPDDILKE AVPGNIRRAE HFLAVLRRLV RFLDGRLETE NVENEMPVSF VASIHSQAGI DQKMLRFCYD RLHSLMMTLE ITDTDEFMHI QTICDFATLI GTYTRGFSII IEPYDERMPD IRDPVIQLSC HDASLAIRPV FDRFETVVIT SGTLSPIDLY PRLLNFNPVI SRSFTMSLTR DCICPMVLTR GSDQLPVSTK FDMRSDPGVV RNYGRLLLEM ASAVPDGIVC FFVSYSYMDG IVNSWHEMGI LQDIMQHKLV FIETPDVVET TLALDNYRKA CDCGRGAIFF SVARGKVAEG IDFDRHYGRL VIMFGVPFQY TLSRILLARL EYLRETFQIK EGDFLTFDAL RQAAQCVGRV IRSKADYGMM IFADKRYSRH DKRSKLPGWI LSHLHDAHLN LSTDMALHIA REFLRRMAQP YDKTGSGGKK TLLTEEDLQN MAQDGMEM // ID C6HCI5_AJECH Unreviewed; 773 AA. AC C6HCI5; DT 01-SEP-2009, integrated into UniProtKB/TrEMBL. DT 01-SEP-2009, sequence version 1. DT 11-MAY-2016, entry version 37. DE SubName: Full=DNA repair helicase RAD3 {ECO:0000313|EMBL:EER42275.1}; GN ORFNames=HCDG_03734 {ECO:0000313|EMBL:EER42275.1}; OS Ajellomyces capsulatus (strain H143) (Darling's disease fungus) OS (Histoplasma capsulatum). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; OC Eurotiomycetidae; Onygenales; Ajellomycetaceae; Histoplasma. OX NCBI_TaxID=544712 {ECO:0000313|EMBL:EER42275.1, ECO:0000313|Proteomes:UP000002624}; RN [1] {ECO:0000313|Proteomes:UP000002624} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=H143 {ECO:0000313|Proteomes:UP000002624}; RA Champion M., Cuomo C.A., Ma L.-J., Henn M.R., Sil A., Goldman B., RA Young S.K., Kodira C.D., Zeng Q., Koehrsen M., Alvarado L., RA Berlin A.M., Borenstein D., Chen Z., Engels R., Freedman E., RA Gellesch M., Goldberg J., Griggs A., Gujja S., Heiman D.I., RA Hepburn T.A., Howarth C., Jen D., Larson L., Lewis B., Mehta T., RA Park D., Pearson M., Roberts A., Saif S., Shea T.D., Shenoy N., RA Sisk P., Stolte C., Sykes S., Walk T., White J., Yandava C., Klein B., RA McEwen J.G., Puccia R., Goldman G.H., Felipe M.S., Nino-Vega G., RA San-Blas G., Taylor J.W., Mendoza L., Galagan J.E., Nusbaum C., RA Birren B.W.; RT "The genome sequence of Ajellomyces capsulatus strain H143."; RL Submitted (MAY-2009) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GG692422; EER42275.1; -; Genomic_DNA. DR EnsemblFungi; EER42275; EER42275; HCDG_03734. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000002624; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EER42275.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000002624}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EER42275.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EER42275.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EER42275.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000002624}. FT DOMAIN 1 263 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 224 276 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 773 AA; 88159 MW; 80536FC4B6C67694 CRC64; MCDLKKTLDA GGHCVLEMPS GTGKTVSLLS LIVAYQQHQP EQRKLIYCSR TMSEIEKALA ELKALMKYRA QQLGFAEDFR GLGLTSRKNL CLHPSVKREK SGAVVDARCR SLTAGFVKEK KEKGEDVELC IYHENLDLLE PSNLVPPGVF TLDDITKYGE QHKQCPYFSV RRMMPFCKVI IYSYHYLLDP KIAERVSQEL SKDSIVVFDE AHNIDNVCIE SLSIDLTEDS LRKASRGANN LERKIEEMKR SDAEKLQNEY QKLVEGLREA DEARQEEQLM ANPALPDDLL KEAVPGNIRR AEHFVAFLKR FIEYLKTRMK ITHTISETPL SFLAHLKDLT FIERKPLRFC AERLTSLVRT LELVNLEDYQ PLQQVAAFAT LAATYEKGFL LILEPFESET ATVPNPILHF TCLDAAIAIK PVFDRFSSVI VTSGTLSPLE MYPKMLKFTT VLQESYTMTL ARRSFLPMVV TRGSDQAQIS SSFQIRNDPG VVRNYGNLLL EFSRITPDGV VVFFPSYLYM ESIISMWQGM GILDLVWNYK LILVETPDSQ ESSLALETYR TACCNGRGAV LLCVARGKVS EGIDFDHHYG RAVICIGVPF QYTESRILKA RLEFLRENYR IRENDFLSFD AMRHAAQCLG RVIRGKDDYG VMVLADRRFQ KRRTQLPKWI SQAMLESETN LSTDMAVATA KSFLKTMAQP FKSKDQEGIS TWSLTDLEYH VKKKREEEDK RQRGEIANNQ IPSDVVNGNR NGRVTTVDEF DENIDQELMM LDA // ID C6Q008_9CLOT Unreviewed; 675 AA. AC C6Q008; DT 22-SEP-2009, integrated into UniProtKB/TrEMBL. DT 22-SEP-2009, sequence version 1. DT 11-MAY-2016, entry version 32. DE SubName: Full=DEAD_2 domain protein {ECO:0000313|EMBL:EET85182.1}; GN ORFNames=CcarbDRAFT_4375 {ECO:0000313|EMBL:EET85182.1}; OS Clostridium carboxidivorans P7. OC Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; OC Clostridium. OX NCBI_TaxID=536227 {ECO:0000313|EMBL:EET85182.1, ECO:0000313|Proteomes:UP000004198}; RN [1] {ECO:0000313|EMBL:EET85182.1, ECO:0000313|Proteomes:UP000004198} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=P7 {ECO:0000313|EMBL:EET85182.1, RC ECO:0000313|Proteomes:UP000004198}; RG US DOE Joint Genome Institute (JGI-PGF); RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., RA Bruce D., Goodwin L., Pitluck S., Larimer F., Land M.L., Hauser L., RA Hemme C.L.; RT "The draft genome of Clostridium carboxidivorans P7."; RL Submitted (JUN-2009) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:EET85182.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ACVI01000104; EET85182.1; -; Genomic_DNA. DR STRING; 536227.CcarbDRAFT_4375; -. DR EnsemblBacteria; EET85182; EET85182; CcarbDRAFT_4375. DR PATRIC; 26471429; VBICloCar96475_4284. DR eggNOG; ENOG4107QX6; Bacteria. DR eggNOG; COG1199; LUCA. DR Proteomes; UP000004198; Unassembled WGS sequence. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 4. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR014001; Helicase_ATP-bd. DR InterPro; IPR001650; Helicase_C. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00487; DEXDc; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 5. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. DR PROSITE; PS51194; HELICASE_CTER; 1. PE 4: Predicted; KW Complete proteome {ECO:0000313|Proteomes:UP000004198}; KW Reference proteome {ECO:0000313|Proteomes:UP000004198}. FT DOMAIN 75 331 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT DOMAIN 482 669 Helicase C-terminal. FT {ECO:0000259|PROSITE:PS51194}. SQ SEQUENCE 675 AA; 79101 MW; E32EF563ADF9CE60 CRC64; MAQAKCYAYI YAIQNDLKDI YVQLTYYSIS ADESKYFIKN FNIEELKLFF LDLLDKYFWW ANFMEQWIVK RNISIKNMNF PFDKYRPGQR EVAVAVYNTI KQESKIFVQA PTGVGKTIST LFPAIKAMEQ GLISKIFYLT AKTITANVAQ ECMTNMNNKG LKIKTLVITA KEKVCFKDKP SCNPEDCEFA KGHYDRLNDA LNEILSKETL ISREVIIEYA KRNKLCPFEF SLEIALWVDC IICDYNYAFN PQVYLKSFFE NGKEDYVFLI DEAHNLADRG REMFSAELYK KPFLKLKKVM TKKEPQIAKA LTSINSYMIK LRKICEEEDR NIYVQKEEIK DIYNLLRRFT KESEEWLAKN NKLEGYDELL QLYFDVLSYT RISEFYDNRF VTYVEKLGDD IKIKIFCLDP SYLLNEAVKR GKAAVFFSAT LSPISYFKEV LGGNEQDYTM RIPSPFPKEN MKLILANRIS TKYKNRESSY NLLSEYIHGL VCGRKGNYLI FFPSYVYMRN VYDIFCQEYS DINAVIQESS MSEESKKTFL DRFKNSSENM VAFAVLGGMF SEGIDLKGDK LIGVGIVGVG LPQLCFERDI IMNYFNDKNN MGYEYSYMYP GMNKVLQAAG RVIRTEEDRG IVMLMDERFS SRNYRELFPK HWEANTVVRN IKEVENIIKN FWENK // ID C7YZ83_NECH7 Unreviewed; 761 AA. AC C7YZ83; DT 13-OCT-2009, integrated into UniProtKB/TrEMBL. DT 13-OCT-2009, sequence version 1. DT 11-MAY-2016, entry version 48. DE SubName: Full=Predicted protein {ECO:0000313|EMBL:EEU42759.1}; GN ORFNames=NECHADRAFT_105105 {ECO:0000313|EMBL:EEU42759.1}; OS Nectria haematococca (strain 77-13-4 / ATCC MYA-4622 / FGSC 9596 / OS MPVI) (Fusarium solani subsp. pisi). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; OC Sordariomycetes; Hypocreomycetidae; Hypocreales; Nectriaceae; OC Fusarium; Fusarium solani species complex. OX NCBI_TaxID=660122 {ECO:0000313|Proteomes:UP000005206}; RN [1] {ECO:0000313|EMBL:EEU42759.1, ECO:0000313|Proteomes:UP000005206} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=77-13-4 / ATCC MYA-4622 / FGSC 9596 / MPVI RC {ECO:0000313|Proteomes:UP000005206}; RX PubMed=19714214; DOI=10.1371/journal.pgen.1000618; RA Coleman J.J., Rounsley S.D., Rodriguez-Carres M., Kuo A., RA Wasmann C.C., Grimwood J., Schmutz J., Taga M., White G.J., Zhou S., RA Schwartz D.C., Freitag M., Ma L.J., Danchin E.G., Henrissat B., RA Coutinho P.M., Nelson D.R., Straney D., Napoli C.A., Barker B.M., RA Gribskov M., Rep M., Kroken S., Molnar I., Rensing C., Kennell J.C., RA Zamora J., Farman M.L., Selker E.U., Salamov A., Shapiro H., RA Pangilinan J., Lindquist E., Lamers C., Grigoriev I.V., Geiser D.M., RA Covert S.F., Temporini E., Vanetten H.D.; RT "The genome of Nectria haematococca: contribution of supernumerary RT chromosomes to gene expansion."; RL PLoS Genet. 5:E1000618-E1000618(2009). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GG698904; EEU42759.1; -; Genomic_DNA. DR RefSeq; XP_003048472.1; XM_003048426.1. DR EnsemblFungi; NechaT105105; NechaP105105; NechaG105105. DR GeneID; 9667395; -. DR KEGG; nhe:NECHADRAFT_105105; -. DR InParanoid; C7YZ83; -. DR KO; K10844; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000005206; Unassembled WGS sequence. DR GO; GO:0000439; C:core TFIIH complex; IEA:EnsemblFungi. DR GO; GO:0005829; C:cytosol; IEA:EnsemblFungi. DR GO; GO:0005675; C:holo TFIIH complex; IEA:EnsemblFungi. DR GO; GO:0000112; C:nucleotide-excision repair factor 3 complex; IEA:EnsemblFungi. DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:EnsemblFungi. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0043141; F:ATP-dependent 5'-3' DNA helicase activity; IEA:EnsemblFungi. DR GO; GO:0003684; F:damaged DNA binding; IEA:EnsemblFungi. DR GO; GO:0000717; P:nucleotide-excision repair, DNA duplex unwinding; IEA:EnsemblFungi. DR GO; GO:0033683; P:nucleotide-excision repair, DNA incision; IEA:EnsemblFungi. DR GO; GO:0070816; P:phosphorylation of RNA polymerase II C-terminal domain; IEA:EnsemblFungi. DR GO; GO:0045951; P:positive regulation of mitotic recombination; IEA:EnsemblFungi. DR GO; GO:0010525; P:regulation of transposition, RNA-mediated; IEA:EnsemblFungi. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:EnsemblFungi. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000005206}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000005206}. FT DOMAIN 1 256 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 227 269 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 761 AA; 87486 MW; 5B7AA89FFCC1928A CRC64; MQTLDAGGHC VLEMPSGTGK TVSLLSLIVA YQQYMPEKRK LIYCSRTMSE IEKALVELKS LMKYRAEELG YEEEFRGLGL TSRKNLCLHP SVKREKSGSV VDARCRSLTA GFVKEKKDRG ENVDVCVYHD NLDLLEPHNL IPNGVWSFDD IIRYGEEHKQ CPYFTARRMM QYCNVVIFSY HYLLDPKIAE RVSKDFSKDC IVVFDEAHNI DNVCIESLST DITEDSLRKA TRGAQNLENR IAQMRDTDQE QLQNEYQKLV QGLRDAEEAR QEDAFMANPA LPADLLQEAV PGNIRRAEHF VAFLKRFIEY LKTRMKVRQV ISETPPSFLA HLKEHTFIEK KPLRFCAERL TSLVRTLELT NIEDYQPLQE VATFATLVST YEKGFLLILE PYESDTAEVP NPILHFTCLD AAIAIRPVFE RFYSVIITSG TISPLEIYPK MLDFSTVIQE SYSMTLARRS FLPMIVTRGS DQASVSTSFQ VRNEPSVVRN YGNLLTEFAK ITPDGMVVFF PSYLYMESII SMWQGMGILD EVWKYKLILV ETPDAQETSL ALETYRTACC NGRGAVLLCV ARGKVSEGID FDHQYGRTVL CIGVPFQYTE SRILKARLQF LRETYRIKEN DFLSFDAMRH AAQCLGRVLR GKDDYGIMVL ADRRFQKKRT QLPKWINQGL QEADVNLSTD MAVSSARRFL RTMAQPFRAK DQEGISTWGY KDLMEHKEKM DLERIKELEE AAQKPQPAAP INQYEYDDEE LDQDMMEMDG F // ID C8VRA9_EMENI Unreviewed; 791 AA. AC C8VRA9; DT 03-NOV-2009, integrated into UniProtKB/TrEMBL. DT 03-NOV-2009, sequence version 1. DT 11-MAY-2016, entry version 44. DE SubName: Full=5' to 3' DNA helicase (Eurofung) {ECO:0000313|EMBL:CBF88902.1}; GN ORFNames=ANIA_09436 {ECO:0000313|EMBL:CBF88902.1}; OS Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL OS 194 / M139) (Aspergillus nidulans). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; OC Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus. OX NCBI_TaxID=227321 {ECO:0000313|EMBL:CBF88902.1, ECO:0000313|Proteomes:UP000000560}; RN [1] {ECO:0000313|Proteomes:UP000000560} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139 RC {ECO:0000313|Proteomes:UP000000560}; RX PubMed=16372000; DOI=10.1038/nature04341; RA Galagan J.E., Calvo S.E., Cuomo C., Ma L.J., Wortman J.R., RA Batzoglou S., Lee S.I., Basturkmen M., Spevak C.C., Clutterbuck J., RA Kapitonov V., Jurka J., Scazzocchio C., Farman M., Butler J., RA Purcell S., Harris S., Braus G.H., Draht O., Busch S., D'Enfert C., RA Bouchier C., Goldman G.H., Bell-Pedersen D., Griffiths-Jones S., RA Doonan J.H., Yu J., Vienken K., Pain A., Freitag M., Selker E.U., RA Archer D.B., Penalva M.A., Oakley B.R., Momany M., Tanaka T., RA Kumagai T., Asai K., Machida M., Nierman W.C., Denning D.W., RA Caddick M., Hynes M., Paoletti M., Fischer R., Miller B., Dyer P., RA Sachs M.S., Osmani S.A., Birren B.W.; RT "Sequencing of Aspergillus nidulans and comparative analysis with A. RT fumigatus and A. oryzae."; RL Nature 438:1105-1115(2005). RN [2] {ECO:0000313|Proteomes:UP000000560} RP GENOME REANNOTATION. RC STRAIN=FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139 RC {ECO:0000313|Proteomes:UP000000560}; RX PubMed=19146970; DOI=10.1016/j.fgb.2008.12.003; RA Wortman J.R., Gilsenan J.M., Joardar V., Deegan J., Clutterbuck J., RA Andersen M.R., Archer D., Bencina M., Braus G., Coutinho P., RA von Dohren H., Doonan J., Driessen A.J., Durek P., Espeso E., RA Fekete E., Flipphi M., Estrada C.G., Geysens S., Goldman G., RA de Groot P.W., Hansen K., Harris S.D., Heinekamp T., Helmstaedt K., RA Henrissat B., Hofmann G., Homan T., Horio T., Horiuchi H., James S., RA Jones M., Karaffa L., Karanyi Z., Kato M., Keller N., Kelly D.E., RA Kiel J.A., Kim J.M., van der Klei I.J., Klis F.M., Kovalchuk A., RA Krasevec N., Kubicek C.P., Liu B., Maccabe A., Meyer V., Mirabito P., RA Miskei M., Mos M., Mullins J., Nelson D.R., Nielsen J., Oakley B.R., RA Osmani S.A., Pakula T., Paszewski A., Paulsen I., Pilsyk S., Pocsi I., RA Punt P.J., Ram A.F., Ren Q., Robellet X., Robson G., Seiboth B., RA van Solingen P., Specht T., Sun J., Taheri-Talesh N., Takeshita N., RA Ussery D., vanKuyk P.A., Visser H., van de Vondervoort P.J., RA de Vries R.P., Walton J., Xiang X., Xiong Y., Zeng A.P., Brandt B.W., RA Cornell M.J., van den Hondel C.A., Visser J., Oliver S.G., Turner G.; RT "The 2008 update of the Aspergillus nidulans genome annotation: a RT community effort."; RL Fungal Genet. Biol. 46:S2-13(2009). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; BN001308; CBF88902.1; -; Genomic_DNA. DR EnsemblFungi; CADANIAT00001938; CADANIAP00001938; CADANIAG00001938. DR EuPathDB; FungiDB:AN9436; -. DR InParanoid; C8VRA9; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000000560; Chromosome VIII. DR GO; GO:0000439; C:core TFIIH complex; IEA:EnsemblFungi. DR GO; GO:0005829; C:cytosol; IEA:EnsemblFungi. DR GO; GO:0005675; C:holo TFIIH complex; IEA:EnsemblFungi. DR GO; GO:0000112; C:nucleotide-excision repair factor 3 complex; IEA:EnsemblFungi. DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:EnsemblFungi. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0043141; F:ATP-dependent 5'-3' DNA helicase activity; IEA:EnsemblFungi. DR GO; GO:0003684; F:damaged DNA binding; IEA:EnsemblFungi. DR GO; GO:0000717; P:nucleotide-excision repair, DNA duplex unwinding; IEA:EnsemblFungi. DR GO; GO:0033683; P:nucleotide-excision repair, DNA incision; IEA:EnsemblFungi. DR GO; GO:0070816; P:phosphorylation of RNA polymerase II C-terminal domain; IEA:EnsemblFungi. DR GO; GO:0045951; P:positive regulation of mitotic recombination; IEA:EnsemblFungi. DR GO; GO:0010525; P:regulation of transposition, RNA-mediated; IEA:EnsemblFungi. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:EnsemblFungi. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CBF88902.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000000560}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:CBF88902.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CBF88902.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CBF88902.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000000560}. FT DOMAIN 7 295 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 248 275 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 791 AA; 90614 MW; D7D4E2F16B86E962 CRC64; MKFFIDDLPV LFPYPRIYPE QYAYMCDLKK TLDAGGHCVL EMPSGTGKTV TLLSLIVAYQ QHYPEHRKLI YCSRTMSEIE KALAELRELM KFRSEQLGYT EDFRALGLTS RKNLCLHPSV KREKSGTVVD ARCRSLTAGF VKEKKEKGED VELCVYHENL DLLEPHNLVP PGVFTLDGLL NYGEQHKQCP YFSARRMMPY CNVIIYSYHY LLDPKIAERV SKEFSKDCIV VFDEAHNIDN VCIESLSIDI TEDSLRKATR GANNLERKIQ DVKSSDAEKL NNEYMKLVEG LREAEQARDE DQFISNPVLP DDLLKEAVPG NIRRAEHFVA FLKRFIEYLK TRMKVTHTIS ETPLSFLNHV KELTFIERKP LRFCAERLTS LVRTLELINI EDYQPLQEVA TFATLVSTYD KGFLLILEPF ESEAATVPNP VLHFTCLDAA IAIKPVFDRF SSVVITSGTL SPLEMYPKML GFTTVMQESY SMTLARRSFL PMIVTRGSDQ AQISSSFQIR NDPGVVRNYG NIVLEFSRIT PDGVVVFFPS YLYMESIISM WQGMGILDSI WNYKLILVET PDAQESSLAL ETYRTACCNG RGALLFCVAR GKVSEGIDFD HHYGRAVLCI GVPFQYTESR ILKARLEFLR ENYRIRENDF LSFDAMRHAA QCLGRVLRGK DDYGIMVLAD RRFQKKRNQL PKWISQALLE SETNLSTDMA VATAKNFLRT MAQPFKAKDQ EGISTWSLAD LERHRQKQIQ EQERLQRETF AQGDRTNGSR NGAGDEFDEG IDEDLMMLDA Q // ID C9SE89_VERA1 Unreviewed; 756 AA. AC C9SE89; DT 24-NOV-2009, integrated into UniProtKB/TrEMBL. DT 24-NOV-2009, sequence version 1. DT 11-MAY-2016, entry version 44. DE SubName: Full=DNA repair helicase RAD3 {ECO:0000313|EMBL:EEY17313.1}; GN ORFNames=VDBG_03422 {ECO:0000313|EMBL:EEY17313.1}; OS Verticillium alfalfae (strain VaMs.102 / ATCC MYA-4576 / FGSC 10136) OS (Verticillium wilt of alfalfa) (Verticillium albo-atrum). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; OC Sordariomycetes; Hypocreomycetidae; Glomerellales; OC Plectosphaerellaceae; Verticillium. OX NCBI_TaxID=526221 {ECO:0000313|Proteomes:UP000008698}; RN [1] {ECO:0000313|Proteomes:UP000008698} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=VaMs.102 / ATCC MYA-4576 / FGSC 10136 RC {ECO:0000313|Proteomes:UP000008698}; RX PubMed=21829347; DOI=10.1371/journal.ppat.1002137; RA Klosterman S.J., Subbarao K.V., Kang S., Veronese P., Gold S.E., RA Thomma B.P.H.J., Chen Z., Henrissat B., Lee Y.-H., Park J., RA Garcia-Pedrajas M.D., Barbara D.J., Anchieta A., de Jonge R., RA Santhanam P., Maruthachalam K., Atallah Z., Amyotte S.G., Paz Z., RA Inderbitzin P., Hayes R.J., Heiman D.I., Young S., Zeng Q., Engels R., RA Galagan J., Cuomo C.A., Dobinson K.F., Ma L.-J.; RT "Comparative genomics yields insights into niche adaptation of plant RT vascular wilt pathogens."; RL PLoS Pathog. 7:E1002137-E1002137(2011). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; DS985216; EEY17313.1; -; Genomic_DNA. DR RefSeq; XP_003007283.1; XM_003007237.1. DR STRING; 526221.XP_003007283.1; -. DR EnsemblFungi; EEY17313; EEY17313; VDBG_03422. DR GeneID; 9533366; -. DR KEGG; val:VDBG_03422; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR KO; K10844; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000008698; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EEY17313.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000008698}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EEY17313.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EEY17313.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EEY17313.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000008698}. FT DOMAIN 1 248 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 214 241 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 756 AA; 86534 MW; F10ED61B4B99FF34 CRC64; MPSGTGKTVS LLSLIVAYQQ HYPEHRKLIY CSRTMSEIEK ALAELRELMK YRTEQLGQEE EFRGLGLTSR KNLCLHPSVK REKSGSVVDA RCRSLTAGFV KEKKDKGENV DVCVYHDNLD LLEPHNLIPN GVWTFDGLLR YGEQHKQCPY FTSRRMMQYC NVIIYSYHYL LDPKIAERVS RELSKDCIVV FDEAHNIDNV CIESLSTDIT EDSLRKAARG AQNLDRKIAE MKQTDQEQLQ NEYLKLVEGL RDAGEARQED AFMSNPARLT DGKALPDDLL NEAVPGNIRR AEHFVAFLKR FIEYLKTRMK VRNTISETPP SFLAHLKEFT FIEKKPLKFC AERLTSLVRT LELTNIEDYQ PLQEVATFAT LVATYEKGFL LILEPFESEA AEVPNPVLHF TCLDAAIAIK PVFDRFSSVI ITSGTISPLE MYPKMLGFST VVQESYSMTL ARRSFLPMIV TRGSDQASVS TSFQVRNEPS VVRNYGSLLT EFAKITPDGM VVFFPSYLYM ESIISMWQGM GILDEVWKYK LILVETPDAQ ETSLALETYR TACCNGRGAV LLCVARGKVS EGIDFDHQYG RAVLNIGVPF QYTESRILKA RLEFLRETYR IRENDFLSFD AMRHAAQCLG RVLRGKDDYG VMVLADRRFQ KKRVQLPKWI NQGLLDADTN LSTDMAVSSA RRFLKQMAQP FRAKDQEGVS TWSYEDLMRH KEKTEMDRIR DLEDAANKNE QTQEFGGDDY GMDDDLDQDL MEIDGF // ID D0NSC7_PHYIT Unreviewed; 763 AA. AC D0NSC7; DT 15-DEC-2009, integrated into UniProtKB/TrEMBL. DT 15-DEC-2009, sequence version 1. DT 11-MAY-2016, entry version 44. DE SubName: Full=TFIIH basal transcription factor complex helicase subunit {ECO:0000313|EMBL:EEY64472.1}; GN ORFNames=PITG_15696 {ECO:0000313|EMBL:EEY64472.1}; OS Phytophthora infestans (strain T30-4) (Potato late blight fungus). OC Eukaryota; Stramenopiles; Oomycetes; Peronosporales; Phytophthora. OX NCBI_TaxID=403677 {ECO:0000313|Proteomes:UP000006643}; RN [1] {ECO:0000313|Proteomes:UP000006643} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=T30-4 {ECO:0000313|Proteomes:UP000006643}; RX PubMed=19741609; DOI=10.1038/nature08358; RG The Broad Institute Genome Sequencing Platform; RA Haas B.J., Kamoun S., Zody M.C., Jiang R.H., Handsaker R.E., RA Cano L.M., Grabherr M., Kodira C.D., Raffaele S., Torto-Alalibo T., RA Bozkurt T.O., Ah-Fong A.M., Alvarado L., Anderson V.L., RA Armstrong M.R., Avrova A., Baxter L., Beynon J., Boevink P.C., RA Bollmann S.R., Bos J.I., Bulone V., Cai G., Cakir C., Carrington J.C., RA Chawner M., Conti L., Costanzo S., Ewan R., Fahlgren N., RA Fischbach M.A., Fugelstad J., Gilroy E.M., Gnerre S., Green P.J., RA Grenville-Briggs L.J., Griffith J., Grunwald N.J., Horn K., RA Horner N.R., Hu C.H., Huitema E., Jeong D.H., Jones A.M., Jones J.D., RA Jones R.W., Karlsson E.K., Kunjeti S.G., Lamour K., Liu Z., Ma L., RA Maclean D., Chibucos M.C., McDonald H., McWalters J., Meijer H.J., RA Morgan W., Morris P.F., Munro C.A., O'Neill K., Ospina-Giraldo M., RA Pinzon A., Pritchard L., Ramsahoye B., Ren Q., Restrepo S., Roy S., RA Sadanandom A., Savidor A., Schornack S., Schwartz D.C., Schumann U.D., RA Schwessinger B., Seyer L., Sharpe T., Silvar C., Song J., RA Studholme D.J., Sykes S., Thines M., van de Vondervoort P.J., RA Phuntumart V., Wawra S., Weide R., Win J., Young C., Zhou S., Fry W., RA Meyers B.C., van West P., Ristaino J., Govers F., Birch P.R., RA Whisson S.C., Judelson H.S., Nusbaum C.; RT "Genome sequence and analysis of the Irish potato famine pathogen RT Phytophthora infestans."; RL Nature 461:393-398(2009). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; DS028157; EEY64472.1; -; Genomic_DNA. DR RefSeq; XP_002897975.1; XM_002897929.1. DR UniGene; Pin.10768; -. DR EnsemblProtists; PITG_15696T0; PITG_15696T0; PITG_15696. DR GeneID; 9475445; -. DR KEGG; pif:PITG_15696; -. DR EuPathDB; FungiDB:PITG_15696; -. DR HOGENOM; HOG000205390; -. DR InParanoid; D0NSC7; -. DR KO; K10844; -. DR OMA; KAMGRRQ; -. DR Proteomes; UP000006643; Partially assembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EEY64472.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000006643}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EEY64472.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EEY64472.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EEY64472.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000006643}. FT DOMAIN 7 273 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 763 AA; 86547 MW; E02EA694AB2EE39C CRC64; MKVDIDGLEV VFPYERMYSE QLQYMRELKR ALDAQGHCML EMPTGTGKTV SLLSLVLAYK AAHPTAGKLV YCTRTVPEMA KCVEEIKKLI KYREHYYGDK AQVTAVCLSS RRNMCVHPRV MAHADGEDVD GQCRKMTASW VETCSFYENY DARKSNDTVL PPGVYSVDDL KELGVKKGWC PYFLTRYVVT FADVVVYNYQ YMLDPKVSQL VSRSFEKESI VVFDEAHNID NVCIEALSVD LDRRSLDRAS RNLTTLSGQV NKLKQADKSR LDAEYRRLVE GLRSSNAVVA PSYTDPATNQ AIDTSNDIMI ANPVLPDDVL DEAIPGNIRR AEHFVAFMRR LIEYLRQRIR VRQVESETPQ AFLHHLHQAI NMEIKPMKFC YTRLNSLLRT LEVTNLEEYN SLTDVADFAT LVATYAEGFM LIIEPFDSAS GVHDPVLQLS CLDASLAIRP VFERFSSVVI TSGTLSPIDL YPRLLNFNPV IRESLPMSVY RSSICPLVIT RGSDQMPVST KFDLRDDLSV VRNYGTLLLE MAACTPDGMV CFFPSYLYME KIIGQWDSLG VLKRVLSSKL LFIETKDIVE TTLALDNYKK ACDCGRGAIF FSVARGKVAE GIDFDRHYGR AVILFGIPFQ YTLSNTLRAR LEYLRYTHQI REGDFLTFDA LRQAAQCAGR VLRSKTDYGL VIFADSRYNR ADKRTKLPPW ILQFLVNSHL NLSVDMAVFM AKKYLSLMAQ PVDESTSVNS ILLDADGVAK WLGKHPKEDE SMQ // ID D2VP13_NAEGR Unreviewed; 753 AA. AC D2VP13; DT 02-MAR-2010, integrated into UniProtKB/TrEMBL. DT 02-MAR-2010, sequence version 1. DT 11-MAY-2016, entry version 42. DE SubName: Full=DNA repair helicase UVH6 {ECO:0000313|EMBL:EFC41518.1}; GN ORFNames=NAEGRDRAFT_80698 {ECO:0000313|EMBL:EFC41518.1}; OS Naegleria gruberi (Amoeba). OC Eukaryota; Heterolobosea; Schizopyrenida; Vahlkampfiidae; Naegleria. OX NCBI_TaxID=5762 {ECO:0000313|Proteomes:UP000006671}; RN [1] {ECO:0000313|EMBL:EFC41518.1, ECO:0000313|Proteomes:UP000006671} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=NEG-M {ECO:0000313|EMBL:EFC41518.1, RC ECO:0000313|Proteomes:UP000006671}; RX PubMed=20211133; DOI=10.1016/j.cell.2010.01.032; RA Fritz-Laylin L.K., Prochnik S.E., Ginger M.L., Dacks J.B., RA Carpenter M.L., Field M.C., Kuo A., Paredez A., Chapman J., Pham J., RA Shu S., Neupane R., Cipriano M., Mancuso J., Tu H., Salamov A., RA Lindquist E., Shapiro H., Lucas S., Grigoriev I.V., Cande W.Z., RA Fulton C., Rokhsar D.S., Dawson S.C.; RT "The genome of Naegleria gruberi illuminates early eukaryotic RT versatility."; RL Cell 140:631-642(2010). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GG738885; EFC41518.1; -; Genomic_DNA. DR STRING; 5762.XP_002674262.1; -. DR EnsemblProtists; EFC41518; EFC41518; NAEGRDRAFT_80698. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; D2VP13; -. DR OMA; DEVWKYK; -. DR Proteomes; UP000006671; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EFC41518.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000006671}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EFC41518.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EFC41518.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EFC41518.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000006671}. FT DOMAIN 1 264 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 236 263 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 753 AA; 85148 MW; 1135DF4B4460E3F2 CRC64; MPSGTGKTIS LLSLITSYQL TEEGKSRKLI YCTRTVPEME KVLEELGSLI EYRKKYTDSP IIGVGLSSRK NLCIHPKSQS FLHDGAQVDS VCRGLTASWL RAEAKEKVES SNGTIQPVIS NNNATATVDD IELCNYFERF IEANPTDTIL PNGVYTMRDL KVFGKKKGWC PYFLSRRAIE YANVVVYSYS YLLDPKISSI ISKNLPANSI VVFDEAHNID NVCIEALSIN IDRDILGVAK SNLTKLEENI ANMEKVNSQR LQEEYRRLVD GLGAVGVGRS SDVIRSDDEL LSNPVLPGDI MTEAVPGNIR KAHHFVKFMK RFATHVNKRL QTQKSVNETP EQFLNHVLEN IDIDSRSLRF CSERLLSLMN TLEIKNIYEF NGIKIIMDFA TLIGTYQEGF VIIIEPHDPR TPTNPDPVLQ FSCMDASLAI SKPIFGRFKT VVLTSGTLSP LDMYPKLLKF KPIISKSLEM TLTRECICPL VLTRGSDQVA VTTKYRFRND ASVQRNYGSL LLELSKYIPD GIVCFFTSYQ YMEDIVSFWN SVGLLSSITN HKLVFIETPN TAETAIALEN YRKACDCGRG AIFFSIARGK VAEGIDFDGH YGRCVVMIGV PFQNTESKIL KARLNYLRQN FAIKEETFLT FDALRHASQC IGRVIRNKAD YGIMVLADKR YNQPDKRNKL PKWIAKQIKD TYLNLSTDMI IGIARKYLKE MAQPYTATNQ LLGPEEIEQR SKKRNFEDVT DLPTEDSQPP QKK // ID D3BKQ8_POLPA Unreviewed; 694 AA. AC D3BKQ8; DT 23-MAR-2010, integrated into UniProtKB/TrEMBL. DT 23-MAR-2010, sequence version 1. DT 11-MAY-2016, entry version 32. DE SubName: Full=Transcription factor IIH component {ECO:0000313|EMBL:EFA78488.1}; GN Name=repD {ECO:0000313|EMBL:EFA78488.1}; GN ORFNames=PPL_09140 {ECO:0000313|EMBL:EFA78488.1}; OS Polysphondylium pallidum (Cellular slime mold). OC Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Polysphondylium. OX NCBI_TaxID=13642 {ECO:0000313|Proteomes:UP000001396}; RN [1] {ECO:0000313|Proteomes:UP000001396} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=PN500 {ECO:0000313|Proteomes:UP000001396}; RA Gloeckner G., Schaap P., Noegel A.A., Felder M., Eichinger L., RA Heidel A.J., Platzer M.; RT "Living fossils from the dawn of multicellularity."; RL Submitted (DEC-2009) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:EFA78488.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ADBJ01000038; EFA78488.1; -; Genomic_DNA. DR EnsemblProtists; EFA78488; EFA78488; PPL_09140. DR InParanoid; D3BKQ8; -. DR Proteomes; UP000001396; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 1. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 3. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000001396}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000001396}. FT DOMAIN 7 291 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 694 AA; 77895 MW; 8901C8A3BC17FCD7 CRC64; MKFKIDELDV YFPYAYIYPE QYNYMVALKK ALDAGGPCML EMPSGTGKTV SLLSLISSYQ VVHPTAKLIY CSRTVPEIEQ AMEEARRVLT YRNAELGESA PKTLALAMTS RLIFSYQYML DPKISSLVSS QFASNSIVVF DEAHNIDNVC INALSINIDN QTIENATKNL TKINNGIENL KKVDAERLKN EYVKLVQGLA RSGDTMSADP LLPNEVINEV VPGNIRKAEH FVSVLRRFID YLRSRLRTQM VVSESPLSFL RSLSQLTTIS AKTLRFCSSR LSSLLRTLQI SDLNQFSSIS VIADFATLVG TYGNGFIIII EPYDQKTPNQ YDPIFQFCCL DASIGMKPIF DKYKSVIITS GTLSPIDIYQ KILNFRPSLV EQLSMSLHRS CICPCILTRG SDQISVSTKF DVRADTAVIR NYGALLVEMS AIVPDGIICF FTSYSYMEQI VSVWNEMGLL NNILNNKLIF VETSDAAESA LALQNYKKAC DSGRGAVLLS VARGKVSEGI DFDNQYGRCV ILYGIPYINT ESRVLRARLE YQRDKYQIKE NEFLTFDAMR TASQCVGRVI RGKSDYGIMI FADKRYNRLD KRNKLPQWIL QFCQPQHLNL STDMAVALSR AFLKDMAQPY SREEQLGKSL WNLQNLEKHQ EKIANTTNTT SPTTLLLGNG HANGNGNGNL NGTTTTTTNT QLPK // ID D3Z700_MOUSE Unreviewed; 508 AA. AC D3Z700; DT 20-APR-2010, integrated into UniProtKB/TrEMBL. DT 20-APR-2010, sequence version 1. DT 11-MAY-2016, entry version 45. DE SubName: Full=TFIIH basal transcription factor complex helicase XPD subunit {ECO:0000313|Ensembl:ENSMUSP00000104101}; GN Name=Ercc2 {ECO:0000313|Ensembl:ENSMUSP00000104101, GN ECO:0000313|MGI:MGI:95413}; OS Mus musculus (Mouse). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; OC Muroidea; Muridae; Murinae; Mus; Mus. OX NCBI_TaxID=10090 {ECO:0000313|Ensembl:ENSMUSP00000104101, ECO:0000313|Proteomes:UP000000589}; RN [1] {ECO:0000313|Ensembl:ENSMUSP00000104101, ECO:0000313|Proteomes:UP000000589} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=C57BL/6J {ECO:0000313|Ensembl:ENSMUSP00000104101, RC ECO:0000313|Proteomes:UP000000589}; RX PubMed=19468303; DOI=10.1371/journal.pbio.1000112; RA Church D.M., Goodstadt L., Hillier L.W., Zody M.C., Goldstein S., RA She X., Bult C.J., Agarwala R., Cherry J.L., DiCuccio M., Hlavina W., RA Kapustin Y., Meric P., Maglott D., Birtle Z., Marques A.C., Graves T., RA Zhou S., Teague B., Potamousis K., Churas C., Place M., Herschleb J., RA Runnheim R., Forrest D., Amos-Landgraf J., Schwartz D.C., Cheng Z., RA Lindblad-Toh K., Eichler E.E., Ponting C.P.; RT "Lineage-specific biology revealed by a finished genome assembly of RT the mouse."; RL PLoS Biol. 7:E1000112-E1000112(2009). RN [2] {ECO:0000213|PubMed:21183079} RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. RX PubMed=21183079; DOI=10.1016/j.cell.2010.12.001; RA Huttlin E.L., Jedrychowski M.P., Elias J.E., Goswami T., Rad R., RA Beausoleil S.A., Villen J., Haas W., Sowa M.E., Gygi S.P.; RT "A tissue-specific atlas of mouse protein phosphorylation and RT expression."; RL Cell 143:1174-1189(2010). RN [3] {ECO:0000313|Ensembl:ENSMUSP00000104101} RP IDENTIFICATION. RC STRAIN=C57BL/6J {ECO:0000313|Ensembl:ENSMUSP00000104101}; RG Ensembl; RL Submitted (MAY-2011) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00051130}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00556201}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00051146}. CC -!- CAUTION: The sequence shown here is derived from an Ensembl CC automatic analysis pipeline and should be considered as CC preliminary data. {ECO:0000313|Ensembl:ENSMUSP00000104101}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AC118017; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR ProteinModelPortal; D3Z700; -. DR STRING; 10090.ENSMUSP00000054380; -. DR PaxDb; D3Z700; -. DR Ensembl; ENSMUST00000108461; ENSMUSP00000104101; ENSMUSG00000030400. DR UCSC; uc012fbc.1; mouse. DR MGI; MGI:95413; Ercc2. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR GeneTree; ENSGT00550000075092; -. DR HOGENOM; HOG000205390; -. DR NextBio; 35551574; -. DR Proteomes; UP000000589; Chromosome 7. DR Bgee; D3Z700; -. DR ExpressionAtlas; D3Z700; baseline and differential. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00491; HELICc2; 1. DR TIGRFAMs; TIGR00604; rad3; 1. PE 1: Evidence at protein level; KW ATP-binding {ECO:0000256|SAAS:SAAS00442371}; KW Complete proteome {ECO:0000313|Proteomes:UP000000589}; KW Helicase {ECO:0000256|SAAS:SAAS00442371}; KW Hydrolase {ECO:0000256|SAAS:SAAS00442371}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00442371}; KW Nucleus {ECO:0000256|SAAS:SAAS00442313}; KW Proteomics identification {ECO:0000213|MaxQB:D3Z700, KW ECO:0000213|PeptideAtlas:D3Z700}; KW Reference proteome {ECO:0000313|Proteomes:UP000000589}. FT DOMAIN 290 434 HELICc2. {ECO:0000259|SMART:SM00491}. SQ SEQUENCE 508 AA; 57971 MW; B1DFD6CCCB43E86F CRC64; MKTLDRCQSN LDTLQKTVLR IKETDEQRLR DEYRRLVEGL REASVARETD AHLANPVLPD EVLQEAVPGS IRTAEHFLGF LRRLLEYVKW RLRVQHVVQE SPPAFLSGLA QRVCIQRKPL RFCAERLRSL LHTLEIADLA DFSPLTLLAN FATLVSTYAK GFTIIIEPFD DRTPTIANPV LHFSCMDASL AIKPVFERFQ SVIITSGTLS PLDIYPKILD FHPVTMATFT MTLARVCLCP MIIGRGNDQV AISSKFETRE DIAVIRNYGN LLLEMSAVVP DGIVAFFTSY QYMESTVASW YEQGILENIQ RNKLLFIETQ DGAETSVALE KYQEACENGR GAILLSVARG KVSEGIDFVH HYGRAVIMFG VPYVYTQSRI LKARLEYLRD QFQIRENDFL TFDAMRHAAQ CVGRAIRGKT DYGLMVFADK RFARADKRGK LPRWIQEHLT DSNLNLTVDE GVQVAKYFLR QMAQPFHRED QLGLSLLSLE QLQSEETLQR IEQIAQQL // ID D3ZEG9_RAT Unreviewed; 760 AA. AC D3ZEG9; DT 20-APR-2010, integrated into UniProtKB/TrEMBL. DT 20-APR-2010, sequence version 1. DT 11-MAY-2016, entry version 55. DE SubName: Full=Protein Ercc2 {ECO:0000313|Ensembl:ENSRNOP00000024247}; DE SubName: Full=RCG54110 {ECO:0000313|EMBL:EDM08205.1}; GN Name=Ercc2 {ECO:0000313|Ensembl:ENSRNOP00000024247, GN ECO:0000313|RGD:1309109}; GN ORFNames=rCG_54110 {ECO:0000313|EMBL:EDM08205.1}; OS Rattus norvegicus (Rat). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; OC Muroidea; Muridae; Murinae; Rattus. OX NCBI_TaxID=10116 {ECO:0000313|Ensembl:ENSRNOP00000024247, ECO:0000313|Proteomes:UP000002494}; RN [1] {ECO:0000313|Ensembl:ENSRNOP00000024247, ECO:0000313|Proteomes:UP000002494} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Brown Norway {ECO:0000313|Ensembl:ENSRNOP00000024247, RC ECO:0000313|Proteomes:UP000002494}; RX PubMed=15057822; DOI=10.1038/nature02426; RG Rat Genome Sequencing Project Consortium; RA Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., RA Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., RA Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., RA Morgan M., Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., RA Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., RA Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., RA Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., RA Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., RA Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., RA Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., RA Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., RA Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., RA Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., RA Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., RA Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., RA D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., RA Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., RA Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., RA Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., RA Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., RA Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., RA Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., RA Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., RA Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., RA Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., RA Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., RA Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., RA Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., RA Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., RA Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., RA Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., RA Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., RA Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., RA Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., RA Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., RA Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., RA Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., RA Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., RA Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., RA Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., RA Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., RA Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., RA Collins F.S.; RT "Genome sequence of the Brown Norway rat yields insights into RT mammalian evolution."; RL Nature 428:493-521(2004). RN [2] {ECO:0000313|EMBL:EDM08205.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=BN {ECO:0000313|EMBL:EDM08205.1}; RX PubMed=15632090; DOI=10.1101/gr.2889405; RA Florea L., Di Francesco V., Miller J., Turner R., Yao A., Harris M., RA Walenz B., Mobarry C., Merkulov G.V., Charlab R., Dew I., Deng Z., RA Istrail S., Li P., Sutton G.; RT "Gene and alternative splicing annotation with AIR."; RL Genome Res. 15:54-66(2005). RN [3] {ECO:0000313|EMBL:EDM08205.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=BN {ECO:0000313|EMBL:EDM08205.1}; RA Mural R.J., Li P.W., Adams M.D., Amanatides P.G., Baden-Tillson H., RA Barnstead M., Chin S.H., Dew I., Evans C.A., Ferriera S., Flanigan M., RA Fosler C., Glodek A., Gu Z., Holt R.A., Jennings D., Kraft C.L., RA Lu F., Nguyen T., Nusskern D.R., Pfannkoch C.M., Sitter C., RA Sutton G.G., Venter J.C., Wang Z., Woodage T., Zheng X.H., Zhong F.; RL Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases. RN [4] {ECO:0000313|Ensembl:ENSRNOP00000024247} RP IDENTIFICATION. RC STRAIN=Brown Norway {ECO:0000313|Ensembl:ENSRNOP00000024247}; RG Ensembl; RL Submitted (JUL-2011) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AABR07002675; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AABR07002676; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; CH473979; EDM08205.1; -; Genomic_DNA. DR RefSeq; NP_001166280.1; NM_001172809.1. DR UniGene; Rn.41871; -. DR STRING; 10116.ENSRNOP00000024247; -. DR Ensembl; ENSRNOT00000024246; ENSRNOP00000024247; ENSRNOG00000017753. DR GeneID; 308415; -. DR KEGG; rno:308415; -. DR CTD; 2068; -. DR RGD; 1309109; Ercc2. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR GeneTree; ENSGT00550000075092; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG70W3CM; -. DR TreeFam; TF101232; -. DR Reactome; R-RNO-112382; Formation of RNA Pol II elongation complex. DR Reactome; R-RNO-113418; Formation of the Early Elongation Complex. DR Reactome; R-RNO-5696395; Formation of Incision Complex in GG-NER. DR Reactome; R-RNO-5696400; Dual Incision in GG-NER. DR Reactome; R-RNO-674695; RNA Polymerase II Pre-transcription Events. DR Reactome; R-RNO-6781823; Formation of TC-NER Pre-Incision Complex. DR Reactome; R-RNO-6782135; Dual incision in TC-NER. DR Reactome; R-RNO-6782210; Gap-filling DNA repair synthesis and ligation in TC-NER. DR Reactome; R-RNO-72086; mRNA Capping. DR Reactome; R-RNO-73762; RNA Polymerase I Transcription Initiation. DR Reactome; R-RNO-73772; RNA Polymerase I Promoter Escape. DR Reactome; R-RNO-73776; RNA Polymerase II Promoter Escape. DR Reactome; R-RNO-73777; RNA Polymerase I Chain Elongation. DR Reactome; R-RNO-73779; RNA Polymerase II Transcription Pre-Initiation And Promoter Opening. DR Reactome; R-RNO-73863; RNA Polymerase I Transcription Termination. DR Reactome; R-RNO-75953; RNA Polymerase II Transcription Initiation. DR Reactome; R-RNO-75955; RNA Polymerase II Transcription Elongation. DR Reactome; R-RNO-76042; RNA Polymerase II Transcription Initiation And Promoter Clearance. DR Reactome; R-RNO-77075; RNA Pol II CTD phosphorylation and interaction with CE. DR NextBio; 658821; -. DR Proteomes; UP000002494; Chromosome 1. DR GO; GO:0000439; C:core TFIIH complex; IDA:RGD. DR GO; GO:0019907; C:cyclin-dependent protein kinase activating kinase holoenzyme complex; IEA:Ensembl. DR GO; GO:0005737; C:cytoplasm; IEA:Ensembl. DR GO; GO:0005675; C:holo TFIIH complex; IEA:Ensembl. DR GO; GO:0071817; C:MMXD complex; IEA:Ensembl. DR GO; GO:0043139; F:5'-3' DNA helicase activity; IEA:Ensembl. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0008353; F:RNA polymerase II carboxy-terminal domain kinase activity; IEA:Ensembl. DR GO; GO:0007568; P:aging; IEA:Ensembl. DR GO; GO:0006915; P:apoptotic process; IEA:Ensembl. DR GO; GO:0030282; P:bone mineralization; IEA:Ensembl. DR GO; GO:0008283; P:cell proliferation; IEA:Ensembl. DR GO; GO:0032289; P:central nervous system myelin formation; IEA:Ensembl. DR GO; GO:0007059; P:chromosome segregation; IEA:Ensembl. DR GO; GO:0040016; P:embryonic cleavage; IEA:Ensembl. DR GO; GO:0043249; P:erythrocyte maturation; IEA:Ensembl. DR GO; GO:0030198; P:extracellular matrix organization; IEA:Ensembl. DR GO; GO:0035315; P:hair cell differentiation; IEA:Ensembl. DR GO; GO:0048820; P:hair follicle maturation; IEA:Ensembl. DR GO; GO:0060218; P:hematopoietic stem cell differentiation; IEA:Ensembl. DR GO; GO:0001701; P:in utero embryonic development; IEA:Ensembl. DR GO; GO:0035264; P:multicellular organism growth; IEA:Ensembl. DR GO; GO:0033683; P:nucleotide-excision repair, DNA incision; IEA:Ensembl. DR GO; GO:0043388; P:positive regulation of DNA binding; IEA:Ensembl. DR GO; GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IEA:Ensembl. DR GO; GO:0009791; P:post-embryonic development; IEA:Ensembl. DR GO; GO:1901990; P:regulation of mitotic cell cycle phase transition; IEA:Ensembl. DR GO; GO:0001666; P:response to hypoxia; IEP:RGD. DR GO; GO:0006979; P:response to oxidative stress; IEA:Ensembl. DR GO; GO:0021510; P:spinal cord development; IEA:Ensembl. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:Ensembl. DR GO; GO:0006283; P:transcription-coupled nucleotide-excision repair; IEA:Ensembl. DR GO; GO:0009650; P:UV protection; IEA:Ensembl. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 1: Evidence at protein level; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000002494}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Proteomics identification {ECO:0000213|PeptideAtlas:D3ZEG9}; KW Reference proteome {ECO:0000313|Proteomes:UP000002494}. FT DOMAIN 7 283 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 760 AA; 86814 MW; AC4316E1F21BCF67 CRC64; MKLNVDGLLV YFPYDYIYPE QFSYMLELKR TLDAKGHGVL EMPSGTGKTV SLLALIVAYQ RAYPLEVTKL IYCSRTVPEI EKVIEELRKL LSFYEQQEGE KLPFLGLALS SRKNLCIHPE VTPLRFGKDV DGKCHSLTAS YVRAQYQQDA SLPHCRFYEE FDTHGRQVPL PAGIYNLDDL KALGQRQGWC PYFLARYSIL HANVVVYSYH YLLDPKIADL VSKELARKAV VVFDEAHNID NVCIDSMSVN LTRRTLDRCQ SNLDTLQKTV LRIKETDEQR LRDEYRRLVE GLREASAARE TDAHLANPVL PDEVLQEAVP GSIRTAEHFL GFLRRLLEYV KWRLRVQHVV QESPPAFLSG LAQRVCIQRK PLRFCAERLR SLLHTLEIAD LADFSPLTLL ANFATLVSTY AKGFTIIIEP FDDRTPTITN PILHFSCMDA SLAIKPVFER FQSVIITSGT LSPLDIYPKI LDFHPVTMAT FTMTLARVCL CPMIIGRGND QVAISSKFET REDIAVIRNY GNLLLEMSAV VPDGIVAFFT SYQYMESTVA SWYEQGILEN IQRNKLLFIE TQDGAETSVA LEKYQEACEN GRGAILLSVA RGKVSEGIDF VHHYGRAVIM FGVPYVYTQS RILKARLEYL RDQFQIREND FLTFDAMRHA AQCVGRAIRG KTDYGLMVFA DKRFARADKR GKLPRWIQEH LTDSNLNLTV DEGVQVAKYF LRQMAQPFHR EDQLGLSLLS LEQLQSEETL QRIEQIAQQL // ID D4AV80_ARTBC Unreviewed; 749 AA. AC D4AV80; DT 18-MAY-2010, integrated into UniProtKB/TrEMBL. DT 18-MAY-2010, sequence version 1. DT 11-MAY-2016, entry version 34. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EFE33002.1}; GN ORFNames=ARB_00089 {ECO:0000313|EMBL:EFE33002.1}; OS Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OS (Trichophyton mentagrophytes). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; OC Eurotiomycetidae; Onygenales; Arthrodermataceae; Arthroderma. OX NCBI_TaxID=663331 {ECO:0000313|EMBL:EFE33002.1, ECO:0000313|Proteomes:UP000008866}; RN [1] {ECO:0000313|Proteomes:UP000008866} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC MYA-4681 / CBS 112371 {ECO:0000313|Proteomes:UP000008866}; RX PubMed=21247460; DOI=10.1186/gb-2011-12-1-r7; RA Burmester A., Shelest E., Gloeckner G., Heddergott C., Schindler S., RA Staib P., Heidel A., Felder M., Petzold A., Szafranski K., RA Feuermann M., Pedruzzi I., Priebe S., Groth M., Winkler R., Li W., RA Kniemeyer O., Schroeckh V., Hertweck C., Hube B., White T.C., RA Platzer M., Guthke R., Heitman J., Woestemeyer J., Zipfel P.F., RA Monod M., Brakhage A.A.; RT "Comparative and functional genomics provide insights into the RT pathogenicity of dermatophytic fungi."; RL Genome Biol. 12:R7.1-R7.16(2011). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:EFE33002.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ABSU01000012; EFE33002.1; -; Genomic_DNA. DR RefSeq; XP_003013642.1; XM_003013596.1. DR STRING; 663331.XP_003013642.1; -. DR EnsemblFungi; EFE33002; EFE33002; ARB_00089. DR GeneID; 9519921; -. DR KEGG; abe:ARB_00089; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR KO; K10844; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000008866; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000008866}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000008866}. FT DOMAIN 1 254 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 207 234 {ECO:0000256|SAM:Coils}. FT COILED 236 259 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 749 AA; 85312 MW; 55480152A17C397D CRC64; MPSGTGKTIT LLALIVAYQQ HYPEHRKLIY CSRTMSEIEK ALSELRALMK YRSQKLGVVE DFRALGLTSR KNLCLHPSVK REKSGAVVDA RCRSLTAGFI KEKKEKGEDV ELCIYHENLD LLEPSNLVPP GVFTLDGLLK YGEQHKQCPY FSARRMMPYC NVIIYSYHYL LDPKIAERVS KELSRDSIIV FDEAHNIDNV CIESLSIDLT EDSLRKASRG ANNLERKIDD MKSSDADKLQ NEYQKLVEGL READEAREEE QLMANPVLPD DLLKESVPGN IRRAEHFVAF LKRFIEYLKT RMKVTHTISE TPLSFLSHLK DLTFIERKPL RFCAERLTSL VRTLELVNIE DYQPLQEVAT FATLAATYEK GFLLILEPFE SDTATVPNPI LHFTCLDAAI AIKPVFDRFS SVIITSGTLS PLEMYPKMLG FDAALQESYS MTLARRSFLP MIVTRGSDQA QISSSFQIRN DPGVVRNYGN MLLEFCRITP DGVVVFFPSY LYMESIISMW QGMGILDSVW NYKLILVETP DSQESSLALE TYRTACCNGR GAVLLCVARG KVSEGIDFDH HYGRTVLCIG VPFQYTESRI LKARLEFLRE NYRIRENDFL SFDALRHAAQ CLGRVLRGKD DYGVMVLADR RFQKKRNQLP KWISQAMLES ETNLSTDMAV ATAKSFLKSM AQPFKAKDQE GISTWSLEDL KRHLEKQKQE IEKTQGNKMA WDATNTGIAD TAMVDDDDFN EDLLAELES // ID D4JBM5_9FIRM Unreviewed; 803 AA. AC D4JBM5; DT 18-MAY-2010, integrated into UniProtKB/TrEMBL. DT 18-MAY-2010, sequence version 1. DT 11-MAY-2016, entry version 32. DE SubName: Full=Rad3-related DNA helicases {ECO:0000313|EMBL:CBK81746.1}; GN ORFNames=CC1_32000 {ECO:0000313|EMBL:CBK81746.1}; OS Coprococcus catus GD/7. OC Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; OC Coprococcus. OX NCBI_TaxID=717962 {ECO:0000313|EMBL:CBK81746.1, ECO:0000313|Proteomes:UP000008798}; RN [1] {ECO:0000313|EMBL:CBK81746.1, ECO:0000313|Proteomes:UP000008798} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=GD/7 {ECO:0000313|EMBL:CBK81746.1, RC ECO:0000313|Proteomes:UP000008798}; RG metaHIT consortium -- http://www.metahit.eu/; RA Pajon A., Turner K., Parkhill J., Duncan S., Flint H.; RT "The genome sequence of Coprococcus catus GD/7."; RL Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases. RN [2] {ECO:0000313|EMBL:CBK81746.1, ECO:0000313|Proteomes:UP000008798} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=GD/7 {ECO:0000313|EMBL:CBK81746.1, RC ECO:0000313|Proteomes:UP000008798}; RA Pajon A.; RL Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FP929038; CBK81746.1; -; Genomic_DNA. DR STRING; 717962.CC1_32000; -. DR EnsemblBacteria; CBK81746; CBK81746; CC1_32000. DR KEGG; cct:CC1_32000; -. DR PATRIC; 42887879; VBICopCat158046_3066. DR eggNOG; ENOG4107QX6; Bacteria. DR eggNOG; COG1199; LUCA. DR BioCyc; CCAT717962-WGS:GSLR-2795-MONOMER; -. DR Proteomes; UP000008798; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 4. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR014001; Helicase_ATP-bd. DR InterPro; IPR001650; Helicase_C. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00487; DEXDc; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. DR PROSITE; PS51194; HELICASE_CTER; 1. PE 4: Predicted; KW ATP-binding {ECO:0000313|EMBL:CBK81746.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000008798}; KW Helicase {ECO:0000313|EMBL:CBK81746.1}; KW Hydrolase {ECO:0000313|EMBL:CBK81746.1}; KW Nucleotide-binding {ECO:0000313|EMBL:CBK81746.1}; KW Reference proteome {ECO:0000313|Proteomes:UP000008798}. FT DOMAIN 197 456 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT DOMAIN 608 796 Helicase C-terminal. FT {ECO:0000259|PROSITE:PS51194}. SQ SEQUENCE 803 AA; 91937 MW; 2A59CA89E2CB54F5 CRC64; MSQKTVTVSV RRLVEFILRS GDIDTVSGAF GEMDAMQQGG LMHRKLQKEA GPSYRAEVSL KHTTEMDETL AITVEGRADG VITETEMAAD ESGELGLKEV VTIDEIKGTY RNLRYITEPV SVHLAQAKCY AFFYAEKEDL EEIQVQMTYV HLKTGKVQRF REKMTRNELE VWYTELIDRF AVWVRHQIAW IKKRNISIGA GSFPFEYRES QKKLVSGVYQ TILRHRRLFV EAPTGTGKTI SAIYPAVQAM GNGLSETIFY LTARTIARTV AEDTFGLLQD KGLAMKVITL TAKEKICVLD KVQCSPEYCS RAKGHYDRIN EAIYDLITHE DRMTRECILA YADKYQVCPF EFQLDAALFA DAVIGDYNYV FDPNVALKRF FSDRSGDYLF LIDEAHNLVD RAREMYSAVM SMTELTHARH AVEDKAVDRR LVTYMDRSIL AMSALRESSE QSCQLMGNIG SLIVYLTKLS EQLEETLKEA VPASLREVLM EFYFDIRRFI CAFERSDDRY LIYALRSEDS FEIKIFCVDP SKDLGERLAK GCGAVFFSAT LLPVQYYKEM LSDTAVSDYD LYVDSPFAEE NRLLVAATDV SSRYTRRGRK EYERMAAYIR DIIRGKHGNY MVFFPSYQLM KDVFEVFTEM ELMKAGHGLQ LVVQESEMSE DARQKFLDAF QADAADAVIG FCVMGGIFSE GIDLKEDRLI GVIIIGTGLP QVGEERELLS RYFNEKSGRG FEYAYLYPGM NKVLQAAGRV IRTEKDRGVI ALLDERFNYS QYRKLFPREW HNCSKTSLNT IVQQVEDFWT DKA // ID D5GME3_TUBMM Unreviewed; 748 AA. AC D5GME3; DT 15-JUN-2010, integrated into UniProtKB/TrEMBL. DT 15-JUN-2010, sequence version 1. DT 11-MAY-2016, entry version 34. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CAZ85686.1}; GN ORFNames=GSTUM_00010670001 {ECO:0000313|EMBL:CAZ85686.1}; OS Tuber melanosporum (strain Mel28) (Perigord black truffle). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Pezizomycetes; OC Pezizales; Tuberaceae; Tuber. OX NCBI_TaxID=656061 {ECO:0000313|EMBL:CAZ85686.1, ECO:0000313|Proteomes:UP000006911}; RN [1] {ECO:0000313|EMBL:CAZ85686.1, ECO:0000313|Proteomes:UP000006911} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Mel28 {ECO:0000313|EMBL:CAZ85686.1, RC ECO:0000313|Proteomes:UP000006911}; RX PubMed=20348908; DOI=10.1038/nature08867; RA Martin F., Kohler A., Murat C., Balestrini R., Coutinho P.M., RA Jaillon O., Montanini B., Morin E., Noel B., Percudani R., Porcel B., RA Rubini A., Amicucci A., Amselem J., Anthouard V., Arcioni S., RA Artiguenave F., Aury J.M., Ballario P., Bolchi A., Brenna A., Brun A., RA Buee M., Cantarel B., Chevalier G., Couloux A., Da Silva C., RA Denoeud F., Duplessis S., Ghignone S., Hilselberger B., Iotti M., RA Marcais B., Mello A., Miranda M., Pacioni G., Quesneville H., RA Riccioni C., Ruotolo R., Splivallo R., Stocchi V., Tisserant E., RA Viscomi A.R., Zambonelli A., Zampieri E., Henrissat B., Lebrun M.H., RA Paolocci F., Bonfante P., Ottonello S., Wincker P.; RT "Perigord black truffle genome uncovers evolutionary origins and RT mechanisms of symbiosis."; RL Nature 464:1033-1038(2010). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FN430354; CAZ85686.1; -; Genomic_DNA. DR RefSeq; XP_002841495.1; XM_002841449.1. DR UniGene; Tme.1043; -. DR EnsemblFungi; CAZ85686; CAZ85686; GSTUM_00010670001. DR GeneID; 9183256; -. DR KEGG; tml:GSTUM_00010670001; -. DR InParanoid; D5GME3; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000006911; Unassembled WGS sequence. DR GO; GO:0005829; C:cytosol; IEA:EnsemblFungi. DR GO; GO:0000112; C:nucleotide-excision repair factor 3 complex; IEA:EnsemblFungi. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0000717; P:nucleotide-excision repair, DNA duplex unwinding; IEA:EnsemblFungi. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 2. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000006911}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000006911}. FT DOMAIN 49 296 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 268 295 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 748 AA; 85004 MW; 795C709CD9D0D477 CRC64; MFAKSFKRVS RPKPHVEAQS FKRKKKKRPT SPLHRAAPPQ LAMRFKIDEL EVLFPYPRIY PGEWRYMTDL KRTLDAGGHC VLEMPSGTGK TVSLLSLIVA YQQSFPEPRK LIYCSRTMSE IEKALAELKA LMAYRSKELG YVEEFRGSLT AGFVKEKKAR GEEVEVCVFH DNLDTLEPHN LITPGVYTLD GMLKYGEKHT QCPYFTARRM MPFCNVIIYS YHYLLDPKIA ERVSKELSKD CIVVFDEAHN IDNVCIESLS IDLTDDSLRR AARGAQNLEK KINEMKASDA EKLQNEYKKL VEGLRDVDEG TEEDSFMANP VLPKDLLKEA IPGNIRRAEH FLAFLKRFVE YLKTRMKVLH VISETPASFL QHLKDLTFIE KKPLRFCAER LTSLVRTLEL ANIEDYKSLQ EVAMFATLVA TYEKGFLLIL EPFESETATV PNPILHFTCL DASIAIRPVF ERFSSVVITS GTISPLEMYP KMLQFNTVVQ ESYSMTLARR SFLPMIVTRG SDQVAVSTRF EIRNDPSVVR NYGSLLVEFS KITPDGMVVF FPSYLYMESI ISMWQGMGIL DEVWKYKLIL VETPDSQETS LALETYRTAC CNGRGAISTT ISVELCFESP SNTPKNDFLS FDAMRHAAQC LGRVLRGKDD YGIMVLADRR FGKKRSQLPK WINQALLESD VNLSTDMAVA IAKKFLRTMA QPFAPKDQEG ISTWSLADLE EHQGKGSELQ DVGEEEGEED VVMANAVA // ID D6WI90_TRICA Unreviewed; 759 AA. AC D6WI90; DT 10-AUG-2010, integrated into UniProtKB/TrEMBL. DT 10-AUG-2010, sequence version 1. DT 11-MAY-2016, entry version 39. DE SubName: Full=Regulator of telomere elongation helicase 1 homolog-like Protein {ECO:0000313|EMBL:EFA00018.1}; GN ORFNames=TcasGA2_TC002825 {ECO:0000313|EMBL:EFA00018.1}; OS Tribolium castaneum (Red flour beetle). OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; OC Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; OC Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium. OX NCBI_TaxID=7070 {ECO:0000313|EMBL:EFA00018.1, ECO:0000313|Proteomes:UP000007266}; RN [1] {ECO:0000313|EMBL:EFA00018.1, ECO:0000313|Proteomes:UP000007266} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Georgia GA2 {ECO:0000313|EMBL:EFA00018.1, RC ECO:0000313|Proteomes:UP000007266}; RX PubMed=18362917; DOI=10.1038/nature06784; RG Tribolium Genome Sequencing Consortium; RA Richards S., Gibbs R.A., Weinstock G.M., Brown S.J., Denell R., RA Beeman R.W., Gibbs R., Beeman R.W., Brown S.J., Bucher G., RA Friedrich M., Grimmelikhuijzen C.J., Klingler M., Lorenzen M., RA Richards S., Roth S., Schroder R., Tautz D., Zdobnov E.M., Muzny D., RA Gibbs R.A., Weinstock G.M., Attaway T., Bell S., Buhay C.J., RA Chandrabose M.N., Chavez D., Clerk-Blankenburg K.P., Cree A., Dao M., RA Davis C., Chacko J., Dinh H., Dugan-Rocha S., Fowler G., Garner T.T., RA Garnes J., Gnirke A., Hawes A., Hernandez J., Hines S., Holder M., RA Hume J., Jhangiani S.N., Joshi V., Khan Z.M., Jackson L., Kovar C., RA Kowis A., Lee S., Lewis L.R., Margolis J., Morgan M., Nazareth L.V., RA Nguyen N., Okwuonu G., Parker D., Richards S., Ruiz S.J., RA Santibanez J., Savard J., Scherer S.E., Schneider B., Sodergren E., RA Tautz D., Vattahil S., Villasana D., White C.S., Wright R., Park Y., RA Beeman R.W., Lord J., Oppert B., Lorenzen M., Brown S., Wang L., RA Savard J., Tautz D., Richards S., Weinstock G., Gibbs R.A., Liu Y., RA Worley K., Weinstock G., Elsik C.G., Reese J.T., Elhaik E., Landan G., RA Graur D., Arensburger P., Atkinson P., Beeman R.W., Beidler J., RA Brown S.J., Demuth J.P., Drury D.W., Du Y.Z., Fujiwara H., RA Lorenzen M., Maselli V., Osanai M., Park Y., Robertson H.M., Tu Z., RA Wang J.J., Wang S., Richards S., Song H., Zhang L., Sodergren E., RA Werner D., Stanke M., Morgenstern B., Solovyev V., Kosarev P., RA Brown G., Chen H.C., Ermolaeva O., Hlavina W., Kapustin Y., RA Kiryutin B., Kitts P., Maglott D., Pruitt K., Sapojnikov V., RA Souvorov A., Mackey A.J., Waterhouse R.M., Wyder S., Zdobnov E.M., RA Zdobnov E.M., Wyder S., Kriventseva E.V., Kadowaki T., Bork P., RA Aranda M., Bao R., Beermann A., Berns N., Bolognesi R., Bonneton F., RA Bopp D., Brown S.J., Bucher G., Butts T., Chaumot A., Denell R.E., RA Ferrier D.E., Friedrich M., Gordon C.M., Jindra M., Klingler M., RA Lan Q., Lattorff H.M., Laudet V., von Levetsow C., Liu Z., Lutz R., RA Lynch J.A., da Fonseca R.N., Posnien N., Reuter R., Roth S., RA Savard J., Schinko J.B., Schmitt C., Schoppmeier M., Schroder R., RA Shippy T.D., Simonnet F., Marques-Souza H., Tautz D., Tomoyasu Y., RA Trauner J., Van der Zee M., Vervoort M., Wittkopp N., Wimmer E.A., RA Yang X., Jones A.K., Sattelle D.B., Ebert P.R., Nelson D., Scott J.G., RA Beeman R.W., Muthukrishnan S., Kramer K.J., Arakane Y., Beeman R.W., RA Zhu Q., Hogenkamp D., Dixit R., Oppert B., Jiang H., Zou Z., RA Marshall J., Elpidina E., Vinokurov K., Oppert C., Zou Z., Evans J., RA Lu Z., Zhao P., Sumathipala N., Altincicek B., Vilcinskas A., RA Williams M., Hultmark D., Hetru C., Jiang H., Grimmelikhuijzen C.J., RA Hauser F., Cazzamali G., Williamson M., Park Y., Li B., Tanaka Y., RA Predel R., Neupert S., Schachtner J., Verleyen P., Raible F., Bork P., RA Friedrich M., Walden K.K., Robertson H.M., Angeli S., Foret S., RA Bucher G., Schuetz S., Maleszka R., Wimmer E.A., Beeman R.W., RA Lorenzen M., Tomoyasu Y., Miller S.C., Grossmann D., Bucher G.; RT "The genome of the model beetle and pest Tribolium castaneum."; RL Nature 452:949-955(2008). RN [2] {ECO:0000313|EMBL:EFA00018.1, ECO:0000313|Proteomes:UP000007266} RP GENOME REANNOTATION. RC STRAIN=Georgia GA2 {ECO:0000313|EMBL:EFA00018.1, RC ECO:0000313|Proteomes:UP000007266}; RX PubMed=19820115; DOI=10.1093/nar/gkp807; RA Kim H.S., Murphy T., Xia J., Caragea D., Park Y., Beeman R.W., RA Lorenzen M.D., Butcher S., Manak J.R., Brown S.J.; RT "BeetleBase in 2010: revisions to provide comprehensive genomic RT information for Tribolium castaneum."; RL Nucleic Acids Res. 38:D437-D442(2010). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; KQ971321; EFA00018.1; -; Genomic_DNA. DR RefSeq; XP_970844.1; XM_965751.3. DR STRING; 7070.TC002825-PA; -. DR EnsemblMetazoa; TC002825-RA; TC002825-PA; TC002825. DR GeneID; 659447; -. DR KEGG; tca:659447; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; D6WI90; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG70W3CM; -. DR PhylomeDB; D6WI90; -. DR Proteomes; UP000007266; Linkage group 3. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EFA00018.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000007266}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EFA00018.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EFA00018.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EFA00018.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000007266}. FT DOMAIN 7 290 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 759 AA; 86914 MW; 3977CA8A4A4FA70A CRC64; MKLNVDGLIV YFPYDYIYPE QYAYMCELKR ALDAKGHCLL EMPSGTGKTT TILSLVVAYM LEHPHDVRKL IYCSRTVPEI EKVMEELKKL LEYYEKLDGE YPHLLGLVLS SRKNLCIHPE VSTEREGKIV DGKCHALTAS YIRERHNYDD TTPICQYYEG FALDGKESTM PFGVYSIDDL KQYGRDRNWC PYFLSRFVIS YANIVVYSYH YLLDPKIAEV VSKELTRESV VIFDEAHNID NVCIDSMSVK INKRIIDRAS ANIQLLERTV AEMREDDHKK LQEEYQRLVE GLRDASVARD TDVILANPVL PDAILQEAVP GNIRNAEHFV SFLKRFLEYL KTRLRVQHVV QESPAGFLKD VQSKVCIERK PLRFCAERLA SLLRTLEISD LTDFSPVILV THLATLVATY TKGFTIIVEP FDDKTPTVSN PILHFSCLDS SIAIKPVFDR FQTVVITSGT LSPLDMYPKI LNFHPVIMSS FTMTLARPCL LPMIVSKGND QVAISSKFET REDNAVIRNY GQLLVEIAAN VPDGIVCFFT SYLYLESVVA SWYDQGVIDS LQRYKLLFIE TQDSAETSFA LMYYIKACES GRGAVLLSVA RGKVSEGVDF DHHLGRAVLM FGIPYVYTQS RILKARLDYL RDQFQIREND FLTFDAMRHA AQCVGRAIRG KTDYGIMIFA DKRFSRSDKR SKLPKWIQEH LKDSLTNLST EEAVQIAKRW LRQMAQPFTR EDQLGVSLLT LEQLQNLEAS KIQEQAQQN // ID D7KCC5_ARALL Unreviewed; 758 AA. AC D7KCC5; DT 10-AUG-2010, integrated into UniProtKB/TrEMBL. DT 10-AUG-2010, sequence version 1. DT 11-MAY-2016, entry version 38. DE SubName: Full=Putative uncharacterized protein {ECO:0000313|EMBL:EFH65703.1}; GN ORFNames=ARALYDRAFT_470299 {ECO:0000313|EMBL:EFH65703.1}; OS Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; OC Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; OC Arabidopsis. OX NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694}; RN [1] {ECO:0000313|Proteomes:UP000008694} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694}; RX PubMed=21478890; DOI=10.1038/ng.807; RA Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M., RA Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G., RA Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., RA Schneeberger K., Spannagl M., Wang X., Yang L., Nasrallah M.E., RA Bergelson J., Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., RA Van de Peer Y., Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.; RT "The Arabidopsis lyrata genome sequence and the basis of rapid genome RT size change."; RL Nat. Genet. 43:476-481(2011). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GL348713; EFH65703.1; -; Genomic_DNA. DR RefSeq; XP_002889444.1; XM_002889398.1. DR EnsemblPlants; fgenesh2_kg.1__253__AT1G03190.1; fgenesh2_kg.1__253__AT1G03190.1; fgenesh2_kg.1__253__AT1G03190.1. DR GeneID; 9325508; -. DR Gramene; fgenesh2_kg.1__253__AT1G03190.1; fgenesh2_kg.1__253__AT1G03190.1; fgenesh2_kg.1__253__AT1G03190.1. DR KEGG; aly:ARALYDRAFT_470299; -. DR KO; K10844; -. DR Proteomes; UP000008694; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0000724; P:double-strand break repair via homologous recombination; IEA:EnsemblPlants. DR GO; GO:0010286; P:heat acclimation; IEA:EnsemblPlants. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR GO; GO:0045893; P:positive regulation of transcription, DNA-templated; IEA:EnsemblPlants. DR GO; GO:0043687; P:post-translational protein modification; IEA:EnsemblPlants. DR GO; GO:0006457; P:protein folding; IEA:EnsemblPlants. DR GO; GO:0009644; P:response to high light intensity; IEA:EnsemblPlants. DR GO; GO:0042542; P:response to hydrogen peroxide; IEA:EnsemblPlants. DR GO; GO:0010212; P:response to ionizing radiation; IEA:EnsemblPlants. DR GO; GO:0009411; P:response to UV; IEA:EnsemblPlants. DR GO; GO:0000394; P:RNA splicing, via endonucleolytic cleavage and ligation; IEA:EnsemblPlants. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:EnsemblPlants. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000008694}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000008694}. FT DOMAIN 7 285 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 758 AA; 86165 MW; EEA15434B98B2A10 CRC64; MIFKIEDVTV YFPYDNIYPE QYEYMVELKR ALDAKGHCLL EMPTGTGKTI ALLSLITSYR LSRPDSPIKL VYCTRTVHEM EKTLGELKLL HDYQVRHLGA QAMILAIGLS SRKNLCVNTK VLAAENRDSV DAACRKRTAS WVRALSTENP NVELCDYFEN YEKAADNALL PPGVYTLEDL RAFGKNRGWC PYFLARHMVQ FANVIVYSYQ YLLDPKVAGI ISKELQKESV VVFDEAHNID NVCIEALSVS VRRVTLEGAN RNLNKIRQEI DRFKATDAGR LRAEYNRLVE GLALRGDLSG SDQWLANPAL PHDILKEAVP GNIRRAEHFV HVLRRLLQYL GVRLDTENVE KESPVSFVSS LNSQAGIEQK TLKFCYDRLQ SLMLTLEITD TDEFLPIQTV CDFATLVGTY ARGFSIIIEP YDERMPHIPD PILQLSCHDA SLAIKPVFDR FQSVVITSGT LSPIDLYPRL LSFTPVVSRS FKMSMTRDCI CPMVLTRGSD QLPVSTKFDM RSDPGVVRNY GKLLVEMVSI VPDGVVCFFV SYSYMDGIIA TWNETGILKE IMQQKLVFIE TQDVVETTLA LDNYRRACDC GRGAVFFSVA RGKVAEGIDF DRHYGRLVVM YGVPFQYTLS KILRARLEYL HDTFQIKEGD FLTFDALRQA AQCVGRVIRS KADYGMMIFA DKRYSRHDKR SKLPGWILSH LRDAHLNLST DMAIHIAREF LRKMAQPYDK AGTMGRKTLL TQEDLEKMAE TGVQDMAY // ID D8LDN2_ECTSI Unreviewed; 824 AA. AC D8LDN2; DT 05-OCT-2010, integrated into UniProtKB/TrEMBL. DT 05-OCT-2010, sequence version 1. DT 11-MAY-2016, entry version 27. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CBN78439.1}; GN ORFNames=Esi_0121_0017 {ECO:0000313|EMBL:CBN78439.1}; OS Ectocarpus siliculosus (Brown alga) (Conferva siliculosa). OC Eukaryota; Stramenopiles; PX clade; Phaeophyceae; Ectocarpales; OC Ectocarpaceae; Ectocarpus. OX NCBI_TaxID=2880 {ECO:0000313|EMBL:CBN78439.1, ECO:0000313|Proteomes:UP000002630}; RN [1] {ECO:0000313|EMBL:CBN78439.1, ECO:0000313|Proteomes:UP000002630} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Ec32 / CCAP1310/4 {ECO:0000313|Proteomes:UP000002630}; RX PubMed=20520714; DOI=10.1038/nature09016; RA Cock J.M., Sterck L., Rouze P., Scornet D., Allen A.E., Amoutzias G., RA Anthouard V., Artiguenave F., Aury J.M., Badger J.H., Beszteri B., RA Billiau K., Bonnet E., Bothwell J.H., Bowler C., Boyen C., RA Brownlee C., Carrano C.J., Charrier B., Cho G.Y., Coelho S.M., RA Collen J., Corre E., Da Silva C., Delage L., Delaroque N., RA Dittami S.M., Doulbeau S., Elias M., Farnham G., Gachon C.M., RA Gschloessl B., Heesch S., Jabbari K., Jubin C., Kawai H., Kimura K., RA Kloareg B., Kupper F.C., Lang D., Le Bail A., Leblanc C., Lerouge P., RA Lohr M., Lopez P.J., Martens C., Maumus F., Michel G., RA Miranda-Saavedra D., Morales J., Moreau H., Motomura T., Nagasato C., RA Napoli C.A., Nelson D.R., Nyvall-Collen P., Peters A.F., Pommier C., RA Potin P., Poulain J., Quesneville H., Read B., Rensing S.A., RA Ritter A., Rousvoal S., Samanta M., Samson G., Schroeder D.C., RA Segurens B., Strittmatter M., Tonon T., Tregear J.W., Valentin K., RA von Dassow P., Yamagishi T., Van de Peer Y., Wincker P.; RT "The Ectocarpus genome and the independent evolution of RT multicellularity in brown algae."; RL Nature 465:617-621(2010). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FN647885; CBN78439.1; -; Genomic_DNA. DR InParanoid; D8LDN2; -. DR Proteomes; UP000002630; Chromosome LG33. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 2. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000002630}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000002630}. FT DOMAIN 7 290 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 824 AA; 90100 MW; 94A5369359EBBC54 CRC64; MRLDLDGLDV FFPYDFMYPE QYDYMLELKR SLDAKGHCLL EMPTGTGKTV CLISLITSYQ FAHPEVGKLI YCTRTVPEMM KCIEELKRVI GYRKDQLGPE GEKVLALCLS SRRNLCIHER VIEESDREAV DGACRDMTAS WVRKKAEAGG GGELCEFFEG YSANGSDAAM PNGIYSLDDL KEFGKEKGWC PYFLARHIIN HANVLVYNYQ YMLDPKVAGM VSRELEAESV VVFDEAHNID NVCTEALSVD LDKRSLDAAS RCLGKISSKV AEMKRTDQAR LNAEYQRLVS GLADSGLGRA SGGVAGSAAG AGGAAAAGGG GGGAAGAGAS AGSGGGATEV AAAADAIPAN PALPADILQE AVPGNIRRAE HFVSFMRKVV EHFKTRVRVQ SVESETPLAF VHRMQQVTAL ERKPLKFAYS RLNSLLRTLE VTGLDDFRPL VDVADFATLV GTYTEGFAVV IEPTGSVVPG VYEPVMRLAC LDASLAIRPV FERFASVVIT SGTLSPLDLY PKLLGFSPVV RTALSMSTVR KCICPLVVTR GSDQLPMSTK FDQRDDPSVV RNYGALMIEL AAIVPDGVVC FFTSYSYMEM IVSKWDELGV LKRVLEKKLI FIETKDVVET TLALDNFKRA CDCGRGAIFL SVARGKVAEG IDFDRHYGRA VVMFGVPFQY TLSHVLRARL EYLRSTFQIR EGDFLTFDAI RQCAQCIGRV IRSKTDYGLV ILADSRYNRH DKRSKLPGWV LQFLDETHLN MSADNAAAMA RMFLKDMAQP LDPLRLKGTM LDTKKVAARN REKTGKEQRN ASELNPSAAA AAGGGGAVDG MEIE // ID D8Q918_SCHCM Unreviewed; 792 AA. AC D8Q918; DT 05-OCT-2010, integrated into UniProtKB/TrEMBL. DT 05-OCT-2010, sequence version 1. DT 11-MAY-2016, entry version 32. DE SubName: Full=Putative uncharacterized protein {ECO:0000313|EMBL:EFI95571.1}; GN ORFNames=SCHCODRAFT_77555 {ECO:0000313|EMBL:EFI95571.1}; OS Schizophyllum commune (strain H4-8 / FGSC 9210) (Split gill fungus). OC Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; OC Agaricomycetes; Agaricomycetidae; Agaricales; Schizophyllaceae; OC Schizophyllum. OX NCBI_TaxID=578458 {ECO:0000313|Proteomes:UP000007431}; RN [1] {ECO:0000313|EMBL:EFI95571.1, ECO:0000313|Proteomes:UP000007431} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=H4-8 / FGSC 9210 {ECO:0000313|Proteomes:UP000007431}; RX PubMed=20622885; DOI=10.1038/nbt.1643; RA Ohm R.A., de Jong J.F., Lugones L.G., Aerts A., Kothe E., RA Stajich J.E., de Vries R.P., Record E., Levasseur A., Baker S.E., RA Bartholomew K.A., Coutinho P.M., Erdmann S., Fowler T.J., RA Gathman A.C., Lombard V., Henrissat B., Knabe N., Kuees U., RA Lilly W.W., Lindquist E., Lucas S., Magnuson J.K., Piumi F., RA Raudaskoski M., Salamov A., Schmutz J., Schwarze F.W.M.R., RA vanKuyk P.A., Horton J.S., Grigoriev I.V., Woesten H.A.B.; RT "Genome sequence of the model mushroom Schizophyllum commune."; RL Nat. Biotechnol. 28:957-963(2010). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GL377308; EFI95571.1; -; Genomic_DNA. DR RefSeq; XP_003030474.1; XM_003030428.1. DR STRING; 578458.XP_003030474.1; -. DR EnsemblFungi; EFI95571; EFI95571; SCHCODRAFT_77555. DR GeneID; 9588040; -. DR KEGG; scm:SCHCODRAFT_77555; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; D8Q918; -. DR KO; K10844; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000007431; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000007431}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000007431}. FT DOMAIN 7 291 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 792 AA; 90139 MW; 0FC580B9F3D19CE2 CRC64; MKFNIDDLPI VFPYDRIYPE QYAYMCDLKR TLDATGHCVL EMPSGTGKTV SLLSLIVSYQ QFYPTKRKLI YCSRTVPEIE KALAELKRLM AYRIQCAETP EQRAKEEAFT GLGLTSRKNL CIHPEVSKEK KGVVVDARCR DLTNAVVCEK GRADPGSVEL CEWHENLGQR EPGQLIPPGI WTLADVLQYG RDNTICPYFL VRRMMPFVDV VIYSFHYLLD PKVADQVSKE LSKDAIVVFD EAHNIDNVCI ESLSIDLTRP MLDSAARSVG KLGEKIEEIK TTDAAKLQDE YARLVEGLQE ASDRPDDADG FMSNPLLPDD LLNEAVPGNI RKAEHFVAFL KRFVEYLKTR MRVLHVVAET PLSFLQHLKD ITYIERRPLR FCAERLQSLI RTLELSRLDE YSALQKVASF ATLVSTYERG FILILEPFET DNATVPNPIF HFACLDPSLA IQPVFERFSS VVITSGTISP LDMYPKMLQF TPVVQESYPM TLTRNSFLPL VITRGSDQVA ISSRFEVRND PAVVRNFGSI LIEYSKIVPD GIVAFFPSYL YMESIVAAWN DMGILNEVWN HKLIFVETPD SNETSIALEN YRRACDNGRG AVLLSVARGK VSEGIDFDHN YGRAVIMFGV PYQYTESRIL KARLEYLRDA YRIRESEFLS FDAIRNAAQC VGRVLRGKTD WGLMVFADKR FGRSDKRSKL PRWINQYITE TASNLSTDMA ITLSKIFMRT ISQNPNENQT GISLWTLEDI EKAQAKQKME SMMMEVEGQE DDDYGDGGIT DRMMMEVDMT LS // ID D8RDK7_SELML Unreviewed; 768 AA. AC D8RDK7; DT 05-OCT-2010, integrated into UniProtKB/TrEMBL. DT 05-OCT-2010, sequence version 1. DT 11-MAY-2016, entry version 35. DE SubName: Full=Putative uncharacterized protein {ECO:0000313|EMBL:EFJ30044.1}; GN ORFNames=SELMODRAFT_91042 {ECO:0000313|EMBL:EFJ30044.1}; OS Selaginella moellendorffii (Spikemoss). OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Lycopodiidae; Selaginellales; Selaginellaceae; Selaginella. OX NCBI_TaxID=88036 {ECO:0000313|Proteomes:UP000001514}; RN [1] {ECO:0000313|EMBL:EFJ30044.1, ECO:0000313|Proteomes:UP000001514} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RX PubMed=21551031; DOI=10.1126/science.1203810; RA Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M., RA dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., RA Ashton N.W., Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., RA Bonawitz N.D., Chapple C., Cheng C., Correa L.G., Dacre M., RA DeBarry J., Dreyer I., Elias M., Engstrom E.M., Estelle M., Feng L., RA Finet C., Floyd S.K., Frommer W.B., Fujita T., Gramzow L., RA Gutensohn M., Harholt J., Hattori M., Heyl A., Hirai T., Hiwatashi Y., RA Ishikawa M., Iwata M., Karol K.G., Koehler B., Kolukisaoglu U., RA Kubo M., Kurata T., Lalonde S., Li K., Li Y., Litt A., Lyons E., RA Manning G., Maruyama T., Michael T.P., Mikami K., Miyazaki S., RA Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R., Obara M., RA Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B., RA Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y., RA Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N., RA Shinohara N., Shippen D.E., Soerensen I., Sotooka R., Sugimoto N., RA Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., RA Wakazuki S., Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., RA Zimmer A.D., Zhu Q., Mitros T., Hellsten U., Loque D., Otillar R., RA Salamov A., Schmutz J., Shapiro H., Lindquist E., Lucas S., RA Rokhsar D., Grigoriev I.V.; RT "The Selaginella genome identifies genetic changes associated with the RT evolution of vascular plants."; RL Science 332:960-963(2011). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GL377576; EFJ30044.1; -; Genomic_DNA. DR RefSeq; XP_002968928.1; XM_002968882.1. DR STRING; 88036.EFJ30044; -. DR EnsemblPlants; EFJ30044; EFJ30044; SELMODRAFT_91042. DR GeneID; 9651504; -. DR Gramene; EFJ30044; EFJ30044; SELMODRAFT_91042. DR KEGG; smo:SELMODRAFT_91042; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; D8RDK7; -. DR KO; K10844; -. DR OMA; KICPYFL; -. DR Proteomes; UP000001514; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 5. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000001514}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000001514}. FT DOMAIN 7 285 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 768 AA; 87755 MW; F43FEDECF557A71A CRC64; MKFVIEGLTV YFPYEFIYRE QYAYMVELKH ALDARGHCLL EMPTGTGKTI TLLSLITSYQ LANPSLAKLI YCTRTVHEME KVLDELRRLH LYQEKEIGSS RAKILALGLS SRKNLCIHPV VSGETSRESV DAGCRKLTAS WVRAAAETNL DIETCSFYQG YEKQGSEQPL PPGVYTLHDL RVYGRQRGWC PYFLARQMIQ FANVVVYNYQ YLLDPKVSGI ISKEMQKECI VVFDEAHNID NVCIEALSVN LRQNNLDGAS RNIHKLNQII SRFKETDANR LRQEYNRLVE GLAQQGNLHG SDNWLANPVL PEDILREAVP GNIRRAEHFV AFLQRAVQYL RERLDTDTVV KEGPVSFTTT MSTAAGLDQK ALKFCYDRLH SLLLTLEVTE IDEFLHVQTV CNFLTLVGTY TRGFSIIIEP YDERMPHIPD PVLQLSCLDA SLAIKPVFDR FQSVVITSGT LSPIDLYPRL LNFNPVIIHS FTMTLTRDCL CPMILARGSD QLPVSSKFDM RSDPGVVRNY GRLLLEMVAT VPDGVVCFFV SYSYMDGIIN SWNEMGILQE VMQHKLVFIE TQDYVETTLA LENFRQACDC GRGAVFFSVA RGKVAEGIDF DRHYGRLVIM FGVPFQYTLS KILNARLEYL RDTFQIKEGD FLTFDAVASS LRSVLRLFVY LYQRQAAQCV GRVIRSKADY GMMIFADKRY NLPNKRNKLP QWIQSQLREE HLNLSTDMAV HIAREFLRRM AQPSDPQVSK STLLSQEDLE KMAAMPNF // ID D8T2U1_SELML Unreviewed; 752 AA. AC D8T2U1; DT 05-OCT-2010, integrated into UniProtKB/TrEMBL. DT 05-OCT-2010, sequence version 1. DT 11-MAY-2016, entry version 32. DE SubName: Full=Putative uncharacterized protein {ECO:0000313|EMBL:EFJ08988.1}; GN ORFNames=SELMODRAFT_269587 {ECO:0000313|EMBL:EFJ08988.1}; OS Selaginella moellendorffii (Spikemoss). OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Lycopodiidae; Selaginellales; Selaginellaceae; Selaginella. OX NCBI_TaxID=88036 {ECO:0000313|Proteomes:UP000001514}; RN [1] {ECO:0000313|EMBL:EFJ08988.1, ECO:0000313|Proteomes:UP000001514} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RX PubMed=21551031; DOI=10.1126/science.1203810; RA Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M., RA dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., RA Ashton N.W., Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., RA Bonawitz N.D., Chapple C., Cheng C., Correa L.G., Dacre M., RA DeBarry J., Dreyer I., Elias M., Engstrom E.M., Estelle M., Feng L., RA Finet C., Floyd S.K., Frommer W.B., Fujita T., Gramzow L., RA Gutensohn M., Harholt J., Hattori M., Heyl A., Hirai T., Hiwatashi Y., RA Ishikawa M., Iwata M., Karol K.G., Koehler B., Kolukisaoglu U., RA Kubo M., Kurata T., Lalonde S., Li K., Li Y., Litt A., Lyons E., RA Manning G., Maruyama T., Michael T.P., Mikami K., Miyazaki S., RA Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R., Obara M., RA Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B., RA Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y., RA Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N., RA Shinohara N., Shippen D.E., Soerensen I., Sotooka R., Sugimoto N., RA Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., RA Wakazuki S., Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., RA Zimmer A.D., Zhu Q., Mitros T., Hellsten U., Loque D., Otillar R., RA Salamov A., Schmutz J., Shapiro H., Lindquist E., Lucas S., RA Rokhsar D., Grigoriev I.V.; RT "The Selaginella genome identifies genetic changes associated with the RT evolution of vascular plants."; RL Science 332:960-963(2011). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GL377667; EFJ08988.1; -; Genomic_DNA. DR RefSeq; XP_002989975.1; XM_002989929.1. DR STRING; 88036.EFJ08988; -. DR EnsemblPlants; EFJ08988; EFJ08988; SELMODRAFT_269587. DR GeneID; 9629975; -. DR Gramene; EFJ08988; EFJ08988; SELMODRAFT_269587. DR KEGG; smo:SELMODRAFT_269587; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; D8T2U1; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR Proteomes; UP000001514; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000001514}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000001514}. FT DOMAIN 7 285 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 752 AA; 85872 MW; 0F91D0238EA00975 CRC64; MKFVIEGLTV YFPYEFIYRE QYAYMVELKH ALDARGHCLL EMPTGTGKTI TLLSLITSYQ LANPSLAKLI YCTRTVHEME KVLDELRRLH LYQEKEIGSS RAKILALGLS SRKNLCIHPV VSSETSRESV DAGCRKLTAS WVRAAAETNP DIETCSFYQG YEKQGSEQPL PPGVYTLHDL RVYGRQRGWC PYFLARQMIQ FANVVVYNYQ YLLDPKVSGI ISKEMQKECI VVFDEAHNID NVCIEALSVN LRQNNLDGAS RNIHKLNQII SRFKETDANR LRQEYNRLVE GLAQQGNLHG SDNWLANPVL PEDILREAVP GNIRRAEHFV AFLQRAVQYL RERLDTDTVV KEGPVSFTTT MSTAAGLDQK ALKFCYDRLH SLLLTLEVTE IDEFLHVQTV CNFLTLVGTY TRGFSIIIEP YDERMPHIPD PVLQLSCLDA SLAIKPVFDR FQSVVITSGT LSPIDLYPRL LNFNPVIIHS FTMTLTRDCL CPMILARGSD QLPVSSKFDM RSDPGVVRNY GRLLLEMVAT VPDGVVCFFV SYSYMDGIIN SWNEMGILQE VMQHKLVFIE TQDYVETTLA LENFRQACDC GRGAVFFSVA RGKVAEGIDF DRHYGRLVIM FGVPFQYTLS KILNARLEYL RDTFQIKEGD FLTFDAVRQA AQCVGRVIRS KADYGMMIFA DKRYNLPNKR NKLPQWIQSQ LREEHLNLST DMAVHIAREF LRRMAQPSDP QVSKSTLLSQ EDLEKMAAMP NF // ID D8TTF2_VOLCA Unreviewed; 780 AA. AC D8TTF2; DT 05-OCT-2010, integrated into UniProtKB/TrEMBL. DT 05-OCT-2010, sequence version 1. DT 11-MAY-2016, entry version 29. DE SubName: Full=Putative uncharacterized protein {ECO:0000313|EMBL:EFJ49189.1}; GN ORFNames=VOLCADRAFT_59582 {ECO:0000313|EMBL:EFJ49189.1}; OS Volvox carteri f. nagariensis. OC Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; OC Chlamydomonadales; Volvocaceae; Volvox. OX NCBI_TaxID=3068 {ECO:0000313|Proteomes:UP000001058}; RN [1] {ECO:0000313|EMBL:EFJ49189.1, ECO:0000313|Proteomes:UP000001058} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=f. Nagariensis / Eve {ECO:0000313|Proteomes:UP000001058}; RX PubMed=20616280; DOI=10.1126/science.1188800; RA Prochnik S.E., Umen J., Nedelcu A.M., Hallmann A., Miller S.M., RA Nishii I., Ferris P., Kuo A., Mitros T., Fritz-Laylin L.K., RA Hellsten U., Chapman J., Simakov O., Rensing S.A., Terry A., RA Pangilinan J., Kapitonov V., Jurka J., Salamov A., Shapiro H., RA Schmutz J., Grimwood J., Lindquist E., Lucas S., Grigoriev I.V., RA Schmitt R., Kirk D., Rokhsar D.S.; RT "Genomic analysis of organismal complexity in the multicellular green RT alga Volvox carteri."; RL Science 329:223-226(2010). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GL378336; EFJ49189.1; -; Genomic_DNA. DR RefSeq; XP_002949637.1; XM_002949591.1. DR GeneID; 9618915; -. DR KEGG; vcn:VOLCADRAFT_59582; -. DR InParanoid; D8TTF2; -. DR KO; K10844; -. DR Proteomes; UP000001058; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR006935; Helicase/UvrB_N. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR Pfam; PF04851; ResIII; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000001058}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000001058}. FT DOMAIN 7 305 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 780 AA; 87544 MW; 5666B471324ABEEA CRC64; MKFNLEGLTV YFPYEYIYPE QYRYMLELKR ALDARGHCLL EMPTGTGKTI TLLSLITSYQ LAHKEVGKLI YCTRTVPEME KVLAELAELI DYRAKYLGRG PGSNEILALG LSSRKNLCIH PRVAEEGSRE SVDAGCRRLT ASWVRERAAE RGARGGEGGA EEGGSGGSVA DIELCDFFEG HERAGVEALL PPGVYTLSDL RDFGRKRGWC PYFLARHMMA FANVVVYNYQ YMIDPKVSQM VSRELEKECV VVFDEAHNID NVCIEALSVN LRKQTLEAAG RNLGKLSNSI RRAREADAAR LQGEYNRLVA GLVAQGALRG GEDWLANPAL PEDVVQETVP GNIRRAEHFM GFLNRFLAFL REKMASPVVT SQTPQVFLQE LQERVQVDAK TLKFCYDRLS SLLKTLEITN TDEFTPIQLV ADFATLVGTY AKGFAIIMEP YDERLPQVPD PVLQLSCLDA SLAMKPVFSK FQSVVITSGT LSPIDLYPRI LNFNPVAIQS FQMTLTRDCL CPVVVTRGAD QMPMSTKFEM RGDPGVMRNY GRLLVELSAV VPDGIVAFFV SYRYMDQIIS KWHDMGILQE IMQHKLIFIE TQDVVETTLA LDNFRRACDS GRGAVFLSVA RGKVAEGIDF DRHYGRAVVM FGVPYQYTLS RILRARLEYL RETFQIKEND YLAFDAVRQA AQCVGRVIRS KADYGMMIFA DKRYQRHDKR DKLPQWITRH LKEAHMNLST DMMVHVAREF LRAMAQPYDR GAVGKSLLSE AALAALDATG GLDGAIASGA // ID D9SRR0_CLOC7 Unreviewed; 778 AA. AC D9SRR0; DT 05-OCT-2010, integrated into UniProtKB/TrEMBL. DT 05-OCT-2010, sequence version 1. DT 11-MAY-2016, entry version 29. DE SubName: Full=Helicase c2 {ECO:0000313|EMBL:ADL50427.1}; GN OrderedLocusNames=Clocel_0656 {ECO:0000313|EMBL:ADL50427.1}; OS Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / OS 743B). OC Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; OC Clostridium. OX NCBI_TaxID=573061 {ECO:0000313|EMBL:ADL50427.1, ECO:0000313|Proteomes:UP000002730}; RN [1] {ECO:0000313|EMBL:ADL50427.1, ECO:0000313|Proteomes:UP000002730} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 35296 / DSM 3052 / OCM 3 / 743B RC {ECO:0000313|Proteomes:UP000002730}; RG US DOE Joint Genome Institute; RA Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., RA Pitluck S., Chertkov O., Detter J.C., Han C., Tapia R., Land M., RA Hauser L., Chang Y.-J., Jeffries C., Kyrpides N., Ivanova N., RA Mikhailova N., Hemme C.L., Woyke T.; RT "Complete sequence of Clostridium cellulovorans 743B."; RL Submitted (AUG-2010) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002160; ADL50427.1; -; Genomic_DNA. DR RefSeq; WP_010074793.1; NC_014393.1. DR STRING; 573061.Clocel_0656; -. DR EnsemblBacteria; ADL50427; ADL50427; Clocel_0656. DR KEGG; ccb:Clocel_0656; -. DR PATRIC; 41735654; VBICloCel81632203721_1632. DR eggNOG; ENOG4107QX6; Bacteria. DR eggNOG; COG1199; LUCA. DR HOGENOM; HOG000183657; -. DR OMA; DYNYYFD; -. DR BioCyc; CCEL573061:GIXD-693-MONOMER; -. DR Proteomes; UP000002730; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR014001; Helicase_ATP-bd. DR InterPro; IPR001650; Helicase_C. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF00270; DEAD; 1. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00487; DEXDc; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 5. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. DR PROSITE; PS51194; HELICASE_CTER; 1. PE 4: Predicted; KW ATP-binding {ECO:0000313|EMBL:ADL50427.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000002730}; KW Helicase {ECO:0000313|EMBL:ADL50427.1}; KW Hydrolase {ECO:0000313|EMBL:ADL50427.1}; KW Nucleotide-binding {ECO:0000313|EMBL:ADL50427.1}; KW Reference proteome {ECO:0000313|Proteomes:UP000002730}. FT DOMAIN 180 431 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT DOMAIN 583 768 Helicase C-terminal. FT {ECO:0000259|PROSITE:PS51194}. SQ SEQUENCE 778 AA; 90954 MW; FB609856B4E686CE CRC64; MREIKISIRN LVEFIMRHGS IDNRYVGSVR AVEGTRAHQK IQRGYKDNYK AEFPLKYEIV EEDIKIIVEG RADGILSEDD DFIIDEIKTT VRDLASIDED FNPLHWAQAK CYGYIYCLQN ELSEIYIQIT YYNIETDETK FLRNKYTFDE LKNFFFDLID KYKEWAEIQK QWENLRDETI KWLTFPFNEY RRGQRDFAVR VYKSITDGKK CFAQAPTGIG KTVSTLFPAI KALGEGHSSK LFYLTAKTIT REVAENTIEA MRNKGLKLKA VTITAKDKVC FMEESNCNPE YCPYANGYYD RINEALKLIL KEKGDYTREI IEKFAKDYQL CPFELALDLT LWSDAIVCDY NYVFDPKVYL RRFFENKTTD FTFLIDEAHN LVDRGREMFS ATLNKSDVMN LKKELKEKDK RLYKALNNIN SYFVEKKKAC EPEGIIIEKE EPLELYTFLR VFLERADEYL SENQDDSEEL LKFYFDAYSF MSIGDLYNEK YVTFTEKNYD DTRIKLYCVD PSELLQGAMK RGKASVIFSA TLLPLPYFQD ILGGNSEDYL VNLTSPFNID NRLLLIADNV STTYTKREES LDDIVDYIIL TAKSKIGNYM VFFPSYKYME MVYESFLERE TGLTSKIQGS SMTEEEKEEF LGAFKNDPEE SYIGFCVLGG HFSEGIDLTY DRLIGVIIVG VGMPQIGIDR DIIKDYFNEK EGTGFDYAYT YPGMIKVLQA VGRCIRTEED KGVIVLIDTR YGQRRYTQLF PAEWRNNNKV RSTEEAATLM KNFWDRIE // ID E0W239_PEDHC Unreviewed; 747 AA. AC E0W239; DT 02-NOV-2010, integrated into UniProtKB/TrEMBL. DT 02-NOV-2010, sequence version 1. DT 11-MAY-2016, entry version 36. DE SubName: Full=TFIIH basal transcription factor complex helicase subunit, putative {ECO:0000313|EMBL:EEB19695.1}; GN ORFNames=Phum_PHUM583990 {ECO:0000313|EMBL:EEB19695.1}; OS Pediculus humanus subsp. corporis (Body louse). OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; OC Pterygota; Neoptera; Paraneoptera; Phthiraptera; Anoplura; OC Pediculidae; Pediculus. OX NCBI_TaxID=121224 {ECO:0000313|Proteomes:UP000009046}; RN [1] {ECO:0000313|Proteomes:UP000009046} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=USDA {ECO:0000313|Proteomes:UP000009046}; RX PubMed=20566863; DOI=10.1073/pnas.1003379107; RA Kirkness E.F., Haas B.J., Sun W., Braig H.R., Perotti M.A., RA Clark J.M., Lee S.H., Robertson H.M., Kennedy R.C., Elhaik E., RA Gerlach D., Kriventseva E.V., Elsik C.G., Graur D., Hill C.A., RA Veenstra J.A., Walenz B., Tubio J.M., Ribeiro J.M., Rozas J., RA Johnston J.S., Reese J.T., Popadic A., Tojo M., Raoult D., Reed D.L., RA Tomoyasu Y., Krause E., Mittapalli O., Margam V.M., Li H.M., RA Meyer J.M., Johnson R.M., Romero-Severson J., Vanzee J.P., RA Alvarez-Ponce D., Vieira F.G., Aguade M., Guirao-Rico S., Anzola J.M., RA Yoon K.S., Strycharz J.P., Unger M.F., Christley S., Lobo N.F., RA Seufferheld M.J., Wang N., Dasch G.A., Struchiner C.J., Madey G., RA Hannick L.I., Bidwell S., Joardar V., Caler E., Shao R., Barker S.C., RA Cameron S., Bruggner R.V., Regier A., Johnson J., Viswanathan L., RA Utterback T.R., Sutton G.G., Lawson D., Waterhouse R.M., Venter J.C., RA Strausberg R.L., Berenbaum M.R., Collins F.H., Zdobnov E.M., RA Pittendrigh B.R.; RT "Genome sequences of the human body louse and its primary endosymbiont RT provide insights into the permanent parasitic lifestyle."; RL Proc. Natl. Acad. Sci. U.S.A. 107:12168-12173(2010). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; DS235874; EEB19695.1; -; Genomic_DNA. DR RefSeq; XP_002432433.1; XM_002432388.1. DR EnsemblMetazoa; PHUM583990-RA; PHUM583990-PA; PHUM583990. DR GeneID; 8232525; -. DR KEGG; phu:Phum_PHUM583990; -. DR VectorBase; PHUM583990; Pediculus humanus. DR CTD; 8232525; -. DR InParanoid; E0W239; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG70W3CM; -. DR PhylomeDB; E0W239; -. DR Proteomes; UP000009046; Partially assembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR014001; Helicase_ATP-bd. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00487; DEXDc; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EEB19695.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000009046}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EEB19695.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EEB19695.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EEB19695.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000009046}. FT DOMAIN 7 270 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 236 270 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 747 AA; 85219 MW; 060CDA2045FB0EAF CRC64; MKLCVDGLLV YFPYDYIYPE QYAYMIELKK GLDAKGHCLL EMPSGTGKTT TLLSLVVSYM LTYPLDVTKL IYCSRTVPEI EKVVEELRLL FKYIEQETGK ATKMLGLVSK EREGKVVDGR CHSLTASYIR EQHRYNKSVP ICDFYEGFDC FGREDSVMPG AYSIDDIKNY AQTKGYCPYF LARHLIAQAN IIVYSYHYLL DPKIANVVSK ELTKTAVVVF DEAHNIDNVC IDSMSVKIHR RTIDKSTQAI QRLEKNIAEI KESDANKLKE EYNRLVAGLR EAGIARETDL ILANPVLPEE ILTESIPGNI RNAEHFISFL KRFVEYLKTR LRVQHVVQES PASFLKDVYG KVCIERKPLR FCAERLSSLL RTLEIADHTD FTSLVLVTHL ATLVSTYTKG FTIIIEPFDD KAPTVPNPIL HFSCLDSSIA MKPVFDRFQS VVITSGTLSP LDMYPKILDF HPVIMASFTM TLARPCLLPM IVSKGNDQVA ISSRFETRED VAVVRNYGQL LVEISSVVPD GVVCFFTSYL YLESVVASWY DQGVLNNLQK HKLLFIETQD AAETSLALLN YIKACESGRG AVLLSVARGK VSEGVDFDHH LGRAVLMFGI PYVYTQSRIL RARLDYLRDQ FQIRENDFLT FDAMRHAAQC VGRALRGKTD YGIMIFADKR FSRNDKRGKL PKWIQEHLKD NLCNLSTEEA VHMCKIWLRQ MAQDFTKKDQ LGVSLLTLEQ LNNEEIYEKI RQQAHQI // ID E1QRL8_VULDI Unreviewed; 625 AA. AC E1QRL8; DT 30-NOV-2010, integrated into UniProtKB/TrEMBL. DT 30-NOV-2010, sequence version 1. DT 11-MAY-2016, entry version 31. DE SubName: Full=DEAD_2 domain protein {ECO:0000313|EMBL:ADN51832.1}; GN OrderedLocusNames=Vdis_2467 {ECO:0000313|EMBL:ADN51832.1}; OS Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / OS IC-017). OC Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; OC Thermoproteaceae; Vulcanisaeta. OX NCBI_TaxID=572478 {ECO:0000313|EMBL:ADN51832.1, ECO:0000313|Proteomes:UP000006681}; RN [1] {ECO:0000313|Proteomes:UP000006681} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=DSM 14429 / JCM 11212 / NBRC 100878 / IC-017 RC {ECO:0000313|Proteomes:UP000006681}; RX DOI=10.4056/sigs.1113067; RA Mavromatis K., Sikorski J., Pabst E., Teshima H., Lapidus A., RA Lucas S., Nolan M., Glavina Del Rio T., Cheng J., Bruce D., RA Goodwin L., Pitluck S., Liolios K., Ivanova N., Mikhailova N., RA Pati A., Chen A., Palaniappan K., Land M., Hauser L., Chang Y., RA Jeffries C., Rohde M., Spring S., Goker M., Wirth R., Woyke T., RA Bristow J., Eisen J., Markowitz V., Hugenholtz P., Klenk H., RA Kyrpides N.; RT "Complete genome sequence of Vulcanisaeta distributa type strain (IC- RT 017T)."; RL Stand. Genomic Sci. 3:117-125(2010). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002100; ADN51832.1; -; Genomic_DNA. DR RefSeq; WP_013337557.1; NC_014537.1. DR STRING; 572478.Vdis_2467; -. DR EnsemblBacteria; ADN51832; ADN51832; Vdis_2467. DR GeneID; 9753427; -. DR KEGG; vdi:Vdis_2467; -. DR eggNOG; arCOG00770; Archaea. DR eggNOG; COG1199; LUCA. DR HOGENOM; HOG000222348; -. DR KO; K10844; -. DR OMA; RENYLTI; -. DR BioCyc; VDIS572478:GHT7-2516-MONOMER; -. DR Proteomes; UP000006681; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR003593; AAA+_ATPase. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR014001; Helicase_ATP-bd. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00382; AAA; 1. DR SMART; SM00487; DEXDc; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 2. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW Complete proteome {ECO:0000313|Proteomes:UP000006681}; KW Reference proteome {ECO:0000313|Proteomes:UP000006681}. FT DOMAIN 7 265 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 625 AA; 71317 MW; 5E28FFFCE305D641 CRC64; MSGIEALIRR YFPYDAFRKY QWEIAKTIYD ALSSGKVALI EAPTGVGKTA SALAASLAYA EESGVKVLFL IRTKNEAQAP IRELRRLRDK GVDVDFTIIR NRPDMCCMVS TRKLPYEEFL EECRLLRSSG ECPYYSNIRR INLNDLMLHI MDEASNVNEY VSTLCALNVC PYEVSRMYLD MAKVGVMTYY YIFSINRPES ININIRNSVL IIDEAHNLPD AISGLNSIDL PLTSVIASIA EVKKLIDDEE LRNRAIKILR GLQTYMVKLS KVLEEETMVS LELGDVLQFF EDFQAITNAY YEVIRKKRSA GVPIPYTPLS RLLDFHRAIL NKVSGFSVFL ARDEQGVSLV YKCVDPSVIS SPVINEANGV VLMSGTLPPR DYVTSMLGIN RDIMEYRIGF RDYVNPENYG VLIYDGVTTR YVERDEEEYA KIANVLSRIY QAYTPDKAIL SIFPSYTVLK SVRKYLSPNV KYIMELGSTS IDDLIKDLRS DRKKLIMAVA GGKLVEGVEY RLGSENLLGL IIIVGVPYPE PNDYLDDVME ILAARLNDRK LAWELTYQWP AIVRIKQAVG RAFRSESDRA LIILMDRRFK ETRLAKIFED YFGKYTVVDE EEMINEVLNF NVTPH // ID E1RJ02_METP4 Unreviewed; 668 AA. AC E1RJ02; DT 30-NOV-2010, integrated into UniProtKB/TrEMBL. DT 30-NOV-2010, sequence version 1. DT 11-MAY-2016, entry version 34. DE SubName: Full=DEAD_2 domain protein {ECO:0000313|EMBL:ADN36672.1}; GN OrderedLocusNames=Mpet_1921 {ECO:0000313|EMBL:ADN36672.1}; OS Methanolacinia petrolearia (strain DSM 11571 / OCM 486 / SEBR 4847) OS (Methanoplanus petrolearius). OC Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; OC Methanomicrobiaceae; Methanolacinia. OX NCBI_TaxID=679926 {ECO:0000313|EMBL:ADN36672.1, ECO:0000313|Proteomes:UP000006565}; RN [1] {ECO:0000313|EMBL:ADN36672.1, ECO:0000313|Proteomes:UP000006565} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=DSM 11571 / OCM 486 / SEBR 4847 RC {ECO:0000313|Proteomes:UP000006565}; RX PubMed=21304750; RA Brambilla E., Djao O.D., Daligault H., Lapidus A., Lucas S., RA Hammon N., Nolan M., Tice H., Cheng J.F., Han C., Tapia R., RA Goodwin L., Pitluck S., Liolios K., Ivanova N., Mavromatis K., RA Mikhailova N., Pati A., Chen A., Palaniappan K., Land M., Hauser L., RA Chang Y.J., Jeffries C.D., Rohde M., Spring S., Sikorski J., Goker M., RA Woyke T., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., RA Kyrpides N.C., Klenk H.P.; RT "Complete genome sequence of Methanoplanus petrolearius type strain RT (SEBR 4847)."; RL Stand. Genomic Sci. 3:203-211(2010). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002117; ADN36672.1; -; Genomic_DNA. DR STRING; 679926.Mpet_1921; -. DR EnsemblBacteria; ADN36672; ADN36672; Mpet_1921. DR KEGG; mpi:Mpet_1921; -. DR eggNOG; arCOG00770; Archaea. DR eggNOG; COG1199; LUCA. DR HOGENOM; HOG000237163; -. DR KO; K10844; -. DR OMA; FAVCGGK; -. DR BioCyc; MPET679926:GHOF-1961-MONOMER; -. DR Proteomes; UP000006565; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 2. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW Complete proteome {ECO:0000313|Proteomes:UP000006565}; KW Reference proteome {ECO:0000313|Proteomes:UP000006565}. FT DOMAIN 6 302 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 668 AA; 75825 MW; A051B1781C083419 CRC64; MYIMEGLKDW FPYESFRPYQ EEMLNTAGLC AEEGRICLID APTGSGKSSV VSALLAKANG KKIIIAVRTI SQLNIFLREL ELIKKKQSRL KVAYLVGKRN MCPMGIDGDV YRMCEGLKAF SSSLMRDRAH KGSLMPAGDP VIKNQLKRQD RDHPLLCPYF IRSRVFIEND GLKMTPSNLL RTKAEQVSKT LVPPEKIHEM CGELCPYEVM LQGARDADVI LMNFHHLFSE TIREQMYQSL NIEPSQTILL IDEAHNCGDT IQSIQSVSIN ERTVELSQNE LAHMRGRIGG VESIAAMLPQ VTAFMESLKR STKAEDWFDP VMFSKFLLRG SIYNRLDDIV DDLLRIYEAI REKKFQEGDF REIPTERIME FFLRILQAGT DPAYLSIYRK DEDVISLRVQ NIDPSSTLRD IAGVHAAVIM ISGTLSPVES FRKLYFRDAD ATTLSLPNAF PKKNRMVFCA GDITSAYSMR KDPDNHERIL GYIRSFAGLK GNLAVYFPSY ELLNIYSEDL PSKFNKKEVF IESQDTGTAA EDLKKFLSLP DSGKSGIIFG VCGGKWSEGL DYRGELLNGA LVIGLPLAPY NEVRRMIIQY FKNRFGEEGE FISYTLPAIN KALQALGRVL RTPDDRGVLV LGESRFLDKK IRKGLPEWMQ EELIECNLSS FTKDTERW // ID E2AAG2_CAMFO Unreviewed; 759 AA. AC E2AAG2; DT 30-NOV-2010, integrated into UniProtKB/TrEMBL. DT 30-NOV-2010, sequence version 1. DT 11-MAY-2016, entry version 30. DE SubName: Full=TFIIH basal transcription factor complex helicase subunit {ECO:0000313|EMBL:EFN69563.1}; GN ORFNames=EAG_04509 {ECO:0000313|EMBL:EFN69563.1}; OS Camponotus floridanus (Florida carpenter ant). OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; OC Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; OC Vespoidea; Formicidae; Formicinae; Camponotus. OX NCBI_TaxID=104421 {ECO:0000313|Proteomes:UP000000311}; RN [1] {ECO:0000313|EMBL:EFN69563.1, ECO:0000313|Proteomes:UP000000311} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=C129 {ECO:0000313|Proteomes:UP000000311}; RX PubMed=20798317; DOI=10.1126/science.1192428; RA Bonasio R., Zhang G., Ye C., Mutti N.S., Fang X., Qin N., Donahue G., RA Yang P., Li Q., Li C., Zhang P., Huang Z., Berger S.L., Reinberg D., RA Wang J., Liebig J.; RT "Genomic comparison of the ants Camponotus floridanus and Harpegnathos RT saltator."; RL Science 329:1068-1071(2010). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GL438125; EFN69563.1; -; Genomic_DNA. DR RefSeq; XP_011254454.1; XM_011256152.1. DR GeneID; 105250186; -. DR KEGG; cfo:105250186; -. DR InParanoid; E2AAG2; -. DR KO; K10844; -. DR Proteomes; UP000000311; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 2. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EFN69563.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000000311}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EFN69563.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EFN69563.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EFN69563.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000000311}. FT DOMAIN 7 302 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 759 AA; 87132 MW; 3F922A33869777F2 CRC64; MKISVDGLIV YFPYDYIYPE QYAYMLELKR GLDAKGHCLL EMPSGTGKTI TLLSLIVAYM LEHPLDVTKL IYCSRTVPEI EKVIEELKKL IDYYEKETKS KPKIVGLVLS SRKNMCIHPE VSREREGKIV DGRCHSLTAS YVRERHNYDE STPICSFYEG FDMEGREQII PPGIYSIDDL KDYGKDRNWC PYFLARFTIL HAQIVVYSYH YLLDPKIAET VSKELSKNSV VVFDEAHNID NVCIDSMSVK INRKLMEKSS TNIQLLEKTV AEMREVDVNK LKEEYNRLVE GLKDAQLQRE TDVILANPIL PNEVLEEVVP GNIRNAEHFV SFLKRFVEYL KTRLRVQHVV QESPAAFLRD IQAKVAIERK PLRFCAQRLA SLLRTMEITD LTDFSPIILV THLATLVSTY THGFTIIVEP FDDKTPTVLN PILHFSCLDS SIAVKPIFDR FQSVIITSGT LSPLDMYPKI LNFHPVIMSS FTMTLARPCL LPMIVGKGND QVTISSKYET REDVAVIRNY GQLLVEFAAT VPDGLVCFFT SYLYMESVVA AWYDQGVVDQ LQRHKLLFIE TQDSAETSLA LINYIKACEN GRGAVLLSVA RGKVSEGVDF DHHLGRAVLM FGIPYVYTQS RILKARLEYL RDQFQIREND FLTFDAMRHA AQCVGRAIRG KTDYGIMVFA DKRFSRIDKR SKLPKWIQEH LNDNLCNLST EEAIQISKRW LRQMAQPFTR ENQLGLSLLT REQLEKEEAA KIEQKAQQK // ID E2BBM2_HARSA Unreviewed; 735 AA. AC E2BBM2; DT 30-NOV-2010, integrated into UniProtKB/TrEMBL. DT 30-NOV-2010, sequence version 1. DT 11-MAY-2016, entry version 27. DE SubName: Full=TFIIH basal transcription factor complex helicase subunit {ECO:0000313|EMBL:EFN86899.1}; GN ORFNames=EAI_11959 {ECO:0000313|EMBL:EFN86899.1}; OS Harpegnathos saltator (Jerdon's jumping ant). OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; OC Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; OC Vespoidea; Formicidae; Ponerinae; Ponerini; Harpegnathos. OX NCBI_TaxID=610380 {ECO:0000313|Proteomes:UP000008237}; RN [1] {ECO:0000313|EMBL:EFN86899.1, ECO:0000313|Proteomes:UP000008237} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=R22 G/1 {ECO:0000313|EMBL:EFN86899.1, RC ECO:0000313|Proteomes:UP000008237}; RX PubMed=20798317; DOI=10.1126/science.1192428; RA Bonasio R., Zhang G., Ye C., Mutti N.S., Fang X., Qin N., Donahue G., RA Yang P., Li Q., Li C., Zhang P., Huang Z., Berger S.L., Reinberg D., RA Wang J., Liebig J.; RT "Genomic comparison of the ants Camponotus floridanus and Harpegnathos RT saltator."; RL Science 329:1068-1071(2010). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GL447128; EFN86899.1; -; Genomic_DNA. DR InParanoid; E2BBM2; -. DR Proteomes; UP000008237; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EFN86899.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000008237}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EFN86899.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EFN86899.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EFN86899.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000008237}. FT DOMAIN 1 259 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 735 AA; 84161 MW; 11A842135DC924A6 CRC64; MLELKRGLDA KGHCLLEMPS GTGKTITLLS LIVAYMLEYP LNVTKLIYCS RTVPEIEKVI EELKKLIDYY ETETKSKPKI VGLVLSSRKN MCIHPEVSRE REGKIVDGRC HSLTASYVRE RHNHDESTPI CNFYEGFDME GREQIVPPGI YSLDDLKDYG KDRGWCPYFL ARFTILHAQI VVYSYHYLLD PKIAETVSKE LSKSSVVVFD EAHNIDNVCI DSMSVKINKK LMERSTNNIQ LLEKTVAEMR DCDVNKLKEE YDRLVAGLRD AQLARETDVI LANPVLPDEI LEEIVPGNIR NAEHFVSFLK RFVEYLKTRL RVQHVMQESP AAFLRDIQAK VSIERKPLRF CAQRLASLLR TMEITDMTDF SPIILVTHLA TLVSTYTHGF TIIVEPFDDK TPTVLNPILH FSCLDSSIAI KPIFDRFQSV IITSGTLSPL DMYPKILNFH PVIMSSFTMT LARPCLLPMI VAKGNDQVAI SSKYETREDV AVIRNYGQLL VEFAATVPDG LVCFFTSYLY MESVVAAWYD QGVVDQLQRH KLLFIETQDS AETSLALINY IKACENGRGA VLLSVARGKV SEGVDFDHHL GRAVLMFGIP YVYTQSRILK ARLEYLRDQF QIRENDFLTF DAMRHAAQCV GRAIRGKTDY GIMVFADKRF SRVDKRSKLP KWIQEHLTDN FCNLSTEEAI QISKRWLRQM AQPFTRENQL GLSLLTREQL EKEETARIEE KAQQN // ID E3GL65_EUBLK Unreviewed; 785 AA. AC E3GL65; DT 11-JAN-2011, integrated into UniProtKB/TrEMBL. DT 11-JAN-2011, sequence version 1. DT 11-MAY-2016, entry version 29. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ADO36356.1}; GN OrderedLocusNames=ELI_1370 {ECO:0000313|EMBL:ADO36356.1}; OS Eubacterium limosum (strain KIST612). OC Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; OC Eubacterium. OX NCBI_TaxID=903814 {ECO:0000313|EMBL:ADO36356.1, ECO:0000313|Proteomes:UP000006873}; RN [1] {ECO:0000313|Proteomes:UP000006873} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=KIST612 {ECO:0000313|Proteomes:UP000006873}; RA Roh H., Ko H.-J., Kim D., Choi D.G., Park S., Kim S., Kim K.H., RA Chang I.S., Choi I.-G.; RT "The genome sequence of Eubacterium limosum (strain KIST612)."; RL Submitted (SEP-2010) to the EMBL/GenBank/DDBJ databases. RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=KIST612; RA Roh H., Ko H.-J., Kim D., Choi D.G., Park S., Kim S., Kim K.H., RA Chang I.S., Choi I.-G.; RL Submitted (SEP-2010) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002273; ADO36356.1; -; Genomic_DNA. DR RefSeq; WP_013379677.1; NC_014624.2. DR STRING; 903814.ELI_1370; -. DR EnsemblBacteria; ADO36356; ADO36356; ELI_1370. DR KEGG; elm:ELI_1370; -. DR PATRIC; 42605813; VBIEubLim172772_1264. DR eggNOG; ENOG4107QX6; Bacteria. DR eggNOG; COG1199; LUCA. DR HOGENOM; HOG000183657; -. DR OMA; DYNYYFD; -. DR BioCyc; ELIM903814:GH0C-1368-MONOMER; -. DR Proteomes; UP000006873; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW Complete proteome {ECO:0000313|Proteomes:UP000006873}; KW Reference proteome {ECO:0000313|Proteomes:UP000006873}. FT DOMAIN 182 432 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 785 AA; 89905 MW; 13B392642EAF737A CRC64; MAYEVVELSV RELVEFIMRS GSIDSRFGGF DRAAEGARIH RKLQKEAGEH YRAEVTLAET TDVKGFTFKI QGRADGIFEE DGIIVIDEIK TITRSLEDMD EDSRPVHWAQ AKCYGYIYGS QQGLDFIDIQ LTYYQIDTKE IRRFRKSFSV VELEDFYLAL LDAYIRWAEM QRQWVEKRDQ SIHALAFPYK TYRRGQREMA VAVFNTIKKS GKLFCQAPTG IGKTLSTLFP SVKALGGGMA EKLFYLTAKT ITRQAAVDAF TLMKEKGLAL RTVTLTAKDK ICFLDERSCN PDDCPYADGY FDRVGDVLYE VLQQDTVFSR ENIEAIALEN NLCPFEFSLD LTLWCDAIIC DYNYLFDPLV ALKRFFIDEK GDYVFLVDEA HNLVDRAREM YSAALRKSDF LNLKRQLTKT DKRLKEPLNK VNQAMIDLRK SCPDSRSRIS REELGDFNEL LGFFCFACED WQKKHPDHPA ADAVLELYFQ ARTYLKIAEF YDEHYITTIH TYGSEVIVKQ VCLDPALLLR VRLACGRASV LFSATLTPLE YFIAVLGGEE ETPRYELPSP FDPSKLGILL ADTISTRYVD REESYTPIAE MIAAFAAGKK GNYMAYFPSY AYLSAVYEVF GERFPDIRSM AQERDMDEAA REAFLEAFDA ENPETLIGFC VMGGIYSEGI DLKGDRLIGT VIVGVGLPQI GDERNIIRNY YDDKQGSGFA YAYQFPGMNK VLQAVGRVIR DEADRGMVLF IDSRFSSSGY RRLFPPHLSH YIKVRNAEDV RQETRAFWNE KEENE // ID E3MSM2_CAERE Unreviewed; 789 AA. AC E3MSM2; DT 11-JAN-2011, integrated into UniProtKB/TrEMBL. DT 11-JAN-2011, sequence version 1. DT 11-MAY-2016, entry version 34. DE SubName: Full=Putative uncharacterized protein {ECO:0000313|EMBL:EFP08424.1}; GN ORFNames=CRE_16215 {ECO:0000313|EMBL:EFP08424.1}; OS Caenorhabditis remanei (Caenorhabditis vulgaris). OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; OC Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. OX NCBI_TaxID=31234 {ECO:0000313|Proteomes:UP000008281}; RN [1] {ECO:0000313|Proteomes:UP000008281} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=PB4641 {ECO:0000313|Proteomes:UP000008281}; RG Caenorhabditis remanei Sequencing Consortium; RA Wilson R.K.; RT "PCAP assembly of the Caenorhabditis remanei genome."; RL Submitted (JUL-2007) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; DS268473; EFP08424.1; -; Genomic_DNA. DR RefSeq; XP_003100897.1; XM_003100849.1. DR STRING; 31234.CRE16215; -. DR EnsemblMetazoa; CRE16215; CRE16215; CRE16215. DR GeneID; 9815990; -. DR CTD; 9815990; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; E3MSM2; -. DR OMA; DEVWKYK; -. DR Proteomes; UP000008281; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 2. DR TIGRFAMs; TIGR00604; rad3; 2. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000008281}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000008281}. FT DOMAIN 7 281 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 276 303 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 789 AA; 90149 MW; E7202C932A0E0BA4 CRC64; MQLDIDGLKV LFPYDYVYPE QVLYMKEVKK ALDANGHGLL EMPSGTGKTV SLLSLVLAYM ISYPDRLDKL VYCSRTIPEI EKCVEEMKVL YDYWEKETGQ PVAKITVAMS ARKNLCINEK VAALRFGNTV DSACQKLTAS SVRAKRKENS EIEGCDYFEN FEANSFPMQN GVWNLEDLRQ LGRERKICPY FTARNAINRA HIVVYSYHYI LDPKIAELVS KDFSRKSVVV FDEAHNIDNV CIESMSVAIS QKNADRALQE LQNLEGVVGR MKSANSEKLQ SEYDKLVEGL KRAERERAND ERLANPCIPD DILKEAVPGN IRQANHFLLF LKRFVEYVRH RLRTHQLFHV DSPNSKQTNV GLLAIFHWSG SCFCSIYTFQ VLIESPAAFM KDIQERMCIE RRPMRFCAER LANLVRTLEI TDNGDVWALS QVTTMCTLVS TYSKGFSVIV EPQDGSQMAM ITLSCHDASI AIRPVLKRHQ SVIITSGTLS PLEMYPKILD FDPAVVASFT MTLARPCLAP LVVARGNDQV AMTSRFEQRA DVAVIRNYGN LVLEMASLVP DGMVVFFTSY LYMENVIGVW YEQHIIDELM KYKLLFIETN DALETSAALE KYVEACDSGR GAVLFSVARG KVSEGIDFSH HLGRCVIMLG IPYMYTESRV LRARLEYLRD TFGIRENDFL TFDAMRHTAQ CMGRALRSKT DYGLMVFADK RFSRNDKRGK LPRWMQEYLE PASTNLSIDE AAQVARRWLT LMAQPFQKEH QLGVSLLNKE MVQDQQMMKR FERVVEYVD // ID E3QRH1_COLGM Unreviewed; 791 AA. AC E3QRH1; DT 11-JAN-2011, integrated into UniProtKB/TrEMBL. DT 11-JAN-2011, sequence version 1. DT 11-MAY-2016, entry version 30. DE SubName: Full=DNA repair helicase {ECO:0000313|EMBL:EFQ33459.1}; GN ORFNames=GLRG_08738 {ECO:0000313|EMBL:EFQ33459.1}; OS Colletotrichum graminicola (strain M1.001 / M2 / FGSC 10212) (Maize OS anthracnose fungus) (Glomerella graminicola). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; OC Sordariomycetes; Hypocreomycetidae; Glomerellales; Glomerellaceae; OC Colletotrichum. OX NCBI_TaxID=645133 {ECO:0000313|Proteomes:UP000008782}; RN [1] {ECO:0000313|Proteomes:UP000008782} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=M1.001 / M2 / FGSC 10212 {ECO:0000313|Proteomes:UP000008782}; RX PubMed=22885923; DOI=10.1038/ng.2372; RA O'Connell R.J., Thon M.R., Hacquard S., Amyotte S.G., Kleemann J., RA Torres M.F., Damm U., Buiate E.A., Epstein L., Alkan N., RA Altmueller J., Alvarado-Balderrama L., Bauser C.A., Becker C., RA Birren B.W., Chen Z., Choi J., Crouch J.A., Duvick J.P., Farman M.A., RA Gan P., Heiman D., Henrissat B., Howard R.J., Kabbage M., Koch C., RA Kracher B., Kubo Y., Law A.D., Lebrun M.-H., Lee Y.-H., Miyara I., RA Moore N., Neumann U., Nordstroem K., Panaccione D.G., Panstruga R., RA Place M., Proctor R.H., Prusky D., Rech G., Reinhardt R., RA Rollins J.A., Rounsley S., Schardl C.L., Schwartz D.C., Shenoy N., RA Shirasu K., Sikhakolli U.R., Stueber K., Sukno S.A., Sweigard J.A., RA Takano Y., Takahara H., Trail F., van der Does H.C., Voll L.M., RA Will I., Young S., Zeng Q., Zhang J., Zhou S., Dickman M.B., RA Schulze-Lefert P., Ver Loren van Themaat E., Ma L.-J., RA Vaillancourt L.J.; RT "Lifestyle transitions in plant pathogenic Colletotrichum fungi RT deciphered by genome and transcriptome analyses."; RL Nat. Genet. 44:1060-1065(2012). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GG697370; EFQ33459.1; -; Genomic_DNA. DR RefSeq; XP_008097479.1; XM_008099288.1. DR EnsemblFungi; EFQ33459; EFQ33459; GLRG_08738. DR GeneID; 24414103; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000008782; Unassembled WGS sequence. DR GO; GO:0000439; C:core TFIIH complex; IEA:EnsemblFungi. DR GO; GO:0005675; C:holo TFIIH complex; IEA:EnsemblFungi. DR GO; GO:0000112; C:nucleotide-excision repair factor 3 complex; IEA:EnsemblFungi. DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:EnsemblFungi. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0043141; F:ATP-dependent 5'-3' DNA helicase activity; IEA:EnsemblFungi. DR GO; GO:0003684; F:damaged DNA binding; IEA:EnsemblFungi. DR GO; GO:0033683; P:nucleotide-excision repair, DNA incision; IEA:EnsemblFungi. DR GO; GO:0070816; P:phosphorylation of RNA polymerase II C-terminal domain; IEA:EnsemblFungi. DR GO; GO:0045951; P:positive regulation of mitotic recombination; IEA:EnsemblFungi. DR GO; GO:0010525; P:regulation of transposition, RNA-mediated; IEA:EnsemblFungi. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:EnsemblFungi. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EFQ33459.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000008782}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EFQ33459.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EFQ33459.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EFQ33459.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000008782}. FT DOMAIN 7 284 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 255 297 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 791 AA; 90483 MW; 0DC243C68939FE58 CRC64; MKFFIDELPV IFPYPRIYPE QYAYMCDLKK TLDAGGHCVL EMPSGTGKTV SLLSLIVAYQ QHNPEHRKLI YCSRTMSEIE KALAELKALM KYRAEELGEE EEFRGLGLTS RKNLCLHPSV KQEKSGAIVD ARCRSLTAGF VKEKKDRGES VDVCVYHDNL DLLEPHNLIP NGVWTFEGLL RYGEQHKQCP YFTARRMMQF CNVIIYSYHY LLDPKIAERV SRELSKDCIV VFDEAHNIDN VCIESLSTDI TEDSLRKATR GAQNLERRIA EMRDTDQEQL QNEYQKLVEG LRGADEARQE DAFMANPALP DDLLKEAVPG NIRRAEHFVS FLKRFIEYLK TRMKVRHTIS ETPPSFLAHL KEYTFIEKKP LRFCAERLTS LVRTLELTNI EDYQPLQEVA TFATLVATYE KGFLLILEPF ESETAEVPNP VLHFTCLDAA IAIKPVFDRF SSVIITSGTM SPLEMYPKML GFSTVVQESY SMTLARRSFL PMIVTRGSDQ SSISTSFQVR NEPSVVRNYG TLLTEFAKIT PDGMVVFFPS YLYMESIISM WQGMNILEEV WKYKLILVET PDAQETSLAL ETYRTACCNG RGAILLCVAR GKVSEGIDFD HQYGRTVLCI GVPFQYTESR ILKARLEFLR ETYRIRENDF LSFDAMRHAA QCLGRVLRGK DDYGIMVLAD RRFQKKRAQL PKWINQGLLD ADTNVSTDMA VSSARRFLKQ MAQPFRAKDQ EGVSTWSYED LMKHKEKMDL ERIQELEEAG AGGDGYGADG GDEYGINDDL DDDLMEIDDG F // ID E3SAU9_PYRTT Unreviewed; 796 AA. AC E3SAU9; DT 11-JAN-2011, integrated into UniProtKB/TrEMBL. DT 11-JAN-2011, sequence version 1. DT 11-MAY-2016, entry version 32. DE SubName: Full=Putative uncharacterized protein {ECO:0000313|EMBL:EFQ84891.1}; GN ORFNames=PTT_20325 {ECO:0000313|EMBL:EFQ84891.1}; OS Pyrenophora teres f. teres (strain 0-1) (Barley net blotch fungus) OS (Drechslera teres f. teres). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; OC Dothideomycetes; Pleosporomycetidae; Pleosporales; Pleosporineae; OC Pleosporaceae; Pyrenophora. OX NCBI_TaxID=861557 {ECO:0000313|Proteomes:UP000001067}; RN [1] {ECO:0000313|EMBL:EFQ84891.1, ECO:0000313|Proteomes:UP000001067} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=0-1 {ECO:0000313|EMBL:EFQ84891.1, RC ECO:0000313|Proteomes:UP000001067}; RX PubMed=21067574; DOI=10.1186/gb-2010-11-11-r109; RA Ellwood S.R., Liu Z., Syme R.A., Lai Z., Hane J.K., Keiper F., RA Moffat C.S., Oliver R.P., Friesen T.L.; RT "A first genome assembly of the barley fungal pathogen Pyrenophora RT teres f. teres."; RL Genome Biol. 11:R109.1-R109.14(2010). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GL538173; EFQ84891.1; -; Genomic_DNA. DR RefSeq; XP_003307004.1; XM_003306956.1. DR STRING; 861557.XP_003307004.1; -. DR EnsemblFungi; EFQ84891; EFQ84891; PTT_20325. DR GeneID; 10517181; -. DR KEGG; pte:PTT_20325; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR KO; K10844; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000001067; Unassembled WGS sequence. DR GO; GO:0005829; C:cytosol; IEA:EnsemblFungi. DR GO; GO:0000112; C:nucleotide-excision repair factor 3 complex; IEA:EnsemblFungi. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0000717; P:nucleotide-excision repair, DNA duplex unwinding; IEA:EnsemblFungi. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000001067}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000001067}. FT DOMAIN 7 295 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 796 AA; 90665 MW; 3E9962ACCEEC1846 CRC64; MKFYIDNLPV LFPYPRVYPE QYAYMCDLKR TLDQGGHCVL EMPSGTGKTV SLLSLIVAYQ QHYPEKRKLI YCSRTMSEIE KALAELKALM KYRTTELGYE EDFRGLGLTS RKNLCLHPSV KREKSGTVVD ARCRSLTAGF VKEKKERGEP VELCVYHENL DLLEPHNLIP PGVWTFDGML KYGEQQKQCP YFTARRMMPH CNVIIYSYHY LLDPKIADRV SKELSKDCIV VFDEAHNIDN VCIESLSIDL TEDVLRKATK GVNNLDRKIT EMKSSDAEKL QNEYAKLVEG LRAADEARNE DAFMANPALP DDLLTEAVPG NIRRAEHFVA FLKRFIEYLK TRMKVLNVVA DTPPEFLKHL RDLTFIERKP LRFCAERLTS LVRTLELTNI EDYQPLQEVA TFATLVATYE TGFLLIIEPF ESATATVPNP VLHLTCLDAA IAIKPVFERF YSVIVTSGTM SPLDMYPRML NFNTVVQESF TMTLTRKSFL PMIVDRGNDQ NQVTSQFEHR NDLQVQRNFG NLLIEFCKLT PDGVVVFFPS YLYMESIISA WQGMEILDTV WKYKLILVET PDAQETALAL ETFRTACNNG RGAVLLCVAR GKVSEGIDFD HHYGRTVICM GVPYQYTESR ILKARLEFLR ETYRIKEADF LSFDAMRHAA QCLGRVIRGK DDYGIMVLAD KRFNKKQTQL PKWIQQGLDA KSTKLSIDQA VGAAKNFLKE MSIPWSRAEQ EGHSSWSLED LEAHQRKKAA QGISGTDNPA MRALEGRAEI ERVEVEEVDE FGGSAAVDAV MAEVDA // ID E4Y1G1_OIKDI Unreviewed; 760 AA. AC E4Y1G1; DT 08-FEB-2011, integrated into UniProtKB/TrEMBL. DT 08-FEB-2011, sequence version 1. DT 11-MAY-2016, entry version 27. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CBY15705.1}; GN ORFNames=GSOID_T00014013001 {ECO:0000313|EMBL:CBY15705.1}; OS Oikopleura dioica (Tunicate). OC Eukaryota; Metazoa; Chordata; Tunicata; Appendicularia; Oikopleuridae; OC Oikopleura. OX NCBI_TaxID=34765 {ECO:0000313|EMBL:CBY15705.1, ECO:0000313|Proteomes:UP000001307}; RN [1] {ECO:0000313|EMBL:CBY15705.1, ECO:0000313|Proteomes:UP000001307} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RX PubMed=21097902; DOI=10.1126/science.1194167; RA Denoeud F., Henriet S., Mungpakdee S., Aury J.M., Da Silva C., RA Brinkmann H., Mikhaleva J., Olsen L.C., Jubin C., Canestro C., RA Bouquet J.M., Danks G., Poulain J., Campsteijn C., Adamski M., RA Cross I., Yadetie F., Muffato M., Louis A., Butcher S., RA Tsagkogeorga G., Konrad A., Singh S., Jensen M.F., Cong E.H., RA Eikeseth-Otteraa H., Noel B., Anthouard V., Porcel B.M., RA Kachouri-Lafond R., Nishino A., Ugolini M., Chourrout P., Nishida H., RA Aasland R., Huzurbazar S., Westhof E., Delsuc F., Lehrach H., RA Reinhardt R., Weissenbach J., Roy S.W., Artiguenave F., RA Postlethwait J.H., Manak J.R., Thompson E.M., Jaillon O., RA Du Pasquier L., Boudinot P., Liberles D.A., Volff J.N., Philippe H., RA Lenhard B., Roest Crollius H., Wincker P., Chourrout D.; RT "Plasticity of animal genome architecture unmasked by rapid evolution RT of a pelagic tunicate."; RL Science 330:1381-1385(2010). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FN653622; CBY15705.1; -; Genomic_DNA. DR InParanoid; E4Y1G1; -. DR Proteomes; UP000001307; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR014001; Helicase_ATP-bd. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00487; DEXDc; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000001307}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000001307}. FT DOMAIN 7 289 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 760 AA; 85700 MW; A0455880F862F647 CRC64; MHLDIEGIPV LFPFDYVYPE QLAYMRELKY SIENRGHALI EMPCGTGKTV TILSFLLAYK KAHPASLEKI IYCTRTVPEL TKVVEELRDL VKFYADNDQH LDILSMSLSS RQNLCINSEV TSCGGRIEVD TECRRRTATF ARRNAKMSPN AENPSCSYFE NLENSTLSAK LPRTIYNLED IKEFGKEETI CPYFMAREAI NLADVVIYSY NYLLDPKISS VVSKSLPRNS IVVFDEAHNI DSVCIKSLSV KITKRTIERA SDGLEKLTAR VDEFSISKKE ELEDEYDRLV RGLREARQNE DAGLGGPPIL PDDVLTTAIP GSIRKAPIFC KWVKRLLEYC GHRLRIQQAI QESPLSFLRD IEERVCIDRK SLRIAGERLQ NLIITLEMVD LSGLKEVNDI INMAALAATY TEGFAILFEA IDERGIPDPR IQLACLDASL VMRPIFRKYQ SVLITSGTLS PIEMYPRLLD FQPVVMTSLA LSMARGAICP MIVARGNDQV SLSSKFDERE DPSVLRNYGN LLVEICGVVP DGVVVFFTSY SYLENVVSMW NETGIIEGIQ KNKIIFCESS DITETSQALS RYREACDEGR GAVLLSVARG KVSEGIDFSG HYGRAVLVLG IPFIFTQSRI LRARLDFLRT KIQVREQEFL VFDAMRQTAQ CLGRAIRAKS DYGIMLLADV RFGTPGKYNK LPKWLTDSLS QGSLSLSIED SIALSKKFLR QMAQPFPRSA QLGISLLNAE QAEQYLRRIK NEAAFARTIR // ID E4ZWB6_LEPMJ Unreviewed; 792 AA. AC E4ZWB6; DT 08-FEB-2011, integrated into UniProtKB/TrEMBL. DT 08-FEB-2011, sequence version 1. DT 11-MAY-2016, entry version 34. DE SubName: Full=Similar to TFIIH basal transcription factor complex helicase subunit {ECO:0000313|EMBL:CBX95892.1}; GN ORFNames=LEMA_P030440.1 {ECO:0000313|EMBL:CBX95892.1}; OS Leptosphaeria maculans (strain JN3 / isolate v23.1.3 / race OS Av1-4-5-6-7-8) (Blackleg fungus) (Phoma lingam). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; OC Dothideomycetes; Pleosporomycetidae; Pleosporales; Pleosporineae; OC Leptosphaeriaceae; Leptosphaeria; Leptosphaeria maculans complex. OX NCBI_TaxID=985895 {ECO:0000313|Proteomes:UP000002668}; RN [1] {ECO:0000313|Proteomes:UP000002668} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=JN3 / isolate v23.1.3 / race Av1-4-5-6-7-8 RC {ECO:0000313|Proteomes:UP000002668}; RX PubMed=21326234; DOI=10.1038/ncomms1189; RA Rouxel T., Grandaubert J., Hane J.K., Hoede C., van de Wouw A.P., RA Couloux A., Dominguez V., Anthouard V., Bally P., Bourras S., RA Cozijnsen A.J., Ciuffetti L.M., Degrave A., Dilmaghani A., Duret L., RA Fudal I., Goodwin S.B., Gout L., Glaser N., Linglin J., Kema G.H.J., RA Lapalu N., Lawrence C.B., May K., Meyer M., Ollivier B., Poulain J., RA Schoch C.L., Simon A., Spatafora J.W., Stachowiak A., Turgeon B.G., RA Tyler B.M., Vincent D., Weissenbach J., Amselem J., Quesneville H., RA Oliver R.P., Wincker P., Balesdent M.-H., Howlett B.J.; RT "Effector diversification within compartments of the Leptosphaeria RT maculans genome affected by Repeat-Induced Point mutations."; RL Nat. Commun. 2:202-202(2011). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FP929127; CBX95892.1; -; Genomic_DNA. DR RefSeq; XP_003839371.1; XM_003839323.1. DR EnsemblFungi; CBX95892; CBX95892; LEMA_P030440.1. DR GeneID; 13281422; -. DR InParanoid; E4ZWB6; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000002668; Genome. DR GO; GO:0000439; C:core TFIIH complex; IEA:EnsemblFungi. DR GO; GO:0005675; C:holo TFIIH complex; IEA:EnsemblFungi. DR GO; GO:0000112; C:nucleotide-excision repair factor 3 complex; IEA:EnsemblFungi. DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:EnsemblFungi. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0043141; F:ATP-dependent 5'-3' DNA helicase activity; IEA:EnsemblFungi. DR GO; GO:0003684; F:damaged DNA binding; IEA:EnsemblFungi. DR GO; GO:0033683; P:nucleotide-excision repair, DNA incision; IEA:EnsemblFungi. DR GO; GO:0070816; P:phosphorylation of RNA polymerase II C-terminal domain; IEA:EnsemblFungi. DR GO; GO:0045951; P:positive regulation of mitotic recombination; IEA:EnsemblFungi. DR GO; GO:0010525; P:regulation of transposition, RNA-mediated; IEA:EnsemblFungi. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:EnsemblFungi. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CBX95892.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000002668}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:CBX95892.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CBX95892.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CBX95892.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000002668}. FT DOMAIN 7 287 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 792 AA; 90399 MW; 0B56700AA5803D4E CRC64; MKFFIDTLPV LFPYPRVYPE QYAYMCDLKR TLDQGGHCVL EMPSGTGKTV SLLSLIVAYQ QHYPEKRKLI YCSRTMSEIE KALAELKALM KYRTQELGYE EEFRGLGLTS RKNLCLHPSV KREKSGSIVD ARCRSLTAGF VKEKKERGED VELCVYHDNL DLLEPHNLIP PGVWTFDGML KYGEQQKQCP YFTARRMMPY CNVIIYSYHY LLDPKIADRV SKELSKDCIV VFDEAHNIDN VCIESLSIDL TEDVLRKATK GVNNLDRKIT EMKSTDAEKL QNEYAKLVDG LRSADEARSE EAFMANPVLP DDLLTEAVPG NIRRAEHFVA FLKRFIEYLK TRMKVLNVVS DTPPAFLSHL RDLTYIERKP LRFCAERLTS LVRTLELTSI EDYQPLQEVA TFATLVATYE TGFLIIIEPF ESATATVPNP ILHLTCLDAA IAIKPVFERF YSVIVTSGTM SPLDMYPRML NFNTVVQESF TMTLTRKSFL PMIVDRGNDQ NQITSQFEHR NDLQVQRNFG NLLIEFCKLT PDGVVVFFPS YLYMESIISA WQGMEILDTV WKYKLILVET PDAQETALAL ETFRTACNNG RGAVLLCVAR GKVSEGIDFD HHYGRTVLCM GVPYQYTESR ILKARLEFLR ETYRIKEADF LSFDAMRHAA QCLGRVIRGK DDYGIMVLAD KRFNKKQSQL PKWIQHGLDA KSTKLSIDQA VSTAKAFLRD MSVPWSRAEQ EGHSSWSLED LEAHQRKMAL HGIAGTENPD MRKAEGRAEV ERMEVDDEFG GADLDAAMAD LA // ID E5R1U7_ARTGP Unreviewed; 790 AA. AC E5R1U7; DT 08-FEB-2011, integrated into UniProtKB/TrEMBL. DT 08-FEB-2011, sequence version 1. DT 11-MAY-2016, entry version 30. DE SubName: Full=DNA repair helicase RAD3 {ECO:0000313|EMBL:EFQ98581.1}; GN ORFNames=MGYG_01607 {ECO:0000313|EMBL:EFQ98581.1}; OS Arthroderma gypseum (strain ATCC MYA-4604 / CBS 118893) (Microsporum OS gypseum). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; OC Eurotiomycetidae; Onygenales; Arthrodermataceae; Microsporum. OX NCBI_TaxID=535722 {ECO:0000313|Proteomes:UP000002669}; RN [1] {ECO:0000313|Proteomes:UP000002669} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC MYA-4604 / CBS 118893 {ECO:0000313|Proteomes:UP000002669}; RX PubMed=22951933; DOI=10.1128/mBio.00259-12; RA Martinez D.A., Oliver B.G., Graeser Y., Goldberg J.M., Li W., RA Martinez-Rossi N.M., Monod M., Shelest E., Barton R.C., Birch E., RA Brakhage A.A., Chen Z., Gurr S.J., Heiman D., Heitman J., Kosti I., RA Rossi A., Saif S., Samalova M., Saunders C.W., Shea T., RA Summerbell R.C., Xu J., Young S., Zeng Q., Birren B.W., Cuomo C.A., RA White T.C.; RT "Comparative genome analysis of Trichophyton rubrum and related RT dermatophytes reveals candidate genes involved in infection."; RL MBio 3:E259-E259(2012). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; DS989822; EFQ98581.1; -; Genomic_DNA. DR RefSeq; XP_003177533.1; XM_003177485.1. DR STRING; 535722.XP_003177533.1; -. DR EnsemblFungi; EFQ98581; EFQ98581; MGYG_01607. DR GeneID; 10032863; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; E5R1U7; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000002669; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EFQ98581.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000002669}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EFQ98581.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EFQ98581.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EFQ98581.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000002669}. FT DOMAIN 7 295 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 277 300 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 790 AA; 89971 MW; E7B8539AB31AF295 CRC64; MEFLIDDLPI LFPYPRIYPE QYAYMCDLKK VLDAGGHCVL EMPSGTGKTI TLLALIVAYQ QHYPEHRKLI YCSRTMSEIE KALNELRALM KYRSQKLGVV EDFRALGLTS RKNLCLHPSV KREKSGAVVD ARCRSLTAGF IKEKKEKGED VELCIYHENL DLLEPSNLVP PGVFTLDGLI KYGEQHKQCP YFSARRMMPY CNVIIYSYHY LLDPKIAERV SKELSRDSII VFDEAHNIDN VCIESLSIDL TEDSLRKAGR GASNLERKID EMKSSDADKL QNEYQKLVEG LREADEAREE EQLMANPVLP DDLLKESVPG NIRRAEHFVA FLKRFIEYLK TRMKVTHTIS ETPLSFLSHL KDLTFIERKP LRFCAERLTS LVRTLELVNI EDYQPLQEVA TFATLAATYE KGFLLILEPF ESDTATVPNP ILHFTCLDAA IAIKPVFDRF SSVIITSGTL SPLEMYPKML GFDAALQESY SMTLARRSFL PMIVTRGSDQ AQISSSFQIR NDPGVVRNYG NMLLEFCRIT PDGVVVFFPS YLYMESIISM WQGMGILDSV WNYKLILVET PDSQESSLAL ETYRTACCNG RGAVLLCVAR GKVSEGIDFD HHYGRTVLCI GVPFQYTESR ILKARLEFLR ENYRIRENDF LSFDALRHAA QCLGRVLRGK DDYGVMVLAD RRFQKKRNQL PKWISQAMLE SETNLSTDMA VATAKSFLKS MAQPFKAKDQ EGISTWSLED LKRHLEKQKQ ESEKEQGNKM ALTATNTGVA DTAMGDDEDF NEDLLAELES // ID E5S390_TRISP Unreviewed; 777 AA. AC E5S390; DT 08-MAR-2011, integrated into UniProtKB/TrEMBL. DT 08-MAR-2011, sequence version 1. DT 11-MAY-2016, entry version 33. DE SubName: Full=TFIIH basal transcription factor complex helicase subunit {ECO:0000313|EMBL:EFV60753.1}; GN ORFNames=Tsp_03297 {ECO:0000313|EMBL:EFV60753.1}; OS Trichinella spiralis (Trichina worm). OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia; OC Trichocephalida; Trichinellidae; Trichinella. OX NCBI_TaxID=6334 {ECO:0000313|EMBL:EFV60753.1, ECO:0000313|Proteomes:UP000006823}; RN [1] {ECO:0000313|EMBL:EFV60753.1, ECO:0000313|Proteomes:UP000006823} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ISS 195 {ECO:0000313|EMBL:EFV60753.1, RC ECO:0000313|Proteomes:UP000006823}; RX PubMed=21336279; DOI=10.1038/ng.769; RA Mitreva M., Jasmer D.P., Zarlenga D.S., Wang Z., Abubucker S., RA Martin J., Taylor C.M., Yin Y., Fulton L., Minx P., Yang S.P., RA Warren W.C., Fulton R.S., Bhonagiri V., Zhang X., Hallsworth-Pepin K., RA Clifton S.W., McCarter J.P., Appleton J., Mardis E.R., Wilson R.K.; RT "The draft genome of the parasitic nematode Trichinella spiralis."; RL Nat. Genet. 43:228-235(2011). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:EFV60753.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ABIR02000343; EFV60753.1; -; Genomic_DNA. DR RefSeq; XP_003379641.1; XM_003379593.1. DR STRING; 6334.EFV60753; -. DR EnsemblMetazoa; EFV60753; EFV60753; EFV60753. DR GeneID; 10908793; -. DR KEGG; tsp:Tsp_03297; -. DR CTD; 10908793; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; E5S390; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR Proteomes; UP000006823; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 2. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EFV60753.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000006823}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EFV60753.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EFV60753.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EFV60753.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000006823}. FT DOMAIN 22 300 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 777 AA; 88968 MW; B21C34E8948A7E0A CRC64; MSQFSGSSHN LGRITMRIDV DGLSVIFPYE FIYPEQYYYM LQLKRTLDAR GHCLLEMPSG TGKTASLLSL VIAYVKAYPS QLEKLIYCSR TIPEISKVVE ELRHLCDSYE KETGESLNIV GLAMSARKNM CIHPEVSKLR LGKIVDGHCL SLTSSFVRAR RLDDPSIPCC NYFEEFMEEG VESALPRGVY NLDDLKAYGR RMGWCPYFVA RHALLRADVI VYSYHYLLDP KIAELISKDL SRRSVVVFDE AHNIDNVCIE SLSVTLKKRT IERCQENLES LQKFVKETKE RDVAHLDREY KRLVEGLREA KHLRDTDKIL ANPVLPDDIL EEAVPGSIRN AEHFIAFLRR FLNYVKHRMS SNSVMIENPA VFLSDVQIRT AIERKPLRFC SERLASLLRT LELSDTSNFA PLILLANFAT LVSTYAKGFC LLFEPFDEKL PTVPNPVMTF SCMDASIAIR PTLSPLDMYP KILNFDPAVM ASFSMTLARP CILPLIVAKG NDQITMTSKF EARDDTSVIR NYGTLLLELS RIVPDGIVCF FTSYMYMENT VAFWYKQGII DRIMKNKLLF IETQDIIETS LALQNYIKAC ENGRGAILLS VARGKVSEGV DFSDHLGRAV VMLGVPYVYT ESRIIRARLE YLRDQFNIKE NDFLTFDAMR QAAQCVGRAL RNKTDYGLMI FADKAFRVLN DGTVLQRYSR SDKREKLPKW IQEQLSASNL DLSIEEALQI SRRWLRTMAQ PFTQNDQLGI SMLNQTQITD EQMKRKLTNE AYLMELQ // ID E6ZNU7_SPORE Unreviewed; 847 AA. AC E6ZNU7; DT 08-MAR-2011, integrated into UniProtKB/TrEMBL. DT 08-MAR-2011, sequence version 1. DT 11-MAY-2016, entry version 28. DE SubName: Full=Probable RAD3-DNA helicase/ATPase {ECO:0000313|EMBL:CBQ68748.1}; GN ORFNames=sr15030 {ECO:0000313|EMBL:CBQ68748.1}; OS Sporisorium reilianum (strain SRZ2) (Maize head smut fungus). OC Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; OC Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Sporisorium. OX NCBI_TaxID=999809 {ECO:0000313|EMBL:CBQ68748.1, ECO:0000313|Proteomes:UP000008867}; RN [1] {ECO:0000313|EMBL:CBQ68748.1, ECO:0000313|Proteomes:UP000008867} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=SRZ2 {ECO:0000313|Proteomes:UP000008867}; RX PubMed=21148393; DOI=10.1126/science.1195330; RA Schirawski J., Mannhaupt G., Muench K., Brefort T., Schipper K., RA Doehlemann G., Di Stasio M., Roessel N., Mendoza-Mendoza A., RA Pester D., Mueller O., Winterberg B., Meyer E., Ghareeb H., RA Wollenberg T., Muensterkoetter M., Wong P., Walter M., Stukenbrock E., RA Gueldener U., Kahmann R.; RT "Pathogenicity determinants in smut fungi revealed by genome RT comparison."; RL Science 330:1546-1548(2010). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FQ311433; CBQ68748.1; -; Genomic_DNA. DR EnsemblFungi; CBQ68748; CBQ68748; sr15030. DR InParanoid; E6ZNU7; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000008867; Chromosome 12. DR GO; GO:0000439; C:core TFIIH complex; IEA:EnsemblFungi. DR GO; GO:0005829; C:cytosol; IEA:EnsemblFungi. DR GO; GO:0005675; C:holo TFIIH complex; IEA:EnsemblFungi. DR GO; GO:0000112; C:nucleotide-excision repair factor 3 complex; IEA:EnsemblFungi. DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:EnsemblFungi. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0043141; F:ATP-dependent 5'-3' DNA helicase activity; IEA:EnsemblFungi. DR GO; GO:0003684; F:damaged DNA binding; IEA:EnsemblFungi. DR GO; GO:0000717; P:nucleotide-excision repair, DNA duplex unwinding; IEA:EnsemblFungi. DR GO; GO:0033683; P:nucleotide-excision repair, DNA incision; IEA:EnsemblFungi. DR GO; GO:0070816; P:phosphorylation of RNA polymerase II C-terminal domain; IEA:EnsemblFungi. DR GO; GO:0045951; P:positive regulation of mitotic recombination; IEA:EnsemblFungi. DR GO; GO:0010525; P:regulation of transposition, RNA-mediated; IEA:EnsemblFungi. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:EnsemblFungi. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CBQ68748.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000008867}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:CBQ68748.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CBQ68748.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CBQ68748.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000008867}. FT DOMAIN 7 319 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 847 AA; 96464 MW; 24171CAF46C5F2E3 CRC64; MKFYIDELPV LFPYPKIYPE QYAYMTDLKR TLDANGHCVL EMPSGTGKTV SLLSLIVSYQ LFHPAKRKLI YCSRTVPEIE KALAELKRLM EYRARYNVKE GEESEVLKNE AEGSNGPGEH NVEMKGKGKA GGQMEDILAL GLSSRKNLCI HPDVSRERKG KVVDARCRDM TSSWACEKGR QDPGTVELCD FHEKLGKMEP GQLIPQGVRT LEEVKEYARD KGICPYFAIR RMLPFVDIII YSFHYLLDPK IAEQVSKEMS KDAIVVFDEA HNIDNVCIES LSIDLTRPML DSAYRSINQL SEHVDEIKKT DASKLQDEYA RLVEGLQEQG EQREAESFMA NPVLPDDLLQ EAVPGNIRRA EHFVAFLKRF VEYLKTRMRV LHVVAETPAS FLQHLKDITY IERKPLRFCA ERLRMLVSTL ELTRLDEFSA LQKVAAFATL VATYDKGFLL ILEPFETENA TVPNPIFHFT CLDASLAIAP VFERFSSVII TSGTISPLDM YPKMLKFDAI VQESYAMTLT RQCFLPLVIT RGSDQVAISS RFEVRNDPAV VRNYGSILIE YAKCVPDGIV AFFPSYLYME SIVAAWHDMG ILDEVWKYKL IFIETPDAPE TSIALENYRR ACDNGRGAIL LSVARGKVSE GIDFDHNYGR AVIMFGVPYQ YTESRILKAR LEFLRDNFRI RENDFLTFDA MRHAAQCVGR VLRGKTDYGL MVFADKRFAR ADKRNKLPKW IAQYIKETHS NLSTDMAIVE SKLFIRSMAQ PYPEGKNGVS LWELADIESR QAKERETFAK LMGGQLKVDA NGEVVDKDDS DSAMDDAAKH EDDFDKEFGE GHDLVQISEM DHVMQEV // ID E7EVE9_HUMAN Unreviewed; 682 AA. AC E7EVE9; DT 08-MAR-2011, integrated into UniProtKB/TrEMBL. DT 08-MAR-2011, sequence version 1. DT 11-MAY-2016, entry version 43. DE SubName: Full=TFIIH basal transcription factor complex helicase XPD subunit {ECO:0000313|Ensembl:ENSP00000375808}; GN Name=ERCC2 {ECO:0000313|Ensembl:ENSP00000375808}; OS Homo sapiens (Human). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; OC Catarrhini; Hominidae; Homo. OX NCBI_TaxID=9606 {ECO:0000313|Ensembl:ENSP00000375808, ECO:0000313|Proteomes:UP000005640}; RN [1] {ECO:0000313|Ensembl:ENSP00000375808, ECO:0000313|Proteomes:UP000005640} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RX PubMed=15057824; DOI=10.1038/nature02399; RA Grimwood J., Gordon L.A., Olsen A.S., Terry A., Schmutz J., RA Lamerdin J.E., Hellsten U., Goodstein D., Couronne O., Tran-Gyamfi M., RA Aerts A., Altherr M., Ashworth L., Bajorek E., Black S., Branscomb E., RA Caenepeel S., Carrano A.V., Caoile C., Chan Y.M., Christensen M., RA Cleland C.A., Copeland A., Dalin E., Dehal P., Denys M., Detter J.C., RA Escobar J., Flowers D., Fotopulos D., Garcia C., Georgescu A.M., RA Glavina T., Gomez M., Gonzales E., Groza M., Hammon N., Hawkins T., RA Haydu L., Ho I., Huang W., Israni S., Jett J., Kadner K., Kimball H., RA Kobayashi A., Larionov V., Leem S.-H., Lopez F., Lou Y., Lowry S., RA Malfatti S., Martinez D., McCready P.M., Medina C., Morgan J., RA Nelson K., Nolan M., Ovcharenko I., Pitluck S., Pollard M., RA Popkie A.P., Predki P., Quan G., Ramirez L., Rash S., Retterer J., RA Rodriguez A., Rogers S., Salamov A., Salazar A., She X., Smith D., RA Slezak T., Solovyev V., Thayer N., Tice H., Tsai M., Ustaszewska A., RA Vo N., Wagner M., Wheeler J., Wu K., Xie G., Yang J., Dubchak I., RA Furey T.S., DeJong P., Dickson M., Gordon D., Eichler E.E., RA Pennacchio L.A., Richardson P., Stubbs L., Rokhsar D.S., Myers R.M., RA Rubin E.M., Lucas S.M.; RT "The DNA sequence and biology of human chromosome 19."; RL Nature 428:529-535(2004). RN [2] {ECO:0000213|PubMed:21269460} RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. RX PubMed=21269460; DOI=10.1186/1752-0509-5-17; RA Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P., RA Burckstummer T., Bennett K.L., Superti-Furga G., Colinge J.; RT "Initial characterization of the human central proteome."; RL BMC Syst. Biol. 5:17-17(2011). RN [3] {ECO:0000313|Ensembl:ENSP00000375808} RP IDENTIFICATION. RG Ensembl; RL Submitted (JUL-2011) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an Ensembl CC automatic analysis pipeline and should be considered as CC preliminary data. {ECO:0000313|Ensembl:ENSP00000375808}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; L47234; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR ProteinModelPortal; E7EVE9; -. DR STRING; 9606.ENSP00000375809; -. DR EPD; E7EVE9; -. DR MaxQB; E7EVE9; -. DR PaxDb; E7EVE9; -. DR Ensembl; ENST00000391944; ENSP00000375808; ENSG00000104884. DR UCSC; uc010ejz.2; human. DR HGNC; HGNC:3434; ERCC2. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR GeneTree; ENSGT00550000075092; -. DR ChiTaRS; ERCC2; human. DR NextBio; 35500632; -. DR Proteomes; UP000005640; Chromosome 19. DR Bgee; E7EVE9; -. DR ExpressionAtlas; E7EVE9; baseline and differential. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 1. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 2. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 3. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 1: Evidence at protein level; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000005640}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Proteomics identification {ECO:0000213|EPD:E7EVE9, KW ECO:0000213|MaxQB:E7EVE9, ECO:0000213|PeptideAtlas:E7EVE9}; KW Reference proteome {ECO:0000313|Proteomes:UP000005640}. FT DOMAIN 7 205 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 77 100 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 682 AA; 77922 MW; C27E206381B1D371 CRC64; MKLNVDGLLV YFPYDYIYPE QFSYMRELKR TLDAKGHGVL EMPSGTGKTV SLLALIMAYQ RAYPLEVTKL IYCSRTVPEI EKVIEELRKL LNFYEKQEGE KLPFLGLALS SRKNLCIHPE ILHANVVVYS YHYLLDPKIA DLVSKELARK AVVVFDEAHN IDNVCIDSMS VNLTRRTLDR CQGNLETLQK TVLRIKETDE QRLRDEYRRL VEGLREASAA RETDAHLANP VLPDEVLQEA VPGSIRTAEH FLGFLRRLLE YVKWRLRVQH VVQESPPAFL SGLAQRVCIQ RKPLRFCAER LRSLLHTLEI TDLADFSPLT LLANFATLVS TYAKGFTIII EPFDDRTPTI ANPILHFSCM DASLAIKPVF ERFQSVIITS GTLSPLDIYP KILDFHPVTM ATFTMTLARV CLCPMIIGRG NDQVAISSKF ETREDIAVIR NYGNLLLEMS AVVPDGIVAF FTSYQYMEST VASWYEQGIL ENIQRNKLLF IETQDGAETS VALEKYQEAC ENGRGAILLS VARGKVSEGI DFVHHYGRAV IMFGVPYVYT QSRILKARLE YLRDQFQIRE NDFLTFDAMR HAAQCVGRAI RGKTDYGLMV FADKRFARGD KRGKLPRWIQ EHLTDANLNL TVDEGVQVAK YFLRQMAQPF HREDQLGLSL LSLEQLESEE TLKRIEQIAQ QL // ID E7Q378_YEASB Unreviewed; 778 AA. AC E7Q378; DT 05-APR-2011, integrated into UniProtKB/TrEMBL. DT 05-APR-2011, sequence version 1. DT 11-MAY-2016, entry version 27. DE SubName: Full=Rad3p {ECO:0000313|EMBL:EGA59060.1}; GN ORFNames=FOSTERSB_1420 {ECO:0000313|EMBL:EGA59060.1}; OS Saccharomyces cerevisiae (strain FostersB) (Baker's yeast). OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; OC Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces. OX NCBI_TaxID=764102 {ECO:0000313|EMBL:EGA59060.1, ECO:0000313|Proteomes:UP000000309}; RN [1] {ECO:0000313|EMBL:EGA59060.1, ECO:0000313|Proteomes:UP000000309} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=FostersB {ECO:0000313|EMBL:EGA59060.1, RC ECO:0000313|Proteomes:UP000000309}; RX PubMed=21304888; DOI=10.1371/journal.pgen.1001287; RA Borneman A.R., Desany B.A., Riches D., Affourtit J.P., Forgan A.H., RA Pretorius I.S., Egholm M., Chambers P.J.; RT "Whole-genome comparison reveals novel genetic elements that RT characterize the genome of industrial strains of Saccharomyces RT cerevisiae."; RL PLoS Genet. 7:E1001287-E1001287(2011). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:EGA59060.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AEHH01000016; EGA59060.1; -; Genomic_DNA. DR ProteinModelPortal; E7Q378; -. DR SMR; E7Q378; 455-686. DR EnsemblFungi; EGA59060; EGA59060; FOSTERSB_1420. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000000309; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000000309}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000000309}. FT DOMAIN 7 285 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 778 AA; 89786 MW; 978BCA01751949B4 CRC64; MKFYIDDLPV LFPYPKIYPE QYNYMCDIKK TLDVGGNSIL EMPSGTGKTV SLLSLTIAYQ MHYPEHRKII YCSRTMSEIE KALVELENLM DYRTKELGYQ EDFRGLGLTS RKNLCLHPEV SKERKGTVVD EKCRRMTNGQ AKRKLEEDPE ANVELCEYHE NLYNIEVEDY LPKGVFSFEK LLKYCEEKTL CPYFIVRRMI SLCNIIIYSY HYLLDPKIAE RVSNEVSKDS IVIFDEAHNI DNVCIESLSL DLTTDALRRA TRGANALDER ISEVRKVDSQ KLQDEYEKLV QGLHSADILT DQEEPFVETP VLPQDLLTEA IPGNIRRAEH FVSFLKRLIE YLKTRMKVLH VISETPKSFL QHLKQLTFIE RKPLRFCSER LSLLVRTLEV TEVEDFTALK DIATFATLIS TYEEGFLLII EPYEIENAAV PNPIMRFTCL DASIAIKPVF ERFSSVIITS GTISPLDMYP RMLNFKTVLQ KSYAMTLAKK SFLPMIITKG SDQVAISSRF EIRNDPSIVR NYGSMLVEFA KITPDGMVVF FPSYLYMESI VSMWQTMGIL DEVWKHKLIL VETPDAQETS LALETYRKAC SNGRGAILLS VARGKVSEGI DFDHQYGRTV LMIGIPFQYT ESRILKARLE FMRENYRIRE NDFLSFDAMR HAAQCLGRVL RGKDDYGVMV LADRRFSRKR SQLPKWIAQG LSDADLNLST DMAISNTKQF LRTMAQPTDP KDQEGVSVWS YEDLIKHQNS RKDQGGFIEN ENKEGEQDED EDEDIEMQ // ID E7QE49_YEASZ Unreviewed; 778 AA. AC E7QE49; DT 05-APR-2011, integrated into UniProtKB/TrEMBL. DT 05-APR-2011, sequence version 1. DT 11-MAY-2016, entry version 27. DE SubName: Full=Rad3p {ECO:0000313|EMBL:EGA87173.1}; GN ORFNames=VL3_1436 {ECO:0000313|EMBL:EGA87173.1}; OS Saccharomyces cerevisiae (strain Zymaflore VL3) (Baker's yeast). OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; OC Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces. OX NCBI_TaxID=764100 {ECO:0000313|EMBL:EGA87173.1, ECO:0000313|Proteomes:UP000007238}; RN [1] {ECO:0000313|EMBL:EGA87173.1, ECO:0000313|Proteomes:UP000007238} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Zymaflore VL3 {ECO:0000313|Proteomes:UP000007238}; RX PubMed=21304888; DOI=10.1371/journal.pgen.1001287; RA Borneman A.R., Desany B.A., Riches D., Affourtit J.P., Forgan A.H., RA Pretorius I.S., Egholm M., Chambers P.J.; RT "Whole-genome comparison reveals novel genetic elements that RT characterize the genome of industrial strains of Saccharomyces RT cerevisiae."; RL PLoS Genet. 7:E1001287-E1001287(2011). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:EGA87173.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AEJS01000026; EGA87173.1; -; Genomic_DNA. DR ProteinModelPortal; E7QE49; -. DR SMR; E7QE49; 455-686. DR EnsemblFungi; EGA87173; EGA87173; VL3_1436. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000007238; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000007238}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000007238}. FT DOMAIN 7 285 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 778 AA; 89786 MW; 978BCA01751949B4 CRC64; MKFYIDDLPV LFPYPKIYPE QYNYMCDIKK TLDVGGNSIL EMPSGTGKTV SLLSLTIAYQ MHYPEHRKII YCSRTMSEIE KALVELENLM DYRTKELGYQ EDFRGLGLTS RKNLCLHPEV SKERKGTVVD EKCRRMTNGQ AKRKLEEDPE ANVELCEYHE NLYNIEVEDY LPKGVFSFEK LLKYCEEKTL CPYFIVRRMI SLCNIIIYSY HYLLDPKIAE RVSNEVSKDS IVIFDEAHNI DNVCIESLSL DLTTDALRRA TRGANALDER ISEVRKVDSQ KLQDEYEKLV QGLHSADILT DQEEPFVETP VLPQDLLTEA IPGNIRRAEH FVSFLKRLIE YLKTRMKVLH VISETPKSFL QHLKQLTFIE RKPLRFCSER LSLLVRTLEV TEVEDFTALK DIATFATLIS TYEEGFLLII EPYEIENAAV PNPIMRFTCL DASIAIKPVF ERFSSVIITS GTISPLDMYP RMLNFKTVLQ KSYAMTLAKK SFLPMIITKG SDQVAISSRF EIRNDPSIVR NYGSMLVEFA KITPDGMVVF FPSYLYMESI VSMWQTMGIL DEVWKHKLIL VETPDAQETS LALETYRKAC SNGRGAILLS VARGKVSEGI DFDHQYGRTV LMIGIPFQYT ESRILKARLE FMRENYRIRE NDFLSFDAMR HAAQCLGRVL RGKDDYGVMV LADRRFSRKR SQLPKWIAQG LSDADLNLST DMAISNTKQF LRTMAQPTDP KDQEGVSVWS YEDLIKHQNS RKDQGGFIEN ENKEGEQDED EDEDIEMQ // ID E9CXR0_COCPS Unreviewed; 795 AA. AC E9CXR0; DT 05-APR-2011, integrated into UniProtKB/TrEMBL. DT 05-APR-2011, sequence version 1. DT 11-MAY-2016, entry version 22. DE SubName: Full=DNA repair helicase RAD3 {ECO:0000313|EMBL:EFW20737.1}; GN ORFNames=CPSG_02580 {ECO:0000313|EMBL:EFW20737.1}; OS Coccidioides posadasii (strain RMSCC 757 / Silveira) (Valley fever OS fungus). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; OC Eurotiomycetidae; Onygenales; Onygenales incertae sedis; Coccidioides. OX NCBI_TaxID=443226 {ECO:0000313|Proteomes:UP000002497}; RN [1] {ECO:0000313|Proteomes:UP000002497} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=RMSCC 757 / Silveira {ECO:0000313|Proteomes:UP000002497}; RG The Broad Institute Genome Sequencing Center for Infectious Disease; RA Neafsey D., Orbach M., Henn M.R., Cole G.T., Galgiani J., RA Gardner M.J., Kirkland T.N., Taylor J.W., Young S.K., Zeng Q., RA Koehrsen M., Alvarado L., Berlin A., Borenstein D., Chapman S.B., RA Chen Z., Engels R., Freedman E., Gellesch M., Goldberg J., Griggs A., RA Gujja S., Heilman E., Heiman D., Howarth C., Jen D., Larson L., RA Mehta T., Neiman D., Park D., Pearson M., Richards J., Roberts A., RA Saif S., Shea T., Shenoy N., Sisk P., Stolte C., Sykes S., Walk T., RA White J., Yandava C., Haas B., Nusbaum C., Birren B.; RT "The genome sequence of Coccidioides posadasii strain Silveira."; RL Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GL636488; EFW20737.1; -; Genomic_DNA. DR EnsemblFungi; EFW20737; EFW20737; CPSG_02580. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000002497; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EFW20737.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000002497}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EFW20737.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EFW20737.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EFW20737.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000002497}. FT DOMAIN 7 287 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 277 300 {ECO:0000256|SAM:Coils}. FT COILED 738 762 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 795 AA; 90861 MW; 2E97BD15E581AD50 CRC64; MKFFIDDLPV LFPYPRIYPE QYAYICDLKK TLDVGGHCVL EMPSGTGKTV SLLSLIIAYQ QHYPSHRKLI YCSRTMSEIE KALTELRELM KYREQQLGYT EDFRALGLTS RKNLCLHPSV RREKSGTVVD ARCRSLTASF VKERKEKGED VELCLYHENL DLLEPSNLVP PGVFTLDGLI RYGEQHKQCP YFSARRMMPF CNVIIYSYHY LLDPKIAERV SKELSKDCIV VFDEAHNIDN VCIESLSIDI TEDSLRKAGR GANNLGHKID EMKRSDAAKL QKEYEKLVEG LREADQAREE DQLMANPALP DDLLKEAVPG NIRRAEHFVA FLKRFIEYLK TRMKVLHAIS ETPLSFLSHL KDLTYIERKP LRFCAERLTS LVRTLELMNI EEYRPLQEIA TFATLVSTYE KGFLLILEPF ESDTATVPNP VLHFTCLDAA IAIKPVFERF GSVIITSGTL SPLEMYPKML GFQTVLQESY SMTLARRSFL PMIVTRGSDQ AQISSAFKIR NDPGVVRNYG NLLLEFSRIT PDGIVVFFPS YLYMESIISM WQGMGILDSI WNYKLILVET PDSQESSLAL ETYRTACCNG RGAILLCVAR GKVSEGIDFD HHYGRAVLCI GVPFQYTESP ILKARLRFML ENYRIREDDF LSFDAMRHAA QCLGRVLRGK DDYGIMVLAD RRFQKKRNQL PKWISQNILE SETNLSTDMA VATAKSFLRT MAQPFKAKDQ EGISTWSLAD LERHLEKQKG EAEKKYQEAN QRHAALPAAN GANNNGDLEM YDDGIDEDLM MLDAE // ID E9EGX9_METAQ Unreviewed; 716 AA. AC E9EGX9; DT 05-APR-2011, integrated into UniProtKB/TrEMBL. DT 05-APR-2011, sequence version 1. DT 11-MAY-2016, entry version 26. DE SubName: Full=DNA repair helicase RAD3 {ECO:0000313|EMBL:EFY84841.1}; GN ORFNames=MAC_09127 {ECO:0000313|EMBL:EFY84841.1}; OS Metarhizium acridum (strain CQMa 102). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; OC Sordariomycetes; Hypocreomycetidae; Hypocreales; Clavicipitaceae; OC Metarhizium. OX NCBI_TaxID=655827 {ECO:0000313|Proteomes:UP000002499}; RN [1] {ECO:0000313|EMBL:EFY84841.1, ECO:0000313|Proteomes:UP000002499} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=CQMa 102 {ECO:0000313|EMBL:EFY84841.1, RC ECO:0000313|Proteomes:UP000002499}; RX PubMed=21253567; DOI=10.1371/journal.pgen.1001264; RA Gao Q., Jin K., Ying S.H., Zhang Y., Xiao G., Shang Y., Duan Z., RA Hu X., Xie X.Q., Zhou G., Peng G., Luo Z., Huang W., Wang B., Fang W., RA Wang S., Zhong Y., Ma L.J., St Leger R.J., Zhao G.P., Pei Y., RA Feng M.G., Xia Y., Wang C.; RT "Genome sequencing and comparative transcriptomics of the model RT entomopathogenic fungi Metarhizium anisopliae and M. acridum."; RL PLoS Genet. 7:E1001264-E1001264(2011). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GL698603; EFY84841.1; -; Genomic_DNA. DR RefSeq; XP_007815467.1; XM_007817276.1. DR EnsemblFungi; EFY84841; EFY84841; MAC_09127. DR GeneID; 19253438; -. DR KEGG; maw:MAC_09127; -. DR InParanoid; E9EGX9; -. DR KO; K10844; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000002499; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EFY84841.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000002499}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EFY84841.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EFY84841.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EFY84841.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000002499}. FT DOMAIN 1 209 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 202 225 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 716 AA; 82532 MW; 2A5FEB8563B69975 CRC64; MSEIEKALVE LKALMKYRTE QLGFEEDFRG LGLTSRKNLC LHPSVKREKS GSVVDARCRS LTAGFVKEKK DRGENVDVCI YHDNLDLLEP HNLIPNGVWT FDGILRHGEE HKQCPYFTAR RMMQYCNVVI FSYHYLLDPK IAERVSRDFS KDCIVVFDEA HNIDNVCIEA LSTDITEDSL RRASRGAQNL EHKITEMRDT DQEQLQNEYQ KLVQGLREAD EARQEDAFMA NPTLPEDLLR EAVPGNIRRA EHFVAFLKRF IEYLKTRMKV RQVISETPPS FLAHLKEHTF IEKKPLRFCA ERLTSLVRTL ELTNVEDYQP LQEVATFATL VATYEKGFLL IFEPFESDTA EVPNPILHFT CLDAAIAIRP VFERFYSVII TSGTISPLEM YPKMLDFSTV IQESYSMTLA RRSFLPMIVT RGSDQASIST SFQVRNEPSV VRNYGTLLIE FAKITPDGLV VFFPSYLYME SIISMWQGMG ILDEVWKYKL ILVETPDAQE TSLALETYRT ACCNGRGAIL LCVARGKVSE GIDFDHQYGR TVLCIGVPFQ YTESRILKAR LEFLRETYRI KENDFLSFDA MRHAAQCLGR VLRGKDDYGI MVLADRRFQK KRAQLPKWIN QGLLDVDTNL STDMAVSSAR RFLRTMAQPF HAKDQDGIST WGYEDLQKYK EKVDMEKIRE LEDAAKNLGD EDTAPSNPYE FDDEELDQEM MKLDDF // ID E9EZ49_METRA Unreviewed; 716 AA. AC E9EZ49; DT 05-APR-2011, integrated into UniProtKB/TrEMBL. DT 05-APR-2011, sequence version 1. DT 11-MAY-2016, entry version 29. DE SubName: Full=DNA excision repair helicase {ECO:0000313|EMBL:EFY99240.1}; GN ORFNames=MAA_05298 {ECO:0000313|EMBL:EFY99240.1}; OS Metarhizium robertsii (strain ARSEF 23 / ATCC MYA-3075) (Metarhizium OS anisopliae (strain ARSEF 23)). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; OC Sordariomycetes; Hypocreomycetidae; Hypocreales; Clavicipitaceae; OC Metarhizium. OX NCBI_TaxID=655844 {ECO:0000313|EMBL:EFY99240.1, ECO:0000313|Proteomes:UP000002498}; RN [1] {ECO:0000313|EMBL:EFY99240.1, ECO:0000313|Proteomes:UP000002498} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ARSEF 23 / ATCC MYA-3075 {ECO:0000313|Proteomes:UP000002498}; RX PubMed=21253567; DOI=10.1371/journal.pgen.1001264; RA Gao Q., Jin K., Ying S.H., Zhang Y., Xiao G., Shang Y., Duan Z., RA Hu X., Xie X.Q., Zhou G., Peng G., Luo Z., Huang W., Wang B., Fang W., RA Wang S., Zhong Y., Ma L.J., St Leger R.J., Zhao G.P., Pei Y., RA Feng M.G., Xia Y., Wang C.; RT "Genome sequencing and comparative transcriptomics of the model RT entomopathogenic fungi Metarhizium anisopliae and M. acridum."; RL PLoS Genet. 7:E1001264-E1001264(2011). RN [2] {ECO:0000313|EMBL:EFY99240.1, ECO:0000313|Proteomes:UP000002498} RP GENOME REANNOTATION. RC STRAIN=ARSEF 23 / ATCC MYA-3075 {ECO:0000313|Proteomes:UP000002498}; RX PubMed=25368161; DOI=10.1073/pnas.1412662111; RA Hu X., Xiao G., Zheng P., Shang Y., Su Y., Zhang X., Liu X., Zhan S., RA St Leger R.J., Wang C.; RT "Trajectory and genomic determinants of fungal-pathogen speciation and RT host adaptation."; RL Proc. Natl. Acad. Sci. U.S.A. 111:16796-16801(2014). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:EFY99240.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ADNJ02000002; EFY99240.1; -; Genomic_DNA. DR RefSeq; XP_007821487.1; XM_007823296.1. DR EnsemblFungi; EFY99240; EFY99240; MAA_05298. DR GeneID; 19259584; -. DR KEGG; maj:MAA_05298; -. DR KO; K10844; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000002498; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EFY99240.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000002498}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EFY99240.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EFY99240.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EFY99240.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000002498}. FT DOMAIN 1 209 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 202 225 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 716 AA; 82503 MW; 46CF57134A978AEA CRC64; MSEIEKALVE LKALMKYRTE QLGYEEDFRG LGLTSRKNLC LHPSVKREKS GSVVDARCRS LTAGFVKEKK DRGENVAVCV YHDNLDLLEP HNLIPNGVWT FDGILRYGEE HKQCPYFTAR RMMQYCNVVI FSYHYLLDPK IAERVSRDFS KDCIVVFDEA HNIDNVCIEA LSTDITEDSL RRASRGAQNL EHKITEMRDT DQEQLQNEYQ KLVQGLREAD EARQEDAFMA NPALPEDLLR EAVPGNIRRA EHFVAFLKRF IEYLKTRMKV RQVISETPPS FLAHLKEHTF IEKKPLRFCA ERLTSLVRTL ELTNIEDYQP LQEVATFATL VATYEKGFLL ILEPFESDTA EVPNPILHFT CLDAAIAIRP VFERFYSVII TSGTISPLEM YPKMLDFSTV IQESYSMTLA RRSFLPMIVT RGSDQASIST SFQVRNEPSV VRNYGTLLIE FAKITPDGLV VFFPSYLYME SIISMWQGMG ILDEVWKYKL ILVETPDAQE TSLALETYRT ACCNGRGAIL LCVARGKVSE GIDFDHQYGR TVLCIGVPFQ YTESRILKAR LEFLRETYRI KENDFLSFDA MRHAAQCLGR VLRGKDDYGI MVLADRRFQK KRVQLPKWIN QGLLDVDTNL STDMAVSSAR RFLRTMAQPF HAKDQDGIST WGYEDLQKYK EKVDMEKIRE LEDAAKIPGD EDNAPINPYE FDDEELDQDM MELDDF // ID E9H1D4_DAPPU Unreviewed; 760 AA. AC E9H1D4; DT 05-APR-2011, integrated into UniProtKB/TrEMBL. DT 05-APR-2011, sequence version 1. DT 11-MAY-2016, entry version 31. DE SubName: Full=Putative uncharacterized protein {ECO:0000313|EMBL:EFX74423.1}; GN ORFNames=DAPPUDRAFT_324413 {ECO:0000313|EMBL:EFX74423.1}; OS Daphnia pulex (Water flea). OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Branchiopoda; OC Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia. OX NCBI_TaxID=6669 {ECO:0000313|Proteomes:UP000000305}; RN [1] {ECO:0000313|EMBL:EFX74423.1, ECO:0000313|Proteomes:UP000000305} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RX PubMed=21292972; DOI=10.1126/science.1197761; RA Colbourne J.K., Pfrender M.E., Gilbert D., Thomas W.K., Tucker A., RA Oakley T.H., Tokishita S., Aerts A., Arnold G.J., Basu M.K., RA Bauer D.J., Caceres C.E., Carmel L., Casola C., Choi J.H., RA Detter J.C., Dong Q., Dusheyko S., Eads B.D., Frohlich T., RA Geiler-Samerotte K.A., Gerlach D., Hatcher P., Jogdeo S., RA Krijgsveld J., Kriventseva E.V., Kultz D., Laforsch C., Lindquist E., RA Lopez J., Manak J.R., Muller J., Pangilinan J., Patwardhan R.P., RA Pitluck S., Pritham E.J., Rechtsteiner A., Rho M., Rogozin I.B., RA Sakarya O., Salamov A., Schaack S., Shapiro H., Shiga Y., RA Skalitzky C., Smith Z., Souvorov A., Sung W., Tang Z., Tsuchiya D., RA Tu H., Vos H., Wang M., Wolf Y.I., Yamagata H., Yamada T., Ye Y., RA Shaw J.R., Andrews J., Crease T.J., Tang H., Lucas S.M., RA Robertson H.M., Bork P., Koonin E.V., Zdobnov E.M., Grigoriev I.V., RA Lynch M., Boore J.L.; RT "The ecoresponsive genome of Daphnia pulex."; RL Science 331:555-561(2011). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GL732583; EFX74423.1; -; Genomic_DNA. DR STRING; 6669.DappuP324413; -. DR EnsemblMetazoa; EFX74423; EFX74423; DAPPUDRAFT_324413. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; E9H1D4; -. DR OMA; DEVWKYK; -. DR Proteomes; UP000000305; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000000305}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000000305}. FT DOMAIN 7 290 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 760 AA; 86660 MW; E8CB68859BB99977 CRC64; MKLNVDGLLV YFPYDYIYPE QFSYMLELKH ALDAKGHCLL EMPSGTGKTT TLLSLIVAYM KAHPLDLTKL VYCSRTVPEI EKVMEELRKL MNYYEKEMGM EQNILGLALS SRKNLCIHPS VSKEREGKVV DGRCYGLTAS FVRARHAGDD AVPVCNFYEG FDAHGKEFPL PPGVYNLDDL KEYGQAKGWC PYFLARYTIT HANIVVYSYH YLLDPKIAEV VSKEISKTSV VVFDEAHNID NVCIDSMSVK ITKRLLDKCS NSIQILETTI SNMKENDNRR LEKEYQRLVE GLRDANIARE TDMALVNPVL PSEILEEAVP GTIRTAEHFV AFLKRVVEYI KTRLRVQHVV QESPAGFLRD IHIKVCIDRK PLRFTAERLS SLIRTLEISD LTDFSPLVTV SHFATLVSTY TKGFTIIIEP FEDRAPTVSN PILYFSCLDS SIAIKPVFNR FQTVVITSGT LSPLDMYPKI LDFHPVIMTS FTMTLARPCI LPMIVSKGND QVAMSSRYET REDTAVIRNY GNLLVEVAAA VPDGIVCFFT SYLYLETIVS SWYDQGIIDQ LQRHKLLFIE TQDAAETSLA LINYIKACDN GRGAVLLSVA RGKVSEGIDF DHHLGRAVLM FGIPYVYTQS RILRARLEYL RDQFQIREND FLTFDAMRHA AQCLGRCMRG KTDYGIMILA DKRFSRADKR SKLPKWIQEH LKDTNCNLST EECVQISKRW LRQMAQPFSR EDQLGISLLT LEQLQSEEMQ KKIQQRAQAA // ID E9Q6K1_MOUSE Unreviewed; 739 AA. AC E9Q6K1; DT 05-APR-2011, integrated into UniProtKB/TrEMBL. DT 05-APR-2011, sequence version 1. DT 11-MAY-2016, entry version 39. DE SubName: Full=TFIIH basal transcription factor complex helicase XPD subunit {ECO:0000313|Ensembl:ENSMUSP00000104100}; GN Name=Ercc2 {ECO:0000313|Ensembl:ENSMUSP00000104100, GN ECO:0000313|MGI:MGI:95413}; OS Mus musculus (Mouse). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; OC Muroidea; Muridae; Murinae; Mus; Mus. OX NCBI_TaxID=10090 {ECO:0000313|Ensembl:ENSMUSP00000104100, ECO:0000313|Proteomes:UP000000589}; RN [1] {ECO:0000313|Ensembl:ENSMUSP00000104100, ECO:0000313|Proteomes:UP000000589} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=C57BL/6J {ECO:0000313|Ensembl:ENSMUSP00000104100, RC ECO:0000313|Proteomes:UP000000589}; RX PubMed=19468303; DOI=10.1371/journal.pbio.1000112; RA Church D.M., Goodstadt L., Hillier L.W., Zody M.C., Goldstein S., RA She X., Bult C.J., Agarwala R., Cherry J.L., DiCuccio M., Hlavina W., RA Kapustin Y., Meric P., Maglott D., Birtle Z., Marques A.C., Graves T., RA Zhou S., Teague B., Potamousis K., Churas C., Place M., Herschleb J., RA Runnheim R., Forrest D., Amos-Landgraf J., Schwartz D.C., Cheng Z., RA Lindblad-Toh K., Eichler E.E., Ponting C.P.; RT "Lineage-specific biology revealed by a finished genome assembly of RT the mouse."; RL PLoS Biol. 7:E1000112-E1000112(2009). RN [2] {ECO:0000213|PubMed:21183079} RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. RX PubMed=21183079; DOI=10.1016/j.cell.2010.12.001; RA Huttlin E.L., Jedrychowski M.P., Elias J.E., Goswami T., Rad R., RA Beausoleil S.A., Villen J., Haas W., Sowa M.E., Gygi S.P.; RT "A tissue-specific atlas of mouse protein phosphorylation and RT expression."; RL Cell 143:1174-1189(2010). RN [3] {ECO:0000313|Ensembl:ENSMUSP00000104100} RP IDENTIFICATION. RC STRAIN=C57BL/6J {ECO:0000313|Ensembl:ENSMUSP00000104100}; RG Ensembl; RL Submitted (MAY-2011) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an Ensembl CC automatic analysis pipeline and should be considered as CC preliminary data. {ECO:0000313|Ensembl:ENSMUSP00000104100}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AC118017; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR ProteinModelPortal; E9Q6K1; -. DR SMR; E9Q6K1; 26-237. DR STRING; 10090.ENSMUSP00000054380; -. DR MaxQB; E9Q6K1; -. DR PaxDb; E9Q6K1; -. DR Ensembl; ENSMUST00000108460; ENSMUSP00000104100; ENSMUSG00000030400. DR UCSC; uc009flr.1; mouse. DR MGI; MGI:95413; Ercc2. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR GeneTree; ENSGT00550000075092; -. DR NextBio; 35555373; -. DR Proteomes; UP000000589; Chromosome 7. DR Bgee; E9Q6K1; -. DR ExpressionAtlas; E9Q6K1; baseline and differential. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 1: Evidence at protein level; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000000589}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Proteomics identification {ECO:0000213|MaxQB:E9Q6K1, KW ECO:0000213|PeptideAtlas:E9Q6K1}; KW Reference proteome {ECO:0000313|Proteomes:UP000000589}. FT DOMAIN 7 262 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 739 AA; 84407 MW; F009EF8982E47641 CRC64; MKLNVDGLLV YFPYDYIYPE QFSYMLELKR TLDAKGHGVL EMPSGTGKTV SLLALIVAYQ RVIEELRKLL SFYEQQEGEK LPFLGLALSS RKNLCIHPEV TPLRFGKDVD GKCHSLTASY VRAQYQQDAS LPHCRFYEEF DIHGRQMPLP AGIYNLDDLK ALGQRQGWCP YFLARYSILH ANVVVYSYHY LLDPKIADLV SKELARKAVV VFDEAHNIDN VCIDSMSVNL TRRTLDRCQS NLDTLQKTVL RIKETDEQRL RDEYRRLVEG LREASVARET DAHLANPVLP DEVLQEAVPG SIRTAEHFLG FLRRLLEYVK WRLRVQHVVQ ESPPAFLSGL AQRVCIQRKP LRFCAERLRS LLHTLEIADL ADFSPLTLLA NFATLVSTYA KGFTIIIEPF DDRTPTIANP VLHFSCMDAS LAIKPVFERF QSVIITSGTL SPLDIYPKIL DFHPVTMATF TMTLARVCLC PMIIGRGNDQ VAISSKFETR EDIAVIRNYG NLLLEMSAVV PDGIVAFFTS YQYMESTVAS WYEQGILENI QRNKLLFIET QDGAETSVAL EKYQEACENG RGAILLSVAR GKVSEGIDFV HHYGRAVIMF GVPYVYTQSR ILKARLEYLR DQFQIRENDF LTFDAMRHAA QCVGRAIRGK TDYGLMVFAD KRFARADKRG KLPRWIQEHL TDSNLNLTVD EGVQVAKYFL RQMAQPFHRE DQLGLSLLSL EQLQSEETLQ RIEQIAQQL // ID ERCC2_ARATH Reviewed; 758 AA. AC Q8W4M7; Q9SE44; Q9ZVS1; DT 04-JAN-2005, integrated into UniProtKB/Swiss-Prot. DT 01-MAR-2002, sequence version 1. DT 13-APR-2016, entry version 108. DE RecName: Full=DNA repair helicase XPD; DE EC=3.6.4.12; DE AltName: Full=ERCC2 homolog; DE AltName: Full=RAD3 homolog; DE AltName: Full=UV hypersensitive protein 6; DE Short=AtUVH6; DE AltName: Full=XPD homolog; DE Short=AtXPD {ECO:0000303|PubMed:15645454}; GN Name=XPD {ECO:0000303|PubMed:16623910}; Synonyms=UVH6; GN OrderedLocusNames=At1g03190; ORFNames=F15K9.20; OS Arabidopsis thaliana (Mouse-ear cress). OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; OC Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; OC Arabidopsis. OX NCBI_TaxID=3702; RN [1] RP NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, TISSUE SPECIFICITY, AND RP MUTAGENESIS OF GLY-521. RC STRAIN=cv. Columbia; RX PubMed=12857822; DOI=10.1104/pp.103.021808; RA Liu Z., Hong S.-W., Escobar M., Vierling E., Mitchell D.L., RA Mount D.W., Hall J.D.; RT "Arabidopsis UVH6, a homolog of human XPD and yeast RAD3 DNA repair RT genes, functions in DNA repair and is essential for plant growth."; RL Plant Physiol. 132:1405-1414(2003). RN [2] RP NUCLEOTIDE SEQUENCE [MRNA]. RA Vonarx E.J., Kunz B.A.; RT "A Rad3/XP-D/ERCC2 homolog from Arabidopsis thaliana."; RL Submitted (SEP-1999) to the EMBL/GenBank/DDBJ databases. RN [3] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=cv. Columbia; RX PubMed=11130712; DOI=10.1038/35048500; RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., RA White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., RA Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., RA Chung M.K., Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., RA Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., RA Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., RA Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., RA Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., RA Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., RA Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., RA Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., RA Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., RA Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., RA Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., RA Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.; RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis RT thaliana."; RL Nature 408:816-820(2000). RN [4] RP GENOME REANNOTATION. RC STRAIN=cv. Columbia; RG The Arabidopsis Information Resource (TAIR); RL Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases. RN [5] RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. RC STRAIN=cv. Columbia; RX PubMed=14593172; DOI=10.1126/science.1088305; RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., RA Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., RA Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G., RA Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., RA Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., RA Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., RA Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., RA Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., RA Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., RA Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., RA Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., RA Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.; RT "Empirical analysis of transcriptional activity in the Arabidopsis RT genome."; RL Science 302:842-846(2003). RN [6] RP MUTANT UVH6-1. RX PubMed=7498749; RA Jenkins M.E., Harlow G.R., Liu Z., Shotwell M.A., Ma J., Mount D.W.; RT "Radiation-sensitive mutants of Arabidopsis thaliana."; RL Genetics 140:725-732(1995). RN [7] RP FUNCTION. RX PubMed=9414549; DOI=10.1104/pp.115.4.1351; RA Jenkins M.E., Suzuki T.C., Mount D.W.; RT "Evidence that heat and ultraviolet radiation activate a common RT stress-response program in plants that is altered in the uvh6 mutant RT of Arabidopsis thaliana."; RL Plant Physiol. 115:1351-1358(1997). RN [8] RP COMPONENT OF TFIIH CORE COMPLEX, AND NOMENCLATURE. RX PubMed=15645454; DOI=10.1002/em.20094; RA Kunz B.A., Anderson H.J., Osmond M.J., Vonarx E.J.; RT "Components of nucleotide excision repair and DNA damage tolerance in RT Arabidopsis thaliana."; RL Environ. Mol. Mutagen. 45:115-127(2005). RN [9] RP INTERACTION WITH GTF2H2. RX PubMed=16623910; DOI=10.1111/j.1365-313X.2006.02705.x; RA Vonarx E.J., Tabone E.K., Osmond M.J., Anderson H.J., Kunz B.A.; RT "Arabidopsis homologue of human transcription factor IIH/nucleotide RT excision repair factor p44 can function in transcription and DNA RT repair and interacts with AtXPD."; RL Plant J. 46:512-521(2006). RN [10] RP GENE FAMILY. RX PubMed=24265739; DOI=10.1371/journal.pone.0078982; RA Xu R., Zhang S., Huang J., Zheng C.; RT "Genome-wide comparative in silico analysis of the RNA helicase gene RT family in Zea mays and Glycine max: a comparison with Arabidopsis and RT Oryza sativa."; RL PLoS ONE 8:E78982-E78982(2013). CC -!- FUNCTION: Putative ATP-dependent 5'-3' DNA helicase involved in CC nucleotide excision repair (NER) of UV-damaged DNA. May open DNA CC around the damage. Essential during plant growth. May negatively CC regulate a common response program mediated by UV damage and heat CC stress, that leads to tissue death and reduced chloroplast CC function. {ECO:0000269|PubMed:12857822, CC ECO:0000269|PubMed:9414549}. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC -!- COFACTOR: CC Name=[4Fe-4S] cluster; Xref=ChEBI:CHEBI:49883; CC Evidence={ECO:0000250}; CC Note=Binds 1 [4Fe-4S] cluster. {ECO:0000250}; CC -!- SUBUNIT: Component of the TFIIH core complex, which is composed of CC 7 subunits, XPD, XPB, TFB1/GTF2H1, GTF2H2/P44, TFB4/GTF2H3, CC TFB2/GTF2H4 and TFB5/GTF2H5 (Probable). Interacts with GTF2H2/P44 CC (PubMed:16623910). {ECO:0000269|PubMed:16623910, CC ECO:0000305|PubMed:15645454}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}. CC -!- TISSUE SPECIFICITY: Expressed at low levels in all tissues. CC {ECO:0000269|PubMed:12857822}. CC -!- SIMILARITY: Belongs to the helicase family. RAD3/XPD subfamily. CC {ECO:0000305}. CC -!- SIMILARITY: Contains 1 helicase ATP-binding domain. CC {ECO:0000255|PROSITE-ProRule:PRU00541}. CC -!- SEQUENCE CAUTION: CC Sequence=AAC72116.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305}; CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AY090788; AAM10793.1; -; mRNA. DR EMBL; AF188623; AAF14582.1; -; mRNA. DR EMBL; AC005278; AAC72116.1; ALT_SEQ; Genomic_DNA. DR EMBL; CP002684; AEE27542.1; -; Genomic_DNA. DR EMBL; CP002684; AEE27543.1; -; Genomic_DNA. DR EMBL; AY062471; AAL32549.1; -; mRNA. DR EMBL; AY090915; AAM13910.1; -; mRNA. DR EMBL; BT010344; AAQ56787.1; -; mRNA. DR PIR; C86163; C86163. DR RefSeq; NP_171818.1; NM_100201.2. DR RefSeq; NP_849584.1; NM_179253.1. DR UniGene; At.10863; -. DR ProteinModelPortal; Q8W4M7; -. DR BioGrid; 24792; 11. DR IntAct; Q8W4M7; 10. DR STRING; 3702.AT1G03190.1; -. DR iPTMnet; Q8W4M7; -. DR PaxDb; Q8W4M7; -. DR PRIDE; Q8W4M7; -. DR EnsemblPlants; AT1G03190.1; AT1G03190.1; AT1G03190. DR EnsemblPlants; AT1G03190.2; AT1G03190.2; AT1G03190. DR GeneID; 839557; -. DR Gramene; AT1G03190.1; AT1G03190.1; AT1G03190. DR Gramene; AT1G03190.2; AT1G03190.2; AT1G03190. DR KEGG; ath:AT1G03190; -. DR TAIR; AT1G03190; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR HOGENOM; HOG000205390; -. DR InParanoid; Q8W4M7; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR PhylomeDB; Q8W4M7; -. DR BioCyc; ARA:AT1G03190-MONOMER; -. DR BioCyc; ARA:GQT-122-MONOMER; -. DR Reactome; R-ATH-113418; Formation of the Early Elongation Complex. DR Reactome; R-ATH-5696395; Formation of Incision Complex in GG-NER. DR Reactome; R-ATH-5696400; Dual Incision in GG-NER. DR Reactome; R-ATH-674695; RNA Polymerase II Pre-transcription Events. DR Reactome; R-ATH-6781823; Formation of TC-NER Pre-Incision Complex. DR Reactome; R-ATH-6782135; Dual incision in TC-NER. DR Reactome; R-ATH-6782210; Gap-filling DNA repair synthesis and ligation in TC-NER. DR Reactome; R-ATH-72086; mRNA Capping. DR Reactome; R-ATH-73776; RNA Polymerase II Promoter Escape. DR Reactome; R-ATH-73779; RNA Polymerase II Transcription Pre-Initiation And Promoter Opening. DR Reactome; R-ATH-75953; RNA Polymerase II Transcription Initiation. DR Reactome; R-ATH-76042; RNA Polymerase II Transcription Initiation And Promoter Clearance. DR Reactome; R-ATH-77075; RNA Pol II CTD phosphorylation and interaction with CE. DR PRO; PR:Q8W4M7; -. DR Proteomes; UP000006548; Chromosome 1. DR Genevisible; Q8W4M7; AT. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW. DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. DR GO; GO:0006281; P:DNA repair; IMP:TAIR. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:UniProtKB-KW. DR GO; GO:0009408; P:response to heat; IMP:TAIR. DR GO; GO:0009411; P:response to UV; IMP:TAIR. DR GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-KW. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 1: Evidence at protein level; KW 4Fe-4S; ATP-binding; Complete proteome; DNA damage; DNA repair; KW DNA-binding; Helicase; Hydrolase; Iron; Iron-sulfur; Metal-binding; KW Nucleotide-binding; Nucleus; Reference proteome; Transcription; KW Transcription regulation. FT CHAIN 1 758 DNA repair helicase XPD. FT /FTId=PRO_0000101982. FT DOMAIN 7 285 Helicase ATP-binding. FT {ECO:0000255|PROSITE-ProRule:PRU00541}. FT NP_BIND 42 49 ATP. {ECO:0000255|PROSITE- FT ProRule:PRU00541}. FT MOTIF 234 238 DEAH box. FT METAL 116 116 Iron-sulfur (4Fe-4S). {ECO:0000250}. FT METAL 134 134 Iron-sulfur (4Fe-4S). {ECO:0000250}. FT METAL 155 155 Iron-sulfur (4Fe-4S). {ECO:0000250}. FT METAL 190 190 Iron-sulfur (4Fe-4S). {ECO:0000250}. FT MUTAGEN 521 521 G->E: In uvh6-1; confers increased FT sensitivity to UV light and heat, yellow- FT green leaf coloration, and mild growth FT defects. {ECO:0000269|PubMed:12857822}. FT CONFLICT 559 559 K -> E (in Ref. 2; AAF14582). FT {ECO:0000305}. SQ SEQUENCE 758 AA; 86236 MW; C5659DBE6219B1A6 CRC64; MIFKIEDVTV YFPYDNIYPE QYEYMVELKR ALDAKGHCLL EMPTGTGKTI ALLSLITSYR LSRPDSPIKL VYCTRTVHEM EKTLGELKLL HDYQVRHLGT QAKILALGLS SRKNLCVNTK VLAAENRDSV DAACRKRTAS WVRALSTENP NVELCDFFEN YEKAAENALL PPGVYTLEDL RAFGKNRGWC PYFLARHMIQ FANVIVYSYQ YLLDPKVAGF ISKELQKESV VVFDEAHNID NVCIEALSVS VRRVTLEGAN RNLNKIRQEI DRFKATDAGR LRAEYNRLVE GLALRGDLSG GDQWLANPAL PHDILKEAVP GNIRRAEHFV HVLRRLLQYL GVRLDTENVE KESPVSFVSS LNSQAGIEQK TLKFCYDRLQ SLMLTLEITD TDEFLPIQTV CDFATLVGTY ARGFSIIIEP YDERMPHIPD PILQLSCHDA SLAIKPVFDR FQSVVITSGT LSPIDLYPRL LNFTPVVSRS FKMSMTRDCI CPMVLTRGSD QLPVSTKFDM RSDPGVVRNY GKLLVEMVSI VPDGVVCFFV SYSYMDGIIA TWNETGILKE IMQQKLVFIE TQDVVETTLA LDNYRRACDC GRGAVFFSVA RGKVAEGIDF DRHYGRLVVM YGVPFQYTLS KILRARLEYL HDTFQIKEGD FLTFDALRQA AQCVGRVIRS KADYGMMIFA DKRYSRHDKR SKLPGWILSH LRDAHLNLST DMAIHIAREF LRKMAQPYDK AGTMGRKTLL TQEDLEKMAE TGVQDMAY // ID ERCC2_BOVIN Reviewed; 760 AA. AC A6QLJ0; DT 08-APR-2008, integrated into UniProtKB/Swiss-Prot. DT 21-AUG-2007, sequence version 1. DT 13-APR-2016, entry version 61. DE RecName: Full=TFIIH basal transcription factor complex helicase XPD subunit; DE EC=3.6.4.12; DE AltName: Full=CXPD; DE AltName: Full=DNA excision repair protein ERCC-2; DE AltName: Full=DNA repair protein complementing XP-D cells; DE AltName: Full=Xeroderma pigmentosum group D-complementing protein; GN Name=ERCC2; OS Bos taurus (Bovine). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; OC Pecora; Bovidae; Bovinae; Bos. OX NCBI_TaxID=9913; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. RC STRAIN=Hereford; TISSUE=Uterus; RG NIH - Mammalian Gene Collection (MGC) project; RL Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases. CC -!- FUNCTION: ATP-dependent 5'-3' DNA helicase, component of the core- CC TFIIH basal transcription factor. Involved in nucleotide excision CC repair (NER) of DNA by opening DNA around the damage, and in RNA CC transcription by RNA polymerase II by anchoring the CDK-activating CC kinase (CAK) complex, composed of CDK7, cyclin H and MAT1, to the CC core-TFIIH complex. Involved in the regulation of vitamin-D CC receptor activity. As part of the mitotic spindle-associated MMXD CC complex it plays a role in chromosome segregation. Might have a CC role in aging process and could play a causative role in the CC generation of skin cancers (By similarity). {ECO:0000250}. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC -!- COFACTOR: CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420; Evidence={ECO:0000250}; CC -!- COFACTOR: CC Name=[4Fe-4S] cluster; Xref=ChEBI:CHEBI:49883; CC Evidence={ECO:0000250}; CC Note=Binds 1 [4Fe-4S] cluster. {ECO:0000250}; CC -!- SUBUNIT: One of the six subunits forming the core-TFIIH basal CC transcription factor which associates with the CAK complex CC composed of CDK7, CCNH/cyclin H and MNAT1 to form the TFIIH basal CC transcription factor. The interaction with GTF2H2 results in the CC stimulation of the 5'-->3' helicase activity. Component of the CC MMXD complex, which includes CIAO1, ERCC2, FAM96B, MMS19 and CC SLC25A5. Interacts with FAM196B; the interaction is direct (By CC similarity). Interacts with ATF7IP (By similarity). {ECO:0000250}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}. Cytoplasm, CC cytoskeleton, spindle {ECO:0000250}. CC -!- PTM: ISGylated. {ECO:0000250}. CC -!- SIMILARITY: Belongs to the helicase family. RAD3/XPD subfamily. CC {ECO:0000305}. CC -!- SIMILARITY: Contains 1 helicase ATP-binding domain. CC {ECO:0000255|PROSITE-ProRule:PRU00541}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; BC147982; AAI47983.1; -; mRNA. DR RefSeq; NP_001096787.1; NM_001103317.1. DR UniGene; Bt.4215; -. DR STRING; 9913.ENSBTAP00000002680; -. DR PaxDb; A6QLJ0; -. DR PRIDE; A6QLJ0; -. DR GeneID; 100125238; -. DR KEGG; bta:100125238; -. DR CTD; 2068; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR HOVERGEN; HBG051498; -. DR InParanoid; A6QLJ0; -. DR KO; K10844; -. DR NextBio; 20788783; -. DR Proteomes; UP000009136; Unplaced. DR GO; GO:0005737; C:cytoplasm; ISS:UniProtKB. DR GO; GO:0005675; C:holo TFIIH complex; ISS:UniProtKB. DR GO; GO:0071817; C:MMXD complex; ISS:UniProtKB. DR GO; GO:0005634; C:nucleus; ISS:UniProtKB. DR GO; GO:0005819; C:spindle; ISS:UniProtKB. DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW. DR GO; GO:0043139; F:5'-3' DNA helicase activity; ISS:UniProtKB. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW. DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. DR GO; GO:0008022; F:protein C-terminus binding; ISS:UniProtKB. DR GO; GO:0007059; P:chromosome segregation; ISS:UniProtKB. DR GO; GO:0032508; P:DNA duplex unwinding; ISS:GOC. DR GO; GO:0035315; P:hair cell differentiation; ISS:UniProtKB. DR GO; GO:0033683; P:nucleotide-excision repair, DNA incision; ISS:UniProtKB. DR GO; GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB. DR GO; GO:0045893; P:positive regulation of transcription, DNA-templated; ISS:UniProtKB. DR GO; GO:0006468; P:protein phosphorylation; ISS:GOC. DR GO; GO:1901990; P:regulation of mitotic cell cycle phase transition; ISS:UniProtKB. DR GO; GO:0006979; P:response to oxidative stress; ISS:UniProtKB. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 2: Evidence at transcript level; KW 4Fe-4S; ATP-binding; Chromosome partition; Complete proteome; KW Cytoplasm; Cytoskeleton; DNA damage; DNA repair; DNA-binding; KW Helicase; Hydrolase; Iron; Iron-sulfur; Magnesium; Metal-binding; KW Nucleotide-binding; Nucleus; Reference proteome; Transcription; KW Transcription regulation; Ubl conjugation. FT CHAIN 1 760 TFIIH basal transcription factor complex FT helicase XPD subunit. FT /FTId=PRO_0000328564. FT DOMAIN 7 283 Helicase ATP-binding. FT {ECO:0000255|PROSITE-ProRule:PRU00541}. FT NP_BIND 42 49 ATP. {ECO:0000255|PROSITE- FT ProRule:PRU00541}. FT REGION 438 637 Mediates interaction with MMS19. FT {ECO:0000250}. FT MOTIF 234 237 DEAH box. FT MOTIF 682 695 Nuclear localization signal. FT {ECO:0000255}. FT METAL 116 116 Iron-sulfur (4Fe-4S). {ECO:0000250}. FT METAL 134 134 Iron-sulfur (4Fe-4S). {ECO:0000250}. FT METAL 155 155 Iron-sulfur (4Fe-4S). {ECO:0000250}. FT METAL 190 190 Iron-sulfur (4Fe-4S). {ECO:0000250}. SQ SEQUENCE 760 AA; 86999 MW; 645BE334EA415BC4 CRC64; MKLNVDGLLV YFPYDYIYPE QFSYMLELKR TLDAKGHGVL EMPSGTGKTV SLLALIMAYQ RAYPLEVTKL IYCSRTVPEI EKVIEELRKL LSFYEKQEGE KLPFLGLALS SRKNLCIHPE VTPLRFGKDV DGKCHSLTAS YVRAQYQRDS SLPHCRFYEE FDVHGRQVPL PTGIYNLDDL KAVGRRQGWC PYFLARYSIL HANVVVYSYH YLLDPKIADL VSKELARKAV VVFDEAHNID NVCIDSMSVN LTRRTLDRCQ ANLETLQKTV LRIKETDEQR LREEYRRLVE GLREASAARE TDAHLANPVL PDEVLKEAVP GSIRTAEHFL GFLRRLLEYV KWRLRVQHVV QESPPAFLSG LAQRVCIQRK PLRFCAERLR SLLYTLEISD LTDFSPLTLL ANFATLVSTY AKGFTIIIEP FDDRTPTIAN PILHFSCMDA SLAIKPVFER FQSVIITSGT LSPLDIYPKI LDFHPVTMAT FTMTLARVCL CPMIIGRGND QVAISSKFET REDIAVIRNY GNLLLEMSAV VPDGIVAFFT SYQYMESTVA SWYEQGILEN IQRNKLLFIE TQDGAETSVA LEKYQEACEN GRGAILLSVA RGKVSEGIDF VHHYGRAVIM FGVPYVYTQS RILKARLEYL RDQFQIREND FLTFDAMRHA AQCVGRAIRG KTDYGLMVFA DKRFARADKR GKLPRWIQEH LTDANLNLTV DEGVQVAKYF LRQMAQPFHR EDQLGLSLLS LEQLESEETL RRIEQIAQQL // ID ERCC2_DICDI Reviewed; 776 AA. AC Q55G81; O00836; DT 08-APR-2008, integrated into UniProtKB/Swiss-Prot. DT 24-MAY-2005, sequence version 1. DT 13-APR-2016, entry version 79. DE RecName: Full=TFIIH basal transcription factor complex helicase repD subunit; DE EC=3.6.4.12; DE AltName: Full=DNA excision repair cross-complementing protein-2 homolog; DE AltName: Full=DNA repair protein D; GN Name=repD; Synonyms=ercc2; ORFNames=DDB_G0267414; OS Dictyostelium discoideum (Slime mold). OC Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Dictyostelium. OX NCBI_TaxID=44689; RN [1] RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND DEVELOPMENTAL STAGE. RC STRAIN=AX4; RX PubMed=9171087; DOI=10.1093/nar/25.12.2365; RA Lee S.-K., Yu S.-L., Garcia M.X.U., Alexander H., Alexander S.; RT "Differential developmental expression of the rep B and rep D RT xeroderma pigmentosum related DNA helicase genes from Dictyostelium RT discoideum."; RL Nucleic Acids Res. 25:2365-2374(1997). RN [2] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=AX4; RX PubMed=15875012; DOI=10.1038/nature03481; RA Eichinger L., Pachebat J.A., Gloeckner G., Rajandream M.A., RA Sucgang R., Berriman M., Song J., Olsen R., Szafranski K., Xu Q., RA Tunggal B., Kummerfeld S., Madera M., Konfortov B.A., Rivero F., RA Bankier A.T., Lehmann R., Hamlin N., Davies R., Gaudet P., Fey P., RA Pilcher K., Chen G., Saunders D., Sodergren E.J., Davis P., RA Kerhornou A., Nie X., Hall N., Anjard C., Hemphill L., Bason N., RA Farbrother P., Desany B., Just E., Morio T., Rost R., Churcher C.M., RA Cooper J., Haydock S., van Driessche N., Cronin A., Goodhead I., RA Muzny D.M., Mourier T., Pain A., Lu M., Harper D., Lindsay R., RA Hauser H., James K.D., Quiles M., Madan Babu M., Saito T., RA Buchrieser C., Wardroper A., Felder M., Thangavelu M., Johnson D., RA Knights A., Loulseged H., Mungall K.L., Oliver K., Price C., RA Quail M.A., Urushihara H., Hernandez J., Rabbinowitsch E., Steffen D., RA Sanders M., Ma J., Kohara Y., Sharp S., Simmonds M.N., Spiegler S., RA Tivey A., Sugano S., White B., Walker D., Woodward J.R., Winckler T., RA Tanaka Y., Shaulsky G., Schleicher M., Weinstock G.M., Rosenthal A., RA Cox E.C., Chisholm R.L., Gibbs R.A., Loomis W.F., Platzer M., RA Kay R.R., Williams J.G., Dear P.H., Noegel A.A., Barrell B.G., RA Kuspa A.; RT "The genome of the social amoeba Dictyostelium discoideum."; RL Nature 435:43-57(2005). RN [3] RP INDUCTION BY UV. RX PubMed=9765592; DOI=10.1016/S0167-4781(98)00103-1; RA Lee S.-K., Yu S.-L., Alexander H., Alexander S.; RT "A mutation in repB, the dictyostelium homolog of the human xeroderma RT pigmentosum B gene, has increased sensitivity to UV-light but normal RT morphogenesis."; RL Biochim. Biophys. Acta 1399:161-172(1998). RN [4] RP INDUCTION. RX PubMed=9649625; DOI=10.1093/nar/26.14.3397; RA Yu S.-L., Lee S.-K., Alexander H., Alexander S.; RT "Rapid changes of nucleotide excision repair gene expression following RT UV-irradiation and cisplatin treatment of Dictyostelium discoideum."; RL Nucleic Acids Res. 26:3397-3403(1998). RN [5] RP INDUCTION, AND DEVELOPMENTAL STAGE. RX PubMed=11004503; DOI=10.1016/S0167-4781(00)00063-4; RA Garcia M.X.U., Foote C., van Es S., Devreotes P.N., Alexander S., RA Alexander H.; RT "Differential developmental expression and cell type specificity of RT Dictyostelium catalases and their response to oxidative stress and UV- RT light."; RL Biochim. Biophys. Acta 1492:295-310(2000). CC -!- FUNCTION: ATP-dependent 5'-3' DNA helicase, component of the core- CC TFIIH basal transcription factor. Involved in nucleotide excision CC repair (NER) of DNA by opening DNA around the damage, and in RNA CC transcription by RNA polymerase II by anchoring the CDK-activating CC kinase (CAK) complex to the core-TFIIH complex (By similarity). CC {ECO:0000250}. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC -!- COFACTOR: CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420; Evidence={ECO:0000250}; CC -!- COFACTOR: CC Name=[4Fe-4S] cluster; Xref=ChEBI:CHEBI:49883; CC Evidence={ECO:0000250}; CC Note=Binds 1 [4Fe-4S] cluster. {ECO:0000250}; CC -!- SUBUNIT: One of the six subunits forming the core-TFIIH basal CC transcription factor. {ECO:0000250}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}. CC -!- DEVELOPMENTAL STAGE: Levels accumulate after the removal of the CC food source and increase with the onset of development (expression CC peaks at 3-4 hours of development and decreases to a low baseline CC level by 7 hours). Expression remain elevated during chemotaxis CC and formation of multicellular assemblies, and then return to CC baseline levels for the rest of the development. CC {ECO:0000269|PubMed:11004503, ECO:0000269|PubMed:9171087}. CC -!- INDUCTION: Up-regulated in response to DNA damage due to UV light CC or exposure to cisplatin. Unaffected by exposure to hydrogen CC peroxide. {ECO:0000269|PubMed:11004503, CC ECO:0000269|PubMed:9649625, ECO:0000269|PubMed:9765592}. CC -!- SIMILARITY: Belongs to the helicase family. RAD3/XPD subfamily. CC {ECO:0000305}. CC -!- SIMILARITY: Contains 1 helicase ATP-binding domain. CC {ECO:0000255|PROSITE-ProRule:PRU00541}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; U77066; AAB62733.1; -; Genomic_DNA. DR EMBL; AAFI02000003; EAL73159.1; -; Genomic_DNA. DR RefSeq; XP_647302.1; XM_642210.1. DR ProteinModelPortal; Q55G81; -. DR STRING; 44689.DDB0191272; -. DR PaxDb; Q55G81; -. DR EnsemblProtists; DDB0191272; DDB0191272; DDB_G0267414. DR GeneID; 8616111; -. DR KEGG; ddi:DDB_G0267414; -. DR dictyBase; DDB_G0267414; repD. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; Q55G81; -. DR KO; K10844; -. DR OMA; KAMGRRQ; -. DR PhylomeDB; Q55G81; -. DR Reactome; R-DDI-113418; Formation of the Early Elongation Complex. DR Reactome; R-DDI-5696395; Formation of Incision Complex in GG-NER. DR Reactome; R-DDI-674695; RNA Polymerase II Pre-transcription Events. DR Reactome; R-DDI-6781823; Formation of TC-NER Pre-Incision Complex. DR Reactome; R-DDI-6782135; Dual incision in TC-NER. DR Reactome; R-DDI-6782210; Gap-filling DNA repair synthesis and ligation in TC-NER. DR Reactome; R-DDI-72086; mRNA Capping. DR Reactome; R-DDI-73776; RNA Polymerase II Promoter Escape. DR Reactome; R-DDI-73779; RNA Polymerase II Transcription Pre-Initiation And Promoter Opening. DR Reactome; R-DDI-75953; RNA Polymerase II Transcription Initiation. DR Reactome; R-DDI-75955; RNA Polymerase II Transcription Elongation. DR Reactome; R-DDI-76042; RNA Polymerase II Transcription Initiation And Promoter Clearance. DR Reactome; R-DDI-77075; RNA Pol II CTD phosphorylation and interaction with CE. DR PRO; PR:Q55G81; -. DR Proteomes; UP000002195; Chromosome 1. DR Proteomes; UP000002195; Unassembled WGS sequence. DR GO; GO:0005675; C:holo TFIIH complex; ISS:dictyBase. DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0043141; F:ATP-dependent 5'-3' DNA helicase activity; ISS:dictyBase. DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW. DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. DR GO; GO:0006974; P:cellular response to DNA damage stimulus; IEP:dictyBase. DR GO; GO:0032508; P:DNA duplex unwinding; ISS:GOC. DR GO; GO:0006289; P:nucleotide-excision repair; ISS:dictyBase. DR GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:UniProtKB-KW. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; ISS:dictyBase. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 2: Evidence at transcript level; KW 4Fe-4S; ATP-binding; Complete proteome; DNA damage; DNA repair; KW DNA-binding; Helicase; Hydrolase; Iron; Iron-sulfur; Magnesium; KW Metal-binding; Nucleotide-binding; Nucleus; Reference proteome; KW Transcription; Transcription regulation. FT CHAIN 1 776 TFIIH basal transcription factor complex FT helicase repD subunit. FT /FTId=PRO_0000328565. FT DOMAIN 7 277 Helicase ATP-binding. FT {ECO:0000255|PROSITE-ProRule:PRU00541}. FT NP_BIND 42 49 ATP. {ECO:0000255|PROSITE- FT ProRule:PRU00541}. FT MOTIF 228 231 DEAH box. FT COMPBIAS 756 769 Poly-Thr. FT METAL 115 115 Iron-sulfur (4Fe-4S). {ECO:0000250}. FT METAL 133 133 Iron-sulfur (4Fe-4S). {ECO:0000250}. FT METAL 150 150 Iron-sulfur (4Fe-4S). {ECO:0000250}. FT METAL 184 184 Iron-sulfur (4Fe-4S). {ECO:0000250}. FT CONFLICT 319 321 AEH -> PSI (in Ref. 1; AAB62733). FT {ECO:0000305}. SQ SEQUENCE 776 AA; 88278 MW; 3A779094B8ECD525 CRC64; MKFYIEDLLV YFPYSYIYPE QYSYMVALKR SLDNGGPCIL EMPSGTGKTV SLLSLISSYQ VKNPSIKLIY CSRTVPEIEQ ATEEARRVLQ YRNSEMGEES PKTLCMSMSS RRNLCIQPRV SEERDGKVVD ALCRELTSSW NRESPTSEKC KFFENFESNG KEILLEGVYS LEDLKEYGLK HQMCPYFLSR HMLNFANIVI FSYQYLLDPK IASLISSSFP SNSIVVFDEA HNIDNVCINA LSINIDNKLL DTSSKNIAKI NKQIEDIKKV DEKRLKDEYQ RLVNGLARSG STRADETTSD PVLPNDVIQE AVPGNIRKAE HFISLLRRVV DYLKSRLKSQ MLLSESPLAF LQGLYHATQI SSRTLRFCSS RLSSLLRTLR INDVNQFSGI SLIADFATLV GTYNNGFLII IEPYYQRQNN TYDQIFQFCC LDASIGMKPI FDKYRSVVIT SGTLSPLDIY TKMLNFRPTV VERLTMSLNR NCICPCILTR GSDQISISTK FDVRSDTAVV RNYGALLVEV SAIVPDGIIC FFTSYSYMEQ IVSVWNEMGL LNNILTNKLI FVETSDPAES ALALQNYKKA CDSGRGAVLL SVARGKVSEG IDFDNQYGRC VILYGIPYIN TESKVLRARL EFLRDRYQIR ENEFLTFDAM RTASQCVGRV IRGKSDYGIM IFADKRYNRL DKRNKLPQWI LQFCQPQHLN LSTDMAISLS KTFLREMGQP FSREEQLGKS LWSLEHVEKQ STSKPPQQQN SAINSTITTS TTTTTTTSTI SETHLT // ID ERCC2_HUMAN Reviewed; 760 AA. AC P18074; Q2TB78; Q2YDY2; Q7KZU6; Q8N721; DT 01-NOV-1990, integrated into UniProtKB/Swiss-Prot. DT 01-NOV-1990, sequence version 1. DT 11-MAY-2016, entry version 197. DE RecName: Full=TFIIH basal transcription factor complex helicase XPD subunit; DE EC=3.6.4.12; DE AltName: Full=Basic transcription factor 2 80 kDa subunit; DE Short=BTF2 p80; DE AltName: Full=CXPD; DE AltName: Full=DNA excision repair protein ERCC-2; DE AltName: Full=DNA repair protein complementing XP-D cells; DE AltName: Full=TFIIH basal transcription factor complex 80 kDa subunit; DE Short=TFIIH 80 kDa subunit; DE Short=TFIIH p80; DE AltName: Full=Xeroderma pigmentosum group D-complementing protein; GN Name=ERCC2; Synonyms=XPD, XPDC; OS Homo sapiens (Human). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; OC Catarrhini; Hominidae; Homo. OX NCBI_TaxID=9606; RN [1] RP NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1). RC TISSUE=Fibroblast; RX PubMed=2184031; RA Weber C.A., Salazar E.P., Stewart S.A., Thompson L.H.; RT "ERCC2: cDNA cloning and molecular characterization of a human RT nucleotide excision repair gene with high homology to yeast RAD3."; RL EMBO J. 9:1437-1447(1990). RN [2] RP NUCLEOTIDE SEQUENCE [GENOMIC DNA]. RC TISSUE=Fibroblast; RX PubMed=8786141; DOI=10.1006/geno.1996.0303; RA Lamerdin J.E., Stilwagen S.A., Ramirez M.H., Stubbs L., Carrano A.V.; RT "Sequence analysis of the ERCC2 gene regions in human, mouse, and RT hamster reveals three linked genes."; RL Genomics 34:399-409(1996). RN [3] RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND VARIANTS ASN-312 AND GLN-751. RG NIEHS SNPs program; RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases. RN [4] RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2). RA Kalnine N., Chen X., Rolfs A., Halleck A., Hines L., Eisenstein S., RA Koundinya M., Raphael J., Moreira D., Kelley T., LaBaer J., Lin Y., RA Phelan M., Farmer A.; RT "Cloning of human full-length CDSs in BD Creator(TM) system donor RT vector."; RL Submitted (MAY-2003) to the EMBL/GenBank/DDBJ databases. RN [5] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], AND VARIANT GLN-751. RA Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., RA Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., RA Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., RA Hannenhalli S., Turner R., Yooseph S., Lu F., Nusskern D.R., RA Shue B.C., Zheng X.H., Zhong F., Delcher A.L., Huson D.H., RA Kravitz S.A., Mouchard L., Reinert K., Remington K.A., Clark A.G., RA Waterman M.S., Eichler E.E., Adams M.D., Hunkapiller M.W., Myers E.W., RA Venter J.C.; RL Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases. RN [6] RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1), AND VARIANT RP GLN-751. RC TISSUE=Testis; RX PubMed=15489334; DOI=10.1101/gr.2596504; RG The MGC Project Team; RT "The status, quality, and expansion of the NIH full-length cDNA RT project: the Mammalian Gene Collection (MGC)."; RL Genome Res. 14:2121-2127(2004). RN [7] RP CHARACTERIZATION. RX PubMed=1729695; DOI=10.1073/pnas.89.1.261; RA Fletjer W.L., McDaniel L.D., Johns D., Friedberg E.C., Schultz R.A.; RT "Correction of Xeroderma pigmentosum complementation group D mutant RT cell phenotypes by chromosome and gene transfer: involvement of the RT human ERCC2 DNA repair gene."; RL Proc. Natl. Acad. Sci. U.S.A. 89:261-265(1992). RN [8] RP FUNCTION. RX PubMed=8413672; DOI=10.1038/365852a0; RA Sung P., Bailly V., Weber C.A., Thompson L.H., Prakash L., Prakash S.; RT "Human Xeroderma pigmentosum group D gene encodes a DNA helicase."; RL Nature 365:852-855(1993). RN [9] RP INTERACTION WITH EBV EBNA2. RX PubMed=7724549; DOI=10.1073/pnas.92.8.3259; RA Tong X., Drapkin R., Reinberg D., Kieff E.; RT "The 62- and 80-kDa subunits of transcription factor IIH mediate the RT interaction with Epstein-Barr virus nuclear protein 2."; RL Proc. Natl. Acad. Sci. U.S.A. 92:3259-3263(1995). RN [10] RP IDENTIFICATION IN THE TFIIH BASAL TRANSCRIPTION FACTOR. RX PubMed=9852112; DOI=10.1074/jbc.273.51.34444; RA Kershnar E., Wu S.-Y., Chiang C.-M.; RT "Immunoaffinity purification and functional characterization of human RT transcription factor IIH and RNA polymerase II from clonal cell lines RT that conditionally express epitope-tagged subunits of the multiprotein RT complexes."; RL J. Biol. Chem. 273:34444-34453(1998). RN [11] RP INTERACTION WITH GTF2H2. RX PubMed=9771713; DOI=10.1038/2491; RA Coin F., Marinoni J.-C., Rodolfo C., Fribourg S., Pedrini A.M., RA Egly J.-M.; RT "Mutations in the XPD helicase gene result in XP and TTD phenotypes, RT preventing interaction between XPD and the p44 subunit of TFIIH."; RL Nat. Genet. 20:184-188(1998). RN [12] RP MUTAGENESIS OF LYS-48, AND FUNCTION. RX PubMed=10024882; DOI=10.1016/S1097-2765(00)80177-X; RA Tirode F., Busso D., Coin F., Egly J.-M.; RT "Reconstitution of the transcription factor TFIIH: assignment of RT functions for the three enzymatic subunits, XPB, XPD, and cdk7."; RL Mol. Cell 3:87-95(1999). RN [13] RP FUNCTION, AND POSSIBLE PATHOLOGICAL MECHANISM OF VARIANT XP-D TRP-683. RX PubMed=15494306; DOI=10.1016/j.molcel.2004.10.007; RA Drane P., Compe E., Catez P., Chymkowitch P., Egly J.-M.; RT "Selective regulation of vitamin D receptor-responsive genes by RT TFIIH."; RL Mol. Cell 16:187-197(2004). RN [14] RP ISGYLATION. RX PubMed=16884686; DOI=10.1016/j.bbrc.2006.07.076; RA Takeuchi T., Inoue S., Yokosawa H.; RT "Identification and Herc5-mediated ISGylation of novel target RT proteins."; RL Biochem. Biophys. Res. Commun. 348:473-477(2006). RN [15] RP INTERACTION WITH ATF7IP. RX PubMed=19106100; DOI=10.1074/jbc.M807098200; RA Liu L., Ishihara K., Ichimura T., Fujita N., Hino S., Tomita S., RA Watanabe S., Saitoh N., Ito T., Nakao M.; RT "MCAF1/AM is involved in Sp1-mediated maintenance of cancer-associated RT telomerase activity."; RL J. Biol. Chem. 284:5165-5174(2009). RN [16] RP FUNCTION, IDENTIFICATION IN MMXD COMPLEX, INTERACTION WITH FAM196B, RP AND SUBCELLULAR LOCATION. RX PubMed=20797633; DOI=10.1016/j.molcel.2010.07.029; RA Ito S., Tan L.J., Andoh D., Narita T., Seki M., Hirano Y., Narita K., RA Kuraoka I., Hiraoka Y., Tanaka K.; RT "MMXD, a TFIIH-independent XPD-MMS19 protein complex involved in RT chromosome segregation."; RL Mol. Cell 39:632-640(2010). RN [17] RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. RX PubMed=21269460; DOI=10.1186/1752-0509-5-17; RA Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P., RA Buerckstuemmer T., Bennett K.L., Superti-Furga G., Colinge J.; RT "Initial characterization of the human central proteome."; RL BMC Syst. Biol. 5:17-17(2011). RN [18] RP IRON-SULFUR-BINDING, COFACTOR, AND MUTAGENESIS OF CYS-190. RX PubMed=22678361; DOI=10.1126/science.1219664; RA Gari K., Leon Ortiz A.M., Borel V., Flynn H., Skehel J.M., RA Boulton S.J.; RT "MMS19 links cytoplasmic iron-sulfur cluster assembly to DNA RT metabolism."; RL Science 337:243-245(2012). RN [19] RP VARIANT XP-D VAL-461. RX PubMed=7849702; DOI=10.1093/hmg/3.10.1783; RA Frederick G.D., Amirkhan R.H., Schultz R.A., Friedberg E.C.; RT "Structural and mutational analysis of the xeroderma pigmentosum group RT D (XPD) gene."; RL Hum. Mol. Genet. 3:1783-1788(1994). RN [20] RP VARIANTS TTD1 HIS-112; PRO-616; TRP-722 AND 488-VAL--MET-493 DEL. RX PubMed=7920640; DOI=10.1038/ng0694-189; RA Broughton B.C., Steingrimsdottir H., Weber C.A., Lehmann A.R.; RT "Mutations in the xeroderma pigmentosum group D DNA RT repair/transcription gene in patients with trichothiodystrophy."; RL Nat. Genet. 7:189-194(1994). RN [21] RP VARIANT XP-D ARG-675. RX PubMed=7825573; RA Broughton B.C., Thompson A.F., Harcourt S.A., Vermeulen W., RA Hoeijmakers J.H.J., Botta E., Stefanini M., King M.D., Weber C.A., RA Cole J., Arlett C.F., Lehmann A.R.; RT "Molecular and cellular analysis of the DNA repair defect in a patient RT in xeroderma pigmentosum complementation group D who has the clinical RT features of xeroderma pigmentosum and Cockayne syndrome."; RL Am. J. Hum. Genet. 56:167-174(1995). RN [22] RP VARIANTS XP-D. RX PubMed=7585650; RA Takayama K., Salazar E.P., Lehmann A.R., Stefanini M., Thompson L.H., RA Weber C.A.; RT "Defects in the DNA repair and transcription gene ERCC2 in the cancer- RT prone disorder xeroderma pigmentosum group D."; RL Cancer Res. 55:5656-5663(1995). RN [23] RP VARIANTS TTD1 CYS-658 AND ARG-713. RX PubMed=8571952; RA Takayama K., Salazar E.P., Broughton B.C., Lehmann A.R., Sarasin A., RA Thompson L.H., Weber C.A.; RT "Defects in the DNA repair and transcription gene ERCC2(XPD) in RT trichothiodystrophy."; RL Am. J. Hum. Genet. 58:263-270(1996). RN [24] RP VARIANT XP-D ARG-541. RX PubMed=9101292; RX DOI=10.1002/(SICI)1098-1004(1997)9:4<322::AID-HUMU4>3.0.CO;2-7; RA Kobayashi T., Kuraoka I., Saijo M., Nakatsu Y., Tanaka A., Someda Y., RA Fukuro S., Tanaka K.; RT "Mutations in the XPD gene leading to Xeroderma pigmentosum RT symptoms."; RL Hum. Mutat. 9:322-331(1997). RN [25] RP VARIANTS TTD1 VAL-461; 716-VAL--ARG-730 DEL AND PRO-725. RX PubMed=9195225; RX DOI=10.1002/(SICI)1098-1004(1997)9:6<519::AID-HUMU4>3.3.CO;2-N; RA Takayama K., Danks D.M., Salazar E.P., Cleaver J.E., Weber C.A.; RT "DNA repair characteristics and mutations in the ERCC2 DNA repair and RT transcription gene in a trichothiodystrophy patient."; RL Hum. Mutat. 9:519-525(1997). RN [26] RP VARIANTS TTD1/XP. RX PubMed=9238033; DOI=10.1073/pnas.94.16.8658; RA Taylor E.M., Broughton B.C., Botta E., Stefanini M., Sarasin A., RA Jaspers N.G.J., Fawcett H., Harcourt S.A., Arlett C.F., Lehmann A.R.; RT "Xeroderma pigmentosum and trichothiodystrophy are associated with RT different mutations in the XPD (ERCC2) repair/transcription gene."; RL Proc. Natl. Acad. Sci. U.S.A. 94:8658-8663(1997). RN [27] RP VARIANTS TTD1 HIS-112; TYR-259; VAL-461; THR-482 DEL; GLY-673 AND RP TRP-722. RX PubMed=9758621; DOI=10.1086/302063; RA Botta E., Nardo T., Broughton B.C., Marinoni S., Lehmann A.R., RA Stefanini M.; RT "Analysis of mutations in the XPD gene in Italian patients with RT trichothiodystrophy: site of mutation correlates with repair RT deficiency, but gene dosage appears to determine clinical severity."; RL Am. J. Hum. Genet. 63:1036-1048(1998). RN [28] RP REVIEW ON VARIANTS XP-D. RX PubMed=10447254; RX DOI=10.1002/(SICI)1098-1004(1999)14:1<9::AID-HUMU2>3.0.CO;2-6; RA Cleaver J.E., Thompson L.H., Richardson A.S., States J.C.; RT "A summary of mutations in the UV-sensitive disorders: xeroderma RT pigmentosum, Cockayne syndrome, and trichothiodystrophy."; RL Hum. Mutat. 14:9-22(1999). RN [29] RP VARIANTS COFS2 TRP-616 AND ASN-681. RX PubMed=11443545; DOI=10.1086/321295; RA Graham J.M. Jr., Anyane-Yeboa K., Raams A., Appeldoorn E., RA Kleijer W.J., Garritsen V.H., Busch D., Edersheim T.G., RA Jaspers N.G.J.; RT "Cerebro-oculo-facio-skeletal syndrome with a nucleotide excision- RT repair defect and a mutated XPD gene, with prenatal diagnosis in a RT triplet pregnancy."; RL Am. J. Hum. Genet. 69:291-300(2001). RN [30] RP VARIANT CYS-616. RX PubMed=11319176; RA Caggana M., Kilgallen J., Conroy J.M., Wiencke J.K., Kelsey K.T., RA Miike R., Chen P., Wrensch M.R.; RT "Associations between ercc2 polymorphisms and gliomas."; RL Cancer Epidemiol. Biomarkers Prev. 10:355-360(2001). RN [31] RP VARIANTS ASN-312 AND GLN-751. RX PubMed=11245433; RA Spitz M.R., Wu X., Wang Y., Wang L.E., Shete S., Amos C.I., Guo Z., RA Lei L., Mohrenweiser H., Wei Q.; RT "Modulation of nucleotide excision repair capacity by XPD RT polymorphisms in lung cancer patients."; RL Cancer Res. 61:1354-1357(2001). RN [32] RP VARIANTS ASN-312 AND GLN-751. RX PubMed=11470747; DOI=10.1093/carcin/22.8.1185; RA Hemminki K., Xu G., Angelini S., Snellman E., Jansen C.T., Lambert B., RA Hou S.M.; RT "XPD exon 10 and 23 polymorphisms and DNA repair in human skin in RT situ."; RL Carcinogenesis 22:1185-1188(2001). RN [33] RP REVIEW ON VARIANTS. RX PubMed=11156600; DOI=10.1101/gad.859501; RA Lehmann A.R.; RT "The xeroderma pigmentosum group D (XPD) gene: one gene, two RT functions, three diseases."; RL Genes Dev. 15:15-23(2001). RN [34] RP VARIANTS XP-D HIS-112; PRO-485 AND 582-GLU-LYS-583 DELINS VAL-SER-GLU, RP AND VARIANTS ASN-312 AND GLN-751. RX PubMed=11709541; DOI=10.1093/hmg/10.22.2539; RA Broughton B.C., Berneburg M., Fawcett H., Taylor E.M., Arlett C.F., RA Nardo T., Stefanini M., Menefee E., Price V.H., Queille S., RA Sarasin A., Bohnert E., Krutmann J., Davidson R., Kraemer K.H., RA Lehmann A.R.; RT "Two individuals with features of both xeroderma pigmentosum and RT trichothiodystrophy highlight the complexity of the clinical outcomes RT of mutations in the XPD gene."; RL Hum. Mol. Genet. 10:2539-2547(2001). RN [35] RP VARIANTS TTD1 CYS-658 AND ARG-713. RX PubMed=11242112; DOI=10.1038/85864; RA Vermeulen W., Rademakers S., Jaspers N.G.J., Appeldoorn E., Raams A., RA Klein B., Kleijer W.J., Hansen L.K., Hoeijmakers J.H.J.; RT "A temperature-sensitive disorder in basal transcription and DNA RT repair in humans."; RL Nat. Genet. 27:299-303(2001). CC -!- FUNCTION: ATP-dependent 5'-3' DNA helicase, component of the core- CC TFIIH basal transcription factor. Involved in nucleotide excision CC repair (NER) of DNA by opening DNA around the damage, and in RNA CC transcription by RNA polymerase II by anchoring the CDK-activating CC kinase (CAK) complex, composed of CDK7, cyclin H and MAT1, to the CC core-TFIIH complex. Involved in the regulation of vitamin-D CC receptor activity. As part of the mitotic spindle-associated MMXD CC complex it plays a role in chromosome segregation. Might have a CC role in aging process and could play a causative role in the CC generation of skin cancers. {ECO:0000269|PubMed:10024882, CC ECO:0000269|PubMed:15494306, ECO:0000269|PubMed:20797633, CC ECO:0000269|PubMed:8413672}. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC -!- COFACTOR: CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420; CC Evidence={ECO:0000269|PubMed:22678361}; CC -!- COFACTOR: CC Name=[4Fe-4S] cluster; Xref=ChEBI:CHEBI:49883; CC Evidence={ECO:0000269|PubMed:22678361}; CC Note=Binds 1 [4Fe-4S] cluster. {ECO:0000269|PubMed:22678361}; CC -!- SUBUNIT: One of the six subunits forming the core-TFIIH basal CC transcription factor which associates with the CAK complex CC composed of CDK7, CCNH/cyclin H and MNAT1 to form the TFIIH basal CC transcription factor. The interaction with GTF2H2 results in the CC stimulation of the 5'-->3' helicase activity. Component of the CC MMXD complex, which includes CIAO1, ERCC2, FAM96B, MMS19 and CC SLC25A5. Interacts with FAM196B; the interaction is direct. CC Interacts with ATF7IP. Interacts with Epstein-Barr virus EBNA2. CC {ECO:0000269|PubMed:19106100, ECO:0000269|PubMed:20797633, CC ECO:0000269|PubMed:7724549, ECO:0000269|PubMed:9771713, CC ECO:0000269|PubMed:9852112}. CC -!- INTERACTION: CC Q6P1K8:GTF2H2C_2; NbExp=3; IntAct=EBI-6380590, EBI-8469755; CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:20797633}. CC Cytoplasm, cytoskeleton, spindle {ECO:0000269|PubMed:20797633}. CC -!- ALTERNATIVE PRODUCTS: CC Event=Alternative splicing; Named isoforms=2; CC Name=1; CC IsoId=P18074-1; Sequence=Displayed; CC Name=2; CC IsoId=P18074-2; Sequence=VSP_043132, VSP_043133, VSP_043134; CC Note=No experimental confirmation available.; CC -!- PTM: ISGylated. {ECO:0000305|PubMed:16884686}. CC -!- DISEASE: Xeroderma pigmentosum complementation group D (XP-D) CC [MIM:278730]: An autosomal recessive pigmentary skin disorder CC characterized by solar hypersensitivity of the skin, high CC predisposition for developing cancers on areas exposed to sunlight CC and, in some cases, neurological abnormalities. The skin develops CC marked freckling and other pigmentation abnormalities. Some XP-D CC patients present features of Cockayne syndrome, including CC cachectic dwarfism, pigmentary retinopathy, ataxia, decreased CC nerve conduction velocities. The phenotype combining xeroderma CC pigmentosum and Cockayne syndrome traits is referred to as XP-CS CC complex. {ECO:0000269|PubMed:11709541, ECO:0000269|PubMed:7585650, CC ECO:0000269|PubMed:7825573, ECO:0000269|PubMed:7849702, CC ECO:0000269|PubMed:9101292}. Note=The disease is caused by CC mutations affecting the gene represented in this entry. CC -!- DISEASE: Trichothiodystrophy 1, photosensitive (TTD1) CC [MIM:601675]: A form of trichothiodystrophy, an autosomal CC recessive disease characterized by sulfur-deficient brittle hair CC and multisystem variable abnormalities. The spectrum of clinical CC features varies from mild disease with only hair involvement to CC severe disease with cutaneous, neurologic and profound CC developmental defects. Ichthyosis, intellectual and developmental CC disabilities, decreased fertility, abnormal characteristics at CC birth, ocular abnormalities, short stature, and infections are CC common manifestations. There are both photosensitive and non- CC photosensitive forms of the disorder. TTD1 patients manifest CC cutaneous photosensitivity. {ECO:0000269|PubMed:11242112, CC ECO:0000269|PubMed:7920640, ECO:0000269|PubMed:8571952, CC ECO:0000269|PubMed:9195225, ECO:0000269|PubMed:9238033, CC ECO:0000269|PubMed:9758621}. Note=The disease is caused by CC mutations affecting the gene represented in this entry. CC -!- DISEASE: Cerebro-oculo-facio-skeletal syndrome 2 (COFS2) CC [MIM:610756]: A disorder of prenatal onset characterized by CC microcephaly, congenital cataracts, facial dysmorphism, neurogenic CC arthrogryposis, growth failure and severe psychomotor retardation. CC COFS is considered to be part of the nucleotide-excision repair CC disorders spectrum that include also xeroderma pigmentosum, CC trichothiodystrophy and Cockayne syndrome. CC {ECO:0000269|PubMed:11443545}. Note=The disease is caused by CC mutations affecting the gene represented in this entry. CC -!- SIMILARITY: Belongs to the helicase family. RAD3/XPD subfamily. CC {ECO:0000305}. CC -!- SIMILARITY: Contains 1 helicase ATP-binding domain. CC {ECO:0000255|PROSITE-ProRule:PRU00541}. CC -!- SEQUENCE CAUTION: CC Sequence=AAM45142.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305}; CC -!- WEB RESOURCE: Name=Allelic variations of the XP genes; CC URL="http://www.xpmutations.org/"; CC -!- WEB RESOURCE: Name=Atlas of Genetics and Cytogenetics in Oncology CC and Haematology; CC URL="http://atlasgeneticsoncology.org/Genes/XPDID297.html"; CC -!- WEB RESOURCE: Name=NIEHS-SNPs; CC URL="http://egp.gs.washington.edu/data/ercc2/"; CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; X52221; CAA36463.1; -; mRNA. DR EMBL; X52222; CAA36464.1; -; mRNA. DR EMBL; L47234; AAL48323.1; -; Genomic_DNA. DR EMBL; AY092780; AAM45142.1; ALT_SEQ; Genomic_DNA. DR EMBL; BT006883; AAP35529.1; -; mRNA. DR EMBL; CH471126; EAW57341.1; -; Genomic_DNA. DR EMBL; BC108255; AAI08256.1; -; mRNA. DR EMBL; BC110523; AAI10524.1; -; mRNA. DR CCDS; CCDS33049.1; -. [P18074-1] DR CCDS; CCDS46112.1; -. [P18074-2] DR PIR; S10888; S10888. DR RefSeq; NP_000391.1; NM_000400.3. [P18074-1] DR RefSeq; NP_001124339.1; NM_001130867.1. [P18074-2] DR UniGene; Hs.487294; -. DR ProteinModelPortal; P18074; -. DR SMR; P18074; 35-258. DR BioGrid; 108380; 34. DR DIP; DIP-644N; -. DR IntAct; P18074; 14. DR MINT; MINT-3008891; -. DR STRING; 9606.ENSP00000375809; -. DR iPTMnet; P18074; -. DR PhosphoSite; P18074; -. DR BioMuta; ERCC2; -. DR DMDM; 119540; -. DR EPD; P18074; -. DR MaxQB; P18074; -. DR PaxDb; P18074; -. DR PRIDE; P18074; -. DR DNASU; 2068; -. DR Ensembl; ENST00000391945; ENSP00000375809; ENSG00000104884. [P18074-1] DR Ensembl; ENST00000485403; ENSP00000431229; ENSG00000104884. [P18074-2] DR GeneID; 2068; -. DR KEGG; hsa:2068; -. DR UCSC; uc002pbj.3; human. [P18074-1] DR CTD; 2068; -. DR GeneCards; ERCC2; -. DR GeneReviews; ERCC2; -. DR HGNC; HGNC:3434; ERCC2. DR HPA; CAB005375; -. DR HPA; HPA038057; -. DR MalaCards; ERCC2; -. DR MIM; 126340; gene. DR MIM; 278730; phenotype. DR MIM; 601675; phenotype. DR MIM; 610756; phenotype. DR neXtProt; NX_P18074; -. DR Orphanet; 1466; COFS syndrome. DR Orphanet; 33364; Trichothiodystrophy. DR Orphanet; 276258; Xeroderma pigmentosum complementation group D. DR PharmGKB; PA27848; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR GeneTree; ENSGT00550000075092; -. DR HOGENOM; HOG000205390; -. DR HOVERGEN; HBG051498; -. DR InParanoid; P18074; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG70W3CM; -. DR PhylomeDB; P18074; -. DR TreeFam; TF101232; -. DR Reactome; R-HSA-112382; Formation of RNA Pol II elongation complex. DR Reactome; R-HSA-113418; Formation of the Early Elongation Complex. DR Reactome; R-HSA-167152; Formation of HIV elongation complex in the absence of HIV Tat. DR Reactome; R-HSA-167158; Formation of the HIV-1 Early Elongation Complex. DR Reactome; R-HSA-167160; RNA Pol II CTD phosphorylation and interaction with CE. DR Reactome; R-HSA-167161; HIV Transcription Initiation. DR Reactome; R-HSA-167162; RNA Polymerase II HIV Promoter Escape. DR Reactome; R-HSA-167172; Transcription of the HIV genome. DR Reactome; R-HSA-167200; Formation of HIV-1 elongation complex containing HIV-1 Tat. DR Reactome; R-HSA-167246; Tat-mediated elongation of the HIV-1 transcript. DR Reactome; R-HSA-2564830; Cytosolic iron-sulfur cluster assembly. DR Reactome; R-HSA-427413; NoRC negatively regulates rRNA expression. DR Reactome; R-HSA-5696395; Formation of Incision Complex in GG-NER. DR Reactome; R-HSA-5696400; Dual Incision in GG-NER. DR Reactome; R-HSA-674695; RNA Polymerase II Pre-transcription Events. DR Reactome; R-HSA-6781823; Formation of TC-NER Pre-Incision Complex. DR Reactome; R-HSA-6781827; Transcription-Coupled Nucleotide Excision Repair (TC-NER). DR Reactome; R-HSA-6782135; Dual incision in TC-NER. DR Reactome; R-HSA-6782210; Gap-filling DNA repair synthesis and ligation in TC-NER. DR Reactome; R-HSA-72086; mRNA Capping. DR Reactome; R-HSA-73762; RNA Polymerase I Transcription Initiation. DR Reactome; R-HSA-73772; RNA Polymerase I Promoter Escape. DR Reactome; R-HSA-73776; RNA Polymerase II Promoter Escape. DR Reactome; R-HSA-73777; RNA Polymerase I Chain Elongation. DR Reactome; R-HSA-73779; RNA Polymerase II Transcription Pre-Initiation And Promoter Opening. DR Reactome; R-HSA-73863; RNA Polymerase I Transcription Termination. DR Reactome; R-HSA-75953; RNA Polymerase II Transcription Initiation. DR Reactome; R-HSA-75955; RNA Polymerase II Transcription Elongation. DR Reactome; R-HSA-76042; RNA Polymerase II Transcription Initiation And Promoter Clearance. DR Reactome; R-HSA-77075; RNA Pol II CTD phosphorylation and interaction with CE. DR ChiTaRS; ERCC2; human. DR GeneWiki; ERCC2; -. DR GenomeRNAi; 2068; -. DR NextBio; 8409; -. DR PRO; PR:P18074; -. DR Proteomes; UP000005640; Chromosome 19. DR Bgee; P18074; -. DR CleanEx; HS_ERCC2; -. DR ExpressionAtlas; P18074; baseline and differential. DR Genevisible; P18074; HS. DR GO; GO:0000439; C:core TFIIH complex; IEA:Ensembl. DR GO; GO:0005737; C:cytoplasm; IDA:UniProtKB. DR GO; GO:0005675; C:holo TFIIH complex; IDA:UniProtKB. DR GO; GO:0071817; C:MMXD complex; IDA:UniProtKB. DR GO; GO:0005654; C:nucleoplasm; TAS:Reactome. DR GO; GO:0005634; C:nucleus; IDA:UniProtKB. DR GO; GO:0005819; C:spindle; IDA:UniProtKB. DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW. DR GO; GO:0043139; F:5'-3' DNA helicase activity; IDA:UniProtKB. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW. DR GO; GO:0008094; F:DNA-dependent ATPase activity; TAS:UniProtKB. DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. DR GO; GO:0008022; F:protein C-terminus binding; IPI:UniProtKB. DR GO; GO:0047485; F:protein N-terminus binding; IPI:UniProtKB. DR GO; GO:0006370; P:7-methylguanosine mRNA capping; TAS:Reactome. DR GO; GO:0007568; P:aging; IEA:Ensembl. DR GO; GO:0006915; P:apoptotic process; IMP:UniProtKB. DR GO; GO:0030282; P:bone mineralization; IEA:Ensembl. DR GO; GO:0008283; P:cell proliferation; IEA:Ensembl. DR GO; GO:0032289; P:central nervous system myelin formation; IEA:Ensembl. DR GO; GO:0007059; P:chromosome segregation; IMP:UniProtKB. DR GO; GO:0032508; P:DNA duplex unwinding; IDA:GOC. DR GO; GO:0006281; P:DNA repair; TAS:Reactome. DR GO; GO:0040016; P:embryonic cleavage; IEA:Ensembl. DR GO; GO:0043249; P:erythrocyte maturation; IEA:Ensembl. DR GO; GO:0030198; P:extracellular matrix organization; IEA:Ensembl. DR GO; GO:0010467; P:gene expression; TAS:Reactome. DR GO; GO:0070911; P:global genome nucleotide-excision repair; TAS:Reactome. DR GO; GO:0035315; P:hair cell differentiation; IMP:UniProtKB. DR GO; GO:0048820; P:hair follicle maturation; IEA:Ensembl. DR GO; GO:0060218; P:hematopoietic stem cell differentiation; IEA:Ensembl. DR GO; GO:0001701; P:in utero embryonic development; IEA:Ensembl. DR GO; GO:0035264; P:multicellular organism growth; IEA:Ensembl. DR GO; GO:0045814; P:negative regulation of gene expression, epigenetic; TAS:Reactome. DR GO; GO:0006289; P:nucleotide-excision repair; NAS:UniProtKB. DR GO; GO:0033683; P:nucleotide-excision repair, DNA incision; IMP:UniProtKB. DR GO; GO:0043388; P:positive regulation of DNA binding; IEA:Ensembl. DR GO; GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB. DR GO; GO:0045893; P:positive regulation of transcription, DNA-templated; IDA:UniProtKB. DR GO; GO:0050434; P:positive regulation of viral transcription; TAS:Reactome. DR GO; GO:0009791; P:post-embryonic development; IEA:Ensembl. DR GO; GO:0006468; P:protein phosphorylation; IDA:GOC. DR GO; GO:0040029; P:regulation of gene expression, epigenetic; TAS:Reactome. DR GO; GO:1901990; P:regulation of mitotic cell cycle phase transition; IMP:UniProtKB. DR GO; GO:0001666; P:response to hypoxia; IEA:Ensembl. DR GO; GO:0006979; P:response to oxidative stress; IMP:UniProtKB. DR GO; GO:0044281; P:small molecule metabolic process; TAS:Reactome. DR GO; GO:0021510; P:spinal cord development; IEA:Ensembl. DR GO; GO:0006363; P:termination of RNA polymerase I transcription; TAS:Reactome. DR GO; GO:0006362; P:transcription elongation from RNA polymerase I promoter; TAS:Reactome. DR GO; GO:0006368; P:transcription elongation from RNA polymerase II promoter; TAS:Reactome. DR GO; GO:0006360; P:transcription from RNA polymerase I promoter; TAS:Reactome. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IDA:UniProtKB. DR GO; GO:0006361; P:transcription initiation from RNA polymerase I promoter; TAS:Reactome. DR GO; GO:0006367; P:transcription initiation from RNA polymerase II promoter; TAS:Reactome. DR GO; GO:0006283; P:transcription-coupled nucleotide-excision repair; IDA:UniProtKB. DR GO; GO:0009650; P:UV protection; IGI:MGI. DR GO; GO:0016032; P:viral process; TAS:Reactome. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 1: Evidence at protein level; KW 4Fe-4S; Alternative splicing; ATP-binding; Cataract; KW Chromosome partition; Cockayne syndrome; Complete proteome; Cytoplasm; KW Cytoskeleton; Deafness; Disease mutation; DNA damage; DNA repair; KW DNA-binding; Dwarfism; Helicase; Host-virus interaction; Hydrolase; KW Ichthyosis; Iron; Iron-sulfur; Magnesium; Metal-binding; KW Nucleotide-binding; Nucleus; Polymorphism; Reference proteome; KW Transcription; Transcription regulation; Ubl conjugation; KW Xeroderma pigmentosum. FT CHAIN 1 760 TFIIH basal transcription factor complex FT helicase XPD subunit. FT /FTId=PRO_0000101980. FT DOMAIN 7 283 Helicase ATP-binding. FT {ECO:0000255|PROSITE-ProRule:PRU00541}. FT NP_BIND 42 49 ATP. {ECO:0000255|PROSITE- FT ProRule:PRU00541}. FT REGION 438 637 Mediates interaction with MMS19. FT MOTIF 234 237 DEAH box. FT MOTIF 682 695 Nuclear localization signal. FT {ECO:0000255}. FT METAL 116 116 Iron-sulfur (4Fe-4S). {ECO:0000250}. FT METAL 134 134 Iron-sulfur (4Fe-4S). {ECO:0000250}. FT METAL 155 155 Iron-sulfur (4Fe-4S). {ECO:0000250}. FT METAL 190 190 Iron-sulfur (4Fe-4S). {ECO:0000305}. FT VAR_SEQ 1 24 Missing (in isoform 2). FT {ECO:0000303|Ref.4}. FT /FTId=VSP_043132. FT VAR_SEQ 414 429 FTIIIEPFDDRTPTIA -> QAQHCGSSRNQKRSHP (in FT isoform 2). {ECO:0000303|Ref.4}. FT /FTId=VSP_043133. FT VAR_SEQ 430 760 Missing (in isoform 2). FT {ECO:0000303|Ref.4}. FT /FTId=VSP_043134. FT VARIANT 47 47 G -> R (in XP-D). FT /FTId=VAR_008187. FT VARIANT 76 76 T -> A (in XP-D). FT /FTId=VAR_017282. FT VARIANT 112 112 R -> H (in TTD1 and XP-D). FT {ECO:0000269|PubMed:11709541, FT ECO:0000269|PubMed:7920640, FT ECO:0000269|PubMed:9758621}. FT /FTId=VAR_003622. FT VARIANT 199 199 I -> M (in dbSNP:rs1799791). FT /FTId=VAR_011412. FT VARIANT 201 201 H -> Y (in dbSNP:rs1799792). FT /FTId=VAR_011413. FT VARIANT 234 234 D -> N (in XP-D). FT /FTId=VAR_008188. FT VARIANT 259 259 C -> Y (in TTD1). FT {ECO:0000269|PubMed:9758621}. FT /FTId=VAR_008189. FT VARIANT 312 312 D -> N (in dbSNP:rs1799793). FT {ECO:0000269|PubMed:11245433, FT ECO:0000269|PubMed:11470747, FT ECO:0000269|PubMed:11709541, FT ECO:0000269|Ref.3}. FT /FTId=VAR_011414. FT VARIANT 461 461 L -> V (in XP-D and TTD1). FT {ECO:0000269|PubMed:7849702, FT ECO:0000269|PubMed:9195225, FT ECO:0000269|PubMed:9758621}. FT /FTId=VAR_003623. FT VARIANT 482 482 Missing (in TTD1). FT {ECO:0000269|PubMed:9758621}. FT /FTId=VAR_008190. FT VARIANT 485 485 L -> P (in XP-D; the corresponding FT mutation in fission yeast causes complete FT loss of activity). FT {ECO:0000269|PubMed:11709541}. FT /FTId=VAR_017283. FT VARIANT 487 487 R -> G (in TTD1). FT /FTId=VAR_017284. FT VARIANT 488 493 Missing (in TTD1; mild). FT {ECO:0000269|PubMed:7920640}. FT /FTId=VAR_003624. FT VARIANT 511 511 R -> Q (in XP-D). FT /FTId=VAR_017285. FT VARIANT 541 541 S -> R (in XP-D; mild; FT dbSNP:rs121913019). FT {ECO:0000269|PubMed:9101292}. FT /FTId=VAR_003625. FT VARIANT 542 542 Y -> C (in XP-D). FT /FTId=VAR_008191. FT VARIANT 582 583 EK -> VSE (in XP-D). FT {ECO:0000269|PubMed:11709541}. FT /FTId=VAR_017286. FT VARIANT 592 592 R -> P (in TTD1). FT /FTId=VAR_017287. FT VARIANT 594 594 A -> P (in TTD1). FT /FTId=VAR_017288. FT VARIANT 601 601 R -> L (in XP-D). FT /FTId=VAR_008192. FT VARIANT 601 601 R -> W (in XP-D). FT /FTId=VAR_017289. FT VARIANT 602 602 G -> D (in XP-D; combined with features FT of Cockayne syndrome). FT /FTId=VAR_003627. FT VARIANT 616 616 R -> C. {ECO:0000269|PubMed:11319176}. FT /FTId=VAR_011415. FT VARIANT 616 616 R -> P (in XP-D and TTD1). FT {ECO:0000269|PubMed:7920640}. FT /FTId=VAR_003626. FT VARIANT 616 616 R -> W (in XP-D and COFS2). FT {ECO:0000269|PubMed:11443545}. FT /FTId=VAR_008193. FT VARIANT 658 658 R -> C (in TTD1). FT {ECO:0000269|PubMed:11242112, FT ECO:0000269|PubMed:8571952}. FT /FTId=VAR_008194. FT VARIANT 658 658 R -> G (in TTD1). FT /FTId=VAR_017290. FT VARIANT 658 658 R -> H (in TTD1). FT /FTId=VAR_008195. FT VARIANT 663 663 C -> R (in TTD1). FT /FTId=VAR_017291. FT VARIANT 666 666 R -> W (in XP-D). FT /FTId=VAR_017292. FT VARIANT 673 673 D -> G (in TTD1). FT {ECO:0000269|PubMed:9758621}. FT /FTId=VAR_008196. FT VARIANT 675 675 G -> R (in XP-D/CS; severe form). FT {ECO:0000269|PubMed:7825573}. FT /FTId=VAR_003628. FT VARIANT 681 681 D -> N (in XP-D and COFS2). FT {ECO:0000269|PubMed:11443545}. FT /FTId=VAR_017293. FT VARIANT 683 683 R -> Q (in XP-D). FT /FTId=VAR_008197. FT VARIANT 683 683 R -> W (in XP-D; vitamin D-mediated FT activation of CYP24A1 is impaired in FT patient fibroblasts due to altered TFIIH- FT dependent phosphorylation of ETS1, FT subsequent impaired cooperation of ETS1 FT with VDR and altered VDR recruitment to FT CYP24A1 promoter; dbSNP:rs41556519). FT {ECO:0000269|PubMed:15494306}. FT /FTId=VAR_008198. FT VARIANT 713 713 G -> R (in TTD1). FT {ECO:0000269|PubMed:11242112, FT ECO:0000269|PubMed:8571952}. FT /FTId=VAR_008199. FT VARIANT 716 730 Missing (in XP-D and TTD1). FT {ECO:0000269|PubMed:9195225}. FT /FTId=VAR_003629. FT VARIANT 722 722 R -> W (in TTD1). FT {ECO:0000269|PubMed:7920640, FT ECO:0000269|PubMed:9758621}. FT /FTId=VAR_003630. FT VARIANT 725 725 A -> P (in TTD1). FT {ECO:0000269|PubMed:9195225}. FT /FTId=VAR_003631. FT VARIANT 751 751 K -> Q (polymorphism; may be associated FT with increased susceptibility to DNA FT damage; dbSNP:rs13181). FT {ECO:0000269|PubMed:11245433, FT ECO:0000269|PubMed:11470747, FT ECO:0000269|PubMed:11709541, FT ECO:0000269|PubMed:15489334, FT ECO:0000269|Ref.3, ECO:0000269|Ref.5}. FT /FTId=VAR_011416. FT MUTAGEN 48 48 K->R: Decreased transcriptional activity FT of the reconstituted TFIIH complex. FT {ECO:0000269|PubMed:10024882}. FT MUTAGEN 190 190 C->S: Reduced iron-sulfur-binding. Iron- FT sulfur-binding is further decreased in FT absence of MMS19. FT {ECO:0000269|PubMed:22678361}. SQ SEQUENCE 760 AA; 86909 MW; 746C0888CDF2E331 CRC64; MKLNVDGLLV YFPYDYIYPE QFSYMRELKR TLDAKGHGVL EMPSGTGKTV SLLALIMAYQ RAYPLEVTKL IYCSRTVPEI EKVIEELRKL LNFYEKQEGE KLPFLGLALS SRKNLCIHPE VTPLRFGKDV DGKCHSLTAS YVRAQYQHDT SLPHCRFYEE FDAHGREVPL PAGIYNLDDL KALGRRQGWC PYFLARYSIL HANVVVYSYH YLLDPKIADL VSKELARKAV VVFDEAHNID NVCIDSMSVN LTRRTLDRCQ GNLETLQKTV LRIKETDEQR LRDEYRRLVE GLREASAARE TDAHLANPVL PDEVLQEAVP GSIRTAEHFL GFLRRLLEYV KWRLRVQHVV QESPPAFLSG LAQRVCIQRK PLRFCAERLR SLLHTLEITD LADFSPLTLL ANFATLVSTY AKGFTIIIEP FDDRTPTIAN PILHFSCMDA SLAIKPVFER FQSVIITSGT LSPLDIYPKI LDFHPVTMAT FTMTLARVCL CPMIIGRGND QVAISSKFET REDIAVIRNY GNLLLEMSAV VPDGIVAFFT SYQYMESTVA SWYEQGILEN IQRNKLLFIE TQDGAETSVA LEKYQEACEN GRGAILLSVA RGKVSEGIDF VHHYGRAVIM FGVPYVYTQS RILKARLEYL RDQFQIREND FLTFDAMRHA AQCVGRAIRG KTDYGLMVFA DKRFARGDKR GKLPRWIQEH LTDANLNLTV DEGVQVAKYF LRQMAQPFHR EDQLGLSLLS LEQLESEETL KRIEQIAQQL // ID ERCC2_MOUSE Reviewed; 760 AA. AC O08811; Q8C487; Q9DC01; DT 01-NOV-1997, integrated into UniProtKB/Swiss-Prot. DT 27-JUL-2011, sequence version 2. DT 13-APR-2016, entry version 137. DE RecName: Full=TFIIH basal transcription factor complex helicase XPD subunit; DE EC=3.6.4.12; DE AltName: Full=CXPD; DE AltName: Full=DNA excision repair protein ERCC-2; DE AltName: Full=DNA repair protein complementing XP-D cells; DE AltName: Full=Xeroderma pigmentosum group D-complementing protein; GN Name=Ercc2; Synonyms=Xpd; OS Mus musculus (Mouse). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; OC Muroidea; Muridae; Murinae; Mus; Mus. OX NCBI_TaxID=10090; RN [1] RP NUCLEOTIDE SEQUENCE [MRNA]. RX PubMed=9426063; RA de Boer J., Donker I., de Wit J., Hoeijmakers J.H.J., Weeda G.; RT "Disruption of the mouse xeroderma pigmentosum group D DNA RT repair/basal transcription gene results in preimplantation RT lethality."; RL Cancer Res. 58:89-94(1998). RN [2] RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. RC STRAIN=C57BL/6J; TISSUE=Lung; RX PubMed=16141072; DOI=10.1126/science.1112014; RA Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., RA Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., RA Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., RA Davis M.J., Wilming L.G., Aidinis V., Allen J.E., RA Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., RA Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., RA Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., RA Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., RA di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., RA Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., RA Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., RA Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., RA Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., RA Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., RA Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., RA Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., RA Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., RA Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., RA Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., RA Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., RA Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., RA Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., RA Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., RA Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., RA Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., RA Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., RA Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., RA Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., RA Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., RA Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., RA Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., RA Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., RA Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., RA Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., RA Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., RA Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., RA Hayashizaki Y.; RT "The transcriptional landscape of the mammalian genome."; RL Science 309:1559-1563(2005). RN [3] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RA Mural R.J., Adams M.D., Myers E.W., Smith H.O., Venter J.C.; RL Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases. RN [4] RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. RC TISSUE=Testis; RX PubMed=21183079; DOI=10.1016/j.cell.2010.12.001; RA Huttlin E.L., Jedrychowski M.P., Elias J.E., Goswami T., Rad R., RA Beausoleil S.A., Villen J., Haas W., Sowa M.E., Gygi S.P.; RT "A tissue-specific atlas of mouse protein phosphorylation and RT expression."; RL Cell 143:1174-1189(2010). CC -!- FUNCTION: ATP-dependent 5'-3' DNA helicase, component of the core- CC TFIIH basal transcription factor. Involved in nucleotide excision CC repair (NER) of DNA by opening DNA around the damage, and in RNA CC transcription by RNA polymerase II by anchoring the CDK-activating CC kinase (CAK) complex, composed of CDK7, cyclin H and MAT1, to the CC core-TFIIH complex. Involved in the regulation of vitamin-D CC receptor activity. As part of the mitotic spindle-associated MMXD CC complex it plays a role in chromosome segregation. Might have a CC role in aging process and could play a causative role in the CC generation of skin cancers (By similarity). {ECO:0000250}. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC -!- COFACTOR: CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420; Evidence={ECO:0000250}; CC -!- COFACTOR: CC Name=[4Fe-4S] cluster; Xref=ChEBI:CHEBI:49883; CC Evidence={ECO:0000250}; CC Note=Binds 1 [4Fe-4S] cluster. {ECO:0000250}; CC -!- SUBUNIT: One of the six subunits forming the core-TFIIH basal CC transcription factor which associates with the CAK complex CC composed of CDK7, CCNH/cyclin H and MNAT1 to form the TFIIH basal CC transcription factor. The interaction with GTF2H2 results in the CC stimulation of the 5'-->3' helicase activity. Component of the CC MMXD complex, which includes CIAO1, ERCC2, FAM96B, MMS19 and CC SLC25A5. Interacts with FAM196B; the interaction is direct (By CC similarity). Interacts with ATF7IP (By similarity). {ECO:0000250}. CC -!- SUBCELLULAR LOCATION: Nucleus. Cytoplasm, cytoskeleton, spindle CC {ECO:0000250}. CC -!- PTM: ISGylated. {ECO:0000250}. CC -!- SIMILARITY: Belongs to the helicase family. RAD3/XPD subfamily. CC {ECO:0000305}. CC -!- SIMILARITY: Contains 1 helicase ATP-binding domain. CC {ECO:0000255|PROSITE-ProRule:PRU00541}. CC -!- SEQUENCE CAUTION: CC Sequence=BAB23443.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305}; CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; U97572; AAB58296.1; -; mRNA. DR EMBL; AK004652; BAB23443.1; ALT_INIT; mRNA. DR EMBL; AK082761; BAC38607.1; -; mRNA. DR EMBL; CH466639; EDL23140.1; -; Genomic_DNA. DR CCDS; CCDS20900.1; -. DR RefSeq; NP_031975.2; NM_007949.4. DR UniGene; Mm.36524; -. DR ProteinModelPortal; O08811; -. DR SMR; O08811; 26-258. DR IntAct; O08811; 1. DR MINT; MINT-4114299; -. DR STRING; 10090.ENSMUSP00000054380; -. DR iPTMnet; O08811; -. DR PhosphoSite; O08811; -. DR EPD; O08811; -. DR MaxQB; O08811; -. DR PaxDb; O08811; -. DR PRIDE; O08811; -. DR Ensembl; ENSMUST00000062831; ENSMUSP00000054380; ENSMUSG00000030400. DR GeneID; 13871; -. DR KEGG; mmu:13871; -. DR UCSC; uc009flq.1; mouse. DR CTD; 2068; -. DR MGI; MGI:95413; Ercc2. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR GeneTree; ENSGT00550000075092; -. DR HOGENOM; HOG000205390; -. DR HOVERGEN; HBG051498; -. DR InParanoid; O08811; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG70W3CM; -. DR TreeFam; TF101232; -. DR Reactome; R-MMU-112382; Formation of RNA Pol II elongation complex. DR Reactome; R-MMU-113418; Formation of the Early Elongation Complex. DR Reactome; R-MMU-5696395; Formation of Incision Complex in GG-NER. DR Reactome; R-MMU-5696400; Dual Incision in GG-NER. DR Reactome; R-MMU-674695; RNA Polymerase II Pre-transcription Events. DR Reactome; R-MMU-6781823; Formation of TC-NER Pre-Incision Complex. DR Reactome; R-MMU-6782135; Dual incision in TC-NER. DR Reactome; R-MMU-6782210; Gap-filling DNA repair synthesis and ligation in TC-NER. DR Reactome; R-MMU-72086; mRNA Capping. DR Reactome; R-MMU-73762; RNA Polymerase I Transcription Initiation. DR Reactome; R-MMU-73772; RNA Polymerase I Promoter Escape. DR Reactome; R-MMU-73776; RNA Polymerase II Promoter Escape. DR Reactome; R-MMU-73777; RNA Polymerase I Chain Elongation. DR Reactome; R-MMU-73779; RNA Polymerase II Transcription Pre-Initiation And Promoter Opening. DR Reactome; R-MMU-73863; RNA Polymerase I Transcription Termination. DR Reactome; R-MMU-75953; RNA Polymerase II Transcription Initiation. DR Reactome; R-MMU-75955; RNA Polymerase II Transcription Elongation. DR Reactome; R-MMU-76042; RNA Polymerase II Transcription Initiation And Promoter Clearance. DR Reactome; R-MMU-77075; RNA Pol II CTD phosphorylation and interaction with CE. DR NextBio; 284788; -. DR PRO; PR:O08811; -. DR Proteomes; UP000000589; Chromosome 7. DR Bgee; O08811; -. DR ExpressionAtlas; O08811; baseline and differential. DR Genevisible; O08811; MM. DR GO; GO:0000439; C:core TFIIH complex; IEA:Ensembl. DR GO; GO:0019907; C:cyclin-dependent protein kinase activating kinase holoenzyme complex; IEA:Ensembl. DR GO; GO:0005737; C:cytoplasm; ISS:UniProtKB. DR GO; GO:0005675; C:holo TFIIH complex; ISS:UniProtKB. DR GO; GO:0071817; C:MMXD complex; ISS:UniProtKB. DR GO; GO:0005634; C:nucleus; IDA:MGI. DR GO; GO:0005819; C:spindle; ISS:UniProtKB. DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW. DR GO; GO:0043139; F:5'-3' DNA helicase activity; ISS:UniProtKB. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW. DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. DR GO; GO:0008022; F:protein C-terminus binding; ISO:MGI. DR GO; GO:0047485; F:protein N-terminus binding; ISO:MGI. DR GO; GO:0008353; F:RNA polymerase II carboxy-terminal domain kinase activity; IEA:Ensembl. DR GO; GO:0007568; P:aging; IMP:MGI. DR GO; GO:0006915; P:apoptotic process; ISS:UniProtKB. DR GO; GO:0030282; P:bone mineralization; IMP:MGI. DR GO; GO:0008283; P:cell proliferation; IMP:MGI. DR GO; GO:0032289; P:central nervous system myelin formation; IMP:MGI. DR GO; GO:0007059; P:chromosome segregation; ISS:UniProtKB. DR GO; GO:0032508; P:DNA duplex unwinding; ISO:MGI. DR GO; GO:0006281; P:DNA repair; IMP:MGI. DR GO; GO:0040016; P:embryonic cleavage; IMP:MGI. DR GO; GO:0043249; P:erythrocyte maturation; IMP:MGI. DR GO; GO:0030198; P:extracellular matrix organization; IMP:MGI. DR GO; GO:0035315; P:hair cell differentiation; IMP:MGI. DR GO; GO:0022405; P:hair cycle process; IMP:MGI. DR GO; GO:0048820; P:hair follicle maturation; IMP:MGI. DR GO; GO:0060218; P:hematopoietic stem cell differentiation; IMP:MGI. DR GO; GO:0001701; P:in utero embryonic development; IMP:MGI. DR GO; GO:0035264; P:multicellular organism growth; IMP:MGI. DR GO; GO:0006289; P:nucleotide-excision repair; IMP:MGI. DR GO; GO:0033683; P:nucleotide-excision repair, DNA incision; ISO:MGI. DR GO; GO:0043388; P:positive regulation of DNA binding; IMP:MGI. DR GO; GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISO:MGI. DR GO; GO:0045893; P:positive regulation of transcription, DNA-templated; ISO:MGI. DR GO; GO:0009791; P:post-embryonic development; IMP:MGI. DR GO; GO:0006468; P:protein phosphorylation; ISO:MGI. DR GO; GO:1901990; P:regulation of mitotic cell cycle phase transition; ISO:MGI. DR GO; GO:0001666; P:response to hypoxia; IEA:Ensembl. DR GO; GO:0006979; P:response to oxidative stress; IMP:MGI. DR GO; GO:0009411; P:response to UV; IMP:MGI. DR GO; GO:0043588; P:skin development; IMP:MGI. DR GO; GO:0021510; P:spinal cord development; IMP:MGI. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB. DR GO; GO:0006283; P:transcription-coupled nucleotide-excision repair; ISS:UniProtKB. DR GO; GO:0009650; P:UV protection; IMP:MGI. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 1: Evidence at protein level; KW 4Fe-4S; ATP-binding; Chromosome partition; Complete proteome; KW Cytoplasm; Cytoskeleton; DNA damage; DNA repair; DNA-binding; KW Helicase; Hydrolase; Iron; Iron-sulfur; Magnesium; Metal-binding; KW Nucleotide-binding; Nucleus; Reference proteome; Transcription; KW Transcription regulation; Ubl conjugation. FT CHAIN 1 760 TFIIH basal transcription factor complex FT helicase XPD subunit. FT /FTId=PRO_0000101981. FT DOMAIN 7 283 Helicase ATP-binding. FT {ECO:0000255|PROSITE-ProRule:PRU00541}. FT NP_BIND 42 49 ATP. {ECO:0000255|PROSITE- FT ProRule:PRU00541}. FT REGION 438 637 Mediates interaction with MMS19. FT {ECO:0000250}. FT MOTIF 234 237 DEAH box. FT METAL 116 116 Iron-sulfur (4Fe-4S). {ECO:0000250}. FT METAL 134 134 Iron-sulfur (4Fe-4S). {ECO:0000250}. FT METAL 155 155 Iron-sulfur (4Fe-4S). {ECO:0000250}. FT METAL 190 190 Iron-sulfur (4Fe-4S). {ECO:0000250}. FT CONFLICT 285 285 Y -> C (in Ref. 2; BAB23443). FT {ECO:0000305}. FT CONFLICT 595 595 I -> V (in Ref. 1; AAB58296). FT {ECO:0000305}. SQ SEQUENCE 760 AA; 86842 MW; 02B2E116792D4E44 CRC64; MKLNVDGLLV YFPYDYIYPE QFSYMLELKR TLDAKGHGVL EMPSGTGKTV SLLALIVAYQ RAYPLEVTKL IYCSRTVPEI EKVIEELRKL LSFYEQQEGE KLPFLGLALS SRKNLCIHPE VTPLRFGKDV DGKCHSLTAS YVRAQYQQDA SLPHCRFYEE FDIHGRQMPL PAGIYNLDDL KALGQRQGWC PYFLARYSIL HANVVVYSYH YLLDPKIADL VSKELARKAV VVFDEAHNID NVCIDSMSVN LTRRTLDRCQ SNLDTLQKTV LRIKETDEQR LRDEYRRLVE GLREASVARE TDAHLANPVL PDEVLQEAVP GSIRTAEHFL GFLRRLLEYV KWRLRVQHVV QESPPAFLSG LAQRVCIQRK PLRFCAERLR SLLHTLEIAD LADFSPLTLL ANFATLVSTY AKGFTIIIEP FDDRTPTIAN PVLHFSCMDA SLAIKPVFER FQSVIITSGT LSPLDIYPKI LDFHPVTMAT FTMTLARVCL CPMIIGRGND QVAISSKFET REDIAVIRNY GNLLLEMSAV VPDGIVAFFT SYQYMESTVA SWYEQGILEN IQRNKLLFIE TQDGAETSVA LEKYQEACEN GRGAILLSVA RGKVSEGIDF VHHYGRAVIM FGVPYVYTQS RILKARLEYL RDQFQIREND FLTFDAMRHA AQCVGRAIRG KTDYGLMVFA DKRFARADKR GKLPRWIQEH LTDSNLNLTV DEGVQVAKYF LRQMAQPFHR EDQLGLSLLS LEQLQSEETL QRIEQIAQQL // ID F0LMY3_THEBM Unreviewed; 642 AA. AC F0LMY3; DT 03-MAY-2011, integrated into UniProtKB/TrEMBL. DT 03-MAY-2011, sequence version 1. DT 11-MAY-2016, entry version 34. DE SubName: Full=DNA repair Rad3-like helicase {ECO:0000313|EMBL:ADT84112.1}; GN OrderedLocusNames=TERMP_01136 {ECO:0000313|EMBL:ADT84112.1}; OS Thermococcus barophilus (strain DSM 11836 / MP). OC Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; OC Thermococcus. OX NCBI_TaxID=391623 {ECO:0000313|EMBL:ADT84112.1, ECO:0000313|Proteomes:UP000007478}; RN [1] {ECO:0000313|EMBL:ADT84112.1, ECO:0000313|Proteomes:UP000007478} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=DSM 11836 / MP {ECO:0000313|Proteomes:UP000007478}; RX PubMed=21217005; DOI=10.1128/JB.01490-10; RA Vannier P., Marteinsson V.T., Fridjonsson O.H., Oger P., Jebbar M.; RT "Complete genome sequence of the hyperthermophilic, piezophilic, RT heterotrophic, and carboxydotrophic archaeon Thermococcus barophilus RT MP."; RL J. Bacteriol. 193:1481-1482(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002372; ADT84112.1; -; Genomic_DNA. DR RefSeq; WP_013467410.1; NC_014804.1. DR STRING; 391623.TERMP_01136; -. DR EnsemblBacteria; ADT84112; ADT84112; TERMP_01136. DR GeneID; 10041453; -. DR KEGG; tba:TERMP_01136; -. DR eggNOG; arCOG00770; Archaea. DR eggNOG; COG1199; LUCA. DR HOGENOM; HOG000223366; -. DR KO; K10844; -. DR OMA; PDWMVET; -. DR BioCyc; TBAR391623:GH3I-1163-MONOMER; -. DR Proteomes; UP000007478; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR014001; Helicase_ATP-bd. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00487; DEXDc; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000313|EMBL:ADT84112.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000007478}; KW Helicase {ECO:0000313|EMBL:ADT84112.1}; KW Hydrolase {ECO:0000313|EMBL:ADT84112.1}; KW Nucleotide-binding {ECO:0000313|EMBL:ADT84112.1}; KW Reference proteome {ECO:0000313|Proteomes:UP000007478}. FT DOMAIN 1 281 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 642 AA; 73943 MW; 16F1C7CACAEE76E3 CRC64; MRDYFPYKSL RPNQEEFISL VDEAVRKGEN LIIEAPTGFG KTISVLAGVL PYALSMGFKV VYLARTHKQM DRVIEELKEI NKINPVSGVE FRSRKELCLH SYIQNFVPDA YNAMIVCKNL KKLHKCDYFE NVKKKKDEFS EIVEYFLNSP SQPIEILSYS NLLELCPYEV TRKVGEKANV IVASYLYMLN PAIRNAFIES LGVDYEDLIV IFDEAHNLPN QAIDVLSDKI TLNSITRAVK EAEEYNEHEI ANFLSIFLKG LENLYNERLK DREVEEIPIL PESIFSHVFD ILNISERLLV RILREIVEVG DAIREDKIEK NKPPRSYVGR VGEFLLNWLS VIGREDYLFI MSKDRGFSLE LVALDPSKAL DFINDIQSAI FMSGTLTPLE AFKDIMGIEN AKLKKFPRMV KKENALVLVA KDVSTRGEER NLELYRKMAE YIVEAVKLIP KNVGVFTASY EVLQGLLSAN VHLRIEEEVG KKVFIEKKNA SSKENDILVR AFKEEAKREG GVLLGVMGGR NSEGQDYSGD EMNGVVLVGI PYARPTPRVQ AQIRYFEKKF PRKGRYYGYY LPAHRKLVQA AGRVHRSAEE KGAIIILDYR VLWSSIRKDL PDWMNETMKP VNLPRMKLYL RRFYRNLEEE KV // ID F0UA18_AJEC8 Unreviewed; 797 AA. AC F0UA18; DT 03-MAY-2011, integrated into UniProtKB/TrEMBL. DT 03-MAY-2011, sequence version 1. DT 11-MAY-2016, entry version 27. DE SubName: Full=DNA repair helicase RAD3 {ECO:0000313|EMBL:EGC43631.1}; GN ORFNames=HCEG_02846 {ECO:0000313|EMBL:EGC43631.1}; OS Ajellomyces capsulatus (strain H88) (Darling's disease fungus) OS (Histoplasma capsulatum). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; OC Eurotiomycetidae; Onygenales; Ajellomycetaceae; Histoplasma. OX NCBI_TaxID=544711 {ECO:0000313|Proteomes:UP000008142}; RN [1] {ECO:0000313|Proteomes:UP000008142} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=H88 {ECO:0000313|Proteomes:UP000008142}; RA Champion M., Cuomo C., Ma L.-J., Henn M.R., Sil A., Goldman B., RA Young S.K., Kodira C.D., Zeng Q., Koehrsen M., Alvarado L., Berlin A., RA Borenstein D., Chen Z., Engels R., Freedman E., Gellesch M., RA Goldberg J., Griggs A., Gujja S., Heiman D., Hepburn T., Howarth C., RA Jen D., Larson L., Lewis B., Mehta T., Park D., Pearson M., RA Roberts A., Saif S., Shea T., Shenoy N., Sisk P., Stolte C., Sykes S., RA Walk T., White J., Yandava C., Klein B., McEwen J.G., Puccia R., RA Goldman G.H., Felipe M.S., Nino-Vega G., San-Blas G., Taylor J., RA Mendoza L., Galagan J., Nusbaum C., Birren B.; RT "Annotation of Ajellomyces capsulatus strain H88."; RL Submitted (JUL-2008) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; DS990637; EGC43631.1; -; Genomic_DNA. DR EnsemblFungi; EGC43631; EGC43631; HCEG_02846. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000008142; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EGC43631.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000008142}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EGC43631.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EGC43631.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EGC43631.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000008142}. FT DOMAIN 7 287 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 248 300 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 797 AA; 91168 MW; D27A38D5F5C544A2 CRC64; MKFFIDDLPV LFPYPRIYPE QYAYMCDLKK TLDAGGHCVL EMPSGTGKTV SLLSLIVAYQ QHQPEQRKLI YCSRTMSEIE KALAELKALM KYRAQQLGFA EDFRGLGLTS RKNLCLHPSV KREKSGAVVD ARCRSLTAGF VKEKKEKGED VELCIYHENL DLLEPSNLVP PGVFTLDDIT KYGEQHKQCP YFSVRRMMPF CKVIIYSYHY LLDPKIAERV SQELSKDSIV VFDEAHNIDN VCIESLSIDL TEDSLRKASR GANNLERKIE EMKRSDAEKL QNEYQKLVEG LREADEARQE EQLMANPALP DDLLKEAVPG NIRRAEHFVA FLKRFIEYLK TRMKITHTIS ETPLSFLAHL KDLTFIERKP LRFCAERLTS LVRTLELVNL EDYQPLQQVA AFATLAATYE KGFLLILEPF ESETATVPNP ILHFTCLDAA IAIKPVFDRF SSVIVTSGTL SPLEMYPKML KFTTVLQESY TMTLARRSFL PMVVTRGSDQ AQISSSFQIR NDPGVVRNYG NLLLEFSRIT PDGVVVFFPS YLYMESIISM WQGMGILDLV WNYKLILVET PDSQESSLAL ETYRTACCNG RGAVLLCVAR GKVSEGIDFD HHYGRAVICI GVPFQYTESR ILKARLEFLR ENYRIRENDF LSFDAMRHAA QCLGRVIRGK DDYGVMVLAD RRFQKRRTQL PKWISQAMLE SETNLSTDMA VATAKSFLKT MAQPFKSKDQ EGISTWSLTD LEYHVKKKRE EEDKRQRGEI ANNQIPSDVV NGNRNGRVTT VDEFDENIDQ ELMMLDA // ID F0VP73_NEOCL Unreviewed; 1080 AA. AC F0VP73; DT 03-MAY-2011, integrated into UniProtKB/TrEMBL. DT 03-MAY-2011, sequence version 1. DT 11-MAY-2016, entry version 26. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CBZ55519.1}; GN ORFNames=NCLIV_059440 {ECO:0000313|EMBL:CBZ55519.1}; OS Neospora caninum (strain Liverpool). OC Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; OC Eucoccidiorida; Eimeriorina; Sarcocystidae; Neospora. OX NCBI_TaxID=572307 {ECO:0000313|EMBL:CBZ55519.1, ECO:0000313|Proteomes:UP000007494}; RN [1] {ECO:0000313|Proteomes:UP000007494} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Liverpool {ECO:0000313|Proteomes:UP000007494}; RX PubMed=22457617; DOI=10.1371/journal.ppat.1002567; RA Reid A.J., Vermont S.J., Cotton J.A., Harris D., Hill-Cawthorne G.A., RA Konen-Waisman S., Latham S.M., Mourier T., Norton R., Quail M.A., RA Sanders M., Shanmugam D., Sohal A., Wasmuth J.D., Brunk B., RA Grigg M.E., Howard J.C., Parkinson J., Roos D.S., Trees A.J., RA Berriman M., Pain A., Wastling J.M.; RT "Comparative genomics of the apicomplexan parasites Toxoplasma gondii RT and Neospora caninum: Coccidia differing in host range and RT transmission strategy."; RL PLoS Pathog. 8:e1002567-e1002567(2012). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FR823392; CBZ55519.1; -; Genomic_DNA. DR RefSeq; XP_003885547.1; XM_003885498.1. DR STRING; 572307.XP_003885547.1; -. DR GeneID; 13440932; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; F0VP73; -. DR Proteomes; UP000007494; Chromosome XI. DR GO; GO:0005634; C:nucleus; IEA:InterPro. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 2. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000007494}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Reference proteome {ECO:0000313|Proteomes:UP000007494}. FT DOMAIN 8 480 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 451 493 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 1080 AA; 119032 MW; C11E40F596FE1851 CRC64; MVVFQIDEVT VYFPYDFIYP EQYAYIRALK QTLDAKGHAV LEMPTGTGKT VALLSLLTSY QLTHPRLGKI LYCTRTVPEM EKALLELKGV IDYRIEEIRK ARERKAREGN GADASAPEEG KAPRRLSESS GNSPAPETQA AGKKRSLADS GMGPALQQGG PRRTDPSEAP YIGKDMASDG YILGVGLSAR RNMCINPAVY NQPDREKIDE ACRQLTAPWV RQSHLTSYNP PPVFAAAGLP SADPPGDAPA VDIENLASEG PRGERSCASA CAGSREEEER RRRREAIASN EEAEPGNYSP SLCAWYENLD RYFAPQFFPA GVYTIEELKV ASANWRHPLL DRKLPFCPYF LARRLLHIAN VVVLNYQYIL DPKVSQAALL TPLPDGISSS HTAGAQSRST YTNPYQNRGL GRGPGTEEVQ YEGSVVVFDE AHNIDNVCIE ALSVNINRSV MEAALRNLSQ LAEKIEEVKK EDAERLREEY ENLVRGLKRR REAEGGEGDT SSSSSSSSSS SSSSSSSSSS SSSSSSSSSS SSSPSSCSSS SSSSSSSSSL SSSSSASAET GKDRRPEEPP VEGGDGKADS ASTLRGQGAD GDQDDPRSAE KQANPGRFAL ANETLDLLAS PLLPEDALLE QAVPGSIRKA EHFIALMRRI VSYLKSYIKI YELKSEGPLS FLHMFEKETH IDASLLKFFY DRLKSLFNTL QITEVESYAP LTLVADFCTL VATYCEGFIL ICDPYPEAVG LYDPLLQLSC LDASLAMQPV LKRFQLLSAS FVFAWRPRPL TPQLPQSLIL TSGTISPLEL YPKLLNFVVG LFCACVLSVF NAWPLWRAFT LSRAPERQDS QFLRGGILTA RHHRVVPDVS GPQLHLSVDC RPRLRSDPSD FQVRIPGKVA EGIDFDRHFG RCVVLFGVPF QYTLSRVLKA RLDFIREQYQ IPDNEFLTFD AMRQAAQCVG RVIRSKNDYG LMIFADARYS RIDKRSKLPP WILKHLDNAH LALNTETAIS VARTFLRHMS QPPPPPSASR LDARQLQQPQ QQQCWELVRR SLHLSGTSSM LPQPKEAGNV TPAGAKTDNE RKEPPIGDGH // ID F0X7X2_GROCL Unreviewed; 793 AA. AC F0X7X2; DT 03-MAY-2011, integrated into UniProtKB/TrEMBL. DT 03-MAY-2011, sequence version 1. DT 11-MAY-2016, entry version 27. DE SubName: Full=Tfiih complex helicase {ECO:0000313|EMBL:EFX06354.1}; GN ORFNames=CMQ_6675 {ECO:0000313|EMBL:EFX06354.1}; OS Grosmannia clavigera (strain kw1407 / UAMH 11150) (Blue stain fungus) OS (Graphiocladiella clavigera). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; OC Sordariomycetes; Sordariomycetidae; Ophiostomatales; Ophiostomataceae; OC Grosmannia. OX NCBI_TaxID=655863 {ECO:0000313|Proteomes:UP000007796}; RN [1] {ECO:0000313|EMBL:EFX06354.1, ECO:0000313|Proteomes:UP000007796} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=kw1407 / UAMH 11150 {ECO:0000313|Proteomes:UP000007796}; RX PubMed=21262841; DOI=10.1073/pnas.1011289108; RA DiGuistini S., Wang Y., Liao N.Y., Taylor G., Tanguay P., Feau N., RA Henrissat B., Chan S.K., Hesse-Orce U., Alamouti S.M., Tsui C.K.M., RA Docking R.T., Levasseur A., Haridas S., Robertson G., Birol I., RA Holt R.A., Marra M.A., Hamelin R.C., Hirst M., Jones S.J.M., RA Bohlmann J., Breuil C.; RT "Genome and transcriptome analyses of the mountain pine beetle-fungal RT symbiont Grosmannia clavigera, a lodgepole pine pathogen."; RL Proc. Natl. Acad. Sci. U.S.A. 108:2504-2509(2011). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GL629729; EFX06354.1; -; Genomic_DNA. DR RefSeq; XP_014175836.1; XM_014320361.1. DR EnsemblFungi; EFX06354; EFX06354; CMQ_6675. DR GeneID; 25980134; -. DR InParanoid; F0X7X2; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000007796; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EFX06354.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000007796}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EFX06354.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EFX06354.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EFX06354.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000007796}. FT DOMAIN 7 282 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 255 300 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 793 AA; 90975 MW; 5E3FFD06206F5A7A CRC64; MKFNIDDLPI LFPYPRIYPV SNSYMCDLKR TLDATGHCVL EMPSGTGKTV SLLSLIVAYQ QYYPGQRKLI YCSRTMSEIE KALAELKALM KYRTQELGYE EEFRGLGLTS RKNLCLHPSV KREKSGSVVD ARCRSLTAGF VIEKKERGED VNVCIYHDNL DKLEPHNLIP NGVWTLDGLL RYGEEHKQCP YFTSRRMMQF CNVIIYSYHY LLDPKIAERV SKELSKDCIV VFDEAHNIDN VCIESLSTDI TEDSLRKATR GAQNLEKKIN EMRETDQKQL ENEYQKLVQG LREADEARQE DAFMTNPTLP EDLLKEAVPG NIRRAEHFVA FLKRFIEYLK TRMKVRQVIS ETPPSFLAHL KEYTFIEKKP LRFCAERLAS LVRTLELTNI EDYQPLREVA TFATLVATYE KGFLLILEPF ESDTAEVPNP VLHFTCLDAA IAIKPVFERF SSVIITSGTI SPLEMYPKML GFNTVVQESY TMTLARRSFL PMIVTRGSDQ AAMSTSFQVR NEPSVVRNYG TLLTEFAKIT PDGLVVFFPS YLYMESIISM WQGMGILDEV WKYKLILVET PDAQETSLAL ETYRTACCNG RGAILLCVAR GKVSEGIDFD HQYGRTVLSM GVPFQYTESR ILKARLEFLR ETYRIRENDF LSFDAMRHAA QCLGRVLRGK DDYGIMVLAD RRYQKKRNQL PKWINQALLE ADANLSTDMA VSNAKKFLRD MAQPFHARDQ EGISTWSLRD LRKHQEQADH DRIAELQQQI NGAGLARYAA AEPVAENYDD REMDAAMMDL DEA // ID F0XVJ1_AURAN Unreviewed; 760 AA. AC F0XVJ1; DT 03-MAY-2011, integrated into UniProtKB/TrEMBL. DT 03-MAY-2011, sequence version 1. DT 11-MAY-2016, entry version 25. DE SubName: Full=Putative uncharacterized protein {ECO:0000313|EMBL:EGB12609.1}; GN ORFNames=AURANDRAFT_51952 {ECO:0000313|EMBL:EGB12609.1}; OS Aureococcus anophagefferens (Harmful bloom alga). OC Eukaryota; Stramenopiles; Pelagophyceae; Pelagomonadales; Aureococcus. OX NCBI_TaxID=44056 {ECO:0000313|Proteomes:UP000002729}; RN [1] {ECO:0000313|EMBL:EGB12609.1, ECO:0000313|Proteomes:UP000002729} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=CCMP 1984 {ECO:0000313|Proteomes:UP000002729}; RX PubMed=21368207; DOI=10.1073/pnas.1016106108; RA Gobler C.J., Berry D.L., Dyhrman S.T., Wilhelm S.W., Salamov A., RA Lobanov A.V., Zhang Y., Collier J.L., Wurch L.L., Kustka A.B., RA Dill B.D., Shah M., VerBerkmoes N.C., Kuo A., Terry A., Pangilinan J., RA Lindquist E.A., Lucas S., Paulsen I.T., Hattenrath-Lehmann T.K., RA Talmage S.C., Walker E.A., Koch F., Burson A.M., Marcoval M.A., RA Tang Y.Z., Lecleir G.R., Coyne K.J., Berg G.M., Bertrand E.M., RA Saito M.A., Gladyshev V.N., Grigoriev I.V.; RT "Niche of harmful alga Aureococcus anophagefferens revealed through RT ecogenomics."; RL Proc. Natl. Acad. Sci. U.S.A. 108:4352-4357(2011). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GL833120; EGB12609.1; -; Genomic_DNA. DR RefSeq; XP_009032272.1; XM_009034024.1. DR EnsemblProtists; EGB12609; EGB12609; AURANDRAFT_51952. DR GeneID; 20222135; -. DR KEGG; aaf:AURANDRAFT_51952; -. DR InParanoid; F0XVJ1; -. DR KO; K10844; -. DR Proteomes; UP000002729; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000002729}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000002729}. FT DOMAIN 7 283 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 760 AA; 84464 MW; 0F744F28F01456B7 CRC64; MRFQLDELDV FFPYDALYPE QFTYICELKK ALDAEGHALL EMPTGTGKTA CLLTLITAYQ YAHPEMGKLI YCTRTVPEME KCLAELKRLR AYRDAQRGVG ASKAPFLALC LSSRRNMCVH ERVVRDADRD RVDVECRKMT ASWARSRDDA EKCPFFEAWD EAGTEAEVPD GVYDVDDLRV LGKAKGWCPY FLARHAIAHA NVIVYNYQYM LDPKVAGLVS RELEAESVVV FDEGHNIDNI CIEALSVELD ARRLDQAQRC VARLARSVDA LRASDAGRVR AEYDRLVSGL RAAGSLPGDE LGGASPVLPQ DVLDEAVPGN VRKAEHFLRL LRVLVLHLKK KLAGTRVAVE SPAAFLLGLQ QATGLDAKPL KFFHTRLHQL LRTVEAAGLE DSAALGDVAN FASIVSTYDD GFSVVADPTS RGPSGLPQAR LDLACLDASL AIKPVLERFR SVVITSGTLS PLELYPKLLN FSPVVRESLQ MSIFRPCILP LVVTKGADQQ PVSTRFESRD DASVVRNFGQ LLAGLCGDVP DGMVVFFPSY SYMERTVTTW DELGVLRKVA EHKLLFVETK DVVETTIALD NFRRACDTGR GAVFLSIARG KVAEGIDFDR HYGRCVLNVG VPFQYTQSPV LRTRLEYLLS KFAIREADFL SFDALRQTAQ CVGRVIRSKT DYGIVILADA RFARHDKRSK LPGWVQQFMT DANLNLSSDA ALAITRTFLK QMAQPIDDRD LRQMLLDDRK LGAMLKDRDA RAPADDAAPD // ID F0ZZ26_DICPU Unreviewed; 788 AA. AC F0ZZ26; DT 03-MAY-2011, integrated into UniProtKB/TrEMBL. DT 03-MAY-2011, sequence version 1. DT 11-MAY-2016, entry version 31. DE SubName: Full=Putative uncharacterized protein {ECO:0000313|EMBL:EGC30807.1}; GN ORFNames=DICPUDRAFT_50564 {ECO:0000313|EMBL:EGC30807.1}; OS Dictyostelium purpureum (Slime mold). OC Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Dictyostelium. OX NCBI_TaxID=5786 {ECO:0000313|Proteomes:UP000001064}; RN [1] {ECO:0000313|Proteomes:UP000001064} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=QSDP1 {ECO:0000313|Proteomes:UP000001064}; RX PubMed=21356102; DOI=10.1186/gb-2011-12-2-r20; RG US DOE Joint Genome Institute (JGI-PGF); RA Sucgang R., Kuo A., Tian X., Salerno W., Parikh A., Feasley C.L., RA Dalin E., Tu H., Huang E., Barry K., Lindquist E., Shapiro H., RA Bruce D., Schmutz J., Salamov A., Fey P., Gaudet P., Anjard C., RA Babu M.M., Basu S., Bushmanova Y., van der Wel H., Katoh-Kurasawa M., RA Dinh C., Coutinho P.M., Saito T., Elias M., Schaap P., Kay R.R., RA Henrissat B., Eichinger L., Rivero F., Putnam N.H., West C.M., RA Loomis W.F., Chisholm R.L., Shaulsky G., Strassmann J.E., RA Queller D.C., Kuspa A., Grigoriev I.V.; RT "Comparative genomics of the social amoebae Dictyostelium discoideum RT and Dictyostelium purpureum."; RL Genome Biol. 12:R20.1-R20.23(2011). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GL871299; EGC30807.1; -; Genomic_DNA. DR RefSeq; XP_003292674.1; XM_003292626.1. DR STRING; 5786.XP_003292674.1; -. DR EnsemblProtists; EGC30807; EGC30807; DICPUDRAFT_50564. DR GeneID; 10508625; -. DR KEGG; dpp:DICPUDRAFT_50564; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; F0ZZ26; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR Proteomes; UP000001064; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000001064}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000001064}. FT DOMAIN 7 277 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 788 AA; 89742 MW; E14B720644079F44 CRC64; MKFFIDDLAV YFPYHYCYPE QYQYMVSLKK SLDEGGPCIL EMPSGTGKTV SLLALISSYQ LVNPTVKLLY CSRTVPEIEQ ATEEARRVLN YRNSQLGEKA PKTLCISMSS RRNLCIHPRV SEEREGKIVD SLCRELTSPW NRENPNSERC KFFENFEDKG KEILLEGVYS LEDLKEYGLK NQMCPYFLDR HVLNFANIVI FSYQYLLDPK IASLVSSSFA TNSIVVFDEA HNIDNVCINA LSVNLDNKIL DASLKNVTKI NKQIEEIKKV DEKRLKEEYS RLVQGLARSG TNRTEEVSAD PVLPNDVIQE AVPGNIRKAE HFMSLIKRVI DYLKSRLKSQ MVISESPMAF LQGLYHATSI TSRTLRFCSA RLSSLLRTLK INDINAFSGI SLIADFATLV GTYNNGFLII IEPYYQRQNN TYDQIFQFCC LDASIGMKPI FDRFRSVIIT SGTLSPLDIY TKMLNFRPKV IEKLSMSLNR NCICPCILTR GSDQISISTK FDVRSDTAVV RNYGSLLVEV SAIVPDGIIC FFTSYSYMEQ IVSVWNEMGL LNNILTNKLI FVETSDPAES ALALQNYKKA CDSGRGAVLL SVARGKISEG IDFDNQYGRC VILYGIPYIN TESKVLRARL EFLRDRYQIR ENEFLTFDAM RTASQCVGRV IRGKSDYGIM IFADKRYNRL DKRNKLPQWI LQFCQNQHLN LSTDMAISLS KQFLREMGQP FTREEQLGKS LWSIEHIEMQ PASKPKNHLN GKNTQQDIQN ITTTTTTIAT TTTSATITTD DTDTVMNE // ID F1N2P3_BOVIN Unreviewed; 759 AA. AC F1N2P3; DT 03-MAY-2011, integrated into UniProtKB/TrEMBL. DT 16-NOV-2011, sequence version 2. DT 11-MAY-2016, entry version 43. DE SubName: Full=TFIIH basal transcription factor complex helicase XPD subunit {ECO:0000313|Ensembl:ENSBTAP00000002680}; GN Name=ERCC2 {ECO:0000313|Ensembl:ENSBTAP00000002680}; OS Bos taurus (Bovine). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; OC Pecora; Bovidae; Bovinae; Bos. OX NCBI_TaxID=9913 {ECO:0000313|Ensembl:ENSBTAP00000002680, ECO:0000313|Proteomes:UP000009136}; RN [1] {ECO:0000313|Ensembl:ENSBTAP00000002680, ECO:0000313|Proteomes:UP000009136} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Hereford {ECO:0000313|Ensembl:ENSBTAP00000002680, RC ECO:0000313|Proteomes:UP000009136}; RX PubMed=19393038; DOI=10.1186/gb-2009-10-4-r42; RA Zimin A.V., Delcher A.L., Florea L., Kelley D.R., Schatz M.C., RA Puiu D., Hanrahan F., Pertea G., Van Tassell C.P., Sonstegard T.S., RA Marcais G., Roberts M., Subramanian P., Yorke J.A., Salzberg S.L.; RT "A whole-genome assembly of the domestic cow, Bos taurus."; RL Genome Biol. 10:R42.01-R42.10(2009). RN [2] {ECO:0000313|Ensembl:ENSBTAP00000002680} RP IDENTIFICATION. RC STRAIN=Hereford {ECO:0000313|Ensembl:ENSBTAP00000002680}; RG Ensembl; RL Submitted (MAR-2016) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an Ensembl CC automatic analysis pipeline and should be considered as CC preliminary data. {ECO:0000313|Ensembl:ENSBTAP00000002680}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; DAAA02047375; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR STRING; 9913.ENSBTAP00000002680; -. DR PaxDb; F1N2P3; -. DR Ensembl; ENSBTAT00000002680; ENSBTAP00000002680; ENSBTAG00000002072. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR GeneTree; ENSGT00550000075092; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG70W3CM; -. DR TreeFam; TF101232; -. DR Reactome; R-BTA-112382; Formation of RNA Pol II elongation complex. DR Reactome; R-BTA-5696395; Formation of Incision Complex in GG-NER. DR Reactome; R-BTA-5696400; Dual Incision in GG-NER. DR Reactome; R-BTA-674695; RNA Polymerase II Pre-transcription Events. DR Reactome; R-BTA-6781823; Formation of TC-NER Pre-Incision Complex. DR Reactome; R-BTA-6782135; Dual incision in TC-NER. DR Reactome; R-BTA-6782210; Gap-filling DNA repair synthesis and ligation in TC-NER. DR Reactome; R-BTA-72086; mRNA Capping. DR Reactome; R-BTA-73762; RNA Polymerase I Transcription Initiation. DR Reactome; R-BTA-73772; RNA Polymerase I Promoter Escape. DR Reactome; R-BTA-73776; RNA Polymerase II Promoter Escape. DR Reactome; R-BTA-73777; RNA Polymerase I Chain Elongation. DR Reactome; R-BTA-73779; RNA Polymerase II Transcription Pre-Initiation And Promoter Opening. DR Reactome; R-BTA-73863; RNA Polymerase I Transcription Termination. DR Reactome; R-BTA-75953; RNA Polymerase II Transcription Initiation. DR Reactome; R-BTA-75955; RNA Polymerase II Transcription Elongation. DR Reactome; R-BTA-76042; RNA Polymerase II Transcription Initiation And Promoter Clearance. DR Reactome; R-BTA-77075; RNA Pol II CTD phosphorylation and interaction with CE. DR Proteomes; UP000009136; Chromosome 18. DR GO; GO:0019907; C:cyclin-dependent protein kinase activating kinase holoenzyme complex; IEA:Ensembl. DR GO; GO:0005737; C:cytoplasm; IEA:Ensembl. DR GO; GO:0005675; C:holo TFIIH complex; IEA:Ensembl. DR GO; GO:0071817; C:MMXD complex; IEA:Ensembl. DR GO; GO:0043139; F:5'-3' DNA helicase activity; IEA:Ensembl. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0008353; F:RNA polymerase II carboxy-terminal domain kinase activity; IEA:Ensembl. DR GO; GO:0007568; P:aging; IEA:Ensembl. DR GO; GO:0006915; P:apoptotic process; IEA:Ensembl. DR GO; GO:0030282; P:bone mineralization; IEA:Ensembl. DR GO; GO:0008283; P:cell proliferation; IEA:Ensembl. DR GO; GO:0032289; P:central nervous system myelin formation; IEA:Ensembl. DR GO; GO:0007059; P:chromosome segregation; IEA:Ensembl. DR GO; GO:0040016; P:embryonic cleavage; IEA:Ensembl. DR GO; GO:0043249; P:erythrocyte maturation; IEA:Ensembl. DR GO; GO:0030198; P:extracellular matrix organization; IEA:Ensembl. DR GO; GO:0035315; P:hair cell differentiation; IEA:Ensembl. DR GO; GO:0048820; P:hair follicle maturation; IEA:Ensembl. DR GO; GO:0060218; P:hematopoietic stem cell differentiation; IEA:Ensembl. DR GO; GO:0001701; P:in utero embryonic development; IEA:Ensembl. DR GO; GO:0035264; P:multicellular organism growth; IEA:Ensembl. DR GO; GO:0033683; P:nucleotide-excision repair, DNA incision; IEA:Ensembl. DR GO; GO:0043388; P:positive regulation of DNA binding; IEA:Ensembl. DR GO; GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IEA:Ensembl. DR GO; GO:0009791; P:post-embryonic development; IEA:Ensembl. DR GO; GO:1901990; P:regulation of mitotic cell cycle phase transition; IEA:Ensembl. DR GO; GO:0006979; P:response to oxidative stress; IEA:Ensembl. DR GO; GO:0021510; P:spinal cord development; IEA:Ensembl. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:Ensembl. DR GO; GO:0006283; P:transcription-coupled nucleotide-excision repair; IEA:Ensembl. DR GO; GO:0009650; P:UV protection; IEA:Ensembl. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000009136}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000009136}. FT DOMAIN 6 282 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 248 275 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 759 AA; 86896 MW; 6E2EB8F06F48AA1B CRC64; RLNVDGLLVY FPYDYIYPEQ FSYMLELKRT LDAKGHGVLE MPSGTGKTVS LLALIMAYQR AYPLEVTKLI YCSRTVPEIE KVIEELRKLL SFYEKQEGEK LPFLGLALSS RKNLCIHPEV TPLRFGKDVD GKCHSLTASY VRAQYQRDSS LPHCRFYEEF DVHGRQVPLP TGIYNLDDLK AVGRRQGWCP YFLARYSILH ANVVVYSYHY LLDPKIADLV SKELARKAVV VFDEAHNIDN VCIDSMSVNL TRRTLDRCQA NLETLQKTVL RIKETDEQRL REEYRRLVEG LREASAARET DAHLANPVLP DEVLKEAVPG SIRTAEHFLG FLRRLLEYVK WRLRVQHVVQ ESPPAFLSGL AQRVCIQRKP LRFCAERLRS LLYTLEISDL TDFSPLTLLA NFATLVSTYA KGFTIIIEPF DDRTPTIANP ILHFSCMDAS LAIKPVFERF QSVIITSGTL SPLDIYPKIL DFHPVTMATF TMTLARVCLC PMIIGRGNDQ VAISSKFETR EDIAVIRNYG NLLLEMSAVV PDGIVAFFTS YQYMESTVAS WYEQGILENI QRNKLLFIET QDGAETSVAL EKYQEACENG RGAILLSVAR GKVSEGIDFV HHYGRAVIMF GVPYVYTQSR ILKARLEYLR DQFQIRENDF LTFDAMRHAA QCVGRAIRGK TDYGLMVFAD KRFARADKRG KLPRWIQEHL TDANLNLTVD EGVQVAKYFL RQMAQPFHRE DQLGLSLLSL EQLESEETLR RIEQIAQQL // ID F1PMH9_CANLF Unreviewed; 771 AA. AC F1PMH9; DT 03-MAY-2011, integrated into UniProtKB/TrEMBL. DT 31-OCT-2012, sequence version 2. DT 11-MAY-2016, entry version 39. DE SubName: Full=Uncharacterized protein {ECO:0000313|Ensembl:ENSCAFP00000006714}; GN Name=ERCC2 {ECO:0000313|Ensembl:ENSCAFP00000006714}; OS Canis lupus familiaris (Dog) (Canis familiaris). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; OC Canis. OX NCBI_TaxID=9615 {ECO:0000313|Ensembl:ENSCAFP00000006714, ECO:0000313|Proteomes:UP000002254}; RN [1] {ECO:0000313|Ensembl:ENSCAFP00000006714, ECO:0000313|Proteomes:UP000002254} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Boxer {ECO:0000313|Ensembl:ENSCAFP00000006714, RC ECO:0000313|Proteomes:UP000002254}; RX PubMed=16341006; DOI=10.1038/nature04338; RG Broad Sequencing Platform; RA Lindblad-Toh K., Wade C.M., Mikkelsen T.S., Karlsson E.K., Jaffe D.B., RA Kamal M., Clamp M., Chang J.L., Kulbokas E.J. III, Zody M.C., RA Mauceli E., Xie X., Breen M., Wayne R.K., Ostrander E.A., RA Ponting C.P., Galibert F., Smith D.R., deJong P.J., Kirkness E.F., RA Alvarez P., Biagi T., Brockman W., Butler J., Chin C.-W., Cook A., RA Cuff J., Daly M.J., DeCaprio D., Gnerre S., Grabherr M., Kellis M., RA Kleber M., Bardeleben C., Goodstadt L., Heger A., Hitte C., Kim L., RA Koepfli K.-P., Parker H.G., Pollinger J.P., Searle S.M.J., RA Sutter N.B., Thomas R., Webber C., Baldwin J., Abebe A., RA Abouelleil A., Aftuck L., Ait-Zahra M., Aldredge T., Allen N., An P., RA Anderson S., Antoine C., Arachchi H., Aslam A., Ayotte L., RA Bachantsang P., Barry A., Bayul T., Benamara M., Berlin A., RA Bessette D., Blitshteyn B., Bloom T., Blye J., Boguslavskiy L., RA Bonnet C., Boukhgalter B., Brown A., Cahill P., Calixte N., RA Camarata J., Cheshatsang Y., Chu J., Citroen M., Collymore A., RA Cooke P., Dawoe T., Daza R., Decktor K., DeGray S., Dhargay N., RA Dooley K., Dooley K., Dorje P., Dorjee K., Dorris L., Duffey N., RA Dupes A., Egbiremolen O., Elong R., Falk J., Farina A., Faro S., RA Ferguson D., Ferreira P., Fisher S., FitzGerald M., Foley K., RA Foley C., Franke A., Friedrich D., Gage D., Garber M., Gearin G., RA Giannoukos G., Goode T., Goyette A., Graham J., Grandbois E., RA Gyaltsen K., Hafez N., Hagopian D., Hagos B., Hall J., Healy C., RA Hegarty R., Honan T., Horn A., Houde N., Hughes L., Hunnicutt L., RA Husby M., Jester B., Jones C., Kamat A., Kanga B., Kells C., RA Khazanovich D., Kieu A.C., Kisner P., Kumar M., Lance K., Landers T., RA Lara M., Lee W., Leger J.-P., Lennon N., Leuper L., LeVine S., Liu J., RA Liu X., Lokyitsang Y., Lokyitsang T., Lui A., Macdonald J., Major J., RA Marabella R., Maru K., Matthews C., McDonough S., Mehta T., RA Meldrim J., Melnikov A., Meneus L., Mihalev A., Mihova T., Miller K., RA Mittelman R., Mlenga V., Mulrain L., Munson G., Navidi A., Naylor J., RA Nguyen T., Nguyen N., Nguyen C., Nguyen T., Nicol R., Norbu N., RA Norbu C., Novod N., Nyima T., Olandt P., O'Neill B., O'Neill K., RA Osman S., Oyono L., Patti C., Perrin D., Phunkhang P., Pierre F., RA Priest M., Rachupka A., Raghuraman S., Rameau R., Ray V., Raymond C., RA Rege F., Rise C., Rogers J., Rogov P., Sahalie J., Settipalli S., RA Sharpe T., Shea T., Sheehan M., Sherpa N., Shi J., Shih D., Sloan J., RA Smith C., Sparrow T., Stalker J., Stange-Thomann N., Stavropoulos S., RA Stone C., Stone S., Sykes S., Tchuinga P., Tenzing P., Tesfaye S., RA Thoulutsang D., Thoulutsang Y., Topham K., Topping I., Tsamla T., RA Vassiliev H., Venkataraman V., Vo A., Wangchuk T., Wangdi T., RA Weiand M., Wilkinson J., Wilson A., Yadav S., Yang S., Yang X., RA Young G., Yu Q., Zainoun J., Zembek L., Zimmer A., Lander E.S.; RT "Genome sequence, comparative analysis and haplotype structure of the RT domestic dog."; RL Nature 438:803-819(2005). RN [2] {ECO:0000313|Ensembl:ENSCAFP00000006714} RP IDENTIFICATION. RC STRAIN=Boxer {ECO:0000313|Ensembl:ENSCAFP00000006714}; RG Ensembl; RL Submitted (JUL-2011) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an Ensembl CC automatic analysis pipeline and should be considered as CC preliminary data. {ECO:0000313|Ensembl:ENSCAFP00000006714}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AAEX03000876; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR STRING; 9615.ENSCAFP00000006714; -. DR PaxDb; F1PMH9; -. DR Ensembl; ENSCAFT00000007249; ENSCAFP00000006714; ENSCAFG00000004487. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR GeneTree; ENSGT00550000075092; -. DR InParanoid; F1PMH9; -. DR OMA; DEVWKYK; -. DR TreeFam; TF101232; -. DR Reactome; R-CFA-112382; Formation of RNA Pol II elongation complex. DR Reactome; R-CFA-113418; Formation of the Early Elongation Complex. DR Reactome; R-CFA-5696395; Formation of Incision Complex in GG-NER. DR Reactome; R-CFA-5696400; Dual Incision in GG-NER. DR Reactome; R-CFA-674695; RNA Polymerase II Pre-transcription Events. DR Reactome; R-CFA-6781823; Formation of TC-NER Pre-Incision Complex. DR Reactome; R-CFA-6782135; Dual incision in TC-NER. DR Reactome; R-CFA-6782210; Gap-filling DNA repair synthesis and ligation in TC-NER. DR Reactome; R-CFA-72086; mRNA Capping. DR Reactome; R-CFA-73762; RNA Polymerase I Transcription Initiation. DR Reactome; R-CFA-73772; RNA Polymerase I Promoter Escape. DR Reactome; R-CFA-73776; RNA Polymerase II Promoter Escape. DR Reactome; R-CFA-73777; RNA Polymerase I Chain Elongation. DR Reactome; R-CFA-73779; RNA Polymerase II Transcription Pre-Initiation And Promoter Opening. DR Reactome; R-CFA-73863; RNA Polymerase I Transcription Termination. DR Reactome; R-CFA-75953; RNA Polymerase II Transcription Initiation. DR Reactome; R-CFA-75955; RNA Polymerase II Transcription Elongation. DR Reactome; R-CFA-76042; RNA Polymerase II Transcription Initiation And Promoter Clearance. DR Reactome; R-CFA-77075; RNA Pol II CTD phosphorylation and interaction with CE. DR Proteomes; UP000002254; Chromosome 1. DR GO; GO:0019907; C:cyclin-dependent protein kinase activating kinase holoenzyme complex; IEA:Ensembl. DR GO; GO:0005737; C:cytoplasm; IEA:Ensembl. DR GO; GO:0005675; C:holo TFIIH complex; IEA:Ensembl. DR GO; GO:0071817; C:MMXD complex; IEA:Ensembl. DR GO; GO:0043139; F:5'-3' DNA helicase activity; IEA:Ensembl. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0008353; F:RNA polymerase II carboxy-terminal domain kinase activity; IEA:Ensembl. DR GO; GO:0007568; P:aging; IEA:Ensembl. DR GO; GO:0006915; P:apoptotic process; IEA:Ensembl. DR GO; GO:0030282; P:bone mineralization; IEA:Ensembl. DR GO; GO:0008283; P:cell proliferation; IEA:Ensembl. DR GO; GO:0032289; P:central nervous system myelin formation; IEA:Ensembl. DR GO; GO:0007059; P:chromosome segregation; IEA:Ensembl. DR GO; GO:0040016; P:embryonic cleavage; IEA:Ensembl. DR GO; GO:0043249; P:erythrocyte maturation; IEA:Ensembl. DR GO; GO:0030198; P:extracellular matrix organization; IEA:Ensembl. DR GO; GO:0035315; P:hair cell differentiation; IEA:Ensembl. DR GO; GO:0048820; P:hair follicle maturation; IEA:Ensembl. DR GO; GO:0060218; P:hematopoietic stem cell differentiation; IEA:Ensembl. DR GO; GO:0001701; P:in utero embryonic development; IEA:Ensembl. DR GO; GO:0035264; P:multicellular organism growth; IEA:Ensembl. DR GO; GO:0033683; P:nucleotide-excision repair, DNA incision; IEA:Ensembl. DR GO; GO:0043388; P:positive regulation of DNA binding; IEA:Ensembl. DR GO; GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IEA:Ensembl. DR GO; GO:0009791; P:post-embryonic development; IEA:Ensembl. DR GO; GO:1901990; P:regulation of mitotic cell cycle phase transition; IEA:Ensembl. DR GO; GO:0006979; P:response to oxidative stress; IEA:Ensembl. DR GO; GO:0021510; P:spinal cord development; IEA:Ensembl. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:Ensembl. DR GO; GO:0006283; P:transcription-coupled nucleotide-excision repair; IEA:Ensembl. DR GO; GO:0009650; P:UV protection; IEA:Ensembl. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 2. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000002254}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000002254}. FT DOMAIN 19 295 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 89 112 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 771 AA; 87456 MW; 2F264BCDD99B13F0 CRC64; AAGRGTDPAA PAARLNVDGL LVYFPYDYIY PEQFSYMLEL KRTLDAKGHG VLEMPSGTGK TVSLLALIMA YQRAYPLEVT KLIYCSRTVP EIEKVIEELR KLLNFYEKQE GEKLPFLGLA LSSRKNLCIH PEVMPLRFGK DVDGKCHSLT ASYVRAQYQQ DSSLPHCRFY EEFDVHGRQV PLPAGIYNLD DLKALGQRQG WCPYFLARYS ILHANVVVYS YHYLLDPKIA ELVSKELARK AVVVFDEAHN IDNVCIDSMS VNITRRTLDR CQGNLETLQK TVLRIKETDE QRLREEYRRL VEGLREASAA RETDAHLANP VLPDEVLQEA VPGSIRTAEH FLGFLRRLLE YVKWRLRVQH VVQESPPAFL SGLAQRVCIQ RKPLRFCAER LRSLLHTLEI ADLADFSPLT LLANFATLVS TYAKGFTIII EPFDDRTPTI ANPILHFSCM DASLAIKPVF ERFQSVIITS GTLSPLDIYP KILDFHPVTM ATFTMTLARV CLCPMIIGRG NDQVAISSKF ETREDIAVIR NYGNLLLEMS AVVPDGIVAF FTSYQYMEST VASWYEQGIL ENIQRNKLLF IETQDGAETS VALEKYQEAC ENGRGAILLS VARGKVSEGI DFVHHYGRAV IMFGVPYVYT QSRILKARLE YLRDQFQIRN DFLTLDAMRH AAQCVGGAIR GKTDYGLMVF ADKRFARADK RGKLPRWIQE HLTDANLNLT VDEGVQVAKY FLRQMAQPFH RLPRLSSSFS SNPSLPSTGT LRRIEQIAQQ L // ID F1Q5E7_DANRE Unreviewed; 760 AA. AC F1Q5E7; DT 03-MAY-2011, integrated into UniProtKB/TrEMBL. DT 03-MAY-2011, sequence version 1. DT 11-MAY-2016, entry version 41. DE SubName: Full=Ercc2 {ECO:0000313|EMBL:AEO89688.1}; DE SubName: Full=Uncharacterized protein {ECO:0000313|Ensembl:ENSDARP00000114026}; GN Name=ercc2 {ECO:0000313|EMBL:AEO89688.1, GN ECO:0000313|Ensembl:ENSDARP00000114026, GN ECO:0000313|ZFIN:ZDB-GENE-040426-997}; OS Danio rerio (Zebrafish) (Brachydanio rerio). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; OC Cyprinidae; Danio. OX NCBI_TaxID=7955 {ECO:0000313|Ensembl:ENSDARP00000114026, ECO:0000313|Proteomes:UP000000437}; RN [1] {ECO:0000313|EMBL:AEO89688.1} RP NUCLEOTIDE SEQUENCE. RA Silva I.A.L., Conceicao N., Cancela M.L.; RL Submitted (JUN-2011) to the EMBL/GenBank/DDBJ databases. RN [2] {ECO:0000313|Ensembl:ENSDARP00000114026} RP IDENTIFICATION. RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000114026}; RG Ensembl; RL Submitted (JUL-2011) to UniProtKB. RN [3] {ECO:0000313|EMBL:AEO89688.1} RP NUCLEOTIDE SEQUENCE. RX PubMed=22187342; DOI=10.1007/s11033-011-1333-x; RA Silva I.A., Cancela M.L., Conceicao N.; RT "Molecular cloning and expression analysis of xpd from zebrafish RT (Danio rerio)."; RL Mol. Biol. Rep. 39:5339-5348(2012). RN [4] {ECO:0000313|Ensembl:ENSDARP00000114026, ECO:0000313|Proteomes:UP000000437} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000114026, RC ECO:0000313|Proteomes:UP000000437}; RX PubMed=23594743; DOI=10.1038/nature12111; RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., RA Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L., RA McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C., RA Koch R., Rauch G.J., White S., Chow W., Kilian B., Quintais L.T., RA Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T., RA Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F., RA Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H., RA Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M., RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J., RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G., RA Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P., RA Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., RA Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P., RA Barker N., Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G., RA Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D., RA Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., RA Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C., RA Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J., RA Murnane C., Gray E., Humphries M., Sycamore N., Barker D., RA Saunders D., Wallis J., Babbage A., Hammond S., RA Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A., RA Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J., RA Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E., RA Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., RA Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., RA Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., RA Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C., RA Raddatz G., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., RA Yang F., Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J., RA Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C., RA Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H., RA Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J., RA Stemple D.L.; RT "The zebrafish reference genome sequence and its relationship to the RT human genome."; RL Nature 496:498-503(2013). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CR855332; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; JN172105; AEO89688.1; -; mRNA. DR RefSeq; NP_957220.2; NM_200926.2. DR UniGene; Dr.5152; -. DR STRING; 7955.ENSDARP00000114026; -. DR Ensembl; ENSDART00000141618; ENSDARP00000114026; ENSDARG00000021985. DR GeneID; 393900; -. DR KEGG; dre:393900; -. DR CTD; 2068; -. DR ZFIN; ZDB-GENE-040426-997; ercc2. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR GeneTree; ENSGT00550000075092; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG70W3CM; -. DR TreeFam; TF101232; -. DR Reactome; R-DRE-112382; Formation of RNA Pol II elongation complex. DR Reactome; R-DRE-113418; Formation of the Early Elongation Complex. DR Reactome; R-DRE-5696395; Formation of Incision Complex in GG-NER. DR Reactome; R-DRE-5696400; Dual Incision in GG-NER. DR Reactome; R-DRE-674695; RNA Polymerase II Pre-transcription Events. DR Reactome; R-DRE-6781823; Formation of TC-NER Pre-Incision Complex. DR Reactome; R-DRE-6782135; Dual incision in TC-NER. DR Reactome; R-DRE-6782210; Gap-filling DNA repair synthesis and ligation in TC-NER. DR Reactome; R-DRE-72086; mRNA Capping. DR Reactome; R-DRE-73762; RNA Polymerase I Transcription Initiation. DR Reactome; R-DRE-73772; RNA Polymerase I Promoter Escape. DR Reactome; R-DRE-73776; RNA Polymerase II Promoter Escape. DR Reactome; R-DRE-73777; RNA Polymerase I Chain Elongation. DR Reactome; R-DRE-73779; RNA Polymerase II Transcription Pre-Initiation And Promoter Opening. DR Reactome; R-DRE-73863; RNA Polymerase I Transcription Termination. DR Reactome; R-DRE-75953; RNA Polymerase II Transcription Initiation. DR Reactome; R-DRE-75955; RNA Polymerase II Transcription Elongation. DR Reactome; R-DRE-76042; RNA Polymerase II Transcription Initiation And Promoter Clearance. DR Reactome; R-DRE-77075; RNA Pol II CTD phosphorylation and interaction with CE. DR Proteomes; UP000000437; Chromosome 15. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 1: Evidence at protein level; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000000437}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Proteomics identification {ECO:0000213|PeptideAtlas:F1Q5E7}; KW Reference proteome {ECO:0000313|Proteomes:UP000000437}. FT DOMAIN 7 285 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 760 AA; 87061 MW; 4FE1FB2396E774AA CRC64; MKLNIDGLLV YFPYDYIYPE QYSYMLELKR TLDAKGHGVL EMPSGTGKTI SLLSLIVAYQ KTYPLEVTKL VYCSRTVPEI EKVVEELRKL MDYYSKQTGV KNDFLALALS SRKNLCIHPE VSSLRFGKEV DGKCHSLTAS YIRAQHQSNP NQPVCQFYEE FDNVGRQVPI PPGIYNLDDL KDFGRRKGWC PYFLARYALL HANIVVYSYH YLLDPKIADL VSKELAKKSV VVFDEAHNID NVCIDSMSVN ITRRTLDRCQ TNVETLQNTI SRIKETDAAK LREEYRRLVE GLKEANVARE TDIYLSNPVL PDEILQEAVP GSIRTAEHFV GFMKRFLEYL KARLRIHHVV QESAPQFLKD IFEKVCIDRK PLRFCAERLR SLLRTLEIAD IADFSPITLI SHFATLVSTY SKGFTIIIEP FEDKTPTIAN PVLHFSCMDP SIAIKPVFGR FQTVIITSGT LSPLDIYPRI LDFRPVTMAS FTMTLARTCL CPLIVGRGND QVAMTSKFET REDFAVIRNY GNLLLEMSAI VPDGIVAFFT SYMYMENIVA SWYEQGILEN IQRNKLIFIE TQDAAETSMA LEKYQEACEN GRGAILLSVA RGKVSEGIDF VHHFGRAVIM FGVPYVYTQS RILKARLEYL RDQFQIREND FLTFDAMRHA AQCVGRAIRG KTDYGLMIFA DKRYARADKR GKLPRWIQEH LTDGSLNLTI DETVQLSKHF LRQMAQPFRR EDQLGLSLLT LEQLQSEDML QKIAQIAHQA // ID F2CV91_HORVD Unreviewed; 758 AA. AC F2CV91; DT 31-MAY-2011, integrated into UniProtKB/TrEMBL. DT 31-MAY-2011, sequence version 1. DT 11-MAY-2016, entry version 35. DE SubName: Full=Predicted protein {ECO:0000313|EMBL:BAJ86762.1}; DE SubName: Full=Uncharacterized protein {ECO:0000313|EnsemblPlants:MLOC_66388.3}; OS Hordeum vulgare var. distichum (Domesticated barley). OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; OC Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum. OX NCBI_TaxID=112509; RN [1] {ECO:0000313|EMBL:BAJ86762.1} RP NUCLEOTIDE SEQUENCE. RC TISSUE=Shoot {ECO:0000313|EMBL:BAJ86762.1}; RX PubMed=21415278; DOI=10.1104/pp.110.171579; RA Matsumoto T., Tanaka T., Sakai H., Amano N., Kanamori H., Kurita K., RA Kikuta A., Kamiya K., Yamamoto M., Ikawa H., Fujii N., Hori K., RA Itoh T., Sato K.; RT "Comprehensive sequence analysis of 24,783 barley full-length cDNAs RT derived from 12 clone libraries."; RL Plant Physiol. 156:20-28(2011). RN [2] {ECO:0000313|EnsemblPlants:MLOC_66388.3} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=cv. Morex {ECO:0000313|EnsemblPlants:MLOC_66388.3}; RA Scholz U.; RT "The genome sequence of Hordeum vulgare subsp. vulgare."; RL Submitted (JUN-2012) to the EMBL/GenBank/DDBJ databases. RN [3] {ECO:0000313|EnsemblPlants:MLOC_66388.3} RP IDENTIFICATION. RC STRAIN=subsp. vulgare {ECO:0000313|EnsemblPlants:MLOC_66388.3}; RG EnsemblPlants; RL Submitted (JUN-2015) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AK355543; BAJ86762.1; -; mRNA. DR EnsemblPlants; MLOC_66388.3; MLOC_66388.3; MLOC_66388. DR EnsemblPlants; MLOC_66388.5; MLOC_66388.5; MLOC_66388. DR EnsemblPlants; MLOC_66388.6; MLOC_66388.6; MLOC_66388. DR EnsemblPlants; MLOC_66388.8; MLOC_66388.8; MLOC_66388. DR Gramene; MLOC_66388.3; MLOC_66388.3; MLOC_66388. DR Gramene; MLOC_66388.5; MLOC_66388.5; MLOC_66388. DR Gramene; MLOC_66388.6; MLOC_66388.6; MLOC_66388. DR Gramene; MLOC_66388.8; MLOC_66388.8; MLOC_66388. DR OMA; DEVWKYK; -. DR Proteomes; UP000011116; Unassembled WGS sequence. DR ExpressionAtlas; F2CV91; baseline. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0000724; P:double-strand break repair via homologous recombination; IEA:EnsemblPlants. DR GO; GO:0010286; P:heat acclimation; IEA:EnsemblPlants. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR GO; GO:0045893; P:positive regulation of transcription, DNA-templated; IEA:EnsemblPlants. DR GO; GO:0043687; P:post-translational protein modification; IEA:EnsemblPlants. DR GO; GO:0006457; P:protein folding; IEA:EnsemblPlants. DR GO; GO:0009644; P:response to high light intensity; IEA:EnsemblPlants. DR GO; GO:0042542; P:response to hydrogen peroxide; IEA:EnsemblPlants. DR GO; GO:0010212; P:response to ionizing radiation; IEA:EnsemblPlants. DR GO; GO:0009411; P:response to UV; IEA:EnsemblPlants. DR GO; GO:0000394; P:RNA splicing, via endonucleolytic cleavage and ligation; IEA:EnsemblPlants. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:EnsemblPlants. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 2: Evidence at transcript level; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000011116}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000011116}. FT DOMAIN 7 288 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 758 AA; 85595 MW; 2EBFAD87237D1BBE CRC64; MKFDLEGLTV HFPYAAIYPE QHAYMGELKR ALDARGHALL EMPTGTGKTA ALISLITSYS LANPSRPLRL IYCTRTVHEM EKTLAELRLL FSHLPPEASR SLLALGLSSR KNLCVHPQAS ASAARDSVDT ACRRLTASWV RDKAASDPES TPLCEFFESF DRAAAAGDLS SFMPPGVYTL ADLRSLGRER RICPYFLARQ MVKYANVVVY SYQYLLDPKV ASIVSREMQK ECVVVFDEAH NIDNVCIEAL SVSVRKQTLD GAERNLRRIS QEIDRFKATD ANRLRAEYNR LVDGLAQRGN LPISDAWLAN PSLPDDILKE AVPGNIRKAE HFLAVLKRLV KFLDGRLETE NVENEMPVSF VASIHSQAGI DQRMLRFCYD RLHSLLLTLE ITDTDEFMHI QTICDFATLI GTYSRGFSII IEPYDDRMPE IRDPVIQLSC HDASLAIQPV FERFQTVVIT SGTLSPITLY PRLLNFQPVI SRSFTMSLTR DCICPMVLTR GSDQLPVSTK FDMRSDPGVV RNYGRLLLEM ASSVPDGIVC FFVSYSYMDG IVNSWNEMGI LQDIMQHKLV FIETPDVVET TLALDNYRKA CDCGRGAVFF SVARGKVAEG IDFDRHYGRL VIMFGVPFQY TLSKILRARL EYLRETFQIK EGDFLTFDAL RQAAQCVGRV IRSKADYGMM IFADKRYSRH DKRSKLPGWI LSHLHEAHLN LSTDMALHTA REFLRRMAQP YDKAGSGGAK TLLTEEDLQD MGRAPMET // ID F2JHP5_CELLD Unreviewed; 808 AA. AC F2JHP5; DT 31-MAY-2011, integrated into UniProtKB/TrEMBL. DT 31-MAY-2011, sequence version 1. DT 11-MAY-2016, entry version 25. DE SubName: Full=DEAD_2 domain protein {ECO:0000313|EMBL:ADZ85387.1}; GN OrderedLocusNames=Clole_3704 {ECO:0000313|EMBL:ADZ85387.1}; OS Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB OS 11756 / RHM5) (Clostridium lentocellum). OC Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; OC Cellulosilyticum. OX NCBI_TaxID=642492 {ECO:0000313|EMBL:ADZ85387.1, ECO:0000313|Proteomes:UP000008467}; RN [1] {ECO:0000313|EMBL:ADZ85387.1, ECO:0000313|Proteomes:UP000008467} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5 RC {ECO:0000313|Proteomes:UP000008467}; RX PubMed=21398547; DOI=10.1128/JB.00239-11; RG US DOE Joint Genome Institute; RA Miller D.A., Suen G., Bruce D., Copeland A., Cheng J.F., Detter C., RA Goodwin L.A., Han C.S., Hauser L.J., Land M.L., Lapidus A., Lucas S., RA Meincke L., Pitluck S., Tapia R., Teshima H., Woyke T., Fox B.G., RA Angert E.R., Currie C.R.; RT "Complete genome sequence of the cellulose-degrading bacterium RT Cellulosilyticum lentocellum."; RL J. Bacteriol. 193:2357-2358(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002582; ADZ85387.1; -; Genomic_DNA. DR RefSeq; WP_013658663.1; NC_015275.1. DR STRING; 642492.Clole_3704; -. DR EnsemblBacteria; ADZ85387; ADZ85387; Clole_3704. DR KEGG; cle:Clole_3704; -. DR eggNOG; ENOG4107QX6; Bacteria. DR eggNOG; COG1199; LUCA. DR KO; K07464; -. DR BioCyc; CCLO642492:GIWK-3848-MONOMER; -. DR Proteomes; UP000008467; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR014001; Helicase_ATP-bd. DR InterPro; IPR001650; Helicase_C. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00487; DEXDc; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 7. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. DR PROSITE; PS51194; HELICASE_CTER; 1. PE 4: Predicted; KW Complete proteome {ECO:0000313|Proteomes:UP000008467}; KW Reference proteome {ECO:0000313|Proteomes:UP000008467}. FT DOMAIN 184 429 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT DOMAIN 587 804 Helicase C-terminal. FT {ECO:0000259|PROSITE:PS51194}. SQ SEQUENCE 808 AA; 93489 MW; 359F3F4FC62082C9 CRC64; MRISEGLVKI SVRELVEFVL REGSITSGVT SSNRAVLGTL AHKKIQESME ANYEAEVKMV HECEKDGIIF VVEGRADGII RDLVGVTIDE IKTTTKDLSL IDENYNSLHW AQAKCYAYFY AKENAQKEMQ VRLTYYHIET KEIKHLQRGF YFEELEAFFN QVITKYSKWI RFYMEWTKKR DGSLKELAFP FESYRRGQRE LAVSVYKSIQ QTNNLYVSAP TGIGKTMSTL FPALKAMGEG HGSKIFYLTA KTITRTIAEE AAVRLYEKGA KIKTITLTAK DKICFCDKRQ CHPDYCEWAN GHYDRVDDAV YEIINEEDLI SRSMVEDYAR KHRVCPFELA LDLSIWADIV ICDYNYVFDP SVGLKRFADN RDFVLLVDEA HNLVDRAREM YSASLSKRQV LSVKKNLGKG YLTISKELTK LNEWFLDLRR EYIDELGVYI SKEAPKTLYQ INRRLIAACD KKLQQGGENN LPADLIDLYF EAYSFNRIYE LFDEHYVVYG ESSGQEVRLK LFCIDPSTAI SSITSTCKSA IFFSATLLPI DYYKYMLGGK EDKAIAFDSP FIEENALRLI TTDVSTRYRH REGSYTKICN AICQLVEQKI GHYMVFFPSY KYMLEVFEYL RVMTSQRKED SDLQSDLQNE SYFSVYDDLG RLKYEVYKQT SEMSEEQREG FLERFVPNPD TTTINFCVLG GIFSEGIDLT GDRLIGVVVV GVGLPQLGLE RDLIKNHFDE EEKDGYHYAY TYPGINKVLQ AVGRLIRTEE DKGSILLIDD RFNTPLYESL LTPEFYQAKK VKTPEIASYV KRFWQQIE // ID F2PR65_TRIEC Unreviewed; 770 AA. AC F2PR65; DT 31-MAY-2011, integrated into UniProtKB/TrEMBL. DT 31-MAY-2011, sequence version 1. DT 11-MAY-2016, entry version 29. DE SubName: Full=DNA repair helicase RAD3 {ECO:0000313|EMBL:EGE04383.1}; GN ORFNames=TEQG_03584 {ECO:0000313|EMBL:EGE04383.1}; OS Trichophyton equinum (strain ATCC MYA-4606 / CBS 127.97) (Horse OS ringworm fungus). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; OC Eurotiomycetidae; Onygenales; Arthrodermataceae; Trichophyton. OX NCBI_TaxID=559882 {ECO:0000313|Proteomes:UP000009169}; RN [1] {ECO:0000313|Proteomes:UP000009169} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC MYA-4606 / CBS 127.97 {ECO:0000313|Proteomes:UP000009169}; RX PubMed=22951933; DOI=10.1128/mBio.00259-12; RA Martinez D.A., Oliver B.G., Graeser Y., Goldberg J.M., Li W., RA Martinez-Rossi N.M., Monod M., Shelest E., Barton R.C., Birch E., RA Brakhage A.A., Chen Z., Gurr S.J., Heiman D., Heitman J., Kosti I., RA Rossi A., Saif S., Samalova M., Saunders C.W., Shea T., RA Summerbell R.C., Xu J., Young S., Zeng Q., Birren B.W., Cuomo C.A., RA White T.C.; RT "Comparative genome analysis of Trichophyton rubrum and related RT dermatophytes reveals candidate genes involved in infection."; RL MBio 3:E259-E259(2012). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; DS995733; EGE04383.1; -; Genomic_DNA. DR EnsemblFungi; EGE04383; EGE04383; TEQG_03584. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000009169; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EGE04383.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000009169}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EGE04383.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EGE04383.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EGE04383.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000009169}. FT DOMAIN 7 287 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 248 275 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 770 AA; 88035 MW; 9EEBFED8F1A22631 CRC64; MEFFIDDLPI LFPYPRIYPE QYAYMCDLKK VLDAGGHCVL EMPSGTGKTI TLLALIVAYQ QHYPEHRKLI YCSRTMSEIE KALSELRALM KYRSQKLGVV EDFRALGLTS RKNLCLHPSV KREKSGAVVD ARCRSLTAGF IKEKKEKGED VELCIYHENL DLLEPSNLVP PGVFTLDGLL KYGEQHKQCP YFSARRMMPY CNVIIYSYHY LLDPKIAERV SKELSRDSII VFDEAHNIDN VCIESLSIDL TEDSLRKASR GANNLERKID DMKSSDADKL QSEYQKLVEG LREADEAREE EQLMANPVLP DDLLKESVPG NIRRAEHFVA FLKRFIEYLK TRMKVTHTIS ETPLSFLSHL KDLTFIERKP LRFCAERLTS LVRTLELVNI EDYQPLQEVA TFATLAATYE IGFLLILEPF ESDTATVPNP ILHFTCLDAA IAIKPVFDRF SSVIITSGTL SPLEMYPKML GFDAALQESY SMTLARRSFL PMIVTRGSDQ AQISSSFQIR NDPGVVRNYG NMLLEFCRIT PDGVVVFFPS YLYMESIISM WQGMGILDSV WNYKLILVET PDSQESSLAL ETYLSEGIDF DHHYGRTVLC IGVPFQYTES RILKARLEFL RENYRIREND FLSFDALRHA AQCLGRVLRG KDDYGVMVLA DRRFQKKRNQ LPKWISQAML ESETNLSTDM AVATAKSFLK SMAQPFKAKD QEGISTWSLE DLKRHLEKQK QEVEKTQGNK MAWDATNTGT ADTAMGDDDD FNEDLLAELE // ID F2SY13_TRIRC Unreviewed; 790 AA. AC F2SY13; DT 31-MAY-2011, integrated into UniProtKB/TrEMBL. DT 31-MAY-2011, sequence version 1. DT 11-MAY-2016, entry version 30. DE SubName: Full=DNA repair helicase rad15 {ECO:0000313|EMBL:EGD91250.1}; GN ORFNames=TERG_07472 {ECO:0000313|EMBL:EGD91250.1}; OS Trichophyton rubrum (strain ATCC MYA-4607 / CBS 118892) (Athlete's OS foot fungus). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; OC Eurotiomycetidae; Onygenales; Arthrodermataceae; Trichophyton. OX NCBI_TaxID=559305 {ECO:0000313|EMBL:EGD91250.1, ECO:0000313|Proteomes:UP000008864}; RN [1] {ECO:0000313|Proteomes:UP000008864} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC MYA-4607 / CBS 118892 {ECO:0000313|Proteomes:UP000008864}; RX PubMed=22951933; DOI=10.1128/mBio.00259-12; RA Martinez D.A., Oliver B.G., Graeser Y., Goldberg J.M., Li W., RA Martinez-Rossi N.M., Monod M., Shelest E., Barton R.C., Birch E., RA Brakhage A.A., Chen Z., Gurr S.J., Heiman D., Heitman J., Kosti I., RA Rossi A., Saif S., Samalova M., Saunders C.W., Shea T., RA Summerbell R.C., Xu J., Young S., Zeng Q., Birren B.W., Cuomo C.A., RA White T.C.; RT "Comparative genome analysis of Trichophyton rubrum and related RT dermatophytes reveals candidate genes involved in infection."; RL MBio 3:E259-E259(2012). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GG700657; EGD91250.1; -; Genomic_DNA. DR RefSeq; XP_003231852.1; XM_003231804.1. DR STRING; 559305.XP_003231852.1; -. DR EnsemblFungi; EGD91250; EGD91250; TERG_07472. DR GeneID; 10371739; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; F2SY13; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000008864; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EGD91250.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000008864}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EGD91250.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EGD91250.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EGD91250.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000008864}. FT DOMAIN 7 295 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 248 275 {ECO:0000256|SAM:Coils}. FT COILED 277 300 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 790 AA; 90116 MW; 7DECAB99E160F66D CRC64; MEFFIDDLPI LFPYPRIYPE QYAYMCDLKK VLDAGGHCVL EMPSGTGKTI TLLALIVAYQ QHYPEHRKLI YCSRTMSEIE KALSELRALM KYRSQKLGVV EDFRALGLTS RKNLCLHPSV KREKSGAVVD ARCRSLTAGF IKEKKEKGED VELCIYHENL DLLEPSNLVP PGVFTLDGLL KYGEQHKQCP YFSARRMMPY CNVIIYSYHY LLDPKIAERV SKELSRDSII VFDEAHNIDN VCIESLSIDL TEDSLRKASR GANNLERKID DMKSSDADRL QNEYQKLVEG LREADEAREE EQLMANPVLP DDLLKESVPG NIRRAEHFVA FLKRFIEYLK TRMKVTHTIS ETPLSFLSHL KDLTFIERKP LRFCAERLTS LVRTLELVNI EDYQPLQEVA TFATLAATYE KGFLLILEPF ESDTATVPNP ILHFTCLDAA IAIKPVFDRF SSVIITSGTL SPLEMYPKML GFDAALQESY SMTLARRSFL PMIVTRGSDQ AQISSSFQIR NDPGVVRNYG NMLLEFCRIT PDGVVVFFPS YLYMESIISM WQGMGILDSV WNYKLILVET PDSQESSLAL ETYRTACCNG RGAVLLCVAR GKVSEGIDFD HHYGRTVLCI GVPFQYTESR ILKARLEFLR ENYRIRENDF LSFDALRHAA QCLGRVLRGK DDYGVMVLAD RRFQKKRNQL PKWISQAMLE SETNLSTDMA VATAKSFLKS MAQPFKAKDQ EGISTWSLED LKHHLEKQKQ EIEKTQGNKM AWDATNTGIA DTAMGDDDDF NEDLLAELES // ID F2UDS2_SALR5 Unreviewed; 523 AA. AC F2UDS2; DT 31-MAY-2011, integrated into UniProtKB/TrEMBL. DT 31-MAY-2011, sequence version 1. DT 11-MAY-2016, entry version 22. DE SubName: Full=TFIIH basal transcription factor complex helicase XPD subunit {ECO:0000313|EMBL:EGD74772.1}; GN ORFNames=PTSG_12522 {ECO:0000313|EMBL:EGD74772.1}; OS Salpingoeca rosetta (strain ATCC 50818 / BSB-021). OC Eukaryota; Choanoflagellida; Salpingoecidae; Salpingoeca. OX NCBI_TaxID=946362 {ECO:0000313|Proteomes:UP000007799}; RN [1] {ECO:0000313|Proteomes:UP000007799} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 50818 {ECO:0000313|Proteomes:UP000007799}; RA Russ C., Cuomo C., Burger G., Gray M.W., Holland P.W.H., King N., RA Lang F.B.F., Roger A.J., Ruiz-Trillo I., Young S.K., Zeng Q., RA Gargeya S., Alvarado L., Berlin A., Chapman S.B., Chen Z., RA Freedman E., Gellesch M., Goldberg J., Griggs A., Gujja S., RA Heilman E., Heiman D., Howarth C., Mehta T., Neiman D., Pearson M., RA Roberts A., Saif S., Shea T., Shenoy N., Sisk P., Stolte C., Sykes S., RA White J., Yandava C., Haas B., Nusbaum C., Birren B.; RT "Annotation of Salpingoeca rosetta."; RL Submitted (AUG-2009) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00051130}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00556201}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00051146}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GL832970; EGD74772.1; -; Genomic_DNA. DR RefSeq; XP_004992417.1; XM_004992360.1. DR EnsemblProtists; EGD74772; EGD74772; PTSG_12522. DR GeneID; 16072984; -. DR KEGG; sre:PTSG_12522; -. DR InParanoid; F2UDS2; -. DR Proteomes; UP000007799; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00491; HELICc2; 1. DR TIGRFAMs; TIGR00604; rad3; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00442371, KW ECO:0000313|EMBL:EGD74772.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000007799}; KW Helicase {ECO:0000256|SAAS:SAAS00442371, ECO:0000313|EMBL:EGD74772.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00442371, KW ECO:0000313|EMBL:EGD74772.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00442371, KW ECO:0000313|EMBL:EGD74772.1}; Nucleus {ECO:0000256|SAAS:SAAS00442313}; KW Reference proteome {ECO:0000313|Proteomes:UP000007799}. FT DOMAIN 260 404 HELICc2. {ECO:0000259|SMART:SM00491}. SQ SEQUENCE 523 AA; 58209 MW; 4B20874CCB7CADE9 CRC64; MSDRVSCSGL QTTRELNATD AVMANPVLPS HVVEEAVPGN IRKAEHFVSF LKRFVEYLKK RLDVNHVVNE PPAVFLDQVS IDAAIDRKPL RFASERLSSL LQTLELTDYD DFSSLMRVAT FATLVATYTD GFSLIIEPFD DRAPTIRDPV LHFSCMDASL AIRPVFERFQ SVVITSGTLS PLEMYPKILN FRPVTVCTFD MTLSRTSLLP MIVTCGSDQA KISSRYESRE DNSVKRNYGH LLLDMARVVP DGIVCFFVSY EYLESMVTTW HDQGIMDKIK QKKLVFAETQ DVVETSIALD NYQRACENGR GAILLSVARG KVSEGIDFDH HLGRAVLMFG IPYVYTQSRI LKARLEFLTD NFQIKEGAFL TFDAMRHAAQ CVGRAIRGKS DYGIMCFADS RYASEDKKGK LPKWIQKYIT PGHTNLSTDD AVKLAKRFLR EMAQPYESKP GLSLLSLQQV QAGTSQIERS VKIAIEFEAS SSSTPSTHPH APGPSKPATS TTTMTAASEA DSGATTMDVR PDA // ID F4P2D7_BATDJ Unreviewed; 758 AA. AC F4P2D7; DT 28-JUN-2011, integrated into UniProtKB/TrEMBL. DT 28-JUN-2011, sequence version 1. DT 11-MAY-2016, entry version 28. DE SubName: Full=Putative uncharacterized protein {ECO:0000313|EMBL:EGF80866.1}; GN ORFNames=BATDEDRAFT_29908 {ECO:0000313|EMBL:EGF80866.1}; OS Batrachochytrium dendrobatidis (strain JAM81 / FGSC 10211) (Frog OS chytrid fungus). OC Eukaryota; Fungi; Chytridiomycota; Chytridiomycetes; Rhizophydiales; OC Rhizophydiales incertae sedis; Batrachochytrium. OX NCBI_TaxID=684364 {ECO:0000313|Proteomes:UP000007241}; RN [1] {ECO:0000313|EMBL:EGF80866.1, ECO:0000313|Proteomes:UP000007241} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=JAM81 / FGSC 10211 {ECO:0000313|Proteomes:UP000007241}; RG US DOE Joint Genome Institute (JGI-PGF); RA Kuo A., Salamov A., Schmutz J., Lucas S., Pitluck S., Rosenblum E., RA Stajich J., Eisen M., Grigoriev I.V.; RT "The draft genome of Batrachochytrium dendrobatidis."; RL Submitted (DEC-2009) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GL882883; EGF80866.1; -; Genomic_DNA. DR RefSeq; XP_006678544.1; XM_006678481.1. DR EnsemblFungi; EGF80866; EGF80866; BATDEDRAFT_29908. DR GeneID; 18239920; -. DR InParanoid; F4P2D7; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000007241; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 7. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000007241}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000007241}. FT DOMAIN 7 296 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 758 AA; 86410 MW; 8CCDB1EE0F44C3AB CRC64; MKFTLDDLPI IFPYEYIYPE QYAYMKDMKR ALDAQGHCLL EMPSGTGKTI SLLSLIVAYQ QFYPEKRKLI YCSRTVPEIE KALAELSRLM KYREEQGLVE NFLGLGLTSR RNLCIHPIVS KEKRGTVTDA KCRNLTSPWV RENAKHEPDI ELCEFYETLE AADTTATVPS GVYTLEDLKE YSTKKKYCPY FLARRLLPFA NVIIYSYHYL LDPKVADMVS KELSRDCIVV FDEAHNIDNV CTESLSIDIS KPMLDASARS VAELSRRIES MKVSNSEKLQ NEYTRLRQAQ ESRDAGEIMT NPVLPDDILQ ESVPGNIRRA EHFVAFLRRF IEYLKTRMRV MHVVAESPLS FLQHVKEITF IDKKPLRFSA ERLGSLIKTL EINDLTDYSA LQKVASFATL VATYQKGFVL ILEPFENDMD TIPNPVLHFT CLDATLAIKP VFDRFSSVII TSGTLSPMEL YPMLLGFEPV VTESYQMTLT RTCFLPLIVT RGSDQVTVSS KFEVRNDVAV VRNYGNILLE FAKITPDGLV CFFPSYLYME SIVAAWNDLG MLRELLKLKL IFIETPDATE TSIALENYRQ ACDNGRGAVL LSVARGKVSE GVDFDHNYGR AVILFGIPYQ YTESRILKAR LEYLRDNSRI RENDFLTFDA MRHGAQCVGR VLRGKTDYGL MVFADKRFGR MDKRSKLPKW ILSGMTEAGM NLSTDMAVSM AKKFLRTMAQ PLEGNSMGVS LWDAKEVTRR ERVARTSVSE QGNAMQVD // ID F4PVR8_DICFS Unreviewed; 791 AA. AC F4PVR8; DT 28-JUN-2011, integrated into UniProtKB/TrEMBL. DT 28-JUN-2011, sequence version 1. DT 11-MAY-2016, entry version 23. DE SubName: Full=Transcription factor IIH component {ECO:0000313|EMBL:EGG20082.1}; GN Name=repD {ECO:0000313|EMBL:EGG20082.1}; GN ORFNames=DFA_07199 {ECO:0000313|EMBL:EGG20082.1}; OS Dictyostelium fasciculatum (strain SH3) (Slime mold). OC Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Dictyostelium. OX NCBI_TaxID=1054147 {ECO:0000313|Proteomes:UP000007797}; RN [1] {ECO:0000313|EMBL:EGG20082.1, ECO:0000313|Proteomes:UP000007797} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=SH3 {ECO:0000313|EMBL:EGG20082.1, RC ECO:0000313|Proteomes:UP000007797}; RA Gloeckner G., Schaap P., Noegel A.A., Felder M., Eichinger L., RA Heidel A.J., Platzer M.; RT "Living fossils from the dawn of multicellularity."; RL Submitted (JAN-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GL883013; EGG20082.1; -; Genomic_DNA. DR RefSeq; XP_004367065.1; XM_004367008.1. DR EnsemblProtists; EGG20082; EGG20082; DFA_07199. DR GeneID; 14872306; -. DR KEGG; dfa:DFA_07199; -. DR KO; K10844; -. DR Proteomes; UP000007797; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000007797}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000007797}. FT DOMAIN 7 278 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 791 AA; 89440 MW; DBF64CC5B12EB4EF CRC64; MKFYLDDLLV YFPYAFIYPE QYNYMLHLKR SLDNGGPCML EMPSGTGKTV SLLALISSYQ VKNPNVKLIY CSRTVPEIEQ AVEEARKVLA YRNAELGDKA PKTLCMAMSS RRNLCVHPRV SSEREGKTVD SLCRDLTSPW IRDNPQADKC SFNENFESNG QEILLEGVYN IGDLKEFGLK NQMCPYFLSR RIINFANIVI FSYQYMLDPK IASLITASFD SNSIVVFDEA HNIDNVCINS LSVNIDNRIL EAGSRNITKI TGQIDKVKAI DEKRLKDEYS RLLGGLARTG ASNRDELMTD PVLPADVIRE AVPGNIRKAE HYLSLMRRFM DYLANRLRSQ TLISESPMAF LQSLYHTTSI NAKTLRFCSQ RLSSLLRTLQ ISDINQFSGI GVIADLATLI GTYNKGFLII IEPFDQRSPN QFDPVFQFCC LDASIGMKPI FDKFKNVVIT SGTLSPLDIY TKILNIRPTT VERLPMSLIR DSICPCILTR GSDQISVSTK FDVRSDTTVI RNYGSLLVEM SSIVPDGIIC FFTSYSYMEQ IVSVWNEMGL LNKVLSNKLI FVETSDPAES ALALQNYKKA CDNGRGAVLL SVARGKVSEG IDFDHHYGRC VILYGIPYIN TESRVLRARL EFLRDQFQIK ESEFLSFDAM RTASQCVGRV IRGKTDYGIM IFADKRFNRL DKRNKLPQWI NQSCKPEHLN LSTDMAVGLC RKFLRDMAQP IPRNQQLGKV LWSIKDVEKQ EPSKNQSSST TTTTTTTTTN NNNNNNNNNN NNNNNNNNNN NNGNTAQNGN H // ID F4RRW8_MELLP Unreviewed; 795 AA. AC F4RRW8; DT 28-JUN-2011, integrated into UniProtKB/TrEMBL. DT 28-JUN-2011, sequence version 1. DT 11-MAY-2016, entry version 29. DE SubName: Full=Putative uncharacterized protein {ECO:0000313|EMBL:EGG04750.1}; GN ORFNames=MELLADRAFT_108080 {ECO:0000313|EMBL:EGG04750.1}; OS Melampsora larici-populina (strain 98AG31 / pathotype 3-4-7) (Poplar OS leaf rust fungus). OC Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; OC Pucciniomycetes; Pucciniales; Melampsoraceae; Melampsora. OX NCBI_TaxID=747676 {ECO:0000313|Proteomes:UP000001072}; RN [1] {ECO:0000313|Proteomes:UP000001072} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=98AG31 / pathotype 3-4-7 {ECO:0000313|Proteomes:UP000001072}; RX PubMed=21536894; DOI=10.1073/pnas.1019315108; RA Duplessis S., Cuomo C.A., Lin Y.-C., Aerts A., Tisserant E., RA Veneault-Fourrey C., Joly D.L., Hacquard S., Amselem J., RA Cantarel B.L., Chiu R., Coutinho P.M., Feau N., Field M., Frey P., RA Gelhaye E., Goldberg J., Grabherr M.G., Kodira C.D., Kohler A., RA Kuees U., Lindquist E.A., Lucas S.M., Mago R., Mauceli E., Morin E., RA Murat C., Pangilinan J.L., Park R., Pearson M., Quesneville H., RA Rouhier N., Sakthikumar S., Salamov A.A., Schmutz J., Selles B., RA Shapiro H., Tanguay P., Tuskan G.A., Henrissat B., Van de Peer Y., RA Rouze P., Ellis J.G., Dodds P.N., Schein J.E., Zhong S., Hamelin R.C., RA Grigoriev I.V., Szabo L.J., Martin F.; RT "Obligate biotrophy features unraveled by the genomic analysis of rust RT fungi."; RL Proc. Natl. Acad. Sci. U.S.A. 108:9166-9171(2011). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GL883116; EGG04750.1; -; Genomic_DNA. DR RefSeq; XP_007411841.1; XM_007411779.1. DR EnsemblFungi; EGG04750; EGG04750; MELLADRAFT_108080. DR GeneID; 18923363; -. DR KEGG; mlr:MELLADRAFT_108080; -. DR InParanoid; F4RRW8; -. DR KO; K10844; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000001072; Unassembled WGS sequence. DR GO; GO:0000439; C:core TFIIH complex; IEA:EnsemblFungi. DR GO; GO:0005829; C:cytosol; IEA:EnsemblFungi. DR GO; GO:0005675; C:holo TFIIH complex; IEA:EnsemblFungi. DR GO; GO:0000112; C:nucleotide-excision repair factor 3 complex; IEA:EnsemblFungi. DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:EnsemblFungi. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0043141; F:ATP-dependent 5'-3' DNA helicase activity; IEA:EnsemblFungi. DR GO; GO:0003684; F:damaged DNA binding; IEA:EnsemblFungi. DR GO; GO:0000717; P:nucleotide-excision repair, DNA duplex unwinding; IEA:EnsemblFungi. DR GO; GO:0033683; P:nucleotide-excision repair, DNA incision; IEA:EnsemblFungi. DR GO; GO:0070816; P:phosphorylation of RNA polymerase II C-terminal domain; IEA:EnsemblFungi. DR GO; GO:0045951; P:positive regulation of mitotic recombination; IEA:EnsemblFungi. DR GO; GO:0010525; P:regulation of transposition, RNA-mediated; IEA:EnsemblFungi. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:EnsemblFungi. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000001072}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000001072}. FT DOMAIN 7 296 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 795 AA; 89952 MW; 3AACFC4C9B057F3D CRC64; MIFNIDDLEI IFPYDKIYPE QMSDLKRTLD VGGHCVLEMP SGTGKTISLL SLIVAYQQNH PEKRKLVYCS RTVPEIEKAL IELKRLMAYR ASQLRLRAEL TNAGPIEDED FLGIGLTSRK NLCIHPDVSR EKKGKVVDAR CRDLTSAWAC EQGRANPGSV PLCEFHEKLG ELEAGDLIPR GVWTLEEITN YGHQQGICPY FAVRRMLAYA DVVIYSFHYL LDPKVATQVS KEISPNSIVV FDEAHNIDNV CIESLSIDLN KSILDNAGRA IENLEVKIQE IKRTDASKLQ NEYQRLVRGL QGSELEQAED EAGVIATPVL PDDLLQEAIP GNIRRAEHFT AFLTRFVEYL KTRMRVLHVV AETPLSFLQH LKDLTFIDRK PLRFCSERLT SLIRTLELTQ LDQYNGLQQV ASFATLVATY EKGFLLILEP FETENATVPN PVFHLTCLDA SLAIKPVFDR FSSVVITSGT ISPLDMYPKM LGFESAVQES YSMTLTRNCF LPLVITRGAD QVAISSRFEV RNDPSVVRNF GTVLIDYCKI VPDGIVAFFP SYLYMESIVA AWHDMGILKE VWKYKLIFVE TPDAVETSIA LENYRRACDN GKGAVLLSVA RGKVSEGIDF DHNYGRAVIM FGIPYQYTES RILKARLEFL RDNYRIREND YLTFDAMRHA AQCVGRVLRG KTDYGLMIFA DKRFAKADKR AKLPKWINAY ITDTATNLST DMAMVISKRF LRSMAQPFEI GQDGISLWGV EEIKAQEEKR RLPGPSATAE EEEGDNYFDG LEDQALLDMR LGPAE // ID F4WHJ1_ACREC Unreviewed; 774 AA. AC F4WHJ1; DT 28-JUN-2011, integrated into UniProtKB/TrEMBL. DT 28-JUN-2011, sequence version 1. DT 11-MAY-2016, entry version 24. DE SubName: Full=TFIIH basal transcription factor complex helicase subunit {ECO:0000313|EMBL:EGI66345.1}; GN ORFNames=G5I_05153 {ECO:0000313|EMBL:EGI66345.1}; OS Acromyrmex echinatior (Panamanian leafcutter ant) (Acromyrmex OS octospinosus echinatior). OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; OC Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; OC Vespoidea; Formicidae; Myrmicinae; Acromyrmex. OX NCBI_TaxID=103372 {ECO:0000313|Proteomes:UP000007755}; RN [1] {ECO:0000313|Proteomes:UP000007755} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RX PubMed=21719571; DOI=10.1101/gr.121392.111; RA Nygaard S., Zhang G., Schiott M., Li C., Wurm Y., Hu H., Zhou J., RA Ji L., Qiu F., Rasmussen M., Pan H., Hauser F., Krogh A., RA Grimmelikhuijzen C.J., Wang J., Boomsma J.J.; RT "The genome of the leaf-cutting ant Acromyrmex echinatior suggests key RT adaptations to advanced social life and fungus farming."; RL Genome Res. 0:0-0(2011). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GL888161; EGI66345.1; -; Genomic_DNA. DR InParanoid; F4WHJ1; -. DR Proteomes; UP000007755; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 2. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EGI66345.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000007755}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EGI66345.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EGI66345.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EGI66345.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000007755}. FT DOMAIN 22 306 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 271 313 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 774 AA; 89067 MW; 632369EF6ECBA720 CRC64; MFCSFIHLSI NLHFCYRISV DGLIVYFPYD YIYPEQYAYM LELKRGLDAK GHCLLEMPSG TGKTITLLSL IVAYMLEHPL DVTKLIYCSR TVPEIEKVIE ELKKLIDYYE KETKSKPKIV GLVLSSRKNM CIHPEVSRER EGKIVDGRCH SLTASYVRER HNYDESTPIC NFYEGFDMEG REQIMPPGIY SIDDLKEYGK DRNWCPYFLA RFTILHAQIV VYSYHYLLDP KIAETVSKEL SRSSVVIFDE AHNIDNVCID SMSVKINRKT MEKSTANIQL LEKTVAEMRQ EDVNKLKEEY ERLVEGLRDA QFQRETDVIL ANPILPNEIL EEVIPGNIRN AEHFVSFLKR FVEYLKTRLR VQHVVQESPA AFLKDIQAKV AIERKPLRFC AQRLASLLRT MEITDLTDFS PIILVTHLAT LVSTYTHGFT IIVEPFDDKT PTVLNPILHF SCLDSSIAIK PIFDRFQSVV ITSGTLSPLD MYPKVLNFHP VIMSSFTMTL ARPCLLPMIV AKGNDQVAIS SKYETREDVA VIRNYGQLLV EFAATVPDGL VCFFTSYLYM ESVVAAWYDQ GVVDQLQRHK LLFIETQDSA ETSLALINYI KACENGRGAV LLSVARGKVS EGVDFDHHLG RAVLMFGIPY VYTQSRILKA RLEYLRDQFQ IRENDFLTFD AMRHAAQCVG RAIRGKTDYG IMVFADKRFS RIDKRSKLPK WIQEHLNDSL CNLSTEEAIQ ISKRWLRQMA QPFTRENQLG LSLLTREQLE KEEAAKIEQK AQQN // ID F6HQ82_VITVI Unreviewed; 758 AA. AC F6HQ82; DT 27-JUL-2011, integrated into UniProtKB/TrEMBL. DT 27-JUL-2011, sequence version 1. DT 11-MAY-2016, entry version 37. DE SubName: Full=Putative uncharacterized protein {ECO:0000313|EMBL:CCB56839.1}; GN OrderedLocusNames=VIT_07s0104g00060 {ECO:0000313|EMBL:CCB56839.1}; OS Vitis vinifera (Grape). OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; OC Pentapetalae; rosids; Vitales; Vitaceae; Vitis. OX NCBI_TaxID=29760 {ECO:0000313|Proteomes:UP000009183}; RN [1] {ECO:0000313|Proteomes:UP000009183} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=cv. Pinot noir / PN40024 {ECO:0000313|Proteomes:UP000009183}; RX PubMed=17721507; DOI=10.1038/nature06148; RG The French-Italian Public Consortium for Grapevine Genome Characterization.; RA Jaillon O., Aury J.-M., Noel B., Policriti A., Clepet C., RA Casagrande A., Choisne N., Aubourg S., Vitulo N., Jubin C., Vezzi A., RA Legeai F., Hugueney P., Dasilva C., Horner D., Mica E., Jublot D., RA Poulain J., Bruyere C., Billault A., Segurens B., Gouyvenoux M., RA Ugarte E., Cattonaro F., Anthouard V., Vico V., Del Fabbro C., RA Alaux M., Di Gaspero G., Dumas V., Felice N., Paillard S., Juman I., RA Moroldo M., Scalabrin S., Canaguier A., Le Clainche I., Malacrida G., RA Durand E., Pesole G., Laucou V., Chatelet P., Merdinoglu D., RA Delledonne M., Pezzotti M., Lecharny A., Scarpelli C., Artiguenave F., RA Pe M.E., Valle G., Morgante M., Caboche M., Adam-Blondon A.-F., RA Weissenbach J., Quetier F., Wincker P.; RT "The grapevine genome sequence suggests ancestral hexaploidization in RT major angiosperm phyla."; RL Nature 449:463-467(2007). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FN596005; CCB56839.1; -; Genomic_DNA. DR RefSeq; XP_002277634.1; XM_002277598.2. DR ProteinModelPortal; F6HQ82; -. DR STRING; 29760.VIT_07s0104g00060.t01; -. DR EnsemblPlants; VIT_07s0104g00060.t01; VIT_07s0104g00060.t01; VIT_07s0104g00060. DR GeneID; 100240869; -. DR Gramene; VIT_07s0104g00060.t01; VIT_07s0104g00060.t01; VIT_07s0104g00060. DR KEGG; vvi:100240869; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; F6HQ82; -. DR KO; K10844; -. DR Proteomes; UP000009183; Chromosome 7. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0000724; P:double-strand break repair via homologous recombination; IEA:EnsemblPlants. DR GO; GO:0010286; P:heat acclimation; IEA:EnsemblPlants. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR GO; GO:0045893; P:positive regulation of transcription, DNA-templated; IEA:EnsemblPlants. DR GO; GO:0043687; P:post-translational protein modification; IEA:EnsemblPlants. DR GO; GO:0006457; P:protein folding; IEA:EnsemblPlants. DR GO; GO:0009644; P:response to high light intensity; IEA:EnsemblPlants. DR GO; GO:0042542; P:response to hydrogen peroxide; IEA:EnsemblPlants. DR GO; GO:0010212; P:response to ionizing radiation; IEA:EnsemblPlants. DR GO; GO:0009411; P:response to UV; IEA:EnsemblPlants. DR GO; GO:0000394; P:RNA splicing, via endonucleolytic cleavage and ligation; IEA:EnsemblPlants. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:EnsemblPlants. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000009183}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000009183}. FT DOMAIN 7 285 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 758 AA; 85923 MW; 823163CB93756B03 CRC64; MKFQIEDVTV YFPYDNIYPE QYSYMVELKR ALDAKGHALL EMPTGTGKTI ALLSLITSYA LSKPSNPIKL LYCTRTVHEM EKTLAELRLL HQYQLRHLGP AARILALGLS SRKNLCINPA VVSAENRDSV DAGCRKLTAS WVRALAVENP NIPTCQFFEN YEKAASEAVL PPGVYTLQDL RAFGRDKGWC PYFLARHMVQ FANVVVYSYQ YLLDPKVAGI ISKEMQRESV VVFDEAHNID NVCIEALSVS VRRQTLEGAT RNLSKMAQEI NRFKATDAGR LRAEYNRLVE GLAQRGNLPI SDTWLANPAL PDDILKEAVP GNIRRAEHFL SVLRRLVQYL HGRLETENVE KEGPVAFVAS INSQAGIDQK MLKFCYDRLH SLMLTLEITD TDEFLHIQTI CDFATLVGTY TRGFSIIIEP FDERMPHIPD PVLQLSCHDA SLAIKPVFER FQSVVITSGT LSPIDLYPRL LNFNPVVSRS FTMSLTRNCI CPMVLTRGSD QLPVSTKFDM RSDPGVVRNY GRLLLEMVSV VPDGIVCFFV SYSYMDGIVN TWNESGILKE IMQHKLVFIE TQDVVETTLA LDNYRRACDC GRGAVFFSVA RGKVAEGIDF DRHYGRLVIM FGVPFQYTLS RILLARLEYL RETFQIKEGD FLTFDALRQA AQCVGRVIRS KADYGMMIFA DKRYSRHDKR SKLPGWILSH LRDAHLNLST DMALHIAREF LRKMAQPYDK AGVSGRKTLL SEEDLEKMGD GTTNEMLF // ID F6UND4_ORNAN Unreviewed; 142 AA. AC F6UND4; DT 27-JUL-2011, integrated into UniProtKB/TrEMBL. DT 27-JUL-2011, sequence version 1. DT 13-APR-2016, entry version 28. DE SubName: Full=Uncharacterized protein {ECO:0000313|Ensembl:ENSOANP00000003316}; GN Name=LOC100090468 {ECO:0000313|Ensembl:ENSOANP00000003316}; OS Ornithorhynchus anatinus (Duckbill platypus). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Mammalia; Monotremata; Ornithorhynchidae; Ornithorhynchus. OX NCBI_TaxID=9258 {ECO:0000313|Ensembl:ENSOANP00000003316, ECO:0000313|Proteomes:UP000002279}; RN [1] {ECO:0000313|Proteomes:UP000002279} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Glennie {ECO:0000313|Proteomes:UP000002279}; RX PubMed=18464734; DOI=10.1038/nature06936; RA Warren W.C., Hillier L.W., Marshall Graves J.A., Birney E., RA Ponting C.P., Grutzner F., Belov K., Miller W., Clarke L., RA Chinwalla A.T., Yang S.P., Heger A., Locke D.P., Miethke P., RA Waters P.D., Veyrunes F., Fulton L., Fulton B., Graves T., Wallis J., RA Puente X.S., Lopez-Otin C., Ordonez G.R., Eichler E.E., Chen L., RA Cheng Z., Deakin J.E., Alsop A., Thompson K., Kirby P., RA Papenfuss A.T., Wakefield M.J., Olender T., Lancet D., Huttley G.A., RA Smit A.F., Pask A., Temple-Smith P., Batzer M.A., Walker J.A., RA Konkel M.K., Harris R.S., Whittington C.M., Wong E.S., Gemmell N.J., RA Buschiazzo E., Vargas Jentzsch I.M., Merkel A., Schmitz J., Zemann A., RA Churakov G., Kriegs J.O., Brosius J., Murchison E.P., RA Sachidanandam R., Smith C., Hannon G.J., Tsend-Ayush E., McMillan D., RA Attenborough R., Rens W., Ferguson-Smith M., Lefevre C.M., Sharp J.A., RA Nicholas K.R., Ray D.A., Kube M., Reinhardt R., Pringle T.H., RA Taylor J., Jones R.C., Nixon B., Dacheux J.L., Niwa H., Sekita Y., RA Huang X., Stark A., Kheradpour P., Kellis M., Flicek P., Chen Y., RA Webber C., Hardison R., Nelson J., Hallsworth-Pepin K., Delehaunty K., RA Markovic C., Minx P., Feng Y., Kremitzki C., Mitreva M., Glasscock J., RA Wylie T., Wohldmann P., Thiru P., Nhan M.N., Pohl C.S., Smith S.M., RA Hou S., Nefedov M., de Jong P.J., Renfree M.B., Mardis E.R., RA Wilson R.K.; RT "Genome analysis of the platypus reveals unique signatures of RT evolution."; RL Nature 453:175-183(2008). RN [2] {ECO:0000313|Ensembl:ENSOANP00000003316} RP IDENTIFICATION. RC STRAIN=Glennie {ECO:0000313|Ensembl:ENSOANP00000003316}; RG Ensembl; RL Submitted (JUL-2011) to UniProtKB. CC -!- CAUTION: The sequence shown here is derived from an Ensembl CC automatic analysis pipeline and should be considered as CC preliminary data. {ECO:0000313|Ensembl:ENSOANP00000003316}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR STRING; 9258.ENSOANP00000003316; -. DR Ensembl; ENSOANT00000003317; ENSOANP00000003316; ENSOANG00000002088. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR GeneTree; ENSGT00550000075092; -. DR InParanoid; F6UND4; -. DR OrthoDB; EOG70W3CM; -. DR Proteomes; UP000002279; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:InterPro. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR InterPro; IPR010643; HBB. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06777; HBB; 1. DR PRINTS; PR00852; XRODRMPGMNTD. PE 4: Predicted; KW Complete proteome {ECO:0000313|Proteomes:UP000002279}; KW Reference proteome {ECO:0000313|Proteomes:UP000002279}. FT DOMAIN 1 142 HBB. {ECO:0000259|Pfam:PF06777}. SQ SEQUENCE 142 AA; 16068 MW; 4B888E1815CC8F7F CRC64; RIKETDEQRL HEEYRRLVEG LREAGAARET DAHLANPVLP DAILQEAVPG SIRTAEHFVG FLRRLLEFLK WRLRVQHAVQ ESPAAFLGGL AQRVCIPPKP LRFCAERLRS LLHTLEISDL TDFSPLTLLA NFATLVSTYT KG // ID F6V814_XENTR Unreviewed; 743 AA. AC F6V814; DT 27-JUL-2011, integrated into UniProtKB/TrEMBL. DT 27-JUL-2011, sequence version 1. DT 11-MAY-2016, entry version 32. DE SubName: Full=Uncharacterized protein {ECO:0000313|Ensembl:ENSXETP00000039540}; DE Flags: Fragment; GN Name=ercc2 {ECO:0000313|Ensembl:ENSXETP00000039540}; OS Xenopus tropicalis (Western clawed frog) (Silurana tropicalis). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; OC Silurana. OX NCBI_TaxID=8364 {ECO:0000313|Ensembl:ENSXETP00000039540, ECO:0000313|Proteomes:UP000008143}; RN [1] {ECO:0000313|Ensembl:ENSXETP00000039540} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RX PubMed=20431018; DOI=10.1126/science.1183670; RA Hellsten U., Harland R.M., Gilchrist M.J., Hendrix D., Jurka J., RA Kapitonov V., Ovcharenko I., Putnam N.H., Shu S., Taher L., RA Blitz I.L., Blumberg B., Dichmann D.S., Dubchak I., Amaya E., RA Detter J.C., Fletcher R., Gerhard D.S., Goodstein D., Graves T., RA Grigoriev I.V., Grimwood J., Kawashima T., Lindquist E., Lucas S.M., RA Mead P.E., Mitros T., Ogino H., Ohta Y., Poliakov A.V., Pollet N., RA Robert J., Salamov A., Sater A.K., Schmutz J., Terry A., Vize P.D., RA Warren W.C., Wells D., Wills A., Wilson R.K., Zimmerman L.B., RA Zorn A.M., Grainger R., Grammer T., Khokha M.K., Richardson P.M., RA Rokhsar D.S.; RT "The genome of the Western clawed frog Xenopus tropicalis."; RL Science 328:633-636(2010). RN [2] {ECO:0000313|Ensembl:ENSXETP00000039540} RP IDENTIFICATION. RG Ensembl; RL Submitted (JUN-2011) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an Ensembl CC automatic analysis pipeline and should be considered as CC preliminary data. {ECO:0000313|Ensembl:ENSXETP00000039540}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AAMC01014546; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AAMC01014547; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR ProteinModelPortal; F6V814; -. DR Ensembl; ENSXETT00000039540; ENSXETP00000039540; ENSXETG00000018229. DR Xenbase; XB-GENE-949792; ercc2. DR GeneTree; ENSGT00550000075092; -. DR Reactome; R-XTR-112382; Formation of RNA Pol II elongation complex. DR Reactome; R-XTR-113418; Formation of the Early Elongation Complex. DR Reactome; R-XTR-5696395; Formation of Incision Complex in GG-NER. DR Reactome; R-XTR-5696400; Dual Incision in GG-NER. DR Reactome; R-XTR-674695; RNA Polymerase II Pre-transcription Events. DR Reactome; R-XTR-6781823; Formation of TC-NER Pre-Incision Complex. DR Reactome; R-XTR-6782135; Dual incision in TC-NER. DR Reactome; R-XTR-6782210; Gap-filling DNA repair synthesis and ligation in TC-NER. DR Reactome; R-XTR-72086; mRNA Capping. DR Reactome; R-XTR-73762; RNA Polymerase I Transcription Initiation. DR Reactome; R-XTR-73772; RNA Polymerase I Promoter Escape. DR Reactome; R-XTR-73776; RNA Polymerase II Promoter Escape. DR Reactome; R-XTR-73777; RNA Polymerase I Chain Elongation. DR Reactome; R-XTR-73779; RNA Polymerase II Transcription Pre-Initiation And Promoter Opening. DR Reactome; R-XTR-73863; RNA Polymerase I Transcription Termination. DR Reactome; R-XTR-75953; RNA Polymerase II Transcription Initiation. DR Reactome; R-XTR-75955; RNA Polymerase II Transcription Elongation. DR Reactome; R-XTR-76042; RNA Polymerase II Transcription Initiation And Promoter Clearance. DR Reactome; R-XTR-77075; RNA Pol II CTD phosphorylation and interaction with CE. DR Proteomes; UP000008143; Unassembled WGS sequence. DR ExpressionAtlas; F6V814; baseline. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 2. DR TIGRFAMs; TIGR00604; rad3; 2. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000008143}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Membrane {ECO:0000256|SAM:Phobius}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000008143}; KW Transmembrane {ECO:0000256|SAM:Phobius}; KW Transmembrane helix {ECO:0000256|SAM:Phobius}. FT TRANSMEM 472 494 Helical. {ECO:0000256|SAM:Phobius}. FT TRANSMEM 506 528 Helical. {ECO:0000256|SAM:Phobius}. FT DOMAIN 6 282 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT NON_TER 1 1 {ECO:0000313|Ensembl:ENSXETP00000039540}. SQ SEQUENCE 743 AA; 84845 MW; 8FCDCFC8F0DAEE6F CRC64; RLNIDGLLVY FPYEYIYPEQ YSYMLELKRT LDAKGHGVLE MPSGTGKTVS LLSLIVAYQR AYPLEVTKLI YCSRTVPEIE KVVEELRKLI EYTQAQTGGT LNFMALALSS RRNLCVNPEV SALRFGKEID GRCHSLTASF VRSQKQRDPT VQTCRFFEEF DAIGRETPLP PGIYNLDDLR TLGRQKGWCP YYLARHALGQ CNVVVYSYHY LLDPKIADLV SRELSKKSVV VFDEAHNIDN VCIDSMSVTI TRRTLERCQT NIETLNTAIE KIKETDEKKL KEEYAQLVEG LREASVARET DVYLSNPVLP DEILQEAVPG CIRNALHFLG FLRRLVGYIK SRLRAGHVTQ EGPAAFLRDL YEKVCIERKP MRFCAERLRS LTRTLEIADI TDLSPLTLIT NFATLVSTYT KGFMIIIEPF EDRTPSISNP VLHFSLSESS SNMWLLLKAQ TQAQCTEMAA YTPLLQQKKI KFVAFFLTSA CSLCSVLLLY SATCKQIAVM RNYGNLLLEM SAVVPDGIVG FFTSYLYMEN IVASWYEQGI LENIQRNKLI FIETQDGAET SVALEKYQEA CENGRGAILL SVARGKVSEG IDFVHHYGRA VIMFGVPYVY TQSRILKARL QFLRDQFHLR ENDFLTFDAM RHAAQCVGRA IRGKTDYGIM LFADKRYARS DKRGKLPLWI QEHLTDANLN LTLDESVHLA RHFLRQMAQP FRREDQLGLS LLTLEQLQSE EMLQKIQEIA HQV // ID F6YA33_MOUSE Unreviewed; 684 AA. AC F6YA33; DT 27-JUL-2011, integrated into UniProtKB/TrEMBL. DT 27-JUL-2011, sequence version 1. DT 11-MAY-2016, entry version 34. DE SubName: Full=TFIIH basal transcription factor complex helicase XPD subunit {ECO:0000313|Ensembl:ENSMUSP00000117840}; DE Flags: Fragment; GN Name=Ercc2 {ECO:0000313|Ensembl:ENSMUSP00000117840, GN ECO:0000313|MGI:MGI:95413}; OS Mus musculus (Mouse). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; OC Muroidea; Muridae; Murinae; Mus; Mus. OX NCBI_TaxID=10090 {ECO:0000313|Ensembl:ENSMUSP00000117840, ECO:0000313|Proteomes:UP000000589}; RN [1] {ECO:0000313|Ensembl:ENSMUSP00000117840, ECO:0000313|Proteomes:UP000000589} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=C57BL/6J {ECO:0000313|Ensembl:ENSMUSP00000117840, RC ECO:0000313|Proteomes:UP000000589}; RX PubMed=19468303; DOI=10.1371/journal.pbio.1000112; RA Church D.M., Goodstadt L., Hillier L.W., Zody M.C., Goldstein S., RA She X., Bult C.J., Agarwala R., Cherry J.L., DiCuccio M., Hlavina W., RA Kapustin Y., Meric P., Maglott D., Birtle Z., Marques A.C., Graves T., RA Zhou S., Teague B., Potamousis K., Churas C., Place M., Herschleb J., RA Runnheim R., Forrest D., Amos-Landgraf J., Schwartz D.C., Cheng Z., RA Lindblad-Toh K., Eichler E.E., Ponting C.P.; RT "Lineage-specific biology revealed by a finished genome assembly of RT the mouse."; RL PLoS Biol. 7:E1000112-E1000112(2009). RN [2] {ECO:0000213|PubMed:21183079} RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. RX PubMed=21183079; DOI=10.1016/j.cell.2010.12.001; RA Huttlin E.L., Jedrychowski M.P., Elias J.E., Goswami T., Rad R., RA Beausoleil S.A., Villen J., Haas W., Sowa M.E., Gygi S.P.; RT "A tissue-specific atlas of mouse protein phosphorylation and RT expression."; RL Cell 143:1174-1189(2010). RN [3] {ECO:0000313|Ensembl:ENSMUSP00000117840} RP IDENTIFICATION. RC STRAIN=C57BL/6J {ECO:0000313|Ensembl:ENSMUSP00000117840}; RG Ensembl; RL Submitted (JUN-2011) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an Ensembl CC automatic analysis pipeline and should be considered as CC preliminary data. {ECO:0000313|Ensembl:ENSMUSP00000117840}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AC118017; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR STRING; 10090.ENSMUSP00000054380; -. DR PaxDb; F6YA33; -. DR PRIDE; F6YA33; -. DR Ensembl; ENSMUST00000129249; ENSMUSP00000117840; ENSMUSG00000030400. DR MGI; MGI:95413; Ercc2. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR GeneTree; ENSGT00550000075092; -. DR NextBio; 35558403; -. DR Proteomes; UP000000589; Chromosome 7. DR ExpressionAtlas; F6YA33; baseline and differential. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 1. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 2. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 1: Evidence at protein level; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000000589}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Proteomics identification {ECO:0000213|MaxQB:F6YA33, KW ECO:0000213|PeptideAtlas:F6YA33}; KW Reference proteome {ECO:0000313|Proteomes:UP000000589}. FT DOMAIN 9 207 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT NON_TER 1 1 {ECO:0000313|Ensembl:ENSMUSP00000117840}. SQ SEQUENCE 684 AA; 77999 MW; 0961FAD998859F41 CRC64; XAARLNVDGL LVYFPYDYIY PEQFSYMLEL KRTLDAKGHG VLEMPSGTGK TVSLLALIVA YQRAYPLEVT KLIYCSRTVP EIEKVIEELR KLLSFYEQQE GEKLPFLGLA LSSRKNLCIH PEILHANVVV YSYHYLLDPK IADLVSKELA RKAVVVFDEA HNIDNVCIDS MSVNLTRRTL DRCQSNLDTL QKTVLRIKET DEQRLRDEYR RLVEGLREAS VARETDAHLA NPVLPDEVLQ EAVPGSIRTA EHFLGFLRRL LEYVKWRLRV QHVVQESPPA FLSGLAQRVC IQRKPLRFCA ERLRSLLHTL EIADLADFSP LTLLANFATL VSTYAKGFTI IIEPFDDRTP TIANPVLHFS CMDASLAIKP VFERFQSVII TSGTLSPLDI YPKILDFHPV TMATFTMTLA RVCLCPMIIG RGNDQVAISS KFETREDIAV IRNYGNLLLE MSAVVPDGIV AFFTSYQYME STVASWYEQG ILENIQRNKL LFIETQDGAE TSVALEKYQE ACENGRGAIL LSVARGKVSE GIDFVHHYGR AVIMFGVPYV YTQSRILKAR LEYLRDQFQI RENDFLTFDA MRHAAQCVGR AIRGKTDYGL MVFADKRFAR ADKRGKLPRW IQEHLTDSNL NLTVDEGVQV AKYFLRQMAQ PFHREDQLGL SLLSLEQLQS EETLQRIEQI AQQL // ID F7BIL7_MACMU Unreviewed; 757 AA. AC F7BIL7; DT 27-JUL-2011, integrated into UniProtKB/TrEMBL. DT 27-JUL-2011, sequence version 1. DT 11-MAY-2016, entry version 33. DE SubName: Full=Uncharacterized protein {ECO:0000313|Ensembl:ENSMMUP00000018942}; GN Name=ERCC2 {ECO:0000313|Ensembl:ENSMMUP00000018942}; OS Macaca mulatta (Rhesus macaque). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; OC Catarrhini; Cercopithecidae; Cercopithecinae; Macaca. OX NCBI_TaxID=9544 {ECO:0000313|Ensembl:ENSMMUP00000018942, ECO:0000313|Proteomes:UP000006718}; RN [1] {ECO:0000313|Ensembl:ENSMMUP00000018942, ECO:0000313|Proteomes:UP000006718} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=17573 {ECO:0000313|Ensembl:ENSMMUP00000018942, RC ECO:0000313|Proteomes:UP000006718}; RX PubMed=17431167; DOI=10.1126/science.1139247; RA Gibbs R.A., Rogers J., Katze M.G., Bumgarner R., Weinstock G.M., RA Mardis E.R., Remington K.A., Strausberg R.L., Venter J.C., RA Wilson R.K., Batzer M.A., Bustamante C.D., Eichler E.E., Hahn M.W., RA Hardison R.C., Makova K.D., Miller W., Milosavljevic A., Palermo R.E., RA Siepel A., Sikela J.M., Attaway T., Bell S., Bernard K.E., Buhay C.J., RA Chandrabose M.N., Dao M., Davis C., Delehaunty K.D., Ding Y., RA Dinh H.H., Dugan-Rocha S., Fulton L.A., Gabisi R.A., Garner T.T., RA Godfrey J., Hawes A.C., Hernandez J., Hines S., Holder M., Hume J., RA Jhangiani S.N., Joshi V., Khan Z.M., Kirkness E.F., Cree A., RA Fowler R.G., Lee S., Lewis L.R., Li Z., Liu Y.-S., Moore S.M., RA Muzny D., Nazareth L.V., Ngo D.N., Okwuonu G.O., Pai G., Parker D., RA Paul H.A., Pfannkoch C., Pohl C.S., Rogers Y.-H.C., Ruiz S.J., RA Sabo A., Santibanez J., Schneider B.W., Smith S.M., Sodergren E., RA Svatek A.F., Utterback T.R., Vattathil S., Warren W., White C.S., RA Chinwalla A.T., Feng Y., Halpern A.L., Hillier L.W., Huang X., RA Minx P., Nelson J.O., Pepin K.H., Qin X., Sutton G.G., Venter E., RA Walenz B.P., Wallis J.W., Worley K.C., Yang S.-P., Jones S.M., RA Marra M.A., Rocchi M., Schein J.E., Baertsch R., Clarke L., Csuros M., RA Glasscock J., Harris R.A., Havlak P., Jackson A.R., Jiang H., Liu Y., RA Messina D.N., Shen Y., Song H.X.-Z., Wylie T., Zhang L., Birney E., RA Han K., Konkel M.K., Lee J., Smit A.F.A., Ullmer B., Wang H., Xing J., RA Burhans R., Cheng Z., Karro J.E., Ma J., Raney B., She X., Cox M.J., RA Demuth J.P., Dumas L.J., Han S.-G., Hopkins J., Karimpour-Fard A., RA Kim Y.H., Pollack J.R., Vinar T., Addo-Quaye C., Degenhardt J., RA Denby A., Hubisz M.J., Indap A., Kosiol C., Lahn B.T., Lawson H.A., RA Marklein A., Nielsen R., Vallender E.J., Clark A.G., Ferguson B., RA Hernandez R.D., Hirani K., Kehrer-Sawatzki H., Kolb J., Patil S., RA Pu L.-L., Ren Y., Smith D.G., Wheeler D.A., Schenck I., Ball E.V., RA Chen R., Cooper D.N., Giardine B., Hsu F., Kent W.J., Lesk A., RA Nelson D.L., O'brien W.E., Pruefer K., Stenson P.D., Wallace J.C., RA Ke H., Liu X.-M., Wang P., Xiang A.P., Yang F., Barber G.P., RA Haussler D., Karolchik D., Kern A.D., Kuhn R.M., Smith K.E., RA Zwieg A.S.; RT "Evolutionary and biomedical insights from the rhesus macaque RT genome."; RL Science 316:222-234(2007). RN [2] {ECO:0000313|Ensembl:ENSMMUP00000018942} RP IDENTIFICATION. RC STRAIN=17573 {ECO:0000313|Ensembl:ENSMMUP00000018942}; RG Ensembl; RL Submitted (JUL-2011) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an Ensembl CC automatic analysis pipeline and should be considered as CC preliminary data. {ECO:0000313|Ensembl:ENSMMUP00000018942}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR STRING; 9544.ENSMMUP00000018942; -. DR Ensembl; ENSMMUT00000020235; ENSMMUP00000018942; ENSMMUG00000014419. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR GeneTree; ENSGT00550000075092; -. DR InParanoid; F7BIL7; -. DR OMA; KICPYFL; -. DR OrthoDB; EOG70W3CM; -. DR TreeFam; TF101232; -. DR Proteomes; UP000006718; Chromosome 19. DR GO; GO:0019907; C:cyclin-dependent protein kinase activating kinase holoenzyme complex; IEA:Ensembl. DR GO; GO:0005737; C:cytoplasm; IEA:Ensembl. DR GO; GO:0005675; C:holo TFIIH complex; IEA:Ensembl. DR GO; GO:0071817; C:MMXD complex; IEA:Ensembl. DR GO; GO:0043139; F:5'-3' DNA helicase activity; IEA:Ensembl. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0008353; F:RNA polymerase II carboxy-terminal domain kinase activity; IEA:Ensembl. DR GO; GO:0007568; P:aging; IEA:Ensembl. DR GO; GO:0006915; P:apoptotic process; IEA:Ensembl. DR GO; GO:0030282; P:bone mineralization; IEA:Ensembl. DR GO; GO:0008283; P:cell proliferation; IEA:Ensembl. DR GO; GO:0032289; P:central nervous system myelin formation; IEA:Ensembl. DR GO; GO:0007059; P:chromosome segregation; IEA:Ensembl. DR GO; GO:0040016; P:embryonic cleavage; IEA:Ensembl. DR GO; GO:0043249; P:erythrocyte maturation; IEA:Ensembl. DR GO; GO:0030198; P:extracellular matrix organization; IEA:Ensembl. DR GO; GO:0035315; P:hair cell differentiation; IEA:Ensembl. DR GO; GO:0048820; P:hair follicle maturation; IEA:Ensembl. DR GO; GO:0060218; P:hematopoietic stem cell differentiation; IEA:Ensembl. DR GO; GO:0001701; P:in utero embryonic development; IEA:Ensembl. DR GO; GO:0035264; P:multicellular organism growth; IEA:Ensembl. DR GO; GO:0033683; P:nucleotide-excision repair, DNA incision; IEA:Ensembl. DR GO; GO:0043388; P:positive regulation of DNA binding; IEA:Ensembl. DR GO; GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IEA:Ensembl. DR GO; GO:0009791; P:post-embryonic development; IEA:Ensembl. DR GO; GO:1901990; P:regulation of mitotic cell cycle phase transition; IEA:Ensembl. DR GO; GO:0006979; P:response to oxidative stress; IEA:Ensembl. DR GO; GO:0021510; P:spinal cord development; IEA:Ensembl. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:Ensembl. DR GO; GO:0006283; P:transcription-coupled nucleotide-excision repair; IEA:Ensembl. DR GO; GO:0009650; P:UV protection; IEA:Ensembl. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 2. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000006718}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000006718}. FT DOMAIN 6 282 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 76 99 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 757 AA; 86756 MW; 9D8075C4BE32BCF8 CRC64; RLNVDGLLVY FPYDYIYPEQ FSYMRELKRT LDAKGHGVLE MPSGTGKTVS LLALIMAYQR AYPLEVTKLI YCSRTVPEIE KVIEELRKLL NFYEKQEGEK LPFLGLALSS RKNLCIHPEV TPLRFGKDVD GKCHSLTASY VRAQYQHDTS LPHCRFYEEF DAHGREVPLP AGIYNLDDLK ALGRRQGWCP YFLARYSILH ANVVVYSYHY LLDPKIADLV SKELARKAVV VFDEAHNIDN VCIDSMSVNL TRRTLDRCQG NLETLQKTVL RIKETDEQRL RDEYRRLVEG LREASAARET DAHLANPLPD EVLQEAVPGS IRTAEHFLGF LRRLLEYVKW RLRVQHVVQE SPPAFLSGLA QRVCIQRKPL RFCAERLRSL LHTLEITDLA DFSPLTLLAN FATLVSTYAK GFTIIIEPFD DRTPTIANPI LHFSCMDASL AIKPVFERFQ SVIITSGTLS PLDIYPKILD FHPVTMATFT MTLARVCLCP MIIGRGNDQV AISSKFETRE DIAVIRNYGN LLLEMSAVVP DGIVAFFTSY QYMESTVASW YEQGILENIQ RNKLLFIETQ DGAETSVALE KYQEVGNGRG AVRLSWARVK PSDGIHFMHH YGRAVIMFGV PYVYTQSRIL KARLEYLRDQ FQIRENDFLT FDAMRHAAQC VGRAIRGKTD YGLMVFADKR FARGDKRGKL PRWIQEHLTD ANLNLTVDEG VQVAKYFLRQ MAQPFHREDQ LGLSLLSLEQ LESEETLQRI EQIAQQL // ID F7DF10_MONDO Unreviewed; 761 AA. AC F7DF10; DT 27-JUL-2011, integrated into UniProtKB/TrEMBL. DT 27-JUL-2011, sequence version 1. DT 11-MAY-2016, entry version 34. DE SubName: Full=Uncharacterized protein {ECO:0000313|Ensembl:ENSMODP00000026921}; DE Flags: Fragment; GN Name=ERCC2 {ECO:0000313|Ensembl:ENSMODP00000026921}; OS Monodelphis domestica (Gray short-tailed opossum). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis. OX NCBI_TaxID=13616 {ECO:0000313|Ensembl:ENSMODP00000026921, ECO:0000313|Proteomes:UP000002280}; RN [1] {ECO:0000313|Ensembl:ENSMODP00000026921, ECO:0000313|Proteomes:UP000002280} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RX PubMed=17495919; DOI=10.1038/nature05805; RA Mikkelsen T.S., Wakefield M.J., Aken B., Amemiya C.T., Chang J.L., RA Duke S., Garber M., Gentles A.J., Goodstadt L., Heger A., Jurka J., RA Kamal M., Mauceli E., Searle S.M., Sharpe T., Baker M.L., Batzer M.A., RA Benos P.V., Belov K., Clamp M., Cook A., Cuff J., Das R., Davidow L., RA Deakin J.E., Fazzari M.J., Glass J.L., Grabherr M., Greally J.M., RA Gu W., Hore T.A., Huttley G.A., Kleber M., Jirtle R.L., Koina E., RA Lee J.T., Mahony S., Marra M.A., Miller R.D., Nicholls R.D., Oda M., RA Papenfuss A.T., Parra Z.E., Pollock D.D., Ray D.A., Schein J.E., RA Speed T.P., Thompson K., VandeBerg J.L., Wade C.M., Walker J.A., RA Waters P.D., Webber C., Weidman J.R., Xie X., Zody M.C., Baldwin J., RA Abdouelleil A., Abdulkadir J., Abebe A., Abera B., Abreu J., RA Acer S.C., Aftuck L., Alexander A., An P., Anderson E., Anderson S., RA Arachi H., Azer M., Bachantsang P., Barry A., Bayul T., Berlin A., RA Bessette D., Bloom T., Bloom T., Boguslavskiy L., Bonnet C., RA Boukhgalter B., Bourzgui I., Brown A., Cahill P., Channer S., RA Cheshatsang Y., Chuda L., Citroen M., Collymore A., Cooke P., RA Costello M., D'Aco K., Daza R., De Haan G., DeGray S., DeMaso C., RA Dhargay N., Dooley K., Dooley E., Doricent M., Dorje P., Dorjee K., RA Dupes A., Elong R., Falk J., Farina A., Faro S., Ferguson D., RA Fisher S., Foley C.D., Franke A., Friedrich D., Gadbois L., Gearin G., RA Gearin C.R., Giannoukos G., Goode T., Graham J., Grandbois E., RA Grewal S., Gyaltsen K., Hafez N., Hagos B., Hall J., Henson C., RA Hollinger A., Honan T., Huard M.D., Hughes L., Hurhula B., Husby M.E., RA Kamat A., Kanga B., Kashin S., Khazanovich D., Kisner P., Lance K., RA Lara M., Lee W., Lennon N., Letendre F., LeVine R., Lipovsky A., RA Liu X., Liu J., Liu S., Lokyitsang T., Lokyitsang Y., Lubonja R., RA Lui A., MacDonald P., Magnisalis V., Maru K., Matthews C., RA McCusker W., McDonough S., Mehta T., Meldrim J., Meneus L., Mihai O., RA Mihalev A., Mihova T., Mittelman R., Mlenga V., Montmayeur A., RA Mulrain L., Navidi A., Naylor J., Negash T., Nguyen T., Nguyen N., RA Nicol R., Norbu C., Norbu N., Novod N., O'Neill B., Osman S., RA Markiewicz E., Oyono O.L., Patti C., Phunkhang P., Pierre F., RA Priest M., Raghuraman S., Rege F., Reyes R., Rise C., Rogov P., RA Ross K., Ryan E., Settipalli S., Shea T., Sherpa N., Shi L., Shih D., RA Sparrow T., Spaulding J., Stalker J., Stange-Thomann N., RA Stavropoulos S., Stone C., Strader C., Tesfaye S., Thomson T., RA Thoulutsang Y., Thoulutsang D., Topham K., Topping I., Tsamla T., RA Vassiliev H., Vo A., Wangchuk T., Wangdi T., Weiand M., Wilkinson J., RA Wilson A., Yadav S., Young G., Yu Q., Zembek L., Zhong D., Zimmer A., RA Zwirko Z., Jaffe D.B., Alvarez P., Brockman W., Butler J., Chin C., RA Gnerre S., MacCallum I., Graves J.A., Ponting C.P., Breen M., RA Samollow P.B., Lander E.S., Lindblad-Toh K.; RT "Genome of the marsupial Monodelphis domestica reveals innovation in RT non-coding sequences."; RL Nature 447:167-177(2007). RN [2] {ECO:0000313|Ensembl:ENSMODP00000026921} RP IDENTIFICATION. RG Ensembl; RL Submitted (JUL-2011) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an Ensembl CC automatic analysis pipeline and should be considered as CC preliminary data. {ECO:0000313|Ensembl:ENSMODP00000026921}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR STRING; 13616.ENSMODP00000026921; -. DR Ensembl; ENSMODT00000027403; ENSMODP00000026921; ENSMODG00000021549. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR GeneTree; ENSGT00550000075092; -. DR InParanoid; F7DF10; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG70W3CM; -. DR TreeFam; TF101232; -. DR Proteomes; UP000002280; Chromosome 4. DR GO; GO:0019907; C:cyclin-dependent protein kinase activating kinase holoenzyme complex; IEA:Ensembl. DR GO; GO:0005737; C:cytoplasm; IEA:Ensembl. DR GO; GO:0005675; C:holo TFIIH complex; IEA:Ensembl. DR GO; GO:0071817; C:MMXD complex; IEA:Ensembl. DR GO; GO:0043139; F:5'-3' DNA helicase activity; IEA:Ensembl. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0008353; F:RNA polymerase II carboxy-terminal domain kinase activity; IEA:Ensembl. DR GO; GO:0007568; P:aging; IEA:Ensembl. DR GO; GO:0006915; P:apoptotic process; IEA:Ensembl. DR GO; GO:0030282; P:bone mineralization; IEA:Ensembl. DR GO; GO:0008283; P:cell proliferation; IEA:Ensembl. DR GO; GO:0032289; P:central nervous system myelin formation; IEA:Ensembl. DR GO; GO:0007059; P:chromosome segregation; IEA:Ensembl. DR GO; GO:0040016; P:embryonic cleavage; IEA:Ensembl. DR GO; GO:0043249; P:erythrocyte maturation; IEA:Ensembl. DR GO; GO:0030198; P:extracellular matrix organization; IEA:Ensembl. DR GO; GO:0035315; P:hair cell differentiation; IEA:Ensembl. DR GO; GO:0048820; P:hair follicle maturation; IEA:Ensembl. DR GO; GO:0060218; P:hematopoietic stem cell differentiation; IEA:Ensembl. DR GO; GO:0001701; P:in utero embryonic development; IEA:Ensembl. DR GO; GO:0035264; P:multicellular organism growth; IEA:Ensembl. DR GO; GO:0033683; P:nucleotide-excision repair, DNA incision; IEA:Ensembl. DR GO; GO:0043388; P:positive regulation of DNA binding; IEA:Ensembl. DR GO; GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IEA:Ensembl. DR GO; GO:0009791; P:post-embryonic development; IEA:Ensembl. DR GO; GO:1901990; P:regulation of mitotic cell cycle phase transition; IEA:Ensembl. DR GO; GO:0006979; P:response to oxidative stress; IEA:Ensembl. DR GO; GO:0021510; P:spinal cord development; IEA:Ensembl. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:Ensembl. DR GO; GO:0006283; P:transcription-coupled nucleotide-excision repair; IEA:Ensembl. DR GO; GO:0009650; P:UV protection; IEA:Ensembl. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000002280}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000002280}. FT DOMAIN 7 284 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 77 100 {ECO:0000256|SAM:Coils}. FT NON_TER 1 1 {ECO:0000313|Ensembl:ENSMODP00000026921}. SQ SEQUENCE 761 AA; 86939 MW; DD742FD7B870477B CRC64; LRLNVDGLLV HFPYDYIYPE QFSYMLELKR TLDAKGHGVL EMPSGTGKTI SLLALIVAYQ RVHPLEVTKL IYCSRTVPEI EKVIEELRKL MNSFEKQEGE KVPFLGLALS SRKNLCIHPE VTPLRFGKDV DGKCHSLTAS YVRAQRQQDS SVPHCRFYEE FDAQGRQMPI PWGIYNLDDL KAFGRQKGWC PYFLARYSIL HANVIVYSYH YLLDPKIADL VSKELARKAV VVFDEAHNID NVCIDSMSVN LTRRTLDRCQ NNLEYAAAHG SQVIKETDEK RLREEYRRLV EGLREASVAR ETDAHLANPV LPDEVLQEAV PGSIRTAEHF LGFLRRLLEY VKWRLRTQHV VQESPPAFLG GLAHRVCIQR KPLRFCAERL RSLLHTLEIA DLADFSPLTL LSNFATLVST YSRGFTIIIE PFDERTPTIA NPVLHFSCMD ASLAIKPVFE RFQSVIITSG TLSPLEIYPK ILDFHPVTMA TFTMTLARVC LCPMIVGRGN DQVAISSKFE TREDIAVIRN YGNLLLEMSA VVPDGIVAFF TSYQYMESTV AAWYEQGILE NIQRNKLLFI ETQDGAETSV ALEKYQEACE NGRGAILLSV ARGKVSEGID FVHHYGRAVI MFGVPYVYTQ SRILKARLEF LRDQFQIREN DFLTFDAMRH AAQCVGRAIR GKTDYGLMVF ADKRFARADK RGKLPRWIQE HLTDANLNLT VDEGVQVAKY FLRQMAQPFH REDQLGLSLL SLEQLQSEET LRRIEQIAQQ L // ID F7DGB1_XENTR Unreviewed; 759 AA. AC F7DGB1; DT 27-JUL-2011, integrated into UniProtKB/TrEMBL. DT 27-JUL-2011, sequence version 1. DT 11-MAY-2016, entry version 35. DE SubName: Full=Uncharacterized protein {ECO:0000313|Ensembl:ENSXETP00000060145}; DE Flags: Fragment; GN Name=ercc2 {ECO:0000313|Ensembl:ENSXETP00000060145}; OS Xenopus tropicalis (Western clawed frog) (Silurana tropicalis). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; OC Silurana. OX NCBI_TaxID=8364 {ECO:0000313|Ensembl:ENSXETP00000060145, ECO:0000313|Proteomes:UP000008143}; RN [1] {ECO:0000313|Ensembl:ENSXETP00000060145} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RX PubMed=20431018; DOI=10.1126/science.1183670; RA Hellsten U., Harland R.M., Gilchrist M.J., Hendrix D., Jurka J., RA Kapitonov V., Ovcharenko I., Putnam N.H., Shu S., Taher L., RA Blitz I.L., Blumberg B., Dichmann D.S., Dubchak I., Amaya E., RA Detter J.C., Fletcher R., Gerhard D.S., Goodstein D., Graves T., RA Grigoriev I.V., Grimwood J., Kawashima T., Lindquist E., Lucas S.M., RA Mead P.E., Mitros T., Ogino H., Ohta Y., Poliakov A.V., Pollet N., RA Robert J., Salamov A., Sater A.K., Schmutz J., Terry A., Vize P.D., RA Warren W.C., Wells D., Wills A., Wilson R.K., Zimmerman L.B., RA Zorn A.M., Grainger R., Grammer T., Khokha M.K., Richardson P.M., RA Rokhsar D.S.; RT "The genome of the Western clawed frog Xenopus tropicalis."; RL Science 328:633-636(2010). RN [2] {ECO:0000313|Ensembl:ENSXETP00000060145} RP IDENTIFICATION. RG Ensembl; RL Submitted (JUN-2011) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an Ensembl CC automatic analysis pipeline and should be considered as CC preliminary data. {ECO:0000313|Ensembl:ENSXETP00000060145}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AAMC01014546; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AAMC01014547; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR STRING; 8364.ENSXETP00000060145; -. DR PaxDb; F7DGB1; -. DR Ensembl; ENSXETT00000063575; ENSXETP00000060145; ENSXETG00000018229. DR Xenbase; XB-GENE-949792; ercc2. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR GeneTree; ENSGT00550000075092; -. DR InParanoid; F7DGB1; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG70W3CM; -. DR TreeFam; TF101232; -. DR Reactome; R-XTR-112382; Formation of RNA Pol II elongation complex. DR Reactome; R-XTR-113418; Formation of the Early Elongation Complex. DR Reactome; R-XTR-5696395; Formation of Incision Complex in GG-NER. DR Reactome; R-XTR-5696400; Dual Incision in GG-NER. DR Reactome; R-XTR-674695; RNA Polymerase II Pre-transcription Events. DR Reactome; R-XTR-6781823; Formation of TC-NER Pre-Incision Complex. DR Reactome; R-XTR-6782135; Dual incision in TC-NER. DR Reactome; R-XTR-6782210; Gap-filling DNA repair synthesis and ligation in TC-NER. DR Reactome; R-XTR-72086; mRNA Capping. DR Reactome; R-XTR-73762; RNA Polymerase I Transcription Initiation. DR Reactome; R-XTR-73772; RNA Polymerase I Promoter Escape. DR Reactome; R-XTR-73776; RNA Polymerase II Promoter Escape. DR Reactome; R-XTR-73777; RNA Polymerase I Chain Elongation. DR Reactome; R-XTR-73779; RNA Polymerase II Transcription Pre-Initiation And Promoter Opening. DR Reactome; R-XTR-73863; RNA Polymerase I Transcription Termination. DR Reactome; R-XTR-75953; RNA Polymerase II Transcription Initiation. DR Reactome; R-XTR-75955; RNA Polymerase II Transcription Elongation. DR Reactome; R-XTR-76042; RNA Polymerase II Transcription Initiation And Promoter Clearance. DR Reactome; R-XTR-77075; RNA Pol II CTD phosphorylation and interaction with CE. DR Proteomes; UP000008143; Unassembled WGS sequence. DR ExpressionAtlas; F7DGB1; baseline. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 2. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000008143}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Membrane {ECO:0000256|SAM:Phobius}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000008143}; KW Transmembrane {ECO:0000256|SAM:Phobius}; KW Transmembrane helix {ECO:0000256|SAM:Phobius}. FT TRANSMEM 433 462 Helical. {ECO:0000256|SAM:Phobius}. FT TRANSMEM 482 506 Helical. {ECO:0000256|SAM:Phobius}. FT DOMAIN 8 284 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT NON_TER 1 1 {ECO:0000313|Ensembl:ENSXETP00000060145}. SQ SEQUENCE 759 AA; 86692 MW; 8496C1EE0812ADBE CRC64; SARLNIDGLL VYFPYEYIYP EQYSYMLELK RTLDAKGHGV LEMPSGTGKT VSLLSLIVAY QRAYPLEVTK LIYCSRTVPE IEKVVEELRK LIEYTQAQTG GTLNFMALAL SSRRNLCVNP EVSALRFGKE IDGRCHSLTA SFVRSQKQRD PTVQTCRFFE EFDAIGRETP LPPGIYNLDD LRTLGRQKGW CPYYLARHAL GQCNVVVYSY HYLLDPKIAD LVSRELSKKS VVVFDEAHNI DNVCIDSMSV TITRRTLERC QTNIETLNTA IEKIKETDEK KLKEEYAQLV EGLREASVAR ETDVYLSNPV LPDEILQEAV PGCIRNALHF LGFLRRLVGY IKSRLRAGHV TQEGPAAFLR DLYEKVCIER KPMRFCAERL RSLTRTLEIA DITDLSPLTL ITNFATLVST YTKGFMIIIE PFEDRTPSIS NPVLHFSLIC PSVLFFPISY FLPIFGLISF FLARRNDFLP LIPLSTHTFI QLFFKIQICT CIATSACSLC SVLLLYSATC KQIAVMRNYG NLLLEMSAVV PDGIVGFFTS YLYMENIVAS WYEQGILENI QRNKLIFIET QDGAETSVAL EKYQEACENG RGAILLSVAR GKVSEGIDFV HHYGRAVIMF GVPYVYTQSR ILKARLQFLR DQFHLRENDF LTFDAMRHAA QCVGRAIRGK TDYGIMLFAD KRYARSDKRG KLPLWIQEHL TDANLNLTLD ESVHLARHFL RQMAQPFRRE DQLGLSLLTL EQLQSEEMLQ KIQEIAHQV // ID F7I419_CALJA Unreviewed; 760 AA. AC F7I419; DT 27-JUL-2011, integrated into UniProtKB/TrEMBL. DT 27-JUL-2011, sequence version 1. DT 11-MAY-2016, entry version 34. DE SubName: Full=Uncharacterized protein {ECO:0000313|Ensembl:ENSCJAP00000023359}; GN Name=ERCC2 {ECO:0000313|Ensembl:ENSCJAP00000023359}; OS Callithrix jacchus (White-tufted-ear marmoset). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; OC Platyrrhini; Cebidae; Callitrichinae; Callithrix. OX NCBI_TaxID=9483 {ECO:0000313|Ensembl:ENSCJAP00000023359, ECO:0000313|Proteomes:UP000008225}; RN [1] {ECO:0000313|Ensembl:ENSCJAP00000023359, ECO:0000313|Proteomes:UP000008225} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RA Warren W., Ye L., Minx P., Worley K., Gibbs R., Wilson R.K.; RL Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases. RN [2] {ECO:0000313|Ensembl:ENSCJAP00000023359} RP IDENTIFICATION. RG Ensembl; RL Submitted (JUN-2011) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an Ensembl CC automatic analysis pipeline and should be considered as CC preliminary data. {ECO:0000313|Ensembl:ENSCJAP00000023359}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ACFV01108623; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; ACFV01108624; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; ACFV01108625; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; ACFV01108626; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR RefSeq; XP_002762284.1; XM_002762238.2. DR STRING; 9483.ENSCJAP00000023359; -. DR Ensembl; ENSCJAT00000024715; ENSCJAP00000023359; ENSCJAG00000012716. DR GeneID; 100407061; -. DR KEGG; cjc:100407061; -. DR CTD; 2068; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR GeneTree; ENSGT00550000075092; -. DR InParanoid; F7I419; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR TreeFam; TF101232; -. DR Proteomes; UP000008225; Chromosome 22. DR GO; GO:0019907; C:cyclin-dependent protein kinase activating kinase holoenzyme complex; IEA:Ensembl. DR GO; GO:0005737; C:cytoplasm; IEA:Ensembl. DR GO; GO:0005675; C:holo TFIIH complex; IEA:Ensembl. DR GO; GO:0071817; C:MMXD complex; IEA:Ensembl. DR GO; GO:0043139; F:5'-3' DNA helicase activity; IEA:Ensembl. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0008353; F:RNA polymerase II carboxy-terminal domain kinase activity; IEA:Ensembl. DR GO; GO:0007568; P:aging; IEA:Ensembl. DR GO; GO:0006915; P:apoptotic process; IEA:Ensembl. DR GO; GO:0030282; P:bone mineralization; IEA:Ensembl. DR GO; GO:0008283; P:cell proliferation; IEA:Ensembl. DR GO; GO:0032289; P:central nervous system myelin formation; IEA:Ensembl. DR GO; GO:0007059; P:chromosome segregation; IEA:Ensembl. DR GO; GO:0040016; P:embryonic cleavage; IEA:Ensembl. DR GO; GO:0043249; P:erythrocyte maturation; IEA:Ensembl. DR GO; GO:0030198; P:extracellular matrix organization; IEA:Ensembl. DR GO; GO:0035315; P:hair cell differentiation; IEA:Ensembl. DR GO; GO:0048820; P:hair follicle maturation; IEA:Ensembl. DR GO; GO:0060218; P:hematopoietic stem cell differentiation; IEA:Ensembl. DR GO; GO:0001701; P:in utero embryonic development; IEA:Ensembl. DR GO; GO:0035264; P:multicellular organism growth; IEA:Ensembl. DR GO; GO:0033683; P:nucleotide-excision repair, DNA incision; IEA:Ensembl. DR GO; GO:0043388; P:positive regulation of DNA binding; IEA:Ensembl. DR GO; GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IEA:Ensembl. DR GO; GO:0009791; P:post-embryonic development; IEA:Ensembl. DR GO; GO:1901990; P:regulation of mitotic cell cycle phase transition; IEA:Ensembl. DR GO; GO:0006979; P:response to oxidative stress; IEA:Ensembl. DR GO; GO:0021510; P:spinal cord development; IEA:Ensembl. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:Ensembl. DR GO; GO:0006283; P:transcription-coupled nucleotide-excision repair; IEA:Ensembl. DR GO; GO:0009650; P:UV protection; IEA:Ensembl. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000008225}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000008225}. FT DOMAIN 7 283 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 77 100 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 760 AA; 86940 MW; A41C0481971B2A88 CRC64; MKLNVDGLLV YFPYDYIYPE QFSYMRELKR TLDAKGHGVL EMPSGTGKTV SLLALIMAYQ RAYPLEVTKL IYCSRTVPEI EKVIEELRKL LNFYEKQEGE KLPFLGLALS SRKNLCIHPE VTPLRFGKDV DGKCHSLTAS YVRAQYQHDT SLPHCRFYEE FDTHGREVPL PPGIYNLDDL KALGRHQGWC PYFLARYSIL HANVVVYSYH YLLDPKIADL VSKELARKAV VVFDEAHNID NVCIDSMSVN LTRRTLDRCQ GNLETLQKTV LRIKETDEQR LRDEYRRLVE GLREASAARE TDAHLANPVL PDEVLQEAVP GSIRTAEHFL GFLRRLLEYV KWRLRVQHVV QESPPAFLSG LAQRVCIQRK PLRFCAERLR SLLHTLEITD LADFSPLTLL ANFATLVSTY AKGFTIIIEP FDDRTPTIAN PILHFSCMDA SLAIKPVFER FQSVIITSGT LSPLDIYPKI LDFHPVTMAT FTMTLARVCL CPMIIGRGND QVAISSKFET REDIAVIRNY GNLLLEMSAV VPDGIVAFFT SYQYMESTVA SWYEQGILEN IQRNKLLFIE TQDGAETSVA LEKYQEACEN GRGAILLSVA RGKVSEGIDF VHHYGRAVIM FGVPYVYTQS HILKARLEYL RDQFQIREND FLTFDAMRHA AQCVGRAIRG KTDYGLMVFA DKRFARADKR GKLPRWIQEH LTDANLNLTV DEGVQVAKYF LRQMAQPFHR EDQLGLSLLS LEQLESQETL QRIEQIAQQL // ID F7I423_CALJA Unreviewed; 681 AA. AC F7I423; DT 27-JUL-2011, integrated into UniProtKB/TrEMBL. DT 27-JUL-2011, sequence version 1. DT 11-MAY-2016, entry version 26. DE SubName: Full=Uncharacterized protein {ECO:0000313|Ensembl:ENSCJAP00000023357}; DE Flags: Fragment; GN Name=ERCC2 {ECO:0000313|Ensembl:ENSCJAP00000023357}; OS Callithrix jacchus (White-tufted-ear marmoset). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; OC Platyrrhini; Cebidae; Callitrichinae; Callithrix. OX NCBI_TaxID=9483 {ECO:0000313|Ensembl:ENSCJAP00000023357, ECO:0000313|Proteomes:UP000008225}; RN [1] {ECO:0000313|Ensembl:ENSCJAP00000023357, ECO:0000313|Proteomes:UP000008225} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RA Warren W., Ye L., Minx P., Worley K., Gibbs R., Wilson R.K.; RL Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases. RN [2] {ECO:0000313|Ensembl:ENSCJAP00000023357} RP IDENTIFICATION. RG Ensembl; RL Submitted (JUN-2011) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an Ensembl CC automatic analysis pipeline and should be considered as CC preliminary data. {ECO:0000313|Ensembl:ENSCJAP00000023357}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ACFV01108623; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; ACFV01108624; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; ACFV01108625; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; ACFV01108626; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR Ensembl; ENSCJAT00000024712; ENSCJAP00000023357; ENSCJAG00000012716. DR GeneTree; ENSGT00550000075092; -. DR OrthoDB; EOG70W3CM; -. DR Proteomes; UP000008225; Chromosome 22. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 1. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 2. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 3. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000008225}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000008225}. FT DOMAIN 6 204 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 76 99 {ECO:0000256|SAM:Coils}. FT NON_TER 1 1 {ECO:0000313|Ensembl:ENSCJAP00000023357}. SQ SEQUENCE 681 AA; 77813 MW; 7F255C479C044AD4 CRC64; RLNVDGLLVY FPYDYIYPEQ FSYMRELKRT LDAKGHGVLE MPSGTGKTVS LLALIMAYQR AYPLEVTKLI YCSRTVPEIE KVIEELRKLL NFYEKQEGEK LPFLGLALSS RKNLCIHPEI LHANVVVYSY HYLLDPKIAD LVSKELARKA VVVFDEAHNI DNVCIDSMSV NLTRRTLDRC QGNLETLQKT VLRIKETDEQ RLRDEYRRLV EGLREASAAR ETDAHLANPV LPDEVLQEAV PGSIRTAEHF LGFLRRLLEY VKWRLRVQHV VQESPPAFLS GLAQRVCIQR KPLRFCAERL RSLLHTLEIT DLADFSPLTL LANFATLVST YAKGFTIIIE PFDDRTPTIA NPILHFSCMD ASLAIKPVFE RFQSVIITSG TLSPLDIYPK ILDFHPVTMA TFTMTLARVC LCPMIIGRGN DQVAISSKFE TREDIAVIRN YGNLLLEMSA VVPDGIVAFF TSYQYMESTV ASWYEQGILE NIQRNKLLFI ETQDGAETSV ALEKYQEACE NGRGAILLSV ARGKVSEGID FVHHYGRAVI MFGVPYVYTQ SHILKARLEY LRDQFQIREN DFLTFDAMRH AAQCVGRAIR GKTDYGLMVF ADKRFARADK RGKLPRWIQE HLTDANLNLT VDEGVQVAKY FLRQMAQPFH REDQLGLSLL SLEQLESQET LQRIEQIAQQ L // ID F7I6F0_CALJA Unreviewed; 449 AA. AC F7I6F0; DT 27-JUL-2011, integrated into UniProtKB/TrEMBL. DT 27-JUL-2011, sequence version 1. DT 11-MAY-2016, entry version 23. DE SubName: Full=Uncharacterized protein {ECO:0000313|Ensembl:ENSCJAP00000023347}; DE Flags: Fragment; GN Name=ERCC2 {ECO:0000313|Ensembl:ENSCJAP00000023347}; OS Callithrix jacchus (White-tufted-ear marmoset). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; OC Platyrrhini; Cebidae; Callitrichinae; Callithrix. OX NCBI_TaxID=9483 {ECO:0000313|Ensembl:ENSCJAP00000023347, ECO:0000313|Proteomes:UP000008225}; RN [1] {ECO:0000313|Ensembl:ENSCJAP00000023347, ECO:0000313|Proteomes:UP000008225} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RA Warren W., Ye L., Minx P., Worley K., Gibbs R., Wilson R.K.; RL Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases. RN [2] {ECO:0000313|Ensembl:ENSCJAP00000023347} RP IDENTIFICATION. RG Ensembl; RL Submitted (JUL-2011) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00051130}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00556201}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00051146}. CC -!- CAUTION: The sequence shown here is derived from an Ensembl CC automatic analysis pipeline and should be considered as CC preliminary data. {ECO:0000313|Ensembl:ENSCJAP00000023347}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ACFV01108623; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; ACFV01108624; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; ACFV01108625; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; ACFV01108626; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR STRING; 9483.ENSCJAP00000023359; -. DR Ensembl; ENSCJAT00000024701; ENSCJAP00000023347; ENSCJAG00000012716. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR GeneTree; ENSGT00550000075092; -. DR Proteomes; UP000008225; Chromosome 22. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00491; HELICc2; 1. DR TIGRFAMs; TIGR00604; rad3; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00442371}; KW Complete proteome {ECO:0000313|Proteomes:UP000008225}; KW Helicase {ECO:0000256|SAAS:SAAS00442371}; KW Hydrolase {ECO:0000256|SAAS:SAAS00442371}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00442371}; KW Nucleus {ECO:0000256|SAAS:SAAS00442313}; KW Reference proteome {ECO:0000313|Proteomes:UP000008225}. FT DOMAIN 231 375 HELICc2. {ECO:0000259|SMART:SM00491}. FT NON_TER 1 1 {ECO:0000313|Ensembl:ENSCJAP00000023347}. SQ SEQUENCE 449 AA; 50554 MW; 427E63006F94F1BE CRC64; VQQWLCVTCR CTAWGCQFPK QGWCPASPRP GRQARDCHDG GGRAAGPVRV SICPPPPSVP TRFCAERLRS LLHTLEITDL ADFSPLTLLA NFATLVSTYA KGFTIIIEPF DDRTPTIANP ILHFSCMDAS LAIKPVFERF QSVIITSGTL SPLDIYPKIL DFHPVTMATF TMTLARVCLC PMIIGRGNDQ VAISSKFETR EDIAVIRNYG NLLLEMSAVV PDGIVAFFTS YQYMESTVAS WYEQGILENI QRNKLLFIET QDGAETSVAL EKYQEACENG RGAILLSVAR GKVSEGIDFV HHYGRAVIMF GVPYVYTQSH ILKARLEYLR DQFQIRENDF LTFDAMRHAA QCVGRAIRGK TDYGLMVFAD KRFARADKRG KLPRWIQEHL TDANLNLTVD EGVQVAKYFL RQMAQPFHRE DQLGLSLLSL EQLESQETLQ RIEQIAQQL // ID F7VPC3_SORMK Unreviewed; 806 AA. AC F7VPC3; DT 21-SEP-2011, integrated into UniProtKB/TrEMBL. DT 21-SEP-2011, sequence version 1. DT 11-MAY-2016, entry version 28. DE SubName: Full=WGS project CABT00000000 data, contig 2.3 {ECO:0000313|EMBL:CCC07351.1}; GN ORFNames=SMAC_02358 {ECO:0000313|EMBL:CCC07351.1}; OS Sordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / OS K-hell). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; OC Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; OC Sordaria. OX NCBI_TaxID=771870 {ECO:0000313|EMBL:CCC07351.1, ECO:0000313|Proteomes:UP000001881}; RN [1] {ECO:0000313|EMBL:CCC07351.1, ECO:0000313|Proteomes:UP000001881} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC MYA-333 / DSM 997 / K(L3346) / K-hell RC {ECO:0000313|Proteomes:UP000001881}; RC TISSUE=Mycelium {ECO:0000313|EMBL:CCC07351.1}; RX PubMed=20386741; DOI=10.1371/journal.pgen.1000891; RA Nowrousian M., Stajich J., Chu M., Engh I., Espagne E., Halliday K., RA Kamerewerd J., Kempken F., Knab B., Kuo H.C., Osiewacz H.D., RA Poeggeler S., Read N., Seiler S., Smith K., Zickler D., Kueck U., RA Freitag M.; RT "De novo assembly of a 40 Mb eukaryotic genome from short sequence RT reads: Sordaria macrospora, a model organism for fungal RT morphogenesis."; RL PLoS Genet. 6:E1000891-E1000891(2010). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:CCC07351.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CABT02000003; CCC07351.1; -; Genomic_DNA. DR STRING; 771870.XP_003350687.1; -. DR EnsemblFungi; CCC07351; CCC07351; SMAC_02358. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; F7VPC3; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000001881; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000001881}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000001881}. FT DOMAIN 7 282 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 742 791 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 806 AA; 92938 MW; 65B2C32CEC451502 CRC64; MEFNIDDLPV LFPYPRIYPE QYAYMVDLKK TLDAGGNCVL EMPSGTGKTV TLLSLIVAYQ QYYPEHRKLI YCSRTMSEIE KALVELRALM KFRAERLGRE EEFRGLGLTS RKNLCLHPSV KREKSGTIVD ARCRSLTAGF VKEKREKGEN VETCIYHDNL DLLEQGNLIP NGIWTLDGLL RYGEEKKQCP YFTARRMMQY CNVIIYSYHY LLDPKIAERV SKDLSKDCIV VFDEAHNIDN VCIESLSTDI TQDSLMRATR GAQNLEAKIA EMKDSDQEKL QSEYEKLVEG LKGLDEGRQE DAFMANPTLP DDLLKEAVPG NIRRAEHFVA FLRRFIEYLK TRMKVRQVIS ETPPSFLAHL KEYTFIEKKP LRFCAERLTS LVRTLELTNI EDYRPLQEVA TFATLVATYE KGFLLILEPY ESDTAKTPNP VLHFTCLDAA IAIKPVFDRF SSVIITSGTI SPLEMYPKML NFETVVQESY AMTLARRSFL PMIVTRGSDQ ASISTSFQVR NEPSVVRNYG NLLTEFARMT PDGMVVFFPS YLYMESIISM WQGMGILDEV WKHKLILVET PDAQETSLAL ETYRTACCNG RGAVLLCVAR GKVSEGIDFD HQYGRTVLCI GVPFQYTESR ILKARLEFLR ETYRIRENDF LSFDAMRHAA QCLGRVLRGK DDYGVMVLAD RRFMKKRAQL PKWINQALLD ANTNLSTDMA VGNARAFLKQ MAQPFSSKDQ EGVSIWGMKD LRRHQEKMAE DLIVELKTAR EEEERERKRR EEEERRRLEE ERDRVSDYEM DEDDEAEMMA LDARIG // ID F8QGV9_SERL3 Unreviewed; 793 AA. AC F8QGV9; DT 21-SEP-2011, integrated into UniProtKB/TrEMBL. DT 21-SEP-2011, sequence version 1. DT 11-MAY-2016, entry version 23. DE SubName: Full=Putative uncharacterized protein {ECO:0000313|EMBL:EGN92441.1}; GN ORFNames=SERLA73DRAFT_99245 {ECO:0000313|EMBL:EGN92441.1}; OS Serpula lacrymans var. lacrymans (strain S7.3) (Dry rot fungus). OC Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; OC Agaricomycetes; Agaricomycetidae; Boletales; Coniophorineae; OC Serpulaceae; Serpula. OX NCBI_TaxID=936435 {ECO:0000313|Proteomes:UP000008063}; RN [1] {ECO:0000313|Proteomes:UP000008063} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=strain S7.3 {ECO:0000313|Proteomes:UP000008063}; RX PubMed=21764756; DOI=10.1126/science.1205411; RA Eastwood D.C., Floudas D., Binder M., Majcherczyk A., Schneider P., RA Aerts A., Asiegbu F.O., Baker S.E., Barry K., Bendiksby M., RA Blumentritt M., Coutinho P.M., Cullen D., de Vries R.P., Gathman A., RA Goodell B., Henrissat B., Ihrmark K., Kauserud H., Kohler A., RA LaButti K., Lapidus A., Lavin J.L., Lee Y.-H., Lindquist E., Lilly W., RA Lucas S., Morin E., Murat C., Oguiza J.A., Park J., Pisabarro A.G., RA Riley R., Rosling A., Salamov A., Schmidt O., Schmutz J., Skrede I., RA Stenlid J., Wiebenga A., Xie X., Kuees U., Hibbett D.S., RA Hoffmeister D., Hoegberg N., Martin F., Grigoriev I.V., RA Watkinson S.C.; RT "The plant cell wall-decomposing machinery underlies the functional RT diversity of forest fungi."; RL Science 333:762-765(2011). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GL945504; EGN92441.1; -; Genomic_DNA. DR EnsemblFungi; EGN92441; EGN92441; SERLA73DRAFT_99245. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000008063; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 7. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000008063}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000008063}. FT DOMAIN 7 291 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 793 AA; 90322 MW; C3CFF45D6563583D CRC64; MKFFIDNLPI IFPYDRIYPE QYAYMCDLKR TLDATGHCVL EMPSGTGKTV SLLSLIVSYQ QFYPTRRKLI YCSRTVPEIE KALAELKRLV EYRISCAETP EEKEKEQNFT GLGLTSRKNL CIHPEVSKEK KGKVVDARCR DLTNTAVCEK ARQDPGSVDI CDWHENLGQL EPGNLITPGI WTLADVLQHG RDNKLCPYFT IRRMMPFVDV VIYSFHYLLD PKVAEQVSKE LSKDAIVVFD EAHNIDNVCI ESLSIDLTRP MLDSAARSVT KLGEKIEEIK TTDAAKLQDE YAKLVEGLEE PASEAADEDN FMSNPVLPDD LLNEAIPGNI RKAEHFVAFL KRFVEYLKTR MRVLHVVAET PLSFLQHLKD ITYIERRPLR FCAERLQSMI RTLELNRLDE YSSLQKVASF ATLVATYEKG FLLILEPFET DNATVPNPIF HFTCLDPSLA IKPVFERFSS VVITSGTISP LDMYPKMLQF TPVVQETYPM TLTRNAFLPL VITRGSDQVA ISSRFEVRND PAVVRNFGSI LIEYSKIVPD GIVAFFPSYL YMESIVAAWN DMGILNEVWK NKLIFVETPD ANETSIALEN YRRACDNGRG AVLLSVARGK VSEGIDFDHN YGRAVIMFGV PYQYTESRIL KARLEYLRDA YRIRESEFLG FDAMRNAAQC VGRVLRGKTD WGLMVFADKR FARADKRAKL PRWINQYITE VASNLSTDMA LTLSKLFMRT ISQNPNENQT GISLWTLEDI EKAQAKQREL AIISEQDRGE AADDEYGDGG IEDEMLVDLD LDF // ID F9G9K6_FUSOF Unreviewed; 761 AA. AC F9G9K6; DT 19-OCT-2011, integrated into UniProtKB/TrEMBL. DT 19-OCT-2011, sequence version 1. DT 11-MAY-2016, entry version 31. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EGU74151.1}; GN ORFNames=FOXB_15338 {ECO:0000313|EMBL:EGU74151.1}; OS Fusarium oxysporum (strain Fo5176) (Fusarium vascular wilt). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; OC Sordariomycetes; Hypocreomycetidae; Hypocreales; Nectriaceae; OC Fusarium; Fusarium oxysporum species complex. OX NCBI_TaxID=660025 {ECO:0000313|EMBL:EGU74151.1, ECO:0000313|Proteomes:UP000002489}; RN [1] {ECO:0000313|EMBL:EGU74151.1, ECO:0000313|Proteomes:UP000002489} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Fo5176 {ECO:0000313|EMBL:EGU74151.1, RC ECO:0000313|Proteomes:UP000002489}; RX PubMed=21942452; DOI=10.1094/MPMI-08-11-0212; RA Thatcher L.F., Gardiner D.M., Kazan K., Manners J.; RT "A highly conserved effector in Fusarium oxysporum is required for RT full virulence on Arabidopsis."; RL Mol. Plant Microbe Interact. 25:180-190(2012). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:EGU74151.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AFQF01003777; EGU74151.1; -; Genomic_DNA. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000002489; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000002489}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000002489}. FT DOMAIN 1 254 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 227 269 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 761 AA; 87636 MW; D630887278968B29 CRC64; MQTLDAGGHC VLEMPSGTGK TVSLLSLIVA YQQYMPEKRK LIYCSRTMSE IEKALVELKS LMKYRAEQLG YEEEFRGLGL TSRKNLCLHP SVKREKSGAI VDARCRSLTA GFVKEKKERG ENVDVCVYHD NLDLLEPHNL IPNGVWSFDD MIRYGEEHKQ CPYFTARRMM QYCNVVIFSY HYLLDPKIAE RVSKDFSKDC IVVFDEAHNI DNVCIESLST DITEDSLRKA TRGAQNLENK ISQMRDTDQQ QLQNEYEKLV QGLRDADEAR QEDAFMANPA LPEDLLKEAV PGNIRRAEHF IAFLKRFIEY LKTRMKVRQV ISETPPSFLA HLREHTFIEK KPLRFCAERL TSLVRTLELT NIEDYQPLQE VATFATLVAT YEKGFLLILE PFESDTAEVP NPVLHFTCLD AAIAIKPVFD RFYSVIITSG TISPLEIYPK MLDFSTVIQE SYAMTLARRS FMPMIVTRGS DQASVSTSFQ VRNEPSVVRN YGNLLTEFAK ITPDGMVVFF PSYLYMESII SMWQGMGILD EVWKYKLILV ETPDAQETSL ALETYRTACC NGRGAVLLCV ARGKVSEGID FDHQYGRTVL CIGVPFQYTE SRILKARLQF LRETYRIKEN DFLSFDAMRH AAQCLGRVLR GKDDYGIMVL ADRRFQKKRS QLPKWINQGL QESDVNLSTD MAVSSARRFL RTMAQPFRAK DQEGISTWGY KDLMEHKEKM DLERIKELEE EAQRPKPAAQ DNNFEYHDDE FDQDMMEMDG F // ID F9XEJ8_ZYMTI Unreviewed; 801 AA. AC F9XEJ8; DT 19-OCT-2011, integrated into UniProtKB/TrEMBL. DT 19-OCT-2011, sequence version 1. DT 11-MAY-2016, entry version 31. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EGP86663.1}; GN ORFNames=MYCGRDRAFT_43883 {ECO:0000313|EMBL:EGP86663.1}; OS Zymoseptoria tritici (strain CBS 115943 / IPO323) (Speckled leaf OS blotch fungus) (Septoria tritici). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; OC Dothideomycetes; Dothideomycetidae; Capnodiales; Mycosphaerellaceae; OC Zymoseptoria. OX NCBI_TaxID=336722 {ECO:0000313|EMBL:EGP86663.1, ECO:0000313|Proteomes:UP000008062}; RN [1] {ECO:0000313|EMBL:EGP86663.1, ECO:0000313|Proteomes:UP000008062} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=CBS 115943 / IPO323 {ECO:0000313|Proteomes:UP000008062}; RX PubMed=21695235; DOI=10.1371/journal.pgen.1002070; RA Goodwin S.B., Ben M'barek S., Dhillon B., Wittenberg A.H.J., RA Crane C.F., Hane J.K., Foster A.J., Van der Lee T.A.J., Grimwood J., RA Aerts A., Antoniw J., Bailey A., Bluhm B., Bowler J., Bristow J., RA van der Burgt A., Canto-Canche B., Churchill A.C.L., Conde-Ferraez L., RA Cools H.J., Coutinho P.M., Csukai M., Dehal P., De Wit P., RA Donzelli B., van de Geest H.C., van Ham R.C.H.J., Hammond-Kosack K.E., RA Henrissat B., Kilian A., Kobayashi A.K., Koopmann E., Kourmpetis Y., RA Kuzniar A., Lindquist E., Lombard V., Maliepaard C., Martins N., RA Mehrabi R., Nap J.P.H., Ponomarenko A., Rudd J.J., Salamov A., RA Schmutz J., Schouten H.J., Shapiro H., Stergiopoulos I., RA Torriani S.F.F., Tu H., de Vries R.P., Waalwijk C., Ware S.B., RA Wiebenga A., Zwiers L.-H., Oliver R.P., Grigoriev I.V., Kema G.H.J.; RT "Finished genome of the fungal wheat pathogen Mycosphaerella RT graminicola reveals dispensome structure, chromosome plasticity, and RT stealth pathogenesis."; RL PLoS Genet. 7:E1002070-E1002070(2011). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CM001201; EGP86663.1; -; Genomic_DNA. DR RefSeq; XP_003851687.1; XM_003851639.1. DR EnsemblFungi; Mycgr3T43883; Mycgr3P43883; Mycgr3G43883. DR GeneID; 13401873; -. DR KEGG; ztr:MYCGRDRAFT_43883; -. DR InParanoid; F9XEJ8; -. DR KO; K10844; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000008062; Chromosome 6. DR GO; GO:0000439; C:core TFIIH complex; IEA:EnsemblFungi. DR GO; GO:0005675; C:holo TFIIH complex; IEA:EnsemblFungi. DR GO; GO:0000112; C:nucleotide-excision repair factor 3 complex; IEA:EnsemblFungi. DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:EnsemblFungi. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0043141; F:ATP-dependent 5'-3' DNA helicase activity; IEA:EnsemblFungi. DR GO; GO:0003684; F:damaged DNA binding; IEA:EnsemblFungi. DR GO; GO:0033683; P:nucleotide-excision repair, DNA incision; IEA:EnsemblFungi. DR GO; GO:0070816; P:phosphorylation of RNA polymerase II C-terminal domain; IEA:EnsemblFungi. DR GO; GO:0045951; P:positive regulation of mitotic recombination; IEA:EnsemblFungi. DR GO; GO:0010525; P:regulation of transposition, RNA-mediated; IEA:EnsemblFungi. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:EnsemblFungi. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000008062}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000008062}. FT DOMAIN 7 284 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 801 AA; 90841 MW; 123233872F35EB9A CRC64; MKFFIEDLPV LFPYPRIYPE QYAYMCDLKR TLDSGGHCVL EMPSGTGKTV SLLSLIVAYQ QFYPEHRKLI YCSRTMSEIE KALAELKALM KYRADQLGEV EDFRGLGLTS RKNLCLHPSV KREKSGSVVD SRCRSLTAGF VKEKKERGED VDLCIYHDNL DLLEPHNLIP PGVWTLDGML RYGEQQKQCP YFTARRMMPF CNVIIYSYHY LLDPKIAERV SKELSKDCIV VFDEAHNIDN VCIESLSIDL TEDSLRKAAR GASNLERKIT EMKDTDAEKL QNEYAKLVEG LREADEARDE GAFMSNPALP DDLLKEAIPG NIRRAEHFTA FLKRFIEYLK TRMKVLHVIS ETPPSFLQHL KELTFIEKKP LRFCAERLTS LVRTLELSNI EDYQPLQEVA TFATLVATYD TGFLLILEPY ESDTATVPNP ILHFTCLDAA IAIKPVFDRF SSVIITSGTI SPLEMYPKML GFTAVVQESY AMTLARRSFL PMIVTRGSDQ GQMSSGFQTR SDPGNIRNYG ALIIEFSKLT PDGIVVFFPS YLYMESVISM WQGMGILDQV WKSKLILVET PDSQETSLAL ETYRTACSNG RGAVLLCVAR GKVSEGIDFD HHYGRTVLCI GVPFQYTESR ILKARLEFLR ETYRIRENDF LSFDAMRHCA QCLGRVLRGK DDYGVMVMAD KRFAKKRTQL PKWIGSAMME SDANMSVDQA VAAAKKFLKN MSKPFPAKLQ DGISTWSYED LMEHQSKQHA QEKLQELNGG ADIDGYAGDQ VMADAQRNGD DDEFDMGEDP DMSAAMMELD A // ID G0MYP1_CAEBE Unreviewed; 714 AA. AC G0MYP1; DT 19-OCT-2011, integrated into UniProtKB/TrEMBL. DT 19-OCT-2011, sequence version 1. DT 11-MAY-2016, entry version 30. DE SubName: Full=Putative uncharacterized protein {ECO:0000313|EMBL:EGT47910.1}; GN ORFNames=CAEBREN_01520 {ECO:0000313|EMBL:EGT47910.1}; OS Caenorhabditis brenneri (Nematode worm). OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; OC Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. OX NCBI_TaxID=135651 {ECO:0000313|Proteomes:UP000008068}; RN [1] {ECO:0000313|Proteomes:UP000008068} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=PB2801 {ECO:0000313|Proteomes:UP000008068}; RG Caenorhabditis brenneri Sequencing and Analysis Consortium; RA Wilson R.K.; RL Submitted (JUL-2011) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GL379821; EGT47910.1; -; Genomic_DNA. DR STRING; 135651.CBN01520; -. DR EnsemblMetazoa; CBN01520; CBN01520; WBGene00140245. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; G0MYP1; -. DR OMA; KAMGRRQ; -. DR Proteomes; UP000008068; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000008068}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000008068}; KW Signal {ECO:0000256|SAM:SignalP}. FT SIGNAL 1 17 {ECO:0000256|SAM:SignalP}. FT CHAIN 18 714 {ECO:0000256|SAM:SignalP}. FT /FTId=PRO_5003404915. FT DOMAIN 1 240 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 235 262 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 714 AA; 81549 MW; AE84DDA29EEA11D1 CRC64; MPSGTGKTVS LLSLVLAYMI SYPDRLDKLV YCSRTIPEIE KCVEEMRVLY DYWEKETGMP VAKITVAMSA RKNLCINEKV AALRFGNTVD SACQKLTSSS VRAKKQEDPS IEGCDFFENF EANGFPMQNG VWNLENLRTL GREKKICPYF TARNAINRAH IVVYSYHYIL DPKIAELVSK DFSRKSVVVF DEAHNIDNVC IESMSVAISQ KNADRALQEL QNLEGVVGRM KTANSEKLKT EYDRLVEGLR KAERERANDE RLANPCIPDD ILKEAVPGNI RQANHFLLFL KRFVEYVRHR LRTHQVLIES PASFMKDIQE RMCIERRPMR FCAERLSNLV KTLEITDNGD VWALSQVTTL CTLVSTYSRG FSVIIEPQDG SQMAMLTLSC HDASIAIRPV LKRHQSVIIT SGTLSPLEMY PKILDFDPAV VASFTMTLAR PCLAPLVVAR GNDQVAMTSR FEQRADVAVI RNYGNLVLEM ASLVPDGMVV FFTSYLYMEN VIGVWYEQHI IDELMKYKLL FIETNDALET SAALEKYVEA CDSGRGAVLF SVARGKVSEG IDFSHHLGRC VIMLGIPYMY TESRVLRARL EYLRDTFNIR ENDFLTFDAM RHTAQCMGRA LRSKTDYGLM VFADKRFSRT DKRGKLPRWM QEYLEPASTN LSIDEAAQVA RRWLTLMAQP FQKEHQLGVS LLNKEMVQDQ QTMKRFDRVV EYVD // ID G0QQJ1_ICHMG Unreviewed; 809 AA. AC G0QQJ1; DT 19-OCT-2011, integrated into UniProtKB/TrEMBL. DT 19-OCT-2011, sequence version 1. DT 11-MAY-2016, entry version 23. DE SubName: Full=Tfiih basal transcription factor complex helicase subunit, putative {ECO:0000313|EMBL:EGR32513.1}; DE EC=2.1.1.72 {ECO:0000313|EMBL:EGR32513.1}; DE EC=3.1.11.5 {ECO:0000313|EMBL:EGR32513.1}; DE EC=3.6.3.14 {ECO:0000313|EMBL:EGR32513.1}; GN ORFNames=IMG5_079930 {ECO:0000313|EMBL:EGR32513.1}; OS Ichthyophthirius multifiliis (strain G5) (White spot disease agent) OS (Ich). OC Eukaryota; Alveolata; Ciliophora; Intramacronucleata; OC Oligohymenophorea; Hymenostomatida; Ophryoglenina; Ichthyophthirius. OX NCBI_TaxID=857967 {ECO:0000313|Proteomes:UP000008983}; RN [1] {ECO:0000313|EMBL:EGR32513.1, ECO:0000313|Proteomes:UP000008983} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=G5 {ECO:0000313|EMBL:EGR32513.1, RC ECO:0000313|Proteomes:UP000008983}; RA Coyne R., Brami D., Johnson J., Hostetler J., Hannick L., Clark T., RA Cassidy-Hanley D., Inman J.; RL Submitted (JUL-2011) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GL983644; EGR32513.1; -; Genomic_DNA. DR RefSeq; XP_004036499.1; XM_004036451.1. DR EnsemblProtists; EGR32513; EGR32513; IMG5_079930. DR GeneID; 14908676; -. DR InParanoid; G0QQJ1; -. DR Proteomes; UP000008983; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0008854; F:exodeoxyribonuclease V activity; IEA:UniProtKB-EC. DR GO; GO:0009007; F:site-specific DNA-methyltransferase (adenine-specific) activity; IEA:UniProtKB-EC. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EGR32513.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000008983}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EGR32513.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EGR32513.1}; KW Methyltransferase {ECO:0000313|EMBL:EGR32513.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EGR32513.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000008983}; KW Transferase {ECO:0000313|EMBL:EGR32513.1}. FT DOMAIN 7 291 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 258 285 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 809 AA; 94497 MW; BBFFB31AB2BEB3ED CRC64; MKFYINDLPV YFPYQSLYKE QLEYMKDLKL ILDNQGHGII EMPTGTGKTV CLLSLISSYL LQNQGKFKKL LYCTRTVVEM EKTIEELKFV LENTKKYILE EKREFKFLCT ALSARSNLCI NPLVQNQQKK EKIDDECLKL TAKWVRFRGE KGEQKLCTFF ENFEEKKEEI EFKEGIYNID DLKEIGKQKN ICPYFLARKL VNDSNIVVYN YMYLLSPQMK DIINKSLQKD CIVVFDEAHN IDNICLDVFT VNINKRLLDS AYKNVEQLEL KIDNMKNQSQ QSLENEYKQL LNGLKKKILL QKNNFYLLIK GVFEELAKQS IPLQIRLAKP FVLFLKKILM FLKNKLKEKN CINQDPPQFL SDMQIQNHID QTSLKFAEER LSQLFMSLEI TDNDEYVAIT TIAQFSTLLA MNQRGFKIIF QPSPLDGSLS DPLLTFTCLD SSLAIQNVFK EYASVILTSG TMSPLDIYPK ILNFNPFMLK SIDIELSRNS INPIIVTKGL DFTALSSEFE ARQNMTVTRS FGALLIDISK ICPDGIVAFF PSYRYMEQII FEWDQDGILD ELRKYKLVYF ESKDVAQTSQ SLFHFRRACD YGRGAIFFSI ARGKVAEGID FNEQYGRCVI MLGFPVQNSN DPILLERVKY LTENFKVTKN EYIEFDAMRQ CAQCLGRVMR GKNDYGLMIM AEKRFARSLV KKKLPEWIKK QIKDYNVDIS SEVVSAIAVN FFKEMGQEFI MNDKSFFNQQ QLLEMQDILQ IKQSSIDENL QLQIQYNQQL NIDEKNQVFQ EKIIVDSNNQ NEEQIYKNIS KKFAKKRKK // ID G0RX04_HYPJQ Unreviewed; 783 AA. AC G0RX04; DT 19-OCT-2011, integrated into UniProtKB/TrEMBL. DT 19-OCT-2011, sequence version 1. DT 11-MAY-2016, entry version 29. DE SubName: Full=DNA excision repair helicase {ECO:0000313|EMBL:EGR44274.1}; GN Name=rhp3 {ECO:0000313|EMBL:EGR44274.1}; GN ORFNames=TRIREDRAFT_112413 {ECO:0000313|EMBL:EGR44274.1}; OS Hypocrea jecorina (strain QM6a) (Trichoderma reesei). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; OC Sordariomycetes; Hypocreomycetidae; Hypocreales; Hypocreaceae; OC Trichoderma. OX NCBI_TaxID=431241 {ECO:0000313|Proteomes:UP000008984}; RN [1] {ECO:0000313|EMBL:EGR44274.1, ECO:0000313|Proteomes:UP000008984} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=QM6a {ECO:0000313|EMBL:EGR44274.1, RC ECO:0000313|Proteomes:UP000008984}; RX PubMed=18454138; DOI=10.1038/nbt1403; RA Martinez D., Berka R.M., Henrissat B., Saloheimo M., Arvas M., RA Baker S.E., Chapman J., Chertkov O., Coutinho P.M., Cullen D., RA Danchin E.G., Grigoriev I.V., Harris P., Jackson M., Kubicek C.P., RA Han C.S., Ho I., Larrondo L.F., de Leon A.L., Magnuson J.K., RA Merino S., Misra M., Nelson B., Putnam N., Robbertse B., Salamov A.A., RA Schmoll M., Terry A., Thayer N., Westerholm-Parvinen A., Schoch C.L., RA Yao J., Barabote R., Nelson M.A., Detter C., Bruce D., Kuske C.R., RA Xie G., Richardson P., Rokhsar D.S., Lucas S.M., Rubin E.M., RA Dunn-Coleman N., Ward M., Brettin T.S.; RT "Genome sequencing and analysis of the biomass-degrading fungus RT Trichoderma reesei (syn. Hypocrea jecorina)."; RL Nat. Biotechnol. 26:553-560(2008). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GL985094; EGR44274.1; -; Genomic_DNA. DR RefSeq; XP_006969773.1; XM_006969711.1. DR EnsemblFungi; EGR44274; EGR44274; TRIREDRAFT_112413. DR GeneID; 18482558; -. DR KEGG; tre:TRIREDRAFT_112413; -. DR KO; K10844; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000008984; Unassembled WGS sequence. DR GO; GO:0005829; C:cytosol; IEA:EnsemblFungi. DR GO; GO:0000112; C:nucleotide-excision repair factor 3 complex; IEA:EnsemblFungi. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0000717; P:nucleotide-excision repair, DNA duplex unwinding; IEA:EnsemblFungi. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EGR44274.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000008984}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EGR44274.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EGR44274.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EGR44274.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000008984}. FT DOMAIN 7 274 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 245 287 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 783 AA; 89590 MW; 5969122A2ACBAEEB CRC64; MKFNIDNLPV LFPYPRIYPE TLDAGGHCVL EMPSGTGKTV SLLSLIVAYQ QHMPEKRKLI YCSRTMSEIE KALVELQSLM KYRTEQLGYE EEFRGLGLTS RKNLCLHPSV KREKSGSIVD ARCRSLTAGF VKEKKDRGEN VDVCVYHDNL DLLEPHNLIP NGVWSFDALL RYGEEHKQCP YFTARRMMEY CNVVIFSYHY LLDPKIAERV SKDFSKDCIV VFDEAHNIDN VCIEALSTDI TEDSIRKATR SAQHLERRIA EMRETDQEQL QNEYEKLVQG LRAADESRQE DAFMANPALP DDLLKEAVPG NIRRAEHFVA FLKRFLEYLK TRMKVRQVIS ETPPSFLAHL KEHTFIEKKP LRFCAERLTS LVRTLELTNI EDYQALQEVA TFATLVATYE KGFLLILEPY ESDTAEVPNP TLHFTCLDAA IAIRPVFERF YSVIITSGTI SPLEMYPKML DFATVIQESY SMTLARKSFL PMIVTRGSDQ ASISSSFQVR NEPSVVRNYG SLLTEFAKIT PDGMVVFFPS YLYMESIISM WQGMGILDEV WKYKLILVET PDAQETSLAL ETYRTACCNG RGAILLCVAR GKVSEGIDFD HQYGRTVLCI GVPFQYTESR ILKARLEFLR ETYRIKENDF LSFDAMRHAA QCLGRVLRGK DDYGVMVLAD RRFQKKRNQL PKWINQGLSD ADTNLSTDMA VSAARRFLKT MAQPFRSKDQ EGISTWGYED LLRHQKKMEE ERGEEPPPVL ANARGQAHGS IAAGYESDYG DIDADMMELE GFE // ID G0RZH0_CHATD Unreviewed; 780 AA. AC G0RZH0; DT 19-OCT-2011, integrated into UniProtKB/TrEMBL. DT 19-OCT-2011, sequence version 1. DT 11-MAY-2016, entry version 26. DE SubName: Full=Putative uncharacterized protein {ECO:0000313|EMBL:EGS23598.1}; GN ORFNames=CTHT_0002930 {ECO:0000313|EMBL:EGS23598.1}; OS Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; OC Sordariomycetes; Sordariomycetidae; Sordariales; Chaetomiaceae; OC Chaetomium. OX NCBI_TaxID=759272 {ECO:0000313|Proteomes:UP000008066}; RN [1] {ECO:0000313|EMBL:EGS23598.1, ECO:0000313|Proteomes:UP000008066} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=DSM 1495 / CBS 144.50 / IMI 039719 RC {ECO:0000313|Proteomes:UP000008066}; RX PubMed=21784248; DOI=10.1016/j.cell.2011.06.039; RA Amlacher S., Sarges P., Flemming D., van Noort V., Kunze R., RA Devos D.P., Arumugam M., Bork P., Hurt E.; RT "Insight into structure and assembly of the nuclear pore complex by RT utilizing the genome of a eukaryotic thermophile."; RL Cell 146:277-289(2011). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GL988032; EGS23598.1; -; Genomic_DNA. DR RefSeq; XP_006690840.1; XM_006690777.1. DR EnsemblFungi; EGS23598; EGS23598; CTHT_0002930. DR GeneID; 18254331; -. DR KEGG; cthr:CTHT_0002930; -. DR KO; K10844; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000008066; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000008066}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000008066}. FT DOMAIN 1 266 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 238 265 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 780 AA; 89665 MW; 521B8D6EE6A59721 CRC64; MEFMIDYMCD LKKTLDAGGN CVLEMPSGTG KTITLLSLIV AYQQHYAEHR KLIYCSRTMS EIEKALVELK ALMKFRAERL GYVEEFRGLG LTSRKNLCLH PSVKREKSGT IVDARCRSLT AGFVKEKKQR GEDVDVCIYH DNLDLLEPHN LIPNGIWTLD NLLKYGEEHK QCPYFTARRM LQYCNVVIYS YHYLLDPKIA ERVSRDLSSD SIVVFDEAHN IDNVCIEALS TDITEESLRR ATRGAQNLEN RINEMKETDQ QKLQDEYEKL VEGLRGNDDG TREDSFMTSP VLPQDLLKEA VPGNIRRAEH FVAFLRRFIE YLKTRMKVRQ VISETPPSFL AHLKEYTFIE KKPLRWCAER LTSLVRTLEL TNIEDYHALQ EVATFATLVA TYEKGFLLIL EPYESDTAEV PNPVLHFCCL DAAIAIKPVF DKFRNVIITS GTISPLEMYP KMLNFTTVVQ ESYSMTLARR SFLPLIVTRG SDQASISTGF QVRNEPSVVR NYGNLLTEFA KITPDGMVVF FPSYLYMESI ISMWQGMGIL DEVWKYKLIL VETPDAQETS LALETYRTAC CNGRGAVLLC VARGKVSEGI DFDHQYGRTV LCIGVPFQYT ESRILKARLE FLRETYRIRE NDFLSFDAMR HAAQCLGRVL RGKDDYGLMV LADRRFQKKR NQLPKWIAQA LLDADTNLST DMAVSSARRF LKTMAQPFKA KDQEGISTWS LEDLKRHQQK MDEERMKELE AQREKESAPA VERPADQGRE SDYEVDEEEE REMMALDVGN // ID G0V9F4_NAUCC Unreviewed; 774 AA. AC G0V9F4; DT 19-OCT-2011, integrated into UniProtKB/TrEMBL. DT 19-OCT-2011, sequence version 1. DT 11-MAY-2016, entry version 33. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CCC68570.1}; GN Name=NCAS0B04860 {ECO:0000313|EMBL:CCC68570.1}; GN OrderedLocusNames=NCAS_0B04860 {ECO:0000313|EMBL:CCC68570.1}; OS Naumovozyma castellii (strain ATCC 76901 / CBS 4309 / NBRC 1992 / NRRL OS Y-12630) (Yeast) (Saccharomyces castellii). OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; OC Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Naumovozyma. OX NCBI_TaxID=1064592 {ECO:0000313|EMBL:CCC68570.1, ECO:0000313|Proteomes:UP000001640}; RN [1] {ECO:0000313|EMBL:CCC68570.1, ECO:0000313|Proteomes:UP000001640} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 76901 / CBS 4309 / NBRC 1992 / NRRL Y-12630 RC {ECO:0000313|Proteomes:UP000001640}; RX PubMed=22123960; DOI=10.1073/pnas.1112808108; RA Gordon J.L., Armisen D., Proux-Wera E., OhEigeartaigh S.S., RA Byrne K.P., Wolfe K.H.; RT "Evolutionary erosion of yeast sex chromosomes by mating-type RT switching accidents."; RL Proc. Natl. Acad. Sci. U.S.A. 108:20024-20029(2011). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=Type strain:CBS 4309; RA Gordon J.L., Armisen D., Proux-Wera E., OhEigeartaigh S.S., RA Byrne K.P., Wolfe K.H.; RT "Genome sequence of Naumovozyma castellii."; RL Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; HE576753; CCC68570.1; -; Genomic_DNA. DR RefSeq; XP_003674942.1; XM_003674894.1. DR STRING; 1064592.XP_003674942.1; -. DR EnsemblFungi; CCC68570; CCC68570; NCAS_0B04860. DR GeneID; 11526313; -. DR KEGG; ncs:NCAS_0B04860; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; G0V9F4; -. DR KO; K10844; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000001640; Chromosome 2. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000001640}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000001640}. FT DOMAIN 7 285 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 774 AA; 88953 MW; E675CAE1BBE68B62 CRC64; MKFYIDDLPV LFPYPKIYPE QYHYMCDLKK TLDAGGNSIL EMPSGTGKTV SLLSLTIAYQ MHYPEHRKII YCSRTMSEIE KALVELENLM DYRARELGHR ENFRGLGLTS RKNLCLHPVV SKERKGTVVD EKCRRMTNGV AKRKLEQDPN ADAELCEYHE NLYKMEVGDY LPNGVFSFEK LIKYCEERTI CPYFVVRRMI SMCNIMIYSY HYLLDPKIAE RVSNEVSKDS IVIFDEAHNI DNVCIESLSL DLTNDVLRRA TKGANALEER IDDVRKVDAQ KLQDEYDKLV EGLHTADILP VQEEPFVETP VLSKDLLKEA IPGNIRRAEH FVSFLKRLIE YLKTRMKVLH VISETPKSFL QHLKQLTFID RKPLRFCSER LSLLVRTLEV TEVEDFTALK DIATFATLIS TYEDGFLLII EPYEIENAAV PNPIMRFTCL DASIAIKPVF ERFSSVIITS GTISPLDMYP RMLNFETVLQ KSYAMTLAKK SFLPMIVTKG SDQVAISSRF EIRNDPSIVR NYGSMLVEFA KITPDGMVVF FPSYLYMESI VSMWQTMGIL DEVWKHKLIL VETPDAQETS LALETYRKAC SNGRGAILLS VARGKVSEGI DFDHQYGRTV LMIGIPFQYT ESRILKARLE FLRENYQIRE NDFLSFDAMR HAAQCLGRVL RGKDDYGVMV LADRRFSRKR TQLPKWIAQG LSDADLNLST DMAISNTKQF LRTMAQPDDP KDQEGVSVWS YDDLMKYQTE RKEKQGAHNG VLVDGDQDGD IEMA // ID G0W651_NAUDC Unreviewed; 771 AA. AC G0W651; DT 19-OCT-2011, integrated into UniProtKB/TrEMBL. DT 19-OCT-2011, sequence version 1. DT 11-MAY-2016, entry version 31. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CCD23262.1}; GN Name=NDAI0B02270 {ECO:0000313|EMBL:CCD23262.1}; GN OrderedLocusNames=NDAI_0B02270 {ECO:0000313|EMBL:CCD23262.1}; OS Naumovozyma dairenensis (strain ATCC 10597 / BCRC 20456 / CBS 421 / OS NBRC 0211 / NRRL Y-12639) (Saccharomyces dairenensis). OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; OC Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Naumovozyma. OX NCBI_TaxID=1071378 {ECO:0000313|EMBL:CCD23262.1, ECO:0000313|Proteomes:UP000000689}; RN [1] {ECO:0000313|EMBL:CCD23262.1, ECO:0000313|Proteomes:UP000000689} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 10597 / BCRC 20456 / CBS 421 / NBRC 0211 / NRRL Y-12639 RC {ECO:0000313|Proteomes:UP000000689}; RX PubMed=22123960; DOI=10.1073/pnas.1112808108; RA Gordon J.L., Armisen D., Proux-Wera E., OhEigeartaigh S.S., RA Byrne K.P., Wolfe K.H.; RT "Evolutionary erosion of yeast sex chromosomes by mating-type RT switching accidents."; RL Proc. Natl. Acad. Sci. U.S.A. 108:20024-20029(2011). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; HE580268; CCD23262.1; -; Genomic_DNA. DR RefSeq; XP_003668505.1; XM_003668457.1. DR STRING; 1071378.XP_003668505.1; -. DR EnsemblFungi; CCD23262; CCD23262; NDAI_0B02270. DR GeneID; 11497984; -. DR KEGG; ndi:NDAI_0B02270; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR KO; K10844; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000000689; Chromosome 2. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000000689}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000000689}. FT DOMAIN 7 285 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 771 AA; 88788 MW; 57D4E710AEBA6B37 CRC64; MKFYIDDLPV LFPYPKIYPE QYHYMCDLKK TLDAGGNSIL EMPSGTGKTV SLLSLTISYQ MHYPEHRKII YCSRTMSEIE KALVELENLM AYRAKELGHV ETFRGLGLTS RKNLCLHPVV SKERKGSVVD EKCRRMTNGI AKRKLEQDPN ADAELCEYHE NLYKMEVDEY LPNGVFSFEK LIKYCEERTI CPYFVVRRMI SMCNIMIYSY HYLLDPKIAE RVSNEVSKDS IVIFDEAHNI DNVCIESLSL DLTNDVLRRA TKGAHALEEK IDDVRKIDSQ RLQDEYDKLV EGLHSSDIVP EQEEPFVETP VLSKDLLKEA IPGNIRRAEH FVSFLKRLIE YLKTRMKVLH VISETPKSFL QHLKQLTFID RKPLRFCSER LSLLVRTLEV NDVEDFNSLK DIATFATLIS TYEDGFLLII EPYEIENAAV PNPIMRFTCL DASIAIKPVF EKFSSVIITS GTISPLDMYP RMLNFETVLQ KSYSMTLAKK SFLPMIVTKG SDQVAISSRF EIRNDPSIVR NYGSMLVEFA KITPDGMVVF FPSYLYMESI VSMWQTMGIL DEVWKHKLIL VETPDAQETS LALETYRKAC SNGRGAILLS VARGKVSEGI DFDHQYGRTV LMIGIPFQYT ESRILKARLE FLRENYQIRE NDFLSFDAMR HAAQCLGRVL RGKDDYGVMV LADRRFSRKR TQLPKWIAQG LSDADLNLST DMAISNAKQF LRTMAQPTDP KDQEGVSVWS FEDLTKHQNE KKKKSQPIEV LGEEDEDIEM E // ID G1M1G2_AILME Unreviewed; 762 AA. AC G1M1G2; DT 19-OCT-2011, integrated into UniProtKB/TrEMBL. DT 19-OCT-2011, sequence version 1. DT 11-MAY-2016, entry version 36. DE SubName: Full=Uncharacterized protein {ECO:0000313|Ensembl:ENSAMEP00000013173}; DE Flags: Fragment; GN Name=ERCC2 {ECO:0000313|Ensembl:ENSAMEP00000013173}; OS Ailuropoda melanoleuca (Giant panda). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; OC Ailuropoda. OX NCBI_TaxID=9646 {ECO:0000313|Ensembl:ENSAMEP00000013173, ECO:0000313|Proteomes:UP000008912}; RN [1] {ECO:0000313|Ensembl:ENSAMEP00000013173} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RX PubMed=20010809; DOI=10.1038/nature08696; RA Li R., Fan W., Tian G., Zhu H., He L., Cai J., Huang Q., Cai Q., RA Li B., Bai Y., Zhang Z., Zhang Y., Wang W., Li J., Wei F., Li H., RA Jian M., Li J., Zhang Z., Nielsen R., Li D., Gu W., Yang Z., Xuan Z., RA Ryder O.A., Leung F.C., Zhou Y., Cao J., Sun X., Fu Y., Fang X., RA Guo X., Wang B., Hou R., Shen F., Mu B., Ni P., Lin R., Qian W., RA Wang G., Yu C., Nie W., Wang J., Wu Z., Liang H., Min J., Wu Q., RA Cheng S., Ruan J., Wang M., Shi Z., Wen M., Liu B., Ren X., Zheng H., RA Dong D., Cook K., Shan G., Zhang H., Kosiol C., Xie X., Lu Z., RA Zheng H., Li Y., Steiner C.C., Lam T.T., Lin S., Zhang Q., Li G., RA Tian J., Gong T., Liu H., Zhang D., Fang L., Ye C., Zhang J., Hu W., RA Xu A., Ren Y., Zhang G., Bruford M.W., Li Q., Ma L., Guo Y., An N., RA Hu Y., Zheng Y., Shi Y., Li Z., Liu Q., Chen Y., Zhao J., Qu N., RA Zhao S., Tian F., Wang X., Wang H., Xu L., Liu X., Vinar T., Wang Y., RA Lam T.W., Yiu S.M., Liu S., Zhang H., Li D., Huang Y., Wang X., RA Yang G., Jiang Z., Wang J., Qin N., Li L., Li J., Bolund L., RA Kristiansen K., Wong G.K., Olson M., Zhang X., Li S., Yang H., RA Wang J., Wang J.; RT "The sequence and de novo assembly of the giant panda genome."; RL Nature 463:311-317(2010). RN [2] {ECO:0000313|Ensembl:ENSAMEP00000013173} RP IDENTIFICATION. RG Ensembl; RL Submitted (SEP-2011) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an Ensembl CC automatic analysis pipeline and should be considered as CC preliminary data. {ECO:0000313|Ensembl:ENSAMEP00000013173}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ACTA01098384; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; ACTA01106384; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; ACTA01114384; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; ACTA01122384; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; ACTA01130384; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR STRING; 9646.ENSAMEP00000013173; -. DR Ensembl; ENSAMET00000013728; ENSAMEP00000013173; ENSAMEG00000012464. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR GeneTree; ENSGT00550000075092; -. DR InParanoid; G1M1G2; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG70W3CM; -. DR TreeFam; TF101232; -. DR Proteomes; UP000008912; Unassembled WGS sequence. DR GO; GO:0019907; C:cyclin-dependent protein kinase activating kinase holoenzyme complex; IEA:Ensembl. DR GO; GO:0005737; C:cytoplasm; IEA:Ensembl. DR GO; GO:0005675; C:holo TFIIH complex; IEA:Ensembl. DR GO; GO:0071817; C:MMXD complex; IEA:Ensembl. DR GO; GO:0043139; F:5'-3' DNA helicase activity; IEA:Ensembl. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0008353; F:RNA polymerase II carboxy-terminal domain kinase activity; IEA:Ensembl. DR GO; GO:0007568; P:aging; IEA:Ensembl. DR GO; GO:0006915; P:apoptotic process; IEA:Ensembl. DR GO; GO:0030282; P:bone mineralization; IEA:Ensembl. DR GO; GO:0008283; P:cell proliferation; IEA:Ensembl. DR GO; GO:0032289; P:central nervous system myelin formation; IEA:Ensembl. DR GO; GO:0007059; P:chromosome segregation; IEA:Ensembl. DR GO; GO:0040016; P:embryonic cleavage; IEA:Ensembl. DR GO; GO:0043249; P:erythrocyte maturation; IEA:Ensembl. DR GO; GO:0030198; P:extracellular matrix organization; IEA:Ensembl. DR GO; GO:0035315; P:hair cell differentiation; IEA:Ensembl. DR GO; GO:0048820; P:hair follicle maturation; IEA:Ensembl. DR GO; GO:0060218; P:hematopoietic stem cell differentiation; IEA:Ensembl. DR GO; GO:0001701; P:in utero embryonic development; IEA:Ensembl. DR GO; GO:0035264; P:multicellular organism growth; IEA:Ensembl. DR GO; GO:0033683; P:nucleotide-excision repair, DNA incision; IEA:Ensembl. DR GO; GO:0043388; P:positive regulation of DNA binding; IEA:Ensembl. DR GO; GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IEA:Ensembl. DR GO; GO:0009791; P:post-embryonic development; IEA:Ensembl. DR GO; GO:1901990; P:regulation of mitotic cell cycle phase transition; IEA:Ensembl. DR GO; GO:0006979; P:response to oxidative stress; IEA:Ensembl. DR GO; GO:0021510; P:spinal cord development; IEA:Ensembl. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:Ensembl. DR GO; GO:0006283; P:transcription-coupled nucleotide-excision repair; IEA:Ensembl. DR GO; GO:0009650; P:UV protection; IEA:Ensembl. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000008912}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000008912}. FT DOMAIN 7 283 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 77 100 {ECO:0000256|SAM:Coils}. FT NON_TER 1 1 {ECO:0000313|Ensembl:ENSAMEP00000013173}. SQ SEQUENCE 762 AA; 87117 MW; 741F0E60B80F573F CRC64; ARLNVDGLLV YFPYDYIYPE QFSYMLELKR TLDAKGHGVL EMPSGTGKTV SLLALIMAYQ RAYPLEVTKL IYCSRTVPEI EKVIEELRKL LNFYEKQEGE KLPFLGLALS SRKNLCIHPE VMPLRFGKDV DGKCHSLTAS YVRAQYQQDS SLPHCRFYEE FDIHGRQVPL PAGIYNLDDL KALGRRQGWC PYFLARYSIL HANVVVYSYH YLLDPKIAEL VSKELARKAV VVFDEAHNID NVCIDSMSVN ITRRTLDRCQ GNLDTLQKTV LRIKETDEQR LREEYRRLVE GLREASARET DAHLANPVLP DEVLQEAVPG SIRTAEHFLG FLRRLLEYVK WRLRVQHVVQ ESPPAFLSGL AQRVCIQRKP LRFCAERLRS LLHTLEIADL ADFSPLTLLA NFATLVSTYA KGFTIIIEPF DDRTPTIANP ILHFSCMDAS LAIKPVFERF QSVIITSGTL SPLDIYPKIL DFHPVTMATF TMTLARVCLC PMIIGRGNDQ VAISSKFETR EDIAVIRNYG NLLLEMSAVV PDGIVAFFTS YQYMESTVAS WYEQGILENI QRNKLLFIET QDGAETSVAL EKYQEACENG RGAILLSVAR GKVSEGIDFA PPVHHYGRAV IMFGVPYVYT QSRILKARLE YLRDQFQIRE NDFLTFDAMR HAAQCVGRAI RGKTDYGLMV FADKRFARAD KRGKLPRWIQ EHLTDANLNL TVEEGVQVAK YFLRQMAQPF HREDQLGLSL LSLEQLESEE TLRRIEQIAQ QL // ID G1PK85_MYOLU Unreviewed; 757 AA. AC G1PK85; DT 19-OCT-2011, integrated into UniProtKB/TrEMBL. DT 19-OCT-2011, sequence version 1. DT 11-MAY-2016, entry version 35. DE SubName: Full=Uncharacterized protein {ECO:0000313|Ensembl:ENSMLUP00000011196}; DE Flags: Fragment; GN Name=ERCC2 {ECO:0000313|Ensembl:ENSMLUP00000011196}; OS Myotis lucifugus (Little brown bat). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Mammalia; Eutheria; Laurasiatheria; Chiroptera; Microchiroptera; OC Vespertilionidae; Myotis. OX NCBI_TaxID=59463 {ECO:0000313|Ensembl:ENSMLUP00000011196, ECO:0000313|Proteomes:UP000001074}; RN [1] {ECO:0000313|Ensembl:ENSMLUP00000011196} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RA Di Palma F., Heiman D., Young S., Johnson J., Lander E.S., RA Lindblad-Toh K.; RT "The genome sequence of Myotis lucifugus (Bat)."; RL Submitted (JUL-2010) to the EMBL/GenBank/DDBJ databases. RN [2] {ECO:0000313|Proteomes:UP000001074} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RX PubMed=21993624; DOI=10.1038/nature10530; RA Lindblad-Toh K., Garber M., Zuk O., Lin M.F., Parker B.J., RA Washietl S., Kheradpour P., Ernst J., Jordan G., Mauceli E., RA Ward L.D., Lowe C.B., Holloway A.K., Clamp M., Gnerre S., Alfoldi J., RA Beal K., Chang J., Clawson H., Cuff J., Di Palma F., Fitzgerald S., RA Flicek P., Guttman M., Hubisz M.J., Jaffe D.B., Jungreis I., RA Kent W.J., Kostka D., Lara M., Martins A.L., Massingham T., Moltke I., RA Raney B.J., Rasmussen M.D., Robinson J., Stark A., Vilella A.J., RA Wen J., Xie X., Zody M.C., Baldwin J., Bloom T., Chin C.W., Heiman D., RA Nicol R., Nusbaum C., Young S., Wilkinson J., Worley K.C., Kovar C.L., RA Muzny D.M., Gibbs R.A., Cree A., Dihn H.H., Fowler G., Jhangiani S., RA Joshi V., Lee S., Lewis L.R., Nazareth L.V., Okwuonu G., RA Santibanez J., Warren W.C., Mardis E.R., Weinstock G.M., Wilson R.K., RA Delehaunty K., Dooling D., Fronik C., Fulton L., Fulton B., Graves T., RA Minx P., Sodergren E., Birney E., Margulies E.H., Herrero J., RA Green E.D., Haussler D., Siepel A., Goldman N., Pollard K.S., RA Pedersen J.S., Lander E.S., Kellis M.; RT "A high-resolution map of human evolutionary constraint using 29 RT mammals."; RL Nature 478:476-482(2011). RN [3] {ECO:0000313|Ensembl:ENSMLUP00000011196} RP IDENTIFICATION. RG Ensembl; RL Submitted (SEP-2011) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an Ensembl CC automatic analysis pipeline and should be considered as CC preliminary data. {ECO:0000313|Ensembl:ENSMLUP00000011196}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AAPE02063454; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AAPE02063455; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AAPE02063456; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AAPE02063457; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR STRING; 59463.ENSMLUP00000011196; -. DR Ensembl; ENSMLUT00000012296; ENSMLUP00000011196; ENSMLUG00000012287. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR GeneTree; ENSGT00550000075092; -. DR InParanoid; G1PK85; -. DR OMA; KAMGRRQ; -. DR OrthoDB; EOG70W3CM; -. DR TreeFam; TF101232; -. DR Proteomes; UP000001074; Unassembled WGS sequence. DR GO; GO:0019907; C:cyclin-dependent protein kinase activating kinase holoenzyme complex; IEA:Ensembl. DR GO; GO:0005737; C:cytoplasm; IEA:Ensembl. DR GO; GO:0005675; C:holo TFIIH complex; IEA:Ensembl. DR GO; GO:0071817; C:MMXD complex; IEA:Ensembl. DR GO; GO:0043139; F:5'-3' DNA helicase activity; IEA:Ensembl. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0008353; F:RNA polymerase II carboxy-terminal domain kinase activity; IEA:Ensembl. DR GO; GO:0007568; P:aging; IEA:Ensembl. DR GO; GO:0006915; P:apoptotic process; IEA:Ensembl. DR GO; GO:0030282; P:bone mineralization; IEA:Ensembl. DR GO; GO:0008283; P:cell proliferation; IEA:Ensembl. DR GO; GO:0032289; P:central nervous system myelin formation; IEA:Ensembl. DR GO; GO:0007059; P:chromosome segregation; IEA:Ensembl. DR GO; GO:0040016; P:embryonic cleavage; IEA:Ensembl. DR GO; GO:0043249; P:erythrocyte maturation; IEA:Ensembl. DR GO; GO:0030198; P:extracellular matrix organization; IEA:Ensembl. DR GO; GO:0035315; P:hair cell differentiation; IEA:Ensembl. DR GO; GO:0048820; P:hair follicle maturation; IEA:Ensembl. DR GO; GO:0060218; P:hematopoietic stem cell differentiation; IEA:Ensembl. DR GO; GO:0001701; P:in utero embryonic development; IEA:Ensembl. DR GO; GO:0035264; P:multicellular organism growth; IEA:Ensembl. DR GO; GO:0033683; P:nucleotide-excision repair, DNA incision; IEA:Ensembl. DR GO; GO:0043388; P:positive regulation of DNA binding; IEA:Ensembl. DR GO; GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IEA:Ensembl. DR GO; GO:0009791; P:post-embryonic development; IEA:Ensembl. DR GO; GO:1901990; P:regulation of mitotic cell cycle phase transition; IEA:Ensembl. DR GO; GO:0006979; P:response to oxidative stress; IEA:Ensembl. DR GO; GO:0021510; P:spinal cord development; IEA:Ensembl. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:Ensembl. DR GO; GO:0006283; P:transcription-coupled nucleotide-excision repair; IEA:Ensembl. DR GO; GO:0009650; P:UV protection; IEA:Ensembl. DR Gene3D; 3.40.50.300; -; 1. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000001074}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000001074}. FT DOMAIN 7 296 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 77 100 {ECO:0000256|SAM:Coils}. FT NON_TER 1 1 {ECO:0000313|Ensembl:ENSMLUP00000011196}. SQ SEQUENCE 757 AA; 85615 MW; E7D0B4FE7625AC45 CRC64; ARLNVDGLLV YFPYDYIYPE QFSYMLELKR TLDAKGHGVL EMPSGTGKTV SLLALIMAYQ RAYPLEVTKL IYCSRTVPEI EKVIEELRKL LNFYEKQEGE KLPFLGLALS SRKNLCIHPE VTPLRFGKDV DGKCHSLTAS YVRAQYQRDP SLPHCRFYEE FDIHGRQVPL PAGIYNLDDL KAVGRRQGWC PYFLARYSVC ASVCLYQLAY FCAWPGFVCP RLCGPVRKRL AVPAGPCLSR APVLCLTRLQ GHQPCPDVPS GVTRSSYTPS PCRIKETDEQ RLREYRRLVE GLREASVARE TDAHLANPVL PDEVLQEAVP GSIRTAEHFL GFLRRLLEYV KWRLRVQHVV QESPPAFLSG LAQRVCIQRK PLRFCAERLR SLLHTLEIAD LADFSPLTLL ANFATLVSTY AKGFTIIIEP FDDRTPTIAN PILHFSCMDA SLAIKPVFER FQSVIITSGT LSPLDIYPKI LDFHPVTMAT FTMTLARVCL CPMVRGRGVG DFPPSAPSAD QAVLAMRRTR FCEGPVGVPP SVLSPCLCVC PGHRSLLQCL SHGILENIQR NKLLFIETQD GAETSVALEK YQEACENGRG AILLSVARGK VSEGIDFVHH FGRAVIMFGV PYVYTQSRIL KARLEYLRDQ FQIRENDFLT FDAMRHAAQC VGRAIRGKTD YGLMVFADKR FARADKRGKL PRWIQEHLTD ANLNLTVDEG VQVAKYFLRQ MAQPFHREDQ LGLSLLSLEQ LESEETLRRI EQIAQQL // ID G1QN76_NOMLE Unreviewed; 452 AA. AC G1QN76; DT 19-OCT-2011, integrated into UniProtKB/TrEMBL. DT 01-MAY-2013, sequence version 2. DT 11-MAY-2016, entry version 29. DE SubName: Full=Uncharacterized protein {ECO:0000313|Ensembl:ENSNLEP00000002392}; OS Nomascus leucogenys (Northern white-cheeked gibbon) (Hylobates OS leucogenys). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; OC Catarrhini; Hylobatidae; Nomascus. OX NCBI_TaxID=61853 {ECO:0000313|Ensembl:ENSNLEP00000002392, ECO:0000313|Proteomes:UP000001073}; RN [1] {ECO:0000313|Ensembl:ENSNLEP00000002392} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RG Gibbon Genome Sequencing Consortium; RL Submitted (JAN-2010) to the EMBL/GenBank/DDBJ databases. RN [2] {ECO:0000313|Ensembl:ENSNLEP00000002392} RP IDENTIFICATION. RG Ensembl; RL Submitted (SEP-2011) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00051130}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00556201}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00051146}. CC -!- CAUTION: The sequence shown here is derived from an Ensembl CC automatic analysis pipeline and should be considered as CC preliminary data. {ECO:0000313|Ensembl:ENSNLEP00000002392}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ADFV01101954; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; ADFV01101955; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; ADFV01101956; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR STRING; 61853.ENSNLEP00000002392; -. DR Ensembl; ENSNLET00000002521; ENSNLEP00000002392; ENSNLEG00000001994. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR GeneTree; ENSGT00550000075092; -. DR InParanoid; G1QN76; -. DR OMA; MEIFCAE; -. DR OrthoDB; EOG70W3CM; -. DR TreeFam; TF101232; -. DR Proteomes; UP000001073; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00491; HELICc2; 1. DR TIGRFAMs; TIGR00604; rad3; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00442371}; KW Complete proteome {ECO:0000313|Proteomes:UP000001073}; KW Helicase {ECO:0000256|SAAS:SAAS00442371}; KW Hydrolase {ECO:0000256|SAAS:SAAS00442371}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00442371}; KW Nucleus {ECO:0000256|SAAS:SAAS00442313}; KW Reference proteome {ECO:0000313|Proteomes:UP000001073}; KW Signal {ECO:0000256|SAM:SignalP}. FT SIGNAL 1 18 {ECO:0000256|SAM:SignalP}. FT CHAIN 19 452 {ECO:0000256|SAM:SignalP}. FT /FTId=PRO_5003420282. FT DOMAIN 195 339 HELICc2. {ECO:0000259|SMART:SM00491}. SQ SEQUENCE 452 AA; 50847 MW; B76E72AF2218C558 CRC64; MMAEAGLLVL FMFPSAPLTP SLLPTRFCAE RLRSLLHTLE ITDLADFSPL TLLANFATLV STYAKGFTII IEPFDDRTPT IANPILHFSC MDASLAIKPV FERFQSVIIT SGTLSPLDIY PKILDFHPVT MATFTMTLAR VCLCPMIIGR GNDQVAISSK FETREDIAVI RNYGNLLLEM SAVVPDGIVA FFTSYQYMES TVASWYEQGI LENIQRNKLL FIETQDGAET SVALEKYQEA CENGRGAILL SVARGKVSEG IDFVHHYGRA VIMFGVPYIY TQSRILKARL EYLRDQFQIR ENDFLTFDAM RHAAQCVGRA IRGKTDYGLM VFADKRFARG DKRGKLPRWI QEHLTDANLN LTVDEGVQVA KYFLRQMAQP FHRVRPASPS RHPPRLSSSS RKAPWILPTP QPQPACPPAL SKEKFIVHLR ARLWGVGGDS RGHRCQQVAQ AR // ID G1TQS0_RABIT Unreviewed; 728 AA. AC G1TQS0; DT 19-OCT-2011, integrated into UniProtKB/TrEMBL. DT 13-NOV-2013, sequence version 2. DT 11-MAY-2016, entry version 31. DE SubName: Full=Uncharacterized protein {ECO:0000313|Ensembl:ENSOCUP00000019366}; GN Name=ERCC2 {ECO:0000313|Ensembl:ENSOCUP00000019366}; OS Oryctolagus cuniculus (Rabbit). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; OC Oryctolagus. OX NCBI_TaxID=9986 {ECO:0000313|Ensembl:ENSOCUP00000019366, ECO:0000313|Proteomes:UP000001811}; RN [1] {ECO:0000313|Proteomes:UP000001811} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Thorbecke inbred {ECO:0000313|Proteomes:UP000001811}; RG The Genome Sequencing Platform; RG The Genome Assembly Team; RA Lindblad-Toh K., Chang J.L., Gnerre S., Clamp M., Lander E.S.; RL Submitted (MAY-2005) to the EMBL/GenBank/DDBJ databases. RN [2] {ECO:0000313|Proteomes:UP000001811} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Thorbecke inbred {ECO:0000313|Proteomes:UP000001811}; RG The Genome Sequencing Platform; RG The Assembly Computation and Development Core Team; RA Di Palma F., Heiman D., Young S., Gnerre S., Johnson J., Lander E.S., RA Lindblad-Toh K.; RT "Version 2 of The Genome Sequence of Oryctolagus cuniculus (European RT rabbit)."; RL Submitted (AUG-2009) to the EMBL/GenBank/DDBJ databases. RN [3] {ECO:0000313|Ensembl:ENSOCUP00000019366} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Thorbecke inbred {ECO:0000313|Ensembl:ENSOCUP00000019366}; RX PubMed=21993624; DOI=10.1038/nature10530; RA Lindblad-Toh K., Garber M., Zuk O., Lin M.F., Parker B.J., RA Washietl S., Kheradpour P., Ernst J., Jordan G., Mauceli E., RA Ward L.D., Lowe C.B., Holloway A.K., Clamp M., Gnerre S., Alfoldi J., RA Beal K., Chang J., Clawson H., Cuff J., Di Palma F., Fitzgerald S., RA Flicek P., Guttman M., Hubisz M.J., Jaffe D.B., Jungreis I., RA Kent W.J., Kostka D., Lara M., Martins A.L., Massingham T., Moltke I., RA Raney B.J., Rasmussen M.D., Robinson J., Stark A., Vilella A.J., RA Wen J., Xie X., Zody M.C., Baldwin J., Bloom T., Chin C.W., Heiman D., RA Nicol R., Nusbaum C., Young S., Wilkinson J., Worley K.C., Kovar C.L., RA Muzny D.M., Gibbs R.A., Cree A., Dihn H.H., Fowler G., Jhangiani S., RA Joshi V., Lee S., Lewis L.R., Nazareth L.V., Okwuonu G., RA Santibanez J., Warren W.C., Mardis E.R., Weinstock G.M., Wilson R.K., RA Delehaunty K., Dooling D., Fronik C., Fulton L., Fulton B., Graves T., RA Minx P., Sodergren E., Birney E., Margulies E.H., Herrero J., RA Green E.D., Haussler D., Siepel A., Goldman N., Pollard K.S., RA Pedersen J.S., Lander E.S., Kellis M.; RT "A high-resolution map of human evolutionary constraint using 29 RT mammals."; RL Nature 478:476-482(2011). RN [4] {ECO:0000313|Ensembl:ENSOCUP00000019366} RP IDENTIFICATION. RC STRAIN=Thorbecke {ECO:0000313|Ensembl:ENSOCUP00000019366}; RG Ensembl; RL Submitted (SEP-2011) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an Ensembl CC automatic analysis pipeline and should be considered as CC preliminary data. {ECO:0000313|Ensembl:ENSOCUP00000019366}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR STRING; 9986.ENSOCUP00000019366; -. DR Ensembl; ENSOCUT00000020969; ENSOCUP00000019366; ENSOCUG00000025269. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR GeneTree; ENSGT00550000075092; -. DR InParanoid; G1TQS0; -. DR OrthoDB; EOG70W3CM; -. DR TreeFam; TF101232; -. DR Proteomes; UP000001811; Unassembled WGS sequence. DR GO; GO:0019907; C:cyclin-dependent protein kinase activating kinase holoenzyme complex; IEA:Ensembl. DR GO; GO:0005737; C:cytoplasm; IEA:Ensembl. DR GO; GO:0005675; C:holo TFIIH complex; IEA:Ensembl. DR GO; GO:0071817; C:MMXD complex; IEA:Ensembl. DR GO; GO:0043139; F:5'-3' DNA helicase activity; IEA:Ensembl. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0008353; F:RNA polymerase II carboxy-terminal domain kinase activity; IEA:Ensembl. DR GO; GO:0007568; P:aging; IEA:Ensembl. DR GO; GO:0006915; P:apoptotic process; IEA:Ensembl. DR GO; GO:0030282; P:bone mineralization; IEA:Ensembl. DR GO; GO:0008283; P:cell proliferation; IEA:Ensembl. DR GO; GO:0032289; P:central nervous system myelin formation; IEA:Ensembl. DR GO; GO:0007059; P:chromosome segregation; IEA:Ensembl. DR GO; GO:0040016; P:embryonic cleavage; IEA:Ensembl. DR GO; GO:0043249; P:erythrocyte maturation; IEA:Ensembl. DR GO; GO:0030198; P:extracellular matrix organization; IEA:Ensembl. DR GO; GO:0035315; P:hair cell differentiation; IEA:Ensembl. DR GO; GO:0048820; P:hair follicle maturation; IEA:Ensembl. DR GO; GO:0060218; P:hematopoietic stem cell differentiation; IEA:Ensembl. DR GO; GO:0001701; P:in utero embryonic development; IEA:Ensembl. DR GO; GO:0035264; P:multicellular organism growth; IEA:Ensembl. DR GO; GO:0033683; P:nucleotide-excision repair, DNA incision; IEA:Ensembl. DR GO; GO:0043388; P:positive regulation of DNA binding; IEA:Ensembl. DR GO; GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IEA:Ensembl. DR GO; GO:0009791; P:post-embryonic development; IEA:Ensembl. DR GO; GO:1901990; P:regulation of mitotic cell cycle phase transition; IEA:Ensembl. DR GO; GO:0006979; P:response to oxidative stress; IEA:Ensembl. DR GO; GO:0021510; P:spinal cord development; IEA:Ensembl. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:Ensembl. DR GO; GO:0006283; P:transcription-coupled nucleotide-excision repair; IEA:Ensembl. DR GO; GO:0009650; P:UV protection; IEA:Ensembl. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 3. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000001811}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000001811}. FT DOMAIN 1 251 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 728 AA; 81912 MW; 308722E90846536F CRC64; MPSRRPTGPC QLLESGWGRA GPAHSGAPMC ATETQGVEPP PAASRGARAL PAVCGGAARV VQSPACPCGA WRPASWRGHS APPCPPPQVT PLRFGKDVDG KCHSLTASYI RAQYQQDASR PHCRFYEEFD AHGRQVPLPA GIYNLDDLKA LGQRQGWCPY FLARYSILHA NVVVYSYHYL LDPKIADLVS KELARKAVVV FDEAHNIDNV CIDSMSVNLT RRTLDRCQGN LETLQKTVQR IKETDEQRLR DEYRRLVEGL REASVARETD AHLANPVLPD EVLQEAVPGS IRTAEHFLGF LRRLLEFVKW RLRVQHVVQE SPPAFLSSLA QRVCIQRKPL RFCAERLRSL LHTLEIADLA DFSPLTLLAN FATLVSTYAK GFTIIIEPFD DRTPTIANPV LHFSCMDASL AIKPVFERFQ SVIITSGTLS PLDIYPKILD FHPVTMATFT MTLARVCLCP MIVGRGNDQV AISSKFESRE DMAVIRNYGN LLLEMSAVVP DGIVAFFTSY QYMESTVASW YEQGILENIQ RNKLLFIETQ DGAETSVALE KYQEACENGR GAILLSVARG KVSEGIDFVH HYGRAVIMFG VPYVYTQSRI LKARLEYLRD QFQIRENDFL TFDAMRHAAQ CVGRAIRGKT DYGLMVFADK RFARADKRGK LPRWIQEHLT DANLNLTVDE GVQVAKYFLR QMAQPFHRED QLGLSLLSLE QLESEETLRR IEQIAQQL // ID G1XLX1_ARTOA Unreviewed; 749 AA. AC G1XLX1; DT 16-NOV-2011, integrated into UniProtKB/TrEMBL. DT 16-NOV-2011, sequence version 1. DT 11-MAY-2016, entry version 28. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EGX45813.1}; GN ORFNames=AOL_s00117g18 {ECO:0000313|EMBL:EGX45813.1}; OS Arthrobotrys oligospora (strain ATCC 24927 / CBS 115.81 / DSM 1491) OS (Nematode-trapping fungus) (Didymozoophaga oligospora). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Orbiliomycetes; OC Orbiliales; Orbiliaceae; Orbilia. OX NCBI_TaxID=756982 {ECO:0000313|EMBL:EGX45813.1, ECO:0000313|Proteomes:UP000008784}; RN [1] {ECO:0000313|EMBL:EGX45813.1, ECO:0000313|Proteomes:UP000008784} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 24927 / CBS 115.81 / DSM 1491 RC {ECO:0000313|Proteomes:UP000008784}; RX PubMed=21909256; DOI=10.1371/journal.ppat.1002179; RA Yang J., Wang L., Ji X., Feng Y., Li X., Zou C., Xu J., Ren Y., Mi Q., RA Wu J., Liu S., Liu Y., Huang X., Wang H., Niu X., Li J., Liang L., RA Luo Y., Ji K., Zhou W., Yu Z., Li G., Liu Y., Li L., Qiao M., Feng L., RA Zhang K.-Q.; RT "Genomic and proteomic analyses of the fungus Arthrobotrys oligospora RT provide insights into nematode-trap formation."; RL PLoS Pathog. 7:E1002179-E1002179(2011). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:EGX45813.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ADOT01000204; EGX45813.1; -; Genomic_DNA. DR RefSeq; XP_011125483.1; XM_011127181.1. DR EnsemblFungi; EGX45813; EGX45813; AOL_s00117g18. DR GeneID; 22896460; -. DR InParanoid; G1XLX1; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000008784; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000008784}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000008784}. FT DOMAIN 1 243 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 697 720 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 749 AA; 85692 MW; BC7752B0EFBD5A11 CRC64; MPSGTGKTVS LLSLIVAYQQ HYPEHRKLIY CSRTMSEIEK ALYELKALME YRAKELGQVE DFRGLGLTSR KNLCLHPSVK REKKGTVVDA RCRSLTAGFV KEKKEKGEEV ESCIYHDNLD LLEPHNLIPP GVYTLDGMLK YGEDQKQCPY FTARRMMPYC NVIIYSYHYL LDPKIAERVS KELSKDCIVV FDEAHNIDNV CIESLSIDIT EDSLRKAARG CTSLEKKIED MKSTDADKLQ QEYAKLVEGL QDASTAREED SFMANPVLPD DLLKEAVPGN IRRAEHFVAF LKRFVEYLKT RMKVLHVISE TPPSFLQHLK DLTFIEKKPL RFCAERLTSL IRTLELSNVE EFQALQEVAT FATLVATYEK GFLLILEPFE SETATVPNPI FHFTCLDASI AIKPVFDRFW SVVITSGTIS PLEMYPKMLQ FDCVVQESYA MTLARRSFLP MVVTRGSDQV AISSRFEIRN DPSVVRNYGN LMIEFSKITP DGLVIFFPSY LYMESIISMW QGMGILDEVW KYKLILVETP DSQETSLALE TYRTACCNGR GAVLLCVARG KVSEGIDFDH QYGRTVICIG VPFQYTESRI LKARLEFLRE NFRIKENDFL SFDAMRHAAQ CLGRVLRGKD DYGIMVLADK RFGKKRNQLP KWIAQALLDS EMNLSVDMSV AAAKKFLRTM AQPFAQKDQE GISTWSLEDL NAHMRKVRIQ QEEMERMQVD QAEEAVNGNG RDEYEISDEE MDEAMMKLG // ID G2HHJ3_PANTR Unreviewed; 760 AA. AC G2HHJ3; DT 16-NOV-2011, integrated into UniProtKB/TrEMBL. DT 16-NOV-2011, sequence version 1. DT 11-MAY-2016, entry version 34. DE SubName: Full=TFIIH basal transcription factor complex helicase subunit {ECO:0000313|EMBL:BAK63201.1}; DE SubName: Full=Uncharacterized protein {ECO:0000313|Ensembl:ENSPTRP00000019135}; GN Name=ERCC2 {ECO:0000313|Ensembl:ENSPTRP00000019135}; OS Pan troglodytes (Chimpanzee). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; OC Catarrhini; Hominidae; Pan. OX NCBI_TaxID=9598; RN [1] {ECO:0000313|Ensembl:ENSPTRP00000019135, ECO:0000313|Proteomes:UP000002277} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RX PubMed=16136131; DOI=10.1038/nature04072; RG Chimpanzee sequencing and analysis consortium; RT "Initial sequence of the chimpanzee genome and comparison with the RT human genome."; RL Nature 437:69-87(2005). RN [2] {ECO:0000313|Proteomes:UP000002277} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RX PubMed=16136134; DOI=10.1038/nature04101; RA Hughes J.F., Skaletsky H., Pyntikova T., Minx P.J., Graves T., RA Rozen S., Wilson R.K., Page D.C.; RT "Conservation of Y-linked genes during human evolution revealed by RT comparative sequencing in chimpanzee."; RL Nature 437:100-103(2005). RN [3] {ECO:0000313|EMBL:BAK63201.1} RP NUCLEOTIDE SEQUENCE. RC TISSUE=Testis {ECO:0000313|EMBL:BAK63201.1}; RX PubMed=21484476; DOI=10.1007/s10142-011-0220-9; RA Kim R.N., Kim D.W., Choi S.H., Chae S.H., Nam S.H., Kim D.W., Kim A., RA Kang A., Park K.H., Lee Y.S., Hirai M., Suzuki Y., Sugano S., RA Hashimoto K., Kim D.S., Park H.S.; RT "Major chimpanzee-specific structural changes in sperm development- RT associated genes."; RL Funct. Integr. Genomics 11:507-517(2011). RN [4] {ECO:0000313|Ensembl:ENSPTRP00000019135} RP IDENTIFICATION. RG Ensembl; RL Submitted (FEB-2012) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AACZ03116821; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AK306207; BAK63201.1; -; mRNA. DR RefSeq; NP_001233519.1; NM_001246590.1. DR STRING; 9598.ENSPTRP00000019135; -. DR Ensembl; ENSPTRT00000020720; ENSPTRP00000019135; ENSPTRG00000011149. DR GeneID; 456124; -. DR KEGG; ptr:456124; -. DR CTD; 2068; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR GeneTree; ENSGT00550000075092; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG70W3CM; -. DR TreeFam; TF101232; -. DR NextBio; 20837312; -. DR Proteomes; UP000002277; Chromosome 19. DR GO; GO:0019907; C:cyclin-dependent protein kinase activating kinase holoenzyme complex; IEA:Ensembl. DR GO; GO:0005737; C:cytoplasm; IEA:Ensembl. DR GO; GO:0005675; C:holo TFIIH complex; IEA:Ensembl. DR GO; GO:0071817; C:MMXD complex; IEA:Ensembl. DR GO; GO:0043139; F:5'-3' DNA helicase activity; IEA:Ensembl. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0008353; F:RNA polymerase II carboxy-terminal domain kinase activity; IEA:Ensembl. DR GO; GO:0007568; P:aging; IEA:Ensembl. DR GO; GO:0006915; P:apoptotic process; IEA:Ensembl. DR GO; GO:0030282; P:bone mineralization; IEA:Ensembl. DR GO; GO:0008283; P:cell proliferation; IEA:Ensembl. DR GO; GO:0032289; P:central nervous system myelin formation; IEA:Ensembl. DR GO; GO:0007059; P:chromosome segregation; IEA:Ensembl. DR GO; GO:0040016; P:embryonic cleavage; IEA:Ensembl. DR GO; GO:0043249; P:erythrocyte maturation; IEA:Ensembl. DR GO; GO:0030198; P:extracellular matrix organization; IEA:Ensembl. DR GO; GO:0035315; P:hair cell differentiation; IEA:Ensembl. DR GO; GO:0048820; P:hair follicle maturation; IEA:Ensembl. DR GO; GO:0060218; P:hematopoietic stem cell differentiation; IEA:Ensembl. DR GO; GO:0001701; P:in utero embryonic development; IEA:Ensembl. DR GO; GO:0035264; P:multicellular organism growth; IEA:Ensembl. DR GO; GO:0033683; P:nucleotide-excision repair, DNA incision; IEA:Ensembl. DR GO; GO:0043388; P:positive regulation of DNA binding; IEA:Ensembl. DR GO; GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IEA:Ensembl. DR GO; GO:0009791; P:post-embryonic development; IEA:Ensembl. DR GO; GO:1901990; P:regulation of mitotic cell cycle phase transition; IEA:Ensembl. DR GO; GO:0006979; P:response to oxidative stress; IEA:Ensembl. DR GO; GO:0021510; P:spinal cord development; IEA:Ensembl. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:Ensembl. DR GO; GO:0006283; P:transcription-coupled nucleotide-excision repair; IEA:Ensembl. DR GO; GO:0009650; P:UV protection; IEA:Ensembl. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 2: Evidence at transcript level; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:BAK63201.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000002277}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:BAK63201.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:BAK63201.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:BAK63201.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000002277}. FT DOMAIN 7 283 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 77 100 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 760 AA; 86895 MW; F385A9B6B7057D48 CRC64; MKLNVDGLLV YFPYDYIYPE QFSYMRELKR TLDAKGHGVL EMPSGTGKTV SLLALIMAYQ RAYPLEVTKL IYCSRTVPEI EKVIEELRKL LNFYEKQEGE KLPFLGLALS SRKNLCIHPE VTPLRFGKDV DGKCHSLTAS YVRAQYQHDS SLPHCRFYEE FDAHGREVPL PAGIYNLDDL KALGRRQGWC PYFLARYSIL HANVVVYSYH YLLDPKIADL VSKELARKAV VVFDEAHNID NVCIDSMSVN LTRRTLDRCQ GNLETLQKTV LRIKETDEQR LRDEYRRLVE GLREASAARE TDAHLANPVL PDEVLQEAVP GSIRTAEHFL GFLRRLLEYV KWRLRVQHVV QESPPAFLSG LAQRVCIQRK PLRFCAERLR SLLHTLEITD LADFSPLTLL ANFATLVSTY AKGFTIIIEP FDDRTPTIAN PILHFSCMDA SLAIKPVFER FQSVIITSGT LSPLDIYPKI LDFHPVTMAT FTMTLARVCL CPMIIGRGND QVAISSKFET REDIAVIRNY GNLLLEMSAV VPDGIVAFFT SYQYMESTVA SWYEQGILEN IQRNKLLFIE TQDGAETSVA LEKYQEACEN GRGAILLSVA RGKVSEGIDF VHHYGRAVIM FGVPYVYTQS RILKARLEYL RDQFQIREND FLTFDAMRHA AQCVGRAIRG KTDYGLMVFA DKRFARGDKR GKLPRWIQEH LTDANLNLTV DEGVQVAKYF LRQMAQPFHR EDQLGLSLLS LEQLESEETL QRIEQIAQQL // ID G2QQG8_MYCTT Unreviewed; 799 AA. AC G2QQG8; DT 16-NOV-2011, integrated into UniProtKB/TrEMBL. DT 16-NOV-2011, sequence version 1. DT 11-MAY-2016, entry version 30. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AEO61831.1}; GN ORFNames=MYCTH_104059 {ECO:0000313|EMBL:AEO61831.1}; OS Myceliophthora thermophila (strain ATCC 42464 / BCRC 31852 / DSM 1799) OS (Sporotrichum thermophile). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; OC Sordariomycetes; Sordariomycetidae; Sordariales; Chaetomiaceae; OC Myceliophthora. OX NCBI_TaxID=573729 {ECO:0000313|EMBL:AEO61831.1, ECO:0000313|Proteomes:UP000007322}; RN [1] {ECO:0000313|EMBL:AEO61831.1, ECO:0000313|Proteomes:UP000007322} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 42464 / BCRC 31852 / DSM 1799 RC {ECO:0000313|Proteomes:UP000007322}; RX PubMed=21964414; DOI=10.1038/nbt.1976; RA Berka R.M., Grigoriev I.V., Otillar R., Salamov A., Grimwood J., RA Reid I., Ishmael N., John T., Darmond C., Moisan M.-C., Henrissat B., RA Coutinho P.M., Lombard V., Natvig D.O., Lindquist E., Schmutz J., RA Lucas S., Harris P., Powlowski J., Bellemare A., Taylor D., Butler G., RA de Vries R.P., Allijn I.E., van den Brink J., Ushinsky S., Storms R., RA Powell A.J., Paulsen I.T., Elbourne L.D.H., Baker S.E., Magnuson J., RA LaBoissiere S., Clutterbuck A.J., Martinez D., Wogulis M., RA de Leon A.L., Rey M.W., Tsang A.; RT "Comparative genomic analysis of the thermophilic biomass-degrading RT fungi Myceliophthora thermophila and Thielavia terrestris."; RL Nat. Biotechnol. 29:922-927(2011). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP003008; AEO61831.1; -; Genomic_DNA. DR RefSeq; XP_003667076.1; XM_003667028.1. DR STRING; 573729.XP_003667076.1; -. DR EnsemblFungi; AEO61831; AEO61831; MYCTH_104059. DR GeneID; 11509471; -. DR KEGG; mtm:MYCTH_104059; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; G2QQG8; -. DR KO; K10844; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000007322; Chromosome 7. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000007322}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000007322}. FT DOMAIN 7 281 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 253 280 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 799 AA; 91453 MW; 53169382520575B5 CRC64; MEFNIDDLPV LFPYPRIYPG NYMVDLKKTL DAGGNCVLEM PSGTGKTVTL LSLIVAYQQY YPSHRKLIYC SRTMSEIEKA LVELKALMKF RAERLGYEEE FRGLGLTSRK NLCLHPSVKR EKSGNVVDAR CRSLTAGFIK EKKEKGEDVE VCVYHDNLDL LEPHNLIPNG VWTFDGILRY GEQHKQCPYF TARRMMQYCN VIIYSYHYLL DPKIAERVSR ELSKDCIVVF DEAHNIDNVC IEALSTDITD DSLRKATRGA QNLENKINEM RESDQQKLQD EYEKLVEGLK GADDGRQEDS FMANPTLPDD LLKEAVPGNI RRAEHFVAFL RRFIEYLKTR MKVRQVISET PPSFLAHLKE HTFIEKKPLR FCAERLTSLV RTLELTNIED YQPLQEVATF ATLVATYEKG FLLILEPFES DTAEVPNPVL HFTCLDAAIA IKPVFDRFSS VVITSGTLSP LEMYPKMLNF PTVVQESYSM TLARRSFLPM IVTRGSDQAS ISTSFQVRNE PSVVRNYGNL LTEFAKITPD GMVVFFPSYL YMESIISMWQ GMGILDEVWK YKLILVETPD AQETSLALET YRTACCNGRG AVLLCVARGK VSEGIDFDHQ YGRTVLCIGV PFQYTESRIL KARLEFLRET YRIRENDFLS FDAMRHAAQC LGRVLRGKDD YGLMVLADRR FQRKRAQLPK WISQALLDAD VNLSTDMAVS SARRFLRTMA QPFRAKDQEG ISTWSIDDLR RHQEKMDEER IKELQAQRER ELNPALAAQA AVAEDGGVSD YDMDDDDEAE LMALDNKQG // ID G2RIE0_THITE Unreviewed; 800 AA. AC G2RIE0; DT 16-NOV-2011, integrated into UniProtKB/TrEMBL. DT 16-NOV-2011, sequence version 1. DT 11-MAY-2016, entry version 29. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AEO71602.1}; GN ORFNames=THITE_2124189 {ECO:0000313|EMBL:AEO71602.1}; OS Thielavia terrestris (strain ATCC 38088 / NRRL 8126) (Acremonium OS alabamense). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; OC Sordariomycetes; Sordariomycetidae; Sordariales; Chaetomiaceae; OC Thielavia. OX NCBI_TaxID=578455 {ECO:0000313|EMBL:AEO71602.1, ECO:0000313|Proteomes:UP000008181}; RN [1] {ECO:0000313|EMBL:AEO71602.1, ECO:0000313|Proteomes:UP000008181} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 38088 / NRRL 8126 {ECO:0000313|Proteomes:UP000008181}; RX PubMed=21964414; DOI=10.1038/nbt.1976; RA Berka R.M., Grigoriev I.V., Otillar R., Salamov A., Grimwood J., RA Reid I., Ishmael N., John T., Darmond C., Moisan M.-C., Henrissat B., RA Coutinho P.M., Lombard V., Natvig D.O., Lindquist E., Schmutz J., RA Lucas S., Harris P., Powlowski J., Bellemare A., Taylor D., Butler G., RA de Vries R.P., Allijn I.E., van den Brink J., Ushinsky S., Storms R., RA Powell A.J., Paulsen I.T., Elbourne L.D.H., Baker S.E., Magnuson J., RA LaBoissiere S., Clutterbuck A.J., Martinez D., Wogulis M., RA de Leon A.L., Rey M.W., Tsang A.; RT "Comparative genomic analysis of the thermophilic biomass-degrading RT fungi Myceliophthora thermophila and Thielavia terrestris."; RL Nat. Biotechnol. 29:922-927(2011). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP003014; AEO71602.1; -; Genomic_DNA. DR RefSeq; XP_003657938.1; XM_003657890.1. DR STRING; 578455.XP_003657938.1; -. DR EnsemblFungi; AEO71602; AEO71602; THITE_2124189. DR GeneID; 11523296; -. DR KEGG; ttt:THITE_2124189; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR KO; K10844; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000008181; Chromosome 6. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000008181}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000008181}. FT DOMAIN 7 283 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 255 282 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 800 AA; 91593 MW; D076AAE1056EA85F CRC64; MEFNIDDLPV LFPYPRIYPE QYAYMVDLKK TLDAGGNCVL EMPSGTGKTV TLLSLIVAYQ QYYPSHRKLI YCSRTMSEIE KALVELKALM KFRAQRLGHE EEFRGLGLTS RKNLCLHPSV KREKSGNVVD ARCRSLTAGF VKEKKNKGED VEVCVYHDNL DLLEPHNLIP NGIWTLDGLL RYGEQHKQCP YFTARRMMQY CNVIIYSYHY LLDPKIAERV SKDLSKDCIV VFDEAHNIDN VCIESLSTDI TEDSLRRATR GAQNLENRIN EMRESDQQKL QDEYEKLVEG LRGADDGRQE DSFMANPTLP DDLLKEAVPG NIRRAEHFVA FLRRFIEYLK TRMKVRQVIS ETPPSFLAHL KEYTFIEKKP LRFCAERLTS LVRTLELTNI EDYQPLQEVA TFATLVATYE KGFLLILEPY ESDTAEVPNP VLHFTCLDAA IAIKPVFDRF SSVIITSGTI SPLEMYPKML NFPTVVQESY SMTLARRSFL PMIVTRGSDQ ASISTSFQVR NEPSVVRNYG NLLTEFAKIT PDGMVVFFPS YLYMESIISM WQGMGILDEV WKYKLILVET PDAQETSLAL ETYRTACCNG RGAVLLCVAR GKVSEGIDFD HQYGRTVLCV GVPFQYTESR ILKARLEFLR ETYRIRENDF LSFDAMRHAA QCLGRVLRGK DDYGLMVLAD RRFQKKRAQL PKWINQALLD ADTNLSTDMA VSSARRFLKT MAQPFRAKDQ EGISTWSLAD LRRHQEKMDE ERIKDLQAQR DRELNPLVAA PAAVAVGNGQ EESDYEMDDL DDAELMALDG // ID G2XIP9_VERDV Unreviewed; 772 AA. AC G2XIP9; DT 16-NOV-2011, integrated into UniProtKB/TrEMBL. DT 16-NOV-2011, sequence version 1. DT 11-MAY-2016, entry version 27. DE SubName: Full=DNA repair helicase RAD3 {ECO:0000313|EMBL:EGY20402.1}; GN ORFNames=VDAG_10031 {ECO:0000313|EMBL:EGY20402.1}; OS Verticillium dahliae (strain VdLs.17 / ATCC MYA-4575 / FGSC 10137) OS (Verticillium wilt). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; OC Sordariomycetes; Hypocreomycetidae; Glomerellales; OC Plectosphaerellaceae; Verticillium. OX NCBI_TaxID=498257 {ECO:0000313|Proteomes:UP000001611}; RN [1] {ECO:0000313|Proteomes:UP000001611} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=VdLs.17 / ATCC MYA-4575 / FGSC 10137 RC {ECO:0000313|Proteomes:UP000001611}; RX PubMed=21829347; DOI=10.1371/journal.ppat.1002137; RA Klosterman S.J., Subbarao K.V., Kang S., Veronese P., Gold S.E., RA Thomma B.P.H.J., Chen Z., Henrissat B., Lee Y.-H., Park J., RA Garcia-Pedrajas M.D., Barbara D.J., Anchieta A., de Jonge R., RA Santhanam P., Maruthachalam K., Atallah Z., Amyotte S.G., Paz Z., RA Inderbitzin P., Hayes R.J., Heiman D.I., Young S., Zeng Q., Engels R., RA Galagan J., Cuomo C.A., Dobinson K.F., Ma L.-J.; RT "Comparative genomics yields insights into niche adaptation of plant RT vascular wilt pathogens."; RL PLoS Pathog. 7:E1002137-E1002137(2011). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; DS572724; EGY20402.1; -; Genomic_DNA. DR RefSeq; XP_009654083.1; XM_009655788.1. DR EnsemblFungi; EGY20402; EGY20402; VDAG_10031. DR GeneID; 20711494; -. DR KEGG; vda:VDAG_10031; -. DR InParanoid; G2XIP9; -. DR KO; K10844; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000001611; Unassembled WGS sequence. DR GO; GO:0005829; C:cytosol; IEA:EnsemblFungi. DR GO; GO:0000112; C:nucleotide-excision repair factor 3 complex; IEA:EnsemblFungi. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0000717; P:nucleotide-excision repair, DNA duplex unwinding; IEA:EnsemblFungi. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EGY20402.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000001611}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EGY20402.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EGY20402.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EGY20402.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000001611}. FT DOMAIN 7 274 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 240 267 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 772 AA; 88533 MW; B9D407BF56204829 CRC64; MKFFIDDLPV LFPYPRIYPE QYAYMCDLKS RSSMAETSPC QYADTALETL DAGGHCVLEM PSGTGKTVSL LSLIVAYQQH YPEHRKLIYC SRTMSEIEKA LAELRELMKY RTEQLGQEED LTAGFVKEKK DKGENVDVCV YHDNLDLLEP HNLIPNGVWT FDGLLRYGEQ HKQCPYFTSR RMMQYCNVII YSYHYLLDPK IAERVSRELS KDCIVVFDEA HNIDNVCIES LSTDITEDSL RKAARGAQNL DRKIAEMKQT DQEQLQNEYL KLVEGLRDAG EARQEDAFMA NPDDLLNEAV PGNIRRAEHF VAFLKRFIEY LKTRMKVRNT ISETPPSFLA HLKEFTFIEK KPLKFCAERL TSLVRTLELT NIEDYQPLQE VATFATLVAT YEKGFLLILE PFESEAAEVP NPVLHFTCLD AAIAIKPVFD RFSSVIITSG TISPLEMYPK MLGFSTVVQE SYSMTLARRS FLPMIVTRGS DQASVSTSFQ VRNEPSVVRN YGSLLTEFAK ITPDGMVVFF PSYLYMESII SMWQGMGILD EVWKYKLILV ETPDAQETSL ALETYRTACC NGRGAVLLCV ARGKVSEGID FDHQYGRAVL NIGVPFQYTE SRILKARLEF LRETYRIREN DFLSFDAMRH AAQCLGRVLR GKDDYGVMVL ADRRFQKKRV QLPKWINQGL LDADTNLSTD MAVSSARRFL KQMAQPFRAK DQEGVSTWSY EDLMRHKEKT ELDRIRDLED AANKNDQTQE FGGDDYGMDD DLDQDLMEID GF // ID G2Y2M6_BOTF4 Unreviewed; 770 AA. AC G2Y2M6; DT 16-NOV-2011, integrated into UniProtKB/TrEMBL. DT 16-NOV-2011, sequence version 1. DT 11-MAY-2016, entry version 28. DE SubName: Full=Similar to DNA repair helicase RAD3 {ECO:0000313|EMBL:CCD46916.1}; GN ORFNames=BofuT4_P038180.1 {ECO:0000313|EMBL:CCD46916.1}; OS Botryotinia fuckeliana (strain T4) (Noble rot fungus) (Botrytis OS cinerea). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; OC Helotiales; Sclerotiniaceae; Botrytis. OX NCBI_TaxID=999810 {ECO:0000313|EMBL:CCD46916.1, ECO:0000313|Proteomes:UP000008177}; RN [1] {ECO:0000313|Proteomes:UP000008177} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=T4 {ECO:0000313|Proteomes:UP000008177}; RX PubMed=21876677; DOI=10.1371/journal.pgen.1002230; RA Amselem J., Cuomo C.A., van Kan J.A.L., Viaud M., Benito E.P., RA Couloux A., Coutinho P.M., de Vries R.P., Dyer P.S., Fillinger S., RA Fournier E., Gout L., Hahn M., Kohn L., Lapalu N., Plummer K.M., RA Pradier J.-M., Quevillon E., Sharon A., Simon A., ten Have A., RA Tudzynski B., Tudzynski P., Wincker P., Andrew M., Anthouard V., RA Beever R.E., Beffa R., Benoit I., Bouzid O., Brault B., Chen Z., RA Choquer M., Collemare J., Cotton P., Danchin E.G., Da Silva C., RA Gautier A., Giraud C., Giraud T., Gonzalez C., Grossetete S., RA Gueldener U., Henrissat B., Howlett B.J., Kodira C., Kretschmer M., RA Lappartient A., Leroch M., Levis C., Mauceli E., Neuveglise C., RA Oeser B., Pearson M., Poulain J., Poussereau N., Quesneville H., RA Rascle C., Schumacher J., Segurens B., Sexton A., Silva E., Sirven C., RA Soanes D.M., Talbot N.J., Templeton M., Yandava C., Yarden O., RA Zeng Q., Rollins J.A., Lebrun M.-H., Dickman M.; RT "Genomic analysis of the necrotrophic fungal pathogens Sclerotinia RT sclerotiorum and Botrytis cinerea."; RL PLoS Genet. 7:E1002230-E1002230(2011). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FQ790285; CCD46916.1; -; Genomic_DNA. DR EnsemblFungi; CCD46916; CCD46916; BofuT4_P038180.1. DR InParanoid; G2Y2M6; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000008177; Unplaced contigs. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CCD46916.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000008177}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:CCD46916.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CCD46916.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CCD46916.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000008177}. FT DOMAIN 1 256 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 770 AA; 87720 MW; AF672DFB1A5AC9DA CRC64; MRTLDAGGHC VLEMPSGTGK TISLLSLIVA YQQYYPEHRK LIYCSRTMSE IEKALAELKA LMKYRAEQLG HQEDFRGLGL TSRKNLCLHP SVKREKSGAV VDARCRSLTA GFVKEKKERG EDVPVCIYHD NLDLLEPHNL IPNGVWTLDG IMRYGEEHKQ CPYFTSRRMM SFCNVIIYSY HYLLDPKIAE RVSKELSKDC IVVFDEAHNI DNVCIESLST DITDDSLRRA TRGAMNLESR ISDLRDSDSE KLKDEYAKLV EGLRGADEAR AEDAFMSNPA LPDDLLKEAV PGNIRRAEHF VVFLKRFIEY LKKTRMKVRQ VISETPASFL AHLKEYTYIE KKPLRFCAER LTSLVRTLEL TNIEDYQPLQ EVATFATLVA TYEKGFLLIL EPYESDTAEV PNPVLHFTCL DAAIAIKPVF ERFSSVIITS GTISPLEMYP KMLNFECVVQ ESYPMTLARR SFLPMIVTRG SDQVAISSGF QVRNEPAVVR NYGNLLTEMS KLTPDGMVVF FPSYLYMESI ISMWQGMGIL DEVWKYKLIL VETPDAQETS LALETYRTAC CNGRGAILLC VARGKVSEGI DFDHQYGRTV LCIGVPFQYT ESRILKARLE FLRETYRIRE NDFLSFDAMR HAAQCLGRVL RGKDDYGIMV LADRRFLKKR TQLPKWINQA ILDSEVNLST DMAVGSAKKF LRNMAQPFKA KDQEGISTWS LQDLEKFKEK QYEETLQALR GGGKGDPMDG IKNGNEQTVK EDEYGMDDDE MEASLMQLDA // ID G3AVS0_SPAPN Unreviewed; 792 AA. AC G3AVS0; DT 16-NOV-2011, integrated into UniProtKB/TrEMBL. DT 16-NOV-2011, sequence version 1. DT 11-MAY-2016, entry version 28. DE SubName: Full=DNA helicase component of transcription factor b {ECO:0000313|EMBL:EGW30235.1}; GN ORFNames=SPAPADRAFT_158868 {ECO:0000313|EMBL:EGW30235.1}; OS Spathaspora passalidarum (strain NRRL Y-27907 / 11-Y1). OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; OC Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Spathaspora. OX NCBI_TaxID=619300 {ECO:0000313|Proteomes:UP000000709}; RN [1] {ECO:0000313|EMBL:EGW30235.1, ECO:0000313|Proteomes:UP000000709} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=NRRL Y-27907 / 11-Y1 {ECO:0000313|Proteomes:UP000000709}; RX PubMed=21788494; DOI=10.1073/pnas.1103039108; RA Wohlbach D.J., Kuo A., Sato T.K., Potts K.M., Salamov A.A., RA LaButti K.M., Sun H., Clum A., Pangilinan J.L., Lindquist E.A., RA Lucas S., Lapidus A., Jin M., Gunawan C., Balan V., Dale B.E., RA Jeffries T.W., Zinkel R., Barry K.W., Grigoriev I.V., Gasch A.P.; RT "Comparative genomics of xylose-fermenting fungi for enhanced biofuel RT production."; RL Proc. Natl. Acad. Sci. U.S.A. 108:13212-13217(2011). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GL996506; EGW30235.1; -; Genomic_DNA. DR RefSeq; XP_007378001.1; XM_007377939.1. DR EnsemblFungi; EGW30235; EGW30235; SPAPADRAFT_158868. DR GeneID; 18871138; -. DR KEGG; spaa:SPAPADRAFT_158868; -. DR InParanoid; G3AVS0; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000000709; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EGW30235.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000000709}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EGW30235.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EGW30235.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EGW30235.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000000709}. FT DOMAIN 7 295 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 266 308 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 792 AA; 91189 MW; C368B32D18685E5C CRC64; MKFFIDDLPV LFPYPKIYPE QYAYMCDIKK TLDVGGNCIL EMPSGTGKTV SLLSLTVAYQ MHYPEQRKIV YCSRTMSEIE KALIELYKLM EYRANELGYV EDFRGLGLTS RKNLCLHPTI SKERKGVVVD EKCRRITNGQ LKNKIEKGMI SEQQQADNPE VNSLCSFHEN LEDMDQHDLI PPGVYSFDGL LKYCKQRGTC PYFTVRRMMP FCNIIIYSYH YLLDPKIADR VSKELSKDSI VIFDEAHNID NVCIESLSLD LTEDTLKRAT RGANKLGDAI EEMKAQDSEK LQNEYEQLVE GLRQAEIARN EELFMSNPIL PQDLLDEAIP GNIRKGEHFI AFLKRFIEYL KTRMKVLHVI SETPISFLKH LKELTYIDRK PLRFCSERLS LLVRTLELAE IEDFNALKDI ATFATLVSTY DTGFQLILEP YETEGSSVPN PILHFTCLDA SIAIKPVFER FYSIIITSGT ISPLDMYPKM LNFQTVIQES YAMTLARRSF LPMIVTKGSD QVSISSRFEI RNDPSVVRNY GSLLVEFSKI TPDGMVVFFP SYLYMESIIS MWQNMGVLDE VWKYKLILVE TPDAQETSLA LETYRKACSN GRGAVLLSVA RGKVSEGIDF DHHYGRTVLM IGIPFQYTES RILKARLEFM RDHFQIREND FLSFDAMRHA AQCLGRVLRG KDDYGIMVLA DRRFSRKKNQ LPKWIAQALN DSDTNLSTDM ALATAKRFLR SLAQPANPKD QEGVSVWNLE QLEEYQRKYE HKVQPIESEI AEEENNQEDN FMDIDDADLD LL // ID G3BDI5_CANTC Unreviewed; 797 AA. AC G3BDI5; DT 16-NOV-2011, integrated into UniProtKB/TrEMBL. DT 16-NOV-2011, sequence version 1. DT 11-MAY-2016, entry version 26. DE SubName: Full=DNA helicase component of transcription factor b {ECO:0000313|EMBL:EGV60308.1}; GN ORFNames=CANTEDRAFT_95758 {ECO:0000313|EMBL:EGV60308.1}; OS Candida tenuis (strain ATCC 10573 / BCRC 21748 / CBS 615 / JCM 9827 / OS NBRC 10315 / NRRL Y-1498 / VKM Y-70) (Yeast). OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; OC Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Yamadazyma; OC Yamadazyma/Candida clade. OX NCBI_TaxID=590646 {ECO:0000313|Proteomes:UP000000707}; RN [1] {ECO:0000313|EMBL:EGV60308.1, ECO:0000313|Proteomes:UP000000707} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 10573 / BCRC 21748 / CBS 615 / JCM 9827 / NBRC 10315 / RC NRRL Y-1498 / VKM Y-70 {ECO:0000313|Proteomes:UP000000707}; RX PubMed=21788494; DOI=10.1073/pnas.1103039108; RA Wohlbach D.J., Kuo A., Sato T.K., Potts K.M., Salamov A.A., RA LaButti K.M., Sun H., Clum A., Pangilinan J.L., Lindquist E.A., RA Lucas S., Lapidus A., Jin M., Gunawan C., Balan V., Dale B.E., RA Jeffries T.W., Zinkel R., Barry K.W., Grigoriev I.V., Gasch A.P.; RT "Comparative genomics of xylose-fermenting fungi for enhanced biofuel RT production."; RL Proc. Natl. Acad. Sci. U.S.A. 108:13212-13217(2011). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GL996528; EGV60308.1; -; Genomic_DNA. DR RefSeq; XP_006689522.1; XM_006689459.1. DR EnsemblFungi; EGV60308; EGV60308; CANTEDRAFT_95758. DR GeneID; 18250538; -. DR KEGG; cten:CANTEDRAFT_95758; -. DR KO; K10844; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000000707; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EGV60308.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000000707}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EGV60308.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EGV60308.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EGV60308.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000000707}. FT DOMAIN 7 295 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 266 308 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 797 AA; 91519 MW; 98972E5FABF2E57C CRC64; MKFYIDDLPV LFPYPKIYPE QYAYMCDIKK TLDVGGNCIL EMPSGTGKTV SLLSLTVAYQ MHYPEHRKVV YCSRTMSEIE KALIELYNLM EYRANELGFV EDFRGLGLTS RKNLCLHPTI SKERKGAVVD EKCRRITNGQ LKHRIEEGAI DEEAQRSNPE VNSLCKFHEN LYDYEQHDLI PPGVYSFESL MDFGREKSTC PYFTVRRMIP FCNIIIYSYH YLLDPKIAER VSKELSKDSI IIFDEAHNID NVCIESLSLD LTDDTLKRAT RGANKLSDAI EDMKAQDSEK LQNEYEKLVE GLRQAEIARD EELFMANPTL PQDLLDEAIP GNIRKGEHFV SFLKRFIEYL KTRMKVLHVI SETPNSFLQH LKELTFIDRK PLRFCSERLS LLVRTLELND IEDFTALKDI ATFATLVSTY DKGFQLILEP FETEGATVPN PILRFTCLDA SIAMKPVFDR FSSVIITSGT ISPLDMYPKM LNFETVIQRS YTMTLDRRSF LPMIVTKGSD QVSISSRFEI RNDPSVVRNY GSLLIEFSKI TPDGMVVFFP SYLYMESIIS MWQTMGVLDE VWKYKLILVE TPDAQETSLA LDTYRKACNS GRGAVLLSVA RGKVSEGIDF DHHYGRTVLM IGIPFQYTES RILKARLEFL RENNQIREND FLSFDAMRHA AQCLGRVLRG KDDYGIMVLA DRRFARKRSQ LPKWIAQALN DSDLNLSTDM ALANAKKFLR TLAQPTNPKD QEGVSVWDLQ QLQKHQQEQI KQLNEHSGNT GVSEDGVVSA PEDVDFMDMD DEELNML // ID G3HPE2_CRIGR Unreviewed; 108 AA. AC G3HPE2; DT 16-NOV-2011, integrated into UniProtKB/TrEMBL. DT 16-NOV-2011, sequence version 1. DT 13-APR-2016, entry version 17. DE SubName: Full=TFIIH basal transcription factor complex helicase subunit {ECO:0000313|EMBL:EGW05343.1}; GN ORFNames=I79_012652 {ECO:0000313|EMBL:EGW05343.1}; OS Cricetulus griseus (Chinese hamster) (Cricetulus barabensis griseus). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; OC Muroidea; Cricetidae; Cricetinae; Cricetulus. OX NCBI_TaxID=10029 {ECO:0000313|EMBL:EGW05343.1, ECO:0000313|Proteomes:UP000001075}; RN [1] {ECO:0000313|Proteomes:UP000001075} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=CHO K1 cell line {ECO:0000313|Proteomes:UP000001075}; RX PubMed=21804562; DOI=10.1038/nbt.1932; RA Xu X., Nagarajan H., Lewis N.E., Pan S., Cai Z., Liu X., Chen W., RA Xie M., Wang W., Hammond S., Andersen M.R., Neff N., Passarelli B., RA Koh W., Fan H.C., Wang J., Gui Y., Lee K.H., Betenbaugh M.J., RA Quake S.R., Famili I., Palsson B.O., Wang J.; RT "The genomic sequence of the Chinese hamster ovary (CHO)-K1 cell RT line."; RL Nat. Biotechnol. 29:735-741(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; JH000571; EGW05343.1; -; Genomic_DNA. DR InParanoid; G3HPE2; -. DR Proteomes; UP000001075; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:InterPro. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR InterPro; IPR010643; HBB. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06777; HBB; 1. DR PRINTS; PR00852; XRODRMPGMNTD. PE 4: Predicted; KW ATP-binding {ECO:0000313|EMBL:EGW05343.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000001075}; KW Helicase {ECO:0000313|EMBL:EGW05343.1}; KW Hydrolase {ECO:0000313|EMBL:EGW05343.1}; KW Nucleotide-binding {ECO:0000313|EMBL:EGW05343.1}; KW Reference proteome {ECO:0000313|Proteomes:UP000001075}. FT DOMAIN 26 67 HBB. {ECO:0000259|Pfam:PF06777}. SQ SEQUENCE 108 AA; 12043 MW; 929C6B547A96EECF CRC64; MSVNLTRRTL DRCQSNLDTL QKTVLRIKET DEQRLRDEYQ RLVEGLREAS AARETDAHLA NPVLPDERPC QAPSALPSTS WASCGGCWST SSGGCACSMW YRRALLPS // ID G3JPU0_CORMM Unreviewed; 709 AA. AC G3JPU0; DT 16-NOV-2011, integrated into UniProtKB/TrEMBL. DT 16-NOV-2011, sequence version 1. DT 11-MAY-2016, entry version 27. DE SubName: Full=DNA repair helicase RAD3 {ECO:0000313|EMBL:EGX89191.1}; GN ORFNames=CCM_07443 {ECO:0000313|EMBL:EGX89191.1}; OS Cordyceps militaris (strain CM01) (Caterpillar fungus). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; OC Sordariomycetes; Hypocreomycetidae; Hypocreales; Cordycipitaceae; OC Cordyceps. OX NCBI_TaxID=983644 {ECO:0000313|EMBL:EGX89191.1, ECO:0000313|Proteomes:UP000001610}; RN [1] {ECO:0000313|EMBL:EGX89191.1, ECO:0000313|Proteomes:UP000001610} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=CM01 {ECO:0000313|EMBL:EGX89191.1, RC ECO:0000313|Proteomes:UP000001610}; RX PubMed=22112802; DOI=10.1186/gb-2011-12-11-r116; RA Zheng P., Xia Y., Xiao G., Xiong C., Hu X., Zhang S., Zheng H., RA Huang Y., Zhou Y., Wang S., Zhao G.P., Liu X., St Leger R.J., Wang C.; RT "Genome sequence of the insect pathogenic fungus Cordyceps militaris, RT a valued traditional Chinese medicine."; RL Genome Biol. 12:R116-R116(2011). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; JH126404; EGX89191.1; -; Genomic_DNA. DR RefSeq; XP_006672647.1; XM_006672584.1. DR EnsemblFungi; EGX89191; EGX89191; CCM_07443. DR GeneID; 18169454; -. DR KEGG; cmt:CCM_07443; -. DR InParanoid; G3JPU0; -. DR KO; K10844; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000001610; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EGX89191.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000001610}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EGX89191.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EGX89191.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EGX89191.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000001610}. FT DOMAIN 1 201 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 172 217 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 709 AA; 81359 MW; E686D4BEE4B2E219 CRC64; MSEIEKALME LEALMKYRTE QLGYEEDFRG LGLTSRKNLC LHPSVKREKS GSVVDARCRS LTAGFVKEKK ERGEDNLDLL ESHNLIPNGV WTFDGILRYG EENKQCPYFT ARRMMQYCNV VIFSYHYLLD PKIAERVSKD FSKDCIVVFD EAHNIDNVCI ESLSTDITEE SLRRATRGAQ NLKQKIADMR ETDQEQLQNE YEKLVQGLRE ADEARQEDAF MANPVLPEEL LKEAVPGNIR RAEHFVSFLQ RFIEYLKTRM KVRQVISETP PSFLAHLKEH TFIEKKPLGF CAERLTSLVR TLELTNIEDY QPLQEVATFA TLVATYEKGF LLILEPYESD TAEVPNPILH FTCLDAAIAI RPIFDRFYSV IITSGTISPL EMYPKMLDFS TVIQESYSMT LARRSFLPMI VTRGSDQASI STSFQVRNEP SVVRNYGNLL TEFAKITPDG LVVFFPSYLY MESIISMWQG MGILDEVWKY KLILVETPDA QETSLALETY RTACCNGRGA ILLCVARGKV SEGIDFDHQY GRTVLCIGVP FQYTESRILK ARLEFLRETY RIKENDFLSF DAMRHAAQCL GRVLRGKDDY GIMVLADRRF QKKRPQLPKW INQGLMDVDV NLSTDMAVSS ARRFLKTMAQ PFRAKEQEGI STWGYEDLER KATLDREEAR KAEEAAVKAA QLAAMQGSNN DCEFDDEDLD QDMMELEGF // ID G3PFN5_GASAC Unreviewed; 815 AA. AC G3PFN5; DT 16-NOV-2011, integrated into UniProtKB/TrEMBL. DT 16-NOV-2011, sequence version 1. DT 11-MAY-2016, entry version 33. DE SubName: Full=Uncharacterized protein {ECO:0000313|Ensembl:ENSGACP00000016409}; DE Flags: Fragment; OS Gasterosteus aculeatus (Three-spined stickleback). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; OC Eupercaria; Perciformes; Cottioidei; Gasterosteales; Gasterosteidae; OC Gasterosteus. OX NCBI_TaxID=69293 {ECO:0000313|Ensembl:ENSGACP00000016409, ECO:0000313|Proteomes:UP000007635}; RN [1] {ECO:0000313|Ensembl:ENSGACP00000016409} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RA Lindblad-Toh K., Mauceli E., Grabherr M., Chang J.L., Lander E.S.; RL Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases. RN [2] {ECO:0000313|Ensembl:ENSGACP00000016409} RP IDENTIFICATION. RG Ensembl; RL Submitted (SEP-2011) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an Ensembl CC automatic analysis pipeline and should be considered as CC preliminary data. {ECO:0000313|Ensembl:ENSGACP00000016409}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR STRING; 69293.ENSGACP00000016409; -. DR Ensembl; ENSGACT00000016441; ENSGACP00000016409; ENSGACG00000012407. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR GeneTree; ENSGT00550000075092; -. DR InParanoid; G3PFN5; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG70W3CM; -. DR TreeFam; TF101232; -. DR Proteomes; UP000007635; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000007635}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000007635}. FT DOMAIN 7 337 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT NON_TER 1 1 {ECO:0000313|Ensembl:ENSGACP00000016409}. SQ SEQUENCE 815 AA; 92961 MW; FD83BC74F229F3C5 CRC64; SRLNIEGLLV YFPYDYIYPE QYSYMLELKR TLDARGHGVL EMPSGTGKTI SLLSLIVAYQ KASPLEVTKL IYCSRTVPEI EKASQCENII TLPPQFKKHL SSQVVEELRK LMEYYSKQTG ESNNFMALAL SSRKNLCIHP EVSALRFGKE VDGKCHTLTA SYIRAQRHSD PDVPVCRFYE VRSRPNASTS DQLCEASLFV PKDVFFTGYF GDFDAVGRQV PLPAGIYNLD DLKDFGRRKG WCPYYLARYS LLHANIVVYS YHYLLDPKIA DLVSKELAKK SVVVFDEAHN IDNVCIDSMS VNITRRTLDR CQGNVDTLHN AIQKIKETDA EKLKMEYRRL VEGLKEANVA RETDVYLANP VLPDEILKEA VPGTIRTAEH FVGFLKRFLE YLKSRLRVHH VVQESTPQFL KDIFDKVCID RKPLRFCSER LQSLLRTLEI ADIADFSAVT LISNFATLVS TYSQGFTIII EPFEDRTPTI ANPVLHFSCM DPSIAIKPVF QRFQSVIITS GTLSPLDIYP RILDFRPVTM ASFTMTLART CLCPLIVGRG NDQVALSSKF ETREDFAVIR NYGNLLLEMS AIVPDGIVAF FTSYVYMENI VASWYEQGIL ENIQRNKLIF IETPDAAETS MALEKYQEAC ENGRGAILLS VARGKVSEGI DFVHHFGRAV IMFGVPYVYT QSRILKARLE YLRDQFQIRE NDFLTFDAMR HAAQCVGRVI RGKTDYGIMI FADKRYARAD KRGKLPRWIQ EHINDGSLNL TVDETVQLSK HFLRQMAQPF RQVRRTTHFA AIPGGRQKTN VCFATVQSHF ILNLN // ID G3PFN8_GASAC Unreviewed; 739 AA. AC G3PFN8; DT 16-NOV-2011, integrated into UniProtKB/TrEMBL. DT 16-NOV-2011, sequence version 1. DT 11-MAY-2016, entry version 29. DE SubName: Full=Uncharacterized protein {ECO:0000313|Ensembl:ENSGACP00000016412}; DE Flags: Fragment; OS Gasterosteus aculeatus (Three-spined stickleback). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; OC Eupercaria; Perciformes; Cottioidei; Gasterosteales; Gasterosteidae; OC Gasterosteus. OX NCBI_TaxID=69293 {ECO:0000313|Ensembl:ENSGACP00000016412, ECO:0000313|Proteomes:UP000007635}; RN [1] {ECO:0000313|Ensembl:ENSGACP00000016412} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RA Lindblad-Toh K., Mauceli E., Grabherr M., Chang J.L., Lander E.S.; RL Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases. RN [2] {ECO:0000313|Ensembl:ENSGACP00000016412} RP IDENTIFICATION. RG Ensembl; RL Submitted (SEP-2011) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an Ensembl CC automatic analysis pipeline and should be considered as CC preliminary data. {ECO:0000313|Ensembl:ENSGACP00000016412}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR Ensembl; ENSGACT00000016444; ENSGACP00000016412; ENSGACG00000012407. DR GeneTree; ENSGT00550000075092; -. DR Proteomes; UP000007635; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000007635}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000007635}. FT DOMAIN 7 264 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT NON_TER 1 1 {ECO:0000313|Ensembl:ENSGACP00000016412}. SQ SEQUENCE 739 AA; 84556 MW; FCD396DDA2D74064 CRC64; SRLNIEGLLV YFPYDYIYPE QYSYMLELKR TLDARGHGVL EMPSGTGKTI SLLSLIVAYQ KVVEELRKLM EYYSKQTGES NNFMALALSS RKNLCIHPEV SALRFGKEVD GKCHTLTASY IRAQRHSDPD VPVCRFYEDF DAVGRQVPLP AGIYNLDDLK DFGRRKGWCP YYLARYSLLH ANIVVYSYHY LLDPKIADLV SKELAKKSVV VFDEAHNIDN VCIDSMSVNI TRRTLDRCQG NVDTLHNAIQ KIKETDAEKL KMEYRRLVEG LKEANVARET DVYLANPVLP DEILKEAVPG TIRTAEHFVG FLKRFLEYLK SRLRVHHVVQ ESTPQFLKDI FDKVCIDRKP LRFCSERLQS LLRTLEIADI ADFSAVTLIS NFATLVSTYS QGFTIIIEPF EDRTPTIANP VLHFSCMDPS IAIKPVFQRF QSVIITSGTL SPLDIYPRIL DFRPVTMASF TMTLARTCLC PLIVGRGNDQ VALSSKFETR EDFAVIRNYG NLLLEMSAIV PDGIVAFFTS YVYMENIVAS WYEQGILENI QRNKLIFIET PDAAETSMAL EKYQEACENG RGAILLSVAR GKVSEGIDFV HHFGRAVIMF GVPYVYTQSR ILKARLEYLR DQFQIRENDF LTFDAMRHAA QCVGRVIRGK TDYGIMIFAD KRYARADKRG KLPRWIQEHI NDGSLNLTVD ETVQLSKHFL RQMAQPFRQE DQLGLSLLTL EQLESEEMLK KISQIAHQT // ID G3RIG3_GORGO Unreviewed; 760 AA. AC G3RIG3; DT 16-NOV-2011, integrated into UniProtKB/TrEMBL. DT 16-NOV-2011, sequence version 1. DT 11-MAY-2016, entry version 34. DE SubName: Full=Uncharacterized protein {ECO:0000313|Ensembl:ENSGGOP00000015465}; GN Name=ERCC2 {ECO:0000313|Ensembl:ENSGGOP00000015465}; OS Gorilla gorilla gorilla (Western lowland gorilla). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; OC Catarrhini; Hominidae; Gorilla. OX NCBI_TaxID=9595 {ECO:0000313|Ensembl:ENSGGOP00000015465, ECO:0000313|Proteomes:UP000001519}; RN [1] {ECO:0000313|Ensembl:ENSGGOP00000015465, ECO:0000313|Proteomes:UP000001519} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RA Scally A.; RT "Insights into the evolution of the great apes provided by the gorilla RT genome."; RL Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases. RN [2] {ECO:0000313|Ensembl:ENSGGOP00000015465} RP IDENTIFICATION. RG Ensembl; RL Submitted (SEP-2011) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an Ensembl CC automatic analysis pipeline and should be considered as CC preliminary data. {ECO:0000313|Ensembl:ENSGGOP00000015465}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR RefSeq; XP_004061004.1; XM_004060956.1. DR Ensembl; ENSGGOT00000015910; ENSGGOP00000015465; ENSGGOG00000015842. DR GeneID; 101125820; -. DR KEGG; ggo:101125820; -. DR CTD; 2068; -. DR GeneTree; ENSGT00550000075092; -. DR InParanoid; G3RIG3; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG70W3CM; -. DR TreeFam; TF101232; -. DR Proteomes; UP000001519; Chromosome 19. DR GO; GO:0019907; C:cyclin-dependent protein kinase activating kinase holoenzyme complex; IEA:Ensembl. DR GO; GO:0005737; C:cytoplasm; IEA:Ensembl. DR GO; GO:0005675; C:holo TFIIH complex; IEA:Ensembl. DR GO; GO:0071817; C:MMXD complex; IEA:Ensembl. DR GO; GO:0043139; F:5'-3' DNA helicase activity; IEA:Ensembl. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0008353; F:RNA polymerase II carboxy-terminal domain kinase activity; IEA:Ensembl. DR GO; GO:0007568; P:aging; IEA:Ensembl. DR GO; GO:0006915; P:apoptotic process; IEA:Ensembl. DR GO; GO:0030282; P:bone mineralization; IEA:Ensembl. DR GO; GO:0008283; P:cell proliferation; IEA:Ensembl. DR GO; GO:0032289; P:central nervous system myelin formation; IEA:Ensembl. DR GO; GO:0007059; P:chromosome segregation; IEA:Ensembl. DR GO; GO:0040016; P:embryonic cleavage; IEA:Ensembl. DR GO; GO:0043249; P:erythrocyte maturation; IEA:Ensembl. DR GO; GO:0030198; P:extracellular matrix organization; IEA:Ensembl. DR GO; GO:0035315; P:hair cell differentiation; IEA:Ensembl. DR GO; GO:0048820; P:hair follicle maturation; IEA:Ensembl. DR GO; GO:0060218; P:hematopoietic stem cell differentiation; IEA:Ensembl. DR GO; GO:0001701; P:in utero embryonic development; IEA:Ensembl. DR GO; GO:0035264; P:multicellular organism growth; IEA:Ensembl. DR GO; GO:0033683; P:nucleotide-excision repair, DNA incision; IEA:Ensembl. DR GO; GO:0043388; P:positive regulation of DNA binding; IEA:Ensembl. DR GO; GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IEA:Ensembl. DR GO; GO:0009791; P:post-embryonic development; IEA:Ensembl. DR GO; GO:1901990; P:regulation of mitotic cell cycle phase transition; IEA:Ensembl. DR GO; GO:0006979; P:response to oxidative stress; IEA:Ensembl. DR GO; GO:0021510; P:spinal cord development; IEA:Ensembl. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:Ensembl. DR GO; GO:0006283; P:transcription-coupled nucleotide-excision repair; IEA:Ensembl. DR GO; GO:0009650; P:UV protection; IEA:Ensembl. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000001519}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000001519}. FT DOMAIN 7 283 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 77 100 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 760 AA; 86909 MW; 7470FA88CDF2E331 CRC64; MKLNVDGLLV YFPYDYIYPE QFSYMRELKR TLDAKGHGVL EMPSGTGKTV SLLALIMAYQ RAYPLEVTKL IYCSRTVPEI EKVIEELRKL LNFYEKQEGE KLPFLGLALS SRKNLCIHPE VTPLRFGKDV DGKCHSLTAS YVRAQYQHDT SLPHCRFYEE FDAHGREVPL PAGIYNLDDL KALGRRQGWC PYFLARYSIL HANVVVYSYH YLLDPKIADL VSKELARKAV VVFDEAHNID NVCIDSMSVN LTRRTLDRCQ GNLETLQKTV LRIKETDEQR LRDEYRRLVE GLREASAARE TDAHLANPVL PDEVLQEAVP GSIRTAEHFL GFLRRLLEYV KWRLRVQHVV QESPPAFLSG LAQRVCIQRK PLRFCAERLR SLLHTLEITD LADFSPLTLL ANFATLVSTY AKGFTIIIEP FDDRTPTIAN PILHFSCMDA SLAIKPVFER FQSVIITSGT LSPLDIYPKI LDFHPVTMAT FTMTLARVCL CPMIIGRGND QVAISSKFET REDIAVIRNY GNLLLEMSAV VPDGIVAFFT SYQYMESTVA SWYEQGILEN IQRNKLLFIE TQDGAETSVA LEKYQEACEN GRGAILLSVA RGKVSEGIDF VHHYGRAVIM FGVPYVYTQS RILKARLEYL RDQFQIREND FLTFDAMRHA AQCVGRAIRG KTDYGLMVFA DKRFARGDKR GKLPRWIQEH LTDANLNLTV DEGVQVAKYF LRQMAQPFHR EDQLGLSLLS LEQLESEETL QRIEQIAQQL // ID G3SZ20_LOXAF Unreviewed; 760 AA. AC G3SZ20; DT 16-NOV-2011, integrated into UniProtKB/TrEMBL. DT 16-NOV-2011, sequence version 1. DT 11-MAY-2016, entry version 35. DE SubName: Full=Uncharacterized protein {ECO:0000313|Ensembl:ENSLAFP00000005787}; DE Flags: Fragment; GN Name=ERCC2 {ECO:0000313|Ensembl:ENSLAFP00000005787}; OS Loxodonta africana (African elephant). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta. OX NCBI_TaxID=9785 {ECO:0000313|Ensembl:ENSLAFP00000005787, ECO:0000313|Proteomes:UP000007646}; RN [1] {ECO:0000313|Ensembl:ENSLAFP00000005787} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Isolate ISIS603380 {ECO:0000313|Ensembl:ENSLAFP00000005787}; RA Di Palma F., Heiman D., Young S., Johnson J., Lander E.S., RA Lindblad-Toh K.; RT "The Genome Sequence of Loxodonta africana (African elephant)."; RL Submitted (JUN-2009) to the EMBL/GenBank/DDBJ databases. RN [2] {ECO:0000313|Ensembl:ENSLAFP00000005787} RP IDENTIFICATION. RG Ensembl; RL Submitted (SEP-2011) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an Ensembl CC automatic analysis pipeline and should be considered as CC preliminary data. {ECO:0000313|Ensembl:ENSLAFP00000005787}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR STRING; 9785.ENSLAFP00000005787; -. DR Ensembl; ENSLAFT00000006890; ENSLAFP00000005787; ENSLAFG00000006888. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR GeneTree; ENSGT00550000075092; -. DR InParanoid; G3SZ20; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG70W3CM; -. DR TreeFam; TF101232; -. DR Proteomes; UP000007646; Unassembled WGS sequence. DR GO; GO:0019907; C:cyclin-dependent protein kinase activating kinase holoenzyme complex; IEA:Ensembl. DR GO; GO:0005737; C:cytoplasm; IEA:Ensembl. DR GO; GO:0005675; C:holo TFIIH complex; IEA:Ensembl. DR GO; GO:0071817; C:MMXD complex; IEA:Ensembl. DR GO; GO:0043139; F:5'-3' DNA helicase activity; IEA:Ensembl. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0008353; F:RNA polymerase II carboxy-terminal domain kinase activity; IEA:Ensembl. DR GO; GO:0007568; P:aging; IEA:Ensembl. DR GO; GO:0006915; P:apoptotic process; IEA:Ensembl. DR GO; GO:0030282; P:bone mineralization; IEA:Ensembl. DR GO; GO:0008283; P:cell proliferation; IEA:Ensembl. DR GO; GO:0032289; P:central nervous system myelin formation; IEA:Ensembl. DR GO; GO:0007059; P:chromosome segregation; IEA:Ensembl. DR GO; GO:0040016; P:embryonic cleavage; IEA:Ensembl. DR GO; GO:0043249; P:erythrocyte maturation; IEA:Ensembl. DR GO; GO:0030198; P:extracellular matrix organization; IEA:Ensembl. DR GO; GO:0035315; P:hair cell differentiation; IEA:Ensembl. DR GO; GO:0048820; P:hair follicle maturation; IEA:Ensembl. DR GO; GO:0060218; P:hematopoietic stem cell differentiation; IEA:Ensembl. DR GO; GO:0001701; P:in utero embryonic development; IEA:Ensembl. DR GO; GO:0035264; P:multicellular organism growth; IEA:Ensembl. DR GO; GO:0033683; P:nucleotide-excision repair, DNA incision; IEA:Ensembl. DR GO; GO:0043388; P:positive regulation of DNA binding; IEA:Ensembl. DR GO; GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IEA:Ensembl. DR GO; GO:0009791; P:post-embryonic development; IEA:Ensembl. DR GO; GO:1901990; P:regulation of mitotic cell cycle phase transition; IEA:Ensembl. DR GO; GO:0006979; P:response to oxidative stress; IEA:Ensembl. DR GO; GO:0021510; P:spinal cord development; IEA:Ensembl. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:Ensembl. DR GO; GO:0006283; P:transcription-coupled nucleotide-excision repair; IEA:Ensembl. DR GO; GO:0009650; P:UV protection; IEA:Ensembl. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 2. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000007646}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000007646}. FT DOMAIN 7 283 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 77 100 {ECO:0000256|SAM:Coils}. FT NON_TER 1 1 {ECO:0000313|Ensembl:ENSLAFP00000005787}. SQ SEQUENCE 760 AA; 86917 MW; 9E27A2F2F87704D9 CRC64; NRLNVDGLLV YFPYDYIYPE QFSYMLELKR TLDAKGHGVL EMPSGTGKTV SLLALIMAYQ RAYPLEVTKL IYCSRTVPEI EKVIEELRKL LNFYEKQEGE KLPFLGLALS SRKNLCIHPE VTPLRFGKDV DGKCHSLTAS YVRAQYQQDS SLPHCSFYEE FDTHGRQVPL SAGIYNLDDL KALGRRQGWC PYFLARYSIL HANVVVYSYH YLLDPKIADL VSKELARKAV VVFDEAHNID NVCIDSMSVN ITRRTLDRCQ GNLETLQKTV LRIKETDEQR LREEYRRLVE GLREASAARE TDAHLANPVL PDEVLQEAVP GSIRTAEHFL GFLRRLLEYV KWRLRVQHVV QESPPAFLSG LAQRVCIQRK PLRFCAERLR SLLHTLEIAD LADFSPLTLL ANFATLVSTY AKGFTIIIEP FDDRTPTIAN PILHFSCMDA SLAIKPVFER FQSVIITSGT LSPLDIYPKI LDFHPVTMAT FTMTLARVCL CPMIIGRGND QVAISSKFET REDIAVIRNY GNLLLEMSAV VPDGIVAFFT SYQYMESTVA SWYEQGILEN IQRNKLLFIE TQDGAETSVA LEKYQEGWEK GRGGIPVSSA RGKMSEGNEF LHHYGRAVIM FGVPYVYTQS RILKARLEYL RDQFQIREND FLTFDAMRHA AQCVGRAIRG KTDYGLMVFA DKRFARADKR GKLPRWIQEH LTDANLNLTV DEGVQVAKYF LRQMAQPFHR EDQLGLSLLS LEQLQSEETL RRIEQIAQQL // ID G3VGZ6_SARHA Unreviewed; 661 AA. AC G3VGZ6; DT 16-NOV-2011, integrated into UniProtKB/TrEMBL. DT 16-NOV-2011, sequence version 1. DT 11-MAY-2016, entry version 28. DE SubName: Full=Uncharacterized protein {ECO:0000313|Ensembl:ENSSHAP00000002450}; DE Flags: Fragment; GN Name=ERCC2 {ECO:0000313|Ensembl:ENSSHAP00000002450}; OS Sarcophilus harrisii (Tasmanian devil) (Sarcophilus laniarius). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus. OX NCBI_TaxID=9305 {ECO:0000313|Ensembl:ENSSHAP00000002450, ECO:0000313|Proteomes:UP000007648}; RN [1] {ECO:0000313|Ensembl:ENSSHAP00000002450} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RX PubMed=21709235; DOI=10.1073/pnas.1102838108; RA Miller W., Hayes V.M., Ratan A., Petersen D.C., Wittekindt N.E., RA Miller J., Walenz B., Knight J., Qi J., Zhao F., Wang Q., RA Bedoya-Reina O.C., Katiyar N., Tomsho L.P., Kasson L.M., Hardie R.A., RA Woodbridge P., Tindall E.A., Bertelsen M.F., Dixon D., Pyecroft S., RA Helgen K.M., Lesk A.M., Pringle T.H., Patterson N., Zhang Y., RA Kreiss A., Woods G.M., Jones M.E., Schuster S.C.; RT "Genetic diversity and population structure of the endangered RT marsupial Sarcophilus harrisii (Tasmanian devil)."; RL Proc. Natl. Acad. Sci. U.S.A. 108:12348-12353(2011). RN [2] {ECO:0000313|Ensembl:ENSSHAP00000002450} RP IDENTIFICATION. RG Ensembl; RL Submitted (SEP-2011) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an Ensembl CC automatic analysis pipeline and should be considered as CC preliminary data. {ECO:0000313|Ensembl:ENSSHAP00000002450}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AEFK01145269; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AEFK01145270; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AEFK01145271; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AEFK01145272; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AEFK01145273; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR STRING; 9305.ENSSHAP00000002450; -. DR Ensembl; ENSSHAT00000002476; ENSSHAP00000002450; ENSSHAG00000002169. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR GeneTree; ENSGT00550000075092; -. DR InParanoid; G3VGZ6; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG70W3CM; -. DR TreeFam; TF101232; -. DR Proteomes; UP000007648; Unassembled WGS sequence. DR GO; GO:0019907; C:cyclin-dependent protein kinase activating kinase holoenzyme complex; IEA:Ensembl. DR GO; GO:0005737; C:cytoplasm; IEA:Ensembl. DR GO; GO:0005675; C:holo TFIIH complex; IEA:Ensembl. DR GO; GO:0071817; C:MMXD complex; IEA:Ensembl. DR GO; GO:0043139; F:5'-3' DNA helicase activity; IEA:Ensembl. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0008353; F:RNA polymerase II carboxy-terminal domain kinase activity; IEA:Ensembl. DR GO; GO:0007568; P:aging; IEA:Ensembl. DR GO; GO:0006915; P:apoptotic process; IEA:Ensembl. DR GO; GO:0030282; P:bone mineralization; IEA:Ensembl. DR GO; GO:0008283; P:cell proliferation; IEA:Ensembl. DR GO; GO:0032289; P:central nervous system myelin formation; IEA:Ensembl. DR GO; GO:0007059; P:chromosome segregation; IEA:Ensembl. DR GO; GO:0040016; P:embryonic cleavage; IEA:Ensembl. DR GO; GO:0043249; P:erythrocyte maturation; IEA:Ensembl. DR GO; GO:0030198; P:extracellular matrix organization; IEA:Ensembl. DR GO; GO:0035315; P:hair cell differentiation; IEA:Ensembl. DR GO; GO:0048820; P:hair follicle maturation; IEA:Ensembl. DR GO; GO:0060218; P:hematopoietic stem cell differentiation; IEA:Ensembl. DR GO; GO:0001701; P:in utero embryonic development; IEA:Ensembl. DR GO; GO:0035264; P:multicellular organism growth; IEA:Ensembl. DR GO; GO:0033683; P:nucleotide-excision repair, DNA incision; IEA:Ensembl. DR GO; GO:0043388; P:positive regulation of DNA binding; IEA:Ensembl. DR GO; GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IEA:Ensembl. DR GO; GO:0009791; P:post-embryonic development; IEA:Ensembl. DR GO; GO:1901990; P:regulation of mitotic cell cycle phase transition; IEA:Ensembl. DR GO; GO:0006979; P:response to oxidative stress; IEA:Ensembl. DR GO; GO:0021510; P:spinal cord development; IEA:Ensembl. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:Ensembl. DR GO; GO:0006283; P:transcription-coupled nucleotide-excision repair; IEA:Ensembl. DR GO; GO:0009650; P:UV protection; IEA:Ensembl. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 3. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000007648}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Reference proteome {ECO:0000313|Proteomes:UP000007648}. FT DOMAIN 1 245 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT NON_TER 1 1 {ECO:0000313|Ensembl:ENSSHAP00000002450}. SQ SEQUENCE 661 AA; 73060 MW; B6C584DAE4BA6259 CRC64; QGHGVLEMPS GTGKTISLLA LIVAYQRAHP LEVTKLIYCS RTVPEIEKXP GHLIELAVRD AGVLLALGPH IGGRQAVTLP VHVLPKPQGG HLQRDLPALP VTRVWGQRQR DCSSPQTTVL GEFDALGRQT PIPWGIYNLD DLKAFGRQKG WCPYFLARYS ILHANVIVYS YHYLLDPKIA DLVSKELARK AVVVFDEAHN IDNVCIDSLR GNLTRRTLDR CQSNLETLQR TVHKIKETDE KRLREEYHRL VEGLREASLA RETDAHLANP VLPDEVLQGE RGPEVVPGLG LPLCQSLPDR MAPRALLPGM RCCACVVGRV LAQAGPRGSS SWILNNGGWG SRSPAPHLSL PGAGFTIIIE PFDERTPTIA NPVLHFSCMD ASLAIKPVFE RFQSVIITSG TLSPLDIYPK ILDFHPVTMA TFTMTLARVC LCPMIVGRGN DQVAISSKFE TREDIGILKV SRRCRCGGGG IRAFHPRMRV GRGLQMGGLS PQSPDSGAAE AGRAERAGPA PVRGPWVCAP AQGDWGGGVS PLPPQARLEF LRDQFQIREN DFLTFDAMRH AAQCVGRAIR GKTDYGLMIF ADKRFARADK RGKLPRWIQE HLTDANLNLT VDEGVQVAKY FLRQMAQPFH REDQLGLSLL SLEQLQSEET LRRIEQIAQQ L // ID G3YEQ3_ASPNA Unreviewed; 811 AA. AC G3YEQ3; DT 14-DEC-2011, integrated into UniProtKB/TrEMBL. DT 14-DEC-2011, sequence version 1. DT 11-MAY-2016, entry version 27. DE SubName: Full=DNA repair helicase, subunit of TFIIH {ECO:0000313|EMBL:EHA18240.1}; GN ORFNames=ASPNIDRAFT_38157 {ECO:0000313|EMBL:EHA18240.1}; OS Aspergillus niger (strain ATCC 1015 / CBS 113.46 / FGSC A1144 / LSHB OS Ac4 / NCTC 3858a / NRRL 328 / USDA 3528.7). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; OC Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus. OX NCBI_TaxID=380704 {ECO:0000313|EMBL:EHA18240.1, ECO:0000313|Proteomes:UP000009038}; RN [1] {ECO:0000313|EMBL:EHA18240.1, ECO:0000313|Proteomes:UP000009038} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 1015 / CBS 113.46 / FGSC A1144 / LSHB Ac4 / NCTC 3858a / RC NRRL 328 / USDA 3528.7 {ECO:0000313|Proteomes:UP000009038}; RX PubMed=21543515; DOI=10.1101/gr.112169.110; RA Andersen M.R., Salazar M.P., Schaap P.J., van de Vondervoort P.J., RA Culley D., Thykaer J., Frisvad J.C., Nielsen K.F., Albang R., RA Albermann K., Berka R.M., Braus G.H., Braus-Stromeyer S.A., RA Corrochano L.M., Dai Z., van Dijck P.W., Hofmann G., Lasure L.L., RA Magnuson J.K., Menke H., Meijer M., Meijer S.L., Nielsen J.B., RA Nielsen M.L., van Ooyen A.J., Pel H.J., Poulsen L., Samson R.A., RA Stam H., Tsang A., van den Brink J.M., Atkins A., Aerts A., RA Shapiro H., Pangilinan J., Salamov A., Lou Y., Lindquist E., Lucas S., RA Grimwood J., Grigoriev I.V., Kubicek C.P., Martinez D., van Peij N.N., RA Roubos J.A., Nielsen J., Baker S.E.; RT "Comparative genomics of citric-acid-producing Aspergillus niger ATCC RT 1015 versus enzyme-producing CBS 513.88."; RL Genome Res. 21:885-897(2011). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:EHA18240.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ACJE01000021; EHA18240.1; -; Genomic_DNA. DR EnsemblFungi; EHA18240; EHA18240; ASPNIDRAFT_38157. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000009038; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EHA18240.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000009038}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EHA18240.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EHA18240.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EHA18240.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000009038}. FT DOMAIN 7 293 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 258 285 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 811 AA; 92409 MW; 52552F72660CCC65 CRC64; MKFFIDDLPV LFPYPRIYPE QYAYMCDLKK TLDAGGHCVL EMPSGTGKTV SLLSLIVAYQ QHYPEHRKLI YCSRTMSEIE KALAELKALM KFRAKELGYT EDFRALGLTS RKNLCLHPSV KREKSGAVVD ARCRSLTAGF VKEKKERGED VELCVYHENL DLLEPHNLVP PGVFTLDGLL KYGEEHKQCP YFSARRMLLQ AYSQIVQMPF CNVIIYSYHY LLDPKIAERV SRELSKDCIV VFDEAHNIDN VCIESLSIDL TEDSLRKATR GANNLERKIN EMKTSDAEKL QNEYSKLVEG LQAAEQAREE DQFISNPVLP DDLLKEAVPG NIRRAEHFVS FLKRFIEYLK TRMKVMHTIS ETPPSFLTHV KDLTYIERKP LRFCAERLTS LVRTLELINI EDYQPLQEVA TFATLVATYE KGFLLILEPF ESEAATVPNP VLHFTCLDAA IAIKPVFERF SSVIITSGTL SPLEMYPKML GFNAVMQESY SMTLARRSFL PMIVTRGSDQ AQISSSFQIR NDPGVVRNYG NLVLEFSRIT PDGVVVFFPS YLYMESIISM WQGMGILDSI WNYKLILVET PDAQESSLAL ETYRTACCNG RGALLLCVAR GKVSEGIDFD HHYGRAVINI GVPFQYTESR ILKARLEFLR ENYRIRENDF LSFDAMRHAA QCLGRVLRGK DDYGVMVLAD RRFQKKRNQL PKWINQAMLE SETNLSTDMA AATAKNFLRT MAQPFKARDQ EGISTWSLAD IERHREKQKL EEERALREVP PNLAYGAAAA APHNGVRNGA GGADEFEDEI DNEDLMMLDA Q // ID G4M132_SCHMA Unreviewed; 698 AA. AC G4M132; DT 14-DEC-2011, integrated into UniProtKB/TrEMBL. DT 14-DEC-2011, sequence version 1. DT 11-MAY-2016, entry version 28. DE SubName: Full=DNA repair helicase rad3/xp-d, putative {ECO:0000313|EMBL:CCD60850.1}; DE Flags: Fragment; GN ORFNames=Smp_199100 {ECO:0000313|EMBL:CCD60850.1}; OS Schistosoma mansoni (Blood fluke). OC Eukaryota; Metazoa; Platyhelminthes; Trematoda; Digenea; Strigeidida; OC Schistosomatoidea; Schistosomatidae; Schistosoma. OX NCBI_TaxID=6183 {ECO:0000313|Proteomes:UP000008854}; RN [1] {ECO:0000313|Proteomes:UP000008854} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Puerto Rican {ECO:0000313|Proteomes:UP000008854}; RX PubMed=22253936; DOI=10.1371/journal.pntd.0001455; RA Protasio A.V., Tsai I.J., Babbage A., Nichol S., Hunt M., Aslett M.A., RA De Silva N., Velarde G.S., Anderson T.J., Clark R.C., Davidson C., RA Dillon G.P., Holroyd N.E., LoVerde P.T., Lloyd C., McQuillan J., RA Oliveira G., Otto T.D., Parker-Manuel S.J., Quail M.A., Wilson R.A., RA Zerlotini A., Dunne D.W., Berriman M.; RT "A systematically improved high quality genome and transcriptome of RT the human blood fluke Schistosoma mansoni."; RL PLoS Negl. Trop. Dis. 6:E1455-E1455(2012). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:CCD60850.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CABG01000094; CCD60850.1; -; Genomic_DNA. DR EnsemblMetazoa; Smp_199100.1; Smp_199100.1:pep; Smp_199100. DR GeneDB; Smp_199100.1:pep; -. DR InParanoid; G4M132; -. DR Proteomes; UP000008854; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CCD60850.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000008854}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:CCD60850.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CCD60850.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CCD60850.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000008854}. FT DOMAIN 1 260 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 248 275 {ECO:0000256|SAM:Coils}. FT NON_TER 698 698 {ECO:0000313|EMBL:CCD60850.1}. SQ SEQUENCE 698 AA; 79656 MW; 146722B6FA0F9E72 CRC64; MIELKRTIDA KGHGVLEMPS GTGKTVSLLS LIVAYMKARP GIVEKFIYCS RTVPELEKVI EELKVLDKYY ATETNEKGCG LLGIVLSSRK NLCIQRDVKQ AGDGAAVDSA CFRLTASFVR KKHMTDPNVP YCKYYEEFDL HGRDNPLPTG IYNMADIKTY AKKHNYCPYF LTRYAISYAN IVVYSYFYLL DPKIANVVSR ELPKNSVVVF DEAHNIDNVC IESMSCLITR RSLEKCTTSL NLLTQTVNEA KTNNSERLKE EYQRLVEGLR QAKLSKETDL VLANPALPDD ILQESIPGSL RSADSFLSFL RRFLEYVKLR LRIAHVVHET PVAFLRDCLE KVCVDRKPLQ FCAERLRSLL HTLELADYAN FSSLTLLCNF ATLVSTYTRG FCLIIEPFDE RKPTIINPVL YFHCMDASLP IRPIMSRFTS VIITSGTLSP LEMYPRILDF HPVNTVSFTM TLARNCVLPM IVSKGNDQVP MTTKFESRQD VAVIRNYGHL LAQLSAVVPD GIVAFFPSYH YLESTFASWY EQHIVEQIQR NKLLFVETQD AEETSLALAA YHRARLDFLR EQYNVRPNEF ITFDAMRHAA QCLGRAIRGK SDYGIMILAD KRYARADKRF KLPGWIQSQL QDAFINLSIE ESIQASRRFL RLMGQPFNKN DQLGLALLTR EHINKLIEQN QKDSIISMGK MNSCQVAN // ID G4NAV5_MAGO7 Unreviewed; 795 AA. AC G4NAV5; DT 14-DEC-2011, integrated into UniProtKB/TrEMBL. DT 14-DEC-2011, sequence version 1. DT 11-MAY-2016, entry version 27. DE SubName: Full=DNA repair helicase rad15 {ECO:0000313|EMBL:EHA50547.1}; GN ORFNames=MGG_03132 {ECO:0000313|EMBL:EHA50547.1}; OS Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) (Rice OS blast fungus) (Pyricularia oryzae). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; OC Sordariomycetes; Sordariomycetidae; Magnaporthales; Magnaporthaceae; OC Magnaporthe. OX NCBI_TaxID=242507 {ECO:0000313|EMBL:EHA50547.1, ECO:0000313|Proteomes:UP000009058}; RN [1] {ECO:0000313|EMBL:EHA50547.1, ECO:0000313|Proteomes:UP000009058} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=70-15 / ATCC MYA-4617 / FGSC 8958 RC {ECO:0000313|Proteomes:UP000009058}; RX PubMed=15846337; DOI=10.1038/nature03449; RA Dean R.A., Talbot N.J., Ebbole D.J., Farman M.L., Mitchell T.K., RA Orbach M.J., Thon M.R., Kulkarni R., Xu J.-R., Pan H., Read N.D., RA Lee Y.-H., Carbone I., Brown D., Oh Y.Y., Donofrio N., Jeong J.S., RA Soanes D.M., Djonovic S., Kolomiets E., Rehmeyer C., Li W., RA Harding M., Kim S., Lebrun M.-H., Bohnert H., Coughlan S., Butler J., RA Calvo S.E., Ma L.-J., Nicol R., Purcell S., Nusbaum C., Galagan J.E., RA Birren B.W.; RT "The genome sequence of the rice blast fungus Magnaporthe grisea."; RL Nature 434:980-986(2005). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=70-15; RG The Broad Institute Genome Sequencing Platform; RA Ma L.-J., Dead R., Young S.K., Zeng Q., Gargeya S., Fitzgerald M., RA Haas B., Abouelleil A., Alvarado L., Arachchi H.M., Berlin A., RA Brown A., Chapman S.B., Chen Z., Dunbar C., Freedman E., Gearin G., RA Gellesch M., Goldberg J., Griggs A., Gujja S., Heiman D., Howarth C., RA Larson L., Lui A., MacDonald P.J.P., Mehta T., Montmayeur A., RA Murphy C., Neiman D., Pearson M., Priest M., Roberts A., Saif S., RA Shea T., Shenoy N., Sisk P., Stolte C., Sykes S., Yandava C., RA Wortman J., Nusbaum C., Birren B.; RT "The Genome Sequence of Magnaporthe oryzae 70-15."; RL Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CM001234; EHA50547.1; -; Genomic_DNA. DR RefSeq; XP_003716866.1; XM_003716818.1. DR EnsemblFungi; MGG_03132T0; MGG_03132T0; MGG_03132. DR GeneID; 2676710; -. DR KEGG; mgr:MGG_03132; -. DR InParanoid; G4NAV5; -. DR KO; K10844; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000009058; Chromosome 4. DR GO; GO:0000439; C:core TFIIH complex; IEA:EnsemblFungi. DR GO; GO:0005829; C:cytosol; IEA:EnsemblFungi. DR GO; GO:0005675; C:holo TFIIH complex; IEA:EnsemblFungi. DR GO; GO:0000112; C:nucleotide-excision repair factor 3 complex; IEA:EnsemblFungi. DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:EnsemblFungi. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0043141; F:ATP-dependent 5'-3' DNA helicase activity; IEA:EnsemblFungi. DR GO; GO:0003684; F:damaged DNA binding; IEA:EnsemblFungi. DR GO; GO:0000717; P:nucleotide-excision repair, DNA duplex unwinding; IEA:EnsemblFungi. DR GO; GO:0033683; P:nucleotide-excision repair, DNA incision; IEA:EnsemblFungi. DR GO; GO:0070816; P:phosphorylation of RNA polymerase II C-terminal domain; IEA:EnsemblFungi. DR GO; GO:0045951; P:positive regulation of mitotic recombination; IEA:EnsemblFungi. DR GO; GO:0010525; P:regulation of transposition, RNA-mediated; IEA:EnsemblFungi. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:EnsemblFungi. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EHA50547.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000009058}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EHA50547.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EHA50547.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EHA50547.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000009058}. FT DOMAIN 7 284 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 255 300 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 795 AA; 91067 MW; 28329AF84F313B29 CRC64; MLFYIDDLPV IFPYPRIYPE QYAYMCDLKK TLDVGGNCVL EMPSGTGKTA TLLSLIVAYQ QHYPEHRKLI YCSRTMSEIE KALAELKNLM KYRAGELGKE EDFRGLGLTS RKNLCLHPSV KREKSGAIVD ARCRGLTAGF VKEKKEKGED VELCVYHDNL DLLEPHNLIP NGVWTLEGLL RYGEEHKQCP YFTSRRMMQY CNVIIYSYHY LLDPKIAERV SKELSRDSII VFDEAHNIDN VCIESLSTDI TEDSLRKASR GAMNLEKRIN EMRETDQNQL EDEYRKLVEG LREADEARQE DAFMSNPVLP DDLLKEAVPG NIRRAEHFVA FLKRFIEYLK TRMKVLEVIS ETPPSFLAHL KEYTFIEKKP LRFCAERLTS LVRTLELTNI EDFQPLQEVA TFATLVATYD KGFLLLLEPY ESEKSQIPNP VLHFTCLDAA IAIKPVFERF KTVIITSGTL SPLEMYPKML GFDAVVQESY AMTLARRSFL PMIVTKGSDQ ASISSSFAVR NDPAVVRNYG QLLTEFAKIT PDGMVVFFPS YFYMESIISM WQGMKILDEI WKYKLILVET PDAQETAVAL ETYRTACCNG TGAIMLCVAR GKVSEGIDFD HQYGRTVLCI GVPFQYTESL ILKARLEFLR ETYRIRENDF LSFDAMRHAA QCLGRVLRGK DDYGIMVLAD RRFPKKRPQL PKWINQALAE SDVNMSTDMA VSAARKFLKS MAQPFRPEDQ DGVSRWTIED LKKHQAKVEN DMIRELQAAQ GKATNGQAVT VRVIEEDEDY EMDDAAEKDM MQLDA // ID G4U3C1_PIRID Unreviewed; 798 AA. AC G4U3C1; DT 14-DEC-2011, integrated into UniProtKB/TrEMBL. DT 14-DEC-2011, sequence version 1. DT 11-MAY-2016, entry version 30. DE SubName: Full=Probable RAD3-DNA helicase/ATPase {ECO:0000313|EMBL:CCA78059.1}; GN ORFNames=PIIN_11763 {ECO:0000313|EMBL:CCA78059.1}; OS Piriformospora indica (strain DSM 11827). OC Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; OC Agaricomycetes; Sebacinales; Sebacinales group B; Piriformospora. OX NCBI_TaxID=1109443 {ECO:0000313|EMBL:CCA78059.1, ECO:0000313|Proteomes:UP000007148}; RN [1] {ECO:0000313|EMBL:CCA78059.1, ECO:0000313|Proteomes:UP000007148} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=DSM 11827 {ECO:0000313|EMBL:CCA78059.1, RC ECO:0000313|Proteomes:UP000007148}; RX PubMed=22022265; DOI=10.1371/journal.ppat.1002290; RA Zuccaro A., Lahrmann U., Guldener U., Langen G., Pfiffi S., RA Biedenkopf D., Wong P., Samans B., Grimm C., Basiewicz M., Murat C., RA Martin F., Kogel K.H.; RT "Endophytic Life Strategies Decoded by Genome and Transcriptome RT Analyses of the Mutualistic Root Symbiont Piriformospora indica."; RL PLoS Pathog. 7:e1002290-e1002290(2011). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:CCA78059.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CAFZ01001883; CCA78059.1; -; Genomic_DNA. DR EnsemblFungi; CCA78059; CCA78059; PIIN_11763. DR InParanoid; G4U3C1; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000007148; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CCA78059.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000007148}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:CCA78059.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CCA78059.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CCA78059.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000007148}. FT DOMAIN 7 291 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 798 AA; 90597 MW; CBBFAEB75C096480 CRC64; MKFEIDNLPV VFPYDKIYPE QYKYMCDLKR TLDASGHCVL EMPSGTGKTV SLLSLIVSYQ QFFPTKRKLI YCSRTVPEIE KALTELKRLM KYRIESAETD EQREKERAFT GLGLTSRRNL CLHPQVSTEK KGHVVDAKCR DLTSAAACEK GRANPGSVPL CDWHEGLNDM EPGSLVPPGI LTLADLMERG RRTTTCPYFT IRRMMPFVDV IIYSFHYLLD PKVAEQVSKD LSKDAIVVFD EAHNIDNVCI ESLSIDLTRP MLDSAVRSVT KLGEKVEEIK LTDASKLQDE YAKLVQGLQD ADADDNEDPI VSNPVLPEDL LKEAIPGNIR KAEHFVAFLK RFVEYLKTRM RVLHVVAETP ASFLQHLKDI TYIEKRPLRF CAERLQSLIR TLELTGLDEY YSLQKVASFA TLVATYEKGF LLILEPFETD NATVPNPIFH LICLDPSFAI KPIFERFSSV VITSGTISPL DMYPKMLQFT PVVQETYPMT LTRNCFLPLV ITRGSDQVAI SSQFEVRNDP AVVRNFGSIL IEYSKIVPDG VVAFFPSYLY MESIVAAWND MGILEDVWKH KLIFVETPDA NETSIALENY RRACNNGRGA VLLSVARGKV SEGIDFDHNY GRAVIMVPYQ YTESRILRAR LEYLRDTYRI RESEFLGFDA MRNAAQCVGR VLRGKTDWGL MVFADRRFAR SDKRSKLPKW INQYITENAS NLSTDMAIVL SKSFMRTISQ NTNENLQTGV SLWTLEDVLK EQIRAKQLEA AGHEPPSVAR MEIDDQEGYD YGDGGIPDHV IAEADLEI // ID G4UT10_NEUT9 Unreviewed; 806 AA. AC G4UT10; DT 14-DEC-2011, integrated into UniProtKB/TrEMBL. DT 14-DEC-2011, sequence version 1. DT 11-MAY-2016, entry version 27. DE SubName: Full=Putative excision repair protein rhp3 {ECO:0000313|EMBL:EGZ70709.1}; GN ORFNames=NEUTE2DRAFT_159052 {ECO:0000313|EMBL:EGZ70709.1}; OS Neurospora tetrasperma (strain FGSC 2509 / P0656). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; OC Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; OC Neurospora. OX NCBI_TaxID=510952 {ECO:0000313|EMBL:EGZ70709.1, ECO:0000313|Proteomes:UP000008513}; RN [1] {ECO:0000313|EMBL:EGZ70709.1, ECO:0000313|Proteomes:UP000008513} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=strain FGSC 2509 / P0656 {ECO:0000313|Proteomes:UP000008513}; RX PubMed=21750257; DOI=10.1534/genetics.111.130690; RA Ellison C.E., Stajich J.E., Jacobson D.J., Natvig D.O., Lapidus A., RA Foster B., Aerts A., Riley R., Lindquist E.A., Grigoriev I.V., RA Taylor J.W.; RT "Massive changes in genome architecture accompany the transition to RT self-fertility in the filamentous fungus Neurospora tetrasperma."; RL Genetics 189:55-69(2011). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GL891247; EGZ70709.1; -; Genomic_DNA. DR EnsemblFungi; EGZ70709; EGZ70709; NEUTE2DRAFT_159052. DR OMA; DEVWKYK; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000008513; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000008513}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000008513}. FT DOMAIN 7 282 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 753 788 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 806 AA; 92981 MW; E1643E70FC56362C CRC64; MEFNIDDLPV LFPYPRIYPE QYAYMVDLKK TLDAGGNCVL EMPSGTGKTV TLLSLIVAYQ QYYPEHRKLI YCSRTMSEIE KALVELRALM KFRAERLGHE EEFRGLGLTS RKNLCLHPSV KREKSGAIVD ARCRSLTAGF VKEKREKGEN VETCVYHDNL DLLEPHNLIP NGIWTLDGLM RYGEEKKQCP YFTARRMMQY CNVIIYSYHY LLDPKIAERV SKDLSKDCIV VFDEAHNIDN VCIESLSTDI TQDSLMRATR GAQNLEAKIS EMKDSDQEKL QSEYEKLVEG LKGLDEGRQE DAFMANPTLP DDLLKEAVPG NIRRAEHFVA FLRRFIEYLK TRMKVRQVIS ETPPSFLAHL KEYTFIEKKP LRFCAERLTS LVRTLELTNI EDYRPLQEVA TFATLVATYE KGFLLILEPY ESDTAKTPNP VLHFTCLDAA IAIKPVFDRF SSVIITSGTI SPLEMYPKML NFETVVQESY AMTLARRSFL PMIVTRGSDQ ASISTSFQVR NEPSVVRNYG NLLTEFARIT PDGMVVFFPS YLYMESIISM WQGMGILDEV WKHKLILVET PDAQETSLAL ETYRTACCNG RGAILLCVAR GKVSEGIDFD HQYGRTVLCI GVPFQYTESR ILKARLEFLR ETYRIRENDF LSFDAMRHAA QCLGRVLRGK DDYGVMVLAD RRFMKKRAQL PKWINQAFLE ANTNLSTDMA VGNARAFLKQ MAQPFSAKDQ EGVSIWGMED LKRHQEKMAE DMIVELKTAR EVEERERKRR EEEERRRFEE ERDRVSDYEM DEDDEAEMMA LDARIG // ID G4ZIZ2_PHYSP Unreviewed; 791 AA. AC G4ZIZ2; DT 14-DEC-2011, integrated into UniProtKB/TrEMBL. DT 14-DEC-2011, sequence version 1. DT 11-MAY-2016, entry version 26. DE SubName: Full=Putative uncharacterized protein {ECO:0000313|EMBL:EGZ18797.1}; GN ORFNames=PHYSODRAFT_354695 {ECO:0000313|EMBL:EGZ18797.1}; OS Phytophthora sojae (strain P6497) (Soybean stem and root rot agent) OS (Phytophthora megasperma f. sp. glycines). OC Eukaryota; Stramenopiles; Oomycetes; Peronosporales; Phytophthora. OX NCBI_TaxID=1094619 {ECO:0000313|Proteomes:UP000002640}; RN [1] {ECO:0000313|EMBL:EGZ18797.1, ECO:0000313|Proteomes:UP000002640} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=P6497 {ECO:0000313|EMBL:EGZ18797.1, RC ECO:0000313|Proteomes:UP000002640}; RX PubMed=16946064; DOI=10.1126/science.1128796; RA Tyler B.M., Tripathy S., Zhang X., Dehal P., Jiang R.H.Y., Aerts A., RA Arredondo F.D., Baxter L., Bensasson D., Beynon J.L., Chapman J., RA Damasceno C.M.B., Dorrance A.E., Dou D., Dickerman A.W., Dubchak I.L., RA Garbelotto M., Gijzen M., Gordon S.G., Govers F., Grunwald N.J., RA Huang W., Ivors K.L., Jones R.W., Kamoun S., Krampis K., Lamour K.H., RA Lee M.-K., McDonald W.H., Medina M., Meijer H.J.G., Nordberg E.K., RA Maclean D.J., Ospina-Giraldo M.D., Morris P.F., Phuntumart V., RA Putnam N.H., Rash S., Rose J.K.C., Sakihama Y., Salamov A.A., RA Savidor A., Scheuring C.F., Smith B.M., Sobral B.W.S., Terry A., RA Torto-Alalibo T.A., Win J., Xu Z., Zhang H., Grigoriev I.V., RA Rokhsar D.S., Boore J.L.; RT "Phytophthora genome sequences uncover evolutionary origins and RT mechanisms of pathogenesis."; RL Science 313:1261-1266(2006). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; JH159154; EGZ18797.1; -; Genomic_DNA. DR RefSeq; XP_009527855.1; XM_009529560.1. DR GeneID; 20649671; -. DR KEGG; psoj:PHYSODRAFT_354695; -. DR InParanoid; G4ZIZ2; -. DR KO; K10844; -. DR Proteomes; UP000002640; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR006935; Helicase/UvrB_N. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR Pfam; PF04851; ResIII; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000002640}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000002640}. FT DOMAIN 7 301 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 791 AA; 89430 MW; 40270B2EC084282A CRC64; MKVDIDGLEV LFPYERMYSE QLQYMRELKR ALDAQGHCML EMPTGTGKTV SLLALVLAYK HAHPTAGKLV YCTRTVPEMA KCVEEIKKLA QYRTAHYGAD KAQLTAVCLS SRRNMCVHPR VMAHADGEDV DGQCRKMTAS WVRARAAKAR EAAASGDVPM DGGEQVREVE TCSFYENYDA RKSDDTVLPP GIYSVDDLKE IGAKKGWCPY FLTRYVVTFA DVVVYNYQYM LDPKVSQLVS RSFEKESIVV FDEAHNIDNV CIEALSVDLD RRSLDRASRN LTTLSSQVNK LKQADKARLD AEYRRLVDGL RSSNAVVAPS YSDPATNRNI DTSNDIMIAN PVLPDDVLDE AIPGNIRRAE HFVAFMRRLI EYLRQRIRVR QVESETPQAF LHHLHQAINM EIKPMKFCYT RLNSLLRTLE VTNLEEYNAL TDVADFATLV ATYAEGFMLI IEPFDSASGV HDPVLQLSCL DASLAIRPVF ERFSSVIITS GTLSPIDLYP RLLNFNPVIR ESLPMSVYRS SICPLVITRG SDQMPVSTKF DLRDDMSVVR NYGTLLLEMA SCTPDGMVCF FPSYLYMEKI IGQWDSLGVL KRVLSSKLLF IETKDIVETT LALDNYKKAC DCGRGAIFFS VARGKVAEGI DFDRHYGRAV ILFGIPFQYT LSNTLRARLE YLRYTHQIRE GDFLTFDALR QAAQCAGRVL RSKTDYGLVI FADSRYNRAD KRTKLPPWIT QFLVDSHLNL SVDMAVFMAK KYLSLMAQPV DESTNVNSIL LDAEGVAKWL GKHPKEDEPM Q // ID G5BKU3_HETGA Unreviewed; 759 AA. AC G5BKU3; DT 14-DEC-2011, integrated into UniProtKB/TrEMBL. DT 14-DEC-2011, sequence version 1. DT 11-MAY-2016, entry version 23. DE SubName: Full=TFIIH basal transcription factor complex helicase subunit {ECO:0000313|EMBL:EHB09904.1}; DE Flags: Fragment; GN ORFNames=GW7_13339 {ECO:0000313|EMBL:EHB09904.1}; OS Heterocephalus glaber (Naked mole rat). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; OC Hystricognathi; Bathyergidae; Heterocephalus. OX NCBI_TaxID=10181 {ECO:0000313|EMBL:EHB09904.1, ECO:0000313|Proteomes:UP000006813}; RN [1] {ECO:0000313|EMBL:EHB09904.1, ECO:0000313|Proteomes:UP000006813} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RX PubMed=21993625; DOI=10.1038/nature10533; RA Kim E.B., Fang X., Fushan A.A., Huang Z., Lobanov A.V., Han L., RA Marino S.M., Sun X., Turanov A.A., Yang P., Yim S.H., Zhao X., RA Kasaikina M.V., Stoletzki N., Peng C., Polak P., Xiong Z., Kiezun A., RA Zhu Y., Chen Y., Kryukov G.V., Zhang Q., Peshkin L., Yang L., RA Bronson R.T., Buffenstein R., Wang B., Han C., Li Q., Chen L., RA Zhao W., Sunyaev S.R., Park T.J., Zhang G., Wang J., Gladyshev V.N.; RT "Genome sequencing reveals insights into physiology and longevity of RT the naked mole rat."; RL Nature 479:223-227(2011). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; JH170785; EHB09904.1; -; Genomic_DNA. DR InParanoid; G5BKU3; -. DR Proteomes; UP000006813; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EHB09904.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000006813}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EHB09904.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EHB09904.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EHB09904.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000006813}. FT DOMAIN 6 282 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 76 99 {ECO:0000256|SAM:Coils}. FT COILED 248 275 {ECO:0000256|SAM:Coils}. FT NON_TER 759 759 {ECO:0000313|EMBL:EHB09904.1}. SQ SEQUENCE 759 AA; 86841 MW; 5C398C9D23E6B6A7 CRC64; RLNVDGLLVY FPYDYIYPEQ FSYMLELKRT LDAKGHGVLE MPSGTGKTVS LLALIMAYQW AYPLEVTKLI YCSRTVPEIE KVIEELRKLL NFYEKQEGEK LPFLGLALSS RKNLCIHPEV TPLRFGKDVD GKCHSLTASY VRAQYQQDAS MPHCRFYEEF DAHGRQVPLP TGIYNLDDLK ALGQRQGWCP YFLARYSILH ANEGVYTYHY LLDPKIADLV SKELARKAVV VFDEAHNIDN VCIDSMSVNL TRRTLDRCQA NLDTLQKTVL RIKETDEQRL RDEYRRLVEG LREASAARET DAHLANPVLP DEVLQEAVPG SIRTAEHFLG FLRRLLEFIK WRLRVQHVVQ ESPPAFLSSL AQRVCIQRKP LRFCAERLRS LLHTLEIADL ADFSPLTLLA NFATLVSTYA KGFTIIIEPF DDRTPTIANP ILHFSCMDAS LAIKPVFERF QSVIITSGTL SPLDIYPKIL DFHPVTMATF TMTLARVCLC PMIIGRGNDQ VAISSKFETR EDIAVIRNYG NLLLEMSAVV PDGIVAFFTS YQYMESTVAS WYEQGILENI QRNKLLFIET QDGAETSVAL EKYQEACENG RGPILLSVAR GKVSEGIDFV HHYGRAVIMF GVPYVYTQSR ILKARLEYLR DQFQIRENDF LTFDAMRHAA QCVGRAIRGK TDYGLMVFAD KRFARADKRG KLPRWIQEHL TDANLNLTVD EGVQVAKYFL RQMAQPFHRE DQLGLSLLSL EQLESEETLR RIEQIAQQL // ID G6CU92_DANPL Unreviewed; 736 AA. AC G6CU92; DT 25-JAN-2012, integrated into UniProtKB/TrEMBL. DT 25-JAN-2012, sequence version 1. DT 11-MAY-2016, entry version 27. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EHJ75192.1}; GN ORFNames=KGM_19783 {ECO:0000313|EMBL:EHJ75192.1}; OS Danaus plexippus (Monarch butterfly). OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; OC Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; OC Papilionoidea; Nymphalidae; Danainae; Danaini; Danaina; Danaus; OC Danaus. OX NCBI_TaxID=13037 {ECO:0000313|EMBL:EHJ75192.1, ECO:0000313|Proteomes:UP000007151}; RN [1] {ECO:0000313|EMBL:EHJ75192.1, ECO:0000313|Proteomes:UP000007151} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=F-2 {ECO:0000313|EMBL:EHJ75192.1}; RX PubMed=22118469; DOI=10.1016/j.cell.2011.09.052; RA Zhan S., Merlin C., Boore J.L., Reppert S.M.; RT "The monarch butterfly genome yields insights into long-distance RT migration."; RL Cell 147:1171-1185(2011). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:EHJ75192.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AGBW01003318; EHJ75192.1; -; Genomic_DNA. DR STRING; 13037.EHJ75192; -. DR EnsemblMetazoa; EHJ75192; EHJ75192; KGM_19783. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; G6CU92; -. DR OMA; DEVWKYK; -. DR Proteomes; UP000007151; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000007151}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000007151}. FT DOMAIN 1 259 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 736 AA; 83716 MW; DEEF7C6BDE779669 CRC64; MLELKRALDA KGHGLLEMPS GTGKTISLLS LIVAYMIQNP HHVRKLIYCS RTVPEIEKVL EELKNLIKYY EKSQGEKPSL TGVVLSSRKN LCIHPEVSRE REGKLVDGKC HSLTASYIRD RHEQDPSVPI CQFYEGFNRE GRESMLPYGV YTMDDLKQYG ADRNWCPYFL SRFAIIHAEI VVYSYHYLLD PKIAEVVSKE LNKEAVVVFD EAHNIDNVCI DSLSVKITRR TIDKSTQALQ TLEKAVSQLK QEDEARLALE YEQMVEGLRE AAQLRDSDVI LGNPVLPDEL LNEVVPGNIR NAVHFLGFLK RFIEYLKTRL RIQHVVQESP AGFLKDVSSR VCIERKPLRF VSSRLQTLMK TLQIPDPSNF GSLTLVAHLA TLVSTYTKGF VIIIEPFDDK TPTVSNPILH FSCMDSSIAM RPVFGRFQTV IITSGTLSPL DMYPKILDFN PVVMSSFTMT LARPCILPMI VSKGSDQVAI SSKYETREDV AVIRNYGQLL VEISACVPDG VVCFFTSYLY LESVVGAWYD QGVVANLQKH KLLFIETQDS AETSFALINY IKACESGRGA VLLSVARGKV SEGVDFDHHL GRAVLMFGIP YVFTQSRILK ARLEYLRDQF QIRENDFLTF DAMRHAAQCV GRALRGKTDY GIMIFADKRF SRSDKRSKLP RWIQEHLRDS LCNLSTEEAV QISKRWLRQM SQPFSREDQL GVSLLTLQQL QSKEQQEKIE KQVLQK // ID G7E1R2_MIXOS Unreviewed; 797 AA. AC G7E1R2; DT 25-JAN-2012, integrated into UniProtKB/TrEMBL. DT 25-JAN-2012, sequence version 1. DT 11-MAY-2016, entry version 28. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:GAA96772.1}; GN Name=Mo03443 {ECO:0000313|EMBL:GAA96772.1}; GN ORFNames=E5Q_03443 {ECO:0000313|EMBL:GAA96772.1}, GN L969DRAFT_97120 {ECO:0000313|EMBL:KEI36722.1}; OS Mixia osmundae (strain CBS 9802 / IAM 14324 / JCM 22182 / KY 12970). OC Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; OC Mixiomycetes; Mixiales; Mixiaceae; Mixia. OX NCBI_TaxID=764103 {ECO:0000313|EMBL:GAA96772.1, ECO:0000313|Proteomes:UP000009131}; RN [1] {ECO:0000313|Proteomes:UP000009131} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=CBS 9802 / IAM 14324 / JCM 22182 / KY 12970 RC {ECO:0000313|Proteomes:UP000009131}; RX PubMed=21478649; DOI=10.2323/jgam.57.63; RA Nishida H., Nagatsuka Y., Sugiyama J.; RT "Draft genome sequencing of the enigmatic basidiomycete Mixia RT osmundae."; RL J. Gen. Appl. Microbiol. 57:63-67(2011). RN [2] {ECO:0000313|EMBL:GAA96772.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=IAM 14324 {ECO:0000313|EMBL:GAA96772.1}; RX PubMed=22724063; DOI=10.1098/rsob.120043; RA Nishida H., Kondo S., Matsumoto T., Suzuki Y., Yoshikawa H., RA Taylor T.D., Sugiyama J.; RT "Characteristics of nucleosomes and linker DNA regions on the genome RT of the basidiomycete Mixia osmundae revealed by mono- and dinucleosome RT mapping."; RL Open Biol. 2:120043-120043(2012). RN [3] {ECO:0000313|EMBL:KEI36722.1, ECO:0000313|Proteomes:UP000027399} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=CBS 9802 / IAM 14324 / JCM 22182 / KY 12970 RC {ECO:0000313|Proteomes:UP000027399}, and RC IAM 14324 {ECO:0000313|EMBL:KEI36722.1}; RX PubMed=24372469; DOI=10.1111/nph.12653; RA Toome M., Ohm R.A., Riley R.W., James T.Y., Lazarus K.L., RA Henrissat B., Albu S., Boyd A., Chow J., Clum A., Heller G., RA Lipzen A., Nolan M., Sandor L., Zvenigorodsky N., Grigoriev I.V., RA Spatafora J.W., Aime M.C.; RT "Genome sequencing provides insight into the reproductive biology, RT nutritional mode and ploidy of the fern pathogen Mixia osmundae."; RL New Phytol. 202:554-564(2014). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; BABT02000106; GAA96772.1; -; Genomic_DNA. DR EMBL; KL411554; KEI36722.1; -; Genomic_DNA. DR RefSeq; XP_014565284.1; XM_014709798.1. DR EnsemblFungi; GAA96772; GAA96772; E5Q_03443. DR EnsemblFungi; KEI36722; KEI36722; L969DRAFT_97120. DR GeneID; 26269439; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000009131; Unassembled WGS sequence. DR Proteomes; UP000027399; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 3. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000009131}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000009131}. FT DOMAIN 7 285 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 797 AA; 89874 MW; 4D38A93F8DB6D408 CRC64; MKFFIDQLPV IFPYDRIYPE QYAYVCDLKR TLDAGGNCVL EMPSGTGKTV SLLSLIVAYQ QHYPERRKLV YCSRTVPEIE KALAELKRLM EYRRAAGCND DGFMALGLSS RKNLCIHPTI SREKKGKVAD AKCRDLTSAW VCEKGRADPG SVELCEFHEN LGQLEPGTQL PPAVYTLEDV KAYGEQQGIC PYFAVRRMLV HASVVIYSFH YLLDPKVAEQ VSKEMSKDAI VVFDEAHNID NVCIESLSID LTRPMLDSAA RSVTALTDKI KEIRQTDATK LQDEYARLVE GLQGAEADQD ENAFMGNPVL PDDILNEAVP GNIRRAEHFV AFLARFVEYL KTRMRVLHVV AEKPASFLQH LKDITFIEKK PLRFCAERLT SLVRTLELTR IDEFSALSKV ASFATLVATY DKGFLLILEP FETENATVPN PIFHLCCLDA SLAIKPVFDR FSSVVITSGT ISPLEMYPKM LQFTATVQES YAMTLTRNCF LPLVITRGSD QVNISSRFEV RNDPAVVRNF GTILIEYAKA VPDGMVCFFP SYLYMESIVA AWHDMGILNE AWKHKLIFVE TPDAAETSVA LENYRRACDN GRGAVLLSVA RGKVSEGIDF DHHYGRCVIM FGIPYQYTES RILKARLEFL RDEHRIREND YLTFDAMRHA AQCVGRVLRG KTDYGLMVFA DRRFAKADKR AKLPKWINHY ITDTASNLST DMALVMSKNF LRQMAQPFEQ DTQHISLWDL SDVKARQQAR QDEAAVQAAE AEDAPMANGD VFEDEFGMIE DTYLDDLDAA AGITAAG // ID G7MAQ7_9CLOT Unreviewed; 761 AA. AC G7MAQ7; DT 25-JAN-2012, integrated into UniProtKB/TrEMBL. DT 25-JAN-2012, sequence version 1. DT 11-MAY-2016, entry version 15. DE SubName: Full=DEAD_2 domain protein {ECO:0000313|EMBL:EHJ02316.1}; GN ORFNames=CDLVIII_5851 {ECO:0000313|EMBL:EHJ02316.1}; OS Clostridium sp. DL-VIII. OC Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; OC Clostridium. OX NCBI_TaxID=641107 {ECO:0000313|EMBL:EHJ02316.1, ECO:0000313|Proteomes:UP000005106}; RN [1] {ECO:0000313|EMBL:EHJ02316.1, ECO:0000313|Proteomes:UP000005106} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=DL-VIII {ECO:0000313|EMBL:EHJ02316.1}; RX PubMed=23929491; RA Taghavi S., Izquierdo J.A., van der Lelie D.; RT "Complete Genome Sequence of Clostridium sp. Strain DL-VIII, a Novel RT Solventogenic Clostridium Species Isolated from Anaerobic Sludge."; RL Genome Announc. 1:e00605-13(2013). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CM001240; EHJ02316.1; -; Genomic_DNA. DR RefSeq; WP_009172952.1; NZ_CM001240.1. DR EnsemblBacteria; EHJ02316; EHJ02316; CDLVIII_5851. DR Proteomes; UP000005106; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 4. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR001650; Helicase_C. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF00270; DEAD; 1. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. DR PROSITE; PS51194; HELICASE_CTER; 1. PE 4: Predicted; KW Complete proteome {ECO:0000313|Proteomes:UP000005106}; KW Reference proteome {ECO:0000313|Proteomes:UP000005106}. FT DOMAIN 184 440 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT DOMAIN 589 761 Helicase C-terminal. FT {ECO:0000259|PROSITE:PS51194}. SQ SEQUENCE 761 AA; 89216 MW; 6142C0896C5F6C9E CRC64; MDKVIIKESV RNLVEFCLKS GDIDNRFSGS ARAVEGTKAH QKLQDDNLSI YKNYEKEVYL SYVFETKKSL INIEGRADGI IIQDDRIIIE EIKSTYKNFA YIDDLNEVHW AQAKVYALIY CKQNNIQNIY VRLSYVQLET SEVKSFEKQF TIEELEKFIE AILEEYEKFV SLIYQQKNRR NESIRTLSFP FDKYREGQRK LINISYQTMK EKEILFAQAP TGIGKTISTI FPAVKALGEE IGERIIYLTA KTINRQVAEE TFERLRTKGL KFKSIVITAK EKICSNDNFD CNPEKCKYAK NYYGKVKEVI FYILENEERI SREILQEYAE RYEVCPFELS LDLSLYCDGI IGDYNYIFDP RVSLTRVLES KGNIVLVDEA HNLIDRSRNM YSASLCKNEI LKCKKLTKGK LNKLHAILRK INDYFVELRN ECEDKEVTWL CEEGLPSELS KHLQLYLRES EEILVRGNKF EGYEEILQLY FDINAFVSTM QLYDENYRTC MEKEAQELML TLYCINPAKN LKEYLKRCNS VIFFSATLTP LKYYIEMLGG TDETYRIKLP SPFNKENLKV YVSPINIRYS HRQRTLKLVK DKILDFVKDK LGNYMIFSPS YAYMELLYEE IGKSPIEGFE FVKQKKNMSE EEKSEFLNEF KIKNNLLMFC VLGGMFSEGI DLPGEQLIGS VIIGVGYPMI DMKNEVIKEF YRERGYEYAY IFPGINKVQQ AAGRVIRTEN DKGRVLLIDD RYVSNNYKVL LPSEWYPIGK L // ID G7WCM1_DESOD Unreviewed; 785 AA. AC G7WCM1; DT 25-JAN-2012, integrated into UniProtKB/TrEMBL. DT 25-JAN-2012, sequence version 1. DT 11-MAY-2016, entry version 23. DE SubName: Full=DNA helicase, Rad3 {ECO:0000313|EMBL:AET66559.1}; GN OrderedLocusNames=Desor_0879 {ECO:0000313|EMBL:AET66559.1}; OS Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / OS VKM B-1628) (Desulfotomaculum orientis). OC Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; OC Desulfosporosinus. OX NCBI_TaxID=768706 {ECO:0000313|EMBL:AET66559.1, ECO:0000313|Proteomes:UP000006346}; RN [1] {ECO:0000313|Proteomes:UP000006346} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628 RC {ECO:0000313|Proteomes:UP000006346}; RA Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., RA Peters L., Ovchinnikova G., Teshima H., Detter J.C., Han C., Tapia R., RA Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Pester M., RA Spring S., Ollivier B., Rattei T., Klenk H.-P., Wagner M., Loy A., RA Woyke T.; RT "Complete sequence of Desulfosporosinus orientis DSM 765."; RL Submitted (NOV-2011) to the EMBL/GenBank/DDBJ databases. RN [2] {ECO:0000313|EMBL:AET66559.1, ECO:0000313|Proteomes:UP000006346} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628 RC {ECO:0000313|Proteomes:UP000006346}; RX PubMed=23105050; DOI=10.1128/JB.01392-12; RA Pester M., Brambilla E., Alazard D., Rattei T., Weinmaier T., Han J., RA Lucas S., Lapidus A., Cheng J.F., Goodwin L., Pitluck S., Peters L., RA Ovchinnikova G., Teshima H., Detter J.C., Han C.S., Tapia R., RA Land M.L., Hauser L., Kyrpides N.C., Ivanova N.N., Pagani I., RA Huntmann M., Wei C.L., Davenport K.W., Daligault H., Chain P.S., RA Chen A., Mavromatis K., Markowitz V., Szeto E., Mikhailova N., RA Pati A., Wagner M., Woyke T., Ollivier B., Klenk H.P., Spring S., RA Loy A.; RT "Complete genome sequences of Desulfosporosinus orientis DSM765T, RT Desulfosporosinus youngiae DSM17734T, Desulfosporosinus meridiei RT DSM13257T, and Desulfosporosinus acidiphilus DSM22704T."; RL J. Bacteriol. 194:6300-6301(2012). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP003108; AET66559.1; -; Genomic_DNA. DR RefSeq; WP_014183384.1; NC_016584.1. DR STRING; 768706.Desor_0879; -. DR EnsemblBacteria; AET66559; AET66559; Desor_0879. DR KEGG; dor:Desor_0879; -. DR eggNOG; ENOG4107QX6; Bacteria. DR eggNOG; COG1199; LUCA. DR BioCyc; DORI768706:GHQZ-876-MONOMER; -. DR Proteomes; UP000006346; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 4. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000313|EMBL:AET66559.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000006346}; KW Helicase {ECO:0000313|EMBL:AET66559.1}; KW Hydrolase {ECO:0000313|EMBL:AET66559.1}; KW Nucleotide-binding {ECO:0000313|EMBL:AET66559.1}; KW Reference proteome {ECO:0000313|Proteomes:UP000006346}. FT DOMAIN 181 426 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 785 AA; 90075 MW; 6F1C891DA6BAFB31 CRC64; MAATIKTSVR NLVEFVLRRG DLQPVSIGSS RAVEGIKVHQ YIQKSGGDDY LPEVMLSYVY QSGEAALEIK GRADGLILKA DCPCIDEIKT TSLDLNLIDE FFNELHWAQA QCYAFMYARQ EGLELMEVQL TYVQLDTGQV KQFARRSSLA ELEEFFRSLA EDYLNWARQR HAWIALRNES IKALEFPFPS YREGQRELAV AVYQTIKHSQ KLFAQAPTGI GKTLGTLFPA LKALAEGQTL QIFYLTAKTI TRTVAEKTLA DLQDEGLEIK PLTLTAKSKV CFLPEVSCLP EDCPYARGYY DRVRGAIEDI FKEKAWSRPV IEEFARRHYL CPFEFSLEMA NWADVVIGDY NYVFDPRVYL RRFFLEGGDY TFLVDEAHNL VDRARDMFSA ELGKEAWLEL KRLTKEDDLT LSKSLAKVNS ALVQEKKIHN EISVNGESVD KALPAKLLQA LKAFIKAAES FLKTNEQSFP WQDRLLDQYF LALNFVRTGE SYNERYVTYK QLTKEDFRIK LFCLDPSERL KEALDRGRAA VLFSATLSPM DYFMQVLGGE KTSYKLKLVS PFPPENLCLL INDGISTKYK YRETTYDQVA EAISAALRYK TGNYLVYFPS YQYLQEVFLR FKEHNQDIEC LCQSTGMGEE EKEEFLLKFS HNPRQTLAGF VLMGGIFGEG INLIGDRLCG VIVVGVGLPQ ICQEREIIRS YYEKSSHQGF EFAYMYPGMN KVLQAVGRVI RTEKDRGIAL LIDERFSKVS YKKLFPEEWK KIHYCRTVDG ILTALKDFKP SHHHL // ID G7XKF8_ASPKW Unreviewed; 801 AA. AC G7XKF8; DT 25-JAN-2012, integrated into UniProtKB/TrEMBL. DT 25-JAN-2012, sequence version 1. DT 11-MAY-2016, entry version 27. DE SubName: Full=DNA repair helicase RAD3 {ECO:0000313|EMBL:GAA87456.1}; GN ORFNames=AKAW_05570 {ECO:0000313|EMBL:GAA87456.1}; OS Aspergillus kawachii (strain NBRC 4308) (White koji mold) (Aspergillus OS awamori var. kawachi). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; OC Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus. OX NCBI_TaxID=1033177 {ECO:0000313|EMBL:GAA87456.1, ECO:0000313|Proteomes:UP000006812}; RN [1] {ECO:0000313|EMBL:GAA87456.1, ECO:0000313|Proteomes:UP000006812} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=NBRC 4308 {ECO:0000313|Proteomes:UP000006812}; RX PubMed=22045919; DOI=10.1128/EC.05224-11; RA Futagami T., Mori K., Yamashita A., Wada S., Kajiwara Y., RA Takashita H., Omori T., Takegawa K., Tashiro K., Kuhara S., Goto M.; RT "Genome sequence of the white koji mold Aspergillus kawachii IFO 4308, RT used for brewing the Japanese distilled spirit shochu."; RL Eukaryot. Cell 10:1586-1587(2011). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; DF126459; GAA87456.1; -; Genomic_DNA. DR InParanoid; G7XKF8; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000006812; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:GAA87456.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000006812}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:GAA87456.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:GAA87456.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:GAA87456.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000006812}. FT DOMAIN 7 283 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 248 275 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 801 AA; 91385 MW; DF3D8C167476D61B CRC64; MKFFIDDLPV LFPYPRIYPE QYAYMCDLKK TLDAGGHCVL EMPSGTGKTV SLLSLIVAYQ QHYPEHRKLI YCSRTMSEIE KALAELKALM KFRAKELGHT EDFRALGLTS RKNLCLHPSV KREKSGAVVD ARCRSLTAGF VKEKKERGED VELCVYHENL DLLEPHNLVP PGVFTLDDLL RYGEEHKQCP YFSARRMMPF CNVIIYSYHY LLDPKIAERV SRELSKDCIV VFDEAHNIDN VCIESLSIDI TEDSLRKATR GANNLERKIN EMKTSDAEKL QNEYSKLVEG LQAAEQAREE DQFISNPVLP DDLLKEAVPG NIRRAEHFVS FLKRFIEYLK TRMKVMHTIS ETPPSFLTHV KDLTYIERKP LRFCAERLTS LVRTLELINI EDYQPLQEVA TFATLVATYE KGFLLILEPF ESEAATVPNP VLHFTCLDAA IAIKPVFDRF SSVIITSGTL SPLEMYPKML GFNAVMQESY SMTLARRSFL PMVVTRGSDQ AQISSSFQIR NDPGVVRNYG NLVLEFSRIT PDGVVVFFPS YLYMESIISM WQGMGILDSI WNYKLILVET PDAQESSLAL ETYRTACCNG RGALLLCVAR GKVSEGIDFD HHYGRAVINI GVPFQYTESR ILKARLEFLR ENYRIRENDF LSFDAMRHAA QCLGRVLRGK DDYGVMVLAD RRFQKKRNQL PKWINQAMLE SETNLSTDMA AATAKNFLRT MAQPFKARDQ EGISTWSLAD IERHREKQKL EEERAQREVP QNLAYGGAAP APHNGVRNGA GDADEFDDDI DNEDLMMLDA Q // ID G7YX32_CLOSI Unreviewed; 731 AA. AC G7YX32; DT 25-JAN-2012, integrated into UniProtKB/TrEMBL. DT 25-JAN-2012, sequence version 1. DT 11-MAY-2016, entry version 22. DE SubName: Full=DNA excision repair protein ERCC-2 {ECO:0000313|EMBL:GAA57512.1}; DE Flags: Fragment; GN ORFNames=CLF_112827 {ECO:0000313|EMBL:GAA57512.1}; OS Clonorchis sinensis (Chinese liver fluke). OC Eukaryota; Metazoa; Platyhelminthes; Trematoda; Digenea; OC Opisthorchiida; Opisthorchiata; Opisthorchiidae; Clonorchis. OX NCBI_TaxID=79923 {ECO:0000313|EMBL:GAA57512.1, ECO:0000313|Proteomes:UP000008909}; RN [1] {ECO:0000313|Proteomes:UP000008909} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RA Wang X., Chen W., Huang Y., Sun J., Men J., Liu H., Luo F., Guo L., RA Lv X., Deng C., Zhou C., Fan Y., Li X., Huang L., Hu Y., Liang C., RA Hu X., Xu J., Yu X.; RT "The draft genome of the carcinogenic human liver fluke Clonorchis RT sinensis."; RL Submitted (SEP-2011) to the EMBL/GenBank/DDBJ databases. RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=Henan; RA Wang X., Huang Y., Chen W., Liu H., Guo L., Chen Y., Luo F., Zhou W., RA Sun J., Mao Q., Liang P., Zhou C., Tian Y., Men J., Lv X., Huang L., RA Zhou J., Hu Y., Li R., Zhang F., Lei H., Li X., Hu X., Liang C., RA Xu J., Wu Z., Yu X.; RT "The genome and transcriptome sequence of Clonorchis sinensis provide RT insights into the carcinogenic liver fluke."; RL Submitted (OCT-2011) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; DF144805; GAA57512.1; -; Genomic_DNA. DR InParanoid; G7YX32; -. DR Proteomes; UP000008909; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 2. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000008909}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000008909}. FT DOMAIN 1 212 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 183 225 {ECO:0000256|SAM:Coils}. FT NON_TER 1 1 {ECO:0000313|EMBL:GAA57512.1}. SQ SEQUENCE 731 AA; 82126 MW; DC9B564876F8E8CD CRC64; GHGVLEMPSG TGKTVSLLSL IVAYMKARPG AIEKFIYCSR TVPEIEKVVE ELKVLHKYYA AETNEDGCGL LAIALSSRKN LCIERDVRRA GDGAAVDAAC FRLTASFVRK KHASDASTPS CKFYEIMHAN IIVYSYFYLL DPKIANLVSR DLPKNSVIVF DEAHNIDNVC IESMSCVLTR RSLEKATTSL NRLTDRVKDV KQHNAERLKE EYRRLVEGLR QAQVAKETDQ VLANPILPDE ILREAVPGSL RSADSFLAFL RRFLEYVKLR LRIAHVVHET PVAFLRDCLE KVCVDRRPLQ FCAERLRSLL NTLELADYAE FSSLTLLCNF ATLVATYTRG FCLIIEPFDE RSPTVINPVL YFYCMDASLP IRPVFSRFAS VIITSGTLSP LDMYPRILDF HPVNSASFTM TLARSCVLPM IVSKGNDQVP MTTKFESRED MAVVRNYGHL LAQLASVVPD GIVAFFPSYH YLESTFATWY EQHLIEQIQR HKLLFVETQD AEETSLALAA YHRACENGRG AVLLSVARGR VSEGIDFDHH LGRCVIMFGV PYVYTQSRIF KARLDFLREQ YNIQPNEFIT FDAMRHAAQC LGRAIRGKSD YGVMILADKR YARADKRSKL PGWIQSQLQD AFVNLSTEEA VQASRRFLRL MGQPFNKEDQ LGLALLTREH VAKLVAQNQA ASIRPGNPLN PGEPPASLTT ASGHPLNSQQ NPYGPQTSAV PRVISTTTTF S // ID G8B8R9_CANPC Unreviewed; 794 AA. AC G8B8R9; DT 25-JAN-2012, integrated into UniProtKB/TrEMBL. DT 25-JAN-2012, sequence version 1. DT 11-MAY-2016, entry version 25. DE SubName: Full=Putative uncharacterized protein {ECO:0000313|EMBL:CCE41018.1}; GN OrderedLocusNames=CPAR2_300070 {ECO:0000313|CGD:CAL0000144509, GN ECO:0000313|EMBL:CCE41018.1}; OS Candida parapsilosis (strain CDC 317 / ATCC MYA-4646) (Yeast) (Monilia OS parapsilosis). OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; OC Saccharomycetes; Saccharomycetales; Debaryomycetaceae; OC Candida/Lodderomyces clade; Candida. OX NCBI_TaxID=578454 {ECO:0000313|Proteomes:UP000005221}; RN [1] {ECO:0000313|Proteomes:UP000005221} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=CDC 317 / ATCC MYA-4646 {ECO:0000313|Proteomes:UP000005221}; RX PubMed=19465905; DOI=10.1038/nature08064; RA Butler G., Rasmussen M.D., Lin M.F., Santos M.A., Sakthikumar S., RA Munro C.A., Rheinbay E., Grabherr M., Forche A., Reedy J.L., RA Agrafioti I., Arnaud M.B., Bates S., Brown A.J., Brunke S., RA Costanzo M.C., Fitzpatrick D.A., de Groot P.W., Harris D., Hoyer L.L., RA Hube B., Klis F.M., Kodira C., Lennard N., Logue M.E., Martin R., RA Neiman A.M., Nikolaou E., Quail M.A., Quinn J., Santos M.C., RA Schmitzberger F.F., Sherlock G., Shah P., Silverstein K.A., RA Skrzypek M.S., Soll D., Staggs R., Stansfield I., Stumpf M.P., RA Sudbery P.E., Srikantha T., Zeng Q., Berman J., Berriman M., RA Heitman J., Gow N.A., Lorenz M.C., Birren B.W., Kellis M., Cuomo C.A.; RT "Evolution of pathogenicity and sexual reproduction in eight Candida RT genomes."; RL Nature 459:657-662(2009). RN [2] {ECO:0000313|Proteomes:UP000005221} RP GENOME REANNOTATION. RC STRAIN=CDC 317 / ATCC MYA-4646 {ECO:0000313|Proteomes:UP000005221}; RX PubMed=22192698; DOI=10.1186/1471-2164-12-628; RA Guida A., Lindstaedt C., Maguire S.L., Ding C., Higgins D.G., RA Corton N.J., Berriman M., Butler G.; RT "Using RNA-seq to determine the transcriptional landscape and the RT hypoxic response of the pathogenic yeast Candida parapsilosis."; RL BMC Genomics 12:628-628(2011). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; HE605204; CCE41018.1; -; Genomic_DNA. DR CGD; CAL0000144509; CPAR2_300070. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000005221; Chromosome 3. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000005221}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000005221}. FT DOMAIN 7 295 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 266 308 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 794 AA; 91137 MW; B856E040D3893231 CRC64; MKFYIDDLPV LFPYPRIYPE QYAYMSDIKK TLDVGGNCIL EMPSGTGKTI SLLSLTVAYQ MHYPEHRKIV YCSRTMSEIE KALIELHKLM EFRASELGYV EDFRGLGLTS RKNLCLNPLI SREKKGNVVD EMCRRVTNGQ LKEKIEKGVV TEEDQIQDPA KYSLCSFHEK LYDLDPHDLI PQGVYSFDAL IRYCKEMGTC PYFTARRMIP FCNIIIYSYH YLLDPKIADR VSRELSKDSI IIFDEAHNID NVCIESLSLD LTEDVLKRAT RGANKLADAV EDMKAQDSEK LQNEYEQLVE GLRQAEVERE QEMFMSNPIL PQDLLDEAIP GNIRKGEHFV AFLKRFIEYL KTRMKVLHVI SETPTSFLQH LKELTYIDKK PLKFCSERLS LLVKTLELTE IEDFNALKDI ATFATLVSTY DTGFQLILEP FETEGSTVPN PMLHFTCLDA SIAIKPVFER FSSVIITSGT ISPLDMYPKM LNFQTVIQES YAMTLARRSF LPMIVTKGSD QVSISSRFEI RNDPSVVRNY GSLLIEFAKI TPDGMVVFFP SYLYMESIIS MWQTMGVLDE VWKHKLILVE TPDAQETSLA LETYRKACSN GRGAVLLSVA RGKVSEGIDF DHHYGRTVLM IGIPFQYTES RILKARLEFM RDHFQIKEND FLSFDAMRHA AQCLGRVLRG KDDYGIMVLA DRRFARKKAQ LPKWIAQALN DSDTNLSTDM ALATAKKFLR SLAQPTNPKD QEGVSVWDID QLEAYQKQYN QGCVKDKEET EKNGKIEEMG EEFMDIDDED IDLL // ID G8BMZ7_TETPH Unreviewed; 773 AA. AC G8BMZ7; DT 25-JAN-2012, integrated into UniProtKB/TrEMBL. DT 25-JAN-2012, sequence version 1. DT 11-MAY-2016, entry version 29. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CCE61275.1}; GN Name=TPHA0A01920 {ECO:0000313|EMBL:CCE61275.1}; GN OrderedLocusNames=TPHA_0A01920 {ECO:0000313|EMBL:CCE61275.1}; OS Tetrapisispora phaffii (strain ATCC 24235 / CBS 4417 / NBRC 1672 / OS NRRL Y-8282 / UCD 70-5) (Yeast) (Fabospora phaffii). OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; OC Saccharomycetes; Saccharomycetales; Saccharomycetaceae; OC Tetrapisispora. OX NCBI_TaxID=1071381 {ECO:0000313|EMBL:CCE61275.1, ECO:0000313|Proteomes:UP000005666}; RN [1] {ECO:0000313|EMBL:CCE61275.1, ECO:0000313|Proteomes:UP000005666} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 24235 / CBS 4417 / NBRC 1672 / NRRL Y-8282 / UCD 70-5 RC {ECO:0000313|Proteomes:UP000005666}; RX PubMed=22123960; DOI=10.1073/pnas.1112808108; RA Gordon J.L., Armisen D., Proux-Wera E., OhEigeartaigh S.S., RA Byrne K.P., Wolfe K.H.; RT "Evolutionary erosion of yeast sex chromosomes by mating-type RT switching accidents."; RL Proc. Natl. Acad. Sci. U.S.A. 108:20024-20029(2011). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; HE612856; CCE61275.1; -; Genomic_DNA. DR RefSeq; XP_003683709.1; XM_003683661.1. DR STRING; 1071381.XP_003683709.1; -. DR EnsemblFungi; CCE61275; CCE61275; TPHA_0A01920. DR GeneID; 11532204; -. DR KEGG; tpf:TPHA_0A01920; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR KO; K10844; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000005666; Chromosome 1. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000005666}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000005666}. FT DOMAIN 7 285 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 773 AA; 88921 MW; AF6D10C5B63EBB7B CRC64; MKFYIDDLPV LFPYPKIYPE QYHYMCDIKR TLDAGGNSIL EMPSGTGKTV SLLSLTVAYQ MHYPEHRKII YCSRTMSEIE KALVELENLM DYRTKELGFK EEFRGLGLSS RKNLCLHPVV NKERKGTVVD EKCRRMTNGQ AKRAIEADPN ANAELCDYHE NLYKLEVDDY LPNGVFSFEK LIKYCNDKTL CPYFIVRRMI SMCNIIIYSY HYLLDPKIAE RVSNEVSKDS IVIFDEAHNI DNVCIESLSL DLTNDILKKA TKGANTLANK IEDVKKVDSK KLQDEYDKLV QGLHLSENEN EDDEPFVENP VLSEDILKEA IPGNIRRAEH FISFLKRLIE YLKTRMKVLH VISETPKSFL QHLKQLTFID KKPLRFCAER LSLLVRTLEV TDVEDFAALK DIATFATLVS TYEDGFLLII EPFELENAAV PNPILRFTCL DASIAIKPVF ERFSSVIITS GTISPLDMYP RMLNFTTVLQ KSYTMTLTKK TFLPMIITKG SDQVAISSRF EIRNDPSIVR NYGSMLIEFA KITPDGMVVF FPSYLYMESI ISMWQTMGIL DEVWKHKLIL VETPDAQETS LALETYRKAC SNGRGAILFS VARGKVSEGI DFDHHYGRTV LMIGIPFQYT ESRILKARLE FLRENYQIRE NDFLSFDAMR HAAQCLGRVL RGKDDYGVMV LADRRFSRRR NQLPKWIAQG LSDANLNLST DMAVSNTKKF LRTMAQPTNP NDQEGVSVWN HEELVKHQEE IENRRTGLHN AAIGETEDIE MKY // ID G8JQL1_ERECY Unreviewed; 756 AA. AC G8JQL1; DT 25-JAN-2012, integrated into UniProtKB/TrEMBL. DT 25-JAN-2012, sequence version 1. DT 11-MAY-2016, entry version 27. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AET38995.1}; GN OrderedLocusNames=Ecym_3517 {ECO:0000313|EMBL:AET38995.1}; OS Eremothecium cymbalariae (strain CBS 270.75 / DBVPG 7215 / KCTC 17166 OS / NRRL Y-17582) (Yeast). OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; OC Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Eremothecium. OX NCBI_TaxID=931890 {ECO:0000313|EMBL:AET38995.1, ECO:0000313|Proteomes:UP000006790}; RN [1] {ECO:0000313|Proteomes:UP000006790} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=CBS 270.75 / DBVPG 7215 / KCTC 17166 / NRRL Y-17582 RC {ECO:0000313|Proteomes:UP000006790}; RX DOI=10.1534/g3.111.001032; RA Wendland J., Walther A.; RT "Genome evolution in the Eremothecium clade of the Saccharomyces RT complex revealed by comparative genomics."; RL G3 (Bethesda) 1:539-548(2011). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002499; AET38995.1; -; Genomic_DNA. DR RefSeq; XP_003645812.1; XM_003645764.1. DR STRING; 931890.XP_003645812.1; -. DR EnsemblFungi; AET38995; AET38995; Ecym_3517. DR GeneID; 11472301; -. DR KEGG; erc:Ecym_3517; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; G8JQL1; -. DR KO; K10844; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000006790; Chromosome 3. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000006790}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000006790}. FT DOMAIN 7 286 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 756 AA; 87303 MW; 355D13B6D59BCC84 CRC64; MKFYIDDLPV IFPYPKIYPE QYQYMCDLKK TLDIGGNSIL EMPSGTGKTV SLLSLTVAYQ MHYPEHRKIV YCSRTMSEIE KALVELESLM DYRAKELEYQ EEFRGLGLTS RKNLCLHPRV SKERKGSVVD EKCRRMTNGQ AKTKKEQDIE ANVELCEYHE NMYNYQPEEY LPLGVYSFEK LIKYCEDKTI CPYFTVRRMI SMCNIIIYSY HYLLDPRIEE RVSREISQNA IVIFDEAHNI DNVCIESLSL DLTKDLLKRA SRGANALGKK VDEVRKVDTM KLQQEYQDLV KGLRANDILD PDEEPLIPTP VLSRDVLKEA VPGNIRRAEH FVSFLKRFIE YLKTRMKVLH VISETPNSFL HHLKQLTFIE RKPLRFCSER LSLLVRTLEV DEIEDFNALK DIATFATLIS TYESGFLLII EPYEIENAAV PNPIMRFTCL DASIAIKPVF ERFSSVIITS GTISPLDMYP KMLNFGTVVQ KSYSMTLAEK SFLPMIVTKG SDQVAISSRF EIRNDPSIVR NYGSMLVEFA KITPDGMVVF FPSYLYMESI ISTWQTMGIL DEVWKYKLIL VETPDAQETS LALETYRKAC SNGRGAILMS VARGKISEGI DFDQHYGRTV LMIGIPFQYT ESRILKARLE FLRENYQIRE NDFLSFDAMR HAAQCLGRVL RGKDDYGVMV LADRRFSRKK SQLPKWILQG LSDADLNLST DMAIANTKQF LRTMAQASDP KDHEGVSVWN INQLLNYQEE QKKKPI // ID G8LWA8_CLOCD Unreviewed; 784 AA. AC G8LWA8; DT 22-FEB-2012, integrated into UniProtKB/TrEMBL. DT 22-FEB-2012, sequence version 1. DT 11-MAY-2016, entry version 23. DE SubName: Full=DNA helicase, Rad3 {ECO:0000313|EMBL:AEV69755.1}; GN OrderedLocusNames=Clocl_3240 {ECO:0000313|EMBL:AEV69755.1}; OS Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45). OC Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; OC Ruminiclostridium. OX NCBI_TaxID=720554 {ECO:0000313|EMBL:AEV69755.1, ECO:0000313|Proteomes:UP000005435}; RN [1] {ECO:0000313|Proteomes:UP000005435} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=DSM 19732 / NBRC 101661 / EBR45 RC {ECO:0000313|Proteomes:UP000005435}; RG US DOE Joint Genome Institute; RA Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., RA Peters L., Teshima H., Detter J.C., Han C., Tapia R., Land M., RA Hauser L., Kyrpides N., Ivanova N., Pagani I., Kitzmiller T., Lynd L., RA Izquierdo J., Woyke T.; RT "Complete sequence of Clostridium clariflavum DSM 19732."; RL Submitted (DEC-2011) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP003065; AEV69755.1; -; Genomic_DNA. DR RefSeq; WP_014256288.1; NC_016627.1. DR STRING; 720554.Clocl_3240; -. DR EnsemblBacteria; AEV69755; AEV69755; Clocl_3240. DR KEGG; ccl:Clocl_3240; -. DR eggNOG; ENOG4107QX6; Bacteria. DR eggNOG; COG1199; LUCA. DR OMA; DYNYYFD; -. DR BioCyc; CCLA720554:GI2T-3235-MONOMER; -. DR Proteomes; UP000005435; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF00270; DEAD; 1. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 3. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000313|EMBL:AEV69755.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000005435}; KW Helicase {ECO:0000313|EMBL:AEV69755.1}; KW Hydrolase {ECO:0000313|EMBL:AEV69755.1}; KW Nucleotide-binding {ECO:0000313|EMBL:AEV69755.1}; KW Reference proteome {ECO:0000313|Proteomes:UP000005435}. FT DOMAIN 184 432 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 784 AA; 91154 MW; 809E0136A8276748 CRC64; MNTEKKEIKV SVRNLVEFLL RAGDIDSSFF RINRAVEGTR IHKKIQKAQK ECYRPEVPLK YSIDYREFVL TVEGRADGII EDSDGVTIDE IKSTMSPLEI IDENYNEMHW AQAKCYAYIY AVQNNIEKVN IRLTYCHLDT EEIKYLNKSF SVEQLKDFFD QLAQNYYSWA KLEYDWQLER DESIRKLTFP FDMYRKGQRE LAVAVYKTIT SGKNIFVQAP TGIGKTISTL FPSIKAMGEG NTSKIFYLTA KTITRSVAEE AFLIMRKKGL KFRAITLTAK EKICIKEKSS CNPADCEVAK GHFDRINSAI MDILAHEEEL KRETIEKYAA KHKVCPFEFS LDLTLWADAV ICDYNYVFDP RVYLKRFFTD KGDYIFLIDE AHNLVDRARE MYSAEIYKKP VLKMKKEMKE IAPKISKALN RINTFMLNKK KLCNEKGFYV SKEGDKEIYS ILRMFVSECE AYFAKNENIK AGDELLELYF NALAFIRICE LYDERYVTYV EIQENDVKLK LFCLDPSYLL HEALKKGKSG VFFSATLIPL EYYRGILGGS AEDYIMSIES PFNLENRKLL VADYISTRYA NRERSYKAIV ESIWNLIKCK CGNYMVFFPS YQYMNTVYEL FGSEHPDVKV HVQAASMTEE EREGFLALFV PQPDVTTIGF CVMGGIFSEG IDLKNDRLIG TVIVGVGLPQ VCLERDIIRE YFNDRNNAGF EYAYMFPGMN KVMQAAGRVI RSETDRGIIL LIDERFTSRN YLKLFPREWF PYTRVIKADD ITKFANEFWN KGDT // ID G8YL88_PICSO Unreviewed; 795 AA. AC G8YL88; DT 22-FEB-2012, integrated into UniProtKB/TrEMBL. DT 22-FEB-2012, sequence version 1. DT 11-MAY-2016, entry version 28. DE SubName: Full=Piso0_001608 protein {ECO:0000313|EMBL:CCE88822.1}; GN Name=Piso0_001608 {ECO:0000313|EMBL:CCE88822.1}; GN ORFNames=GNLVRS01_PISO0F10125g {ECO:0000313|EMBL:CCE88822.1}; OS Pichia sorbitophila (strain ATCC MYA-4447 / BCRC 22081 / CBS 7064 / OS NBRC 10061 / NRRL Y-12695) (Hybrid yeast). OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; OC Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Millerozyma. OX NCBI_TaxID=559304 {ECO:0000313|EMBL:CCE88822.1, ECO:0000313|Proteomes:UP000005222}; RN [1] {ECO:0000313|Proteomes:UP000005222} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC MYA-4447 / BCRC 22081 / CBS 7064 / NBRC 10061 / NRRL RC Y-12695 {ECO:0000313|Proteomes:UP000005222}; RX DOI=10.1534/g3.111.000745; RA Leh Louis V., Despons L., Friedrich A., Martin T., Durrens P., RA Casaregola S., Neuveglise C., Fairhead C., Marck C., Cruz J.A., RA Straub M.-L., Kugler V., Sacerdot C., Uzunov Z., Thierry A., Weiss S., RA Bleykasten C., De Montigny J., Jacques N., Jung P., Lemaire M., RA Mallet S., Morel G., Richard G.-F., Sarkar A., Savel G., RA Schacherer J., Seret M.-L., Talla E., Samson G., Jubin C., Poulain J., RA Vacherie B., Barbe V., Pelletier E., Sherman D.J., Westhof E., RA Weissenbach J., Baret P.V., Wincker P., Gaillardin C., Dujon B., RA Souciet J.-L.; RT "Pichia sorbitophila, an interspecies yeast hybrid reveals early steps RT of genome resolution following polyploidization."; RL G3 (Bethesda) 2:299-311(2012). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FO082054; CCE88822.1; -; Genomic_DNA. DR RefSeq; XP_004202128.1; XM_004202080.1. DR EnsemblFungi; CCE88822; CCE88822; GNLVRS01_PISO0F10125g. DR GeneID; 14525382; -. DR InParanoid; G8YL88; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000005222; Chromosome F. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000005222}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000005222}. FT DOMAIN 7 295 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 795 AA; 91579 MW; 594F0DF90267C660 CRC64; MKFYIDDLPI LFPYPKIYPE QYSYMCDIKR TLDVGGNCIL EMPSGTGKTI SLLSITVAYQ MHYPEHRKVV YCSRTMSEIE KALIELHNLM KYRAEQLGYV EEFRGLGLTS RKNLCLHPSI SKEPKGVVVD EKCRRITNGQ LKQQIENGKV SEEDQKRHPE TKQLCSYHEE LYDMEQHNLI PAGVYSFDAL INYCKARGTC PYFTVRRMIP YCNIIIYSYH YLLDPKIAER VSKDISRDSI IIFDEAHNID NVCIESLSLD LTDDTLQRAT RGATKLGDAI DDMKSQDSEK LQNEYEKLVE GLRQSEIERE EELFMSNPIL PKDLLDEAVP GNIRKGEHFI SFLKRFIEYL KTRMKVLHVI SETPTSFLQH LKDLTFIDRK PLRFCSERLS LLVRTLELTE IEDFTALKDI ATFATLVSTY ETGFQLILEP FETEGSSVPN PILHFTCLDA SIAIKPVFDR FSSVIITSGT ISPLDMYPRM LNFQTVIQES YTITLARRSF LPMIVTKGAD QVSISSRFEI RNDPSVVRNY GSLLIEFSKI TPDGMVVFFP SYLYMESIIS MWQNMGVLDE VWKYKLILVE TPDAQETSLA LETFRKACSN GRGAVLLSVA RGKVSEGIDF DHHYGRTVLM IGIPFQYTES RILKARLEFL RDHFQIREND FLSFDAMRHA AQCLGRVLRG KDDYGIMVLA DRRFSRKKSQ LPKWIAQALL DSDTNLSTDM ALANAKKFLR SLAQPTNPKD QEGVSVWNYE QLLKHQQEQK SKFQDVSEHP NKETKEAHDN ADEFMDIDDD DFSLL // ID G8YNL8_PICSO Unreviewed; 795 AA. AC G8YNL8; DT 22-FEB-2012, integrated into UniProtKB/TrEMBL. DT 22-FEB-2012, sequence version 1. DT 11-MAY-2016, entry version 27. DE SubName: Full=Piso0_001608 protein {ECO:0000313|EMBL:CCE79536.1}; GN Name=Piso0_001608 {ECO:0000313|EMBL:CCE79536.1}; GN ORFNames=GNLVRS01_PISO0E08782g {ECO:0000313|EMBL:CCE79536.1}; OS Pichia sorbitophila (strain ATCC MYA-4447 / BCRC 22081 / CBS 7064 / OS NBRC 10061 / NRRL Y-12695) (Hybrid yeast). OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; OC Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Millerozyma. OX NCBI_TaxID=559304 {ECO:0000313|EMBL:CCE79536.1, ECO:0000313|Proteomes:UP000005222}; RN [1] {ECO:0000313|Proteomes:UP000005222} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC MYA-4447 / BCRC 22081 / CBS 7064 / NBRC 10061 / NRRL RC Y-12695 {ECO:0000313|Proteomes:UP000005222}; RX DOI=10.1534/g3.111.000745; RA Leh Louis V., Despons L., Friedrich A., Martin T., Durrens P., RA Casaregola S., Neuveglise C., Fairhead C., Marck C., Cruz J.A., RA Straub M.-L., Kugler V., Sacerdot C., Uzunov Z., Thierry A., Weiss S., RA Bleykasten C., De Montigny J., Jacques N., Jung P., Lemaire M., RA Mallet S., Morel G., Richard G.-F., Sarkar A., Savel G., RA Schacherer J., Seret M.-L., Talla E., Samson G., Jubin C., Poulain J., RA Vacherie B., Barbe V., Pelletier E., Sherman D.J., Westhof E., RA Weissenbach J., Baret P.V., Wincker P., Gaillardin C., Dujon B., RA Souciet J.-L.; RT "Pichia sorbitophila, an interspecies yeast hybrid reveals early steps RT of genome resolution following polyploidization."; RL G3 (Bethesda) 2:299-311(2012). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FO082055; CCE79536.1; -; Genomic_DNA. DR RefSeq; XP_004202752.1; XM_004202704.1. DR EnsemblFungi; CCE79536; CCE79536; GNLVRS01_PISO0E08782g. DR GeneID; 14526202; -. DR Proteomes; UP000005222; Chromosome E. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000005222}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000005222}. FT DOMAIN 7 295 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 795 AA; 91500 MW; 302415B19F81FAF9 CRC64; MKFYIDDLPI LFPYPKIYPE QYSYMCDIKR TLDVGGNCIL EMPSGTGKTI SLLSITVAYQ MHYPEHRKVV YCSRTMSEIE KALIELHNLM KYRAEQLGYV EEFRGLGLTS RKNLCLHPSV SKEPKGVVVD EKCRRITNGQ LKQQIENGKV SEEDQKRHPE TKQLCSYHEE LNDMEQHNLI PAGVYSFDAL TNYCKARGTC PYFTVRRMIP YCNIIIYSYH YLLDPKIAER VSKDISRDSI IIFDEAHNID NVCIESLSLD LTDDTLQRAT RGATKLGDAI DDMKSQDSEK LQNEYEKLVE GLRQSEIERE EELFMSNPIL PKDLLDEAVP GNIRKGEHFI SFLKRFIEYL KTRMKVLHVI SETPTSFLQH LKDLTFIDRK PLRFCSERLS LLVRTLELTE IEDFTALKDI ATFATLVSTY ETGFQLILEP FETEGSSVPN PILHFTCLDA SIAIKPVFDR FSSVIITSGT ISPLDMYPRM LNFQTVIQES YTITLARRSF LPMIVTKGAD QVSISSRFEI RNDPSVVRNY GSLVIEFSKI TPDGMVVFFP SYLYMESIIS MWQNMGVLDE VWKYKLILVE TPDAQETSLA LETFRKACSN GRGAVLLSVA RGKVSEGIDF DHHYGRTVLM IGIPFQYTES RILKARLEFL RDHFQIREND FLSFDAMRHA AQCLGRVLRG KDDYGIMVLA DRRFSRKKSQ LPKWIAQALL DSDTNLSTDM ALANAKKFLR SLAQPTNPKD QEGVSVWNYE QLLKHQEEQK SKFQDVSERS NEETKQAHDN ADEFMDIDDD DFSLL // ID G8ZLG5_TORDC Unreviewed; 775 AA. AC G8ZLG5; DT 22-FEB-2012, integrated into UniProtKB/TrEMBL. DT 22-FEB-2012, sequence version 1. DT 11-MAY-2016, entry version 30. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CCE89459.1}; GN Name=TDEL0A01270 {ECO:0000313|EMBL:CCE89459.1}; GN ORFNames=TDEL_0A01270 {ECO:0000313|EMBL:CCE89459.1}; OS Torulaspora delbrueckii (strain ATCC 10662 / CBS 1146 / NBRC 0425 / OS NCYC 2629 / NRRL Y-866) (Yeast) (Candida colliculosa). OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; OC Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Torulaspora. OX NCBI_TaxID=1076872 {ECO:0000313|Proteomes:UP000005627}; RN [1] {ECO:0000313|EMBL:CCE89459.1, ECO:0000313|Proteomes:UP000005627} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 10662 / CBS 1146 / NBRC 0425 / NCYC 2629 / NRRL Y-866 RC {ECO:0000313|Proteomes:UP000005627}; RX PubMed=22123960; DOI=10.1073/pnas.1112808108; RA Gordon J.L., Armisen D., Proux-Wera E., OhEigeartaigh S.S., RA Byrne K.P., Wolfe K.H.; RT "Evolutionary erosion of yeast sex chromosomes by mating-type RT switching accidents."; RL Proc. Natl. Acad. Sci. U.S.A. 108:20024-20029(2011). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; HE616742; CCE89459.1; -; Genomic_DNA. DR RefSeq; XP_003678670.1; XM_003678622.1. DR EnsemblFungi; CCE89459; CCE89459; TDEL_0A01270. DR GeneID; 11502593; -. DR KEGG; tdl:TDEL_0A01270; -. DR InParanoid; G8ZLG5; -. DR KO; K10844; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000005627; Chromosome 1. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000005627}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000005627}. FT DOMAIN 7 285 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 775 AA; 89352 MW; 5BF261298AF5423B CRC64; MKFYIDDLPV LFPYPKIYPE QYKYMCDIKK TLDAGGNSIL EMPSGTGKTV SLLSLTIAYQ LHYPEHRKII YCSRTMSEIE KALVELENLM DYRSRELGVH EDFRGLGLTS RKNLCLHPIV SKERKGTVVD EKCRRMTNGQ AKQKLETDPD SKVELCEYHE NLYNIEVEDY LPKGVYSFER LIKYCEERKL CPYFIVRRMI SLCNIIIYSY HYLLDPKIAE RVSREMSKDG IVIFDEAHNI DNVCIESLSL DLTNDVLKRA TKGANALENR IEEVRRVDAQ KLQDEYDKLV QGLHTAEILE PEEESALETP VLSQDLLTEA IPGNIRRAEH FVSFLKRLIE YLKTRMKVLH VISETPKSFL QHLKQLTFID RKPLRFCSER LSLLVRTLEV SEIEDFMALK DIATFATLIS TYETGFLLII EPYEIENAAV PNPIMRFTCL DASIAIKPVF ERFSSVIITS GTISPLDMYP RMLNFNTVLQ KSYAMTLAKK SFLPMIVTKG SDQVAISSRF EIRNDPSIVR NYGSMLVEFS KITPDGMVVF FPSYLYMESI ISMWQTMGIL DEVWKHKLIL VETPDAQETS LALETYRKAC SNGRGAILLS VARGKVSEGI DFDHHYGRTV LMIGIPFQYT ESRILKARLE FLRENYQIRE NDFLSFDAMR HAAQCLGRVL RGKDDYGVMV LADRRFSRKR NQLPKWISQG LSDADLNLST DMAIANAKQF LRTMAQPTDP KDQEGVSVWR YEELLQYQEE EKSKKGYQNG NGTVVNELDV DIEMN // ID G9N6N8_HYPVG Unreviewed; 763 AA. AC G9N6N8; DT 22-FEB-2012, integrated into UniProtKB/TrEMBL. DT 22-FEB-2012, sequence version 1. DT 11-MAY-2016, entry version 30. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EHK17796.1}; GN ORFNames=TRIVIDRAFT_214193 {ECO:0000313|EMBL:EHK17796.1}; OS Hypocrea virens (strain Gv29-8 / FGSC 10586) (Gliocladium virens) OS (Trichoderma virens). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; OC Sordariomycetes; Hypocreomycetidae; Hypocreales; Hypocreaceae; OC Trichoderma. OX NCBI_TaxID=413071 {ECO:0000313|EMBL:EHK17796.1, ECO:0000313|Proteomes:UP000007115}; RN [1] {ECO:0000313|EMBL:EHK17796.1, ECO:0000313|Proteomes:UP000007115} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Gv29-8 / FGSC 10586 {ECO:0000313|Proteomes:UP000007115}; RX PubMed=21501500; DOI=10.1186/gb-2011-12-4-r40; RA Kubicek C.P., Herrera-Estrella A., Seidl-Seiboth V., Martinez D.A., RA Druzhinina I.S., Thon M., Zeilinger S., Casas-Flores S., Horwitz B.A., RA Mukherjee P.K., Mukherjee M., Kredics L., Alcaraz L.D., Aerts A., RA Antal Z., Atanasova L., Cervantes-Badillo M.G., Challacombe J., RA Chertkov O., McCluskey K., Coulpier F., Deshpande N., von Doehren H., RA Ebbole D.J., Esquivel-Naranjo E.U., Fekete E., Flipphi M., Glaser F., RA Gomez-Rodriguez E.Y., Gruber S., Han C., Henrissat B., Hermosa R., RA Hernandez-Onate M., Karaffa L., Kosti I., Le Crom S., Lindquist E., RA Lucas S., Luebeck M., Luebeck P.S., Margeot A., Metz B., Misra M., RA Nevalainen H., Omann M., Packer N., Perrone G., Uresti-Rivera E.E., RA Salamov A., Schmoll M., Seiboth B., Shapiro H., Sukno S., RA Tamayo-Ramos J.A., Tisch D., Wiest A., Wilkinson H.H., Zhang M., RA Coutinho P.M., Kenerley C.M., Monte E., Baker S.E., Grigoriev I.V.; RT "Comparative genome sequence analysis underscores mycoparasitism as RT the ancestral life style of Trichoderma."; RL Genome Biol. 12:R40.1-R40.15(2011). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:EHK17796.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ABDF02000088; EHK17796.1; -; Genomic_DNA. DR RefSeq; XP_013951989.1; XM_014096514.1. DR EnsemblFungi; EHK17796; EHK17796; TRIVIDRAFT_214193. DR GeneID; 25790792; -. DR InParanoid; G9N6N8; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000007115; Unassembled WGS sequence. DR GO; GO:0000439; C:core TFIIH complex; IEA:EnsemblFungi. DR GO; GO:0005675; C:holo TFIIH complex; IEA:EnsemblFungi. DR GO; GO:0000112; C:nucleotide-excision repair factor 3 complex; IEA:EnsemblFungi. DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:EnsemblFungi. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0043141; F:ATP-dependent 5'-3' DNA helicase activity; IEA:EnsemblFungi. DR GO; GO:0003684; F:damaged DNA binding; IEA:EnsemblFungi. DR GO; GO:0033683; P:nucleotide-excision repair, DNA incision; IEA:EnsemblFungi. DR GO; GO:0070816; P:phosphorylation of RNA polymerase II C-terminal domain; IEA:EnsemblFungi. DR GO; GO:0045951; P:positive regulation of mitotic recombination; IEA:EnsemblFungi. DR GO; GO:0010525; P:regulation of transposition, RNA-mediated; IEA:EnsemblFungi. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:EnsemblFungi. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000007115}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000007115}. FT DOMAIN 1 256 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 227 269 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 763 AA; 87577 MW; 2A27C195B3896127 CRC64; MQTLDAGGHC VLEMPSGTGK TVSLLSLIVA YQQHMPEKRK LIYCSRTMSE IEKALVELQS LMKYRAEQLG YEEEFRGLGL TSRKNLCLHP SVKREKSGSI VDARCRSLTA GFVKEKKDRG ENVDVCTYHD NLDLLEPHNL IPNGVWSFDA LLKYGEEHKQ CPYFTARRMM EYCNVVIFSY HYLLDPKIAE RVSKDFSKDC IVVFDEAHNI DNVCIESLST DITEDSIRKA TRSAQHLERR IAEMRETDQE QLQNEYEKLV QGLREADESR QEDAFMANPA LPDDLLKEAV PGNIRRAEHF VAFLKRFLEY LKTRMKVRQV ISETPPSFLA HLKEHTFIEK KPLRFCAERL TSLVRTLELT NIEDYQALQE VATFATLVAT YEKGFLLILE PYESDTAEVP NPTLHFTCLD AAIAIRPVFE RFYSVIITSG TISPLEMYPK MLDFSTVIQE SYSMTLARRS FLPMIVTRGS DQASVSSSFQ VRNEPSVVRN YGNLLTEFAR ITPDGMVVFF PSYLYMESII SMWQGMGILD EVWKYKLILV ETPDAQETSL ALETYRTACC NGRGAILLCV ARGKVSEGID FDHQYGRTVL CIGVPFQYTE SRILKARLEF LRETYRIKEN DFLSFDAMRH AAQCLGRVLR GKDDYGVMVL ADRRFQKKRT QLPKWINQGL QDADTNLSTD MAVSSARRFL KTMAQPFRSK DQEGISTWGY EDLMQHQQKI EEERGEEPPP VISNTRPVHG SIAATYESDY EELDQEMMEL EGF // ID G9NKG2_HYPAI Unreviewed; 769 AA. AC G9NKG2; DT 22-FEB-2012, integrated into UniProtKB/TrEMBL. DT 22-FEB-2012, sequence version 1. DT 11-MAY-2016, entry version 26. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EHK48385.1}; GN ORFNames=TRIATDRAFT_214371 {ECO:0000313|EMBL:EHK48385.1}; OS Hypocrea atroviridis (strain ATCC 20476 / IMI 206040) (Trichoderma OS atroviride). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; OC Sordariomycetes; Hypocreomycetidae; Hypocreales; Hypocreaceae; OC Trichoderma. OX NCBI_TaxID=452589 {ECO:0000313|EMBL:EHK48385.1, ECO:0000313|Proteomes:UP000005426}; RN [1] {ECO:0000313|EMBL:EHK48385.1, ECO:0000313|Proteomes:UP000005426} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 20476 / IMI 206040 {ECO:0000313|Proteomes:UP000005426}; RX PubMed=21501500; DOI=10.1186/gb-2011-12-4-r40; RA Kubicek C.P., Herrera-Estrella A., Seidl-Seiboth V., Martinez D.A., RA Druzhinina I.S., Thon M., Zeilinger S., Casas-Flores S., Horwitz B.A., RA Mukherjee P.K., Mukherjee M., Kredics L., Alcaraz L.D., Aerts A., RA Antal Z., Atanasova L., Cervantes-Badillo M.G., Challacombe J., RA Chertkov O., McCluskey K., Coulpier F., Deshpande N., von Doehren H., RA Ebbole D.J., Esquivel-Naranjo E.U., Fekete E., Flipphi M., Glaser F., RA Gomez-Rodriguez E.Y., Gruber S., Han C., Henrissat B., Hermosa R., RA Hernandez-Onate M., Karaffa L., Kosti I., Le Crom S., Lindquist E., RA Lucas S., Luebeck M., Luebeck P.S., Margeot A., Metz B., Misra M., RA Nevalainen H., Omann M., Packer N., Perrone G., Uresti-Rivera E.E., RA Salamov A., Schmoll M., Seiboth B., Shapiro H., Sukno S., RA Tamayo-Ramos J.A., Tisch D., Wiest A., Wilkinson H.H., Zhang M., RA Coutinho P.M., Kenerley C.M., Monte E., Baker S.E., Grigoriev I.V.; RT "Comparative genome sequence analysis underscores mycoparasitism as RT the ancestral life style of Trichoderma."; RL Genome Biol. 12:R40.1-R40.15(2011). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:EHK48385.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ABDG02000018; EHK48385.1; -; Genomic_DNA. DR RefSeq; XP_013946556.1; XM_014091081.1. DR EnsemblFungi; EHK48385; EHK48385; TRIATDRAFT_214371. DR GeneID; 25777675; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000005426; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000005426}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000005426}. FT DOMAIN 1 260 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 231 273 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 769 AA; 88231 MW; 12B63587FBB3A1C0 CRC64; MCDLKKTLDA GGHCVLEMPS GTGKTVSLLS LIVAYQQHMP EKRKLIYCSR TMSEIEKALV ELQSLMKYRA EELGYEEEFR GLGLTSRKNL CLHPSVKREK SGSVVDARCR SLTAGFVKEK KDRGENVDVC VYHDNLDLLE PHNLIPNGVW SFDALLKYGE EHKQCPYFTA RRMMQYCNVV IFSYHYLLDP KIAERVTKDF SKDCIVVFDE AHNIDNVCIE SLSTDITEDS IRKATRSAQH LERRIAEMRE TDQEQLQNEY EKLVQGLREA DESRQEDAFM ANPALPDDLL KEAVPGNIRR AEHFVAFLKR FLEYLKTRMK VRQVISETPL SFLAHLKEHT FIERKPLRFC AERLTSLVRT LELMNIEDYQ ALQEVATFAT LVATYEKGFL LILEPYESDT AEVPNPTLHF TCLDAAIAIR PVFERFYSVI ITSGTISPLE MYPKMLDFAT VIQESYSMTL ARRSFLPMIV TRGSDQASVS SSFQVRNEPS VVRNYGNLLT EFAKITPDGL VVFFPSYLYM ESIISMWQGM GILDEVWKYK LILVETPDAQ ETSLALETYR TACCNGRGAI LLCVARGKVS EGIDFDHQYG RTVLCIGVPF QYTESRILKA RLEFLRETYR IKENDFLSFD AMRHAAQCLG RVLRGKDDYG VMVLADRRFQ KKRTQLPKWI NQGLSDADTN LSTDMAVSSA RRFLKTMAQP FRSKDQEGIS TWGYEDLMQH QRKIEEERGD EPPPPSMANA RAAANDNRTT TYESDYEDID QDMMELEGF // ID H0VTQ9_CAVPO Unreviewed; 763 AA. AC H0VTQ9; DT 22-FEB-2012, integrated into UniProtKB/TrEMBL. DT 22-FEB-2012, sequence version 1. DT 11-MAY-2016, entry version 34. DE SubName: Full=Uncharacterized protein {ECO:0000313|Ensembl:ENSCPOP00000014068}; GN Name=ERCC2 {ECO:0000313|Ensembl:ENSCPOP00000014068}; OS Cavia porcellus (Guinea pig). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; OC Hystricognathi; Caviidae; Cavia. OX NCBI_TaxID=10141 {ECO:0000313|Ensembl:ENSCPOP00000014068}; RN [1] {ECO:0000313|Ensembl:ENSCPOP00000014068} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=2N {ECO:0000313|Ensembl:ENSCPOP00000014068}; RX PubMed=21993624; DOI=10.1038/nature10530; RA Lindblad-Toh K., Garber M., Zuk O., Lin M.F., Parker B.J., RA Washietl S., Kheradpour P., Ernst J., Jordan G., Mauceli E., RA Ward L.D., Lowe C.B., Holloway A.K., Clamp M., Gnerre S., Alfoldi J., RA Beal K., Chang J., Clawson H., Cuff J., Di Palma F., Fitzgerald S., RA Flicek P., Guttman M., Hubisz M.J., Jaffe D.B., Jungreis I., RA Kent W.J., Kostka D., Lara M., Martins A.L., Massingham T., Moltke I., RA Raney B.J., Rasmussen M.D., Robinson J., Stark A., Vilella A.J., RA Wen J., Xie X., Zody M.C., Baldwin J., Bloom T., Chin C.W., Heiman D., RA Nicol R., Nusbaum C., Young S., Wilkinson J., Worley K.C., Kovar C.L., RA Muzny D.M., Gibbs R.A., Cree A., Dihn H.H., Fowler G., Jhangiani S., RA Joshi V., Lee S., Lewis L.R., Nazareth L.V., Okwuonu G., RA Santibanez J., Warren W.C., Mardis E.R., Weinstock G.M., Wilson R.K., RA Delehaunty K., Dooling D., Fronik C., Fulton L., Fulton B., Graves T., RA Minx P., Sodergren E., Birney E., Margulies E.H., Herrero J., RA Green E.D., Haussler D., Siepel A., Goldman N., Pollard K.S., RA Pedersen J.S., Lander E.S., Kellis M.; RT "A high-resolution map of human evolutionary constraint using 29 RT mammals."; RL Nature 478:476-482(2011). RN [2] {ECO:0000313|Ensembl:ENSCPOP00000014068} RP IDENTIFICATION. RC STRAIN=2N {ECO:0000313|Ensembl:ENSCPOP00000014068}; RG Ensembl; RL Submitted (JAN-2012) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an Ensembl CC automatic analysis pipeline and should be considered as CC preliminary data. {ECO:0000313|Ensembl:ENSCPOP00000014068}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AAKN02048243; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR STRING; 10141.ENSCPOP00000014068; -. DR Ensembl; ENSCPOT00000015753; ENSCPOP00000014068; ENSCPOG00000015600. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR GeneTree; ENSGT00550000075092; -. DR InParanoid; H0VTQ9; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG70W3CM; -. DR TreeFam; TF101232; -. DR Proteomes; UP000005447; Unassembled WGS sequence. DR GO; GO:0019907; C:cyclin-dependent protein kinase activating kinase holoenzyme complex; IEA:Ensembl. DR GO; GO:0005737; C:cytoplasm; IEA:Ensembl. DR GO; GO:0005675; C:holo TFIIH complex; IEA:Ensembl. DR GO; GO:0071817; C:MMXD complex; IEA:Ensembl. DR GO; GO:0043139; F:5'-3' DNA helicase activity; IEA:Ensembl. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0008353; F:RNA polymerase II carboxy-terminal domain kinase activity; IEA:Ensembl. DR GO; GO:0007568; P:aging; IEA:Ensembl. DR GO; GO:0006915; P:apoptotic process; IEA:Ensembl. DR GO; GO:0030282; P:bone mineralization; IEA:Ensembl. DR GO; GO:0008283; P:cell proliferation; IEA:Ensembl. DR GO; GO:0032289; P:central nervous system myelin formation; IEA:Ensembl. DR GO; GO:0007059; P:chromosome segregation; IEA:Ensembl. DR GO; GO:0040016; P:embryonic cleavage; IEA:Ensembl. DR GO; GO:0043249; P:erythrocyte maturation; IEA:Ensembl. DR GO; GO:0030198; P:extracellular matrix organization; IEA:Ensembl. DR GO; GO:0035315; P:hair cell differentiation; IEA:Ensembl. DR GO; GO:0048820; P:hair follicle maturation; IEA:Ensembl. DR GO; GO:0060218; P:hematopoietic stem cell differentiation; IEA:Ensembl. DR GO; GO:0001701; P:in utero embryonic development; IEA:Ensembl. DR GO; GO:0035264; P:multicellular organism growth; IEA:Ensembl. DR GO; GO:0033683; P:nucleotide-excision repair, DNA incision; IEA:Ensembl. DR GO; GO:0043388; P:positive regulation of DNA binding; IEA:Ensembl. DR GO; GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IEA:Ensembl. DR GO; GO:0009791; P:post-embryonic development; IEA:Ensembl. DR GO; GO:1901990; P:regulation of mitotic cell cycle phase transition; IEA:Ensembl. DR GO; GO:0006979; P:response to oxidative stress; IEA:Ensembl. DR GO; GO:0021510; P:spinal cord development; IEA:Ensembl. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:Ensembl. DR GO; GO:0006283; P:transcription-coupled nucleotide-excision repair; IEA:Ensembl. DR GO; GO:0009650; P:UV protection; IEA:Ensembl. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000005447}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000005447}. FT DOMAIN 10 286 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 252 279 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 763 AA; 87183 MW; E1EDF5024B403FEA CRC64; AHRARLNVDG LLVYFPYDYI YPEQFSYMLE LKRTLDAKGH GVLEMPSGTG KTVSLLALIM AYQRAYPLEV TKLIYCSRTV PEIEKVIEEL RKLLSFYEKQ EGEKLSFLGL ALSSRKNLCI HPEVTPLRFG KDVDGKCHSL TASYVRAQYQ QDTSMPHCRF YEEFDAHGRQ VPLPAGIYNL DDLKALGQRQ GWCPYFLARY SILHANVVVY SYHYLLDPKI ADLVSKELAR KAVVVFDEAH NIDNVCIDSM SVNLTRRTLD RCQANLDTLQ KTVLRIKETD EQRLRDEYRR LVEGLREASV ARETDAHLAN PVLPDEVLQE AVPGSIRTAE HFLGFLRRLL EFVKWRLRVQ HVVQESPPAF LSSLAQRVCI QRKPLRFCAE RLRSLLHTLE IADLADFSPL TLLANFATLV STYAKGFTII IEPFDDRTPT IANPVLHFSC MDASLAIKPV FERFQSVIIT SGTLSPLDIY PKILDFHPVT MATFTMTLAR VCLCPMIIGR GNDQVAISSK FETREDIAVI RNYGNLLLEM SAVVPDGIVA FFTSYQYMES TVASWYEQGI LENIQRNKLL FIETQDGAET SVALEKYQEA CENGRGAILL SVARGKVSEG IDFVHHYGRA VIMFGVPYVY TQSRILKARL EYLRDQFQIR ENDFLTFDAM RHAAQCVGRA IRGKTDYGLM VFADKRFARA DKRGKLPRWI QEHLTDANLN LTVDEGVQVA KYFLRQMAQP FHQEDQLGLS LLSLEQLESE EMLRRIEQIA QQL // ID H0WX60_OTOGA Unreviewed; 763 AA. AC H0WX60; DT 22-FEB-2012, integrated into UniProtKB/TrEMBL. DT 22-FEB-2012, sequence version 1. DT 11-MAY-2016, entry version 28. DE SubName: Full=Uncharacterized protein {ECO:0000313|Ensembl:ENSOGAP00000007018}; GN Name=ERCC2 {ECO:0000313|Ensembl:ENSOGAP00000007018}; OS Otolemur garnettii (Small-eared galago) (Garnett's greater bushbaby). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; OC Lorisiformes; Galagidae; Otolemur. OX NCBI_TaxID=30611 {ECO:0000313|Ensembl:ENSOGAP00000007018, ECO:0000313|Proteomes:UP000005225}; RN [1] {ECO:0000313|Ensembl:ENSOGAP00000007018} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RG The Broad Institute Genome Sequencing Platform; RA Di Palma F., Johnson J., Lander E.S., Lindblad-Toh K., Jaffe D.B., RA Gnerre S., MacCallum I., Przybylski D., Ribeiro F.J., Burton J.N., RA Walker B.J., Sharpe T., Hall G.; RT "Version 3 of the genome sequence of Otolemur garnettii (Bushbaby)."; RL Submitted (MAR-2011) to the EMBL/GenBank/DDBJ databases. RN [2] {ECO:0000313|Ensembl:ENSOGAP00000007018} RP IDENTIFICATION. RG Ensembl; RL Submitted (JAN-2012) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an Ensembl CC automatic analysis pipeline and should be considered as CC preliminary data. {ECO:0000313|Ensembl:ENSOGAP00000007018}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AAQR03153683; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AAQR03153684; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AAQR03153685; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AAQR03153686; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR STRING; 30611.ENSOGAP00000007018; -. DR Ensembl; ENSOGAT00000007841; ENSOGAP00000007018; ENSOGAG00000007834. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR GeneTree; ENSGT00550000075092; -. DR InParanoid; H0WX60; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG70W3CM; -. DR TreeFam; TF101232; -. DR Proteomes; UP000005225; Unassembled WGS sequence. DR GO; GO:0019907; C:cyclin-dependent protein kinase activating kinase holoenzyme complex; IEA:Ensembl. DR GO; GO:0005737; C:cytoplasm; IEA:Ensembl. DR GO; GO:0005675; C:holo TFIIH complex; IEA:Ensembl. DR GO; GO:0071817; C:MMXD complex; IEA:Ensembl. DR GO; GO:0043139; F:5'-3' DNA helicase activity; IEA:Ensembl. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0008353; F:RNA polymerase II carboxy-terminal domain kinase activity; IEA:Ensembl. DR GO; GO:0007568; P:aging; IEA:Ensembl. DR GO; GO:0006915; P:apoptotic process; IEA:Ensembl. DR GO; GO:0030282; P:bone mineralization; IEA:Ensembl. DR GO; GO:0008283; P:cell proliferation; IEA:Ensembl. DR GO; GO:0032289; P:central nervous system myelin formation; IEA:Ensembl. DR GO; GO:0007059; P:chromosome segregation; IEA:Ensembl. DR GO; GO:0040016; P:embryonic cleavage; IEA:Ensembl. DR GO; GO:0043249; P:erythrocyte maturation; IEA:Ensembl. DR GO; GO:0030198; P:extracellular matrix organization; IEA:Ensembl. DR GO; GO:0035315; P:hair cell differentiation; IEA:Ensembl. DR GO; GO:0048820; P:hair follicle maturation; IEA:Ensembl. DR GO; GO:0060218; P:hematopoietic stem cell differentiation; IEA:Ensembl. DR GO; GO:0001701; P:in utero embryonic development; IEA:Ensembl. DR GO; GO:0035264; P:multicellular organism growth; IEA:Ensembl. DR GO; GO:0033683; P:nucleotide-excision repair, DNA incision; IEA:Ensembl. DR GO; GO:0043388; P:positive regulation of DNA binding; IEA:Ensembl. DR GO; GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IEA:Ensembl. DR GO; GO:0009791; P:post-embryonic development; IEA:Ensembl. DR GO; GO:1901990; P:regulation of mitotic cell cycle phase transition; IEA:Ensembl. DR GO; GO:0006979; P:response to oxidative stress; IEA:Ensembl. DR GO; GO:0021510; P:spinal cord development; IEA:Ensembl. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:Ensembl. DR GO; GO:0006283; P:transcription-coupled nucleotide-excision repair; IEA:Ensembl. DR GO; GO:0009650; P:UV protection; IEA:Ensembl. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000005225}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000005225}. FT DOMAIN 7 283 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 77 100 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 763 AA; 87273 MW; ED62310F29C28242 CRC64; MKLNVDGLLV YFPYDYIYPE QFSYMRELKR TLDAKGHGVL EMPSGTGKTV SLLALIIAYQ RAYPLEVTKL IYCSRTVPEI EKVIEELRKL LNFYEKQEGE KLPFLGLALS SRKNLCIHPE VTPLRFGKDV DGKCHSLTAS YVRAQYQQDT SLPHCRFYEE FDAHGRQVPL PAGIYNLDDL KTLGRRQGWC PYFLARYSIL HANVVVYSYH YLLDPKIADL VSKELARKAV VVFDEAHNID NVCIDSMSVN LTRRILDRCQ GNLETLQKTV LRIKETDEQR LRDEYRRLVE GLREASAARE TDAHLANPVL PDEVLQEAVP GSIRTAEHFL GFLRRLLEYV KWRLRVQHVV QESPPAFLSG LAQRVCIQRK PLRFCAERLR SLLHTLEITD LADFSPLTLL ANFATLVSTY AKGFTIIIEP FDDRTPTIAN PILHFSCMDA SLAIKPVFER FQSVIITSGT LSPLDIYPKI LDFHPVTMAT FTMTLARVCL CPMIIGRGND QVAISSKFES REDIAVIRNY GNLLLEMSAV VPDGIVAFFT SYQYMESTVA SWYEQGILEN IQRNKLLFIE TQDGAETSVA LEKYQEACEN GRGAILLSVA RGKVSEGIDF AHLVHHYGRA VIMFGVPYVY TQSRILKARL EYLRDQFQIR ENDFLTFDAM RHAAQCVGRA IRGKTDYGLM VFADKRFARV DKRGKLPRWI QEHLTDANLN LTVDEGVQVA KYFLRQMAQP FHREDQLGLS LLSLEQLESE ETLQRIEQIA QQL // ID H1V3M3_COLHI Unreviewed; 775 AA. AC H1V3M3; DT 21-MAR-2012, integrated into UniProtKB/TrEMBL. DT 21-MAR-2012, sequence version 1. DT 11-MAY-2016, entry version 26. DE SubName: Full=DNA repair helicase rad15 {ECO:0000313|EMBL:CCF34825.1}; GN ORFNames=CH063_06741 {ECO:0000313|EMBL:CCF34825.1}; OS Colletotrichum higginsianum (strain IMI 349063) (Crucifer anthracnose OS fungus). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; OC Sordariomycetes; Hypocreomycetidae; Glomerellales; Glomerellaceae; OC Colletotrichum. OX NCBI_TaxID=759273 {ECO:0000313|Proteomes:UP000007174}; RN [1] {ECO:0000313|Proteomes:UP000007174} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=IMI 349063 {ECO:0000313|Proteomes:UP000007174}; RX PubMed=22885923; DOI=10.1038/ng.2372; RA O'Connell R.J., Thon M.R., Hacquard S., Amyotte S.G., Kleemann J., RA Torres M.F., Damm U., Buiate E.A., Epstein L., Alkan N., RA Altmueller J., Alvarado-Balderrama L., Bauser C.A., Becker C., RA Birren B.W., Chen Z., Choi J., Crouch J.A., Duvick J.P., Farman M.A., RA Gan P., Heiman D., Henrissat B., Howard R.J., Kabbage M., Koch C., RA Kracher B., Kubo Y., Law A.D., Lebrun M.-H., Lee Y.-H., Miyara I., RA Moore N., Neumann U., Nordstroem K., Panaccione D.G., Panstruga R., RA Place M., Proctor R.H., Prusky D., Rech G., Reinhardt R., RA Rollins J.A., Rounsley S., Schardl C.L., Schwartz D.C., Shenoy N., RA Shirasu K., Sikhakolli U.R., Stueber K., Sukno S.A., Sweigard J.A., RA Takano Y., Takahara H., Trail F., van der Does H.C., Voll L.M., RA Will I., Young S., Zeng Q., Zhang J., Zhou S., Dickman M.B., RA Schulze-Lefert P., Ver Loren van Themaat E., Ma L.-J., RA Vaillancourt L.J.; RT "Lifestyle transitions in plant pathogenic Colletotrichum fungi RT deciphered by genome and transcriptome analyses."; RL Nat. Genet. 44:1060-1065(2012). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:CCF34825.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CACQ02001289; CCF34825.1; -; Genomic_DNA. DR EnsemblFungi; CCF34825; CCF34825; CH063_06741. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000007174; Unassembled WGS sequence. DR GO; GO:0000439; C:core TFIIH complex; IEA:EnsemblFungi. DR GO; GO:0005675; C:holo TFIIH complex; IEA:EnsemblFungi. DR GO; GO:0000112; C:nucleotide-excision repair factor 3 complex; IEA:EnsemblFungi. DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:EnsemblFungi. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0043141; F:ATP-dependent 5'-3' DNA helicase activity; IEA:EnsemblFungi. DR GO; GO:0003684; F:damaged DNA binding; IEA:EnsemblFungi. DR GO; GO:0033683; P:nucleotide-excision repair, DNA incision; IEA:EnsemblFungi. DR GO; GO:0070816; P:phosphorylation of RNA polymerase II C-terminal domain; IEA:EnsemblFungi. DR GO; GO:0045951; P:positive regulation of mitotic recombination; IEA:EnsemblFungi. DR GO; GO:0010525; P:regulation of transposition, RNA-mediated; IEA:EnsemblFungi. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:EnsemblFungi. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CCF34825.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000007174}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:CCF34825.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CCF34825.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CCF34825.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000007174}. FT DOMAIN 1 267 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 238 280 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 775 AA; 88494 MW; 9D78FB39599F5679 CRC64; MKFFIEYMCD LKKTLDAGGH CVLEMPSGTG KTVSLLSLIV AYQQHNPEHR KLIYCSRTMS EIEKALAELK ALMKYRAQEL GEEEEFRGLG LTSRKNLCLH PSVKQEKSGA IVDARCRSLT AGFVKEKKDR GENVDVCVYH DNLDLLEPHN LIPNGVWTFD GLLKYGEQHK QCPYFTARRM MQFCNVIIYS YHYLLDPKIA ERVSRELSKD CIVVFDEAHN IDNVCIESLS TDITEDSLRK ATRGAQNLER KIAEMRDTDQ EQLQNEYQKL VEGLRGADEA RQEDAFMSNP ALPDDLLKEA VPGNIRRAEH FVSFLKRFIE YLKTRMKVRH TISETPPSFL AHLREYTFIE KKPLRFCAER LTSLVRTLEL TNIEDYQPLQ EVATFATLVA TYEKGFLLIL EPFESETAEV PNPVLHFTCL DAAIAIKPVF DRFSSVIITS GTMSPLEMYP KMLGFSTVVQ ESYSMTLARR SFLPMIVTRG SDQSSISTSF QVRNEPSVVR NYGTLLTEFA KITPDGMVVF FPSYLYMESI ISMWQGMNIL EEVWKYKLIL VETPDAQETS LALETYRTAC CNGRGAVLLC VARGKVSEGI DFDHQYGRTV LCIGVPFQYT ESRILKARLE FLRETYRIRE NDFLSFDAMR HAAQCLGRVL RGKDDYGIMV LADRRFQKKR AQLPKWINQG LLDADTNVST DMAVSSARRF LKQMAQPFRA KDQEGVSTWS YEDLMRHKEK MDLERIQELE EAGGGGGDGY GADGGDEYGM DDDLDNDLME IDDGF // ID H1XU08_9BACT Unreviewed; 804 AA. AC H1XU08; DT 21-MAR-2012, integrated into UniProtKB/TrEMBL. DT 21-MAR-2012, sequence version 1. DT 11-MAY-2016, entry version 20. DE SubName: Full=DEAD_2 domain protein {ECO:0000313|EMBL:EHO40451.1}; GN ORFNames=Calab_0813 {ECO:0000313|EMBL:EHO40451.1}; OS Caldithrix abyssi DSM 13497. OC Bacteria; Caldithrix. OX NCBI_TaxID=880073 {ECO:0000313|EMBL:EHO40451.1, ECO:0000313|Proteomes:UP000004671}; RN [1] {ECO:0000313|EMBL:EHO40451.1, ECO:0000313|Proteomes:UP000004671} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=DSM 13497 {ECO:0000313|EMBL:EHO40451.1, RC ECO:0000313|Proteomes:UP000004671}; RG US DOE Joint Genome Institute (JGI-PGF); RA Lucas S., Han J., Lapidus A., Bruce D., Goodwin L., Pitluck S., RA Peters L., Kyrpides N., Mavromatis K., Ivanova N., Mikhailova N., RA Chertkov O., Detter J.C., Tapia R., Han C., Land M., Hauser L., RA Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Spring S., RA Brambilla E., Klenk H.-P., Eisen J.A.; RT "The permanent draft genome of Caldithrix abyssi DSM 13497."; RL Submitted (SEP-2011) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CM001402; EHO40451.1; -; Genomic_DNA. DR RefSeq; WP_006927436.1; NZ_CM001402.1. DR EnsemblBacteria; EHO40451; EHO40451; Calab_0813. DR Proteomes; UP000004671; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 4. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR014001; Helicase_ATP-bd. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF00270; DEAD; 1. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00487; DEXDc; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 3. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW Complete proteome {ECO:0000313|Proteomes:UP000004671}; KW Reference proteome {ECO:0000313|Proteomes:UP000004671}. FT DOMAIN 191 459 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 804 AA; 93388 MW; 8A4C6802B58343D4 CRC64; MAIRIENNDI YLAVRDLVHY PPDQPLISSF PLPQRGVLGQ KAHRRVQESK QKHFGLFHRE FTVNRAYAYR DFTFHIQGRI DGVYQLSDRM EIEEIKSVIL RPAEFKRLQI ERYPHFSEQL LFYAYLLQDS FDGLEVQTFL ILVNLINNQQ RSFPIVYNRM QVERMLQVRF EEIVQRILDE RQKLAERQAL IRKIQFDLPE ERPQQQMMMD EVRQALESGA HLMASAPTGT GKTAAALYPA IRHAYLNNKK IFFITSKTTQ QRIAVETVLP LIAQGLPLKA MVITASEKMC LNDVFFCHPS FCPYIKDYNQ RLLSSNLLPN LLANDFIDPA AISSAAAGAQ LCPFEVSMDL LAHVDLIIGD YNYVFDPAAQ LRRLFMSKDF SDWILIIDEA HNLYERGMNY LSPQIERRKL AELIAFTAQQ RARVYRDLTS GLKEFKSMLD QLQREGELNY EHQQYFLTQL DLKQLDEAFK QFEAAFIRYL IYKIRAKKLI VDDPLEAIFY QLRRFVRVAH IEDRAFVAFF NAMNDGVLHI QCCDPSHYLG EIIDRFHGVI AMSATLDPME FYRNLLGFSA VRTRFLQLDS PFPLENRKLI IVPGISTRYK DRLRNAPKIA EIIRNTISVK PGNYLVFFPS FEFLQLVNVF LNQIPGEKII QKPGMKAKER DETLDKLRAG QAPHLLMAVM GGIFSEGVDF SGNMAIGVIV IGPALPQVSF ERELLRQYYE ETYHMGEEYA YIYPGMNKVI QAVGRLIRSA TDKGVVLLIG DRFADERFNL LLPDYWFRKE DDVEITSDYL KALKNFWQKM DRAD // ID H1Z405_9EURY Unreviewed; 665 AA. AC H1Z405; DT 21-MAR-2012, integrated into UniProtKB/TrEMBL. DT 21-MAR-2012, sequence version 1. DT 11-MAY-2016, entry version 20. DE SubName: Full=DEAD_2 domain protein {ECO:0000313|EMBL:EHQ35684.1}; GN ORFNames=Metlim_1583 {ECO:0000313|EMBL:EHQ35684.1}; OS Methanoplanus limicola DSM 2279. OC Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; OC Methanomicrobiaceae; Methanoplanus. OX NCBI_TaxID=937775 {ECO:0000313|EMBL:EHQ35684.1, ECO:0000313|Proteomes:UP000005741}; RN [1] {ECO:0000313|EMBL:EHQ35684.1, ECO:0000313|Proteomes:UP000005741} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=DSM 2279 {ECO:0000313|EMBL:EHQ35684.1, RC ECO:0000313|Proteomes:UP000005741}; RG US DOE Joint Genome Institute (JGI-PGF); RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., RA Tice H., Bruce D., Goodwin L., Pitluck S., Peters L., Mikhailova N., RA Lu M., Kyrpides N., Mavromatis K., Ivanova N., Markowitz V., RA Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Wirth R., RA Brambilla E.-M., Klenk H.-P., Eisen J.A.; RT "The Improved High-Quality Draft genome of Methanoplanus limicola DSM RT 2279."; RL Submitted (OCT-2011) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CM001436; EHQ35684.1; -; Genomic_DNA. DR RefSeq; WP_004077440.1; NZ_CM001436.1. DR EnsemblBacteria; EHQ35684; EHQ35684; Metlim_1583. DR Proteomes; UP000005741; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 1.10.357.10; -; 1. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR015893; Tet_transcr_reg_TetR-like_C. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 2. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW Complete proteome {ECO:0000313|Proteomes:UP000005741}; KW Reference proteome {ECO:0000313|Proteomes:UP000005741}. FT DOMAIN 3 300 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 665 AA; 75635 MW; A6F196B1903D8754 CRC64; MGNIEDWFPY ESFRPNQETM LNTAAEAARE NKICLIDAPT GSGKSSIISA MLANANGRKI VVAVRTVSQL NIFIREIELI KRKKRVKAAY LIGKRNMCPM TGEGDIYHLC EGLKSFSSSI MRDRAQKGSL VPANDAVIKN QIKRQDPDRP LLCPYYIKSK VFVENDGMKM IPSNGLRAKG EEVSKSLVNP DRIKTLCNEI CPYEVMLQAA RDADIILLNF HHLFNETIRE QMYLSIGIEE NNTMLLIDEA HNCSDTVQSI QTISISEKTL DHAQNELTHM KSRIKGVEAV QGMLPRVRKF MDGLRRSVKK EDYFDPAMFS RFILNESLYS KMEDIYDDLN RIYEAIKEKK IQEGDFKEIP LERVMEFFFR IIQATKDPAF LTIYKKNDNM ISLEVRNIDP ASTLKEIAKN HSSCIMISGT LSPVESFKKL YFEDTPAVTL SLPNSFPKKN RAIYCSKDVT STFSKRKDRD NLERIHRYIQ EFAKVKGNLA VYFPSYDMLN NIAVDIPQKI NGKEVFIESP EAQVANRDLR KFLSLPETGK SGIIFGVCGG KWSEGLDYRG DLLNGAIVIG LPLAPYNDVR KMVIDYFRSK FGPEGEFISY TLPAINKALQ ALGRVLRTPD DTGVLLIGEA RFLESGVKKG LPPWMQDEMV VCDISQFSKD MTRWR // ID H2AQA4_KAZAF Unreviewed; 779 AA. AC H2AQA4; DT 21-MAR-2012, integrated into UniProtKB/TrEMBL. DT 21-MAR-2012, sequence version 1. DT 11-MAY-2016, entry version 30. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CCF56554.1}; GN Name=KAFR0B02570 {ECO:0000313|EMBL:CCF56554.1}; GN ORFNames=KAFR_0B02570 {ECO:0000313|EMBL:CCF56554.1}; OS Kazachstania africana (strain ATCC 22294 / BCRC 22015 / CBS 2517 / OS CECT 1963 / NBRC 1671 / NRRL Y-8276) (Yeast) (Kluyveromyces OS africanus). OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; OC Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Kazachstania. OX NCBI_TaxID=1071382 {ECO:0000313|EMBL:CCF56554.1, ECO:0000313|Proteomes:UP000005220}; RN [1] {ECO:0000313|EMBL:CCF56554.1, ECO:0000313|Proteomes:UP000005220} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 22294 / BCRC 22015 / CBS 2517 / CECT 1963 / NBRC 1671 / RC NRRL Y-8276 {ECO:0000313|Proteomes:UP000005220}; RX PubMed=22123960; DOI=10.1073/pnas.1112808108; RA Gordon J.L., Armisen D., Proux-Wera E., OhEigeartaigh S.S., RA Byrne K.P., Wolfe K.H.; RT "Evolutionary erosion of yeast sex chromosomes by mating-type RT switching accidents."; RL Proc. Natl. Acad. Sci. U.S.A. 108:20024-20029(2011). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; HE650822; CCF56554.1; -; Genomic_DNA. DR RefSeq; XP_003955689.1; XM_003955640.1. DR EnsemblFungi; CCF56554; CCF56554; KAFR_0B02570. DR GeneID; 13882935; -. DR KEGG; kaf:KAFR_0B02570; -. DR InParanoid; H2AQA4; -. DR KO; K10844; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000005220; Chromosome 2. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000005220}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000005220}. FT DOMAIN 7 286 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 779 AA; 89385 MW; 5FE03D55E41F7D69 CRC64; MKFFIDDLPV LFPYPKIYPE QYQYMCDIKK TLDAGGNSIL EMPSGTGKTV SLLSLSVAYQ MHYPEHRKII YCSRTMSEIE KTLVELENLM DYRSRELGYV EEFRGLGLTS RKNLCLHPVV SKERKGTVVD EKCRRLTNGV NKRKLQENPD ATDAELCEYH ENLYDMEVEN YLPKGVFSFE KLIKYAEEKT ICPYFIVRRM ISLCNIIVYS YHYLLDPKIA ERVSNEVSKD SIVIFDEAHN IDNVCIESLS LDLTNDVLRR ATKGANALEG RIEEVRKADS KKLQDEYDKL VQGLHADDIL TVAEEPFVET PVLSQDLLKE AIPGNIRRAE HFISFLKRLI EYLKTRMKVL HVISETPKSF LQHLKQLTFI DRKPLRFCSE RLSLLVRTLE VTEVEDFTAL KDIATFATLI STYEDGFTLI IEPYEIENAA VPNPIMRFSC LDASIAIKPV FEKFSSVIIT SGTISPLDMY PRMLNFETIL QKSYSMTLDK KSFLPMIITK GSDQVAISSR FEIRNDPSIV RNYGSMLVEF AKITPDGMVV FFPSYLYMES IVSMWQTMGI LDEVWKHKLI LVETPDAQET SLALETYRKA CSNGRGAILL SVARGKVSEG IDFDHHYGRT VLMIGIPFQY TESRILKARL EFLRENYQIR ENDFLSFDAM RHAAQCLGRV LRGKDDYGVM VLADRRFSRK KNQLPKWIAQ GLSDADLNLS TDMAISNTKQ FLRTMAQPTN PKDQEGVSVW SLDDLTKFQQ SHQQKTNNGN QMANIDKENV DQEGDTVMG // ID H2L7Y0_ORYLA Unreviewed; 759 AA. AC H2L7Y0; DT 21-MAR-2012, integrated into UniProtKB/TrEMBL. DT 21-MAR-2012, sequence version 1. DT 11-MAY-2016, entry version 31. DE SubName: Full=Uncharacterized protein {ECO:0000313|Ensembl:ENSORLP00000001947}; OS Oryzias latipes (Japanese rice fish) (Japanese killifish). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; OC Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; OC Oryziinae; Oryzias. OX NCBI_TaxID=8090 {ECO:0000313|Ensembl:ENSORLP00000001947, ECO:0000313|Proteomes:UP000001038}; RN [1] {ECO:0000313|Ensembl:ENSORLP00000001947, ECO:0000313|Proteomes:UP000001038} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Hd-rR {ECO:0000313|Ensembl:ENSORLP00000001947, RC ECO:0000313|Proteomes:UP000001038}; RX PubMed=17554307; DOI=10.1038/nature05846; RA Kasahara M., Naruse K., Sasaki S., Nakatani Y., Qu W., Ahsan B., RA Yamada T., Nagayasu Y., Doi K., Kasai Y., Jindo T., Kobayashi D., RA Shimada A., Toyoda A., Kuroki Y., Fujiyama A., Sasaki T., Shimizu A., RA Asakawa S., Shimizu N., Hashimoto S., Yang J., Lee Y., Matsushima K., RA Sugano S., Sakaizumi M., Narita T., Ohishi K., Haga S., Ohta F., RA Nomoto H., Nogata K., Morishita T., Endo T., Shin-I T., Takeda H., RA Morishita S., Kohara Y.; RT "The medaka draft genome and insights into vertebrate genome RT evolution."; RL Nature 447:714-719(2007). RN [2] {ECO:0000313|Ensembl:ENSORLP00000001947} RP IDENTIFICATION. RC STRAIN=Hd-rR {ECO:0000313|Ensembl:ENSORLP00000001947}; RG Ensembl; RL Submitted (FEB-2012) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an Ensembl CC automatic analysis pipeline and should be considered as CC preliminary data. {ECO:0000313|Ensembl:ENSORLP00000001947}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; BAAF04010349; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; BAAF04010350; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; BAAF04010351; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR STRING; 8090.ENSORLP00000001947; -. DR Ensembl; ENSORLT00000001948; ENSORLP00000001947; ENSORLG00000001570. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR GeneTree; ENSGT00550000075092; -. DR InParanoid; H2L7Y0; -. DR OMA; KAMGRRQ; -. DR OrthoDB; EOG70W3CM; -. DR TreeFam; TF101232; -. DR Proteomes; UP000001038; Chromosome 13. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000001038}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000001038}. FT DOMAIN 7 285 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 759 AA; 86431 MW; 34C871C4EBC0DE0C CRC64; MKLNIEGLLV YFPYDYIYPE QYSYMLELKR TLDAKGHGVL EMPSGTGKTI SLLSLIVAYQ KAFPLDVTKL IYCSRTVPEI EKVVEELRKL MEFYAKETGE VNNFLALALS SRKNLCIHPE VSSLRFGKEV DGKCHSLTAS YIRAQRHSNP DQPVCRFYEE FDAVGRQVPL PAGIYNLDDL KDFGRRKGWC PYYLARYSIL HANIVVYSYH YLLDPKIADL VSKELAKKSV VVFDEAHNID NVCIDSMSVN ITRRTLDKAQ LSPLIRFVLI CRIKDTDAAK LREEYRRLVE GLKEANVARE TDVYLANPVL PDEILQEAVP GSIRTAEHFL GFLRRFLEYL KSRLRVHHVV QESAPQFLKD IFEKVCIDRK PLRFCAERLQ SLLRTLEIAD IADFSAVTLI SNFATLVSTY SEGFTIIIEP FDDRTPTIAN PVLHFSCMDP SIAIKPVFQR FQSVVITSGT LSPLDIYPKI LDFRPVTMAS FTMTLARTCL CPLIVGRGND QVALSSKFET REDFAVIRNY GNLLLEMSAI VPDGIVAFFT SYVYMENIVA SWYEQGILEN IQRNKLIFIE TQDAAETSMA LEKYQEACEN GRGAILLSVA RGKVSEGIDF VHHFGRAVIM FGVPYVYTQS RILKVRTQNP VGTTLFHSLE KDDLCQNSKS EPEAKFVNSF SSQKLNIKKV INLQPGFKLL LSHFDDRKEN VQKKTTKEQK MFKKGLKYYC NKTSAVPLQE DQLGLSLLTL EQLQSEDMLK KIAQIAHQA // ID H2NZ81_PONAB Unreviewed; 729 AA. AC H2NZ81; DT 21-MAR-2012, integrated into UniProtKB/TrEMBL. DT 21-MAR-2012, sequence version 1. DT 11-MAY-2016, entry version 30. DE SubName: Full=Uncharacterized protein {ECO:0000313|Ensembl:ENSPPYP00000011316}; GN Name=ERCC2 {ECO:0000313|Ensembl:ENSPPYP00000011316}; OS Pongo abelii (Sumatran orangutan) (Pongo pygmaeus abelii). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; OC Catarrhini; Hominidae; Pongo. OX NCBI_TaxID=9601 {ECO:0000313|Ensembl:ENSPPYP00000011316, ECO:0000313|Proteomes:UP000001595}; RN [1] {ECO:0000313|Ensembl:ENSPPYP00000011316, ECO:0000313|Proteomes:UP000001595} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RA Wilson R.K., Mardis E.; RT "A 6x draft sequence assembly of the Pongo pygmaeus abelii genome."; RL Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases. RN [2] {ECO:0000313|Ensembl:ENSPPYP00000011316} RP IDENTIFICATION. RG Ensembl; RL Submitted (FEB-2012) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an Ensembl CC automatic analysis pipeline and should be considered as CC preliminary data. {ECO:0000313|Ensembl:ENSPPYP00000011316}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ABGA01048964; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; ABGA01048965; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; ABGA01124718; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; ABGA01124719; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; ABGA01124720; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; ABGA01124721; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; ABGA01124722; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR STRING; 9601.ENSPPYP00000011316; -. DR Ensembl; ENSPPYT00000011757; ENSPPYP00000011316; ENSPPYG00000010117. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR GeneTree; ENSGT00550000075092; -. DR InParanoid; H2NZ81; -. DR OMA; KAMGRRQ; -. DR OrthoDB; EOG70W3CM; -. DR TreeFam; TF101232; -. DR Proteomes; UP000001595; Chromosome 19. DR GO; GO:0019907; C:cyclin-dependent protein kinase activating kinase holoenzyme complex; IEA:Ensembl. DR GO; GO:0005737; C:cytoplasm; IEA:Ensembl. DR GO; GO:0005675; C:holo TFIIH complex; IEA:Ensembl. DR GO; GO:0071817; C:MMXD complex; IEA:Ensembl. DR GO; GO:0043139; F:5'-3' DNA helicase activity; IEA:Ensembl. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0008353; F:RNA polymerase II carboxy-terminal domain kinase activity; IEA:Ensembl. DR GO; GO:0007568; P:aging; IEA:Ensembl. DR GO; GO:0006915; P:apoptotic process; IEA:Ensembl. DR GO; GO:0030282; P:bone mineralization; IEA:Ensembl. DR GO; GO:0008283; P:cell proliferation; IEA:Ensembl. DR GO; GO:0032289; P:central nervous system myelin formation; IEA:Ensembl. DR GO; GO:0007059; P:chromosome segregation; IEA:Ensembl. DR GO; GO:0040016; P:embryonic cleavage; IEA:Ensembl. DR GO; GO:0043249; P:erythrocyte maturation; IEA:Ensembl. DR GO; GO:0030198; P:extracellular matrix organization; IEA:Ensembl. DR GO; GO:0035315; P:hair cell differentiation; IEA:Ensembl. DR GO; GO:0048820; P:hair follicle maturation; IEA:Ensembl. DR GO; GO:0060218; P:hematopoietic stem cell differentiation; IEA:Ensembl. DR GO; GO:0001701; P:in utero embryonic development; IEA:Ensembl. DR GO; GO:0035264; P:multicellular organism growth; IEA:Ensembl. DR GO; GO:0033683; P:nucleotide-excision repair, DNA incision; IEA:Ensembl. DR GO; GO:0043388; P:positive regulation of DNA binding; IEA:Ensembl. DR GO; GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IEA:Ensembl. DR GO; GO:0009791; P:post-embryonic development; IEA:Ensembl. DR GO; GO:1901990; P:regulation of mitotic cell cycle phase transition; IEA:Ensembl. DR GO; GO:0006979; P:response to oxidative stress; IEA:Ensembl. DR GO; GO:0021510; P:spinal cord development; IEA:Ensembl. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:Ensembl. DR GO; GO:0006283; P:transcription-coupled nucleotide-excision repair; IEA:Ensembl. DR GO; GO:0009650; P:UV protection; IEA:Ensembl. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000001595}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000001595}. FT DOMAIN 1 253 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 47 70 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 729 AA; 83159 MW; 16E73A66C7A4968A CRC64; MKLNVGHGVL EMPSGTGKTV SLLALIMAYQ RAYPLEVTKL IYCSRTVPEI EKVIEELRKL LNFYEKQEGE KLQFLGLALS SRKNLCIHPE VTPLRFGKDV DGKCHSLTAS YVRAQYQHDT SLPHCRFYEE FDAHGREVPL SAGIYNLDDL KALGRRQGWC PYFLARYSIL HANVVVYSYH YLLDPKIADL VSKELARKAV VVFDEAHNID NVCIDSMSVN LTRRTLDRCQ GNLETLQKTV LRIKETDEQR LRDEYRRLVE GLREASVARE TDAHLANPVL PDEVLQEAVP GSIRTAEHFL GFLRRLLEYV KWRLRVQHVV QESPPAFLSG LAQRVCIQRK PLRFCAERLR SLLYTLEITD LADFSPLTLL ANFATLVSTY AKGFTIIIEP FDDRTPTIAN PILHFSCMDA SLAIKPVFER FQSVIITSGT LSPLDIYPKI LDFHPVTMAT FTMTLARVCL CPMIIGRGND QVAISSKFET REDIAVIRNY GNLLLEMSAV VPDGIVAFFT SYQYMESTVA SWYEQGILEN IQRNKLLFIE TQDGAETSVA LEKYQEACEN GRGAILLSVA RGKVSEGIDF VHHYGRAVIM FGVPYVYTQS RILKARLKYL RDQFQIREND FLTLDTMRHA AQVGRAIRGK TDYGLMVFAD KRFARGDKRG KLPRWIQEHL TDANLNLTVD EGVQVAKYFL RQMAQPFHRE DQLGLSLLSL EQLESEETLQ RIEQIAQQL // ID H2T012_TAKRU Unreviewed; 760 AA. AC H2T012; DT 21-MAR-2012, integrated into UniProtKB/TrEMBL. DT 21-MAR-2012, sequence version 1. DT 11-MAY-2016, entry version 34. DE SubName: Full=Uncharacterized protein {ECO:0000313|Ensembl:ENSTRUP00000018000}; GN Name=ercc2 {ECO:0000313|Ensembl:ENSTRUP00000018000}; OS Takifugu rubripes (Japanese pufferfish) (Fugu rubripes). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; OC Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; OC Takifugu. OX NCBI_TaxID=31033 {ECO:0000313|Ensembl:ENSTRUP00000018000, ECO:0000313|Proteomes:UP000005226}; RN [1] {ECO:0000313|Ensembl:ENSTRUP00000018000} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RX PubMed=21551351; RA Kai W., Kikuchi K., Tohari S., Chew A.K., Tay A., Fujiwara A., RA Hosoya S., Suetake H., Naruse K., Brenner S., Suzuki Y., Venkatesh B.; RT "Integration of the genetic map and genome assembly of fugu RT facilitates insights into distinct features of genome evolution in RT teleosts and mammals."; RL Genome Biol. Evol. 3:424-442(2011). RN [2] {ECO:0000313|Ensembl:ENSTRUP00000018000} RP IDENTIFICATION. RG Ensembl; RL Submitted (FEB-2012) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an Ensembl CC automatic analysis pipeline and should be considered as CC preliminary data. {ECO:0000313|Ensembl:ENSTRUP00000018000}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR RefSeq; XP_003968746.1; XM_003968697.2. DR STRING; 31033.ENSTRUP00000018000; -. DR Ensembl; ENSTRUT00000018074; ENSTRUP00000018000; ENSTRUG00000007303. DR GeneID; 101077267; -. DR KEGG; tru:101077267; -. DR CTD; 2068; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR GeneTree; ENSGT00550000075092; -. DR InParanoid; H2T012; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG70W3CM; -. DR TreeFam; TF101232; -. DR Proteomes; UP000005226; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 2. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000005226}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000005226}. FT DOMAIN 7 283 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 760 AA; 86801 MW; E44B185C1EFFD058 CRC64; MRLNIDGLLV YFPYDYIYPE QYSYMLELKR TLDAKGHGVL EMPSGTGKTI SLLSLIVAYQ KAFPLEVTKL IYCSRTVPEI EKVVEELRKL LEYHAKQTGQ SNNFLALALS SRKNLCIHPE VSALRFGKEV DGKCHSLTAS YIRAQRHSDP NVPVCRYFED FDAVGRQVPL PAGIYNLDDL KDFGRRKGWC PYYLARYSIL HANIVVYSYH YLLDPKIADL VSKELAKKSV VVFDEAHNID NVCIDSMSVN ITRRTLDRCQ GNVDTLQKTI HKIKDTDAAK LKEEYRRLVE GLKEANIARE TDVYLSNPVL PDEILREAVP GTIRTAEHFV GFLKRFLEYL KSRLRVQHVV QESTPQFLKD IFEKVCIDRK PLRFCAERLQ SLLRTLEIAD IADFSAVTLI ANFATLVSTY SQGFTIIIEP FEDRTPTIAN PVLHFSCMDP SIAIKPVFQR FQSVVITSGT LSPLDIYPKI LDFRPVTMAS FTMTLARTCL CPLIIGRGND QVALSSKFET REDFAVIRNY GNLLLEMSAI VPDGIVAFFT SYVYMENIVA SWYEQGILEN IQKNKLIFIE TPDAAETSMA LEKYQEACEN GRGAILLSVA RGKVSEGIDF VHHFGRAVIM FGVPYVYTQS RILKARLEYL RDHFQIREND FLTFDAMRHA AQCVGRAIRG KTDYGLMIFA DKRYARADKR GKLPRWIQEH ISDGSLNLTI DETIQLSKHF LRQMAQPFRQ EDQLGLSLLT LEQLESEEML QKISQIAQQT // ID H2T013_TAKRU Unreviewed; 739 AA. AC H2T013; DT 21-MAR-2012, integrated into UniProtKB/TrEMBL. DT 21-MAR-2012, sequence version 1. DT 11-MAY-2016, entry version 26. DE SubName: Full=Uncharacterized protein {ECO:0000313|Ensembl:ENSTRUP00000018001}; GN Name=ercc2 {ECO:0000313|Ensembl:ENSTRUP00000018001}; OS Takifugu rubripes (Japanese pufferfish) (Fugu rubripes). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; OC Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; OC Takifugu. OX NCBI_TaxID=31033 {ECO:0000313|Ensembl:ENSTRUP00000018001, ECO:0000313|Proteomes:UP000005226}; RN [1] {ECO:0000313|Ensembl:ENSTRUP00000018001} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RX PubMed=21551351; RA Kai W., Kikuchi K., Tohari S., Chew A.K., Tay A., Fujiwara A., RA Hosoya S., Suetake H., Naruse K., Brenner S., Suzuki Y., Venkatesh B.; RT "Integration of the genetic map and genome assembly of fugu RT facilitates insights into distinct features of genome evolution in RT teleosts and mammals."; RL Genome Biol. Evol. 3:424-442(2011). RN [2] {ECO:0000313|Ensembl:ENSTRUP00000018001} RP IDENTIFICATION. RG Ensembl; RL Submitted (FEB-2012) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an Ensembl CC automatic analysis pipeline and should be considered as CC preliminary data. {ECO:0000313|Ensembl:ENSTRUP00000018001}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR STRING; 31033.ENSTRUP00000018000; -. DR Ensembl; ENSTRUT00000018075; ENSTRUP00000018001; ENSTRUG00000007303. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR GeneTree; ENSGT00550000075092; -. DR Proteomes; UP000005226; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000005226}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000005226}. FT DOMAIN 7 262 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 739 AA; 84382 MW; 59A3ECB74B9B3069 CRC64; MRLNIDGLLV YFPYDYIYPE QYSYMLELKR TLDAKGHGVL EMPSGTGKTI SLLSLIVAYQ KVVEELRKLL EYHAKQTGQS NNFLALALSS RKNLCIHPEV SALRFGKEVD GKCHSLTASY IRAQRHSDPN VPVCRYFEDF DAVGRQVPLP AGIYNLDDLK DFGRRKGWCP YYLARYSILH ANIVVYSYHY LLDPKIADLV SKELAKKSVV VFDEAHNIDN VCIDSMSVNI TRRTLDRCQG NVDTLQKTIH KIKDTDAAKL KEEYRRLVEG LKEANIARET DVYLSNPVLP DEILREAVPG TIRTAEHFVG FLKRFLEYLK SRLRVQHVVQ ESTPQFLKDI FEKVCIDRKP LRFCAERLQS LLRTLEIADI ADFSAVTLIA NFATLVSTYS QGFTIIIEPF EDRTPTIANP VLHFSCMDPS IAIKPVFQRF QSVVITSGTL SPLDIYPKIL DFRPVTMASF TMTLARTCLC PLIIGRGNDQ VALSSKFETR EDFAVIRNYG NLLLEMSAIV PDGIVAFFTS YVYMENIVAS WYEQGILENI QKNKLIFIET PDAAETSMAL EKYQEACENG RGAILLSVAR GKVSEGIDFV HHFGRAVIMF GVPYVYTQSR ILKARLEYLR DHFQIRENDF LTFDAMRHAA QCVGRAIRGK TDYGLMIFAD KRYARADKRG KLPRWIQEHI SDGSLNLTID ETIQLSKHFL RQMAQPFRQE DQLGLSLLTL EQLESEEMLQ KISQIAQQT // ID H2WEE6_CAEJA Unreviewed; 266 AA. AC H2WEE6; DT 18-APR-2012, integrated into UniProtKB/TrEMBL. DT 18-APR-2012, sequence version 1. DT 11-MAY-2016, entry version 24. DE SubName: Full=Uncharacterized protein {ECO:0000313|EnsemblMetazoa:CJA14284}; GN Name=WBGene00133488 {ECO:0000313|EnsemblMetazoa:CJA14284}; OS Caenorhabditis japonica. OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; OC Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. OX NCBI_TaxID=281687 {ECO:0000313|EnsemblMetazoa:CJA14284}; RN [1] {ECO:0000313|EnsemblMetazoa:CJA14284} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=DF5081 {ECO:0000313|EnsemblMetazoa:CJA14284}; RG Caenorhabditis japonica Sequencing Consortium; RA Wilson R.K.; RL Submitted (AUG-2010) to the EMBL/GenBank/DDBJ databases. RN [2] {ECO:0000313|EnsemblMetazoa:CJA14284} RP IDENTIFICATION. RC STRAIN=DF5081 {ECO:0000313|EnsemblMetazoa:CJA14284}; RG EnsemblMetazoa; RL Submitted (NOV-2012) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00051130}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00556201}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00051146}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR STRING; 281687.CJA14284; -. DR EnsemblMetazoa; CJA14284; CJA14284; CJA14284. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; H2WEE6; -. DR OMA; ILERMCI; -. DR Proteomes; UP000005237; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00491; HELICc2; 1. DR TIGRFAMs; TIGR00604; rad3; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00442371}; KW Complete proteome {ECO:0000313|Proteomes:UP000005237}; KW Helicase {ECO:0000256|SAAS:SAAS00442371}; KW Hydrolase {ECO:0000256|SAAS:SAAS00442371}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00442371}; KW Nucleus {ECO:0000256|SAAS:SAAS00442313}; KW Reference proteome {ECO:0000313|Proteomes:UP000005237}. FT DOMAIN 181 265 HELICc2. {ECO:0000259|SMART:SM00491}. SQ SEQUENCE 266 AA; 29446 MW; 17B3EA8C2029D3F3 CRC64; MKDILERMCI ERKPMRFCAE RLSHLVKTFE LSDASEVLAL SQVTALCTLV STYSKGFSVI VEPSDGSQVA SLTLSCHDSS IAIRPVMNRF QSVIITSGTL SPLEVYPKIL DFDPSVIASF TMTLSRPCLS PLIVSRGNDQ VAMTSRFEQR ADVAVIRNYG NLVLEMASLV PDGMVVFFTS YMYMETVIGV WYEQHIIDEL MKYKLLFIET NDALETSAAL EKYVEACDSG RGACLFSVAR GKVSEGIDFS HHLGKLLLTT VPKGTL // ID H3B2F0_LATCH Unreviewed; 611 AA. AC H3B2F0; DT 18-APR-2012, integrated into UniProtKB/TrEMBL. DT 18-APR-2012, sequence version 1. DT 11-MAY-2016, entry version 31. DE SubName: Full=Uncharacterized protein {ECO:0000313|Ensembl:ENSLACP00000016071}; GN Name=ERCC2 {ECO:0000313|Ensembl:ENSLACP00000016071}; OS Latimeria chalumnae (West Indian ocean coelacanth). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Coelacanthiformes; Coelacanthidae; Latimeria. OX NCBI_TaxID=7897 {ECO:0000313|Ensembl:ENSLACP00000016071, ECO:0000313|Proteomes:UP000008672}; RN [1] {ECO:0000313|Ensembl:ENSLACP00000016071} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RX PubMed=9215903; RA Zardoya R., Meyer A.; RT "The complete DNA sequence of the mitochondrial genome of a 'living RT fossil,' the coelacanth (Latimeria chalumnae)."; RL Genetics 146:995-1010(1997). RN [2] {ECO:0000313|Ensembl:ENSLACP00000016071} RP IDENTIFICATION. RG Ensembl; RL Submitted (FEB-2012) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an Ensembl CC automatic analysis pipeline and should be considered as CC preliminary data. {ECO:0000313|Ensembl:ENSLACP00000016071}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AFYH01034957; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AFYH01034958; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AFYH01034959; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AFYH01034960; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AFYH01034961; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AFYH01034962; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AFYH01034963; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AFYH01034964; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AFYH01034965; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR STRING; 7897.ENSLACP00000016071; -. DR Ensembl; ENSLACT00000016182; ENSLACP00000016071; ENSLACG00000014155. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR GeneTree; ENSGT00550000075092; -. DR InParanoid; H3B2F0; -. DR OMA; KICPYFL; -. DR OrthoDB; EOG70W3CM; -. DR TreeFam; TF101232; -. DR Proteomes; UP000008672; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 2. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000008672}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000008672}. FT DOMAIN 7 290 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 611 AA; 69414 MW; A62AE9A79CE39BB2 CRC64; LRLNIDGLLV YFPYDYIYPE QYSYMLELKR TLDAKGHGVL EMPSGTGKTV SLLSIIVAYQ RMYPMEVTKL IYCSRTVPEI EKVIEELRKL LDYYEKQTGE KMMFLGLALS SRKNLCIHPE VSPPRTGVMI KKKKPPPFYS LLPAFQLCEN VSLYPGCLFL QEFDANGRQV PLPSGVYNLD DLKTYGKFKG WCPYFLARYT ILHANVVVYS YHYLLDPKIA DLVSKELVKK SVVVFDEAHN IAGICDRLLA AKVNHVSASL VFGDNCLAVF SVLAVVGIKE TDAAKLKEEY RRLVEGLKEA NVARETDVYL ANPVLPDEIL QEAVPGNIRT AEHFVGFIKR FLEYLKSRLR VHHMIQESPP SFLKDIFEKV CIERKPLRFC SERLRCLLRT LEITDIADFS PIVLLANFAT LVSTYGKGFT IIIEPFEDRT PTIANPVLHF SCMDASIAIK PVFERFQSVI ITSGVRQYKT GEIFLSILLS IYRVFIKSLC NFKLIVGRGN DQVAISSKFE TREDIAVIRN YGNLLLEMSA IVPDGIVAFF TSYQYMENIV ASWYEQGILE NIQRNKLIFI ETQDAAETSM ALEKYYEACE NGRGAILLSV ARGKVSEGID F // ID H3DNR9_TETNG Unreviewed; 759 AA. AC H3DNR9; DT 18-APR-2012, integrated into UniProtKB/TrEMBL. DT 18-APR-2012, sequence version 1. DT 11-MAY-2016, entry version 31. DE SubName: Full=Uncharacterized protein {ECO:0000313|Ensembl:ENSTNIP00000022168}; OS Tetraodon nigroviridis (Spotted green pufferfish) (Chelonodon OS nigroviridis). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; OC Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; OC Tetraodon. OX NCBI_TaxID=99883 {ECO:0000313|Ensembl:ENSTNIP00000022168, ECO:0000313|Proteomes:UP000007303}; RN [1] {ECO:0000313|Ensembl:ENSTNIP00000022168} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RX PubMed=15496914; DOI=10.1038/nature03025; RA Jaillon O., Aury J.-M., Brunet F., Petit J.-L., Stange-Thomann N., RA Mauceli E., Bouneau L., Fischer C., Ozouf-Costaz C., Bernot A., RA Nicaud S., Jaffe D., Fisher S., Lutfalla G., Dossat C., Segurens B., RA Dasilva C., Salanoubat M., Levy M., Boudet N., Castellano S., RA Anthouard V., Jubin C., Castelli V., Katinka M., Vacherie B., RA Biemont C., Skalli Z., Cattolico L., Poulain J., De Berardinis V., RA Cruaud C., Duprat S., Brottier P., Coutanceau J.-P., Gouzy J., RA Parra G., Lardier G., Chapple C., McKernan K.J., McEwan P., Bosak S., RA Kellis M., Volff J.-N., Guigo R., Zody M.C., Mesirov J., RA Lindblad-Toh K., Birren B., Nusbaum C., Kahn D., Robinson-Rechavi M., RA Laudet V., Schachter V., Quetier F., Saurin W., Scarpelli C., RA Wincker P., Lander E.S., Weissenbach J., Roest Crollius H.; RT "Genome duplication in the teleost fish Tetraodon nigroviridis reveals RT the early vertebrate proto-karyotype."; RL Nature 431:946-957(2004). RN [2] {ECO:0000313|Ensembl:ENSTNIP00000022168} RP IDENTIFICATION. RG Ensembl; RL Submitted (FEB-2012) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an Ensembl CC automatic analysis pipeline and should be considered as CC preliminary data. {ECO:0000313|Ensembl:ENSTNIP00000022168}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR STRING; 99883.ENSTNIP00000022168; -. DR Ensembl; ENSTNIT00000022406; ENSTNIP00000022168; ENSTNIG00000018980. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR GeneTree; ENSGT00550000075092; -. DR InParanoid; H3DNR9; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG70W3CM; -. DR TreeFam; TF101232; -. DR Proteomes; UP000007303; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 2. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000007303}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000007303}. FT DOMAIN 7 285 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 759 AA; 86697 MW; 5542D0D0DD0261CA CRC64; SRLNIDGLLV YFPYDYIYPE QYSYMLELKR TLDAKGHGVL EMPSGTGKTI SLLSLIVAYQ KAFPLEVTKL IYCSRTVPEI EKVVEELRKL LEYYTKQTGE NNNFLALALS SRKNLCIHPE VSALRFGKEV DGKCHSLTAS YIRAQRHSDS NVPACRFFED FDAVGRQVPL PAGIYNLDDL KDFGRRKGWC PYYLARYSIL HANIVVYSYH YLLDPKIADL VSKELAKKSV VVFDEAHNID NVCIDSMSVN ITRRTLDRCQ GNVDTLQRTI HKIKETDAAK LKEEYRRLVE GLKEANIARE TDVYLSNPVL PDEILQEAVP GTIRTAEFVG FLKRFLEYLR SRLRVQHVVQ ESTPQFLKDI FEKVCIDRKP LRFCAELQSL LRTLEIADIA DFSAVTLIAN FATLVSTYSQ EGFTIIIEPF EDRTPTIANP VLHFSCMDPS IAIKPVFQRF QSVVITSGTL SPLDIYPKIL DFRPVTMASF TMTLARTCLC PLIIGRGNDQ VALSSKFETR EDFAVIRNYG NLLLEMSSIV PDGIVAFFTS YVYMENIVAS WYEQGILENI QKNKLIFIET PDAAETSMAL EKYQEACENG RGAILLSVAR GKVSEGIDFV HHFGRAVIMF GVPYVYTQSR ILKARLEYLR DHFQIRENDF LTFDAMRHAA QCVGRAIRGK TDYGLMIFAD KRYARMDKRG KLPRWIQEHI SDGSLNLTLD EAVQLSKHFL RQMAQPFRQE DQLGLSLLTL EQLESEEMLQ KISQIAQQT // ID H3EQS7_PRIPA Unreviewed; 433 AA. AC H3EQS7; DT 18-APR-2012, integrated into UniProtKB/TrEMBL. DT 18-APR-2012, sequence version 1. DT 11-MAY-2016, entry version 29. DE SubName: Full=Uncharacterized protein {ECO:0000313|EnsemblMetazoa:PPA12132}; GN Name=WBGene00101686 {ECO:0000313|EnsemblMetazoa:PPA12132}; OS Pristionchus pacificus (Parasitic nematode). OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Diplogasterida; OC Neodiplogasteridae; Pristionchus. OX NCBI_TaxID=54126 {ECO:0000313|EnsemblMetazoa:PPA12132}; RN [1] {ECO:0000313|EnsemblMetazoa:PPA12132} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=PS312 {ECO:0000313|EnsemblMetazoa:PPA12132}; RA Wilson R.K.; RT "Draft sequence assembly of the Pristionchus pacificus genome."; RL Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases. RN [2] {ECO:0000313|EnsemblMetazoa:PPA12132} RP IDENTIFICATION. RC STRAIN=PS312 {ECO:0000313|EnsemblMetazoa:PPA12132}; RG EnsemblMetazoa; RL Submitted (JUN-2015) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00051130}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00556201}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00051146}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR STRING; 54126.PPA12132; -. DR EnsemblMetazoa; PPA12132; PPA12132; PPA12132. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; H3EQS7; -. DR Proteomes; UP000005239; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 2. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00491; HELICc2; 1. DR TIGRFAMs; TIGR00604; rad3; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00442371}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000005239}; KW Helicase {ECO:0000256|SAAS:SAAS00442371}; KW Hydrolase {ECO:0000256|SAAS:SAAS00442371}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00442371}; KW Nucleus {ECO:0000256|SAAS:SAAS00442313}; KW Reference proteome {ECO:0000313|Proteomes:UP000005239}. FT DOMAIN 284 395 HELICc2. {ECO:0000259|SMART:SM00491}. FT COILED 2 44 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 433 AA; 48848 MW; 782AF3D9350812A4 CRC64; MRQGAMNELS ALERTVERTK EENAAKLQEE YEKMLETMRR NERERANDER LANPVLPSDI LNEAIPGSIR TANHFVIFLK RVVEYIRHRL RSSHVLIESP ASFLKDINDK MFIDRKPLRF CAERLANLAR TLELADASDI GALTQICTLA TLVSTYSKGF TVIVEPAEAS QPALLHLSCM DASIAIRPVM DRFQTVVITS GTLSPLEMYP KILDFDAFSC VSFTMTLARP CIAPLIVARG NDQVAITSRF ESRADVAVIR NYGNLVLEMA SLVPDGMVVF FTSYTYMEHV VATWYDQHII DELMKYKLLF IETNDALETS VALEKSRRDH AGHSVRVHGE SHPASETGVS EGSVRHQNDF LTFDAMRHTA QCMGRALRGK TDYGLMVFAD KRFSRTDKRG KLPRWMQEHL DPANTNLSID EAGQQARSLT SVN // ID H3G8C6_PHYRM Unreviewed; 781 AA. AC H3G8C6; DT 18-APR-2012, integrated into UniProtKB/TrEMBL. DT 18-APR-2012, sequence version 1. DT 11-MAY-2016, entry version 29. DE SubName: Full=Uncharacterized protein {ECO:0000313|EnsemblProtists:Phyra71130}; OS Phytophthora ramorum (Sudden oak death agent). OC Eukaryota; Stramenopiles; Oomycetes; Peronosporales; Phytophthora. OX NCBI_TaxID=164328 {ECO:0000313|EnsemblProtists:Phyra71130}; RN [1] {ECO:0000313|EnsemblProtists:Phyra71130} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Pr102 {ECO:0000313|EnsemblProtists:Phyra71130}; RX PubMed=16946064; DOI=10.1126/science.1128796; RA Tyler B.M., Tripathy S., Zhang X., Dehal P., Jiang R.H.Y., Aerts A., RA Arredondo F.D., Baxter L., Bensasson D., Beynon J.L., Chapman J., RA Damasceno C.M.B., Dorrance A.E., Dou D., Dickerman A.W., Dubchak I.L., RA Garbelotto M., Gijzen M., Gordon S.G., Govers F., Grunwald N.J., RA Huang W., Ivors K.L., Jones R.W., Kamoun S., Krampis K., Lamour K.H., RA Lee M.-K., McDonald W.H., Medina M., Meijer H.J.G., Nordberg E.K., RA Maclean D.J., Ospina-Giraldo M.D., Morris P.F., Phuntumart V., RA Putnam N.H., Rash S., Rose J.K.C., Sakihama Y., Salamov A.A., RA Savidor A., Scheuring C.F., Smith B.M., Sobral B.W.S., Terry A., RA Torto-Alalibo T.A., Win J., Xu Z., Zhang H., Grigoriev I.V., RA Rokhsar D.S., Boore J.L.; RT "Phytophthora genome sequences uncover evolutionary origins and RT mechanisms of pathogenesis."; RL Science 313:1261-1266(2006). RN [2] {ECO:0000313|EnsemblProtists:Phyra71130} RP IDENTIFICATION. RC STRAIN=Pr102 {ECO:0000313|EnsemblProtists:Phyra71130}; RG EnsemblProtists; RL Submitted (JUN-2015) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; DS566001; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR STRING; 164328.Phyra71130; -. DR EnsemblProtists; Phyra71130; Phyra71130; Phyra71130. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; H3G8C6; -. DR Proteomes; UP000005238; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000005238}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000005238}. FT DOMAIN 7 290 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 781 AA; 88326 MW; E0488C13D19A7529 CRC64; MKVDIDGLEV LFPYERMYSE QLQYMRELKR ALDAQGHCML EMPTGTGKTV SLLSLVLAYK HAHPTAGKLV YCTRTVPEMA KCVEEIKKLV AYRQQHLGER AQLTAVCLSS RRNMCVHPRV MAHADGEDVD GQCRKMTASW VRAKAAKARE EAAADVETCS FYEKYDARKS DDTVLPPGVY SVDDLKDLGV QKGWCPYFLT RYVVTFADVV VYNYQYMLDP KVSQLVSRSF EKESIIVFDE AHNIDNVCIE ALSVDLDRRS LDRASRNLTT LSSQVSKLKQ ADKAKLDAEY RRLVEGLRSS DAVVAPTHDI MIANPVLPDD VLDEAIPGNI RRAEHFVAFM RRLIEYLRQR IRVRQVESET PQAFLHHLHQ AISMEIKPMK FCYTRLNSLL RTLEVTNLEE YNSLADVADF ATLVATYADG FMLIIEPFDS ASGVHDPVLQ LSCLDASLAI RPVFERFSSV VITSGTLSPI DLYPRLLNFN PVIRESLPMS VYRSSICPLV ITRGSDQMPV STKFDLRDDL SVVRNYGTLL LEMAACTPDG MVCFFPSYLY MEKIIGQWDS LGVLKRVLTS KLLFIETKDI VETTLALDNY KKACDCGRGA IFFSVARGKV AEGIDFDRHY GRAVILFGIP FQYTLSNTLR ARLEYLRYTH QIREGDFLTF DALRQAAQCA GRVLRSKTDY GLVIFADSRY NRADKRTKLP PWITQFLVDS HLNLSVDMAV FMAKKYLSLM AQPVDESTST PTEWPSGSAS TPRRTNQCSK TTKPLKVKPS SHLSKVSSKN H // ID H3ZLS9_THELN Unreviewed; 643 AA. AC H3ZLS9; DT 18-APR-2012, integrated into UniProtKB/TrEMBL. DT 18-APR-2012, sequence version 1. DT 11-MAY-2016, entry version 24. DE SubName: Full=DNA repair helicase {ECO:0000313|EMBL:EHR79081.1}; GN ORFNames=OCC_01074 {ECO:0000313|EMBL:EHR79081.1}; OS Thermococcus litoralis (strain ATCC 51850 / DSM 5473 / JCM 8560 / OS NS-C). OC Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; OC Thermococcus. OX NCBI_TaxID=523849 {ECO:0000313|EMBL:EHR79081.1, ECO:0000313|Proteomes:UP000015502}; RN [1] {ECO:0000313|EMBL:EHR79081.1, ECO:0000313|Proteomes:UP000015502} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 51850 / DSM 5473 / JCM 8560 / NS-C RC {ECO:0000313|Proteomes:UP000015502}; RX PubMed=22493191; DOI=10.1128/JB.00123-12; RA Gardner A.F., Kumar S., Perler F.B.; RT "Genome sequence of the model hyperthermophilic archaeon Thermococcus RT litoralis NS-C."; RL J. Bacteriol. 194:2375-2376(2012). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP006670; EHR79081.1; -; Genomic_DNA. DR RefSeq; WP_004067416.1; NC_022084.1. DR EnsemblBacteria; EHR79081; EHR79081; OCC_01074. DR GeneID; 16548411; -. DR KEGG; tlt:OCC_01074; -. DR KO; K10844; -. DR Proteomes; UP000015502; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR014001; Helicase_ATP-bd. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00487; DEXDc; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 5. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000313|EMBL:EHR79081.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000015502}; KW Helicase {ECO:0000313|EMBL:EHR79081.1}; KW Hydrolase {ECO:0000313|EMBL:EHR79081.1}; KW Nucleotide-binding {ECO:0000313|EMBL:EHR79081.1}; KW Reference proteome {ECO:0000313|Proteomes:UP000015502}. FT DOMAIN 1 268 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 643 AA; 73648 MW; 4131500B5232BE09 CRC64; MSEYFPYNSL RPNQEEFIKL VDNAVRNGEN LVIEAPTGFG KTVSVLAGAL PYAKDMGYKI IYLARTHKQM DRVIEELKAI SKKTHVSGVE FRSRKELCLH QYIQNFAPDA YNAMIVCKNL KKLGKCEFFE NLKKKKEEFD ELVQYFIQTP AEPITVLTYS KMFDFCPYEL TRKVALNSDV IVASYLYMIN PAIRENFMSY FDFDYSDLIV IFDEAHNLPD QAINALSDKV SIHSINRAIK EADEYKEHET ANFLSIFLKG LENLYQEKLK DMKVEEVPIL PESIFYHVFD VLGINERQLI RILDQMVKAG DAIREDKIER NLPPRSYVGR VGEFLLLWFA LIGKEDYLFL MSRDKGFSLE LVALDPSKAL SFIKNVQSAI FMSGTLTPLE AFADIMGVEG RLKKFPRMVK RENALVLVAR DVSTRGDERS LELYKKLARY VVEAAKFIPK NVGVFTASYE VLEGLLSANV DVRIREETGK KVFIEKKGAS SKENDLLVMA FKEEAKKDGA VLLGVMGGRN SEGQDYSGDE MNGVVLVGIP YARPTPRVQA QIRYFENKFP GKGRYYGYIL PAHRKLVQAA GRVHRSEEEK GAIIVLDYRL LWKSVQRDLP DWMRETLKPV TLASMKRHLI DFYRGEKIKV EGT // ID H6C7M5_EXODN Unreviewed; 819 AA. AC H6C7M5; DT 18-APR-2012, integrated into UniProtKB/TrEMBL. DT 18-APR-2012, sequence version 1. DT 11-MAY-2016, entry version 24. DE SubName: Full=DNA repair helicase rad15 {ECO:0000313|EMBL:EHY58855.1}; GN ORFNames=HMPREF1120_06857 {ECO:0000313|EMBL:EHY58855.1}; OS Exophiala dermatitidis (strain ATCC 34100 / CBS 525.76 / NIH/UT8656) OS (Black yeast) (Wangiella dermatitidis). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; OC Chaetothyriomycetidae; Chaetothyriales; Herpotrichiellaceae; OC Exophiala. OX NCBI_TaxID=858893 {ECO:0000313|EMBL:EHY58855.1, ECO:0000313|Proteomes:UP000007304}; RN [1] {ECO:0000313|Proteomes:UP000007304} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 34100 / CBS 525.76 / NIH/UT8656 RC {ECO:0000313|Proteomes:UP000007304}; RX PubMed=24496724; DOI=10.1534/g3.113.009241; RA Chen Z., Martinez D.A., Gujja S., Sykes S.M., Zeng Q., Szaniszlo P.J., RA Wang Z., Cuomo C.A.; RT "Comparative genomic and transcriptomic analysis of Wangiella RT dermatitidis, a major cause of phaeohyphomycosis and a model black RT yeast human pathogen."; RL G3 (Bethesda) 0:0-0(2014). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; JH226135; EHY58855.1; -; Genomic_DNA. DR RefSeq; XP_009159316.1; XM_009161068.1. DR EnsemblFungi; EHY58855; EHY58855; HMPREF1120_06857. DR GeneID; 20311496; -. DR InParanoid; H6C7M5; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000007304; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EHY58855.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000007304}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EHY58855.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EHY58855.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EHY58855.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000007304}. FT DOMAIN 7 283 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 248 300 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 819 AA; 93371 MW; A9314B38E71F39D8 CRC64; MKFFIDDLPV LFPYPRIYPE QYAYMCDLKR TLDAGGHCVL EMPSGTGKTV SLLSLIVAYQ QHYPEHRKLI YCSRTMSEIE KALAELKALM KYRSDQLGYV EDFRGLGLTS RKNLCLHPSV KREKSGAVVD ARCRSLTAGF VKEKKERGED VEVCVYHDNL DLLEPHNLVP PGVFTLDGLI RYGEEHKQCP YFSARRMMPF CNVIIYSYHY LLDPKIAERV SKELSKDCIV VFDEAHNIDN VCIESLSIDL TEDSLRKATR GANNLERKIE EMKASDEEKL QNEYQKLVEG LREADEARAE DAFMSNPTLP DDLLKEAVPG NIRRAEHFVA FLKRFIEYLK TRMKVLYVIQ ETPPSFLSHL KELTFIERKP LRFCAERLTS LVRTLELTNI EDYQPLQEVA TFATLVATYE TGFLLILEPF ETEQATVPNP ILHFACLDAS IAIKPVFERF SSVIITSGTI SPLEMYPKML NFSTVLQESY PMSLARRSFL PMIVTRGSDQ QSITSGFQSR SDPGVVRNYG ALLFEFAKIT PDGIVVFFPS YLYMEMIISM WQGMGILDQI WTYKLILVET PDAQETSLAL ETYRTACENG KGAILLCVAR GKVSEGIDFD HHFGRTVLCM GAPFQYTESR ILKARLEFLR ENYRIKEQDF LSFDAMRHAA QCLGRVLRGK DDYGIMVLAD RRFQKKRNQL PRWIAEEIHD GQTGLSTDAA VGMAKKFLRS IAQPLGTGQK APDGSTKGKD SWDLKELEQF QREQKARRGE GDFGRHDAYS HDYLNSAVNT TTQVQNGTNG HSNIEDEFDE GIADEELLIA ERMQIEIVG // ID H6QRX6_PUCGT Unreviewed; 784 AA. AC H6QRX6; DT 18-APR-2012, integrated into UniProtKB/TrEMBL. DT 18-APR-2012, sequence version 1. DT 11-MAY-2016, entry version 26. DE SubName: Full=DNA excision repair protein ERCC-2 {ECO:0000313|EMBL:EHS63460.1}; GN ORFNames=PGTG_21591 {ECO:0000313|EMBL:EHS63460.1}; OS Puccinia graminis f. sp. tritici (strain CRL 75-36-700-3 / race SCCL) OS (Black stem rust fungus). OC Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; OC Pucciniomycetes; Pucciniales; Pucciniaceae; Puccinia. OX NCBI_TaxID=418459 {ECO:0000313|EMBL:EHS63460.1, ECO:0000313|Proteomes:UP000008783}; RN [1] {ECO:0000313|Proteomes:UP000008783} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=CRL 75-36-700-3 / race SCCL RC {ECO:0000313|Proteomes:UP000008783}; RX PubMed=21536894; DOI=10.1073/pnas.1019315108; RA Duplessis S., Cuomo C.A., Lin Y.-C., Aerts A., Tisserant E., RA Veneault-Fourrey C., Joly D.L., Hacquard S., Amselem J., RA Cantarel B.L., Chiu R., Coutinho P.M., Feau N., Field M., Frey P., RA Gelhaye E., Goldberg J., Grabherr M.G., Kodira C.D., Kohler A., RA Kuees U., Lindquist E.A., Lucas S.M., Mago R., Mauceli E., Morin E., RA Murat C., Pangilinan J.L., Park R., Pearson M., Quesneville H., RA Rouhier N., Sakthikumar S., Salamov A.A., Schmutz J., Selles B., RA Shapiro H., Tanguay P., Tuskan G.A., Henrissat B., Van de Peer Y., RA Rouze P., Ellis J.G., Dodds P.N., Schein J.E., Zhong S., Hamelin R.C., RA Grigoriev I.V., Szabo L.J., Martin F.; RT "Obligate biotrophy features unraveled by the genomic analysis of rust RT fungi."; RL Proc. Natl. Acad. Sci. U.S.A. 108:9166-9171(2011). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; DS178287; EHS63460.1; -; Genomic_DNA. DR RefSeq; XP_003889745.1; XM_003889696.1. DR EnsemblFungi; EHS63460; EHS63460; PGTG_21591. DR GeneID; 13543125; -. DR KEGG; pgr:PGTG_21591; -. DR InParanoid; H6QRX6; -. DR KO; K10844; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000008783; Unassembled WGS sequence. DR GO; GO:0000439; C:core TFIIH complex; IEA:EnsemblFungi. DR GO; GO:0005829; C:cytosol; IEA:EnsemblFungi. DR GO; GO:0005675; C:holo TFIIH complex; IEA:EnsemblFungi. DR GO; GO:0000112; C:nucleotide-excision repair factor 3 complex; IEA:EnsemblFungi. DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:EnsemblFungi. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0043141; F:ATP-dependent 5'-3' DNA helicase activity; IEA:EnsemblFungi. DR GO; GO:0003684; F:damaged DNA binding; IEA:EnsemblFungi. DR GO; GO:0000717; P:nucleotide-excision repair, DNA duplex unwinding; IEA:EnsemblFungi. DR GO; GO:0033683; P:nucleotide-excision repair, DNA incision; IEA:EnsemblFungi. DR GO; GO:0070816; P:phosphorylation of RNA polymerase II C-terminal domain; IEA:EnsemblFungi. DR GO; GO:0045951; P:positive regulation of mitotic recombination; IEA:EnsemblFungi. DR GO; GO:0010525; P:regulation of transposition, RNA-mediated; IEA:EnsemblFungi. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:EnsemblFungi. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000008783}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000008783}. FT DOMAIN 69 358 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 784 AA; 88772 MW; A4BEE088D056812D CRC64; MCRHDDGMVL SVTATLGEQP RGPGPPCAAW AVRRRQSLYG CMPARHSPGT TSISLWIKFS CKMIFTIDDL EILFPYDKIY PEQYAYMCDL KRTLDLGGHC VLEMPSGTGK TISLLSLIVA YQLYYPERRK LVYCSRTVPE IEKALIELKR LMAYRAAQHR LRAGLTDNSA PTNEDDFLGV GLTSRKNLCI HPQVSREKKG KVVDARCRDL TSAWACEKGR ADPGSVPLCD FHEKLGELEP GNLIPRGVWT LEEITAYGHQ HGICPYFAVR RMLAHADIII YSFHYLLDPK VATQVSKELL PNSIVVFDEA HNIDNVCIES LSIDLTKGML DNAGKSIGAL DEKIREIKRT DASKLQNEYE RLVRGLGQSE NTFESEEEAA ILGNPVLPED LLQEAVPGNI RRAEHFTAFL TRFVEYLKTR MRVLHVVAET PPSFLQHVKD LTYIDRKPLR FCADRLTSLI RTLELTDLDQ YNALQKVASF ATLVATYEKG FLLILEPFET ENATVPNPVF HSDVVFYVLL GTNPFFEGFS SVIIPWGPIS PREMYPKMLG FGATVRDSYS MTLPRNFFLP LGITRGSDQG GIFWGFEFQN DPSVVRNFGT ILIEYCKIVP DGIVAFFPSY LYMESIVAAW HDMGILKEVW KYKLIFVETP DAVETSIALE NYRRACDNGK GAVLLSVARG KVSEGIDFDH NYGRAVIMFG IPYQYTESRI LKARLEFLRD NYRIRENDYL TFDAMRHAAQ CVGRVLRGKT DYGLMVFADK RFARADKRAQ AAEMDQLVHY GYGV // ID H9JCE6_BOMMO Unreviewed; 685 AA. AC H9JCE6; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 11-MAY-2016, entry version 28. DE SubName: Full=Uncharacterized protein {ECO:0000313|EnsemblMetazoa:BGIBMGA007191-TA}; GN Name=LOC101742294 {ECO:0000313|EnsemblMetazoa:BGIBMGA007191-TA}; OS Bombyx mori (Silk moth). OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; OC Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; OC Bombycoidea; Bombycidae; Bombycinae; Bombyx. OX NCBI_TaxID=7091 {ECO:0000313|EnsemblMetazoa:BGIBMGA007191-TA, ECO:0000313|Proteomes:UP000005204}; RN [1] {ECO:0000313|EnsemblMetazoa:BGIBMGA007191-TA} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=p50T {ECO:0000313|EnsemblMetazoa:BGIBMGA007191-TA}; RX PubMed=19121390; DOI=10.1016/j.ibmb.2008.11.004; RG International Silkworm Genome Consortium; RT "The genome of a lepidopteran model insect, the silkworm Bombyx RT mori."; RL Insect Biochem. Mol. Biol. 38:1036-1045(2008). RN [2] {ECO:0000313|EnsemblMetazoa:BGIBMGA007191-TA} RP IDENTIFICATION. RC STRAIN=p50T (Dazao) {ECO:0000313|EnsemblMetazoa:BGIBMGA007191-TA}; RG EnsemblMetazoa; RL Submitted (JUN-2015) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; BABH01031546; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; BABH01031547; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; BABH01031548; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR STRING; 7091.BGIBMGA007191-TA; -. DR EnsemblMetazoa; BGIBMGA007191-RA; BGIBMGA007191-TA; BGIBMGA007191. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; H9JCE6; -. DR OMA; KICPYFL; -. DR OrthoDB; EOG70W3CM; -. DR Proteomes; UP000005204; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000005204}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000005204}. FT DOMAIN 1 201 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 167 194 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 685 AA; 78088 MW; 17061E167E969B87 CRC64; MSNKRLTVDG LLVYFPYDYI YPEQYAYMLE LKRALDAKVS REREGKLVDG KCHALTASYI RDRHERDSSV PICQFYEGFN REGKESMLPY GVYTMDDMKQ YGADRNWCPY FLARFAIIHA EIVVYSYHYL LDPKIAEVVS KELNREAVVV FDEAHNIDNV CIDSLSVKIT RRTIDKSSQA LQQLEKTVAE IRDEDAARLT MEYEQLVAGL KDAAIQRETD TILGNPILPD EVLNEVVPGN IRNAEHFLSF LKRFIEYVKT RLRIQHVVQE SPAGFLKDVS SRVCIERKPL RFCASRLASL MRTLQIPDPS HLSSLVLITH LATLVSTYTK GFTIIIEPFD DKTPNVSNPI LHFSCMDSSI AMRPVFARFQ TVIITSGTLS PLDMYPKILD FNPVIMSSFT MTLARPCILP MIVSKGSDQV AISSKYETRE DVAVIRNYGQ LLVEMSACVP DGVVCFFTSY LYLESVVGAW YDQGVVASLQ RHKLLFIETQ DSAETSFALI NYIKASGCGA QACESGRGAV LLSVARGKVS EGVDFEHHLG RAVLMFGIPY VFTQSRILKA RLDYLRENFQ IRENDFLTFD AMRHAAQCVG RALRGKTDYG IMVFADKRFS RADKRSKLPR WIQEHLRDSL CNLSTEEAVQ ICKRWLRQMA QPFTREDQLG VSLLTLQQLQ SQEQQDKIEK QVIQK // ID I1CFW1_RHIO9 Unreviewed; 675 AA. AC I1CFW1; DT 13-JUN-2012, integrated into UniProtKB/TrEMBL. DT 13-JUN-2012, sequence version 1. DT 11-MAY-2016, entry version 23. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EIE87341.1}; GN ORFNames=RO3G_12052 {ECO:0000313|EMBL:EIE87341.1}; OS Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL OS 43880) (Mucormycosis agent) (Rhizopus arrhizus var. delemar). OC Eukaryota; Fungi; Fungi incertae sedis; Mucoromycotina; Mucorales; OC Mucorineae; Rhizopodaceae; Rhizopus. OX NCBI_TaxID=246409 {ECO:0000313|EMBL:EIE87341.1, ECO:0000313|Proteomes:UP000009138}; RN [1] {ECO:0000313|EMBL:EIE87341.1, ECO:0000313|Proteomes:UP000009138} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880 RC {ECO:0000313|Proteomes:UP000009138}; RX PubMed=19578406; DOI=10.1371/journal.pgen.1000549; RA Ma L.-J., Ibrahim A.S., Skory C., Grabherr M.G., Burger G., Butler M., RA Elias M., Idnurm A., Lang B.F., Sone T., Abe A., Calvo S.E., RA Corrochano L.M., Engels R., Fu J., Hansberg W., Kim J.-M., RA Kodira C.D., Koehrsen M.J., Liu B., Miranda-Saavedra D., O'Leary S., RA Ortiz-Castellanos L., Poulter R., Rodriguez-Romero J., RA Ruiz-Herrera J., Shen Y.-Q., Zeng Q., Galagan J., Birren B.W., RA Cuomo C.A., Wickes B.L.; RT "Genomic analysis of the basal lineage fungus Rhizopus oryzae reveals RT a whole-genome duplication."; RL PLoS Genet. 5:E1000549-E1000549(2009). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CH476741; EIE87341.1; -; Genomic_DNA. DR EnsemblFungi; EIE87341; EIE87341; RO3G_12052. DR InParanoid; I1CFW1; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000009138; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000009138}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000009138}. FT DOMAIN 1 258 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 675 AA; 76954 MW; BECC1578E1728105 CRC64; MPSGTGKTVS LLSLIVAYQM QYPEKHRKLV YCSRTVPEID KALGELKRLM EYRRDQGIQE EFFGIGLTSR KNLCLNPDVS KERKGRSVDS KCRNLTASWV RAKVVKRRPE QEQDGDAMEV DQSPVPLCDF YEQLEAANSP NPIPNGIYTL EDLKAYGRKM RYCPYYLVRR AIPFANVIIY SYHYMLDPKV AELVSRELSK DSIVVFDEAH NIDNVCIESL SIDLTRPMLD ASARSITVLS EKIEEIKNTD AERLKNEYTK LVEGLRDANS ARDEDTFMAS PILPDDLLKE AVPGNIRRAE HFVAFLRRFI EYLKTRLRVM HVVAETPASF LQHLKDVTYI ERKPLRFCAE RLSSLVRTLE LTDLEHFSSL QKVAAFATLT STYDKGFLLI LEPFEHETAT IPNPVLHFTC LDASIAIKPV FDRFSTVVIT SGTLSPLDMY PKMLNFEAVV QESYSMTLSR NCFLPMVITR GSDQVAVSSK FEVRNDPAVV RNFGQIMVEF AKIVPDGVVC FFPSYLYMES IVSMWNDMGI LNEAWKYKLI FVETPDAAET SLALANYRKA CDNGRGAILL SVARGKVSEG IDFDHNYGRA VIMFGIPYQY TESRILKARL EYLRDNLHIR ENDFLTFDAM RHAAQCVGRV LRGKTDYGLM VFADKVDSLP HLILLTLFKA FCKGR // ID I1FUC1_AMPQE Unreviewed; 811 AA. AC I1FUC1; DT 13-JUN-2012, integrated into UniProtKB/TrEMBL. DT 13-JUN-2012, sequence version 1. DT 11-MAY-2016, entry version 27. DE SubName: Full=Uncharacterized protein {ECO:0000313|EnsemblMetazoa:PAC:15719721}; OS Amphimedon queenslandica (Sponge). OC Eukaryota; Metazoa; Porifera; Demospongiae; Heteroscleromorpha; OC Haplosclerida; Niphatidae; Amphimedon. OX NCBI_TaxID=400682 {ECO:0000313|EnsemblMetazoa:PAC:15719721, ECO:0000313|Proteomes:UP000007879}; RN [1] {ECO:0000313|EnsemblMetazoa:PAC:15719721} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RA Lucas S., Shapiro H., Lindquist E., Tice H., Dalin E., RA Glavina del Rio T., Bruce D., Barry K., Pitluck S., Srivastava M., RA Simakov O., Chapman J., Mitros T., Hellsten U., Putnam N.H., Fahey B., RA Gauthier M., Larroux C., Richards G.S., Stanke M., Adamska M., RA Darling A., Dacre M., Degnan S.M., Zhai Y., Adamski M., Calcino A., RA Cummins S.F., Goodstein D.M., Harris C., Shu S., Woodcroft B., RA Leys S.P., Manning G., Degnan B.M., Rokhsar D.S.; RT "The genome of the haplosclerid demosponge Amphimedon queenslandica RT and the evolution of animal complexity."; RL Submitted (MAY-2010) to the EMBL/GenBank/DDBJ databases. RN [2] {ECO:0000313|EnsemblMetazoa:PAC:15719721} RP IDENTIFICATION. RG EnsemblMetazoa; RL Submitted (JUN-2015) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR STRING; 400682.PAC_15719721; -. DR EnsemblMetazoa; PAC:15719721; PAC:15719721; Aqu1.221193. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; I1FUC1; -. DR OMA; KAMGRRQ; -. DR Proteomes; UP000007879; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 2. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000007879}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000007879}. FT DOMAIN 7 282 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 256 299 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 811 AA; 92563 MW; 6E7507C76ED9AE47 CRC64; MKINIDGLLV IFPYEYVYPE QYTYMLDLKR TLDAKGHCVL EMPCGTGKTV SLLALIIAYH MAHPHHIQKL IYCSRTVQEI NKAMSELKRL LDAYKSEFGS TPNVLGVALS SRKNLCIHPM IAGNKEGKLV DTECYKLTAS FVREKHKADK STPVCQFFEE FDVKGRVDPL KPGVYDMDDL KSLGQTKGWC PYYLARYTLG HATVIMYSYH YLLDPKIAEI VSKGLPQQSV VVFDEAHNID NVCIESMSIT IGRKTLEKCT ANINNLQAKL RELGEERLRQ EYQRLVEGLR RAREERENDI QLANPGNKLY TIPGFPTKAF YPIFQQLYNP LTRSTMPISC GKPFNKPSTD CILPDDVLQE ALPGNMRRGE HFLLFMKRFA EYLKSRLLAR HVVSETPKYF LQNIYSTVCI DRKPLRFCSE RLHFMLQTLQ LLELSDYSAI TKVANFATLV STYTEGGFSL IIEPFDNRAP TIFNPILHFS CMDAGIAIKP VFDHYTSVIL TSATISPLDM YPRLLRFQPA LLSSYGISLA RPCICPIIVA RGNDQVSITT KFEERGDTGT NPTIVCTHAI IRNYGNVVVE LSSVIPDGIV AFFPSYEYME QTVHEWVDQG LMSKIQRNKL VFVETVDNAE MNMALNNYRK ACENGRGALL LSVVRGKVSE GVDFDHHYGR AVIMIGIPYV YTQSRILKAR LEFLRDNFQI RENDFLTFDA MRNSAQCIGR ALRGKTDYGI MVFADKRYGR SDKKGKLPKW IQEHLSDAVC SLSIEESVHI CKRFLRQMAQ PFKKEEQIGL ALLTLEQLRE REEKRLANEP N // ID I1GKG0_BRADI Unreviewed; 711 AA. AC I1GKG0; DT 13-JUN-2012, integrated into UniProtKB/TrEMBL. DT 13-JUN-2012, sequence version 1. DT 11-MAY-2016, entry version 22. DE SubName: Full=Uncharacterized protein {ECO:0000313|EnsemblPlants:BRADI1G00427.1}; GN Name=BRADI1G00427 {ECO:0000313|EnsemblPlants:BRADI1G00427.1}; OS Brachypodium distachyon (Purple false brome) (Trachynia distachya). OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; OC Pooideae; Brachypodieae; Brachypodium. OX NCBI_TaxID=15368 {ECO:0000313|EnsemblPlants:BRADI1G00427.1, ECO:0000313|Proteomes:UP000008810}; RN [1] {ECO:0000313|EnsemblPlants:BRADI1G00427.1} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=cv. Bd21 {ECO:0000313|EnsemblPlants:BRADI1G00427.1}; RX PubMed=20148030; DOI=10.1038/nature08747; RG International Brachypodium Initiative; RT "Genome sequencing and analysis of the model grass Brachypodium RT distachyon."; RL Nature 463:763-768(2010). RN [2] {ECO:0000313|EnsemblPlants:BRADI1G00427.1} RP IDENTIFICATION. RC STRAIN=cv. Bd21 {ECO:0000313|EnsemblPlants:BRADI1G00427.1}; RG EnsemblPlants; RL Submitted (NOV-2012) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR STRING; 15368.BRADI1G00427.1; -. DR EnsemblPlants; BRADI1G00427.1; BRADI1G00427.1; BRADI1G00427. DR Gramene; BRADI1G00427.1; BRADI1G00427.1; BRADI1G00427. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; I1GKG0; -. DR OMA; WIQDELL; -. DR Proteomes; UP000008810; Chromosome 1. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000008810}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000008810}. FT DOMAIN 7 273 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 711 AA; 80411 MW; E65945ADB8A76266 CRC64; MWFDLDGLPV CFPYDAIYPE QHEYMGELKR ALDARGHALL EMSTGDADGH RQDGGAHLPH HLLRPCQPLL PAPPPLLHPY RPRDGEDPSR ATPPLLPPPA RRRVPPTRAR PILPQEPLHP PTSVREKAAY DRESATPLCD YFETFDAAAR KGDLALYIQP GVYTLADLRS LGRERRICPY FLARHMVKHA NVIVYSYLYL LDPRVASIVS SEMHKDCVVV FDEAHNIDNV CIEALSVSIR KQTIQGAKGN LRHISQQIDR FKATDASRLN AEYRRLVDGL AQRGNLPISD AWLANPTLPD DILKEAVPGN IRKAEHFLAV LWRLSLLLTL EITDTDEFMH IQKNCDFATL IGTYKRGFSI IIEPYDDRMP DIRDPVIQLS CHDASLAIQP VFNRFQTVVI TSGTLSPIDL YPRLLNFNPV ISRSFTMSLT RDCICPMVLT RGSDQLPVST KFDMRSDPGV VRNYGRLLLE MASAVPDGIV CFFVSYSYMD GIVSSWNDMG ILQRFSVFLQ SPKHMKLIRT SCSTSWYSLK HQMLLRQLAL DNYRKACDCG RGAVFFSVAR GKVAEGIDFD RHYGRLVIMF GVPFQYTLSK ILRARLEYLR ETSQIQEGDF LTFDALRQAA QCVGRVIRSK ADYGMMIFAD KRYSRHDKRS KLPGWILSHL HDAHLNLSTD MALHTALPTE DGAADKAGSS GQKTLLTKEN LQDKARDAME M // ID I1HAZ5_BRADI Unreviewed; 752 AA. AC I1HAZ5; DT 13-JUN-2012, integrated into UniProtKB/TrEMBL. DT 13-JUN-2012, sequence version 1. DT 11-MAY-2016, entry version 26. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KQK24206.1, ECO:0000313|EnsemblPlants:BRADI1G78740.1}; GN Name=BRADI1G78740 {ECO:0000313|EnsemblPlants:BRADI1G78740.1}; GN ORFNames=BRADI_1g78740 {ECO:0000313|EMBL:KQK24206.1}; OS Brachypodium distachyon (Purple false brome) (Trachynia distachya). OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; OC Pooideae; Brachypodieae; Brachypodium. OX NCBI_TaxID=15368 {ECO:0000313|EnsemblPlants:BRADI1G78740.1, ECO:0000313|Proteomes:UP000008810}; RN [1] {ECO:0000313|EMBL:KQK24206.1, ECO:0000313|EnsemblPlants:BRADI1G78740.1} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Bd21 {ECO:0000313|EMBL:KQK24206.1}, and RC cv. Bd21 {ECO:0000313|EnsemblPlants:BRADI1G78740.1}; RX PubMed=20148030; DOI=10.1038/nature08747; RG International Brachypodium Initiative; RT "Genome sequencing and analysis of the model grass Brachypodium RT distachyon."; RL Nature 463:763-768(2010). RN [2] {ECO:0000313|EnsemblPlants:BRADI1G78740.1} RP IDENTIFICATION. RC STRAIN=cv. Bd21 {ECO:0000313|EnsemblPlants:BRADI1G78740.1}; RG EnsemblPlants; RL Submitted (NOV-2012) to UniProtKB. RN [3] {ECO:0000313|EMBL:KQK24206.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=Bd21 {ECO:0000313|EMBL:KQK24206.1}; RG The International Brachypodium Initiative; RA Lucas S., Harmon-Smith M., Lail K., Tice H., Grimwood J., Bruce D., RA Barry K., Lindquist E., Wang M., Pitluck S., Vogel J.P., Garvin D.F., RA Mockler T.C., Jenkins J., Schmutz J., Rokhsar D., Bevan M.W.; RT "WGS assembly of Brachypodium distachyon."; RL Submitted (JUL-2015) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CM000880; KQK24206.1; -; Genomic_DNA. DR RefSeq; XP_003559059.1; XM_003559011.3. DR STRING; 15368.BRADI1G78740.1; -. DR EnsemblPlants; BRADI1G78740.1; BRADI1G78740.1; BRADI1G78740. DR GeneID; 100824230; -. DR Gramene; BRADI1G78740.1; BRADI1G78740.1; BRADI1G78740. DR KEGG; bdi:100824230; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; I1HAZ5; -. DR KO; K10844; -. DR OMA; KICPYFL; -. DR Proteomes; UP000008810; Chromosome 1. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000008810}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000008810}. FT DOMAIN 7 286 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 752 AA; 85184 MW; 3803C2DDD5B003EE CRC64; MWFDLDGLPV CFPYDAIYPE QHEYMGELKR ALDARGHALL EMPTGTGKTA ALISLITSYA LANPSRPLRL FYCTRTVHEM EKTLAELRLL FSHLPPADAC RLLALGLSSR KNLCVHPQVS ASGAVDTGCR RLTASWVCEK AAYDRESATP LCDYFETFDA AARKGDLALY IQPGVYTLAD LRSLGRERRI CPYFLARHMV KHANVVVYSY QYLLDPRVAS IVSSEMQKDC VVVFDEVHNI DNVCIEALSV SIRKQTIQGA KGNLRHISQQ IDRFKATDAS RLNAEYRRLV DGLAQRGNLP ISDAWLANLA LPDDILKEAV PGNIRKAEHF LTVLWRLVRN LDERVDTENV VNERPVSFAT SIYSLAGIET TTLRFLYDRL QSLLLTLEIT DTDEFMHIQK ICDFATLIGT YKRGFSIIIE PYDDRMPDIR DPVIQLSCHD ASLAIQPVFN RFQTVVITSG TLSPIDLYPR LLNFNPVISR SFTMSLTRDC ICPMVLTRGS DQLPVSTKFD MRSDPGVVRN YGRLLLEMAS AVPDGIVCFF VSYSYMDGIV SSWNDMGILQ EIMQHKLVFI ETPDVVETTL ALDNYRKACD CGRGAVFFSV ARGKVVEGID FNRHYGRLVI MFGVPFQYTL SKILRARLEY LRETSQIQEG DFLTFDALRQ AAQCVGRVIR SKADYGMMIF ADKRYSRHDK RSKLPGWIRS HLHDAHLNLS TDMALHTARE FLRRMAQPYD KAGSSGQTEE NLQDKARDAM EM // ID I1HLZ9_BRADI Unreviewed; 758 AA. AC I1HLZ9; DT 13-JUN-2012, integrated into UniProtKB/TrEMBL. DT 13-JUN-2012, sequence version 1. DT 11-MAY-2016, entry version 27. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KQK07579.1, ECO:0000313|EnsemblPlants:BRADI2G36360.1}; GN Name=BRADI2G36360 {ECO:0000313|EnsemblPlants:BRADI2G36360.1}; GN ORFNames=BRADI_2g36360 {ECO:0000313|EMBL:KQK07579.1}; OS Brachypodium distachyon (Purple false brome) (Trachynia distachya). OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; OC Pooideae; Brachypodieae; Brachypodium. OX NCBI_TaxID=15368 {ECO:0000313|EnsemblPlants:BRADI2G36360.1, ECO:0000313|Proteomes:UP000008810}; RN [1] {ECO:0000313|EMBL:KQK07579.1, ECO:0000313|EnsemblPlants:BRADI2G36360.1} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Bd21 {ECO:0000313|EMBL:KQK07579.1}, and RC cv. Bd21 {ECO:0000313|EnsemblPlants:BRADI2G36360.1}; RX PubMed=20148030; DOI=10.1038/nature08747; RG International Brachypodium Initiative; RT "Genome sequencing and analysis of the model grass Brachypodium RT distachyon."; RL Nature 463:763-768(2010). RN [2] {ECO:0000313|EnsemblPlants:BRADI2G36360.1} RP IDENTIFICATION. RC STRAIN=cv. Bd21 {ECO:0000313|EnsemblPlants:BRADI2G36360.1}; RG EnsemblPlants; RL Submitted (NOV-2012) to UniProtKB. RN [3] {ECO:0000313|EMBL:KQK07579.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=Bd21 {ECO:0000313|EMBL:KQK07579.1}; RG The International Brachypodium Initiative; RA Lucas S., Harmon-Smith M., Lail K., Tice H., Grimwood J., Bruce D., RA Barry K., Lindquist E., Wang M., Pitluck S., Vogel J.P., Garvin D.F., RA Mockler T.C., Jenkins J., Schmutz J., Rokhsar D., Bevan M.W.; RT "WGS assembly of Brachypodium distachyon."; RL Submitted (JUL-2015) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CM000881; KQK07579.1; -; Genomic_DNA. DR RefSeq; XP_003568958.1; XM_003568910.3. DR STRING; 15368.BRADI2G36360.1; -. DR EnsemblPlants; BRADI2G36360.1; BRADI2G36360.1; BRADI2G36360. DR GeneID; 100833387; -. DR Gramene; BRADI2G36360.1; BRADI2G36360.1; BRADI2G36360. DR KEGG; bdi:100833387; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; I1HLZ9; -. DR KO; K10844; -. DR OMA; FAVCGGK; -. DR Proteomes; UP000008810; Chromosome 2. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000008810}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000008810}. FT DOMAIN 7 288 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 758 AA; 85747 MW; AE50ABA150600062 CRC64; MKFDLEGLTV HFPYAAIYPE QHAYMGDLKR ALDARGHALL EMPTGTGKTA ALISLITSYS LTNPSRPLRL LYCTRTVHEM EKTLAELRLL FSHLPPAAAR SLLALGLSSR KNLCVHPQAS ASAARDSVDT ACRRLTASWV RDKAASDPDS TPLCDFFESF DRAAAAGDLA SYMPPGVYTL ADLRSLGRER RICPYYLARQ MVKYANVVVY SYQYLLDPKV ASIVSREMQK ECVVVFDEAH NIDNVCIEAL SVSIRKQTLE GAERNLRRIS QEIDRFKATD ANRLRAEYNR LVDGLAQRGN LPISDAWLAN PSLPDDILKE AVPGNIRRAE HFLAVLKRLV RFLDGRLETE NVENEMPVSF VASIHSQAGI DQRMLRFCYD RLQSLLLTLE ITDTDEFMHI QTICDFATLI GTYTRGFSII IEPYDDRMPE IRDPVIQLSC HDASLAIQPV FDRFQTVVIT SGTLSPIDLY PRLLNFNPVI SRSFTMSLTR DCICPMVLTR GSDQLPVSTK FDMRSDPGVV RNYGRLLLEM ASAVPDGIVC FFVSYSYMDG IVNNWNEMGI LQDIMQHKLV FIETPDVVET TLALDNYRKA CDCGRGAVFF SVARGKVAEG IDFDRHYGRL VIMFGVPFQY TLSKILRARL EYLRETFQIK EGDFLTFDAL RQAAQCVGRV IRSKADYGMM IFADKRYSRH DKRSKLPGWI LSHLHDAHLN LSTDMALHTA REFLRRMAQP YDKTGSGGKK TLLTEEDLQD MARDAMEM // ID I1HM00_BRADI Unreviewed; 735 AA. AC I1HM00; DT 13-JUN-2012, integrated into UniProtKB/TrEMBL. DT 13-JUN-2012, sequence version 1. DT 11-MAY-2016, entry version 23. DE SubName: Full=Uncharacterized protein {ECO:0000313|EnsemblPlants:BRADI2G36360.2}; GN Name=BRADI2G36360 {ECO:0000313|EnsemblPlants:BRADI2G36360.2}; OS Brachypodium distachyon (Purple false brome) (Trachynia distachya). OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; OC Pooideae; Brachypodieae; Brachypodium. OX NCBI_TaxID=15368 {ECO:0000313|EnsemblPlants:BRADI2G36360.2, ECO:0000313|Proteomes:UP000008810}; RN [1] {ECO:0000313|EnsemblPlants:BRADI2G36360.2} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=cv. Bd21 {ECO:0000313|EnsemblPlants:BRADI2G36360.2}; RX PubMed=20148030; DOI=10.1038/nature08747; RG International Brachypodium Initiative; RT "Genome sequencing and analysis of the model grass Brachypodium RT distachyon."; RL Nature 463:763-768(2010). RN [2] {ECO:0000313|EnsemblPlants:BRADI2G36360.2} RP IDENTIFICATION. RC STRAIN=cv. Bd21 {ECO:0000313|EnsemblPlants:BRADI2G36360.2}; RG EnsemblPlants; RL Submitted (NOV-2012) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR STRING; 15368.BRADI2G36360.1; -. DR EnsemblPlants; BRADI2G36360.2; BRADI2G36360.2; BRADI2G36360. DR Gramene; BRADI2G36360.2; BRADI2G36360.2; BRADI2G36360. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR Proteomes; UP000008810; Chromosome 2. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000008810}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000008810}. FT DOMAIN 7 288 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 735 AA; 83129 MW; FAFFE3FC90F6EEA0 CRC64; MKFDLEGLTV HFPYAAIYPE QHAYMGDLKR ALDARGHALL EMPTGTGKTA ALISLITSYS LTNPSRPLRL LYCTRTVHEM EKTLAELRLL FSHLPPAAAR SLLALGLSSR KNLCVHPQAS ASAARDSVDT ACRRLTASWV RDKAASDPDS TPLCDFFESF DRAAAAGDLA SYMPPGVYTL ADLRSLGRER RICPYYLARQ MVKYANVVVY SYQYLLDPKV ASIVSREMQK ECVVVFDEAH NIDNVCIEAL SVSIRKQTLE GAERNLRRIS QEIDRFKATD ANRLRAEYNR LVDGLAQRGN LPISDAWLAN PSLPDDILKE AVPGNIRRAE HFLAVLKRLV RFLDGRLETE NVENEMPVSF VASIHSQAGI DQRMLRFCYD RLQSLLLTLE ITDTDEFMHI QTICDFATLI GTYTRGFSII IEPYDDRMPE IRDPVIQLSC HDASLAIQPV FDRFQTVVIT SGTLSPIDLY PRLLNFNPVI SRSFTMSLTR DCICPMVLTR GSDQLPVSTK FDMRSDPGVV RNYGRLLLEM ASAVPDGIVC FFVSYSYMDG IVNNWNEMGI LQDIMQHKLV FIETPDVVET TLALDNYRKA CDCGRGAVFF SVARGKVAEG IDFDRHYGRL VIMFGVPFQY TLSKILRARL EYLRETFQIK EGDFLTFDAL RQAAQCVGRV IRSKADYGMM IFADKRYSRH DKRSKLPGWI LSHLHDAHLN LSTDMALHTA REVCFLTLLY MISTL // ID I1JDF1_SOYBN Unreviewed; 758 AA. AC I1JDF1; DT 13-JUN-2012, integrated into UniProtKB/TrEMBL. DT 13-JUN-2012, sequence version 1. DT 11-MAY-2016, entry version 32. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KRH70310.1, ECO:0000313|EnsemblPlants:GLYMA02G09080.1}; GN ORFNames=GLYMA_02G082200 {ECO:0000313|EMBL:KRH70310.1}; OS Glycine max (Soybean) (Glycine hispida). OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; OC Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; OC Phaseoleae; Glycine; Soja. OX NCBI_TaxID=3847 {ECO:0000313|EnsemblPlants:GLYMA02G09080.1, ECO:0000313|Proteomes:UP000008827}; RN [1] {ECO:0000313|EMBL:KRH70310.1, ECO:0000313|EnsemblPlants:GLYMA02G09080.1} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:GLYMA02G09080.1}; RC TISSUE=Callus {ECO:0000313|EMBL:KRH70310.1}; RX PubMed=20075913; DOI=10.1038/nature08670; RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W., RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., RA May G.D., Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., RA Sandhu D., Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., RA Goodstein D., Barry K., Futrell-Griggs M., Abernathy B., Du J., RA Tian Z., Zhu L., Gill N., Joshi T., Libault M., Sethuraman A., RA Zhang X.-C., Shinozaki K., Nguyen H.T., Wing R.A., Cregan P., RA Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.C., RA Jackson S.A.; RT "Genome sequence of the palaeopolyploid soybean."; RL Nature 463:178-183(2010). RN [2] {ECO:0000313|EnsemblPlants:GLYMA02G09080.1} RP IDENTIFICATION. RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:GLYMA02G09080.1}; RG EnsemblPlants; RL Submitted (MAY-2013) to the EMBL/GenBank/DDBJ databases. RN [3] {ECO:0000313|EMBL:KRH70310.1} RP NUCLEOTIDE SEQUENCE. RC TISSUE=Callus {ECO:0000313|EMBL:KRH70310.1}; RA Hoefler B.C., Straight P.D.; RL Submitted (JUN-2015) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CM000835; KRH70310.1; -; Genomic_DNA. DR RefSeq; XP_003518602.1; XM_003518554.3. DR STRING; 3847.GLYMA02G09080.1; -. DR EnsemblPlants; GLYMA02G09080.1; GLYMA02G09080.1; GLYMA02G09080. DR GeneID; 100801650; -. DR Gramene; GLYMA02G09080.1; GLYMA02G09080.1; GLYMA02G09080. DR KEGG; gmx:100801650; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; I1JDF1; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR Proteomes; UP000008827; Chromosome 2. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000008827}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000008827}. FT DOMAIN 7 285 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 758 AA; 85986 MW; 339BFB8045755DCC CRC64; MKLEIEDITV YFPYDKIYPE QYSYMVELKR ALDAKGHCLL EMPTGTGKTI ALLSLITSYV LSKPHSPLKL LYCTRTVHEM EKTLAELRLL HHYQLRHLGP AAKILALGLS SRKNLCVNPR VLAAENRDSV DAGCRKLTAS WVRAVAAENP SVPSCEFFEQ YERAGSSAVL PPGVYTLQDL RAYGKEKGWC PYYLARHMVQ FANVVVYSYQ YLLDPKVAGI ISKEMQKESV VVFDEAHNID NVCIEALSVS VRRQTIEGAR RNLSRMRQEI DKFKATDAGR LRAEYNRLVE GLALRGDLPA TDAWLANPAL PDDILKEAVP GNIRRAEHFI HVLRRLVQYL EGRLDTENVE KESPVSFVVS ILNHAGIDQK SLKFCYDRLH SLMMTLEITD TDEFLHIQTI CDFATLVGTY ARGFSIIIEP FDERMPHIPD PVLQLCCHDA SLAIKPVFER FQSVVITSGT LSPIDLYPRL LNFNPVVSRS FTMSLTRDCI CPMVLTRGSD QLPVSTKFDM RSDLGVVRNY GRLLLEMASV VPDGIVCFFV SYSYMDGIVN TWNENGILKE IMQHKLVFIE TQDVVETTLA LDNYRKACDC GRGAIFFSVA RGKVAEGIDF DRHYGRLVIM FGVPFQYTLS KILLARLEYL RDTFQIKEGD FLTFDALRQA AQCVGRVIRS KADYGMMIFA DKRYSRHDKR SKLPSWILSH LHDAHLNLST DMALHVARDF LRKMAQPYDK TGGTGRKTLL SQEDLEKMAV SGMGDVMY // ID I1MP75_SOYBN Unreviewed; 758 AA. AC I1MP75; DT 13-JUN-2012, integrated into UniProtKB/TrEMBL. DT 13-JUN-2012, sequence version 1. DT 11-MAY-2016, entry version 31. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KRH08701.1, ECO:0000313|EnsemblPlants:GLYMA16G28290.1}; GN ORFNames=GLYMA_16G167800 {ECO:0000313|EMBL:KRH08701.1}; OS Glycine max (Soybean) (Glycine hispida). OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; OC Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; OC Phaseoleae; Glycine; Soja. OX NCBI_TaxID=3847 {ECO:0000313|EnsemblPlants:GLYMA16G28290.1, ECO:0000313|Proteomes:UP000008827}; RN [1] {ECO:0000313|EMBL:KRH08701.1, ECO:0000313|EnsemblPlants:GLYMA16G28290.1} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:GLYMA16G28290.1}; RC TISSUE=Callus {ECO:0000313|EMBL:KRH08701.1}; RX PubMed=20075913; DOI=10.1038/nature08670; RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W., RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., RA May G.D., Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., RA Sandhu D., Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., RA Goodstein D., Barry K., Futrell-Griggs M., Abernathy B., Du J., RA Tian Z., Zhu L., Gill N., Joshi T., Libault M., Sethuraman A., RA Zhang X.-C., Shinozaki K., Nguyen H.T., Wing R.A., Cregan P., RA Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.C., RA Jackson S.A.; RT "Genome sequence of the palaeopolyploid soybean."; RL Nature 463:178-183(2010). RN [2] {ECO:0000313|EnsemblPlants:GLYMA16G28290.1} RP IDENTIFICATION. RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:GLYMA16G28290.1}; RG EnsemblPlants; RL Submitted (MAY-2013) to the EMBL/GenBank/DDBJ databases. RN [3] {ECO:0000313|EMBL:KRH08701.1} RP NUCLEOTIDE SEQUENCE. RC TISSUE=Callus {ECO:0000313|EMBL:KRH08701.1}; RA Hoefler B.C., Straight P.D.; RL Submitted (JUN-2015) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CM000849; KRH08701.1; -; Genomic_DNA. DR RefSeq; XP_003548117.1; XM_003548069.3. DR STRING; 3847.GLYMA16G28290.1; -. DR EnsemblPlants; GLYMA16G28290.1; GLYMA16G28290.1; GLYMA16G28290. DR GeneID; 100806384; -. DR Gramene; GLYMA16G28290.1; GLYMA16G28290.1; GLYMA16G28290. DR KEGG; gmx:100806384; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; I1MP75; -. DR KO; K10844; -. DR OMA; LVVCNYH; -. DR Proteomes; UP000008827; Chromosome 16. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000008827}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000008827}. FT DOMAIN 7 285 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 758 AA; 86108 MW; 4ECA8A56AD41D17B CRC64; MKFEIEDITV YFPYDNIYPE QYSYMVELKR ALDAKGHCLL EMPTGTGKTI ALLSLITSYV LSKPHSPLKL LYCTRTVHEM EKTLAELRLL HDYQLRHLGP AAKILALGLS SRKNLCVNPR VLAAENRDSV DAGCRKLTAS WVRAVAAENP GVPTCEFFEQ YERAGSSAVL PPGVYTLQDL RVYGKEKGWC PYYLARHMVQ FANVVVYSYQ YLLDPKVAGI ISKEMQKESV VVFDEAHNID NVCIEALSVS VRRQTIEGAR RNLNRMRQEI DKFKATDAGR LRAEYNRLVE GLALRGDLPA TDAWLANPAL PDDILKEAVP GNIRRAEHFI HVLRRLVQYL EGRLDTENVE KESPVSFVVS ILNHAGIDQK ALKFCYDRLH SLMMTLEITD TDEFLHIQTI CDFATLVGTY ARGFSIIIEP FDERMPHIPD PVLQLCCHDA SLAIKPVFER FQSVVITSGT LSPIDLYPRL LNFNPVVSRS FTMSLTRDCI CPMVLTRGSD QLPVSTKFDM RSDLGVVRNY GRLLLEMASV VPDGIVCFFV SYSYMDGIVN TWNENGILKE IMQHKLVFIE TQDVVETTLA LDNYRKACDC GRGAIFFSVA RGKVAEGIDF DRHYGRLVIM FGVPFQYTLS KILLARLEYL RDTFQIKEGD FLTFDALRQA AQCVGRVIRS KADYGMMIFA DKRYSRHDKR SKLPSWILSH LHDAHLNLST DMALHIAREF LRKMAQPYDK TGGTGRKTLL SQEDLEKMAV SGLDDMMY // ID I1PSE1_ORYGL Unreviewed; 758 AA. AC I1PSE1; DT 13-JUN-2012, integrated into UniProtKB/TrEMBL. DT 13-JUN-2012, sequence version 1. DT 11-MAY-2016, entry version 26. DE SubName: Full=Uncharacterized protein {ECO:0000313|EnsemblPlants:ORGLA05G0028900.1}; OS Oryza glaberrima (African rice). OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza. OX NCBI_TaxID=4538 {ECO:0000313|EnsemblPlants:ORGLA05G0028900.1, ECO:0000313|Proteomes:UP000007306}; RN [1] {ECO:0000313|EnsemblPlants:ORGLA05G0028900.1} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=IRGC 96717 {ECO:0000313|EnsemblPlants:ORGLA05G0028900.1}; RA Wing R.A., Yu Y., Rounsley S., Reddy-Marri P., Goicoechea J.L., RA Sisneros N., Lee S., Song X., Angelova A., Kudrna D.P., de Baynast K., RA Zuccolo A.; RT "The complete genome of Oryza glaberrima."; RL Submitted (JUN-2010) to the EMBL/GenBank/DDBJ databases. RN [2] {ECO:0000313|EnsemblPlants:ORGLA05G0028900.1} RP IDENTIFICATION. RG EnsemblPlants; RL Submitted (JUN-2015) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR STRING; 4538.ORGLA05G0028900.1; -. DR EnsemblPlants; ORGLA05G0028900.1; ORGLA05G0028900.1; ORGLA05G0028900. DR Gramene; ORGLA05G0028900.1; ORGLA05G0028900.1; ORGLA05G0028900. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR OMA; DEVWKYK; -. DR Proteomes; UP000007306; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0000724; P:double-strand break repair via homologous recombination; IEA:EnsemblPlants. DR GO; GO:0010286; P:heat acclimation; IEA:EnsemblPlants. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR GO; GO:0045893; P:positive regulation of transcription, DNA-templated; IEA:EnsemblPlants. DR GO; GO:0043687; P:post-translational protein modification; IEA:EnsemblPlants. DR GO; GO:0006457; P:protein folding; IEA:EnsemblPlants. DR GO; GO:0009644; P:response to high light intensity; IEA:EnsemblPlants. DR GO; GO:0042542; P:response to hydrogen peroxide; IEA:EnsemblPlants. DR GO; GO:0010212; P:response to ionizing radiation; IEA:EnsemblPlants. DR GO; GO:0009411; P:response to UV; IEA:EnsemblPlants. DR GO; GO:0000394; P:RNA splicing, via endonucleolytic cleavage and ligation; IEA:EnsemblPlants. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:EnsemblPlants. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000007306}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000007306}. FT DOMAIN 7 288 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 758 AA; 85524 MW; C8ABC15EFFA14930 CRC64; MKFDLEGLTV HFPYAAIYPE QHAYMGELKR ALDARGHALL EMPTGTGKTA ALISLITSYS LASPSRPLRL IYCTRTVHEM EKTLAELRLL FAHLPAAASR SLLALGLSSR KNLCVHPQAS AAAARDSVDT ACRRLTASWV RDRAASDPDS TPLCDFFESF DRAAAAGDLA SYMPPGVYTL ADLRALGRDR GICPYFLARQ MVKYANVVVY SYQYLIDPKV ASIVSREMQK ECVVVFDEAH NIDNVCIEAL SVSIRKQTLE GAERNLRRIS QEIDRFKATD ANRLRAEYNR LVDGLAQRGN LPISDAWLAN PALPEDILKE AVPGNIRRAE HFLAVLRRLV RFLDGRLETE NVENEMPVAF VASIHSQAGI DQKMLRFCYD RLHSLMLTLE ITDTDEFMHI QTICDFATLI GTYTRGFSII IEPYDERMPD IRDPVIQLSC HDASLAIQPV FERFQTVVIT SGTLSPIDLY PRLLNFNPVI SRSFTMSLTR DCICPMVLTR GSDQLPVSTK FDMRSDPGVV RNYGRLLLEM ASAVPDGIVC FFVSYSYMDG IVNSWNEMGI LQDIMQHKLV FIETPDVVET TLALDNYRKS CDCGRGAIFF SVARGKVAEG IDFDRHYGRL VIMFGVPFQY TLSRILLARL EYLRETFQIK EGDFLTFDAL RQAAQCVGRV IRSKADYGMM IFADKRYSRH DKRSKLPGWI LSHLHDAHLN LSTDMALHIA REFLRRMAQP YDKTGSGGNK TLLTEEDLQN MAQDAMEM // ID I2FUT4_USTH4 Unreviewed; 847 AA. AC I2FUT4; DT 11-JUL-2012, integrated into UniProtKB/TrEMBL. DT 11-JUL-2012, sequence version 1. DT 11-MAY-2016, entry version 26. DE SubName: Full=Probable RAD3-DNA helicase/ATPase {ECO:0000313|EMBL:CCF50677.1}; GN ORFNames=UHOR_06214 {ECO:0000313|EMBL:CCF50677.1}; OS Ustilago hordei (strain Uh4875-4) (Barley covered smut fungus). OC Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; OC Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Ustilago. OX NCBI_TaxID=1128400 {ECO:0000313|Proteomes:UP000006174}; RN [1] {ECO:0000313|EMBL:CCF50677.1, ECO:0000313|Proteomes:UP000006174} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Uh4875-4 {ECO:0000313|Proteomes:UP000006174}; RX PubMed=22623492; DOI=10.1105/tpc.112.097261; RA Laurie J.D., Ali S., Linning R., Mannhaupt G., Wong P., Gueldener U., RA Muensterkoetter M., Moore R., Kahmann R., Bakkeren G., Schirawski J.; RT "Genome comparison of barley and maize smut fungi reveals targeted RT loss of RNA silencing components and species-specific presence of RT transposable elements."; RL Plant Cell 24:1733-1745(2012). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:CCF50677.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CAGI01000157; CCF50677.1; -; Genomic_DNA. DR EnsemblFungi; CCF50677; CCF50677; UHOR_06214. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000006174; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CCF50677.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000006174}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:CCF50677.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CCF50677.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CCF50677.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000006174}. FT DOMAIN 7 319 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 847 AA; 96704 MW; F3B29D356663527A CRC64; MKFYIDELPV LFPYPRIYPE QYAYMADLKR TLDANGHCVL EMPSGTGKTV SLLSLIVSYQ QFHPAKRKLI YCSRTVPEIE KALAELKRLM EYRARYNLKQ GQQSQVLRNQ AEQGNAPSEH HIQMEGRGKA GAQMQDILAL GLSSRKNLCI HPDVSRERKG KVVDARCRDM TSSWACEKGR QDPGSVELCD FHEELGNMEP GQLIPPGVWT LEEVKEYARD KRICPYFAVR RMIPFVDIII YSFHYLLDPK VAEQVSKEMS KDAIVIFDEA HNIDNVCIES LSIDLTRPML DSAYRSINQL SERVDQIKKT DASKLQDEYA RLVQGLQEQG DQREAETFMA NPVLPDDLLS EAIPGNIRRA EHFVAFLKRF VEYLKTRMRV LHVVAETPAS FLQHLKDITY IERKPLRFCA ERLRMLVGTL ELTRLDEYSA LQKVAAFATL VATYDKGFLL ILEPFETENA TVPNPIFHFT CLDASLAIAP VFERFSSVII TSGTISPLDM YPKMLKFDAI IQESYAMTLT RQCFLPLVIT RGSDQVAISS RFEVRNDPAV VRNYGSILIE YAKCVPDGIV AFFPSYLYME SIVAAWHDMG ILDQVWKYKL IFIETPDAPE TSIALENYRR ACDNGRGAIL LSVARGKVSE GIDFDHNYGR AVIMFGVPYQ YTESRILKAR LEFLRDNFRI RENDFLTFDA MRHAAQCVGR VLRGKTDYGL MVFADKRFAR ADKRNKLPKW IAQYIKETHS NLSTDMAVVE SKLFIRSMAQ PYPEGKNGVS LWQLSDIEQR QAKERETFNK LMGGELKVNA DGEVVDKDDS HSHMEVGAAK QEDHFDKEFG QGELLASIDD LDTMQEG // ID I2H525_TETBL Unreviewed; 779 AA. AC I2H525; DT 11-JUL-2012, integrated into UniProtKB/TrEMBL. DT 11-JUL-2012, sequence version 1. DT 11-MAY-2016, entry version 26. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CCH61477.1}; GN Name=TBLA0E04230 {ECO:0000313|EMBL:CCH61477.1}; GN ORFNames=TBLA_0E04230 {ECO:0000313|EMBL:CCH61477.1}; OS Tetrapisispora blattae (strain ATCC 34711 / CBS 6284 / DSM 70876 / OS NBRC 10599 / NRRL Y-10934 / UCD 77-7) (Yeast) (Kluyveromyces blattae). OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; OC Saccharomycetes; Saccharomycetales; Saccharomycetaceae; OC Tetrapisispora. OX NCBI_TaxID=1071380 {ECO:0000313|EMBL:CCH61477.1, ECO:0000313|Proteomes:UP000002866}; RN [1] {ECO:0000313|EMBL:CCH61477.1, ECO:0000313|Proteomes:UP000002866} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 34711 / CBS 6284 / DSM 70876 / NBRC 10599 / NRRL Y-10934 / RC UCD 77-7 {ECO:0000313|Proteomes:UP000002866}; RX PubMed=22123960; DOI=10.1073/pnas.1112808108; RA Gordon J.L., Armisen D., Proux-Wera E., OhEigeartaigh S.S., RA Byrne K.P., Wolfe K.H.; RT "Evolutionary erosion of yeast sex chromosomes by mating-type RT switching accidents."; RL Proc. Natl. Acad. Sci. U.S.A. 108:20024-20029(2011). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; HE806320; CCH61477.1; -; Genomic_DNA. DR RefSeq; XP_004180996.1; XM_004180948.1. DR EnsemblFungi; CCH61477; CCH61477; TBLA_0E04230. DR GeneID; 14496550; -. DR KEGG; tbl:TBLA_0E04230; -. DR InParanoid; I2H525; -. DR KO; K10844; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000002866; Chromosome 5. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000002866}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000002866}. FT DOMAIN 7 285 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 779 AA; 89758 MW; EEB3FBBC7139F464 CRC64; MKFFIDDLPV LFPYPKIYPE QYQYMCDIKK TLDVGGNSIL EMPSGTGKTV SLLSLTIAYQ MHYPEHRKII YCSRTMSEIE KALVELENLM DYREKELGVK EEFRGLGLTS RKNLCLHPQI SKEKKGTVVD EKCRRLTNGQ NKRILENDPD AKVELCDYHE NLYKLDVENY LPNGVFSFEK LIRYCEERTL CPYFIVRRMI SMCNIIIYSY HYLLDPKIAE RVSKEVSKDS IVIFDEAHNI DNVCIESLSL DLTNDVLRKA SKGATTLAEK IEEVREIDSS KLQDEYEKLV KGLHASDILN AEEEPVVETP VLSEDLLTEA IPGNIRRAEH FVAFLKRLIE YLKTRMKVLH VISETPKSFL QHLKQLTFID RKPLRFCSER LSLLVRTLEV TEIEDFNALK DIATFATLIS TYEEGFLLII EPYEIENAAV PNPIMRFTCL DASIAIKPVF ERFSSVIITS GTISPLDMYP RMLNFTTTLQ KSYSMTLTKK SFLPMIITKG SDQVAISSRF EIRSDPSIVR NYGSMLVEFA KITPDGMVVF FPSYLYMESI ISMWQTMGIL DEVWKHKLIL VETPDAQETS LALETYRKAC SNGRGAILLS VARGKVSEGI DFDHHYGRTV LMIGIPFQYT ESRILKARLE FLRENYQIRE NDFLSFDAMR HAAQCLGRVL RGKDDYGVMV LADRRFSRRR NQLPKWISQG LSDADLNLST DMAIANTKQF LRAMAQPTDP KDQEGVSVWN NEELVQFQQE QQKKKGNFER TSQENGKTEE DDDDDIEMS // ID I3JLJ9_ORENI Unreviewed; 760 AA. AC I3JLJ9; DT 11-JUL-2012, integrated into UniProtKB/TrEMBL. DT 11-JUL-2012, sequence version 1. DT 11-MAY-2016, entry version 30. DE SubName: Full=Uncharacterized protein {ECO:0000313|Ensembl:ENSONIP00000009743}; GN Name=ercc2 {ECO:0000313|Ensembl:ENSONIP00000009743}; OS Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; OC Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; OC Pseudocrenilabrinae; Oreochromini; Oreochromis. OX NCBI_TaxID=8128 {ECO:0000313|Ensembl:ENSONIP00000009743, ECO:0000313|Proteomes:UP000005207}; RN [1] {ECO:0000313|Ensembl:ENSONIP00000009743} RP IDENTIFICATION. RG Ensembl; RL Submitted (MAY-2012) to UniProtKB. RN [2] {ECO:0000313|Proteomes:UP000005207} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RX PubMed=25186727; DOI=10.1038/nature13726; RA Brawand D., Wagner C.E., Li Y.I., Malinsky M., Keller I., Fan S., RA Simakov O., Ng A.Y., Lim Z.W., Bezault E., Turner-Maier J., RA Johnson J., Alcazar R., Noh H.J., Russell P., Aken B., Alfoldi J., RA Amemiya C., Azzouzi N., Baroiller J.F., Barloy-Hubler F., Berlin A., RA Bloomquist R., Carleton K.L., Conte M.A., D'Cotta H., Eshel O., RA Gaffney L., Galibert F., Gante H.F., Gnerre S., Greuter L., Guyon R., RA Haddad N.S., Haerty W., Harris R.M., Hofmann H.A., Hourlier T., RA Hulata G., Jaffe D.B., Lara M., Lee A.P., MacCallum I., Mwaiko S., RA Nikaido M., Nishihara H., Ozouf-Costaz C., Penman D.J., Przybylski D., RA Rakotomanga M., Renn S.C., Ribeiro F.J., Ron M., Salzburger W., RA Sanchez-Pulido L., Santos M.E., Searle S., Sharpe T., Swofford R., RA Tan F.J., Williams L., Young S., Yin S., Okada N., Kocher T.D., RA Miska E.A., Lander E.S., Venkatesh B., Fernald R.D., Meyer A., RA Ponting C.P., Streelman J.T., Lindblad-Toh K., Seehausen O., RA Di Palma F.; RT "The genomic substrate for adaptive radiation in African cichlid RT fish."; RL Nature 513:375-381(2014). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an Ensembl CC automatic analysis pipeline and should be considered as CC preliminary data. {ECO:0000313|Ensembl:ENSONIP00000009743}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AERX01041029; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR STRING; 8128.ENSONIP00000009743; -. DR Ensembl; ENSONIT00000009749; ENSONIP00000009743; ENSONIG00000007730. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR GeneTree; ENSGT00550000075092; -. DR InParanoid; I3JLJ9; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG70W3CM; -. DR TreeFam; TF101232; -. DR Proteomes; UP000005207; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 2. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000005207}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000005207}. FT DOMAIN 7 285 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 249 276 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 760 AA; 87057 MW; 3A28B741FB266B0B CRC64; MKLNIEGLLV YFPYDYIYPE QYSYMLELKR TLDAKGHGVL EMPSGTGKTI SLLSLIVAYQ RAFPLEVTKL IYCSRTVPEI EKVVEELRKL MEFYTKETGE SNNFLALALS SRKNLCIHPE VSSLRFGKEV DGKCHSLTAS YIRAQHHSNP NLPVCRFYEE FDSVGRQVPL PAGIYNLDDL KAFGRRKGWC PYYLARYSIL HANIVVYSYH YLLDPKIADL VSKELAKKSV VVFDEAHNID NVCIDSMSVN ITRRTLDRCQ NNVDTLQNTI HKIKETDAAK LREEYRRLVE GLKEANVARE TDIYLANPVL PDEILQEAVP GSIRTAEHFV GFMRRFLEYL KSRLRVQHVV QESAPQFLKD IFDKVCIDRK PLRFCAERLQ SLLRTLEIAD IADFSAVTLI SNFATLVSTY RKGFTIIIEP FEDRTPTIAN PVLHFSCMDP SIAIKPVFQR FQSVVITSGT LSPLDIYPRI LDFRPVTMAS FTMTLARTCL CPLIVGRGND QVALSSKFET REDFAVIRNY GNLLLEMSAI VPDGIVAFFT SYVYMENIVA SWYEQGILEN IQRNKLIFIE TQDAAETSMA LEKYQEACEN GRGAILLSVA RGKVSEGIDF VHHYGRAVLM FGVPYVYTQS RILKARLEYL RDQFQIREND FLTFDAMRHA AQCVGRAIRG KTDYGLMIFA DKRYARADKR GKLPRWIQEH INDGSLNLTV DEAVQLSKHF LRQMAQPFRQ EDQLGLSLLT LEQLESEEML QKITQIAHQT // ID I3LXZ7_ICTTR Unreviewed; 771 AA. AC I3LXZ7; DT 11-JUL-2012, integrated into UniProtKB/TrEMBL. DT 11-JUL-2012, sequence version 1. DT 11-MAY-2016, entry version 29. DE SubName: Full=Uncharacterized protein {ECO:0000313|Ensembl:ENSSTOP00000000991}; GN Name=ERCC2 {ECO:0000313|Ensembl:ENSSTOP00000000991}; OS Ictidomys tridecemlineatus (Thirteen-lined ground squirrel) OS (Spermophilus tridecemlineatus). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; OC Sciuridae; Xerinae; Marmotini; Ictidomys. OX NCBI_TaxID=43179 {ECO:0000313|Ensembl:ENSSTOP00000000991, ECO:0000313|Proteomes:UP000005215}; RN [1] {ECO:0000313|Ensembl:ENSSTOP00000000991} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RG The Broad Institute Genome Assembly & Analysis Group; RG Computational R&D Group; RG and Sequencing Platform; RA Di Palma F., Alfoldi J., Johnson J., Berlin A., Gnerre S., Jaffe D., RA MacCallum I., Young S., Walker B.J., Lindblad-Toh K.; RT "The Draft Genome of Spermophilus tridecemlineatus."; RL Submitted (NOV-2011) to the EMBL/GenBank/DDBJ databases. RN [2] {ECO:0000313|Ensembl:ENSSTOP00000000991} RP IDENTIFICATION. RG Ensembl; RL Submitted (MAY-2012) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an Ensembl CC automatic analysis pipeline and should be considered as CC preliminary data. {ECO:0000313|Ensembl:ENSSTOP00000000991}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AGTP01097021; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR STRING; 43179.ENSSTOP00000000991; -. DR Ensembl; ENSSTOT00000001111; ENSSTOP00000000991; ENSSTOG00000001106. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR GeneTree; ENSGT00550000075092; -. DR InParanoid; I3LXZ7; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG70W3CM; -. DR TreeFam; TF101232; -. DR Proteomes; UP000005215; Unassembled WGS sequence. DR GO; GO:0019907; C:cyclin-dependent protein kinase activating kinase holoenzyme complex; IEA:Ensembl. DR GO; GO:0005737; C:cytoplasm; IEA:Ensembl. DR GO; GO:0005675; C:holo TFIIH complex; IEA:Ensembl. DR GO; GO:0071817; C:MMXD complex; IEA:Ensembl. DR GO; GO:0043139; F:5'-3' DNA helicase activity; IEA:Ensembl. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0008353; F:RNA polymerase II carboxy-terminal domain kinase activity; IEA:Ensembl. DR GO; GO:0007568; P:aging; IEA:Ensembl. DR GO; GO:0006915; P:apoptotic process; IEA:Ensembl. DR GO; GO:0030282; P:bone mineralization; IEA:Ensembl. DR GO; GO:0008283; P:cell proliferation; IEA:Ensembl. DR GO; GO:0032289; P:central nervous system myelin formation; IEA:Ensembl. DR GO; GO:0007059; P:chromosome segregation; IEA:Ensembl. DR GO; GO:0040016; P:embryonic cleavage; IEA:Ensembl. DR GO; GO:0043249; P:erythrocyte maturation; IEA:Ensembl. DR GO; GO:0030198; P:extracellular matrix organization; IEA:Ensembl. DR GO; GO:0035315; P:hair cell differentiation; IEA:Ensembl. DR GO; GO:0048820; P:hair follicle maturation; IEA:Ensembl. DR GO; GO:0060218; P:hematopoietic stem cell differentiation; IEA:Ensembl. DR GO; GO:0001701; P:in utero embryonic development; IEA:Ensembl. DR GO; GO:0035264; P:multicellular organism growth; IEA:Ensembl. DR GO; GO:0033683; P:nucleotide-excision repair, DNA incision; IEA:Ensembl. DR GO; GO:0043388; P:positive regulation of DNA binding; IEA:Ensembl. DR GO; GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IEA:Ensembl. DR GO; GO:0009791; P:post-embryonic development; IEA:Ensembl. DR GO; GO:1901990; P:regulation of mitotic cell cycle phase transition; IEA:Ensembl. DR GO; GO:0006979; P:response to oxidative stress; IEA:Ensembl. DR GO; GO:0021510; P:spinal cord development; IEA:Ensembl. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:Ensembl. DR GO; GO:0006283; P:transcription-coupled nucleotide-excision repair; IEA:Ensembl. DR GO; GO:0009650; P:UV protection; IEA:Ensembl. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000005215}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000005215}. FT DOMAIN 16 292 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 86 109 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 771 AA; 87769 MW; 6113947E7FF44987 CRC64; GGPAPLAPAA RLNVDGLLVY FPYDYIYPEQ FSYMLELKRT LDAKGHGVLE MPSGTGKTVS LLALIMAYQR AYPLEVTKLI YCSRTVPEIE KVIEELRKLL NFYEKQEDEK LPFLGLALSS RKNLCIHPEV TPLRFGKDVD GKCHSLTASY VRAQYQQDAS LPHCRFYEEF DAHGRQAPLP AGIYNLDDLK ALGRRQGWCP YFLARYSILH ANVVVYSYHY LLDPKIADLV SKELARKAVV VFDEAHNIDN VCIDSMSVNL TRRTLDRCQG NLETLQKTVL RIKETDEQRL RDEYRRLVEG LREASAARET DAHLANPVLP DEVLKEAVPG SIRTAEHFLG FLRRLLEFVK WRLRVQHVVQ ESPPAFLSSL AQRVCIQRKP LRFCAERLRS LLHTLEIADL ADFSPLTLLA NFATLVSTYA KGFTIIIEPF DDRTPTIANP VLHFSCMDAS LAIKPVFERF QSVIITSGTL SPLDIYPKIL DFHPVTMATF TMTLARVCLC PMIIGRGNDQ VAISSKFETR EDIAVIRNYG NLLLEMSAVV PDGIVAFFTS YQYMESTVAS WYEQGILENI QRNKLLFIET QDGAETSVAL EKYQEACENG RGAILLSVAR GKVSEGIDFV HHFGRAVIMF GVPYVYTQSR ILKARLEYLR DQFQIRENDF LTFDAMRHAA QCVGRAIRGK TDYGLMVFAD KAKRFARADK RGKLPRWIQE HLTDANLNLT VDEGVQVAKY FLRQMAQPFH REDQLGLSLL SLEQLESEET LRRIEQIAQQ M // ID I3VV47_THESW Unreviewed; 779 AA. AC I3VV47; DT 05-SEP-2012, integrated into UniProtKB/TrEMBL. DT 05-SEP-2012, sequence version 1. DT 11-MAY-2016, entry version 22. DE SubName: Full=DEAD2 domain-containing protein {ECO:0000313|EMBL:AFK86392.1}; GN OrderedLocusNames=Tsac_1385 {ECO:0000313|EMBL:AFK86392.1}; OS Thermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485). OC Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; OC Thermoanaerobacterales Family III. Incertae Sedis; OC Thermoanaerobacterium. OX NCBI_TaxID=1094508 {ECO:0000313|EMBL:AFK86392.1, ECO:0000313|Proteomes:UP000006178}; RN [1] {ECO:0000313|Proteomes:UP000006178} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=DSM 8691 / JW/SL-YS485 {ECO:0000313|Proteomes:UP000006178}; RA Brown S.D., Land M.L., Herring C.D.; RT "Thermoanaerobacterium saccharolyticum JW/SL-YS485."; RL Submitted (DEC-2011) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP003184; AFK86392.1; -; Genomic_DNA. DR EnsemblBacteria; AFK86392; AFK86392; Tsac_1385. DR KEGG; tsh:Tsac_1385; -. DR OMA; DYNYYFD; -. DR BioCyc; TSAC1094508:GLMA-1407-MONOMER; -. DR Proteomes; UP000006178; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR001650; Helicase_C. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF00270; DEAD; 1. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. DR PROSITE; PS51194; HELICASE_CTER; 1. PE 4: Predicted; KW Complete proteome {ECO:0000313|Proteomes:UP000006178}; KW Reference proteome {ECO:0000313|Proteomes:UP000006178}. FT DOMAIN 184 432 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT DOMAIN 588 769 Helicase C-terminal. FT {ECO:0000259|PROSITE:PS51194}. SQ SEQUENCE 779 AA; 90784 MW; 24E184BF5CC68640 CRC64; MVKEKIKISV RDMVEFILRC GDLNDEFLGS SNLRALEGTK IHKKIQSSKG ENYKKEVTLR YEREFDEFII VVEGRADGII VDDGNVTIDE IKTTSANIDE IDEAYNPLHL AQAKCYAYIY SIQNSLNMID IQLTYYQVDD GDMKFLRYTY SLDELKIFFD DLIEKYYYWA SMLYNWIRER NSSIDKMDFP YKDFRKGQKK LMVAVYKAIE NGKNLFAEAP TGIGKTISTI FPSLKAMKKG LTSKIFYLTA KTIARTVAEE TFNTLRTKGL KAKTLVLTAK EKICFNEKTE CRPEACMFAK GHFDRINDAL VDIFLNEDNF NRSKIEEYAK KHMVCPFEFS LDLSLWSDVI ICDYNYVFDP NVGLKRFFQE KTDFTLLVDE AHNLVDRSRE MFSAELFKKD FLSLKKEIKG KSIKLEKSLS KINSIFLKLK KRCGEKGYFV TDEIFSDLNG YLKQFIGEAE LFLSNERKPF AGEAVTDLYF EVIRYLKVSD MYNESYTTYV EKKADDLKVK LFCLDPSKLL NETLEKVRST VFFSATLIPM AYYMSLLGGN RQDYGLRLDS PFDIKNRMIL IANDVSTKYK DREKTSEEIV EYIHTVVSKK KGNYIVYFPS YEYLNMVYDI YKERGIGYLL KQESAMMENE KDDFLRMFED GRNGVLAFCV LGGAFSEGID LAKDRLIGVI IIGVGIPQIC LERDIIREHF ERKYGQGYEY AYLYPGFNKV MQSAGRVIRT EEDKGIILLI DERFLHKNYI KIFPKEWFPY TKVNKSNLGF HLDSFWGNF // ID I4D2U5_DESAJ Unreviewed; 792 AA. AC I4D2U5; DT 05-SEP-2012, integrated into UniProtKB/TrEMBL. DT 05-SEP-2012, sequence version 1. DT 11-MAY-2016, entry version 23. DE SubName: Full=DNA helicase, Rad3 {ECO:0000313|EMBL:AFM40119.1}; GN OrderedLocusNames=Desaci_1080 {ECO:0000313|EMBL:AFM40119.1}; OS Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4). OC Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; OC Desulfosporosinus. OX NCBI_TaxID=646529 {ECO:0000313|EMBL:AFM40119.1, ECO:0000313|Proteomes:UP000002892}; RN [1] {ECO:0000313|EMBL:AFM40119.1, ECO:0000313|Proteomes:UP000002892} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=DSM 22704 / JCM 16185 / SJ4 RC {ECO:0000313|Proteomes:UP000002892}; RX PubMed=23105050; DOI=10.1128/JB.01392-12; RA Pester M., Brambilla E., Alazard D., Rattei T., Weinmaier T., Han J., RA Lucas S., Lapidus A., Cheng J.F., Goodwin L., Pitluck S., Peters L., RA Ovchinnikova G., Teshima H., Detter J.C., Han C.S., Tapia R., RA Land M.L., Hauser L., Kyrpides N.C., Ivanova N.N., Pagani I., RA Huntmann M., Wei C.L., Davenport K.W., Daligault H., Chain P.S., RA Chen A., Mavromatis K., Markowitz V., Szeto E., Mikhailova N., RA Pati A., Wagner M., Woyke T., Ollivier B., Klenk H.P., Spring S., RA Loy A.; RT "Complete genome sequences of Desulfosporosinus orientis DSM765T, RT Desulfosporosinus youngiae DSM17734T, Desulfosporosinus meridiei RT DSM13257T, and Desulfosporosinus acidiphilus DSM22704T."; RL J. Bacteriol. 194:6300-6301(2012). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP003639; AFM40119.1; -; Genomic_DNA. DR RefSeq; WP_014826127.1; NC_018068.1. DR EnsemblBacteria; AFM40119; AFM40119; Desaci_1080. DR KEGG; dai:Desaci_1080; -. DR OMA; DYNYYFD; -. DR BioCyc; DACI646529:GLCJ-1079-MONOMER; -. DR Proteomes; UP000002892; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 4. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000313|EMBL:AFM40119.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000002892}; KW Helicase {ECO:0000313|EMBL:AFM40119.1}; KW Hydrolase {ECO:0000313|EMBL:AFM40119.1}; KW Nucleotide-binding {ECO:0000313|EMBL:AFM40119.1}; KW Reference proteome {ECO:0000313|Proteomes:UP000002892}. FT DOMAIN 190 436 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 792 AA; 91306 MW; 4EF8AE1E63D4DC36 CRC64; MKIVKVSVRD LVEFVLKRGD LQPASLGAAR TQDGIKAHQY IQKHSGLNYL PEVTLSYLYV PRENQYISGL DEEICLEVKG RADGIFKTES GVCVDEIKTT SMDLSLLEES ISGMHWAQAQ CYAFMYAVME SLENMEVQLT YYQLDTAETR KFNKWFTLEE LAEFFFNLGE RYLAWACRVQ EWLIVRDESI HNLNFPFEAY RVGQRDLAVG VYQTIKHGEM LFAQAPTGIG KTMGTLFPAL KAMSEGLTVQ IFYLTAKTIT RTVAERALSD LQNKGLKIKR LTLTAKRKVC FLPEVSCLPE ECSYAKGYYD RLRGAVEDMF NEESWTRQVL EDHARKHSIC PFEFSLEMAL WADVVIGDYN YVFDPRVYLK RFFLDGGEYT FLVDEAHNLV DRAREMFSAE LVKEDWLKLK RLAKRDNPRL SKSLNRVNTA LGKEKNRCLA ANSQGEFVEK GLPGSLIKVL RQFVKEVEVF LKSKAETYPW QEQLLDLYFQ TLTFLRTAES YDTRYVTCLQ FREEFRVKLF CLDPAIRLRE AFEKGKASIL FSATLSPMDY FMNVLGGEET SFKLRLSSPF PAGNLHVMIH KSIPTKYKQR ALSYEQIAET IAAVIQPKVG NYLVFFPSYE YLQEVILRFR VQNPSVKVIQ QTLGMLEEER ENFLADFMKH PEQTLVGFAL MGGIFGEGID LLGDRLSGAI IVGVGLPQIG FEREIIRAYY EKVSHEGFEF AYMYPGINKV LQAVGRVIRT ENDRGIVLLI DERFAQWKYK KLLPPEWKNI HYMTNTKAVR ESVGKFWTET VH // ID I4YAD1_WALMC Unreviewed; 776 AA. AC I4YAD1; DT 05-SEP-2012, integrated into UniProtKB/TrEMBL. DT 05-SEP-2012, sequence version 1. DT 11-MAY-2016, entry version 23. DE SubName: Full=DNA repair helicase {ECO:0000313|EMBL:EIM20923.1}; GN ORFNames=WALSEDRAFT_60641 {ECO:0000313|EMBL:EIM20923.1}; OS Wallemia mellicola (strain ATCC MYA-4683 / CBS 633.66) (Wallemia sebi OS (CBS 633.66)). OC Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; OC Wallemiomycetes; Wallemiales; Wallemiales incertae sedis; Wallemia. OX NCBI_TaxID=671144 {ECO:0000313|EMBL:EIM20923.1, ECO:0000313|Proteomes:UP000005242}; RN [1] {ECO:0000313|EMBL:EIM20923.1, ECO:0000313|Proteomes:UP000005242} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC MYA-4683 / CBS 633.66 {ECO:0000313|Proteomes:UP000005242}; RX PubMed=22326418; DOI=10.1016/j.fgb.2012.01.007; RA Padamsee M., Kumar T.K.A., Riley R., Binder M., Boyd A., Calvo A.M., RA Furukawa K., Hesse C., Hohmann S., James T.Y., LaButti K., Lapidus A., RA Lindquist E., Lucas S., Miller K., Shantappa S., Grigoriev I.V., RA Hibbett D.S., McLaughlin D.J., Spatafora J.W., Aime M.C.; RT "The genome of the xerotolerant mold Wallemia sebi reveals adaptations RT to osmotic stress and suggests cryptic sexual reproduction."; RL Fungal Genet. Biol. 49:217-226(2012). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; JH668235; EIM20923.1; -; Genomic_DNA. DR RefSeq; XP_006958921.1; XM_006958859.1. DR EnsemblFungi; EIM20923; EIM20923; WALSEDRAFT_60641. DR GeneID; 18474070; -. DR KEGG; wse:WALSEDRAFT_60641; -. DR InParanoid; I4YAD1; -. DR KO; K10844; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000005242; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EIM20923.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000005242}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EIM20923.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EIM20923.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EIM20923.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000005242}. FT DOMAIN 1 245 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 217 252 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 776 AA; 87545 MW; 9287C48F17750E8B CRC64; MPSGTGKTVS LLSLIVAYQQ HYDADRKLVY CSRTVPEIEK ALAELKRLMA YRADQGYAAK DSGYIGLGLS SRKNLCLHPS ISQERRGKAV DARCRDLTSA HAVQKGRSDP GSHELCSYHE GLSEVAPGEI VPPGIWTIED VKKFGQQKGY CPYFSVRRMV PFCNTIIYSF HYLLDPKVAE MVSREMSKDA IVVFDEAHNI DNVCIESLSI DLTRPMLESA SRSVDKLSEK IAEVKENDAQ RLQDEYAKLV EGMQDADQPP PAANDEMAMI RRQDEDVLSN PVLPADLLKE AIPGNIRKAE HFVSFLKRFV EYLKTRMRVL HVVAETPLSF LQHLRDITYI ERKPLRFCSD RLSNLIKTLE LERLDEYSAL QSVAAFATLV STYEKGFLLI LEPFESETAT IPNPIFHLTC QDASIAIAPV FERFSSVIIT SGTISPLDMY PKMLNFNAIV QESYPMTLSR NCFIPMVITR GSDQVAVSSR FEVRNDPAVV RNYGQMLIEY SKVIPDGIVA FFPSYLYMES IVSAWNEMQI LDEVWKHKLI FVETPDAPET SIALENFRKA CDNGRGAVML SVARGKVSEG IDFDHHFGRA VIMFGVPYQY TESRILKARL EYLRDNHRIR ESDFLTFDAM RHAAQCVGRV LRGKSDYGLM IFADKRFARS DKRAKLPRWI NQYISETSSN LSTDMAISLA KRFVRTMAQP FDHSQTGVSL WTMDHVLERQ RLDKESDLAA IANNENDYIP MEVDGDGSGG DSDDDDIDGG INDNALMDIP MPVAAN // ID I6T0N3_ENTHA Unreviewed; 782 AA. AC I6T0N3; DT 03-OCT-2012, integrated into UniProtKB/TrEMBL. DT 03-OCT-2012, sequence version 1. DT 11-MAY-2016, entry version 21. DE SubName: Full=Helicase {ECO:0000313|EMBL:AFM71402.1}; GN OrderedLocusNames=EHR_12685 {ECO:0000313|EMBL:AFM71402.1}; OS Enterococcus hirae (strain ATCC 9790 / DSM 20160 / JCM 8729 / LMG 6399 OS / NBRC 3181 / NCIMB 6459 / NCDO 1258). OC Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; OC Enterococcus. OX NCBI_TaxID=768486 {ECO:0000313|EMBL:AFM71402.1, ECO:0000313|Proteomes:UP000002895}; RN [1] {ECO:0000313|EMBL:AFM71402.1, ECO:0000313|Proteomes:UP000002895} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 9790 / DSM 20160 / JCM 8729 / LMG 6399 / NBRC 3181 / NCIMB RC 6459 / NCDO 1258 {ECO:0000313|Proteomes:UP000002895}; RX PubMed=22933757; DOI=10.1128/JB.01075-12; RA Gaechter T., Wunderlin C., Schmidheini T., Solioz M.; RT "Genome sequence of Enterococcus hirae (Streptococcus faecalis) ATCC RT 9790, a model organism for the study of ion transport, bioenergetics, RT and copper homeostasis."; RL J. Bacteriol. 194:5126-5127(2012). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP003504; AFM71402.1; -; Genomic_DNA. DR EnsemblBacteria; AFM71402; AFM71402; EHR_12685. DR KEGG; ehr:EHR_12685; -. DR BioCyc; EHIR768486:GLCW-2477-MONOMER; -. DR Proteomes; UP000002895; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 4. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR014001; Helicase_ATP-bd. DR InterPro; IPR001650; Helicase_C. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF00270; DEAD; 1. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00487; DEXDc; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 5. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. DR PROSITE; PS51194; HELICASE_CTER; 1. PE 4: Predicted; KW ATP-binding {ECO:0000313|EMBL:AFM71402.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000002895}; KW Helicase {ECO:0000313|EMBL:AFM71402.1}; KW Hydrolase {ECO:0000313|EMBL:AFM71402.1}; KW Nucleotide-binding {ECO:0000313|EMBL:AFM71402.1}; KW Reference proteome {ECO:0000313|Proteomes:UP000002895}. FT DOMAIN 180 431 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT DOMAIN 584 771 Helicase C-terminal. FT {ECO:0000259|PROSITE:PS51194}. SQ SEQUENCE 782 AA; 91767 MW; 35F18780D511F32D CRC64; MKQSKISVRN LVEFILRRGS IDNRKKSNHT ALEGAKIHRK LQKDAGEDYE KEVFLKTTVH FEEYQLIIEG RADGVFQKEG IYYIDEIKTS EPRYEDLEKE QIELFFHQAR TYAYIYCHEH DLKEINLQLT YYQTTEGIIT RKVEHQTIEQ LNEFFKKLTD DYKEWLIFQE NWRTVRNASL MALKFPYDNY RKGQRELAVA AYKTIRTKQK LFVEAPTGTG KTVSTLFPAL KAIGEEEGER IFYLTAKTIT RQVAEDALEA LKDVGAETKS VTLTAKDKIC FLDETTCNPD QCPYANGYYN RINEGLWDLL NHENQITREV IETYAKKHTL CPFELSLDVS LWCDVIIGDY NYLFDPTVYL RRFFEGEKNE DHLFLIDEAH NLVSRSREMY SAKLSYRSAR NVYALIPKEF KKLRRRFNKL LKAFDQIQEI SNEDGWTYHH QKAPADTLVN AGYQLSEHIQ EWLAEYPEHA IQETLLPFYF DLLHFLKISE FYDDHYETTV EKTYQDFVIK AFCIDPSDFL EQSLAKGRSS ILFSASFSPL SYYQETLGGK ESLAYRLPSP FPEENQKVLI TNYLETTYRK REENMPRLIE TIQHFTKEKI GNYLIFFPSY QYLDQAVTAF QEKHPDVKVL IQDTMMSEIE RETFLKQFQI DPDETLLAFC VLGGIFSEGI DLKGTRLIGS MIVGVGLPQM NHEQELIKEY YDEKDQLGFA YAYQLPGMNK VLQAAGRVIR DASDQGIVLL ADQRFNRLDY RQLFPRHWQS ATTVRNLSEL TTEITDFWHK SK // ID I7M2Q2_TETTS Unreviewed; 842 AA. AC I7M2Q2; DT 03-OCT-2012, integrated into UniProtKB/TrEMBL. DT 16-APR-2014, sequence version 2. DT 11-MAY-2016, entry version 25. DE SubName: Full=DNA repair helicase {ECO:0000313|EMBL:EAS01088.2}; GN ORFNames=TTHERM_00316410 {ECO:0000313|EMBL:EAS01088.2}; OS Tetrahymena thermophila (strain SB210). OC Eukaryota; Alveolata; Ciliophora; Intramacronucleata; OC Oligohymenophorea; Hymenostomatida; Tetrahymenina; Tetrahymenidae; OC Tetrahymena. OX NCBI_TaxID=312017 {ECO:0000313|EMBL:EAS01088.2, ECO:0000313|Proteomes:UP000009168}; RN [1] {ECO:0000313|Proteomes:UP000009168} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=SB210 {ECO:0000313|Proteomes:UP000009168}; RX PubMed=16933976; DOI=10.1371/journal.pbio.0040286; RA Eisen J.A., Coyne R.S., Wu M., Wu D., Thiagarajan M., Wortman J.R., RA Badger J.H., Ren Q., Amedeo P., Jones K.M., Tallon L.J., Delcher A.L., RA Salzberg S.L., Silva J.C., Haas B.J., Majoros W.H., Farzad M., RA Carlton J.M., Smith R.K. Jr., Garg J., Pearlman R.E., Karrer K.M., RA Sun L., Manning G., Elde N.C., Turkewitz A.P., Asai D.J., Wilkes D.E., RA Wang Y., Cai H., Collins K., Stewart B.A., Lee S.R., Wilamowska K., RA Weinberg Z., Ruzzo W.L., Wloga D., Gaertig J., Frankel J., Tsao C.-C., RA Gorovsky M.A., Keeling P.J., Waller R.F., Patron N.J., Cherry J.M., RA Stover N.A., Krieger C.J., del Toro C., Ryder H.F., Williamson S.C., RA Barbeau R.A., Hamilton E.P., Orias E.; RT "Macronuclear genome sequence of the ciliate Tetrahymena thermophila, RT a model eukaryote."; RL PLoS Biol. 4:1620-1642(2006). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GG662605; EAS01088.2; -; Genomic_DNA. DR RefSeq; XP_001021333.2; XM_001021333.2. DR EnsemblProtists; EAS01088; EAS01088; TTHERM_00316410. DR GeneID; 7829725; -. DR KEGG; tet:TTHERM_00316410; -. DR InParanoid; I7M2Q2; -. DR KO; K10844; -. DR Proteomes; UP000009168; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EAS01088.2}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000009168}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EAS01088.2}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EAS01088.2}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EAS01088.2}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000009168}. FT DOMAIN 7 292 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 771 802 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 842 AA; 97889 MW; F11882A1EDE78B1F CRC64; MKFKIDELDV YFPYPTVYKE QLEYMKELKK ILDNHGHGII EMPTGTGKTV SLLALITSYL ESNQDKFKKL IYCTRTVVEM EKTIEEVKFI LDNRKQEKPE EQFKFLCTGL SARSNLCIHP NVSRQQSRDR VDAECKKLTA PWVRAQSFEK SSRGDSDQLE LCQLFENFEG KKEELKFTEG IYNLEDLRQY GEKNNICPYF LARRLLNQSN IIVYNYMYML DAKMTEILDK EFWKDCLVVF DEAHNIDNVC LEVFTVDINR KLLDMAYKNI EVLGTKVDRV ETINHEKLES EYNQLLQGLK NKGVLNDNQL NENSKQLPSE LTAESIPFHI KKAKPFIQFL KKIVIFLKNR LKEKNATTQD PPQFINDMYI SSHLDSYSLK LAGERLNMLL NSLEITETDE FSAIDTITHF TSLLASYARG FKIIYQPNPK DGSLNDPLMT FACLDCSLAM THVFTQFKSV ILTSGTMSPL DIYPKILNFN PYTVKSIDIE LTRNSIQPLI ATKGIDFTQL SSEYEARANM TVTRSYGSLL IDLSKFVPDG IVAFFPSYMY MEKIIYEWNQ EGILDEMRKY KLLYFESKDV AQTSQSLFHY RKACDCGRGA IFFSIARGKI AEGIDFNEHY GRAVVMVGFP VQNSKDPILI ERCKYLTENF KITKNEYIEF DAMRQTAQCL GRVMRGKTDY GIMIMAEKRF ARSLVKSKLP NWIKKQMPDC NVDISVDITS ILTEQFFKKM GKAFELDRKS YFTQEQFEEI DKLNQDNKME AEKLITGSST KDQMEEEKDQ KEKEALQELH KIKKNKQILE KEEQEPKVEK TKPAPKNKRT TKQSNNTSQP NNLKTQKKRK TK // ID I8RBQ7_9FIRM Unreviewed; 778 AA. AC I8RBQ7; DT 03-OCT-2012, integrated into UniProtKB/TrEMBL. DT 03-OCT-2012, sequence version 1. DT 11-MAY-2016, entry version 16. DE SubName: Full=Helicase c2 {ECO:0000313|EMBL:EIW16478.1}; GN ORFNames=FB4_0989 {ECO:0000313|EMBL:EIW16478.1}; OS Pelosinus fermentans B4. OC Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; OC Pelosinus. OX NCBI_TaxID=1149862 {ECO:0000313|EMBL:EIW16478.1, ECO:0000313|Proteomes:UP000004324}; RN [1] {ECO:0000313|EMBL:EIW16478.1, ECO:0000313|Proteomes:UP000004324} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=B4 {ECO:0000313|EMBL:EIW16478.1}; RX PubMed=22933770; DOI=10.1128/JB.01174-12; RA Brown S.D., Podar M., Klingeman D.M., Johnson C.M., Yang Z.K., RA Utturkar S.M., Land M.L., Mosher J.J., Hurt R.A.Jr., Phelps T.J., RA Palumbo A.V., Arkin A.P., Hazen T.C., Elias D.A.; RT "Draft Genome Sequences for Two Metal-Reducing Pelosinus fermentans RT Strains Isolated from a Cr(VI)-Contaminated Site and for Type Strain RT R7."; RL J. Bacteriol. 194:5147-5148(2012). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:EIW16478.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AKVJ01000066; EIW16478.1; -; Genomic_DNA. DR RefSeq; WP_007937579.1; NZ_AKVJ01000066.1. DR EnsemblBacteria; EIW16478; EIW16478; FB4_0989. DR Proteomes; UP000004324; Unassembled WGS sequence. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000313|EMBL:EIW16478.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000004324}; KW Helicase {ECO:0000313|EMBL:EIW16478.1}; KW Hydrolase {ECO:0000313|EMBL:EIW16478.1}; KW Nucleotide-binding {ECO:0000313|EMBL:EIW16478.1}; KW Reference proteome {ECO:0000313|Proteomes:UP000004324}. FT DOMAIN 182 443 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 778 AA; 89839 MW; 80344B15DCFCF8A1 CRC64; MTTDVVRISV KNLVEYTLRS GDIDTRFVGT SRAVEGTRIH QKLQKAGGDK YLAEAQLKYE MNYKEFLFLV EGRADGIIIE DPQVVIDEIK TTAVPLERID ENFNPLHWAQ AKCYGLIYGE QNDVEQLEIQ LTYYNIDTDE IKRIRETVTL QELQTFFCGL LDIYLVWAKH LKEWNEMRDS SIKKLNFPFA TYRQGQRELA VSVYKIISDN KKLFVQAPTG IGKTISTLFP AVKAMGENKT SKIFYLTAKT ITRQVAEEAV NAMRECGLDF KSITITAKDK ICFQEKAICN PDHCKYAKGH FDRVNDAIMD IFLKERAFTR EVIEAYSREH MVCPFELSLD LSMWADCIIC DYNYVFDPRV YLKRFFQTSQ GDYTFLIDEA HNLVDRAREM FSAELTKSSF LKVKNLFKGH SIGKTLGKIN TVMLGMRKEC SEEGYYTQLQ QPEEIYPLLW TFVNKAPALL TDNHKTEGYD ALLELYFNVL IFLKMVELYD DHYITYVEKS SSEVTLKLFC LDPSKLLGEA VKRGKSSVFF SATLAPLDYF CEILGGETVD AKIAFPSPFK TENLCLLVAD QISTKFKDRE SSYGEIAHYI HLVIQQKTGN YLIFFPSYHY MQEVHHVFAE LYPDTETMIQ TNVMSEEERE SFLDRFQPNR NRMLAGFCVL GGIFSEGIDL KGDKLLGTVI IGVGLPQICI ERNLIMEHFK KKNELGYEYA YMYPGMNKVL QAAGRVIRSE EDKGVVLLID ARFSSYYYKK LFPAHWRYPK EVRNGSKLNA LIQSFWDK // ID J0E0I5_LOALO Unreviewed; 705 AA. AC J0E0I5; DT 03-OCT-2012, integrated into UniProtKB/TrEMBL. DT 03-OCT-2012, sequence version 1. DT 11-MAY-2016, entry version 25. DE SubName: Full=Ercc2 protein {ECO:0000313|EMBL:EJD76012.1}; GN ORFNames=LOAG_16970 {ECO:0000313|EMBL:EJD76012.1}; OS Loa loa (Eye worm) (Filaria loa). OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Spirurida; OC Filarioidea; Onchocercidae; Loa. OX NCBI_TaxID=7209 {ECO:0000313|EMBL:EJD76012.1, ECO:0000313|Proteomes:UP000007040}; RN [1] {ECO:0000313|Proteomes:UP000007040} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RG The Broad Institute Genome Sequencing Platform; RA Nutman T.B., Fink D.L., Russ C., Young S., Zeng Q., Koehrsen M., RA Alvarado L., Berlin A., Borenstein D., Chapman S.B., Chen Z., RA Engels R., Freedman E., Gellesch M., Goldberg J., Griggs A., Gujja S., RA Heilman E.R., Heiman D., Hepburn T., Howarth C., Jen D., Larson L., RA Lewis B., Mehta T., Park D., Pearson M., Richards J., Roberts A., RA Saif S., Shea T., Shenoy N., Sisk P., Stolte C., Sykes S., Walk T., RA White J., Yandava C., Haas B., Henn M.R., Nusbaum C., Birren B.; RT "The genome sequence of Loa loa."; RL Submitted (SEP-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; JH712096; EJD76012.1; -; Genomic_DNA. DR EnsemblMetazoa; EJD76012.1; EJD76012.1; LOAG_16970. DR InParanoid; J0E0I5; -. DR OMA; DEVWKYK; -. DR Proteomes; UP000007040; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000007040}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000007040}; KW Signal {ECO:0000256|SAM:SignalP}. FT SIGNAL 1 17 {ECO:0000256|SAM:SignalP}. FT CHAIN 18 705 {ECO:0000256|SAM:SignalP}. FT /FTId=PRO_5003732804. FT DOMAIN 1 243 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 705 AA; 80089 MW; 2B461B26FBD050A3 CRC64; MPSGTGKTVS LLSLVVAYML RFPDHLDKLV YCSRTIPEIE KCVEELRNLF KYYEQCDGKP PSLFAVALSA RKNLCINESV SSLRQGSLVD GACQKLTASF VRAKRKLRPD LPCCTFFEKL DEQEDFNHLD GVYNLQNLRK LGQQNGICPY FLSRNVVDRA HIVVYSYHYI LDPKIAELVS KNFSRHSCVV FDEAHNIDNV CIESMSVSLT KTTVEKATQK LGILEEHVQR LREENSEQLR VEYDRLVEGL KRVEEERTND QVLANPVLPD MILKEAVPGT IRNALHFISF LRRFNEYLKH RMRTKTVLIE NPAAFLRDIN DLMHIDRRPL RFCAERFASL TRTLELADIS DFSSLVLITN FATLVSTYAR GFTIVIEPLD EKSGIGHSCT LHLSCMDASV AIRPIFQRYR TVVITSGTLS PLDMYPKILD FDPAVMASLS MTLARPCIAP LIVSKGNDQV AMTSRFESRE DAAVIRNYGS LVLELVSLVP DGVVVFLPGI IDELLKYKLL FIETTDALET SIALEKYVEA CDCGRGAVFF SVARGKVSEG IDFSHHLGRA VIMLGVPYVY TESRILRARL EYLREQLGIR ENDFLTFDAM RQAAQCMGRA LRGKSDYGLM IFADKRFSRK DKMGKLPRWI QEYITPGNVN LSIEEAAIIA RKWFPLMAQS FTKDHQLGIS LLTEEMLREK ELLGKKFGHV LEEID // ID J1L238_9EURY Unreviewed; 669 AA. AC J1L238; DT 03-OCT-2012, integrated into UniProtKB/TrEMBL. DT 03-OCT-2012, sequence version 1. DT 11-MAY-2016, entry version 19. DE SubName: Full=DEAD_2 domain protein {ECO:0000313|EMBL:EJG07107.1}; GN ORFNames=Metli_1150 {ECO:0000313|EMBL:EJG07107.1}; OS Methanofollis liminatans DSM 4140. OC Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; OC Methanomicrobiaceae; Methanofollis. OX NCBI_TaxID=28892 {ECO:0000313|EMBL:EJG07107.1, ECO:0000313|Proteomes:UP000005095}; RN [1] {ECO:0000313|EMBL:EJG07107.1, ECO:0000313|Proteomes:UP000005095} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=DSM 4140 {ECO:0000313|EMBL:EJG07107.1, RC ECO:0000313|Proteomes:UP000005095}; RG US DOE Joint Genome Institute (JGI-PGF); RA Lucas S., Han J., Lapidus A., Bruce D., Goodwin L., Pitluck S., RA Peters L., Kyrpides N., Mavromatis K., Ivanova N., Mikhailova N., RA Lu M., Detter J.C., Tapia R., Han C., Land M., Hauser L., RA Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Spring S., RA Schuler E., Brambilla E., Klenk H.-P., Eisen J.A.; RT "The complete genome of Methanofollis liminatans DSM 4140."; RL Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CM001555; EJG07107.1; -; Genomic_DNA. DR RefSeq; WP_004038781.1; NZ_CM001555.1. DR EnsemblBacteria; EJG07107; EJG07107; Metli_1150. DR Proteomes; UP000005095; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW Complete proteome {ECO:0000313|Proteomes:UP000005095}; KW Reference proteome {ECO:0000313|Proteomes:UP000005095}. FT DOMAIN 3 308 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 669 AA; 74783 MW; FC0D0BE7745BC2A1 CRC64; MDRLEAWFPY PGFRPNQREM LEFAAETARE GGIAMIDAPT GSGKSSVVSA LLAESNGRKV IVAVRTISQL STFIRELALV RKVQPALTFS YLVGKGSMCP LGGEGDPYRR CEGVKAFSSS LMRERAQKGS LVPTEDRVIN EQIRKMDREH PLLCPYFIKS RVFVRGDEES GLRMAPSQTL RTRADRVKKE AIAPEDLAGF CNGLCPYETM MQAARGADVL VCNFHHLFND EIRDQLYASL DVEPKDVLLL IDEAHNCGDV VTGIQSVVLE DRTLEAAMTE LSHLSRSMKD VNAVRQVLPN VAAFMEALQR SQKGEDWFDP EQFHRMAVRG TLYKGLEEIV GDLSKIAERV SEKNKSAGIY KESAVESLTE FMYRVYRAGS DMTFLPLYRS AEGHVELEVR NIDPGEKMQA IGKAHAACVL ISGTLSPLSA YQKYYFGDLP VRTISLPNSF PRENRLVVCA KDVTTAYRMR QNKKNTDAIV GYIKTFARVR GNLAVYFPSY QILNTYAQAC GSRINGKTVY TEPREASEAT AALQEFISLP ERGKAGIIFA VCGGKWSEGL DYRGEMLRGA MVVGLPLAPY NSVRKMTIEY YVHKFGRDGE FISYTLPAIN RALQALGRVL RTPEDTGVLV LAEERFLEPG VRVGLPPWMQ DEAEICDLDR FSRLVMKWA // ID J3KB80_COCIM Unreviewed; 795 AA. AC J3KB80; DT 03-OCT-2012, integrated into UniProtKB/TrEMBL. DT 27-MAY-2015, sequence version 2. DT 11-MAY-2016, entry version 18. DE SubName: Full=DNA repair helicase rad15 {ECO:0000313|EMBL:EAS32353.3}; GN ORFNames=CIMG_03377 {ECO:0000313|EMBL:EAS32353.3}; OS Coccidioides immitis (strain RS) (Valley fever fungus). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; OC Eurotiomycetidae; Onygenales; Onygenales incertae sedis; Coccidioides. OX NCBI_TaxID=246410 {ECO:0000313|EMBL:EAS32353.3, ECO:0000313|Proteomes:UP000001261}; RN [1] {ECO:0000313|Proteomes:UP000001261} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=RS {ECO:0000313|Proteomes:UP000001261}; RX PubMed=19717792; DOI=10.1101/gr.087551.108; RA Sharpton T.J., Stajich J.E., Rounsley S.D., Gardner M.J., RA Wortman J.R., Jordar V.S., Maiti R., Kodira C.D., Neafsey D.E., RA Zeng Q., Hung C.-Y., McMahan C., Muszewska A., Grynberg M., RA Mandel M.A., Kellner E.M., Barker B.M., Galgiani J.N., Orbach M.J., RA Kirkland T.N., Cole G.T., Henn M.R., Birren B.W., Taylor J.W.; RT "Comparative genomic analyses of the human fungal pathogens RT Coccidioides and their relatives."; RL Genome Res. 19:1722-1731(2009). RN [2] {ECO:0000313|Proteomes:UP000001261} RP GENOME REANNOTATION. RC STRAIN=RS {ECO:0000313|Proteomes:UP000001261}; RX PubMed=20516208; DOI=10.1101/gr.103911.109; RA Neafsey D.E., Barker B.M., Sharpton T.J., Stajich J.E., Park D.J., RA Whiston E., Hung C.-Y., McMahan C., White J., Sykes S., Heiman D., RA Young S., Zeng Q., Abouelleil A., Aftuck L., Bessette D., Brown A., RA FitzGerald M., Lui A., Macdonald J.P., Priest M., Orbach M.J., RA Galgiani J.N., Kirkland T.N., Cole G.T., Birren B.W., Henn M.R., RA Taylor J.W., Rounsley S.D.; RT "Population genomic sequencing of Coccidioides fungi reveals recent RT hybridization and transposon control."; RL Genome Res. 20:938-946(2010). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GG704916; EAS32353.3; -; Genomic_DNA. DR RefSeq; XP_001243936.2; XM_001243935.2. DR EnsemblFungi; EAS32353; EAS32353; CIMG_03377. DR GeneID; 4564171; -. DR KEGG; cim:CIMG_03377; -. DR EuPathDB; FungiDB:CIMG_03377; -. DR KO; K10844; -. DR OrthoDB; EOG776T4Q; -. DR Proteomes; UP000001261; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EAS32353.3}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000001261}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EAS32353.3}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EAS32353.3}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EAS32353.3}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000001261}. FT DOMAIN 7 287 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 277 300 {ECO:0000256|SAM:Coils}. FT COILED 738 762 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 795 AA; 90839 MW; 25630255E581AD50 CRC64; MKFFIDDLPV LFPYPRIYPE QYAYICDLKK TLDVGGHCVL EMPSGTGKTV SLLSLIIAYQ QHYPSHRKLI YCSRTMSEIE KALTELRELM KYREQQLGYT EDFRALGLTS RKNLCLHPSV RREKSGTVVD ARCRSLTASF VKERKEKGED VELCLYHENL DLLEPSNLVP PGVFTLDGLI RYGEQHKQCP YFSARRMMPF CNVIIYSYHY LLDPKIAERV SKELSKDCIV VFDEAHNIDN VCIESLSIDI TEDSLRKAGR GANNLGHKID EMKRSDAAKL QKEYEKLVEG LREADQAREE DQLMANPALP DDLLKEAVPG NIRRAEHFVA FLKRFIEYLK TRMKVLHAIS ETPLSFLSHL KDLTYIERKP LRFCAERLTS LVRTLELMNI EEYRPLQEIA TFATLVSTYE KGFLLILEPF ESDTATVPNP VLHFTCLDAA IAIKPVFERF GSVIITSGTL SPLEMYPKML GFQTVLQESY SMTLARRSFL PMIVTRGSDQ AQISSAFKIR NDPGVVRNYG NLLLEFSRIT PDGIVVFFPS YLYMESIISM WQGMGILDSI WNYKLILVET PDSQESSLAL ETYRTACCNG RGAILLCVAR GKVSEGIDFD HHYGRAVLCI GVPFQYTESP ILKARLRFML ENYRIREDDF LSFDAMRHAA QCLGRVLRGK DDYGIMVLAD RRFQKKRNQL PKWISQNILE SETNLSTDMA VATAKSFLRT MAQPFKAKDQ EGISTWSLAD LERHLEKQKG EAEKKYQEAN QRDAALPAAN GANNNGDLEM YDDGIDEDLM MLDAE // ID J3M3X5_ORYBR Unreviewed; 758 AA. AC J3M3X5; DT 03-OCT-2012, integrated into UniProtKB/TrEMBL. DT 03-OCT-2012, sequence version 1. DT 11-MAY-2016, entry version 29. DE SubName: Full=Uncharacterized protein {ECO:0000313|EnsemblPlants:OB05G12990.1}; GN Name=OB05G12990 {ECO:0000313|EnsemblPlants:OB05G12990.1}; OS Oryza brachyantha. OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza. OX NCBI_TaxID=4533 {ECO:0000313|EnsemblPlants:OB05G12990.1}; RN [1] {ECO:0000313|EnsemblPlants:OB05G12990.1} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=IRGC 101232 {ECO:0000313|EnsemblPlants:OB05G12990.1}; RX PubMed=23481403; RA Chen J., Huang Q., Gao D., Wang J., Lang Y., Liu T., Li B., Bai Z., RA Luis Goicoechea J., Liang C., Chen C., Zhang W., Sun S., Liao Y., RA Zhang X., Yang L., Song C., Wang M., Shi J., Liu G., Liu J., Zhou H., RA Zhou W., Yu Q., An N., Chen Y., Cai Q., Wang B., Liu B., Min J., RA Huang Y., Wu H., Li Z., Zhang Y., Yin Y., Song W., Jiang J., RA Jackson S.A., Wing R.A., Wang J., Chen M.; RT "Whole-genome sequencing of Oryza brachyantha reveals mechanisms RT underlying Oryza genome evolution."; RL Nat. Commun. 4:1595-1595(2013). RN [2] {ECO:0000313|EnsemblPlants:OB05G12990.1} RP IDENTIFICATION. RG EnsemblPlants; RL Submitted (APR-2013) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR RefSeq; XP_006654036.1; XM_006653973.2. DR STRING; 4533.OB05G12990.1; -. DR EnsemblPlants; OB05G12990.1; OB05G12990.1; OB05G12990. DR GeneID; 102714290; -. DR Gramene; OB05G12990.1; OB05G12990.1; OB05G12990. DR KEGG; obr:102714290; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR Proteomes; UP000006038; Chromosome 5. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0000724; P:double-strand break repair via homologous recombination; IEA:EnsemblPlants. DR GO; GO:0010286; P:heat acclimation; IEA:EnsemblPlants. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR GO; GO:0045893; P:positive regulation of transcription, DNA-templated; IEA:EnsemblPlants. DR GO; GO:0043687; P:post-translational protein modification; IEA:EnsemblPlants. DR GO; GO:0006457; P:protein folding; IEA:EnsemblPlants. DR GO; GO:0009644; P:response to high light intensity; IEA:EnsemblPlants. DR GO; GO:0042542; P:response to hydrogen peroxide; IEA:EnsemblPlants. DR GO; GO:0010212; P:response to ionizing radiation; IEA:EnsemblPlants. DR GO; GO:0009411; P:response to UV; IEA:EnsemblPlants. DR GO; GO:0000394; P:RNA splicing, via endonucleolytic cleavage and ligation; IEA:EnsemblPlants. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:EnsemblPlants. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000006038}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000006038}. FT DOMAIN 7 288 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 758 AA; 85661 MW; 46A22CCC569842B7 CRC64; MKFDLEGLTV HFPYAAIYPE QHAYMGELKR ALDARGHALL EMPTGTGKTA ALISLITSYS LANPSRPLRL IYCTRTVHEM EKTLAELRLL FAHLPPAASR SLLALGLSSR KNLCVHPQAS AAAARDSVDT ACRRLTASWV RDKAASDPDS TPLCDFFESF DRAATAGDLA SYMPPGVYTL ADLRALGRDR RICPYFLARQ MVKYANVVVY SYQYLIDPKV SSIVSREMQK ECVVVFDEAH NIDNVCIEAL SVSIRKQTLE GAERNLRRIS HEIDRFKATD ANRLRAEYNR LVDGLAQRGN LPISDTWLAN PALPDDILKE AVPGNIRRAE HFLAVLRRLV RFLDGRLDTE NVENEMPVAF VASIHSQAGI DQKMLRFCYD RLHSLMLTLE ITDTDEFMHI QTICDFATLI GTYTRGFSII IEPYDERMPD IRDPVIQLSC HDASLAIQPV FERFQTVVIT SGTLSPIDLY PRLLNFNPVI SRSFTMSLTR DCICPMVLTR GSDQLPVSTK FDMRSDPGVV RNYGRLLLEM AAAVPDGIVC FFVSYSYMDG IVNSWNEMGI LQDIMQHKLV FIETPDVVET TLALDNYRKA CDCGRGAIFF SVARGKVAEG IDFDRHYGRL VIMFGVPFQY TLSRILLARL EYLRETFQIK EGDFLTFDAL RQAAQCVGRV IRSKADYGMM IFADKRYSRH DKRSKLPGWI LSHLHDAHLN LSTDMALHIA REFLRRMAQP YDKTGSGGSK TLLTEEDLQK MAQDAMEM // ID J3PA33_GAGT3 Unreviewed; 791 AA. AC J3PA33; DT 03-OCT-2012, integrated into UniProtKB/TrEMBL. DT 03-OCT-2012, sequence version 1. DT 11-MAY-2016, entry version 28. DE SubName: Full=DNA repair helicase rad15 {ECO:0000313|EMBL:EJT73519.1}; DE SubName: Full=Uncharacterized protein {ECO:0000313|EnsemblFungi:GGTG_10356T0}; GN Name=GGTG_10356 {ECO:0000313|EnsemblFungi:GGTG_10356T0}; GN ORFNames=GGTG_10356 {ECO:0000313|EMBL:EJT73519.1}; OS Gaeumannomyces graminis var. tritici (strain R3-111a-1) (Wheat and OS barley take-all root rot fungus). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; OC Sordariomycetes; Sordariomycetidae; Magnaporthales; Magnaporthaceae; OC Gaeumannomyces. OX NCBI_TaxID=644352; RN [1] {ECO:0000313|EnsemblFungi:GGTG_10356T0} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=R3-111a-1 {ECO:0000313|EnsemblFungi:GGTG_10356T0}; RG The Broad Institute Genome Sequencing Platform; RA Ma L.-J., Dead R., Young S., Zeng Q., Koehrsen M., Alvarado L., RA Berlin A., Chapman S.B., Chen Z., Freedman E., Gellesch M., RA Goldberg J., Griggs A., Gujja S., Heilman E.R., Heiman D., Hepburn T., RA Howarth C., Jen D., Larson L., Mehta T., Neiman D., Pearson M., RA Roberts A., Saif S., Shea T., Shenoy N., Sisk P., Stolte C., Sykes S., RA Walk T., White J., Yandava C., Haas B., Nusbaum C., Birren B.; RT "The genome sequence of Gaeumannomyces graminis var. tritici strain RT R3-111a-1."; RL Submitted (JUL-2010) to the EMBL/GenBank/DDBJ databases. RN [2] {ECO:0000313|EMBL:EJT73519.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=R3-111a-1 {ECO:0000313|EMBL:EJT73519.1}; RG The Broad Institute Genome Sequencing Platform; RG Broad Institute Genome Sequencing Center for Infectious Disease; RA Ma L.-J., Dead R., Young S., Zeng Q., Koehrsen M., Alvarado L., RA Berlin A., Chapman S.B., Chen Z., Freedman E., Gellesch M., RA Goldberg J., Griggs A., Gujja S., Heilman E.R., Heiman D., Hepburn T., RA Howarth C., Jen D., Larson L., Mehta T., Neiman D., Pearson M., RA Roberts A., Saif S., Shea T., Shenoy N., Sisk P., Stolte C., Sykes S., RA Walk T., White J., Yandava C., Haas B., Nusbaum C., Birren B.; RL Submitted (JUL-2010) to the EMBL/GenBank/DDBJ databases. RN [3] {ECO:0000313|EMBL:EJT73519.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=R3-111a-1 {ECO:0000313|EMBL:EJT73519.1}; RG The Broad Institute Genome Sequencing Platform; RA Ma L.-J., Dead R., Young S.K., Zeng Q., Gargeya S., Fitzgerald M., RA Haas B., Abouelleil A., Alvarado L., Arachchi H.M., Berlin A., RA Brown A., Chapman S.B., Chen Z., Dunbar C., Freedman E., Gearin G., RA Gellesch M., Goldberg J., Griggs A., Gujja S., Heiman D., Howarth C., RA Larson L., Lui A., MacDonald P.J.P., Mehta T., Montmayeur A., RA Murphy C., Neiman D., Pearson M., Priest M., Roberts A., Saif S., RA Shea T., Shenoy N., Sisk P., Stolte C., Sykes S., Yandava C., RA Wortman J., Nusbaum C., Birren B.; RT "Annotation of Gaeumannomyces graminis var. tritici R3-111a-1."; RL Submitted (SEP-2010) to the EMBL/GenBank/DDBJ databases. RN [4] {ECO:0000313|EnsemblFungi:GGTG_10356T0} RP IDENTIFICATION. RC STRAIN=R3-111a-1 {ECO:0000313|EnsemblFungi:GGTG_10356T0}; RG EnsemblFungi; RL Submitted (JUN-2015) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ADBI01000840; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; GL385399; EJT73519.1; -; Genomic_DNA. DR RefSeq; XP_009226493.1; XM_009228229.1. DR EnsemblFungi; GGTG_10356T0; GGTG_10356T0; GGTG_10356. DR GeneID; 20350814; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000006039; Unassembled WGS sequence. DR GO; GO:0005829; C:cytosol; IEA:EnsemblFungi. DR GO; GO:0000112; C:nucleotide-excision repair factor 3 complex; IEA:EnsemblFungi. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0000717; P:nucleotide-excision repair, DNA duplex unwinding; IEA:EnsemblFungi. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EJT73519.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000006039}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EJT73519.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EJT73519.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EJT73519.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000006039}. FT DOMAIN 7 289 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 255 297 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 791 AA; 90820 MW; B90018D768F5B0BC CRC64; MLFYIDDLPV IFPYPRIYPE QYAYMCDLKR TLDAGGNCVL EMPSGTGKTA TLLSLIVAYQ QHNPEHRKLI YCSRTMSEIE KALAELRALM KYRAEQLGKE EDFRGLGLTS RKNLCLHPAV KREKSGAVVD ARCRSLTAGF IKEKKDKGED VDVCVYHDNL DLLEPHNLIP NGVWTFDGLL RYGEQHKQCP YFTARRMMQY CNVIIYSYHY LLDPKIAERV SKELSRDSII VFDEAHNIDN VCIESLSTDL TEDSLRKATR GAQNLENRIK QMRETDQKQL EDEYQKLVAG LRDADEARQE DAFMANPVLP DDLIREAVPG NIRRAEHFVA FLKRFIEYLK TRLKVLEVIS ETPPSFLAHL KEYTFIEKKP LRFCAERLTS LVRTLELTNI EDFQPLQEVA TFATLVATYE KGFLLLLEPY ETVKSKVVNP VLHFTCLDAA IAIKPVFERF KTVIITSGTL SPLEMYPKML GFDAIVQESY SMTLGRRSFL PMIVTKGSDQ AAISSSFAVR TDLPVVRNYG NLLTEFAKIT PDGMVVFFPS YFYMESIISM WQGMNILEEV WKYKLILVET PDAQETAVAL ETYRTACCNG TGAVMFCVAR GKVSEGIDFD HQYGRAVLCI GVPYQYTESL ILKARLEFLR ETYRIKENDF LSFDAMRHAA QCLGRVLRGK DDYGIMVLAD RRFPKKRSQL PKWINQALLE SDTNLSTDMA VSSARKFLKT MAQPFRPKDQ EGVSMWTLED LKRHQAQEEN RQIRELQGRP SRAAHAHGPR ADEEDYEMDD DEERDMMELD A // ID J4GJD1_9APHY Unreviewed; 759 AA. AC J4GJD1; DT 31-OCT-2012, integrated into UniProtKB/TrEMBL. DT 31-OCT-2012, sequence version 1. DT 11-MAY-2016, entry version 24. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CCL99110.1}; GN ORFNames=FIBRA_01124 {ECO:0000313|EMBL:CCL99110.1}; OS Fibroporia radiculosa. OC Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; OC Agaricomycetes; Polyporales; Polyporaceae; Fibroporia. OX NCBI_TaxID=599839 {ECO:0000313|EMBL:CCL99110.1, ECO:0000313|Proteomes:UP000006352}; RN [1] {ECO:0000313|EMBL:CCL99110.1, ECO:0000313|Proteomes:UP000006352} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=TFFH 294 {ECO:0000313|EMBL:CCL99110.1, RC ECO:0000313|Proteomes:UP000006352}; RX PubMed=22247176; DOI=10.1128/AEM.06745-11; RA Tang J.D., Perkins A.D., Sonstegard T.S., Schroeder S.G., RA Burgess S.C., Diehl S.V.; RT "Short-read sequencing for genomic analysis of the brown rot fungus RT Fibroporia radiculosa."; RL Appl. Environ. Microbiol. 78:2272-2281(2012). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; HE796917; CCL99110.1; -; Genomic_DNA. DR RefSeq; XP_012178393.1; XM_012323003.1. DR EnsemblFungi; CCL99110; CCL99110; FIBRA_01124. DR GeneID; 24094021; -. DR InParanoid; J4GJD1; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000006352; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000006352}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000006352}. FT DOMAIN 1 250 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 759 AA; 85791 MW; FC33C45371C0B855 CRC64; MPSGTGKTVS LLSLIVSYQQ FYPAKRKLIY CSRTVPEIEK ALEELKRLMV YRLSSAETEE EKEKERSFYG LGLTSRKNLC IHPEVSKEKK GKVVDARCRD LTNSAVCEKG RQNPGSVDLC DWHENLGKLD PGSLIPPGIW TLADVLQYGR DNTICPYFLV RRMMPFVDII IYSFHYLLDP KVAEQVSKEM SKDAIVVFDE AHNIDNVCIE SLSIDLSRPM LESAARSVGK LGDRIEEIKK TDASKLQDEY AKLVEGLQEA ANDEDAFMSN PVLPEDLLKE AIPGNIRKAE HFVAFLKRFV EYLKTRMRVL HVVAETPLSF LQHLKDITYI ERRPLRFCAE RLQSLVRTLD LSRLDEYASL QKVASFATLV ATYEKGAIHV GFLLILEPFE TDNATVPNPI FHLTCLDPAI AIKPVFERFS TVVITSGTIS PLDMYPKMLQ FTPVVQETYA MTLTRNSFLP LVITRGSDQV AISSRFEVRN DPAVVRNFGS ILIEYSKIVP DGIVAFFPSY LYMESIVAAW NDMGILNEVW KHKLIFVETP DANETSIALE NYRRACDNGR GAVLLSVARG KVSEGIDFDH NYGRAVIMFG VPYQYTESRI LKARLEYLRD AYRIRESEFL GFDAMRNAAQ CVGRVLRGKT DWGLMVFADK RFARADKRAK LPRWINQYIT ETASNLSTDM ALTLSKLFMR TISQNPNENQ TGVSLWTLED VEKAQARQRE LALQAAAAVQ GQAEGMDEDE EYGDGGLDDA VLGEMDLDV // ID J4UF35_BEAB2 Unreviewed; 749 AA. AC J4UF35; DT 31-OCT-2012, integrated into UniProtKB/TrEMBL. DT 31-OCT-2012, sequence version 1. DT 11-MAY-2016, entry version 25. DE SubName: Full=DNA repair helicase RAD3 {ECO:0000313|EMBL:EJP61017.1}; GN ORFNames=BBA_10031 {ECO:0000313|EMBL:EJP61017.1}; OS Beauveria bassiana (strain ARSEF 2860) (White muscardine disease OS fungus) (Tritirachium shiotae). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; OC Sordariomycetes; Hypocreomycetidae; Hypocreales; Cordycipitaceae; OC Beauveria. OX NCBI_TaxID=655819 {ECO:0000313|EMBL:EJP61017.1, ECO:0000313|Proteomes:UP000002762}; RN [1] {ECO:0000313|EMBL:EJP61017.1, ECO:0000313|Proteomes:UP000002762} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ARSEF 2860 {ECO:0000313|EMBL:EJP61017.1, RC ECO:0000313|Proteomes:UP000002762}; RX PubMed=22761991; DOI=10.1038/srep00483; RA Xiao G., Ying S.-H., Zheng P., Wang Z.-L., Zhang S., Xie X.-Q., RA Shang Y., St Leger R.J., Zhao G.-P., Wang C., Feng M.-G.; RT "Genomic perspectives on the evolution of fungal entomopathogenicity RT in Beauveria bassiana."; RL Sci. Rep. 2:483-483(2012). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; JH725231; EJP61017.1; -; Genomic_DNA. DR RefSeq; XP_008603350.1; XM_008605128.1. DR EnsemblFungi; EJP61017; EJP61017; BBA_10031. DR GeneID; 19893043; -. DR InParanoid; J4UF35; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000002762; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EJP61017.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000002762}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EJP61017.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EJP61017.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EJP61017.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000002762}. FT DOMAIN 1 243 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 214 259 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 749 AA; 85695 MW; 8172BF49223A9333 CRC64; MPSGTGKTVS LLSLIVAYQQ SMPEKRKLIY CSRTMSEIEK ALMELEALMK YRTEQLGHEE DFRGLGLTSR KNLCLHPSVK REKSGSVVDA RCRSLTAGFV KEKKERGENV DLCVYHDNLD LLESHNLIPN GVWTFDGILR YGEEHKQCPY FTARRMMQYC NVVIFSYHYL LDPKIAERVT KDFSKDCIVV FDEAHNIDNV CIESLSTDIT EDSLRRATRG AQNLKQKIAD MRETDQEQLQ NEYEKLVQGL READEARQED AFMANPVLPE ELLREAVPGN IRRAEHFVSF LQRFIEYLKA GAPVISETPP SFLAHLKEHT FIEKKPLGFC AERLTSLVRT LELTNIDDYQ PLQEVATFAT LVATYDKGFL LILEPYESDT AEVPNPILHF TCLDAAIAIR PVFDRFYSVI ITSGTISPLE MYPKMLDFST VIQESYSMTL ARRSFLPMIV TRGSDQASIS TSFQVRNEPS VVRNYGNLLT EFAKITPDGL VVFFPSYLYM ESIISMWQGM GILDEVWKYK LILVETPDAQ ETSLALETYR TACCNGRGAI LLCVARGKVS EGIDFDHQYG RTVLCIGVPF QYTESRILKA RLEFLRETYR IKENDFLSFD AMRHAAQCLG RVLRGKDDYG IMVLADRRFQ KKRPQLPKWI NQGLMDVDVN LSTDMAVSSA RRFLKTMAQP FRAKEQEGIS TWGYEDLERK AALDREEARK AEEAAAVKAA QMAAMQDNNK DYEFDDDDLD QDLMELENF // ID J7IMW0_DESMD Unreviewed; 794 AA. AC J7IMW0; DT 31-OCT-2012, integrated into UniProtKB/TrEMBL. DT 31-OCT-2012, sequence version 1. DT 11-MAY-2016, entry version 21. DE SubName: Full=DNA helicase, Rad3 {ECO:0000313|EMBL:AFQ42910.1}; GN OrderedLocusNames=Desmer_0881 {ECO:0000313|EMBL:AFQ42910.1}; OS Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB OS 13706 / S10). OC Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; OC Desulfosporosinus. OX NCBI_TaxID=768704 {ECO:0000313|EMBL:AFQ42910.1, ECO:0000313|Proteomes:UP000005262}; RN [1] {ECO:0000313|EMBL:AFQ42910.1, ECO:0000313|Proteomes:UP000005262} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10 RC {ECO:0000313|Proteomes:UP000005262}; RX PubMed=23105050; DOI=10.1128/JB.01392-12; RA Pester M., Brambilla E., Alazard D., Rattei T., Weinmaier T., Han J., RA Lucas S., Lapidus A., Cheng J.F., Goodwin L., Pitluck S., Peters L., RA Ovchinnikova G., Teshima H., Detter J.C., Han C.S., Tapia R., RA Land M.L., Hauser L., Kyrpides N.C., Ivanova N.N., Pagani I., RA Huntmann M., Wei C.L., Davenport K.W., Daligault H., Chain P.S., RA Chen A., Mavromatis K., Markowitz V., Szeto E., Mikhailova N., RA Pati A., Wagner M., Woyke T., Ollivier B., Klenk H.P., Spring S., RA Loy A.; RT "Complete genome sequences of Desulfosporosinus orientis DSM765T, RT Desulfosporosinus youngiae DSM17734T, Desulfosporosinus meridiei RT DSM13257T, and Desulfosporosinus acidiphilus DSM22704T."; RL J. Bacteriol. 194:6300-6301(2012). RN [2] {ECO:0000313|Proteomes:UP000005262} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10 RC {ECO:0000313|Proteomes:UP000005262}; RA Huntemann M., Wei C.-L., Han J., Detter J.C., Han C., Davenport K., RA Daligault H., Erkkila T., Gu W., Munk A.C.C., Teshima H., Xu Y., RA Chain P., Tapia R., Chen A., Krypides N., Mavromatis K., Markowitz V., RA Szeto E., Ivanova N., Mikhailova N., Ovchinnikova G., Pagani I., RA Pati A., Goodwin L., Peters L., Pitluck S., Woyke T., Pester M., RA Spring S., Ollivier B., Rattei T., Klenk H.-P., Wagner M., Loy A.; RT "Finished genome of Desulfosporosinus meridiei DSM 13257."; RL Submitted (AUG-2012) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP003629; AFQ42910.1; -; Genomic_DNA. DR RefSeq; WP_014901830.1; NC_018515.1. DR EnsemblBacteria; AFQ42910; AFQ42910; Desmer_0881. DR KEGG; dmi:Desmer_0881; -. DR OMA; DYNYYFD; -. DR Proteomes; UP000005262; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 4. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR001650; Helicase_C. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 5. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. DR PROSITE; PS51194; HELICASE_CTER; 1. PE 4: Predicted; KW ATP-binding {ECO:0000313|EMBL:AFQ42910.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000005262}; KW Helicase {ECO:0000313|EMBL:AFQ42910.1}; KW Hydrolase {ECO:0000313|EMBL:AFQ42910.1}; KW Nucleotide-binding {ECO:0000313|EMBL:AFQ42910.1}; KW Reference proteome {ECO:0000313|Proteomes:UP000005262}. FT DOMAIN 191 475 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT DOMAIN 595 789 Helicase C-terminal. FT {ECO:0000259|PROSITE:PS51194}. SQ SEQUENCE 794 AA; 91642 MW; 2F73955D148F0B61 CRC64; MIVKISVRNL VEFVLRRGDL QPGSIGASRA LEGIKAHQYI QKIGGSDYVP EVSLSYSYPN LEHPSSYKSN ICESLTLEVN GRADGIIIKE TTSCIDEIKT TSLDLDLIDE SFNDLYWAQA QCYAFMYASQ EGLEEMETQL TYVQLDTNQI KRFSRKFTLI ELNEFFINLV EEYLVWAYRL QEWIVKRDES IRTIQFPFGT YRPGQRELAV AVYQTIKQTQ KLFVQAPTGI GKTIGTLFPA LKAVAEGHTK QIFYLTAKTI TRTVAEKALL DLDTQGLKVK RLTLTAKSKI CFLPEESCLP EDCRFARGYY DRLRVAVDEM FNEDAWTRQT VENHARRHSI CPFEFSLELA NWADVVICDY NYVFDPRVYL KHLFLEGGEY TFLIDEAHNL VDRARDMFSA ELGKESWLSL KRKTKDDNKR LTKSLTKVNS ALVNEKKDCT ETTGNGESVQ KESPNGLIQA LRNFIKEAEY FLKTNDQPYS WQEQLLDHYF QALSFTRTAD SYDERYITYK YLTRDDFQIK LFCLDPAMRL MEALGRGRSA VLFSATLSPM DYFMNILGGE ETSYKLKLAS PFPAENLCLL VNDRISTKYK QRNSTYDQVA EAIQALVLTR MGNYFAFFSS YHYMKEVYSR FRELEPRVEV ICQFSDMEEE ERETFLKRFS QNPKQTLVGF VLLGGIFGEG IDLIGDRLSG AIVVGVGLPQ VCMEREVIRT YFEASCQLGF EFAYMYPGMN KVLQAVGRVI RTEKDRGVVL LIDERFSKTA YKRLFPEEWK SITFCRTCDS IVSSAERFWT VKNL // ID J7S920_KAZNA Unreviewed; 773 AA. AC J7S920; DT 31-OCT-2012, integrated into UniProtKB/TrEMBL. DT 31-OCT-2012, sequence version 1. DT 11-MAY-2016, entry version 25. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CCK71246.1}; GN Name=KNAG0G01890 {ECO:0000313|EMBL:CCK71246.1}; GN OrderedLocusNames=KNAG_0G01890 {ECO:0000313|EMBL:CCK71246.1}; OS Kazachstania naganishii (strain ATCC MYA-139 / BCRC 22969 / CBS 8797 / OS CCRC 22969 / KCTC 17520 / NBRC 10181 / NCYC 3082) (Yeast) OS (Saccharomyces naganishii). OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; OC Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Kazachstania. OX NCBI_TaxID=1071383 {ECO:0000313|EMBL:CCK71246.1, ECO:0000313|Proteomes:UP000006310}; RN [1] {ECO:0000313|EMBL:CCK71246.1, ECO:0000313|Proteomes:UP000006310} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC MYA-139 / BCRC 22969 / CBS 8797 / CCRC 22969 / KCTC 17520 RC / NBRC 10181 / NCYC 3082 {ECO:0000313|Proteomes:UP000006310}; RX PubMed=22123960; DOI=10.1073/pnas.1112808108; RA Gordon J.L., Armisen D., Proux-Wera E., OhEigeartaigh S.S., RA Byrne K.P., Wolfe K.H.; RT "Evolutionary erosion of yeast sex chromosomes by mating-type RT switching accidents."; RL Proc. Natl. Acad. Sci. U.S.A. 108:20024-20029(2011). RN [2] {ECO:0000313|Proteomes:UP000006310} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC MYA-139 / BCRC 22969 / CBS 8797 / CCRC 22969 / KCTC 17520 RC / NBRC 10181 / NCYC 3082 {ECO:0000313|Proteomes:UP000006310}; RA Gordon J.L., Armisen D., Proux-Wera E., OhEigeartaigh S.S., RA Byrne K.P., Wolfe K.H.; RT "Genome sequence of Kazachstania naganishii."; RL Submitted (AUG-2012) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; HE978320; CCK71246.1; -; Genomic_DNA. DR EnsemblFungi; CCK71246; CCK71246; KNAG_0G01890. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000006310; Chromosome 7. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000006310}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000006310}. FT DOMAIN 7 285 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 773 AA; 88446 MW; 66369F3DEE4A6057 CRC64; MKFFIDDLPV LFPYPKIYPE QYHYMCDIKR TLDAGGNSIL EMPSGTGKTV SLLSLTVAYQ MHYPEHRKII YCSRTMSEIE KALVELENLM DYRAKELGHA EEFRGLGLTS RKNLCLHPVV RKERKGTVVD EKCRRLTNGV NKRKLEEDPN AEVELCAYHE NLYDLDVENY LPNGVFSFEK LIKYCEEKTL CPYFIVRRMI SMCNIIIYSY HYLLDPKIAE RVSREVSKDS IVIFDEAHNI DNVCIESLSL DLTNDVLRRA AKGANSLEEK VQEVRSVDAT KLQDEYSKLV QGLHMVDIVP AQEETFVETP VLSEDLLTEA IPGNIRRAEH FVSFMKRLIE YLKTRMKVLH VISETPKSFL QHLKHLTFID RKPLRFCSER LSLLVRTLEV TEVEDFTALK DIATFATLIS TYEDGFQLII EPYEIENAAV PNPIMRFTCL DASIAIKPVF ETFSSVIITS GTISPLDMYP KMLNFETVLQ KSYAMTLAKK SFLPMIVTKG SDQVAISSRF EIRNDPSIVR NYGSMMVEFA KITPDGMVVF FPSYLYMESI VSMWQTMGIL DEVWKHKLIL VETPDAQETS LALETYRKAC SNGRGAILMS VARGKVSEGI DFDHQYGRTV LMIGIPFQYT ESRILKARLE FLRENYQIKE NDFLSFDAMR HAAQCLGRVL RGKDDYGVMV LADRRFARKK SQLPKWIAQG LSDADMNLST DMAIANAKQF LRTMAQPTDP KDQEGVSVWN LDDLKGYQEQ KQASNGTVIH DGDVDGDIAM TDH // ID J8Q5M5_SACAR Unreviewed; 777 AA. AC J8Q5M5; DT 31-OCT-2012, integrated into UniProtKB/TrEMBL. DT 31-OCT-2012, sequence version 1. DT 11-MAY-2016, entry version 23. DE SubName: Full=Rad3p {ECO:0000313|EMBL:EJS43941.1}; GN ORFNames=SU7_0956 {ECO:0000313|EMBL:EJS43941.1}; OS Saccharomyces arboricola (strain H-6 / AS 2.3317 / CBS 10644) (Yeast). OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; OC Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces. OX NCBI_TaxID=1160507 {ECO:0000313|EMBL:EJS43941.1, ECO:0000313|Proteomes:UP000006968}; RN [1] {ECO:0000313|EMBL:EJS43941.1, ECO:0000313|Proteomes:UP000006968} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=H-6 / AS 2.3317 / CBS 10644 RC {ECO:0000313|Proteomes:UP000006968}; RX PubMed=23368932; DOI=10.1186/1471-2164-14-69; RA Liti G., Nguyen Ba A.N., Blythe M., Mueller C.A., Bergstroem A., RA Cubillos F.A., Dafhnis-Calas F., Khoshraftar S., Malla S., Mehta N., RA Siow C.C., Warringer J., Moses A.M., Louis E.J., Nieduszynski C.A.; RT "High quality de novo sequencing and assembly of the Saccharomyces RT arboricolus genome."; RL BMC Genomics 14:69-69(2013). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:EJS43941.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ALIE01000061; EJS43941.1; -; Genomic_DNA. DR EnsemblFungi; EJS43941; EJS43941; SU7_0956. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000006968; Chromosome V. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000006968}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000006968}. FT DOMAIN 7 285 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 777 AA; 89544 MW; 9A8D158D35A02E77 CRC64; MKFYIDDLPV LFPYPKIYPE QYNYMCDIKR TLDVGGNSIL EMPSGTGKTV SLLSLTIAYQ MHYPEHRKII YCSRTMSEIE KALVELENLM DYRTKELGYQ EDFRGLGLTS RKNLCLHPEV SKERKGTVVD EKCRRMTNGQ AKRKLEEDSN ANVELCEYHE NLYNIEVEDY LPKGVFSFEK LLRYCEEKTL CPYFIVRRMI SLCNIIIYSY HYLLDPKIAE RVSNEVSKDS IVIFDEAHNI DNVCIESLSL DLTTDALRRA TRGANALDER ISEVRKVDSQ KLQDEYEKLV QGLHSADILT EQEEPFVETP VLPQDLLTEA IPGNIRRAEH FVSFLKRLIE YLKTRMKVLH VISETPKSFL QHLKQLTFIE RKPLRFCSER LSLLVRTLEV AEVEDFTALK DIATFATLIS TYEEGFLLII EPYEIENAAV PNPIMRFTCL DASIAIKPVF ERFSSVIITS GTISPLDMYP RMLNFKTVLQ KSYAMTLAKK SFLPMIITKG SDQVAISSRF EIRNDPSIVR NYGSMLVEFA KITPDGMVVF FPSYLYMESI VSMWQTMGIL DEVWKHKLIL VETPDAQETS LALETYRKAC SNGRGAILLS VARGKVSEGI DFDHQYGRTV LMIGIPFQYT ESRILKARLE FMRENYRIRE NDFLSFDAMR HAAQCLGRVL RGKDDYGVMV LADRRFSRKR SQLPKWIAQG LSDADLNLST DMAISNTKQF LRTMAQPTDP KDQEGVSVWS YDDLIKHQNS KKDQGGFIES KNKEEGEQDE DGDIEMQ // ID J9DJ02_EDHAE Unreviewed; 942 AA. AC J9DJ02; DT 31-OCT-2012, integrated into UniProtKB/TrEMBL. DT 31-OCT-2012, sequence version 1. DT 11-MAY-2016, entry version 22. DE SubName: Full=DNA repair helicase (Rad3) {ECO:0000313|EMBL:EJW01367.1}; GN ORFNames=EDEG_04004 {ECO:0000313|EMBL:EJW01367.1}; OS Edhazardia aedis (strain USNM 41457) (Microsporidian parasite). OC Eukaryota; Fungi; Microsporidia; Edhazardia. OX NCBI_TaxID=1003232 {ECO:0000313|EMBL:EJW01367.1, ECO:0000313|Proteomes:UP000003163}; RN [1] {ECO:0000313|EMBL:EJW01367.1, ECO:0000313|Proteomes:UP000003163} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=USNM 41457 {ECO:0000313|EMBL:EJW01367.1, RC ECO:0000313|Proteomes:UP000003163}; RA Liu Z.J., Shi F.L., Lu J.Q., Li M., Wang Z.L.; RL Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases. RN [2] {ECO:0000313|Proteomes:UP000003163} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=USNM 41457 {ECO:0000313|Proteomes:UP000003163}; RG The Broad Institute Genomics Platform; RG The Broad Institute Genome Sequencing Center for Infectious Disease; RA Cuomo C.A., Sanscrainte N.D., Goldberg J.M., Heiman D., Young S., RA Zeng Q., Becnel J.J., Birren B.W.; RT "Contrasting host-pathogen interactions and genome evolution in two RT generalist and specialist microsporidian pathogens of mosquitoes."; RL Submitted (JUL-2015) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:EJW01367.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AFBI03000176; EJW01367.1; -; Genomic_DNA. DR EnsemblFungi; EJW01367; EJW01367; EDEG_04004. DR InParanoid; J9DJ02; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000003163; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 2. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 5. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EJW01367.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000003163}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EJW01367.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EJW01367.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EJW01367.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000003163}. FT DOMAIN 7 394 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 358 397 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 942 AA; 107273 MW; 9D0A4D540B4423ED CRC64; MKVVINEITV YFPFPTMYPE QHEYISEVLS LLKTQGHCLL EMPSGTGKTI SLLSSIISYI LHLKENFRTV QTECNTDITS SALNKRAKIS KNKTDLSAVQ NCYETEIYCE KNDFVTRNIS NLDSSFSRAI PKIMYGSRTV GEIEKALEEL KFLINYIENE YKIDMSDFLG VGLTSRNVLC VNENARKMPF SIEHACNRLT NAEDPKQGCK YFQNLEDLGS NFTSLNSIKL KKNCNEINCA DKCQNYSVDD GEGKNIMGNS MSNEQTSFDL KANFCGYKPL NGVYTLADLV TLGKTKNICP YFLARKILAS SDIIIFTYNY LIDPRIKSIV LKEIGLNSIV IFDEAHNIDN ACIEAMSVDI KRSDLENANK EIKALELEIQ KARAESIEIL REEAEKIKTE KLHYVEGSVP YNSNLLDSYY EKLCNSKNMK TEQNNKNKKH IGFDVNDDVK NDSILSINNN EKNLEINENK NNDKTNFYNI NDEKNAKKQE GLDFFNLNYE FAPGNIRNSI HFLSTLKRLT EYFKTKLKTT HLTTETTSSF CKSIKDLTLI DKKTLSFLST RLSLLIRTLN LNGKIELSAI KKLCDFGSIA AQYQNGFSII FEPFDSMAQT VFSPILRLYC MDASIALKSV FSYRSVIITS GTLSPMDFYC KILDFIPVKH KEIGIRLKRN CIGPLIVTKG NDQMMIKIGE ESQLKNNMPS SISEKPKDNV QGKENVVSSS YSLRNDPSVI RNYGLLIIEF SKITPDGLVV FFPSYIFMEE IVSCWSELNI ITEIKKNKLI FIETPDIKET EKALKLFKIA CENGRGGVLF SVARGKVSEG VDFKNEHGRC VIVLGVPYQF TESIRLKKRL EYLNQNFGIS SSEFLSFDAM RHAAQCLGRV LRDKNDYGLM IMADYRFEKG DRKKKLPKWI LNCIEGGNTN LSIDMAVCIA KRFYREMAQP MF // ID J9FAQ4_WUCBA Unreviewed; 772 AA. AC J9FAQ4; DT 31-OCT-2012, integrated into UniProtKB/TrEMBL. DT 31-OCT-2012, sequence version 1. DT 11-MAY-2016, entry version 22. DE SubName: Full=Excision repair cross-complementing rodent repair deficiency {ECO:0000313|EMBL:EJW86627.1}; GN ORFNames=WUBG_02462 {ECO:0000313|EMBL:EJW86627.1}; OS Wuchereria bancrofti. OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Spirurida; OC Filarioidea; Onchocercidae; Wuchereria. OX NCBI_TaxID=6293 {ECO:0000313|EMBL:EJW86627.1, ECO:0000313|Proteomes:UP000004810}; RN [1] {ECO:0000313|Proteomes:UP000004810} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=NA {ECO:0000313|Proteomes:UP000004810}; RA Nutman T.B., Fink D.L., Russ C., Young S., Zeng Q., Koehrsen M., RA Alvarado L., Berlin A., Chapman S.B., Chen Z., Freedman E., RA Gellesch M., Goldberg J., Griggs A., Gujja S., Heilman E.R., RA Heiman D., Hepburn T., Howarth C., Jen D., Larson L., Lewis B., RA Mehta T., Park D., Pearson M., Roberts A., Saif S., Shea T., RA Shenoy N., Sisk P., Stolte C., Sykes S., Walk T., White J., RA Yandava C., Haas B., Henn M.R., Nusbaum C., Birren B.; RT "The Genome Sequence of Wuchereria bancrofti."; RL Submitted (AUG-2012) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:EJW86627.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ADBV01000658; EJW86627.1; -; Genomic_DNA. DR InParanoid; J9FAQ4; -. DR Proteomes; UP000004810; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000004810}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000004810}. FT DOMAIN 18 295 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 772 AA; 88145 MW; 26DCF3017A79754B CRC64; MLGRRTNGVK NLKIDVDGLE VYFPYDYIYP EQILYMSELK KTLDAKGHCL LEMPSGTGKT VSLLSLVIAY MLRFPDHLDK LVYCSRTIPE IEKCVEELRN LFKYYEQCDG KPPSLFAVAL SARKNLCINE SVSSLRQGSL VDGACQKLTA SFVRAKRRLR PDLPCCAFFE KLDEQKDFNY PDGVYNLQNL RKLGQQRGIC PYFLSRNVVD RAHIVVYSYH YILDPKIAEL VSKNFSRHSC VVFDEAHNID NVCIESMSVS LTKTTVEKAT QKLGILEEHV QRLREENSEQ LRVEYDRLVE GLRRIEEERT NDQILANPVL PDMILKEAVP GTIRNALHFI SFLRRFNEYL KHRMRTKTVL IESPAAFLRD VNDLMHIDRR PLRFCAERFA SLTRTLELAD ISDFSSLVLI TNFATLVSTY ARGFTVVIEP LDEKSGTGHS CTLHLSCMDA SVAIRPIFQR YHTVVITSGT LSPLDMYPKI LDFDPAIMAS LSMTLARPCI APLIVSKGND QVAMTSRFES REDAAVIRNY GSLVLELASL VPDGVVVFFT SYLYMENVIS TWYDQGIIDE LLKYKLLFIE TTDALETSIA LEKYVEACDC GRGAIFFSVA RGKVSEGIDF SHHLGRAVIM LGVPYVYTES RILRARLEYL REQLGIREND FLTFDAMRQA AQCMGRALRG KSDYGLMVFA DKRFSRKDKM GKLPRWIQEY ITPGNVNLSI EEAVIIARKW FPLMAQSFTK EHQLGISLLT EEMLREKELL GKKFGHVLEE VD // ID J9K5Q5_ACYPI Unreviewed; 756 AA. AC J9K5Q5; DT 31-OCT-2012, integrated into UniProtKB/TrEMBL. DT 31-OCT-2012, sequence version 1. DT 11-MAY-2016, entry version 30. DE SubName: Full=Uncharacterized protein {ECO:0000313|EnsemblMetazoa:ACYPI008186-PA}; GN Name=LOC100569745 {ECO:0000313|EnsemblMetazoa:ACYPI008186-PA}; OS Acyrthosiphon pisum (Pea aphid). OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; OC Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; OC Aphidiformes; Aphidoidea; Aphididae; Macrosiphini; Acyrthosiphon. OX NCBI_TaxID=7029 {ECO:0000313|EnsemblMetazoa:ACYPI008186-PA, ECO:0000313|Proteomes:UP000007819}; RN [1] {ECO:0000313|EnsemblMetazoa:ACYPI008186-PA} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RA Jiang H., Abraham K., Ali S., Alsbrooks S.L., Anim B.N., Anosike U.S., RA Attaway T., Bandaranaike D.P., Battles P.K., Bell S.N., Bell A.V., RA Beltran B., Bickham C., Bustamante Y., Caleb T., Canada A., RA Cardenas V., Carter K., Chacko J., Chandrabose M.N., Chavez D., RA Chavez A., Chen L., Chu H.-S., Claassen K.J., Cockrell R., Collins M., RA Cooper J.A., Cree A., Curry S.M., Da Y., Dao M.D., Das B., RA Davila M.-L., Davy-Carroll L., Denson S., Dinh H., Ebong V.E., RA Edwards J.R., Egan A., El-Daye J., Escobedo L., Fernandez S., RA Fernando P.R., Flagg N., Forbes L.D., Fowler R.G., Fu Q., Gabisi R.A., RA Ganer J., Garbino Pronczuk A., Garcia R.M., Garner T., Garrett T.E., RA Gonzalez D.A., Hamid H., Hawkins E.S., Hirani K., Hogues M.E., RA Hollins B., Hsiao C.-H., Jabil R., James M.L., Jhangiani S.N., RA Johnson B., Johnson Q., Joshi V., Kalu J.B., Kam C., Kashfia A., RA Keebler J., Kisamo H., Kovar C.L., Lago L.A., Lai C.-Y., Laidlaw J., RA Lara F., Le T.-K., Lee S.L., Legall F.H., Lemon S.J., Lewis L.R., RA Li B., Liu Y., Liu Y.-S., Lopez J., Lozado R.J., Lu J., Madu R.C., RA Maheshwari M., Maheshwari R., Malloy K., Martinez E., Mathew T., RA Mercado I.C., Mercado C., Meyer B., Montgomery K., Morgan M.B., RA Munidasa M., Nazareth L.V., Nelson J., Ng B.M., Nguyen N.B., RA Nguyen P.Q., Nguyen T., Obregon M., Okwuonu G.O., Onwere C.G., RA Orozco G., Parra A., Patel S., Patil S., Perez A., Perez Y., Pham C., RA Primus E.L., Pu L.-L., Puazo M., Qin X., Quiroz J.B., Reese J., RA Richards S., Rives C.M., Robberts R., Ruiz S.J., Ruiz M.J., RA Santibanez J., Schneider B.W., Sisson I., Smith M., Sodergren E., RA Song X.-Z., Song B.B., Summersgill H., Thelus R., Thornton R.D., RA Trejos Z.Y., Usmani K., Vattathil S., Villasana D., Walker D.L., RA Wang S., Wang K., White C.S., Williams A.C., Williamson J., Wilson K., RA Woghiren I.O., Woodworth J.R., Worley K.C., Wright R.A., Wu W., RA Young L., Zhang L., Zhang J., Zhu Y., Muzny D.M., Weinstock G., RA Gibbs R.A.; RL Submitted (JUN-2010) to the EMBL/GenBank/DDBJ databases. RN [2] {ECO:0000313|EnsemblMetazoa:ACYPI008186-PA} RP IDENTIFICATION. RG EnsemblMetazoa; RL Submitted (JUN-2015) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ABLF02031359; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR RefSeq; XP_001943653.1; XM_001943618.3. DR STRING; 7029.ACYPI008186-PA; -. DR EnsemblMetazoa; ACYPI008186-RA; ACYPI008186-PA; ACYPI008186. DR GeneID; 100167387; -. DR KEGG; api:100167387; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; J9K5Q5; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG70W3CM; -. DR PhylomeDB; J9K5Q5; -. DR Proteomes; UP000007819; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 2. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000007819}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000007819}. FT DOMAIN 7 284 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 756 AA; 86000 MW; AD06650B4FCBFD70 CRC64; MKFFIDELEV LFPYEYIYPE QYAYMVELKK AIDAKGHCLL EMPSGTGKTI TILSLIVAYM IKYPAKLGKL LYSTRTLSEI EKAAEELRVL CDYYKSNKYD ANVLGVVLSS RKNLCVNPSI AGEHNGRVVD ARCHALTAPF VRARHADGEA VNVCEFYEKL DSLGRDTILP PNIYNIEDLK ELGVKQGICP YFVARQTLIH ANVVIYSYHY LLDPKIAGIV SKDFNKNTIV VFDEAHNIDN VCIDSLSSHI TSNNLDKAIE GLNKLDTEVT AMKERDSQRL KEEYRKMVDG LREIYRNREA NAALANPIVP DQVLKITELP GSIRSAEHYI GFMKRFIMYL KLRMNSTTVV QETPIMFIKD VYQKVCINRK PLRFCTERLS SLLRTLEISE ITDFSPLITV AQFATLVSTY MKGFMIIIEP FDERSSTDSC VMHFSCLDAS IAIKPILDYF NTVLITSGTL SPLDMYPKIL NINPVIMTSL TMTLSRQCFL PMVVGRGNDQ VALTSKWESR EDSSVARNYG HLLLEMVKVV PDGVVCFFPS YLYMKSVVAA WYDQGLIEKI LDYKLIFIET QNIVVTNHAI KCYAEAIERG KGALLLSVAR GKVSEGMDFD HHYGRAVIVL GMPYVYTQCR ILKARMEYLC SQYQISEGDF LTFDAMRHTA QCVGRAIRGK MDYGIMVFAD KRFARHDKRS KLPKWIQAYL TDNVCNLTVD EAAQMAKRWL RYIAQPDPIE NQMGVSLLDV NGLNKTDFLT KVVQKC // ID J9NWT1_CANLF Unreviewed; 707 AA. AC J9NWT1; DT 31-OCT-2012, integrated into UniProtKB/TrEMBL. DT 31-OCT-2012, sequence version 1. DT 11-MAY-2016, entry version 27. DE SubName: Full=Uncharacterized protein {ECO:0000313|Ensembl:ENSCAFP00000037742}; GN Name=ERCC2 {ECO:0000313|Ensembl:ENSCAFP00000037742}; OS Canis lupus familiaris (Dog) (Canis familiaris). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; OC Canis. OX NCBI_TaxID=9615 {ECO:0000313|Ensembl:ENSCAFP00000037742, ECO:0000313|Proteomes:UP000002254}; RN [1] {ECO:0000313|Ensembl:ENSCAFP00000037742, ECO:0000313|Proteomes:UP000002254} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Boxer {ECO:0000313|Ensembl:ENSCAFP00000037742, RC ECO:0000313|Proteomes:UP000002254}; RX PubMed=16341006; DOI=10.1038/nature04338; RG Broad Sequencing Platform; RA Lindblad-Toh K., Wade C.M., Mikkelsen T.S., Karlsson E.K., Jaffe D.B., RA Kamal M., Clamp M., Chang J.L., Kulbokas E.J. III, Zody M.C., RA Mauceli E., Xie X., Breen M., Wayne R.K., Ostrander E.A., RA Ponting C.P., Galibert F., Smith D.R., deJong P.J., Kirkness E.F., RA Alvarez P., Biagi T., Brockman W., Butler J., Chin C.-W., Cook A., RA Cuff J., Daly M.J., DeCaprio D., Gnerre S., Grabherr M., Kellis M., RA Kleber M., Bardeleben C., Goodstadt L., Heger A., Hitte C., Kim L., RA Koepfli K.-P., Parker H.G., Pollinger J.P., Searle S.M.J., RA Sutter N.B., Thomas R., Webber C., Baldwin J., Abebe A., RA Abouelleil A., Aftuck L., Ait-Zahra M., Aldredge T., Allen N., An P., RA Anderson S., Antoine C., Arachchi H., Aslam A., Ayotte L., RA Bachantsang P., Barry A., Bayul T., Benamara M., Berlin A., RA Bessette D., Blitshteyn B., Bloom T., Blye J., Boguslavskiy L., RA Bonnet C., Boukhgalter B., Brown A., Cahill P., Calixte N., RA Camarata J., Cheshatsang Y., Chu J., Citroen M., Collymore A., RA Cooke P., Dawoe T., Daza R., Decktor K., DeGray S., Dhargay N., RA Dooley K., Dooley K., Dorje P., Dorjee K., Dorris L., Duffey N., RA Dupes A., Egbiremolen O., Elong R., Falk J., Farina A., Faro S., RA Ferguson D., Ferreira P., Fisher S., FitzGerald M., Foley K., RA Foley C., Franke A., Friedrich D., Gage D., Garber M., Gearin G., RA Giannoukos G., Goode T., Goyette A., Graham J., Grandbois E., RA Gyaltsen K., Hafez N., Hagopian D., Hagos B., Hall J., Healy C., RA Hegarty R., Honan T., Horn A., Houde N., Hughes L., Hunnicutt L., RA Husby M., Jester B., Jones C., Kamat A., Kanga B., Kells C., RA Khazanovich D., Kieu A.C., Kisner P., Kumar M., Lance K., Landers T., RA Lara M., Lee W., Leger J.-P., Lennon N., Leuper L., LeVine S., Liu J., RA Liu X., Lokyitsang Y., Lokyitsang T., Lui A., Macdonald J., Major J., RA Marabella R., Maru K., Matthews C., McDonough S., Mehta T., RA Meldrim J., Melnikov A., Meneus L., Mihalev A., Mihova T., Miller K., RA Mittelman R., Mlenga V., Mulrain L., Munson G., Navidi A., Naylor J., RA Nguyen T., Nguyen N., Nguyen C., Nguyen T., Nicol R., Norbu N., RA Norbu C., Novod N., Nyima T., Olandt P., O'Neill B., O'Neill K., RA Osman S., Oyono L., Patti C., Perrin D., Phunkhang P., Pierre F., RA Priest M., Rachupka A., Raghuraman S., Rameau R., Ray V., Raymond C., RA Rege F., Rise C., Rogers J., Rogov P., Sahalie J., Settipalli S., RA Sharpe T., Shea T., Sheehan M., Sherpa N., Shi J., Shih D., Sloan J., RA Smith C., Sparrow T., Stalker J., Stange-Thomann N., Stavropoulos S., RA Stone C., Stone S., Sykes S., Tchuinga P., Tenzing P., Tesfaye S., RA Thoulutsang D., Thoulutsang Y., Topham K., Topping I., Tsamla T., RA Vassiliev H., Venkataraman V., Vo A., Wangchuk T., Wangdi T., RA Weiand M., Wilkinson J., Wilson A., Yadav S., Yang S., Yang X., RA Young G., Yu Q., Zainoun J., Zembek L., Zimmer A., Lander E.S.; RT "Genome sequence, comparative analysis and haplotype structure of the RT domestic dog."; RL Nature 438:803-819(2005). RN [2] {ECO:0000313|Ensembl:ENSCAFP00000037742} RP IDENTIFICATION. RC STRAIN=Boxer {ECO:0000313|Ensembl:ENSCAFP00000037742}; RG Ensembl; RL Submitted (SEP-2012) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an Ensembl CC automatic analysis pipeline and should be considered as CC preliminary data. {ECO:0000313|Ensembl:ENSCAFP00000037742}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AAEX03000876; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR STRING; 9615.ENSCAFP00000006714; -. DR PaxDb; J9NWT1; -. DR Ensembl; ENSCAFT00000044333; ENSCAFP00000037742; ENSCAFG00000004487. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR GeneTree; ENSGT00550000075092; -. DR OrthoDB; EOG70W3CM; -. DR Reactome; R-CFA-112382; Formation of RNA Pol II elongation complex. DR Reactome; R-CFA-113418; Formation of the Early Elongation Complex. DR Reactome; R-CFA-5696395; Formation of Incision Complex in GG-NER. DR Reactome; R-CFA-5696400; Dual Incision in GG-NER. DR Reactome; R-CFA-674695; RNA Polymerase II Pre-transcription Events. DR Reactome; R-CFA-6781823; Formation of TC-NER Pre-Incision Complex. DR Reactome; R-CFA-6782135; Dual incision in TC-NER. DR Reactome; R-CFA-6782210; Gap-filling DNA repair synthesis and ligation in TC-NER. DR Reactome; R-CFA-72086; mRNA Capping. DR Reactome; R-CFA-73762; RNA Polymerase I Transcription Initiation. DR Reactome; R-CFA-73772; RNA Polymerase I Promoter Escape. DR Reactome; R-CFA-73776; RNA Polymerase II Promoter Escape. DR Reactome; R-CFA-73777; RNA Polymerase I Chain Elongation. DR Reactome; R-CFA-73779; RNA Polymerase II Transcription Pre-Initiation And Promoter Opening. DR Reactome; R-CFA-73863; RNA Polymerase I Transcription Termination. DR Reactome; R-CFA-75953; RNA Polymerase II Transcription Initiation. DR Reactome; R-CFA-75955; RNA Polymerase II Transcription Elongation. DR Reactome; R-CFA-76042; RNA Polymerase II Transcription Initiation And Promoter Clearance. DR Reactome; R-CFA-77075; RNA Pol II CTD phosphorylation and interaction with CE. DR Proteomes; UP000002254; Chromosome 1. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 2. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000002254}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000002254}. FT DOMAIN 7 283 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 77 100 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 707 AA; 80127 MW; 1323D61D7CAD8C51 CRC64; MKLNVDGLLV YFPYDYIYPE QFSYMLELKR TLDAKGHGVL EMPSGTGKTV SLLALIMAYQ RAYPLEVTKL IYCSRTVPEI EKVIEELRKL LNFYEKQEGE KLPFLGLALS SRKNLCIHPE VMPLRFGKDV DGKCHSLTAS YVRAQYQQDS SLPHCRFYEE FDVHGRQVPL PAGIYNLDDL KALGQRQGWC PYFLARYSIL HANVVVYSYH YLLDPKIAEL VSKELARKAV VVFDEAHNID NVCIDSMSVN ITRRTLDRCQ GNLETLQKTV LRIKETDEQR LREEYRRLVE GLREASAARE TDAHLANPVL PDEVLQEAVP GSIRTAEHFL GFLRRLLEYV KWRLRVQHVV QESPPAFLSG LAQRVCIQRK PLRFCAERLR SLLHTLEIAD LADFSPLTLL ANFATLVSTY AKGFTIIIEP FDDRTPTIAN PILHFSCMDA SLAIKPVFER FQSVIITSGT LSPLDIYPKI LDFHPVTMAT FTMTLARVCL CPMIIGRGND QVAISSKFET REDIAVIRNY GNLLLEMSAV VPDGIVAFFT SYQYMESTVA SWYEQGILEN IQRNKLLFIE TQDGAETSVA LEKYQEACEN GRGAILLSVA RGKVSEGIDF VHHYGRAVIM FGVPYVYTQS RILKARLEYL RDQFQIREMT SSLWMPCATQ PSVWVVPFGA RRTMASWSLL ISGLPGQTSV GNCLAGSRST SLMPTST // ID K0KPM4_WICCF Unreviewed; 781 AA. AC K0KPM4; DT 28-NOV-2012, integrated into UniProtKB/TrEMBL. DT 28-NOV-2012, sequence version 1. DT 11-MAY-2016, entry version 25. DE SubName: Full=DNA excision repair protein {ECO:0000313|EMBL:CCH43113.1}; DE EC=3.6.1.- {ECO:0000313|EMBL:CCH43113.1}; GN ORFNames=BN7_2660 {ECO:0000313|EMBL:CCH43113.1}; OS Wickerhamomyces ciferrii (strain F-60-10 / ATCC 14091 / CBS 111 / JCM OS 3599 / NBRC 0793 / NRRL Y-1031) (Yeast) (Pichia ciferrii). OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; OC Saccharomycetes; Saccharomycetales; Phaffomycetaceae; Wickerhamomyces. OX NCBI_TaxID=1206466 {ECO:0000313|Proteomes:UP000009328}; RN [1] {ECO:0000313|EMBL:CCH43113.1, ECO:0000313|Proteomes:UP000009328} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=F-60-10 / ATCC 14091 / CBS 111 / JCM 3599 / NBRC 0793 / NRRL RC Y-1031 {ECO:0000313|Proteomes:UP000009328}; RX PubMed=23193139; DOI=10.1128/EC.00258-12; RA Schneider J., Andrea H., Blom J., Jaenicke S., Rueckert C., RA Schorsch C., Szczepanowski R., Farwick M., Goesmann A., Puehler A., RA Schaffer S., Tauch A., Koehler T., Brinkrolf K.; RT "Draft genome sequence of Wickerhamomyces ciferrii NRRL Y-1031 F-60- RT 10."; RL Eukaryot. Cell 11:1582-1583(2012). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:CCH43113.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CAIF01000068; CCH43113.1; -; Genomic_DNA. DR EnsemblFungi; CCH43113; CCH43113; BN7_2660. DR InParanoid; K0KPM4; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000009328; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000009328}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000009328}. FT DOMAIN 7 285 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 781 AA; 89582 MW; 36CBA0201009648D CRC64; MKFYIDDLPV LFPYPRIYPE QYAYMSDIKK TLDVGGNSIL EMPSGTGKTV SLLSLTIAYQ MHYPEHRKIV YCSRTMSEIE KALIELHNLM TYRAKELGYV EDFRGLGLTS RKNLCLHPTV SKEKKGSIVD EKCRRMTSGL AKRKIESGET ENVDLCEFHE NLYELEPDNL VPPGVYSFDS LTNYCKDQKT CPYFTVRRMI PFCNIIIYSY HYLLDPKISE RVSKELSKDS IIIFDEAHNI DNVCIESLSL DLNNDVLKKA SKGANSLSKR IEEVKKTDSK KLQDEYEKLV SGLSAADIIN NEQQMMETPV LSEDLLKEAI PGNIRRAEHF VSFLKRFIEY LKTRMKVLHV ISETPTSFLQ HVKQLTFIER KPLRFCSERL SLLVRTLEIT DVEDYNALKD VATFATLVST YEQGFALILE PYETENATVP NPILRFTCLD ASIAIKPIFE RFSSVIITSG TISPLDMYPR MLNFETVIQE SYSMTLAKRS FLPLVVTKGS DQVAISSRFE IRNDPSIVRN YGSLLIEFSK ITPDGMVVFF PSYLYMESII SMWQTMGILD EVWKYKLILV ETPDAQETAL ALETYRTACS NGRGAILLSV ARGKVSEGID FDHHYGRTVL MIGIPFQYTE SRILKARLEF LRDHYQIREN DFLSFDAMRH AAQCLGRVLR GKDDYGVMIL ADRRFGRKRN QLPKWIQQAL LDADTNLSTD MAVANAKQFL RTMAQPTNPK DQEGVSVWDL EQLQNFQKQQ VTDLGEDDEM EIDDGDQPAL TREEEEELAN L // ID K0T2N8_THAOC Unreviewed; 797 AA. AC K0T2N8; DT 28-NOV-2012, integrated into UniProtKB/TrEMBL. DT 28-NOV-2012, sequence version 1. DT 11-MAY-2016, entry version 17. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EJK67551.1}; GN ORFNames=THAOC_11394 {ECO:0000313|EMBL:EJK67551.1}; OS Thalassiosira oceanica (Marine diatom). OC Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; OC Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; OC Thalassiosira. OX NCBI_TaxID=159749 {ECO:0000313|EMBL:EJK67551.1, ECO:0000313|Proteomes:UP000007974}; RN [1] {ECO:0000313|EMBL:EJK67551.1, ECO:0000313|Proteomes:UP000007974} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=CCMP1005 {ECO:0000313|EMBL:EJK67551.1}; RX PubMed=22835381; DOI=10.1186/gb-2012-13-7-r66; RA Lommer M., Specht M., Roy A.S., Kraemer L., Andreson R., RA Gutowska M.A., Wolf J., Bergner S.V., Schilhabel M.B., RA Klostermeier U.C., Beiko R.G., Rosenstiel P., Hippler M., Laroche J.; RT "Genome and low-iron response of an oceanic diatom adapted to chronic RT iron limitation."; RL Genome Biol. 13:R66-R66(2012). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:EJK67551.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AGNL01012936; EJK67551.1; -; Genomic_DNA. DR EnsemblProtists; EJK67551; EJK67551; THAOC_11394. DR Proteomes; UP000007974; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 2. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000007974}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000007974}. FT DOMAIN 1 338 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 797 AA; 87105 MW; D27032449CC8274D CRC64; MRALKRTLDA GGHSLLEMPT GTGKTVCLLS LITSYQHANP GCGKLVYCTR TVPEMDSVMQ ELGNVLGYRS EMLKKEREAA EAAAEAEGGD EGMDGEGPGG DQGESRKRKR DDPPRPKSNN DTHRMGPITQ DGGAGGNGSL ALCLSSRRNM CINKRVLRES DREGIDSACR SLTASWALEA RKKKSGRGGP PGGSGTAAAR GGDDENCCTY FDQFREAGEA ISMPSGIYDL ESLKEWGKGR GWCPYYLTRQ AINHANVLCF NYQYMLDPKV AKMVSKELEA ESIVVFDEAH NIDSVCIEAF SVSIHARSLE QATRSLGRLS GEINRVKASD ASRLRNEYQN LVQGLVEQGL LGGASDEVAL ESSVLSNDVI SEAVPGNIRR AEHFVAFMKK VVEHLKARLR TVGGPTGGVS SETPLAFLHR MVTATGVEAK PLKFAYTRLS SLLRTLQVTS LDDFRSLTDV ADLASLVATY AEGLPRFAII MEPVGQLSEP SIELACLDSS LAIAPLFKRF GSVIITSGTL SPIDLYPKLL QFEPCVSESF SMSTFRPCIR PLIITRGSDQ LPVSTKFQDR GDLGVVRNYG SMLVEVCAAV PDGVVAFFTS YAYMESIISE WDGMGIMRRL AKSKLIFVET KDVVETTLAL DNYRRACDSG RGAIFLSIAR GKVSEGINFD RHYGRAVIIF GVPFQYTLSH ILRARLEFLQ SQYQIREQDF LNFDALRQAS QCVGRVISFW GKCVGGIGSF HTGNLSEFIM PSDGQLNLST DTAVAQAKSF LRIMAQPVDQ NALKQVLLTE EEVRRLA // ID K1PYR9_CRAGI Unreviewed; 1184 AA. AC K1PYR9; DT 28-NOV-2012, integrated into UniProtKB/TrEMBL. DT 28-NOV-2012, sequence version 1. DT 11-MAY-2016, entry version 21. DE SubName: Full=TFIIH basal transcription factor complex helicase subunit {ECO:0000313|EMBL:EKC24234.1}; GN ORFNames=CGI_10011282 {ECO:0000313|EMBL:EKC24234.1}; OS Crassostrea gigas (Pacific oyster) (Crassostrea angulata). OC Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; OC Ostreoida; Ostreoidea; Ostreidae; Crassostrea. OX NCBI_TaxID=29159 {ECO:0000313|EMBL:EKC24234.1, ECO:0000313|Proteomes:UP000005408}; RN [1] {ECO:0000313|EMBL:EKC24234.1, ECO:0000313|Proteomes:UP000005408} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=05x7-T-G4-1.051#20 {ECO:0000313|EMBL:EKC24234.1}; RX PubMed=22992520; DOI=10.1038/nature11413; RA Zhang G., Fang X., Guo X., Li L., Luo R., Xu F., Yang P., Zhang L., RA Wang X., Qi H., Xiong Z., Que H., Xie Y., Holland P.W.H., Paps J., RA Zhu Y., Wu F., Chen Y., Wang J., Peng C., Meng J., Yang L., Liu J., RA Wen B., Zhang N., Huang Z., Zhu Q., Feng Y., Mount A., Hedgecock D., RA Xu Z., Liu Y., Domazet-Loso T., Du Y., Sun X., Zhang S., Liu B., RA Cheng P., Jiang X., Li J., Fan D., Wang W., Fu W., Wang T., Wang B., RA Zhang J., Peng Z., Li Y., Li N., Wang J., Chen M., He Y., Tan F., RA Song X., Zheng Q., Huang R., Yang H., Du X., Chen L., Yang M., RA Gaffney P.M., Wang S., Luo L., She Z., Ming Y., Huang W., Zhang S., RA Huang B., Zhang Y., Qu T., Ni P., Miao G., Wang J., Wang Q., RA Steinberg C.E.W., Wang H., Li N., Qian L., Zhang G., Li Y., Yang H., RA Liu X., Wang J., Yin Y., Wang J.; RT "The oyster genome reveals stress adaptation and complexity of shell RT formation."; RL Nature 490:49-54(2012). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; JH816328; EKC24234.1; -; Genomic_DNA. DR EnsemblMetazoa; EKC24234; EKC24234; CGI_10011282. DR InParanoid; K1PYR9; -. DR OMA; IKITRRT; -. DR Proteomes; UP000005408; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0008168; F:methyltransferase activity; IEA:InterPro. DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR019369; Efm5. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR InterPro; IPR017921; Znf_CTCHY. DR InterPro; IPR001594; Znf_DHHC_palmitoyltrfase. DR InterPro; IPR010666; Znf_GRF. DR Pfam; PF06733; DEAD_2; 3. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR Pfam; PF10237; N6-adenineMlase; 1. DR Pfam; PF06839; zf-GRF; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 2. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 2. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. DR PROSITE; PS51270; ZF_CTCHY; 1. DR PROSITE; PS50216; ZF_DHHC; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EKC24234.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000005408}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EKC24234.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EKC24234.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EKC24234.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000005408}. FT DOMAIN 288 349 CTCHY-type. FT {ECO:0000259|PROSITE:PS51270}. FT DOMAIN 308 344 DHHC-type. {ECO:0000259|PROSITE:PS50216}. FT DOMAIN 387 648 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 673 700 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 1184 AA; 135710 MW; E889AF41F48B5FFC CRC64; MAANISDTDV IIDTEGITVP ECAHGPALMF VRYSGSDAGR RFFACSAFRD RKDCSFFQWC DEKVSQEKLE MRKVINKSMQ PKYSHRQYRE RFQLVLKGIH KNERQLCRTC GLFLLPDEEK EHEDHNILNK INKALLKLPS QLFTPLDNNK TYAQYLFSKK TVAFVLEQLK SLNKTHVICL GAPRIHEAIM NEENGMLKSY LLDLDFRYMQ VCGPENFSRY NMFNHHFFDG ERSVKFLTKF LTGCSHDQVA MVDYDNHTLF RGDVKKHGSP VRIFTNIHPQ KIKLSADEGY RFCAVCKRYS AKENIHCDVC DSCPTKYGAT YRHCFKCDRC IKPSKEHCEV CRTCQLKGHS CDKPSQGCHI CGALDHKRRE CPEKGSQKAS KRLNIDGLLV YFPYDYIYPE QYMYMLELKK SLDAKGHCAL EMPSGTGKTI SLLSLIVAYM KANPLEVTKL IYCSRTVPEL EKVVAELKNL MDYYEQQLGK GKPKILGLAL SSRKNLCINP EVSQERDGKN VDALCHKLTA SFVRANHKRD ATVPVCSFYE SYDAHGKEMP LPEGVYGLIT HANIVVYSYY YLLDPKIAEV VSKELSKNAV VVFDEAHNID NVCIESMSIK ITRRTLDKCQ QNIDGLSKQI QSYYYLLDPK IAEVVSKELS KNAVVVFDEA HNIDNVCIES MSIKITRRTL DKCQQNIDGL SKQIQRLKDC DAERLKTEYQ KLVQGLRDAN IARETDVILA NPVLPDDVLK EAVPGNIRTA EHFLGFMKRF LEYMKIRLRV QHVVSESPPS FLKDCYQKVC IERKPLRFCA ERLNSMMRTL ELVEIHDFSA LSLLCHFATL VSTYAKGFVL IIEPFDDRTP TISNPILHFS CMDASIAIKP VFDRFQTVVI TSGTLSPLEM YPRILDFRPV TMATFTMTLA RTCICPMVVS KGNDQVAMTS KYETREDVAV IRNYGNLLVE FCSIVPDGIV CFFTSYIYME STVAAWYEQG ILDQVQKHKL LFIETQDAAE TSLALLNYQK ACENGRGAVL LSVARGKVSE GIDFDHHFGR AVIMFGIPYV YTQSKILKAR LEYLRDQYQI RENDFLTFDA MRHAAQCVGR ALRGKTDYGI MVFADKRFAR ADKRSKIPRW IQEYLKDGLC NLSVDEAVQV SKRFLRQMAQ PFSREDQLGL SLLTVEQLDQ EDTKKKLQSR MQYV // ID K1W499_TRIAC Unreviewed; 550 AA. AC K1W499; DT 28-NOV-2012, integrated into UniProtKB/TrEMBL. DT 28-NOV-2012, sequence version 1. DT 11-MAY-2016, entry version 24. DE SubName: Full=General RNA polymerase II transcription factor {ECO:0000313|EMBL:EKD03668.1}; GN ORFNames=A1Q2_02014 {ECO:0000313|EMBL:EKD03668.1}; OS Trichosporon asahii var. asahii (strain CBS 8904) (Yeast). OC Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; OC Tremellomycetes; Tremellales; Trichosporonaceae; Trichosporon. OX NCBI_TaxID=1220162 {ECO:0000313|EMBL:EKD03668.1, ECO:0000313|Proteomes:UP000006757}; RN [1] {ECO:0000313|EMBL:EKD03668.1, ECO:0000313|Proteomes:UP000006757} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=CBS 8904 {ECO:0000313|EMBL:EKD03668.1, RC ECO:0000313|Proteomes:UP000006757}; RX PubMed=23193141; DOI=10.1128/EC.00264-12; RA Yang R.Y., Li H.T., Zhu H., Zhou G.P., Wang M., Wang L.; RT "Genome sequence of the Trichosporon asahii environmental strain CBS RT 8904."; RL Eukaryot. Cell 11:1586-1587(2012). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00051130}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00051146}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:EKD03668.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AMBO01000242; EKD03668.1; -; Genomic_DNA. DR EnsemblFungi; EKD03668; EKD03668; A1Q2_02014. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000006757; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 2. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00491; HELICc2; 1. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00442371}; KW Complete proteome {ECO:0000313|Proteomes:UP000006757}; KW Helicase {ECO:0000256|SAAS:SAAS00442371}; KW Hydrolase {ECO:0000256|SAAS:SAAS00442371}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00442371}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000006757}. FT DOMAIN 1 86 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 550 AA; 62641 MW; C3A962E9939BC40C CRC64; MPYVDVIIYS FHYLLDPKVA EQVSAELSKE AIVVFDEAHN IGELSNADLA DTRQSARSVA KIGDKIDEIK KSDAEKLNAE YQKLVDGLAA ANDRREEDDM LSNPVLSEDM IQEAIPGNIR KAEHFIAFLK RFIEYLKTRM RVLHVVAETP QSFMAHLKEI TFIEKRPLQF CAERLTSLIR TLELTNLDEH FALQKIASFG TLVATYEKGF LLILEPYETE HATVPNPIFH FTCLDPSLAM APVFERFSSV IITSGTISPL DMYPKMLQFQ PVIQESYPMT LTRNAFLPMV ITRGSDQVPI SSRFEVRNDP AVVRNFGSIL IDMAKTVPDG VVAFFPSYLY MESIVSAWYD MGILSEVWKH KLLFVETPDA METSIALKNY REYTESRILK ARLEFLRDNH RIRENDYLTF DAMRHAAQCV GRVLRGKTDW GLMVFADKDK RAKLPRWINQ YITDAHSNLS TDMAVVLAKK FIRNISQPFD HTQTGISLWT LEDIEERQRK DREEAERAGT MVDDAFGPSV SNGDKAPEDV DMDGHFDIDD AALAAVDMPD // ID K1WUH5_MARBU Unreviewed; 786 AA. AC K1WUH5; DT 28-NOV-2012, integrated into UniProtKB/TrEMBL. DT 28-NOV-2012, sequence version 1. DT 11-MAY-2016, entry version 25. DE SubName: Full=Tfiih complex helicase {ECO:0000313|EMBL:EKD12258.1}; GN ORFNames=MBM_09579 {ECO:0000313|EMBL:EKD12258.1}; OS Marssonina brunnea f. sp. multigermtubi (strain MB_m1) (Marssonina OS leaf spot fungus). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; OC Helotiales; Dermateaceae; Marssonina. OX NCBI_TaxID=1072389 {ECO:0000313|EMBL:EKD12258.1, ECO:0000313|Proteomes:UP000006753}; RN [1] {ECO:0000313|EMBL:EKD12258.1, ECO:0000313|Proteomes:UP000006753} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=MB_m1 {ECO:0000313|EMBL:EKD12258.1, RC ECO:0000313|Proteomes:UP000006753}; RX PubMed=22876864; DOI=10.1186/1471-2164-13-382; RA Zhu S., Cao Y.-Z., Jiang C., Tan B.-Y., Wang Z., Feng S., Zhang L., RA Su X.-H., Brejova B., Vinar T., Xu M., Wang M.-X., Zhang S.-G., RA Huang M.-R., Wu R., Zhou Y.; RT "Sequencing the genome of Marssonina brunnea reveals fungus-poplar co- RT evolution."; RL BMC Genomics 13:382-382(2012). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; JH921460; EKD12258.1; -; Genomic_DNA. DR RefSeq; XP_007297468.1; XM_007297406.1. DR EnsemblFungi; EKD12258; EKD12258; MBM_09579. DR GeneID; 18765514; -. DR KEGG; mbe:MBM_09579; -. DR InParanoid; K1WUH5; -. DR KO; K10844; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000006753; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EKD12258.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000006753}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EKD12258.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EKD12258.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EKD12258.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000006753}. FT DOMAIN 1 271 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 711 734 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 786 AA; 89013 MW; 8D0FCA4F6848DD5A CRC64; MCDLKRTLDA GGHCVLEMPS GTGKTVSLLS LIVAYQQYYP EHRKLIYCSR TMSEIEKALF ELEALMKYRA EMLGHEEEFR GLGLTSRKNL CLHPSVKREK SGTVVDARCR SLTAGFVKEK KERGEDVPVC IYHDNLDLLE PHDLIPNGVW TFEGILKYGE EHKQCPYFTS RRMMSFCNVI IYSYHYLLDP KIAERVSKEL SKDCIVVFDE AHNIDNVCIE SLSTDITEDS LRKATRGAQN LEIKITDMKN SDADKLKSEY AKLVEGLRDA DDARQEDAFM SNPALPDDLL KEAVPGNIRR AEHFITSESD LLQTRMKVRQ VISETPPSFL AHLKEYTFIE KKPLRFCAER LTSLVRTLEL TNIEDYQPLQ EVATFATLVA TYEKGFVLIL EPYESDTAEV PNPVLHFACL DAAIAIKPVF DRFSSVIITS GTISPLEMYP KMLGFTAVVQ ESYTMTLARR SFLPMIVTRG SDQVAISSGF QVRNEPSVVR NYGHLLTEFS KLTPDGMVVF FPSYLYMESI ISMWQGMGIL DEVWKNKLIL VETPDAQETS LALDTYRTAC NNGRGAILLC VARGKVSEGI DFDNQYGRTV LCIGVPFQYT ESRILKARLE FLRETYRIRE NDFLSFDAMR HAAQCLGRVL RGKDDYGIMV LADRRFLKKR NQLPKWIDDA MHEAEVNLST DTAVGTAKKF LRGMAQPFQA SDQEGISTWS LEDLEAHREK VDEENIRLLR EEERRAVEGG RGGVDDGEDD DDEMGGLGNG NRRGGEPDQY GFDEDDEDAL MAMGAN // ID K2SXA2_MACPH Unreviewed; 788 AA. AC K2SXA2; DT 28-NOV-2012, integrated into UniProtKB/TrEMBL. DT 28-NOV-2012, sequence version 1. DT 11-MAY-2016, entry version 21. DE SubName: Full=Xeroderma pigmentosum group D protein {ECO:0000313|EMBL:EKG21185.1}; GN ORFNames=MPH_01447 {ECO:0000313|EMBL:EKG21185.1}; OS Macrophomina phaseolina (strain MS6) (Charcoal rot fungus). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; OC Dothideomycetes; Dothideomycetes incertae sedis; Botryosphaeriales; OC Botryosphaeriaceae; Macrophomina. OX NCBI_TaxID=1126212 {ECO:0000313|EMBL:EKG21185.1, ECO:0000313|Proteomes:UP000007129}; RN [1] {ECO:0000313|EMBL:EKG21185.1, ECO:0000313|Proteomes:UP000007129} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=MS6 {ECO:0000313|EMBL:EKG21185.1, RC ECO:0000313|Proteomes:UP000007129}; RX PubMed=22992219; DOI=10.1186/1471-2164-13-493; RA Islam M.S., Haque M.S., Islam M.M., Emdad E.M., Halim A., RA Hossen Q.M.M., Hossain M.Z., Ahmed B., Rahim S., Rahman M.S., RA Alam M.M., Hou S., Wan X., Saito J.A., Alam M.; RT "Tools to kill: Genome of one of the most destructive plant pathogenic RT fungi Macrophomina phaseolina."; RL BMC Genomics 13:493-493(2012). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:EKG21185.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AHHD01000055; EKG21185.1; -; Genomic_DNA. DR EnsemblFungi; EKG21185; EKG21185; MPH_01447. DR InParanoid; K2SXA2; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000007129; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000007129}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000007129}. FT DOMAIN 7 284 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 248 275 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 788 AA; 90233 MW; CA99D9A0513B3912 CRC64; MKFNIDELPV LFPYPRIYPE QYKYMCDLKR TLDAGGNCIL EMPSGTGKTV SLLSLIIAYQ QHQPEKRKLI YCSRTMSEIE KALHELKALM KYRTEQLGYE EDFRGLGLTS RKNLCLHPSV KREKNGAVVD ARCRSLTAGF VKEKKERGED VDLCIYHDNL DLLEPHNLIP PGVFTFDDIL RYGEDHKQCP YFTARRMMPF CNVIIYSYHY LLDPKIAERV SKELSKDCIV VFDEAHNIDN VCIESLSIDL TEDSLRKATR GAHNLERKIT EMKATDAEKL SNEYKKLVEG LREADQARDE DAFMSNPALP DDLLKEAVPG NIRRAEHFVS FLKRFIEYLK TRMKVLHVVA ETPPSFLNHL KELTFIERKP LRFCAERLTS LVRTLELTNI EDYQPLQEVA TFATLVATYE TGFLLILEPY EAEGATVPNP IFHFTCLDAS IAIKPVFERF SSVIITSGTI SPLDMYPKML NFSTVVQESY TMTLARKSFL PMIVTRGSDQ AAISSSFGVR NDPNVVKNYG VLLREFCKLT PDGIVVFFPS YLYMESVISQ WQGMGILDDV WRYKLILVET PDAQETSLAL ETYRTACNNG RGAVLLCVAR GKVSEGIDFD HHYGRTVLCI GVPFQYTESR ILKARLEFLR ETYHIRENDF LSFDAMRHAA QCLGRVLRGK DDYGIMVLAD KRFRNKRTQL PKWIAQHLSD ADANMSIDQA AAMAKKFLRD MSKSYGHQLA EGISVWGVED LRKFQKQQQE DEIRTLMDVP DREVRMRDAP DEFDVGGDMD EVMAGVEA // ID K3W0Z2_FUSPC Unreviewed; 789 AA. AC K3W0Z2; DT 28-NOV-2012, integrated into UniProtKB/TrEMBL. DT 28-NOV-2012, sequence version 1. DT 11-MAY-2016, entry version 24. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EKJ74995.1}; GN ORFNames=FPSE_04815 {ECO:0000313|EMBL:EKJ74995.1}; OS Fusarium pseudograminearum (strain CS3096) (Wheat and barley crown-rot OS fungus). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; OC Sordariomycetes; Hypocreomycetidae; Hypocreales; Nectriaceae; OC Fusarium. OX NCBI_TaxID=1028729 {ECO:0000313|EMBL:EKJ74995.1, ECO:0000313|Proteomes:UP000007978}; RN [1] {ECO:0000313|EMBL:EKJ74995.1, ECO:0000313|Proteomes:UP000007978} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=CS3096 {ECO:0000313|EMBL:EKJ74995.1, RC ECO:0000313|Proteomes:UP000007978}; RX PubMed=23028337; DOI=10.1371/journal.ppat.1002952; RA Gardiner D.M., McDonald M.C., Covarelli L., Solomon P.S., Rusu A.G., RA Marshall M., Kazan K., Chakraborty S., McDonald B.A., Manners J.M.; RT "Comparative pathogenomics reveals horizontally acquired novel RT virulence genes in fungi infecting cereal hosts."; RL PLoS Pathog. 8:E1002952-E1002952(2012). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:EKJ74995.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AFNW01000099; EKJ74995.1; -; Genomic_DNA. DR RefSeq; XP_009256208.1; XM_009257933.1. DR EnsemblFungi; EKJ74995; EKJ74995; FPSE_04815. DR GeneID; 20363433; -. DR KEGG; fpu:FPSE_04815; -. DR InParanoid; K3W0Z2; -. DR KO; K10844; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000007978; Chromosome 2. DR GO; GO:0000439; C:core TFIIH complex; IEA:EnsemblFungi. DR GO; GO:0005675; C:holo TFIIH complex; IEA:EnsemblFungi. DR GO; GO:0000112; C:nucleotide-excision repair factor 3 complex; IEA:EnsemblFungi. DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:EnsemblFungi. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0043141; F:ATP-dependent 5'-3' DNA helicase activity; IEA:EnsemblFungi. DR GO; GO:0003684; F:damaged DNA binding; IEA:EnsemblFungi. DR GO; GO:0033683; P:nucleotide-excision repair, DNA incision; IEA:EnsemblFungi. DR GO; GO:0070816; P:phosphorylation of RNA polymerase II C-terminal domain; IEA:EnsemblFungi. DR GO; GO:0045951; P:positive regulation of mitotic recombination; IEA:EnsemblFungi. DR GO; GO:0010525; P:regulation of transposition, RNA-mediated; IEA:EnsemblFungi. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:EnsemblFungi. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000007978}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000007978}. FT DOMAIN 7 284 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 255 297 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 789 AA; 91060 MW; F548AE0159ADCCDC CRC64; MKFNIDDLPV LFPYPRIYPE QYAYMCDLKK TLDAGGHCVL EMPSGTGKTV SLLSLIVAYQ QYMPEKRKLI YCSRTMSEIE KALVELKSLM KYRAEELGYE EEFRGLGLTS RKNLCLHPSV KREKSGAIVD ARCRSLTAGF VKEKKERGEN VDVCVYHDNL DLLEPHNLIP NGVWSFDDII RYGEEQKQCP YFTARRMMQY CNVVIFSYHY LLDPKIAERV SKDFSKDCIV VFDEAHNIDN VCIESLSTDI TEDSLRKATR GAQNLENKIS QMRDTDQEQL QNEYQKLVQG LRDADEARQE DAFMANPALP EDLLKEAVPG NIRRAEHFIA FLKRFIEYLK TRMKVRQVIS ETPPSFLSHL REHTFIEKKP LRFCAERLTS LVRTLELTNI EDYQPLQEVA TFATLVATYE KGFLLILEPF ESDTAEVPNP VLHFTCLDAA IAIKPVFDRF YSVIITSGTI SPLEIYPKML DFQTVIQESY AMTLARRSFM PMIVTRGSDQ ASVSTSFQVR NEPSVVRNYG NLLTEFAKIT PDGMVVFFPS YLYMESIISM WQGMGVLDEV WKYKLILVET PDAQETSLAL ETYRTACCNG RGAVLLCVAR GKVSEGIDFD HQYGRTVLCI GVPFQYTESR ILKARLQFLR ETYRIKENDF LSFDAMRHAA QCLGRVLRGK DDYGIMVLAD RRFQKKRTQL PKWINQGLQE SDVNLSTDMA VSSARRFLRT MAQPFRAKDQ EGISTWGYKD LMEHKEKMDL ERIKELEEEA QRPQPAAQEN NFEYDDDELD QDMMEMDGF // ID K3WFP6_PYTUL Unreviewed; 794 AA. AC K3WFP6; DT 28-NOV-2012, integrated into UniProtKB/TrEMBL. DT 28-NOV-2012, sequence version 1. DT 11-MAY-2016, entry version 27. DE SubName: Full=Uncharacterized protein {ECO:0000313|EnsemblProtists:PYU1_T003787}; GN Name=PYU1_G003777 {ECO:0000313|EnsemblProtists:PYU1_T003787}; OS Pythium ultimum DAOM BR144. OC Eukaryota; Stramenopiles; Oomycetes; Pythiales; Pythiaceae; Pythium. OX NCBI_TaxID=431595 {ECO:0000313|EnsemblProtists:PYU1_T003787, ECO:0000313|Proteomes:UP000019132}; RN [1] {ECO:0000313|EnsemblProtists:PYU1_T003787} RP IDENTIFICATION. RC STRAIN=DAOM BR144 {ECO:0000313|EnsemblProtists:PYU1_T003787}; RG EnsemblProtists; RL Submitted (FEB-2015) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GL376638; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EnsemblProtists; PYU1_T003787; PYU1_T003787; PYU1_G003777. DR InParanoid; K3WFP6; -. DR Proteomes; UP000019132; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000019132}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000019132}. FT DOMAIN 7 286 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 794 AA; 89766 MW; A76675CFA09867BC CRC64; MRVEIDGLEV LFPYERMYAE QLQYMRELKR ALDAHGHCML EMPTGTGKTV SLLSLVLAYK FAHPTAGKLI YCTRTVPEMA KCVEELKNLV AYRKKYYGER ADLTAVCLSS RRNMCVHPRV MAHADGEAVD GQCRKMTASW VRTKAVTHPG EVEVCSFYEN YESRKSDETV LPAGIYNVDD LKELGVQKGW CPYFLTRYVV SFADVIVYNY QYMLDPKVSA MVSRSFEKES IVVFDEAHNI DNVCIEALSV ELDRRSLDRA SRNLTTISSQ VNRMKQADKA RLDAEYRRLV EGLRSSDAVV APTYTNPNTQ QHIDTSNDIL MANPVLPDDV LDEAIPGNIR RAEHFIAFMR RLIEYLRTRI RVRNVESETP QAFLHHLNQA ISMETKPMKF CYTRLNSLMR TLEVTNLEEF NSLAAVADFA TLVATYADGF MLIIEPYDGQ SGVHDPVLQL ACLDASLAIR PVFERFSSVI ITSGTLSPID LYPRLLNFNP VIRESLPMSV YRSCICPMVI TRGSDQMPVS TKFDLRDDMS VVRNYGTLLL EMAASCPDGM VCFFPSYLYM EKIIGQWDSL GVLKRVLQSK LLFIETTDIV ETTLALDNYK KACDCGRGAI FFSVARGKVA EGIDFDRHYG RAVILFGIPF QYTLSNKLRA RLEYLRYTHQ IREGDFLTFD ALRQAAQCAG RVLRSKTDYG LIIFADSRYN RLDKRTKLPP WITQFLVDSH LNLSVDMAVF MAKKYLSLMA QPVDDATNVN SILLDTDGVA RWLGKHSITN GDENAIGTSS SNAANGVAPI EVAQ // ID K3Z428_SETIT Unreviewed; 758 AA. AC K3Z428; DT 28-NOV-2012, integrated into UniProtKB/TrEMBL. DT 28-NOV-2012, sequence version 1. DT 11-MAY-2016, entry version 30. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KQL13317.1, ECO:0000313|EnsemblPlants:Si021296m}; GN Name=Si021296m.g {ECO:0000313|EnsemblPlants:Si021296m}; GN ORFNames=SETIT_021296mg {ECO:0000313|EMBL:KQL13317.1}; OS Setaria italica (Foxtail millet) (Panicum italicum). OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; OC PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria. OX NCBI_TaxID=4555 {ECO:0000313|EnsemblPlants:Si021296m}; RN [1] {ECO:0000313|EMBL:KQL13317.1, ECO:0000313|EnsemblPlants:Si021296m, ECO:0000313|Proteomes:UP000004995} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=cv. Yugu1 {ECO:0000313|EnsemblPlants:Si021296m, RC ECO:0000313|Proteomes:UP000004995}, and RC Yugu1 {ECO:0000313|EMBL:KQL13317.1}; RX PubMed=22580951; DOI=10.1038/nbt.2196; RA Bennetzen J.L., Schmutz J., Wang H., Percifield R., Hawkins J., RA Pontaroli A.C., Estep M., Feng L., Vaughn J.N., Grimwood J., RA Jenkins J., Barry K., Lindquist E., Hellsten U., Deshpande S., RA Wang X., Wu X., Mitros T., Triplett J., Yang X., Ye C.Y., RA Mauro-Herrera M., Wang L., Li P., Sharma M., Sharma R., Ronald P.C., RA Panaud O., Kellogg E.A., Brutnell T.P., Doust A.N., Tuskan G.A., RA Rokhsar D., Devos K.M.; RT "Reference genome sequence of the model plant Setaria."; RL Nat. Biotechnol. 30:555-561(2012). RN [2] {ECO:0000313|EnsemblPlants:Si021296m} RP IDENTIFICATION. RC STRAIN=Yugu1 {ECO:0000313|EnsemblPlants:Si021296m}; RG EnsemblPlants; RL Submitted (OCT-2012) to UniProtKB. RN [3] {ECO:0000313|EMBL:KQL13317.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=Yugu1 {ECO:0000313|EMBL:KQL13317.1}; RA Cajimat M.N.B., Milazzo M.L., Fulhorst C.F.; RL Submitted (JUL-2015) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CM003530; KQL13317.1; -; Genomic_DNA. DR RefSeq; XP_004960471.1; XM_004960414.3. DR STRING; 4555.Si021296m; -. DR EnsemblPlants; Si021296m; Si021296m; Si021296m.g. DR GeneID; 101753075; -. DR Gramene; Si021296m; Si021296m; Si021296m.g. DR KEGG; sita:101753075; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; K3Z428; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR Proteomes; UP000004995; Chromosome III. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0000724; P:double-strand break repair via homologous recombination; IEA:EnsemblPlants. DR GO; GO:0010286; P:heat acclimation; IEA:EnsemblPlants. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR GO; GO:0045893; P:positive regulation of transcription, DNA-templated; IEA:EnsemblPlants. DR GO; GO:0043687; P:post-translational protein modification; IEA:EnsemblPlants. DR GO; GO:0006457; P:protein folding; IEA:EnsemblPlants. DR GO; GO:0009644; P:response to high light intensity; IEA:EnsemblPlants. DR GO; GO:0042542; P:response to hydrogen peroxide; IEA:EnsemblPlants. DR GO; GO:0010212; P:response to ionizing radiation; IEA:EnsemblPlants. DR GO; GO:0009411; P:response to UV; IEA:EnsemblPlants. DR GO; GO:0000394; P:RNA splicing, via endonucleolytic cleavage and ligation; IEA:EnsemblPlants. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:EnsemblPlants. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000004995}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000004995}. FT DOMAIN 7 288 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 758 AA; 85809 MW; CF9EE1B753CC7B37 CRC64; MRFDLDGMPV HFPYAAIYPE QHAYMGELKR ALDARGHALL EMPTGTGKTA ALISLITSYS LANPSRPLRL IYCTRTVHEM EKTLAELRLL FAHLPPAASR SLLALGLSSR KNLCVHPQAS AAAARDSVDT ACRRLTASWV REKAASDPES TPLCEFYETF DRAAAAGDLA SLMPPGVYTL ADLRALGRQR RVCPYFLARQ MVKYANVVVY SYQYLLDPKV ASIVSREMQK ECVVVFDEAH NIDNVCIEAL SVSIRKQTLE GAERNLRRIS QEIDRFKATD ANRLRAEYNR LVDGLAQRGN LPISDAWLAN PALPDDILRE AVPGNIRRAE HFLAVLRRLV RFLDGRLETE NVENEMPIAF VASIHSSAGI DQKMLRFCYD RLHSLMMTLE ITDTDEFMHI QTICDFATLI GTYTRGFSII IEPYDERMPD IRDPVIQLSC HDASLAIRPV FDRFETVVIT SGTLSPIDLY PRLLNFNPVI SRSFTMSLTR DCICPMVLTR GSDQLPVSTK FDMRSDPGVV RNYGRLLLEM ASAVPDGIVC FFVSYSYMDG IVNSWHEMGI LQDIMQYKLV FIETPDVVET TLALDNYRKA CDCGRGAVFF SVARGKVAEG IDFDRHYGRL VIMFGVPFQY TLSRILLARL EYLRETFQIK EGDFLTFDAL RQAAQCVGRV IRSKADYGMM IFADKRYSRH DKRSKLPGWI LSHLHDAHLN LSTDMALHIA REFLRRMAQP YDKTGSGGKK TLLTEEDLQN MAQDEMEM // ID K4C3S7_SOLLC Unreviewed; 758 AA. AC K4C3S7; DT 28-NOV-2012, integrated into UniProtKB/TrEMBL. DT 28-NOV-2012, sequence version 1. DT 11-MAY-2016, entry version 29. DE SubName: Full=Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc06g008970.2.1}; OS Solanum lycopersicum (Tomato) (Lycopersicon esculentum). OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; OC Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; OC Solaneae; Solanum; Lycopersicon. OX NCBI_TaxID=4081 {ECO:0000313|EnsemblPlants:Solyc06g008970.2.1, ECO:0000313|Proteomes:UP000004994}; RN [1] {ECO:0000313|EnsemblPlants:Solyc06g008970.2.1} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=cv. Heinz 1706 {ECO:0000313|EnsemblPlants:Solyc06g008970.2.1}; RX PubMed=10645957; DOI=10.1101/gr.10.1.129; RA Budiman M.A., Mao L., Wood T.C., Wing R.A.; RT "A deep-coverage tomato BAC library and prospects toward development RT of an STC framework for genome sequencing."; RL Genome Res. 10:129-136(2000). RN [2] {ECO:0000313|EnsemblPlants:Solyc06g008970.2.1} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=cv. Heinz 1706 {ECO:0000313|EnsemblPlants:Solyc06g008970.2.1}; RX PubMed=16208505; DOI=10.1007/s00122-005-0107-z; RA Wang Y., van der Hoeven R.S., Nielsen R., Mueller L.A., Tanksley S.D.; RT "Characteristics of the tomato nuclear genome as determined by RT sequencing undermethylated EcoRI digested fragments."; RL Theor. Appl. Genet. 112:72-84(2005). RN [3] {ECO:0000313|EnsemblPlants:Solyc06g008970.2.1} RP IDENTIFICATION. RC STRAIN=cv. Heinz 1706 {ECO:0000313|EnsemblPlants:Solyc06g008970.2.1}; RG EnsemblPlants; RL Submitted (JUN-2015) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR RefSeq; XP_004240533.1; XM_004240485.2. DR STRING; 4081.Solyc06g008970.2.1; -. DR PaxDb; K4C3S7; -. DR EnsemblPlants; Solyc06g008970.2.1; Solyc06g008970.2.1; Solyc06g008970.2. DR GeneID; 101255497; -. DR Gramene; Solyc06g008970.2.1; Solyc06g008970.2.1; Solyc06g008970.2. DR KEGG; sly:101255497; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; K4C3S7; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR Proteomes; UP000004994; Chromosome 6. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000004994}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000004994}. FT DOMAIN 7 287 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 758 AA; 85970 MW; A3246A2BA69FB343 CRC64; MKFQLEDVTI YFPYDNIYPE QYQYMLELKR ALDAKGHCLL EMPTGTGKTI ALLSLITSYR LSKPSNPIKL LYCTRTVHEM EKTLAELKLL YNYQLQHFGP GARMLAIGLS SRKNLCVNPS VVSAENRDSV DAGCRKLTAS WVRAIAVENP NIPTCSYYEN YDTADKAGTS TLPAGVYTLQ ELRLFGKEKG WCPYFLARHM VQQANVVVYS YQYLLDPKVA GIISKEMERE CVVVFDEAHN IDNVCIEALS VSVRKQTLEG ATRNLSRMSN EIERLKATDA GRLRVEYNRL VEGLAQRLPA QDVWLANPAL PDDIMKEAVP GNIRKAEHFL SVLRRFVQYL NGRLETDNVE KEGPVAFVAS INTQVGIDQK MLKFCYDRLH SLMLTLEITD TDEFLHIQTV CDLATLVGTY ARGFSIIIEP YDERMPHIPD PVLQLTCHDA SLAIKPVFER FQSVVITSGT LSPIDLYPRL LNFNPVVSRS FKMSLTRDCI CPMVLTRGSD QLPVSTKYDL RSDPGVEKNY GKLLLEMVSV VPDGVVCFFV SYSYMDGIVN SWHESGILKD IMQHKLVFIE TQDVVETTLA LDNYRKACDS GRGAVFFSVA RGKVAEGIDF DRHYGRLVIM FGVPFQYTLS RILLARLEYL RETFQIKEGD FLTFDALRQA AQCVGRVIRS KADYGMMIFA DKRYSRHDKR SKLPGWILSH LRDAHLNLST DMAVYIAKEF LRKMAQPYDK NGALGKKTLL SQEDLENMIT GPDGEMLL // ID K4EBM5_TRYCR Unreviewed; 780 AA. AC K4EBM5; DT 28-NOV-2012, integrated into UniProtKB/TrEMBL. DT 28-NOV-2012, sequence version 1. DT 11-MAY-2016, entry version 21. DE SubName: Full=TFIIH basal transcription factor complex helicase subunit, putative {ECO:0000313|EMBL:EKG07586.1}; GN ORFNames=TCSYLVIO_001284 {ECO:0000313|EMBL:EKG07586.1}; OS Trypanosoma cruzi. OC Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Trypanosoma; OC Schizotrypanum. OX NCBI_TaxID=5693 {ECO:0000313|EMBL:EKG07586.1, ECO:0000313|Proteomes:UP000008313}; RN [1] {ECO:0000313|EMBL:EKG07586.1, ECO:0000313|Proteomes:UP000008313} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Sylvio X10/1 {ECO:0000313|EMBL:EKG07586.1, RC ECO:0000313|Proteomes:UP000008313}; RX PubMed=21408126; DOI=10.1371/journal.pntd.0000984; RA Franzen O., Ochaya S., Sherwood E., Lewis M.D., Llewellyn M.S., RA Miles M.A., Andersson B.; RT "Shotgun sequencing analysis of Trypanosoma cruzi I Sylvio X10/1 and RT comparison with T. cruzi VI CL Brener."; RL PLoS Negl. Trop. Dis. 5:E984-E984(2011). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:EKG07586.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ADWP02006217; EKG07586.1; -; Genomic_DNA. DR STRING; 353153.XP_807386.1; -. DR PaxDb; K4EBM5; -. DR EnsemblProtists; EKG07586; EKG07586; TCSYLVIO_001284. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; K4EBM5; -. DR Proteomes; UP000008313; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EKG07586.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000008313}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EKG07586.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EKG07586.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EKG07586.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000008313}. FT DOMAIN 1 252 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 216 250 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 780 AA; 88290 MW; 7DD1856EABB9D994 CRC64; MTELKKGLDQ GGHIVLEMPS GTGKTTTLLS LLIAYIHYHA DEKRKVIYCT RTVEEMTKTM GELRKLLELW NTDELGSNRP LRGLCLTAKK NLCIESTVAA QRYPEDVDAG CRSLTAPWQT SNRCAYFDNL ERIPFELPPG AYSVEDLKRF GEAHQLCPYY LVRKALRVVD IVVHSFLYIV DPIVAEVTKG YFNENAIVVM DEGHNVDDVC IEAMSLIITK EDAAQAKENV KQLNAAADHL KATNRQQLQD EYDRLVNGLA MVEMARSVDS MMMTVQAPSI PSEIAEEAIP GSLRQANHFL SFIQRLVDFT HRVVCRISRT YVADPLTFLS KVRDECAVDI RHFRYLTERL KVLMNTLQIT NSHKFRNVSL IAQMYMTLST HYTDDRYEKP GFVVVCEAHD PTRPAVPDPV IRLVCVDASL ALREAFSKYR SVVLTSGTLS PLDIYPKILG FTPVIAKSFQ MTLSRKCIAP VVVTRSTESV NITMEEITSS FVVRTNPLAQ DIVSSAYEDL LRGLGKTVPD GIVCFFTGYQ YMGEVLLGWH RSGFLKELAQ YKLIFIETQS VEETSIALAN YRRACDIGRG AIFMAIARGK IAEGIDFDRH YGRAVVMFGV PFLPPNDEPL RQRIYWMETC LGIPGNEYRN FDAMRQASQC IGRVLRNKTD YGMMLLVDRR FALNDKRKKL PIWIQQCLKE NTNLSVDAAI AVARGFFKEM AQPWEHKRDL GTTLFSKETL ALKGFLKPSK RSVPCRVTEK CSNSAEELVH GEGDVIRAVK EPEHRKRLRG // ID K4L8L7_9FIRM Unreviewed; 783 AA. AC K4L8L7; DT 09-JAN-2013, integrated into UniProtKB/TrEMBL. DT 09-JAN-2013, sequence version 1. DT 11-MAY-2016, entry version 21. DE SubName: Full=DinG family ATP-dependent helicase {ECO:0000313|EMBL:AFV06809.1}; GN ORFNames=DCF50_p2806 {ECO:0000313|EMBL:AFV06809.1}; OS Dehalobacter sp. CF. OC Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; OC Dehalobacter. OX NCBI_TaxID=1131462 {ECO:0000313|EMBL:AFV06809.1, ECO:0000313|Proteomes:UP000000482}; RN [1] {ECO:0000313|EMBL:AFV06809.1, ECO:0000313|Proteomes:UP000000482} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=CF {ECO:0000313|EMBL:AFV06809.1}; RX PubMed=23284863; DOI=10.1371/journal.pone.0052038; RA Tang S., Gong Y., Edwards E.A.; RT "Semi-automatic in silico gap closure enabled de novo assembly of two RT dehalobacter genomes from metagenomic data."; RL PLoS ONE 7:E52038-E52038(2012). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP003870; AFV06809.1; -; Genomic_DNA. DR RefSeq; WP_015044838.1; NC_018867.1. DR EnsemblBacteria; AFV06809; AFV06809; DCF50_p2806. DR KEGG; dec:DCF50_p2806; -. DR Proteomes; UP000000482; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 4. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF00270; DEAD; 1. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 5. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000313|EMBL:AFV06809.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000000482}; KW Helicase {ECO:0000313|EMBL:AFV06809.1}; KW Hydrolase {ECO:0000313|EMBL:AFV06809.1}; KW Nucleotide-binding {ECO:0000313|EMBL:AFV06809.1}; KW Reference proteome {ECO:0000313|Proteomes:UP000000482}. FT DOMAIN 181 431 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 783 AA; 89721 MW; CCAD6C08B476EF68 CRC64; MIKLPIRQLV ELIMRCGDID SRYVSKDRMA EGAKAHRILQ KRNRETYEDY RSEVSLSEAY CYNGIDYTLE GRADGIFSCE GRTVIEEIKT TVLPLDSIDK DFSGAHWAQA KCYAYIYAVQ NALTEAAVQL TYFNLETNET KQWLNFFAIS ELTEFIGSLI QKYSVWASFS AEWAEIRDLS IKTLQFPFPA YRQGQRELAV QAYRAIAGRK KLFVQAPTGT GKTISVLFPA IKAMGEAKTS KLFYLTAKTI TRQVAEEAIE RMRQGGLKMK TLTLTAKEKI CFCEKSVCHP EYCKYAKGHY DRINAAILDA IKESDDLSRS VIEKYAQKHT VCPFELSLDL SLLADCVICD YNYVFDPRAH LRRFFADNSG DYVFLIDEAH NLVDRAREMF SAKLDKTAFY QVKKAYKGRN KALDKILNRI NKRMIDLRHQ CGEQGYLITT EMLADFLSLL QQYTGTCELM LKENRSLSED SAFLQLYFDV LGFTAITEFY DERYVTFVET KRDEVTVKLF CLDPSFLLGE ALKRGSSAVM FSATLSPLEY FREVLGGGEA DHILSLDSPF DHRKLCVLTA DSVSTKYKER EQSAHQITRM IGSFVAQKTG NYIVYFPSYK YMNDVFAEFA SACPDITAVA QEASMAEEER ERFLLSFKEN PEKTYVAFCV LGGIFSEGID LKGSRLIGTA IVSVGLPQLS VQQNIIRDYF NSKNGLGYEY AYMYPGMNKV MQAAGRVIRS ENDIGAVLLI DERYSNKKYI KLFPKHWMRR RNIKDSKSLE KNLGLFWQTW QYR // ID K5W900_PHACS Unreviewed; 792 AA. AC K5W900; DT 09-JAN-2013, integrated into UniProtKB/TrEMBL. DT 09-JAN-2013, sequence version 1. DT 11-MAY-2016, entry version 24. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EKM55444.1}; GN ORFNames=PHACADRAFT_256068 {ECO:0000313|EMBL:EKM55444.1}; OS Phanerochaete carnosa (strain HHB-10118-sp) (White-rot fungus) OS (Peniophora carnosa). OC Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; OC Agaricomycetes; Polyporales; Phanerochaetaceae; Phanerochaete. OX NCBI_TaxID=650164 {ECO:0000313|EMBL:EKM55444.1, ECO:0000313|Proteomes:UP000008370}; RN [1] {ECO:0000313|EMBL:EKM55444.1, ECO:0000313|Proteomes:UP000008370} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=HHB-10118-sp {ECO:0000313|EMBL:EKM55444.1, RC ECO:0000313|Proteomes:UP000008370}; RX PubMed=22937793; DOI=10.1186/1471-2164-13-444; RA Suzuki H., MacDonald J., Syed K., Salamov A., Hori C., Aerts A., RA Henrissat B., Wiebenga A., vanKuyk P.A., Barry K., Lindquist E., RA LaButti K., Lapidus A., Lucas S., Coutinho P., Gong Y., Samejima M., RA Mahadevan R., Abou-Zaid M., de Vries R.P., Igarashi K., Yadav J.S., RA Grigoriev I.V., Master E.R.; RT "Comparative genomics of the white-rot fungi, Phanerochaete carnosa RT and P. chrysosporium, to elucidate the genetic basis of the distinct RT wood types they colonize."; RL BMC Genomics 13:444-444(2012). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; JH930472; EKM55444.1; -; Genomic_DNA. DR RefSeq; XP_007395769.1; XM_007395707.1. DR EnsemblFungi; EKM55444; EKM55444; PHACADRAFT_256068. DR GeneID; 18916475; -. DR KEGG; pco:PHACADRAFT_256068; -. DR InParanoid; K5W900; -. DR KO; K10844; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000008370; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000008370}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000008370}. FT DOMAIN 7 291 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 792 AA; 90238 MW; A6521A3F8E4ED490 CRC64; MKFYIDDLPV IFPYDRIYPE QYSYMCDLKR TLDAGGHCVL EMPSGTGKTV SLLSLIVSYQ QFYPARRKLI YCSRTVPEIE KALAELKRLM EYRLSIAETE EQQAKERGFY GLGLTSRKNL CIHPEVSKEK KGRVVDARCR DLTNSAVCQK GRDNPGSVDL CDWHENLGKL EPGNLIPPGI WTLADVLQYG RDNVVCPYFL VRRMMAFVDV VIYSFHYLLD PKVAEQVSKE MSKDSIVVFD EAHNIDNVCI ESLSIDLTRP MLDSAARSVT RLGDKIEEIK RTDASKLQDE YAKLVEGLQE AATDEDSLVA NPVLPEDLLT EAIPGNIRKA EHFVAFLKRF VEYLKTRMRV LHVVAETPLS FLQHLKDITY IERRPLRFCA ERLQSLVRTL ELNRLDEFSA LQKVASFATL VATYEKGFLL ILEPFETDNA TVPNPIFHFT CLDPSIAIKT VFERFSSVVI TSGTISPLDM YPKMLQFTPV IQESYSMTLT RNSFLPLVIT RGSDQVAISS RFEVRNDPAV VRNFGSILIE YSKIVPDGIV AFFPSYLYME SIVAAWNDMG ILNEVWKYKL IFVETPDANE TSIALENYRR ACDNGRGAVL LSVARGKVSE GIDFDHNYGR AVIMFGVPYQ YTESRILKAR LEYLRDTYRI RESEFLGFDA MRNAAQCVGR VLRGKTDWGL MVFADKRFAR ADKRAKLPRW INQYITETAS NLSTDMAITL SKLFMRTISQ NPNENQTGIS LWTLEDVERQ QAKQKELALE AEKQQPETVQ DDDEYGDGGL DDNTLATIDL DI // ID K5X4D6_AGABU Unreviewed; 792 AA. AC K5X4D6; DT 09-JAN-2013, integrated into UniProtKB/TrEMBL. DT 09-JAN-2013, sequence version 1. DT 11-MAY-2016, entry version 25. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EKM82686.1}; GN ORFNames=AGABI1DRAFT_118129 {ECO:0000313|EMBL:EKM82686.1}; OS Agaricus bisporus var. burnettii (strain JB137-S8 / ATCC MYA-4627 / OS FGSC 10392) (White button mushroom). OC Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; OC Agaricomycetes; Agaricomycetidae; Agaricales; Agaricaceae; Agaricus. OX NCBI_TaxID=597362 {ECO:0000313|EMBL:EKM82686.1, ECO:0000313|Proteomes:UP000008493}; RN [1] {ECO:0000313|Proteomes:UP000008493} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=JB137-S8 / ATCC MYA-4627 / FGSC 10392 RC {ECO:0000313|Proteomes:UP000008493}; RX PubMed=23045686; DOI=10.1073/pnas.1206847109; RA Morin E., Kohler A., Baker A.R., Foulongne-Oriol M., Lombard V., RA Nagy L.G., Ohm R.A., Patyshakuliyeva A., Brun A., Aerts A.L., RA Bailey A.M., Billette C., Coutinho P.M., Deakin G., Doddapaneni H., RA Floudas D., Grimwood J., Hilden K., Kuees U., LaButti K.M., RA Lapidus A., Lindquist E.A., Lucas S.M., Murat C., Riley R.W., RA Salamov A.A., Schmutz J., Subramanian V., Woesten H.A.B., Xu J., RA Eastwood D.C., Foster G.D., Sonnenberg A.S., Cullen D., de Vries R.P., RA Lundell T., Hibbett D.S., Henrissat B., Burton K.S., Kerrigan R.W., RA Challen M.P., Grigoriev I.V., Martin F.; RT "Genome sequence of the button mushroom Agaricus bisporus reveals RT mechanisms governing adaptation to a humic-rich ecological niche."; RL Proc. Natl. Acad. Sci. U.S.A. 109:17501-17506(2012). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; JH971386; EKM82686.1; -; Genomic_DNA. DR RefSeq; XP_007326640.1; XM_007326578.1. DR EnsemblFungi; EKM82686; EKM82686; AGABI1DRAFT_118129. DR GeneID; 18825409; -. DR KEGG; abp:AGABI1DRAFT118129; -. DR InParanoid; K5X4D6; -. DR KO; K10844; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000008493; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 5. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000008493}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000008493}. FT DOMAIN 7 290 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 792 AA; 90229 MW; 8816BD9761231515 CRC64; MKFFIDNLPI IFPYDRIYPE QYAYMCDLKR TLDATGHCVL EMPSGTGKTV SLLSLIVSYQ QFYPTKRKLI YCSRTVPEIE KALTELKRLM KYREEAAESE EEKIRERNYM GLGLTSRKNL CINPEVSREK KGKVVDARCR DLTNSAVCEK GRADPGSVEL CDWHENLGKM EPGHLMPAGI WTLADVLDYG KEQRICPYFA VRRMMPFVDA VIYSFHYLLD PKVAEQVSKE MSKDSIVVFD EAHNIDNVCI ESLSIDLTRP MLDSAVRSVT KLGEKIEEVK TTDAAKLQDE YAKLVEGLQE PDDSDTDNAL ANPVLPEDIL KEAIPGNIRK AEHFVAFLKR FVEYLKTRMR VLHVVAETPL SFLQHLKDIT YIERRPLRFC AERLQSLIRT LELSRLDEHS SLQKVATFAT LVATYEKGFL LILEPFETDN ATVPNPIFHF TCLDPSLAIK PVFERFSSVV ITSGTISPLD MYPKMLQFTP VVQETYSMTL TRNAFLPLVI TRGSDQVAIS SRFEVRNDPA VVRNFGSILV EYSKIVPDGI VAFFPSYLYM ESIVAAWNDM GILNEVWKHK LIFVETPDAN ETSIALENYR RACDNGRGAV LLSVARGKVS EGIDFDHNYG RAVLMFGVPY QYTESRILKA RLEYLRDAYR IRESEFLGFD AMRNAAQCVG RVLRGKTDWG LMVFADKRFA RADKRAKLPR WINQYITETA SNLSTDMAIT LSKLFMRTIS QNPNENQTGI SLWALEDIEK AQAKQKALAS LQEQVDEDDM DEDDKYDDGG IDDQALMSLD IA // ID K7EIT8_HUMAN Unreviewed; 292 AA. AC K7EIT8; DT 09-JAN-2013, integrated into UniProtKB/TrEMBL. DT 09-JAN-2013, sequence version 1. DT 16-MAR-2016, entry version 27. DE SubName: Full=TFIIH basal transcription factor complex helicase XPD subunit {ECO:0000313|Ensembl:ENSP00000464887}; DE Flags: Fragment; GN Name=ERCC2 {ECO:0000313|Ensembl:ENSP00000464887}; OS Homo sapiens (Human). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; OC Catarrhini; Hominidae; Homo. OX NCBI_TaxID=9606 {ECO:0000313|Ensembl:ENSP00000464887, ECO:0000313|Proteomes:UP000005640}; RN [1] {ECO:0000313|Ensembl:ENSP00000464887, ECO:0000313|Proteomes:UP000005640} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RX PubMed=15057824; DOI=10.1038/nature02399; RA Grimwood J., Gordon L.A., Olsen A.S., Terry A., Schmutz J., RA Lamerdin J.E., Hellsten U., Goodstein D., Couronne O., Tran-Gyamfi M., RA Aerts A., Altherr M., Ashworth L., Bajorek E., Black S., Branscomb E., RA Caenepeel S., Carrano A.V., Caoile C., Chan Y.M., Christensen M., RA Cleland C.A., Copeland A., Dalin E., Dehal P., Denys M., Detter J.C., RA Escobar J., Flowers D., Fotopulos D., Garcia C., Georgescu A.M., RA Glavina T., Gomez M., Gonzales E., Groza M., Hammon N., Hawkins T., RA Haydu L., Ho I., Huang W., Israni S., Jett J., Kadner K., Kimball H., RA Kobayashi A., Larionov V., Leem S.-H., Lopez F., Lou Y., Lowry S., RA Malfatti S., Martinez D., McCready P.M., Medina C., Morgan J., RA Nelson K., Nolan M., Ovcharenko I., Pitluck S., Pollard M., RA Popkie A.P., Predki P., Quan G., Ramirez L., Rash S., Retterer J., RA Rodriguez A., Rogers S., Salamov A., Salazar A., She X., Smith D., RA Slezak T., Solovyev V., Thayer N., Tice H., Tsai M., Ustaszewska A., RA Vo N., Wagner M., Wheeler J., Wu K., Xie G., Yang J., Dubchak I., RA Furey T.S., DeJong P., Dickson M., Gordon D., Eichler E.E., RA Pennacchio L.A., Richardson P., Stubbs L., Rokhsar D.S., Myers R.M., RA Rubin E.M., Lucas S.M.; RT "The DNA sequence and biology of human chromosome 19."; RL Nature 428:529-535(2004). RN [2] {ECO:0000213|PubMed:21269460} RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. RX PubMed=21269460; DOI=10.1186/1752-0509-5-17; RA Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P., RA Burckstummer T., Bennett K.L., Superti-Furga G., Colinge J.; RT "Initial characterization of the human central proteome."; RL BMC Syst. Biol. 5:17-17(2011). RN [3] {ECO:0000313|Ensembl:ENSP00000464887} RP IDENTIFICATION. RG Ensembl; RL Submitted (NOV-2012) to UniProtKB. CC -!- CAUTION: The sequence shown here is derived from an Ensembl CC automatic analysis pipeline and should be considered as CC preliminary data. {ECO:0000313|Ensembl:ENSP00000464887}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; L47234; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR ProteinModelPortal; K7EIT8; -. DR STRING; 9606.ENSP00000375809; -. DR EPD; K7EIT8; -. DR PaxDb; K7EIT8; -. DR Ensembl; ENST00000586131; ENSP00000464887; ENSG00000104884. DR UCSC; uc060zxp.1; human. DR HGNC; HGNC:3434; ERCC2. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR GeneTree; ENSGT00550000075092; -. DR ChiTaRS; ERCC2; human. DR Proteomes; UP000005640; Chromosome 19. DR ExpressionAtlas; K7EIT8; baseline and differential. DR GO; GO:0005634; C:nucleus; IEA:InterPro. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR SMART; SM00488; DEXDc2; 1. DR SUPFAM; SSF52540; SSF52540; 2. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 1: Evidence at protein level; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000005640}; KW Proteomics identification {ECO:0000213|EPD:K7EIT8, KW ECO:0000213|MaxQB:K7EIT8, ECO:0000213|PeptideAtlas:K7EIT8}; KW Reference proteome {ECO:0000313|Proteomes:UP000005640}. FT DOMAIN 1 259 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 53 76 {ECO:0000256|SAM:Coils}. FT NON_TER 292 292 {ECO:0000313|Ensembl:ENSP00000464887}. SQ SEQUENCE 292 AA; 33440 MW; 8C52B2A489F88647 CRC64; MRELKRTLDA KGHGVLEMPS GTGKTVSLLA LIMAYQRAYP LEVTKLIYCS RTVPEIEKVI EELRKLLNFY EKQEGEKLPF LGLALSSRKN LCIHPEVTPL RFGKDVDGKC HSLTASYVRA QYQHDTSLPH CRFYEEFDAH GREVPLPAGI YNLDDLKALG RRQGWCPYFL ARYSILHANV VVYSYHYLLD PKIADLVSKE LARKAVVVFD EAHNIDNVCI DSMSVNLTRR TLDRCQGNLE TLQKTVLRIK ETDEQRLRDE YRRLVEGLRE ASAARETDAH LANPVLPDEV LQ // ID K7EKF3_HUMAN Unreviewed; 202 AA. AC K7EKF3; DT 09-JAN-2013, integrated into UniProtKB/TrEMBL. DT 09-JAN-2013, sequence version 1. DT 13-APR-2016, entry version 20. DE SubName: Full=TFIIH basal transcription factor complex helicase XPD subunit {ECO:0000313|Ensembl:ENSP00000465593}; DE Flags: Fragment; GN Name=ERCC2 {ECO:0000313|Ensembl:ENSP00000465593}; OS Homo sapiens (Human). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; OC Catarrhini; Hominidae; Homo. OX NCBI_TaxID=9606 {ECO:0000313|Ensembl:ENSP00000465593, ECO:0000313|Proteomes:UP000005640}; RN [1] {ECO:0000313|Ensembl:ENSP00000465593, ECO:0000313|Proteomes:UP000005640} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RX PubMed=15057824; DOI=10.1038/nature02399; RA Grimwood J., Gordon L.A., Olsen A.S., Terry A., Schmutz J., RA Lamerdin J.E., Hellsten U., Goodstein D., Couronne O., Tran-Gyamfi M., RA Aerts A., Altherr M., Ashworth L., Bajorek E., Black S., Branscomb E., RA Caenepeel S., Carrano A.V., Caoile C., Chan Y.M., Christensen M., RA Cleland C.A., Copeland A., Dalin E., Dehal P., Denys M., Detter J.C., RA Escobar J., Flowers D., Fotopulos D., Garcia C., Georgescu A.M., RA Glavina T., Gomez M., Gonzales E., Groza M., Hammon N., Hawkins T., RA Haydu L., Ho I., Huang W., Israni S., Jett J., Kadner K., Kimball H., RA Kobayashi A., Larionov V., Leem S.-H., Lopez F., Lou Y., Lowry S., RA Malfatti S., Martinez D., McCready P.M., Medina C., Morgan J., RA Nelson K., Nolan M., Ovcharenko I., Pitluck S., Pollard M., RA Popkie A.P., Predki P., Quan G., Ramirez L., Rash S., Retterer J., RA Rodriguez A., Rogers S., Salamov A., Salazar A., She X., Smith D., RA Slezak T., Solovyev V., Thayer N., Tice H., Tsai M., Ustaszewska A., RA Vo N., Wagner M., Wheeler J., Wu K., Xie G., Yang J., Dubchak I., RA Furey T.S., DeJong P., Dickson M., Gordon D., Eichler E.E., RA Pennacchio L.A., Richardson P., Stubbs L., Rokhsar D.S., Myers R.M., RA Rubin E.M., Lucas S.M.; RT "The DNA sequence and biology of human chromosome 19."; RL Nature 428:529-535(2004). RN [2] {ECO:0000213|PubMed:21269460} RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. RX PubMed=21269460; DOI=10.1186/1752-0509-5-17; RA Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P., RA Burckstummer T., Bennett K.L., Superti-Furga G., Colinge J.; RT "Initial characterization of the human central proteome."; RL BMC Syst. Biol. 5:17-17(2011). RN [3] {ECO:0000313|Ensembl:ENSP00000465593} RP IDENTIFICATION. RG Ensembl; RL Submitted (NOV-2012) to UniProtKB. CC -!- CAUTION: The sequence shown here is derived from an Ensembl CC automatic analysis pipeline and should be considered as CC preliminary data. {ECO:0000313|Ensembl:ENSP00000465593}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; L47234; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR ProteinModelPortal; K7EKF3; -. DR STRING; 9606.ENSP00000375809; -. DR EPD; K7EKF3; -. DR PaxDb; K7EKF3; -. DR Ensembl; ENST00000587376; ENSP00000465593; ENSG00000104884. DR UCSC; uc060zxo.1; human. DR HGNC; HGNC:3434; ERCC2. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR GeneTree; ENSGT00550000075092; -. DR ChiTaRS; ERCC2; human. DR Proteomes; UP000005640; Chromosome 19. DR ExpressionAtlas; K7EKF3; baseline and differential. DR GO; GO:0005634; C:nucleus; IEA:InterPro. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR InterPro; IPR010643; HBB. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06777; HBB; 1. DR PRINTS; PR00852; XRODRMPGMNTD. PE 1: Evidence at protein level; KW Complete proteome {ECO:0000313|Proteomes:UP000005640}; KW Proteomics identification {ECO:0000213|EPD:K7EKF3, KW ECO:0000213|MaxQB:K7EKF3, ECO:0000213|PeptideAtlas:K7EKF3}; KW Reference proteome {ECO:0000313|Proteomes:UP000005640}. FT DOMAIN 2 121 HBB. {ECO:0000259|Pfam:PF06777}. FT NON_TER 1 1 {ECO:0000313|Ensembl:ENSP00000465593}. SQ SEQUENCE 202 AA; 22660 MW; EA7C38FB5E8A6010 CRC64; XEASAARETD AHLANPVLPD EVLQEAVPGS IRTAEHFLGF LRRLLEYVKW RLRVQHVVQE SPPAFLSGLA QRVCIQRKPL RFCAERLRSL LHTLEITDLA DFSPLTLLAN FATLVSTYAK GFTIIIEPFD DRTPTIANPI LHFSCMDASL AIKPVFERFQ SVIITSGTLS PLDIYPKILD FHPVTMATFT MTLARVCLCP ML // ID K7HUU1_CAEJA Unreviewed; 74 AA. AC K7HUU1; DT 09-JAN-2013, integrated into UniProtKB/TrEMBL. DT 09-JAN-2013, sequence version 1. DT 13-APR-2016, entry version 16. DE SubName: Full=Uncharacterized protein {ECO:0000313|EnsemblMetazoa:CJA35304}; GN Name=WBGene00211151 {ECO:0000313|EnsemblMetazoa:CJA35304}; OS Caenorhabditis japonica. OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; OC Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. OX NCBI_TaxID=281687 {ECO:0000313|EnsemblMetazoa:CJA35304, ECO:0000313|Proteomes:UP000005237}; RN [1] {ECO:0000313|EnsemblMetazoa:CJA35304} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=DF5081 {ECO:0000313|EnsemblMetazoa:CJA35304}; RG Caenorhabditis japonica Sequencing Consortium; RA Wilson R.K.; RL Submitted (AUG-2010) to the EMBL/GenBank/DDBJ databases. RN [2] {ECO:0000313|EnsemblMetazoa:CJA35304} RP IDENTIFICATION. RC STRAIN=DF5081 {ECO:0000313|EnsemblMetazoa:CJA35304}; RG EnsemblMetazoa; RL Submitted (NOV-2012) to UniProtKB. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR STRING; 281687.CJA35304; -. DR EnsemblMetazoa; CJA35304; CJA35304; CJA35304. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; K7HUU1; -. DR Proteomes; UP000005237; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:InterPro. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR InterPro; IPR010643; HBB. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06777; HBB; 1. DR PRINTS; PR00852; XRODRMPGMNTD. PE 4: Predicted; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000005237}; KW Reference proteome {ECO:0000313|Proteomes:UP000005237}. FT DOMAIN 25 74 HBB. {ECO:0000259|Pfam:PF06777}. FT COILED 32 59 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 74 AA; 8471 MW; 4303F8AC1C02EF1D CRC64; MSVAISQKNA DRALDELTNL DRIIGELKKS DADKLQNEYD KLVEGLRRLE RERANDERLA NPVLPDQILQ EVVP // ID K7IS99_NASVI Unreviewed; 763 AA. AC K7IS99; DT 09-JAN-2013, integrated into UniProtKB/TrEMBL. DT 09-JAN-2013, sequence version 1. DT 11-MAY-2016, entry version 25. DE SubName: Full=Uncharacterized protein {ECO:0000313|EnsemblMetazoa:NV11946-PA}; GN Name=LOC100121723 {ECO:0000313|EnsemblMetazoa:NV11946-PA}; OS Nasonia vitripennis (Parasitic wasp). OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; OC Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; OC Chalcidoidea; Pteromalidae; Pteromalinae; Nasonia. OX NCBI_TaxID=7425 {ECO:0000313|EnsemblMetazoa:NV11946-PA, ECO:0000313|Proteomes:UP000002358}; RN [1] {ECO:0000313|EnsemblMetazoa:NV11946-PA} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=AsymCX {ECO:0000313|EnsemblMetazoa:NV11946-PA}; RX PubMed=20075255; DOI=10.1126/science.1178028; RG Nasonia Genome Working Group; RA Werren J.H., Richards S., Desjardins C.A., Niehuis O., Gadau J., RA Colbourne J.K., Werren J.H., Richards S., Desjardins C.A., Niehuis O., RA Gadau J., Colbourne J.K., Beukeboom L.W., Desplan C., Elsik C.G., RA Grimmelikhuijzen C.J., Kitts P., Lynch J.A., Murphy T., Oliveira D.C., RA Smith C.D., van de Zande L., Worley K.C., Zdobnov E.M., Aerts M., RA Albert S., Anaya V.H., Anzola J.M., Barchuk A.R., Behura S.K., RA Bera A.N., Berenbaum M.R., Bertossa R.C., Bitondi M.M., RA Bordenstein S.R., Bork P., Bornberg-Bauer E., Brunain M., RA Cazzamali G., Chaboub L., Chacko J., Chavez D., Childers C.P., RA Choi J.H., Clark M.E., Claudianos C., Clinton R.A., Cree A.G., RA Cristino A.S., Dang P.M., Darby A.C., de Graaf D.C., Devreese B., RA Dinh H.H., Edwards R., Elango N., Elhaik E., Ermolaeva O., Evans J.D., RA Foret S., Fowler G.R., Gerlach D., Gibson J.D., Gilbert D.G., RA Graur D., Grunder S., Hagen D.E., Han Y., Hauser F., Hultmark D., RA Hunter H.C. IV, Hurst G.D., Jhangian S.N., Jiang H., Johnson R.M., RA Jones A.K., Junier T., Kadowaki T., Kamping A., Kapustin Y., RA Kechavarzi B., Kim J., Kim J., Kiryutin B., Koevoets T., Kovar C.L., RA Kriventseva E.V., Kucharski R., Lee H., Lee S.L., Lees K., Lewis L.R., RA Loehlin D.W., Logsdon J.M. Jr., Lopez J.A., Lozado R.J., Maglott D., RA Maleszka R., Mayampurath A., Mazur D.J., McClure M.A., Moore A.D., RA Morgan M.B., Muller J., Munoz-Torres M.C., Muzny D.M., Nazareth L.V., RA Neupert S., Nguyen N.B., Nunes F.M., Oakeshott J.G., Okwuonu G.O., RA Pannebakker B.A., Pejaver V.R., Peng Z., Pratt S.C., Predel R., RA Pu L.L., Ranson H., Raychoudhury R., Rechtsteiner A., Reese J.T., RA Reid J.G., Riddle M., Robertson H.M., Romero-Severson J., RA Rosenberg M., Sackton T.B., Sattelle D.B., Schluns H., Schmitt T., RA Schneider M., Schuler A., Schurko A.M., Shuker D.M., Simoes Z.L., RA Sinha S., Smith Z., Solovyev V., Souvorov A., Springauf A., RA Stafflinger E., Stage D.E., Stanke M., Tanaka Y., Telschow A., RA Trent C., Vattathil S., Verhulst E.C., Viljakainen L., Wanner K.W., RA Waterhouse R.M., Whitfield J.B., Wilkes T.E., Williamson M., RA Willis J.H., Wolschin F., Wyder S., Yamada T., Yi S.V., Zecher C.N., RA Zhang L., Gibbs R.A.; RT "Functional and evolutionary insights from the genomes of three RT parasitoid Nasonia species."; RL Science 327:343-348(2010). RN [2] {ECO:0000313|EnsemblMetazoa:NV11946-PA} RP IDENTIFICATION. RG EnsemblMetazoa; RL Submitted (MAR-2014) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR STRING; 7425.NV11946-PA; -. DR EnsemblMetazoa; NV11946-RA; NV11946-PA; NV11946. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; K7IS99; -. DR OMA; DEVWKYK; -. DR PhylomeDB; K7IS99; -. DR Proteomes; UP000002358; Chromosome 3. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 2. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000002358}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000002358}. FT DOMAIN 11 287 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 260 302 {ECO:0000256|SAM:Coils}. FT COILED 742 763 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 763 AA; 87679 MW; A4709AA926ADA350 CRC64; MGIIIKFFVD GLLVYFPYDY IYPEQYAYML DLKRGLDAKG HCLLEMPSGT GKTITLLSLI VAYMLEHPHQ VTKLIYCSRT VPEIEKVIEE LKKLIDYYEK ETKVLPKIIG LVLSSRKNMC IHPEVSKERE GKIVDSQCHA LTASYVRERH NYDESTPVCG FYETFDIEGR EMMMPPGIYS IDDMKEYGKD RNWCPYFLAR YTIMHAQIIV YSYHYLLDPK IAEAVSKELA KSSVVVFDEA HNIDNVCIDS MSVKLNRRTM EKSCANLSLL EKTVAEMKED DANKLKDEYN KLVEGLKDAQ VARETDVVLA NPVLPNEVLE DVVPGNIRKA EHFVGFLKRF VEYLKMRLRI QHVVQETPVT FLRDVQAKIC IERKPLRFCA ERLASLLRTM EITDLTDFSP LILVTHLATL VATYTKGFTI IIEPFDDKAP TVHNPILYFS CLDSSIAMKP IFDRFQSVVI TSGTLSPLDM YPKILNFHPV IMSSFTMTLA RPCLLPMIVS KGNDQVAISS KYETREDVAV IRNYGQLLVE FAANVPDGIV CFFTSYLYME SVVAAWYDQG ILDQIQRYKL IFIETQDAAE TSLALYYYNK ACDNGRGAVL LSVARGKVSE GVDFDHHLGR AVLMFGIPYV YTQSRILKAR LEYLRDQFQI KENDFLTFDA MRHAAQCVGR AIRGKTDYGI MVFADKRFSR IDKKSKLPKW IQEYLTDNLC NLSTEEAIQI CKRWLRQMAQ PFSREDQLGL SLLTLEQLQN REQAKIEEQA QQN // ID K9FLG5_PEND2 Unreviewed; 794 AA. AC K9FLG5; DT 06-FEB-2013, integrated into UniProtKB/TrEMBL. DT 06-FEB-2013, sequence version 1. DT 11-MAY-2016, entry version 22. DE SubName: Full=TFIIH complex helicase Rad3, putative {ECO:0000313|EMBL:EKV10079.1}; GN ORFNames=PDIG_57700 {ECO:0000313|EMBL:EKV10079.1}; OS Penicillium digitatum (strain PHI26 / CECT 20796) (Green mold). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; OC Eurotiomycetidae; Eurotiales; Aspergillaceae; Penicillium. OX NCBI_TaxID=1170229 {ECO:0000313|EMBL:EKV10079.1, ECO:0000313|Proteomes:UP000009882}; RN [1] {ECO:0000313|Proteomes:UP000009882} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=PHI26 / CECT 20796 {ECO:0000313|Proteomes:UP000009882}; RX PubMed=23171342; DOI=10.1186/1471-2164-13-646; RA Marcet-Houben M., Ballester A.-R., de la Fuente B., Harries E., RA Marcos J.F., Gonzalez-Candelas L., Gabaldon T.; RT "Genome sequence of the necrotrophic fungus Penicillium digitatum, the RT main postharvest pathogen of citrus."; RL BMC Genomics 13:646-646(2012). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:EKV10079.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AKCT01000232; EKV10079.1; -; Genomic_DNA. DR EnsemblFungi; EKV10079; EKV10079; PDIG_57700. DR InParanoid; K9FLG5; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000009882; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EKV10079.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000009882}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EKV10079.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EKV10079.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EKV10079.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000009882}. FT DOMAIN 7 282 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 248 297 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 794 AA; 90737 MW; 72A4A8B1C2D42B49 CRC64; MKFFIDDLPV LFPYPRIYPE QYAYMCDLKK TLDAGGHCVL EMPSGTGKTV SLLSLIVAYQ QHYPEHRKLI YCSRTMSEIE KALAELKALM EHRAKELGHE EEFRALGLTS RKNLCLHPSV KREKSGTVVD ARCRSLTAGF VKEKKERGED VELCVYHENL DLLEPHNLVP PGVFTLDGLA RYGEEHKQCP YFSARRMMPW CNIIIYSYHY LLDPKIAERV SRELSKDCIV VFDEAHNIDN VCIESLSIDL SEDSLRKATR GANNLERRIE EMKSTDEEKL KNEYSKLVEG LQEAEKAREE DQFISNPVLP DDLLKEAVPG NIRRAEHFVS FLKRFIEYLK TRMKVTHTIS ETPPSFLTHL KDLTYIERKP LRFCAERLTS LVRTLELVNI EDYQPLQEVA TFATLVATYD KGFVLILEPF ESEAATVPNP ILHFTCLDAA IAIKPVFDRF SSVIITSGTL SPLEMYPKML GFTAVLQESY SMTLARRSFL PMIVTRGSDQ AQVSSSFGIR NDPGVVRNYG SLVTEFARIT PDGVVVFFPS YLYMESIISM WQGMGILDQI WNYKLILVET PDAQESSLAL ETYRTACCNG RGAILFCVAR GKVSEGIDFD HHYGRAVLCI GVPFQYTESR ILKARLEFLR ENYRIRENDF LSFDAIRHAA QCLGRVLRGK DDYGVMVLAD RRFERKRPQL PKWINQAMLD SETNLSTDMA VSNAKNFLRT MAQPFKSKDQ EGISTWGLAD IERHEAKRRT EEERMMREVN DGHPIGGIIP SASLVVEDEY DDNIDADLMM LDAP // ID L0F6M1_DESDL Unreviewed; 773 AA. AC L0F6M1; DT 06-MAR-2013, integrated into UniProtKB/TrEMBL. DT 06-MAR-2013, sequence version 1. DT 11-MAY-2016, entry version 19. DE SubName: Full=DNA helicase, Rad3 {ECO:0000313|EMBL:AGA69479.1}; GN OrderedLocusNames=Desdi_2034 {ECO:0000313|EMBL:AGA69479.1}; OS Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1). OC Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; OC Desulfitobacterium. OX NCBI_TaxID=871963 {ECO:0000313|EMBL:AGA69479.1, ECO:0000313|Proteomes:UP000010797}; RN [1] {ECO:0000313|Proteomes:UP000010797} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=LMG P-21439 / DCA1 {ECO:0000313|Proteomes:UP000010797}; RA Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., RA Peters L., Ovchinnikova G., Teshima H., Detter J.C., Han C., Tapia R., RA Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Kruse T., RA de Vos W.M., Boon N., Smidt H., Woyke T.; RT "Complete sequence of Desulfitobacterium dichloroeliminans LMG P- RT 21439."; RL Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP003344; AGA69479.1; -; Genomic_DNA. DR RefSeq; WP_015262460.1; NC_019903.1. DR EnsemblBacteria; AGA69479; AGA69479; Desdi_2034. DR KEGG; ddl:Desdi_2034; -. DR OMA; DYNYYFD; -. DR Proteomes; UP000010797; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 4. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000313|EMBL:AGA69479.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000010797}; KW Helicase {ECO:0000313|EMBL:AGA69479.1}; KW Hydrolase {ECO:0000313|EMBL:AGA69479.1}; KW Nucleotide-binding {ECO:0000313|EMBL:AGA69479.1}; KW Reference proteome {ECO:0000313|Proteomes:UP000010797}. FT DOMAIN 181 435 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 773 AA; 89307 MW; DCE25029CEB50FA0 CRC64; MDKKQRVSVR TLVEFVLRQG DLQTGFRSAT RLIEGTRAHQ ILQKQRGEDY QPEVALHTIY HQDELTLEIH GRADGIFRSE SGVVVEEIKS TSLELDLIDQ SYSILHWAQA QCYAYILASQ EELAQIQVQL TYIHLETHET KEFMKIFSCE ELENFFTDLV ERYCAWANRL SAWVQLRNGS IAQLEFPYPS YRKGQRELVV AVYKTIKEGN RLYVQAPTGI GKTLGTIFPA LKALLEGEEA PVFYLTAKTI TRTVAESSLL MLEHQGLSLK RLTLTAKDKI CFNPGCDCNP EDCSFAKGYY DRLGLGLADI FQVDVWNREQ IERCGRLHAI CPFEFSLELS NWADLVICDY NYVFDPRVFL KRFFLEGGAY TFLIDEAHNL VDRAQEMFSA ELNKEELQHV KNLVQEEEPV LGKRLQTVNR NLLKLKKQGL EVAKDAPTSL YSSLERVVNE VEKIFKKEEN SPWKEKLTEL YFSIQAFLRT AESFDEHYLT YYQSTEEDYR VKLFCVDPAK RLSEVLNKGR AAIFFSATLS PLEYFIKILG GEKTSYKLHL ASPFPPQNLC VMIQKQISTK YKQRSLSLDS VVEAIISLVR GRIGNYLVYF PSYEYLERVR ERLMMLHPDL KLLPQTFGMA EENREEFLEA FQADPQESLV ALALLGGVFG EGIDLTGTRL SGAIIVSVGL PQLGLERDII RNYFQECYRQ GFEYAYMYPG MNKVLQACGR VIRTEQDRGV ILLIDERFAR LGYKQLFPKE WKDVHYLQDN GQIQPILERF WRL // ID L0HIP5_METFS Unreviewed; 669 AA. AC L0HIP5; DT 06-MAR-2013, integrated into UniProtKB/TrEMBL. DT 06-MAR-2013, sequence version 1. DT 11-MAY-2016, entry version 21. DE SubName: Full=DNA helicase, Rad3 {ECO:0000313|EMBL:AGB03163.1}; GN OrderedLocusNames=Metfor_2157 {ECO:0000313|EMBL:AGB03163.1}; OS Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP). OC Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; OC Methanoregulaceae; Methanoregula. OX NCBI_TaxID=593750 {ECO:0000313|EMBL:AGB03163.1, ECO:0000313|Proteomes:UP000010824}; RN [1] {ECO:0000313|Proteomes:UP000010824} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=DSM 22288 / NBRC 105244 / SMSP RC {ECO:0000313|Proteomes:UP000010824}; RA Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., RA Peters L., Ovchinnikova G., Teshima H., Detter J.C., Han C., Tapia R., RA Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Imachi H., RA Tamaki H., Sekiguchi Y., Kamagata Y., Cadillo-Quiroz H., Zinder S., RA Liu W.-T., Woyke T.; RT "Complete sequence of Methanoregula formicicum SMSP."; RL Submitted (DEC-2011) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP003167; AGB03163.1; -; Genomic_DNA. DR RefSeq; WP_015286126.1; NC_019943.1. DR EnsemblBacteria; AGB03163; AGB03163; Metfor_2157. DR GeneID; 14309549; -. DR KEGG; mfo:Metfor_2157; -. DR KO; K10844; -. DR OMA; EYCPFYA; -. DR Proteomes; UP000010824; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 2. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000313|EMBL:AGB03163.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000010824}; KW Helicase {ECO:0000313|EMBL:AGB03163.1}; KW Hydrolase {ECO:0000313|EMBL:AGB03163.1}; KW Nucleotide-binding {ECO:0000313|EMBL:AGB03163.1}; KW Reference proteome {ECO:0000313|Proteomes:UP000010824}. FT DOMAIN 2 307 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 669 AA; 75339 MW; 2D6DB0A9F58910F4 CRC64; MNSIDTFFPY SEYRPGQRHM LEVAATVARD GGIAMIDAPT GSGKSSVVAS LLAERKGRKV VIAVRTVSQL TTFIRELELV KKKAPQIKTV YLVGKKSMCP LGGEGDVYRR CEGVKAFSTS LMRDRAEKGA MIPAKDPFII QQIRRMDREH PLLCPYYINS KMFVPAEGVG VRMVPSTELR NKADRVIQNP VPPRDLTEYS SGLCPYELMM HAAKNTNVVI LNYHHLFDRQ IREQLYANLG VEEQDILLLI DEAHNCGDVI TGIESVTMEE RDLEQASREL SGMARRHKGA EAVRHVLPRL TEFIRGLQNS VEAEDWFDPA IFDRMIVRES LYKDMDEIVD DLMGLSETIR EKNQKSGEFR ETAIERLTEF LLRLSNSATD PAFLTVYRKE ESGITLEVRS IDPAASLSEV CGSHACAILI SGTLSPVESF RKYYFGNGNV TTLSLPNAFP KENRLIVCAN DITTAYSMRQ NKENTNRIAG YIRSFSSLKG NRAIYFPSYQ ILETYADLTA RDIRGKKVFI EPRDAAGAGA ALTEFLSLPS RRESGVMFAV AGGKWSEGLD YRGEMMAGAM VIGLPLAPFN RVRKMMIEYY RHKFGPEGEF LCYTLPAVNR SLQALGRVLR TPEDRGVLVL GEKRFLEKKV KDALPAWIQE EMIACDCDRF REVLAQWKP // ID L0PD55_PNEJ8 Unreviewed; 774 AA. AC L0PD55; DT 06-MAR-2013, integrated into UniProtKB/TrEMBL. DT 06-MAR-2013, sequence version 1. DT 11-MAY-2016, entry version 23. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CCJ29560.1}; GN ORFNames=PNEJI1_002025 {ECO:0000313|EMBL:CCJ29560.1}; OS Pneumocystis jiroveci (strain SE8) (Pneumocystis pneumonia agent). OC Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; OC Pneumocystidomycetes; Pneumocystidaceae; Pneumocystis. OX NCBI_TaxID=1209962 {ECO:0000313|Proteomes:UP000010422}; RN [1] {ECO:0000313|EMBL:CCJ29560.1, ECO:0000313|Proteomes:UP000010422} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=SE8 {ECO:0000313|EMBL:CCJ29560.1, RC ECO:0000313|Proteomes:UP000010422}; RX PubMed=23269827; DOI=10.1128/mBio.00428-12; RA Cisse O.H., Pagni M., Hauser P.M.; RT "De novo assembly of the Pneumocystis jirovecii genome from a single RT bronchoalveolar lavage fluid specimen from a patient."; RL MBio 3:E428-E428(2012). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:CCJ29560.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CAKM01000196; CCJ29560.1; -; Genomic_DNA. DR InParanoid; L0PD55; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000010422; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000010422}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000010422}. FT DOMAIN 7 289 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 255 297 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 774 AA; 89645 MW; 5C6C74033CB68C47 CRC64; MKFFIDDLPV LFPYPRIYPE QYAYMCHLKK TLDAGGHCVL EMPSGTGKTV SLLSLIISYQ KVFEQHRKLV YCSRTMSEIE KILVELKNLI EFRKKISEEN SKFRALGLTS RKNLCLHPSI KHEKKGNIVD ARCRGLTASF VREKKKAGEK VNLCLYYENL NFLDFCDLIP YGVFTFTDLI EYGEKNQQCP YFIARRMIPF CNVVVYSYHY LLDPKISEFI SRELSKDCIV VFDEAHNIDN VCIESLSVDI TEDSLKRASH SINSLETKIA NMKKNNAEKL QMEYRKLVEG LREIEKIKEN DIFITNSILS DDLLKEAIPG NIRKAEHFVA FLKRFVEYMK TRMKVLHVIA ETPLSFLQHL KELTYIESKP LRFCAERLNS LIRTLELSDI EDYQYLQEIT DFATLVSTYE KGFIIILEPF ETDTATVPNP VFHFTCLDAS IAIKPIFAKF KSVIITSGTI SPLDMYPKIL QFNAVIQESY NISLARNSFL PMIITRGSNQ VAISSKFEVR DDPSVVRNYG DILLEFSKIT PDGLVAFFPS YIYMESINEI WKYKLILVET PDSQETVLAL KTYRTACDNG RGAILLCVAR GKISEGIDFD HHYGRTVIMF GIPYQYTKSR ILKARLEFLR DMYHIKENDF LTFDAMRHAA QCLGRVLRGK DDYGIMVLAD RRFSRTDKRN KLPKWIQQYI TSGTSNLSTD MSIAFAEKFL KAMAQPFNIK DQEGISWWDI EKLHEYQKKE KQTESKNNED LIDANENEYD VSDEILEISD DIKS // ID L2GQA7_VITCO Unreviewed; 747 AA. AC L2GQA7; DT 06-MAR-2013, integrated into UniProtKB/TrEMBL. DT 06-MAR-2013, sequence version 1. DT 11-MAY-2016, entry version 19. DE SubName: Full=DNA repair helicase (Rad3) {ECO:0000313|EMBL:ELA42799.1}; GN ORFNames=VICG_00114 {ECO:0000313|EMBL:ELA42799.1}; OS Vittaforma corneae (strain ATCC 50505) (Microsporidian parasite) OS (Nosema corneum). OC Eukaryota; Fungi; Microsporidia; Nosematidae; Vittaforma. OX NCBI_TaxID=993615 {ECO:0000313|EMBL:ELA42799.1, ECO:0000313|Proteomes:UP000011082}; RN [1] {ECO:0000313|Proteomes:UP000011082} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 50505 {ECO:0000313|Proteomes:UP000011082}; RG The Broad Institute Genome Sequencing Platform; RA Cuomo C., Didier E., Bowers L., Young S.K., Zeng Q., Gargeya S., RA Fitzgerald M., Haas B., Abouelleil A., Alvarado L., Arachchi H.M., RA Berlin A., Chapman S.B., Gearin G., Goldberg J., Griggs A., Gujja S., RA Hansen M., Heiman D., Howarth C., Larimer J., Lui A., RA MacDonald P.J.P., McCowen C., Montmayeur A., Murphy C., Neiman D., RA Pearson M., Priest M., Roberts A., Saif S., Shea T., Sisk P., RA Stolte C., Sykes S., Wortman J., Nusbaum C., Birren B.; RT "The genome sequence of Vittaforma corneae strain ATCC 50505."; RL Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; JH370130; ELA42799.1; -; Genomic_DNA. DR RefSeq; XP_007603567.1; XM_007603505.1. DR EnsemblFungi; ELA42799; ELA42799; VICG_00114. DR GeneID; 19880832; -. DR InParanoid; L2GQA7; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000011082; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:ELA42799.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000011082}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:ELA42799.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:ELA42799.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:ELA42799.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000011082}. FT DOMAIN 7 267 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 747 AA; 85331 MW; 53EDC3859AD9ADB5 CRC64; MRFLIDGVPI YFPYEKIYPE QLKYIKSLLK SIQTPGHVLI EMPSGTGKTV ALLSCTVSYQ LHMKAKGVPF KIVYCSRTLP EIDKALKELR SLVEYIKKHV SFDFLGVGLS KRGNMCINKE ALGSFDVEIT CRKMTNHFEN MKCDFYENKA TSIPYGVYDF TEIKELGAKM GVCPYFFVRN HLPLFDCIIY PYNYLIEPSI FSIISKELPK DSFVVFDEAH NIDSHCIEAL SIEISRNTLE AASRIMSVIE SKIKSKKQEI DRRLRKEYEL MFKTMEYTGE NTIPHFFNTN KPELAPGNLR NASHFVSVMK RLIEFLKTKL KTTHLTVESI KSFIQSIKEL TFIDKKTLSF VSQRMGIMVQ SLGVEDDELY KLLSIANFGT MLSIYSKGFS VIFEPYDTMS GVFNPVLRLS CLDASIAMSH VFKNFRNVII TSGTLSPIEM YPKILNFVPS SIVEIGITLC RNSTSPLIIT KGDDQMLLKN SKDDEYEMLE MQKSSMSQAD GKITTSFALR ADPSVVRNYG NLITSLSKIV PDNIVVFFPS YIYMEEVITL WSESNVMEEI LQSKLVFIET PDFRETETAL RNYRKACDMG RGAVLFSVAR GKVSEGVDFE HGYGRAVVML GVPFMYTESV RLKERLKYMR QEHGIKEYEF LVFDAMRHAA QCLGRVLRNK TDYGLMIMAD QRFGAQSKIS KMPKWIQERI EKGNCGLSID MALSIAKMFY KEMAQPVSGD GVALLDEKDI DVYLKKM // ID L5KMH6_PTEAL Unreviewed; 736 AA. AC L5KMH6; DT 06-MAR-2013, integrated into UniProtKB/TrEMBL. DT 06-MAR-2013, sequence version 1. DT 11-MAY-2016, entry version 22. DE SubName: Full=TFIIH basal transcription factor complex helicase subunit {ECO:0000313|EMBL:ELK12750.1}; GN ORFNames=PAL_GLEAN10004022 {ECO:0000313|EMBL:ELK12750.1}; OS Pteropus alecto (Black flying fox). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Mammalia; Eutheria; Laurasiatheria; Chiroptera; Megachiroptera; OC Pteropodidae; Pteropodinae; Pteropus. OX NCBI_TaxID=9402 {ECO:0000313|EMBL:ELK12750.1, ECO:0000313|Proteomes:UP000010552}; RN [1] {ECO:0000313|Proteomes:UP000010552} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RX PubMed=23258410; DOI=10.1126/science.1230835; RA Zhang G., Cowled C., Shi Z., Huang Z., Bishop-Lilly K.A., Fang X., RA Wynne J.W., Xiong Z., Baker M.L., Zhao W., Tachedjian M., Zhu Y., RA Zhou P., Jiang X., Ng J., Yang L., Wu L., Xiao J., Feng Y., Chen Y., RA Sun X., Zhang Y., Marsh G.A., Crameri G., Broder C.C., Frey K.G., RA Wang L.F., Wang J.; RT "Comparative analysis of bat genomes provides insight into the RT evolution of flight and immunity."; RL Science 339:456-460(2013). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; KB030659; ELK12750.1; -; Genomic_DNA. DR InParanoid; L5KMH6; -. DR Proteomes; UP000010552; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:ELK12750.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000010552}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:ELK12750.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:ELK12750.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:ELK12750.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000010552}. FT DOMAIN 1 259 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 736 AA; 84060 MW; 11C34D7212976110 CRC64; MLELKRTLDA KGHGILEMPS GTGKTVSLLA LIMAYQRAYP LEVTKLIYCS RTVPEIEKVI EELRKLLSFY EKQEGEKLQF LGLALSSRKN LCIHPEVTPL RFGKDVDGKC HSLTASYVRA QYQQDHSLPH CRFYEEFDIH GRQVPLPAGI YNLDDLKAMG RRQGWCPYFL ARYSILHANV VVYSYHYLLD PKIADLVSKE LARKAVVVFD EAHNIDNVCI DSMSVNLTRR TLDRCQGNLE TLQKTVLRIK ETDEQRLRDE YRRLVEGLRE ASAARETDAH LANPVLPDEV LQEAVPGSIR TAEHFLGFLR RLLEYVKWRL RAQHMVQESP PAFLSGLAQR VCIQRKPLRF CAERLRSLLH TLEIADLADF SPLTLLANFA TLVSTYAKGF TIIIEPFDDR TPTITNPILH FSCMDASLAI KPVFERFQSV IITSGTLSPL DIYPKILDFH PVTMATFTMT LARVCLCPMI IGRGNDQVTI TSKFETREDI AVIRNYGNLL LEMSAVVPDG IVAFFTSYQY MESTVASWYE QGILENIQRN KLLFIETQDG AETSVALEKY QEACENGRGA ILLSVARGKV SEGIDFVHHF GRAVIMFGVP YVYTQSRILK ARLEYLRDQF QIREKDFLTF DAMRHAAQCV GRAIRGKTDY GLMVFADKRF TSADKRGKLP RWIQEHLSDS NLNLTVDEGV QVAKYFLRQM AQPFHREDQL GLSLLSLEQL QSEETLRRIE QIAQQL // ID L5M425_MYODS Unreviewed; 600 AA. AC L5M425; DT 06-MAR-2013, integrated into UniProtKB/TrEMBL. DT 06-MAR-2013, sequence version 1. DT 11-MAY-2016, entry version 20. DE SubName: Full=TFIIH basal transcription factor complex helicase XPD subunit {ECO:0000313|EMBL:ELK33414.1}; DE Flags: Fragment; GN ORFNames=MDA_GLEAN10005789 {ECO:0000313|EMBL:ELK33414.1}; OS Myotis davidii (David's myotis). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Mammalia; Eutheria; Laurasiatheria; Chiroptera; Microchiroptera; OC Vespertilionidae; Myotis. OX NCBI_TaxID=225400 {ECO:0000313|EMBL:ELK33414.1, ECO:0000313|Proteomes:UP000010556}; RN [1] {ECO:0000313|Proteomes:UP000010556} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RX PubMed=23258410; DOI=10.1126/science.1230835; RA Zhang G., Cowled C., Shi Z., Huang Z., Bishop-Lilly K.A., Fang X., RA Wynne J.W., Xiong Z., Baker M.L., Zhao W., Tachedjian M., Zhu Y., RA Zhou P., Jiang X., Ng J., Yang L., Wu L., Xiao J., Feng Y., Chen Y., RA Sun X., Zhang Y., Marsh G.A., Crameri G., Broder C.C., Frey K.G., RA Wang L.F., Wang J.; RT "Comparative analysis of bat genomes provides insight into the RT evolution of flight and immunity."; RL Science 339:456-460(2013). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; KB104360; ELK33414.1; -; Genomic_DNA. DR Proteomes; UP000010556; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:ELK33414.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000010556}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:ELK33414.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:ELK33414.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:ELK33414.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000010556}. FT DOMAIN 7 224 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT NON_TER 1 1 {ECO:0000313|EMBL:ELK33414.1}. SQ SEQUENCE 600 AA; 68308 MW; 18ECFD1FDDD0864F CRC64; ARLNVDGLLV YFPYDYIYPE QFSYMLELKR TLDAKGHGVL EMPSGTGKTV SLLALIMAYQ RVTPLRFGKD VDGKCHSLTA SYVRAQYQRD PSLPHCRFYE EFDIHGRQVP LPAGIYNLDD LKAVGRRQGW CPYFLARYSI LHANVVVYSY HYLLDPKIAD LVSKELARKA VVVFDEAHNI DNVCIDSMSV NLTRRTLDRC QGNLETLQKT VLRFCAERLR SLLHTLEIAD LADFSPLTLL ANFATLVSTY AKGFTIIIEP FDDRTPTITN PILHFSCMDA SLAIKPVFER FQSVIITSGT LSPLDIYPKI LDFHPVTMAT FTMTLARVCL CPMIIGRGND QVAISSKFET REDIAVIRNY GNLLLEMSAV VPDGIVAFFT SYQYMESTVA SWYEQGILEN IQRNKLLFIE TQDGAETSVA LEKYQEACEN GRGAILLSVA RGKVSEGIDF VHHFGRAVIM FGVPYVYTQS RILKARLEYL RDQFQIREND FLTFDAMRHA AQCVGRAIRG KTDYGLMVFA DKRFARADKR GKLPRWIQEH LTDANLNLTV DEGVQVAKYF LRQMAQPFHR EDQLGLSLLS LEQLESEETL RRIEQIAQQL // ID L7VN18_CLOSH Unreviewed; 793 AA. AC L7VN18; DT 03-APR-2013, integrated into UniProtKB/TrEMBL. DT 03-APR-2013, sequence version 1. DT 11-MAY-2016, entry version 24. DE SubName: Full=ATP-dependent DNA helicase {ECO:0000313|EMBL:AGC68064.1}; DE EC=3.6.4.12 {ECO:0000313|EMBL:AGC68064.1}; GN OrderedLocusNames=Cst_c10660 {ECO:0000313|EMBL:AGC68064.1}; OS Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM OS 8532 / NCIMB 11754). OC Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; OC Ruminiclostridium. OX NCBI_TaxID=1121335 {ECO:0000313|EMBL:AGC68064.1, ECO:0000313|Proteomes:UP000011220}; RN [1] {ECO:0000313|EMBL:AGC68064.1, ECO:0000313|Proteomes:UP000011220} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 35414 / DSM 8532 / NCIMB 11754 RC {ECO:0000313|Proteomes:UP000011220}; RX PubMed=23516204; DOI=10.1128/genomeA.00073-13; RA Poehlein A., Zverlov V.V., Daniel R., Schwarz W.H., Liebl W.; RT "Complete genome sequence of Clostridium stercorarium subsp. RT stercorarium strain DSM 8532, a thermophilic degrader of plant cell RT wall fibers."; RL Genome Announc. 1:E0007313-E0007313(2013). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP004044; AGC68064.1; -; Genomic_DNA. DR RefSeq; WP_015358754.1; NC_020887.2. DR EnsemblBacteria; AGC68064; AGC68064; Cst_c10660. DR KEGG; csd:Clst_1019; -. DR KEGG; css:Cst_c10660; -. DR Proteomes; UP000011220; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 4. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR001650; Helicase_C. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. DR PROSITE; PS51194; HELICASE_CTER; 1. PE 4: Predicted; KW ATP-binding {ECO:0000313|EMBL:AGC68064.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000011220}; KW Helicase {ECO:0000313|EMBL:AGC68064.1}; KW Hydrolase {ECO:0000313|EMBL:AGC68064.1}; KW Nucleotide-binding {ECO:0000313|EMBL:AGC68064.1}; KW Reference proteome {ECO:0000313|Proteomes:UP000011220}. FT DOMAIN 185 437 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT DOMAIN 598 786 Helicase C-terminal. FT {ECO:0000259|PROSITE:PS51194}. SQ SEQUENCE 793 AA; 91024 MW; EA85EADA9A9B90BB CRC64; MEPVKINVSV RELVSYSIPG EEHFFSFVSA KEGIEGHMFI HGLLKQRTEP FGIYRQEIPV STTFAHDIFL LQISGRLDGL IERNGNFTLC EIKTTDKPLD TLDESDNPAH WAQGRCYAYI VAKEKGLDKI GVMLLYLHRQ SREIRVFEET LTFGELERFF NSLVFPFIYG LKKRYDWQHL RNVSIKELTF PFPDFRKGQR IMSGAVYRAI RDGKKQFIQA PTGIGKTIGA LFPAIKAMGE GHVDKIFYLT ARNTTQAEAL KAYKMLAEKG LRLKTLQITA KEKVCFMPGK QCVEEECPYI FEYMQRSRSV VSNAVSRTDL FSREFIELTA KENGLCPFEL SLDLSTQADL IICDYNYVFD PRVYLRRFFQ DKTDENICLL IDEAHNLPER AREMFSAELK RSMVRIVYHK LKNTLPYLAN SLKKVRKALL SYAAKVSPVS GKKPYPQVTS DSEPPKELTA PIDNFIYLAE GVLNDETPYP FKEELAALFF EMVHFSRIFD LYGENYATIY SREKGDFSVK LFCVDPAPML KKRTENSKSS IFFSATLSPP SYFREILGGN EGDGFIILPS PFPRENLYLY VDNTVSTRFR HRAGALSSIV ERIHECVSVK TGNYMVFFPS FEYMQKAAAE YMNRFPGDRI LIQEQDMDEN RRAEFLASFS EYGKETLIAF VVMGGIFSEG IDLKGECLSG VIIVGVGLPQ VCEERDIIKK YYQKKNGKGF EFAYTYPGLN KVQQAAGRVI RSEHDRGFVV LIDDRFTTPL YLKIMPREWF PLKTSDNGTD LIGELKKFWK CMA // ID L8G1H6_PSED2 Unreviewed; 795 AA. AC L8G1H6; DT 03-APR-2013, integrated into UniProtKB/TrEMBL. DT 03-APR-2013, sequence version 1. DT 11-MAY-2016, entry version 22. DE SubName: Full=DNA repair helicase rad15 {ECO:0000313|EMBL:ELR05816.1}; GN ORFNames=GMDG_01893 {ECO:0000313|EMBL:ELR05816.1}; OS Pseudogymnoascus destructans (strain ATCC MYA-4855 / 20631-21) (Bat OS white-nose syndrome fungus) (Geomyces destructans). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; OC Leotiomycetes incertae sedis; Pseudeurotiaceae; Pseudogymnoascus. OX NCBI_TaxID=658429 {ECO:0000313|EMBL:ELR05816.1, ECO:0000313|Proteomes:UP000011064}; RN [1] {ECO:0000313|Proteomes:UP000011064} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC MYA-4855 / 20631-21 {ECO:0000313|Proteomes:UP000011064}; RG The Broad Institute Genome Sequencing Platform; RA Cuomo C.A., Blehert D.S., Lorch J.M., Young S.K., Zeng Q., Gargeya S., RA Fitzgerald M., Haas B., Abouelleil A., Alvarado L., Arachchi H.M., RA Berlin A., Brown A., Chapman S.B., Chen Z., Dunbar C., Freedman E., RA Gearin G., Gellesch M., Goldberg J., Griggs A., Gujja S., Heiman D., RA Howarth C., Larson L., Lui A., MacDonald P.J.P., Montmayeur A., RA Murphy C., Neiman D., Pearson M., Priest M., Roberts A., Saif S., RA Shea T., Shenoy N., Sisk P., Stolte C., Sykes S., Wortman J., RA Nusbaum C., Birren B.; RT "The genome sequence of Geomyces destructans 20631-21."; RL Submitted (SEP-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GL573192; ELR05816.1; -; Genomic_DNA. DR RefSeq; XP_012740295.1; XM_012884841.1. DR EnsemblFungi; ELR05816; ELR05816; GMDG_01893. DR GeneID; 24482772; -. DR InParanoid; L8G1H6; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000011064; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:ELR05816.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000011064}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:ELR05816.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:ELR05816.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:ELR05816.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000011064}. FT DOMAIN 7 284 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 277 300 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 795 AA; 91090 MW; C5050791C075DCFF CRC64; MKFNIDDLPV LFPYPRIYPE QYAYMCDLKR TLDAGGHCVL EMPSGTGKTV SLLSLIVAYQ QYYPEHRKLI YCSRTMSEIE KALAELKALM NYRTEQLGRV EEFRGLGLTS RKNLCLHPSV KREKSGAIVD ARCRSLTAGF VKDKKENGED VELCTYHENL DLLEPHDLIP NGVWTLDGIM RYGEEHKQCP YFTSRRMMPF CNVIIYSYHY LLDPKIAERV SKELSKDCIV VFDEAHNIDN VCIESLSTDI TEDSLRKATR GAQNLETKIC EIKDTDAEKL QNEYAKLVEG LREADEAREE DTFMSNPALP DDLLKEAVPG NIRRAEHFVA FLKRFVEYLK TRMRVRQVIS ETPLSFLAHL KETTFIERKP LRFCAERLTS LVRTLELTNI EDYQPLQQVA TFATLVATYE KGFLLILEPY ESDTAEVPNP VLHFTCLDAA IAIKPVFDRF SSVIITSGTL SPLEMYPKML NFTTVVQETY QMTLARRSFL PMIVTRGSDQ VAISSGFQVR NEPSVVRNYG NLLTEFSKIT PDGMVVFFPS YLYMESIISM WQGMGILDEV WKYKLILVET PDAQETSLAL ETYRTACCNG RGAILLCVAR GKVSEGIDFD HQYGRTVLCI GVPFQYTESR ILKARLEFLR ETYRIRENDF LSFDAMRHAS QCLGRVLRGK DDYGIMVLAD RRFMKKRAQL PSWINNAVMD SDTNLSIDMA VSSAKKFLKN IAQPFKQEDH EGISTWSVTD LRKHQEKEDE EKIRELQGGA TLENLRHGNE QDVIMGDEYG MDDEEFEAGM MELDG // ID L8XA27_THACA Unreviewed; 675 AA. AC L8XA27; DT 03-APR-2013, integrated into UniProtKB/TrEMBL. DT 03-APR-2013, sequence version 1. DT 11-MAY-2016, entry version 19. DE SubName: Full=DNA repair helicase RAD3 {ECO:0000313|EMBL:ELU45534.1}; GN ORFNames=AG1IA_00412 {ECO:0000313|EMBL:ELU45534.1}; OS Thanatephorus cucumeris (strain AG1-IA) (Rice sheath blight fungus) OS (Rhizoctonia solani). OC Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; OC Agaricomycetes; Cantharellales; Ceratobasidiaceae; OC mitosporic Ceratobasidiaceae; Rhizoctonia. OX NCBI_TaxID=983506 {ECO:0000313|EMBL:ELU45534.1, ECO:0000313|Proteomes:UP000011668}; RN [1] {ECO:0000313|EMBL:ELU45534.1, ECO:0000313|Proteomes:UP000011668} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=AG-1 IA {ECO:0000313|Proteomes:UP000011668}; RX PubMed=23361014; DOI=10.1038/ncomms2427; RA Zheng A., Lin R., Xu L., Qin P., Tang C., Ai P., Zhang D., Liu Y., RA Sun Z., Feng H., Wang Y., Chen Y., Liang X., Fu R., Li Q., Zhang J., RA Yu X., Xie Z., Ding L., Guan P., Tang J., Liang Y., Wang S., Deng Q., RA Li S., Zhu J., Wang L., Liu H., Li P.; RT "The evolution and pathogenic mechanisms of the rice sheath blight RT pathogen."; RL Nat. Commun. 4:1424-1424(2013). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:ELU45534.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AFRT01000065; ELU45534.1; -; Genomic_DNA. DR EnsemblFungi; ELU45534; ELU45534; AG1IA_00412. DR Proteomes; UP000011668; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:InterPro. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 1. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:ELU45534.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000011668}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:ELU45534.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:ELU45534.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:ELU45534.1}; KW Reference proteome {ECO:0000313|Proteomes:UP000011668}. FT DOMAIN 1 305 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 200 223 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 675 AA; 76725 MW; 029E434455CCD55F CRC64; MCDLKRTLDA TGHCVLEMPS GTGKTVSLLS LIVSYQQFYP TKRKLIYCSR TVPEIEKALS ELKRLMAYRI SQAETPEQRI KEEAFTGLGL TSRKNLCLNP EVSKEKKGKV VDARCRDLTS SQAVEKGRND PGNHPLCAWH EGLNDMEEGA LIPAGIHTLA DISNMGRERT TCPYFTIRRM KLRRAVLHDL AKKLTSLIKA TDANRLQEEY EKLVEGLQET ENDRAEDVVM ANPGVLIVWG LRYTLIGVRK SFLMIFLRKQ FQTRMRVLHV VAETPLSFLQ HLKDITYIER RPLRRVFCAE RLQSLIRTLE LTQIDEYSSL QKVANFATLV STYEKGKHIQ AALELRSSVN LGFLLILEPF EGENTTVPNP IFHFTCLDPS LAIKPVFERF SSVVITSETY PMTLTRNCFL PLVITRGSDQ VAISSRFEVR NDPSVVRNFG SILIEYCKIV PDGVVAFFPS YLYMESIVAA WHDMACDNGR GAVLLSVARG KVSEGIDFDH NYGRAVIMFG IPYQYTESRI LKARLEYLRD AYRIRESEFL GFDAMRNAAQ CVGRVLRGKT DWGLMIFADK RFARADKRSK LPRWINQYIT ESASNLSTDM ALVQSKLFMR TISQSHDVEQ TGVSLWTKED IEAHQAKLRA MDPADVEMNE DKDEEDEYEG GISDAVLANV DLDDM // ID L9L7M3_TUPCH Unreviewed; 732 AA. AC L9L7M3; DT 03-APR-2013, integrated into UniProtKB/TrEMBL. DT 03-APR-2013, sequence version 1. DT 11-MAY-2016, entry version 21. DE SubName: Full=TFIIH basal transcription factor complex helicase XPD subunit {ECO:0000313|EMBL:ELW71110.1}; GN ORFNames=TREES_T100011440 {ECO:0000313|EMBL:ELW71110.1}; OS Tupaia chinensis (Chinese tree shrew). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Mammalia; Eutheria; Euarchontoglires; Scandentia; Tupaiidae; Tupaia. OX NCBI_TaxID=246437 {ECO:0000313|EMBL:ELW71110.1, ECO:0000313|Proteomes:UP000011518}; RN [1] {ECO:0000313|Proteomes:UP000011518} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RA Zhang G., Fan Y., Yao Y., Huang Z.; RT "Genome of the Chinese tree shrew, a rising model animal genetically RT related to primates."; RL Submitted (JUL-2012) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; KB320473; ELW71110.1; -; Genomic_DNA. DR InParanoid; L9L7M3; -. DR Proteomes; UP000011518; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 2. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 2. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:ELW71110.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000011518}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:ELW71110.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:ELW71110.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:ELW71110.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000011518}. FT DOMAIN 7 283 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 249 276 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 732 AA; 83720 MW; 180D8C26C4F124CB CRC64; MKLNVDGLLV YFPYDYIYPE QFSYMLELKR TLDAKGHGVL EMPSGTGKTV SLLALIMAYQ RAYPLEVTKL IYCSRTVPEI EKVIEELRKL LNFYEKQDGE KLPFLGLALS SRKNLCIHPE VTPLRFGKDV DGKCHSLTAS YVRVQYQQDS SLPHCRFYEE FDAHGRQVPL PMGIYNLDDL KALGRRQGWC PYFLARYSIL HANVVVYSYH YLLDPKIADL VSKELARKAV VVFDEAHNID NVCIDSMSVN LTRRTLDRCQ ANLETLQKTV LRIKETDEQR LREEYRRLVE GLREASAARE TDAHLANPVL PDEWRLRVQH VVQESPPAFL SSLAQRVCIQ RKPLRFCAER LRSLLHTLEI ADLADFSPLT LLANFATLVS TYAKGFTIII EPFDDRTPTI ANPILHFSCM DASLAIKPVF SRFQSVIITS GTLSPLDIYP KILDFHPVTM ATFTMTLARV CLCPMIIGRG NDQVAISSKF ETREDIAVIR NYGNLLLEMS AVVPDGIVAF FTSYQYMEST VASWYEQGIL ENIQRNKLLF IETQDGAETS VALEKYQEAC ENGRGAILLS VARGKVSEGI DFVHHYGRAV IMFGVPYVYT QSRILKARLE YLRDQFQIRE NDFLTFDAMR HAAQCVGRAI RGKTDYGLMV FADKRFARAD KRGKLPRWIQ EHLTDANLNL TVDEGVQVAK YFLRQMAQPF HREDQLGLSL LSLEQLESEE TLRRIEQIAQ QL // ID M0RSX9_MUSAM Unreviewed; 744 AA. AC M0RSX9; DT 03-APR-2013, integrated into UniProtKB/TrEMBL. DT 03-APR-2013, sequence version 1. DT 11-MAY-2016, entry version 24. DE SubName: Full=Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P16990_001}; OS Musa acuminata subsp. malaccensis (Wild banana) (Musa malaccensis). OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; Liliopsida; Zingiberales; Musaceae; OC Musa. OX NCBI_TaxID=214687 {ECO:0000313|EnsemblPlants:GSMUA_Achr11P16990_001, ECO:0000313|Proteomes:UP000012960}; RN [1] {ECO:0000313|EnsemblPlants:GSMUA_Achr11P16990_001} RP IDENTIFICATION. RC STRAIN=subsp. malaccensis RC {ECO:0000313|EnsemblPlants:GSMUA_Achr11P16990_001}; RG EnsemblPlants; RL Submitted (JUN-2013) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EnsemblPlants; GSMUA_Achr11T16990_001; GSMUA_Achr11P16990_001; GSMUA_Achr11G16990_001. DR Gramene; GSMUA_Achr11T16990_001; GSMUA_Achr11P16990_001; GSMUA_Achr11G16990_001. DR OMA; DEVWKYK; -. DR Proteomes; UP000012960; Chromosome 11. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0000724; P:double-strand break repair via homologous recombination; IEA:EnsemblPlants. DR GO; GO:0010286; P:heat acclimation; IEA:EnsemblPlants. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR GO; GO:0045893; P:positive regulation of transcription, DNA-templated; IEA:EnsemblPlants. DR GO; GO:0043687; P:post-translational protein modification; IEA:EnsemblPlants. DR GO; GO:0006457; P:protein folding; IEA:EnsemblPlants. DR GO; GO:0009644; P:response to high light intensity; IEA:EnsemblPlants. DR GO; GO:0042542; P:response to hydrogen peroxide; IEA:EnsemblPlants. DR GO; GO:0010212; P:response to ionizing radiation; IEA:EnsemblPlants. DR GO; GO:0009411; P:response to UV; IEA:EnsemblPlants. DR GO; GO:0000394; P:RNA splicing, via endonucleolytic cleavage and ligation; IEA:EnsemblPlants. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:EnsemblPlants. DR Gene3D; 3.40.50.300; -; 1. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 2. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 3. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000012960}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000012960}. FT DOMAIN 7 225 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 744 AA; 84673 MW; 33C1E7E207AE25AB CRC64; MKFQIEDVTV YFPYEHIYPE QYEYMVELKR ALDARGHCLL EMPTGTGKTL LYCTRTVHEM EKTLAELRLL LSHVPPDLRR SLLALGLSSR KNLCINPTIV SAASRDSVDS ACRRLTASWD LRAFGRDNGW CPYYLARQTI RYANIVVYSY QYLLDPKVAS IISKEMQREC VVVFDEAHNI DNVCIEALSV SIRRQTLEGA TRNLNRMVQE IDSVCSIMGR MLIVASCFAA PFFRYKKLIS TSSGLKLGKE KKGFLNLVGR FKATDATRLR TEYNRLVEGL AQRGSLPITD AWLANPALPD DILKEAVPGN IRRAEHFLSV LRRLVQYLKG RLQTENVETE GPVAFVASVN SQAGIDQKML RFCYDRLHSL MLTLEITDTD EFLHIQTICD FATLIGTYTR GFSIIIEPFD ERMPHIPDPV LQLSCHDASL AIKPVFERFQ SVVITSGTLS PIDLYPRLLN FNPVISRSFT MSLTRDCICP MVLTRGSDQL PVSTKFDMRS DPGVVRNYGR LLLEMVAAVP DGIVCFFVSY SYMDGIVNSW NEMGILQDVM QHKLVFIETQ DVVETTLALD NYRRACDCGR GAVFFSVARG KVAEGIDFDR HYGRLVIMFG VPFQYTLSRI LLARLEYLRE TFQIKEGDFL TFDALRQAAQ CVGRVIRSKA DYGMMIFADK RYSRHDKRSK LPGWILSHLR DAHLNLSTDM ALHIAREFLR RMAQPYDKAG SGGKKTLLTQ EDIERMSGDA MELF // ID M0Y776_HORVD Unreviewed; 441 AA. AC M0Y776; DT 03-APR-2013, integrated into UniProtKB/TrEMBL. DT 03-APR-2013, sequence version 1. DT 13-APR-2016, entry version 17. DE SubName: Full=Uncharacterized protein {ECO:0000313|EnsemblPlants:MLOC_66388.4}; OS Hordeum vulgare var. distichum (Domesticated barley). OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; OC Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum. OX NCBI_TaxID=112509 {ECO:0000313|EnsemblPlants:MLOC_66388.4, ECO:0000313|Proteomes:UP000011116}; RN [1] {ECO:0000313|EnsemblPlants:MLOC_66388.4} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=cv. Morex {ECO:0000313|EnsemblPlants:MLOC_66388.4}; RA Scholz U.; RT "The genome sequence of Hordeum vulgare subsp. vulgare."; RL Submitted (JUN-2012) to the EMBL/GenBank/DDBJ databases. RN [2] {ECO:0000313|EnsemblPlants:MLOC_66388.4} RP IDENTIFICATION. RC STRAIN=subsp. vulgare {ECO:0000313|EnsemblPlants:MLOC_66388.4}; RG EnsemblPlants; RL Submitted (JUN-2015) to UniProtKB. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EnsemblPlants; MLOC_66388.4; MLOC_66388.4; MLOC_66388. DR Gramene; MLOC_66388.4; MLOC_66388.4; MLOC_66388. DR Proteomes; UP000011116; Unassembled WGS sequence. DR ExpressionAtlas; M0Y776; baseline. DR GO; GO:0005634; C:nucleus; IEA:InterPro. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SUPFAM; SSF52540; SSF52540; 2. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW Complete proteome {ECO:0000313|Proteomes:UP000011116}; KW Reference proteome {ECO:0000313|Proteomes:UP000011116}. FT DOMAIN 7 288 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 441 AA; 49646 MW; 3F68D79DB9A4E46A CRC64; MKFDLEGLTV HFPYAAIYPE QHAYMGELKR ALDARGHALL EMPTGTGKTA ALISLITSYS LANPSRPLRL IYCTRTVHEM EKTLAELRLL FSHLPPEASR SLLALGLSSR KNLCVHPQAS ASAARDSVDT ACRRLTASWV RDKAASDPES TPLCEFFESF DRAAAAGDLS SFMPPGVYTL ADLRSLGRER RICPYFLARQ MVKYANVVVY SYQYLLDPKV ASIVSREMQK ECVVVFDEAH NIDNVCIEAL SVSVRKQTLD GAERNLRRIS QEIDRFKATD ANRLRAEYNR LVDGLAQRGN LPISDAWLAN PSLPDDILKE AVPGNIRKAE HFLAVLKRLV KFLDGRLETE NVENEMPVSF VASIHSQAGI DQRMLRFCYD RLHSLLLTLE ITDTDEFMHI QTICDFATLI GTYSRGFSII IEPYDDRMPE IRDPVIQAQL S // ID M1M151_9CLOT Unreviewed; 761 AA. AC M1M151; DT 01-MAY-2013, integrated into UniProtKB/TrEMBL. DT 01-MAY-2013, sequence version 1. DT 11-MAY-2016, entry version 18. DE SubName: Full=Rad3-like DNA helicase {ECO:0000313|EMBL:AGF59285.1}; DE EC=3.6.4.12 {ECO:0000313|EMBL:AGF59285.1}; GN ORFNames=Cspa_c55400 {ECO:0000313|EMBL:AGF59285.1}; OS Clostridium saccharoperbutylacetonicum N1-4(HMT). OC Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; OC Clostridium. OX NCBI_TaxID=931276 {ECO:0000313|EMBL:AGF59285.1, ECO:0000313|Proteomes:UP000011728}; RN [1] {ECO:0000313|EMBL:AGF59285.1, ECO:0000313|Proteomes:UP000011728} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=N1-4(HMT) {ECO:0000313|Proteomes:UP000011728}; RA Poehlein A., Daniel R.; RT "Genome sequence of Clostridium saccharoperbutylacetonicum N1- RT 4(HMT)."; RL Submitted (FEB-2013) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP004121; AGF59285.1; -; Genomic_DNA. DR RefSeq; WP_015395592.1; NZ_AOIF01000001.1. DR EnsemblBacteria; AGF59285; AGF59285; Cspa_c55400. DR KEGG; csr:Cspa_c55400; -. DR Proteomes; UP000011728; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 4. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR014001; Helicase_ATP-bd. DR InterPro; IPR001650; Helicase_C. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF00270; DEAD; 1. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00487; DEXDc; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. DR PROSITE; PS51194; HELICASE_CTER; 1. PE 4: Predicted; KW ATP-binding {ECO:0000313|EMBL:AGF59285.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000011728}; KW Helicase {ECO:0000313|EMBL:AGF59285.1}; KW Hydrolase {ECO:0000313|EMBL:AGF59285.1}; KW Nucleotide-binding {ECO:0000313|EMBL:AGF59285.1}; KW Reference proteome {ECO:0000313|Proteomes:UP000011728}. FT DOMAIN 184 444 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT DOMAIN 589 761 Helicase C-terminal. FT {ECO:0000259|PROSITE:PS51194}. SQ SEQUENCE 761 AA; 89026 MW; B7B3A0D4E555C117 CRC64; MDKIIIKESV RNLVEFCLKQ GDIDNRFSGN GRALEGTKAH QKLQEDNGKI YENYQKEVYL THEFEMKKSV INIEGRADGI INEDDKIIIE EIKSTYKNFS YIDDSNEVHW AQAKVYALIY GEDNKIDTLH IRLSYVQLET DEVKSFERKF TLNELKEFTL KLLEEYERFS ILIYKKMSNR NESIKDLEFP FEKYREGQRK LINIAYQTIK EKEMLFAQAP TGIGKTISTI FPAVKALGSG IGEKIIYLTA KTINRQVAED TYDKLRQGGL KFISITIMAK EKICINKEFD CNPENCIYAK DYYSKVKKVI LDIIEGEDRI SSEILQNYAE KYEVCPFELS LDLSMYCDGI IGDYNYIFDP RVSLGRILEN KGNIVLIDEA HNLIDRARMM YSASLSKDKI MECKKIAKGK LSKIHSVLGK INSYFIDLRN ECEHKSVEWF YEVEEPKDLI KYLQLYLKES EEILIRGNRF EGYGEILQLY FDINAFISTM QLYDENYRTS IEKEAQDLKL TLYCVNPAKN LKEYLSKCYS AIFFSATISP IMYYVNMLGG NDETYRLKLP SPFKRENLNV YLSPINIRYK YRERTIGLVK NKILKFVEEQ LGNYIIFSPS YVYMELLYDE LTKETIKEFE IVKQKQNMSE EEKREFLSKF KENRNLLMLC VLGGMFSEGI DLPGEQLIGS VIVGVGYPMI SMNNEIMKDF YNENGYDYAY VFPGINKVQQ AVGRVIRTET DKGRILLIDD RYATNKYKLL LPSEWYPIKK Y // ID M1WF11_CLAP2 Unreviewed; 714 AA. AC M1WF11; DT 01-MAY-2013, integrated into UniProtKB/TrEMBL. DT 01-MAY-2013, sequence version 1. DT 11-MAY-2016, entry version 22. DE SubName: Full=Probable excision repair protein rhp3 {ECO:0000313|EMBL:CCE30509.1}; GN ORFNames=CPUR_04357 {ECO:0000313|EMBL:CCE30509.1}; OS Claviceps purpurea (strain 20.1) (Ergot fungus) (Sphacelia segetum). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; OC Sordariomycetes; Hypocreomycetidae; Hypocreales; Clavicipitaceae; OC Claviceps. OX NCBI_TaxID=1111077 {ECO:0000313|EMBL:CCE30509.1, ECO:0000313|Proteomes:UP000016801}; RN [1] {ECO:0000313|EMBL:CCE30509.1, ECO:0000313|Proteomes:UP000016801} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=20.1 {ECO:0000313|EMBL:CCE30509.1, RC ECO:0000313|Proteomes:UP000016801}; RX PubMed=23468653; DOI=10.1371/journal.pgen.1003323; RA Schardl C.L., Young C.A., Hesse U., Amyotte S.G., Andreeva K., RA Calie P.J., Fleetwood D.J., Haws D.C., Moore N., Oeser B., RA Panaccione D.G., Schweri K.K., Voisey C.R., Farman M.L., RA Jaromczyk J.W., Roe B.A., O'Sullivan D.M., Scott B., Tudzynski P., RA An Z., Arnaoudova E.G., Bullock C.T., Charlton N.D., Chen L., Cox M., RA Dinkins R.D., Florea S., Glenn A.E., Gordon A., Gueldener U., RA Harris D.R., Hollin W., Jaromczyk J., Johnson R.D., Khan A.K., RA Leistner E., Leuchtmann A., Li C., Liu J., Liu J., Liu M., Mace W., RA Machado C., Nagabhyru P., Pan J., Schmid J., Sugawara K., Steiner U., RA Takach J.E., Tanaka E., Webb J.S., Wilson E.V., Wiseman J.L., RA Yoshida R., Zeng Z.; RT "Plant-symbiotic fungi as chemical engineers: Multi-genome analysis of RT the Clavicipitaceae reveals dynamics of alkaloid loci."; RL PLoS Genet. 9:E1003323-E1003323(2013). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:CCE30509.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CAGA01000022; CCE30509.1; -; Genomic_DNA. DR EnsemblFungi; CCE30509; CCE30509; CPUR_04357. DR Proteomes; UP000016801; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000016801}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000016801}. FT DOMAIN 1 209 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 714 AA; 82335 MW; 73BDB0C356B16849 CRC64; MSEIEKALEE LRELMKYRTK ELGYEEDFRG LGLTSRKNLC LHPSVKREKS GTVVDARCRS LTAGFVKEKK ERGENVDLCV YHDNLDLLEP HNLIPNGVWT FEGILSYGEE HKQCPYFTAR RMMQYCNVVI FSYHYLLDPK IAERVSRDFS KDCIVVFDEA HNIDNVCIEA LSTDITEDSL RRATRGAHNL EQKITEMRRT DQEQLQNEYQ KLINGLRETE QARQEDAFMG SPALPDDLLQ EAIPGNIRRA EHFTAFLKRF IEYLKTRMKV RQVISETPPS FLAHLRENTF IEKKPLRFCA ERLTSLVRTL ELTNIEDYQP LQEVATFATL VATYEKGFLL ILEPYESDTA EVPNPILHFT CLDAAIAIRP VFDRFYSVII TSGTISPLEI YPKMLDFSTV VQESYSMTLA RRSFLPMIVT RGSDQASISS SFQVRNEPSV VRNYGTLLIE FSKITPDGLV VFFPSYLYME SIISMWQGMS ILDEVWKYKL ILVETPDAQE TSLALETYRT ACCNGRGAIL LCVARGKVSE GIDFDHQYGR TVICIGVPFQ YTESRILKAR LEFLRETYRI KENEFLSFDA MRHAAQCLGR VLRGKDDYGI MVLADRRFQK KRNQLPKWIN QGLVDVDSNL STDMAVSSAR RFLRTMAQPF HVEDQEGIST WGYEDLQKHK EKMDLEKIRE LEEAMEGSVE VAAVVDDYDF DDVPDQDLIA LEDF // ID M2N9G1_BAUCO Unreviewed; 803 AA. AC M2N9G1; DT 01-MAY-2013, integrated into UniProtKB/TrEMBL. DT 01-MAY-2013, sequence version 1. DT 11-MAY-2016, entry version 23. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EMC95749.1}; GN ORFNames=BAUCODRAFT_502978 {ECO:0000313|EMBL:EMC95749.1}; OS Baudoinia compniacensis (strain UAMH 10762) (Angels' share fungus). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; OC Dothideomycetes; Dothideomycetidae; Capnodiales; Teratosphaeriaceae; OC Baudoinia. OX NCBI_TaxID=717646 {ECO:0000313|EMBL:EMC95749.1, ECO:0000313|Proteomes:UP000011761}; RN [1] {ECO:0000313|EMBL:EMC95749.1, ECO:0000313|Proteomes:UP000011761} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=UAMH 10762 {ECO:0000313|EMBL:EMC95749.1, RC ECO:0000313|Proteomes:UP000011761}; RX PubMed=23236275; DOI=10.1371/journal.ppat.1003037; RA Ohm R.A., Feau N., Henrissat B., Schoch C.L., Horwitz B.A., RA Barry K.W., Condon B.J., Copeland A.C., Dhillon B., Glaser F., RA Hesse C.N., Kosti I., LaButti K., Lindquist E.A., Lucas S., RA Salamov A.A., Bradshaw R.E., Ciuffetti L., Hamelin R.C., Kema G.H.J., RA Lawrence C., Scott J.A., Spatafora J.W., Turgeon B.G., RA de Wit P.J.G.M., Zhong S., Goodwin S.B., Grigoriev I.V.; RT "Diverse lifestyles and strategies of plant pathogenesis encoded in RT the genomes of eighteen Dothideomycetes fungi."; RL PLoS Pathog. 8:E1003037-E1003037(2012). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; KB445556; EMC95749.1; -; Genomic_DNA. DR RefSeq; XP_007677141.1; XM_007678951.1. DR EnsemblFungi; EMC95749; EMC95749; BAUCODRAFT_502978. DR GeneID; 19114962; -. DR KEGG; bcom:BAUCODRAFT_502978; -. DR KO; K10844; -. DR Proteomes; UP000011761; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000011761}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000011761}. FT DOMAIN 7 284 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 255 297 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 803 AA; 91610 MW; 78B49B97916C5F0B CRC64; MRFMIDDLPV LFPYPRIYPE QYAYMSDLKR TLDAGGHCVL EMPSGTGKTV SLLSLIVAYQ QFYPEHRKLI YCSRTMSEIE KALAELKALM KYRADQLGEV EDFRGLGLTS RKNLCLHPSV KREKSGSVVD ARCRSLTAGF VKEKKERGED VDLCIYHDNL DLLEPHNLIP PGVWTLDGML RYGEQHKQCP YFTARRMMPF CNVIIYSYHY LLDPKIAERV SRELSKDCIV VFDEAHNIDN VCIESLSIDL TEESLRRAGR GAQNLEDKIK QMKETDAEKL QNEYAKLVEG LREADQAREE EAFMSNPALP DDLLKEAIPG NIRRAEHFTA FLKRFIEYLK TRMKVLHVIS ETPPSFLAHL KELTFIEKKP LRFCAERLTS LVRTLELTNI EDYQPLQEVA SFATLVATYE TGFLLILEPY ESDTATVPNP ELHFTCLDAA IAIKPVFDRF SSVIITSGTI SPLEMYPKML GFSTVVQESY AMTLARRSFL PMIVTRGSDQ SQMSTGFQTR DDPQVVRNYG NLLIEFSKLT PDGIVVFFPS YLYMERVISS WQSMGILDSV WKSKLILVET PDSQETSLAL ETYRTACSNG RGAVLLCVAR GKVSEGIDFD HHYGRTVLCI GVPFQYTESR ILKARLEFLR ETYRIRENDF LSFDAMRHCA QCLGRVLRGK DDYGIMVMAD KRFAKKRTQL PKWISSALLE SDSQMSVDQA VASAKKFLKV MSKPFPARLQ EGVSTWSYED LMEHKRKMES EKEREVRNGQ ANGDGYHLHG DQIMAEAQAV EDEMDIDDDM DAAMLELDAG RAA // ID M2RJA9_CERS8 Unreviewed; 794 AA. AC M2RJA9; DT 01-MAY-2013, integrated into UniProtKB/TrEMBL. DT 01-MAY-2013, sequence version 1. DT 11-MAY-2016, entry version 21. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EMD38547.1}; GN ORFNames=CERSUDRAFT_113726 {ECO:0000313|EMBL:EMD38547.1}; OS Ceriporiopsis subvermispora (strain B) (White-rot fungus) (Gelatoporia OS subvermispora). OC Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; OC Agaricomycetes; Polyporales; Gelatoporia. OX NCBI_TaxID=914234 {ECO:0000313|EMBL:EMD38547.1, ECO:0000313|Proteomes:UP000016930}; RN [1] {ECO:0000313|EMBL:EMD38547.1, ECO:0000313|Proteomes:UP000016930} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=B {ECO:0000313|EMBL:EMD38547.1, RC ECO:0000313|Proteomes:UP000016930}; RX PubMed=22434909; DOI=10.1073/pnas.1119912109; RA Fernandez-Fueyo E., Ruiz-Duenas F.J., Ferreira P., Floudas D., RA Hibbett D.S., Canessa P., Larrondo L.F., James T.Y., Seelenfreund D., RA Lobos S., Polanco R., Tello M., Honda Y., Watanabe T., Watanabe T., RA Ryu J.S., Kubicek C.P., Schmoll M., Gaskell J., Hammel K.E., RA St John F.J., Vanden Wymelenberg A., Sabat G., Splinter BonDurant S., RA Syed K., Yadav J.S., Doddapaneni H., Subramanian V., Lavin J.L., RA Oguiza J.A., Perez G., Pisabarro A.G., Ramirez L., Santoyo F., RA Master E., Coutinho P.M., Henrissat B., Lombard V., Magnuson J.K., RA Kuees U., Hori C., Igarashi K., Samejima M., Held B.W., Barry K.W., RA LaButti K.M., Lapidus A., Lindquist E.A., Lucas S.M., Riley R., RA Salamov A.A., Hoffmeister D., Schwenk D., Hadar Y., Yarden O., RA de Vries R.P., Wiebenga A., Stenlid J., Eastwood D., Grigoriev I.V., RA Berka R.M., Blanchette R.A., Kersten P., Martinez A.T., Vicuna R., RA Cullen D.; RT "Comparative genomics of Ceriporiopsis subvermispora and Phanerochaete RT chrysosporium provide insight into selective ligninolysis."; RL Proc. Natl. Acad. Sci. U.S.A. 109:5458-5463(2012). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; KB445795; EMD38547.1; -; Genomic_DNA. DR EnsemblFungi; EMD38547; EMD38547; CERSUDRAFT_113726. DR Proteomes; UP000016930; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000016930}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000016930}. FT DOMAIN 7 291 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 744 767 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 794 AA; 90652 MW; 0AF94996D8AD8AF7 CRC64; MKFHIDDLPI IFPYDRIYPE QYAYMCDLKR TLDATGHCVL EMPSGTGKTV SLLSLIVSYQ QFYPNKRKLI YCSRTVPEIE KALAELKRLM DYRMTCAETE EEKAKEQNFY GLGLTSRKNL CLHPEVSKEK KGRVVDARCR DLTNSAVCEK GRQNPGSVEL CDWHENLGQM EPGNLIPPGI WTLADVLQYG RDKRVCPYFL VRRMMPFVDV IIYSFHYLLD PKVAEQVSRE VSKDAIVVFD EAHNIDNVCI ESLSIDLTRP MLDSAARSVG RLGEKIEEIK KTDASKLQDE YAKLVEGLQE ASQDEDSFMA NPVLPEDLLK EAIPGNIRKA EHFVAFLKRF VEYLKTRMRV LHVVAETPLS FLQHLKDITY IERRPLRFCA ERLQSLVRTL ELNRLDELSA LQKVAGFATL VATYEKGFLL ILEPFETDNA TVPNPIFHLT CLDPAIAIKP VFERFSTVVI TSGTISPLDM YPKMLQFTPV VQETYSMTLT RNSFLPLVIT RGSDQVAISS RFEVRNDPAV VRNFGSILVE YSKIVPDGIV AFFPSYLYME SIVAAWNDMG ILNEVWKHKL IFVETPDANE TSIALENYRR ACDNGRGAVL LSVARGKVSE GIDFDHNYGR AVIMFGVPYQ YTESRILKAR LEYLRDAYRI RESEFLGFDA MRTAAQCVGR VLRGKTDWGL MVFADKRFAR ADKRAKLPRW INQYITETAS NLSTDMALTL SKLFMRTISQ NPNENQTGIS LWTLEDIEKA QAKQKALALE AQQQQDQHMD DAEDEYYGDG GLDDEILREI DLDV // ID M2T400_COCSN Unreviewed; 798 AA. AC M2T400; DT 01-MAY-2013, integrated into UniProtKB/TrEMBL. DT 01-MAY-2013, sequence version 1. DT 11-MAY-2016, entry version 23. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EMD63742.1}; GN ORFNames=COCSADRAFT_37505 {ECO:0000313|EMBL:EMD63742.1}; OS Cochliobolus sativus (strain ND90Pr / ATCC 201652) (Common root rot OS and spot blotch fungus) (Bipolaris sorokiniana). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; OC Dothideomycetes; Pleosporomycetidae; Pleosporales; Pleosporineae; OC Pleosporaceae; Bipolaris. OX NCBI_TaxID=665912 {ECO:0000313|EMBL:EMD63742.1, ECO:0000313|Proteomes:UP000016934}; RN [1] {ECO:0000313|EMBL:EMD63742.1, ECO:0000313|Proteomes:UP000016934} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ND90Pr / ATCC 201652 {ECO:0000313|Proteomes:UP000016934}; RX PubMed=23236275; DOI=10.1371/journal.ppat.1003037; RA Ohm R.A., Feau N., Henrissat B., Schoch C.L., Horwitz B.A., RA Barry K.W., Condon B.J., Copeland A.C., Dhillon B., Glaser F., RA Hesse C.N., Kosti I., LaButti K., Lindquist E.A., Lucas S., RA Salamov A.A., Bradshaw R.E., Ciuffetti L., Hamelin R.C., Kema G.H.J., RA Lawrence C., Scott J.A., Spatafora J.W., Turgeon B.G., RA de Wit P.J.G.M., Zhong S., Goodwin S.B., Grigoriev I.V.; RT "Diverse lifestyles and strategies of plant pathogenesis encoded in RT the genomes of eighteen Dothideomycetes fungi."; RL PLoS Pathog. 8:E1003037-E1003037(2012). RN [2] {ECO:0000313|Proteomes:UP000016934} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ND90Pr / ATCC 201652 {ECO:0000313|Proteomes:UP000016934}; RX PubMed=23357949; DOI=10.1371/journal.pgen.1003233; RA Condon B.J., Leng Y., Wu D., Bushley K.E., Ohm R.A., Otillar R., RA Martin J., Schackwitz W., Grimwood J., MohdZainudin N., Xue C., RA Wang R., Manning V.A., Dhillon B., Tu Z.J., Steffenson B.J., RA Salamov A., Sun H., Lowry S., LaButti K., Han J., Copeland A., RA Lindquist E., Barry K., Schmutz J., Baker S.E., Ciuffetti L.M., RA Grigoriev I.V., Zhong S., Turgeon B.G.; RT "Comparative genome structure, secondary metabolite, and effector RT coding capacity across Cochliobolus pathogens."; RL PLoS Genet. 9:E1003233-E1003233(2013). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; KB445644; EMD63742.1; -; Genomic_DNA. DR RefSeq; XP_007700438.1; XM_007702248.1. DR EnsemblFungi; EMD63742; EMD63742; COCSADRAFT_37505. DR GeneID; 19138998; -. DR KEGG; bsc:COCSADRAFT_37505; -. DR KO; K10844; -. DR Proteomes; UP000016934; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000016934}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000016934}. FT DOMAIN 7 295 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 798 AA; 90923 MW; 8A7E21552BD3A7A1 CRC64; MKFYIDSLPV LFPYPRVYPE QYAYMCDLKR TLDQGGHCVL EMPSGTGKTV SLLSLIIAYQ QHYPEKRKLI YCSRTMSEIE KALAELKALM KYRTTELGYE EEFRGLGLTS RKNLCLHPSV KREKSGTVVD ARCRSLTAGF VKEKKERGED VELCVYHENL DLLEPHNLIP PGVWTFDGIL KYGEQQKQCP YFTARRMMPY CNVIIYSYHY LLDPKIADRV SKELSKDCIV VFDEAHNIDN VCIESLSIDL TEDVLRKATK GVNNLDRKIT EMKSSDAEKL QNEYAKLVEG LRAADEARNE EAFMANPALP DDLLTEAVPG NIRRAEHFVA FLKRFIEYLK TRMKVLNVVA DTPPEFLKHL KDLTFIERKP LRFCAERLTS LVRTLELTNI EDYQPLQEVA TFATLVATYE TGFLLIIEPF ESATATVPNP VLHLTCLDAA IAIKPVFERF YSVIVTSGTM SPLDMYPRML NFNTVVQESF TMTLTRKSFL PMIVDRGNDQ NQVTSQFEHR NDLQVQRNFG NLLIEFCKLT PDGVVVFFPS YLYMESIISA WQGMEILDTV WKYKLILVET PDAQETALAL ETFRTACNNG RGAVLLCVAR GKVSEGIDFD HHYGRTVLCM GVPYQYTESR ILKARLEFLR ETYRIKEADF LSFDAMRHAA QCLGRVIRGK DDYGIMVLAD KRFNKKQTQL PKWIQQGLDA KNTKLSIDQA VGMAKNFLKE MSVPWSRAEQ EGHSSWSLED LEAHQRKKAA HGISGTDNPA MRALEGRAEV ERMDVDGEGD EYGGRADVDA EMAGLADG // ID M2UYQ7_COCH5 Unreviewed; 799 AA. AC M2UYQ7; DT 01-MAY-2013, integrated into UniProtKB/TrEMBL. DT 01-MAY-2013, sequence version 1. DT 11-MAY-2016, entry version 22. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EMD92938.1}; GN ORFNames=COCHEDRAFT_1133207 {ECO:0000313|EMBL:EMD92938.1}; OS Cochliobolus heterostrophus (strain C5 / ATCC 48332 / race O) OS (Southern corn leaf blight fungus) (Bipolaris maydis). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; OC Dothideomycetes; Pleosporomycetidae; Pleosporales; Pleosporineae; OC Pleosporaceae; Bipolaris. OX NCBI_TaxID=701091 {ECO:0000313|EMBL:EMD92938.1, ECO:0000313|Proteomes:UP000016936}; RN [1] {ECO:0000313|EMBL:EMD92938.1, ECO:0000313|Proteomes:UP000016936} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=C5 / ATCC 48332 / race O {ECO:0000313|Proteomes:UP000016936}; RX PubMed=23236275; DOI=10.1371/journal.ppat.1003037; RA Ohm R.A., Feau N., Henrissat B., Schoch C.L., Horwitz B.A., RA Barry K.W., Condon B.J., Copeland A.C., Dhillon B., Glaser F., RA Hesse C.N., Kosti I., LaButti K., Lindquist E.A., Lucas S., RA Salamov A.A., Bradshaw R.E., Ciuffetti L., Hamelin R.C., Kema G.H.J., RA Lawrence C., Scott J.A., Spatafora J.W., Turgeon B.G., RA de Wit P.J.G.M., Zhong S., Goodwin S.B., Grigoriev I.V.; RT "Diverse lifestyles and strategies of plant pathogenesis encoded in RT the genomes of eighteen Dothideomycetes fungi."; RL PLoS Pathog. 8:E1003037-E1003037(2012). RN [2] {ECO:0000313|Proteomes:UP000016936} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=C5 / ATCC 48332 / race O {ECO:0000313|Proteomes:UP000016936}; RX PubMed=23357949; DOI=10.1371/journal.pgen.1003233; RA Condon B.J., Leng Y., Wu D., Bushley K.E., Ohm R.A., Otillar R., RA Martin J., Schackwitz W., Grimwood J., MohdZainudin N., Xue C., RA Wang R., Manning V.A., Dhillon B., Tu Z.J., Steffenson B.J., RA Salamov A., Sun H., Lowry S., LaButti K., Han J., Copeland A., RA Lindquist E., Barry K., Schmutz J., Baker S.E., Ciuffetti L.M., RA Grigoriev I.V., Zhong S., Turgeon B.G.; RT "Comparative genome structure, secondary metabolite, and effector RT coding capacity across Cochliobolus pathogens."; RL PLoS Genet. 9:E1003233-E1003233(2013). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; KB445574; EMD92938.1; -; Genomic_DNA. DR EnsemblFungi; EMD92938; EMD92938; COCHEDRAFT_1133207. DR Proteomes; UP000016936; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000016936}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000016936}. FT DOMAIN 7 295 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 799 AA; 91053 MW; 4D9B4E0E6A1E17EB CRC64; MKFYIDSLPV LFPYPRVYPE QYAYMCDLKR TLDQGGHCVL EMPSGTGKTV SLLSLIIAYQ QHYPEKRKLI YCSRTMSEIE KALAELKALM KYRTTELGYE EEFRGLGLTS RKNLCLHPSV KREKSGTVVD ARCRSLTAGF VKEKKERGED VELCVYHENL DLLEPHNLIP PGVWTFDGIL KYGEQQKQCP YFTARRMMPY CNVIIYSYHY LLDPKIADRV SKELSKDCIV VFDEAHNIDN VCIESLSIDL TEDVLRKATK GVNNLDRKIT EMKSSDAEKL QNEYAKLVEG LRAADEARNE EAFMANPALP DDLLTEAVPG NIRRAEHFVA FLKRFIEYLK TRMKVLNVVA DTPPEFLKHL KDLTFIERKP LRFCAERLTS LVRTLELTNI EDYQPLQEVA TFATLVATYE TGFLLIIEPF ESATATVPNP VLHLTCLDAA IAIKPVFERF YSVIVTSGTM SPLDMYPRML NFNTVVQESF TMTLTRKSFL PMIVDRGNDQ NQVTSQFEHR NDLQVQRNFG NLLIEFCKLT PDGVVVFFPS YLYMESIISA WQGMEILDTV WKYKLILVET PDAQETALAL ETFRTACNNG RGAVLLCVAR GKVSEGIDFD HHYGRTVLCM GVPYQYTESR ILKARLEFLR ETYRIKEADF LSFDAMRHAA QCLGRVIRGK DDYGIMVLAD KRFNKKQTQL PKWIQQGLDA KNTKLSIDQA VGMAKNFLKE MSVPWSRAEQ EGHSSWSLED LEAHQRKKAA HGISGTDNPA MRALEGRAEV ERMDVDGEEG DEYGGRADVD AEMAGLADG // ID M2W1E9_GALSU Unreviewed; 747 AA. AC M2W1E9; DT 01-MAY-2013, integrated into UniProtKB/TrEMBL. DT 01-MAY-2013, sequence version 1. DT 11-MAY-2016, entry version 24. DE SubName: Full=DNA excision repair protein ERCC-2 {ECO:0000313|EMBL:EME29486.1}; GN ORFNames=Gasu_31270 {ECO:0000313|EMBL:EME29486.1}; OS Galdieria sulphuraria (Red alga). OC Eukaryota; Rhodophyta; Bangiophyceae; Cyanidiales; Cyanidiaceae; OC Galdieria. OX NCBI_TaxID=130081 {ECO:0000313|EMBL:EME29486.1, ECO:0000313|Proteomes:UP000030680}; RN [1] {ECO:0000313|Proteomes:UP000030680} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=074W {ECO:0000313|Proteomes:UP000030680}; RX PubMed=23471408; DOI=10.1126/science.1231707; RA Schonknecht G., Chen W.H., Ternes C.M., Barbier G.G., Shrestha R.P., RA Stanke M., Brautigam A., Baker B.J., Banfield J.F., Garavito R.M., RA Carr K., Wilkerson C., Rensing S.A., Gagneul D., Dickenson N.E., RA Oesterhelt C., Lercher M.J., Weber A.P.; RT "Gene transfer from bacteria and archaea facilitated evolution of an RT extremophilic eukaryote."; RL Science 339:1207-1210(2013). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; KB454508; EME29486.1; -; Genomic_DNA. DR RefSeq; XP_005706006.1; XM_005705949.1. DR EnsemblProtists; EME29486; EME29486; Gasu_31270. DR GeneID; 17088278; -. DR KEGG; gsl:Gasu_31270; -. DR KO; K10844; -. DR Proteomes; UP000030680; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000030680}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000030680}. FT DOMAIN 7 293 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 747 AA; 85781 MW; B2C92D0F89D19D0E CRC64; MKFQLDGLNV YFPYAHVYPE QLSYMNQLKK ALDAKGHAVL EMPSGTGKTI TLLSLLTSYL LQTQPSVRKI IYCTRTVEEM EKVMEEANIL YHCLQQEKEV VDGWFLCIGL ASRKHLCLNE QVVSCGEGFL VDGRCRSLTA SWIREKAKND PTIPKCNYMM TLWCNQKQVD EMIIPCGVYS LQDLRRWGEQ NGCCPYFYSR RLLAFANLIV YSYHYLLDPK YRVEVSQLVS RELPQDAIVV FDEAHNIDNV CIEALSVWVN RNTIDDANNA AMQLAHRVVH AKGQSLAMLQ QEYQNLTRGQ TIHHGLTSST LSVNWSEWEM AQPSIHDVHQ TLEETVPPSI RKAEHFIAYL QSLIAYIKNL LNRPEALEMT HNQFLQDFSK ECPVEVKSFR FTSDRLSSLL RTLEIGDWSR FRSLASVAEM ITIASTYSSG FAIILEPFET KTHIWSPVLQ LACLDASLAM MPVTRKFRNV IITSGTLSPL DFYPRMLNFR AAITASFNMS LNRRCVLPLI IGMGENRVLL TSKFNQRGEL QVPKSYGRIL IEISKLVPDG IVGFFPSYEY MELALDVWKE NNVLDELQAM KLLFIETSDG AESSLALRNF RTACDIGRGA IFLSVARGKA AEGIDFDHHY GRCVLLFGMP FQYTESRELK ARLRYLRERF QIMENDFLVF DAMRQAAQCA GRVIRNKSDY GIMVFADRRY ARYDKLTKLP RWILQFLSED QIYIDIDTAL TKIKQFLLEM ANQALII // ID M2XVZ8_GALSU Unreviewed; 751 AA. AC M2XVZ8; DT 01-MAY-2013, integrated into UniProtKB/TrEMBL. DT 01-MAY-2013, sequence version 1. DT 11-MAY-2016, entry version 22. DE SubName: Full=DNA excision repair protein ERCC-2 {ECO:0000313|EMBL:EME27609.1}; GN ORFNames=Gasu_49010 {ECO:0000313|EMBL:EME27609.1}; OS Galdieria sulphuraria (Red alga). OC Eukaryota; Rhodophyta; Bangiophyceae; Cyanidiales; Cyanidiaceae; OC Galdieria. OX NCBI_TaxID=130081 {ECO:0000313|EMBL:EME27609.1, ECO:0000313|Proteomes:UP000030680}; RN [1] {ECO:0000313|Proteomes:UP000030680} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=074W {ECO:0000313|Proteomes:UP000030680}; RX PubMed=23471408; DOI=10.1126/science.1231707; RA Schonknecht G., Chen W.H., Ternes C.M., Barbier G.G., Shrestha R.P., RA Stanke M., Brautigam A., Baker B.J., Banfield J.F., Garavito R.M., RA Carr K., Wilkerson C., Rensing S.A., Gagneul D., Dickenson N.E., RA Oesterhelt C., Lercher M.J., Weber A.P.; RT "Gene transfer from bacteria and archaea facilitated evolution of an RT extremophilic eukaryote."; RL Science 339:1207-1210(2013). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; KB454530; EME27609.1; -; Genomic_DNA. DR RefSeq; XP_005704129.1; XM_005704072.1. DR EnsemblProtists; EME27609; EME27609; Gasu_49010. DR GeneID; 17086500; -. DR KEGG; gsl:Gasu_49010; -. DR KO; K10844; -. DR Proteomes; UP000030680; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 5. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000030680}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000030680}. FT DOMAIN 1 263 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 751 AA; 85193 MW; 32B77CFD8D5E63B3 CRC64; MKELKKTLDA GGHCILEMPT GTGKTVTLLS FFVAYRAARA SIGKLIYCTR TVGEIDKVLE ELERVLAYRR DCNVDVASEN QLVAVGLTTR RNLCLLPAVK DSETREEADS KCRSLTASWV REGITSRSSD SLCPYYENLQ QKGELFQIPP GVYSMSSLNA FGEEQGICPY FTARRSLQYA SIIVYNYHYL LDPKISRMIS TELERDCVVV FDEAHNIDDV CIETMSVHLK KDTIQRCYQN LNHLSGLVQD AKQRNAQQLL EEYQRVLRGT PFLATSETDA LLAAPVLPDS ALQETIPGNI RKAEHFLRFL RRILEYVQNV MQRNVATQEK TGAFLQSMAS LLQSDFKALK FSSDRLQSLI QTLQITHLLE FQPIQTLADF VTILGSYPTG NAFVVIFEPY DERYPSIPDP LLQLACLDAS LAMQPVFSRF RSVILTSGTI SPIELYSRIL MFTPVTAKSL TMSFQRRNVC PMIVTRGADQ LPVSSKYDYR HDPSVVRNYG TLVMEMARIV PDGIVCFFTS YIYMETMIQL WHEMGIIKKI SEYKLIFIET PDNLECTLAL KNYRKACDCG RGALFMCVAR GKVAEGIDFD RHYGRCVIVL GVPFQYTESR VLRARLEFLR TNLQISEGDF LSFDAVRQAA QCIGRVIRSK TDYGIMVFAD KRFNRPDKKN KLPKWVLQFL DDAHCDLSVD MAISIASAFL KQIAQPFHAD AGTGIALISE EQLLELMETN DKKWDSMEHS NYFLSSKVSQ V // ID M3AW61_PSEFD Unreviewed; 776 AA. AC M3AW61; DT 01-MAY-2013, integrated into UniProtKB/TrEMBL. DT 01-MAY-2013, sequence version 1. DT 11-MAY-2016, entry version 22. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EME81363.1}; GN ORFNames=MYCFIDRAFT_189512 {ECO:0000313|EMBL:EME81363.1}; OS Pseudocercospora fijiensis (strain CIRAD86) (Black leaf streak disease OS fungus) (Mycosphaerella fijiensis). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; OC Dothideomycetes; Dothideomycetidae; Capnodiales; Mycosphaerellaceae; OC Pseudocercospora. OX NCBI_TaxID=383855 {ECO:0000313|EMBL:EME81363.1, ECO:0000313|Proteomes:UP000016932}; RN [1] {ECO:0000313|EMBL:EME81363.1, ECO:0000313|Proteomes:UP000016932} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=CIRAD86 {ECO:0000313|EMBL:EME81363.1, RC ECO:0000313|Proteomes:UP000016932}; RX PubMed=23236275; DOI=10.1371/journal.ppat.1003037; RA Ohm R.A., Feau N., Henrissat B., Schoch C.L., Horwitz B.A., RA Barry K.W., Condon B.J., Copeland A.C., Dhillon B., Glaser F., RA Hesse C.N., Kosti I., LaButti K., Lindquist E.A., Lucas S., RA Salamov A.A., Bradshaw R.E., Ciuffetti L., Hamelin R.C., Kema G.H.J., RA Lawrence C., Scott J.A., Spatafora J.W., Turgeon B.G., RA de Wit P.J.G.M., Zhong S., Goodwin S.B., Grigoriev I.V.; RT "Diverse lifestyles and strategies of plant pathogenesis encoded in RT the genomes of eighteen Dothideomycetes fungi."; RL PLoS Pathog. 8:E1003037-E1003037(2012). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; KB446560; EME81363.1; -; Genomic_DNA. DR RefSeq; XP_007928572.1; XM_007930381.1. DR EnsemblFungi; EME81363; EME81363; MYCFIDRAFT_189512. DR GeneID; 19335081; -. DR KEGG; pfj:MYCFIDRAFT_189512; -. DR KO; K10844; -. DR Proteomes; UP000016932; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000016932}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000016932}. FT DOMAIN 7 284 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 248 275 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 776 AA; 88102 MW; E9212D24DD0F26F5 CRC64; MKFYIGDLPV LFPYPRIYPE QYEYMCALKQ TLDSGGHCVL EMPSGTGKTV SLLSLIVAYQ QHYPEHRKLI YCSRTMSEIE KALAELKALM KYRSDQLGHA EDFRGLGLTS RKNLCLHPSV KQEKSGSVVD ARCRSLTAAF VKEKKDRGED VDVCIYHDNL DLLEPHNLIP PGVWTLDGML RYGEQQKQCP YFTARRMMPF CNVIIYSYHY LLDPKIAERV SRELSKDCIV VFDEAHNIDN VCIESLSIDL TEDSLRKAAR GAANLEREIT TMKQTDADKL QNEYAKLVEG LREADAARDE GAFMSNPALP DDLLKEAVPG NIRRAEHFVA FLKRFIEYLK TRMKVLHVIS ETPPSFLQHL KELTFIERKP LRFCAERLTS LVRTLELTNI EDYQPLQEVA TFATLAATYD TGFLLILEPY ESDTATVPNP ILHFTCLDAA IAIKPVFDRF SSVIITSGTI SPLEMYPKML GFECVVQESY TMTLARKSFL PMIVTRGSDQ GQISSGFQTR NDPANVRNYG NLLIEFSKLT PDGIVVFFPS YLYMESVISM WQTMGILDSV WKSKLILVET PDSQETSLAL ETYRTACSNG RGAVLLCVAR GKVSEGIDFD HHYGRTVLCI GVPFQYTESR ILKARLEFLR ETYRIKENDF LSFDAMRHCA QCLGRVLRGK DDYGVMVMAD KRFAKKRNQL PKWINNQLMD SDTNMSVDQA VAAAKKFLKQ MSQPFPISMQ EGISTWSYED LVAHQQKVHA TLITVPHSQA AAYAITILDT IITLQP // ID M3BY15_SPHMS Unreviewed; 806 AA. AC M3BY15; DT 01-MAY-2013, integrated into UniProtKB/TrEMBL. DT 01-MAY-2013, sequence version 1. DT 11-MAY-2016, entry version 21. DE SubName: Full=DNA repair helicase RAD3 {ECO:0000313|EMBL:EMF12951.1}; GN ORFNames=SEPMUDRAFT_149478 {ECO:0000313|EMBL:EMF12951.1}; OS Sphaerulina musiva (strain SO2202) (Poplar stem canker fungus) OS (Septoria musiva). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; OC Dothideomycetes; Dothideomycetidae; Capnodiales; Mycosphaerellaceae; OC Sphaerulina. OX NCBI_TaxID=692275 {ECO:0000313|EMBL:EMF12951.1, ECO:0000313|Proteomes:UP000016931}; RN [1] {ECO:0000313|EMBL:EMF12951.1, ECO:0000313|Proteomes:UP000016931} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=SO2202 {ECO:0000313|EMBL:EMF12951.1, RC ECO:0000313|Proteomes:UP000016931}; RX PubMed=23236275; DOI=10.1371/journal.ppat.1003037; RA Ohm R.A., Feau N., Henrissat B., Schoch C.L., Horwitz B.A., RA Barry K.W., Condon B.J., Copeland A.C., Dhillon B., Glaser F., RA Hesse C.N., Kosti I., LaButti K., Lindquist E.A., Lucas S., RA Salamov A.A., Bradshaw R.E., Ciuffetti L., Hamelin R.C., Kema G.H.J., RA Lawrence C., Scott J.A., Spatafora J.W., Turgeon B.G., RA de Wit P.J.G.M., Zhong S., Goodwin S.B., Grigoriev I.V.; RT "Diverse lifestyles and strategies of plant pathogenesis encoded in RT the genomes of eighteen Dothideomycetes fungi."; RL PLoS Pathog. 8:E1003037-E1003037(2012). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; KB456264; EMF12951.1; -; Genomic_DNA. DR EnsemblFungi; EMF12951; EMF12951; SEPMUDRAFT_149478. DR Proteomes; UP000016931; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EMF12951.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000016931}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EMF12951.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EMF12951.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EMF12951.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000016931}. FT DOMAIN 7 284 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 806 AA; 91676 MW; 1A27098CFE533CB8 CRC64; MKFFIGDLPV LFPYPRIYPE QYAYMCDLKH TLDAGGHCVL EMPSGTGKTV SLLSLIVAYQ QHYPEHRKLI YCSRTMSEIE KALAELKALM KYRADQLGVV EDFRGLGLTS RKNLCLHPSV KREKSGSVVD ARCRSLTAGF VKEKKERGED VDLCIYHDNL DLLEPHNLIP PGVWTLDGML RYGEEQKQCP YFTARRMMPF CNVIIYSYHY LLDPKIAERV SRELSKDCIV VFDEAHNIDN VCIESLSIDL TEDSLRKAAR GAENLDRKIK EMKDTDAEKL QNEYAKLVEG LREADTARDE GAFMSNPALP DDLLKEAVPG NIRRAEHFTA FLKRFIEYLK TRMKVLHVIS ETPPSFLQHL KELTFIEKKP LRFCAERLTS LVRTLELTNI EDYQPLQEVA TFATLAATYD TGFLLILEPY ESDTATVPNP VLHFTCLDAA IAIKPVFERF SSVIITSGTI SPLEMYPKML GFSAVVQESY AMTLARRSFL PMIVTRGSDQ NQISSGFQTR SDPANIRNYG NLIIEFSKLT PDGIVVFFPS YLYMESVISM WQSMGILDQV WKSKLILVET PDSQETSLAL ETYRTACSNG RGAVLLCVAR GKVSEGIDFD HHYGRTVLCI GVPFQYTESR ILKARLEFLR ETYRIRENDF LSFDAMRHCA QCLGRVLRGK DDYGIMVMAD KRFAKKRNQL PKWISGEMME SDSNMSVDQA VAAAKRFLKQ MSKPFPASMQ DGISTWSYED LLAHQAKLKA NQMREELENG EYNGEHRIHG DAVMADAEEQ IREVTDDFDM DDADQSAMLQ AVASDH // ID M3IM20_CANMX Unreviewed; 781 AA. AC M3IM20; DT 01-MAY-2013, integrated into UniProtKB/TrEMBL. DT 01-MAY-2013, sequence version 1. DT 11-MAY-2016, entry version 19. DE SubName: Full=DNA repair helicase RAD3 {ECO:0000313|EMBL:EMG47431.1}; GN ORFNames=G210_2245 {ECO:0000313|EMBL:EMG47431.1}; OS Candida maltosa (strain Xu316) (Yeast). OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; OC Saccharomycetes; Saccharomycetales; Debaryomycetaceae; OC Candida/Lodderomyces clade; Candida. OX NCBI_TaxID=1245528 {ECO:0000313|EMBL:EMG47431.1, ECO:0000313|Proteomes:UP000011777}; RN [1] {ECO:0000313|EMBL:EMG47431.1, ECO:0000313|Proteomes:UP000011777} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Xu316 {ECO:0000313|Proteomes:UP000011777}; RA Yu J., Wang Q., Geng X., Bao W., He P., Cai J.; RT "Genome sequence of Candida maltosa Xu316, a potential industrial RT strain for xylitol and ethanol production."; RL Submitted (FEB-2013) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:EMG47431.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AOGT01001582; EMG47431.1; -; Genomic_DNA. DR EnsemblFungi; EMG47431; EMG47431; G210_2245. DR Proteomes; UP000011777; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EMG47431.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000011777}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EMG47431.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EMG47431.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EMG47431.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000011777}. FT DOMAIN 7 295 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 266 308 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 781 AA; 89841 MW; 531148FEF6D0664B CRC64; MKFYIDDLPV LFPYPRIYPE QYAYMCDIKK TLDVGGNCIL EMPSGTGKTV SLLSLTVAYQ MHYPEHRKII YCSRTMSEIE KALIELHKLM EYRASELGEV EDFRGLGLTS RKNLCLHPTI SKERKGVVVD EKCRRITNGQ LKDKIEKGVV TEEEQIRNPE TYSLCSFHEK LYDLEPHNLI PPGVYSFDAL IKYCKEEGTC PYFTVRRMIP FCNIIIYSYH YLLDPKIADR VSKELSKDSI IIFDEAHNID NVCIESLSLD LTEDTLKRAT RGANRLSEAI EEMKIQDSEK LQNEYEQLVE GLRQAEIARD QELFMANPVL PQDLLNEAIP GNIRKGEHFI AFLKRFVEYL KTRMKVLHVI SETPTSFLQH LKELTYIDKK PLKFCSERLS LLVRTLELTE IEDFNALKDI ATFATLVSTY DTGFQLILEA YETEGSTVPN PILHFTCLDA SIAIKPVFER FSSVIITSGT ISPLDMYPKM LNFQTVIQQS YAMTLARRSF LPMIVTKGSD QVSISSRFEI RNDPSVVRNY GSLLIEFAKI TPDGMVVFFP SYLYMESIIS MWQNMGVLDE VWKHKLILVE TPDAQETSLA LETYRKACSN GRGAVLLSVA RGKVSEGIDF DHHYGRTVLM IGIPFQYTES RILKARLEFM RDHFQIKEND FLSFDAMRHA AQCLGRVLRG KDDYGIMVLA DRRFSRKKNQ LPKWIAQALY DSDTNLSTDM ALATGKKFLR SLAQPSNPKD QEGVSVWNLE QLQEHQKQFK KVEEVEETDL MDIDDEDLDL L // ID M3VYY5_FELCA Unreviewed; 760 AA. AC M3VYY5; DT 01-MAY-2013, integrated into UniProtKB/TrEMBL. DT 01-MAY-2013, sequence version 1. DT 11-MAY-2016, entry version 28. DE SubName: Full=Uncharacterized protein {ECO:0000313|Ensembl:ENSFCAP00000002466}; GN Name=ERCC2 {ECO:0000313|Ensembl:ENSFCAP00000002466}; OS Felis catus (Cat) (Felis silvestris catus). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; OC Felinae; Felis. OX NCBI_TaxID=9685 {ECO:0000313|Ensembl:ENSFCAP00000002466, ECO:0000313|Proteomes:UP000011712}; RN [1] {ECO:0000313|Ensembl:ENSFCAP00000002466, ECO:0000313|Proteomes:UP000011712} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Abyssinian {ECO:0000313|Ensembl:ENSFCAP00000002466, RC ECO:0000313|Proteomes:UP000011712}; RX PubMed=17975172; DOI=10.1101/gr.6380007; RA Pontius J.U., Mullikin J.C., Smith D.R., Lindblad-Toh K., Gnerre S., RA Clamp M., Chang J., Stephens R., Neelam B., Volfovsky N., RA Schaffer A.A., Agarwala R., Narfstrom K., Murphy W.J., Giger U., RA Roca A.L., Antunes A., Menotti-Raymond M., Yuhki N., RA Pecon-Slattery J., Johnson W.E., Bourque G., Tesler G., O'Brien S.J.; RT "Initial sequence and comparative analysis of SAA cat genome."; RL Genome Res. 17:1675-1689(2007). RN [2] {ECO:0000313|Ensembl:ENSFCAP00000002466} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Abyssinian {ECO:0000313|Ensembl:ENSFCAP00000002466}; RA Hillier L.W., Warren W., Obrien S., Wilson R.K.; RT "Sequence assembly of the Felis catus genome version 6.2."; RL Submitted (SEP-2011) to the EMBL/GenBank/DDBJ databases. RN [3] {ECO:0000313|Ensembl:ENSFCAP00000002466} RP IDENTIFICATION. RC STRAIN=breed Abyssinian {ECO:0000313|Ensembl:ENSFCAP00000002466}; RG Ensembl; RL Submitted (MAR-2013) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an Ensembl CC automatic analysis pipeline and should be considered as CC preliminary data. {ECO:0000313|Ensembl:ENSFCAP00000002466}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AANG02103890; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AANG02103891; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AANG02103892; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR STRING; 9685.ENSFCAP00000002466; -. DR Ensembl; ENSFCAT00000002680; ENSFCAP00000002466; ENSFCAG00000002679. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR GeneTree; ENSGT00550000075092; -. DR InParanoid; M3VYY5; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG70W3CM; -. DR Proteomes; UP000011712; Chromosome E2. DR GO; GO:0019907; C:cyclin-dependent protein kinase activating kinase holoenzyme complex; IEA:Ensembl. DR GO; GO:0005737; C:cytoplasm; IEA:Ensembl. DR GO; GO:0005675; C:holo TFIIH complex; IEA:Ensembl. DR GO; GO:0071817; C:MMXD complex; IEA:Ensembl. DR GO; GO:0043139; F:5'-3' DNA helicase activity; IEA:Ensembl. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0008353; F:RNA polymerase II carboxy-terminal domain kinase activity; IEA:Ensembl. DR GO; GO:0007568; P:aging; IEA:Ensembl. DR GO; GO:0006915; P:apoptotic process; IEA:Ensembl. DR GO; GO:0030282; P:bone mineralization; IEA:Ensembl. DR GO; GO:0008283; P:cell proliferation; IEA:Ensembl. DR GO; GO:0032289; P:central nervous system myelin formation; IEA:Ensembl. DR GO; GO:0007059; P:chromosome segregation; IEA:Ensembl. DR GO; GO:0040016; P:embryonic cleavage; IEA:Ensembl. DR GO; GO:0043249; P:erythrocyte maturation; IEA:Ensembl. DR GO; GO:0030198; P:extracellular matrix organization; IEA:Ensembl. DR GO; GO:0035315; P:hair cell differentiation; IEA:Ensembl. DR GO; GO:0048820; P:hair follicle maturation; IEA:Ensembl. DR GO; GO:0060218; P:hematopoietic stem cell differentiation; IEA:Ensembl. DR GO; GO:0001701; P:in utero embryonic development; IEA:Ensembl. DR GO; GO:0035264; P:multicellular organism growth; IEA:Ensembl. DR GO; GO:0033683; P:nucleotide-excision repair, DNA incision; IEA:Ensembl. DR GO; GO:0043388; P:positive regulation of DNA binding; IEA:Ensembl. DR GO; GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IEA:Ensembl. DR GO; GO:0009791; P:post-embryonic development; IEA:Ensembl. DR GO; GO:1901990; P:regulation of mitotic cell cycle phase transition; IEA:Ensembl. DR GO; GO:0006979; P:response to oxidative stress; IEA:Ensembl. DR GO; GO:0021510; P:spinal cord development; IEA:Ensembl. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:Ensembl. DR GO; GO:0006283; P:transcription-coupled nucleotide-excision repair; IEA:Ensembl. DR GO; GO:0009650; P:UV protection; IEA:Ensembl. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000011712}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000011712}. FT DOMAIN 7 283 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 760 AA; 86973 MW; 6E43591163620C36 CRC64; MKLNVDGLLV YFPYDYIYPE QFSYMLELKR TLDAKGHGVL EMPSGTGKTV SLLALIMAYQ RAYPLEVTKL IYCSRTVPEI EKVIEELRKL LHFYEKQEGE KLPFLGLALS SRKNLCIHPE VMPLRFGKDV DGKCHSLTAS YVRAQYQQDP SLPHCRFYEE FDVHGRQVPL PAGIYNLDDL KALGRRQGWC PYFLARYSIL HANVVVYSYH YLLDPKIAEL VSKELARKAV VVFDEAHNID NVCIDSMSVN ITRRTLDRCQ GNLETLQKTV LRIKETDEQR LREEYRRLVE GLREASAARE TDAHLANPVL PDEVLQEAVP GSIRTAEHFL GFLRRLLEYV KWRLRVQHVV QESPPAFLSG LAQRVCIQRK PLRFCAERLR SLLHTLEIAD LADFSPLTLL ANFATLVSTY AKGFTIIIEP FDDRTPTIAN PILHFSCMDA SLAIKPVFER FQSVIITSGT LSPLDIYPKI LDFHPVTMAT FTMTLARVCL CPMIIGRGND QVAISSKFET REDIAVIRNY GNLLLEMSAV VPDGIVAFFT SYQYMESTVA SWYEQGILEN IQRNKLLFIE TQDGAETSVA LEKYQEACEN GRGAILLSVA RGKVSEGIDF VHHYGRAVIM FGVPYVYTQS RILKARLEYL RDQFQIREND FLTFDAMRHA AQCVGRAIRG KTDYGLMVFA DKRFARADKR GKLPRWIQEH LTDANLNLTV DEGVQVAKYF LRQMAQPFHR EDQLGLSLLS LEQLESEETL RRIEQIAQQL // ID M3Y3N7_MUSPF Unreviewed; 815 AA. AC M3Y3N7; DT 01-MAY-2013, integrated into UniProtKB/TrEMBL. DT 01-MAY-2013, sequence version 1. DT 11-MAY-2016, entry version 26. DE SubName: Full=Uncharacterized protein {ECO:0000313|Ensembl:ENSMPUP00000005938}; GN Name=ERCC2 {ECO:0000313|Ensembl:ENSMPUP00000005938}; OS Mustela putorius furo (European domestic ferret) (Mustela furo). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Mustelidae; OC Mustelinae; Mustela. OX NCBI_TaxID=9669 {ECO:0000313|Ensembl:ENSMPUP00000005938, ECO:0000313|Proteomes:UP000000715}; RN [1] {ECO:0000313|Ensembl:ENSMPUP00000005938} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ID#1420 {ECO:0000313|Ensembl:ENSMPUP00000005938}; RA Di Palma F., Alfoldi J., Johnson J., Jaffe D., Berlin A., Gnerre S., RA Grabherr M., Hall G., Lara M., MacCallum I., Mauceli E., RA Przyblyski D., Ribeiro F., Russell P., Sharpe T., Turner-Maier J., RA Walker B.J., Young S., Birren B., Lindblad-Toh K.; RL Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases. RN [2] {ECO:0000313|Ensembl:ENSMPUP00000005938} RP IDENTIFICATION. RG Ensembl; RL Submitted (MAR-2013) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an Ensembl CC automatic analysis pipeline and should be considered as CC preliminary data. {ECO:0000313|Ensembl:ENSMPUP00000005938}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AEYP01068426; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AEYP01068427; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR STRING; 9669.ENSMPUP00000005938; -. DR Ensembl; ENSMPUT00000006042; ENSMPUP00000005938; ENSMPUG00000005989. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR GeneTree; ENSGT00550000075092; -. DR InParanoid; M3Y3N7; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG70W3CM; -. DR Proteomes; UP000000715; Unassembled WGS sequence. DR GO; GO:0019907; C:cyclin-dependent protein kinase activating kinase holoenzyme complex; IEA:Ensembl. DR GO; GO:0005737; C:cytoplasm; IEA:Ensembl. DR GO; GO:0005675; C:holo TFIIH complex; IEA:Ensembl. DR GO; GO:0071817; C:MMXD complex; IEA:Ensembl. DR GO; GO:0043139; F:5'-3' DNA helicase activity; IEA:Ensembl. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0008353; F:RNA polymerase II carboxy-terminal domain kinase activity; IEA:Ensembl. DR GO; GO:0007568; P:aging; IEA:Ensembl. DR GO; GO:0006915; P:apoptotic process; IEA:Ensembl. DR GO; GO:0030282; P:bone mineralization; IEA:Ensembl. DR GO; GO:0008283; P:cell proliferation; IEA:Ensembl. DR GO; GO:0032289; P:central nervous system myelin formation; IEA:Ensembl. DR GO; GO:0007059; P:chromosome segregation; IEA:Ensembl. DR GO; GO:0040016; P:embryonic cleavage; IEA:Ensembl. DR GO; GO:0043249; P:erythrocyte maturation; IEA:Ensembl. DR GO; GO:0030198; P:extracellular matrix organization; IEA:Ensembl. DR GO; GO:0035315; P:hair cell differentiation; IEA:Ensembl. DR GO; GO:0048820; P:hair follicle maturation; IEA:Ensembl. DR GO; GO:0060218; P:hematopoietic stem cell differentiation; IEA:Ensembl. DR GO; GO:0001701; P:in utero embryonic development; IEA:Ensembl. DR GO; GO:0035264; P:multicellular organism growth; IEA:Ensembl. DR GO; GO:0033683; P:nucleotide-excision repair, DNA incision; IEA:Ensembl. DR GO; GO:0043388; P:positive regulation of DNA binding; IEA:Ensembl. DR GO; GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IEA:Ensembl. DR GO; GO:0009791; P:post-embryonic development; IEA:Ensembl. DR GO; GO:1901990; P:regulation of mitotic cell cycle phase transition; IEA:Ensembl. DR GO; GO:0006979; P:response to oxidative stress; IEA:Ensembl. DR GO; GO:0021510; P:spinal cord development; IEA:Ensembl. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:Ensembl. DR GO; GO:0006283; P:transcription-coupled nucleotide-excision repair; IEA:Ensembl. DR GO; GO:0009650; P:UV protection; IEA:Ensembl. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000000715}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000000715}. FT DOMAIN 62 338 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 132 155 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 815 AA; 92526 MW; 582BC21F4979188B CRC64; MVSEEMPKGP EAPGKLGDPR GKPAPASNPS RPDGWGLWGL ERGCGGEGLS RSPPAARLNV DGLLVYFPYD YIYPEQFSYM LELKRTLDAK GHGVLEMPSG TGKTVSLLAL IMAYQRAYPL EVTKLIYCSR TVPEIEKVIE ELRKLLNFYE KQEGEKLPFL GLALSSRKNL CIHPEVMPLR FGKDVDGKCH SLTASYVRAQ YQQDPSLPHC RFYEEFDVHG RQVPLPAGIY NLDDLKALGR RQGWCPYFLA RYSILHANVV VYSYHYLLDP KIAELVSKEL ARKAVVVFDE AHNIDNVCID SMSVNLTRRT LDRCQGNLET LQKTVLRIKE TDEQRLREEY RRLVEGLREA SAARETDAHL ANPVLPDEVL QEAVPGSIRT AEHFLGFLRR LLEYVKWRLR VQHVVQESPP AFLSGLAQRV CIQRKPLRFC AERLRSLLHT LEIADLADFS PLTLLANFAT LVSTYAKGFT IIIEPFDDRT PTIANPILHF SCMDASLAIK PVFERFQSVI ITSGTLSPLD IYPKILDFHP VTMATFTMTL ARVCLCPMII GRGNDQVAIS SKFETREDIA VIRNYGNLLL EMSAVVPDGI VAFFTSYQYM ESTVASWYEQ GILENIQRNK LLFIETQDGA ETSVALEKYQ EACENGRGAI LLSVARGKVS EGIDFVHHYG RAVIMFGVPY VYTQSRILKA RLEYLRDQFQ IRENDFLTFD AMRHAAQCVG RAIRGKTDYG LMVFADKRFA RADKRGKLPR WIQEHLTDAN LNLTVDEGVQ VAKYFLRQMA QPFHREDQLG LSLLSLEQLE SEETLRRIEQ IAQQL // ID M3ZP14_XIPMA Unreviewed; 670 AA. AC M3ZP14; DT 01-MAY-2013, integrated into UniProtKB/TrEMBL. DT 01-MAY-2013, sequence version 1. DT 11-MAY-2016, entry version 26. DE SubName: Full=Uncharacterized protein {ECO:0000313|Ensembl:ENSXMAP00000003957}; OS Xiphophorus maculatus (Southern platyfish) (Platypoecilus maculatus). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; OC Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; OC Poeciliinae; Xiphophorus. OX NCBI_TaxID=8083 {ECO:0000313|Ensembl:ENSXMAP00000003957, ECO:0000313|Proteomes:UP000002852}; RN [1] {ECO:0000313|Ensembl:ENSXMAP00000003957} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=JP 163 A {ECO:0000313|Ensembl:ENSXMAP00000003957}; RA Walter R., Schartl M., Warren W.; RL Submitted (JAN-2012) to the EMBL/GenBank/DDBJ databases. RN [2] {ECO:0000313|Ensembl:ENSXMAP00000003957} RP IDENTIFICATION. RC STRAIN=JP 163 A {ECO:0000313|Ensembl:ENSXMAP00000003957}; RG Ensembl; RL Submitted (MAR-2013) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an Ensembl CC automatic analysis pipeline and should be considered as CC preliminary data. {ECO:0000313|Ensembl:ENSXMAP00000003957}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AGAJ01038119; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR STRING; 8083.ENSXMAP00000003957; -. DR Ensembl; ENSXMAT00000003962; ENSXMAP00000003957; ENSXMAG00000003922. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR GeneTree; ENSGT00550000075092; -. DR InParanoid; M3ZP14; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG70W3CM; -. DR Proteomes; UP000002852; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 3. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000002852}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000002852}. FT DOMAIN 1 195 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 159 186 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 670 AA; 76559 MW; 4C588FF0694F99B9 CRC64; MEFYAKETGE VNNFLALSLS SRKNLCIHPE VSSLRFGKEV DGKCHSLTAS YIRAQRHSNP NQPVCRFYEE FDAVGRQVPL PAGIYNLDDL KDFGRRKGWC PYYLARYAIL HANIVVYSYH YLLDPKIADL VSKELAKKSV VVFDEAHNID NVCIDSMSVN ITRRTLDRCQ NNVDTLQNTI HKIKETDAAK LREEYRRLVE GLKEANVARE TDIYLANPVL PDEVLQEAVP GSIRTAEHFV GFLRRFLEYL KARLRVQHVV QESAPQFLKD IFDKVCIDRK PLRFCAERLQ SLLRTLEIAD IADFSAVTLI SNFATLVSTY SQGFTIIIEP FEDRTPTIAN PVLHFSCMDP SIAIKPVFQR FQSVIITSGT LSPLDIYPRI LDFRPVTMAS FTMTLARTCL CPLIVGRGND QVALSSKFET REDFAVIRNY GNLLLEMSAV VPDGIVAFFT SYVYMENIVA SWYEQGILEN IQKNKLIFIE TQDAAETSMA LEKYQEACEN GRGAILLSVA RGKVSEGIDF VHHFGRAVIM FGVPYVYTQS RILKARLEYL RDQFQIREND FLTFDAMRHA AQCVGRAIRG KTDYGLMIFA DKRYARSDKR GKLPRWIQEH INDGSLNLTV DEAVQLSKHF LRQMAQPFRQ EDQLGLSLLT LEQLQSEEML QKISQMAHQT // ID M4BV52_HYAAE Unreviewed; 788 AA. AC M4BV52; DT 01-MAY-2013, integrated into UniProtKB/TrEMBL. DT 01-MAY-2013, sequence version 1. DT 11-MAY-2016, entry version 23. DE SubName: Full=Uncharacterized protein {ECO:0000313|EnsemblProtists:HpaP810393}; OS Hyaloperonospora arabidopsidis (strain Emoy2) (Downy mildew agent) OS (Peronospora arabidopsidis). OC Eukaryota; Stramenopiles; Oomycetes; Peronosporales; Peronosporaceae; OC Hyaloperonospora. OX NCBI_TaxID=559515 {ECO:0000313|EnsemblProtists:HpaP810393, ECO:0000313|Proteomes:UP000011713}; RN [1] {ECO:0000313|EnsemblProtists:HpaP810393} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Emoy2 {ECO:0000313|EnsemblProtists:HpaP810393}; RX PubMed=21148394; DOI=10.1126/science.1195203; RA Baxter L., Tripathy S., Ishaque N., Boot N., Cabral A., Kemen E., RA Thines M., Ah-Fong A., Anderson R., Badejoko W., Bittner-Eddy P., RA Boore J.L., Chibucos M.C., Coates M., Dehal P., Delehaunty K., RA Dong S., Downton P., Dumas B., Fabro G., Fronick C., RA Fuerstenberg S.I., Fulton L., Gaulin E., Govers F., Hughes L., RA Humphray S., Jiang R.H., Judelson H., Kamoun S., Kyung K., Meijer H., RA Minx P., Morris P., Nelson J., Phuntumart V., Qutob D., Rehmany A., RA Rougon-Cardoso A., Ryden P., Torto-Alalibo T., Studholme D., Wang Y., RA Win J., Wood J., Clifton S.W., Rogers J., Van den Ackerveken G., RA Jones J.D., McDowell J.M., Beynon J., Tyler B.M.; RT "Signatures of adaptation to obligate biotrophy in the RT Hyaloperonospora arabidopsidis genome."; RL Science 330:1549-1551(2010). RN [2] {ECO:0000313|EnsemblProtists:HpaP810393} RP IDENTIFICATION. RC STRAIN=Emoy2 {ECO:0000313|EnsemblProtists:HpaP810393}; RG EnsemblProtists; RL Submitted (JUN-2015) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; JH597967; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EnsemblProtists; HpaT810393; HpaP810393; HpaG810393. DR InParanoid; M4BV52; -. DR Proteomes; UP000011713; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR006935; Helicase/UvrB_N. DR InterPro; IPR014001; Helicase_ATP-bd. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR Pfam; PF04851; ResIII; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00487; DEXDc; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000011713}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000011713}. FT DOMAIN 7 298 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 788 AA; 89169 MW; 261772F32C5CEABC CRC64; MKIDIEGLEV VFPYERMYPE QLQYMRELKR ALDAQGHCML EMPTGTGKTV SLLALVLAYK HAHSTAGKLV YCTRTVPEMA KCVEELKRLV VYRTQYYGTQ AQVTAVCLSS RRNMCVHSRV MAHADGEDVD GQCRQMTASW VRARAARAAN QVQDAQSTPA IAETSVETCS FYETYDARRS DDSVLAPGVY SVEDLKELGV HKGWCPYFLT RYAVTFADVV VFNYQYMLDP KVSQLVSRSF EKESIIVFDE AHNIDNVCIE ALSVDLDRRA LDRASRNLTT LSNQVNKLKQ ADKSRLDAEY RRLVEGLRSS NAVVAPTYSH PATNHAIDTS NDIMLANPVL PDDVLDEAIP GNIRKAEHFV AFMRRLIEYL RQRIRVRQVE SETPQAFLHH LHQAISVDIK PMKFCYTRLN SLLRTLEVTN LEEYNSLTHV ADFATLVATY ADGFMLIIEP FDSASGVHDP VLQLSCLDAS LAIRPVFERF SSVIITSGTL SPIDLYPRLL NFNPVIRESL PMSVYRASIC PLVITRGSDQ MPVSTKFDLR DDMSVVRNYG TLLLEMAACT PDGMVCFFPS YLYMEKIIGQ WDSLGVLKRV LSSKLLFIET KDIVETTLAL DNYKKACDCG RGAIFFSVAR GKVAEGIDFD RHYGRAVLLF GIPFQYTLSN TLRARLEYLR YTHQIREGDF LTFDALRQAA QCAGRVLRSK TDYGLVIFAD SRYNRADKRN KLPPWITQFL LTSHLNLSVD MAVFMAKKYL SLMAQPVDEF TNVNSILLDA DGVSKWLGKH PKEDEPVH // ID M4EP04_BRARP Unreviewed; 1027 AA. AC M4EP04; DT 01-MAY-2013, integrated into UniProtKB/TrEMBL. DT 01-MAY-2013, sequence version 1. DT 11-MAY-2016, entry version 24. DE SubName: Full=Uncharacterized protein {ECO:0000313|EnsemblPlants:Bra030524.1-P}; GN Name=Bra030524 {ECO:0000313|EnsemblPlants:Bra030524.1-P}; OS Brassica rapa subsp. pekinensis (Chinese cabbage) (Brassica OS pekinensis). OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; OC Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; OC Brassica. OX NCBI_TaxID=51351 {ECO:0000313|EnsemblPlants:Bra030524.1-P, ECO:0000313|Proteomes:UP000011750}; RN [1] {ECO:0000313|EnsemblPlants:Bra030524.1-P, ECO:0000313|Proteomes:UP000011750} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=cv. Chiifu-401-42 {ECO:0000313|EnsemblPlants:Bra030524.1-P, RC ECO:0000313|Proteomes:UP000011750}; RX PubMed=21873998; DOI=10.1038/ng.919; RG Brassica rapa Genome Sequencing Project Consortium; RA Wang X., Wang H., Wang J., Sun R., Wu J., Liu S., Bai Y., Mun J.H., RA Bancroft I., Cheng F., Huang S., Li X., Hua W., Wang J., Wang X., RA Freeling M., Pires J.C., Paterson A.H., Chalhoub B., Wang B., RA Hayward A., Sharpe A.G., Park B.S., Weisshaar B., Liu B., Li B., RA Liu B., Tong C., Song C., Duran C., Peng C., Geng C., Koh C., Lin C., RA Edwards D., Mu D., Shen D., Soumpourou E., Li F., Fraser F., RA Conant G., Lassalle G., King G.J., Bonnema G., Tang H., Wang H., RA Belcram H., Zhou H., Hirakawa H., Abe H., Guo H., Wang H., Jin H., RA Parkin I.A., Batley J., Kim J.S., Just J., Li J., Xu J., Deng J., RA Kim J.A., Li J., Yu J., Meng J., Wang J., Min J., Poulain J., Wang J., RA Hatakeyama K., Wu K., Wang L., Fang L., Trick M., Links M.G., Zhao M., RA Jin M., Ramchiary N., Drou N., Berkman P.J., Cai Q., Huang Q., Li R., RA Tabata S., Cheng S., Zhang S., Zhang S., Huang S., Sato S., Sun S., RA Kwon S.J., Choi S.R., Lee T.H., Fan W., Zhao X., Tan X., Xu X., RA Wang Y., Qiu Y., Yin Y., Li Y., Du Y., Liao Y., Lim Y., Narusaka Y., RA Wang Y., Wang Z., Li Z., Wang Z., Xiong Z., Zhang Z.; RT "The genome of the mesopolyploid crop species Brassica rapa."; RL Nat. Genet. 43:1035-1039(2011). RN [2] {ECO:0000313|EnsemblPlants:Bra030524.1-P} RP IDENTIFICATION. RC STRAIN=cv. Chiifu-401-42 {ECO:0000313|EnsemblPlants:Bra030524.1-P}; RG EnsemblPlants; RL Submitted (APR-2015) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EnsemblPlants; Bra030524.1; Bra030524.1-P; Bra030524. DR Gramene; Bra030524.1; Bra030524.1-P; Bra030524. DR InParanoid; M4EP04; -. DR Proteomes; UP000011750; Chromosome A08. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0000724; P:double-strand break repair via homologous recombination; IEA:EnsemblPlants. DR GO; GO:0010286; P:heat acclimation; IEA:EnsemblPlants. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR GO; GO:0045893; P:positive regulation of transcription, DNA-templated; IEA:EnsemblPlants. DR GO; GO:0043687; P:post-translational protein modification; IEA:EnsemblPlants. DR GO; GO:0006457; P:protein folding; IEA:EnsemblPlants. DR GO; GO:0009644; P:response to high light intensity; IEA:EnsemblPlants. DR GO; GO:0042542; P:response to hydrogen peroxide; IEA:EnsemblPlants. DR GO; GO:0010212; P:response to ionizing radiation; IEA:EnsemblPlants. DR GO; GO:0009411; P:response to UV; IEA:EnsemblPlants. DR GO; GO:0000394; P:RNA splicing, via endonucleolytic cleavage and ligation; IEA:EnsemblPlants. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:EnsemblPlants. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000011750}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000011750}. FT DOMAIN 302 580 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 1027 AA; 116204 MW; 4F2AD2174F518003 CRC64; MEMEEGEGST EEKYDVDIAT TASSLGGSGV FHIINDILGF VLYMHQQIPS VLQDMSLDFD GLQTEFTDLE ANLTQPDVKP LVRRKLLSRK REVKHEIKKM QKLMSTISTL RSALQLLIRE APGVQRVVLI LGGSPLRPQK AYELFFTHSV DVLRFEGDFS KNKATEALSK KTIRALISTG AGSTSCPGPM RLFILVQAPP SLNLPQHFLP KRDFRYNRKF VPLKLRFKCK TQDNETNSPF NYDTNDLIWF LSLSLVNNTQ ASILAGNRST LLSAPTPISP VNFICHSTRG RRRKKMIFKI EDVTVYFPYD NIYPEQYEYM VELKRALDAK GHCLLEMPTG TGKTIALLSL ITSYRLSRPD SPIKLVYCTR TVHEMEKTLG ELKILHDYQV THLGAQAKIL ALGLSSRKNL CVNPKVLAAE NRDSVDAACR KRTASWVRAL AAENPNVELC DYFESYEKAA DNALLPPGVY TLEDLRAFGK NRGWCPYFLA RHMVQFANVI VYSYQYLLDP KVAGIISKEL QKESVIVFDE AHNIDNVCIE ALSVSVRRVT LEGANRNLNK IRQEIDRFKA TDAGRLRAEY NRLIEGLALR GDLSGTDQWL ANPALPNDIL KEAVPGNIRR AEHFVHVLRR LLQYLEGRLD TENVEKESPV SFVSSLNSQA GIEQKTLKFC YDRLHSLMMT LEITDTDEFL PIQTVCDFAT LVGTYARGFS IIIEPYDERM PHIPDPILQL SCHDASLAIK PVFDRFQSVV ITSGTLSPID LYPRLLSFNP VVSRSFKMSM TRDCICPMVL TRGSDQLPVS TKFDMRSDPG VVRNYGKLLV EMVSVVPDGV VCFFVSYSYM DGIIATWNET GILKEITQQK LVFFETQDVV ETTLALDNYR RACDCGRGAV FFSVARGKVA EGIDFDRHYG RLVVMFGVPF QYTLSKILLA RLEYLRDTFQ IKEGDFLTFD ALRQAAQCVG RVIRSKADYG MMIFADKRYS RHDKRSKLPG WILSHLRDAH LNLSTDMAIH IAREENSVNT RGFGEDG // ID M4YMZ8_9EURY Unreviewed; 625 AA. AC M4YMZ8; DT 29-MAY-2013, integrated into UniProtKB/TrEMBL. DT 29-MAY-2013, sequence version 1. DT 11-MAY-2016, entry version 19. DE SubName: Full=Rad3-related DNA helicase {ECO:0000313|EMBL:AGI47193.1}; DE EC=3.6.1.- {ECO:0000313|EMBL:AGI47193.1}; GN ORFNames=TALC_00179 {ECO:0000313|EMBL:AGI47193.1}; OS Thermoplasmatales archaeon BRNA1. OC Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales. OX NCBI_TaxID=1054217 {ECO:0000313|EMBL:AGI47193.1, ECO:0000313|Proteomes:UP000012076}; RN [1] {ECO:0000313|EMBL:AGI47193.1, ECO:0000313|Proteomes:UP000012076} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=BRNA1 {ECO:0000313|EMBL:AGI47193.1, RC ECO:0000313|Proteomes:UP000012076}; RA Denman S.E., Evans P., Bragg L., Padmanahba J., McKenzie M., RA Edwards D., Krzycki J., McSweeney C., Morrison M.; RT "Thermoplasmatales-like gut symbionts are pyrrolysine dependent- RT methanogens."; RL Submitted (JUL-2011) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002916; AGI47193.1; -; Genomic_DNA. DR RefSeq; WP_015491710.1; NC_020892.1. DR EnsemblBacteria; AGI47193; AGI47193; TALC_00179. DR GeneID; 15077484; -. DR KEGG; tar:TALC_00179; -. DR KO; K10844; -. DR Proteomes; UP000012076; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000313|EMBL:AGI47193.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000012076}; KW Helicase {ECO:0000313|EMBL:AGI47193.1}; KW Hydrolase {ECO:0000313|EMBL:AGI47193.1}; KW Nucleotide-binding {ECO:0000313|EMBL:AGI47193.1}; KW Reference proteome {ECO:0000313|Proteomes:UP000012076}. FT DOMAIN 1 271 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 625 AA; 68808 MW; 6DA42649A7DC2FF9 CRC64; MTRNGVFPYS YRPCQKAMVE FVRSGVAGDG TVVMESGTGT GKTAVSLSGA IEGRGRSARI VYLTRTKSQQ RQVALECRAI SDNIPLISVA VQGRSASTCP MMAHDRDLSD GTPEELSRLC SDLKKGDGPA GKCEYFEAMG STQVEACISY IRTAHPDPEE FAEFCGAMGV CPYEMAKKVL PYADVVSAPY PFFFIPAVRS RLMDWMGTAE KDVVAIIDEA HNLPEYLREI QTYTVTARSL ELSRSEAEAN GNPLLGSDVR ATDLVDAVRD VMDDATDEFL TRENDPIPPD YLSTKLMSRF SRSTVGIKNL FVLLHEAGMA IAEKKKAKRK LPRSHLATLA LFILGWLECD DESHVFLIAG GDNPSLEAYC LDPADAAEPL RLCRSSVSMS GTLEPLRNYA WELGLREPET ETFPSPFPPE NRRTVFVRDI STRYADLYGP GDTYGRLKDY VIGIVDAAKV NTAVFFPSYS LMERFIDDGV DFALRRDVFY ERAGSTQAEL MDQVMGFRTT PGSVLFAVTG GRISEGLDFP GREMELAVIV GIPYGRPSAK TDALIRYCQG RFGDGFGMAM KVPAVRKMRQ AIGRLIRSEN DRGIAVILDN RVPTLPGLDA EPTDDPVADV RSFFE // ID M4YPP6_9EURY Unreviewed; 655 AA. AC M4YPP6; DT 29-MAY-2013, integrated into UniProtKB/TrEMBL. DT 29-MAY-2013, sequence version 1. DT 11-MAY-2016, entry version 19. DE SubName: Full=Rad3-related DNA helicase {ECO:0000313|EMBL:AGI47783.1}; DE EC=3.6.1.- {ECO:0000313|EMBL:AGI47783.1}; GN ORFNames=TALC_00787 {ECO:0000313|EMBL:AGI47783.1}; OS Thermoplasmatales archaeon BRNA1. OC Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales. OX NCBI_TaxID=1054217 {ECO:0000313|EMBL:AGI47783.1, ECO:0000313|Proteomes:UP000012076}; RN [1] {ECO:0000313|EMBL:AGI47783.1, ECO:0000313|Proteomes:UP000012076} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=BRNA1 {ECO:0000313|EMBL:AGI47783.1, RC ECO:0000313|Proteomes:UP000012076}; RA Denman S.E., Evans P., Bragg L., Padmanahba J., McKenzie M., RA Edwards D., Krzycki J., McSweeney C., Morrison M.; RT "Thermoplasmatales-like gut symbionts are pyrrolysine dependent- RT methanogens."; RL Submitted (JUL-2011) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002916; AGI47783.1; -; Genomic_DNA. DR EnsemblBacteria; AGI47783; AGI47783; TALC_00787. DR KEGG; tar:TALC_00787; -. DR KO; K10844; -. DR Proteomes; UP000012076; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 5. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR014001; Helicase_ATP-bd. DR InterPro; IPR001650; Helicase_C. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00487; DEXDc; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. DR PROSITE; PS51194; HELICASE_CTER; 1. PE 4: Predicted; KW ATP-binding {ECO:0000313|EMBL:AGI47783.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000012076}; KW Helicase {ECO:0000313|EMBL:AGI47783.1}; KW Hydrolase {ECO:0000313|EMBL:AGI47783.1}; KW Nucleotide-binding {ECO:0000313|EMBL:AGI47783.1}; KW Reference proteome {ECO:0000313|Proteomes:UP000012076}. FT DOMAIN 21 307 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT DOMAIN 470 622 Helicase C-terminal. FT {ECO:0000259|PROSITE:PS51194}. SQ SEQUENCE 655 AA; 73082 MW; B7785A8BC2A77DB2 CRC64; MTEGGEWVAP TRAPKVVKNE NKDAPYLPYE PRELQIDIIS DIRSALDQSR HIVIESGTGT GKTIVSLAGS LEHAKRTGKK VVYITRTISQ SDQVMKELRA INTIKPVSGI TLTGRSKSCP LLMARPDFEN LSPSALSTLC SDRKQKSQQN RAGGCPYFDK TLPQIDNIER YCKKEFPRSD ELDIYCKNSG ACPYEAKKAM MKDFDVIVAP YIHMIDPAIR DNFFQNLGMD EKDIVLIVDE AHNLMDAVRE QESFTISSRL MSSALDECMA FNKPPVSSTM TLDDFVRAVR RVVKGLASKK IPLGEKEAML EPREFETALA SESGTDVTGL RSIVEKLTEL GEKRQEAIAD TDSPDSPLLD FAILLGKWVK SPEDRYIKVV RTNEEGEFIQ ASCIDPADVP AFLRKLPGAV HMSGTLQPLA QYARVMGLPD NTLPRKYPSP FPKENKKVVY ATDVTSEFKT LKENPSMQKR LDDYVIRLCN SIDGNTLVFM PSYRVLKLMQ PALEDGIDKP LYWELSGRQR QTMKNLDAFR SGRNGVFVCV MGGSIAEGMD FPGDQLCFAV IVGMPYAPPS LEIKAMKDMF DKRYGPGTGW KYTGEIPAVR KIRQAIGRLI RTETDRGMAV ILDSRAARNA RELEATPTQD PVGEAIMFFK GPRKG // ID M5ECV2_MALS4 Unreviewed; 577 AA. AC M5ECV2; DT 29-MAY-2013, integrated into UniProtKB/TrEMBL. DT 29-MAY-2013, sequence version 1. DT 11-MAY-2016, entry version 20. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CCV00720.1}; GN ORFNames=MSY001_3426 {ECO:0000313|EMBL:CCV00720.1}; OS Malassezia sympodialis (strain ATCC 42132) (Atopic eczema-associated OS yeast). OC Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; OC Malasseziomycetes; Malasseziales; Malasseziaceae; Malassezia. OX NCBI_TaxID=1230383 {ECO:0000313|EMBL:CCV00720.1, ECO:0000313|Proteomes:UP000016925}; RN [1] {ECO:0000313|Proteomes:UP000016925} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 42132 {ECO:0000313|Proteomes:UP000016925}; RX PubMed=23341551; DOI=10.1128/mBio.00572-12; RA Gioti A., Nystedt B., Li W., Xu J., Andersson A., Averette A.F., RA Muench K., Wang X., Kappauf C., Kingsbury J.M., Kraak B., Walker L.A., RA Johansson H.J., Holm T., Lehtioe J., Stajich J.E., Mieczkowski P., RA Kahmann R., Kennell J.C., Cardenas M.E., Lundeberg J., Saunders C.W., RA Boekhout T., Dawson T.L., Munro C.A., de Groot P.W.J., Butler G., RA Heitman J., Scheynius A.; RT "Genomic insights into the atopic eczema-associated skin commensal RT yeast Malassezia sympodialis."; RL MBio 4:E572-E572(2013). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00051130}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00051146}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; HE999575; CCV00720.1; -; Genomic_DNA. DR EnsemblFungi; CCV00720; CCV00720; MSY001_3426. DR Proteomes; UP000016925; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00491; HELICc2; 1. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00442371}; KW Complete proteome {ECO:0000313|Proteomes:UP000016925}; KW Helicase {ECO:0000256|SAAS:SAAS00442371}; KW Hydrolase {ECO:0000256|SAAS:SAAS00442371}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00442371}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000016925}. FT DOMAIN 1 60 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 577 AA; 65998 MW; EE5145D5AA658DD2 CRC64; MSKDAIVVFD EAHNIDNVCI ESLSIDLTRP VLDNAYRCIN QLADKVDEVK KVDAAKLQDE YLRLVEGLQQ QSDDREAESF LANPVLPDDL LQEAVPGNIR RAEHFVAFLR RFVEYLKTRM RVLHVVAETP ASFLQHLKEI TFIERKPLRF CAERLRMLVQ TLELTRVDEY SALQTVAFFA TLVSTYDKGF LLILEPFETE QATVPNPIFH FTCLDASLAI APVFERFSSV IITSGTISPL DMYPKMLRFD TVVQESYTMT LTRQCFLPLV ITRGSDQVAI SSRFEVRNDP SVVRNYGNIL IEYSRCIPDG IVAFFPSYLY MESIVAAWHD MGILDEVWKH KLVFIETPDA PETSIALENY RRACDNGRGA ILLSVARGKV SEGIDFDHNY GRAVVMFGVP YQYTESRILK ARLEFLRDNF RIKENDFLTF DAMRHAAQCV GRVLRGKSDY GLMVFADKRF ARSDKRAKLP KWIAQYIEPV FSNLSTDMAI VESKRFMRTM GQPVPEGKNG ISLWDVEDIE RRQQKEKEAF EKLMLAESDA WVEKHQQQDA SQEPHALADE FDEEFGTGAE LAQVAAP // ID M5GG19_DACSP Unreviewed; 798 AA. AC M5GG19; DT 29-MAY-2013, integrated into UniProtKB/TrEMBL. DT 29-MAY-2013, sequence version 1. DT 11-MAY-2016, entry version 24. DE SubName: Full=DNA repair helicase {ECO:0000313|EMBL:EJU04718.1}; GN ORFNames=DACRYDRAFT_62906 {ECO:0000313|EMBL:EJU04718.1}; OS Dacryopinax sp. (strain DJM 731) (Brown rot fungus). OC Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; OC Dacrymycetes; Dacrymycetales; Dacrymycetaceae; Dacryopinax. OX NCBI_TaxID=745407 {ECO:0000313|EMBL:EJU04718.1, ECO:0000313|Proteomes:UP000030653}; RN [1] {ECO:0000313|EMBL:EJU04718.1, ECO:0000313|Proteomes:UP000030653} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=DJM-731 SS1 {ECO:0000313|EMBL:EJU04718.1}; RX PubMed=22745431; DOI=10.1126/science.1221748; RA Floudas D., Binder M., Riley R., Barry K., Blanchette R.A., RA Henrissat B., Martinez A.T., Otillar R., Spatafora J.W., Yadav J.S., RA Aerts A., Benoit I., Boyd A., Carlson A., Copeland A., Coutinho P.M., RA de Vries R.P., Ferreira P., Findley K., Foster B., Gaskell J., RA Glotzer D., Gorecki P., Heitman J., Hesse C., Hori C., Igarashi K., RA Jurgens J.A., Kallen N., Kersten P., Kohler A., Kuees U., RA Kumar T.K.A., Kuo A., LaButti K., Larrondo L.F., Lindquist E., RA Ling A., Lombard V., Lucas S., Lundell T., Martin R., McLaughlin D.J., RA Morgenstern I., Morin E., Murat C., Nagy L.G., Nolan M., Ohm R.A., RA Patyshakuliyeva A., Rokas A., Ruiz-Duenas F.J., Sabat G., Salamov A., RA Samejima M., Schmutz J., Slot J.C., St John F., Stenlid J., Sun H., RA Sun S., Syed K., Tsang A., Wiebenga A., Young D., Pisabarro A., RA Eastwood D.C., Martin F., Cullen D., Grigoriev I.V., Hibbett D.S.; RT "The Paleozoic origin of enzymatic lignin decomposition reconstructed RT from 31 fungal genomes."; RL Science 336:1715-1719(2012). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; JH795857; EJU04718.1; -; Genomic_DNA. DR EnsemblFungi; EJU04718; EJU04718; DACRYDRAFT_62906. DR Proteomes; UP000030653; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EJU04718.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000030653}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EJU04718.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EJU04718.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EJU04718.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000030653}. FT DOMAIN 7 291 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 798 AA; 91255 MW; EFAF07D0E34079BC CRC64; MKFNIDGLPI IFPYDRIYPE QYSYMCDLKK TLDAQGHGVL EMPSGTGKTV SLLSLIVSYQ QHSPHPRKLI YCSRTVPEIE KALSELQRLM KYRVSQAETP EERMKEESFI GLGLTSRKNL CLHPDVSKEK KGKVVDARCR DLTNSAACEK GRANPGSVPL CDWHERLGEK EPGNLIPPGI YTLAEVLQYG RDEGVCPYFT IRRMMPFVDV IIYSFHYLLD PKVAEQVSKE FSKDAIVVFD EAHNIDNVCI ESLSIDLTRP MLDSATRSVV RLTEKIEEIK ETDASKLQDE YAKLVEGLQE ANNETSDEDA FVANAVLPDD LLKEAIPGNI RKAEHFIAFL KRFVEYLKTR MRVLHVVAET PLSFLQHLKD ITYIERRPLR FCAERLQSLV RTLELNQLDE YFALQKVASF ATLVATYEKG FLLILEPFET ETATVPNPIF HFTCLDPSLA IKPIFERFSS VVITSGTISP LDMYPKMLQF TPVIQESYPM TLTRNCFLPL VITRGSDQVA VSSRFEVRND PAVVRNFGSI LIEYSKIVPD GIVAFFPSYL YMESIVAAWN DMGILNEVWK NKLIFVETPD ANETSIALEN YRRACNNGRG AVMLSVARGK VSEGIDFDHN YGRAVIMFGV PYQYTQSRIL RARLEYLRDA YRIRESEFLA FDAMRNAAQC VGRVLRGKTD WGLMVFADKR YARADKRAKL PRWMNQYISE TASNLSTDMA IVLSKLFMRQ ISQNPNENQT GISLWTLEHI EQRQAAEREM TAQMQVDEKR EMRPDREGSA TSEDEFIESW RSSETMNC // ID M7PKS6_PNEMU Unreviewed; 778 AA. AC M7PKS6; DT 29-MAY-2013, integrated into UniProtKB/TrEMBL. DT 29-MAY-2013, sequence version 1. DT 11-MAY-2016, entry version 19. DE SubName: Full=DNA repair helicase rad15 {ECO:0000313|EMBL:EMR11069.1}; GN ORFNames=PNEG_00666 {ECO:0000313|EMBL:EMR11069.1}; OS Pneumocystis murina (strain B123) (Pneumocystis carinii f. sp. muris). OC Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; OC Pneumocystidomycetes; Pneumocystidaceae; Pneumocystis. OX NCBI_TaxID=1069680 {ECO:0000313|EMBL:EMR11069.1, ECO:0000313|Proteomes:UP000011958}; RN [1] {ECO:0000313|EMBL:EMR11069.1, ECO:0000313|Proteomes:UP000011958} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=B123 {ECO:0000313|EMBL:EMR11069.1, RC ECO:0000313|Proteomes:UP000011958}; RA Rovira Torres L.; RL Submitted (JAN-2013) to the EMBL/GenBank/DDBJ databases. RN [2] {ECO:0000313|EMBL:EMR11069.1, ECO:0000313|Proteomes:UP000011958} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=B123 {ECO:0000313|EMBL:EMR11069.1, RC ECO:0000313|Proteomes:UP000011958}; RG The Broad Institute Genomics Platform; RA Cuomo C.A., Ma L., Huang D.W., Kutty G., Bishop L., Fantoni G., RA Sherman B.T., Jiao X., Hu X., Yang J., Jones K., Raley C., RA Stephens R., Lempicki R.A., Kovacs J.A., Chen Z., Abouelleil A., RA Goldberg J., Priest M., Saif S., Sykes S., Young S., Zeng Q., RA Wortman J., Nusbaum C., Birren B., Gabriel S., Lander E.; RT "Mechanisms of Adaptation to a Mammalian Host Environment by RT Pneumocystis, an Opportunistic Pathogen of Immunosuppressed RT Patients."; RL Submitted (JUN-2015) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:EMR11069.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AFWA02000002; EMR11069.1; -; Genomic_DNA. DR RefSeq; XP_007872566.1; XM_007874375.1. DR EnsemblFungi; EMR11069; EMR11069; PNEG_00666. DR GeneID; 19894364; -. DR Proteomes; UP000011958; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EMR11069.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000011958}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EMR11069.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EMR11069.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EMR11069.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000011958}. FT DOMAIN 7 289 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 248 297 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 778 AA; 90111 MW; D3E9AD86E5FD155D CRC64; MKFFIDDLPV LFPYPRIYPE QYSYMCHLKK TLDIGGHCVL EMPSGTGKTI SLLSLIISYQ KFYPEHRKLI YCSRTMSEIE KVLVELKSLM EFRKNVLGEN DKFRALGLTS RKNLCLHSSV KQEKKGTIVD ARCRNLTASF VKERRKKGEN VNFCVYYENL EFLESHDLIP YGVFTFSDLL KYGEVNKQCP YFTARRAIPI CNVVVYSYHY LLDPKISEYI SKELSKDCII VFDEAHNIDN VCIESLSVDI TENSLKKVSN SINNLEKKII DMKKNNSEKL QMEYKKLVED LKKIDEEREE DVFISNPILP DDLLKEAVPG NIRKAEHFIA FLKRFVEYMK TRMKVLHVVA ETPLSFLQHL KELTYIERKP LRFCTERLNS LIRTLELPNI EDYQYLQEIA NFATLVSTYE KGFILILEPY ETDTAAVPNP VFHFACLDAS IAIKPVFNKF KTVIITSGTI SPLDMYPKIL QFNAVIQESY SISLARNSFL PMIVTRGSNQ VAISSKFEVR NDPSIICNYG DILIEFSKIT PDGLVAFFPS YLYMESIISQ WHTLGILDEI WKYKLILVET PDSQETVLAL KTYRTACDNG RGAVLLCVAR GKISEGIDFD HHYGRTVIMF GIPYQYTKSR ILKARLEFLR DMYHIKENDF LTFDAMRHAA QCLGRVLRGK DDYGVMVLAD KRFSRADKRN KLPKWIQEYI TGGTSNLSTD MSLAFAEKFL KAMAQPFNIK DQEGISWWDI NKLHEYQEKE KIQLQSENNK NLMDINDNIS DEIIENIA // ID M7SV79_EUTLA Unreviewed; 804 AA. AC M7SV79; DT 29-MAY-2013, integrated into UniProtKB/TrEMBL. DT 29-MAY-2013, sequence version 1. DT 11-MAY-2016, entry version 22. DE SubName: Full=Putative dna repair helicase rad15 protein {ECO:0000313|EMBL:EMR61496.1}; GN ORFNames=UCREL1_11571 {ECO:0000313|EMBL:EMR61496.1}; OS Eutypa lata (strain UCR-EL1) (Grapevine dieback disease fungus) OS (Eutypa armeniacae). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; OC Sordariomycetes; Xylariomycetidae; Xylariales; Diatrypaceae; Eutypa. OX NCBI_TaxID=1287681 {ECO:0000313|EMBL:EMR61496.1, ECO:0000313|Proteomes:UP000012174}; RN [1] {ECO:0000313|Proteomes:UP000012174} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=UCR-EL1 {ECO:0000313|Proteomes:UP000012174}; RX PubMed=23723393; DOI=10.1128/genomeA.00228-13; RA Blanco-Ulate B., Rolshausen P.E., Cantu D.; RT "Draft genome sequence of the grapevine dieback fungus Eutypa lata RT UCR-EL1."; RL Genome Announc. 1:E0022813-E0022813(2013). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; KB707605; EMR61496.1; -; Genomic_DNA. DR RefSeq; XP_007799407.1; XM_007801216.1. DR EnsemblFungi; EMR61496; EMR61496; UCREL1_11571. DR GeneID; 19225114; -. DR KEGG; ela:UCREL1_11571; -. DR KO; K10844; -. DR Proteomes; UP000012174; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EMR61496.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000012174}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EMR61496.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EMR61496.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EMR61496.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000012174}. FT DOMAIN 7 295 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 255 300 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 804 AA; 91933 MW; FBA88FF66C2685CE CRC64; MKFFIDDLPV LFPYPRIYPE QYDYMCDLKR TLDAGGHCVL EMPSGTGKTV SLLSLIVAYQ QHNPKHPKLI YCSRTMSEIE KALAELKALM KFRADELGHA EEFRGLGLTS RKNLCLHPSV KREKSGSIVD SRCRSLTAGF VREKKDKGES VDTCIYHDNL DLLEPHNLVP NGVWTLDDLL RYGEQHKQCP YFTARRMMQY CNVIIYSYHY LLDPKIAERV SKEFPNDSII VFDEAHNIDN VCIESLSTDI TEDSLRKATR GAQNLERKIT DMKETDREQL ENEYQKLVEG LRDAEEARRE DAFMANPALP DDLLKEAVPG NIRRAEHFTA FLKRFIEYLK TRMKVRQVIS ETPPSFLAHL KEHTFIEKKP LRFCAERLTS LVRTLELTNI EDYQPLQEVA TFATLVATYE KGFLLILEPF ESDTAEVPNP VLHFTCLDAA IAIKPVFDRF SSVIITSGTI SPLEMYPKML DFTTVVQESY AMTLARRSFL PMIITRGSDQ APVSTSFQVR NEPSVVRNYG NLLTEFARIT PDGMVVFFPS YLYMESIISM WQGMGILDEV WKYKLILVET PDAQETSLAL ETYRTACCNG RGAVLLCVAR GKVSEGIDFD HQYGRTVLCI GVPFQYTESR ILKARLEFLR ETYRIRENDF LSFDAMRHAA QCLGRVLRGK DDYGIMVLAD RRFQRKKAQL PRWIAGAMLE VDSNLSTDMG VIAAKRFLRD MARPFKQKDQ EGVSVWSLED LRAHQKKRDE VRIRELQQSS DEAAVEAVRR AQQLKEAGGG GGGGGMDDDY DMDEEELEGM MEIG // ID M7TLV2_BOTF1 Unreviewed; 722 AA. AC M7TLV2; DT 29-MAY-2013, integrated into UniProtKB/TrEMBL. DT 29-MAY-2013, sequence version 1. DT 11-MAY-2016, entry version 21. DE SubName: Full=Putative dna repair helicase rad3 protein {ECO:0000313|EMBL:EMR82380.1}; GN ORFNames=BcDW1_8979 {ECO:0000313|EMBL:EMR82380.1}; OS Botryotinia fuckeliana (strain BcDW1) (Noble rot fungus) (Botrytis OS cinerea). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; OC Helotiales; Sclerotiniaceae; Botrytis. OX NCBI_TaxID=1290391 {ECO:0000313|EMBL:EMR82380.1, ECO:0000313|Proteomes:UP000012045}; RN [1] {ECO:0000313|Proteomes:UP000012045} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=BcDW1 {ECO:0000313|Proteomes:UP000012045}; RX PubMed=23704180; DOI=10.1128/genomeA.00252-13; RA Blanco-Ulate B., Allen G., Powell A.L., Cantu D.; RT "Draft genome sequence of Botrytis cinerea BcDW1, inoculum for noble RT rot of grape berries."; RL Genome Announc. 1:E0025213-E0025213(2013). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; KB708039; EMR82380.1; -; Genomic_DNA. DR EnsemblFungi; EMR82380; EMR82380; BcDW1_8979. DR Proteomes; UP000012045; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EMR82380.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000012045}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EMR82380.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EMR82380.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EMR82380.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000012045}. FT DOMAIN 1 209 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 722 AA; 82307 MW; 3AF12B4B1EB05977 CRC64; MSEIEKALAE LKALMKYRAE QLGHQEDFRG LGLTSRKNLC LHPSVKREKS GAVVDARCRS LTAGFVKEKK ERGEDVPVCI YHDNLDLLEP HNLIPNGVWT LDGIMRYGEE HKQCPYFTSR RMMSFCNVII YSYHYLLDPK IAERVSKELS KDCIVVFDEA HNIDNVCIES LSTDITDDSL RRATRGAMNL ESRISDLRDS DSEKLKDEYA KLVEGLRGAD EARAEDAFMS NPALPDDLLK EAVPGNIRRA EHFVVFLKRF IEYLKTRMKV RQVISETPAS FLAHLKEYTY IEKKPLRFCA ERLTSLVRTL ELTNIEDYQP LQEVATFATL VATYEKGFLL ILEPYESDTA EVPNPVLHFT CLDAAIAIKP VFERFSSVII TSGTISPLEM YPKMLNFECV VQESYPMTLA RRSFLPMIVT RGSDQVAISS GFQVRNEPAV VRNYGNLLTE MSKLTPDGMV VFFPSYLYME SIISMWQGMG ILDEVWKYKL ILVETPDAQE TSLALETYRT ACCNGRGAIL LCVARGKVSE GIDFDHQYGR TVLCIGVPFQ YTESRILKAR LEFLRETYRI RENDFLSFDA MRHAAQCLGR VLRGKDDYGI MVLADRRFLK KRTQLPKWIN QAILDSEVNL STDMAVGSAK KFLRNMAQPF KAKDQEGIST WSLQDLEKFK EKQYEETLQA LRGGGKGDPM DGIKNGNEQT VKEDEYGMDD DEMEASLMQL DA // ID M7WZS1_RHOT1 Unreviewed; 880 AA. AC M7WZS1; DT 29-MAY-2013, integrated into UniProtKB/TrEMBL. DT 29-MAY-2013, sequence version 1. DT 11-MAY-2016, entry version 21. DE SubName: Full=DNA excision repair protein ERCC-2 {ECO:0000313|EMBL:EMS23325.1}; GN ORFNames=RHTO_07667 {ECO:0000313|EMBL:EMS23325.1}; OS Rhodosporidium toruloides (strain NP11) (Yeast) (Rhodotorula OS gracilis). OC Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; OC Microbotryomycetes; Sporidiobolales; Sporidiobolaceae; Rhodotorula. OX NCBI_TaxID=1130832 {ECO:0000313|EMBL:EMS23325.1, ECO:0000313|Proteomes:UP000016926}; RN [1] {ECO:0000313|EMBL:EMS23325.1, ECO:0000313|Proteomes:UP000016926} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=NP11 {ECO:0000313|EMBL:EMS23325.1, RC ECO:0000313|Proteomes:UP000016926}; RX PubMed=23047670; DOI=10.1038/ncomms2112; RA Zhu Z., Zhang S., Liu H., Shen H., Lin X., Yang F., Zhou Y.J., Jin G., RA Ye M., Zou H., Zou H., Zhao Z.K.; RT "A multi-omic map of the lipid-producing yeast Rhodosporidium RT toruloides."; RL Nat. Commun. 3:1112-1112(2012). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; KB722648; EMS23325.1; -; Genomic_DNA. DR EnsemblFungi; EMS23325; EMS23325; RHTO_07667. DR Proteomes; UP000016926; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000016926}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000016926}. FT DOMAIN 7 290 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 880 AA; 99682 MW; B0A4E59787EF624C CRC64; MKFMLDDMEF VFPYDKMYPE QYNYVCDLKR SLDAHGHCVL EMPSGTGKTV SLLSLIVAYQ YHERKMGRPE RKLIYCSRTV PEIEKALAEL KRLMQYRKEV YHIDDGDFLG IGLSSRKNLC IHPSVRQEKK GKAVDARCRD MTSSVAKQRW EQDPTSVELC EFHENLGELD PDHLIPYGVH TIEDMKAYGQ QHKICPYFAI RRMFVHAHVV IYSFHYLLDP KVAEQVSKHM SKDSIVVFDE AHNIDNVCIE SLSIDLTRPM LDTAARSVET LTQKIEEIKE KDASKLEDEY RRLVEGLQAG ENAVEDEDFM ANPVLPQDLL QEAVPGNIRR AEHFTAFLAR FVEYLKTRMR VLHVVAETPL SFLQHLRDIT FIERKPLKFC SERLSSLVRT LELTRIDEYS ALQKVAAFAT LVATYHEGFR LLLEPFETDN ATVPNPVFHL VCLDASLAIA PVFERFSSVV ITSGTLSPLD MYPKMLRFDA TVLESYVMTL TRDCFLPLVV TRGSDQVEIS SRFEVRNDPA VVRNFGTLLV EFCKAVPDGV VAFFPSYLYM ESIVSAWNEM GILNEVLKYK LIFIETPDAV ETSAALENYR RACDNGRGAV LLSVARGKVS EGIDFDHNYG RAVIMFGIPY QYTESRILKA RLEFLRDTYR IRENDFLTFD AMRHAAQCVG RVLRGKTDYG LMIFADKRFA KVDKRNKLPK WIGQYIKESD TNLATDVAIA HSKRFLRMMA QPFEQSTKSL WGIDEIMDKQ RGLDPEGGVE EDGAMLDAEA EAAARAEAEA AAAAEAEAEG LEPLNMNGLN GGEKVNGTNG LDGDAQMYDP EGDPYGEIDD AALAEMDLPQ DLVGFGLPQP PDEFQLPQPP QEFEMGDAQT GLPQPPPEFL // ID M7ZA39_TRIUA Unreviewed; 770 AA. AC M7ZA39; DT 29-MAY-2013, integrated into UniProtKB/TrEMBL. DT 29-MAY-2013, sequence version 1. DT 11-MAY-2016, entry version 28. DE SubName: Full=DNA repair helicase UVH6 {ECO:0000313|EMBL:EMS60043.1}; DE SubName: Full=Uncharacterized protein {ECO:0000313|EnsemblPlants:TRIUR3_25030-P1}; GN ORFNames=TRIUR3_25030 {ECO:0000313|EMBL:EMS60043.1}; OS Triticum urartu (Red wild einkorn) (Crithodium urartu). OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; OC Pooideae; Triticodae; Triticeae; Triticinae; Triticum. OX NCBI_TaxID=4572 {ECO:0000313|EMBL:EMS60043.1}; RN [1] {ECO:0000313|EMBL:EMS60043.1, ECO:0000313|EnsemblPlants:TRIUR3_25030-P1, ECO:0000313|Proteomes:UP000015106} RP NUCLEOTIDE SEQUENCE. RC STRAIN=cv. G1812 {ECO:0000313|EnsemblPlants:TRIUR3_25030-P1}; RX PubMed=23535596; DOI=10.1038/nature11997; RA Ling H.Q., Zhao S., Liu D., Wang J., Sun H., Zhang C., Fan H., Li D., RA Dong L., Tao Y., Gao C., Wu H., Li Y., Cui Y., Guo X., Zheng S., RA Wang B., Yu K., Liang Q., Yang W., Lou X., Chen J., Feng M., Jian J., RA Zhang X., Luo G., Jiang Y., Liu J., Wang Z., Sha Y., Zhang B., Wu H., RA Tang D., Shen Q., Xue P., Zou S., Wang X., Liu X., Wang F., Yang Y., RA An X., Dong Z., Zhang K., Zhang X., Luo M.C., Dvorak J., Tong Y., RA Wang J., Yang H., Li Z., Wang D., Zhang A., Wang J.; RT "Draft genome of the wheat A-genome progenitor Triticum urartu."; RL Nature 496:87-90(2013). RN [2] {ECO:0000313|EnsemblPlants:TRIUR3_25030-P1} RP IDENTIFICATION. RG EnsemblPlants; RL Submitted (JUN-2015) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; KD114019; EMS60043.1; -; Genomic_DNA. DR EnsemblPlants; TRIUR3_25030-T1; TRIUR3_25030-P1; TRIUR3_25030. DR Gramene; TRIUR3_25030-T1; TRIUR3_25030-P1; TRIUR3_25030. DR OMA; DEVWKYK; -. DR Proteomes; UP000015106; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0000724; P:double-strand break repair via homologous recombination; IEA:EnsemblPlants. DR GO; GO:0010286; P:heat acclimation; IEA:EnsemblPlants. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR GO; GO:0045893; P:positive regulation of transcription, DNA-templated; IEA:EnsemblPlants. DR GO; GO:0043687; P:post-translational protein modification; IEA:EnsemblPlants. DR GO; GO:0006457; P:protein folding; IEA:EnsemblPlants. DR GO; GO:0009644; P:response to high light intensity; IEA:EnsemblPlants. DR GO; GO:0042542; P:response to hydrogen peroxide; IEA:EnsemblPlants. DR GO; GO:0010212; P:response to ionizing radiation; IEA:EnsemblPlants. DR GO; GO:0009411; P:response to UV; IEA:EnsemblPlants. DR GO; GO:0000394; P:RNA splicing, via endonucleolytic cleavage and ligation; IEA:EnsemblPlants. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:EnsemblPlants. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 5. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EMS60043.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000015106}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EMS60043.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EMS60043.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EMS60043.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000015106}. FT DOMAIN 7 283 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 770 AA; 86901 MW; 124D33DC40FA841E CRC64; MKFDLEGLTV HFPYAAIYPE QHAYMGELKR ALDARGHALL EMPTGTGKTA ALISLITSYS LANPSRPLRL LYCTRTVHEM EKTLAELRLL FSHLPPAASR SLLALGLSSR KNLCVPPQAS APAARDSVDT ACRRLTASWV REKAASDPES TPLCEYFESF DRAAAAGDLA SFMPPGVYTL ADLRSLGRER RICPYFLARQ MVKYANVVVY SYQYLLDPKV ASIVSREMQK ECVVVFDEAH NIDNVCIEAL SVSVRKQTLE GRFKATDANR LRAEYNRLVD GLAQRGNLPI SDAWLANPSL PDDILKEAVP GNIRKAEHFL AVLKRLVRFL DGRLETENVE NEMPVSFVAS IHSQAGIDQR MLRFCYDRLH SLLLTLEITD TDEFMHIQTI CDFATLIGTY SRGFSIIIEP YDDRMPEVRD PVIQLSCHDA SLAIQPVFDR FQTVVITSGT LSPIDLYPRL LNFNPVISRS FTMSLTRDCI CPMVLTRGSD QLPVSTKFDM RSDPGVVRNY GRLLLEMASS VPDGIVCFFV SYSYMDGIVN SWNEMGILQF PHVAKIHINV LVPKECPSYD VIVQDIMQHK LVFIETPDVV ETTLALDNYR KACDCGRGAI FFSVARGKVA EGIDFDRHYG RLVIMFGVPF QYTLSKILRA RLEYLRETFQ IKEGDFLTFD ALRQAAQCVG RVIRSKADYG MMIFADKRYS RHDKRSKLPG WILSHLHDAH LNLSTDMALH TAREFLRRMA QPYDKAGSGG KKTLLTEEDL QDMARDAMEM // ID M9LRN5_PSEA3 Unreviewed; 851 AA. AC M9LRN5; DT 29-MAY-2013, integrated into UniProtKB/TrEMBL. DT 29-MAY-2013, sequence version 1. DT 11-MAY-2016, entry version 19. DE SubName: Full=RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, 5'-3' helicase subunit RAD3 {ECO:0000313|EMBL:GAC75831.1}; GN ORFNames=PANT_18c00081 {ECO:0000313|EMBL:GAC75831.1}; OS Pseudozyma antarctica (strain T-34) (Yeast) (Candida antarctica). OC Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; OC Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Moesziomyces. OX NCBI_TaxID=1151754 {ECO:0000313|EMBL:GAC75831.1, ECO:0000313|Proteomes:UP000011976}; RN [1] {ECO:0000313|Proteomes:UP000011976} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=T-34 {ECO:0000313|Proteomes:UP000011976}; RX PubMed=23558529; DOI=10.1128/genomeA.00064-13; RA Morita T., Koike H., Koyama Y., Hagiwara H., Ito E., Fukuoka T., RA Imura T., Machida M., Kitamoto D.; RT "Genome sequence of the basidiomycetous yeast Pseudozyma antarctica T- RT 34, a producer of the glycolipid biosurfactants mannosylerythritol RT lipids."; RL Genome Announc. 1:E0006413-E0006413(2013). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; DF196784; GAC75831.1; -; Genomic_DNA. DR Proteomes; UP000011976; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:GAC75831.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000011976}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:GAC75831.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:GAC75831.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:GAC75831.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000011976}. FT DOMAIN 7 319 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 851 AA; 96670 MW; 21C2E2EE756C1C76 CRC64; MKFYIDELPV LFPYPKIYPE QYAYMTDLKR TLDANGHCVL EMPSGTGKTV SLFSLIVSYQ LFHPAKRKLI YCSRTVPEIE KALAELKRLM EYRARYNVPE GEESHVAKSD ADGTNGPADD DIEMKGRGKA GGQMEDILAL GLSSRKNLCI HPDVGRERKG KVVDARCRDM TSSWACEKGR QDPGSVQLCD FHEELGKMEP GQLIPQGVWT LEEVKEYARV KGICPYFAIR RMIPFVDIIV YSFHYLLDPK IAEQVSKEMS KDAIVVFDEA HNIDNVCIES LSIDLTRPML DSAYRSINQL SERVDEIKRT DASKLQDEYA RLVEGLQEQG EQREAESFMA NPVLPDDLLQ EAVPGNIRRA EHFVAFLKRF VEYLKTRMRV LHVVAETPAS FLQHLKDITY IERKPLRFCA ERLRMLVGTL ELTRLDEYSA LQKVAAFATL VATYDKGFLL ILEPFETENA TVPNPIFHFT CLDASLAIAP VFERFSSVII TSGTISPLDM YPKMLKFDAI VQESYAMTLT RQCFLPLVIT RGSDQVAISS RFEVRNDPAV VRNYGSILIE YAKCVPDGIV AFFPSYLYME SIVAAWHDMG ILDEVWKYKL IFIETPDAPE TSIALENYRR ACDNGRGAIL LSVARGKVSE GIDFDHNYGR AVIMFGVPYQ YTESRILKAR LEFLRDNFRI RENDFLTFDA MRHAAQCVGR VLRGKTDYGL MVFADKRFAR ADKRNKLPKW IAQYIKETHS NLSTDMAIVE SKLFIRSMAQ PYPEGKNGVS LWELADIETR QAKERETFAK LMGGQLKVDA NGEVVDRDDS DSDMELAATK KDDDDDDFDA EFGGGDDLAH IEELDDPMMA A // ID M9SFD4_9EURY Unreviewed; 626 AA. AC M9SFD4; DT 26-JUN-2013, integrated into UniProtKB/TrEMBL. DT 26-JUN-2013, sequence version 1. DT 11-MAY-2016, entry version 17. DE SubName: Full=DNA repair helicase Rad3 {ECO:0000313|EMBL:AGI84923.1}; GN ORFNames=MMALV_01670 {ECO:0000313|EMBL:AGI84923.1}; OS Candidatus Methanomethylophilus alvus Mx1201. OC Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; OC Methanomassiliicoccaceae; Candidatus Methanomethylophilus. OX NCBI_TaxID=1236689 {ECO:0000313|EMBL:AGI84923.1, ECO:0000313|Proteomes:UP000012672}; RN [1] {ECO:0000313|EMBL:AGI84923.1, ECO:0000313|Proteomes:UP000012672} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Mx1201 {ECO:0000313|EMBL:AGI84923.1}; RX PubMed=23209209; DOI=10.1128/JB.01867-12; RA Borrel G., Harris H.M., Tottey W., Mihajlovski A., Parisot N., RA Peyretaillade E., Peyret P., Gribaldo S., O'Toole P.W., Brugere J.F.; RT "Genome sequence of "Candidatus Methanomethylophilus alvus" Mx1201, a RT methanogenic archaeon from the human gut belonging to a seventh order RT of methanogens."; RL J. Bacteriol. 194:6944-6945(2012). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP004049; AGI84923.1; -; Genomic_DNA. DR RefSeq; WP_015504072.1; NC_020913.1. DR EnsemblBacteria; AGI84923; AGI84923; MMALV_01670. DR GeneID; 15138990; -. DR KEGG; max:MMALV_01670; -. DR KO; K10844; -. DR Proteomes; UP000012672; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR014001; Helicase_ATP-bd. DR InterPro; IPR001650; Helicase_C. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00487; DEXDc; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. DR PROSITE; PS51194; HELICASE_CTER; 1. PE 4: Predicted; KW ATP-binding {ECO:0000313|EMBL:AGI84923.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000012672}; KW Helicase {ECO:0000313|EMBL:AGI84923.1}; KW Hydrolase {ECO:0000313|EMBL:AGI84923.1}; KW Nucleotide-binding {ECO:0000313|EMBL:AGI84923.1}; KW Reference proteome {ECO:0000313|Proteomes:UP000012672}. FT DOMAIN 1 270 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT DOMAIN 445 626 Helicase C-terminal. FT {ECO:0000259|PROSITE:PS51194}. SQ SEQUENCE 626 AA; 68917 MW; A45C74A024B9D8B4 CRC64; MNDLFPYPLR PGQDGIIRLI RDSVRGGRCV VLESGTGTGK TSVSLAGALE GISGTARKVV FLTRTKSQQK QVAVEARAIG ARTDVICIAV QGRGPATCPM MLSDRDLSDG TSEELSKLCA ELKKGTGPAG KCSYFENIGS TEVEACISFI RARHPDPEEF RDFCAARGIC PYETVKKLLP YANVVSAPYA FFFIPAIKNH FLQWMGVSDR EVVVIVDEAH NLPSYLRDSM TCRCTARSLD LADSEADRNG NPLLVQDISC KDIVQLMRDI MADAQKEYLR RESDMIPPDY LGEEMMVRLG MTSAGVRDLV MRLAEVGISI EESKKAKRKL PRSHLSSLAG FICAWMSFDS YSHVFLVSGG DNPYLEAYCL DPGEAAEPLS TCLSSVSMSG TLSPLKDYAG EMGLEDPVSE VFPSPFPKEN LEVFYVNDVS TKFSEINSDD GTYDRLKRYV VDIVGASDRS TAVFFPSYGV MERFVEDKVP DALGREVYFE RRGMPQSELM EQISDFLGKE GSVLFAVTGG RVSEGLDFPG RQLELAVIVG IPFAHPSAKQ DALIGYCQNR FGNGWDMAVR VPAVRKMRQA IGRLIRSEGD RGMAVILDRR VASLDGLDAK LTSDPVAEVR RFFQSH // ID M9SHG1_9EURY Unreviewed; 631 AA. AC M9SHG1; DT 26-JUN-2013, integrated into UniProtKB/TrEMBL. DT 22-JAN-2014, sequence version 2. DT 11-MAY-2016, entry version 17. DE SubName: Full=DNA repair helicase Rad3 related protein {ECO:0000313|EMBL:AGI85593.2}; GN ORFNames=MMALV_08560 {ECO:0000313|EMBL:AGI85593.2}; OS Candidatus Methanomethylophilus alvus Mx1201. OC Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; OC Methanomassiliicoccaceae; Candidatus Methanomethylophilus. OX NCBI_TaxID=1236689 {ECO:0000313|EMBL:AGI85593.2, ECO:0000313|Proteomes:UP000012672}; RN [1] {ECO:0000313|EMBL:AGI85593.2, ECO:0000313|Proteomes:UP000012672} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Mx1201 {ECO:0000313|EMBL:AGI85593.2}; RX PubMed=23209209; DOI=10.1128/JB.01867-12; RA Borrel G., Harris H.M., Tottey W., Mihajlovski A., Parisot N., RA Peyretaillade E., Peyret P., Gribaldo S., O'Toole P.W., Brugere J.F.; RT "Genome sequence of "Candidatus Methanomethylophilus alvus" Mx1201, a RT methanogenic archaeon from the human gut belonging to a seventh order RT of methanogens."; RL J. Bacteriol. 194:6944-6945(2012). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP004049; AGI85593.2; -; Genomic_DNA. DR EnsemblBacteria; AGI85593; AGI85593; MMALV_08560. DR KEGG; max:MMALV_08560; -. DR KO; K10844; -. DR Proteomes; UP000012672; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 5. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR014001; Helicase_ATP-bd. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00487; DEXDc; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 2. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000313|EMBL:AGI85593.2}; KW Complete proteome {ECO:0000313|Proteomes:UP000012672}; KW Helicase {ECO:0000313|EMBL:AGI85593.2}; KW Hydrolase {ECO:0000313|EMBL:AGI85593.2}; KW Nucleotide-binding {ECO:0000313|EMBL:AGI85593.2}; KW Reference proteome {ECO:0000313|Proteomes:UP000012672}. FT DOMAIN 1 279 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 631 AA; 70695 MW; 73763D01F868137E CRC64; MKAPYLPYEP RPSQLQIISD IRTALDQSRH IVIESGTGTG KTITSLAGAL EHAKPRGKKV VYITRTISQS DQVMKELRAI STLKPVYGIT LTGRNKSCPL LQARPDFESL SPSALSTLCS DRKAKSQQNR PGGCPFFEET QHNLETVEAY CKKNFPKSDE LDVYCRNINV CPYEAKKALM KDFDVVVAPY IHIIDPDIRE NFLSNLDTDE KGIVLIVDEA HNIMDAVREQ ESFSITTRLV MSALDEAGLF KKPEVCDGVT IDAFIRSVRA AMRDIGSKYL GFNEKEKVIP ADSLENSVCT ALNIDRMQLT AAINRTIELG EKREEAIADT DAPSSPVLEF GRLMEAWVKS PADRYVRAVR SNEDGEYLTA SCIDPTDIVR FMNALPGAVH MSGTLQPLAQ YARVMGLPSN SVPRTYPSPF PAENKLVVYA KDVTTNYNDL KANPSMWSKI ERMTAQMCNA VDKNILVFLP SYRLMKDIRP YMEQSVDKPL YWEESGRQRN TMRSLEAFRR GRNGVFFCVM GGSVAEGMDF PGEELCFAII IGMPYPPPTI EMKAMKDMFD ARYGSGMGWK YTSEIPAVRK IRQAIGRLIR TETDRGMAVI LDNRASRNAR QLEAVPSDDP VSDAVRFFSK K // ID N1JH87_BLUG1 Unreviewed; 694 AA. AC N1JH87; DT 26-JUN-2013, integrated into UniProtKB/TrEMBL. DT 26-JUN-2013, sequence version 1. DT 11-MAY-2016, entry version 22. DE SubName: Full=DNA repair helicase RAD3 {ECO:0000313|EMBL:CCU82239.1}; GN ORFNames=BGHDH14_bgh05815 {ECO:0000313|EMBL:CCU82239.1}; OS Blumeria graminis f. sp. hordei (strain DH14) (Barley powdery mildew) OS (Oidium monilioides f. sp. hordei). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; OC Erysiphales; Erysiphaceae; Blumeria. OX NCBI_TaxID=546991 {ECO:0000313|EMBL:CCU82239.1, ECO:0000313|Proteomes:UP000015441}; RN [1] {ECO:0000313|EMBL:CCU82239.1, ECO:0000313|Proteomes:UP000015441} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=DH14 {ECO:0000313|EMBL:CCU82239.1}; RX PubMed=21148392; DOI=10.1126/science.1194573; RA Spanu P.D., Abbott J.C., Amselem J., Burgis T.A., Soanes D.M., RA Stueber K., Ver Loren van Themaat E., Brown J.K.M., Butcher S.A., RA Gurr S.J., Lebrun M.-H., Ridout C.J., Schulze-Lefert P., Talbot N.J., RA Ahmadinejad N., Ametz C., Barton G.R., Benjdia M., Bidzinski P., RA Bindschedler L.V., Both M., Brewer M.T., Cadle-Davidson L., RA Cadle-Davidson M.M., Collemare J., Cramer R., Frenkel O., Godfrey D., RA Harriman J., Hoede C., King B.C., Klages S., Kleemann J., Knoll D., RA Koti P.S., Kreplak J., Lopez-Ruiz F.J., Lu X., Maekawa T., Mahanil S., RA Micali C., Milgroom M.G., Montana G., Noir S., O'Connell R.J., RA Oberhaensli S., Parlange F., Pedersen C., Quesneville H., RA Reinhardt R., Rott M., Sacristan S., Schmidt S.M., Schoen M., RA Skamnioti P., Sommer H., Stephens A., Takahara H., RA Thordal-Christensen H., Vigouroux M., Wessling R., Wicker T., RA Panstruga R.; RT "Genome expansion and gene loss in powdery mildew fungi reveal RT tradeoffs in extreme parasitism."; RL Science 330:1543-1546(2010). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:CCU82239.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CAUH01006046; CCU82239.1; -; Genomic_DNA. DR EnsemblFungi; CCU82239; CCU82239; BGHDH14_bgh05815. DR Proteomes; UP000015441; Unassembled WGS sequence. DR GO; GO:0000439; C:core TFIIH complex; IEA:EnsemblFungi. DR GO; GO:0005675; C:holo TFIIH complex; IEA:EnsemblFungi. DR GO; GO:0000112; C:nucleotide-excision repair factor 3 complex; IEA:EnsemblFungi. DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:EnsemblFungi. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0043141; F:ATP-dependent 5'-3' DNA helicase activity; IEA:EnsemblFungi. DR GO; GO:0003684; F:damaged DNA binding; IEA:EnsemblFungi. DR GO; GO:0033683; P:nucleotide-excision repair, DNA incision; IEA:EnsemblFungi. DR GO; GO:0070816; P:phosphorylation of RNA polymerase II C-terminal domain; IEA:EnsemblFungi. DR GO; GO:0045951; P:positive regulation of mitotic recombination; IEA:EnsemblFungi. DR GO; GO:0010525; P:regulation of transposition, RNA-mediated; IEA:EnsemblFungi. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:EnsemblFungi. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CCU82239.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000015441}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:CCU82239.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CCU82239.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CCU82239.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000015441}. FT DOMAIN 1 183 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 156 198 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 694 AA; 79010 MW; 7781AFA7E489F3FC CRC64; MSEIEKALAE LKALMKYRAD QLGYEEDFRG LGLTSRKNLC LHPTIRREKS GVIVDAKCRS LTAGFVKEKK SRGEDVQNLD LKEPHNLVDP GVYTLDGLMR YCEQEKICPY FASRRMVAER VSKELSKDCI VVFDEAHNID NVCIESLSTD ITNDSLRKAT RGAQNLENKI AEMKENDKEK LVNEYAKLVE GLKDADEARA EDAFMSNPVL PDDLLKEAVP GNIRRAEHFV AFLKRFIEYL KARFLPTKSI QVNPPKDSNE KYTFIEKKPL RFCAERLTSL VRTLELANIE DYQPLQEVAT FATLVATYEK GFLLILEPYE SDAAEVPNPV LHFTCLDAAI AIKPVFDRFS SVIITSGTIS PLEMYPRILG FNTVVQESYS MTLARRSFLP IIVTRGSDQV AISSGFQVRN EPSVVRNYGH LLTEFAKLTP DGMVVFFPSY LYMESIISMW QGMGILDEVW KYKLILVETP DAQETSLALE TYRTACCNGR GAILLCVARG KVSEGIDFDH QYGRTVLCIG VPFQYTESRI LKARLEFLRE TYRIRENDFL SFDAMRHAAQ CLGRVLRGKD DYGIMVLADR RFLKKRVQLP KWINQALLDS EVNLSTDMAV GAAKKFLRGM AQPFNATDQE GISTWSIVDL QRFQEKEGEE LIQNLSKELA SKNLTKLEDR PIKEDEFDFD EDELELSIMD VDTK // ID N1PH84_DOTSN Unreviewed; 798 AA. AC N1PH84; DT 26-JUN-2013, integrated into UniProtKB/TrEMBL. DT 26-JUN-2013, sequence version 1. DT 11-MAY-2016, entry version 21. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EME41988.1}; GN ORFNames=DOTSEDRAFT_72929 {ECO:0000313|EMBL:EME41988.1}; OS Dothistroma septosporum (strain NZE10 / CBS 128990) (Red band needle OS blight fungus) (Mycosphaerella pini). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; OC Dothideomycetes; Dothideomycetidae; Capnodiales; Mycosphaerellaceae; OC Dothistroma. OX NCBI_TaxID=675120 {ECO:0000313|EMBL:EME41988.1, ECO:0000313|Proteomes:UP000016933}; RN [1] {ECO:0000313|Proteomes:UP000016933} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=NZE10 / CBS 128990 {ECO:0000313|Proteomes:UP000016933}; RX PubMed=23209441; DOI=10.1371/journal.pgen.1003088; RA de Wit P.J.G.M., van der Burgt A., Oekmen B., Stergiopoulos I., RA Abd-Elsalam K.A., Aerts A.L., Bahkali A.H., Beenen H.G., Chettri P., RA Cox M.P., Datema E., de Vries R.P., Dhillon B., Ganley A.R., RA Griffiths S.A., Guo Y., Hamelin R.C., Henrissat B., Kabir M.S., RA Jashni M.K., Kema G., Klaubauf S., Lapidus A., Levasseur A., RA Lindquist E., Mehrabi R., Ohm R.A., Owen T.J., Salamov A., Schwelm A., RA Schijlen E., Sun H., van den Burg H.A., van Ham R.C.H.J., Zhang S., RA Goodwin S.B., Grigoriev I.V., Collemare J., Bradshaw R.E.; RT "The genomes of the fungal plant pathogens Cladosporium fulvum and RT Dothistroma septosporum reveal adaptation to different hosts and RT lifestyles but also signatures of common ancestry."; RL PLoS Genet. 8:E1003088-E1003088(2012). RN [2] {ECO:0000313|EMBL:EME41988.1, ECO:0000313|Proteomes:UP000016933} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=NZE10 / CBS 128990 {ECO:0000313|Proteomes:UP000016933}; RX PubMed=23236275; DOI=10.1371/journal.ppat.1003037; RA Ohm R.A., Feau N., Henrissat B., Schoch C.L., Horwitz B.A., RA Barry K.W., Condon B.J., Copeland A.C., Dhillon B., Glaser F., RA Hesse C.N., Kosti I., LaButti K., Lindquist E.A., Lucas S., RA Salamov A.A., Bradshaw R.E., Ciuffetti L., Hamelin R.C., Kema G.H.J., RA Lawrence C., Scott J.A., Spatafora J.W., Turgeon B.G., RA de Wit P.J.G.M., Zhong S., Goodwin S.B., Grigoriev I.V.; RT "Diverse lifestyles and strategies of plant pathogenesis encoded in RT the genomes of eighteen Dothideomycetes fungi."; RL PLoS Pathog. 8:E1003037-E1003037(2012). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; KB446541; EME41988.1; -; Genomic_DNA. DR EnsemblFungi; EME41988; EME41988; DOTSEDRAFT_72929. DR Proteomes; UP000016933; Unassembled WGS sequence. DR GO; GO:0005829; C:cytosol; IEA:EnsemblFungi. DR GO; GO:0000112; C:nucleotide-excision repair factor 3 complex; IEA:EnsemblFungi. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0000717; P:nucleotide-excision repair, DNA duplex unwinding; IEA:EnsemblFungi. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000016933}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000016933}. FT DOMAIN 7 284 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 798 AA; 90794 MW; A8253450D33926EE CRC64; MKFYIEDLPV LFPYPRIYPE QYAYMCDLKR TLDAGGHCVL EMPSGTGKTV SLLSLIVAYQ QFYPEARKLI YCSRTMSEIE KALAELKALM KYRADQLGEV EDFRGLGLTS RKNLCLHPSV RREKSGSVVD ARCRSLTAGF VKEKKERGED VDLCIYHDNL DLLEPHNLIP PGVWTLDGML QYGEQHKQCP YFTARRMMPF CNVIIYSYHY LLDPKIAERV SKELSKDCIV VFDEAHNIDN VCIESLSIDL TEDSLRKAAR GASNLEQKIT EMKDTDAEKL QNEYAKLVEG LREADQARDE GAFMSNPALP DDLLKEAVPG NIRRAEHFTA FLKRFIEYLK TRMKVLHVIS ETPPSFLQHL KELTFIEKKP LRFCAERLTS LVRTLELTNI EDYQPLQEVA TFATLVATYD TGFLLILEPY ESDSATVANP ILHFTCLDAA IAIKPVFDRF SSVIITSGTI SPLEMYPKML GFEAVVQESY AMTLARRSFL PMIVTRGADQ APISSNFQRR NDPNVVKNYG QLLIKFSKLT PDGIVVFFPS YLYMESVISM WQNMGTLDEV WKSKLILVET PDSQETSLAL ETYRTACSNG RGAVLLCVAR GKVSEGIDFD HHYGRTVLCI GIPYQYTESR ILKARLEFLQ ETYRIKDSTF LAFDAMRHCA QCLGRVLRGK DDYGIMVMAD DRFKKRKEQL PKWIGSALMD ADSNMSVDQA EAAAKKFLKQ MSKPFPAHVQ DGISTWSYED LMAHKQKAEA EVERQERNGE YNGDHHVHGD LIMAEAQAEE EAMYNDPDMD AAMLQLEG // ID N1RAU6_FUSC4 Unreviewed; 774 AA. AC N1RAU6; DT 26-JUN-2013, integrated into UniProtKB/TrEMBL. DT 26-JUN-2013, sequence version 1. DT 11-MAY-2016, entry version 22. DE SubName: Full=DNA repair helicase rad15 {ECO:0000313|EMBL:EMT62361.1}; GN ORFNames=FOC4_g10005975 {ECO:0000313|EMBL:EMT62361.1}; OS Fusarium oxysporum f. sp. cubense (strain race 4) (Panama disease OS fungus). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; OC Sordariomycetes; Hypocreomycetidae; Hypocreales; Nectriaceae; OC Fusarium; Fusarium oxysporum species complex. OX NCBI_TaxID=1229665 {ECO:0000313|EMBL:EMT62361.1, ECO:0000313|Proteomes:UP000016929}; RN [1] {ECO:0000313|Proteomes:UP000016929} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=race 4 {ECO:0000313|Proteomes:UP000016929}; RA Fang X., Huang J.; RT "Genome sequencing and comparative transcriptomics of race 1 and race RT 4 of banana pathogen: Fusarium oxysporum f. sp. cubense."; RL Submitted (SEP-2012) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; KB726995; EMT62361.1; -; Genomic_DNA. DR EnsemblFungi; EMT62361; EMT62361; FOC4_g10005975. DR Proteomes; UP000016929; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EMT62361.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000016929}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EMT62361.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EMT62361.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EMT62361.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000016929}. FT DOMAIN 1 267 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 240 282 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 774 AA; 89301 MW; BE49DD7D19489AA9 CRC64; MKFNIDDLPV LFPYPRIYPG GHCVLEMPSG TGKTVSLLSL IVAYQQYMPE KRKLIYCSRT MSEIEKALVE LKSLMKYRAE QLGYEEEFRG LGLTSRKNLC LHPSVKREKS GAIVDARCRS LTAGFVKEKK ERGENVDVCV YHDNLDLLEP HNLIPNGVWS FDDMIRYGEE HKQCPYFTAR RMMQYCNVVI FSYHYLLDPK IAERVSKDFS KDCIVVFDEA HNIDNVCIES LSTDITEDSL RKATRGAQNL ENKISQMRDT DQQQLQNEYE KLVQGLRDAD EARQEDAFMA NPALPEDLLK EAVPGNIRRA EHFIAFLKRF IEYLKTRMKV RQVISETPTS FLAHLREHTF IEKKPLRFCA ERLTSLVRTL ELTNIEDYQP LQEVATFATL VATYEKGFLL ILEPFESDTA EVPNPVLHFT CLDAAIAIKP VFDRFYSVII TSGTISPLEI YPKMLDFSTV IQESYAMTLA RRSFMPMIVT RGSDQASVST SFQVRNEPSV VRNYGNLLTE FAKITPDGMV VFFPSYLYME SIISMWQGMG ILDEVWKYKL ILVETPDAQE TSLALETYRT ACCNGRGAVL LCVARGKVSE GIDFDHQYGR TVLCIGVPFQ YTESRILKAR LQFLRETYRI KENDFLSFDA MRHAAQCLGR VLRGKDDYGI MVLADRRFQK KRSQLPKWIN QGLQESDVNL STDMAVSSAR RFLRTMAQPF RAKDQEGIST WGYKDLMEHK EKMDLERIKE LEEEAQRPKP AAQDNNFEYH DDEFDQDMME MDGF // ID N4UZI0_FUSC1 Unreviewed; 774 AA. AC N4UZI0; DT 26-JUN-2013, integrated into UniProtKB/TrEMBL. DT 26-JUN-2013, sequence version 1. DT 11-MAY-2016, entry version 22. DE SubName: Full=DNA repair helicase rad15 {ECO:0000313|EMBL:ENH74186.1}; GN ORFNames=FOC1_g10007352 {ECO:0000313|EMBL:ENH74186.1}; OS Fusarium oxysporum f. sp. cubense (strain race 1) (Panama disease OS fungus). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; OC Sordariomycetes; Hypocreomycetidae; Hypocreales; Nectriaceae; OC Fusarium; Fusarium oxysporum species complex. OX NCBI_TaxID=1229664 {ECO:0000313|EMBL:ENH74186.1, ECO:0000313|Proteomes:UP000016928}; RN [1] {ECO:0000313|Proteomes:UP000016928} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=race 1 {ECO:0000313|Proteomes:UP000016928}; RA Fang X., Huang J.; RT "Genome sequencing and comparative transcriptomics of race 1 and race RT 4 of banana pathogen: Fusarium oxysporum f. sp. cubense."; RL Submitted (SEP-2012) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; KB730049; ENH74186.1; -; Genomic_DNA. DR EnsemblFungi; ENH74186; ENH74186; FOC1_g10007352. DR Proteomes; UP000016928; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:ENH74186.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000016928}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:ENH74186.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:ENH74186.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:ENH74186.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000016928}. FT DOMAIN 1 267 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 240 282 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 774 AA; 89297 MW; 405CCBBCC625E7D6 CRC64; MKFNIDDLPV LFPYPRIYPG GHCVLEMPSG TGKTVSLLSL IVAYQQYMPE KRKLIYCSRT MSEIEKALVE LKSLMKYRAE QLGYEEEFRG LGLTSRKNLC LHPSVKREKS GAIVDARCRS LTAGFVKEKK ERGENVDVCV YHDNLDLLEP HNLIPNGVWS FDDMIRYGEE HKQCPYFTAR RMMQYCNVVI FSYHYLLDPK IAERVSKDFS KDCIVVFDEA HNIDNVCIES LSTDITEDSL RKATRGAQNL ENKISQMRDT DQQQLQNEYE KLVQGLRDAD EARQEDAFMA NPALPEDLLK EAVPGNIRRA EHFIAFLKRF IEYLKTRMKV RQVISETPPS FLAHLREHTF IEKKPLRFCA ERLTSLVRTL ELTNIEDYQP LQEVATFATL VATYEKGFLL ILEPFESDTA EVPNPVLHFT CLDAAIAIKP VFDRFYSVII TSGTISPLEI YPKMLDFSTV IQESYAMTLA RRSFMPMIVT RGSDQASVST SFQVRNEPSV VRNYGNLLTE FAKITPDGMV VFFPSYLYME SIISMWQGMG ILDEVWKYKL ILVETPDAQE TSLALETYRT ACCNGRGAVL LCVARGKVSE GIDFDHQYGR TVLCIGVPFQ YTESRILKAR LQFLRETYRI KENDFLSFDA MRHAAQCLGR VLRGKDDYGI MVLADRRFQK KRSQLPKWIN QGLQESDVNL STDMAVSSAR RFLRTMAQPF RAKDQEGIST WGYKDLMEHK EKMDLERIKE LEEEAQRPKP AAQDNNFEYH DDEFDQDMME MDGF // ID N4VKX5_COLOR Unreviewed; 735 AA. AC N4VKX5; DT 26-JUN-2013, integrated into UniProtKB/TrEMBL. DT 26-JUN-2013, sequence version 1. DT 11-MAY-2016, entry version 20. DE SubName: Full=DNA repair helicase rad3 {ECO:0000313|EMBL:ENH84452.1}; GN ORFNames=Cob_07267 {ECO:0000313|EMBL:ENH84452.1}; OS Colletotrichum orbiculare (strain 104-T / ATCC 96160 / CBS 514.97 / OS LARS 414 / MAFF 240422) (Cucumber anthracnose fungus) (Colletotrichum OS lagenarium). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; OC Sordariomycetes; Hypocreomycetidae; Glomerellales; Glomerellaceae; OC Colletotrichum. OX NCBI_TaxID=1213857 {ECO:0000313|EMBL:ENH84452.1, ECO:0000313|Proteomes:UP000014480}; RN [1] {ECO:0000313|Proteomes:UP000014480} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=104-T / ATCC 96160 / CBS 514.97 / LARS 414 / MAFF 240422 RC {ECO:0000313|Proteomes:UP000014480}; RX PubMed=23252678; DOI=10.1111/nph.12085; RA Gan P., Ikeda K., Irieda H., Narusaka M., O'Connell R.J., Narusaka Y., RA Takano Y., Kubo Y., Shirasu K.; RT "Comparative genomic and transcriptomic analyses reveal the RT hemibiotrophic stage shift of Colletotrichum fungi."; RL New Phytol. 197:1236-1249(2013). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; KB725806; ENH84452.1; -; Genomic_DNA. DR EnsemblFungi; ENH84452; ENH84452; Cob_07267. DR Proteomes; UP000014480; Unassembled WGS sequence. DR GO; GO:0000439; C:core TFIIH complex; IEA:EnsemblFungi. DR GO; GO:0005829; C:cytosol; IEA:EnsemblFungi. DR GO; GO:0005675; C:holo TFIIH complex; IEA:EnsemblFungi. DR GO; GO:0000112; C:nucleotide-excision repair factor 3 complex; IEA:EnsemblFungi. DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:EnsemblFungi. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0043141; F:ATP-dependent 5'-3' DNA helicase activity; IEA:EnsemblFungi. DR GO; GO:0003684; F:damaged DNA binding; IEA:EnsemblFungi. DR GO; GO:0000717; P:nucleotide-excision repair, DNA duplex unwinding; IEA:EnsemblFungi. DR GO; GO:0033683; P:nucleotide-excision repair, DNA incision; IEA:EnsemblFungi. DR GO; GO:0070816; P:phosphorylation of RNA polymerase II C-terminal domain; IEA:EnsemblFungi. DR GO; GO:0045951; P:positive regulation of mitotic recombination; IEA:EnsemblFungi. DR GO; GO:0010525; P:regulation of transposition, RNA-mediated; IEA:EnsemblFungi. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:EnsemblFungi. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 2. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:ENH84452.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000014480}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:ENH84452.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:ENH84452.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:ENH84452.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000014480}. FT DOMAIN 1 238 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 198 225 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 735 AA; 84140 MW; 0EFB141CDA14D019 CRC64; MSEIEKALAE LKALMKYRAE QLGVEEEFRG LGLTSRKNLC LHPSVKQEKS GAIVDARCRS LTAGFVKEKK DRGENVDVCV YHDNLDLLEP HNLIPNGVWT FDGLLRYGEQ HKQCPYFTAR RMVRASHSNP HSTSSADTDK MQFCNVIIYS YHYLLDPKIA ERVSKELSKD CIVVFDEAHN IDNVCIESLS TDITEDSLRK ATRGAQNLER KISEMRDTDQ EQLQNEYLKL VEGLRDADEA RQEDAFMANP ALPDDLLKEA VPGNIRRAEH FVSFLKRFIE YLKTRMKVRH TISETPPSFL AHLREYTFIE KKPLRFCAER LTSLVRTLEL TNIEDYQPLQ EVATFATLVA TYEKGFLLIL EPFESETAEV PNPVLHFTCL DAAIAIRPVF DRFSSVIITS GTISPLEMYP KMLGFSTVVQ ESYSMTLARR SFLPMIVTRG SDQASVSTSF QVRNEPSVVR NYGTLLTEFA KITPDGMVVF FPSYLYMESI ISMWQGMNIL EEVWKYKLIL VETPDAQETS LALETYRTAC CNGRGAVLLC VARGKVSEGI DFDHQYGRTV LCVGVPFQYT ESRILKARLE FLRETYRIRE NDFLSFDAMR HAAQCLGRVL RGKDDYGIMV LADRRFQKKR VQLPKWINQG LLDADTNLST DMAVSSARRF LKQMAQLFRA KDQEGVSTWS YNDLMRHKEK MDLERIQQLE STKNPGVNEY GRGTGDLNGI DDDLERDMME IDDGF // ID N6UAL2_DENPD Unreviewed; 762 AA. AC N6UAL2; DT 26-JUN-2013, integrated into UniProtKB/TrEMBL. DT 26-JUN-2013, sequence version 1. DT 11-MAY-2016, entry version 24. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ENN75657.1, ECO:0000313|EnsemblMetazoa:ENN75657}; DE Flags: Fragment; GN ORFNames=D910_06963 {ECO:0000313|EMBL:ERL89598.1}, GN YQE_07835 {ECO:0000313|EMBL:ENN75657.1}; OS Dendroctonus ponderosae (Mountain pine beetle). OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; OC Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; OC Cucujiformia; Curculionidae; Scolytinae; Dendroctonus. OX NCBI_TaxID=77166 {ECO:0000313|EMBL:ENN75657.1, ECO:0000313|Proteomes:UP000019118}; RN [1] {ECO:0000313|EnsemblMetazoa:ENN75657, ECO:0000313|Proteomes:UP000019118} RP NUCLEOTIDE SEQUENCE. RX PubMed=19747388; DOI=10.1186/gb-2009-10-9-r94; RA Diguistini S., Liao N.Y., Platt D., Robertson G., Seidel M., RA Chan S.K., Docking T.R., Birol I., Holt R.A., Hirst M., Mardis E., RA Marra M.A., Hamelin R.C., Bohlmann J., Breuil C., Jones S.J.; RT "De novo genome sequence assembly of a filamentous fungus using RT Sanger, 454 and Illumina sequence data."; RL Genome Biol. 10:R94-R94(2009). RN [2] {ECO:0000313|EMBL:ENN75657.1, ECO:0000313|Proteomes:UP000019118, ECO:0000313|Proteomes:UP000030742} RP NUCLEOTIDE SEQUENCE. RX PubMed=23537049; DOI=10.1186/gb-2013-14-3-r27; RA Keeling C.I., Yuen M.M., Liao N.Y., Roderick Docking T., Chan S.K., RA Taylor G.A., Palmquist D.L., Jackman S.D., Nguyen A., Li M., RA Henderson H., Janes J.K., Zhao Y., Pandoh P., Moore R., Sperling F.A., RA W Huber D.P., Birol I., Jones S.J., Bohlmann J.; RT "Draft genome of the mountain pine beetle, Dendroctonus ponderosae RT Hopkins, a major forest pest."; RL Genome Biol. 14:R27-R27(2013). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; APGK01042823; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; KB741007; ENN75657.1; -; Genomic_DNA. DR EMBL; KB632177; ERL89598.1; -; Genomic_DNA. DR EnsemblMetazoa; ENN75657; ENN75657; YQE_07835. DR OMA; LVVCNYH; -. DR Proteomes; UP000019118; Unassembled WGS sequence. DR Proteomes; UP000030742; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000030742}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000030742}. FT DOMAIN 7 290 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT NON_TER 1 1 {ECO:0000313|EMBL:ENN75657.1}. SQ SEQUENCE 762 AA; 87215 MW; 69B4D0D81F9B0662 CRC64; MRLSVDGLIV YFPYEYIYPE QYAYMCELKK ALDAKGHCLL EMPSGTGKTT TLLSLIVAYM IEHPHDVRKL IYCSRTVPEI EKVMEELKKL LDYYDKLDGQ YPSLVGLVLS SRKNMCIHPQ VSTEREGKIV DGKCHSLTAS YIRERHNIDD TTAVCQYYEG FSLDGKESNL PYGVYNLDDI KQYGRDRNWC PYFLARFAIM HANIVVYSYH YLLDPKIADV VSKELARESV IIFDEAHNID NVCIDSMSVK IHKRTIERAT ANIGTLEKHV SEMRDEDHRK LKEEYQRLVE GLRDASVARD TDLILSNPVL PDEILQEAVP GNIRNAEHFI CFLKRFVEYL KTRLRVQHVV QESPVGFLKD VQQKVCIERK PLRFCAERLA SLLRTLEITD MTEFGPVVLI THLATLVSTY TKGFTIIVEP FDDKTPTVSN PILHFSCLDS SIAIKPVFDR FQTVVITSGT LSPLDMYPKI LNFQPVIMSS FTMTLARPCL LPMIVAKGND QVAISSKFET REDNAVIRNY GQLLVEVAAN VPDGIVCFFT SYLYLESVVA AWYDQGVIDS LQRYKLLFIE TQDSAETSFA LMYYIKACES GRGAVLLSVA RGKVSEGVDF DHHLGRAVLM FGIPYVYTQS RILKARLDYL RDQFQIREND FLTFDAMRHA AQCVGRAIRG KTDYGIMIFA DKRFSRADKR SKLPKWIQEH LKDSLCNLST EEAIQIAKRW LRQMAQPFTR EDQLGVSLLT LEQLEAMEEK KLGDQAQQKS DS // ID Q0D0E0_ASPTN Unreviewed; 790 AA. AC Q0D0E0; DT 17-OCT-2006, integrated into UniProtKB/TrEMBL. DT 17-OCT-2006, sequence version 1. DT 11-MAY-2016, entry version 58. DE SubName: Full=DNA repair helicase RAD3 {ECO:0000313|EMBL:EAU39240.1}; GN ORFNames=ATEG_00594 {ECO:0000313|EMBL:EAU39240.1}; OS Aspergillus terreus (strain NIH 2624 / FGSC A1156). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; OC Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus. OX NCBI_TaxID=341663 {ECO:0000313|EMBL:EAU39240.1, ECO:0000313|Proteomes:UP000007963}; RN [1] {ECO:0000313|Proteomes:UP000007963} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=NIH 2624 / FGSC A1156 {ECO:0000313|Proteomes:UP000007963}; RA Birren B.W., Lander E.S., Galagan J.E., Nusbaum C., Devon K., Henn M., RA Ma L.-J., Jaffe D.B., Butler J., Alvarez P., Gnerre S., Grabherr M., RA Kleber M., Mauceli E.W., Brockman W., Rounsley S., Young S.K., RA LaButti K., Pushparaj V., DeCaprio D., Crawford M., Koehrsen M., RA Engels R., Montgomery P., Pearson M., Howarth C., Larson L., Luoma S., RA White J., Alvarado L., Kodira C.D., Zeng Q., Oleary S., Yandava C., RA Denning D.W., Nierman W.C., Milne T., Madden K.; RT "Annotation of the Aspergillus terreus NIH2624 genome."; RL Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CH476594; EAU39240.1; -; Genomic_DNA. DR RefSeq; XP_001210680.1; XM_001210680.1. DR ProteinModelPortal; Q0D0E0; -. DR EnsemblFungi; CADATEAT00007841; CADATEAP00007841; CADATEAG00007841. DR GeneID; 4355348; -. DR EuPathDB; FungiDB:ATEG_00594; -. DR HOGENOM; HOG000205390; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000007963; Unassembled WGS sequence. DR GO; GO:0000439; C:core TFIIH complex; IEA:EnsemblFungi. DR GO; GO:0005675; C:holo TFIIH complex; IEA:EnsemblFungi. DR GO; GO:0000112; C:nucleotide-excision repair factor 3 complex; IEA:EnsemblFungi. DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:EnsemblFungi. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0043141; F:ATP-dependent 5'-3' DNA helicase activity; IEA:EnsemblFungi. DR GO; GO:0003684; F:damaged DNA binding; IEA:EnsemblFungi. DR GO; GO:0033683; P:nucleotide-excision repair, DNA incision; IEA:EnsemblFungi. DR GO; GO:0070816; P:phosphorylation of RNA polymerase II C-terminal domain; IEA:EnsemblFungi. DR GO; GO:0045951; P:positive regulation of mitotic recombination; IEA:EnsemblFungi. DR GO; GO:0010525; P:regulation of transposition, RNA-mediated; IEA:EnsemblFungi. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:EnsemblFungi. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EAU39240.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000007963}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EAU39240.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EAU39240.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EAU39240.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000007963}. FT DOMAIN 7 284 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 248 275 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 790 AA; 90288 MW; 92B8D142B4A8C42C CRC64; MKFFIDDLPV LFPYPRIYPE QYAYMCDLKK TLDAGGHCVL EMPSGTGKTV SLLSLIVAYQ LHYPEHRKLI YCSRTMSEIE KALAELKALM KFRAKELGYT EDFRALGLTS RKNLCLHPSV KREKSGTVVD ARCRSLTAGF VKEKKERGED VELCTYHENL DLLEPHNLVP PGVFTLDGLI KYGEQHKQCP YFSARRMMPF CNVIIYSYHY LLDPKIAERV SREFSKDCIV VFDEAHNIDN VCIESLSIDI TEDSLRKATR GANNLERKIT EMKSSDAEKL QNEYTKLVEG LREAEQAREE DQFISNPVLP DDLLKEAVPG NIRRAEHFVA FLKRFIEYLK TRMKVTHTIS ETPPSFLTHV KDLTYIERKP LRFCAERLTS LVRTLELINI EDYQPLQEVA TFATLVATYD KGFLLILEPF ESEAATVPNP ILHFTCLDAA IAIKPVFDRF SSVIITSGTL SPLEMYPKML GFTTVMQESY SMTLARRSFL PMIVTRGSDQ AQISSSFQIR NDPGVVRNYG NIVLEFSRIT PDGVVVFFPS YLYMESIISM WQGMGILDSI WNYKLILVET PDAQESSLAL ETYRTACCNG RGAILFCVAR GKVSEGIDFD HHYGRAVLCI GVPFQYTESR ILKARLEFLR ENYRIRENDF LSFDAMRHAA QCLGRVLRGK DDYGVMVLAD RRFQKKRSQL PKWISQAMLE SETNLSTDMA VATAKNFLRT MAQPFKAKDQ EGISTWSLAD LERHREKQKV EEERARREAL ANGHGTNGHA AVADEFDDDI DEDLMMLDAQ // ID Q0IGE4_AEDAE Unreviewed; 760 AA. AC Q0IGE4; DT 03-OCT-2006, integrated into UniProtKB/TrEMBL. DT 03-OCT-2006, sequence version 1. DT 11-MAY-2016, entry version 71. DE SubName: Full=AAEL000404-PA {ECO:0000313|EMBL:EAT48594.1}; GN ORFNames=AAEL000404 {ECO:0000313|EMBL:EAT48594.1}; OS Aedes aegypti (Yellowfever mosquito) (Culex aegypti). OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; OC Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; OC Culicidae; Culicinae; Aedini; Aedes; Stegomyia. OX NCBI_TaxID=7159 {ECO:0000313|EMBL:EAT48594.1, ECO:0000313|Proteomes:UP000008820}; RN [1] {ECO:0000313|EMBL:EAT48594.1, ECO:0000313|Proteomes:UP000008820} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=LVPib12 {ECO:0000313|Proteomes:UP000008820}; RX PubMed=17510324; DOI=10.1126/science.1138878; RA Nene V., Wortman J.R., Lawson D., Haas B.J., Kodira C.D., Tu Z.J., RA Loftus B.J., Xi Z., Megy K., Grabherr M., Ren Q., Zdobnov E.M., RA Lobo N.F., Campbell K.S., Brown S.E., Bonaldo M.F., Zhu J., RA Sinkins S.P., Hogenkamp D.G., Amedeo P., Arensburger P., RA Atkinson P.W., Bidwell S.L., Biedler J., Birney E., Bruggner R.V., RA Costas J., Coy M.R., Crabtree J., Crawford M., DeBruyn B., RA DeCaprio D., Eiglmeier K., Eisenstadt E., El-Dorry H., Gelbart W.M., RA Gomes S.L., Hammond M., Hannick L.I., Hogan J.R., Holmes M.H., RA Jaffe D., Johnston S.J., Kennedy R.C., Koo H., Kravitz S., RA Kriventseva E.V., Kulp D., Labutti K., Lee E., Li S., Lovin D.D., RA Mao C., Mauceli E., Menck C.F., Miller J.R., Montgomery P., Mori A., RA Nascimento A.L., Naveira H.F., Nusbaum C., O'Leary S.B., Orvis J., RA Pertea M., Quesneville H., Reidenbach K.R., Rogers Y.-H.C., Roth C.W., RA Schneider J.R., Schatz M., Shumway M., Stanke M., Stinson E.O., RA Tubio J.M.C., Vanzee J.P., Verjovski-Almeida S., Werner D., RA White O.R., Wyder S., Zeng Q., Zhao Q., Zhao Y., Hill C.A., RA Raikhel A.S., Soares M.B., Knudson D.L., Lee N.H., Galagan J., RA Salzberg S.L., Paulsen I.T., Dimopoulos G., Collins F.H., Bruce B., RA Fraser-Liggett C.M., Severson D.W.; RT "Genome sequence of Aedes aegypti, a major arbovirus vector."; RL Science 316:1718-1723(2007). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CH477192; EAT48594.1; -; Genomic_DNA. DR RefSeq; XP_001656074.1; XM_001656024.1. DR UniGene; Aae.7252; -. DR ProteinModelPortal; Q0IGE4; -. DR STRING; 7159.AAEL000404-PA; -. DR EnsemblMetazoa; AAEL000404-RA; AAEL000404-PA; AAEL000404. DR GeneID; 5576340; -. DR KEGG; aag:AaeL_AAEL000404; -. DR VectorBase; AAEL000404; Aedes aegypti. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR HOGENOM; HOG000205390; -. DR InParanoid; Q0IGE4; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG70W3CM; -. DR PhylomeDB; Q0IGE4; -. DR Proteomes; UP000008820; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000008820}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000008820}. FT DOMAIN 7 283 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 760 AA; 86903 MW; 794B94F0CEDB06BB CRC64; MRISVDGLLV YFPYEYIYPE QYAYMLELKR TFDAKGHCLL EMPSGTGKTT TLLSLIVAYI MENPHIVRKL IYCSRTVPEI EKVIAELKHL MNYYEKQTGV MPNITGLVLS SRKNMCIHSE VSKERDGKIV DAKCYGMTAS YVRERATTDD SVAVCQYYEG FQAEGKESTL PPGVYSIDDL KDFGRERNWC PYFLSRFAIN QAHVVVYSYH YLLDPKIAEV VSKELAKESV VVCDEAHNID NVCVDSMSVK INRRLIEKST TGVHTLEKYV AEMKEDDRKR LNDEYLRLVQ GLKDASFARE TDMVLANPVL PTEILKEVVP GNIRNADHFL SFLKRFIEYI KSRLRVQHVV QESPAGFLKD IQQKVCIERK PLRFCAERLS SLLRTLEITD LTEFGPLTVI TSFATLVSTY TKGFTIIIEP FDDKTPTVSN PILHLSCMDS SIAMKPIFQR FQSVVITSGT LSPMDMYPKI LDFEPVVMSS FTMTLARPCL LPMIVSRGND QVAISSKFET REDTAVTRNY GQLLVETAKT VPDGIVCFFT SYLYLESVVA SWYDQGIIDT LLRYKLLFIE TQDNAETSYA LMNYVKACEC GRGAVLLAVA RGRVSEGVDF DHHLGRAVLM FGIPYVYTQS RILKARLDYL RDQFQIREND FLTFDALRHA AQCVGRAIRG KTDYGIMIFA DKRFGRQDKR GKLPKWIQEH LTDNLTNLST EEAMQLAKRW LRQMAQPFTR EDQLGVSLLT LEQLQSMEKE KLEKQAQGKK // ID Q0UFI9_PHANO Unreviewed; 724 AA. AC Q0UFI9; DT 05-SEP-2006, integrated into UniProtKB/TrEMBL. DT 05-FEB-2008, sequence version 2. DT 11-MAY-2016, entry version 70. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EAT82740.2}; GN ORFNames=SNOG_09475 {ECO:0000313|EMBL:EAT82740.2}; OS Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OS (Glume blotch fungus) (Septoria nodorum). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; OC Dothideomycetes; Pleosporomycetidae; Pleosporales; Pleosporineae; OC Phaeosphaeriaceae; Parastagonospora. OX NCBI_TaxID=321614 {ECO:0000313|EMBL:EAT82740.2, ECO:0000313|Proteomes:UP000001055}; RN [1] {ECO:0000313|Proteomes:UP000001055} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=SN15 / ATCC MYA-4574 / FGSC 10173 RC {ECO:0000313|Proteomes:UP000001055}; RX PubMed=18024570; DOI=10.1105/tpc.107.052829; RA Hane J.K., Lowe R.G., Solomon P.S., Tan K.C., Schoch C.L., RA Spatafora J.W., Crous P.W., Kodira C., Birren B.W., Galagan J.E., RA Torriani S.F., McDonald B.A., Oliver R.P.; RT "Dothideomycete-plant interactions illuminated by genome sequencing RT and EST analysis of the wheat pathogen Stagonospora nodorum."; RL Plant Cell 19:3347-3368(2007). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CH445339; EAT82740.2; -; Genomic_DNA. DR RefSeq; XP_001799767.1; XM_001799715.1. DR ProteinModelPortal; Q0UFI9; -. DR EnsemblFungi; SNOT_09475; SNOT_09475; SNOG_09475. DR GeneID; 5976672; -. DR KEGG; pno:SNOG_09475; -. DR InParanoid; Q0UFI9; -. DR KO; K10844; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000001055; Unassembled WGS sequence. DR GO; GO:0005829; C:cytosol; IEA:EnsemblFungi. DR GO; GO:0000112; C:nucleotide-excision repair factor 3 complex; IEA:EnsemblFungi. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0000717; P:nucleotide-excision repair, DNA duplex unwinding; IEA:EnsemblFungi. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 3. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000001055}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000001055}. FT DOMAIN 1 208 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 724 AA; 82560 MW; 3BA50C249702342E CRC64; MSEIEKALAE LKNLMKYRTK ELGYEEEFRG LGLTSRKNLC LHPTVKREKS GTVVDSKCRS LTAGFVKEKK ERGEDVDLCV YHDNLDLLEP HNLVPPGVFT FDGLLKYGEK HKQCPYFSAR RMMAYCNVII YSYHYLLDPK IADRVSKELS KDCIVVFDEA HNIDNVCIES LSIDITEDSL RKATKGVNNL DRKITEMKTT DAEKLQSEYA KLVEGLRTAD EARQEDTFMA NPALPDDLLT EAVPGNIRRA EHFVAFLKRF IEYLKTRMKV LHVISETPPS FLQHLRDLTF IEKKPLRFCA ERLTSLVRTL ELTNIEDYQP LQDIATFATL VATYETGFLL ILEPFESATA TVPNPVLHFT CLDAAIAIKP VFERFYSVIV TSGTMSPLDM YPRMLNFNTV VQESFTMTLT RKTFLPMIVD RGNDQNQITS QFEHRNDLQV QRNFGTLLIE FCKLTPDGVV VFFPSYLYME SIISAWQGME ILDTVWKYKL ILVETPDAQE TALALETFRT ACNNGRGAVL LCVARGKVSE GIDFDHHYGR TVLCMGVPYQ YTESRILKAR LEFLRETYRI KESDFLSFDA MRHAAQCLGR VIRGKDDYGI MVLADKRFNK KVTQLPKWIQ QGLEAKSTKL SIDQAVGNAK AFLKDMSKPW SRKEGEGHSS WSYEDLRAHQ KKREQLAISG TDNASMRALE GRAEKEKVED DGDEFGGEGM DALMVDADAD ADLR // ID Q24WL0_DESHY Unreviewed; 774 AA. AC Q24WL0; DT 18-APR-2006, integrated into UniProtKB/TrEMBL. DT 18-APR-2006, sequence version 1. DT 11-MAY-2016, entry version 62. DE SubName: Full=Putative uncharacterized protein {ECO:0000313|EMBL:BAE83582.1}; GN OrderedLocusNames=DSY1793 {ECO:0000313|EMBL:BAE83582.1}; OS Desulfitobacterium hafniense (strain Y51). OC Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; OC Desulfitobacterium. OX NCBI_TaxID=138119 {ECO:0000313|Proteomes:UP000001946}; RN [1] {ECO:0000313|EMBL:BAE83582.1, ECO:0000313|Proteomes:UP000001946} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Y51 {ECO:0000313|Proteomes:UP000001946}; RX PubMed=16513756; DOI=10.1128/JB.188.6.2262-2274.2006; RA Nonaka H., Keresztes G., Shinoda Y., Ikenaga Y., Abe M., Naito K., RA Inatomi K., Furukawa K., Inui M., Yukawa H.; RT "Complete genome sequence of the dehalorespiring bacterium RT Desulfitobacterium hafniense Y51 and comparison with Dehalococcoides RT ethenogenes 195."; RL J. Bacteriol. 188:2262-2274(2006). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AP008230; BAE83582.1; -; Genomic_DNA. DR RefSeq; WP_011459887.1; NC_007907.1. DR ProteinModelPortal; Q24WL0; -. DR STRING; 138119.DSY1793; -. DR EnsemblBacteria; BAE83582; BAE83582; DSY1793. DR KEGG; dsy:DSY1793; -. DR PATRIC; 21672092; VBIDesHaf65307_1992. DR eggNOG; ENOG4107QX6; Bacteria. DR eggNOG; COG1199; LUCA. DR HOGENOM; HOG000183657; -. DR OMA; DYNYYFD; -. DR OrthoDB; EOG61P6NQ; -. DR BioCyc; DHAF138119:GHT5-1844-MONOMER; -. DR Proteomes; UP000001946; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 5. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR001650; Helicase_C. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. DR PROSITE; PS51194; HELICASE_CTER; 1. PE 4: Predicted; KW Complete proteome {ECO:0000313|Proteomes:UP000001946}; KW Reference proteome {ECO:0000313|Proteomes:UP000001946}. FT DOMAIN 181 435 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT DOMAIN 584 762 Helicase C-terminal. FT {ECO:0000259|PROSITE:PS51194}. SQ SEQUENCE 774 AA; 89750 MW; DDB9B3806F30CF6A CRC64; MDKELRVSVR TLVEFVLRQG DLRMGFMSGS RMAEGIYAHQ YLQKERGADY QPEVTLRTTA YQDGFSLEIH GRADGIFRNE SGVVIEEIKS TSLDLDLIDE SYNNLHWAQA QCYAYIVANQ EDLAQVQVQL TYIQLETHEL KEFRKSLSRE ELEFFFKDLV ERYCTWAHRL SAWTEQRNES ISRLEFPYPA YRKGQRELVV AVYKTIKEKH KLYVQAPTGI GKTLGTIFPA LKCLLEGLET PIFYLTAKTI TRTVAEGSLL MLQQQGLSLK RVTLTAKDKV CFCPECECTP EDCSYAKGYY DRLGPALEDI FERDHWNREQ IENCARNHGV CPFEFSLELT NWTDLVICDY NYVFDPRVFL KRFFLEGGDY AFLIDEAHNL VERAREMFSA ELNKEEFLHL KNLVEDQEPV LGKRLQTVNK NFLKLKKQGL EVEKDAPTAL YSSLERVVNE AEKFFKKEET PPWKEKLTEL YFNIQAFLRT AESYDEHYLT YYQYPEQDVR VKLFCVDPSQ QLAQVLNKGR AAVFFSATLS PLEYFIQVLG GEKESYKLQL PSPFPHENLC LMLQKQISTK YNQRSLSLDP IVEGITQLVQ GKTGNYLVYF PSYEYLEQVR ERLLQAHPEF KVLTQTMGMT EADREEFLEA FQEEPRESLV GLALLGGIFG EGIDLTGERL SGAVIIGVGL PQIGTERDII RAHFQERYGQ GFEFAYMYPG MNKVLQACGR VIRTEQDRGA ILLIDERFAR LSYRRLFPKE WHAIHTLQDN SRIPSLLKAF WESS // ID Q2FPE5_METHJ Unreviewed; 654 AA. AC Q2FPE5; DT 21-MAR-2006, integrated into UniProtKB/TrEMBL. DT 21-MAR-2006, sequence version 1. DT 11-MAY-2016, entry version 61. DE SubName: Full=Helicase c2 {ECO:0000313|EMBL:ABD40715.1}; GN OrderedLocusNames=Mhun_0965 {ECO:0000313|EMBL:ABD40715.1}; OS Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC OS 100397 / JF-1). OC Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; OC Methanospirillaceae; Methanospirillum. OX NCBI_TaxID=323259 {ECO:0000313|EMBL:ABD40715.1, ECO:0000313|Proteomes:UP000001941}; RN [1] {ECO:0000313|Proteomes:UP000001941} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 27890 / DSM 864 / NBRC 100397 / JF-1 RC {ECO:0000313|Proteomes:UP000001941}; RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., RA Hammon N., Israni S., Pitluck S., Brettin T., Bruce D., Han C., RA Tapia R., Gilna P., Kiss H., Schmutz J., Larimer F., Land M., RA Kyrpides N., Ivanova N., McInerney M.J., Brockman F., Culley D., RA Ferry J.G., Gunsalus R.P., Morrison M., Plugge C., Scholten J., RA Stams A.J.M., Boone D.R., Richardson P.; RT "Complete sequence of Methanospirillum hungatei JF-1."; RL Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000254; ABD40715.1; -; Genomic_DNA. DR ProteinModelPortal; Q2FPE5; -. DR STRING; 323259.Mhun_0965; -. DR EnsemblBacteria; ABD40715; ABD40715; Mhun_0965. DR KEGG; mhu:Mhun_0965; -. DR eggNOG; arCOG00770; Archaea. DR eggNOG; COG1199; LUCA. DR HOGENOM; HOG000237163; -. DR KO; K10844; -. DR OMA; FAVCGGK; -. DR BioCyc; MHUN323259:GH0L-982-MONOMER; -. DR Proteomes; UP000001941; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000313|EMBL:ABD40715.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000001941}; KW Helicase {ECO:0000313|EMBL:ABD40715.1}; KW Hydrolase {ECO:0000313|EMBL:ABD40715.1}; KW Nucleotide-binding {ECO:0000313|EMBL:ABD40715.1}; KW Reference proteome {ECO:0000313|Proteomes:UP000001941}. FT DOMAIN 1 293 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 654 AA; 74275 MW; 4AA176179F62E7C1 CRC64; MLHRAFETAR TGGVLLIDAP TGSGKSSVVS ALLAGRRDRQ IIVAVRTISQ LTTYIRELEL IRKKQPCLKF SYLVGKSSMC PLGGSGDTYR KCEAVKGFST ALIRERADRG SLDPSKDKVI LDQIRKNDPD HPIICPFFIR SRMAIQNEKA GGLRLVPSDA CKRLSTQVIE RCIKPDTLRE SCGGLCPYEV MAQASLQADV LICNYHHIMD EQIREQLYLN LQREPSEILL LIDEAHNCGD VMQDIMSVSL DHRALEQADH DISSIKKEVK DLEAIRRLIP GIKKFLDGLR RSAVTEDWFD PQLFSRMILR ESLYGTMEEV VDEFMDLAEN IRETNSKRGD FRTTGIERLS AFLYRLHNSG TNPAYLTLFR KDNENIYLEV RNIDPSPALS TLAREHFCSV YISGTLTPLS SYQQLYFRAL PVDYPVSSFS LPNHFPKKNR IVLTTADITS AYSQRQSDEN LKRMISYIRT FCTIPGNLGV WFPSYQMLES VTREVEMHLH DREVFIEPRD SSEAGPLLTR FMSLPGKGKK GILFAVCGGK FSEGLDYRGE MLTGAMVIGL PLAPWNQVRQ MIMHYYTRQY GEEGKFIAYT LPALNKVLQA LGRVLRTPED RGVLIIGDNR FLDPSIKERL PGWMQEEIQE VNVHSFPSLL KGWN // ID Q2GP16_CHAGB Unreviewed; 732 AA. AC Q2GP16; DT 21-MAR-2006, integrated into UniProtKB/TrEMBL. DT 21-MAR-2006, sequence version 1. DT 11-MAY-2016, entry version 53. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EAQ83884.1}; GN ORFNames=CHGG_10288 {ECO:0000313|EMBL:EAQ83884.1}; OS Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC OS 6347 / NRRL 1970) (Soil fungus). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; OC Sordariomycetes; Sordariomycetidae; Sordariales; Chaetomiaceae; OC Chaetomium. OX NCBI_TaxID=306901 {ECO:0000313|EMBL:EAQ83884.1, ECO:0000313|Proteomes:UP000001056}; RN [1] {ECO:0000313|Proteomes:UP000001056} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970 RC {ECO:0000313|Proteomes:UP000001056}; RX PubMed=25720678; DOI=10.1128/genomeA.00021-15; RA Cuomo C.A., Untereiner W.A., Ma L.-J., Grabherr M., Birren B.W.; RT "Draft genome sequence of the cellulolytic fungus Chaetomium RT globosum."; RL Genome Announc. 3:E0002115-E0002115(2015). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CH408035; EAQ83884.1; -; Genomic_DNA. DR RefSeq; XP_001228215.1; XM_001228214.1. DR ProteinModelPortal; Q2GP16; -. DR STRING; 306901.XP_001228215.1; -. DR EnsemblFungi; EAQ83884; EAQ83884; CHGG_10288. DR GeneID; 4396030; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; Q2GP16; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000001056; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000001056}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000001056}. FT DOMAIN 1 227 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 199 226 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 732 AA; 82994 MW; C4ABA18D028FA97C CRC64; MEFNIDYMVD LKKTLDAGGN CVLEMPSGTG KTVTLLSLIV AYQQYYPSHR KLIYCSRTMS EIEKALVELK ALMKFRTERL GHEEEFRGLG LTSRKNLCLH PSVRREKSGN VVDARCRSLT AGFVKEKKEK GEDVEVCVYH DMQYCNVIIY SYHYLLDPKI AERVSKDLSK DCIVVFDEAH NIDNVCIESL STDITDDSLR RATRGAQNLE NKINEMRDSD KQKLQDEYEK LVEGLRGADD GRQEDSFMAN PTLPDDLLKE AVPGNIRRAE HFVAFLRRFI EYLKTRMKVR QVISETPPSF LSHLKEHTFI EKKPLRFCAE RLTSLVRTLE LTNIEDYQPL QEVATFATLV ATYEKGFLLI LEPFESDTAE VPNPVLHFTC LDAAIAIKPV FDRFSSVVIT SGTMSPLEMY PKMLDFPTVV QESYSMTLAR RSFLPMIVTR GSDQASISTS FQVRNEPSVV RNYGSLLTEF AKITPDGLVV FFPSYLYMES IISMWQGMGI LDEVWKYKLI LVETPDAQET SLALETYRTA CCNGRGAVLL CVARGKVSEG IDFDHQYGRT VLCIGVPFQY TESRILKARL EFLRETYRIR ENDFLSFDAM RHAAQCLGRV LRGKDDYGLM VLADRRFQKK RAQLPKWINQ ALLDADVNLS TDMAVSSARR FLRTMAQPFR AKDQEGISTW SMDDLPSAPG EDGTRTASKE LAGGAGAGAE PRAGRPGGGA ERARERLRDG RR // ID Q2UCR0_ASPOR Unreviewed; 794 AA. AC Q2UCR0; DT 24-JAN-2006, integrated into UniProtKB/TrEMBL. DT 24-JAN-2006, sequence version 1. DT 11-MAY-2016, entry version 65. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:BAE60655.1}; GN ORFNames=AO090012000485 {ECO:0000313|EMBL:BAE60655.1}; OS Aspergillus oryzae (strain ATCC 42149 / RIB 40) (Yellow koji mold). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; OC Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus. OX NCBI_TaxID=510516 {ECO:0000313|EMBL:BAE60655.1, ECO:0000313|Proteomes:UP000006564}; RN [1] {ECO:0000313|EMBL:BAE60655.1, ECO:0000313|Proteomes:UP000006564} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 42149 / RIB 40 {ECO:0000313|Proteomes:UP000006564}; RX PubMed=16372010; DOI=10.1038/nature04300; RA Machida M., Asai K., Sano M., Tanaka T., Kumagai T., Terai G., RA Kusumoto K., Arima T., Akita O., Kashiwagi Y., Abe K., Gomi K., RA Horiuchi H., Kitamoto K., Kobayashi T., Takeuchi M., Denning D.W., RA Galagan J.E., Nierman W.C., Yu J., Archer D.B., Bennett J.W., RA Bhatnagar D., Cleveland T.E., Fedorova N.D., Gotoh O., Horikawa H., RA Hosoyama A., Ichinomiya M., Igarashi R., Iwashita K., Juvvadi P.R., RA Kato M., Kato Y., Kin T., Kokubun A., Maeda H., Maeyama N., RA Maruyama J., Nagasaki H., Nakajima T., Oda K., Okada K., Paulsen I., RA Sakamoto K., Sawano T., Takahashi M., Takase K., Terabayashi Y., RA Wortman J., Yamada O., Yamagata Y., Anazawa H., Hata Y., Koide Y., RA Komori T., Koyama Y., Minetoki T., Suharnan S., Tanaka A., Isono K., RA Kuhara S., Ogasawara N., Kikuchi H.; RT "Genome sequencing and analysis of Aspergillus oryzae."; RL Nature 438:1157-1161(2005). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AP007161; BAE60655.1; -; Genomic_DNA. DR RefSeq; XP_001727494.1; XM_001727442.2. DR ProteinModelPortal; Q2UCR0; -. DR EnsemblFungi; CADAORAT00006060; CADAORAP00005945; CADAORAG00006060. DR GeneID; 5987968; -. DR KEGG; aor:AOR_1_846194; -. DR EuPathDB; FungiDB:AO090012000485; -. DR HOGENOM; HOG000205390; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000006564; Chromosome 4. DR GO; GO:0000439; C:core TFIIH complex; IEA:EnsemblFungi. DR GO; GO:0005675; C:holo TFIIH complex; IEA:EnsemblFungi. DR GO; GO:0000112; C:nucleotide-excision repair factor 3 complex; IEA:EnsemblFungi. DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:EnsemblFungi. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0043141; F:ATP-dependent 5'-3' DNA helicase activity; IEA:EnsemblFungi. DR GO; GO:0003684; F:damaged DNA binding; IEA:EnsemblFungi. DR GO; GO:0033683; P:nucleotide-excision repair, DNA incision; IEA:EnsemblFungi. DR GO; GO:0070816; P:phosphorylation of RNA polymerase II C-terminal domain; IEA:EnsemblFungi. DR GO; GO:0045951; P:positive regulation of mitotic recombination; IEA:EnsemblFungi. DR GO; GO:0010525; P:regulation of transposition, RNA-mediated; IEA:EnsemblFungi. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:EnsemblFungi. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000006564}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000006564}. FT DOMAIN 7 283 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 248 275 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 794 AA; 90482 MW; 919C5870DADF3594 CRC64; MKFFIDDLPV LFPYPRIYPE QYAYMCDLKK TLDAGGHCVL EMPSGTGKTV SLLSLIVAYQ MHYPEHRKLI YCSRTMSEIE KALAELKALM KFRTQQLGYT EDFRALGLTS RKNLCLHPSV KREKSGTIVD ARCRSLTAGF VKEKKERGED VELCVYHENL DLLEPHNLVP PGVFTLDGLL KYGEDHKQCP YFSARRMMPF CNVIIYSYHY LLDPKIAERV SREFSKDCIV VFDEAHNIDN VCIESLSIDI TENSLRKATR GANNLERKIN EMKSSDAEKL QSEYSKLVEG LREAEQAREE DQFISNPVLP DDLLKEAVPG NIRRAEHFIS FLKRFIEYLK TRMKVTHTIS ETPPSFLTHV KDLTYIERKP LRFCAERLTS LVRTLELINI EDYQPLQEVA TFATLVSTYD KGFLLILEPF ESEAATVPNP VLHFTCLDAA IAIKPVFERF SSVIITSGTL SPLEMYPKML GFTTVMQESY SMTLARRSFL PMVVTRGSDQ AQISSSFQIR NDPGVVRNYG NIVLEFSRIT PDGIVVFFPS YLYMESIISM WQGMGILDSI WNYKLILVET PDAQESSLAL ETYRTACCNG RGAILMCVAR GKVSEGIDFD HHYGRAVICI GVPFQYTESR ILKARLEFLR ENYRIRENDF LSFDAMRHAA QCLGRVLRGK DDYGVMVLAD KRFQKKRTQL PKWISQAMLE SETNLSTDMA VATAKNFLRG MAQPFKAKDQ DGISTWSLAD LERHREKQML EEERARRQAL ANGHGANGVA NGAAAAADEF DDDIDDDLMM LDAQ // ID Q4CMV3_TRYCC Unreviewed; 452 AA. AC Q4CMV3; DT 13-SEP-2005, integrated into UniProtKB/TrEMBL. DT 13-SEP-2005, sequence version 1. DT 11-MAY-2016, entry version 45. DE SubName: Full=TFIIH basal transcription factor complex helicase subunit, putative {ECO:0000313|EMBL:EAN81603.1}; DE EC=3.6.1.- {ECO:0000313|EMBL:EAN81603.1}; DE Flags: Fragment; GN ORFNames=Tc00.1047053511897.10 {ECO:0000313|EMBL:EAN81603.1}; OS Trypanosoma cruzi (strain CL Brener). OC Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Trypanosoma; OC Schizotrypanum. OX NCBI_TaxID=353153 {ECO:0000313|Proteomes:UP000002296}; RN [1] {ECO:0000313|EMBL:EAN81603.1, ECO:0000313|Proteomes:UP000002296} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=CL Brener {ECO:0000313|EMBL:EAN81603.1, RC ECO:0000313|Proteomes:UP000002296}; RX PubMed=16020725; DOI=10.1126/science.1112631; RA El-Sayed N.M., Myler P.J., Bartholomeu D.C., Nilsson D., Aggarwal G., RA Tran A.N., Ghedin E., Worthey E.A., Delcher A.L., Blandin G., RA Westenberger S.J., Caler E., Cerqueira G.C., Branche C., Haas B., RA Anupama A., Arner E., Aslund L., Attipoe P., Bontempi E., Bringaud F., RA Burton P., Cadag E., Campbell D.A., Carrington M., Crabtree J., RA Darban H., da Silveira J.F., de Jong P., Edwards K., Englund P.T., RA Fazelina G., Feldblyum T., Ferella M., Frasch A.C., Gull K., Horn D., RA Hou L., Huang Y., Kindlund E., Klingbeil M., Kluge S., Koo H., RA Lacerda D., Levin M.J., Lorenzi H., Louie T., Machado C.R., RA McCulloch R., McKenna A., Mizuno Y., Mottram J.C., Nelson S., RA Ochaya S., Osoegawa K., Pai G., Parsons M., Pentony M., Pettersson U., RA Pop M., Ramirez J.L., Rinta J., Robertson L., Salzberg S.L., RA Sanchez D.O., Seyler A., Sharma R., Shetty J., Simpson A.J., Sisk E., RA Tammi M.T., Tarleton R., Teixeira S., Van Aken S., Vogt C., Ward P.N., RA Wickstead B., Wortman J., White O., Fraser C.M., Stuart K.D., RA Andersson B.; RT "The genome sequence of Trypanosoma cruzi, etiologic agent of Chagas RT disease."; RL Science 309:409-415(2005). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00051130}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00556201}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00051146}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:EAN81603.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AAHK01003229; EAN81603.1; -; Genomic_DNA. DR RefSeq; XP_803049.1; XM_797956.1. DR ProteinModelPortal; Q4CMV3; -. DR STRING; 353153.XP_803049.1; -. DR PaxDb; Q4CMV3; -. DR EnsemblProtists; EAN81603; EAN81603; Tc00.1047053511897.10. DR GeneID; 3532568; -. DR KEGG; tcr:511897.10; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR KO; K10844; -. DR Proteomes; UP000002296; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00491; HELICc2; 1. DR TIGRFAMs; TIGR00604; rad3; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00442371, KW ECO:0000313|EMBL:EAN81603.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000002296}; KW Helicase {ECO:0000256|SAAS:SAAS00442371, ECO:0000313|EMBL:EAN81603.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00442371, KW ECO:0000313|EMBL:EAN81603.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00442371, KW ECO:0000313|EMBL:EAN81603.1}; Nucleus {ECO:0000256|SAAS:SAAS00442313}; KW Reference proteome {ECO:0000313|Proteomes:UP000002296}. FT DOMAIN 201 345 HELICc2. {ECO:0000259|SMART:SM00491}. FT NON_TER 1 1 {ECO:0000313|EMBL:EAN81603.1}. SQ SEQUENCE 452 AA; 51269 MW; 67A81EA569FFA8AD CRC64; LSKVRDECAV DIRHFRYLTE RLKVLMNTLQ ITNSHKFRNV SLIAQMYMTL STHYTDDRYE KPGFVVVCEA HDPTRPAVPD PVIRLVCVDA SLALREAFSK YRSVVLTSGT LSPLDIYPKI LGFTPVIAKS FQMTLSRKCI APVVVTRSTE SVNITMEEIT SSFVVRTNPL AQDIVSSAYE DLLRGLGKTV PDGIVCFFTG YQYMGEVLLG WHRSGFLKEL AQYKLIFIET QSVEETSIAL ANYRRACDIG RGAIFMAIAR GKIAEGIDFD RHYGRAVVMF GVPFLPPNDE PLRQRICWME TCLGIPGNEY RNFDAMRQAS QCIGRVLRNK TDYGMMLLVD RRFALNDKRK KLPIWIQQCL KENTNLSVDA AIAVARGFFK EMAQPWEHKK DLGTTLFSKE TLALKGFLKP SKRSFPCRVT EKCSNSAEEL VHGEGDAIRA VKEPEHRKRL RG // ID Q4CZ36_TRYCC Unreviewed; 804 AA. AC Q4CZ36; DT 13-SEP-2005, integrated into UniProtKB/TrEMBL. DT 13-SEP-2005, sequence version 1. DT 11-MAY-2016, entry version 54. DE SubName: Full=TFIIH basal transcription factor complex helicase subunit, putative {ECO:0000313|EMBL:EAN85535.1}; DE EC=3.6.1.- {ECO:0000313|EMBL:EAN85535.1}; GN ORFNames=Tc00.1047053511075.30 {ECO:0000313|EMBL:EAN85535.1}; OS Trypanosoma cruzi (strain CL Brener). OC Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Trypanosoma; OC Schizotrypanum. OX NCBI_TaxID=353153 {ECO:0000313|Proteomes:UP000002296}; RN [1] {ECO:0000313|EMBL:EAN85535.1, ECO:0000313|Proteomes:UP000002296} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=CL Brener {ECO:0000313|EMBL:EAN85535.1, RC ECO:0000313|Proteomes:UP000002296}; RX PubMed=16020725; DOI=10.1126/science.1112631; RA El-Sayed N.M., Myler P.J., Bartholomeu D.C., Nilsson D., Aggarwal G., RA Tran A.N., Ghedin E., Worthey E.A., Delcher A.L., Blandin G., RA Westenberger S.J., Caler E., Cerqueira G.C., Branche C., Haas B., RA Anupama A., Arner E., Aslund L., Attipoe P., Bontempi E., Bringaud F., RA Burton P., Cadag E., Campbell D.A., Carrington M., Crabtree J., RA Darban H., da Silveira J.F., de Jong P., Edwards K., Englund P.T., RA Fazelina G., Feldblyum T., Ferella M., Frasch A.C., Gull K., Horn D., RA Hou L., Huang Y., Kindlund E., Klingbeil M., Kluge S., Koo H., RA Lacerda D., Levin M.J., Lorenzi H., Louie T., Machado C.R., RA McCulloch R., McKenna A., Mizuno Y., Mottram J.C., Nelson S., RA Ochaya S., Osoegawa K., Pai G., Parsons M., Pentony M., Pettersson U., RA Pop M., Ramirez J.L., Rinta J., Robertson L., Salzberg S.L., RA Sanchez D.O., Seyler A., Sharma R., Shetty J., Simpson A.J., Sisk E., RA Tammi M.T., Tarleton R., Teixeira S., Van Aken S., Vogt C., Ward P.N., RA Wickstead B., Wortman J., White O., Fraser C.M., Stuart K.D., RA Andersson B.; RT "The genome sequence of Trypanosoma cruzi, etiologic agent of Chagas RT disease."; RL Science 309:409-415(2005). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:EAN85535.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AAHK01001405; EAN85535.1; -; Genomic_DNA. DR RefSeq; XP_807386.1; XM_802293.1. DR ProteinModelPortal; Q4CZ36; -. DR STRING; 353153.XP_807386.1; -. DR PaxDb; Q4CZ36; -. DR EnsemblProtists; EAN85535; EAN85535; Tc00.1047053511075.30. DR GeneID; 3537600; -. DR KEGG; tcr:511075.30; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR KO; K10844; -. DR Proteomes; UP000002296; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 5. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EAN85535.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000002296}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EAN85535.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EAN85535.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EAN85535.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000002296}. FT DOMAIN 7 276 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 804 AA; 91325 MW; 5EB4A2BE227C30AE CRC64; MRLFIEDVLV LFPYEYIYPE QLEYMTELKK GLDQGGHIVL EMPSGTGKTT TLLSLLIAYI HYHADEKRKV IYCTRTVEEM TKTMGELRKL LELWNTDELG SNRPLRGLCL TAKKNLCIES TVASQRYPED VDAGCRSLTA PWQTSNRCAY FDNLERIPFE LPPGAYSVED LKQFGEAHQL CPYYLVRKAL RVVDIVVHSF LYIVDPIVAE VTKGYFNENA IVVMDEGHNV DDVCIEAMSL IITKEDAAQA KENVKLLNAA ADHLKATNRQ QLQDEYDRLV NGLAMVEMAR SVDSMMMPVQ APSIPSEIAE EAIPGSLRQA NHFLSFIQRL VDFTHRVVCR ISRTYVADPL TFLSKVRDEC AVDIRHFRYL TERLKVLMNT LQITNSHKFR NVSLIAQMYM TLSTHYTDDR YEKPGFVVVC EAHDPTRPAV PDPVIRLVCV DASLALREAF SKYRSVVLTS GTLSPLDIYP KILGFTPVIA KSFQMTLSRK CIAPVVVTRS TESVNITMEE ITSSFVVRTN PLAQDIVSSA YEDLLRGLGK TVPDGIVCFF TGYQYMGEVL LGWHRSGFLK ELAQYKLIFI ETQSVEETSI ALANYRRACD IGRGAIFMAI ARGKIAEGID FDRHYGRAVV MFGVPFLPPN DEPLRQRIYW METCLGIPGN EYRNFDAMRQ ASQCIGRVLR NKTDYGMMLL VDRRFALNDK RKKLPIWIQQ CLKENTNLSV DAAIAVARGF FKEMAQPWEH KRDLGTTLFS KETLALKGFL KPSKRSVPCR VTEKCSNSAE ELVHGEGDVI RAVKEPEHRK RLRG // ID Q4N9F9_THEPA Unreviewed; 894 AA. AC Q4N9F9; DT 02-AUG-2005, integrated into UniProtKB/TrEMBL. DT 02-AUG-2005, sequence version 1. DT 11-MAY-2016, entry version 65. DE SubName: Full=DNA repair protein rad3, putative {ECO:0000313|EMBL:EAN33399.1}; GN OrderedLocusNames=TP01_0155 {ECO:0000313|EMBL:EAN33399.1}; OS Theileria parva (East coast fever infection agent). OC Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Piroplasmida; OC Theileriidae; Theileria. OX NCBI_TaxID=5875 {ECO:0000313|EMBL:EAN33399.1, ECO:0000313|Proteomes:UP000001949}; RN [1] {ECO:0000313|EMBL:EAN33399.1, ECO:0000313|Proteomes:UP000001949} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Muguga {ECO:0000313|EMBL:EAN33399.1, RC ECO:0000313|Proteomes:UP000001949}; RX PubMed=15994558; DOI=10.1126/science.1110439; RA Gardner M.J., Bishop R., Shah T., de Villiers E.P., Carlton J.M., RA Hall N., Ren Q., Paulsen I.T., Pain A., Berriman M., Wilson R.J.M., RA Sato S., Ralph S.A., Mann D.J., Xiong Z., Shallom S.J., Weidman J., RA Jiang L., Lynn J., Weaver B., Shoaibi A., Domingo A.R., Wasawo D., RA Crabtree J., Wortman J.R., Haas B., Angiuoli S.V., Creasy T.H., Lu C., RA Suh B., Silva J.C., Utterback T.R., Feldblyum T.V., Pertea M., RA Allen J., Nierman W.C., Taracha E.L.N., Salzberg S.L., White O.R., RA Fitzhugh H.A., Morzaria S., Venter J.C., Fraser C.M., Nene V.; RT "Genome sequence of Theileria parva, a bovine pathogen that transforms RT lymphocytes."; RL Science 309:134-137(2005). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:EAN33399.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AAGK01000001; EAN33399.1; -; Genomic_DNA. DR RefSeq; XP_765682.1; XM_760589.1. DR ProteinModelPortal; Q4N9F9; -. DR STRING; 333668.XP_765682.1; -. DR EnsemblProtists; EAN33399; EAN33399; TP01_0155. DR GeneID; 3502889; -. DR KEGG; tpv:TP01_0155; -. DR EuPathDB; PiroplasmaDB:TP01_0155; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR HOGENOM; HOG000205390; -. DR InParanoid; Q4N9F9; -. DR KO; K10844; -. DR Proteomes; UP000001949; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR006935; Helicase/UvrB_N. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR Pfam; PF04851; ResIII; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 2. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000001949}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000001949}. FT DOMAIN 8 409 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 380 407 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 894 AA; 102534 MW; 0839C53837134238 CRC64; MVRFWIDGIE VFFPYPKIYP EQIAYMKSLK TALDSKGHAV LEMPTGTGKT VALFSFVSSY QLARPELGKL VYCTRTIHEM EKALLELSEV ISYRNSQLNI HHSSSYGGSS SYKTNTNENP NSKDINSVKN INSVKEVKEE KKVKVKMELD VDGPKNGKIF DLKNYFLAVG LCSRRNLCIH PEVSSHADRT KIDEKCCDLT SVWRRMQFED LEDKKRNEYT LDYEGSRPIR RRPSASAVQE IPDIEEFNSM GLCGYYETME RIWNPTFIPS GVYTLEGLKE YCLKYKDSRT GRASPICPYF AARRAIDNAN IVVLNYQYLI DPKVSDAVFY HLCTENYLKE KREDKDSKPK LPIVVVFDEA HNIDNVCIEA LSVELSTETL DNAYSDLSRL EDNVRELRLR DQELLLEEYR RLVETTDFGS IDIEGYMNPV LRQDIVDRAI PGSIRKAEHF ISFLKVVIGY LKKYIKVKEA KSEGPLMFLY RFESQCKFKH LHNLHTIKFE HETGINSDVM EHTYNRMKSL LNTLKMTAVG DLTSLHLVVD FCTLVGTYYN GFIVIVDPFP KATSYDPLLQ FSCLDASIAM KSVIDNFQSV ILTSGTISPL EFYPKILNFT PVLMQSLPMS LDRDCLCPII VSKGANQVHM STKFDLRTDI TVLRNYGSLV IDLCKHIPDG VVCFFPSYAY MELILSHWYE TGILASIMEH KLVFMETKDS VTTTLALYNY RRACDVGRGA LFLSICRGKV AEGIDFNSHY GRCVILVGIP FQYTLSKVLK ARLDFMRCNY GILENEFITF DAIRQSAQCV GRVIRNKADF GLMVFADARY TRIDKKSKLP PWILKNMDPS NLFLTTETAV SVAKAFFRNM SQEYVPSKHT RMGQEILNDE QRCWATVQRV LNLK // ID Q4QAA2_LEIMA Unreviewed; 813 AA. AC Q4QAA2; DT 19-JUL-2005, integrated into UniProtKB/TrEMBL. DT 19-JUL-2005, sequence version 1. DT 11-MAY-2016, entry version 72. DE SubName: Full=Putative DNA excision repair protein {ECO:0000313|EMBL:CAJ05417.1}; DE EC=3.6.1.- {ECO:0000313|EMBL:CAJ05417.1}; GN ORFNames=LMJF_24_2280 {ECO:0000313|EMBL:CAJ05417.1}; OS Leishmania major. OC Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; OC Leishmaniinae; Leishmania. OX NCBI_TaxID=5664 {ECO:0000313|Proteomes:UP000000542}; RN [1] {ECO:0000313|EMBL:CAJ05417.1, ECO:0000313|Proteomes:UP000000542} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=MHOM/IL/81/Friedlin {ECO:0000313|Proteomes:UP000000542}; RX PubMed=16020728; DOI=10.1126/science.1112680; RA Ivens A.C., Peacock C.S., Worthey E.A., Murphy L., Aggarwal G., RA Berriman M., Sisk E., Rajandream M.A., Adlem E., Aert R., Anupama A., RA Apostolou Z., Attipoe P., Bason N., Bauser C., Beck A., Beverley S.M., RA Bianchettin G., Borzym K., Bothe G., Bruschi C.V., Collins M., RA Cadag E., Ciarloni L., Clayton C., Coulson R.M., Cronin A., Cruz A.K., RA Davies R.M., De Gaudenzi J., Dobson D.E., Duesterhoeft A., RA Fazelina G., Fosker N., Frasch A.C., Fraser A., Fuchs M., Gabel C., RA Goble A., Goffeau A., Harris D., Hertz-Fowler C., Hilbert H., Horn D., RA Huang Y., Klages S., Knights A., Kube M., Larke N., Litvin L., RA Lord A., Louie T., Marra M., Masuy D., Matthews K., Michaeli S., RA Mottram J.C., Muller-Auer S., Munden H., Nelson S., Norbertczak H., RA Oliver K., O'neil S., Pentony M., Pohl T.M., Price C., Purnelle B., RA Quail M.A., Rabbinowitsch E., Reinhardt R., Rieger M., Rinta J., RA Robben J., Robertson L., Ruiz J.C., Rutter S., Saunders D., RA Schafer M., Schein J., Schwartz D.C., Seeger K., Seyler A., Sharp S., RA Shin H., Sivam D., Squares R., Squares S., Tosato V., Vogt C., RA Volckaert G., Wambutt R., Warren T., Wedler H., Woodward J., Zhou S., RA Zimmermann W., Smith D.F., Blackwell J.M., Stuart K.D., Barrell B., RA Myler P.J.; RT "The genome of the kinetoplastid parasite, Leishmania major."; RL Science 309:436-442(2005). RN [2] {ECO:0000313|EMBL:CAJ05417.1, ECO:0000313|Proteomes:UP000000542} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=MHOM/IL/81/Friedlin {ECO:0000313|Proteomes:UP000000542}; RX PubMed=22038252; DOI=10.1101/gr.122945.111; RA Rogers M.B., Hilley J.D., Dickens N.J., Wilkes J., Bates P.A., RA Depledge D.P., Harris D., Her Y., Herzyk P., Imamura H., Otto T.D., RA Sanders M., Seeger K., Dujardin J.C., Berriman M., Smith D.F., RA Hertz-Fowler C., Mottram J.C.; RT "Chromosome and gene copy number variation allow major structural RT change between species and strains of Leishmania."; RL Genome Res. 21:2129-2142(2011). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FR796420; CAJ05417.1; -; Genomic_DNA. DR RefSeq; XP_001683746.1; XM_001683694.1. DR ProteinModelPortal; Q4QAA2; -. DR STRING; 5664.LmjF.24.2280; -. DR EnsemblProtists; LmjF.24.2280:mRNA; LmjF.24.2280:pep; LmjF.24.2280. DR GeneID; 5652402; -. DR KEGG; lma:LMJF_24_2280; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR HOGENOM; HOG000205390; -. DR InParanoid; Q4QAA2; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR Proteomes; UP000000542; Chromosome 24. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000000542}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000000542}. FT DOMAIN 7 275 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 246 288 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 813 AA; 91744 MW; 3AEA982E2A91A2EE CRC64; MKLYVEDVLV VFPYEYIYPE QLDYITELKR GLDKGGHMVL EMPSGTGKTI SLLSILVAYL HHHAHEKRKV VYCTRTVEEM VKTMGEMRKL LKHWEAEGEQ LRPLRGLCLS AKKNLCIETS VASRIHPDEV DAGCRSITAP WQQERRCGYY DTLAQAPLEL PPGVHSLDDL KDFGEQHHVC PYYLVRKALP IVDIIVHSYL YMVDPVVSEV TKEFLNENTI VVMDEGHNVD DVCIEAMSLI LTKKDSLDAK ENMKDLNKEL DHLKATNRQQ LQNEYDRLVN GLAMAEMARD PEQRALVEAP AIPANVAEGA IPASLRQANH FLAFMQRLVD FTHRIVARIT RTYVADPLTF LTKLKEECAL EISHFRYLSG RLKVLLTTLQ IANAGKYRPV ALIAQMYTLL SMHYTDDRYE KPGFVVVCEA FDPTRPQIPD PVIRTVCVDA SLALRDTFAR HRSVILTSGT LSPMDIYPKI LGFTPAISKS FQMTLSRKCI APVIVTRSSE SVNITAEEVT SSFKVRTNPT AQALVTSAYE SLLLELAKTV PDGMVCFFTG YQYMGEVLLA WHSSGFLQKL AKHKLIFVET QGVEETSVAL ANYRRACDIG RGAIFMSIAR GKIAEGIDFD RHYGRAVVMF GVPFLPPNDE PLRQRMHWME VCLGISESEF RNFDAMRQAS QCIGRVLRNK TDYGMMLLVD KRFALNDKVK KIPRWIAQCL KNNTNLSVDA AVAVARGFFK EMAQPWEHEK DLGTTLLSKE TLRRMGRLSA SAAKYASFSE TLAAENVSTV TAPKTEQEEN VGITAVREPG SGSRKRKRDD EME // ID Q4UGA8_THEAN Unreviewed; 894 AA. AC Q4UGA8; DT 05-JUL-2005, integrated into UniProtKB/TrEMBL. DT 05-JUL-2005, sequence version 1. DT 11-MAY-2016, entry version 64. DE SubName: Full=Rad3-like DNA helicase-related, putative {ECO:0000313|EMBL:CAI73881.1}; GN ORFNames=TA19155 {ECO:0000313|EMBL:CAI73881.1}; OS Theileria annulata. OC Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Piroplasmida; OC Theileriidae; Theileria. OX NCBI_TaxID=5874 {ECO:0000313|EMBL:CAI73881.1, ECO:0000313|Proteomes:UP000001950}; RN [1] {ECO:0000313|EMBL:CAI73881.1, ECO:0000313|Proteomes:UP000001950} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Ankara {ECO:0000313|Proteomes:UP000001950}; RX PubMed=15994557; DOI=10.1126/science.1110418; RA Pain A., Renauld H., Berriman M., Murphy L., Yeats C.A., Weir W., RA Kerhornou A., Aslett M., Bishop R., Bouchier C., Cochet M., RA Coulson R.M.R., Cronin A., de Villiers E.P., Fraser A., Fosker N., RA Gardner M., Goble A., Griffiths-Jones S., Harris D.E., Katzer F., RA Larke N., Lord A., Maser P., McKellar S., Mooney P., Morton F., RA Nene V., O'Neil S., Price C., Quail M.A., Rabbinowitsch E., RA Rawlings N.D., Rutter S., Saunders D., Seeger K., Shah T., Squares R., RA Squares S., Tivey A., Walker A.R., Woodward J., Dobbelaere D.A.E., RA Langsley G., Rajandream M.A., McKeever D., Shiels B., Tait A., RA Barrell B.G., Hall N.; RT "Genome of the host-cell transforming parasite Theileria annulata RT compared with T. parva."; RL Science 309:131-133(2005). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CR940347; CAI73881.1; -; Genomic_DNA. DR RefSeq; XP_954558.1; XM_949465.1. DR ProteinModelPortal; Q4UGA8; -. DR STRING; 353154.XP_954558.1; -. DR EnsemblProtists; CAI73881; CAI73881; TA19155. DR GeneID; 3863781; -. DR KEGG; tan:TA19155; -. DR EuPathDB; PiroplasmaDB:TA19155; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR HOGENOM; HOG000205390; -. DR InParanoid; Q4UGA8; -. DR KO; K10844; -. DR Proteomes; UP000001950; Chromosome 1 part 1. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 5. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CAI73881.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000001950}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:CAI73881.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CAI73881.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CAI73881.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000001950}. FT DOMAIN 8 428 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 399 426 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 894 AA; 102723 MW; F39EDCE3CA1247C4 CRC64; MVRFWIEGIE VYFPYPKIYP EQIAYMKSLK NVLDSKGHAV LEMPTGTGKT VALFSFVSSY QLAKPELGKL VYCTRTIHEM EKALNELSVV ISYRNSQLNI DHSSTYEGSN SYKTSNNMNE TNQNYIKNIN SVKHMKEEKN VKIKVEQDVE TPQNDHFLAV GLCSRRNLCI HPEVSSQADR TKIDEKCIFH FHTPVEYYRY LVMPILIFIV KVYIGCDLTS IWRRMQFEDL EDTKRNEHTL EYEGSKPIKI KPSASAVQEI PDIEEFNSMG LCGYYETIER IWNPTFMPSG VYTLEGLKEY CLNFKDPRTG RPSPICPYFA ARRAIDDANI VVLNYQYLID PKVSDAVFYH LCTESYLKEK RDDKDSKPKL PIVVVFDEAH NIDNVCIEAL SVELSTETLD NAYSDLSRLE NSVRELRLRD EELLLEEYRR LVETTDFGSA DIEGYMNPLL RQDIVDRVMP GSIRKAEHFI SFLKVVIGYL KKYIKVKEPK SEGPLMFLYR FQNETGIISD VFQHTYNRFK SLLNTLKMTV GNLTALHLVI DFCSLVGTYY KGFIIIVDPF PKSAAYDPVI QFSCLDASVA MKPVLENFQS VILTSGTMSP LEFYPKILNF SPILTQSLPM SLDRECLCPI IVSKGDNQVH MTTKFDLRKD ITLLRNYGSL VIELCKSIPD GVVCFFPSYA YMELILSHWY ETGILSSIMS HKLVFIETKE SISTSLALHN YRRACDAGRG GLFLSVCRGK VAEGIDFDMH YGRCVILIGI PFQYTLSRTL KARLDFMRCN YGILESEFIT FDAMRQAAQC IGRVIRNKGD YGLMVLADSR YTRVGKRSKL PVWILKRLDL GNFYLTCESA SSIGKAFIRR MSQEYISTKR TKFGQTTLNN EKLYWSTVKS ILDL // ID Q4WS59_ASPFU Unreviewed; 770 AA. AC Q4WS59; DT 05-JUL-2005, integrated into UniProtKB/TrEMBL. DT 05-JUL-2005, sequence version 1. DT 11-MAY-2016, entry version 75. DE SubName: Full=TFIIH complex helicase Rad3, putative {ECO:0000313|EMBL:EAL90723.1}; DE EC=3.6.1.- {ECO:0000313|EMBL:EAL90723.1}; GN ORFNames=AFUA_1G13910 {ECO:0000313|EMBL:EAL90723.1}; OS Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC OS A1100) (Aspergillus fumigatus). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; OC Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus. OX NCBI_TaxID=330879 {ECO:0000313|EMBL:EAL90723.1, ECO:0000313|Proteomes:UP000002530}; RN [1] {ECO:0000313|EMBL:EAL90723.1, ECO:0000313|Proteomes:UP000002530} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100 RC {ECO:0000313|Proteomes:UP000002530}; RX PubMed=16372009; DOI=10.1038/nature04332; RA Nierman W.C., Pain A., Anderson M.J., Wortman J.R., Kim H.S., RA Arroyo J., Berriman M., Abe K., Archer D.B., Bermejo C., Bennett J., RA Bowyer P., Chen D., Collins M., Coulsen R., Davies R., Dyer P.S., RA Farman M., Fedorova N., Fedorova N., Feldblyum T.V., Fischer R., RA Fosker N., Fraser A., Garcia J.L., Garcia M.J., Goble A., RA Goldman G.H., Gomi K., Griffith-Jones S., Gwilliam R., Haas B., RA Haas H., Harris D., Horiuchi H., Huang J., Humphray S., Jimenez J., RA Keller N., Khouri H., Kitamoto K., Kobayashi T., Konzack S., RA Kulkarni R., Kumagai T., Lafon A., Latge J.P., Li W., Lord A., Lu C., RA Majoros W.H., May G.S., Miller B.L., Mohamoud Y., Molina M., Monod M., RA Mouyna I., Mulligan S., Murphy L., O'Neil S., Paulsen I., RA Penalva M.A., Pertea M., Price C., Pritchard B.L., Quail M.A., RA Rabbinowitsch E., Rawlins N., Rajandream M.A., Reichard U., RA Renauld H., Robson G.D., Rodriguez de Cordoba S., Rodriguez-Pena J.M., RA Ronning C.M., Rutter S., Salzberg S.L., Sanchez M., RA Sanchez-Ferrero J.C., Saunders D., Seeger K., Squares R., Squares S., RA Takeuchi M., Tekaia F., Turner G., Vazquez de Aldana C.R., Weidman J., RA White O., Woodward J., Yu J.H., Fraser C., Galagan J.E., Asai K., RA Machida M., Hall N., Barrell B., Denning D.W.; RT "Genomic sequence of the pathogenic and allergenic filamentous fungus RT Aspergillus fumigatus."; RL Nature 438:1151-1156(2005). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:EAL90723.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AAHF01000004; EAL90723.1; -; Genomic_DNA. DR RefSeq; XP_752761.1; XM_747668.1. DR ProteinModelPortal; Q4WS59; -. DR EnsemblFungi; CADAFUAT00007167; CADAFUAP00007167; CADAFUAG00007167. DR GeneID; 3510302; -. DR KEGG; afm:AFUA_1G13910; -. DR EuPathDB; FungiDB:Afu1g13910; -. DR HOGENOM; HOG000205390; -. DR InParanoid; Q4WS59; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000002530; Chromosome 1. DR GO; GO:0000439; C:core TFIIH complex; IEA:EnsemblFungi. DR GO; GO:0005829; C:cytosol; IEA:EnsemblFungi. DR GO; GO:0005675; C:holo TFIIH complex; IEA:EnsemblFungi. DR GO; GO:0000112; C:nucleotide-excision repair factor 3 complex; IEA:EnsemblFungi. DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:EnsemblFungi. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0043141; F:ATP-dependent 5'-3' DNA helicase activity; IEA:EnsemblFungi. DR GO; GO:0003684; F:damaged DNA binding; IEA:EnsemblFungi. DR GO; GO:0000717; P:nucleotide-excision repair, DNA duplex unwinding; IEA:EnsemblFungi. DR GO; GO:0033683; P:nucleotide-excision repair, DNA incision; IEA:EnsemblFungi. DR GO; GO:0070816; P:phosphorylation of RNA polymerase II C-terminal domain; IEA:EnsemblFungi. DR GO; GO:0045951; P:positive regulation of mitotic recombination; IEA:EnsemblFungi. DR GO; GO:0010525; P:regulation of transposition, RNA-mediated; IEA:EnsemblFungi. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:EnsemblFungi. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EAL90723.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000002530}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EAL90723.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EAL90723.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EAL90723.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000002530}. FT DOMAIN 1 259 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 224 251 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 770 AA; 87761 MW; 417035950D232A84 CRC64; MCDLKKTLDA GGHCVLEMPS GTGKTVSLLS LIIAYQQHYP EHRKLIYCSR TMSEIEKALA ELKELMKFRS QQLGYTEDFR ALGLTSRKNL CLHPSVKREK SGTVVDARCR SLTAGFVKEK KERGEDVELC IYHENLDLLE PHNLVPPGVF TLDGLLKYGE EHKQCPYFSA RRMMPYCNVI IYSYHYLLDP KIAERVSREL SKDCIVVFDE AHNIDNVCIE ALSIDITEDS LRKATRGANN LERKISEMKS SDAEKLQNEY SKLVEGLREA EQARDEDQFI ANPVLPDDLL KEAVPGNIRR AEHFVAFLKR FIEYLKTRMK VTHTISETPP SFLTHVKDLT FIERKPLRFC AERLTSLVRT LELINIEDYQ PLQEVATFAT LVSTYDKGFL LILEPFESET ATVPNPVLHF TCLDAAIAIK PVFDRFSSVI ITSGTLSPLE MYPKMLGFPT VLQESYTMTL ARRSFLPMIV TRGSDQAQIS SSFQIRNDPG VVRNYGNIVL EFSRITPDGI VVFFPSYLYM ESIISMWQGM GILDSIWNYK LILVETPDAQ ESSLALETYR TACCNGRGAI LFCVARGKVS EGIDFDHHYG RAVLCIGVPF QYTESRILKA RLEFLRENYR IRENDFLSFD AMRHAAQCLG RVLRGKDDYG IMVLADRRFQ KKRNQLPKWI SQAMLESETN LSTDMAVATA KNFLRTMAQP FKAKDQEGIS TWSLADIERH REKQMLEEER VRREAVANGR ATNGTHNGAS AAADEFDDDI DEDLMMLDAQ // ID Q4XY88_PLACH Unreviewed; 970 AA. AC Q4XY88; DT 05-JUL-2005, integrated into UniProtKB/TrEMBL. DT 05-JUL-2005, sequence version 1. DT 11-MAY-2016, entry version 58. DE SubName: Full=DNA excision-repair helicase, putative {ECO:0000313|EMBL:CAH78123.1}; GN ORFNames=PC000801.02.0 {ECO:0000313|EMBL:CAH78123.1}; OS Plasmodium chabaudi. OC Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; OC Plasmodiidae; Plasmodium; Plasmodium (Vinckeia). OX NCBI_TaxID=5825 {ECO:0000313|Proteomes:UP000002509}; RN [1] {ECO:0000313|EMBL:CAH78123.1, ECO:0000313|Proteomes:UP000002509} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=AS {ECO:0000313|Proteomes:UP000002509}; RX PubMed=15637271; DOI=10.1126/science.1103717; RA Hall N., Karras M., Raine J.D., Carlton J.M., Kooij T.W.A., RA Berriman M., Florens L., Janssen C.S., Pain A., Christophides G.K., RA James K., Rutherford K., Harris B., Harris D., Churcher C.M., RA Quail M.A., Ormond D., Doggett J., Trueman H.E., Mendoza J., RA Bidwell S.L., Rajandream M.A., Carucci D.J., Yates J.R. III, RA Kafatos F.C., Janse C.J., Barrell B.G., Turner C.M.R., Waters A.P., RA Sinden R.S.; RT "A comprehensive survey of the Plasmodium life cycle by genomic, RT transcriptomic, and proteomic analyses."; RL Science 307:82-86(2005). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CAAJ01002307; CAH78123.1; -; Genomic_DNA. DR RefSeq; XP_745573.1; XM_740480.1. DR ProteinModelPortal; Q4XY88; -. DR STRING; 5825.PCHAS_083520; -. DR EnsemblProtists; CAH78123; CAH78123; PC000801.02.0. DR GeneID; 3498697; -. DR KEGG; pcb:PC000801.02.0; -. DR EuPathDB; PlasmoDB:PCHAS_0835200; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR HOGENOM; HOG000205390; -. DR InParanoid; Q4XY88; -. DR KO; K10844; -. DR Proteomes; UP000002509; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR006935; Helicase/UvrB_N. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR Pfam; PF04851; ResIII; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 2. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CAH78123.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000002509}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:CAH78123.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CAH78123.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CAH78123.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000002509}. FT DOMAIN 8 381 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 970 AA; 112715 MW; 63B6AA590114BE93 CRC64; MVVFYLDDLE IFFPYDYIYP EQYAYMKYLK TLDSEGHCVL EMPTGTGKTV AIFSLITSYQ YYKNDDSKFI FCTRTVAEME KSLIELKKVI NYRINIIKKR NEISEQIVKT DIKEDSDMIR NEYKNEEDDN AWNRFGRNSE ILAMGISARR CMCVNEKVLL KHEREKIDEE CRKLTATFVR EKKYISKKLN NYSNSNIDRI SDFIIKNKHH IDMEDYFSIY NSKNSISEYN DLGLCGYFEN YKKDFVYELI EPGVYTIEEL KTLCKNYKNR ENMNAPICPY FCAKKIIEIA KVIVLNYQYI IDPKVSKSIF LGKDINNRVN YKKNDIIVFD EAHNIDSVCL EALSVNIDRS ILNKASMNIT TLFKKIEKSR IVNEDKLREE CYKILKKIKS GKEEYNSMMN RNGEQMESIN SGNKQFNENK EDMFTQLSSG NGNNDDNLES QNKKNQQDEI YFDEEMNLVF RGLLGEEPNN REGDDVEKLT DKVIIDDLKK ILNIDSSDNV IKDKDKDKSN LEEINYSPLL MEDIIKNVVM PGNIRKSEHF LNLMRIVVVY LKKYINIYEV TSEGPLSFLY KCEKDTKLDT SFFKYSFDRL KSLLNALQVV DTDDYSALNV VCNFCTLIGN YFKGFIIICE PYPEATGIYD PVIQFACLDS SIAMKSVLNR YKSVVLTSGT ITPLELYPKL LNFSTVLTAS FPMSFDRNCV CPLIVTKSSD LIPLSSQYSL RNDLNVIKNY GFLLVEMCKN IPDGIISYFP SYIYMEHVMS TWYELGIISN ILEYKLIFIE TKDIVSTTIA LHNFKKCDLG KGAVFLSICR GKIAEGIDFD KHYGKCVILF GIPYQYTLSR ILKARLDFLK ETYNIQENEF LTFDAMRQAS QCVGRIIRNK KDYGIMIFSD IRYARNDKKG KLPPWIIKCM DVSNINLTIG AGVSISKKFL LNMSQEYKET DQTKISQVIL QNPSKCWDIV KSVLNMDDFI // ID Q4YTZ2_PLABA Unreviewed; 528 AA. AC Q4YTZ2; DT 05-JUL-2005, integrated into UniProtKB/TrEMBL. DT 05-JUL-2005, sequence version 1. DT 11-MAY-2016, entry version 52. DE SubName: Full=DNA excision-repair helicase, putative {ECO:0000313|EMBL:CAH98515.1}; DE Flags: Fragment; GN ORFNames=PB001131.02.0 {ECO:0000313|EMBL:CAH98515.1}; OS Plasmodium berghei (strain Anka). OC Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; OC Plasmodiidae; Plasmodium; Plasmodium (Vinckeia). OX NCBI_TaxID=5823 {ECO:0000313|Proteomes:UP000007720}; RN [1] {ECO:0000313|EMBL:CAH98515.1, ECO:0000313|Proteomes:UP000007720} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ANKA {ECO:0000313|Proteomes:UP000007720}; RX PubMed=15637271; DOI=10.1126/science.1103717; RA Hall N., Karras M., Raine J.D., Carlton J.M., Kooij T.W.A., RA Berriman M., Florens L., Janssen C.S., Pain A., Christophides G.K., RA James K., Rutherford K., Harris B., Harris D., Churcher C.M., RA Quail M.A., Ormond D., Doggett J., Trueman H.E., Mendoza J., RA Bidwell S.L., Rajandream M.A., Carucci D.J., Yates J.R. III, RA Kafatos F.C., Janse C.J., Barrell B.G., Turner C.M.R., Waters A.P., RA Sinden R.S.; RT "A comprehensive survey of the Plasmodium life cycle by genomic, RT transcriptomic, and proteomic analyses."; RL Science 307:82-86(2005). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00051130}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00556201}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00051146}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CAAI01002426; CAH98515.1; -; Genomic_DNA. DR RefSeq; XP_678555.1; XM_673463.1. DR EnsemblProtists; CAH98515; CAH98515; PB001131.02.0. DR GeneID; 3427135; -. DR KEGG; pbe:PB001131.02.0; -. DR EuPathDB; PlasmoDB:PBANKA_0834900; -. DR HOGENOM; HOG000205390; -. DR InParanoid; Q4YTZ2; -. DR KO; K10844; -. DR Proteomes; UP000007720; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00491; HELICc2; 1. DR TIGRFAMs; TIGR00604; rad3; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00442371, KW ECO:0000313|EMBL:CAH98515.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000007720}; KW Helicase {ECO:0000256|SAAS:SAAS00442371, ECO:0000313|EMBL:CAH98515.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00442371, KW ECO:0000313|EMBL:CAH98515.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00442371, KW ECO:0000313|EMBL:CAH98515.1}; Nucleus {ECO:0000256|SAAS:SAAS00442313}; KW Reference proteome {ECO:0000313|Proteomes:UP000007720}. FT DOMAIN 309 453 HELICc2. {ECO:0000259|SMART:SM00491}. FT NON_TER 1 1 {ECO:0000313|EMBL:CAH98515.1}. SQ SEQUENCE 528 AA; 60970 MW; BA3A56AE4B73DB28 CRC64; AYFDEEMNLV FKELLEEEMN YNESNKNGKT NDDVEKLSDK IIIDDLKKIL NINNNEKNDL KNKDKSNLEE INYSPLLMED IIKNVVMPGN IRKSEHFLNL MRIIVVYLKK YINIYEVTSE GPLSFLYKCE KDTKLDTSFF KYSFDRLKSL LNTLQVVDTD DYSALNIVCN FCTLIGNYFK GFIIICEPYP EATGIYDPVI QFACLDSSIA MKSVLNRYKS IVLTSGTITP LELYPKLLNF STVLTASFPM SFDRTCVCPL IVTKSSDLIP LSSQYSLRND LNVIKNYGFL LVEMCKNIPD GIISYFPSYI YMEHVMSTWY ELGIISNILE YKLIFIETKD IVSTTIALHN FKKACDLGKG AVFLSICRGK IAEGIDFDKH YGKCVILFGI PYQYTLSRIL KARLDFLKET YNIQENEFLT FDAMRQASQC VGRIIRNKKD YGIMIFSDIR YTRNDKKSKL PPWIIKCMDI SNTNLTIGAS VNISKKFLLN MSQEYKETDQ TKISQVILQN PIKCWEIVKS ILNMDDFI // ID Q57YJ9_TRYB2 Unreviewed; 819 AA. AC Q57YJ9; D6XLY2; DT 10-MAY-2005, integrated into UniProtKB/TrEMBL. DT 10-MAY-2005, sequence version 1. DT 11-MAY-2016, entry version 68. DE SubName: Full=TFIIH basal transcription factor complex helicase subunit, putative {ECO:0000313|EMBL:AAX69298.1}; DE EC=3.6.1.- {ECO:0000313|EMBL:AAX69298.1}; GN ORFNames=Tb927.8.5980 {ECO:0000313|EMBL:AAX69298.1}; OS Trypanosoma brucei brucei (strain 927/4 GUTat10.1). OC Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Trypanosoma. OX NCBI_TaxID=185431 {ECO:0000313|Proteomes:UP000008524}; RN [1] {ECO:0000313|EMBL:AAZ13362.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=927/4 GUTat10.1 {ECO:0000313|EMBL:AAZ13362.1}; RX PubMed=16020724; DOI=10.1126/science.1112181; RA El-Sayed N.M., Myler P.J., Blandin G., Berriman M., Crabtree J., RA Aggarwal G., Caler E., Renauld H., Worthey E.A., Hertz-Fowler C., RA Ghedin E., Peacock C., Bartholomeu D.C., Haas B.J., Tran A.N., RA Wortman J.R., Alsmark U.C., Angiuoli S., Anupama A., Badger J., RA Bringaud F., Cadag E., Carlton J.M., Cerqueira G.C., Creasy T., RA Delcher A.L., Djikeng A., Embley T.M., Hauser C., Ivens A.C., RA Kummerfeld S.K., Pereira-Leal J.B., Nilsson D., Peterson J., RA Salzberg S.L., Shallom J., Silva J.C., Sundaram J., Westenberger S., RA White O., Melville S.E., Donelson J.E., Andersson B., Stuart K.D., RA Hall N.; RT "Comparative genomics of trypanosomatid parasitic protozoa."; RL Science 309:404-409(2005). RN [2] {ECO:0000313|EMBL:AAZ13362.1, ECO:0000313|Proteomes:UP000008524} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=927/4 GUTat10.1 {ECO:0000313|EMBL:AAZ13362.1, RC ECO:0000313|Proteomes:UP000008524}; RX PubMed=16020726; DOI=10.1126/science.1112642; RA Berriman M., Ghedin E., Hertz-Fowler C., Blandin G., Renauld H., RA Bartholomeu D.C., Lennard N.J., Caler E., Hamlin N.E., Haas B., RA Bohme U., Hannick L., Aslett M.A., Shallom J., Marcello L., Hou L., RA Wickstead B., Alsmark U.C.M., Arrowsmith C., Atkin R.J., Barron A.J., RA Bringaud F., Brooks K., Carrington M., Cherevach I., RA Chillingworth T.J., Churcher C., Clark L.N., Corton C.H., Cronin A., RA Davies R.M., Doggett J., Djikeng A., Feldblyum T., Field M.C., RA Fraser A., Goodhead I., Hance Z., Harper D., Harris B.R., Hauser H., RA Hostetler J., Ivens A., Jagels K., Johnson D., Johnson J., Jones K., RA Kerhornou A.X., Koo H., Larke N., Landfear S., Larkin C., Leech V., RA Line A., Lord A., Macleod A., Mooney P.J., Moule S., Martin D.M., RA Morgan G.W., Mungall K., Norbertczak H., Ormond D., Pai G., RA Peacock C.S., Peterson J., Quail M.A., Rabbinowitsch E., RA Rajandream M.A., Reitter C., Salzberg S.L., Sanders M., Schobel S., RA Sharp S., Simmonds M., Simpson A.J., Tallon L., Turner C.M., Tait A., RA Tivey A.R., Van Aken S., Walker D., Wanless D., Wang S., White B., RA White O., Whitehead S., Woodward J., Wortman J., Adams M.D., RA Embley T.M., Gull K., Ullu E., Barry J.D., Fairlamb A.H., RA Opperdoes F., Barrell B.G., Donelson J.E., Hall N., Fraser C.M., RA Melville S.E., El-Sayed N.M.A.; RT "The genome of the African trypanosome Trypanosoma brucei."; RL Science 309:416-422(2005). RN [3] {ECO:0000313|EMBL:AAX69298.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=GUTat10.1 {ECO:0000313|EMBL:AAX69298.1}; RA Ghedin E., Blandin G., Bartholomeu D., Caler E., Haas B., Hannick L., RA Shallom J., Hou L., Djikeng A., Feldblyum T., Hostetler J., RA Johnson J., Jones K., Koo H.L., Larkin C., Pai G., Peterson J., RA Khalak H.G., Salzberg S., Simpson A.J., Tallon L., Van Aken S., RA Wanless D., White O., Wortman J., Fraser C.M., El-Sayed N.M.A.; RL Submitted (APR-2005) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AC159405; AAX69298.1; -; Genomic_DNA. DR EMBL; CP000071; AAZ13362.1; -; Genomic_DNA. DR RefSeq; XP_847428.1; XM_842335.1. DR EnsemblProtists; AAZ13362; AAZ13362; Tb927.8.5980. DR GeneDB; Tb927.8.5980:pep; -. DR GeneID; 3659594; -. DR KEGG; tbr:Tb927.8.5980; -. DR EuPathDB; TriTrypDB:Tb927.8.5980; -. DR HOGENOM; HOG000205390; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR Proteomes; UP000008524; Chromosome 8. DR GO; GO:0005675; C:holo TFIIH complex; ISA:GeneDB. DR GO; GO:0043139; F:5'-3' DNA helicase activity; ISA:GeneDB. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0003700; F:transcription factor activity, sequence-specific DNA binding; IDA:GeneDB. DR GO; GO:0032508; P:DNA duplex unwinding; ISA:GOC. DR GO; GO:0006281; P:DNA repair; ISM:GeneDB. DR GO; GO:0042789; P:mRNA transcription from RNA polymerase II promoter; ISA:GeneDB. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR GO; GO:0006355; P:regulation of transcription, DNA-templated; IDA:GOC. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 2. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:AAX69298.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000008524}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:AAX69298.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:AAX69298.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:AAX69298.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000008524}. FT DOMAIN 23 291 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 262 304 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 819 AA; 92407 MW; 3957D770481E76C9 CRC64; MIVVVAVTKH CTSPAGMKLF IEDVPVLFPY EYIYPEQLEY MTELKKGLDQ GGHMVLEMPS GTGKTTTLLS LLIAYLHHHA DEKRKVVYCT RTVGEVDKTA SELRKILGLW ETEEVGSRPL RGVCLTAKKN LCIEPSVVSR RHLDDVDAGC RSLTAPWQTD QRCVYFDTLE NQGFDLRPGA YSLSDLKRLG EENHVCPYYL ARKALKVADI VIHSFLYIVD PIVAEVTKEY MDENTIVVMD EAHNVDDVCI EAMSLIVTKD DAFQAKDNVK KLNEAVDRMK ATNRQKLQEE YDRLVNGLAM AELARSGEST AGVSVQALNI PQDIAEEAIP GSLRQANHFL AFMQRLVDFT HRVVCRISRT YVADPLTFLT KVKEECSVDV RHLRYLTERL KVLLNTLQIT SAHSFHNVSL IAQMFMTLST HYTDDRYEKP GFVVVCEASD PTRPTIPDPV IRLVCVDASL ALREVFAKYR SVILTSGTLS PLDIYPKMLG FSPVIAKSFQ MTLSRKCIAP VVVTRSSESV NITAEEVTSS FVVRKNPEAQ ATVSAAYEDL LRGLAKTVPD GIVCFFTGYQ YMSEVLLGWH RSGFLKELSR HKLIFVETQS VDDTATALES YRRACDIGRG AIFMSIARGK IAEGIDFDSH YGRAVVMFGV PFLPPIDEPL RQRIHWMEIC LGIPGSEYRN FDAMRQASQC IGRVLRNKTD YGMMLLVDRR FALNDKRKKL PIWIQQCLKE NTNLSVDAAV AVARGFFKEM AQPWEYKRDL GTTLFSVETL ARKGFLKPSK SSVSRKTVDE SRATTTVPPP AEEIIRPVRE PDYRKRSRE // ID Q5AFE9_CANAL Unreviewed; 765 AA. AC Q5AFE9; Q3MPX4; DT 26-APR-2005, integrated into UniProtKB/TrEMBL. DT 26-APR-2005, sequence version 1. DT 11-MAY-2016, entry version 75. DE SubName: Full=DNA repair helicase RAD3 {ECO:0000313|EMBL:KHC71700.1}; DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EAL01566.1}; GN Name=RAD3 {ECO:0000313|CGD:CAL0000192893, GN ECO:0000313|EMBL:EAL01566.1}; GN OrderedLocusNames=orf19.7119 {ECO:0000313|CGD:CAL0000192893}; GN ORFNames=CaO19.7119 {ECO:0000313|EMBL:EAL01566.1}, GN I503_05016 {ECO:0000313|EMBL:KHC80822.1}, GN W5Q_05059 {ECO:0000313|EMBL:KHC71700.1}; OS Candida albicans (strain SC5314 / ATCC MYA-2876) (Yeast). OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; OC Saccharomycetes; Saccharomycetales; Debaryomycetaceae; OC Candida/Lodderomyces clade; Candida. OX NCBI_TaxID=237561 {ECO:0000313|EMBL:EAL01566.1, ECO:0000313|Proteomes:UP000000559}; RN [1] {ECO:0000313|EMBL:EAL01566.1, ECO:0000313|Proteomes:UP000000559} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=SC5314 {ECO:0000313|EMBL:EAL01566.1}, and RC SC5314 / ATCC MYA-2876 {ECO:0000313|Proteomes:UP000000559}; RX PubMed=15123810; DOI=10.1073/pnas.0401648101; RA Jones T., Federspiel N.A., Chibana H., Dungan J., Kalman S., RA Magee B.B., Newport G., Thorstenson Y.R., Agabian N., Magee P.T., RA Davis R.W., Scherer S.; RT "The diploid genome sequence of Candida albicans."; RL Proc. Natl. Acad. Sci. U.S.A. 101:7329-7334(2004). RN [2] {ECO:0000313|EMBL:KHC71700.1, ECO:0000313|Proteomes:UP000030447, ECO:0000313|Proteomes:UP000030576} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=SC5314 {ECO:0000313|Proteomes:UP000030447, RC ECO:0000313|Proteomes:UP000030576}; RG The Broad Institute Genome Sequencing Platform; RG The Broad Institute Genome Sequencing Center for Infectious Disease; RA Cuomo C., Bennett R., Hirakawa M., Noverr M., Mitchell A., Young S.K., RA Zeng Q., Gargeya S., Fitzgerald M., Abouelleil A., Alvarado L., RA Berlin A.M., Chapman S.B., Dewar J., Goldberg J., Griggs A., Gujja S., RA Hansen M., Howarth C., Imamovic A., Larimer J., McCowan C., Murphy C., RA Pearson M., Priest M., Roberts A., Saif S., Shea T., Sykes S., RA Wortman J., Nusbaum C., Birren B.; RT "The Genome Sequence of Candida albicans SC5314."; RL Submitted (JUN-2013) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:EAL01566.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AACQ01000024; EAL01566.1; -; Genomic_DNA. DR EMBL; AJJF01000032; KHC71700.1; -; Genomic_DNA. DR EMBL; JTBX01000063; KHC80822.1; -; Genomic_DNA. DR RefSeq; XP_720409.1; XM_715316.1. DR RefSeq; XP_888639.1; XM_883546.1. DR EnsemblFungi; EAL01566; EAL01566; CaO19.7119. DR EnsemblFungi; KHC71700; KHC71700; W5Q_05059. DR EnsemblFungi; KHC80822; KHC80822; I503_05016. DR GeneID; 3638014; -. DR GeneID; 3704106; -. DR KEGG; cal:CaO19.7119; -. DR KEGG; cal:CaO19_7119; -. DR CGD; CAL0002854; orf19.7119. DR CGD; CAL0000192893; RAD3. DR KO; K10844; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000000559; Unassembled WGS sequence. DR Proteomes; UP000030447; Unassembled WGS sequence. DR Proteomes; UP000030576; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0003678; F:DNA helicase activity; IDA:CGD. DR GO; GO:0032508; P:DNA duplex unwinding; IDA:GOC. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:KHC71700.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000000559}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:KHC71700.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:KHC71700.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:KHC71700.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000000559}. FT DOMAIN 7 286 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 257 299 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 765 AA; 87783 MW; 6207839FC6C6ED43 CRC64; MKFFIDDLPV LFPYPRIYPE QYSYMCDIKK TLDVGGNCIL EMPSGTGKTV SLLSLTVAYQ MHYPEHRKIV YCSRTMSEIE KALIELHKLM EFRANELGEV EDFRGLGLTS RKNLCLHPTI SKERKGVVVD EKCRRITNGQ LKEKIEKGVP TEDSLCSFHE KLYDLEPHNL VPPGVYSFDA LIKYCKEEGT CPYFTVRRMI PFCNIIIYSY HYLLDPKIAE RVSRELSKDS IVIFDEAHNI DNVCIESLSL DLTDETLKKA SRGANKLGEA IEDMKAQDSE KLQNEYEQLV EGLRQAEIAR DQELFMANPV LPQDLLDEAI PGNIRKGEHF IAFLKRFIEY LKTRMKVLHV ISETPTSFLQ HLKELTYIER KPLRFCSERL SLLVRTLEVT EIDDFNALKD IATFATLVST YDSGFQLILE PYETEGSTVP NPILHFTCLD ASIAIKPVFD RFSSVIITSG TISPLDMYPK MLKFETVIQE SYAMTLARRS FLPMIVTKGS DQVSISSRFE IRNDPSVVRN YGSLLIEFAK ITPDGMVVFF PSYLYMESII SMWQSMGVLD EVWKHKLILV ETPDAQETSL ALETYRKACS NGRGAVLLSV ARGKVSEGID FDHHYGRTVL MIGIPFQYTE SRILKARLEF MRDHFQIKEN DFLSFDAMRH AAQCLGRVLR GKDDYGIMVL ADRRFARKKN QLPKWIAQAL NDSDTNLSTD MALATAKKFL RSLAQPTNPK DSEGVSIWNI EQLQEYQQQF QKDEMDIDEE DLDLL // ID Q5CYV9_CRYPI Unreviewed; 841 AA. AC Q5CYV9; DT 12-APR-2005, integrated into UniProtKB/TrEMBL. DT 12-APR-2005, sequence version 1. DT 11-MAY-2016, entry version 65. DE SubName: Full=RAD3'DEXDc+HELICc protein {ECO:0000313|EMBL:EAK90409.1}; GN ORFNames=cgd7_820 {ECO:0000313|EMBL:EAK90409.1}; OS Cryptosporidium parvum (strain Iowa II). OC Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; OC Eucoccidiorida; Eimeriorina; Cryptosporidiidae; Cryptosporidium. OX NCBI_TaxID=353152 {ECO:0000313|EMBL:EAK90409.1, ECO:0000313|Proteomes:UP000006726}; RN [1] {ECO:0000313|EMBL:EAK90409.1, ECO:0000313|Proteomes:UP000006726} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Iowa II {ECO:0000313|Proteomes:UP000006726}; RX PubMed=15044751; DOI=10.1126/science.1094786; RA Abrahamsen M.S., Templeton T.J., Enomoto S., Abrahante J.E., Zhu G., RA Lancto C.A., Deng M., Liu C., Widmer G., Tzipori S., Buck G.A., Xu P., RA Bankier A.T., Dear P.H., Konfortov B.A., Spriggs H.F., Iyer L., RA Anantharaman V., Aravind L., Kapur V.; RT "Complete genome sequence of the apicomplexan, Cryptosporidium RT parvum."; RL Science 304:441-445(2004). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:EAK90409.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AAEE01000001; EAK90409.1; -; Genomic_DNA. DR RefSeq; XP_628271.1; XM_628269.1. DR ProteinModelPortal; Q5CYV9; -. DR STRING; 353152.XP_628271.1; -. DR EnsemblProtists; EAK90409; EAK90409; cgd7_820. DR GeneID; 3372163; -. DR KEGG; cpv:cgd7_820; -. DR EuPathDB; CryptoDB:cgd7_820; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR HOGENOM; HOG000205390; -. DR InParanoid; Q5CYV9; -. DR KO; K10844; -. DR Proteomes; UP000006726; Chromosome 7. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 2. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 2. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000006726}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000006726}. FT DOMAIN 8 380 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 77 115 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 841 AA; 95274 MW; 5D08807D204E3078 CRC64; MVRFFIEELE VFFPYDNVYP EQLEYMKYLK QILDAHSHGV LEMPTGTGKT VTLLSFITSY QLVHPNMGKL IYCTRTVAEM EKALQELKTV VDYCKKEIEN DKIKLEQEIK SENNSSLASV SESRFSAASI LGIGMTARRN MCINPRVSVH ADRDKIDSMC RSMTAPWVRA KHQMEARERS ALSEGDANSS KMTEIADIEE MLESGCTTLC PYYEAYERVW SSDLVPTGIY TIDEFKDFSK NWEHPILGKK IQFCPYFASK RLIQTAKVVV LNYQYILDPK VAQASLLGGG TVSQGFSHGA NPNGLSLGSK FAASLLPEQE GTKEPSVVVF DEAHNIDNVC IEALSVNMNR QILSGAARNL RTLKSEIESL SSLDEQRLQD EYTRLIQGLR NSGQVQDEAV LEDLERFPVL PEEMEKIKKG LIPGSIRRAE HFITIMKKLI LYLQEYIRVY STRIEGPLTF VKHIEASCYI QSGLLKFCDE RLRSLLNTLR IVDSDQYSSL ELVCTFFTIL GSYSKGFIVI VDPYPEVSGL YDPVIQLSCL DSSIAMRPIL KRYQSIVLTS GTLSPLDLYP KLLGFIPVVS QSLTMTLDRT CICPLIVTRG SDQTPLSSKF ESRADVSIQQ NYGKLILEIT KKVPDGVVCF FSSYLYMEQM LSQWYESGLL AQIMEHKLVF VETKDIVSTT LALHHYRKAC DIGRGAIFFS IARGKVAEGI DFDRHYGRCV VMVGIPYQYT LSKILQSRLS FLKENYGIQE NEFLTFDAMR QASQCVGRVI RSKADYGLMI FADLRYNKKD KREKIPPWIL KHLKPEYSTL STDMAVSISS NFLKQMSQPY AVSNSIIKLG S // ID Q5JH96_THEKO Unreviewed; 637 AA. AC Q5JH96; DT 15-FEB-2005, integrated into UniProtKB/TrEMBL. DT 15-FEB-2005, sequence version 1. DT 11-MAY-2016, entry version 76. DE SubName: Full=ERCC2/XPD/Rad3-related DNA repair helicase {ECO:0000313|EMBL:BAD84973.1}; GN OrderedLocusNames=TK0784 {ECO:0000313|EMBL:BAD84973.1}; OS Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) OS (Pyrococcus kodakaraensis (strain KOD1)). OC Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; OC Thermococcus. OX NCBI_TaxID=69014 {ECO:0000313|Proteomes:UP000000536}; RN [1] {ECO:0000313|EMBL:BAD84973.1, ECO:0000313|Proteomes:UP000000536} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC BAA-918 / JCM 12380 / KOD1 RC {ECO:0000313|Proteomes:UP000000536}; RX PubMed=15710748; DOI=10.1101/gr.3003105; RA Fukui T., Atomi H., Kanai T., Matsumi R., Fujiwara S., Imanaka T.; RT "Complete genome sequence of the hyperthermophilic archaeon RT Thermococcus kodakaraensis KOD1 and comparison with Pyrococcus RT genomes."; RL Genome Res. 15:352-363(2005). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AP006878; BAD84973.1; -; Genomic_DNA. DR RefSeq; WP_011249735.1; NC_006624.1. DR ProteinModelPortal; Q5JH96; -. DR STRING; 69014.TK0784; -. DR EnsemblBacteria; BAD84973; BAD84973; TK0784. DR GeneID; 3233777; -. DR KEGG; tko:TK0784; -. DR eggNOG; arCOG00770; Archaea. DR eggNOG; COG1199; LUCA. DR HOGENOM; HOG000223366; -. DR InParanoid; Q5JH96; -. DR KO; K10844; -. DR OMA; PDWMVET; -. DR BioCyc; TKOD69014:GH72-796-MONOMER; -. DR Proteomes; UP000000536; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR014001; Helicase_ATP-bd. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00487; DEXDc; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000313|EMBL:BAD84973.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000000536}; KW Helicase {ECO:0000313|EMBL:BAD84973.1}; KW Hydrolase {ECO:0000313|EMBL:BAD84973.1}; KW Nucleotide-binding {ECO:0000313|EMBL:BAD84973.1}; KW Reference proteome {ECO:0000313|Proteomes:UP000000536}. FT DOMAIN 1 261 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 637 AA; 72587 MW; DD56EC46EEC480C5 CRC64; MSEYFPYENL RPNQREFIEL IGEAVKNGEN AIVEAPTGFG KTISVLAGVL PFAKEYGYKV LYLARTHRQM DRVIEELKAI HRKKPVSGVE LRSRKELCLH TYLKQFTTDA YNAMVVCKNL KKLGKCPFYE NEKKKKAEFE EVIRFFLTEP SHPAEILNYA ETLELCPYDL TKRIAEKADV IVASYLYALS PSIRESLISS LGVDYSDLIV IFDEAHNLPD QAISALSDRL SIHTINRAIK EADEYREHEI ANFLSILGKG LEKLYSEKLA ERDVEEAPVQ PELVFTHVIE ILGINERWLV KTLNEMVSVG DAIREDRIEK GKPPRSYVGR VGEFLLLWLS LIGRDDYLFL MTREKGMSLE LVALDPSRAL SFIKDVQSAI FMSGTLTPLE AFRDVMGIEN ARMKKFPRMV KRENAQVLVA KDVSTRGDER SLQAYRKMVD YIVEAVKLIP KNVGVFTASY EVLQGLLSAN LDVKLEETGR AVFIEQQGVS SRENDLMIAQ FKAHAKGNGA VLLGVMGGRN SEGQDYSGDE MNGVVLVGIP YARPTPRVQA QIRYFEKKFP GKGRYYGYYL PAHRKLVQAA GRVHRSAEEK GSIVILDYRV LWRSIRKDLP DWMKETMKPV TLPTMRLYLK RFWSNGR // ID Q5KNR6_CRYNJ Unreviewed; 799 AA. AC Q5KNR6; Q55ZF1; DT 15-FEB-2005, integrated into UniProtKB/TrEMBL. DT 15-FEB-2005, sequence version 1. DT 11-MAY-2016, entry version 89. DE SubName: Full=General RNA polymerase II transcription factor, putative {ECO:0000313|EMBL:AAW41061.1}; GN OrderedLocusNames=CNA05570 {ECO:0000313|EMBL:AAW41061.1}; OS Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / OS ATCC MYA-565) (Filobasidiella neoformans). OC Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; OC Tremellomycetes; Tremellales; Tremellaceae; Filobasidiella; OC Filobasidiella/Cryptococcus neoformans species complex. OX NCBI_TaxID=214684 {ECO:0000313|EMBL:AAW41061.1, ECO:0000313|Proteomes:UP000002149}; RN [1] {ECO:0000313|EMBL:AAW41061.1, ECO:0000313|Proteomes:UP000002149} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=JEC21 / ATCC MYA-565 {ECO:0000313|Proteomes:UP000002149}; RX PubMed=15653466; DOI=10.1126/science.1103773; RA Loftus B.J., Fung E., Roncaglia P., Rowley D., Amedeo P., Bruno D., RA Vamathevan J., Miranda M., Anderson I.J., Fraser J.A., Allen J.E., RA Bosdet I.E., Brent M.R., Chiu R., Doering T.L., Donlin M.J., RA D'Souza C.A., Fox D.S., Grinberg V., Fu J., Fukushima M., Haas B.J., RA Huang J.C., Janbon G., Jones S.J.M., Koo H.L., Krzywinski M.I., RA Kwon-Chung K.J., Lengeler K.B., Maiti R., Marra M.A., Marra R.E., RA Mathewson C.A., Mitchell T.G., Pertea M., Riggs F.R., Salzberg S.L., RA Schein J.E., Shvartsbeyn A., Shin H., Shumway M., Specht C.A., RA Suh B.B., Tenney A., Utterback T.R., Wickes B.L., Wortman J.R., RA Wye N.H., Kronstad J.W., Lodge J.K., Heitman J., Davis R.W., RA Fraser C.M., Hyman R.W.; RT "The genome of the basidiomycetous yeast and human pathogen RT Cryptococcus neoformans."; RL Science 307:1321-1324(2005). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AE017341; AAW41061.1; -; Genomic_DNA. DR RefSeq; XP_566880.1; XM_566880.1. DR UniGene; Fne.7460; -. DR ProteinModelPortal; Q5KNR6; -. DR STRING; 214684.XP_566880.1; -. DR PaxDb; Q5KNR6; -. DR EnsemblFungi; AAW41061; AAW41061; CNA05570. DR GeneID; 3253270; -. DR KEGG; cne:CNA05570; -. DR EuPathDB; FungiDB:CNA05570; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR HOGENOM; HOG000205390; -. DR InParanoid; Q5KNR6; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000002149; Chromosome 1. DR GO; GO:0005829; C:cytosol; IEA:EnsemblFungi. DR GO; GO:0000112; C:nucleotide-excision repair factor 3 complex; IEA:EnsemblFungi. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0000717; P:nucleotide-excision repair, DNA duplex unwinding; IEA:EnsemblFungi. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000002149}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000002149}. FT DOMAIN 7 285 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 256 302 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 799 AA; 90853 MW; 52F11A04013BE54C CRC64; MKFMLGDLPV LFPYDRLYPE QYSYMADLKT TLDAGGHCVL EMPSGTGKTV SLLSLIIAYM QFYPNKRKLI YCSRTVPEIE KALAELKRLM MYRAEMGAND GDFRGLGLTS RRNLCLHPEV SKEKKGKIVD SRCRDLTSAF ACEKGRADPG SVPLCSFHEE LNNYEPGNLI PPGVYTLDDV KKYGQEKGVC PYFTIRRMLP FLDVMIYSFH YLLDPKVAEQ VSAEMSKESI VIFDEAHNID NVCIESLSID LTRPMLDSAA RSVNKLSDKI AEIKETDAKK LEDEYAKLVE GLQEANERVE DDDMLVSPVL SKDMVDEAIP GNIRKAEHFI AFLKRFIEYL KTRMRVLHVV AETPQSFLAH LKEITYIDQR PLKFASERLT CLVRTLELTN LEEHSALQKV AGFGTLVATY EKGFLLILEP YETEHATVPN PIFHFTCLDP SLAIAPVFDR FASVVITSGT ISPLDMYPKM LQFQPVMEQS YPMTLTRNAF LPMVITRGSD QVPISSRFEV RNDPAVVRNF GSILIEMART VPDGVVAFFP SYLYMESIVS AWYDMGILSE VWKHKLLFVE TPDAMETSIA LRNYREACNN GRGAVLLSVA RGKVSEGIDF DHNYGRAVIM FGIPYQYTES RILKARLEFL RDNHRIREND YLTFDAMRHA AQCVGRVLRG KTDWGLMVFA DKRFARQDKR AKLPKWINSY ITEAHSNLST DVAVSLAKKF IRQISQPFDH TQTGISLWTL EDIEERQRRD KDEAERVEMT QSAAIRESAA EENDHAPLAS DYMEIDDAEL AGLSIPIDE // ID Q6AUI3_ORYSJ Unreviewed; 758 AA. AC Q6AUI3; DT 13-SEP-2004, integrated into UniProtKB/TrEMBL. DT 13-SEP-2004, sequence version 1. DT 11-MAY-2016, entry version 94. DE SubName: Full=Os05g0144800 protein {ECO:0000313|EMBL:BAF16541.1}; DE SubName: Full=Putative nucleotide excision repair protein XP-D {ECO:0000313|EMBL:AAT93995.1}; DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EEE62304.1}; GN OrderedLocusNames=Os05g0144800 {ECO:0000313|EMBL:BAF16541.1}; GN ORFNames=OsJ_17093 {ECO:0000313|EMBL:EEE62304.1}, GN OSJNBb0015A05.1 {ECO:0000313|EMBL:AAT93995.1}, GN OSNPB_050144800 {ECO:0000313|EMBL:BAS92234.1}; OS Oryza sativa subsp. japonica (Rice). OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza. OX NCBI_TaxID=39947 {ECO:0000313|EMBL:AAT93995.1}; RN [1] {ECO:0000313|EMBL:AAT93995.1} RP NUCLEOTIDE SEQUENCE. RA Chow T.-Y., Hsing Y.-I.C., Chen C.-S., Chen H.-H., Liu S.-M., RA Chao Y.-T., Chang S.-J., Chen H.-C., Chen S.-K., Chen T.-R., RA Chen Y.-L., Cheng C.-H., Chung C.-I., Han S.-Y., Hsiao S.-H., RA Hsiung J.-N., Hsu C.-H., Huang J.-J., Kau P.-I., Lee M.-C., Leu H.-L., RA Li Y.-F., Lin S.-J., Lin Y.-C., Wu S.-W., Yu C.-Y., Yu S.-W., RA Wu H.-P., Shaw J.-F.; RT "Oryza sativa BAC OSJNBb0015A05 genomic sequence."; RL Submitted (AUG-2004) to the EMBL/GenBank/DDBJ databases. RN [2] {ECO:0000313|EMBL:BAF16541.1, ECO:0000313|Proteomes:UP000059680} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=cv. Nipponbare {ECO:0000313|Proteomes:UP000059680}; RX PubMed=16100779; DOI=10.1038/nature03895; RG International rice genome sequencing project (IRGSP); RT "The map-based sequence of the rice genome."; RL Nature 436:793-800(2005). RN [3] {ECO:0000313|EMBL:EEE62304.1} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038; RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., RA Cong L., Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., RA Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., RA Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., RA Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., RA Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., RA Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., RA Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., RA Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., RA Chen C., Chen H., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., RA Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., RA Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., RA Zheng W., Hao B., Liu S., Wang W., Yuan L., Cao M., McDermott J., RA Samudrala R., Wang J., Wong G.K., Yang H.; RT "The genomes of Oryza sativa: a history of duplications."; RL PLoS Biol. 3:266-281(2005). RN [4] {ECO:0000313|EMBL:BAF16541.1} RP NUCLEOTIDE SEQUENCE. RG IRGSP(International Rice Genome Sequencing Project); RT "Oryza sativa nipponbare(GA3) genomic DNA, chromosome 5."; RL Submitted (FEB-2005) to the EMBL/GenBank/DDBJ databases. RN [5] {ECO:0000313|EMBL:BAF16541.1} RP NUCLEOTIDE SEQUENCE. RG The Rice Annotation Project (RAP); RT "The Second Rice Annotation Project Meeting (RAP2)."; RL Submitted (FEB-2005) to the EMBL/GenBank/DDBJ databases. RN [6] {ECO:0000313|EMBL:BAF16541.1} RP NUCLEOTIDE SEQUENCE. RX PubMed=16381971; DOI=10.1093/nar/gkj094; RA Ohyanagi H., Tanaka T., Sakai H., Shigemoto Y., Yamaguchi K., RA Habara T., Fujii Y., Antonio B.A., Nagamura Y., Imanishi T., Ikeo K., RA Itoh T., Gojobori T., Sasaki T.; RT "The Rice Annotation Project Database (RAP-DB): hub for Oryza sativa RT ssp. japonica genome information."; RL Nucleic Acids Res. 34:D741-D744(2006). RN [7] {ECO:0000313|EMBL:EEE62304.1} RP NUCLEOTIDE SEQUENCE. RA Wang J., Li R., Fan W., Huang Q., Zhang J., Zhou Y., Hu Y., Zi S., RA Li J., Ni P., Zheng H., Zhang Y., Zhao M., Hao Q., McDermott J., RA Samudrala R., Kristiansen K., Wong G.K.-S.; RT "Improved gene annotation of the rice (Oryza sativa) genomes."; RL Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases. RN [8] {ECO:0000313|EMBL:BAF16541.1} RP NUCLEOTIDE SEQUENCE. RG The Rice Annotation Project (RAP); RA Itoh T., Tanaka T., Barrero R.A., Yamasaki C., Fujii Y., Hilton P.B., RA Antonio B.A., Aono H., Apweiler R., Bruskiewich R., Bureau T., RA Burr F., Costa de Oliveira A., Fuks G., Habara T., Haberer G., Han B., RA Harada E., Hiraki A.T., Hirochika H., Hoen D., Hokari H., Hosokawa S., RA Hsing Y., Ikawa H., Ikeo K., Imanishi T., Ito Y., Jaiswal P., RA Kanno M., Kawahara Y., Kawamura T., Kawashima H., Khurana J.P., RA Kikuchi S., Komatsu S., Koyanagi K.O., Kubooka H., Lieberherr D., RA Lin Y.C., Lonsdale D., Matsumoto T., Matsuya A., McCombie W.R., RA Messing J., Miyao A., Mulder N., Nagamura Y., Nam J., Namiki N., RA Numa H., Nurimoto S., O'donovan C., Ohyanagi H., Okido T., Oota S., RA Osato N., Palmer L.E., Quetier F., Raghuvanshi S., Saichi N., RA Sakai H., Sakai Y., Sakata K., Sakurai T., Sato F., Sato Y., RA Schoof H., Seki M., Shibata M., Shimizu Y., Shinozaki K., Shinso Y., RA Singh N.K., Smith-White B., Takeda J., Tanino M., Tatusova T., RA Thongjuea S., Todokoro F., Tsugane M., Tyagi A.K., Vanavichit A., RA Wang A., Wing R.A., Yamaguchi K., Yamamoto M., Yamamoto N., Yu Y., RA Zhang H., Zhao Q., Higo K., Burr B., Gojobori T., Sasaki T.; RT "Curated Genome Annotation of Oryza sativa ssp. japonica and RT Comparative Genome Analysis with Arabidopsis thaliana."; RL Genome Res. 17:175-183(2007). RN [9] {ECO:0000313|EMBL:BAF16541.1} RP NUCLEOTIDE SEQUENCE. RG The Rice Annotation Project (RAP); RA Tanaka T., Antonio B.A., Kikuchi S., Matsumoto T., Nagamura Y., RA Numa H., Sakai H., Wu J., Itoh T., Sasaki T., Aono R., Fujii Y., RA Habara T., Harada E., Kanno M., Kawahara Y., Kawashima H., Kubooka H., RA Matsuya A., Nakaoka H., Saichi N., Sanbonmatsu R., Sato Y., Shinso Y., RA Suzuki M., Takeda J., Tanino M., Todokoro F., Yamaguchi K., RA Yamamoto N., Yamasaki C., Imanishi T., Okido T., Tada M., Ikeo K., RA Tateno Y., Gojobori T., Lin Y.C., Wei F.J., Hsing Y.I., Zhao Q., RA Han B., Kramer M.R., McCombie R.W., Lonsdale D., O'Donovan C.C., RA Whitfield E.J., Apweiler R., Koyanagi K.O., Khurana J.P., RA Raghuvanshi S., Singh N.K., Tyagi A.K., Haberer G., Fujisawa M., RA Hosokawa S., Ito Y., Ikawa H., Shibata M., Yamamoto M., RA Bruskiewich R.M., Hoen D.R., Bureau TE., Namiki N., Ohyanagi H., RA Sakai Y., Nobushima S., Sakata K., Barrero R.A., Sato Y., Souvorov A., RA Smith-White B., Tatusova T., An S., An G., OOta S., Fuks G., RA Messing J., Christie K.R., Lieberherr D., Kim H., Zuccolo A., RA Wing R.A., Nobuta K., Green P.J., Lu C., Meyers BC., Chaparro C., RA Piegu B., Panaud O., Echeverria M.; RT "The Rice Annotation Project Database (RAP-DB): 2008 update."; RL Nucleic Acids Res. 36:D1028-D1033(2008). RN [10] {ECO:0000313|EMBL:BAS92234.1} RP NUCLEOTIDE SEQUENCE. RX PubMed=23299411; DOI=10.1093/pcp/pcs183; RA Sakai H., Lee S.S., Tanaka T., Numa H., Kim J., Kawahara Y., RA Wakimoto H., Yang C.C., Iwamoto M., Abe T., Yamada Y., Muto A., RA Inokuchi H., Ikemura T., Matsumoto T., Sasaki T., Itoh T.; RT "Rice Annotation Project Database (RAP-DB): an integrative and RT interactive database for rice genomics."; RL Plant Cell Physiol. 54:E6-E6(2013). RN [11] {ECO:0000313|EMBL:BAS92234.1, ECO:0000313|Proteomes:UP000059680} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=cv. Nipponbare {ECO:0000313|Proteomes:UP000059680}; RX PubMed=24280374; DOI=10.1186/1939-8433-6-4; RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., RA McCombie W.R., Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., RA Childs K.L., Davidson R.M., Lin H., Quesada-Ocampo L., RA Vaillancourt B., Sakai H., Lee S.S., Kim J., Numa H., Itoh T., RA Buell C.R., Matsumoto T.; RT "Improvement of the Oryza sativa Nipponbare reference genome using RT next generation sequence and optical map data."; RL Rice 6:4-4(2013). RN [12] {ECO:0000313|EMBL:BAS92234.1} RP NUCLEOTIDE SEQUENCE. RA Millard Andrew; RL Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AC124142; AAT93995.1; -; Genomic_DNA. DR EMBL; AP008211; BAF16541.1; -; Genomic_DNA. DR EMBL; AP014961; BAS92234.1; -; Genomic_DNA. DR EMBL; CM000142; EEE62304.1; -; Genomic_DNA. DR RefSeq; XP_015637543.1; XM_015782057.1. DR UniGene; Os.53756; -. DR STRING; 39947.LOC_Os05g05260.1; -. DR EnsemblPlants; OS05T0144800-01; OS05T0144800-01; OS05G0144800. DR GeneID; 4337788; -. DR Gramene; OS05T0144800-01; OS05T0144800-01; OS05G0144800. DR KEGG; osa:4337788; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR HOGENOM; HOG000205390; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR Reactome; R-OSA-113418; Formation of the Early Elongation Complex. DR Reactome; R-OSA-5696395; Formation of Incision Complex in GG-NER. DR Reactome; R-OSA-5696400; Dual Incision in GG-NER. DR Reactome; R-OSA-674695; RNA Polymerase II Pre-transcription Events. DR Reactome; R-OSA-6781823; Formation of TC-NER Pre-Incision Complex. DR Reactome; R-OSA-6782135; Dual incision in TC-NER. DR Reactome; R-OSA-6782210; Gap-filling DNA repair synthesis and ligation in TC-NER. DR Reactome; R-OSA-72086; mRNA Capping. DR Reactome; R-OSA-73776; RNA Polymerase II Promoter Escape. DR Reactome; R-OSA-73779; RNA Polymerase II Transcription Pre-Initiation And Promoter Opening. DR Reactome; R-OSA-75953; RNA Polymerase II Transcription Initiation. DR Reactome; R-OSA-76042; RNA Polymerase II Transcription Initiation And Promoter Clearance. DR Reactome; R-OSA-77075; RNA Pol II CTD phosphorylation and interaction with CE. DR Proteomes; UP000059680; Chromosome 5, cultivar: Nipponbare. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0000724; P:double-strand break repair via homologous recombination; IEA:EnsemblPlants. DR GO; GO:0010286; P:heat acclimation; IEA:EnsemblPlants. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR GO; GO:0045893; P:positive regulation of transcription, DNA-templated; IEA:EnsemblPlants. DR GO; GO:0043687; P:post-translational protein modification; IEA:EnsemblPlants. DR GO; GO:0006457; P:protein folding; IEA:EnsemblPlants. DR GO; GO:0009644; P:response to high light intensity; IEA:EnsemblPlants. DR GO; GO:0042542; P:response to hydrogen peroxide; IEA:EnsemblPlants. DR GO; GO:0010212; P:response to ionizing radiation; IEA:EnsemblPlants. DR GO; GO:0009411; P:response to UV; IEA:EnsemblPlants. DR GO; GO:0000394; P:RNA splicing, via endonucleolytic cleavage and ligation; IEA:EnsemblPlants. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:EnsemblPlants. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000059680}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000059680}. FT DOMAIN 7 288 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 758 AA; 85524 MW; E36E4EB1B68C33A0 CRC64; MKFDLEGLTV HFPYAAIYPE QHAYMGELKR ALDARGHALL EMPTGTGKTS ALISLITSYS LASPSRPLRL IYCTRTVHEM EKTLAELRLL FAHLPAAASR SLLALGLSSR KNLCVHPQAS AAAARDSVDT ACRRLTASWV RDRAASDPDS TPLCDFFESF DRAAAAGDLA SYMPPGVYTL ADLRALGRDR GICPYFLARQ MVKYANVVVY SYQYLIDPKV ASIVSREMQK ECVVVFDEAH NIDNVCIEAL SVSIRKQTLE GAERNLRRIS QEIDRFKATD ANRLRAEYNR LVDGLAQRGN LPISDAWLAN PALPEDILKE AVPGNIRRAE HFLAVLRRLV RFLDGRLETE NVENEMPVAF VASIHSQAGI DQKMLRFCYD RLHSLMLTLE ITDTDEFMHI QTICDFATLI GTYTRGFSII IEPYDERMPD IRDPVIQLSC HDASLAIQPV FERFQTVVIT SGTLSPIDLY PRLLNFNPVI SRSFTMSLTR DCICPMVLTR GSDQLPVSTK FDMRSDPGVV RNYGRLLLEM ASAVPDGIVC FFVSYSYMDG IVNSWNEMGI LQDIMQHKLV FIETPDVVET TLALDNYRKA CDCGRGAIFF SVARGKVAEG IDFDRHYGRL VIMFGVPFQY TLSRILLARL EYLRETFQIK EGDFLTFDAL RQAAQCVGRV IRSKADYGMM IFADKRYSRH DKRSKLPGWI LSHLHDAHLN LSTDMALHIA REFLRRMAQP YDKTGSGGNK TLLTEEDLQN MAQDAMEM // ID Q6BIB6_DEBHA Unreviewed; 794 AA. AC Q6BIB6; DT 16-AUG-2004, integrated into UniProtKB/TrEMBL. DT 04-NOV-2008, sequence version 2. DT 11-MAY-2016, entry version 79. DE SubName: Full=DEHA2G12056p {ECO:0000313|EMBL:CAG90541.2}; GN OrderedLocusNames=DEHA2G12056g {ECO:0000313|EMBL:CAG90541.2}; OS Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC OS 0083 / IGC 2968) (Yeast) (Torulaspora hansenii). OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; OC Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Debaryomyces. OX NCBI_TaxID=284592 {ECO:0000313|EMBL:CAG90541.2, ECO:0000313|Proteomes:UP000000599}; RN [1] {ECO:0000313|EMBL:CAG90541.2, ECO:0000313|Proteomes:UP000000599} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968 RC {ECO:0000313|Proteomes:UP000000599}; RX PubMed=15229592; DOI=10.1038/nature02579; RG Genolevures; RA Dujon B., Sherman D., Fischer G., Durrens P., Casaregola S., RA Lafontaine I., de Montigny J., Marck C., Neuveglise C., Talla E., RA Goffard N., Frangeul L., Aigle M., Anthouard V., Babour A., Barbe V., RA Barnay S., Blanchin S., Beckerich J.M., Beyne E., Bleykasten C., RA Boisrame A., Boyer J., Cattolico L., Confanioleri F., de Daruvar A., RA Despons L., Fabre E., Fairhead C., Ferry-Dumazet H., Groppi A., RA Hantraye F., Hennequin C., Jauniaux N., Joyet P., Kachouri R., RA Kerrest A., Koszul R., Lemaire M., Lesur I., Ma L., Muller H., RA Nicaud J.M., Nikolski M., Oztas S., Ozier-Kalogeropoulos O., RA Pellenz S., Potier S., Richard G.F., Straub M.L., Suleau A., RA Swennene D., Tekaia F., Wesolowski-Louvel M., Westhof E., Wirth B., RA Zeniou-Meyer M., Zivanovic I., Bolotin-Fukuhara M., Thierry A., RA Bouchier C., Caudron B., Scarpelli C., Gaillardin C., Weissenbach J., RA Wincker P., Souciet J.L.; RT "Genome evolution in yeasts."; RL Nature 430:35-44(2004). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CR382139; CAG90541.2; -; Genomic_DNA. DR RefSeq; XP_462055.2; XM_462055.1. DR EnsemblFungi; CAG90541; CAG90541; DEHA2G12056g. DR GeneID; 2904966; -. DR KEGG; dha:DEHA2G12056g; -. DR HOGENOM; HOG000205390; -. DR InParanoid; Q6BIB6; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000000599; Chromosome G. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000000599}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000000599}. FT DOMAIN 7 294 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 794 AA; 91027 MW; 463633CB9A665E59 CRC64; MKFYIDDLPI LFPYPRIYPE QYAYMCDIKK TLDVGGNCIL EMPSGTGKTI SLLSITVAYQ MHYPEHRKVV YCSRTMSEIE KALIELHNLM KFRAEQLGYV EEFRGLGLSS RKNLCLHPTI SKERKGIVVD EKCRRVTNGQ LKKKIENGLI NTEQTQDPEA NALCSFHESL NEMDQHNLIP AGVYSFDALI NHCKEVGTCP YFTVRRMIPF CNIIIYSYHY LLDPKIADRV SKEISKDSII IFDEAHNIDN VCIESLSLDL TDDTLKRATR GANKLGDAVD DMKSQDSEKL QNEYEKLVEG LRQAEIARDE ELFMSNPTLP QDLLDEAIPG NIRKAEHFIS FLKRFIEYLK TRMKVLHVIS ETPISFLQHL KDLTFIDRKP LKFCSERLSL LVRTLELSEI EDFTALKDIA TFATLVSTYD TGFQLILEPF ETEGSTVPNP ILHFTCLDAS IAIKPVFERF SSVIITSGTI SPLDMYPKML NFQTVIQESY TMTLARRSFL PMIVTKGSDQ VSISSRFEIR NDPSVVRNYG SLLIEFAKIV PDGMVVFFPS YLYMESIISM WQNMGVLDEV WKYKLILVET PDAQETSLAL ETYRKACSNG RGAILLSVAR GKVSEGIDFD HHYGRTVLMI GIPFQYTESR ILKARLEFLR DHYQIRENDF LSFDAMRHAA QCLGRVLRGK DDYGIMVLAD RRFSRKKNQL PKWIAQALND SDTNLSTDMA LANAKKFLRS LAQPTNPNDQ EGVSVWNLEQ LEKFQREHQH QISAAEEKPK QENGNDNEED DEFMDIDDDD LALL // ID Q6C0Y5_YARLI Unreviewed; 785 AA. AC Q6C0Y5; DT 16-AUG-2004, integrated into UniProtKB/TrEMBL. DT 16-AUG-2004, sequence version 1. DT 11-MAY-2016, entry version 78. DE SubName: Full=YALI0F20746p {ECO:0000313|EMBL:CAG78486.1}; GN ORFNames=YALI0_F20746g {ECO:0000313|EMBL:CAG78486.1}; OS Yarrowia lipolytica (strain CLIB 122 / E 150) (Yeast) (Candida OS lipolytica). OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; OC Saccharomycetes; Saccharomycetales; Dipodascaceae; Yarrowia. OX NCBI_TaxID=284591 {ECO:0000313|EMBL:CAG78486.1, ECO:0000313|Proteomes:UP000001300}; RN [1] {ECO:0000313|EMBL:CAG78486.1, ECO:0000313|Proteomes:UP000001300} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=CLIB 122 / E 150 {ECO:0000313|Proteomes:UP000001300}; RX PubMed=15229592; DOI=10.1038/nature02579; RG Genolevures; RA Dujon B., Sherman D., Fischer G., Durrens P., Casaregola S., RA Lafontaine I., de Montigny J., Marck C., Neuveglise C., Talla E., RA Goffard N., Frangeul L., Aigle M., Anthouard V., Babour A., Barbe V., RA Barnay S., Blanchin S., Beckerich J.M., Beyne E., Bleykasten C., RA Boisrame A., Boyer J., Cattolico L., Confanioleri F., de Daruvar A., RA Despons L., Fabre E., Fairhead C., Ferry-Dumazet H., Groppi A., RA Hantraye F., Hennequin C., Jauniaux N., Joyet P., Kachouri R., RA Kerrest A., Koszul R., Lemaire M., Lesur I., Ma L., Muller H., RA Nicaud J.M., Nikolski M., Oztas S., Ozier-Kalogeropoulos O., RA Pellenz S., Potier S., Richard G.F., Straub M.L., Suleau A., RA Swennene D., Tekaia F., Wesolowski-Louvel M., Westhof E., Wirth B., RA Zeniou-Meyer M., Zivanovic I., Bolotin-Fukuhara M., Thierry A., RA Bouchier C., Caudron B., Scarpelli C., Gaillardin C., Weissenbach J., RA Wincker P., Souciet J.L.; RT "Genome evolution in yeasts."; RL Nature 430:35-44(2004). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CR382132; CAG78486.1; -; Genomic_DNA. DR RefSeq; XP_505677.1; XM_505677.1. DR ProteinModelPortal; Q6C0Y5; -. DR EnsemblFungi; CAG78486; CAG78486; YALI0_F20746g. DR GeneID; 2908576; -. DR KEGG; yli:YALI0F20746g; -. DR HOGENOM; HOG000205390; -. DR InParanoid; Q6C0Y5; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000001300; Chromosome F. DR GO; GO:0005829; C:cytosol; IEA:EnsemblFungi. DR GO; GO:0000112; C:nucleotide-excision repair factor 3 complex; IEA:EnsemblFungi. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0000717; P:nucleotide-excision repair, DNA duplex unwinding; IEA:EnsemblFungi. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000001300}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000001300}. FT DOMAIN 7 282 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 761 785 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 785 AA; 89773 MW; 67201FA67659A09E CRC64; MKFYIDDLPV LWPYPRIYPE QYAYMCDIKK TLDVGGNCIL EMPSGTGKTV SLLSLTVAYQ QHYPEHRKII YCSRTMSEIE KALAELKNLM KFRTETLGFE EDFRGLGLTS RKNLCLNPNV RYEKKGYIVD EKCRAMTSGI AKQKLAAGED VTLCEYHENM NDIEPHNYIP PGVFTFEDIL AYGEEHKTCP YFTVRRMMAF CNVIIYSYHY LLDPKIADRV SKELSKDCIV IFDEAHNIDN VCIEALSVDI TEDSLKRATR GANHLAKKVS EARSSDSEKL KNEYNKLVDG LRDLESGEQE DTFLANPVLP EDLISEAVPG NIRKAEHFVA FLKRFIEYLK SRMKVLHVIS ETPASFLKHL RDLTYIERKP LRFCAERLSY LVRTLELTHV DDYTALKEIA VFATLVSTYD TGFQLILEPF ETDQATVPNP ILHLTCLDAS IAIKPVFDRF SSIIITSGTI SPLDMYPKML NFETVVQESY TMTLARRAFC PLIVTKGSDQ VAISSRFEIR NDPSVVRNYG NLLIEFSKIT PDGLVVFFPS YLYMESIISM WQTMGILDEV WKYKLILVET PDAQETSLAL ETYRTACSNG RGAVMLCVAR GKVSEGIDFD HQFGRTVLMI GVPFQYTESR ILKARLEFLR DNYHIRENDF LSFDAMRHAA QCLGRVLRGK DDYGVMVLAD RRFAKKRNQL PKWINQAILD ADTNLSTDMA LAAAKKFLRT MAQPMNKEDQ EGVSVWSLEQ LQEYQGSKKD GGYRLAPEDA MDIDEKDLEE GLREVEQAKK EIAAR // ID Q6CSU5_KLULA Unreviewed; 778 AA. AC Q6CSU5; DT 16-AUG-2004, integrated into UniProtKB/TrEMBL. DT 16-AUG-2004, sequence version 1. DT 11-MAY-2016, entry version 83. DE SubName: Full=KLLA0C17776p {ECO:0000313|EMBL:CAH01845.1}; GN ORFNames=KLLA0_C17776g {ECO:0000313|EMBL:CAH01845.1}; OS Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC OS 1267 / NRRL Y-1140 / WM37) (Yeast) (Candida sphaerica). OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; OC Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Kluyveromyces. OX NCBI_TaxID=284590 {ECO:0000313|Proteomes:UP000000598}; RN [1] {ECO:0000313|EMBL:CAH01845.1, ECO:0000313|Proteomes:UP000000598} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / RC WM37 {ECO:0000313|Proteomes:UP000000598}; RX PubMed=15229592; DOI=10.1038/nature02579; RG Genolevures; RA Dujon B., Sherman D., Fischer G., Durrens P., Casaregola S., RA Lafontaine I., de Montigny J., Marck C., Neuveglise C., Talla E., RA Goffard N., Frangeul L., Aigle M., Anthouard V., Babour A., Barbe V., RA Barnay S., Blanchin S., Beckerich J.M., Beyne E., Bleykasten C., RA Boisrame A., Boyer J., Cattolico L., Confanioleri F., de Daruvar A., RA Despons L., Fabre E., Fairhead C., Ferry-Dumazet H., Groppi A., RA Hantraye F., Hennequin C., Jauniaux N., Joyet P., Kachouri R., RA Kerrest A., Koszul R., Lemaire M., Lesur I., Ma L., Muller H., RA Nicaud J.M., Nikolski M., Oztas S., Ozier-Kalogeropoulos O., RA Pellenz S., Potier S., Richard G.F., Straub M.L., Suleau A., RA Swennene D., Tekaia F., Wesolowski-Louvel M., Westhof E., Wirth B., RA Zeniou-Meyer M., Zivanovic I., Bolotin-Fukuhara M., Thierry A., RA Bouchier C., Caudron B., Scarpelli C., Gaillardin C., Weissenbach J., RA Wincker P., Souciet J.L.; RT "Genome evolution in yeasts."; RL Nature 430:35-44(2004). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CR382123; CAH01845.1; -; Genomic_DNA. DR RefSeq; XP_452994.1; XM_452994.1. DR ProteinModelPortal; Q6CSU5; -. DR STRING; 284590.XP_452994.1; -. DR EnsemblFungi; CAH01845; CAH01845; KLLA0_C17776g. DR GeneID; 2892527; -. DR KEGG; kla:KLLA0C17776g; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR HOGENOM; HOG000205390; -. DR InParanoid; Q6CSU5; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000000598; Chromosome C. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000000598}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000000598}. FT DOMAIN 7 285 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 778 AA; 89476 MW; 41EB542CEFC46E18 CRC64; MKFYIDDLPV LFPYPKIYPE QYQYMCDIKK TLDAGGNSIL EMPSGTGKTV SLLSLTVAYQ MHYPEHRKII YCSRTMSEIE KALVELESLM DYRSKELGFV EDFRGLGLTS RKNLCLHPRV SKERKGNVVD EKCRRMTNGQ ARKKKEENPD ANVELCDYHE NMYNYDVADY LPPGVFSFER LIRFCEEKRM CPYFTVRRMI SMCNIIIYSY HYLLDPKIAE RVSKEVSKDA IVIFDEAHNI DNVCIESLSL DLTKDLLKKA TKGANALDRK VEEMKKVDSQ KLQDEYEKLV HGLRASDILE PEEEPLVETP VLSNDILKEA IPGNIRRATH FISFLKRFIE YLKTRMKVLH VISETPNSFL LHLKQLTFIE RKPLRFCSER LSLLVRTLEV EEVEEFNALK DIATFATLIS TYEDGFLLII EPYEIENAAV PNPIVRFTCL DASIAIKPIF ERFSSVIITS GTISPLDMYP KMLNFETVLQ QSYSMTLAKK SFLPMILTKG SDQVAISSRF EIRNDPSIVR NYGSMLVEFA KITPDGLVVF FPSYLYMESI ISMWQTMGIL DEVWKYKLIL VETPDAQETA LALETYRKAC SNGRGAILLS VARGKVSEGI DFDHQYGRTV LMIGIPFQYT ESRILKARLE FLRENYQIRE NDFLSFDAMR HAAQCLGRVL RGKDDYGVMV LADRRFARKK SQLPKWIAQG LSDADMNLST DMAIANTKQF LRTMAQPTDP KDQEGVSVWS HAQLLAHQES VKKKQHNGFV DSDVTEVKDN DGDIEMKD // ID Q6FKF8_CANGA Unreviewed; 775 AA. AC Q6FKF8; DT 19-JUL-2004, integrated into UniProtKB/TrEMBL. DT 19-JUL-2004, sequence version 1. DT 11-MAY-2016, entry version 82. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CAG62260.1}; GN OrderedLocusNames=CAGL0L11924g {ECO:0000313|CGD:CAL0135230, GN ECO:0000313|EMBL:CAG62260.1}; OS Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / OS NRRL Y-65) (Yeast) (Torulopsis glabrata). OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; OC Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Nakaseomyces; OC Nakaseomyces/Candida clade. OX NCBI_TaxID=284593 {ECO:0000313|Proteomes:UP000002428}; RN [1] {ECO:0000313|EMBL:CAG62260.1, ECO:0000313|Proteomes:UP000002428} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65 RC {ECO:0000313|Proteomes:UP000002428}; RX PubMed=15229592; DOI=10.1038/nature02579; RG Genolevures; RA Dujon B., Sherman D., Fischer G., Durrens P., Casaregola S., RA Lafontaine I., de Montigny J., Marck C., Neuveglise C., Talla E., RA Goffard N., Frangeul L., Aigle M., Anthouard V., Babour A., Barbe V., RA Barnay S., Blanchin S., Beckerich J.M., Beyne E., Bleykasten C., RA Boisrame A., Boyer J., Cattolico L., Confanioleri F., de Daruvar A., RA Despons L., Fabre E., Fairhead C., Ferry-Dumazet H., Groppi A., RA Hantraye F., Hennequin C., Jauniaux N., Joyet P., Kachouri R., RA Kerrest A., Koszul R., Lemaire M., Lesur I., Ma L., Muller H., RA Nicaud J.M., Nikolski M., Oztas S., Ozier-Kalogeropoulos O., RA Pellenz S., Potier S., Richard G.F., Straub M.L., Suleau A., RA Swennene D., Tekaia F., Wesolowski-Louvel M., Westhof E., Wirth B., RA Zeniou-Meyer M., Zivanovic I., Bolotin-Fukuhara M., Thierry A., RA Bouchier C., Caudron B., Scarpelli C., Gaillardin C., Weissenbach J., RA Wincker P., Souciet J.L.; RT "Genome evolution in yeasts."; RL Nature 430:35-44(2004). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CR380958; CAG62260.1; -; Genomic_DNA. DR RefSeq; XP_449286.1; XM_449286.1. DR ProteinModelPortal; Q6FKF8; -. DR STRING; 284593.XP_449286.1; -. DR EnsemblFungi; CAG62260; CAG62260; CAGL0L11924g. DR GeneID; 2890950; -. DR KEGG; cgr:CAGL0L11924g; -. DR CGD; CAL0135230; CAGL0L11924g. DR EuPathDB; FungiDB:CAGL0L11924g; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; Q6FKF8; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000002428; Chromosome L. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000002428}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000002428}. FT DOMAIN 7 286 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 775 AA; 89366 MW; 9D7B36D21C96D223 CRC64; MKFFIDDLPV LFPYPKIYPE QYQYMRDIKR TLDAGGNSIL EMPSGTGKTV SLLSLTIAYQ MHYPEHRKII YCSRTMSEIE KALVELENLM DYRAKELGFK EEFRGLGLTS RKNLCLHPEV SKERSGTIVD EKCRRMTNGQ AKKKLEEDPE ANVELCDYHE NLYQLDVENY LPNGVFSFEK LIKYCEQKVL CPYFIVRRMI SMCNIIIYSY HYLLDPKIAE RVSHEVSKDS IVIFDEAHNI DNVCIESLSL DLTNDVLRKA TKGANTLNER IAEARQVDAR KLQDEYEKLV QGLHAEDIMT QTEEPFVETP VLPQDLLKEA IPGNIRRAEH FISFLKRLIE YLKTRMKVLH VISETPRSFL QHLKQLTFID RKPLRFCSER LSLLVRTLEI EDVEEFAALK DIATFATLVS TYEDGFTLII EPYEIENAAV PNPIMRFTCL DASIAIKPVF ERFSSVIITS GTISPLDMYP RMLNFETVLQ KSYSMSLAKK SFLPMIVTKG SDQVAISSRF EIRNDPSIVR NYGSMLVEFA KITPDGMVVF FPSYLYMESI VSMWQTMGIL DEVWKHKLIL VETPDAQETS LALETYRKAC SNGRGAILLS VARGKVSEGI DFDHQYGRTV LMIGIPFQYT ESRILKARLE FMRENYRIRE NDFLSFDAMR HAAQCLGRVL RGKDDYGVMI LADRRFSRKR NQLPKWIAQG LSEADLNLST DMAISNAKQF LRTMAQPTDP KDQQGVSVWS YNDLIKYQND HEKKNNASAG MLHDDEDINM IADEE // ID Q74ZT4_ASHGO Unreviewed; 774 AA. AC Q74ZT4; DT 05-JUL-2004, integrated into UniProtKB/TrEMBL. DT 05-JUL-2004, sequence version 1. DT 11-MAY-2016, entry version 88. DE SubName: Full=AGR114Cp {ECO:0000313|EMBL:AAS54604.1}; GN ORFNames=AGOS_AGR114C {ECO:0000313|EMBL:AAS54604.1}; OS Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL OS Y-1056) (Yeast) (Eremothecium gossypii). OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; OC Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Eremothecium. OX NCBI_TaxID=284811 {ECO:0000313|EMBL:AAS54604.1, ECO:0000313|Proteomes:UP000000591}; RN [1] {ECO:0000313|EMBL:AAS54604.1, ECO:0000313|Proteomes:UP000000591} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056 RC {ECO:0000313|Proteomes:UP000000591}; RX PubMed=15001715; DOI=10.1126/science.1095781; RA Dietrich F.S., Voegeli S., Brachat S., Lerch A., Gates K., Steiner S., RA Mohr C., Pohlmann R., Luedi P., Choi S., Wing R.A., Flavier A., RA Gaffney T.D., Philippsen P.; RT "The Ashbya gossypii genome as a tool for mapping the ancient RT Saccharomyces cerevisiae genome."; RL Science 304:304-307(2004). RN [2] {ECO:0000313|Proteomes:UP000000591} RP GENOME REANNOTATION. RC STRAIN=ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056 RC {ECO:0000313|Proteomes:UP000000591}; RX PubMed=23749448; DOI=10.1534/g3.112.002881; RA Dietrich F.S., Voegeli S., Kuo S., Philippsen P.; RT "Genomes of Ashbya fungi isolated from insects reveal four mating-type RT loci, numerous translocations, lack of transposons, and distinct gene RT duplications."; RL G3 (Bethesda) 3:1225-1239(2013). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AE016820; AAS54604.1; -; Genomic_DNA. DR RefSeq; NP_986780.1; NM_211842.1. DR ProteinModelPortal; Q74ZT4; -. DR EnsemblFungi; AAS54604; AAS54604; AGOS_AGR114C. DR GeneID; 4623082; -. DR KEGG; ago:AGOS_AGR114C; -. DR HOGENOM; HOG000205390; -. DR InParanoid; Q74ZT4; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000000591; Chromosome VII. DR GO; GO:0005829; C:cytosol; IEA:EnsemblFungi. DR GO; GO:0000112; C:nucleotide-excision repair factor 3 complex; IEA:EnsemblFungi. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0000717; P:nucleotide-excision repair, DNA duplex unwinding; IEA:EnsemblFungi. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000000591}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000000591}. FT DOMAIN 7 285 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 774 AA; 89223 MW; 74C730CD33C3BFA7 CRC64; MKFFIDDLPV IFPYPKIYPE QYQYMCDIKK TLDAGGNSIL EMPSGTGKTV SLLALTVAYQ MHYKEHRKII YCSRTMSEIE KALVELESLM DYRAKELQYQ EEFRGLGLTS RKNLCLHPRV SKERKGTVVD EKCRRMTNGQ ARARKQQDPE ANVELCNYHE NMYNYSPEEY LPLGVYSFEK LIRYCEDKTL CPYFTVRRMI SMCNIIIYSY HYLLDPKIEE RVSREVSKDA IVIFDEAHNI DNVCIESLSL DLTKDLLKRA SKGASVLGKK VEEVRRVDTK KLQDEYDKLV QGLRANDIME ENEEPLVESP VLPADILKDA VPGNIRRAEH FVAFLKRFIE YLKTRMKVLH VISETPNSFL QHLKQLTFID RKPLRYCAER LSLLARTLEI DEVEEFNALK DIATFATLIS TYESGFLLII EPYEIENAAV PNPIMRFTCL DASIAIKPVF EKFSSVIITS GTISPLDMYP RMLNFETVLQ KSYSMTLAQK SFLPMIITKG SDQVAISSRF EIRNDPSIVR NYGSILVEFA KITPDGMVVF FPSYLYMESI ISTWQTMGIL DEVWKYKLIL VETPDAQETS LALETYRKAC SNGRGAILLS VARGKISEGI DFDHHYGRTV LMIGIPFQYT ESRILKARLE FLRENYQIRE NDFLSFDAMR HAAQCLGRVL RGKDDYGVMV LADRRFSRKK NQLPKWIAQG LSDADLNLST DMAIANTKQF LRTMAQATDP KDHEGVSVWN IKQLLAYQQE QKRRKGTMGV IEEEVDEDIE LPDA // ID Q7KVP9_DROME Unreviewed; 769 AA. AC Q7KVP9; DT 05-JUL-2004, integrated into UniProtKB/TrEMBL. DT 05-JUL-2004, sequence version 1. DT 11-MAY-2016, entry version 108. DE SubName: Full=Xeroderma pigmentosum D ortholog {ECO:0000313|EMBL:AAM70857.2}; DE EC=3.6.1.- {ECO:0000313|EMBL:AAM70857.2}; GN Name=Xpd {ECO:0000313|EMBL:AAM70857.2, GN ECO:0000313|FlyBase:FBgn0261850}; GN ORFNames=CG9433 {ECO:0000313|FlyBase:FBgn0261850}, GN Dmel_CG9433 {ECO:0000313|EMBL:AAM70857.2}; OS Drosophila melanogaster (Fruit fly). OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; OC Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; OC Ephydroidea; Drosophilidae; Drosophila; Sophophora. OX NCBI_TaxID=7227 {ECO:0000313|EMBL:AAM70857.2, ECO:0000313|Proteomes:UP000000803}; RN [1] {ECO:0000313|EMBL:AAM70857.2, ECO:0000313|Proteomes:UP000000803} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803}; RX PubMed=10731132; DOI=10.1126/science.287.5461.2185; RA Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., RA Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., RA George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., RA Sutton G.G., Wortman J.R., Yandell M.D., Zhang Q., Chen L.X., RA Brandon R.C., Rogers Y.H., Blazej R.G., Champe M., Pfeiffer B.D., RA Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Gabor G.L., RA Abril J.F., Agbayani A., An H.J., Andrews-Pfannkoch C., Baldwin D., RA Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., RA Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., RA Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., RA Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., RA Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., RA de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., RA Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., RA Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., RA Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., RA Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., RA Harris N.L., Harvey D., Heiman T.J., Hernandez J.R., Houck J., RA Hostin D., Houston K.A., Howland T.J., Wei M.H., Ibegwam C., RA Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., RA Kimmel B.E., Kodira C.D., Kraft C., Kravitz S., Kulp D., Lai Z., RA Lasko P., Lei Y., Levitsky A.A., Li J., Li Z., Liang Y., Lin X., RA Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., RA Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., RA Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., RA Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., RA Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., RA Reinert K., Remington K., Saunders R.D., Scheeler F., Shen H., RA Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T., RA Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., RA Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., RA Wang Z.Y., Wassarman D.A., Weinstock G.M., Weissenbach J., RA Williams S.M., WoodageT, Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., RA Yeh R.F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., RA Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S., Zhu X., Smith H.O., RA Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.; RT "The genome sequence of Drosophila melanogaster."; RL Science 287:2185-2195(2000). RN [2] {ECO:0000313|EMBL:AAM70857.2, ECO:0000313|Proteomes:UP000000803} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803}; RX PubMed=12537568; RA Celniker S.E., Wheeler D.A., Kronmiller B., Carlson J.W., Halpern A., RA Patel S., Adams M., Champe M., Dugan S.P., Frise E., Hodgson A., RA George R.A., Hoskins R.A., Laverty T., Muzny D.M., Nelson C.R., RA Pacleb J.M., Park S., Pfeiffer B.D., Richards S., Sodergren E.J., RA Svirskas R., Tabor P.E., Wan K., Stapleton M., Sutton G.G., Venter C., RA Weinstock G., Scherer S.E., Myers E.W., Gibbs R.A., Rubin G.M.; RT "Finishing a whole-genome shotgun: release 3 of the Drosophila RT melanogaster euchromatic genome sequence."; RL Genome Biol. 3:RESEARCH0079-RESEARCH0079(2002). RN [3] {ECO:0000313|EMBL:AAM70857.2, ECO:0000313|Proteomes:UP000000803} RP NUCLEOTIDE SEQUENCE. RC STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803}; RX PubMed=12537572; DOI=10.1186/gb-2002-3-12-research0083; RA Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., RA Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., RA Smith C.D., Tupy J.L., Whitfied E.J., Bayraktaroglu L., Berman B.P., RA Bettencourt B.R., Celniker S.E., de Grey A.D., Drysdale R.A., RA Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., RA Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., RA Lewis S.E.; RT "Annotation of the Drosophila melanogaster euchromatic genome: a RT systematic review."; RL Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002). RN [4] {ECO:0000313|EMBL:AAM70857.2, ECO:0000313|Proteomes:UP000000803} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803}; RX PubMed=12537573; RA Kaminker J.S., Bergman C.M., Kronmiller B., Carlson J., Svirskas R., RA Patel S., Frise E., Wheeler D.A., Lewis S.E., Rubin G.M., RA Ashburner M., Celniker S.E.; RT "The transposable elements of the Drosophila melanogaster euchromatin: RT a genomics perspective."; RL Genome Biol. 3:RESEARCH0084-RESEARCH0084(2002). RN [5] {ECO:0000313|EMBL:AAM70857.2, ECO:0000313|Proteomes:UP000000803} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803}; RX PubMed=12537574; RA Hoskins R.A., Smith C.D., Carlson J.W., Carvalho A.B., Halpern A., RA Kaminker J.S., Kennedy C., Mungall C.J., Sullivan B.A., Sutton G.G., RA Yasuhara J.C., Wakimoto B.T., Myers E.W., Celniker S.E., Rubin G.M., RA Karpen G.H.; RT "Heterochromatic sequences in a Drosophila whole-genome shotgun RT assembly."; RL Genome Biol. 3:RESEARCH0085-RESEARCH0085(2002). RN [6] {ECO:0000313|EMBL:AAM70857.2, ECO:0000313|Proteomes:UP000000803} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803}; RX PubMed=16110336; DOI=10.1371/journal.pcbi.0010022; RA Quesneville H., Bergman C.M., Andrieu O., Autard D., Nouaud D., RA Ashburner M., Anxolabehere D.; RT "Combined evidence annotation of transposable elements in genome RT sequences."; RL PLoS Comput. Biol. 1:166-175(2005). RN [7] {ECO:0000313|EMBL:AAM70857.2, ECO:0000313|Proteomes:UP000000803} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803}; RX PubMed=17569856; DOI=10.1126/science.1139815; RA Smith C.D., Shu S., Mungall C.J., Karpen G.H.; RT "The Release 5.1 annotation of Drosophila melanogaster RT heterochromatin."; RL Science 316:1586-1591(2007). RN [8] {ECO:0000313|EMBL:AAM70857.2, ECO:0000313|Proteomes:UP000000803} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803}; RX PubMed=17569867; DOI=10.1126/science.1139816; RA Hoskins R.A., Carlson J.W., Kennedy C., Acevedo D., Evans-Holm M., RA Frise E., Wan K.H., Park S., Mendez-Lago M., Rossi F., Villasante A., RA Dimitri P., Karpen G.H., Celniker S.E.; RT "Sequence finishing and mapping of Drosophila melanogaster RT heterochromatin."; RL Science 316:1625-1628(2007). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AE013599; AAM70857.2; -; Genomic_DNA. DR RefSeq; NP_726036.2; NM_166429.3. DR ProteinModelPortal; Q7KVP9; -. DR SMR; Q7KVP9; 36-89. DR IntAct; Q7KVP9; 1. DR STRING; 7227.FBpp0071503; -. DR PaxDb; Q7KVP9; -. DR PRIDE; Q7KVP9; -. DR EnsemblMetazoa; FBtr0071576; FBpp0071503; FBgn0261850. DR GeneID; 37414; -. DR KEGG; dme:Dmel_CG9433; -. DR UCSC; CG9433-RA; d. melanogaster. DR CTD; 37414; -. DR FlyBase; FBgn0261850; Xpd. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR GeneTree; ENSGT00550000075092; -. DR InParanoid; Q7KVP9; -. DR KO; K10844; -. DR OMA; LVVCNYH; -. DR PhylomeDB; Q7KVP9; -. DR Reactome; R-DME-112382; Formation of RNA Pol II elongation complex. DR Reactome; R-DME-113418; Formation of the Early Elongation Complex. DR Reactome; R-DME-5696395; Formation of Incision Complex in GG-NER. DR Reactome; R-DME-5696400; Dual Incision in GG-NER. DR Reactome; R-DME-674695; RNA Polymerase II Pre-transcription Events. DR Reactome; R-DME-6781823; Formation of TC-NER Pre-Incision Complex. DR Reactome; R-DME-6782135; Dual incision in TC-NER. DR Reactome; R-DME-6782210; Gap-filling DNA repair synthesis and ligation in TC-NER. DR Reactome; R-DME-72086; mRNA Capping. DR Reactome; R-DME-73772; RNA Polymerase I Promoter Escape. DR Reactome; R-DME-73776; RNA Polymerase II Promoter Escape. DR Reactome; R-DME-73777; RNA Polymerase I Chain Elongation. DR Reactome; R-DME-73779; RNA Polymerase II Transcription Pre-Initiation And Promoter Opening. DR Reactome; R-DME-75953; RNA Polymerase II Transcription Initiation. DR Reactome; R-DME-75955; RNA Polymerase II Transcription Elongation. DR Reactome; R-DME-76042; RNA Polymerase II Transcription Initiation And Promoter Clearance. DR Reactome; R-DME-77075; RNA Pol II CTD phosphorylation and interaction with CE. DR GenomeRNAi; 37414; -. DR NextBio; 803510; -. DR Proteomes; UP000000803; Chromosome 2R. DR Bgee; Q7KVP9; -. DR ExpressionAtlas; Q7KVP9; differential. DR GO; GO:0000439; C:core TFIIH complex; IDA:FlyBase. DR GO; GO:0005737; C:cytoplasm; IDA:FlyBase. DR GO; GO:0005675; C:holo TFIIH complex; IPI:FlyBase. DR GO; GO:0005634; C:nucleus; IDA:FlyBase. DR GO; GO:0005700; C:polytene chromosome; IDA:FlyBase. DR GO; GO:0005705; C:polytene chromosome interband; IDA:FlyBase. DR GO; GO:0005703; C:polytene chromosome puff; IDA:FlyBase. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0043141; F:ATP-dependent 5'-3' DNA helicase activity; IDA:FlyBase. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0004386; F:helicase activity; ISS:FlyBase. DR GO; GO:0006974; P:cellular response to DNA damage stimulus; IDA:FlyBase. DR GO; GO:0032508; P:DNA duplex unwinding; IDA:GOC. DR GO; GO:0010972; P:negative regulation of G2/M transition of mitotic cell cycle; IDA:FlyBase. DR GO; GO:0006289; P:nucleotide-excision repair; IDA:FlyBase. DR GO; GO:0001111; P:promoter clearance from RNA polymerase II promoter; ISS:FlyBase. DR GO; GO:0051983; P:regulation of chromosome segregation; IMP:FlyBase. DR GO; GO:0007088; P:regulation of mitotic nuclear division; IMP:FlyBase. DR GO; GO:1903506; P:regulation of nucleic acid-templated transcription; IC:GOC. DR GO; GO:0007348; P:regulation of syncytial blastoderm mitotic cell cycle; IMP:FlyBase. DR GO; GO:0009411; P:response to UV; IDA:FlyBase. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IDA:FlyBase. DR GO; GO:0006367; P:transcription initiation from RNA polymerase II promoter; ISS:FlyBase. DR GO; GO:0001113; P:transcriptional open complex formation at RNA polymerase II promoter; ISS:FlyBase. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 1: Evidence at protein level; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000000803}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Proteomics identification {ECO:0000213|PeptideAtlas:Q7KVP9}; KW Reference proteome {ECO:0000313|Proteomes:UP000000803}. FT DOMAIN 7 285 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 769 AA; 88011 MW; CA6BE91A2D5618E4 CRC64; MKLSVDGLLV YFPYEYIYPE QYAYMLELKR SLDAKGHCLL EMPSGTGKTA TLLSLIVAYM VEHPETVRKL IYCSRTVPEI EKVIAELQNL MVYYERHCPN PPPFTGLVLS SRKNMCIHPE VSKEREGKAV DGKCYGLTAS YIRERHEMDT ETPICQYFEG FSLEGKESTL PVGVYSIDDL KEYGRSRNWC PYFLARYAIA HAHIVVYSYH YLLDPKIAQV VSKEMSRESC VVFDEAHNID NVCIDSMSVK INRRTVERST NALNHLTKLV QDIREEDTNR LNEEYQRMVQ GLKDASVQRD TDMILANPVL PNDVLTEVVP GNIRNADHFL SFLRRFIEYI KTRLRVHHVV QESPAGFLKD ISSKICIERK PLRFCAERLS SLLRTLEISD LTEYGALTLI THFATLVSTY TKGFTIIIEP FDDKTPTVSN PILHFSCLDS SIAMAPVFSR FQTVVITSGT LSPMDMYPKI LDFDPVVMSS FTMTLARPCL LPMIVSKGND QVTISSKFET REDTAVIRNY GQLLVEVAKT VPDGIVCFFT SYLYLESVVA SWYDQGIVDT LLRYKLLFIE TQDNAETSYA LMNYVKACDC GRGAVLLAVA RGKVSEGVDF DHHYGRAVLM FGIPYVYTQS RILKARLDYL RDQFQIREND FLTFDAMRHA AQCVGRALRG KTDYGIMIFA DKRFSRHDKR SRLPKWIQEH LVDSFCNLST EEAVQLARRW LRRMAQPFTR EDQLGISLLT LAQLENMEQE KLERQAQGKQ GVGGEVQEL // ID Q7QD77_ANOGA Unreviewed; 760 AA. AC Q7QD77; DT 15-DEC-2003, integrated into UniProtKB/TrEMBL. DT 27-JUL-2011, sequence version 4. DT 11-MAY-2016, entry version 89. DE SubName: Full=AGAP002988-PA {ECO:0000313|EMBL:EAA08105.4}; GN ORFNames=AgaP_AGAP002988 {ECO:0000313|EMBL:EAA08105.4}; OS Anopheles gambiae (African malaria mosquito). OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; OC Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; OC Culicidae; Anophelinae; Anopheles. OX NCBI_TaxID=7165 {ECO:0000313|Proteomes:UP000007062}; RN [1] {ECO:0000313|EMBL:EAA08105.4, ECO:0000313|Proteomes:UP000007062} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=PEST {ECO:0000313|EMBL:EAA08105.4, RC ECO:0000313|Proteomes:UP000007062}; RX PubMed=12364791; DOI=10.1126/science.1076181; RA Holt R.A., Subramanian G.M., Halpern A., Sutton G.G., Charlab R., RA Nusskern D.R., Wincker P., Clark A.G., Ribeiro J.M.C., Wides R., RA Salzberg S.L., Loftus B.J., Yandell M.D., Majoros W.H., Rusch D.B., RA Lai Z., Kraft C.L., Abril J.F., Anthouard V., Arensburger P., RA Atkinson P.W., Baden H., de Berardinis V., Baldwin D., Benes V., RA Biedler J., Blass C., Bolanos R., Boscus D., Barnstead M., Cai S., RA Center A., Chaturverdi K., Christophides G.K., Chrystal M.A.M., RA Clamp M., Cravchik A., Curwen V., Dana A., Delcher A., Dew I., RA Evans C.A., Flanigan M., Grundschober-Freimoser A., Friedli L., Gu Z., RA Guan P., Guigo R., Hillenmeyer M.E., Hladun S.L., Hogan J.R., RA Hong Y.S., Hoover J., Jaillon O., Ke Z., Kodira C.D., Kokoza E., RA Koutsos A., Letunic I., Levitsky A.A., Liang Y., Lin J.-J., Lobo N.F., RA Lopez J.R., Malek J.A., McIntosh T.C., Meister S., Miller J.R., RA Mobarry C., Mongin E., Murphy S.D., O'Brochta D.A., Pfannkoch C., RA Qi R., Regier M.A., Remington K., Shao H., Sharakhova M.V., RA Sitter C.D., Shetty J., Smith T.J., Strong R., Sun J., Thomasova D., RA Ton L.Q., Topalis P., Tu Z.J., Unger M.F., Walenz B., Wang A.H., RA Wang J., Wang M., Wang X., Woodford K.J., Wortman J.R., Wu M., Yao A., RA Zdobnov E.M., Zhang H., Zhao Q., Zhao S., Zhu S.C., Zhimulev I., RA Coluzzi M., della Torre A., Roth C.W., Louis C., Kalush F., RA Mural R.J., Myers E.W., Adams M.D., Smith H.O., Broder S., RA Gardner M.J., Fraser C.M., Birney E., Bork P., Brey P.T., Venter J.C., RA Weissenbach J., Kafatos F.C., Collins F.H., Hoffman S.L.; RT "The genome sequence of the malaria mosquito Anopheles gambiae."; RL Science 298:129-149(2002). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:EAA08105.4}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AAAB01008859; EAA08105.4; -; Genomic_DNA. DR RefSeq; XP_311900.4; XM_311900.5. DR STRING; 7165.AGAP002988-PA; -. DR PaxDb; Q7QD77; -. DR EnsemblMetazoa; AGAP002988-RA; AGAP002988-PA; AGAP002988. DR GeneID; 1272969; -. DR KEGG; aga:AgaP_AGAP002988; -. DR VectorBase; AGAP002988; Anopheles gambiae. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR HOGENOM; HOG000205390; -. DR InParanoid; Q7QD77; -. DR KO; K10844; -. DR OrthoDB; EOG70W3CM; -. DR PhylomeDB; Q7QD77; -. DR Proteomes; UP000007062; Chromosome 2R. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000007062}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000007062}. FT DOMAIN 7 283 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 256 283 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 760 AA; 87175 MW; FA2F010B9318AA1F CRC64; MRISVDGLLV YFPYEYIYPE QYAYMLELKR TFDAKGHCLL EMPSGTGKTT TLLSLIVAYI LENPHVVRKL IYCSRTVPEI EKVIAELKHL MNYYEKQTGA MPNITGLVLS SRKNMCIHPE VSREREGKIV DARCYGMTAS YVRERAAHDE SAPVCQYYEG FQAEGKENML PPGVYSIDDL KEFGRERNWC PYFLSRFAIN QAHVVVYSYY YLLDPKVAEV VSKELARESV VVCDEAHNID NVCVDSMSVK INRRLIERST TGIHNLEKKV AELKEDDKRR LNEEYVRLVQ GLKDASFARE TDMVLANPVL PNEVIREVVP GNIRNADHFL SFLKRFIEYI KSRLRVQHVV QESPAGFLRD VQQKVCIERK PLRFCADRLQ SLLRTLEITD LSEYGPLSVI TSFATLVSTY TKGFTIIIEP FDDKTPTVSN PIMHFSCLDS SIAMKPIFQR FQSVVITSGT LSPMDMYPKI LDFEPVVMSS FTMTLARPCL LPMIVARGND QVAISSRFET REDTAVTRNY GQLLVETAKT VPDGVVCFFT SYLYLESVVA SWYDQGIIDT LLRYKLLFIE TQDNAETSYA LMNYVKACEC GRGAVLLAVA RGKVSEGVDF DHHLGRAVLM FGIPYVYTQS RILKARLDYL RDQFQIREND FLTFDALRHA AQCVGRAIRG KTDYGIMIFA DKRFSRQDKR GKLPKWIQEH LTDNLSNLST EESMQLAKRW LRQMAQPFTR EDQLGVSLLT LEQLQSMERE KLEKQAQGKQ // ID Q7RRI1_PLAYO Unreviewed; 1032 AA. AC Q7RRI1; DT 15-DEC-2003, integrated into UniProtKB/TrEMBL. DT 15-DEC-2003, sequence version 1. DT 11-MAY-2016, entry version 72. DE SubName: Full=RAD3-like DNA helicase-related {ECO:0000313|EMBL:EAA18094.1}; GN ORFNames=PY00738 {ECO:0000313|EMBL:EAA18094.1}; OS Plasmodium yoelii yoelii. OC Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; OC Plasmodiidae; Plasmodium; Plasmodium (Vinckeia). OX NCBI_TaxID=73239 {ECO:0000313|EMBL:EAA18094.1, ECO:0000313|Proteomes:UP000008553}; RN [1] {ECO:0000313|EMBL:EAA18094.1, ECO:0000313|Proteomes:UP000008553} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=17XNL {ECO:0000313|EMBL:EAA18094.1, RC ECO:0000313|Proteomes:UP000008553}; RX PubMed=12368865; DOI=10.1038/nature01099; RA Carlton J.M., Angiuoli S.V., Suh B.B., Kooij T.W., Pertea M., RA Silva J.C., Ermolaeva M.D., Allen J.E., Selengut J.D., Koo H.L., RA Peterson J.D., Pop M., Kosack D.S., Shumway M.F., Bidwell S.L., RA Shallom S.J., van Aken S.E., Riedmuller S.B., Feldblyum T.V., RA Cho J.K., Quackenbush J., Sedegah M., Shoaibi A., Cummings L.M., RA Florens L., Yates J.R., Raine J.D., Sinden R.E., Harris M.A., RA Cunningham D.A., Preiser P.R., Bergman L.W., Vaidya A.B., RA van Lin L.H., Janse C.J., Waters A.P., Smith H.O., White O.R., RA Salzberg S.L., Venter J.C., Fraser C.M., Hoffman S.L., Gardner M.J., RA Carucci D.J.; RT "Genome sequence and comparative analysis of the model rodent malaria RT parasite Plasmodium yoelii yoelii."; RL Nature 419:512-519(2002). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:EAA18094.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AABL01000196; EAA18094.1; -; Genomic_DNA. DR RefSeq; XP_726529.1; XM_721436.1. DR STRING; 352914.XP_726529.1; -. DR EnsemblProtists; EAA18094; EAA18094; EAA18094. DR GeneID; 3791869; -. DR KEGG; pyo:PY00738; -. DR EuPathDB; PlasmoDB:PY00738; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR InParanoid; Q7RRI1; -. DR KO; K10844; -. DR Proteomes; UP000008553; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR006935; Helicase/UvrB_N. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR Pfam; PF04851; ResIII; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EAA18094.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000008553}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EAA18094.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EAA18094.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EAA18094.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000008553}. FT DOMAIN 8 429 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 1032 AA; 119543 MW; F109EC173653D52B CRC64; MVVFYLDNLE IFFPYDYIYP EQYAYMKYLK KTLDSEGHCV LEMPTGTGKT VAIFSLITSY QYYKNDNSKF IFCTRTVAEM EKSLIELKKV INYRINIIKK RNELSEKISK SNIKEDSDTI KNENSDTIKN ENSDTIRNEN SDTIKNENSD MIRNESSDMI RNESSDMIRN ENNDEDDNIS SRFGKNSEIL AMGISARRCM CVNDKVLLKH EREKIDEECR KLTATFVREK KYISKKLNNF SNSNIDRISD FIIKNKHHID MEDYFNIYNS KNSINEYNDL GLCGYFENYK KNFVYELIEP GVYTIEELKE ICKNYKNSEN INTPICPYFC AKKIIEIAKV VVLNYQYIID PKVSKSIFLG KDINNRVNYK KNDIIVFDEA HNIDSVCLEA LSVNIDRSIL NKATMNITTL FKKIEKSRIV NENKLKEECY NILNKIKSGK EASNFKLNQN GEEVDGNNQI SENDNGTNLE NLESQNRRSK QDEVYFDEEM NLVFKGLLEE ASSDRAEKNG GKNHEKNDEK NGGKNDEKND EKNDGEKISD KVIIDDLKEI LNMNNSDDNE KNDLKSKENF NLEEINYSPL LMEDIIKNIV MPGNIRKSEH FLNLMRIVVV YLKKYINIYE VTSEGPLSFL YKCEKDTKLD TSFFKYSFDR LKNLLNTLQV VDTDDYAALN IVCNFCTLIG NYFKGFIIIC EPYPEATGIY DPVIQFACLD SSIAMKSVLN RYKSIILTSG TITPLELYPK LLNFSTVLTA SFPMSFDRNC VCPLIVTKSS DLIPLSSQYS LRNDLNVIKN YGFLLVEMCK NIPDGIISYF PSYIYMEHVM STWYELGIIS NILEYKLIFI ETKDIVSTTI ALHNFKKACD LGKGAVFLSI CRGKIAEGID FDKHYGKCVI LFGIPYQYTL SRILKARLDF LKETYNIQEN EFLTFDAMRQ ASQCVGRIIR NKKDYGIMIF SDIRYTRNDK KGKLPPWIIK CMDVSNTNLT IGAGVNISKK FLLNMSQEYK ETDQTKISQI ILQNPIKCWE IVKSILNMDD FI // ID Q7RXF5_NEUCR Unreviewed; 806 AA. AC Q7RXF5; DT 15-DEC-2003, integrated into UniProtKB/TrEMBL. DT 22-JAN-2014, sequence version 3. DT 11-MAY-2016, entry version 76. DE SubName: Full=DNA repair helicase RAD3 {ECO:0000313|EMBL:EAA27300.3}; GN ORFNames=NCU01625 {ECO:0000313|EMBL:EAA27300.3}; OS Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM OS 1257 / FGSC 987). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; OC Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; OC Neurospora. OX NCBI_TaxID=367110 {ECO:0000313|EMBL:EAA27300.3, ECO:0000313|Proteomes:UP000001805}; RN [1] {ECO:0000313|EMBL:EAA27300.3, ECO:0000313|Proteomes:UP000001805} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987 RC {ECO:0000313|Proteomes:UP000001805}; RX PubMed=12712197; DOI=10.1038/nature01554; RA Galagan J.E., Calvo S.E., Borkovich K.A., Selker E.U., Read N.D., RA Jaffe D., FitzHugh W., Ma L.J., Smirnov S., Purcell S., Rehman B., RA Elkins T., Engels R., Wang S., Nielsen C.B., Butler J., Endrizzi M., RA Qui D., Ianakiev P., Bell-Pedersen D., Nelson M.A., RA Werner-Washburne M., Selitrennikoff C.P., Kinsey J.A., Braun E.L., RA Zelter A., Schulte U., Kothe G.O., Jedd G., Mewes W., Staben C., RA Marcotte E., Greenberg D., Roy A., Foley K., Naylor J., RA Stange-Thomann N., Barrett R., Gnerre S., Kamal M., Kamvysselis M., RA Mauceli E., Bielke C., Rudd S., Frishman D., Krystofova S., RA Rasmussen C., Metzenberg R.L., Perkins D.D., Kroken S., Cogoni C., RA Macino G., Catcheside D., Li W., Pratt R.J., Osmani S.A., RA DeSouza C.P., Glass L., Orbach M.J., Berglund J.A., Voelker R., RA Yarden O., Plamann M., Seiler S., Dunlap J., Radford A., Aramayo R., RA Natvig D.O., Alex L.A., Mannhaupt G., Ebbole D.J., Freitag M., RA Paulsen I., Sachs M.S., Lander E.S., Nusbaum C., Birren B.; RT "The genome sequence of the filamentous fungus Neurospora crassa."; RL Nature 422:859-868(2003). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CM002237; EAA27300.3; -; Genomic_DNA. DR RefSeq; XP_956536.3; XM_951443.3. DR ProteinModelPortal; Q7RXF5; -. DR EnsemblFungi; EFNCRT00000001754; EFNCRP00000001754; EFNCRG00000001752. DR GeneID; 3872684; -. DR KEGG; ncr:NCU01625; -. DR EuPathDB; FungiDB:NCU01625; -. DR HOGENOM; HOG000205390; -. DR InParanoid; Q7RXF5; -. DR KO; K10844; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000001805; Chromosome 6, Linkage Group II. DR GO; GO:0005829; C:cytosol; IEA:EnsemblFungi. DR GO; GO:0000112; C:nucleotide-excision repair factor 3 complex; IEA:EnsemblFungi. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0000717; P:nucleotide-excision repair, DNA duplex unwinding; IEA:EnsemblFungi. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 2. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EAA27300.3}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000001805}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EAA27300.3}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EAA27300.3}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EAA27300.3}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000001805}. FT DOMAIN 7 282 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 742 788 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 806 AA; 92985 MW; B08B9B8AB1F4A445 CRC64; MEFNIDDLPV LFPYPRIYPE QYAYMVDLKK TLDAGGNCVL EMPSGTGKTV TLLSLIVAYQ QYYPEHRKLI YCSRTMSEIE KALVELRALM KFRAERLGHE EEFRGLGLTS RKNLCLHPSV KREKSGAIVD ARCRSLTAGF VKEKREKGEN VETCVYHDNL DLLEPHNLIP NGIWTLDGLM RYGEEKKQCP YFTARRMMQH CNVIIYSYHY LLDPKIAERV SKDLSKDCIV VFDEAHNIDN VCIESLSTDI TQDSLMRATR GAQNLEAKIS EMKDSDQEKL QSEYEKLVEG LKGLDEGRQE DAFMANPTLP DDLLKEAVPG NIRRAEHFVA FLRRFIEYLK TRMKVRQVIS ETPPSFLAHL KEYTFIEKKP LRFCAERLTS LVRTLELTNI EDYRPLQEVA TFATLVATYE KGFLLILEPY ESDTAKTPNP VLHFTCLDAA IAIKPVFDRF SSVIITSGTI SPLEMYPKML NFETVVQESY AMTLARRSFL PMIVTRGSDQ ASISTSFQVR NEPSVVRNYG NLLTEFARIT PDGMVVFFPS YLYMESIISM WQGMGILDEV WKHKLILVET PDAQETSLAL ETYRTACCNG RGAILLCVAR GKVSEGIDFD HQYGRTVLCI GVPFQYTESR ILKARLEFLR ETYRIRENDF LSFDAMRHAA QCLGRVLRGK DDYGVMVLAD RRFMKKRAQL PKWINQAFLE ANTNLSTDMA VGNARAFLKQ MAQPFSAKDQ EGVSIWGMED LKRHQEKMAE DMIVELKTAR EEEERERKRR EEEERRRFEE ERDRVSDYEM DEDDEAEMMA LDARIG // ID Q8I2H7_PLAF7 Unreviewed; 1056 AA. AC Q8I2H7; DT 01-MAR-2003, integrated into UniProtKB/TrEMBL. DT 01-MAR-2003, sequence version 1. DT 11-MAY-2016, entry version 91. DE SubName: Full=DNA excision-repair helicase, putative {ECO:0000313|EMBL:CAD52016.1}; GN ORFNames=PFI1650w {ECO:0000313|EMBL:CAD52016.1}; OS Plasmodium falciparum (isolate 3D7). OC Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; OC Plasmodiidae; Plasmodium; Plasmodium (Laverania). OX NCBI_TaxID=36329 {ECO:0000313|EMBL:CAD52016.1, ECO:0000313|Proteomes:UP000001450}; RN [1] {ECO:0000313|Proteomes:UP000001450} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Isolate 3D7 {ECO:0000313|Proteomes:UP000001450}; RX PubMed=12368864; DOI=10.1038/nature01097; RA Gardner M.J., Hall N., Fung E., White O., Berriman M., Hyman R.W., RA Carlton J.M., Pain A., Nelson K.E., Bowman S., Paulsen I.T., RA James K.D., Eisen J.A., Rutherford K.M., Salzberg S.L., Craig A., RA Kyes S., Chan M.-S., Nene V., Shallom S.J., Suh B., Peterson J., RA Angiuoli S., Pertea M., Allen J., Selengut J., Haft D., Mather M.W., RA Vaidya A.B., Martin D.M.A., Fairlamb A.H., Fraunholz M.J., Roos D.S., RA Ralph S.A., McFadden G.I., Cummings L.M., Subramanian G.M., RA Mungall C., Venter J.C., Carucci D.J., Hoffman S.L., Newbold C., RA Davis R.W., Fraser C.M., Barrell B.G.; RT "Genome sequence of the human malaria parasite Plasmodium RT falciparum."; RL Nature 419:498-511(2002). RN [2] {ECO:0000313|EMBL:CAD52016.1, ECO:0000313|Proteomes:UP000001450} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Isolate 3D7 {ECO:0000313|Proteomes:UP000001450}; RX PubMed=12368867; DOI=10.1038/nature01095; RA Hall N., Pain A., Berriman M., Churcher C.M., Harris B., Harris D., RA Mungall K.L., Bowman S., Atkin R., Baker S., Barron A., Brooks K., RA Buckee C.O., Burrows C., Cherevach I., Chillingworth C., RA Chillingworth T., Christodoulou Z., Clark L., Clark R., Corton C., RA Cronin A., Davies R.M., Davis P., Dear P., Dearden F., Doggett J., RA Feltwell T., Goble A., Goodhead I., Gwilliam R., Hamlin N., Hance Z., RA Harper D., Hauser H., Hornsby T., Holroyd S., Horrocks P., RA Humphray S., Jagels K., James K.D., Johnson D., Kerhornou A., RA Knights A., Konfortov B., Kyes S., Larke N., Lawson D., Lennard N., RA Line A., Maddison M., Mclean J., Mooney P., Moule S., Murphy L., RA Oliver K., Ormond D., Price C., Quail M.A., Rabbinowitsch E., RA Rajandream M.A., Rutter S., Rutherford K.M., Sanders M., Simmonds M., RA Seeger K., Sharp S., Smith R., Squares R., Squares S., Stevens K., RA Taylor K., Tivey A., Unwin L., Whitehead S., Woodward J.R., RA Sulston J.E., Craig A., Newbold C., Barrell B.G.; RT "Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13."; RL Nature 419:527-531(2002). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AL844508; CAD52016.1; -; Genomic_DNA. DR RefSeq; XP_001352206.1; XM_001352170.1. DR ProteinModelPortal; Q8I2H7; -. DR SMR; Q8I2H7; 14-60. DR EnsemblProtists; PFI1650w:mRNA; PFI1650w:pep; PFI1650w. DR GeneDB; PF3D7_0934100.1:pep; -. DR GeneID; 813610; -. DR KEGG; pfa:PFI1650w; -. DR EuPathDB; PlasmoDB:PF3D7_0934100; -. DR HOGENOM; HOG000205390; -. DR InParanoid; Q8I2H7; -. DR KO; K10844; -. DR OMA; IKITRRT; -. DR PhylomeDB; Q8I2H7; -. DR Proteomes; UP000001450; Chromosome 9. DR GO; GO:0005737; C:cytoplasm; IDA:GeneDB. DR GO; GO:0005634; C:nucleus; IDA:GeneDB. DR GO; GO:0043139; F:5'-3' DNA helicase activity; IDA:GeneDB. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0043142; F:single-stranded DNA-dependent ATPase activity; IDA:GeneDB. DR GO; GO:0032508; P:DNA duplex unwinding; IDA:GOC. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR006935; Helicase/UvrB_N. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR Pfam; PF04851; ResIII; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 2. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CAD52016.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000001450}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:CAD52016.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CAD52016.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CAD52016.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000001450}. FT DOMAIN 8 416 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 1056 AA; 122839 MW; 3FCB46FC2432C26E CRC64; MVVFNLDDVE IFFPYDYIYP EQYAYMKYLK KTLDSEGHCV LEMPTGTGKT VAIFSLITSY QYHKKDEGKF IFCTRTVAEM EKSLIELKKV IQYRINVMKQ RKVEKLKNEK DDVNDVIKND DVNDVIKNDD VNDVINNDDE EGANNSLDGS KENVKEYNKH DDHINNLKEF GENSEILAIG ISARRCMCIN DKVLLKHERE KIDEECRKLT ATFIREKKYI NNKIDNEIYH PNVDKISDFI LRNRHHLDIE DYFDIYNSRN SLEEYDNIGL CGYYENYKKE FLYDLIKPGV YTIEDLKVLC KNYKNKENVN VPICPYFCAK KIIEISKVII LNYQYVIDPK VSKALFSWKD MNKNVHLKNK NDIIVFDEAH NIDSVCLEAL SVNIDRNILN KASMNITKLM KKIEQSKMLN EQKLKEECNK ILEKIKLQKC NQSLNVTNNV INIDNMKCIN HMDNINKTRS DGNVGSYLEK ETNKHHNIEG KPGELFVTNE QEKKKRKVES SPVAYFDEDM NLMFSDFFLD ESFGDNEKKK KNHDNNNDIN NDDIKINDDI KNNDDINNDD RNNNDDINNN NNDRNNNNGR NNNNDRNNNN EDEDHLNDLC YSPLLMEDII KNVVIPGNIR KSEHFLNLMR IVVVYLKKYI NIYDITSEGP LSFLYKFEKD TKLDTSFFKY CFDRLKSLLN NLQIVNIEDY SSLNIVCNFC TLLGNYFKGF IIICEPYPEA TGIYDPLIQF ACLDSSIAMK TVINKYKSII LTSGTITPLE LYPKLLNFKT VLTASFPMSF DRNCVCPLIV TKGSDLIPLS SQFSLRNDLS VIKNYGILLV DMCKCIPDGI VAYFPSYIYM EQVISSWYEL GVIANILEYK LIFIETKDIV STTIALHNFK KACDLGKGAV FLSICRGKIA EGIDFDKHYG KCVILFGIPY QYTLSKILKS RLDFLKETYN IQENEFLTFD AMRQASQCVG RIIRNKKDYG IMIFSDIRYA KHDKKNKLPP WIIKCMDISN INLTVTTAVD ISKQFLLNMS QEYRETGQTK ISPLMLKNQV KCWTMVKSIL NMDDFI // ID Q8SRT4_ENCCU Unreviewed; 742 AA. AC Q8SRT4; DT 01-JUN-2002, integrated into UniProtKB/TrEMBL. DT 01-JUN-2002, sequence version 1. DT 11-MAY-2016, entry version 89. DE SubName: Full=DNA REPAIR HELICASE OF THE RAD3/XPD SUBFAMILY {ECO:0000313|EMBL:CAD25380.1}; GN OrderedLocusNames=ECU06_0200 {ECO:0000313|EMBL:CAD25380.1}; OS Encephalitozoon cuniculi (strain GB-M1) (Microsporidian parasite). OC Eukaryota; Fungi; Microsporidia; Unikaryonidae; Encephalitozoon. OX NCBI_TaxID=284813 {ECO:0000313|EMBL:CAD25380.1, ECO:0000313|Proteomes:UP000000819}; RN [1] {ECO:0000313|EMBL:CAD25380.1, ECO:0000313|Proteomes:UP000000819} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=GB-M1 {ECO:0000313|EMBL:CAD25380.1, RC ECO:0000313|Proteomes:UP000000819}; RX PubMed=11719806; DOI=10.1038/35106579; RA Katinka M.D., Duprat S., Cornillot E., Metenier G., Thomarat F., RA Prensier G., Barbe V., Peyretaillade E., Brottier P., Wincker P., RA Delbac F., El Alaoui H., Peyret P., Saurin W., Gouy M., RA Weissenbach J., Vivares C.P.; RT "Genome sequence and gene compaction of the eukaryote parasite RT Encephalitozoon cuniculi."; RL Nature 414:450-453(2001). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AL590446; CAD25380.1; -; Genomic_DNA. DR RefSeq; NP_585776.1; NM_001041398.1. DR ProteinModelPortal; Q8SRT4; -. DR STRING; 284813.NP_585776.1; -. DR EnsemblFungi; CAD25380; CAD25380; CAD25380. DR GeneID; 859199; -. DR KEGG; ecu:ECU06_0200; -. DR EuPathDB; MicrosporidiaDB:ECU06_0200; -. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR HOGENOM; HOG000205390; -. DR InParanoid; Q8SRT4; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG7BKD38; -. DR Proteomes; UP000000819; Chromosome VI. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CAD25380.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000000819}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:CAD25380.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CAD25380.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CAD25380.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000000819}. FT DOMAIN 7 282 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 742 AA; 83985 MW; 3F907C61B2B524BB CRC64; MKIHIDEVLV YFPYSSVYPE QLKYMREVKR SLDNKGHCLI EMPSGTGKTV ALLSMTISYQ LHMKSKNVHF KVVYCSRTVP EVEKALKELD RVVEYIKKHR PIEFLGLGLT GRKNLCINKA ALKSFNVDVA CRRLVNKLAE SKCDFYENLA DFREVPVAVY DFLQLKEMGE KKGICPYYLV RRSIPVCDCI IYPYNYLIDP RICAIVSSEL GPNSVVIFDE AHNIDSHCIE VLSIEIRRNV LEGASRAIGN LENLLKRGKP ASGVDIQYEK VREKLVGPVP ESIPYYYASG EGNYEFLPGN LRNSFHFVSA LKRITEFFKT KLKTTHLTTE STESFCKSIR ELSFVEKKAL RFCSQRLGML SQSLGLDDED MGHLKTVADF STMVSMYSKG FVVIFEPFDS QASTVFNPTL RLACLDSSIA ISPVFARFRN VIITSGTMSP IDMYPKILNF VPSRIAEIGA TLDRNSISPL IITKGNDQMT LRALSDDMET TDACSGDVLT TSFSLRSDPS VVRNYGHLMV ELSKVVPDGI VCFFPSYMYM EEIVSLWAET SIINEISKNK LVFVETPDGR ETELALANYK RACDNGRGGM LFSVARGKVS EGVDFEDGYG RCVVMLGVPF QYTESVRLKK RLDFLREEYG IKEYDFLTFD AMRHAAQCLG RVLRNKNDYG LMILADERFE RNDKKSKLPK WIRNCIDGGN SNLSVDMALS IARRFFREMA QECTGAGNSL LGEKDVEAFV FE // ID Q8U2A6_PYRFU Unreviewed; 631 AA. AC Q8U2A6; DT 01-JUN-2002, integrated into UniProtKB/TrEMBL. DT 01-JUN-2002, sequence version 1. DT 11-MAY-2016, entry version 88. DE SubName: Full=DNA repair helicase rad3, putative {ECO:0000313|EMBL:AAL81057.1}; GN OrderedLocusNames=PF0933 {ECO:0000313|EMBL:AAL81057.1}; OS Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1). OC Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; OC Pyrococcus. OX NCBI_TaxID=186497 {ECO:0000313|EMBL:AAL81057.1, ECO:0000313|Proteomes:UP000001013}; RN [1] {ECO:0000313|EMBL:AAL81057.1, ECO:0000313|Proteomes:UP000001013} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 43587 / DSM 3638 / JCM 8422 / Vc1 RC {ECO:0000313|Proteomes:UP000001013}; RX PubMed=10430560; RA Maeder D.L., Weiss R.B., Dunn D.M., Cherry J.L., Gonzalez J.M., RA DiRuggiero J., Robb F.T.; RT "Divergence of the hyperthermophilic archaea Pyrococcus furiosus and RT P. horikoshii inferred from complete genomic sequences."; RL Genetics 152:1299-1305(1999). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AE009950; AAL81057.1; -; Genomic_DNA. DR ProteinModelPortal; Q8U2A6; -. DR STRING; 186497.PF0933; -. DR PRIDE; Q8U2A6; -. DR EnsemblBacteria; AAL81057; AAL81057; PF0933. DR KEGG; pfu:PF0933; -. DR eggNOG; arCOG00770; Archaea. DR eggNOG; COG1199; LUCA. DR HOGENOM; HOG000223366; -. DR KO; K10844; -. DR OMA; PDWMVET; -. DR Proteomes; UP000001013; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR014001; Helicase_ATP-bd. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00487; DEXDc; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000313|EMBL:AAL81057.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000001013}; KW Helicase {ECO:0000313|EMBL:AAL81057.1}; KW Hydrolase {ECO:0000313|EMBL:AAL81057.1}; KW Nucleotide-binding {ECO:0000313|EMBL:AAL81057.1}; KW Reference proteome {ECO:0000313|Proteomes:UP000001013}. FT DOMAIN 2 278 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 631 AA; 72851 MW; C32089CBAADF19BF CRC64; MEELQYFPYE RLRPNQREFI EIVKEAVKRG ENLIVEAPTG FGKTISVLAG VLPYAISLGY KVVYLARTHK QMDRVIEELK KIRERNEVSG IEFRSRRDLC LHSYIQTFVQ DAYTSMIVCK TLRKLGKCPF FENIKEKRDR VEEIVRFFLN SPPFPHEVLE YSELLELCPY EITKKIGEKA NVIVASYLYM ISPPIRQAFL ENLGVDYSDL IVIFDEAHNL PDQAISALSD RLSIRSIERA IKEAEEYGEK DIENFLSILL RGLEILYKEK LENYESEEVP IRPEEVFLHV ASVLGWSGRE IGMMLEDMIE VGDAIREDRI ERNLPPRSYV GRVGEFLWNW LALREREDYL HLFTKERGLA LELVALDPSV ALEFLEEVHS AIFMSGTLSP LEAFRDIIGV KAELKKFPRM IKRENAIVLV ARDVSTRGIE RSPSLYRRIS EYIFEAVRNT PKNVGVFTAS YEVLEGILST NVHIKIEEEI GKKVFIEKRD APSRENDEMI RAFKEESKGK GAVLFGVMGG RNSEGQDYSG DEMNGVVLVG IPYARPTPRV QAQIRYFEKK FPGKGRYYGY VLPAHRKLTQ AAGRVHRSEE EKGSIVILDY RVLWKSVKKD LPDWMVETMI PVTLPHYENK T // ID Q8YAG9_LISMO Unreviewed; 779 AA. AC Q8YAG9; DT 01-MAR-2002, integrated into UniProtKB/TrEMBL. DT 01-MAR-2002, sequence version 1. DT 11-MAY-2016, entry version 74. DE SubName: Full=Lmo0157 protein {ECO:0000313|EMBL:CAC98372.1}; GN OrderedLocusNames=lmo0157 {ECO:0000313|EMBL:CAC98372.1}; OS Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e). OC Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria. OX NCBI_TaxID=169963 {ECO:0000313|EMBL:CAC98372.1, ECO:0000313|Proteomes:UP000000817}; RN [1] {ECO:0000313|EMBL:CAC98372.1, ECO:0000313|Proteomes:UP000000817} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC BAA-679 / EGD-e {ECO:0000313|Proteomes:UP000000817}; RX PubMed=11679669; DOI=10.1126/science.1063447; RA Glaser P., Frangeul L., Buchrieser C., Rusniok C., Amend A., RA Baquero F., Berche P., Bloecker H., Brandt P., Chakraborty T., RA Charbit A., Chetouani F., Couve E., de Daruvar A., Dehoux P., RA Domann E., Dominguez-Bernal G., Duchaud E., Durant L., Dussurget O., RA Entian K.D., Fsihi H., Portillo F.G., Garrido P., Gautier L., RA Goebel W., Gomez-Lopez N., Hain T., Hauf J., Jackson D., Jones L.M., RA Kaerst U., Kreft J., Kuhn M., Kunst F., Kurapkat G., Madueno E., RA Maitournam A., Vicente J.M., Ng E., Nedjari H., Nordsiek G., RA Novella S., de Pablos B., Perez-Diaz J.C., Purcell R., Remmel B., RA Rose M., Schlueter T., Simoes N., Tierrez A., Vazquez-Boland J.A., RA Voss H., Wehland J., Cossart P.; RT "Comparative genomics of Listeria species."; RL Science 294:849-852(2001). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AL591973; CAC98372.1; -; Genomic_DNA. DR PIR; AF1094; AF1094. DR RefSeq; NP_463690.1; NC_003210.1. DR RefSeq; WP_009930732.1; NC_003210.1. DR STRING; 169963.lmo0157; -. DR PaxDb; Q8YAG9; -. DR EnsemblBacteria; CAC98372; CAC98372; CAC98372. DR GeneID; 986835; -. DR KEGG; lmo:lmo0157; -. DR PATRIC; 20309317; VBILisMon69206_0160. DR eggNOG; ENOG4107QX6; Bacteria. DR eggNOG; COG1199; LUCA. DR HOGENOM; HOG000183657; -. DR OMA; DYNYYFD; -. DR OrthoDB; EOG61P6NQ; -. DR PhylomeDB; Q8YAG9; -. DR BioCyc; LMON169963:LMO0157-MONOMER; -. DR Proteomes; UP000000817; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 4. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR001650; Helicase_C. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 3. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. DR PROSITE; PS51194; HELICASE_CTER; 1. PE 4: Predicted; KW Complete proteome {ECO:0000313|Proteomes:UP000000817}; KW Reference proteome {ECO:0000313|Proteomes:UP000000817}. FT DOMAIN 177 428 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT DOMAIN 586 773 Helicase C-terminal. FT {ECO:0000259|PROSITE:PS51194}. SQ SEQUENCE 779 AA; 89573 MW; A71FB7DFE7B623CC CRC64; MRKVRISVRR LVEFVRRSGS IDNRMTSSDR ALEGTKIHQL LQKEAGEEYA AEVRLNLDRI VDGIAFSLDG RADGIINGRM IDEIKTTETP MDEITENFRP LHWAQLICYG FMLAEKSDLA EVTLQLTYYQ VVDKEVKQFQ RVMSREELSV FVDDLLSQYA IWAKASAAWE MKRNKTIQEL TFPYDSYRSG QRELAIAVYR TISSEESLFC EAPTGIGKTM STLFPGIKAM GEGKTDKLFY FTAKTITRQV AEDALDEMRR KGLAARSVTI TAKDKICFLD ERKCEPDHCQ FARGYYDRLN EALFDMLQSE EAITRQVVES YARKYTLCPF ELSLDVALFC DVIVCDYNYL FDPVVYLKRF FAEGPGKYTF LVDEVHNLVD RARSMYSATL KKSAVMQVKR GLDAKNNKRL LNAINVMNKD MIALNKKLKD LDGTIYVQKN ELIDWNESVL KFTFVAKEWL PQNTQSEIQA DVLELYFESL RYVAIADFYD DRYVTQVTKS HGDLEIKQVC LDPSFLLSER LKLGSSSVLF SATLRPIDYY TNLLGGQEDT SRMIFSSPFK QKNMHLLVAD YISTKYQMRE NSMEAVVDAL YALVSGENGN YLFFFPSFLY LQKVYDLFKE KYPNIRLQKQ ETAMDEERRE HFLERFQAEN VETLIGFCVL GGVFSEGVDL RGNRLVGAAV VGVGLAQLNH ESDLIKDYYN ETIGRGFDYA YQIPGMNKVL QAVGRVIRGE SDRGVVLLIE ERFSADRYRA LFPTHWNHAK TVKSTDDISR EVAGFWRNS // ID Q97IG9_CLOAB Unreviewed; 791 AA. AC Q97IG9; DT 01-OCT-2001, integrated into UniProtKB/TrEMBL. DT 01-OCT-2001, sequence version 1. DT 11-MAY-2016, entry version 83. DE SubName: Full=Rad3-related DNA helicase {ECO:0000313|EMBL:AAK79638.1}; GN OrderedLocusNames=CA_C1672 {ECO:0000313|EMBL:AAK79638.1}; OS Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG OS 5710 / VKM B-1787). OC Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; OC Clostridium. OX NCBI_TaxID=272562 {ECO:0000313|EMBL:AAK79638.1, ECO:0000313|Proteomes:UP000000814}; RN [1] {ECO:0000313|EMBL:AAK79638.1, ECO:0000313|Proteomes:UP000000814} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787 RC {ECO:0000313|Proteomes:UP000000814}; RX PubMed=11466286; DOI=10.1128/JB.183.16.4823-4838.2001; RA Nolling J., Breton G., Omelchenko M.V., Makarova K.S., Zeng Q., RA Gibson R., Lee H.M., Dubois J., Qiu D., Hitti J., Wolf Y.I., RA Tatusov R.L., Sabathe F., Doucette-Stamm L., Soucaille P., Daly M.J., RA Bennett G.N., Koonin E.V., Smith D.R.; RT "Genome sequence and comparative analysis of the solvent-producing RT bacterium Clostridium acetobutylicum."; RL J. Bacteriol. 183:4823-4838(2001). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AE001437; AAK79638.1; -; Genomic_DNA. DR PIR; C97106; C97106. DR RefSeq; NP_348298.1; NC_003030.1. DR RefSeq; WP_010964979.1; NC_003030.1. DR ProteinModelPortal; Q97IG9; -. DR STRING; 272562.CA_C1672; -. DR EnsemblBacteria; AAK79638; AAK79638; CA_C1672. DR GeneID; 1117855; -. DR KEGG; cac:CA_C1672; -. DR PATRIC; 32037724; VBICloAce74127_1875. DR eggNOG; ENOG4107QX6; Bacteria. DR eggNOG; COG1199; LUCA. DR HOGENOM; HOG000183657; -. DR OMA; DYNYYFD; -. DR OrthoDB; EOG61P6NQ; -. DR BioCyc; CACE272562:GJIH-1721-MONOMER; -. DR Proteomes; UP000000814; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 4. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR001650; Helicase_C. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF00270; DEAD; 1. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. DR PROSITE; PS51194; HELICASE_CTER; 1. PE 4: Predicted; KW ATP-binding {ECO:0000313|EMBL:AAK79638.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000000814}; KW Helicase {ECO:0000313|EMBL:AAK79638.1}; KW Hydrolase {ECO:0000313|EMBL:AAK79638.1}; KW Nucleotide-binding {ECO:0000313|EMBL:AAK79638.1}; KW Reference proteome {ECO:0000313|Proteomes:UP000000814}. FT DOMAIN 193 445 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT DOMAIN 598 779 Helicase C-terminal. FT {ECO:0000259|PROSITE:PS51194}. SQ SEQUENCE 791 AA; 92541 MW; 0C59D59A8F504308 CRC64; MESSNNKIKL SVRNLVEFVL RCGDLDNRFS GGSSRAVEGT RAHTKLQKQS KKLAKEKENY IYNSEVFLKY ETELEDVDFI IEGRADEIFI DNYCVTINEI KSTGRPLEFI DENFNIIHWA QVKCYGYIYA EQNNIENLNI SLTYFNIDTE EIKVLTKEVS FEYLKKEFFE YLQKYVYWAK MAIDWQIVRD ISIGQCDFPF KEYRKGQRKL AVYVYKTIKE KKKLFVKAPT GIGKTISTLF PAVKAFKEGE IEKIFYLTAK GTTALSALSA VELLNKKGLR LKTLILTSKE KICFNEETNC NPEECIYAKG HYDRVNDAIK DLLKNEDIYN REIIEEYAKK YNVCPFELSL DMSLWCDLVI CDYNYVFDPS VYLKRFFSDA KGGYVFLVDE AHNLPDRARD MYSSELYKSK VMFLKKNLSK KDYIYKTINN INSFFINLKK LSEDKGYIID EDDNYEEAAK VIYKFLNKCE KWILENKEHK IYKEMQEFYL DAFKFIKTYE LYSDNYIFYG EKISSDFKIK LFCLDPSKFI EETVKKGISA VFFSATLSPM NYFKEILGAE EGDYNATFAS PFSEDNRCIF IAKNISTKYA KREQNYDAVV QYIRSFVLQK KGNYMIFFPS YKYMNNIYDR FSAGEDYEVI LQKSSMDETE KNDFLAAFND ESEKGTIGFC VLGGVFSEGI DLKGERLIGA VIVGVGLPMI CLERDMIKKY FDNRNNLGYE YSYMYPGMNK VLQAAGRVIR SESDKGAIML LDERFAKYSY KKLMPSEWEN AIYSSGNLEI EKKLEIFWAD W // ID Q9N3L2_CAEEL Unreviewed; 606 AA. AC Q9N3L2; DT 01-OCT-2000, integrated into UniProtKB/TrEMBL. DT 01-JUN-2003, sequence version 3. DT 11-MAY-2016, entry version 116. DE SubName: Full=XPD (Xeroderma Pigmentosum complementation group D) related {ECO:0000313|EMBL:CCD73788.1}; GN Name=xpd-1 {ECO:0000313|EMBL:CCD73788.1, GN ECO:0000313|WormBase:Y50D7A.2}; GN ORFNames=CELE_Y50D7A.2 {ECO:0000313|EMBL:CCD73788.1}, GN Y50D7A.2 {ECO:0000313|WormBase:Y50D7A.2}; OS Caenorhabditis elegans. OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; OC Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. OX NCBI_TaxID=6239 {ECO:0000313|EMBL:CCD73788.1, ECO:0000313|Proteomes:UP000001940}; RN [1] {ECO:0000313|EMBL:CCD73788.1, ECO:0000313|Proteomes:UP000001940} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Bristol N2 {ECO:0000313|EMBL:CCD73788.1, RC ECO:0000313|Proteomes:UP000001940}; RX PubMed=9851916; DOI=10.1126/science.282.5396.2012; RG Caenorhabditis elegans Sequencing Consortium; RA Sulson J.E., Waterston R.; RT "Genome sequence of the nematode C. elegans: a platform for RT investigating biology."; RL Science 282:2012-2018(1998). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; BX284603; CCD73788.1; -; Genomic_DNA. DR RefSeq; NP_497182.2; NM_064781.2. DR UniGene; Cel.30456; -. DR ProteinModelPortal; Q9N3L2; -. DR SMR; Q9N3L2; 27-133, 298-529. DR STRING; 6239.Y50D7A.2; -. DR EPD; Q9N3L2; -. DR PaxDb; Q9N3L2; -. DR PRIDE; Q9N3L2; -. DR EnsemblMetazoa; Y50D7A.2; Y50D7A.2; WBGene00021752. DR GeneID; 175190; -. DR KEGG; cel:CELE_Y50D7A.2; -. DR UCSC; Y50D7A.2; c. elegans. DR CTD; 175190; -. DR WormBase; Y50D7A.2; CE33947; WBGene00021752; xpd-1. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR GeneTree; ENSGT00550000075092; -. DR HOGENOM; HOG000205390; -. DR InParanoid; Q9N3L2; -. DR KO; K10844; -. DR OMA; KICPYFL; -. DR OrthoDB; EOG70W3CM; -. DR PhylomeDB; Q9N3L2; -. DR NextBio; 887130; -. DR Proteomes; UP000001940; Chromosome III. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 3. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 1: Evidence at protein level; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000001940}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Proteomics identification {ECO:0000213|EPD:Q9N3L2, KW ECO:0000213|PeptideAtlas:Q9N3L2}; KW Reference proteome {ECO:0000313|Proteomes:UP000001940}. FT DOMAIN 1 134 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 606 AA; 69389 MW; A767228CFD931D14 CRC64; MSNLVVETLK NTKKTPILMK FCPNFQEDLR SLGREKKICP YFTARQAINR AHIVVYSYHY ILDPKIAELV SKDFSRKSVV VFDEAHNIDN VCIESMSVAI SQKNADRALQ ELQSLEGVVN RMKSSNSEKL QSEYDKLVEG LKRTERERAN DERLANPVLP DQILHEAVPG NIRQANHFLL FLKRFVEYIR HRLRTHQVLI ESPAAFMKDI LDRMCIERKP MRFCAERLSN LVKTLEITDN GDVWALSQVT TLCTLVSTYS KGFSVIVEPQ DGSQLAVITL SCHDASIAIR PVMSRFQSVI ITSGTLSPLE MYPKVLDFDP SVIASFTMTL ARPCLSPLVV ARGNDQVAMT SRFEQRADVA VIRNYGNLVL EMASLVPDGM VVFFTSYLYM ENVIGVWYEQ HIIDELMKYK LLFIETNDAL ETSAALEKYV EACDSGRGAV LFSVARGKVS EGIDFSHHLG RCVIMLGIPY MYTESRVLRA RLEYLRDQFG IKENDFLTFD AMRHTAQCMG RALRSKTDYG LMVFADKRFS RNDKRGKLPR WMQEYLEPAC TNLSIDEAAQ VARRWLTLMA QPFEKEHQLG VSLLDKEMVH DSQIMKRFER VVEYVD // ID R0K0R1_SETT2 Unreviewed; 800 AA. AC R0K0R1; DT 26-JUN-2013, integrated into UniProtKB/TrEMBL. DT 26-JUN-2013, sequence version 1. DT 11-MAY-2016, entry version 20. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EOA83274.1}; GN ORFNames=SETTUDRAFT_119923 {ECO:0000313|EMBL:EOA83274.1}; OS Setosphaeria turcica (strain 28A) (Northern leaf blight fungus) OS (Exserohilum turcicum). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; OC Dothideomycetes; Pleosporomycetidae; Pleosporales; Pleosporineae; OC Pleosporaceae; Setosphaeria. OX NCBI_TaxID=671987 {ECO:0000313|EMBL:EOA83274.1, ECO:0000313|Proteomes:UP000016935}; RN [1] {ECO:0000313|EMBL:EOA83274.1, ECO:0000313|Proteomes:UP000016935} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=28A {ECO:0000313|Proteomes:UP000016935}; RX PubMed=23236275; DOI=10.1371/journal.ppat.1003037; RA Ohm R.A., Feau N., Henrissat B., Schoch C.L., Horwitz B.A., RA Barry K.W., Condon B.J., Copeland A.C., Dhillon B., Glaser F., RA Hesse C.N., Kosti I., LaButti K., Lindquist E.A., Lucas S., RA Salamov A.A., Bradshaw R.E., Ciuffetti L., Hamelin R.C., Kema G.H.J., RA Lawrence C., Scott J.A., Spatafora J.W., Turgeon B.G., RA de Wit P.J.G.M., Zhong S., Goodwin S.B., Grigoriev I.V.; RT "Diverse lifestyles and strategies of plant pathogenesis encoded in RT the genomes of eighteen Dothideomycetes fungi."; RL PLoS Pathog. 8:E1003037-E1003037(2012). RN [2] {ECO:0000313|EMBL:EOA83274.1, ECO:0000313|Proteomes:UP000016935} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=28A {ECO:0000313|Proteomes:UP000016935}; RX PubMed=23357949; DOI=10.1371/journal.pgen.1003233; RA Condon B.J., Leng Y., Wu D., Bushley K.E., Ohm R.A., Otillar R., RA Martin J., Schackwitz W., Grimwood J., MohdZainudin N., Xue C., RA Wang R., Manning V.A., Dhillon B., Tu Z.J., Steffenson B.J., RA Salamov A., Sun H., Lowry S., LaButti K., Han J., Copeland A., RA Lindquist E., Barry K., Schmutz J., Baker S.E., Ciuffetti L.M., RA Grigoriev I.V., Zhong S., Turgeon B.G.; RT "Comparative genome structure, secondary metabolite, and effector RT coding capacity across Cochliobolus pathogens."; RL PLoS Genet. 9:E1003233-E1003233(2013). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; KB908833; EOA83274.1; -; Genomic_DNA. DR RefSeq; XP_008029032.1; XM_008030841.1. DR EnsemblFungi; EOA83274; EOA83274; SETTUDRAFT_119923. DR GeneID; 19395798; -. DR Proteomes; UP000016935; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000016935}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000016935}. FT DOMAIN 7 283 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 800 AA; 91074 MW; 094100BAF279707C CRC64; MKFYIDSLPV LFPYPRIYPE QYAYMCDLKR TLDQGGHCVL EMPSGTGKTV SLLSLIVAYQ QHYPEKRKLI YCSRTMSEIE KALAELKALM KYRTSELGYE EEFRGLGLTS RKNLCLHPSV KREKSGTVVD ARCRSLTAGF VKEKKERGED VELCVYHENL DLLEPHNLIP PGVWTFDGMM KYGEQQKQCP YFTARRMMPY CNVIIYSYHY LLDPKIADRV SKELSKDCIV VFDEAHNIDN VCIESLSIDL TEDVLRKATK GVNSLDRKIT EMKSSDAEKL QSEYAKLVEG LRAADEARNE EAFMANPALP DDLLTEAVPG NIRRAEHFVA FLKRFIEYLK TRMKVLNVVA DTPPEFLKHL RDLTFIERKP LRFCAERLTS LVRTLELTNI EDYQPLQEVA TFATLVATYE TGFLLIIEPF ESATATVPNP VLHLTCLDAA IAIKPVFERF YSVIVTSGTM SPLDMYPRML NFNTVVQESF TMTLTRKSFL PMIVDRGNDQ NQVTSQFEHR NDLQVQRNFG NLLIEFCKLT PDGVVVFFPS YLYMESIISA WQGMEILDTV WKYKLILVET PDAQETALAL ETFRTACNNG RGAVLLCVAR GKVSEGIDFD HHYGRTVLCM GVPYQYTESR ILKARLEFLR ETYRIKEADF LSFDAMRHAA QCLGRVIRGK DDYGIMVLAD KRFNKKQTQL PKWIQQGLDA KNTKLSIDQA VGMAKNFLKE MSVPWSRAEQ EGHSSWSLED LEAHQRKKAA HGISGTENPA MRALEGRAEI ERMDVDGEGD EFGGRADVDA EMAGLADAGA // ID R1DJY8_EMIHU Unreviewed; 844 AA. AC R1DJY8; DT 26-JUN-2013, integrated into UniProtKB/TrEMBL. DT 26-JUN-2013, sequence version 1. DT 11-MAY-2016, entry version 25. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EOD35352.1, ECO:0000313|EnsemblProtists:EOD35352}; GN ORFNames=EMIHUDRAFT_63180 {ECO:0000313|EMBL:EOD35352.1}; OS Emiliania huxleyi (Pontosphaera huxleyi). OC Eukaryota; Haptophyceae; Isochrysidales; Noelaerhabdaceae; Emiliania. OX NCBI_TaxID=2903 {ECO:0000313|EMBL:EOD35352.1}; RN [1] {ECO:0000313|EMBL:EOD35352.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=CCMP1516 {ECO:0000313|EMBL:EOD35352.1}; RG DOE Joint Genome Institute; RA Read B., Kegel J., Klute M., Kuo A., Lefebvre S.C., Maumus F., RA Mayer C., Miller J., Allen A., Bidle K., Borodovsky M., Bowler C., RA Brownlee C., Claverie J.-M., Cock M., De Vargas C., Elias M., RA Frickenhaus S., Gladyshev V.N., Gonzalez K., Guda C., Hadaegh A., RA Herman E., Iglesias-Rodriguez D., Jones B., Lawson T., Leese F., RA Lin Y.-C., Lindquist E., Lobanov A., Lucas S., Malik S.-H.B., RA Marsh M.E., Mock T., Monier A., Moreau H., Mueller-Roeber B., RA Napier J., Ogata H., Parker M., Probert I., Quesneville H., Raines C., RA Rensing S., Riano-Pachon D.M., Richier S., Rokitta S., Salamov A., RA Sarno A.F., Schmutz J., Schroeder D., Shiraiwa Y., Soanes D.M., RA Valentin K., Van Der Giezen M., Van Der Peer Y., Vardi A., Verret F., RA Von Dassow P., Wheeler G., Williams B., Wilson W., Wolfe G., RA Wurch L.L., Young J., Dacks J.B., Delwiche C.F., Dyhrman S., RA Glockner G., John U., Richards T., Worden A.Z., Zhang X., RA Grigoriev I.V.; RT "Genome variability drives Emilianias global distribution."; RL Submitted (JUL-2012) to the EMBL/GenBank/DDBJ databases. RN [2] {ECO:0000313|EnsemblProtists:EOD35352, ECO:0000313|Proteomes:UP000013827} RP NUCLEOTIDE SEQUENCE. RX PubMed=23760476; DOI=10.1038/nature12221; RA Read B.A., Kegel J., Klute M.J., Kuo A., Lefebvre S.C., Maumus F., RA Mayer C., Miller J., Monier A., Salamov A., Young J., Aguilar M., RA Claverie J.M., Frickenhaus S., Gonzalez K., Herman E.K., Lin Y.C., RA Napier J., Ogata H., Sarno A.F., Shmutz J., Schroeder D., RA de Vargas C., Verret F., von Dassow P., Valentin K., Van de Peer Y., RA Wheeler G., Dacks J.B., Delwiche C.F., Dyhrman S.T., Glockner G., RA John U., Richards T., Worden A.Z., Zhang X., Grigoriev I.V., RA Allen A.E., Bidle K., Borodovsky M., Bowler C., Brownlee C., RA Cock J.M., Elias M., Gladyshev V.N., Groth M., Guda C., Hadaegh A., RA Iglesias-Rodriguez M.D., Jenkins J., Jones B.M., Lawson T., Leese F., RA Lindquist E., Lobanov A., Lomsadze A., Malik S.B., Marsh M.E., RA Mackinder L., Mock T., Mueller-Roeber B., Pagarete A., Parker M., RA Probert I., Quesneville H., Raines C., Rensing S.A., RA Riano-Pachon D.M., Richier S., Rokitta S., Shiraiwa Y., Soanes D.M., RA van der Giezen M., Wahlund T.M., Williams B., Wilson W., Wolfe G., RA Wurch L.L.; RT "Pan genome of the phytoplankton Emiliania underpins its global RT distribution."; RL Nature 499:209-213(2013). RN [3] {ECO:0000313|EnsemblProtists:EOD35352} RP IDENTIFICATION. RG EnsemblProtists; RL Submitted (JUN-2015) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; KB864246; EOD35352.1; -; Genomic_DNA. DR RefSeq; XP_005787781.1; XM_005787724.1. DR EnsemblProtists; EOD35352; EOD35352; EMIHUDRAFT_63180. DR GeneID; 17280622; -. DR KEGG; ehx:EMIHUDRAFT_63180; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR Proteomes; UP000013827; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 1. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR006935; Helicase/UvrB_N. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR Pfam; PF04851; ResIII; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 5. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000013827}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000013827}. FT DOMAIN 7 289 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 844 AA; 94006 MW; F044C3E22B47E025 CRC64; MRFQVEELEV QFPYPRIYPE QYAYMVELKR SLDARGHSML EMPTGTGKTI TLLSLITSYQ RAHPAMGKLL YCTRTIPEME KVLEELKVLE AHRDELFGQD RKDKLFAVGL TSRRNLRVPP KALSPQPSAL GPALSPRPVG ARPCLDCSSA EQVRELCSYY EALEAQGSDA ALPAAVYTLE ELKELGRGKG WCPYFLARHV ISFANVVVYN YQYLLDPKIS QLVSRSMQRE CVVAHNIDNI CIEVMSINFR MPTLEASPDT SETLPTPFLD SVRSPRGGAP PHRYQRLVHG LANSGALNAS DELAANPLLP QDILLQAVPG NLRRADSFVL FLKRLVAHLK KRLQTEEVEE SSRLALPATP PPAPRRTARL LRASRTSSQS RSTLSLQVTD VSDFNPLLLV GDFATLLATY RQGFCIIIEP YDERSPALPD PLFQFCCNDA SIAMKPVFER FQSVLSGALS LLTNDSLVTT GTLSPIDMYP KILGFEPRAV HSFAMSFSRD IILPLVVTRG ADQAPLSSKF DLRSEPTTVR NYGKLLLDIA ATVPDGVVAF FTSYSYMQQV VREWHALGIL KRVLEHKLVF IETTDVLETT MALENFKRAC DCGRGAVFLS IARGKVAEGV DFDRHYGRAV LLLGVPFQYT LGRVLRARLE FLRDTCAIDE ADFLTFDAIR QAAQCAGRVI RGKTDYGIVV FADKRYNRAD KRDKLPGWIR QFITDGSLDP LLRPRLRSLN LSSDLAMHRA RQFLRKMAQP ATTARSVPSP RPRETWGGPD APRAITCAQA ETVSLDFEQL RRSNAYVASA ATATAAITSH PLQATGQQLP DQPADQPERF AVEMDEAEAM EIAV // ID R1E9M2_BOTPV Unreviewed; 788 AA. AC R1E9M2; DT 26-JUN-2013, integrated into UniProtKB/TrEMBL. DT 26-JUN-2013, sequence version 1. DT 11-MAY-2016, entry version 22. DE SubName: Full=Putative tfiih complex helicase protein {ECO:0000313|EMBL:EOD44473.1}; GN ORFNames=UCRNP2_8816 {ECO:0000313|EMBL:EOD44473.1}; OS Botryosphaeria parva (strain UCR-NP2) (Grapevine canker fungus) OS (Neofusicoccum parvum). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; OC Dothideomycetes; Dothideomycetes incertae sedis; Botryosphaeriales; OC Botryosphaeriaceae; Neofusicoccum. OX NCBI_TaxID=1287680 {ECO:0000313|EMBL:EOD44473.1, ECO:0000313|Proteomes:UP000013521}; RN [1] {ECO:0000313|Proteomes:UP000013521} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=UCR-NP2 {ECO:0000313|Proteomes:UP000013521}; RX PubMed=23766404; DOI=10.1128/genomeA.00339-13; RA Blanco-Ulate B., Rolshausen P., Cantu D.; RT "Draft genome sequence of Neofusicoccum parvum isolate UCR-NP2, a RT fungal vascular pathogen associated with grapevine cankers."; RL Genome Announc. 1:E0033913-E0033913(2013). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; KB916723; EOD44473.1; -; Genomic_DNA. DR RefSeq; XP_007588054.1; XM_007587992.1. DR EnsemblFungi; EOD44473; EOD44473; UCRNP2_8816. DR GeneID; 19028546; -. DR KEGG; npa:UCRNP2_8816; -. DR KO; K10844; -. DR Proteomes; UP000013521; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EOD44473.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000013521}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EOD44473.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EOD44473.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EOD44473.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000013521}. FT DOMAIN 7 284 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 248 275 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 788 AA; 90363 MW; 7A5C91BE5B43E24C CRC64; MKFNIDDLPV LFPYPRIYPE QYKYMCDLKR TLDAGGNCIL EMPSGTGKTV SLLSLIIAYQ QHRPEKRKLI YCSRTMSEIE KALHELKALM KYRTEQLGYE EDFRGLGLTS RKNLCLHPSV KREKNGSVVD ARCRSLTAGF VKEKKERGED VDLCIYHDNL DLLEPHNLIP PGVFTFEDIL RYGEEHKQCP YFTARRMMPF CNVIIYSYHY LLDPKIAERV SKELSKDCIV VFDEAHNIDN VCIESLSIDL TEDSLRKATR GANNLERKIT EMKATDAEKL SNEYKKLVEG LREADQARDE DAFMSNPALP DDLLKEAVPG NIRRAEHFVS FLKRFIEYLK TRMKVLHVVA ETPPSFLVHL KELTFIERKP LRFCAERLTS LVRTLELTNI EDYQPLQEVA TFATLVATYD TGFLLILEPY EAEGATVPNP IFHFTCLDAS IAIKPVFERF SSVIITSGTI SPLDMYPKML NFQTVVQESY TMTLARKSFL PMIVTRGSDQ AAISSSFGVR NDPNVVKNYG VLLREFCKLT PDGIVVFFPS YLYMESVISQ WQGMGILDDV WRYKLILVET PDAQETSLAL ETYRTACNNG RGAVLLCVAR GKVSEGIDFD HHYGRTVLNI GVPFQYTESR ILKARLEFLR EEYHIRENDF LSFDAMRHAA QCLGRVLRGK DDYGIMVLAD KRFRNKRNQL PKWIAQHLSD ADSNMSVDQA AAMARKFLRD MSKTSGHQLA EGISVWGPED LRKYQKQQQE EEIKMLMDAP DREVRMRDAA DEFDEGGDMD EVMAGIEN // ID R2S3T5_9ENTE Unreviewed; 783 AA. AC R2S3T5; DT 26-JUN-2013, integrated into UniProtKB/TrEMBL. DT 26-JUN-2013, sequence version 1. DT 11-MAY-2016, entry version 18. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EOH90185.1}; GN ORFNames=UAU_04014 {ECO:0000313|EMBL:EOH90185.1}; OS Enterococcus pallens ATCC BAA-351. OC Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; OC Enterococcus. OX NCBI_TaxID=1158607 {ECO:0000313|EMBL:EOH90185.1, ECO:0000313|Proteomes:UP000013782}; RN [1] {ECO:0000313|EMBL:EOH90185.1, ECO:0000313|Proteomes:UP000013782} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC BAA-351 {ECO:0000313|EMBL:EOH90185.1, RC ECO:0000313|Proteomes:UP000013782}; RG The Broad Institute Genome Sequencing Platform; RG The Broad Institute Genome Sequencing Center for Infectious Disease; RA Earl A.M., Gilmore M.S., Lebreton F., Walker B., Young S.K., Zeng Q., RA Gargeya S., Fitzgerald M., Haas B., Abouelleil A., Alvarado L., RA Arachchi H.M., Berlin A.M., Chapman S.B., Dewar J., Goldberg J., RA Griggs A., Gujja S., Hansen M., Howarth C., Imamovic A., Larimer J., RA McCowan C., Murphy C., Neiman D., Pearson M., Priest M., Roberts A., RA Saif S., Shea T., Sisk P., Sykes S., Wortman J., Nusbaum C., RA Birren B.; RT "The Genome Sequence of Enterococcus pallens BAA-351."; RL Submitted (FEB-2013) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:EOH90185.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AJAQ01000036; EOH90185.1; -; Genomic_DNA. DR RefSeq; WP_010758959.1; NZ_KB946311.1. DR EnsemblBacteria; EOH90185; EOH90185; UAU_04014. DR Proteomes; UP000013782; Unassembled WGS sequence. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR001650; Helicase_C. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. DR PROSITE; PS51194; HELICASE_CTER; 1. PE 4: Predicted; KW Complete proteome {ECO:0000313|Proteomes:UP000013782}; KW Reference proteome {ECO:0000313|Proteomes:UP000013782}. FT DOMAIN 180 442 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT DOMAIN 587 774 Helicase C-terminal. FT {ECO:0000259|PROSITE:PS51194}. SQ SEQUENCE 783 AA; 90625 MW; FB626BFC833333F1 CRC64; MSIKKIAVRS LVELILRSGS IDEGKNSNHT AQEGARIHRK LQKAAGEDYQ KEVWLKKQLS IAGIDVQIEG RADGIYIEDD LTIIDEIKTS ETPFEELEEG IVNLYFYQAM VYAYIYAEQE ELERIGTRLT YFQTVEEQIT ARVRTFTFEE LRTFFNNLVQ KYEDWLVFQT EWRETRNQSL QAMSFPFPKY RAGQRELAGA VYKTIAAQQK LFVEAPTGIG KTMSTLFPAF KGMGEELGER IFYLTAKTIT RQVAEETVGK LAKQEARVKS VTLTAKDKIC FLTERNCTPE HCPFAKGYYD RVNDGLWDML HQEDQYTRPV IEEYARKHEL CPFELSLDVS RFSDLVIGDY NYLFDPTVYL RRFFEEEDKN NLVLVDEAHN LVSRSKDMYS AEISRQRIHD VGQQLNKKQK KLRNAFNRVD NEFELINQVL EEKKVSYFHQ PAAAEGLLNR LFQLQELMKE WLAENAEDPL QEKLLTVYFD IVRYTRMGEL YDDHYETTIE AKNYDLIVKE YCIDPSWFLQ QTMAKVGSTT LFSASFSPLD YYKDVLGGEE DSLTYRLPSP FPPENQLVIV DAHVQTTYRM REQSLPQIVE AIHALIKTKT GNYMVFFPSF KYLDDVADEF REAYPEYRIS IQGSKLDEAE REAFLANFQA SPSETMVAFC VLGGIFSEGI DLVGERLSGA IIVGVGLPQV NHEQELIKEY YDEKKNAGFS YAYQLPGMNK VIQAAGRVIR TMTDRGIVLL LDQRYTNPHY SQLLPPNWQD RKIVRSTQAI TQLAEAFWEN GCK // ID R2T3I8_9ENTE Unreviewed; 785 AA. AC R2T3I8; DT 26-JUN-2013, integrated into UniProtKB/TrEMBL. DT 26-JUN-2013, sequence version 1. DT 11-MAY-2016, entry version 20. DE SubName: Full=Helicase {ECO:0000313|EMBL:EOH99566.1}; GN ORFNames=UAW_00718 {ECO:0000313|EMBL:EOH99566.1}; OS Enterococcus haemoperoxidus ATCC BAA-382. OC Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; OC Enterococcus. OX NCBI_TaxID=1158608 {ECO:0000313|EMBL:EOH99566.1, ECO:0000313|Proteomes:UP000013858}; RN [1] {ECO:0000313|EMBL:EOH99566.1, ECO:0000313|Proteomes:UP000013858} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC BAA-382 {ECO:0000313|EMBL:EOH99566.1, RC ECO:0000313|Proteomes:UP000013858}; RG The Broad Institute Genome Sequencing Platform; RG The Broad Institute Genome Sequencing Center for Infectious Disease; RA Earl A.M., Gilmore M.S., Lebreton F., Walker B., Young S.K., Zeng Q., RA Gargeya S., Fitzgerald M., Haas B., Abouelleil A., Alvarado L., RA Arachchi H.M., Berlin A.M., Chapman S.B., Dewar J., Goldberg J., RA Griggs A., Gujja S., Hansen M., Howarth C., Imamovic A., Larimer J., RA McCowan C., Murphy C., Neiman D., Pearson M., Priest M., Roberts A., RA Saif S., Shea T., Sisk P., Sykes S., Wortman J., Nusbaum C., RA Birren B.; RT "The Genome Sequence of Enterococcus haemoperoxidus BAA-382."; RL Submitted (FEB-2013) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:EOH99566.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AJAR01000010; EOH99566.1; -; Genomic_DNA. DR RefSeq; WP_010760928.1; NZ_KE136479.1. DR EnsemblBacteria; EOH99566; EOH99566; UAW_00718. DR Proteomes; UP000013858; Unassembled WGS sequence. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 4. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR001650; Helicase_C. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF00270; DEAD; 1. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. DR PROSITE; PS51194; HELICASE_CTER; 1. PE 4: Predicted; KW ATP-binding {ECO:0000313|EMBL:EOH99566.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000013858}; KW Helicase {ECO:0000313|EMBL:EOH99566.1}; KW Hydrolase {ECO:0000313|EMBL:EOH99566.1}; KW Nucleotide-binding {ECO:0000313|EMBL:EOH99566.1}; KW Reference proteome {ECO:0000313|Proteomes:UP000013858}. FT DOMAIN 182 434 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT DOMAIN 592 778 Helicase C-terminal. FT {ECO:0000259|PROSITE:PS51194}. SQ SEQUENCE 785 AA; 91745 MW; 39DD6A0D8E8FFA8A CRC64; MQNTPRIAVR RLVEFILRRG SIDARHSSEH TALEGAKIHR KLQKTAGENY QKEIKLAINI ELNKQTYIIE GRADGIFIDE KKRTVIDEIK TSEPAFSELL EEQIDMFWYQ VMCYGHIYCQ QEELDEITLQ LTYYQTTTEE ITRQEKEFTK EELKEFFDEL TQKYEQWLIF KANWRKIRNQ SLQKLPFPYG DYRAGQRELA VAVYKTILSD QKLFVEAPTG TGKTISTLFP TLKAIGEEQA ERAFYLTAKT ITRQVAEDAV EAMKQKDMQL KSVTLTAKDK ICFLTERNCT PEACPFANGY YDRLNEGLWD LLNNENQFTR EIIEHYARKH TLCPFELSLD VSLWCDLVIC DYNYLFDPVV YLRRFFEEQS EVKENIFLVD EVHNLVNRSR EMYSAVLSKS KILALKQVLD KKQTKLIRAL NKIEKEFERI KQVCDEEGKE FLHQNAPIDS LVKVAYSLAE KIKEWLPENQ DHPELNHVLS VYFEVLNYTK ISEGYDDHYC TYVNCQNYDI IVKQFCIDPN YLLQQKLNKG KASVLFSASL TPLDYYQEIL GGGEESLRYR IPSPFPKENQ LLVIEKYIQT TYKERVNSYE KIIESLTNMI QAKKGNYFVF FPSYSYMDII YEMFREKNPH VKSKIQASMM NEAEREAFLA DFVVEPTETL VGFCVLGGIF SEGIDLKGSR LIGTAIVGVG LPQINHEQEL IKGYYDLEKN QGFQFAYQIP GMNKVLQAAG RVIRDTEDKG IVLLLDQRFS TAAVQRFFPP HWNQVQTSYS HEQTKQLIQE FWQLD // ID R3WPS7_9ENTE Unreviewed; 785 AA. AC R3WPS7; DT 26-JUN-2013, integrated into UniProtKB/TrEMBL. DT 26-JUN-2013, sequence version 1. DT 11-MAY-2016, entry version 20. DE SubName: Full=Helicase {ECO:0000313|EMBL:EOL43835.1}; GN ORFNames=UC3_01816 {ECO:0000313|EMBL:EOL43835.1}; OS Enterococcus phoeniculicola ATCC BAA-412. OC Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; OC Enterococcus. OX NCBI_TaxID=1158610 {ECO:0000313|EMBL:EOL43835.1, ECO:0000313|Proteomes:UP000013785}; RN [1] {ECO:0000313|EMBL:EOL43835.1, ECO:0000313|Proteomes:UP000013785} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC BAA-412 {ECO:0000313|EMBL:EOL43835.1, RC ECO:0000313|Proteomes:UP000013785}; RG The Broad Institute Genome Sequencing Platform; RG The Broad Institute Genome Sequencing Center for Infectious Disease; RA Earl A.M., Gilmore M.S., Lebreton F., Walker B., Young S.K., Zeng Q., RA Gargeya S., Fitzgerald M., Haas B., Abouelleil A., Alvarado L., RA Arachchi H.M., Berlin A.M., Chapman S.B., Dewar J., Goldberg J., RA Griggs A., Gujja S., Hansen M., Howarth C., Imamovic A., Larimer J., RA McCowan C., Murphy C., Neiman D., Pearson M., Priest M., Roberts A., RA Saif S., Shea T., Sisk P., Sykes S., Wortman J., Nusbaum C., RA Birren B.; RT "The Genome Sequence of Enterococcus phoeniculicola BAA-412."; RL Submitted (FEB-2013) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:EOL43835.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AJAT01000015; EOL43835.1; -; Genomic_DNA. DR EnsemblBacteria; EOL43835; EOL43835; UC3_01816. DR Proteomes; UP000013785; Unassembled WGS sequence. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 4. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR001650; Helicase_C. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. DR PROSITE; PS51194; HELICASE_CTER; 1. PE 4: Predicted; KW ATP-binding {ECO:0000313|EMBL:EOL43835.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000013785}; KW Helicase {ECO:0000313|EMBL:EOL43835.1}; KW Hydrolase {ECO:0000313|EMBL:EOL43835.1}; KW Nucleotide-binding {ECO:0000313|EMBL:EOL43835.1}; KW Reference proteome {ECO:0000313|Proteomes:UP000013785}. FT DOMAIN 180 433 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT DOMAIN 587 778 Helicase C-terminal. FT {ECO:0000259|PROSITE:PS51194}. SQ SEQUENCE 785 AA; 91411 MW; 453F962985D72FEE CRC64; MKQTKISVRQ LVEFILKKGS IDTGKNSTHT ALEGARIHRK LQKEVGDTYQ KEVFLKTEVI FDDIVLKIEG RADGIFKKEN HWYIDEIKTS EPKFEELDED QVDLFFFQAM VYGYIYVSQN ELEEITIQLT YYQTIEEVIT RTTRHFTAKD LENFFNQLVT EYREWVIFQE NWRTVRNASL MALKFPYEEY RRGQRELAVA AYKTIRTKQK LFVEAPTGTG KTISTLFPTL KAIGEQEGER VFYLTAKTIT RQVAEDAMVA LSGVGAEAKS VTLTAKDKIC FLTERNCTPE HCIYANGYYN RLNEGLWDLL NHENQMTREV IEEYAKKHTL CPFELSLDVS LWCDVIIGDY NYLFDPTVYL RRFFEEDTNE ENIFLIDEAH NLVNRSREMY SAVITKNKCM ELIRELGTEY QTLQRALKKV SKEFLAIEKI SEEDNWVYHH QKQPAESLTN QLYKLSEKMK EWLAEFPEAS MQPAVLAYYF DVLSFLKMSE YYDDHYETTI ERKLGDLIVR QCCIDPSDFL ESSLDKGKAS LLFSASFSPL SYYQEVLGGK DSLAYRLPSP FPIENQQIIL ANYIETTYQK RQDSESAVIQ AIGDLVQAKK GNYLIFFPSY QYLDDIAEGF KQVYPEIQMV IQDTKMNEEE RELFLSKFEK DPKKTLVGFC VLGGIFSEGI DLKGTRLIGT AIVGVGLPQM NHEQELIKNY YDESDKNGFA FAYQLPGMNK VLQAAGRVIR DATDQGIVLL LDRRFKTSRY QVLFPPHWRQ YETAFTPAQL KEKIESFWKR VDNQI // ID R4K2D3_CLOPA Unreviewed; 784 AA. AC R4K2D3; DT 24-JUL-2013, integrated into UniProtKB/TrEMBL. DT 24-JUL-2013, sequence version 1. DT 11-MAY-2016, entry version 17. DE SubName: Full=DNA helicase, Rad3 {ECO:0000313|EMBL:AGK97262.1}; GN ORFNames=Clopa_2399 {ECO:0000313|EMBL:AGK97262.1}; OS Clostridium pasteurianum BC1. OC Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; OC Clostridium. OX NCBI_TaxID=86416 {ECO:0000313|EMBL:AGK97262.1, ECO:0000313|Proteomes:UP000013523}; RN [1] {ECO:0000313|EMBL:AGK97262.1, ECO:0000313|Proteomes:UP000013523} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=BC1 {ECO:0000313|EMBL:AGK97262.1, RC ECO:0000313|Proteomes:UP000013523}; RG US DOE Joint Genome Institute; RA Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., RA Peters L., Mikhailova N., Teshima H., Detter J.C., Han C., Tapia R., RA Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Dunn J., RA Taghavi S., Francis A., van der Lelie D., Woyke T.; RT "Complete sequence of chromosome of Clostridium pasteurianum BC1."; RL Submitted (JAN-2012) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP003261; AGK97262.1; -; Genomic_DNA. DR RefSeq; WP_015615566.1; NC_021182.1. DR EnsemblBacteria; AGK97262; AGK97262; Clopa_2399. DR KEGG; cpas:Clopa_2399; -. DR Proteomes; UP000013523; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 4. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR001650; Helicase_C. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. DR PROSITE; PS51194; HELICASE_CTER; 1. PE 4: Predicted; KW ATP-binding {ECO:0000313|EMBL:AGK97262.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000013523}; KW Helicase {ECO:0000313|EMBL:AGK97262.1}; KW Hydrolase {ECO:0000313|EMBL:AGK97262.1}; KW Nucleotide-binding {ECO:0000313|EMBL:AGK97262.1}; KW Reference proteome {ECO:0000313|Proteomes:UP000013523}. FT DOMAIN 183 435 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT DOMAIN 589 784 Helicase C-terminal. FT {ECO:0000259|PROSITE:PS51194}. SQ SEQUENCE 784 AA; 91529 MW; DB9DA6BEEB2E6002 CRC64; MDNITKIRIS VRDLIEFILR SGDLVSTFAG NNRNIEAIKV HQKIQKNSGD NYNREVAISH TIIKDDISLE INGRIDGIIT KDKVTIIDEI KTTTNDLNNI TEDYNRLHWA QVKCYAYFYC VQNDIKIIDT RLTYYQMNSR EIKYLIKSYT LVQLEQFFNE IIDKYIYWAK LQKNWREKRD LSIKKLIFPY REYRLGQRKL AVAIYTSIKE NKNIFVKAPT GIGKTISTIF PGIKALGEGI ISKIFYVTAK NTTGEEVKKA FLLLAENDLD FKTVWITAKD KICFKEETNC DPELCKYAKG HFDRINEAIT DALNRNIITR EVIEKYAEKH SVCPFEFSLD LTNWCDCVVC DYNYVFDPKV YLRRFFLEKG GDYCLLVDEA HNLVDRARNM YSGELYKKDI LDLKNKCKNI SSILYKSLNK INTFLVKERK KCEENNIGVN VQKDPPKDII KLLNNFIYEA ERFLIVNDKC EFKAEILDIY FKLNSFVRIY EDYSEEYITY SQKIKDDLLL KMFCVDTSEV MKKCLEKVKS TVFFSATLTP MNYFIKLLGG DNDSYKIRLP SPFKRENLCL LLNDGVSTKY NNRQFTYKEI VSIITNCVSQ KAGNYFVFFP SYNYMKSVLD IFHEENKNIN VVCQKNNMTE EERNNFIALF SENNRETLLG FVVMGGVFSE GIDLIGEKLS GAIIIGVGLP KISLERNLIK EYFIKNNENG FLYSYVYPGI NKVLQSAGRV VRTDKDRGIV VLIDERYSES IYKGLLPEEW SHMKKINTFL NKNNNVILEF WSKK // ID R4XGF3_TAPDE Unreviewed; 800 AA. AC R4XGF3; DT 24-JUL-2013, integrated into UniProtKB/TrEMBL. DT 24-JUL-2013, sequence version 1. DT 11-MAY-2016, entry version 18. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CCG84977.1}; GN ORFNames=TAPDE_005553 {ECO:0000313|EMBL:CCG84977.1}; OS Taphrina deformans (strain PYCC 5710 / ATCC 11124 / CBS 356.35 / IMI OS 108563 / JCM 9778 / NBRC 8474) (Peach leaf curl fungus) (Lalaria OS deformans). OC Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; OC Taphrinomycetes; Taphrinales; Taphrinaceae; Taphrina. OX NCBI_TaxID=1097556 {ECO:0000313|EMBL:CCG84977.1, ECO:0000313|Proteomes:UP000013776}; RN [1] {ECO:0000313|EMBL:CCG84977.1, ECO:0000313|Proteomes:UP000013776} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=PYCC 5710 / ATCC 11124 / CBS 356.35 / IMI 108563 / JCM 9778 / RC NBRC 8474 {ECO:0000313|Proteomes:UP000013776}; RX PubMed=23631913; DOI=10.1128/mBio.00055-13; RA Cisse O.H., Almeida J.M.G.C.F., Fonseca A., Kumar A.A., Salojaervi J., RA Overmyer K., Hauser P.M., Pagni M.; RT "Genome sequencing of the plant pathogen Taphrina deformans, the RT causal agent of peach leaf curl."; RL MBio 4:E0005513-E0005513(2013). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:CCG84977.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CAHR02000367; CCG84977.1; -; Genomic_DNA. DR Proteomes; UP000013776; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000013776}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000013776}. FT DOMAIN 7 299 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 800 AA; 91734 MW; 69159E48A466353A CRC64; MKFEIDGLPI LWPYDRIYPE QLQYITDLKR TLDAGGHCVL EMPSGTGKTV SLLSLIVAYQ QHYPEHRKLI YCSRTMSEIE KALLELKALM KYRSQELGYE EDFRGLGLTS RKNLCLHPSV KREKKGNVVD ARCRSLTAGF VKEKQRAGED VELCIYHENL DLLEPHNLIP NGVYSFEDIL KYGEDNKTCP YFTARRMMPL CNIIIYSYHY LLDPKIADRV SKELSKDCIV VFDEAHNIDN VCIESLSIDI TDDSLRRAAR GVNNLDAKIT EYNNLDSILP LTNIARMKST DAEKLQNEYQ NLVRGLREAD TAREEDAFMS NPALPDDLLQ EAIPGNIRRA EHFVAFLRRF VEYLKTRMKV LHVIAETPTS FLQHLKELTF IEKKPLKFCA ERLASLVRTL ELTNIEDFQP LQEIASFATL VATYEKGFLL ILEPFESDAA TVPNPIFHFT CLDASIAIKP VFDRFSSVVI TSGTLSPLDM YPKMLQFNTV VQESYSMTLA RNCFLPMVIT RGGDQVAISS KFEVRNDPSV VRNYGNILIE FSRITPDGVV AFFPSYLYME SIIAMWQNMG ILDEVWKYKL ILVETPDAQE TSLALETYRT ACENGRGAIF LCVARGKVSE GIDFDHHYGR TVLMFGIPYQ YTESRILKAR LEFLRDNYQI RENDFLTFDA MRHAAQCLGR VLRGKDDYGI MVLADKRFGR ADKRSKLPKW IQQYVTEANS NLSTDMSVVA AKKFLRNMAQ PFGEKDQEGI SWWNKDQVRQ HQLKHESNLT LKKSADVGAV EQDFDMPDEE FLDGIEGMDF // ID R5QR99_9FIRM Unreviewed; 808 AA. AC R5QR99; DT 24-JUL-2013, integrated into UniProtKB/TrEMBL. DT 24-JUL-2013, sequence version 1. DT 11-MAY-2016, entry version 14. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CCZ28899.1}; GN ORFNames=BN526_01322 {ECO:0000313|EMBL:CCZ28899.1}; OS Firmicutes bacterium CAG:194. OC Bacteria; Firmicutes; environmental samples. OX NCBI_TaxID=1263008 {ECO:0000313|EMBL:CCZ28899.1, ECO:0000313|Proteomes:UP000018384}; RN [1] {ECO:0000313|EMBL:CCZ28899.1, ECO:0000313|Proteomes:UP000018384} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=MGS:194 {ECO:0000313|Proteomes:UP000018384}; RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., RA Sunagawa S., Plichta D., Gautier L., Le Chatelier E., Peletier E., RA Bonde I., Nielsen T., Manichanh C., Arumugam M., Batto J., RA Santos M.B.Q.D., Blom N., Borruel N., Burgdorf K.S., Boumezbeur F., RA Casellas F., Dore J., Guarner F., Hansen T., Hildebrand F., Kaas R.S., RA Kennedy S., Kristiansen K., Kultima J.R., Leonard P., Levenez F., RA Lund O., Moumen B., Le Paslier D., Pons N., Pedersen O., Prifti E., RA Qin J., Raes J., Tap J., Tims S., Ussery D.W., Yamada T., RA MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P., Wang J., RA Brunak S., Ehrlich S.D.; RT "Dependencies among metagenomic species, viruses, plasmids and units RT of genetic variation."; RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:CCZ28899.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CAZT010000072; CCZ28899.1; -; Genomic_DNA. DR Proteomes; UP000018384; Unassembled WGS sequence. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 3. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW Complete proteome {ECO:0000313|Proteomes:UP000018384}; KW Reference proteome {ECO:0000313|Proteomes:UP000018384}. FT DOMAIN 179 435 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 808 AA; 94373 MW; FD3A851F6867AD6D CRC64; MDIQISVRNL VEFIFREGDI DNRHAASPDA MQDGSRIHRM IQKRMGLEYE AEVPLRYIVP YENYQIQIEG RADGVIHREN GQVIVDEIKG TYQELKHIRE PKKVHLMQAL CYAFIVAEKE DLRKIGVRMT YCNMETEEIK YFHETYTRVE VRNWFWNLMD QYKKWADFTY EWHQKRQESI HALAFPFDYR TGQKELVGHV YQTICHKKKL FIQAPTGVGK TISTIFPAVK AVGEEKADRI FYLTAKTITR TVAKETFSIL AENGLCYKTV LLTAKEKICP MEACSCNPVD CPYAKGHFSR INDAIYALLQ ERDCFDRDTV LEYAERFMVC PFEMSLDMSL FSDAVICDYN YLFDPYVHLK RFFAEGIKGP YLFLVDEAHN LVERGREMYS AQLVKEDFLT LKKTVKEYKT GLDKYIDRCN KELLALKKEQ CDMVVESAGS FTMQLSRLHS AIGTYLEDHE DSPVREEILQ FYFEAGRFLD VSERLDDHYR IYTRLREDGS FLIREYCIDP SSRLQECMDE GVASILFSAT FLPIQYYKQL LGGTKEDFEV YASSAFHKEQ MQLLLASDVT SRYTRRCELE YYHIASYISD IVAQRNGNYM IFFPSHQFLE QVYNCYMDRF YIEETQECIT QQEYMNEAAR EQFLKRFAIA EPHPDTDDRS RAASWESLVH MEIEQEDKSL LGFCVLGGIF SEGIDLKGES LIGAIIVGTG LPQVCFEREL LKDYFNAEGK NGFDFAYRYP GMNKVQQAAG RVIRSETDRG IVALLDDRFL QTGYQKLFPR EWQSYRCVTG ATCAEAVDNF WKYTKDDK // ID R5TS45_9FIRM Unreviewed; 783 AA. AC R5TS45; DT 24-JUL-2013, integrated into UniProtKB/TrEMBL. DT 24-JUL-2013, sequence version 1. DT 11-MAY-2016, entry version 17. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CCZ68578.1}; GN ORFNames=BN481_01371 {ECO:0000313|EMBL:CCZ68578.1}; OS Ruminococcus gnavus CAG:126. OC Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; OC Ruminococcus; environmental samples. OX NCBI_TaxID=1263106 {ECO:0000313|EMBL:CCZ68578.1, ECO:0000313|Proteomes:UP000018114}; RN [1] {ECO:0000313|EMBL:CCZ68578.1, ECO:0000313|Proteomes:UP000018114} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=MGS:126 {ECO:0000313|Proteomes:UP000018114}; RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., RA Sunagawa S., Plichta D., Gautier L., Le Chatelier E., Peletier E., RA Bonde I., Nielsen T., Manichanh C., Arumugam M., Batto J., RA Santos M.B.Q.D., Blom N., Borruel N., Burgdorf K.S., Boumezbeur F., RA Casellas F., Dore J., Guarner F., Hansen T., Hildebrand F., Kaas R.S., RA Kennedy S., Kristiansen K., Kultima J.R., Leonard P., Levenez F., RA Lund O., Moumen B., Le Paslier D., Pons N., Pedersen O., Prifti E., RA Qin J., Raes J., Tap J., Tims S., Ussery D.W., Yamada T., RA MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P., Wang J., RA Brunak S., Ehrlich S.D.; RT "Dependencies among metagenomic species, viruses, plasmids and units RT of genetic variation."; RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:CCZ68578.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CBAL010000148; CCZ68578.1; -; Genomic_DNA. DR Proteomes; UP000018114; Unassembled WGS sequence. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 5. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR001650; Helicase_C. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF00270; DEAD; 1. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. DR PROSITE; PS51194; HELICASE_CTER; 1. PE 4: Predicted; KW Complete proteome {ECO:0000313|Proteomes:UP000018114}; KW Reference proteome {ECO:0000313|Proteomes:UP000018114}. FT DOMAIN 184 443 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT DOMAIN 589 777 Helicase C-terminal. FT {ECO:0000259|PROSITE:PS51194}. SQ SEQUENCE 783 AA; 91125 MW; F2F5FA92DB214CBE CRC64; MKEETIIRIS VRSLVEFILR EGDIDNRVSG SMEKDAMLLG GKIHRKIQSR MGTNYTAEVP LKIQMPCDGF VLQIEGRADG VLKDDGKVLI DEIKGILRSL EHLEAPVPVH LAQAKCYAYI YAVQNSLKCI DVQMTYCQME TEEIRRFCQE FEFQELQTWF QDLVTQYEKW AKFEIEWRNV RNDSIRQIEF PFPYREGQRD LVASVYRTIL RKKKLFIQAP TGVGKTMATV FPAVRAVGEG LGEKIFYLTA KTIMRTVAEQ AFSLLKEKGL LYKTITLTAK EKICFCEEAE CNPDACPYAK GHFDRVNDAV FDLITHSGDW SREVLEEQAK KHMVCPFEMS LDVSDWADAV ICDYNYAFDP QAHLKRFFSE SGKGEYLFLI DEAHNLVERG REMYSASLYK EDLLEVRKMV KAEDPKLAKG LSECNQQFLE LKRECEHYQI LKSVSHIALK LMNVLSKLED YLEECKDAEK KKRVLDFYFA VRSFLNIHDI MDENYVIFSE MMEDGRFQIK LFCVNPAVNL QNYLEQGNST IFFSATLLPV HYYKKLLSVE KDDYAVYAHS SFPQENKFLF IGTDVSTRYT RRGESTYQRF ARYIAVMAEQ KKGNYMAFFP SYRFLEEVHT CFLECVDHEV DSICQVSYMD EEQREEFLEE FEQEREKSLV AFCVMGGIFS EGIDLTDDKL IGAVIAGTGL PQVCTEREIL KQYFNAADMD GFDYAYLYPG MNKVLQSAGR VIRTESDRGV ILLLDDRFRA MRYREVFPRE WQQYQLGSVK NLEQEIRTFW ESP // ID R6GU48_9FIRM Unreviewed; 832 AA. AC R6GU48; DT 24-JUL-2013, integrated into UniProtKB/TrEMBL. DT 24-JUL-2013, sequence version 1. DT 11-MAY-2016, entry version 14. DE SubName: Full=DEAD2 domain protein {ECO:0000313|EMBL:CDB17607.1}; GN ORFNames=BN476_01193 {ECO:0000313|EMBL:CDB17607.1}; OS Eubacterium hallii CAG:12. OC Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; OC Eubacterium; environmental samples. OX NCBI_TaxID=1263078 {ECO:0000313|EMBL:CDB17607.1, ECO:0000313|Proteomes:UP000018069}; RN [1] {ECO:0000313|EMBL:CDB17607.1, ECO:0000313|Proteomes:UP000018069} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=MGS:12 {ECO:0000313|Proteomes:UP000018069}; RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., RA Sunagawa S., Plichta D., Gautier L., Le Chatelier E., Peletier E., RA Bonde I., Nielsen T., Manichanh C., Arumugam M., Batto J., RA Santos M.B.Q.D., Blom N., Borruel N., Burgdorf K.S., Boumezbeur F., RA Casellas F., Dore J., Guarner F., Hansen T., Hildebrand F., Kaas R.S., RA Kennedy S., Kristiansen K., Kultima J.R., Leonard P., Levenez F., RA Lund O., Moumen B., Le Paslier D., Pons N., Pedersen O., Prifti E., RA Qin J., Raes J., Tap J., Tims S., Ussery D.W., Yamada T., RA MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P., Wang J., RA Brunak S., Ehrlich S.D.; RT "Dependencies among metagenomic species, viruses, plasmids and units RT of genetic variation."; RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:CDB17607.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CBDD010000064; CDB17607.1; -; Genomic_DNA. DR Proteomes; UP000018069; Unassembled WGS sequence. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 5. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW Complete proteome {ECO:0000313|Proteomes:UP000018069}; KW Reference proteome {ECO:0000313|Proteomes:UP000018069}. FT DOMAIN 222 475 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 832 AA; 96389 MW; 77E3AB9001949224 CRC64; MLSYQKGVVK TSVRHLVEFL FRGGDITTGS SVSVSPEAML EGSRLHRKIQ RGQKATYQSE VPLKMEWQEE GYDLVLEGRA DGIDKTEVNK DRLSDVDGMN QTESDEEKLQ HVIGMNQIES NEEKLTYVDE IKCVYRDVEE IEEADILHLA QAKCYAYMYG VKQDLEKIGV QITYCHLETE QIKRIFYCYT MGELSLWFAE VLDAYRMWAA YYVEAREKRN ASIQALQFPF SFRPGQKKMT AIAYQAMENK KHIFLQAPTG VGKTISTLYP ALKELGAEKA ENIFYLTAKT ITRTVAEDTI KLLKKQGLFL SAVTITAKEK ICIQEEMQCN PESCERAKGH FDRINEALYA LLTAECEISR ENILLFAEKY KVCPYELSFE AAVWADCIIC DYNYVFDPHV NRKSLIEGSL RQNIYLIDEA HNLLDRAREM YSADIAKSDF KVPKKYFKDR NRFLFKKLGN CVMALRKLEK QAQDGTRFSL HENVDAMYFP IFHLIGPLEE YLADHDNFSE REEIVEFYFK LTHFYMMLDS MDSGYEIYSE KRGRDFLLRL FCVNPSDKLE EYIENSRSSI FFSATLLPVQ YYRQLLGGNR FEAYQIASPF AKENRLLAIT EDVTSRYTRR GEWEYGKMIR YLELCLEKKA GNYMIFFPSY EMLTSVYGMA EQSNLALVSE LIVQEPSMEE RSREAFLEKF REQSGKPLIG FCVLGSIFSE GIDLTGNSLI GVLIVGTGLP QICNEREVIR AYFDRQQKKG YDYAYRYPGM NKVLQAAGRV IRTAEDVGTI LLMDERFLER DNQSLLPEEW ESYYAVNRNN CGQVLENFWN GLDNDKVEEA ES // ID R6Q1W0_9CLOT Unreviewed; 790 AA. AC R6Q1W0; DT 24-JUL-2013, integrated into UniProtKB/TrEMBL. DT 24-JUL-2013, sequence version 1. DT 11-MAY-2016, entry version 16. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CDC24696.1}; GN ORFNames=BN618_00199 {ECO:0000313|EMBL:CDC24696.1}; OS Clostridium nexile CAG:348. OC Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; OC Clostridium; environmental samples. OX NCBI_TaxID=1263069 {ECO:0000313|EMBL:CDC24696.1, ECO:0000313|Proteomes:UP000018368}; RN [1] {ECO:0000313|EMBL:CDC24696.1, ECO:0000313|Proteomes:UP000018368} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=MGS:348 {ECO:0000313|Proteomes:UP000018368}; RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., RA Sunagawa S., Plichta D., Gautier L., Le Chatelier E., Peletier E., RA Bonde I., Nielsen T., Manichanh C., Arumugam M., Batto J., RA Santos M.B.Q.D., Blom N., Borruel N., Burgdorf K.S., Boumezbeur F., RA Casellas F., Dore J., Guarner F., Hansen T., Hildebrand F., Kaas R.S., RA Kennedy S., Kristiansen K., Kultima J.R., Leonard P., Levenez F., RA Lund O., Moumen B., Le Paslier D., Pons N., Pedersen O., Prifti E., RA Qin J., Raes J., Tap J., Tims S., Ussery D.W., Yamada T., RA MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P., Wang J., RA Brunak S., Ehrlich S.D.; RT "Dependencies among metagenomic species, viruses, plasmids and units RT of genetic variation."; RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:CDC24696.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CBEY010000112; CDC24696.1; -; Genomic_DNA. DR Proteomes; UP000018368; Unassembled WGS sequence. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 4. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR014001; Helicase_ATP-bd. DR InterPro; IPR001650; Helicase_C. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF00270; DEAD; 1. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00487; DEXDc; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. DR PROSITE; PS51194; HELICASE_CTER; 1. PE 4: Predicted; KW Complete proteome {ECO:0000313|Proteomes:UP000018368}; KW Reference proteome {ECO:0000313|Proteomes:UP000018368}. FT DOMAIN 183 468 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT DOMAIN 583 744 Helicase C-terminal. FT {ECO:0000259|PROSITE:PS51194}. SQ SEQUENCE 790 AA; 92254 MW; 043803CDE917BDFE CRC64; MEEKIIRISV RNLVEFILRE GDIDNRKAGL PDKEAMQLGG RIHRKIQRQM GSDYYAEVPL KITVPCEGFA IQIEGRADGI QKTADGVVVD EIKGVLRELE YIEKPVSVHL AQAKCYGYIY GKQQELDSIT IQMTYCQMET EEVKRFQETF SIEELERWFL DIVMQYEKWA RFQVEWRQTR DATIKEAEFP YPYREGQREL VTSVYRTILR KKKLFIQAPT GVGKTMATIF PAVKAVGEGL GDKIFYLTAK TITRTVAEQA FQILKKNGLQ YKVATLTAKE KICFCEKAEC NPDACPYAKG HFDRVNDAVY EMITTMEEMS RENIETQAKK HSVCPFEMGL DVSLWVDAII CDYNYVFDPN AHLKRFFSEG KKGEYLFLID EAHNLVERGR EMYSAVLYKE EFLQMKKAVR YESVKLTRQL AGCNQMLLEM KRECQTYKEY NSISHFALKL LNVMNGLQKL LEEKEQVDEE VLEFYFHVRN FLNIYEEVDE NYVIYAELEE GGDFKLKLFC VNPAVKLQNF LSQGNSTVFF SATLLPIRYY KRLLSVETDD YAVYAHSPFK EANRLLVLGQ DVSTKYTRRG YEMYERFAIY IKNVMQAKPG NYLVFFPSYR FMEEVRETFE RYRTEEMCCM IQEQNMNEQD REAFLQEFEA EREGSLAGFC VMGGIFSEGI DLTKERLIGA MIVGTGLPQV CNEREILKQY FDRHGENGFD YAYLYPGMNK VLQAAGRVIR TEEDKGVIAL LDDRFAGRRY LEIFPREWRK LTYCNVKTIG EKVEQFWKNA YIEPESDISV // ID R6RCS9_9FIRM Unreviewed; 787 AA. AC R6RCS9; DT 24-JUL-2013, integrated into UniProtKB/TrEMBL. DT 24-JUL-2013, sequence version 1. DT 11-MAY-2016, entry version 17. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CDC43089.1}; GN ORFNames=BN652_00205 {ECO:0000313|EMBL:CDC43089.1}; OS Firmicutes bacterium CAG:424. OC Bacteria; Firmicutes; environmental samples. OX NCBI_TaxID=1263022 {ECO:0000313|EMBL:CDC43089.1, ECO:0000313|Proteomes:UP000018167}; RN [1] {ECO:0000313|EMBL:CDC43089.1, ECO:0000313|Proteomes:UP000018167} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=MGS:424 {ECO:0000313|Proteomes:UP000018167}; RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., RA Sunagawa S., Plichta D., Gautier L., Le Chatelier E., Peletier E., RA Bonde I., Nielsen T., Manichanh C., Arumugam M., Batto J., RA Santos M.B.Q.D., Blom N., Borruel N., Burgdorf K.S., Boumezbeur F., RA Casellas F., Dore J., Guarner F., Hansen T., Hildebrand F., Kaas R.S., RA Kennedy S., Kristiansen K., Kultima J.R., Leonard P., Levenez F., RA Lund O., Moumen B., Le Paslier D., Pons N., Pedersen O., Prifti E., RA Qin J., Raes J., Tap J., Tims S., Ussery D.W., Yamada T., RA MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P., Wang J., RA Brunak S., Ehrlich S.D.; RT "Dependencies among metagenomic species, viruses, plasmids and units RT of genetic variation."; RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:CDC43089.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CBFI010000016; CDC43089.1; -; Genomic_DNA. DR Proteomes; UP000018167; Unassembled WGS sequence. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 4. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR001650; Helicase_C. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. DR PROSITE; PS51194; HELICASE_CTER; 1. PE 4: Predicted; KW Complete proteome {ECO:0000313|Proteomes:UP000018167}; KW Reference proteome {ECO:0000313|Proteomes:UP000018167}. FT DOMAIN 186 438 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT DOMAIN 595 777 Helicase C-terminal. FT {ECO:0000259|PROSITE:PS51194}. SQ SEQUENCE 787 AA; 91815 MW; 42A20A20D426F2F5 CRC64; MENQKKEIIQ ISVRNLVEFI LRSGNLDNRR SFAADKEAML KGSKIHRKIQ KQMKASYRAE VPLGWDQEYD EFIIRVEGRA DGIIEEDGET VIDEIKGVYM DLAYLEEPVS VHKAQAMCYA YMYGKPLKKE EIQVQMTYCQ IETEEIRRFR DNFTLSYLEK WFEDLMAEYY KWAEFQYRRR IERRISMEGL EFPYPYREGQ RELVTGVYHT IHKGRQLFIQ APTGIGKTMA AIFPTVRAVG EGYGDKIFYL TAKTITRTVA EEAFAILKGK GLSYKTLSIT AKEKLCLCEE TECNPEKCPY AKGHFDRVND AVFDLLNSKD TFLREELLAQ AEVYQVCPYE MCLDVSTWVD AIICDYNYAF DPKVHLKRFF GDSVRGDYLF LIDEAHNLVE RGRKMYSATL CKEDFLELAR IVKEVSGKLY WILKKCNKHL LEYKRECDNY EVLENIAGFS LQLMNLLGEM EHFLEQEHEE KVQKAVLEFS FEVRHFLNMY ELTDENYVIY THYGEQENFL ITLFCVNPRK NLQECLNKGK ATVFFSGTFL PLPYYRSLFS MREDDYAICA SSPFPRGNLK LLVARDVSSK YTRRDAGEYE KMAEYILQML LGKKGNYLVF FPSYRMMEDI CDVLEEKLEK SNSRVQCLYQ TPSMSEQERE EFLEQFQEEG EKTLAGFCVM GGIFSEGIDL AGKKLIGAAI VGTGLPQVGS EREILKEYYD RKGNMGFAYA YRYPGMNKVL QAAGRVIRTK TDRGIVLLLD ERFLQRSYQE LFPVEWQGYD VCTVSQVGEK IGRFWNT // ID R6TW32_9CLOT Unreviewed; 791 AA. AC R6TW32; DT 24-JUL-2013, integrated into UniProtKB/TrEMBL. DT 24-JUL-2013, sequence version 1. DT 11-MAY-2016, entry version 15. DE SubName: Full=Helicase c2 {ECO:0000313|EMBL:CDC62822.1}; GN ORFNames=BN660_01698 {ECO:0000313|EMBL:CDC62822.1}; OS Clostridium sp. CAG:448. OC Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; OC Clostridium; environmental samples. OX NCBI_TaxID=1262808 {ECO:0000313|EMBL:CDC62822.1, ECO:0000313|Proteomes:UP000018074}; RN [1] {ECO:0000313|EMBL:CDC62822.1, ECO:0000313|Proteomes:UP000018074} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=MGS:448 {ECO:0000313|Proteomes:UP000018074}; RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., RA Sunagawa S., Plichta D., Gautier L., Le Chatelier E., Peletier E., RA Bonde I., Nielsen T., Manichanh C., Arumugam M., Batto J., RA Santos M.B.Q.D., Blom N., Borruel N., Burgdorf K.S., Boumezbeur F., RA Casellas F., Dore J., Guarner F., Hansen T., Hildebrand F., Kaas R.S., RA Kennedy S., Kristiansen K., Kultima J.R., Leonard P., Levenez F., RA Lund O., Moumen B., Le Paslier D., Pons N., Pedersen O., Prifti E., RA Qin J., Raes J., Tap J., Tims S., Ussery D.W., Yamada T., RA MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P., Wang J., RA Brunak S., Ehrlich S.D.; RT "Dependencies among metagenomic species, viruses, plasmids and units RT of genetic variation."; RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:CDC62822.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CBFP010000285; CDC62822.1; -; Genomic_DNA. DR Proteomes; UP000018074; Unassembled WGS sequence. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 5. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000313|EMBL:CDC62822.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000018074}; KW Helicase {ECO:0000313|EMBL:CDC62822.1}; KW Hydrolase {ECO:0000313|EMBL:CDC62822.1}; KW Nucleotide-binding {ECO:0000313|EMBL:CDC62822.1}; KW Reference proteome {ECO:0000313|Proteomes:UP000018074}. FT DOMAIN 170 431 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 791 AA; 89081 MW; 010AA06EE9DA4D01 CRC64; MRYSPKTNSL ELTVEEMCAY VCHDSDLTRR VRSGRRDFAD GRGKRFFSHT DVAAGVVYTV SGYAECITGE DGTAVLTERC SVRYAGEGSQ EKQRALLYLQ CMGYLYAVTQ PADRVCLRLV CHARRDGGET VEEYRKSLDE LRILYIGILE HLEHRAKFLL HRSLDCLPTA ADAAFPYPAL REGQEELIRE CYYDLCSGTR LFAEAPTGIG KTVSTLYPAA KAVGKGVIDR VFYLTAKAST RREAFAACKK LYDAGTRLRC MILYAREQLC PYASSAKGCG DEQCRPEQCP LAKGYYDRAE TAVFEMLAKR FGYTREILIE TAQRYAVCPY ELSLDLSAYC DIIICDYNYV FSPSVYLRRY FDPVSGEGGR YAFLVDEAHN LADRAREMYS AAIRLSSFSR FAEMLRETED TSILSQTEDM VAFLRKLGNL CEGEIRYDAE GVRYGFYKSE EPFADFPEQV HAYTAALRRY LYANADSPLA DAATGILSQL RTYMTVCAYD ENAFLFYVDI AGEEITVGVF CMDPSNILDR ILARAKSCVL FSATFSPIDY YISVLGGGKN AVRICCPSPF PKENLCVIAA NFVSTRYEDR DKSYKRVCAA IAGAVCAKAG NYMVYFPSYS YMEKVFALFE KQYPKVCKIK QSPHMSMAER EQFISFFRAD TGKLRIGFCV LGGLFSEGID LPGSMLIGSL IVGTGLPGIT SYRNLLCEYY NRENGEGYAY AYTYPGLVNV MQAAGRVIRT EKDRGVVVLI DDRYVTDRYI PLLPERWRNM KIAGNAESLA EIAREFWKSG E // ID R6UMU1_9FIRM Unreviewed; 781 AA. AC R6UMU1; DT 24-JUL-2013, integrated into UniProtKB/TrEMBL. DT 24-JUL-2013, sequence version 1. DT 11-MAY-2016, entry version 15. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CDC87083.1}; GN ORFNames=BN746_01444 {ECO:0000313|EMBL:CDC87083.1}; OS Erysipelotrichaceae bacterium CAG:64. OC Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; OC Erysipelotrichaceae; environmental samples. OX NCBI_TaxID=1262981 {ECO:0000313|EMBL:CDC87083.1, ECO:0000313|Proteomes:UP000018179}; RN [1] {ECO:0000313|EMBL:CDC87083.1, ECO:0000313|Proteomes:UP000018179} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=MGS:64 {ECO:0000313|Proteomes:UP000018179}; RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., RA Sunagawa S., Plichta D., Gautier L., Le Chatelier E., Peletier E., RA Bonde I., Nielsen T., Manichanh C., Arumugam M., Batto J., RA Santos M.B.Q.D., Blom N., Borruel N., Burgdorf K.S., Boumezbeur F., RA Casellas F., Dore J., Guarner F., Hansen T., Hildebrand F., Kaas R.S., RA Kennedy S., Kristiansen K., Kultima J.R., Leonard P., Levenez F., RA Lund O., Moumen B., Le Paslier D., Pons N., Pedersen O., Prifti E., RA Qin J., Raes J., Tap J., Tims S., Ussery D.W., Yamada T., RA MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P., Wang J., RA Brunak S., Ehrlich S.D.; RT "Dependencies among metagenomic species, viruses, plasmids and units RT of genetic variation."; RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:CDC87083.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CBGA010000196; CDC87083.1; -; Genomic_DNA. DR Proteomes; UP000018179; Unassembled WGS sequence. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 4. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR001650; Helicase_C. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF00270; DEAD; 1. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. DR PROSITE; PS51194; HELICASE_CTER; 1. PE 4: Predicted; KW Complete proteome {ECO:0000313|Proteomes:UP000018179}; KW Reference proteome {ECO:0000313|Proteomes:UP000018179}. FT DOMAIN 181 438 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT DOMAIN 587 773 Helicase C-terminal. FT {ECO:0000259|PROSITE:PS51194}. SQ SEQUENCE 781 AA; 90020 MW; 0540E2507DFE1279 CRC64; MRVYRCKMSV RALVESVWIG GDLVSTAPSI ERANLGSRIH RMLQSSAQGD YESEVFLKLS SELDDILFEI EGRADGVRKE DDQVTIEEIK TTAIPFSELN EPVMVHLAQA YCYGHMYLAE HVAPSIRIQM TYYQIDTEEI KQFDEEKTRE ELAAFYMDTL RRYVKWAALS RDLKISSSRT LKELKFPFPD YRSGQRDFAV AVYKTILDRE KLFASAPTGI GKTISTLFPS LKAIGEGKAE KVFYLCAKNV TATVAYDTLR LLYKQEVSFK SVAITAKDKI CFQDVRNCDP EVCPYAKGYY DRCQDALYEL LQETQFIDRE AVEKKAKEHL ICPFELSLDA SLYGDVIVCD YNYVFDPRVY LKRFFMEKGD YIFLVDEAHN LVDRARSMYS CELNKSAFLA AARNIPKQRK PLHAALRAVN REFLRLKKQC EEEGQNFIHQ KDPISSIRQR LADVIEQMDI YLQSEHEDTW DEELRDLYFS CINYNRISEF YDEDFVTCYE KQSSDIVLKQ LCLNPAHPLK ETCAMGRSTV FFSATLSPID YYLDLLGGTR KTRKLFLPSP FSAEKRKIVL CDAISTRYRN RDSSLHPIAA MIHAAVQAKT GNYIVFLPSY AYMKQVAQTF CEQFPDIHVS LQESGMKEEE KQHFLEHFNT TQELHVLFCV LGGMFSEGID LKGEKLIGTI IVGVGLPQVN PQQELLREHF DEVNETGYAY AYQVPGMNKV LQAAGRVIRS HSDIGIVLLI DERFTTPFYQ RLLPEHMRPF QIINDPTRLH AAVKQFWQQN S // ID R6Y2I9_9FIRM Unreviewed; 794 AA. AC R6Y2I9; DT 24-JUL-2013, integrated into UniProtKB/TrEMBL. DT 24-JUL-2013, sequence version 1. DT 11-MAY-2016, entry version 14. DE SubName: Full=DNA helicase Rad3 {ECO:0000313|EMBL:CDD22851.1}; GN ORFNames=BN617_00561 {ECO:0000313|EMBL:CDD22851.1}; OS Firmicutes bacterium CAG:345. OC Bacteria; Firmicutes; environmental samples. OX NCBI_TaxID=1263020 {ECO:0000313|EMBL:CDD22851.1, ECO:0000313|Proteomes:UP000018232}; RN [1] {ECO:0000313|EMBL:CDD22851.1, ECO:0000313|Proteomes:UP000018232} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=MGS:345 {ECO:0000313|Proteomes:UP000018232}; RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., RA Sunagawa S., Plichta D., Gautier L., Le Chatelier E., Peletier E., RA Bonde I., Nielsen T., Manichanh C., Arumugam M., Batto J., RA Santos M.B.Q.D., Blom N., Borruel N., Burgdorf K.S., Boumezbeur F., RA Casellas F., Dore J., Guarner F., Hansen T., Hildebrand F., Kaas R.S., RA Kennedy S., Kristiansen K., Kultima J.R., Leonard P., Levenez F., RA Lund O., Moumen B., Le Paslier D., Pons N., Pedersen O., Prifti E., RA Qin J., Raes J., Tap J., Tims S., Ussery D.W., Yamada T., RA MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P., Wang J., RA Brunak S., Ehrlich S.D.; RT "Dependencies among metagenomic species, viruses, plasmids and units RT of genetic variation."; RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:CDD22851.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CBGR010000016; CDD22851.1; -; Genomic_DNA. DR Proteomes; UP000018232; Unassembled WGS sequence. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 5. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR014001; Helicase_ATP-bd. DR InterPro; IPR001650; Helicase_C. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00487; DEXDc; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. DR PROSITE; PS51194; HELICASE_CTER; 1. PE 4: Predicted; KW ATP-binding {ECO:0000313|EMBL:CDD22851.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000018232}; KW Helicase {ECO:0000313|EMBL:CDD22851.1}; KW Hydrolase {ECO:0000313|EMBL:CDD22851.1}; KW Nucleotide-binding {ECO:0000313|EMBL:CDD22851.1}; KW Reference proteome {ECO:0000313|Proteomes:UP000018232}. FT DOMAIN 183 433 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT DOMAIN 596 782 Helicase C-terminal. FT {ECO:0000259|PROSITE:PS51194}. SQ SEQUENCE 794 AA; 92770 MW; 53957B5AD6495ED7 CRC64; MQKIISLSVH DIVDNILRSG SIDSRVFSSG TMQEGTRLHS VYQDEQSSVY QKEVSLSSTF TIGEYTFIVE GRADGIITDK NGKVTIDEIK TTVADLEEFY TENKDWHLGQ AQFYAYIYAL QNNLSEISIR LTYISQNNYA IRKFYDFDYN FEDLQRFVLK LVQTYYDHIL IFLNHEEKLK KDLSSFDFPY STYRKGQKEL IQTIYDAADN EEFAYIEAPT GIGKTAATLY PYIKKMQDKG EKIFYLTSKN SIKKVVLETI KFFNTKGVTI NAITINSKES LCINDKKRHC NPDECPFAVD YYQKVNAIIH AIYQEYPCLG FQDIISLSYR YQVCPFEFQL DLSTFYDVII ADYNHLFHPT AHLIRFFDEG PKNYYLLIDE AHNLPSRIRD MHSGQIDFYS FFLLYKDFRA ISFNHKKMYR LIKKVMDYFL NLDINEFPQE DFFGNVLKVD GIPDELFLVL DKFLEEGKNF LQEGGKDVTD QFLDVYYKAK SFLSLPESDE TYSYFFEISE NGKLLKFNAN CLDSRPFMRP AKNIFLSGTF FSATLTPQNF FLDLLKAEEK HEELFLPSPF PVENLKVLVN TNISTYYKDR DFTKKKIIQA ILAFVGGKTG NYFVFFPSYK YMTAIVDIFP LSKNYNFYIQ DAGMTTEKRE EFLAHFEKNP TKTNIGFVVL GGVFSEGIDL IDDRLIGAII IGVGLSMVNY ENDALKNYYD LNSSDDEEKQ GYLYSYVYPG INKFLQAAGR VIRSEFDKGM LLYIDMRYNT FPYRNILTEK YQNISYVYTE DEITQEVDDF WRNK // ID R7C597_9CLOT Unreviewed; 784 AA. AC R7C597; DT 24-JUL-2013, integrated into UniProtKB/TrEMBL. DT 24-JUL-2013, sequence version 1. DT 11-MAY-2016, entry version 16. DE SubName: Full=DEAD_2 domain protein {ECO:0000313|EMBL:CDD73241.1}; GN ORFNames=BN737_01842 {ECO:0000313|EMBL:CDD73241.1}; OS Clostridium sp. CAG:62. OC Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; OC Clostridium; environmental samples. OX NCBI_TaxID=1262828 {ECO:0000313|EMBL:CDD73241.1, ECO:0000313|Proteomes:UP000018137}; RN [1] {ECO:0000313|EMBL:CDD73241.1, ECO:0000313|Proteomes:UP000018137} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=MGS:62 {ECO:0000313|Proteomes:UP000018137}; RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., RA Sunagawa S., Plichta D., Gautier L., Le Chatelier E., Peletier E., RA Bonde I., Nielsen T., Manichanh C., Arumugam M., Batto J., RA Santos M.B.Q.D., Blom N., Borruel N., Burgdorf K.S., Boumezbeur F., RA Casellas F., Dore J., Guarner F., Hansen T., Hildebrand F., Kaas R.S., RA Kennedy S., Kristiansen K., Kultima J.R., Leonard P., Levenez F., RA Lund O., Moumen B., Le Paslier D., Pons N., Pedersen O., Prifti E., RA Qin J., Raes J., Tap J., Tims S., Ussery D.W., Yamada T., RA MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P., Wang J., RA Brunak S., Ehrlich S.D.; RT "Dependencies among metagenomic species, viruses, plasmids and units RT of genetic variation."; RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:CDD73241.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CBHQ010000012; CDD73241.1; -; Genomic_DNA. DR Proteomes; UP000018137; Unassembled WGS sequence. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR001650; Helicase_C. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 3. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. DR PROSITE; PS51194; HELICASE_CTER; 1. PE 4: Predicted; KW Complete proteome {ECO:0000313|Proteomes:UP000018137}; KW Reference proteome {ECO:0000313|Proteomes:UP000018137}. FT DOMAIN 176 425 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT DOMAIN 597 777 Helicase C-terminal. FT {ECO:0000259|PROSITE:PS51194}. SQ SEQUENCE 784 AA; 91374 MW; D1DF58E1B132B86C CRC64; MEFVFREGDI VSGGAGVRNV EAMQLGSRIH RKIQKSMGVG YESEVPLFTI QKFKSAEYEE DFSLKIEGRA DGIFTDGDLT VIDEIKGVYL PVQDLEKPLF IHQAQAMCYA YIVAENENLD EIGVQLTYCH METEQVVRFR ETFSRIEIVQ WFRNLMDEYE KWAVYQYDWK KQRNASITEL TFPFSYRPGQ KELAAMVYHT VEKGKRLFVE APTGVGKTIS TVFPTVKAMG EEVCDRIFYL TAKTITRTVA EDCFELLGKQ KLLFKTLTIT AKEKMCVMDT VSCNPGECER AKGHYNRVNE AVYDMLIHEH KMSRDMIEKY AEKHQVCPFE MALDAALFAD AVICDYNYVF DPNVYLRRFF STEKKGNMVL LVDEAHNLVE RGREMYSARL VKEDFLAVKK IVKAMERHEK RPEVHYILRK FEKSLEAANR VLLAWKRECD EFEVISDAGM LEFALLRVAG DYELVAKEYP VLPERDTILS LYFDVRRFLA VLEKFDESDR IYLDYDEERK FRIKIQCMDP SGCLKEVMER VQSTIFFSAT LLPIRYYKEQ LGGEKEDAAV YAKSVFLPEQ RKVMIARDVT TKYTRRGAAE YEKIAAYIDS FISAKEGNYL LFFPSYRFMD EIVTRLPNRE NQKILVQMPE MREREREEFL EAFSEETDKS VIGCCVMGGI FSEGIDLKEE CLIGAVVVGT GIPMVCHERE LFKDYYEEKK GDGFSYAYLY PAVNKVFQAG GRVIRTINDK GAILLLDERF MQKQYQDLFP REWYPFDVVN CEKMKELLAE FWQE // ID R7ETS5_9FIRM Unreviewed; 808 AA. AC R7ETS5; DT 24-JUL-2013, integrated into UniProtKB/TrEMBL. DT 24-JUL-2013, sequence version 1. DT 11-MAY-2016, entry version 15. DE SubName: Full=Helicase c2 {ECO:0000313|EMBL:CDE06035.1}; GN ORFNames=BN640_02096 {ECO:0000313|EMBL:CDE06035.1}; OS Anaerotruncus sp. CAG:390. OC Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; OC Anaerotruncus; environmental samples. OX NCBI_TaxID=1262703 {ECO:0000313|EMBL:CDE06035.1, ECO:0000313|Proteomes:UP000018385}; RN [1] {ECO:0000313|EMBL:CDE06035.1, ECO:0000313|Proteomes:UP000018385} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=MGS:390 {ECO:0000313|Proteomes:UP000018385}; RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., RA Sunagawa S., Plichta D., Gautier L., Le Chatelier E., Peletier E., RA Bonde I., Nielsen T., Manichanh C., Arumugam M., Batto J., RA Santos M.B.Q.D., Blom N., Borruel N., Burgdorf K.S., Boumezbeur F., RA Casellas F., Dore J., Guarner F., Hansen T., Hildebrand F., Kaas R.S., RA Kennedy S., Kristiansen K., Kultima J.R., Leonard P., Levenez F., RA Lund O., Moumen B., Le Paslier D., Pons N., Pedersen O., Prifti E., RA Qin J., Raes J., Tap J., Tims S., Ussery D.W., Yamada T., RA MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P., Wang J., RA Brunak S., Ehrlich S.D.; RT "Dependencies among metagenomic species, viruses, plasmids and units RT of genetic variation."; RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:CDE06035.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CBID010000369; CDE06035.1; -; Genomic_DNA. DR Proteomes; UP000018385; Unassembled WGS sequence. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR014001; Helicase_ATP-bd. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00487; DEXDc; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 5. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000313|EMBL:CDE06035.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000018385}; KW Helicase {ECO:0000313|EMBL:CDE06035.1}; KW Hydrolase {ECO:0000313|EMBL:CDE06035.1}; KW Nucleotide-binding {ECO:0000313|EMBL:CDE06035.1}; KW Reference proteome {ECO:0000313|Proteomes:UP000018385}. FT DOMAIN 187 445 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 808 AA; 89734 MW; 0C7410F720B3773B CRC64; MRFDREKNCL FIGVREFCRV SCTSGDIDLR KSQIETDTDN HKILESGAGE GAEIERELEL TVPFTDFNVC LRGRVDIVHP ASDDGRTTLP YEVEEIKTVP PQMLGGAPAV QHTAQMRLYA LMFCESRGVE RICCRLTYVS PDGSKKRSFT EKHSADDLRF YLATLLEKAA FRLYDERDRI LTRRASAESA KFPYPELRSG QRDLINSVYS AMKGGRRLFA QAPTGIGKTV STLYGAIRAL GDGFGSRIFY LTAKASTRRE AYRAAAALAG AGLGLRTVVL FSREQCCTNP AAGPGGGSLF CNPDSCPYAR GYYDRRDDVL RTLTSLYHGF SRSAIISAAS SAGVCPYELS LDLAELCDII ICDYNYVFDP AVRLRRFFAE GAEGDSLLLV DEAHNLPDRA RSIYSADFNT AYLSDFGTYI PSLGDKIKEN AEELIKQLKK LRSYCSDNLY RNDDGSEVGY YVGREIPPGI GDSIAALGDA CESYLRVNSA SARAEASPAV FACSSMARLC RKWRSAADAY DDRYRTYIDI SGGNILLRQY CLDPSEAVDA AMNKIRAAVF FSATLTPYDY FSEILGGGRN AEYLSLPSPF PQENLFIAAV TSVSTRYEDR EKSAKRMSGV ITAAVSARAG NYIVYFPSYR YLDAVYSCFT KKHPGVRVIK QTPKMSQQEK EALISFFGDD KGVLRVGFCV LGGSFSEGMD LPGDRLIGTV IAGVGLPGLS FERNLIRDYY QNKVEDGYNY AYTYPGMNRV LQAAGRVIRR PTDRGVVILA DDRYAAPPYT ALYPPHWKRI RRIDNIADLP QALRAFWN // ID R7FK24_9CLOT Unreviewed; 782 AA. AC R7FK24; DT 24-JUL-2013, integrated into UniProtKB/TrEMBL. DT 24-JUL-2013, sequence version 1. DT 11-MAY-2016, entry version 14. DE SubName: Full=DEAD_2 domain protein {ECO:0000313|EMBL:CDE15679.1}; GN ORFNames=BN588_00773 {ECO:0000313|EMBL:CDE15679.1}; OS Clostridium sp. CAG:288. OC Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; OC Clostridium; environmental samples. OX NCBI_TaxID=1262791 {ECO:0000313|EMBL:CDE15679.1, ECO:0000313|Proteomes:UP000017968}; RN [1] {ECO:0000313|EMBL:CDE15679.1, ECO:0000313|Proteomes:UP000017968} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=MGS:288 {ECO:0000313|Proteomes:UP000017968}; RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., RA Sunagawa S., Plichta D., Gautier L., Le Chatelier E., Peletier E., RA Bonde I., Nielsen T., Manichanh C., Arumugam M., Batto J., RA Santos M.B.Q.D., Blom N., Borruel N., Burgdorf K.S., Boumezbeur F., RA Casellas F., Dore J., Guarner F., Hansen T., Hildebrand F., Kaas R.S., RA Kennedy S., Kristiansen K., Kultima J.R., Leonard P., Levenez F., RA Lund O., Moumen B., Le Paslier D., Pons N., Pedersen O., Prifti E., RA Qin J., Raes J., Tap J., Tims S., Ussery D.W., Yamada T., RA MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P., Wang J., RA Brunak S., Ehrlich S.D.; RT "Dependencies among metagenomic species, viruses, plasmids and units RT of genetic variation."; RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:CDE15679.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CBIJ010000015; CDE15679.1; -; Genomic_DNA. DR Proteomes; UP000017968; Unassembled WGS sequence. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 5. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR001650; Helicase_C. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. DR PROSITE; PS51194; HELICASE_CTER; 1. PE 4: Predicted; KW Complete proteome {ECO:0000313|Proteomes:UP000017968}; KW Reference proteome {ECO:0000313|Proteomes:UP000017968}. FT DOMAIN 181 427 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT DOMAIN 587 770 Helicase C-terminal. FT {ECO:0000259|PROSITE:PS51194}. SQ SEQUENCE 782 AA; 90794 MW; C0C358B29E8E653C CRC64; MIKQLNLSVH DVVDLVLRKG SLDTRVFNQS SMAEGTRLHS VFQKGQNSNY IAEYQLNAYI DVDDYVFYLN GRADGVIHQE DIWIIDEIKT TVEKIELFHL ENEEWHLGQA IFYAYMLSLE KTLDKVYVRL TYIHQKSEEE NQIFEKAYTF AELETYVFDV LRSYIEYVKK IEARIKDRNE SISNFDFPYE QMRSGQDEMI KFASDIVASN SVGYVEAPTG IGKTSSALFP YIKSLVQPGK EKIFYLTSKN SIKESVFKLL YYMIAKGLKV TSVFLTSKDT LCINDKKRHC NPDECPFAVG YYDKVNKVIF QELENREIFT QGDILAIAKE YNICPFEFQL DLSMYVDIVV GDYNYVFDPT ASLIRYFEDG FKKPYLLLVD EAHNLPSRTR EMYSAELSIF DFLKLKKEMP NINSRKIKSL TNKLIDYFKD YECCSDHVEL ECVPDDLEDM LSEFLERAKT VIKDFPKEVN DTFLDVYFKV NSFLNLPQED TDNFAYYFVA SEGKALSIKI TCLDSRRYIR RQTAMFSSAL FFSATLSPHN FYIDLLGGND ESNTLYLPSP FSLENRLVMV DGNISTYYKD REKSLKEIAK LIVEVVKQKV GNYFVFFPSY EYMEKCYSLF EYTTSIDILT QNRNMDNYER SNFLSSFKEN PKKTTVGFII MGGIFSEGID LLSDRLIGAI IIGVCLPKIS YENDLIKKHE GLEDSDVGFN YAYVYPGFNR VLQAAGRVIR SEKDKGVIVL VDSRFRTSKY KELYENIWPD AIEVNSASEA GEYTSQFWEE KK // ID R7G4A8_9FIRM Unreviewed; 781 AA. AC R7G4A8; DT 24-JUL-2013, integrated into UniProtKB/TrEMBL. DT 24-JUL-2013, sequence version 1. DT 11-MAY-2016, entry version 16. DE SubName: Full=DEAD2 domain protein {ECO:0000313|EMBL:CDE21776.1}; GN ORFNames=BN631_00696 {ECO:0000313|EMBL:CDE21776.1}; OS Eubacterium dolichum CAG:375. OC Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; OC Eubacterium; environmental samples. OX NCBI_TaxID=1263076 {ECO:0000313|EMBL:CDE21776.1, ECO:0000313|Proteomes:UP000018093}; RN [1] {ECO:0000313|EMBL:CDE21776.1, ECO:0000313|Proteomes:UP000018093} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=MGS:375 {ECO:0000313|Proteomes:UP000018093}; RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., RA Sunagawa S., Plichta D., Gautier L., Le Chatelier E., Peletier E., RA Bonde I., Nielsen T., Manichanh C., Arumugam M., Batto J., RA Santos M.B.Q.D., Blom N., Borruel N., Burgdorf K.S., Boumezbeur F., RA Casellas F., Dore J., Guarner F., Hansen T., Hildebrand F., Kaas R.S., RA Kennedy S., Kristiansen K., Kultima J.R., Leonard P., Levenez F., RA Lund O., Moumen B., Le Paslier D., Pons N., Pedersen O., Prifti E., RA Qin J., Raes J., Tap J., Tims S., Ussery D.W., Yamada T., RA MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P., Wang J., RA Brunak S., Ehrlich S.D.; RT "Dependencies among metagenomic species, viruses, plasmids and units RT of genetic variation."; RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:CDE21776.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CBIN010000020; CDE21776.1; -; Genomic_DNA. DR Proteomes; UP000018093; Unassembled WGS sequence. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 4. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR001650; Helicase_C. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 5. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. DR PROSITE; PS51194; HELICASE_CTER; 1. PE 4: Predicted; KW Complete proteome {ECO:0000313|Proteomes:UP000018093}; KW Reference proteome {ECO:0000313|Proteomes:UP000018093}. FT DOMAIN 179 440 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT DOMAIN 585 759 Helicase C-terminal. FT {ECO:0000259|PROSITE:PS51194}. SQ SEQUENCE 781 AA; 91096 MW; 26E4A15601739302 CRC64; MISCKMSVRT LVEFVYQSGD LIASFNNIER ANLGSRIHRQ LQAQGGEHYQ SEVFLSNTTT LDNVCFTIEG RADGIIIQDH QVILEEIKTT AIPYEQLEER QLVHLAQAYC YGYFYLCNHA CTQLTIRLTY YQINEQKTKS FNQVKTFQEL KDFYLDTLKQ YLRWANISHT IHTTSTSDLQ RLVFPFPEYR KGQRKLAIAV YKTILDHDIL FAQAPTGIGK TISTLFPGLK AIGEGKIEKI FYVCAKNITA QVAYDALQQL YKQNLHFKSV AITAKDKICL LAERNCDPQN CPYAKGYYNR NKNALYELIT QHDFIDYERL VEYGKKYVVC PFELGLDASE YSDVIIGDYN YVFDPRVYLK RFFIDKGNYL FLVDEAHNLV DRAREMYSAE LSKQDFQIIK AYIPKSFAKL HKAHHQLNKQ FISLRKQCEE KQLDFLAQKE AMPFFLQCLE KLTNELNEYL EGNHENEMED ALRELYFKAL HYQRIAEFYD EHFTTCIQRQ KQDVWIRQYC MNPSQPIKNI LRKGRATIFF SATLSPIDYY LTLLGGNHDS KRLSLPSPFP KEHVHVMIAN QISTRYRQRS QSIDAICELL YAAITQRNGN YILFAPSYAY MKQLYEHFIK SYPDIDVFYQ QQDMTEEEKQ TFLAQFQISK HLRLYFCVCG GMFSEGIDLK GDALIGVILV GVGLPQINPY SDLIRQHFDE ENQQGYAYAY QYPGMNKILQ SAGRLIRSHE DKGILLFIDE RYTSLHYRGA LPSHLHPYTI VHTPQEVRSS TQAFWKKALS D // ID R7Z150_CONA1 Unreviewed; 791 AA. AC R7Z150; DT 24-JUL-2013, integrated into UniProtKB/TrEMBL. DT 24-JUL-2013, sequence version 1. DT 11-MAY-2016, entry version 19. DE SubName: Full=DNA repair helicase rad15 {ECO:0000313|EMBL:EON67887.1}; GN ORFNames=W97_07384 {ECO:0000313|EMBL:EON67887.1}; OS Coniosporium apollinis (strain CBS 100218) (Rock-inhabiting black OS yeast). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; OC Chaetothyriomycetidae; Chaetothyriales; Herpotrichiellaceae; OC Coniosporium. OX NCBI_TaxID=1168221 {ECO:0000313|EMBL:EON67887.1, ECO:0000313|Proteomes:UP000016924}; RN [1] {ECO:0000313|Proteomes:UP000016924} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=CBS 100218 {ECO:0000313|Proteomes:UP000016924}; RG The Broad Institute Genome Sequencing Platform; RA Cuomo C., Gorbushina A., Noack S., Walker B., Young S.K., Zeng Q., RA Gargeya S., Fitzgerald M., Haas B., Abouelleil A., Alvarado L., RA Arachchi H.M., Berlin A.M., Chapman S.B., Goldberg J., Griggs A., RA Gujja S., Hansen M., Howarth C., Imamovic A., Larimer J., McCowan C., RA Montmayeur A., Murphy C., Neiman D., Pearson M., Priest M., RA Roberts A., Saif S., Shea T., Sisk P., Sykes S., Wortman J., RA Nusbaum C., Birren B.; RT "The genome sequence of Coniosporium apollinis CBS 100218."; RL Submitted (JUN-2012) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; JH767591; EON67887.1; -; Genomic_DNA. DR RefSeq; XP_007783204.1; XM_007785014.1. DR EnsemblFungi; EON67887; EON67887; W97_07384. DR GeneID; 19904695; -. DR Proteomes; UP000016924; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EON67887.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000016924}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EON67887.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EON67887.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EON67887.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000016924}. FT DOMAIN 7 295 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 791 AA; 90319 MW; 0194E7D21333A810 CRC64; MADRRSDLPI LFPYPRIYPE QYEYMCALKK TLDAGGHCVL EMPSGTGKTV TLLSLIVAYQ QHHPEKRKLI YCSRTMSEIE KALAELKALM KYRTEQLGYE EDFRGLGLTS RKNLCLHPSV KREKSGNVVD ARCRSLTAGF VKEKKERGED VELCVYHENL DLLEPHNLIP PGVWTLDGLL RYGEQQKQCP YFTARRMMPF CNVIIYSYHY LLDPKIAERV SKELSKDCIV VFDEAHNIDN VCIESLSIDI TDDSLKKATT AANSLDRKIT EMKSTDAEKL QNEYAKLVEG LRDADEARDE DAFMANPALP DDLLKEAVPG NIRRAEHFIS FLKRFIEYLK TRMKVLHVIS ETPPSFLNHV KELTFIEKKP LRFCAERLTS LVRTLELTNI EDYQALQEVA TFATLVSTYD TGFLLILEPF ETETATVPNP VLHFTCLDAA IAIKPVFERF SSVIITSGTI SPMEFYPKML GFTTVIEQSF TMTLARKSFL PMIVTRGSDQ GAISSGFQTR NDPSVVRNYG NLLIEFCKLT PDGVVVFFPS YLYMESTIAN WQGAGILDSI WKYKLILVET PDSQETSLAL ETYRTACNNG RGAVLLCVAR GKVSEGIDFD HHYGRTVLCI GVPFQYTESR ILKARLEFLR ETYHIKENDF LSFDAMRHAA QCLGRVLRGK DDYGIMVLAD RRFARKRKEL PNWINQMLPD SDANLSVDQA VAIARKFLRD MSVPYPERLQ EGVSRWSLED LERYKQKKEE EEIRHLQMRQ DGGSAMNGDH VMGGMEEFDV EEDEEALMAD L // ID R8BKB2_TOGMI Unreviewed; 715 AA. AC R8BKB2; DT 24-JUL-2013, integrated into UniProtKB/TrEMBL. DT 24-JUL-2013, sequence version 1. DT 11-MAY-2016, entry version 20. DE SubName: Full=Putative dna repair helicase rad3 protein {ECO:0000313|EMBL:EON99652.1}; GN ORFNames=UCRPA7_4893 {ECO:0000313|EMBL:EON99652.1}; OS Togninia minima (strain UCR-PA7) (Esca disease fungus) OS (Phaeoacremonium aleophilum). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; OC Sordariomycetes; Sordariomycetidae; Togniniales; Togniniaceae; OC Phaeoacremonium. OX NCBI_TaxID=1286976 {ECO:0000313|EMBL:EON99652.1, ECO:0000313|Proteomes:UP000014074}; RN [1] {ECO:0000313|Proteomes:UP000014074} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=UCR-PA7 {ECO:0000313|Proteomes:UP000014074}; RX PubMed=23814032; DOI=10.1128/genomeA.00390-13; RA Blanco-Ulate B., Rolshausen P., Cantu D.; RT "Draft genome sequence of the ascomycete Phaeoacremonium aleophilum RT strain UCR-PA7, a causal agent of the esca disease complex in RT grapevines."; RL Genome Announc. 1:E0039013-E0039013(2013). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; KB933141; EON99652.1; -; Genomic_DNA. DR RefSeq; XP_007915635.1; XM_007917444.1. DR EnsemblFungi; EON99652; EON99652; UCRPA7_4893. DR GeneID; 19325391; -. DR KEGG; tmn:UCRPA7_4893; -. DR KO; K10844; -. DR Proteomes; UP000014074; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EON99652.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000014074}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EON99652.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EON99652.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EON99652.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000014074}. FT DOMAIN 1 253 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 225 252 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 715 AA; 81824 MW; C6A5FB8BAB7E85F6 CRC64; MVDLKRTLDV GGKCVLEMPS GTGKTVTLLS LIVAYQQYYP SHRKLIYCSR TMSEIEKALV ELKGLLKFRT ERLGYEEEFR GLGLTSRKNL CLHPSVKQEK SGHVVDARCR SLTAGFIKEK KERGEHVENL DLLEPHNLIP NGVWTLDGLL QYGEQHKQCP YFTSRRMMQY CNVIIYSYHY LLDPKIAERV SKELSKDCIV VFDEAHNIDN VCIESLSTDI TEDSLRRATR GAESLENKIN EMKESDQQKL QDEYEKLVKG IRGADDDGHQ EDSFVANPTL PDDLLKEAVP GNIRRAEHFI AFLKRFMEYL KVSCYNGPDF KLYYVLLTGP DEDEIRTLEL ANIEYYQSLQ EVATFATLVA TYENGFLLIL EPYESDTAEV PNPVLHFTCL DAAIAIKPVF DWFSSVIITS GTISPLEIYP KMLNFSTVVQ ESYSMTLARR SFLPMIVTRG SDQSSISTSF QVRNEPSVVR NYGNLLTEFA RIIPDGMVVF FPSYLYMESI ISMWQGMGIL DEVWKYKLIL VETPDAQETS LALETYRTAC CNGRGAVLLC VVRGKVSEGI DFDHQYGRTV ICMGIPFQYT ESRILKARLE FLRETYRIHE NDFLSFDAMR HAAQCLGRVL RGKDDYGLMV LADRRFQKKC AQLPKWINQA LLDADTNLST DMAVGSARRF LKTMAQPFRA KDQEGISMWS IEDLKRHQEK MFDDMVTGDV DMLEK // ID R8BY24_TOGMI Unreviewed; 595 AA. AC R8BY24; DT 24-JUL-2013, integrated into UniProtKB/TrEMBL. DT 24-JUL-2013, sequence version 1. DT 11-MAY-2016, entry version 23. DE SubName: Full=Putative dna repair helicase rad3 protein {ECO:0000313|EMBL:EOO04253.1}; GN ORFNames=UCRPA7_149 {ECO:0000313|EMBL:EOO04253.1}; OS Togninia minima (strain UCR-PA7) (Esca disease fungus) OS (Phaeoacremonium aleophilum). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; OC Sordariomycetes; Sordariomycetidae; Togniniales; Togniniaceae; OC Phaeoacremonium. OX NCBI_TaxID=1286976 {ECO:0000313|EMBL:EOO04253.1, ECO:0000313|Proteomes:UP000014074}; RN [1] {ECO:0000313|Proteomes:UP000014074} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=UCR-PA7 {ECO:0000313|Proteomes:UP000014074}; RX PubMed=23814032; DOI=10.1128/genomeA.00390-13; RA Blanco-Ulate B., Rolshausen P., Cantu D.; RT "Draft genome sequence of the ascomycete Phaeoacremonium aleophilum RT strain UCR-PA7, a causal agent of the esca disease complex in RT grapevines."; RL Genome Announc. 1:E0039013-E0039013(2013). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00051130}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00051146}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; KB932781; EOO04253.1; -; Genomic_DNA. DR RefSeq; XP_007910938.1; XM_007912747.1. DR EnsemblFungi; EOO04253; EOO04253; UCRPA7_149. DR GeneID; 19321642; -. DR KEGG; tmn:UCRPA7_149; -. DR KO; K10844; -. DR Proteomes; UP000014074; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00491; HELICc2; 1. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00442371, KW ECO:0000313|EMBL:EOO04253.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000014074}; KW Helicase {ECO:0000256|SAAS:SAAS00442371, ECO:0000313|EMBL:EOO04253.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00442371, KW ECO:0000313|EMBL:EOO04253.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00442371, KW ECO:0000313|EMBL:EOO04253.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000014074}. FT DOMAIN 1 93 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 59 101 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 595 AA; 68165 MW; 5FFA4FC058B88297 CRC64; MMQFCNVIIY SYHYLLDPKI AERVSRELSK DCIVVFDEAH NIDNVCIESL STDITEDSLR RATRGAQNLE KKISEMRETD QKQLENEYQK LVEGLRGADE ARQEDAFMAN PALPEDLLKE AVPGNIRRAE HFVAFLKRFI EYLKTRMKVR QVISETPPSF LAHLREYTFI EKKPLRFCAE RLTSLVRTLE LTNIEDYQPL QEVATFATLV STYEKGFLLI LEPFESDTAE VPNPILHFTC LDAAIAIKPV FERFSSVIIT SGTISPLEMY PKMLAFPTVV QESYSMTLAR KSFLPMIVTR GSDQASISTS FQVRNEPSVV RNYGNLLTEF AKITPDGMVV FFPSYLYMES IISMWQGMGI LDEVWKYKLI LVETPDAQET SLALETYRTA CCNGRGAVLL CVARGKVSEG IDFDHQYGRT VLCIGVPFQY TESRILKARL EFLRETYRIR ENDFLSFDAM RHAAQCLGRV LRGKDDYGIM VLADRRFQKK RTQLPKWINQ ALSDAETNLS TDMAVGSARK FLRTMAQPFR AKDQEGISTW SSEDLRKHQE KMDEEKIREL QDGLQMAGGP PQSMDEDEYG DIEELEEGMM ELDGI // ID R9AKH2_WALI9 Unreviewed; 1177 AA. AC R9AKH2; DT 24-JUL-2013, integrated into UniProtKB/TrEMBL. DT 24-JUL-2013, sequence version 1. DT 11-MAY-2016, entry version 23. DE SubName: Full=DNA repair helicase rad15 {ECO:0000313|EMBL:EOR02699.1}; GN ORFNames=J056_003261 {ECO:0000313|EMBL:EOR02699.1}; OS Wallemia ichthyophaga (strain EXF-994 / CBS 113033). OC Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; OC Wallemiomycetes; Wallemiales; Wallemiales incertae sedis; Wallemia. OX NCBI_TaxID=1299270 {ECO:0000313|EMBL:EOR02699.1, ECO:0000313|Proteomes:UP000014064}; RN [1] {ECO:0000313|Proteomes:UP000014064} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=EXF-994 / CBS 113033 {ECO:0000313|Proteomes:UP000014064}; RX PubMed=24034603; DOI=10.1186/1471-2164-14-617; RA Zajc J., Liu Y., Dai W., Yang Z., Hu J., Gostincar C., RA Gunde-Cimerman N.; RT "Genome and transcriptome sequencing of the halophilic fungus Wallemia RT ichthyophaga: haloadaptations present and absent."; RL BMC Genomics 14:617-617(2013). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; KE007227; EOR02699.1; -; Genomic_DNA. DR RefSeq; XP_009266759.1; XM_009268484.1. DR EnsemblFungi; EOR02699; EOR02699; J056_003261. DR GeneID; 20376213; -. DR KEGG; wic:J056_003261; -. DR KO; K10844; -. DR Proteomes; UP000014064; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EOR02699.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000014064}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EOR02699.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EOR02699.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EOR02699.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000014064}. FT DOMAIN 366 645 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 1177 AA; 132940 MW; 36D81AB60C580CBE CRC64; MNEFKEVNEV KEVNDFNEFN SGDLQHSDED FDNEFDNDTL PSIPGKKGRK LGAKYSLIPQ GSQNIDINMN KRKRQAPLPF NSSVNNAIAS SSKVTSRTRP PKADPYRPQI PAPDFAKPDY SHVEELFEPF IKKQLELQDQ GQTPPPVKFP VNQRPDYVVS SAPRIPQNYI VPVPLDTHSK SNYKTRRWSE HTKHIRSLSG STLRLKSWLG SQHSEYSNRP PPLIPTTTTN SNQGFEESIN PANIITPSGV PLNKLDKRTR EYKMIMAQHK SQLEQKRMDQ QRQKIDDNHQ SGVGGLANSG GVDSGANSVD NTVDNIVDSV IEKKEDDDTV DIADNSETVD NADNLETANN VYNPEKTEIS VFYLDDLPVC FPYDRIYPEQ YSYMRDLKKT LDAGGHCVLE MPSGTGKTVS LLSLIVAYQQ HYDADRKLVY CSRTVPEIEK ALAELKRLMA YRADQGYAAK DSGYTGLGLS SRKNLCLHPS ISQERRGKAV DARCRDLTSA HAVQRGRDDP SSHELCSYHE NLSELAPGEI IPPGIWTIED VRKFGQQKGL CPYFSVRRMV QFCNTIIYSF HYLLDPKVAE MVSREMSKDA IVVFDEAHNI DNVCIESLSI DLTRPMLESA SRSVDRLSDK ISEAKQNDAQ RLQDEYAKLV EGMQDSDAPP PNDEMAMIRR QEEDVLSNPV LPDDLLKEAI PGNIRKAEHF IAFLKRFVEY LKTRMRVLHV VAETPLSFLQ HLRDITFIER KPLRFCSDRL SNLIKTLELE RLDEYSSLQS VAAFATLVST YEKGFLLILE PFETETATIP NPIFHLTCQD ASIAIAPVFD RFSSVIITSG TISPLDMYPK MLNFNAIVQE SYPMTLSRNC FIPMVITRGS DQVAVSSRFE VRNDPAVVRN YGQMLIEYSK VIPDGIVAFF PSYLYMESIV SAWNEMQILD EVWKHKLIFV ETPDAPETSI ALENFRKACD NGRGAVMLSV ARGKVSEGID FDHHFGRAVI MFGVPYQYTE SRILKARLEY LRDNHRIRES DFLTFDAMRH AAQCVGRVLR GKSDYGLMIF ADKRFARSDK RAKLPRWINQ YIAETSSNLS TDMAISLAKR FVRTMAQPFD HSQTGVSLWT MDHVLERQRL DKESDLAAVA LTDKDHMNVD GVVDGVADGV GDSSGDSDID DTGGIDDNAL IDIPMTQ // ID R9PA18_PSEHS Unreviewed; 849 AA. AC R9PA18; DT 24-JUL-2013, integrated into UniProtKB/TrEMBL. DT 24-JUL-2013, sequence version 1. DT 11-MAY-2016, entry version 19. DE SubName: Full=DNA repair helicase {ECO:0000313|EMBL:GAC98199.1}; GN ORFNames=PHSY_005788 {ECO:0000313|EMBL:GAC98199.1}; OS Pseudozyma hubeiensis (strain SY62) (Yeast). OC Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; OC Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Pseudozyma. OX NCBI_TaxID=1305764 {ECO:0000313|EMBL:GAC98199.1, ECO:0000313|Proteomes:UP000014071}; RN [1] {ECO:0000313|Proteomes:UP000014071} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=SY62 {ECO:0000313|Proteomes:UP000014071}; RX PubMed=23814110; DOI=10.1128/genomeA.00409-13; RA Konishi M., Hatada Y., Horiuchi J.; RT "Draft genome sequence of the basidiomycetous yeast-like fungus RT Pseudozyma hubeiensis SY62, which produces an abundant amount of the RT biosurfactant mannosylerythritol lipids."; RL Genome Announc. 1:E0040913-E0040913(2013). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; DF238816; GAC98199.1; -; Genomic_DNA. DR RefSeq; XP_012191786.1; XM_012336396.1. DR EnsemblFungi; GAC98199; GAC98199; PHSY_005788. DR GeneID; 24111065; -. DR Proteomes; UP000014071; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:GAC98199.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000014071}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:GAC98199.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:GAC98199.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:GAC98199.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000014071}. FT DOMAIN 7 319 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 849 AA; 96456 MW; 68D607D0837ABC66 CRC64; MKFYIDELPV LFPYPKIYPE QYAYMTDLKR TLDANGHCVL EMPSGTGKTV SLLSLIVSYQ LFHPAKRKLI YCSRTVPEIE KALAELKRLM EYRARYNVKE GEDSEVLKNE AEGSNGPGEQ DSEMKGRGKA GAQMEDILAL GLSSRKNLCI HPDVSRERKG KVVDARCRDM TSSWACEKGR QDPGSVELCD FHEELGKMEP GQLIPQGVWT LEEVKEYARD KGICPYFAIR RMMPFVDIVI YSFHYLLDPK VAEQVSKEMS KDAIVVFDEA HNIDNVCIES LSIDLTRPML DSAYRSINQL SDRVDEIKKT DASKLQDEYA RLVEGLQEQG EQREAESFMA NPVLPDDLLS EAVPGNIRRA EHFVAFLKRF VEYLKTRMRV LHVVAETPAS FLQHLKDITY IERKPLRFCA ERLRMLVGTL ELTRLDEFSA LQKVASFATL VATYDKGFLL ILEPFETENA TVPNPIFHFT CLDASLAIAP VFERFSSVII TSGTISPLDM YPKMLKFDAI VQESYAMTLT RQCFLPLVIT RGSDQVAISS RFEVRNDPAV VRNYGSILIE YAKCVPDGIV AFFPSYLYME SIVAAWHDMG ILDEVWKYKL IFIETPDAPE TSIALENYRR ACDNGRGAIL LSVARGKVSE GIDFDHNYGR AVIMFGVPYQ YTESRILKAR LEFLRDNFRI RENDFLTFDA MRHAAQCVGR VLRGKTDYGL MVFADKRFAR ADKRNKLPKW IAQYIKETHS NLSTDMAIVE SKLFIRSMAQ PYPEGKNGVS LWELADIESR QAKERETFAK LMGGQLKVDA NGEVVDKDDS DSDMEGADVG KQEDDFDKEF GGGDDLAQIN ELDEVMQDA // ID R9T8B5_9EURY Unreviewed; 628 AA. AC R9T8B5; DT 18-SEP-2013, integrated into UniProtKB/TrEMBL. DT 18-SEP-2013, sequence version 1. DT 11-MAY-2016, entry version 20. DE SubName: Full=DNA repair helicase Rad3 {ECO:0000313|EMBL:AGN25593.1}; GN ORFNames=MMINT_01910 {ECO:0000313|EMBL:AGN25593.1}; OS Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1. OC Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; OC Methanomassiliicoccaceae; Methanomassiliicoccus. OX NCBI_TaxID=1295009 {ECO:0000313|EMBL:AGN25593.1, ECO:0000313|Proteomes:UP000014070}; RN [1] {ECO:0000313|EMBL:AGN25593.1, ECO:0000313|Proteomes:UP000014070} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Issoire-Mx1 {ECO:0000313|EMBL:AGN25593.1}; RX PubMed=23846268; DOI=10.1128/genomeA.00453-13; RA Borrel G., Harris H.M., Parisot N., Gaci N., Tottey W., RA Mihajlovski A., Deane J., Gribaldo S., Bardot O., Peyretaillade E., RA Peyret P., O'Toole P.W., Brugere J.F.; RT "Genome Sequence of "Candidatus Methanomassiliicoccus intestinalis" RT Issoire-Mx1, a Third Thermoplasmatales-Related Methanogenic Archaeon RT from Human Feces."; RL Genome Announc. 1:142-142(2013). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP005934; AGN25593.1; -; Genomic_DNA. DR RefSeq; WP_020448118.1; NC_021353.1. DR EnsemblBacteria; AGN25593; AGN25593; MMINT_01910. DR GeneID; 16155099; -. DR KEGG; mer:MMINT_01910; -. DR KO; K10844; -. DR Proteomes; UP000014070; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR014001; Helicase_ATP-bd. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00487; DEXDc; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000313|EMBL:AGN25593.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000014070}; KW Helicase {ECO:0000313|EMBL:AGN25593.1}; KW Hydrolase {ECO:0000313|EMBL:AGN25593.1}; KW Nucleotide-binding {ECO:0000313|EMBL:AGN25593.1}; KW Reference proteome {ECO:0000313|Proteomes:UP000014070}. FT DOMAIN 1 271 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 628 AA; 71327 MW; F979AEBAD9350417 CRC64; MGLFPYKFRK FQEELVESIA DSTSSASHLV LESGTGTGKT VCALAGTLDT ALKNDKKVLY LTRTNSQQHQ VMTELRKINE ITPVFGVAIQ GRQNTCPLVQ RDPDLRSGTP EELSKLCAEK KARAISDSEG GCRFYRKTIT SDFEDVEKYC RENLPSVEEF SDYCDKRGMC PHELTKDLLS RATVVAAPYV YFFSPYIRQR LLDWMNISET DLIVIVDEAH NLPEYAREIK SFKLSSKVIE LVNKELDDFG NPEVLKGITV RDFVKQIDIL LNKAQEEYLI EDDGIIPPDF LEAGLMSAFF ITSHALDAAA ENISEFGDTI RDAKRKKGRL PRSYIYSLGN FLQLWADTYE EFYVKLITGG ENPAFEAYCM DPSVACLPVF SCYSSLHMSG TLSPLNEYRA SIGIPKESRS IIFPSPFDPS KRSVIYTDDV TTKYEELLKD EEIIKKMEDY TVSVCNTCNK NTAVFFSSYT LMNKFLEDKI LLRIHNDVFM ERKGMQQHEL MNEVKSFKSS KPAVLFAVMG GRISEGIDFP GDELEIEILE GIPYPKPNAK QRALLHYYEI KFGRGWEYTV KAPVTRRLLQ TLGRLIRTED DAGIALILDK RAVQFSDRFV SHLSEAPVND ILNFFAGR // ID RAD15_SCHPO Reviewed; 772 AA. AC P26659; DT 01-AUG-1992, integrated into UniProtKB/Swiss-Prot. DT 01-OCT-1996, sequence version 2. DT 13-APR-2016, entry version 133. DE RecName: Full=DNA repair helicase rad15 {ECO:0000303|PubMed:1319571}; DE EC=3.6.4.12; DE AltName: Full=DNA repair helicase RAD3 homolog {ECO:0000305|PubMed:1534406}; DE AltName: Full=Protein rhp3 {ECO:0000303|PubMed:1534406}; GN Name=rad15 {ECO:0000303|PubMed:1319571}; GN Synonyms=rad5 {ECO:0000303|PubMed:8960127}, GN rhp3 {ECO:0000303|PubMed:1534406}; GN ORFNames=SPAC1D4.12 {ECO:0000312|PomBase:SPAC1D4.12}; OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast). OC Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; OC Schizosaccharomycetes; Schizosaccharomycetales; OC Schizosaccharomycetaceae; Schizosaccharomyces. OX NCBI_TaxID=284812; RN [1] RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND FUNCTION. RX PubMed=1534406; DOI=10.1093/nar/20.9.2327; RA Reynolds P.R., Biggar S., Prakash L., Prakash S.; RT "The Schizosaccharomyces pombe rhp3+ gene required for DNA repair and RT cell viability is functionally interchangeable with the RAD3 gene of RT Saccharomyces cerevisiae."; RL Nucleic Acids Res. 20:2327-2334(1992). RN [2] RP NUCLEOTIDE SEQUENCE [GENOMIC DNA]. RX PubMed=1319571; DOI=10.1093/nar/20.11.2673; RA Murray J.M., Doe C., Schenk P., Carr A.M., Lehmann A.R., Watts F.Z.; RT "Cloning and characterisation of the S. pombe rad15 gene, a homologue RT to the S. cerevisiae RAD3 and human ERCC2 genes."; RL Nucleic Acids Res. 20:2673-2678(1992). RN [3] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=972 / ATCC 24843; RX PubMed=11859360; DOI=10.1038/nature724; RA Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A., RA Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S., RA Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., RA Collins M., Connor R., Cronin A., Davis P., Feltwell T., Fraser A., RA Gentles S., Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., RA Holroyd S., Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., RA James K.D., Jones L., Jones M., Leather S., McDonald S., McLean J., RA Mooney P., Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., RA Oliver K., O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., RA Rutherford K.M., Rutter S., Saunders D., Seeger K., Sharp S., RA Skelton J., Simmonds M.N., Squares R., Squares S., Stevens K., RA Taylor K., Taylor R.G., Tivey A., Walsh S.V., Warren T., Whitehead S., RA Woodward J.R., Volckaert G., Aert R., Robben J., Grymonprez B., RA Weltjens I., Vanstreels E., Rieger M., Schaefer M., Mueller-Auer S., RA Gabel C., Fuchs M., Duesterhoeft A., Fritzc C., Holzer E., Moestl D., RA Hilbert H., Borzym K., Langer I., Beck A., Lehrach H., Reinhardt R., RA Pohl T.M., Eger P., Zimmermann W., Wedler H., Wambutt R., Purnelle B., RA Goffeau A., Cadieu E., Dreano S., Gloux S., Lelaure V., Mottier S., RA Galibert F., Aves S.J., Xiang Z., Hunt C., Moore K., Hurst S.M., RA Lucas M., Rochet M., Gaillardin C., Tallada V.A., Garzon A., Thode G., RA Daga R.R., Cruzado L., Jimenez J., Sanchez M., del Rey F., Benito J., RA Dominguez A., Revuelta J.L., Moreno S., Armstrong J., Forsburg S.L., RA Cerutti L., Lowe T., McCombie W.R., Paulsen I., Potashkin J., RA Shpakovski G.V., Ussery D., Barrell B.G., Nurse P.; RT "The genome sequence of Schizosaccharomyces pombe."; RL Nature 415:871-880(2002). RN [4] RP FUNCTION. RX PubMed=8960127; RA Fortunato E.A., Osman F., Subramani S.; RT "Analysis of spontaneous and double-strand break-induced recombination RT in rad mutants of S. pombe."; RL Mutat. Res. 364:14-60(1996). RN [5] RP SUBUNIT. RX PubMed=14534314; DOI=10.1074/jbc.M306750200; RA Spaehr H., Khorosjutina O., Baraznenok V., Linder T., Samuelsen C.O., RA Hermand D., Maekelae T.P., Holmberg S., Gustafsson C.M.; RT "Mediator influences Schizosaccharomyces pombe RNA polymerase II- RT dependent transcription in vitro."; RL J. Biol. Chem. 278:51301-51306(2003). RN [6] RP SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS]. RX PubMed=16823372; DOI=10.1038/nbt1222; RA Matsuyama A., Arai R., Yashiroda Y., Shirai A., Kamata A., Sekido S., RA Kobayashi Y., Hashimoto A., Hamamoto M., Hiraoka Y., Horinouchi S., RA Yoshida M.; RT "ORFeome cloning and global analysis of protein localization in the RT fission yeast Schizosaccharomyces pombe."; RL Nat. Biotechnol. 24:841-847(2006). CC -!- FUNCTION: ATP-dependent DNA helicase involved in excision repair CC of DNA damaged with UV light, bulky adducts, or cross-linking CC agents (PubMed:1534406, PubMed:8960127). Necessary for excision of CC pyrimidine dimers. Also unwinds DNA/RNA duplexes. Plays an CC essential role in the cell viability (By similarity). CC {ECO:0000250|UniProtKB:P06839, ECO:0000269|PubMed:1534406, CC ECO:0000269|PubMed:8960127}. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000250|UniProtKB:P06839}. CC -!- COFACTOR: CC Name=[4Fe-4S] cluster; Xref=ChEBI:CHEBI:49883; CC Evidence={ECO:0000250|UniProtKB:P06839}; CC Note=Binds 1 [4Fe-4S] cluster. {ECO:0000250|UniProtKB:P06839}; CC -!- SUBUNIT: One of the nine subunits forming the core-TFIIH basal CC transcription factor. {ECO:0000269|PubMed:14534314}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:16823372}. CC -!- SIMILARITY: Belongs to the helicase family. RAD3/XPD subfamily. CC {ECO:0000305}. CC -!- SIMILARITY: Contains 1 helicase ATP-binding domain. CC {ECO:0000255|PROSITE-ProRule:PRU00541}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; X64583; CAA45870.1; -; Genomic_DNA. DR EMBL; X60499; CAA43022.1; -; Genomic_DNA. DR EMBL; CU329670; CAA93221.1; -; Genomic_DNA. DR PIR; S22660; S22660. DR RefSeq; NP_593025.1; NM_001018424.2. DR ProteinModelPortal; P26659; -. DR IntAct; P26659; 1. DR MINT; MINT-4687938; -. DR MaxQB; P26659; -. DR EnsemblFungi; SPAC1D4.12.1; SPAC1D4.12.1:pep; SPAC1D4.12. DR GeneID; 2542203; -. DR KEGG; spo:SPAC1D4.12; -. DR EuPathDB; FungiDB:SPAC1D4.12; -. DR PomBase; SPAC1D4.12; rad15. DR HOGENOM; HOG000205390; -. DR InParanoid; P26659; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG7BKD38; -. DR PhylomeDB; P26659; -. DR Reactome; R-SPO-113418; Formation of the Early Elongation Complex. DR Reactome; R-SPO-5696395; Formation of Incision Complex in GG-NER. DR Reactome; R-SPO-5696400; Dual Incision in GG-NER. DR Reactome; R-SPO-674695; RNA Polymerase II Pre-transcription Events. DR Reactome; R-SPO-6781823; Formation of TC-NER Pre-Incision Complex. DR Reactome; R-SPO-6782135; Dual incision in TC-NER. DR Reactome; R-SPO-6782210; Gap-filling DNA repair synthesis and ligation in TC-NER. DR Reactome; R-SPO-72086; mRNA Capping. DR Reactome; R-SPO-73776; RNA Polymerase II Promoter Escape. DR Reactome; R-SPO-73779; RNA Polymerase II Transcription Pre-Initiation And Promoter Opening. DR Reactome; R-SPO-75953; RNA Polymerase II Transcription Initiation. DR Reactome; R-SPO-76042; RNA Polymerase II Transcription Initiation And Promoter Clearance. DR Reactome; R-SPO-77075; RNA Pol II CTD phosphorylation and interaction with CE. DR NextBio; 20803273; -. DR PRO; PR:P26659; -. DR Proteomes; UP000002485; Chromosome I. DR GO; GO:0000439; C:core TFIIH complex; ISO:PomBase. DR GO; GO:0005829; C:cytosol; IDA:PomBase. DR GO; GO:0005675; C:holo TFIIH complex; ISO:PomBase. DR GO; GO:0000112; C:nucleotide-excision repair factor 3 complex; IGI:PomBase. DR GO; GO:0005634; C:nucleus; IDA:PomBase. DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IC:PomBase. DR GO; GO:0043141; F:ATP-dependent 5'-3' DNA helicase activity; ISO:PomBase. DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW. DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. DR GO; GO:0000991; F:transcription factor activity, core RNA polymerase II binding; ISO:PomBase. DR GO; GO:0000717; P:nucleotide-excision repair, DNA duplex unwinding; IGI:PomBase. DR GO; GO:0006357; P:regulation of transcription from RNA polymerase II promoter; ISO:GOC. DR GO; GO:0006367; P:transcription initiation from RNA polymerase II promoter; ISO:PomBase. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 1: Evidence at protein level; KW 4Fe-4S; ATP-binding; Complete proteome; DNA damage; DNA repair; KW DNA-binding; Helicase; Hydrolase; Iron; Iron-sulfur; Metal-binding; KW Nucleotide-binding; Nucleus; Reference proteome. FT CHAIN 1 772 DNA repair helicase rad15. FT /FTId=PRO_0000101984. FT DOMAIN 7 283 Helicase ATP-binding. FT {ECO:0000255|PROSITE-ProRule:PRU00541}. FT NP_BIND 42 49 ATP. {ECO:0000255|PROSITE- FT ProRule:PRU00541}. FT MOTIF 233 236 DEAH box. FT METAL 115 115 Iron-sulfur (4Fe-4S). FT {ECO:0000250|UniProtKB:P06839}. FT METAL 133 133 Iron-sulfur (4Fe-4S). FT {ECO:0000250|UniProtKB:P06839}. FT METAL 154 154 Iron-sulfur (4Fe-4S). FT {ECO:0000250|UniProtKB:P06839}. FT METAL 189 189 Iron-sulfur (4Fe-4S). FT {ECO:0000250|UniProtKB:P06839}. FT CONFLICT 225 225 S -> N (in Ref. 1; CAA45870). FT {ECO:0000305}. FT CONFLICT 588 588 S -> T (in Ref. 2; CAA43022). FT {ECO:0000305}. SQ SEQUENCE 772 AA; 88149 MW; A21025C298A28F08 CRC64; MKFYIDDLPI LFPYPRIYPE QYQYMCDLKH SLDAGGIALL EMPSGTGKTI SLLSLIVSYQ QHYPEHRKLI YCSRTMSEID KALAELKRLM AYRTSQLGYE EPFLGLGLTS RKNLCLHPSV RREKNGNVVD ARCRSLTAGF VREQRLAGMD VPTCEFHDNL EDLEPHSLIS NGVWTLDDIT EYGEKTTRCP YFTVRRMLPF CNVIIYSYHY LLDPKIAERV SRELSKDCIV VFDEAHNIDN VCIESLSIDL TESSLRKASK SILSLEQKVN EVKQSDSKKL QDEYQKLVRG LQDANAANDE DQFMANPVLP EDVLKEAVPG NIRRAEHFIA FLKRFVEYLK TRMKVLHVIA ETPTSFLQHV KDITFIDKKP LRFCAERLTS LVRALQISLV EDFHSLQQVV AFATLVATYE RGFILILEPF ETENATVPNP ILRFSCLDAS IAIKPVFERF RSVIITSGTL SPLDMYPKML QFNTVMQESY GMSLARNCFL PMVVTRGSDQ VAISSKFEAR NDPSVVRNYG NILVEFSKIT PDGLVAFFPS YLYLESIVSS WQSMGILDEV WKYKLILVET PDPHETTLAL ETYRAACSNG RGAVLLSVAR GKVSEGVDFD HHYGRAVIMF GIPYQYTESR VLKARLEFLR DTYQIREADF LTFDAMRHAA QCLGRVLRGK DDHGIMVLAD KRYGRSDKRT KLPKWIQQYI TEGATNLSTD MSLALAKKFL RTMAQPFTAS DQEGISWWSL DDLLIHQKKA LKSAAIEQSK HEDEMDIDVV ET // ID RAD3_YEAST Reviewed; 778 AA. AC P06839; D3DM79; DT 01-JAN-1988, integrated into UniProtKB/Swiss-Prot. DT 01-JAN-1988, sequence version 1. DT 11-MAY-2016, entry version 167. DE RecName: Full=DNA repair helicase RAD3; DE EC=3.6.4.12; DE AltName: Full=General transcription and DNA repair factor IIH subunit RAD3; DE Short=TFIIH subunit RAD3; GN Name=RAD3; Synonyms=REM1; OrderedLocusNames=YER171W; OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast). OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; OC Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces. OX NCBI_TaxID=559292; RN [1] RP NUCLEOTIDE SEQUENCE [GENOMIC DNA]. RX PubMed=2987851; DOI=10.1093/nar/13.7.2357; RA Reynolds P., Higgins D.R., Prakash L., Prakash S.; RT "The nucleotide sequence of the RAD3 gene of Saccharomyces cerevisiae: RT a potential adenine nucleotide binding amino acid sequence and a RT nonessential acidic carboxyl terminal region."; RL Nucleic Acids Res. 13:2357-2372(1985). RN [2] RP NUCLEOTIDE SEQUENCE [GENOMIC DNA]. RX PubMed=3885009; RA Naumovski L., Chu G., Berg P., Friedberg E.C.; RT "RAD3 gene of Saccharomyces cerevisiae: nucleotide sequence of wild- RT type and mutant alleles, transcript mapping, and aspects of gene RT regulation."; RL Mol. Cell. Biol. 5:17-26(1985). RN [3] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 204508 / S288c; RX PubMed=9169868; RA Dietrich F.S., Mulligan J.T., Hennessy K.M., Yelton M.A., Allen E., RA Araujo R., Aviles E., Berno A., Brennan T., Carpenter J., Chen E., RA Cherry J.M., Chung E., Duncan M., Guzman E., Hartzell G., RA Hunicke-Smith S., Hyman R.W., Kayser A., Komp C., Lashkari D., Lew H., RA Lin D., Mosedale D., Nakahara K., Namath A., Norgren R., Oefner P., RA Oh C., Petel F.X., Roberts D., Sehl P., Schramm S., Shogren T., RA Smith V., Taylor P., Wei Y., Botstein D., Davis R.W.; RT "The nucleotide sequence of Saccharomyces cerevisiae chromosome V."; RL Nature 387:78-81(1997). RN [4] RP GENOME REANNOTATION. RC STRAIN=ATCC 204508 / S288c; RX PubMed=24374639; DOI=10.1534/g3.113.008995; RA Engel S.R., Dietrich F.S., Fisk D.G., Binkley G., Balakrishnan R., RA Costanzo M.C., Dwight S.S., Hitz B.C., Karra K., Nash R.S., Weng S., RA Wong E.D., Lloyd P., Skrzypek M.S., Miyasato S.R., Simison M., RA Cherry J.M.; RT "The reference genome sequence of Saccharomyces cerevisiae: Then and RT now."; RL G3 (Bethesda) 4:389-398(2014). RN [5] RP PROTEIN SEQUENCE OF 1-10. RX PubMed=8269516; DOI=10.1016/0092-8674(93)90624-Y; RA Feaver W.J., Svejstrup J.Q., Bardwell L., Bardwell A.J., RA Buratowski S., Gulyas K.D., Donahue T.F., Friedberg E.C., RA Kornberg R.D.; RT "Dual roles of a multiprotein complex from S. cerevisiae in RT transcription and DNA repair."; RL Cell 75:1379-1387(1993). RN [6] RP MUTAGENESIS OF LYS-48. RX PubMed=2846277; RA Sung P., Higgins D., Prakash L., Prakash S.; RT "Mutation of lysine-48 to arginine in the yeast RAD3 protein abolishes RT its ATPase and DNA helicase activities but not the ability to bind RT ATP."; RL EMBO J. 7:3263-3269(1988). RN [7] RP MUTAGENESIS OF LYS-48. RX PubMed=1719538; DOI=10.1073/pnas.88.21.9712; RA Bailly V., Sung P., Prakash L., Prakash S.; RT "DNA.RNA helicase activity of RAD3 protein of Saccharomyces RT cerevisiae."; RL Proc. Natl. Acad. Sci. U.S.A. 88:9712-9716(1991). RN [8] RP MUTANTS. RX PubMed=2174856; RA Song J.M., Montelone B.A., Siede W., Friedberg E.C.; RT "Effects of multiple yeast rad3 mutant alleles on UV sensitivity, RT mutability, and mitotic recombination."; RL J. Bacteriol. 172:6620-6630(1990). RN [9] RP PRESENCE OF A DEAH MOTIF. RX PubMed=1956796; DOI=10.1093/nar/19.22.6331; RA Harosh I., Deschavanne P.J.; RT "The RAD3 gene is a member of the DEAH family RNA helicase-like RT protein."; RL Nucleic Acids Res. 19:6331-6331(1991). RN [10] RP FUNCTION OF TFIIH IN RNA POLYMERASE II TRANSCRIPTION, AND RP IDENTIFICATION IN THE TFIIH COMPLEX. RX PubMed=7961739; RA Svejstrup J.Q., Feaver W.J., LaPointe J., Kornberg R.D.; RT "RNA polymerase transcription factor IIH holoenzyme from yeast."; RL J. Biol. Chem. 269:28044-28048(1994). RN [11] RP FUNCTION OF THE TFIIH CORE COMPLEX IN DNA REPAIR. RX PubMed=8631896; DOI=10.1074/jbc.271.18.10821; RA Sung P., Guzder S.N., Prakash L., Prakash S.; RT "Reconstitution of TFIIH and requirement of its DNA helicase subunits, RT Rad3 and Rad25, in the incision step of nucleotide excision repair."; RL J. Biol. Chem. 271:10821-10826(1996). RN [12] RP IDENTIFICATION IN THE TFIIH CORE COMPLEX. RX PubMed=14500720; DOI=10.1074/jbc.C300417200; RA Takagi Y., Komori H., Chang W.-H., Hudmon A., Erdjument-Bromage H., RA Tempst P., Kornberg R.D.; RT "Revised subunit structure of yeast transcription factor IIH (TFIIH) RT and reconciliation with human TFIIH."; RL J. Biol. Chem. 278:43897-43900(2003). RN [13] RP REVIEW. RX PubMed=8387143; DOI=10.1111/j.1365-2958.1993.tb01173.x; RA Deschavanne P.J., Harosh I.; RT "The Rad3 protein from Saccharomyces cerevisiae: a DNA and DNA:RNA RT helicase with putative RNA helicase activity."; RL Mol. Microbiol. 7:831-835(1993). RN [14] RP LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS]. RX PubMed=14562106; DOI=10.1038/nature02046; RA Ghaemmaghami S., Huh W.-K., Bower K., Howson R.W., Belle A., RA Dephoure N., O'Shea E.K., Weissman J.S.; RT "Global analysis of protein expression in yeast."; RL Nature 425:737-741(2003). RN [15] RP COFACTOR, IRON-SULFUR-BINDING, AND MUTAGENESIS OF LYS-48; ARG-111 AND RP CYS-115. RX PubMed=16973432; DOI=10.1016/j.molcel.2006.07.019; RA Rudolf J., Makrantoni V., Ingledew W.J., Stark M.J., White M.F.; RT "The DNA repair helicases XPD and FancJ have essential iron-sulfur RT domains."; RL Mol. Cell 23:801-808(2006). CC -!- FUNCTION: ATP-dependent DNA helicase involved in excision repair CC of DNA damaged with UV light, bulky adducts, or cross-linking CC agents. Necessary for excision of pyrimidine dimers. Also unwinds CC DNA/RNA duplexes. Plays an essential role in the cell viability. CC Involved in the maintenance of the fidelity of DNA replication. CC Acts as component of the general transcription and DNA repair CC factor IIH (TFIIH) core, which is essential for both basal and CC activated transcription, and is involved in nucleotide excision CC repair (NER) of damaged DNA. TFIIH has CTD kinase and DNA- CC dependent ATPase activity, and is essential for polymerase II CC transcription in vitro. {ECO:0000269|PubMed:7961739, CC ECO:0000269|PubMed:8631896}. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC -!- COFACTOR: CC Name=[4Fe-4S] cluster; Xref=ChEBI:CHEBI:49883; CC Evidence={ECO:0000305|PubMed:16973432}; CC Note=Binds 1 [4Fe-4S] cluster. {ECO:0000305|PubMed:16973432}; CC -!- SUBUNIT: Component of the TFIIH core complex, which is composed of CC RAD3, SSL1, SSL2, TFB1, TFB2, TFB4 and TFB5. CC {ECO:0000269|PubMed:14500720, ECO:0000269|PubMed:7961739}. CC -!- SUBCELLULAR LOCATION: Nucleus. CC -!- MISCELLANEOUS: Present with 14400 molecules/cell in log phase SD CC medium. {ECO:0000269|PubMed:14562106}. CC -!- SIMILARITY: Belongs to the helicase family. RAD3/XPD subfamily. CC {ECO:0000305}. CC -!- SIMILARITY: Contains 1 helicase ATP-binding domain. CC {ECO:0000255|PROSITE-ProRule:PRU00541}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; X02368; CAA26215.1; -; Genomic_DNA. DR EMBL; K03293; AAA34943.1; -; Genomic_DNA. DR EMBL; U18922; AAB64698.1; -; Genomic_DNA. DR EMBL; BK006939; DAA07833.1; -; Genomic_DNA. DR PIR; A23308; A23308. DR RefSeq; NP_011098.3; NM_001179061.3. DR PDB; 5FMF; EM; 6.00 A; Y=1-778. DR PDBsum; 5FMF; -. DR ProteinModelPortal; P06839; -. DR SMR; P06839; 455-686. DR BioGrid; 36924; 166. DR DIP; DIP-2425N; -. DR IntAct; P06839; 28. DR MINT; MINT-617451; -. DR MaxQB; P06839; -. DR PeptideAtlas; P06839; -. DR EnsemblFungi; YER171W; YER171W; YER171W. DR GeneID; 856918; -. DR KEGG; sce:YER171W; -. DR EuPathDB; FungiDB:YER171W; -. DR SGD; S000000973; RAD3. DR GeneTree; ENSGT00550000075092; -. DR HOGENOM; HOG000205390; -. DR InParanoid; P06839; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR OrthoDB; EOG7BKD38; -. DR BioCyc; YEAST:G3O-30331-MONOMER; -. DR Reactome; R-SCE-113418; Formation of the Early Elongation Complex. DR Reactome; R-SCE-5696395; Formation of Incision Complex in GG-NER. DR Reactome; R-SCE-5696400; Dual Incision in GG-NER. DR Reactome; R-SCE-674695; RNA Polymerase II Pre-transcription Events. DR Reactome; R-SCE-6781823; Formation of TC-NER Pre-Incision Complex. DR Reactome; R-SCE-6782135; Dual incision in TC-NER. DR Reactome; R-SCE-6782210; Gap-filling DNA repair synthesis and ligation in TC-NER. DR Reactome; R-SCE-72086; mRNA Capping. DR Reactome; R-SCE-73776; RNA Polymerase II Promoter Escape. DR Reactome; R-SCE-73779; RNA Polymerase II Transcription Pre-Initiation And Promoter Opening. DR Reactome; R-SCE-75953; RNA Polymerase II Transcription Initiation. DR Reactome; R-SCE-76042; RNA Polymerase II Transcription Initiation And Promoter Clearance. DR Reactome; R-SCE-77075; RNA Pol II CTD phosphorylation and interaction with CE. DR NextBio; 983374; -. DR PRO; PR:P06839; -. DR Proteomes; UP000002311; Chromosome V. DR GO; GO:0000439; C:core TFIIH complex; IDA:SGD. DR GO; GO:0005829; C:cytosol; TAS:Reactome. DR GO; GO:0005675; C:holo TFIIH complex; IDA:SGD. DR GO; GO:0000112; C:nucleotide-excision repair factor 3 complex; IDA:SGD. DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IMP:UniProtKB. DR GO; GO:0043139; F:5'-3' DNA helicase activity; IMP:UniProtKB. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0043141; F:ATP-dependent 5'-3' DNA helicase activity; IDA:SGD. DR GO; GO:0003684; F:damaged DNA binding; IDA:SGD. DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. DR GO; GO:0032508; P:DNA duplex unwinding; IDA:GOC. DR GO; GO:0033683; P:nucleotide-excision repair, DNA incision; IDA:SGD. DR GO; GO:0070816; P:phosphorylation of RNA polymerase II C-terminal domain; IDA:SGD. DR GO; GO:0045951; P:positive regulation of mitotic recombination; IMP:SGD. DR GO; GO:0000019; P:regulation of mitotic recombination; IMP:SGD. DR GO; GO:0010525; P:regulation of transposition, RNA-mediated; IMP:SGD. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IDA:SGD. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 1: Evidence at protein level; KW 3D-structure; 4Fe-4S; ATP-binding; Complete proteome; KW Direct protein sequencing; DNA damage; DNA repair; DNA-binding; KW Helicase; Hydrolase; Iron; Iron-sulfur; Metal-binding; KW Nucleotide-binding; Nucleus; Reference proteome; Transcription; KW Transcription regulation. FT CHAIN 1 778 DNA repair helicase RAD3. FT /FTId=PRO_0000101983. FT DOMAIN 7 285 Helicase ATP-binding. FT {ECO:0000255|PROSITE-ProRule:PRU00541}. FT NP_BIND 42 49 ATP. {ECO:0000255|PROSITE- FT ProRule:PRU00541}. FT MOTIF 235 238 DEAH box. FT COMPBIAS 759 778 Asp/Glu-rich (acidic). FT METAL 115 115 Iron-sulfur (4Fe-4S). {ECO:0000250}. FT METAL 133 133 Iron-sulfur (4Fe-4S). {ECO:0000250}. FT METAL 156 156 Iron-sulfur (4Fe-4S). {ECO:0000250}. FT METAL 191 191 Iron-sulfur (4Fe-4S). {ECO:0000250}. FT MUTAGEN 48 48 K->R,A: Abolishes ATPase and DNA helicase FT activities but not ATP-binding capacity. FT {ECO:0000269|PubMed:16973432, FT ECO:0000269|PubMed:1719538, FT ECO:0000269|PubMed:2846277}. FT MUTAGEN 111 111 R->H: Confers an UV-sensitive phenotype. FT {ECO:0000269|PubMed:16973432}. FT MUTAGEN 115 115 C->S: Confers an UV-sensitive phenotype. FT {ECO:0000269|PubMed:16973432}. FT CONFLICT 2 2 K -> G (in Ref. 5; AA sequence). FT {ECO:0000305}. SQ SEQUENCE 778 AA; 89786 MW; 978BCA01751949B4 CRC64; MKFYIDDLPV LFPYPKIYPE QYNYMCDIKK TLDVGGNSIL EMPSGTGKTV SLLSLTIAYQ MHYPEHRKII YCSRTMSEIE KALVELENLM DYRTKELGYQ EDFRGLGLTS RKNLCLHPEV SKERKGTVVD EKCRRMTNGQ AKRKLEEDPE ANVELCEYHE NLYNIEVEDY LPKGVFSFEK LLKYCEEKTL CPYFIVRRMI SLCNIIIYSY HYLLDPKIAE RVSNEVSKDS IVIFDEAHNI DNVCIESLSL DLTTDALRRA TRGANALDER ISEVRKVDSQ KLQDEYEKLV QGLHSADILT DQEEPFVETP VLPQDLLTEA IPGNIRRAEH FVSFLKRLIE YLKTRMKVLH VISETPKSFL QHLKQLTFIE RKPLRFCSER LSLLVRTLEV TEVEDFTALK DIATFATLIS TYEEGFLLII EPYEIENAAV PNPIMRFTCL DASIAIKPVF ERFSSVIITS GTISPLDMYP RMLNFKTVLQ KSYAMTLAKK SFLPMIITKG SDQVAISSRF EIRNDPSIVR NYGSMLVEFA KITPDGMVVF FPSYLYMESI VSMWQTMGIL DEVWKHKLIL VETPDAQETS LALETYRKAC SNGRGAILLS VARGKVSEGI DFDHQYGRTV LMIGIPFQYT ESRILKARLE FMRENYRIRE NDFLSFDAMR HAAQCLGRVL RGKDDYGVMV LADRRFSRKR SQLPKWIAQG LSDADLNLST DMAISNTKQF LRTMAQPTDP KDQEGVSVWS YEDLIKHQNS RKDQGGFIEN ENKEGEQDED EDEDIEMQ // ID S0EGI5_GIBF5 Unreviewed; 786 AA. AC S0EGI5; DT 18-SEP-2013, integrated into UniProtKB/TrEMBL. DT 18-SEP-2013, sequence version 1. DT 11-MAY-2016, entry version 20. DE SubName: Full=Probable excision repair protein rhp3 {ECO:0000313|EMBL:CCT74116.1}; GN ORFNames=FFUJ_09754 {ECO:0000313|EMBL:CCT74116.1}; OS Gibberella fujikuroi (strain CBS 195.34 / IMI 58289 / NRRL A-6831) OS (Bakanae and foot rot disease fungus) (Fusarium fujikuroi). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; OC Sordariomycetes; Hypocreomycetidae; Hypocreales; Nectriaceae; OC Fusarium; Fusarium fujikuroi species complex. OX NCBI_TaxID=1279085 {ECO:0000313|EMBL:CCT74116.1, ECO:0000313|Proteomes:UP000016800}; RN [1] {ECO:0000313|Proteomes:UP000016800} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=CBS 195.34 / IMI 58289 / NRRL A-6831 RC {ECO:0000313|Proteomes:UP000016800}; RX PubMed=23825955; DOI=10.1371/journal.ppat.1003475; RA Wiemann P., Sieber C.M.K., von Bargen K.W., Studt L., Niehaus E.M., RA Espino J., Huss K., Michielse C., Albermann S., Wagner D., RA Bergner S.V., Connolly L.R., Fischer A., Reuter G., Kleigrewe K., RA Bald T., Wingfield B., Ophir R., Freeman S., Hippler M., Smith K.M., RA Brown D.W., Proctor R.H., Munsterkotter M., Freitag M., Humpf H.U., RA Guldener U., Tudzynski B.; RT "Deciphering the cryptic genome: genome-wide analyses of the rice RT pathogen Fusarium fujikuroi reveal complex regulation of secondary RT metabolism and novel metabolites."; RL PLoS Pathog. 9:E1003475-E1003475(2013). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; HF679031; CCT74116.1; -; Genomic_DNA. DR EnsemblFungi; CCT74116; CCT74116; FFUJ_09754. DR Proteomes; UP000016800; Chromosome 9. DR GO; GO:0000439; C:core TFIIH complex; IEA:EnsemblFungi. DR GO; GO:0005829; C:cytosol; IEA:EnsemblFungi. DR GO; GO:0005675; C:holo TFIIH complex; IEA:EnsemblFungi. DR GO; GO:0000112; C:nucleotide-excision repair factor 3 complex; IEA:EnsemblFungi. DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:EnsemblFungi. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0043141; F:ATP-dependent 5'-3' DNA helicase activity; IEA:EnsemblFungi. DR GO; GO:0003684; F:damaged DNA binding; IEA:EnsemblFungi. DR GO; GO:0000717; P:nucleotide-excision repair, DNA duplex unwinding; IEA:EnsemblFungi. DR GO; GO:0033683; P:nucleotide-excision repair, DNA incision; IEA:EnsemblFungi. DR GO; GO:0070816; P:phosphorylation of RNA polymerase II C-terminal domain; IEA:EnsemblFungi. DR GO; GO:0045951; P:positive regulation of mitotic recombination; IEA:EnsemblFungi. DR GO; GO:0010525; P:regulation of transposition, RNA-mediated; IEA:EnsemblFungi. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:EnsemblFungi. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000016800}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000016800}. FT DOMAIN 7 279 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 252 294 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 786 AA; 90734 MW; B89B8FD39FDCE8CE CRC64; MKFNIDDLPV LFPYPRIYPE QYAYMCDLKN AGGHCVLEMP SGTGKTVSLL SLIVAYQQYM PERRKLIYCS RTMSEIEKAL VELKSLMKYR AEQLGYEEEF RGLGLTSRKN LCLHPSVKRE KSGAIVDARC RSLTAGFVKE KKERGENVDV CVYHDNLDLL EPHNLIPNGV WSFDDMIRYG EEHKQCPYFT ARRMMQYCNV VIFSYHYLLD PKIAERVSKD FSKDCIVVFD EAHNIDNVCI ESLSTDITED SLRKATRGAQ NLENKISQMR DTDQQQLQNE YEKLVQGLRD ADEARQEDAF MANPALPEDL LKEAVPGNIR RAEHFIAFLK RFIEYLKTRM KVRQVISETP PSFLAHLREH TFIEKKPLRF CAERLTSLVR TLELTNIEDY QPLQEVATFA TLVATYEKGF LLILEPFESD TAEVPNPVLH FTCLDAAIAI KPVFDRFYSV IITSGTISPL EIYPKMLDFS TVIQESYAMT LARRSFMPMI VTRGSDQASV STSFQVRNEP SVVRNYGNLL TEFAKITPDG MVVFFPSYLY MESIISMWQG MGILDEVWKY KLILVETPDA QETSLALETY RTACCNGRGA VLLCVARGKV SEGIDFDHQY GRTVLCIGVP FQYTESRILK ARLQFLRETY RIKENDFLSF DAMRHAAQCL GRVLRGKDDY GIMVLADRRF QKKRSQLPKW INQGLQESDV NLSTDMAVSS ARRFLRTMAQ PFRAKDQEGI STWGYKDLME HKEKMDLERI KELEEEAQRP KPAAQDNNFE YDDDEFDQDM MEMDGF // ID S0K797_9ENTE Unreviewed; 833 AA. AC S0K797; DT 18-SEP-2013, integrated into UniProtKB/TrEMBL. DT 18-SEP-2013, sequence version 1. DT 11-MAY-2016, entry version 18. DE SubName: Full=Helicase {ECO:0000313|EMBL:EOU19428.1}; GN ORFNames=I571_02431 {ECO:0000313|EMBL:EOU19428.1}; OS Enterococcus durans ATCC 6056. OC Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; OC Enterococcus. OX NCBI_TaxID=1140001 {ECO:0000313|EMBL:EOU19428.1, ECO:0000313|Proteomes:UP000014199}; RN [1] {ECO:0000313|EMBL:EOU19428.1, ECO:0000313|Proteomes:UP000014199} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 6056 {ECO:0000313|EMBL:EOU19428.1, RC ECO:0000313|Proteomes:UP000014199}; RG The Broad Institute Genomics Platform; RG The Broad Institute Genome Sequencing Center for Infectious Disease; RA Earl A., Russ C., Gilmore M., Surin D., Walker B., Young S., Zeng Q., RA Gargeya S., Fitzgerald M., Haas B., Abouelleil A., Allen A.W., RA Alvarado L., Arachchi H.M., Berlin A.M., Chapman S.B., RA Gainer-Dewar J., Goldberg J., Griggs A., Gujja S., Hansen M., RA Howarth C., Imamovic A., Ireland A., Larimer J., McCowan C., RA Murphy C., Pearson M., Poon T.W., Priest M., Roberts A., Saif S., RA Shea T., Sisk P., Sykes S., Wortman J., Nusbaum C., Birren B.; RT "The Genome Sequence of Enterococcus durans ATCC_6056 (PacBio/Illumina RT hybrid assembly)."; RL Submitted (MAR-2013) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:EOU19428.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ASWM01000005; EOU19428.1; -; Genomic_DNA. DR EnsemblBacteria; EOU19428; EOU19428; I571_02431. DR Proteomes; UP000014199; Unassembled WGS sequence. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 4. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000313|EMBL:EOU19428.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000014199}; KW Helicase {ECO:0000313|EMBL:EOU19428.1}; KW Hydrolase {ECO:0000313|EMBL:EOU19428.1}; KW Nucleotide-binding {ECO:0000313|EMBL:EOU19428.1}. FT DOMAIN 230 481 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 833 AA; 97636 MW; A0A17632AC9616B2 CRC64; MLFNMYLLEL THPKIQILYP ISLPNQQGVF LYLCVTFFFQ VILYTKEAEW VKQSKISVRN LVEFILRRGS IDNRKKSNHT ALEGAKIHRK LQKEAGKTYE KEVFLKTTVE LEDIQLTIEG RADGIFQKDG LYYIDEIKTS EPRFEDLEQE QVDLFFHQAR VYAYIYCHKQ ELTEINLQLT YFQTTEEQIT RKTEYQTIEQ LDEFFKKLIA DYEEWLIFRE NWRTVRNASL MALKFPHDNY RKGQRELAVA AYKTIKTKQK LFAEAPTGTG KTVSTLFPTL KAIGEESGER VFYLTAKTIT RQVAEDAMIA FNDAGAEVKS VTLTAKDKIC FLDETTCNPD QCPYANGYYD RINEGLWDLL NHENQITREV IETYAKKHTL CPFELSLDVS LWCDVIIGDY NYLFDPTVYL RRFFEEEKNE DNIFLIDEAH NLVNRSREMY SAELSYRGAK NVYTIVPKKF KKLRRRINKL LKEFDKIQEL SNEDGWDYHH QKAPAESLIT AGYQLSEVIQ EWLAEYPEHA IQETILPFYF DLLHFLKISE FYDDHYETTV EKTYHDFVIK EFCIDPSLFL EQSLDKGRSS LLFSASFSPL SYYQETLGGK ESLAYRLPSP FPEENQQVLI ANYIETTYRK REESSPRLVE TINQFISGKT GNYFIFFPSY QYLDQTVAAF KERYPEVRVL IQETVMNETE REDFLANFKI DPAETLVAFC VLGGIFSEGI DLRGTRLIGS MIVGVGLPQM NHEQELIKEY YDEKDNLGFA YAYQLPGMNK VLQAAGRVIR DTTDEGIVVL ADRRFATRNY RQLFPNHWHQ AKNVNNINEL SSEIHRFWTT RKG // ID S0REC4_ENTAV Unreviewed; 780 AA. AC S0REC4; DT 18-SEP-2013, integrated into UniProtKB/TrEMBL. DT 18-SEP-2013, sequence version 1. DT 11-MAY-2016, entry version 16. DE SubName: Full=Helicase {ECO:0000313|EMBL:EOT45184.1}; GN ORFNames=OMU_02396 {ECO:0000313|EMBL:EOT45184.1}; OS Enterococcus avium ATCC 14025. OC Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; OC Enterococcus. OX NCBI_TaxID=1140002 {ECO:0000313|EMBL:EOT45184.1, ECO:0000313|Proteomes:UP000014104}; RN [1] {ECO:0000313|EMBL:EOT45184.1, ECO:0000313|Proteomes:UP000014104} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 14025 {ECO:0000313|EMBL:EOT45184.1, RC ECO:0000313|Proteomes:UP000014104}; RG The Broad Institute Genomics Platform; RG The Broad Institute Genome Sequencing Center for Infectious Disease; RA Earl A., Russ C., Gilmore M., Surin D., Walker B., Young S., Zeng Q., RA Gargeya S., Fitzgerald M., Haas B., Abouelleil A., Allen A.W., RA Alvarado L., Arachchi H.M., Berlin A.M., Chapman S.B., RA Gainer-Dewar J., Goldberg J., Griggs A., Gujja S., Hansen M., RA Howarth C., Imamovic A., Ireland A., Larimer J., McCowan C., RA Murphy C., Pearson M., Poon T.W., Priest M., Roberts A., Saif S., RA Shea T., Sisk P., Sykes S., Wortman J., Nusbaum C., Birren B.; RT "The Genome Sequence of Enterococcus avium ATCC_14025 (Illumina only RT assembly)."; RL Submitted (MAR-2013) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:EOT45184.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AHYV01000023; EOT45184.1; -; Genomic_DNA. DR RefSeq; WP_016180286.1; NZ_KE136509.1. DR EnsemblBacteria; EOT45184; EOT45184; OMU_02396. DR Proteomes; UP000014104; Unassembled WGS sequence. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR014001; Helicase_ATP-bd. DR InterPro; IPR001650; Helicase_C. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF00270; DEAD; 1. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00487; DEXDc; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. DR PROSITE; PS51194; HELICASE_CTER; 1. PE 4: Predicted; KW ATP-binding {ECO:0000313|EMBL:EOT45184.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000014104}; KW Helicase {ECO:0000313|EMBL:EOT45184.1}; KW Hydrolase {ECO:0000313|EMBL:EOT45184.1}; KW Nucleotide-binding {ECO:0000313|EMBL:EOT45184.1}; KW Reference proteome {ECO:0000313|Proteomes:UP000014104}. FT DOMAIN 180 434 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT DOMAIN 589 774 Helicase C-terminal. FT {ECO:0000259|PROSITE:PS51194}. SQ SEQUENCE 780 AA; 90983 MW; DD68E40D98085370 CRC64; MVVKKIAIRE LVEFILRRGS IDEGKNSNHT PQEGARIHRQ LQKEAGEGYQ KEVWLKKPLE IAETAVQIEG RADGIYLEDD KIIIDEIKTS ETPFEELETG IIDLYFYQAM VYAYIYSEQE ELTEIGTRLT YFQTTEEKIT RQLRTFSFEE LTDFFNDLIE RYENWLVFQM QWRETRNNSL KSLAFPFDTY RAGQRELAAA VYKTIHAQQK LYVEAPTGTG KTMSTLFPTF KAMGEELGER IFYLTAKTIT RQVAEETVTK ITKKDARVKS VTLTAKDKIC FLTERNCTPE HCPFAKGYYD RVNDGLWDML NNDDQYTRPV IEKYARKHEL CPFELSLDIS RFCDLVIGDY NYLFDPTVYL RRFFEEENKT NLVLVDEAHN LVNRSKEMYS ASISRENIAQ MQKDLDKSFK KLNRAFTRVD NEFELIHQSL EGKAYHHQQA APESLINSLF KLQEQIKEWL AENPDHPAQQ KMLPVYFEII RFTRMSEFYD DHYQTTVEHK SYDLIVKEYC IDPSWFLEQT MEKVGSSILF SASFSPLDYY QEVLGGGEDS LTYRLPSPFP NENRLVLVDA SIQTTYQMRT QSIPKIAASI ERLVKTKTGN YLVFFPSFQY LDQVADYFHD VYPEYAIQIQ GSKLNEAERE DFLAAFVDQP ERTLIGFCVL GGIFSEGIDL VGERLIGTVV VGVGLPQVNH EQELIKEYYD EKRNQGFSYA YQLPGMNKVI QAAGRVIRTM EDQGIILLLD QRYTNPHYQK LLPVSWSDRK IVYGATEVEH ASREFWQERE // ID S2IWA7_MUCC1 Unreviewed; 723 AA. AC S2IWA7; DT 18-SEP-2013, integrated into UniProtKB/TrEMBL. DT 18-SEP-2013, sequence version 1. DT 11-MAY-2016, entry version 17. DE SubName: Full=DNA repair helicase rad15 {ECO:0000313|EMBL:EPB81956.1}; GN ORFNames=HMPREF1544_11309 {ECO:0000313|EMBL:EPB81956.1}; OS Mucor circinelloides f. circinelloides (strain 1006PhL) (Mucormycosis OS agent) (Calyptromyces circinelloides). OC Eukaryota; Fungi; Fungi incertae sedis; Mucoromycotina; Mucorales; OC Mucorineae; Mucoraceae; Mucor. OX NCBI_TaxID=1220926 {ECO:0000313|EMBL:EPB81956.1, ECO:0000313|Proteomes:UP000014254}; RN [1] {ECO:0000313|Proteomes:UP000014254} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=1006PhL {ECO:0000313|Proteomes:UP000014254}; RG The Broad Institute Genomics Platform; RA Cuomo C., Earl A., Findley K., Lee S.C., Walker B., Young S., Zeng Q., RA Gargeya S., Fitzgerald M., Haas B., Abouelleil A., Allen A.W., RA Alvarado L., Arachchi H.M., Berlin A.M., Chapman S.B., RA Gainer-Dewar J., Goldberg J., Griggs A., Gujja S., Hansen M., RA Howarth C., Imamovic A., Ireland A., Larimer J., McCowan C., RA Murphy C., Pearson M., Poon T.W., Priest M., Roberts A., Saif S., RA Shea T., Sisk P., Sykes S., Wortman J., Nusbaum C., Birren B.; RT "The Genome sequence of Mucor circinelloides f. circinelloides RT 1006PhL."; RL Submitted (MAY-2013) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; KE124138; EPB81956.1; -; Genomic_DNA. DR EnsemblFungi; EPB81956; EPB81956; HMPREF1544_11309. DR Proteomes; UP000014254; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EPB81956.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000014254}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EPB81956.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EPB81956.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EPB81956.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000014254}. FT DOMAIN 1 259 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 723 AA; 82263 MW; 81CEC1F8B0D43436 CRC64; MCDLKKSLDA QGHCVLEMPS GTGKTVSLLS LIVAYQMQYP DQHRKFIYCS RTVPEIDKAL AELKNLMAYR QSQGLVEDFF GIGLTSRKNL CLNPKVSKEK KGKVVDSKCR NLTASWVRAK AGRHDVELCN FYETLESANS PNPIPNGVYT FEDLKAYGKE MQYCPYYLVR RAIPFANVVI YSYHYMLDPK VAELVSRELS RDCIVVFDEA HNIDNVCIES LSIDLTRPML DASARSVGVL ADRIEEIKKT DAQRLKNEYT KLVEGLRDAN TARDEDTFMA NPILPDDLLK EAVPGNIRRA EHFVAFLRRF IEYLKTRLRV MHVVAETPAS FLQHLKDVTY IERKPLRFCA ERLSSLVRTL ELTDLEHFSS LQKVASFATL TSTYDKGFLL ILEPFETETA TIPNPVLHFT CLDASIAIKP VFDRFSTVVI TSGTLSPLEM YPKMLNFQAV VQESYSMTLS RNCFLPMVIT RGSDQVAISS KFEVRNDPAV VRNFGQIMVE MSKIVPDGMV CFFPSYLYME SIVSMWNDMG ILNEAWKYKL IFVETPDAAE TSLALANYRK ACDNGRGAIL LSVARGKVSE GIDFDHNYGR AVIMFGIPYQ YTESRILKAR LEYLRDNLHI RENDFLTFDA MRHAAQCVGR VLRGKTDYGL MVFADKRFAR ADKRAKLPKW INQYVTDAST NLSTDMSLVI AKKFLRSMAQ PYESNQTGVS LWTVKDIEKH TSK // ID S3C4T3_OPHP1 Unreviewed; 794 AA. AC S3C4T3; DT 18-SEP-2013, integrated into UniProtKB/TrEMBL. DT 18-SEP-2013, sequence version 1. DT 11-MAY-2016, entry version 21. DE SubName: Full=Dna repair helicase rad3 {ECO:0000313|EMBL:EPE07802.1}; GN ORFNames=F503_00524 {ECO:0000313|EMBL:EPE07802.1}; OS Ophiostoma piceae (strain UAMH 11346) (Sap stain fungus). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; OC Sordariomycetes; Sordariomycetidae; Ophiostomatales; Ophiostomataceae; OC Ophiostoma. OX NCBI_TaxID=1262450 {ECO:0000313|EMBL:EPE07802.1, ECO:0000313|Proteomes:UP000016923}; RN [1] {ECO:0000313|EMBL:EPE07802.1, ECO:0000313|Proteomes:UP000016923} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=UAMH 11346 {ECO:0000313|EMBL:EPE07802.1, RC ECO:0000313|Proteomes:UP000016923}; RX PubMed=23725015; DOI=10.1186/1471-2164-14-373; RA Haridas S., Wang Y., Lim L., Massoumi Alamouti S., Jackman S., RA Docking R., Robertson G., Birol I., Bohlmann J., Breuil C.; RT "The genome and transcriptome of the pine saprophyte Ophiostoma RT piceae, and a comparison with the bark beetle-associated pine pathogen RT Grosmannia clavigera."; RL BMC Genomics 14:373-373(2013). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; KE148150; EPE07802.1; -; Genomic_DNA. DR EnsemblFungi; EPE07802; EPE07802; F503_00524. DR Proteomes; UP000016923; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EPE07802.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000016923}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EPE07802.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EPE07802.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EPE07802.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000016923}. FT DOMAIN 4 287 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 253 298 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 794 AA; 90778 MW; 38B25AE35D94C451 CRC64; MKFNIECRPP GLVPVSTDLS SYMCDLKKTL DAGGNCVLEM PSGTGKTVSL LSLIVAYQQY YPGQRKLIYC SRTMSEIEKA LAELQALMKY RTEELGYEEE FRGLGLTSRK NLCLHPSVKR EKSGAVVDAR CRSLTAGFVR EKKERGDEVD VCIYHDNLDK LEPHNLVPNG IWTLDGLLRY GEEHKQCPYF TSRRMMQFCN VIIYSYHYLL DPKIAERVSK ELSQDCIVVF DEAHNIDNVC IESLSTDITE DSLRKATRGA QNLERKINEM RETDQKQLEN EYQKLVQGLR EADEARQEDA FMANPTLPED LLKEAVPGNI RRAEHFVAFL KRFIEYLKTR MKVRQVISET PPSFLAHLKE YTFIEKKPLR FCAERLASLV RTLELTNIED YQPLREVATF ATLVATYEKG FLLILEPFES DTAEVPNPVL HFTCLDAAIA IKPVFERFSS VIITSGTISP LEMYPKMLNF NTVVQESYSM TLARRSFLPM VVTRGSDQAS MSTSFQVRNE PSVVRNFGNL LTEFAKITPD GMVVFFPSYL YMESIISMWQ GMGILDEVWK YKLILVETPD AQETSLALET YRTACCNGRG AVLLCVARGK VSEGIDFDHQ YGRTVLSIGV PFQYTESRIL KARLEFLRET YRIRENDFLS FDAMRHAAQC LGRVLRGKDD YGIMVLADRR YQKKRNQLPK WINQALLEAD ANLSTDMAVS NAKKFLRDMA QPFHAKDQEG ISTWSPADLK KHQEKADFDK IIELQEQING AGMARYAEKE EGTQEAENYD DAEMDEAMMD LDGL // ID S3D1A9_GLAL2 Unreviewed; 797 AA. AC S3D1A9; DT 18-SEP-2013, integrated into UniProtKB/TrEMBL. DT 18-SEP-2013, sequence version 1. DT 11-MAY-2016, entry version 20. DE SubName: Full=P-loop containing nucleoside triphosphate hydrolase {ECO:0000313|EMBL:EPE25786.1}; GN ORFNames=GLAREA_01698 {ECO:0000313|EMBL:EPE25786.1}; OS Glarea lozoyensis (strain ATCC 20868 / MF5171). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; OC Helotiales; Helotiaceae; Glarea. OX NCBI_TaxID=1116229 {ECO:0000313|EMBL:EPE25786.1, ECO:0000313|Proteomes:UP000016922}; RN [1] {ECO:0000313|EMBL:EPE25786.1, ECO:0000313|Proteomes:UP000016922} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 20868 / MF5171 {ECO:0000313|Proteomes:UP000016922}; RX PubMed=23688303; DOI=10.1186/1471-2164-14-339; RA Chen L., Yue Q., Zhang X., Xiang M., Wang C., Li S., Che Y., RA Ortiz-Lopez F.J., Bills G.F., Liu X., An Z.; RT "Genomics-driven discovery of the pneumocandin biosynthetic gene RT cluster in the fungus Glarea lozoyensis."; RL BMC Genomics 14:339-339(2013). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; KE145371; EPE25786.1; -; Genomic_DNA. DR RefSeq; XP_008087105.1; XM_008088914.1. DR EnsemblFungi; EPE25786; EPE25786; GLAREA_01698. DR GeneID; 19460756; -. DR Proteomes; UP000016922; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000016922}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000016922}. FT DOMAIN 7 278 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 797 AA; 90877 MW; C3FF7DCB3927D903 CRC64; MKFNIGDLPV LFPYPRIYPE QYDYMCDLKK TLDAGGHCVL EMPSGTGKTV SLLSLIVAYQ QYYPEHRKLI YCSRTMSEIE KALAELKALM KYRADQLGYV EEFRGMGLTS RKNLCLHPSV KREKSGAVVD ARCRSLTAGF VKEKKDRGED VNNLDLLEPH NLIPNGVWTL DGIMKYGEEH KQCPYFTSRR MMTFCNVIIY SYHYLLDPKI AERVSKELSN DCIVVFDEAH NIDNVCIESL STDITEESLR RATRGAQNLE TKISDMKDSD ADKLRAEYDS LVAGLRGAQE DRDEDAFMAN PALPDDLLKE AIPGNIRRAE HFVAFLKRFI EYLKTRMKVR QVISETPPSF LAHLREYTHI EKKPLRFCAE RLTSLVRTLE LTNIEDYQPL QEVATFATLV ATYEKGFLLI LEPYETETAE VPNPVLHFTC LDAAIAMKPV FDRFSTVIIT SGTISPLEMY PKMLNFETVV QESYPMTLAR RSFLPMIVTR GSDQVAISSG FQVRNEPSVV RNYGNLLTEF SKLTPDGMVV FFPSYLYMES IISMWQGMGI LDEVWKYKLI LVETPDAQET SLALETYRTA CCNGRGAILL CVARGKVSEG IDFDHQYGRT VLCIGVPFQY TESRILKARL EFLRETYRIK ENDFLSFDAM RHAAQCLGRV LRGKDDYGIM VLADKRFLRK RTQLPKWINE AILDAEVDLS TDMAVGTAKK FLRTMAQPFP SLDQDGVSTW RIEDLEAHKE KMENESIRQL RAEMEGIENG GGKEVVQNGN GKEEAQHMGD DAFDDAEAEA EMMKLDH // ID S6EE94_ZYGB2 Unreviewed; 771 AA. AC S6EE94; DT 16-OCT-2013, integrated into UniProtKB/TrEMBL. DT 16-OCT-2013, sequence version 1. DT 11-MAY-2016, entry version 16. DE SubName: Full=BN860_11606g1_1 {ECO:0000313|EMBL:CDF88496.1}; GN ORFNames=BN860_11606g {ECO:0000313|EMBL:CDF88496.1}; OS Zygosaccharomyces bailii (strain CLIB 213 / ATCC 58445 / CBS 680 / OS CCRC 21525 / NBRC 1098 / NCYC 1416 / NRRL Y-2227). OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; OC Saccharomycetes; Saccharomycetales; Saccharomycetaceae; OC Zygosaccharomyces. OX NCBI_TaxID=1333698 {ECO:0000313|EMBL:CDF88496.1, ECO:0000313|Proteomes:UP000019375}; RN [1] {ECO:0000313|Proteomes:UP000019375} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=CLIB 213 / ATCC 58445 / CBS 680 / CCRC 21525 / NBRC 1098 / NCYC RC 1416 / NRRL Y-2227 {ECO:0000313|Proteomes:UP000019375}; RX PubMed=23969048; DOI=10.1128/genomeA.00606-13; RA Galeote V., Bigey F., Devillers H., Neuveglise C., Dequin S.; RT "Genome sequence of the food spoilage yeast Zygosaccharomyces bailii RT CLIB 213(T)."; RL Genome Announc. 1:E0060613-E0060613(2013). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; HG316455; CDF88496.1; -; Genomic_DNA. DR PhylomeDB; S6EE94; -. DR Proteomes; UP000019375; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000019375}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000019375}. FT DOMAIN 7 285 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 771 AA; 88980 MW; 6C0FB75AF0DB4941 CRC64; MKFYIDDLPV LFPYPKIYPE QYHYMCDIKR TLDSGGNSIL EMPSGTGKTV SLLSLTIAYQ MHYPEHRKII YCSRTMSEIE KALVELENLM DYRTKELGHR EDFRGLGLTS RKNLCLHPQV SKERKGTVVD EKCRRMTNGQ ARHKKELDPD AKVELCDYHE NLYNLQVEDY LPKGVFSFEK LIKYCEERTL CPYFIVRRMI SLCNIIIYSY HYLLDPKIAE RVSNEVSKDG IVIFDEAHNI DNVCIESLSL DLTNDVLKRA TKGAYSLENR IEEVRQVDAK RLQDEYDKLV QDLHAADILD AEEEPAVETP VLSQDLITEA MPGNIRRADH FVSFLKRLIE YLKTRMKVLH VISETPKSFL QHLKQLTFID RKPLRFCAER LSLLVRTLEV SDIEDFTALK DIATFATLIS TYESGFLLII EPYEIENAAV PNPIMRFTCL DASIAIKPVF ERFSSVIITS GTISPLDMYP RMLNFETVLQ KSYAMTLAKK SFLPMIITKG SDQVAISSRF EIRNDPSIVR NYGSMLVEFA KITPDGMVVF FPSYLYMESI ISMWQTMGIL DEVWKYKLIL VETPDAQETS LALETYRKAC SNGRGAILFS VARGKVSEGI DFDHHYGRTV LMIGIPFQYT ESRILKARLE FLRENYQIRE NDFLSFDAMR HAAQCLGRVL RGKDDYGVMI LADRRFSRKR NQLPKWISQG LSDADLNLST DMAIANAKQF LRTMAQPTDP KDQEGVSVWR YEELVKYQQE KQNGTRDGAE LVHMEVDVEI D // ID S7RXN0_GLOTA Unreviewed; 795 AA. AC S7RXN0; DT 16-OCT-2013, integrated into UniProtKB/TrEMBL. DT 16-OCT-2013, sequence version 1. DT 11-MAY-2016, entry version 21. DE SubName: Full=DNA repair helicase {ECO:0000313|EMBL:EPQ58124.1}; GN ORFNames=GLOTRDRAFT_136900 {ECO:0000313|EMBL:EPQ58124.1}; OS Gloeophyllum trabeum (strain ATCC 11539 / FP-39264 / Madison 617) OS (Brown rot fungus). OC Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; OC Agaricomycetes; Gloeophyllales; Gloeophyllaceae; Gloeophyllum. OX NCBI_TaxID=670483 {ECO:0000313|EMBL:EPQ58124.1, ECO:0000313|Proteomes:UP000030669}; RN [1] {ECO:0000313|EMBL:EPQ58124.1, ECO:0000313|Proteomes:UP000030669} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 11539 {ECO:0000313|EMBL:EPQ58124.1, RC ECO:0000313|Proteomes:UP000030669}; RX PubMed=22745431; DOI=10.1126/science.1221748; RA Floudas D., Binder M., Riley R., Barry K., Blanchette R.A., RA Henrissat B., Martinez A.T., Otillar R., Spatafora J.W., Yadav J.S., RA Aerts A., Benoit I., Boyd A., Carlson A., Copeland A., Coutinho P.M., RA de Vries R.P., Ferreira P., Findley K., Foster B., Gaskell J., RA Glotzer D., Gorecki P., Heitman J., Hesse C., Hori C., Igarashi K., RA Jurgens J.A., Kallen N., Kersten P., Kohler A., Kuees U., RA Kumar T.K.A., Kuo A., LaButti K., Larrondo L.F., Lindquist E., RA Ling A., Lombard V., Lucas S., Lundell T., Martin R., McLaughlin D.J., RA Morgenstern I., Morin E., Murat C., Nagy L.G., Nolan M., Ohm R.A., RA Patyshakuliyeva A., Rokas A., Ruiz-Duenas F.J., Sabat G., Salamov A., RA Samejima M., Schmutz J., Slot J.C., St John F., Stenlid J., Sun H., RA Sun S., Syed K., Tsang A., Wiebenga A., Young D., Pisabarro A., RA Eastwood D.C., Martin F., Cullen D., Grigoriev I.V., Hibbett D.S.; RT "The Paleozoic origin of enzymatic lignin decomposition reconstructed RT from 31 fungal genomes."; RL Science 336:1715-1719(2012). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; KB469298; EPQ58124.1; -; Genomic_DNA. DR RefSeq; XP_007863392.1; XM_007865201.1. DR EnsemblFungi; EPQ58124; EPQ58124; GLOTRDRAFT_136900. DR GeneID; 19303655; -. DR KEGG; gtr:GLOTRDRAFT_136900; -. DR KO; K10844; -. DR Proteomes; UP000030669; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EPQ58124.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000030669}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EPQ58124.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EPQ58124.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EPQ58124.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000030669}. FT DOMAIN 7 291 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 795 AA; 90637 MW; 834D0CF1ACD7A4A1 CRC64; MKFFIDNLPI IFPYDRIYPE QYAYMCDLKR TLDATGHCVL EMPSGTGKTV SLLSLIVSYQ QFYPARRKLI YCSRTVPEIE KALSELKRLM DYRIACAETE EDKRKERSFT GLGLTSRKNL CIHPEVSKEK KGKVVDARCR DLTNSAVCEK GRANPGSVEL CDFHEKLGEK EPGNLIPTGI YTLADVLQYG RENGTCPYFT VRRMMPFVDV IIYSFHYLLD PKVAEQVSKE MSKDAIVVFD EAHNIDNVCI ESLSVDLTRP MLDSAVRSVT KLGEKIDEIK RTDASKLQDE YAKLVEGLQE ASDARDEDAF MANPVLPDDL LKEAIPGNIR KAEHFVAFLK RFVEYLKTRM RVLHVVAETP LSFLQHLKDI TYIERRPLRF CAERLQSLVR TLEITRVDEF SALQKVASFA TLVATYEKGF LLILEPFETE NATVPNPIFH FVCLDPAIAI KPVFERFSSV VITSGTISPL DMYPKMLQFT PVVQETYPMT LTRNAFLPLI ITRGSDQVAI SSRFEVRNDP AVVRNFGSIL VEYSKIVPDG IVAFFPSYLY MESIVAAWND MGILNEVWKH KLIFVETPDA NETSIALENY RRACNNGRGA VLLSVARGKV AEGIDFDHNY GRAVIMFGVP YQYTESRILK ARLEYLRDAY RIRESEFLGF DAIRNAAQCV GRVLRGKTDW GLMVFADKRF ARADKRSKLP RWIQQYITET TSNLSTDMAL TLSKLFMRTI SQNPNENQTG VSLWTLEDIE KAQAKQKEMA LLEAEQQRDE PMDEDDEYGD GGFDDRILGE INLDI // ID S7Z9G4_PENO1 Unreviewed; 812 AA. AC S7Z9G4; DT 16-OCT-2013, integrated into UniProtKB/TrEMBL. DT 16-OCT-2013, sequence version 1. DT 11-MAY-2016, entry version 17. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EPS25311.1}; GN ORFNames=PDE_00244 {ECO:0000313|EMBL:EPS25311.1}; OS Penicillium oxalicum (strain 114-2 / CGMCC 5302) (Penicillium OS decumbens). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; OC Eurotiomycetidae; Eurotiales; Aspergillaceae; Penicillium. OX NCBI_TaxID=933388 {ECO:0000313|EMBL:EPS25311.1, ECO:0000313|Proteomes:UP000019376}; RN [1] {ECO:0000313|EMBL:EPS25311.1, ECO:0000313|Proteomes:UP000019376} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=114-2 / CGMCC 5302 {ECO:0000313|Proteomes:UP000019376}; RX PubMed=23383313; DOI=10.1371/journal.pone.0055185; RA Liu G., Zhang L., Wei X., Zou G., Qin Y., Ma L., Li J., Zheng H., RA Wang S., Wang C., Xun L., Zhao G.-P., Zhou Z., Qu Y.; RT "Genomic and secretomic analyses reveal unique features of the RT lignocellulolytic enzyme system of Penicillium decumbens."; RL PLoS ONE 8:E55185-E55185(2013). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; KB644408; EPS25311.1; -; Genomic_DNA. DR EnsemblFungi; EPS25311; EPS25311; PDE_00244. DR PhylomeDB; S7Z9G4; -. DR Proteomes; UP000019376; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000019376}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000019376}. FT DOMAIN 7 302 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 812 AA; 92858 MW; 1E246FBE276C882C CRC64; MKFFIDDLPV LFPYPRVYPE QYAYMCDLKK TLDAGGHCVL EMPSGTGKTI SLLSLIVAYQ QHYPEHRKLI YCSRTMSEIE KALAELKGLM KYRTKELGQA EEFRALGLTS RKNLCLHPSV KREKSGTVVD ARCRSLTAGF VKEKKERGEE VDLCIYHEVC WANNLKYNVC SLTILKNLDL LEPHNLVPPG VFTLDGLTRY GEEHKQCPYF SARRMMPWCN VIIYSYHYLL DPKIAERVSR ELSKDCIVVF DEAHNIDNVC IESLSIDLSE DSLRKATRGA TNLERKIEEM KSTDAEKLQN EYSKLVEGLQ QAEQAREEDQ FIANPVLPDD LLKEAVPGNI RRAEHFVSFL KRFIEYLKTR MKVTHTISET PPSFLTHLKD LTYIERKPLR FCAERLTSLV RTLELVNIED YQPLQEVATF ATLVATYDKG FVLILEPFES EAATVPNPIL HFTCLDAAIA IKPVLDRFSS VIITSGTLSP LEMYPKMLGF TTVMQESYSM TLARRSFLPM IVTRGSDQAQ ISSSFGIRND PGVVRNYGTL VTEFARITPD GVVVFFPSYL YMESIISMWQ GMGILDQIWN YKLILVETPD AQESSLALET YRTACCNGRG AILFCVARGK VSEGIDFDHH YGRAVLCIGV PFQYTESRIL KARLEFLREN YRIRENDFLS FDAMRHAAQC LGRVLRGKDD YGVMVLADRR FERKRPQLPK WINQAMLDSE TNLSTDMAVA NAKSFLRTMA QPFKSKDQEG ISTWSLADIE RHEAKRKVEE ARMMHGDIDP AYQTNQIPST LAIIEDEYDD DIDEDLLMLD AQ // ID S8A2R4_DACHA Unreviewed; 781 AA. AC S8A2R4; DT 16-OCT-2013, integrated into UniProtKB/TrEMBL. DT 16-OCT-2013, sequence version 1. DT 11-MAY-2016, entry version 18. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EPS35446.1}; GN ORFNames=H072_11150 {ECO:0000313|EMBL:EPS35446.1}; OS Dactylellina haptotyla (strain CBS 200.50) (Nematode-trapping fungus) OS (Monacrosporium haptotylum). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Orbiliomycetes; OC Orbiliales; Orbiliaceae; mitosporic Orbiliaceae; Dactylellina. OX NCBI_TaxID=1284197 {ECO:0000313|EMBL:EPS35446.1, ECO:0000313|Proteomes:UP000015100}; RN [1] {ECO:0000313|Proteomes:UP000015100} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=CBS 200.50 {ECO:0000313|Proteomes:UP000015100}; RA Ahren D.G.; RT "Genomic mechanisms accounting for the adaptation to parasitism in RT nematode-trapping fungi."; RL Submitted (APR-2013) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:EPS35446.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AQGS01001130; EPS35446.1; -; Genomic_DNA. DR RefSeq; XP_011116520.1; XM_011118218.1. DR EnsemblFungi; EPS35446; EPS35446; H072_11150. DR GeneID; 22878132; -. DR Proteomes; UP000015100; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000015100}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000015100}. FT DOMAIN 7 274 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 781 AA; 89323 MW; 4EE8E20B0AC6D9EB CRC64; MRFEIDDLPV IFPYPRIYPG TLDAGGHCVL EMPSGTGKTV SLLSLIVAYQ QHYPEHRKLI YCSRTMSEIE KALYELKALM EYRAKELGFA EDFRGLGLTS RKNLCLHPSV KREKKGTVVD ARCRSLTAGF VKEKKERGEE VEMCIYHENL DLLEPHNLIP PGVFTFDDIL KYGETNKQCP YFTARRMMPF CNIIIYSYHY LLDPKIAERV SKELSKDCIV VFDEAHNIDN VCIESLSIDL TEDSLRKAAR GCTSLERKIE EMKSTDAEKL QQEYAKLVEG LQGASTAREE DSFMANPVLP DDLLKEAVPG NIRRAEHFVA FLKRFVEYLK TRMKVLHVIS ETPPSFLQHL KDLTFIEKKP LRFCAERLTS LIRTLELSNV EEFQALQEVA TFATLVATYE KGFLLILEPF ESDTATVPNP IFHFTCLDAS IAIKPVFDRF WSVVITSGTI SPLEMYPKML QFDCVVQESY SMTLARRSFL PMVVTRGSDQ VAISSRFEIR NDPSVVRNYG NLMIEFSKIT PDGLVIFFPS YLYMESIISM WQGMGILDEV WKYKLILVET PDSQETSLAL ETYRTACCNG RGAVLLCVAR GKVSEGIDFD HQYGRTVICI GVPFQYTESR ILKARLEFLR ENFRIKENDF LSFDAMRHAA QCLGRVLRGK DDYGIMVLAD KRFGKKKSQL PKWIAQALLD SEMNLSVDMS VAAAKKFLRT MAQPFHAKDQ EGISTWSLDD LNAHVSKMRI QQAEEEEQMQ LDAEGEPRNG EVKEEYEISD EEMDEAMMRL G // ID S8ESZ5_FOMPI Unreviewed; 794 AA. AC S8ESZ5; DT 16-OCT-2013, integrated into UniProtKB/TrEMBL. DT 16-OCT-2013, sequence version 1. DT 11-MAY-2016, entry version 19. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EPT06029.1}; GN ORFNames=FOMPIDRAFT_1109662 {ECO:0000313|EMBL:EPT06029.1}; OS Fomitopsis pinicola (strain FP-58527) (Brown rot fungus). OC Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; OC Agaricomycetes; Polyporales; Fomitopsis. OX NCBI_TaxID=743788 {ECO:0000313|EMBL:EPT06029.1, ECO:0000313|Proteomes:UP000015241}; RN [1] {ECO:0000313|EMBL:EPT06029.1, ECO:0000313|Proteomes:UP000015241} RP NUCLEOTIDE SEQUENCE. RC STRAIN=FP-58527 SS1 {ECO:0000313|EMBL:EPT06029.1}; RX PubMed=22745431; DOI=10.1126/science.1221748; RA Floudas D., Binder M., Riley R., Barry K., Blanchette R.A., RA Henrissat B., Martinez A.T., Otillar R., Spatafora J.W., Yadav J.S., RA Aerts A., Benoit I., Boyd A., Carlson A., Copeland A., Coutinho P.M., RA de Vries R.P., Ferreira P., Findley K., Foster B., Gaskell J., RA Glotzer D., Gorecki P., Heitman J., Hesse C., Hori C., Igarashi K., RA Jurgens J.A., Kallen N., Kersten P., Kohler A., Kuees U., RA Kumar T.K.A., Kuo A., LaButti K., Larrondo L.F., Lindquist E., RA Ling A., Lombard V., Lucas S., Lundell T., Martin R., McLaughlin D.J., RA Morgenstern I., Morin E., Murat C., Nagy L.G., Nolan M., Ohm R.A., RA Patyshakuliyeva A., Rokas A., Ruiz-Duenas F.J., Sabat G., Salamov A., RA Samejima M., Schmutz J., Slot J.C., St John F., Stenlid J., Sun H., RA Sun S., Syed K., Tsang A., Wiebenga A., Young D., Pisabarro A., RA Eastwood D.C., Martin F., Cullen D., Grigoriev I.V., Hibbett D.S.; RT "The Paleozoic origin of enzymatic lignin decomposition reconstructed RT from 31 fungal genomes."; RL Science 336:1715-1719(2012). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; KE504122; EPT06029.1; -; Genomic_DNA. DR EnsemblFungi; EPT06029; EPT06029; FOMPIDRAFT_1109662. DR OMA; DEVWKYK; -. DR Proteomes; UP000015241; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000015241}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000015241}. FT DOMAIN 7 291 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 744 767 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 794 AA; 90627 MW; C2880B76BEBB178F CRC64; MKFHIDDLPI VFPYDRIYPE QYSYMCDLKR TLDAQGHCVL EMPSGTGKTV SLLSLIVSYQ QFYPTKRKLI YCSRTVPEIE KALEELKRLM AYRLSCAETE EEKEKERSFY GIGLTSRKNL CIHPEVSKEK KGKVVDARCR DLTNSAVCEK GRQNPGSVDL CDWHENLGKL EPGNLIPPGI WTLADVLQHG RDNTVCPYFL VRRMMPFADV IIYSFHYLLD PKVAEQVSRE MSKDAIVVFD EAHNIDNVCI ESLSIDLTRP MLDSAARSVG RLGEKIEDIK KTDASKLQDE YAKLVEGLQE AANDEDAFMS NPVLPEDLLK EAIPGNIRKA EHFVAFLKRF VEYLKTRMRV LHVVAETPLS FLQHLKDITY IERRPLRFCA ERLQSLVRTL ELNRIDEYSA LQKVASFATL VATYEKGFLL ILEPFETDNA TVPNPIFHLT CLDPAIAIKP VFERFSSVVI TSGTISPLDM YPKMLQFTPV VQETYPMTLT RNAFLPLVIT RGSDQVAISS RFEVRNDPAV VRNFGSILVE YSKIVPDGIV AFFPSYLYME SIVAAWNDMG ILNEVWKNKL IFVETPDANE TSIALENYRR ACDNGRGAVL LSVARGKVSE GIDFDHNYGR AVIMFGIPYQ YTESRILKAR LEYLRDAYRI RESEFLGFDA MRNAAQCVGR VLRGKTDWGL MVFADKRFAR ADKRAKLPRW INQYITETAS NLSTDMALTL SKLFMRTISQ NPNENQTGVS LWTLEDIEKA QAKQKEMAMQ AEQQQQDQPM DEDDDYYGDG GLDDHILNEI DLDV // ID S9XKF5_SCHCR Unreviewed; 770 AA. AC S9XKF5; DT 16-OCT-2013, integrated into UniProtKB/TrEMBL. DT 16-OCT-2013, sequence version 1. DT 11-MAY-2016, entry version 21. DE SubName: Full=Transcription factor TFIIH complex subunit Rad15 {ECO:0000313|EMBL:EPY54196.1}; GN ORFNames=SPOG_04089 {ECO:0000313|EMBL:EPY54196.1}; OS Schizosaccharomyces cryophilus (strain OY26 / ATCC MYA-4695 / CBS OS 11777 / NBRC 106824 / NRRL Y48691) (Fission yeast). OC Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; OC Schizosaccharomycetes; Schizosaccharomycetales; OC Schizosaccharomycetaceae; Schizosaccharomyces. OX NCBI_TaxID=653667 {ECO:0000313|EMBL:EPY54196.1, ECO:0000313|Proteomes:UP000015464}; RN [1] {ECO:0000313|EMBL:EPY54196.1, ECO:0000313|Proteomes:UP000015464} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=OY26 / ATCC MYA-4695 / CBS 11777 / NBRC 106824 / NRRL Y48691 RC {ECO:0000313|Proteomes:UP000015464}; RX PubMed=21511999; DOI=10.1126/science.1203357; RA Rhind N., Chen Z., Yassour M., Thompson D.A., Haas B.J., Habib N., RA Wapinski I., Roy S., Lin M.F., Heiman D.I., Young S.K., Furuya K., RA Guo Y., Pidoux A., Chen H.M., Robbertse B., Goldberg J.M., Aoki K., RA Bayne E.H., Berlin A.M., Desjardins C.A., Dobbs E., Dukaj L., Fan L., RA FitzGerald M.G., French C., Gujja S., Hansen K., Keifenheim D., RA Levin J.Z., Mosher R.A., Mueller C.A., Pfiffner J., Priest M., RA Russ C., Smialowska A., Swoboda P., Sykes S.M., Vaughn M., RA Vengrova S., Yoder R., Zeng Q., Allshire R., Baulcombe D., RA Birren B.W., Brown W., Ekwall K., Kellis M., Leatherwood J., Levin H., RA Margalit H., Martienssen R., Nieduszynski C.A., Spatafora J.W., RA Friedman N., Dalgaard J.Z., Baumann P., Niki H., Regev A., Nusbaum C.; RT "Comparative functional genomics of the fission yeasts."; RL Science 332:930-936(2011). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; KE546988; EPY54196.1; -; Genomic_DNA. DR RefSeq; XP_013021805.1; XM_013166351.1. DR EnsemblFungi; EPY54196; EPY54196; SPOG_04089. DR GeneID; 25038403; -. DR Proteomes; UP000015464; Unassembled WGS sequence. DR GO; GO:0000439; C:core TFIIH complex; IEA:EnsemblFungi. DR GO; GO:0005829; C:cytosol; IEA:EnsemblFungi. DR GO; GO:0005675; C:holo TFIIH complex; IEA:EnsemblFungi. DR GO; GO:0000112; C:nucleotide-excision repair factor 3 complex; IEA:EnsemblFungi. DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:EnsemblFungi. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0043141; F:ATP-dependent 5'-3' DNA helicase activity; IEA:EnsemblFungi. DR GO; GO:0003684; F:damaged DNA binding; IEA:EnsemblFungi. DR GO; GO:0000717; P:nucleotide-excision repair, DNA duplex unwinding; IEA:EnsemblFungi. DR GO; GO:0033683; P:nucleotide-excision repair, DNA incision; IEA:EnsemblFungi. DR GO; GO:0070816; P:phosphorylation of RNA polymerase II C-terminal domain; IEA:EnsemblFungi. DR GO; GO:0045951; P:positive regulation of mitotic recombination; IEA:EnsemblFungi. DR GO; GO:0010525; P:regulation of transposition, RNA-mediated; IEA:EnsemblFungi. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:EnsemblFungi. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000015464}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000015464}. FT DOMAIN 7 283 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 770 AA; 88041 MW; DA27BAC21446180C CRC64; MKFYIDDLPV LFPYPRIYPE QYQYMCDLKH SLDVGGAALL EMPSGTGKTI SLLSIIVSYQ TYYPEHRKLI YCSRTMSEID KALAELKRLM AYRASQLGYE EPFLGLGLSS RKNLCLHPSV RREKNGNVVD ARCRSMTAGF VKEQKQAGMD VQLCDFHENL EDLEPHSLVP NGVWTLDDIT EYGTKHVRCP YFTVRRMLPF CNVIIYSYHY LLDPKIAERV SKELSKDCIV VFDEAHNIDN VCIESLSIDL TDSSLRKATR GVQALEQKVN EVKQSDAKKL QDEYQKLVRG LQDVNTASAE EQFMTNPVLP EDILQEAVPG NIRRAEHFVA FLKRFVEYLK TRMKVLHVIA ETPTSFLQHV KDLTFIDQKP LRFCAERLNS LVRALQIATI DDFQALQQVA TFATLVSTYE RGFVLILEPF ETENATVPNP ILHFSCLDAS IAIKPVFDRF RSVIITSGTL SPLDMYPKML QFNSVVQESY GMSLARNCFL PMVITRGGDQ VSISSKFEAR NDPSVVRNYG NILIEYSKIV PDGLVAFFPS YLYLESIVSS WQSMGILDEV WKYKLILVET PDPHETTLAL ETYRAACSNG RGAVLLSVAR GKVSEGVDFD HHYGRAVIMF GIPYQYTESR ILKARLEFLR DTYQIREADF LTFDAMRHAA QCLGRVLRGK DDHGIMVLAD KRYGRSDKRT KLPKWIQQYI TEGATNLSTD MSLALAKKFL RSMAQPFTSA DQEGISWWSF EDLQDHQRKS SRMKTVENEK HDEEMDIDMT // ID T0LP32_9EURY Unreviewed; 600 AA. AC T0LP32; DT 16-OCT-2013, integrated into UniProtKB/TrEMBL. DT 16-OCT-2013, sequence version 1. DT 11-MAY-2016, entry version 15. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EQB65993.1}; GN ORFNames=AMDU3_IPLC00001G0159 {ECO:0000313|EMBL:EQB65993.1}; OS Thermoplasmatales archaeon I-plasma. OC Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; OC environmental samples. OX NCBI_TaxID=667138 {ECO:0000313|EMBL:EQB65993.1, ECO:0000313|Proteomes:UP000017931}; RN [1] {ECO:0000313|EMBL:EQB65993.1, ECO:0000313|Proteomes:UP000017931} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RA Tyson G.W., Hugenholtz P., Allen E.E., Banfield J.F., Denef V.J.; RL Submitted (JUN-2013) to the EMBL/GenBank/DDBJ databases. RN [2] {ECO:0000313|EMBL:EQB65993.1, ECO:0000313|Proteomes:UP000017931} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RA Yelton A.P., Comolli L.R., Justice N., Castelle C., Denef V.J., RA Thomas B.C., Banfield J.F.; RT "Comparative genomics in acid mine drainage biofilm communities RT reveals metabolic and structural differentiation of co-occurring RT archaea."; RL Submitted (AUG-2013) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:EQB65993.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ATMD01000001; EQB65993.1; -; Genomic_DNA. DR Proteomes; UP000017931; Unassembled WGS sequence. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR014001; Helicase_ATP-bd. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00487; DEXDc; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW Complete proteome {ECO:0000313|Proteomes:UP000017931}; KW Reference proteome {ECO:0000313|Proteomes:UP000017931}. FT DOMAIN 1 256 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 600 AA; 68699 MW; 66AF9A47326B958F CRC64; MKGPLKFPYE MYPWQEMIFQ KLDSSNKKST ILESPTGSGK TAAVLFHVLT KYPDRRVVFL TRTNSQAENL LREARRMGVD KVMTFFGRGE MCLFRKQAPD MSQGTPEEQS SYCRVLVEKH KGGKGGCPYG TDYDGRWKKN VMSQEDFIEL GNEDFCPYFA QKRLAIEANV LVTSYSFFLN PFIRERFLDW MGAELKDIIL IADEAHNIPD LTRSLLSAKL THNSLAGCSK EIDQFGDMML NKINASYVID SLGEALSSLL KEGDRIITTQ EVTEAYMDAF QMNSLDIRGI LSLMANYGLS IRESRSNEGK LPRSYIYNTS IIASRMMEDD EGYRVMITHN DEPSGINLMN LETYDVLRFF GNAFRSFFMS GTISPFSKFI DEMGIDDPEK VLVKADYLER NLKVLFVDDV TSRYSLKDES RDKMNFYVKQ IVEGIKRNKV IFCTSYEQLS SFLELEMKGR IYFERKGMNN EEFVNLITTN FREKGGNLFA VVNGRISEGI DLPGKIVEVA VLTGIPYPPP APETAAMELF YEMKFRRGWE YAYEAVAATR MRQAIGRLIR SPEDRGVAII LDSRARKFRN DLPNLYLSKD PVKDANEFLD // ID T0LRC7_9EURY Unreviewed; 621 AA. AC T0LRC7; DT 16-OCT-2013, integrated into UniProtKB/TrEMBL. DT 16-OCT-2013, sequence version 1. DT 11-MAY-2016, entry version 13. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EQB66748.1}; GN ORFNames=AMDU2_EPLC00006G0305 {ECO:0000313|EMBL:EQB66748.1}; OS Thermoplasmatales archaeon E-plasma. OC Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; OC environmental samples. OX NCBI_TaxID=667137 {ECO:0000313|EMBL:EQB66748.1, ECO:0000313|Proteomes:UP000018052}; RN [1] {ECO:0000313|EMBL:EQB66748.1, ECO:0000313|Proteomes:UP000018052} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RA Tyson G.W., Hugenholtz P., Allen E.E., Banfield J.F., Denef V.J.; RL Submitted (JUN-2013) to the EMBL/GenBank/DDBJ databases. RN [2] {ECO:0000313|EMBL:EQB66748.1, ECO:0000313|Proteomes:UP000018052} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RA Yelton A.P., Comolli L.R., Justice N., Castelle C., Denef V.J., RA Thomas B.C., Banfield J.F.; RT "Comparative genomics in acid mine drainage biofilm communities RT reveals metabolic and structural differentiation of co-occurring RT archaea."; RL Submitted (AUG-2013) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:EQB66748.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ATME01000006; EQB66748.1; -; Genomic_DNA. DR Proteomes; UP000018052; Unassembled WGS sequence. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 4. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR014001; Helicase_ATP-bd. DR InterPro; IPR001650; Helicase_C. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00487; DEXDc; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. DR PROSITE; PS51194; HELICASE_CTER; 1. PE 4: Predicted; KW Complete proteome {ECO:0000313|Proteomes:UP000018052}; KW Reference proteome {ECO:0000313|Proteomes:UP000018052}. FT DOMAIN 1 271 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT DOMAIN 448 621 Helicase C-terminal. FT {ECO:0000259|PROSITE:PS51194}. SQ SEQUENCE 621 AA; 71015 MW; D34885C9991F680F CRC64; MVHESFDALN LRDYQRDAID FVISSLKEKN GAILESPTGS GKTIMGLVSA ISFARESKKK ILYLTRTNSQ QSQVIEEIRV IQKFLDIKAT AIQGRGNLCP LYREIENEDD FTSESLSKMC SSRKKKVVEG HQDACRFYNS RVKSDEIKNR IITELISPEE VYEELVPLEI CPYESIKYAM RDAEICIMPY SYFLNPGIAP SVLYNWRASR ESIVIILDEA HNLPELSRGI FSFKITMRQI ELVEKECADY GDPEFLPRIR ATDICEYIRN AIIDMEKERL SEQEESRIMF QDFIDYIQIS GKLTGENLDY IIGGLDTLGD SIEEAKEKLG KVPRSHVKTL ASELKFCFNA EESNYIAIIR KDNGGVFEAY CLDPSIVLKP LQESATIHLS GTLRPFDIYC RMTGFEDLPA KAVENVFPEE NLLIGYKRGI GTRFSDLNSE MFQKIGEEIQ SIIQSIKRKT IVFFPSRNLM NQVIEIIGNK GILVDSGDMD QIDLMHLISK FKKGNRPLFT VIGGRLSEGI NLPGKLLEIV ILAGIPYPKP DVKQRTIMAY YDHLYGRGWD YAVTFPTLVK MRQTIGRLIR NVDDRGVALI LDERAEIFKD YLRGLREFID VRNEIANFFV E // ID T0LVW2_COLGC Unreviewed; 791 AA. AC T0LVW2; DT 16-OCT-2013, integrated into UniProtKB/TrEMBL. DT 16-OCT-2013, sequence version 1. DT 11-MAY-2016, entry version 16. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EQB52500.1}; GN ORFNames=CGLO_07874 {ECO:0000313|EMBL:EQB52500.1}; OS Colletotrichum gloeosporioides (strain Cg-14) (Anthracnose fungus) OS (Glomerella cingulata). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; OC Sordariomycetes; Hypocreomycetidae; Glomerellales; Glomerellaceae; OC Colletotrichum. OX NCBI_TaxID=1237896 {ECO:0000313|EMBL:EQB52500.1, ECO:0000313|Proteomes:UP000015530}; RN [1] {ECO:0000313|Proteomes:UP000015530} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Cg-14 {ECO:0000313|Proteomes:UP000015530}; RX PubMed=23902260; DOI=10.1094/MPMI-03-13-0080-R; RA Alkan N., Meng X., Friedlander G., Reuveni E., Sukno S., Sherman A., RA Thon M., Fluhr R., Prusky D.; RT "Global aspects of pacC regulation of pathogenicity genes in RT Colletotrichum gloeosporioides as revealed by transcriptome RT analysis."; RL Mol. Plant Microbe Interact. 26:1345-1358(2013). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:EQB52500.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AMYD01001586; EQB52500.1; -; Genomic_DNA. DR EnsemblFungi; EQB52500; EQB52500; CGLO_07874. DR Proteomes; UP000015530; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000015530}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000015530}. FT DOMAIN 7 295 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 255 297 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 791 AA; 90735 MW; E270A1D7E6941D51 CRC64; MKFFIDDLPI LFPYPRIYPE QYAYMCDLKK TLDAGGHCVL EMPSGTGKTV SLLSLIVAYQ QHNPEHRKLI YCSRTMSEIE KALAELKALM KYRAQELGEE EEFRGLGLTS RKNLCLHPSV KQEKSGAIVD ARCRSLTAGF VKEKKDRGEN VDLCVYHDNL DLLEPHNLIP NGVWTFEGLL RYGEQHKQCP YFTARRMMQF CNVIIYSYHY LLDPKIAERV SKELSKDCIV VFDEAHNIDN VCIESLSTDI TEDSLRKATR GAQNLEKKIS EMRDTDQEQL QNEYQKLVEG LRDADEARQE DAFMANPALP DDLLKEAVPG NIRRAEHFVS FLKRFIEYLK TRMKVRHTIS ETPPSFLAHL REYTFIEKKP LRFCAERLTS LVRTLELTNI EDYQPLQEVA TFATLVATYE KGFLLILEPF ESETAEVPNP VLHFTCLDAA IAIRPVFDRF SSVIITSGTI SPLEMYPKML GFSTVVQESY SMTLARRSFL PMIVTRGSDQ ASVSTSFQVR NEPSVVRNYG TLLTEFAKIT PDGMVVFFPS YLYMESIISM WQGMNILEEV WKYKLILVET PDAQETSLAL ETYRTACCNG RGAVLLCVAR GKVSEGIDFD HQYGRTVLCI GVPFQYTESR ILKARLEFLR ETYRIRENDF LSFDAMRHAA QCLGRVLRGK DDYGIMVLAD RRFQKKRVQL PKWINQGLLD ADTNLSTDMA VSSARRFLKQ MAQPFRAKDQ EGVSTWSYED LMKHKEKMDL ERIQQLEAAG VDGMQLGADE GDEYGMDDDL DQDMMEIDDG F // ID T0M4C8_9EURY Unreviewed; 620 AA. AC T0M4C8; DT 16-OCT-2013, integrated into UniProtKB/TrEMBL. DT 16-OCT-2013, sequence version 1. DT 11-MAY-2016, entry version 13. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EQB71223.1}; GN ORFNames=AMDU1_APLC00032G0044 {ECO:0000313|EMBL:EQB71223.1}; OS Thermoplasmatales archaeon A-plasma. OC Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; OC environmental samples. OX NCBI_TaxID=667135 {ECO:0000313|EMBL:EQB71223.1, ECO:0000313|Proteomes:UP000018337}; RN [1] {ECO:0000313|EMBL:EQB71223.1, ECO:0000313|Proteomes:UP000018337} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RA Tyson G.W., Hugenholtz P., Allen E.E., Banfield J.F., Denef V.J.; RL Submitted (JUN-2013) to the EMBL/GenBank/DDBJ databases. RN [2] {ECO:0000313|EMBL:EQB71223.1, ECO:0000313|Proteomes:UP000018337} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RA Yelton A.P., Comolli L.R., Justice N., Castelle C., Denef V.J., RA Thomas B.C., Banfield J.F.; RT "Comparative genomics in acid mine drainage biofilm communities RT reveals metabolic and structural differentiation of co-occurring RT archaea."; RL Submitted (AUG-2013) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:EQB71223.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ATMF01000032; EQB71223.1; -; Genomic_DNA. DR Proteomes; UP000018337; Unassembled WGS sequence. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 4. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR014001; Helicase_ATP-bd. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00487; DEXDc; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW Complete proteome {ECO:0000313|Proteomes:UP000018337}; KW Reference proteome {ECO:0000313|Proteomes:UP000018337}. FT DOMAIN 1 267 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 620 AA; 70020 MW; 21432DD3B3DAD36D CRC64; MKAAYELRDY QKSLVEFIVD SLKTRGGAAI EAPTGSGKTL TGLVAAITYA RDSGKKILYL TRTNSQQEQV IKELRILAPE SGLKAVPIQG RHNLCPLYQE IEQGDSFSSD SLSRFCNGRK KKVREGDQNA CRFFNSRVNS KENMDKIFSE IPTAEEFLMY GLESEICPYE SLKLAASKAD IAIAPYAFFL NPDVAERFLS RWGVAREDLV IVLDEAHNLP DLAREVSSFT ISINSINLAE KEALEFGDAE LQERFRATDF CETLRNGILD LSRDMLKGQD EVRIRFADLV EYSSIGAGIK MDQFWSYAAL FHIFGDNITT RKEDMGRIPR SHVLSLASRV LSWKASEEEG YVAILNSENN GTVEAFCLEP TGILQSLRMS RTIHMSGTLE PFQIYKNITG FTEIATRKVS SIFPEENKLV LYYDGISTKY DSFDDREALN MRNQIQDIVR STGKKALIFF TSYNIMNRII DIGFDIEYLA ETKAKSQGDL MSMLNRFRKE NLPMLAVMGG RLSEGINFPG NELQVVVLAG IPYPRPGARQ KALYSYYQSV YGKGWEYAVT FPVVIKMRQA IGRLIRSESD TGVAVILDQR ATYFKKYIPE MRLSRNPAAD ASQFFINKSH // ID T0N688_9EURY Unreviewed; 630 AA. AC T0N688; DT 16-OCT-2013, integrated into UniProtKB/TrEMBL. DT 16-OCT-2013, sequence version 1. DT 11-MAY-2016, entry version 16. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EQB69185.1}; GN ORFNames=AMDU5_GPLC00004G0155 {ECO:0000313|EMBL:EQB69185.1}; OS Thermoplasmatales archaeon Gpl. OC Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; OC environmental samples. OX NCBI_TaxID=261391 {ECO:0000313|EMBL:EQB69185.1, ECO:0000313|Proteomes:UP000018202}; RN [1] {ECO:0000313|EMBL:EQB69185.1, ECO:0000313|Proteomes:UP000018202} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RX PubMed=23865623; DOI=10.1186/1471-2164-14-485; RA Yelton A.P., Comolli L.R., Justice N.B., Castelle C., Denef V.J., RA Thomas B.C., Banfield J.F.; RT "Comparative genomics in acid mine drainage biofilm communities RT reveals metabolic and structural differentiation of co-occurring RT archaea."; RL BMC Genomics 14:485-485(2013). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:EQB69185.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ATDV01000004; EQB69185.1; -; Genomic_DNA. DR Proteomes; UP000018202; Unassembled WGS sequence. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR014001; Helicase_ATP-bd. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00487; DEXDc; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW Complete proteome {ECO:0000313|Proteomes:UP000018202}; KW Reference proteome {ECO:0000313|Proteomes:UP000018202}. FT DOMAIN 9 280 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 630 AA; 72551 MW; B805A8BA4A21C615 CRC64; MNESNGESFA KSSYGSISLK PYQIDAINFA VECLLKQVVP IIESPTGSGK TIISIISSII YAKKTGKKVL YLTRTNSQQE QILKELKILS KAMDFRAIAM QGRVNMCPLY MELEKESDFT TESLSKMCSS RKKRTKERKE GGCYYYNSGI SSDETREYIL ENIQSPEDIF ETLRSRKICP YESLKFAMRD ADLVVMPYSY FVNSNMAITT IYNWRTSREN LVIIIDEAHN LPDIARESNS LEISMNTVNI SEKEAVDFGD PELQPSVHVS DFMEAIRVSM IELTREMVEK QKEKRIMFRD IYEEMSIYMK RKSDEIEYMV DALIAFGSQI EDQKENLGKV PMSHIKILGE KLKFLRFAEY DRFICIVSRD EEEKLEAYCL DPSIVLEPLF RSSTIHVSAT LDPVWLYTNM TGIVNFEFKS IKNIFPASNL LVLYRDDLTT KYSEFGAEMA DKYVKVISDI VTGLDRKSMV FFPSFNTMQY IETKVKFPHL SESRSMTQRD FQHLISLYRK ENRPLFGVMG GRLSEGINLP GNLLEVEIIA GIPFPKPTIK QRALSSYYDL LFGSGWQYAF LFPAIIKIRQ TMGRVIRSEE DIGVIIILDG RVQMLEPYIN ARLSNNIRDD INSFFSSHIK // ID T1EDV5_HELRO Unreviewed; 761 AA. AC T1EDV5; DT 16-OCT-2013, integrated into UniProtKB/TrEMBL. DT 16-OCT-2013, sequence version 1. DT 11-MAY-2016, entry version 24. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ESO12701.1, ECO:0000313|EnsemblMetazoa:HelroP105484}; GN ORFNames=HELRODRAFT_105484 {ECO:0000313|EMBL:ESO12701.1}; OS Helobdella robusta (Californian leech). OC Eukaryota; Metazoa; Lophotrochozoa; Annelida; Clitellata; Hirudinida; OC Hirudinea; Rhynchobdellida; Glossiphoniidae; Helobdella. OX NCBI_TaxID=6412 {ECO:0000313|EnsemblMetazoa:HelroP105484, ECO:0000313|Proteomes:UP000015101}; RN [1] {ECO:0000313|EnsemblMetazoa:HelroP105484, ECO:0000313|Proteomes:UP000015101} RP NUCLEOTIDE SEQUENCE. RA Hellsten U., Grimwood J., Chapman J.A., Shapiro H., Aerts A., RA Otillar R.P., Terry A.Y., Boore J.L., Simakov O., Marletaz F., RA Cho S.-J., Edsinger-Gonzales E., Havlak P., Kuo D.-H., Larsson T., RA Lv J., Arendt D., Savage R., Osoegawa K., de Jong P., Lindberg D.R., RA Seaver E.C., Weisblat D.A., Putnam N.H., Grigoriev I.V., Rokhsar D.S.; RL Submitted (DEC-2012) to the EMBL/GenBank/DDBJ databases. RN [2] {ECO:0000313|EMBL:ESO12701.1, ECO:0000313|EnsemblMetazoa:HelroP105484, ECO:0000313|Proteomes:UP000015101} RP NUCLEOTIDE SEQUENCE. RX PubMed=23254933; DOI=10.1038/nature11696; RA Simakov O., Marletaz F., Cho S.J., Edsinger-Gonzales E., Havlak P., RA Hellsten U., Kuo D.H., Larsson T., Lv J., Arendt D., Savage R., RA Osoegawa K., de Jong P., Grimwood J., Chapman J.A., Shapiro H., RA Aerts A., Otillar R.P., Terry A.Y., Boore J.L., Grigoriev I.V., RA Lindberg D.R., Seaver E.C., Weisblat D.A., Putnam N.H., Rokhsar D.S.; RT "Insights into bilaterian evolution from three spiralian genomes."; RL Nature 493:526-531(2013). RN [3] {ECO:0000313|EnsemblMetazoa:HelroP105484} RP IDENTIFICATION. RG EnsemblMetazoa; RL Submitted (JUN-2015) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AMQM01000218; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; KB095811; ESO12701.1; -; Genomic_DNA. DR RefSeq; XP_009009421.1; XM_009011173.1. DR EnsemblMetazoa; HelroT105484; HelroP105484; HelroG105484. DR GeneID; 20194757; -. DR KEGG; hro:HELRODRAFT_105484; -. DR CTD; 20194757; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR Proteomes; UP000015101; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 2. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000015101}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000015101}. FT DOMAIN 7 285 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 256 298 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 761 AA; 86782 MW; BEB1515E11CCC8B9 CRC64; MKLNIDGLTV YFPYEYIYPE QYLYMLELKK AIDAQGHCVL EMPSGTGKTI SLLSLIVAYL KAYPTQLTKL IYCSRTVPEL QKVMEELEHL FDYWQEVTGQ PLGLLGISLS SRKNLCIHPA VSQERDGKVV DGRCHGLTAS FVREQHKSNP SIPVCNFFEQ YDAQGKDVII PAGVYNLEAL KAYGLDRGWC PYFLARHSIT HANIIVYSYY YLLDPKIADL VSKELGKSSV VVFDEAHNID NVCIESMSLH ISRKTLDKCS LNLDSLKENI QRIKDEDASK LQKEYNRLVE GLKEANIARE TDVIMANPIL PDEVLQESVP GNIRNCEHFI IFMKRFVEYL KSRSHIQHFI QESPASFLKD CLQKVCIERK PLRFCCERLR SLLRTLELSD IQDYSALTLV ANFATMISTY TKGFTLIIEP YDDRTPTISN PLMHFSCMNA SIAIKPVFDR FQTVVITSGT LSPVEMYPRI LDFHPVTMAS FTMSLSRPCI CPMVVTRGSD QVSVSSKFES REDPAVIRNY GLLLAEMASV VADGIVCFFT SYVYMESIIA AWYDQGLIDQ VQKYKLLFIE TTDAAETSLA LANYQKACEN GRGAVLLSVA RGKVSEGIDF DHHYGRAVIM FGVPYVYTQS RILKARLEYL REQFHIREND FLTFDAMRHA AQCVGRALRG KTDYGVMVFA DKRFARTDKK NKLPKWIQEY LSDSVCNLST DDAVQLTKRF LRTMAQPFSR EDQLGHSLLT LEQLMSEDVQ QQLERKVHLI V // ID T1I4Q7_RHOPR Unreviewed; 756 AA. AC T1I4Q7; DT 16-OCT-2013, integrated into UniProtKB/TrEMBL. DT 16-OCT-2013, sequence version 1. DT 11-MAY-2016, entry version 22. DE SubName: Full=Uncharacterized protein {ECO:0000313|EnsemblMetazoa:RPRC011276-PA}; OS Rhodnius prolixus (Triatomid bug). OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; OC Pterygota; Neoptera; Paraneoptera; Hemiptera; Euhemiptera; OC Heteroptera; Panheteroptera; Cimicomorpha; Reduviidae; Triatominae; OC Rhodnius. OX NCBI_TaxID=13249 {ECO:0000313|EnsemblMetazoa:RPRC011276-PA, ECO:0000313|Proteomes:UP000015103}; RN [1] RP IDENTIFICATION. RG EnsemblMetazoa; RL Submitted (MAY-2015) to UniProtKB. RN [2] {ECO:0000313|EnsemblMetazoa:RPRC011276-PA} RP IDENTIFICATION. RG EnsemblMetazoa; RL Submitted (JUN-2015) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ACPB02009469; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EnsemblMetazoa; RPRC011276-RA; RPRC011276-PA; RPRC011276. DR OMA; LVVCNYH; -. DR Proteomes; UP000015103; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 2. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000015103}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000015103}. FT DOMAIN 7 282 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 756 AA; 86254 MW; 4ECA6441A3E52C25 CRC64; MKVIVDGLPV YFPYEYIYPE QYAYMTELKK AIDAKGHCLL EMPSGTGKTT TLLSLIVAYM CEYPHHLCKL IYCSRTIPEI EKVVEELRKL YDYYKEHGKE LELLGLVLSS RKNLCVHPQV SKERDGKIVD GRCHSLTTSY IRERHQADKT VPVCTFYENF DEFGRELAIP SGIYSLDDLK QYGLKNRFCP YFLARSAINY ANIVIYSYHY LLDPKIADVV SKEIARNSIV VFDEAHNIDN VCIESMSVKI NRKIIDRSAT NIQVLEKTVS EMKEANASNL REEYLKLVQG LKDASVRRET DVVLANPVLP DQILKEVVPG NIRTAEHFVG FLKRFLEYLK TRLKTQHVVH ESPAAFLKDV AAKVCIERKP LRFCAERLAS LLRTLEISDQ NDFSPLVLVT HLATLVSTYT KGFTIIIEPF EDKAPTVSNP ILHFSCLDAS IAVKPVFERF QTVVITSGTL SPLDMFPKIL DFQPVVLSSF TMTLARPCLL PMIVSKGSDQ VAMTSRYESR EDIAVVRNYG QLLVEVCSIV PDGVVCFFTS YLYLESVVAS WYDQGVIDSL QRKKLLFIET QDAAETSLAL FNYIKACEIG RGAVLLSVAR GKVSEGVDFD HHLGRAVLMF GIPYVYTQSR ILRARLDYLR DNFQIRENDF LTFDAMRHAA QCVGRALRGK TDYGIMIFAD KRFGRADKRS KLPKWIQEYL SDDLCHLSTE EAVQIAKKWL RQMAQPFCRE DQLGTALLTL EQLEARKDIY ESVTQR // ID T1IV49_STRMM Unreviewed; 767 AA. AC T1IV49; DT 16-OCT-2013, integrated into UniProtKB/TrEMBL. DT 16-OCT-2013, sequence version 1. DT 11-MAY-2016, entry version 21. DE SubName: Full=Uncharacterized protein {ECO:0000313|EnsemblMetazoa:SMAR005040-PA}; OS Strigamia maritima (European centipede) (Geophilus maritimus). OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Myriapoda; Chilopoda; OC Pleurostigmophora; Geophilomorpha; Linotaeniidae; Strigamia. OX NCBI_TaxID=126957 {ECO:0000313|EnsemblMetazoa:SMAR005040-PA, ECO:0000313|Proteomes:UP000014500}; RN [1] {ECO:0000313|Proteomes:UP000014500} RP NUCLEOTIDE SEQUENCE. RA Richards S.R., Qu J., Jiang H., Jhangiani S.N., Agravi P., RA Goodspeed R., Gross S., Mandapat C., Jackson L., Mathew T., Pu L., RA Thornton R., Saada N., Wilczek-Boney K.B., Lee S., Kovar C., Wu Y., RA Scherer S.E., Worley K.C., Muzny D.M., Gibbs R.; RL Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases. RN [2] {ECO:0000313|EnsemblMetazoa:SMAR005040-PA} RP IDENTIFICATION. RG EnsemblMetazoa; RL Submitted (FEB-2015) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; JH431575; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EnsemblMetazoa; SMAR005040-RA; SMAR005040-PA; SMAR005040. DR OMA; LVVCNYH; -. DR PhylomeDB; T1IV49; -. DR Proteomes; UP000014500; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000014500}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000014500}. FT DOMAIN 7 283 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 767 AA; 87734 MW; F4A07E8970F31EF3 CRC64; MRINVDGLLV YFPYDYIYPE QYTYMLELKR SLDAKGHGIL EMPSGTGKTI SLLSLIVAYL KTYPANLSKL LYCSRTLPEI EKVIEELKNL LAYYEKETNV KQNILGLVLT SRKNLCVHPQ VSKERDGKIV DGRCYSLTAG HVRARHTRDS GVEVCSFYEG FDLHGREFPL PSGVYNMDDL KEFSRAKGWC PYFMARYSIL HANIVVYSYH YLLDPKIADL VSKEMSKTSV VVFDEAHNID NVCIDAMSVN ITKRTVDKCQ TNINVLEKTV QRMKETDSQR LKTEYQRLVE GLREANVARE TDVVLTNPAL PDDILTEAVP GNIRTAEHFI SFMKRLVEYM KTRLRVQHVV QETPASFLRD ISMRVCIERK PLRFCAERLR SMIRTLEISD LADFSAISLI ANFATLVSTY TKGFTIIIEP FDDRTPTISN PVLHFSCLDS SIAIKPVFDR FQSVIITSGT LSPPDMYPKI LDFQPVVTTS LTMTLSRPCI CPMIVSKGND QVAMTTKFET REDIAVIRNY GNLLVDITQI VPDGVVCFFT SYLYMETVVA SWYEQGIIDN IQRRKLLFIE TQDAAETSLA LLNYIKACEN GRGAVLLSVA RGKVSEGIDF DHHLGRAVVM FGIPYVYTQS RILKARLEYL RDQFQIKEND FLTFDAMRHA AQCVGRALRG KTDYGIMIFA DKRFSRSDKR GKLPKWIQEH LKDSYCNLST EEAIQMSKRF LRQMAQEFNR VNINNDKEDQ LGVSLLTLEQ LESEKIQRMI AEKLGHN // ID T1JW17_TETUR Unreviewed; 759 AA. AC T1JW17; DT 16-OCT-2013, integrated into UniProtKB/TrEMBL. DT 16-OCT-2013, sequence version 1. DT 11-MAY-2016, entry version 22. DE SubName: Full=Uncharacterized protein {ECO:0000313|EnsemblMetazoa:tetur02g06630.1}; OS Tetranychus urticae (Two-spotted spider mite). OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; OC Acari; Acariformes; Trombidiformes; Prostigmata; Eleutherengona; OC Raphignathae; Tetranychoidea; Tetranychidae; Tetranychus. OX NCBI_TaxID=32264 {ECO:0000313|EnsemblMetazoa:tetur02g06630.1, ECO:0000313|Proteomes:UP000015104}; RN [1] {ECO:0000313|EnsemblMetazoa:tetur02g06630.1, ECO:0000313|Proteomes:UP000015104} RP NUCLEOTIDE SEQUENCE. RA Rombauts S.; RL Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases. RN [2] {ECO:0000313|EnsemblMetazoa:tetur02g06630.1} RP IDENTIFICATION. RG EnsemblMetazoa; RL Submitted (JUN-2015) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CAEY01000807; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EnsemblMetazoa; tetur02g06630.1; tetur02g06630.1; tetur02g06630. DR OMA; DEVWKYK; -. DR Proteomes; UP000015104; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000015104}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000015104}. FT DOMAIN 7 283 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 759 AA; 86595 MW; 317329046F582C74 CRC64; MKLEIDGLEV LFPYDYIYPE QYTYMCELKK AIDSKGHGLL EMPSGTGKTA SLLSLIIAYQ RAHPYHVNKL IYCSRTVPEI EKCVAELKRL RKYYEKYGKA NDLFVGLCLT SRKNLCIHPT VSKERDGKVV DGKCYALTAS HKREMAKSDP EVEACNFFEK FDTIGREAPL PSGVYSIDDL KEFGKDKGYC PYFMARYAMS YANVIVYSYY YLLDPKIADL VSKEMSRNSI VVFDEAHNID NVCIESMSVT ITKRTIDRGQ ANINALASTI QGIREADEER LKNEYNRLVQ GLREANIARE NEQILANPTL PDDILQEAIP GNIRTAEHFV NFLKRLLEYI KTRLRTQHVI QESPAGFLRD ISQKVFIERK PLKFCSERLR SLIKTLEITE ITDFSPLVTI CNFATLIATY TKGFSLIIEP FDDRTPTISN PILHFSCMDA SLAIKPVFNR FQTVIITSGT LSPLDMYPKI LDFRPVITTS LTMTLARQCI FPMIVAKGND QVSMSSKFES RNDIAVIRNF GILLVEMAGV VPDGLVAFFP SYAYLETVVA SWYEQGIIDS LLRKKLLFIE TTDAAETSLA LYNYVKACEN GRGAVLLSVA RGKVSEGVDF DHHLGRCVIM FGIPYVYTQS RILKARLEYL RDNYQIREND FLTFDAMRHA AQCVGRALRG KTDYGIMCFA DKRFARYDKR GKLPKWIQEH LKDSLCNLSI EEGVQLAKRF LRQMAQPFTR EDQLGISLLT YEQLQDEEIR KNVIDKVAS // ID T5ADA8_OPHSC Unreviewed; 718 AA. AC T5ADA8; DT 13-NOV-2013, integrated into UniProtKB/TrEMBL. DT 13-NOV-2013, sequence version 1. DT 11-MAY-2016, entry version 16. DE SubName: Full=DNA repair helicase RAD3 {ECO:0000313|EMBL:EQL03450.1}; GN ORFNames=OCS_00835 {ECO:0000313|EMBL:EQL03450.1}; OS Ophiocordyceps sinensis (strain Co18 / CGMCC 3.14243) (Yarsagumba OS caterpillar fungus) (Hirsutella sinensis). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; OC Sordariomycetes; Hypocreomycetidae; Hypocreales; Ophiocordycipitaceae; OC Ophiocordyceps. OX NCBI_TaxID=911162 {ECO:0000313|EMBL:EQL03450.1, ECO:0000313|Proteomes:UP000019374}; RN [1] {ECO:0000313|EMBL:EQL03450.1, ECO:0000313|Proteomes:UP000019374} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Co18 / CGMCC 3.14243 {ECO:0000313|Proteomes:UP000019374}; RC TISSUE=Fruit-body {ECO:0000313|EMBL:EQL03450.1}; RA Hu X., Zhang Y., Xiao G., Zheng P., Xia Y., Zhang X., St Leger R.J., RA Liu X., Wang C.; RT "Genome survey uncovers the secrets of sex and lifestyle in RT caterpillar fungus."; RL Chin. Sci. Bull. 58:2846-2854(2013). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; KE652211; EQL03450.1; -; Genomic_DNA. DR EnsemblFungi; EQL03450; EQL03450; OCS_00835. DR Proteomes; UP000019374; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 3. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EQL03450.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000019374}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EQL03450.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EQL03450.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EQL03450.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000019374}. FT DOMAIN 1 209 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 718 AA; 82670 MW; 2583EEBFAAFAEEF1 CRC64; MSEIEKALVE LESLMKYRAE QLGHEEDFRG LGLTSRKNLC LHPSVKREKS GSIVDARCRS LTAGFVKEKK DRGESVDVCV YHDNLDLLEP HHLIPNGVWT FDGILRYGEE HKQCPYFTAR RMMQYCNVVI FSYHYLLDPK IAERVTRDFS KDCIVVFDEA HNIDNVCIEA LSTDITEESL RKATRGAQNL ERKISEMRDT DQEQLQSEYQ KLVQGLRDAE EAREEDAFMS NPALPDDLLR EAVPGNIRRA EHFIAFLKRF IEYLKTRMKV RQVISETPPS FLAHLKEHTF IEKKPLRFCA ERLTSLVRTL ELTSIEDYQP LQEVAIFATL VATYEKGFLL ILEPYESDTA EVPNPIFHFT CLDAAIAIRP VFERFYSVII TSGTISPLEI YPKMLDFSTV IQESYSITLA RRSFLPMIVT RGSDQASIST SFQVRNEPSV VRNYGTLLIE FAKITPDGLV VFFPSYLYME SIISMWQGMG ILDEVWKYKL ILVETPDAQE TSLALETYRT ACCNGRGAIL LCVARGKVSE GIDFDHQYGR TVLCIGVPFQ YTESRILKAR LEFLRETYRI KENDFLSFDA MRHAAQCLGR VLRGKDDYGI MVLADRRFQK KRAQLPKWIN QGLLEADVNL STDMAVSSAR RFLRTMAQPF RAKDQEGIST WGYKDLKQQQ DKMDMEKRRE QEEAARYPMA QAQGLGAIGS YGYDDEELER EMMEMDGF // ID U1HV27_ENDPU Unreviewed; 842 AA. AC U1HV27; DT 13-NOV-2013, integrated into UniProtKB/TrEMBL. DT 13-NOV-2013, sequence version 1. DT 11-MAY-2016, entry version 16. DE SubName: Full=DNA repair helicase rad15 {ECO:0000313|EMBL:ERF74530.1}; GN ORFNames=EPUS_08941 {ECO:0000313|EMBL:ERF74530.1}; OS Endocarpon pusillum (strain Z07020 / HMAS-L-300199) (Lichen-forming OS fungus). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; OC Chaetothyriomycetidae; Verrucariales; Verrucariaceae; Endocarpon. OX NCBI_TaxID=1263415 {ECO:0000313|EMBL:ERF74530.1, ECO:0000313|Proteomes:UP000019373}; RN [1] {ECO:0000313|Proteomes:UP000019373} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Z07020 / HMAS-L-300199 {ECO:0000313|Proteomes:UP000019373}; RX PubMed=24438332; DOI=10.1186/1471-2164-15-34; RA Wang Y.-Y., Liu B., Zhang X.-Y., Zhou Q.-M., Zhang T., Li H., RA Yu Y.-F., Zhang X.-L., Hao X.-Y., Wang M., Wang L., Wei J.-C.; RT "Genome characteristics reveal the impact of lichenization on lichen- RT forming fungus Endocarpon pusillum Hedwig (Verrucariales, RT Ascomycota)."; RL BMC Genomics 15:34-34(2014). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; KE720873; ERF74530.1; -; Genomic_DNA. DR RefSeq; XP_007799818.1; XM_007801627.1. DR EnsemblFungi; ERF74530; ERF74530; EPUS_08941. DR GeneID; 19243781; -. DR Proteomes; UP000019373; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:ERF74530.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000019373}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:ERF74530.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:ERF74530.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:ERF74530.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000019373}. FT DOMAIN 25 313 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 266 315 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 842 AA; 96027 MW; AD9C3CE5AEED4EE0 CRC64; MKFYIEYDIP YHSAVTPSLT DLNSDLPVLF PYPRIYPEQY DYMCDLKKTL EAGGHCVLEM PSGTGKTVSL LSLIVAYQQH YPEKRKLIYC SRTMSEIEKA LAELKALMKY RSEQLGIVEE FRGLGLTSRK NLCLHPSVKR EKSGAVVDAR CRSLTAGFVK EKKERGEDVE SCIYHDNLDL LEPHNLVPPG VFTLDGLLRY GEQHKQCPYF SARRMMSFCN VIIYSYHYLL DPKIAERVSK ELSKDCIVVF DEAHNIDNVC IESLSIDLTE DSLRKATRGA HNLERKIEEM KSSDEEKLQN EYQKLVEGLR QADEARAEDA FMANPALPDD LLKEAVPGNI RRAEHFVAFL KRFIEYLKTR MKVLYVIQET PPSFLAHLKD LTFIERKPLR FCAERLTSLV RTLELTNIED YQPLQEVATF ATLAATYDTG FLLILEPYES EQATVPNPIL HFTCLDASIA IKPVFERFSS VIITSGTISP LEMYPKMLNF STVLQESYPM SLERRSFLPM IVTRGSDQQT ISSGFQIRSD LGVVRNYGNL LFEFAKITPD GIVVFFPSYL YMEQIISMWQ GAGILDQIWN YKLLLVETPD AQETSLALET YRTACDSGKG AILLCVARGK VSEGIDFDHH FGRTVICIGA PFQYTESRIL KARLEFLRET YRIKETDFLS FDAMRHAAQC LGRVLRGKDD YGIMVLADRR FQRKRNQLPR WIADAMTDGE TGLSTDMAVG MAKKFLRSIA QPLPKTSREL SGGKGKDSWS LQDLENVQAE RRSRRGEGGH TGRDEDEDRH HDMQGINNQN GTGNGHVEEI DRALEPTSNY MRNGLDEFDE GIDDDELMRM EA // ID U1NX54_ASCSU Unreviewed; 848 AA. AC U1NX54; DT 13-NOV-2013, integrated into UniProtKB/TrEMBL. DT 13-NOV-2013, sequence version 1. DT 11-MAY-2016, entry version 16. DE SubName: Full=Tfiih basal transcription factor complex helicase xpd subunit {ECO:0000313|EMBL:ERG86192.1}; GN ORFNames=ASU_02660 {ECO:0000313|EMBL:ERG86192.1}; OS Ascaris suum (Pig roundworm) (Ascaris lumbricoides). OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Ascaridida; OC Ascaridoidea; Ascarididae; Ascaris. OX NCBI_TaxID=6253 {ECO:0000313|EMBL:ERG86192.1, ECO:0000313|Proteomes:UP000017900}; RN [1] {ECO:0000313|EMBL:ERG86192.1, ECO:0000313|Proteomes:UP000017900} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC TISSUE=Sperm {ECO:0000313|EMBL:ERG86192.1}; RX PubMed=21685128; DOI=10.1101/gr.121426.111; RA Wang J., Czech B., Crunk A., Wallace A., Mitreva M., Hannon G.J., RA Davis R.E.; RT "Deep small RNA sequencing from the nematode Ascaris reveals RT conservation, functional diversification, and novel developmental RT profiles."; RL Genome Res. 21:1462-1477(2011). RN [2] {ECO:0000313|EMBL:ERG86192.1, ECO:0000313|Proteomes:UP000017900} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC TISSUE=Sperm {ECO:0000313|EMBL:ERG86192.1}; RX PubMed=23123092; DOI=10.1016/j.devcel.2012.09.020; RA Wang J., Mitreva M., Berriman M., Thorne A., Magrini V., RA Koutsovoulos G., Kumar S., Blaxter M.L., Davis R.E.; RT "Silencing of germline-expressed genes by DNA elimination in somatic RT cells."; RL Dev. Cell 23:1072-1080(2012). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:ERG86192.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AEUI02000052; ERG86192.1; -; Genomic_DNA. DR Proteomes; UP000017900; Unassembled WGS sequence. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 2. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:ERG86192.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000017900}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:ERG86192.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:ERG86192.1}; Membrane {ECO:0000256|SAM:Phobius}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:ERG86192.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000017900}; KW Transmembrane {ECO:0000256|SAM:Phobius}; KW Transmembrane helix {ECO:0000256|SAM:Phobius}. FT TRANSMEM 7 29 Helical. {ECO:0000256|SAM:Phobius}. FT DOMAIN 84 371 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 848 AA; 95882 MW; DE2E40E7304A43DF CRC64; MHAMVPFLIL TCCITQFSVT YWGILLLLAT AEFALLTSST GVTKTTRVPA TASEAGDWVV TEVRLLRDTL SSTTTIEMKI DVDGLEVYFP YDYIYPEQVL YMEEVKKTLD AQGHALLEMP SGTGKTISLL SLVLAYMLKF PDKLDKLIYC SRTIPEIEKC VEELRNLFKY YEQVNGASCF YCFAFSKRPA LLALAISARK NLCINESVAC LRQGSAVDGA CQRLTAGFVR AKRKLQPDLP ACSFFEKFDA QREVVLPAGV YNLSNLRKWG HQKGVCPYFM ARANADRANI IVYSYHYILD PKIAELVSKN FSRRSCVVFD EAHNIDNVCI ESMSVSLTKS TVEKAMQKVA LLDKHVQRLK EENSERLQNE YERLVEGLRQ VEQDRANDET LANPVLPDSI LQEAVPGSIR TAQHFINFLR RFIEYLKYRM RSTTVLVESP ASFLFDIQER MYIERRPLRF CTERFASLAR TLELADISDF HSLVLVTNFA TLVSSYGPGF SLIIEPLDEK SGDAHSCTMH LNCMDASIAI RPILQRFQSV IITSGTLSPL EMYPKILDFD PAVMASLSMT LARPCIAPLI VSKGNDQVAI TSRFESRDDA AVIRNYGNLV LEVASIVPDG VVVFFTSYVY MENVVSIWYD QRIIDELMKH KLLFIETTDA LETSVALEKY VEACDSGRGA ILFSVARGKV SEGIDFSHHL GRAVIMLGIP YVYTESRILR ARLEYLREHH GIKENDFLTF DAMRHAAQCV GRALRGKTDY GLMIFADKRF AKKDKMGKLP RWIQEYLTPG NVNLSIEEAG MTARRWLPLM AQPFTKEDQL GVALLTQNML EGEQPVNKKF AHVLQEVD // ID U4LQH9_PYROM Unreviewed; 782 AA. AC U4LQH9; DT 11-DEC-2013, integrated into UniProtKB/TrEMBL. DT 11-DEC-2013, sequence version 1. DT 11-MAY-2016, entry version 19. DE SubName: Full=Similar to DNA repair helicase rad15 acc. no. P26659 {ECO:0000313|EMBL:CCX33794.1}; GN ORFNames=PCON_01870 {ECO:0000313|EMBL:CCX33794.1}; OS Pyronema omphalodes (strain CBS 100304) (Pyronema confluens). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Pezizomycetes; OC Pezizales; Pyronemataceae; Pyronema. OX NCBI_TaxID=1076935 {ECO:0000313|EMBL:CCX33794.1, ECO:0000313|Proteomes:UP000018144}; RN [1] {ECO:0000313|EMBL:CCX33794.1, ECO:0000313|Proteomes:UP000018144} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=CBS 100304 {ECO:0000313|Proteomes:UP000018144}; RC TISSUE=Vegetative mycelium {ECO:0000313|EMBL:CCX33794.1}; RX PubMed=24068976; DOI=10.1371/journal.pgen.1003820; RA Traeger S., Altegoer F., Freitag M., Gabaldon T., Kempken F., RA Kumar A., Marcet-Houben M., Poggeler S., Stajich J.E., Nowrousian M.; RT "The genome and development-dependent transcriptomes of Pyronema RT confluens: a window into fungal evolution."; RL PLoS Genet. 9:e1003820-e1003820(2013). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; HF936189; CCX33794.1; -; Genomic_DNA. DR EnsemblFungi; CCX33794; CCX33794; PCON_01870. DR Proteomes; UP000018144; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CCX33794.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000018144}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:CCX33794.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CCX33794.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:CCX33794.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000018144}. FT DOMAIN 1 263 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 782 AA; 88921 MW; 9A9D87BB0E34578E CRC64; MTDLKRTLDA GGHCVLEMPS GTGKTVSLLS LIVAYQLSFP EPRKLIYCSR TMSEIEKALA ELKALMAYRA KELGYVEEFR GLGLTSRKNL CLHPSVKREK RGEVVDARCR SMTAGFVKEK KARGEDVELC VYHDNLDLLE PHNLVPPGVY TFDSLMKYCE KTTQCPYFSA RRMMPFCNVI IYSYHYLLDP KIADRVSKEF SKDCIVVFDE AHNIDNVCIE SLSIDLTEDS LRKAARGASN LEKKITEMKA SDATKLQNEY QKLVDGLREE EERREAEESF MTNPVLPDDL LKEAVPGNIR RAEHFVAFLK RFVEYLKTRM KVLHVISETP ASFLKHLKDL TYIERKPLRF CAERLQSLVR TLELANVEDY LPLQEVATFA TLVATYEKGF LLILEPFESE AAKVPNPVLH YTCLDASIAI KPVFDRFSSV IITSGTLSPL EMYPRMLQFD TVVQESYTMT LARRSFLPLI ITRGSDQVAI SSRFEIRNDP SVVRNYGNIL IEFAKITPDG MVVFFPSYLY MESIISMWQG MGILDEVWKY KLLLVETPDS QETSLALETY RTACSNGRGA VMLCVARGKV SEGIDFDHHY GRTVLCIGIP YQYTESRILK ARLEFLRENF RIKENDFLSF DAMRHAAQCL GRVLRGKDDY GIMVLADKRY GRKRNQLPRW INQAMMESDT NMSTDMAVAA GKKFLRTMAQ RMEEKDGIST WTLEELMEHQ RKQKVGLERM EEVRDGDNGA GPGAPPGGSG GGDADEYDYS DEEELMKMDI DPPTAAQVRA AA // ID U4U951_DENPD Unreviewed; 738 AA. AC U4U951; DT 11-DEC-2013, integrated into UniProtKB/TrEMBL. DT 11-DEC-2013, sequence version 1. DT 11-MAY-2016, entry version 21. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ERL89592.1}; GN ORFNames=D910_06957 {ECO:0000313|EMBL:ERL89592.1}; OS Dendroctonus ponderosae (Mountain pine beetle). OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; OC Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; OC Cucujiformia; Curculionidae; Scolytinae; Dendroctonus. OX NCBI_TaxID=77166 {ECO:0000313|EMBL:ERL89592.1, ECO:0000313|Proteomes:UP000030742}; RN [1] {ECO:0000313|EMBL:ERL89592.1, ECO:0000313|Proteomes:UP000030742} RP NUCLEOTIDE SEQUENCE. RX PubMed=23537049; DOI=10.1186/gb-2013-14-3-r27; RA Keeling C.I., Yuen M.M., Liao N.Y., Roderick Docking T., Chan S.K., RA Taylor G.A., Palmquist D.L., Jackman S.D., Nguyen A., Li M., RA Henderson H., Janes J.K., Zhao Y., Pandoh P., Moore R., Sperling F.A., RA W Huber D.P., Birol I., Jones S.J., Bohlmann J.; RT "Draft genome of the mountain pine beetle, Dendroctonus ponderosae RT Hopkins, a major forest pest."; RL Genome Biol. 14:R27-R27(2013). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; KB632176; ERL89592.1; -; Genomic_DNA. DR Proteomes; UP000030742; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000030742}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000030742}. FT DOMAIN 1 266 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 738 AA; 84239 MW; D7B31929397994DB CRC64; MCELKKALDA KGHCLLEMPS GTGKTTTLLS LIVAYMIEHP HDVRKLIYCS RTVPEIEKVM EELKKLLDYY DKLDGQYPSL VGLVLSSRKN MCIHPQVSTE REGKIVDGKC HSLTASYIRE RHNIDDTTAV CQYYEGFSLD GKESNLPYGV YNLDDIKQYG RDRNWCPYFL ARFAIMHANI VVYSYHYLLD PKIADVVSKE LARESVIIFD EAHNIDNVCI DSMSVKIHKR TIERATANIG TLEKHVSEMR DEDHRKLKEE YQRLVEGLRD ASVARDTDLI LSNPVLPDEI LQEAVPGNIR NAEHFICFLK RFVEYLKTRL RVQHVVQESP VGFLKDVQQK VCIERKPLRF CAERLASLLR TLEITDMTEF GPVVLITHLA TLVSTYTKGF TIIVEPFDDK TPTVSNPILH FSCLDSSIAI KPVFDRFQTV VITSGTLSPL DMYPKILNFQ PVIMSSFTMT LARPCLLPMI VAKGNDQVAI SSKFETREDN AVIRNYGQLL VEVAANVPDG IVCFFTSYLY LESVVAAWYD QGVIDSLQRY KLLFIETQDS AETSFALMYY IKACESGRGA VLLSVARGKV SEGVDFDHHL GRAVLMFGIP YVYTQSRILK ARLDYLRDQF QIRENDFLTF DAMRHAAQCV GRAIRGKTDY GIMIFADKRF SRADKRSKLP KWIQEHLKDS LCNLSTEEAI QIAKRWLRQM AQPFTREDQL GVSLLTLEQL EAMEEKKLGD QAQQKSDS // ID U5HDY0_USTV1 Unreviewed; 793 AA. AC U5HDY0; DT 11-DEC-2013, integrated into UniProtKB/TrEMBL. DT 11-DEC-2013, sequence version 1. DT 11-MAY-2016, entry version 24. DE SubName: Full=DNA repair helicase rad15 {ECO:0000313|EMBL:KDE04236.1}; DE SubName: Full=Uncharacterized protein {ECO:0000313|EnsemblFungi:MVLG_05335T0}; GN Name=MVLG_05335 {ECO:0000313|EnsemblFungi:MVLG_05335T0}; GN ORFNames=MVLG_05335 {ECO:0000313|EMBL:KDE04236.1}; OS Microbotryum lychnidis-dioicae (strain p1A1 Lamole / MvSl-1064) OS (Anther smut fungus). OC Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; OC Microbotryomycetes; Microbotryales; Microbotryaceae; Microbotryum. OX NCBI_TaxID=683840 {ECO:0000313|EMBL:KDE04236.1}; RN [1] {ECO:0000313|EnsemblFungi:MVLG_05335T0, ECO:0000313|Proteomes:UP000017200} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=p1A1 Lamole {ECO:0000313|EnsemblFungi:MVLG_05335T0, RC ECO:0000313|Proteomes:UP000017200}; RA Cuomo C., Perlin M., Young S.K., Zeng Q., Gargeya S., Alvarado L., RA Berlin A., Chapman S.B., Chen Z., Freedman E., Gellesch M., RA Goldberg J., Griggs A., Gujja S., Heilman E., Heiman D., Howarth C., RA Mehta T., Neiman D., Pearson M., Roberts A., Saif S., Shea T., RA Shenoy N., Sisk P., Stolte C., Sykes S., White J., Yandava C., RA Haas B., Nusbaum C., Birren B.; RT "The genome sequence of Microbotryum violaceum strain p1A1 Lamole."; RL Submitted (NOV-2010) to the EMBL/GenBank/DDBJ databases. RN [2] {ECO:0000313|EMBL:KDE04236.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=P1A1 Lamole {ECO:0000313|EMBL:KDE04236.1}; RG The Broad Institute Genome Sequencing Platform; RA Earl A., Ward D., Feldgarden M., Gevers D., Butler R., Young S.K., RA Zeng Q., Gargeya S., Fitzgerald M., Haas B., Abouelleil A., RA Alvarado L., Arachchi H.M., Berlin A., Brown A., Chapman S.B., RA Chen Z., Dunbar C., Freedman E., Gearin G., Gellesch M., Goldberg J., RA Griggs A., Gujja S., Heilman E., Heiman D., Howarth C., Larson L., RA Lui A., MacDonald P.J.P., Mehta T., Montmayeur A., Murphy C., RA Neiman D., Pearson M., Priest M., Roberts A., Saif S., Shea T., RA Shenoy N., Sisk P., Stolte C., Sykes S., White J., Yandava C., RA Wortman J., Nusbaum C., Birren B.; RL Submitted (NOV-2010) to the EMBL/GenBank/DDBJ databases. RN [3] {ECO:0000313|EMBL:KDE04236.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=P1A1 Lamole {ECO:0000313|EMBL:KDE04236.1}; RX PubMed=26076695; DOI=10.1186/s12864-015-1660-8; RA Perlin M.H., Amselem J., Fontanillas E., Toh S.S., Chen Z., RA Goldberg J., Duplessis S., Henrissat B., Young S., Zeng Q., RA Aguileta G., Petit E., Badouin H., Andrews J., Razeeq D., Gabaldon T., RA Quesneville H., Giraud T., Hood M.E., Schultz D.J., Cuomo C.A.; RT "Sex and parasites: genomic and transcriptomic analysis of RT Microbotryum lychnidis-dioicae, the biotrophic and plant-castrating RT anther smut fungus."; RL BMC Genomics 16:461-461(2015). RN [4] {ECO:0000313|EnsemblFungi:MVLG_05335T0} RP IDENTIFICATION. RG EnsemblFungi; RL Submitted (JUN-2015) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AEIJ01000551; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; GL541712; KDE04236.1; -; Genomic_DNA. DR EnsemblFungi; MVLG_05335T0; MVLG_05335T0; MVLG_05335. DR Proteomes; UP000017200; Unassembled WGS sequence. DR GO; GO:0000439; C:core TFIIH complex; IEA:EnsemblFungi. DR GO; GO:0005675; C:holo TFIIH complex; IEA:EnsemblFungi. DR GO; GO:0000112; C:nucleotide-excision repair factor 3 complex; IEA:EnsemblFungi. DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:EnsemblFungi. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0043141; F:ATP-dependent 5'-3' DNA helicase activity; IEA:EnsemblFungi. DR GO; GO:0003684; F:damaged DNA binding; IEA:EnsemblFungi. DR GO; GO:0033683; P:nucleotide-excision repair, DNA incision; IEA:EnsemblFungi. DR GO; GO:0070816; P:phosphorylation of RNA polymerase II C-terminal domain; IEA:EnsemblFungi. DR GO; GO:0045951; P:positive regulation of mitotic recombination; IEA:EnsemblFungi. DR GO; GO:0010525; P:regulation of transposition, RNA-mediated; IEA:EnsemblFungi. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:EnsemblFungi. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:KDE04236.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000017200}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:KDE04236.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:KDE04236.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:KDE04236.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000017200}. FT DOMAIN 7 289 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 793 AA; 90085 MW; 83FCEE7B6C10E493 CRC64; MRFFMDDMEF IFPYDKMYPE QYAYVHDLKR SLDAEGHCVL EMPSGTGKTV SLLSLIIAYQ YHERKMGRPE RKLIYCSRTV PEIEKALAEL KRLMKYRKEA YGIDDVDFLG IGLSSRKNLC IHPSVKSEKK GKAVDARCRD MTNGAAKARW EKDPESVELC DFHEKLGEMD QDRLIPFGVH TLDDVKAYGI KYGICPYFAI RRMFVHASVI IYSFHYLLDP KVAEQVSKEM SKDSIVVFDE AHNIDNVCIE SLSIDLTRPI LDNAARCVES LDVKIKEMKE TDKEKLEEEY AKLVEGLRGN LGEDEEANGE ADDFMANPIL PADILQEAVP GNIRRAEHFT AFLARFVEYL KTRTRVLHVV AETPVSFLQH LKDITFIEKK PLKFCAERLS SLVRTLELTR IDEFSPLQKV AAFATLVATY DKGFRLILEP FETENATVPN PVLHLVCLDA SLAIAPVFER FSSVVITSGT LSPLDMYPKM LGFEAAVLES YVMTLSRDCF LPLVVTRGAD QTEISSRFEV RNDPAVVRNF GTLLVEMAKA VPDGVVAFFP SYLYMESIVS AWMEMGVLNE VLKHKLIFIE TPDAPETSAA LDNFRRACDN GRGAVLLSVA RGKVSEGIDF DHNYGRAVIM FGIPYQYTES RILKARLEYL RDAYRIREND FLTFDAMRHA AQCVGRVLRG KSDYGLMVFA DKRFAKLDKR AKLPKWIGQY IKDSDTNLST DLAIAHSKKF LRAMAQPFVE SSKSAWGIDQ IMEKQAGLDP NRDPDNDEPE EEDDEADEYG DMIDDEALME LDV // ID U5MXH4_CLOSA Unreviewed; 765 AA. AC U5MXH4; DT 22-JAN-2014, integrated into UniProtKB/TrEMBL. DT 22-JAN-2014, sequence version 1. DT 11-MAY-2016, entry version 16. DE SubName: Full=DNA helicase, Rad3 {ECO:0000313|EMBL:AGX45290.1}; GN ORFNames=CLSA_c43300 {ECO:0000313|EMBL:AGX45290.1}; OS Clostridium saccharobutylicum DSM 13864. OC Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; OC Clostridium. OX NCBI_TaxID=1345695 {ECO:0000313|EMBL:AGX45290.1, ECO:0000313|Proteomes:UP000017118}; RN [1] {ECO:0000313|EMBL:AGX45290.1, ECO:0000313|Proteomes:UP000017118} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=DSM 13864 {ECO:0000313|EMBL:AGX45290.1}; RX PubMed=24285650; RA Poehlein A., Hartwich K., Krabben P., Ehrenreich A., Liebl W., RA Durre P., Gottschalk G., Daniel R.; RT "Complete Genome Sequence of the Solvent Producer Clostridium RT saccharobutylicum NCP262 (DSM 13864)."; RL Genome Announc. 1:e00997-13(2013). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP006721; AGX45290.1; -; Genomic_DNA. DR RefSeq; WP_022750562.1; NC_022571.1. DR EnsemblBacteria; AGX45290; AGX45290; CLSA_c43300. DR KEGG; csb:CLSA_c43300; -. DR Proteomes; UP000017118; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 4. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR001650; Helicase_C. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF00270; DEAD; 1. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 5. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. DR PROSITE; PS51194; HELICASE_CTER; 1. PE 4: Predicted; KW ATP-binding {ECO:0000313|EMBL:AGX45290.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000017118}; KW Helicase {ECO:0000313|EMBL:AGX45290.1}; KW Hydrolase {ECO:0000313|EMBL:AGX45290.1}; KW Nucleotide-binding {ECO:0000313|EMBL:AGX45290.1}; KW Reference proteome {ECO:0000313|Proteomes:UP000017118}. FT DOMAIN 183 443 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT DOMAIN 591 765 Helicase C-terminal. FT {ECO:0000259|PROSITE:PS51194}. SQ SEQUENCE 765 AA; 89613 MW; A2C0C40A31067D4B CRC64; MDKVIIKESV RNLVEFCLKK GHIDNRFSGS ARAVDGIKAH QKLQADNERI YKNYEKEVYL TYKFEMEKSV INIEGRADGI IIEDKIIIEE IKSTYKNFAY IDDLNELHWA QAKIYAFMYG KQNKVEEIYI RLSYVHLETD EVKSFEKKFT MFELEEFTLK VLKEYENFIL FINKQRNIRN ESIKLIKFPF EKYREGQRRL INISYCTIKE GERLFVQAPT GIGKTISTIF PSVKALGEEI GERIIYLTSK TINREVAEDA FKRLRQEGLN FKSIIITAKE KMCCNDTFDC NPENCKYANE YYSRIRIVIL DVLKNEECIS SEILQKYAEK YAVCPFELSL DLSMYCDGII CDYNYIFDPR VSLTRMLESN GNIVLIDEAH NLIDRSRNMY SATLCKSQIL NCKKITKGKF NKLHSVLGKI NNYFIDLRNE CDEKEVEWFY EAEGPKELNK ILKLFLKESE EILVRGSKFG GYEEILQLYF DINAFNGTMQ LYDKNYVTCM KKESKDFQLT LFCVDPSKNL KEYLSKCYSV ILFSATMSPI KYYIDMLGGD EKSYRLKLPS PFKKENLKVY VSPINIRYNY RKKTLKLVGD TICSFINKRV GNYIIFSPSY AYMELLWDKM NQRNINNYKL IKQKQGMSEE EKTDFLEKFK NNNNLLVFCV LGGMFSEGID LPGNQLIGSI IIGVGYPKIG MENEIIKEFY KENGYDYAYV FPGINKVQQG VGRVIRTETD TGRVLLIDDR YITNKYGVLL PNEWYPINKY LCDNI // ID U5Q578_9EURY Unreviewed; 678 AA. AC U5Q578; DT 22-JAN-2014, integrated into UniProtKB/TrEMBL. DT 22-JAN-2014, sequence version 1. DT 11-MAY-2016, entry version 14. DE SubName: Full=Rad3-related DNA helicase {ECO:0000313|EMBL:AGY50200.1}; GN ORFNames=MMINT_14060 {ECO:0000313|EMBL:AGY50200.1}; OS Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1. OC Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; OC Methanomassiliicoccaceae; Methanomassiliicoccus. OX NCBI_TaxID=1295009 {ECO:0000313|EMBL:AGY50200.1, ECO:0000313|Proteomes:UP000014070}; RN [1] {ECO:0000313|EMBL:AGY50200.1, ECO:0000313|Proteomes:UP000014070} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Issoire-Mx1 {ECO:0000313|EMBL:AGY50200.1}; RX PubMed=23846268; DOI=10.1128/genomeA.00453-13; RA Borrel G., Harris H.M., Parisot N., Gaci N., Tottey W., RA Mihajlovski A., Deane J., Gribaldo S., Bardot O., Peyretaillade E., RA Peyret P., O'Toole P.W., Brugere J.F.; RT "Genome Sequence of "Candidatus Methanomassiliicoccus intestinalis" RT Issoire-Mx1, a Third Thermoplasmatales-Related Methanogenic Archaeon RT from Human Feces."; RL Genome Announc. 1:142-142(2013). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP005934; AGY50200.1; -; Genomic_DNA. DR EnsemblBacteria; AGY50200; AGY50200; MMINT_14060. DR KEGG; mer:MMINT_14060; -. DR KO; K10844; -. DR Proteomes; UP000014070; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR014001; Helicase_ATP-bd. DR InterPro; IPR001650; Helicase_C. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00487; DEXDc; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. DR PROSITE; PS51194; HELICASE_CTER; 1. PE 4: Predicted; KW ATP-binding {ECO:0000313|EMBL:AGY50200.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000014070}; KW Helicase {ECO:0000313|EMBL:AGY50200.1}; KW Hydrolase {ECO:0000313|EMBL:AGY50200.1}; KW Nucleotide-binding {ECO:0000313|EMBL:AGY50200.1}; KW Reference proteome {ECO:0000313|Proteomes:UP000014070}. FT DOMAIN 44 309 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT DOMAIN 493 672 Helicase C-terminal. FT {ECO:0000259|PROSITE:PS51194}. SQ SEQUENCE 678 AA; 75868 MW; 0108DB0FE2CDC44D CRC64; MSGNFCDKCG SLLNPATGKC PRCLSGAPVA HFQNAARSSQ SIEKHGHELF PYEPRPFQLE IVDCIRDTLD SGKHIIMESG TGTGKTICSL VGTLEHSKPR KKKIIYLTRT VSQSDQVMRE LRTISRNNKV TGIAIAGRMK SCLLQKQEEM GDVPPAVMSR ICEDRKKRTI AKERGGCPYY ADFLAIGELA FTQYCFANLP TVGEFDKFCE KQGACPYEAR KAIMPMAEII AVPYIHLLSE DIRNSLFDRL KIEGGDFTVI VDEAHNLIDA ARDQESFHIS VSDIDSVLVE IRETGNVYLK NNISIFDLCI LLKDIIETAV KELIPPRSND ARLGRRFLEG KLRQELGISG EDLDNLCFAM IDRGEKILED RVDSGKEPMS YILKLGAALN SWIGSSDSMY LKTVSSDNGG MLCAACLEPS EISKFLLGTG GAVHMSGTLK PLKQYADLLD LTPVSVLKEF PSPFPKTNKL TLYTEDVSAG QREMKDDPSM KLRIEQYIID ICNATDRNTM VFFRSYEMLK SMRYSLESEI DRKLYWEESG HSYKLANAIE SFKTHKDGVF FTVMGGKISE GLDFPGQELD IAVIVGIPYP PPSLVSDELK RRYDARYGSG TGWEYISAAP AVRKMQQAIG RLIRTETDKG VAIILDSRAS RYREQLDAKP TKDPVKELTD FLGWSRRF // ID U9TRU9_RHIID Unreviewed; 760 AA. AC U9TRU9; DT 22-JAN-2014, integrated into UniProtKB/TrEMBL. DT 22-JAN-2014, sequence version 1. DT 11-MAY-2016, entry version 20. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ESA10860.1}; GN ORFNames=GLOINDRAFT_28954 {ECO:0000313|EMBL:ESA10860.1}; OS Rhizophagus irregularis (strain DAOM 181602 / DAOM 197198 / MUCL OS 43194) (Arbuscular mycorrhizal fungus) (Glomus intraradices). OC Eukaryota; Fungi; Glomeromycota; Glomeromycetes; Glomerales; OC Glomeraceae; Rhizophagus. OX NCBI_TaxID=747089 {ECO:0000313|EMBL:ESA10860.1, ECO:0000313|Proteomes:UP000018888}; RN [1] {ECO:0000313|Proteomes:UP000018888} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=DAOM 181602 / DAOM 197198 / MUCL 43194 RC {ECO:0000313|Proteomes:UP000018888}; RX PubMed=24277808; DOI=10.1073/pnas.1313452110; RA Tisserant E., Malbreil M., Kuo A., Kohler A., Symeonidi A., RA Balestrini R., Charron P., Duensing N., Frei dit Frey N., RA Gianinazzi-Pearson V., Gilbert L.B., Handa Y., Herr J.R., Hijri M., RA Koul R., Kawaguchi M., Krajinski F., Lammers P.J., Masclaux F.G., RA Murat C., Morin E., Ndikumana S., Pagni M., Petitpierre D., RA Requena N., Rosikiewicz P., Riley R., Saito K., San Clemente H., RA Shapiro H., van Tuinen D., Becard G., Bonfante P., Paszkowski U., RA Shachar-Hill Y.Y., Tuskan G.A., Young J.P.W., Sanders I.R., RA Henrissat B., Rensing S.A., Grigoriev I.V., Corradi N., Roux C., RA Martin F.; RT "Genome of an arbuscular mycorrhizal fungus provides insight into the RT oldest plant symbiosis."; RL Proc. Natl. Acad. Sci. U.S.A. 110:20117-20122(2013). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; KI286636; ESA10860.1; -; Genomic_DNA. DR EnsemblFungi; ESA10860; ESA10860; GLOINDRAFT_28954. DR Proteomes; UP000018888; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000018888}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000018888}. FT DOMAIN 7 283 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 760 AA; 87045 MW; 3E309A7DA2BCE469 CRC64; MRFTIDGLPV YFPYDKIYPE QYAYMSDLKK ALDAEGHCVL EMPSGTGKTV SLLSLIVAYQ MHYSEKRKLI YCSRTVPEIE KALAELQILI EYRKSQGVEE SFLGIGLTSR KNLCLHPTVS QQKWGKVVDA KCRNLTASWV RDKSKFDSNV ELCDFYETLE KHDPNELLMD GVYTLEDLRV FGKEKCFCPY YLARRVIPFA NVVIYSYHYL LDPKVAELVS KELSKNCIVV FDEAHNIDNV CIESLSIDLT KPNLDASARS IAKLSEKIDE VKAKDSERLK DEYTKLVEGL RAAREARDED TFMSNPVLPD DLLTEAIPGN IRKAEHFIAF LRRFIEYIKT RMRIQHVVAE TPSSFLQHLR ELTFIEAKPL RFCSQRLTSL IHTLELSDLD EYYALHKVAA FATLVATYAT GFLLILEPFE NETVPNPILH YACLDASIAI KPVFERFKTV VITSGTLSPL DMYPKMLSFQ PVVQESYSMT LTRNCFLPLV ITRGSDQVAI SSKFEVRNDP AVVRNFGQIL VEFSKIVPDG IVAFFPSYLY MESIVSMWND MGILNETWKH KLIFVETPDA AETSLALENY RTACDNGRGA ILLSVARGKV SEGIDFDHNY GRAVIMFGVP YQYTENRILK ARLEFLRENY RIRENDFLTF DAMRHAAQCV GRVLRGKTDY GLMIFADKRF GRTDKRNKLP KWINQYITDS ATNLSTDMSL DRAKKFLRSM AQPFDDQRGV SLWTLEDIIA KQRNPSSHLN NNFGGRMIQG // ID V2XVQ5_MONRO Unreviewed; 793 AA. AC V2XVQ5; DT 22-JAN-2014, integrated into UniProtKB/TrEMBL. DT 22-JAN-2014, sequence version 1. DT 11-MAY-2016, entry version 18. DE SubName: Full=Dna repair helicase rad3 {ECO:0000313|EMBL:ESK96961.1}; GN ORFNames=Moror_6539 {ECO:0000313|EMBL:ESK96961.1}; OS Moniliophthora roreri (strain MCA 2997) (Cocoa frosty pod rot fungus) OS (Crinipellis roreri). OC Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; OC Agaricomycetes; Agaricomycetidae; Agaricales; Marasmiaceae; OC mitosporic Marasmiaceae; Moniliophthora. OX NCBI_TaxID=1381753 {ECO:0000313|EMBL:ESK96961.1, ECO:0000313|Proteomes:UP000017559}; RN [1] {ECO:0000313|EMBL:ESK96961.1, ECO:0000313|Proteomes:UP000017559} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=MCA 2997 {ECO:0000313|EMBL:ESK96961.1, RC ECO:0000313|Proteomes:UP000017559}; RX PubMed=24571091; DOI=10.1186/1471-2164-15-164; RA Meinhardt L.W., Costa G.G.L., Thomazella D.P.T., Teixeira P.J.P.L., RA Carazzolle M.F., Schuster S.C., Carlson J.E., Guiltinan M.J., RA Mieczkowski P., Farmer A., Ramaraj T., Crozier J., Davis R.E., RA Shao J., Melnick R.L., Pereira G.A.G., Bailey B.A.; RT "Genome and secretome analysis of the hemibiotrophic fungal pathogen, RT Moniliophthora roreri, which causes frosty pod rot disease of cacao: RT mechanisms of the biotrophic and necrotrophic phases."; RL BMC Genomics 15:164-164(2014). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:ESK96961.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AWSO01000038; ESK96961.1; -; Genomic_DNA. DR RefSeq; XP_007843793.1; XM_007845602.1. DR EnsemblFungi; ESK96961; ESK96961; Moror_6539. DR GeneID; 19294515; -. DR KEGG; mrr:Moror_6539; -. DR KO; K10844; -. DR Proteomes; UP000017559; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:ESK96961.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000017559}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:ESK96961.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:ESK96961.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:ESK96961.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000017559}. FT DOMAIN 7 291 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 793 AA; 90113 MW; 2AC32A406FB99B86 CRC64; MKFTIDNLPV VFPYDRIYPE QYAYMCDLKR TLDATGHCVL EMPSGTGKTV SLLSLIVSYQ QFYPTRRKLI YCSRTVPEIE KALAELKRLM AYRISCAETE EEKEREKNFT GLGLTSRKNL CIHPEVSKEK KGKVVDARCR DLTNSAACEK GRAEPGSVEL CDWHENLGKL EPGNLVPPGI WTLADLLQYG RDEVICPYFT VRRMLPFVDV IIYSFHYLLD PKVAEQVSKE MSKDAIVVFD EAHNIDNVCI ESLSIDLTRP MLDSAARSIG KLGDRIEEVK TKDAAKLQDE YAKLVEGLQE NTGSAEDIDG FMTAPVLPED LLNEAIPGNI RKAEHFVAFL KRFVEYLKTR MRVLHVVAET PLSFLQHLKD ITYIERRPLR FCAERLQSLI RTLELSRLDE YSALQKVASF ATLVSTYEKG FLLILEPFET ENATVPNPIF HFTCLDPSLA IKPVFERFSS VVITSGTISP LDMYPKMLQF SPVVQETYPM TLTRNSFLPL VITRGSDQVA ISSRFEVRND PAVVRNFGSI LVEYSKIVPD GIVAFFPSYL YMESIVAAWN DMGILNEVWK HKLIFVETPD ANETSIALEN YRRACDNGRG AVLLSVARGK VSEGIDFDHN YGRAVIMFGV PYQYTESRIL KARLEYLRDA YRIRESEFLG FDAMRNAAQC VGRVLRGKTD WGLMVFADKR FARADKRAKL PRWINQYITE TASNLSTDMA LTLSKLFMRT ISQNPNENQT GVSLWTLDDV LKAQAKQLAL AEMDVDQESQ HDEEDVYSDG GISDRMLAEF EVD // ID V4B8W8_LOTGI Unreviewed; 760 AA. AC V4B8W8; DT 22-JAN-2014, integrated into UniProtKB/TrEMBL. DT 22-JAN-2014, sequence version 1. DT 11-MAY-2016, entry version 21. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ESP02287.1}; GN ORFNames=LOTGIDRAFT_238022 {ECO:0000313|EMBL:ESP02287.1}; OS Lottia gigantea (Giant owl limpet). OC Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Gastropoda; OC Patellogastropoda; Lottioidea; Lottiidae; Lottia. OX NCBI_TaxID=225164 {ECO:0000313|EMBL:ESP02287.1, ECO:0000313|Proteomes:UP000030746}; RN [1] {ECO:0000313|EMBL:ESP02287.1, ECO:0000313|Proteomes:UP000030746} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RX PubMed=23254933; DOI=10.1038/nature11696; RA Simakov O., Marletaz F., Cho S.J., Edsinger-Gonzales E., Havlak P., RA Hellsten U., Kuo D.H., Larsson T., Lv J., Arendt D., Savage R., RA Osoegawa K., de Jong P., Grimwood J., Chapman J.A., Shapiro H., RA Aerts A., Otillar R.P., Terry A.Y., Boore J.L., Grigoriev I.V., RA Lindberg D.R., Seaver E.C., Weisblat D.A., Putnam N.H., Rokhsar D.S.; RT "Insights into bilaterian evolution from three spiralian genomes."; RL Nature 493:526-531(2013). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; KB200294; ESP02287.1; -; Genomic_DNA. DR RefSeq; XP_009046995.1; XM_009048747.1. DR EnsemblMetazoa; LotgiT238022; LotgiP238022; LotgiG238022. DR GeneID; 20250633; -. DR KEGG; lgi:LOTGIDRAFT_238022; -. DR CTD; 20250633; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR Proteomes; UP000030746; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000030746}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000030746}. FT DOMAIN 7 283 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 760 AA; 87081 MW; 7D51AE5896C06584 CRC64; MKLNIDGLLV YFPYDYIYPE QYLYMLELKK SIDAQGHCVL EMPSGTGKTV SLLSLVLAYM KANPLEVTKL IYCSRTVPEL EKVVEELRNL VKFYETETGQ EQQILGLALS SRKNLCCHPE VSQSRDGKTV DGQCHQLTAS HIRQKHKHNT DIPVCSFYED FDAHGRDTPL PPGVYNLDDL REYGRTKGFC PYFLTRHAIH HANIVVYSYY YLLDPKIAEQ VSKELSKKAV VIFDEAHNID NVCIESMSVK ISKRTLERCS NNIESLDRHI KRVKEGDEKK LKEEYNRMVE GLREANIQRE TDVILANPVL PDEILQEAVP GTIRNAEHFL SFMKRFLEYL KSRLRIQHVV SESPPSFLKD CAQKICIDRK PLRFCAERLA SLMRTLELTD MENFSALILL SNFATLVSTY AKGFVLIIEP FDDRTPTISN PILYFSCMDA SIAIKPVFDR FQTVVITSGT LSPLDMYPKI LDFRPVTMAT FTMTLARTCI CPMIVSKGND QVAMSSKFET REDVAVIRNY GNLLVEMCGA VPDGIVSFFT SYIYMENVVG VWYEQGIIDQ IQKRKLLFIE TPDAAETSLA LLNYQKACEN GRGAVLLSVA RGKVSEGIDF DHHYGRAVIM FGIPYVYTQS RILKARLEYL REQYQIREND FLTFDAMRHA AQCVGRALRG KTDYGIMVFA DKRFARADKR GKLPRWIQEY LTDNLCNLST DEGLLVAKKF LRQMAQPFSR EDQLGLSLLT LEQLQAEDMQ KKLESKMQYL // ID V4KFS1_EUTSA Unreviewed; 601 AA. AC V4KFS1; DT 22-JAN-2014, integrated into UniProtKB/TrEMBL. DT 22-JAN-2014, sequence version 1. DT 13-APR-2016, entry version 15. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ESQ36610.1}; GN ORFNames=EUTSA_v10006888mg {ECO:0000313|EMBL:ESQ36610.1}; OS Eutrema salsugineum (Saltwater cress) (Sisymbrium salsugineum). OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; OC Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; OC Eutrema. OX NCBI_TaxID=72664 {ECO:0000313|EMBL:ESQ36610.1, ECO:0000313|Proteomes:UP000030689}; RN [1] {ECO:0000313|EMBL:ESQ36610.1, ECO:0000313|Proteomes:UP000030689} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RX PubMed=23518688; DOI=10.3389/fpls.2013.00046; RA Yang R., Jarvis D.E., Chen H., Beilstein M.A., Grimwood J., RA Jenkins J., Shu S., Prochnik S., Xin M., Ma C., Schmutz J., Wing R.A., RA Mitchell-Olds T., Schumaker K.S., Wang X.; RT "The Reference Genome of the Halophytic Plant Eutrema salsugineum."; RL Front. Plant Sci. 4:46-46(2013). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; KI517683; ESQ36610.1; -; Genomic_DNA. DR RefSeq; XP_006418257.1; XM_006418194.1. DR GeneID; 18994537; -. DR Proteomes; UP000030689; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:InterPro. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SUPFAM; SSF52540; SSF52540; 2. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW Complete proteome {ECO:0000313|Proteomes:UP000030689}; KW Reference proteome {ECO:0000313|Proteomes:UP000030689}. FT DOMAIN 7 285 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 601 AA; 68091 MW; B35A3E8ADB62167C CRC64; MIFKIEDVTV YFPYENIYPE QYEYMVELKR SLDAKGHCLL EMPTGTGKTI ALLSLITSYR LSRPDSPIKL VYCTRTVHEM EKTLAELKLL HEYQVRHLGS QAKILAIGLS SRKNLCVNPK VLAAENRDSV DAACRKRTAS WVRALSAENP NVELCDYFEN YEKAAENALL PPGVYTLEDL RTFGKNRGWC PYFLARHMVQ FANVIVYSYQ YLLDPKVAGI ISKELQKETV VVFDEAHNID NVCIEALSVS VRRVTLEGAN RNLNKIRQEI DRFKATDAGR LRAEYNRLVE GLALRGDLSG TDQWLANPAL PHDILKEAVP GNIRRAEHFV HVLRRLLQYL GGRLDTDNVE KESPVSFVSS LNSQAGIEQK TLKFCYDRLQ SLMLTLEITD TDDFLPIQTV CDFATLVGTY ARGFSIIIEP YDERMPHIPD PILQLSCHDA SLAIKPVFDR FQSVVITSGT LSPIDLYPRL LSFNPVVSRS FKMSMTRDCI CPMVLTRGSD QLPVSTKFDM RSDPGVVRNY GKFLVEMVSI VPDGVVCFFV SYSYMDGIIA TWNETGILKE IMQQKLVFIE TQDVVETTLA LDNYRRACDC GRGAVFFSVA R // ID V4KHY7_EUTSA Unreviewed; 660 AA. AC V4KHY7; DT 22-JAN-2014, integrated into UniProtKB/TrEMBL. DT 22-JAN-2014, sequence version 1. DT 11-MAY-2016, entry version 19. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ESQ30814.1}; GN ORFNames=EUTSA_v10011297mg {ECO:0000313|EMBL:ESQ30814.1}; OS Eutrema salsugineum (Saltwater cress) (Sisymbrium salsugineum). OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; OC Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; OC Eutrema. OX NCBI_TaxID=72664 {ECO:0000313|EMBL:ESQ30814.1, ECO:0000313|Proteomes:UP000030689}; RN [1] {ECO:0000313|EMBL:ESQ30814.1, ECO:0000313|Proteomes:UP000030689} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RX PubMed=23518688; DOI=10.3389/fpls.2013.00046; RA Yang R., Jarvis D.E., Chen H., Beilstein M.A., Grimwood J., RA Jenkins J., Shu S., Prochnik S., Xin M., Ma C., Schmutz J., Wing R.A., RA Mitchell-Olds T., Schumaker K.S., Wang X.; RT "The Reference Genome of the Halophytic Plant Eutrema salsugineum."; RL Front. Plant Sci. 4:46-46(2013). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; KI517809; ESQ30814.1; -; Genomic_DNA. DR RefSeq; XP_006393528.1; XM_006393466.1. DR GeneID; 18010463; -. DR Proteomes; UP000030689; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 2. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000030689}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000030689}. FT DOMAIN 7 243 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 660 AA; 75058 MW; 752B2C24D9FC9CE9 CRC64; MIFKIEDVTV CFPYDYIYPE QFEYMVELKR ALDAKGHCLL EMPTGTGKTI ALLSLITSYR LSRTDFPIKL VYCTRTVPQM EKTLAELKLL HDYQVRHLGD QAKILSIGLS SRKNLCVNPK VLAAAEENRD SVDAACRKRT ASWVRASENP NVQLYMVKFA NVIVCSYQYL LDPKVAGTIS KELQNESVVV FDEAHNIDNV CIDALSVTVR RFTLQGANRN LNKLRQEFYR FKASDAGRLQ AEYNRLVQGL ALRGDVSGTD QWLANPALPQ DILEEAVPGN IRRAEHFVHV LRWLLQYLEA RLDAENVEKE STVSFVSSLT SRAGIEQKTL KFCYDRLRSL MLTLEITEAD EFLPIQRVCD FATLVGTYAR GFSVITEPYE ERMPHVSDPI LQLSCHDASL AIKPVFDRFQ SVVITSGTLS PIDLYPRLLS FNPVVSRSFK MSMTRDCICP MVLTRGSDQL PVSTKFDMRS DPGVVRNYGK LLLEMVSIVP DGVVCFFISY SYMESIIATW NETGILHETR QQKLVFLESQ DAVETTSALD NYRRACDCGR GAVFFSVARG KVAEGIDFDR HYGRLVVMFG VPFQYTLSKI LLARLEYLRD TFQIKEDDFL TFDALRQIAQ CVGRVIRSKA DYGMMIFADK RYSRHDKRSK LPNLDTFASG // ID V4KTX1_EUTSA Unreviewed; 591 AA. AC V4KTX1; DT 22-JAN-2014, integrated into UniProtKB/TrEMBL. DT 22-JAN-2014, sequence version 1. DT 11-MAY-2016, entry version 18. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ESQ30813.1}; GN ORFNames=EUTSA_v10011297mg {ECO:0000313|EMBL:ESQ30813.1}; OS Eutrema salsugineum (Saltwater cress) (Sisymbrium salsugineum). OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; OC Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; OC Eutrema. OX NCBI_TaxID=72664 {ECO:0000313|EMBL:ESQ30813.1, ECO:0000313|Proteomes:UP000030689}; RN [1] {ECO:0000313|EMBL:ESQ30813.1, ECO:0000313|Proteomes:UP000030689} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RX PubMed=23518688; DOI=10.3389/fpls.2013.00046; RA Yang R., Jarvis D.E., Chen H., Beilstein M.A., Grimwood J., RA Jenkins J., Shu S., Prochnik S., Xin M., Ma C., Schmutz J., Wing R.A., RA Mitchell-Olds T., Schumaker K.S., Wang X.; RT "The Reference Genome of the Halophytic Plant Eutrema salsugineum."; RL Front. Plant Sci. 4:46-46(2013). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; KI517809; ESQ30813.1; -; Genomic_DNA. DR RefSeq; XP_006393527.1; XM_006393465.1. DR GeneID; 18010463; -. DR KEGG; eus:EUTSA_v10011297mg; -. DR KO; K10844; -. DR Proteomes; UP000030689; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 2. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 2. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000030689}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000030689}. FT DOMAIN 7 243 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 591 AA; 66932 MW; E8066DDCD44AD614 CRC64; MIFKIEDVTV CFPYDYIYPE QFEYMVELKR ALDAKGHCLL EMPTGTGKTI ALLSLITSYR LSRTDFPIKL VYCTRTVPQM EKTLAELKLL HDYQVRHLGD QAKILSIGLS SRKNLCVNPK VLAAAEENRD SVDAACRKRT ASWVRASENP NVQLYMVKFA NVIVCSYQYL LDPKVAGTIS KELQNESVVV FDEAHNIDNV CIDALSVTVR RFTLQGANRN LNKLRQEFYR FKASDAGRLQ AEYNRLVQGL ALRGDVSGTD QWLANPALPQ DILEEAVPGN IRRAEHFVHV LRWLLQYLEA RLDAENVEKE STVSFVSSLT SRAGIEQKTL KFCYDRLRSL MLTLEITEAD EFLPIQRVCD FATLVGTYAR GFSVITEPYE ERMPHVSDPI LQLSCHDASL AIKPVFDRFQ SVVITSGTLS PIDLYPRLLS FNPVVSRSFK MSMTRDCICP MVLTRGSDQL PVSTKFDMRS DPGVVRNYGK LLLEMVSIVP DGVVCFFISY SYMESIIATW NETGILHETR QQKLVFLESQ DAVETTSALD NYRRACDCGR GAVFFSVARG KVAEGIDFDR HYGRLVVMFG VPFQYTLSKG K // ID V4KZ34_EUTSA Unreviewed; 758 AA. AC V4KZ34; DT 22-JAN-2014, integrated into UniProtKB/TrEMBL. DT 22-JAN-2014, sequence version 1. DT 11-MAY-2016, entry version 21. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ESQ36609.1}; GN ORFNames=EUTSA_v10006888mg {ECO:0000313|EMBL:ESQ36609.1}; OS Eutrema salsugineum (Saltwater cress) (Sisymbrium salsugineum). OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; OC Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; OC Eutrema. OX NCBI_TaxID=72664 {ECO:0000313|EMBL:ESQ36609.1, ECO:0000313|Proteomes:UP000030689}; RN [1] {ECO:0000313|EMBL:ESQ36609.1, ECO:0000313|Proteomes:UP000030689} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RX PubMed=23518688; DOI=10.3389/fpls.2013.00046; RA Yang R., Jarvis D.E., Chen H., Beilstein M.A., Grimwood J., RA Jenkins J., Shu S., Prochnik S., Xin M., Ma C., Schmutz J., Wing R.A., RA Mitchell-Olds T., Schumaker K.S., Wang X.; RT "The Reference Genome of the Halophytic Plant Eutrema salsugineum."; RL Front. Plant Sci. 4:46-46(2013). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; KI517683; ESQ36609.1; -; Genomic_DNA. DR RefSeq; XP_006418256.1; XM_006418193.1. DR GeneID; 18994537; -. DR KEGG; eus:EUTSA_v10006888mg; -. DR KO; K10844; -. DR Proteomes; UP000030689; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000030689}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000030689}. FT DOMAIN 7 285 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 758 AA; 86211 MW; D540B605C40DB674 CRC64; MIFKIEDVTV YFPYENIYPE QYEYMVELKR SLDAKGHCLL EMPTGTGKTI ALLSLITSYR LSRPDSPIKL VYCTRTVHEM EKTLAELKLL HEYQVRHLGS QAKILAIGLS SRKNLCVNPK VLAAENRDSV DAACRKRTAS WVRALSAENP NVELCDYFEN YEKAAENALL PPGVYTLEDL RTFGKNRGWC PYFLARHMVQ FANVIVYSYQ YLLDPKVAGI ISKELQKETV VVFDEAHNID NVCIEALSVS VRRVTLEGAN RNLNKIRQEI DRFKATDAGR LRAEYNRLVE GLALRGDLSG TDQWLANPAL PHDILKEAVP GNIRRAEHFV HVLRRLLQYL GGRLDTDNVE KESPVSFVSS LNSQAGIEQK TLKFCYDRLQ SLMLTLEITD TDDFLPIQTV CDFATLVGTY ARGFSIIIEP YDERMPHIPD PILQLSCHDA SLAIKPVFDR FQSVVITSGT LSPIDLYPRL LSFNPVVSRS FKMSMTRDCI CPMVLTRGSD QLPVSTKFDM RSDPGVVRNY GKFLVEMVSI VPDGVVCFFV SYSYMDGIIA TWNETGILKE IMQQKLVFIE TQDVVETTLA LDNYRRACDC GRGAVFFSVA RGKVAEGIDF DRHYGRLVVM FGVPFQYTLS KILLARLEYL RDTFQIKEGD FLTFDALRQA AQCVGRVIRS KADYGMMIFA DKRYSRHDKR SKLPGWILSH LRDAHLNLST DMAIHIAREF LRKMAQPYDK AGTMGRKTLL TQEDLEKMAE TGVQDMAY // ID V5EF17_KALBG Unreviewed; 849 AA. AC V5EF17; DT 22-JAN-2014, integrated into UniProtKB/TrEMBL. DT 22-JAN-2014, sequence version 1. DT 11-MAY-2016, entry version 17. DE SubName: Full=DNA repair helicase {ECO:0000313|EMBL:EST09061.1}; GN ORFNames=PSEUBRA_SCAF13g01999 {ECO:0000313|EMBL:EST09061.1}; OS Kalmanozyma brasiliensis (strain GHG001) (Yeast) (Pseudozyma OS brasiliensis). OC Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; OC Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Kalmanozyma. OX NCBI_TaxID=1365824 {ECO:0000313|EMBL:EST09061.1, ECO:0000313|Proteomes:UP000019377}; RN [1] {ECO:0000313|Proteomes:UP000019377} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=GHG001 {ECO:0000313|Proteomes:UP000019377}; RX PubMed=24356824; DOI=10.1128/genomeA.00920-13; RA Oliveira J.V.D.C., dos Santos R.A.C., Borges T.A., Riano-Pachon D.M., RA Goldman G.H.; RT "Draft genome sequence of Pseudozyma brasiliensis sp. nov. strain RT GHG001, a high producer of endo-1,4-xylanase isolated from an insect RT pest of sugarcane."; RL Genome Announc. 1:E0092013-E0092013(2013). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; KI545855; EST09061.1; -; Genomic_DNA. DR EnsemblFungi; EST09061; EST09061; PSEUBRA_SCAF13g01999. DR Proteomes; UP000019377; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EST09061.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000019377}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EST09061.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EST09061.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EST09061.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000019377}. FT DOMAIN 7 319 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 849 AA; 96834 MW; 2D78B042CBC6B408 CRC64; MKFYIDELPV LFPYPKIYPE QYAYMTDLKR TLDANGHCVL EMPSGTGKTV SLLSLIVSYQ LFHPAKRKLI YCSRTVPEIE KALAELKRLM EYRARYNVKE GEESEVLKNE AEGSNGPGEH DIDMKGRGKA GGQMEDILAL GLSSRKNLCI HPDVSRERKG KVVDARCRDM TSSWACEKGR QDPGSVELCD FHEELGKMEP GQLIPQGVWT LEEVKEYARD KGICPYFAIR RMMPFVDIVI YSFHYLLDPK VAEQVSKEMS KDAIVVFDEA HNIDNVCIES LSIDLTRPML DSAYRSINQL SDRVDEIKRT DASKLQDEYA RLVEGLQEQG EQREAESFMA NPVLPDDLLQ EAIPGNIRRA EHFVAFLKRF VEYLKTRMRV LHVVAETPPS FLQHLKDITY IERKPLRFCA ERLRMLVGTL ELTRLDEFSA LQKVASFATL VATYDKGFLL ILEPFETENA TVPNPIFHFT CLDASLAIAP VFERFSSVII TSGTISPLDM YPKMLKFDAI VQESYAMTLT RQCFLPLVIT RGSDQVAISS RFEVRNDPAV VRNYGSILIE YAKCVPDGIV AFFPSYLYME SIVAAWHDMG ILDEVWKYKL IFIETPDAPE TSIALENYRR ACDNGRGAIL LSVARGKVSE GIDFDHNYGR AVIMFGVPYQ YTESRILKAR LEFLRDNFRI RENDFLTFDA MRHAAQCVGR VLRGKTDYGL MVFADKRFAR ADKRNKLPKW IAQYIKETHS NLSTDMAIVE SKLFIRSMAQ PYPEGKNGVS LWELSDIESR QAKERETFAK LMGGQLKVDA NGEVIDKDDS DSDMDGERVG KEEDDFDKEF GEGQDLAQMN ELDEVMQDV // ID V5GAX6_BYSSN Unreviewed; 802 AA. AC V5GAX6; DT 22-JAN-2014, integrated into UniProtKB/TrEMBL. DT 22-JAN-2014, sequence version 1. DT 11-MAY-2016, entry version 18. DE SubName: Full=TFIIH complex helicase Rad3, putative {ECO:0000313|EMBL:GAD98072.1}; GN ORFNames=PVAR5_6760 {ECO:0000313|EMBL:GAD98072.1}; OS Byssochlamys spectabilis (strain No. 5 / NBRC 109023) (Paecilomyces OS variotii). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; OC Eurotiomycetidae; Eurotiales; Thermoascaceae; Byssochlamys. OX NCBI_TaxID=1356009 {ECO:0000313|EMBL:GAD98072.1, ECO:0000313|Proteomes:UP000018001}; RN [1] {ECO:0000313|Proteomes:UP000018001} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=No. 5 / NBRC 109023 {ECO:0000313|Proteomes:UP000018001}; RX PubMed=24407650; DOI=10.1128/genomeA.01162-13; RA Oka T., Ekino K., Fukuda K., Nomura Y.; RT "Draft genome sequence of the formaldehyde-resistant fungus RT Byssochlamys spectabilis No. 5 (anamorph Paecilomyces variotii No. 5) RT (NBRC109023)."; RL Genome Announc. 2:E0116213-E0116213(2014). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:GAD98072.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; BAUL01000228; GAD98072.1; -; Genomic_DNA. DR EnsemblFungi; GAD98072; GAD98072; PVAR5_6760. DR Proteomes; UP000018001; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:GAD98072.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000018001}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:GAD98072.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:GAD98072.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:GAD98072.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000018001}. FT DOMAIN 7 295 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 248 275 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 802 AA; 91375 MW; 5E15CC723198290C CRC64; MKFFIDDLPV LFPYPRIYPE QYAYMCDLKK TLDAGGHCVL EMPSGTGKTV SLLSLIIAYQ QHYPEHRKLI YCSRTMSEIE KALTELKELM KYRTSQLGYT EDFRALGLTS RKNLCLHPSV KREKSGAVVD ARCRSLTASF VKEKKERGED VDLCIYHDNL DLLEPHDLVP PGVFTLDGLL KYGEQHKQCP YFSARRMMSF CNVIIYSYHY LLDPKIAERV SRELSKDCIV VFDEAHNIDN VCIESLSIDL TEDSLRKATR GASNLERKIQ EMKSSDAEKL QNEYSKLVEG LREAEEARDE DQFMANPVLP DDLLKEAVPG NIRRAEHFVA FLKRFIEYLK TRMKVTHTIS ETPPSFLTHL KDLTYIERKP LRFCAERLTS LVRTLELVNI EDYQPLQEVA TFATLAATYD KGFLLILEPF ESETATVPNP ILHFTCLDAA IAIKPVFDRF SSVIITSGTL SPLEMYPKML GFTTVLQESY SMTLARRSFL PMIVTRGSDQ AQISSSFQIR NDPGVVRNYG SLVLEFSRIT PDGVVVFFPS YLYMESIISM WQGMGILDSI WNYKLILVET PDSQESSLAL ETYRTACCNG RGAILFCVAR GKVSEGIDFD HHYGRAVICI GVPFQYTESR ILKARLEFLR ENYRIRENDF LSFDAMRHAA QCLGRVLRGK DDYGVMVLAD RRFQKKRTQL PKWINQAMLE SETNLSTDMA AATAKNFLRT MAQPFKAKDQ EGISTWSLTD LERHLQKQKL EEERLMREAA ANAPAGANGA NGVSNGAPTT TNAQRDEFDD DIDEELMLLD AD // ID V8N7D8_OPHHA Unreviewed; 377 AA. AC V8N7D8; DT 19-FEB-2014, integrated into UniProtKB/TrEMBL. DT 19-FEB-2014, sequence version 1. DT 11-MAY-2016, entry version 11. DE SubName: Full=TFIIH basal transcription factor complex helicase XPD subunit {ECO:0000313|EMBL:ETE58005.1}; DE Flags: Fragment; GN Name=Ercc2 {ECO:0000313|EMBL:ETE58005.1}; GN ORFNames=L345_16272 {ECO:0000313|EMBL:ETE58005.1}; OS Ophiophagus hannah (King cobra) (Naja hannah). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; OC Toxicofera; Serpentes; Colubroidea; Elapidae; Elapinae; Ophiophagus. OX NCBI_TaxID=8665 {ECO:0000313|EMBL:ETE58005.1, ECO:0000313|Proteomes:UP000018936}; RN [1] {ECO:0000313|EMBL:ETE58005.1, ECO:0000313|Proteomes:UP000018936} RP NUCLEOTIDE SEQUENCE. RC TISSUE=Blood {ECO:0000313|EMBL:ETE58005.1}; RX PubMed=24297900; DOI=10.1073/pnas.1314702110; RA Vonk F.J., Casewell N.R., Henkel C.V., Heimberg A.M., Jansen H.J., RA McCleary R.J., Kerkkamp H.M., Vos R.A., Guerreiro I., Calvete J.J., RA Wuster W., Woods A.E., Logan J.M., Harrison R.A., Castoe T.A., RA de Koning A.P., Pollock D.D., Yandell M., Calderon D., Renjifo C., RA Currier R.B., Salgado D., Pla D., Sanz L., Hyder A.S., Ribeiro J.M., RA Arntzen J.W., van den Thillart G.E., Boetzer M., Pirovano W., RA Dirks R.P., Spaink H.P., Duboule D., McGlinn E., Kini R.M., RA Richardson M.K.; RT "The king cobra genome reveals dynamic gene evolution and adaptation RT in the snake venom system."; RL Proc. Natl. Acad. Sci. U.S.A. 110:20651-20656(2013). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:ETE58005.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AZIM01007369; ETE58005.1; -; Genomic_DNA. DR Proteomes; UP000018936; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:InterPro. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000313|EMBL:ETE58005.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000018936}; KW Helicase {ECO:0000313|EMBL:ETE58005.1}; KW Hydrolase {ECO:0000313|EMBL:ETE58005.1}; KW Nucleotide-binding {ECO:0000313|EMBL:ETE58005.1}; KW Reference proteome {ECO:0000313|Proteomes:UP000018936}. FT DOMAIN 1 175 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT NON_TER 1 1 {ECO:0000313|EMBL:ETE58005.1}. SQ SEQUENCE 377 AA; 43080 MW; DE4ABD5A101F7961 CRC64; VIEELRKLVD FHEKQTGQKL PFLGLALSSR KNLCIHPEEF DAHGRQVPLP YGVYNLDDLK AYGQQKGWCP YFLARYSILH ANIVVYSYHY LLDPKIADVV SKELAKKSVG LREANIARET DVYLANPVLP DEILQEAVPG NIRTAEHFVA FLKRLLEYLK SRLRVHHVVQ ESPPSFLKDI FEKVCIERKP LRFCAERLRC LLRTLEIADI SDFSPITLIS NFATLVSTYS KGFTILIEPF DDRTPTVLNP ILHFSCMDAS IAIKPVFERF QTVIITSGTL SPLDMYPQIL DFRPVTMATF TMTLARTCLC PMIVGRGNDQ VTISSKFETR EDIAVIRNYG NLLLEMSAVV PDGIVAFFTS YQYMENIVAS WYEQELR // ID W0E7P7_9FIRM Unreviewed; 771 AA. AC W0E7P7; DT 19-MAR-2014, integrated into UniProtKB/TrEMBL. DT 19-MAR-2014, sequence version 1. DT 11-MAY-2016, entry version 12. DE SubName: Full=ATP-dependent helicase {ECO:0000313|EMBL:AHF06787.1}; GN ORFNames=DESME_06715 {ECO:0000313|EMBL:AHF06787.1}; OS Desulfitobacterium metallireducens DSM 15288. OC Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; OC Desulfitobacterium. OX NCBI_TaxID=871968 {ECO:0000313|EMBL:AHF06787.1, ECO:0000313|Proteomes:UP000010847}; RN [1] {ECO:0000313|EMBL:AHF06787.1, ECO:0000313|Proteomes:UP000010847} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=DSM 15288 {ECO:0000313|Proteomes:UP000010847}; RG DOE Joint Genome Institute; RA Smidt H., Huntemann M., Han J., Chen A., Kyrpides N., Mavromatis K., RA Markowitz V., Palaniappan K., Ivanova N., Schaumberg A., Pati A., RA Liolios K., Nordberg H.P., Cantor M.N., Hua S.X., Woyke T.; RL Submitted (DEC-2013) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP007032; AHF06787.1; -; Genomic_DNA. DR RefSeq; WP_006715536.1; NZ_CP007032.1. DR EnsemblBacteria; AHF06787; AHF06787; DESME_06715. DR KEGG; dmt:DESME_06715; -. DR Proteomes; UP000010847; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 4. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR001650; Helicase_C. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF00270; DEAD; 1. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. DR PROSITE; PS51194; HELICASE_CTER; 1. PE 4: Predicted; KW ATP-binding {ECO:0000313|EMBL:AHF06787.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000010847}; KW Helicase {ECO:0000313|EMBL:AHF06787.1}; KW Hydrolase {ECO:0000313|EMBL:AHF06787.1}; KW Nucleotide-binding {ECO:0000313|EMBL:AHF06787.1}; KW Reference proteome {ECO:0000313|Proteomes:UP000010847}. FT DOMAIN 177 433 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT DOMAIN 577 765 Helicase C-terminal. FT {ECO:0000259|PROSITE:PS51194}. SQ SEQUENCE 771 AA; 89437 MW; E71623049E6982E7 CRC64; MRVSVRELVE FVLRSGDLQS TANGPSRTLE GIKAHQFIQK AYGQEYQPEV SLSYVYEQDD RKLEIHGRAD GIIQKESGIC IDEIKSTTRN FEQWEESFSD IHWAQVKCYA YIYAFQVGLK SIEVQLTYYQ LNSGESQIFT RSYSIEDLED FFIKVVDSYL QWAKKIESWT EARDLSIRSL EFPYPSYRSG QRKLVIAVYK TIEQGKKLFA QAPTGIGKTI ATLFPALKSL AEGLTSELFY LTAKTMTRTV AEKALSDLQE QGLRIKRLTL TAKDKICFLP DSTCDPEECP YARGYYDRVR LAVEEIFNED SWNRAMIENY SRNHSVCPFE FSLDLTNWAD VVICDYNYVF DPRVYLRRLF LEGGDYLFLV DEAHNLVERA REMFSAEIVK EPFLKLKREV QTEFPLLGKK LQKVNAQLGK LKKERAEDFQ KDPPTGLYSS LQQFIKVAES FLREEKSVPW KDEFLDLYFK TLGFLRTAEY YDERYNTLYK QGQEGFSVKL YCLDPSLLLA ESFKRGRAAI LFSATLSPIE YFMKILGGEE SSYKLKLGSP FPQQNLCLMI HEGISTRYSQ RDMSYDQLAE AIAIVVKSKI GNYLIFFPSY VYLQHVYERF ELNNPEIHTI VQTSGMTEEE REVFLDQFQE DPERTFVGFS LLGGIFGEGI DLTGSRLSGA VIVGVGLPQI CLERDLIRDY FQTRLKRGFE YAYMYPGLNK VLQAVGRVIR TEQDRGVVLL VDDRFARSSY QKLFPPEWQP LRYISNLQTI EEQSRVFWNE S // ID W1PQJ6_AMBTC Unreviewed; 762 AA. AC W1PQJ6; DT 19-MAR-2014, integrated into UniProtKB/TrEMBL. DT 19-MAR-2014, sequence version 1. DT 11-MAY-2016, entry version 20. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ERN12302.1}; GN ORFNames=AMTR_s00025p00038580 {ECO:0000313|EMBL:ERN12302.1}; OS Amborella trichopoda. OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; basal Magnoliophyta; Amborellales; OC Amborellaceae; Amborella. OX NCBI_TaxID=13333 {ECO:0000313|EMBL:ERN12302.1, ECO:0000313|Proteomes:UP000017836}; RN [1] {ECO:0000313|Proteomes:UP000017836} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RX PubMed=24357323; RG Amborella Genome Project; RT "The Amborella genome and the evolution of flowering plants."; RL Science 342:1241089-1241089(2013). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; KI392614; ERN12302.1; -; Genomic_DNA. DR RefSeq; XP_006850721.1; XM_006850658.2. DR EnsemblPlants; ERN12302; ERN12302; AMTR_s00025p00038580. DR GeneID; 18440516; -. DR Gramene; ERN12302; ERN12302; AMTR_s00025p00038580. DR KEGG; atr:18440516; -. DR KO; K10844; -. DR OMA; DEVWKYK; -. DR Proteomes; UP000017836; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0000724; P:double-strand break repair via homologous recombination; IEA:EnsemblPlants. DR GO; GO:0010286; P:heat acclimation; IEA:EnsemblPlants. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR GO; GO:0045893; P:positive regulation of transcription, DNA-templated; IEA:EnsemblPlants. DR GO; GO:0043687; P:post-translational protein modification; IEA:EnsemblPlants. DR GO; GO:0006457; P:protein folding; IEA:EnsemblPlants. DR GO; GO:0009644; P:response to high light intensity; IEA:EnsemblPlants. DR GO; GO:0042542; P:response to hydrogen peroxide; IEA:EnsemblPlants. DR GO; GO:0010212; P:response to ionizing radiation; IEA:EnsemblPlants. DR GO; GO:0009411; P:response to UV; IEA:EnsemblPlants. DR GO; GO:0000394; P:RNA splicing, via endonucleolytic cleavage and ligation; IEA:EnsemblPlants. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:EnsemblPlants. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR006935; Helicase/UvrB_N. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR Pfam; PF04851; ResIII; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000017836}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000017836}. FT DOMAIN 7 290 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 762 AA; 86381 MW; 51092B22D462EA58 CRC64; MKFKIDELTV YFPYEHIYPE QYEYMVELKH ALDAKGHCLL EMPTGTGKTI TLLSLITSYL LSSNQSNGIK KLIYCTRTVH EMEKVLAELR LLHEFQLSQL GPSARLLALG LSSRKNLCIN PSVNSASSRD SVDAGCRKLT ASWVRALAAD NPNIPMCQFY EKYDREASSS EGVLLPPGVY TLQDLRAYGR EKGWCPYFLA RHMIRFANVV VYNYQYLLDP KVAGIISREM QRECIVVFDE AHNIDNVCIE ALSVNIRQQT LDGATRNLKK IAQTIEKFKA TDANRLRSEY NRLVEGLAHR GNLPVTDSWL SNPVLPEDIL REAVPGSIRK AEHFLGVLRR LVQYLDGRLQ TENVETEGPV AFVASISTQA GIDQKILKFC YDRLHSLLLT LEIAETDEFL HIQTVCDFAT LVATYSHGFS IIIEPFDERM PHVPDPILQL SCLDASLAIK PVFERFQSVV ITSGTLSPVD LYPRLLKFNP VVSQSFTMSL TRDCLCPMVL TRGSDQLPVS TKFDMRSDPG VVRNYGRLLL EMVAAVPDGI VCFFVSYSYM DGIVNSWNEM GILQDVMQHK LVFIETQDVV ETTLALDNYR KACDCGRGAV FFSVARGKVA EGIDFDRHYG RLVIMFGVPF QYTLSRILLA RLEYLRETFQ IKEGDFLTFD AVRQAAQCVG RVIRSKSDYG MMIFADKRYS RHDKRSKLPG WILSHLHDAH LNLSTDMALH IAREFLRKMA QPYDKSGGGS GKKTLLSQED LEKMERTMGM MF // ID W1QF79_OGAPD Unreviewed; 724 AA. AC W1QF79; DT 19-MAR-2014, integrated into UniProtKB/TrEMBL. DT 19-MAR-2014, sequence version 1. DT 11-MAY-2016, entry version 18. DE SubName: Full=DNA repair helicase RAD3 {ECO:0000313|EMBL:ESX00213.1}; DE EC=3.6.4.12 {ECO:0000313|EMBL:ESX00213.1}; GN ORFNames=HPODL_01089 {ECO:0000313|EMBL:ESX00213.1}; OS Ogataea parapolymorpha (strain DL-1 / ATCC 26012 / NRRL Y-7560) OS (Yeast) (Hansenula polymorpha). OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; OC Saccharomycetes; Saccharomycetales; Pichiaceae; Ogataea. OX NCBI_TaxID=871575 {ECO:0000313|EMBL:ESX00213.1, ECO:0000313|Proteomes:UP000008673}; RN [1] {ECO:0000313|EMBL:ESX00213.1, ECO:0000313|Proteomes:UP000008673} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 26012 / NRRL Y-7560 / DL-1 RC {ECO:0000313|Proteomes:UP000008673}; RA Ravin N.V., Mardanov A.V., Eldarov M.A., Kadnikov V.V., Beletsky A.V., RA Zvereva M.I., Smekalova E.M., Dontsova O.A., Skryabin K.G.; RT "Genome sequence of the methylotrophic yeast Hansenula polymorpha RT DL1."; RL Submitted (OCT-2013) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:ESX00213.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AEOI02000006; ESX00213.1; -; Genomic_DNA. DR RefSeq; XP_013935019.1; XM_014079544.1. DR EnsemblFungi; ESX00213; ESX00213; HPODL_01089. DR GeneID; 25770554; -. DR Proteomes; UP000008673; Chromosome IV. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:ESX00213.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000008673}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:ESX00213.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:ESX00213.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:ESX00213.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000008673}. FT DOMAIN 1 244 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 724 AA; 83261 MW; 791A214D98A7AECC CRC64; MPSGTGKTIS LLSLTVAYQM HYPEHRKIVY CSRTMSEIEK ALIELHKLME YRSKELGFVE DFRGLGLTSR KNLCLHPVAS RERKGVVVDE MCRRMTNGQL KARIEQGQAS TDQLCSFHEK LYEKDPANLV PPGVYSFEQL MKYCKMEGTC PYFTIRRMMP FCNIIIYSYH YLLDPKIAER VSKELSRDSI IIFDEAHNID NVCIESLSLD LTEDVLRRAS KGANALARKV EEVKKTDSKR LQDEYEKLVE GLRESEIYHT DEDAFMVNPV LPDDVLTEAV PGSIRRAEHF ISFLKRFIEY LKTRMKVLHV ISETPVSFLQ HLKQLTFIDR KPLRFCSERL SLLVRTLEVV EIEEFMALKD IATFGTLVST YDTGFVLILE PYETENATVP NPILRFACLD ASIAMKPIFE RFSSVIITSG TISPLDMYPR MLNFETVVQE SYTMTLDRRS FLPMVVTKGS DQVAISSRFE IRNDPSVVRN YGTLLIEFSK ITPDGMVVFF PSYLYMESII SQWQTMGILD EVWKYKLILV ETPDAQETSL ALETYRKACS NGRGAVLLSV ARGKVSEGID FDHHYGRTVL MIGIPFQYTE SRILKARLEF LRDHYQIREN DFLSFDAMRH AAQCLGRVLR GKDDYGVMVL ADRRFAKKKS QLPKWIAQAL SDADINLSTD MAIASAKKFL RTLAQPIEQK DQEQGVSVWT LDQLEKYQKE QNERFSVTNI EIQG // ID W4WQT5_ATTCE Unreviewed; 730 AA. AC W4WQT5; DT 19-MAR-2014, integrated into UniProtKB/TrEMBL. DT 19-MAR-2014, sequence version 1. DT 11-MAY-2016, entry version 21. DE SubName: Full=Uncharacterized protein {ECO:0000313|EnsemblMetazoa:ACEP21556-PA}; OS Atta cephalotes (Leafcutter ant). OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; OC Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; OC Vespoidea; Formicidae; Myrmicinae; Atta. OX NCBI_TaxID=12957 {ECO:0000313|EnsemblMetazoa:ACEP21556-PA, ECO:0000313|Proteomes:UP000005205}; RN [1] {ECO:0000313|EnsemblMetazoa:ACEP21556-PA} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RX PubMed=21347285; DOI=10.1371/journal.pgen.1002007; RA Suen G., Teiling C., Li L., Holt C., Abouheif E., Bornberg-Bauer E., RA Bouffard P., Caldera E.J., Cash E., Cavanaugh A., Denas O., Elhaik E., RA Fave M.J., Gadau J., Gibson J.D., Graur D., Grubbs K.J., Hagen D.E., RA Harkins T.T., Helmkampf M., Hu H., Johnson B.R., Kim J., Marsh S.E., RA Moeller J.A., Munoz-Torres M.C., Murphy M.C., Naughton M.C., Nigam S., RA Overson R., Rajakumar R., Reese J.T., Scott J.J., Smith C.R., Tao S., RA Tsutsui N.D., Viljakainen L., Wissler L., Yandell M.D., Zimmer F., RA Taylor J., Slater S.C., Clifton S.W., Warren W.C., Elsik C.G., RA Smith C.D., Weinstock G.M., Gerardo N.M., Currie C.R.; RT "The genome sequence of the leaf-cutter ant Atta cephalotes reveals RT insights into its obligate symbiotic lifestyle."; RL PLoS Genet. 7:e1002007-e1002007(2011). RN [2] {ECO:0000313|EnsemblMetazoa:ACEP21556-PA} RP IDENTIFICATION. RG EnsemblMetazoa; RL Submitted (JUN-2015) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR STRING; 12957.ACEP_00005096-PA; -. DR EnsemblMetazoa; ACEP21556-RA; ACEP21556-PA; ACEP21556. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR OMA; DEVWKYK; -. DR Proteomes; UP000005205; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 5. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000005205}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000005205}. FT DOMAIN 7 291 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 256 298 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 730 AA; 84015 MW; 1CDA65DB4FF7D0D9 CRC64; MKISVDGLIV YFPYDYIYPE QYAYMLELKR GLDAKGHCLL EMPSGTGKTI TLLSLIVAYM LEHPLDVTKL IYCSRTVPEI EKVIEELKKL IDYYEKETKS KPKIVGLVLS SRKNMCIHPE VSREREGKIV DGRCHSLTAS YVRERHNYDE STPICNFYEG FDMEGREQIM PPGIYSIDDL KEYGKDRNWC PYFLARFTIL HAQIVVYSYH YLLDPKIAET VSKELSRSSI VIFDEAHNID NVCIDSMSVK INRKTMEKST ANIQLLEKTV AEMRQEDVNK LKEEYERLVE GLRDAQFQRE TDVILANPIL PNEILEEVIP GNIRNAEHFV SFLKRFVEYL KTRLRVQHVV QESPAAFLKD IQAKVAIERK PLRFCAQRLA SLLRTMEITD LTDFSPIILV THLATLVSTY THGFTIIVEP FDDKTPTVLN PILHFSCLDS SIAIKPIFDR FQSVVITSGT LSPLDMYPKV LNFHPVIMSS FTMTLARPCL LPMIVAKGND QVAISSKYET REDVAVIRNY GQLYDQGVVD QLQRHKLLFI ETQDSAETSL ALINYIKACE NGRGAVLLSV ARGKVSEGVD FDHHLGRAVL MFGIPYVYTQ SRILKARLEY LRDQFQIREN DFLTFDAMRH AAQCVGRAIR GKTDYGIMVF ADKRFSRIDK RSKLPKWIQE HLNDSLCNLS TEEAIQISKR WLRQMAQPFT RENQLGLSLL TREQLEKEEA AKIEQKAQQN // ID W4Z4U6_STRPU Unreviewed; 696 AA. AC W4Z4U6; DT 19-MAR-2014, integrated into UniProtKB/TrEMBL. DT 19-MAR-2014, sequence version 1. DT 11-MAY-2016, entry version 22. DE SubName: Full=Uncharacterized protein {ECO:0000313|EnsemblMetazoa:SPU_023149-tr}; GN Name=Sp-Ercc2_1 {ECO:0000313|EnsemblMetazoa:SPU_023149-tr}; OS Strongylocentrotus purpuratus (Purple sea urchin). OC Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; OC Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; OC Strongylocentrotus. OX NCBI_TaxID=7668 {ECO:0000313|EnsemblMetazoa:SPU_023149-tr, ECO:0000313|Proteomes:UP000007110}; RN [1] {ECO:0000313|EnsemblMetazoa:SPU_023149-tr} RP IDENTIFICATION. RG EnsemblMetazoa; RL Submitted (JUN-2015) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AAGJ04079630; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR STRING; 7668.SPU_023149tr; -. DR EnsemblMetazoa; SPU_023149-tr; SPU_023149-tr; SPU_023149. DR eggNOG; KOG1131; Eukaryota. DR eggNOG; COG1199; LUCA. DR OMA; DEVWKYK; -. DR Proteomes; UP000007110; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 2. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000007110}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000007110}. FT DOMAIN 31 309 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 101 124 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 696 AA; 79043 MW; B990D1B108FD046E CRC64; MHAHASFQPK PRFLPVRQAR HARGLRVNVD GLLVHFPYDY IYPEQFMYMM ELKKLLDAKG HGVLEMPSGT GKTVSLLALI VAYIQANPHE LTKLIYCSRT VPEIEKAVEE LRRLLDYIEE QTGEKPNFVG LALSSRKNLC IHPEVSKERI GKVVDSKCHS LTASYIRERR KHDPAVPICD FYEEFDAAGR DSPIEPGAYS LDDLKEIGRQ NGWCPYFLAR YTITHANIIV YSYHYLLDPK IAEQVSKELS KQSAVIFDEA HNIDNVCIES MSVNISRKTL DKSNQNLDSL TRHINRIKDT DAQRLREEYQ RLVDGLREAS RARETDVHLS NPALPDEVLD EAVPGNIRTA EHFIGFLRRF VEYLKTRLRV QHVISETPAS FLKDVFSKVC IERKPLRFCA ERLHSLLRTL ELTDVQDNMS PLVAVSGFAT LVSTYTKGFS LIIEPFDDKT PTISNPVLHF SCMDASIAIK PVFDRFQSVV ITSGTLSPLD MYPKILDFRP VSMASFSMTL SRSSICPIIV ARGNDQVTIS SRFESREDVA VIRNYGNLIV ELSGIVPDGI VAFFTSYTYM ESVVATWYEQ GIIDSIQKNK LLFIETQDAA ETSIALNNYH KACENGRGAI LLSVARGKVS EGIDFDHHYG RAVIMLGIPY VYTQSRILKA RLEYLRDQYQ IKENDFLTFD AMRHAAQVCY ELCIVG // ID W4ZXL0_WHEAT Unreviewed; 758 AA. AC W4ZXL0; DT 19-MAR-2014, integrated into UniProtKB/TrEMBL. DT 19-MAR-2014, sequence version 1. DT 11-MAY-2016, entry version 22. DE SubName: Full=Uncharacterized protein {ECO:0000313|EnsemblPlants:Traes_1AS_A25EED9EA.1}; OS Triticum aestivum (Wheat). OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; OC Pooideae; Triticodae; Triticeae; Triticinae; Triticum. OX NCBI_TaxID=4565 {ECO:0000313|EnsemblPlants:Traes_1AS_A25EED9EA.1, ECO:0000313|Proteomes:UP000019116}; RN [1] {ECO:0000313|EnsemblPlants:Traes_1AS_A25EED9EA.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=cv. Chinese Spring RC {ECO:0000313|EnsemblPlants:Traes_1AS_A25EED9EA.1}; RX PubMed=23192148; DOI=10.1038/nature11650; RA Brenchley R., Spannagl M., Pfeifer M., Barker G.L., D'Amore R., RA Allen A.M., McKenzie N., Kramer M., Kerhornou A., Bolser D., Kay S., RA Waite D., Trick M., Bancroft I., Gu Y., Huo N., Luo M.C., Sehgal S., RA Gill B., Kianian S., Anderson O., Kersey P., Dvorak J., McCombie W.R., RA Hall A., Mayer K.F., Edwards K.J., Bevan M.W., Hall N.; RT "Analysis of the bread wheat genome using whole-genome shotgun RT sequencing."; RL Nature 491:705-710(2012). RN [2] {ECO:0000313|EnsemblPlants:Traes_1AS_A25EED9EA.1} RP IDENTIFICATION. RG EnsemblPlants; RL Submitted (JUN-2015) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EnsemblPlants; Traes_1AS_A25EED9EA.1; Traes_1AS_A25EED9EA.1; Traes_1AS_A25EED9EA. DR Gramene; Traes_1AS_A25EED9EA.1; Traes_1AS_A25EED9EA.1; Traes_1AS_A25EED9EA. DR OMA; DEVWKYK; -. DR Proteomes; UP000019116; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0000724; P:double-strand break repair via homologous recombination; IEA:EnsemblPlants. DR GO; GO:0010286; P:heat acclimation; IEA:EnsemblPlants. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR GO; GO:0045893; P:positive regulation of transcription, DNA-templated; IEA:EnsemblPlants. DR GO; GO:0043687; P:post-translational protein modification; IEA:EnsemblPlants. DR GO; GO:0006457; P:protein folding; IEA:EnsemblPlants. DR GO; GO:0009644; P:response to high light intensity; IEA:EnsemblPlants. DR GO; GO:0042542; P:response to hydrogen peroxide; IEA:EnsemblPlants. DR GO; GO:0010212; P:response to ionizing radiation; IEA:EnsemblPlants. DR GO; GO:0009411; P:response to UV; IEA:EnsemblPlants. DR GO; GO:0000394; P:RNA splicing, via endonucleolytic cleavage and ligation; IEA:EnsemblPlants. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:EnsemblPlants. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000019116}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000019116}. FT DOMAIN 7 288 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 758 AA; 85671 MW; FD7E683A08F04372 CRC64; MKFDLEGLTV HFPYAAIYPE QHAYMGELKR ALDARGHALL EMPTGTGKTA ALISLITSYS LANPSRPLRL LYCTRTVHEM EKTLAELRLL FSHLPPAASR SLLALGLSSR KNLCVHPQAS ASAARDSVDT ACRRLTASWV RDKAASDPES TPLCEYFESF DRAAAAGDLA SFMPPGVYTL ADLRSLGRER RICPYFLARQ MVKYANVVVY SYQYLLDPKV ASIVSREMQK ECVVVFDEAH NIDNVCIEAL SVSVRKQTLE GAERNLRRIS QEIDRFKATD ANRLRAEYNR LVDGLAQRGN LPISDAWLAN PSLPDDILKE AVPGNIRKAE HFLAVLKRLV RFLDGRLETE NVENEMPVSF VASIHSQAGI DQRMLRFCYD RLHSLLLTLE ITDTDEFMHI QTICDFATLI GTYSRGFSII IEPYDDRMPE VRDPVIQLSC HDASLAIQPV FDRFQTVVIT SGTLSPIDLY PRLLNFNPVI SRSFTMSLTR DCICPMVLTR GSDQLPVSTK FDMRSDPGVV RNYGRLLLEM ASSVPDGIVC FFVSYSYMDG IVNSWNEMGI LQDIMQHKLV FIETPDVVET TLALDNYRKA CDCGRGAIFF SVARGKVAEG IDFDRHYGRL VIMFGVPFQY TLSKILRARL EYLRETFQIK EGDFLTFDAL RQAAQCVGRV IRSKADYGMM IFADKRYSRH DKRSKLPGWI LSHLHDAHLN LSTDMALHTA REFLRRMAQP YDKAGSGGKK TLLTEEDLQD MARDAMEM // ID W5AAN9_WHEAT Unreviewed; 565 AA. AC W5AAN9; DT 19-MAR-2014, integrated into UniProtKB/TrEMBL. DT 19-MAR-2014, sequence version 1. DT 13-APR-2016, entry version 18. DE SubName: Full=Uncharacterized protein {ECO:0000313|EnsemblPlants:Traes_1BS_A796D1236.1}; OS Triticum aestivum (Wheat). OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; OC Pooideae; Triticodae; Triticeae; Triticinae; Triticum. OX NCBI_TaxID=4565 {ECO:0000313|EnsemblPlants:Traes_1BS_A796D1236.1, ECO:0000313|Proteomes:UP000019116}; RN [1] {ECO:0000313|EnsemblPlants:Traes_1BS_A796D1236.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=cv. Chinese Spring RC {ECO:0000313|EnsemblPlants:Traes_1BS_A796D1236.1}; RX PubMed=23192148; DOI=10.1038/nature11650; RA Brenchley R., Spannagl M., Pfeifer M., Barker G.L., D'Amore R., RA Allen A.M., McKenzie N., Kramer M., Kerhornou A., Bolser D., Kay S., RA Waite D., Trick M., Bancroft I., Gu Y., Huo N., Luo M.C., Sehgal S., RA Gill B., Kianian S., Anderson O., Kersey P., Dvorak J., McCombie W.R., RA Hall A., Mayer K.F., Edwards K.J., Bevan M.W., Hall N.; RT "Analysis of the bread wheat genome using whole-genome shotgun RT sequencing."; RL Nature 491:705-710(2012). RN [2] {ECO:0000313|EnsemblPlants:Traes_1BS_A796D1236.1} RP IDENTIFICATION. RG EnsemblPlants; RL Submitted (JUN-2015) to UniProtKB. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EnsemblPlants; Traes_1BS_A796D1236.1; Traes_1BS_A796D1236.1; Traes_1BS_A796D1236. DR Gramene; Traes_1BS_A796D1236.1; Traes_1BS_A796D1236.1; Traes_1BS_A796D1236. DR OMA; CIGYLAK; -. DR Proteomes; UP000019116; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:InterPro. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SUPFAM; SSF52540; SSF52540; 2. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW Complete proteome {ECO:0000313|Proteomes:UP000019116}; KW Reference proteome {ECO:0000313|Proteomes:UP000019116}. FT DOMAIN 7 288 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 565 AA; 63462 MW; 0A129680802AC83E CRC64; MKFDLEGLTV HFPYAAIYPE QHAYMGELKR ALDARGHALL EMPTGTGKTA ALISLITSYS LANPSRPLRL LYCTRTVHEM EKTLAELRLL FSHLPPAASR SLLALGLSSR KNLCVHPQAS ASAARDSVDT ACRRLTASWV RDKAASDPES TPLCEFFESF DRAAAAGDLA SFMPPGVYTL ADLRSLGRER RICPYFLARQ MVKYANVVVY SYQYLLDPKV ASIVSREMQK ECVVVFDEAH NIDNVCIEAL SVSVRKQTLE GAERNLRRIS QEIDRFKATD ANRLRAEYNR LVDGLAQRGN LPISDAWLAN PSLPDDILKE AVPGNIRKAE HFLAVLKRLV KFLDGRLETE NVENEMPVSF VASIHSQAGI DQRMLRFCYD RLHSLLLTLE ITDTDEFMHI QTICDFATLI GTYSRGFSII IEPYDDRMPE VRDPVIQLSC HDASLAIQPV FDRFQTVVIT SGTLSPIDLY PRLLNFNPVI SRSFTMSLTR DCICPMVLTR GSDQLPVSTK FDMRSDPGVV RNYGRLLLEM ASSVPDGIVC FFVSYSYMDG IVNSWNEMGI LQVLF // ID W5J778_ANODA Unreviewed; 760 AA. AC W5J778; DT 19-MAR-2014, integrated into UniProtKB/TrEMBL. DT 19-MAR-2014, sequence version 1. DT 11-MAY-2016, entry version 20. DE SubName: Full=DNA repair helicase rad3/xp-d {ECO:0000313|EMBL:ETN59831.1}; DE SubName: Full=Uncharacterized protein {ECO:0000313|EnsemblMetazoa:ADAC008565-PA}; GN ORFNames=AND_008565 {ECO:0000313|EMBL:ETN59831.1}; OS Anopheles darlingi (Mosquito). OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; OC Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; OC Culicidae; Anophelinae; Anopheles. OX NCBI_TaxID=43151 {ECO:0000313|EMBL:ETN59831.1, ECO:0000313|Proteomes:UP000000673}; RN [1] {ECO:0000313|EMBL:ETN59831.1, ECO:0000313|EnsemblMetazoa:ADAC008565-PA, ECO:0000313|Proteomes:UP000000673} RP NUCLEOTIDE SEQUENCE. RX PubMed=20920257; DOI=10.1186/1471-2164-11-529; RA Mendes N.D., Freitas A.T., Vasconcelos A.T., Sagot M.F.; RT "Combination of measures distinguishes pre-miRNAs from other stem- RT loops in the genome of the newly sequenced Anopheles darlingi."; RL BMC Genomics 11:529-529(2010). RN [2] {ECO:0000313|EMBL:ETN59831.1} RP NUCLEOTIDE SEQUENCE. RA Almeida L.G., Nicolas M.F., Souza R.C., Vasconcelos A.T.R.; RL Submitted (MAY-2010) to the EMBL/GenBank/DDBJ databases. RN [3] {ECO:0000313|EMBL:ETN59831.1} RP NUCLEOTIDE SEQUENCE. RX PubMed=23761445; RA Marinotti O., Cerqueira G.C., de Almeida L.G., Ferro M.I., RA Loreto E.L., Zaha A., Teixeira S.M., Wespiser A.R., RA Almeida E Silva A., Schlindwein A.D., Pacheco A.C., Silva A.L., RA Graveley B.R., Walenz B.P., Lima Bde A., Ribeiro C.A., RA Nunes-Silva C.G., de Carvalho C.R., Soares C.M., de Menezes C.B., RA Matiolli C., Caffrey D., Araujo D.A., de Oliveira D.M., Golenbock D., RA Grisard E.C., Fantinatti-Garboggini F., de Carvalho F.M., RA Barcellos F.G., Prosdocimi F., May G., Azevedo Junior G.M., RA Guimaraes G.M., Goldman G.H., Padilha I.Q., Batista Jda S., RA Ferro J.A., Ribeiro J.M., Fietto J.L., Dabbas K.M., Cerdeira L., RA Agnez-Lima L.F., Brocchi M., de Carvalho M.O., Teixeira Mde M., RA Diniz Maia Mde M., Goldman M.H., Cruz Schneider M.P., Felipe M.S., RA Hungria M., Nicolas M.F., Pereira M., Montes M.A., Cantao M.E., RA Vincentz M., Rafael M.S., Silverman N., Stoco P.H., Souza R.C., RA Vicentini R., Gazzinelli R.T., Neves Rde O., Silva R., RA Astolfi-Filho S., Maciel T.E., Urmenyi T.P., Tadei W.P., Camargo E.P., RA de Vasconcelos A.T.; RT "The genome of Anopheles darlingi, the main neotropical malaria RT vector."; RL Nucleic Acids Res. 41:7387-7400(2013). RN [4] {ECO:0000313|EnsemblMetazoa:ADAC008565-PA} RP IDENTIFICATION. RG EnsemblMetazoa; RL Submitted (JUN-2015) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ADMH02002036; ETN59831.1; -; Genomic_DNA. DR EnsemblMetazoa; ADAC008565-RA; ADAC008565-PA; ADAC008565. DR OMA; DEVWKYK; -. DR Proteomes; UP000000673; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 6. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:ETN59831.1}; KW Complete proteome {ECO:0000313|Proteomes:UP000000673}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:ETN59831.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:ETN59831.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:ETN59831.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000000673}. FT DOMAIN 7 283 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 760 AA; 87222 MW; 39DC0A3C17958AC8 CRC64; MRISVDGLLV YFPYEYIYPE QYAYMLELKR TFDAKGHCLL EMPSGTGKTT TLLSLTVAYI LENPHIVRKL IYCSRTVPEI EKVIAELKHL MNYYEKQTGT MPNITGLVLS SRKNMCIHPE VSREREGKIV DARCYGMTAS YVRERAAHDE TAPVCQYYEG FQAEGKESML PAGVYSIDDL KEFGRERNWC PYFLSRFAIN QAHVVVYSYY YLLDPKVAEV VSKELTRESV VVCDEAHNID NVCVDSMSVK INKRLIERST TGIHNLEQKI SELKEDDKRR LNDEYTRLVQ GLKDASFARE TDMVVANPVL PNEILREVVP GNIRNADHFL SFLKRFIEYI KSRLRVQHVV QESPAGFLRD VQRQVCIERK PLRFCADRLQ SLLRTLEITD LSEYGPLSVI TSFATLVSTY TKGFTIIIEP FDDKTPTVPN PILHFSCLDS SIAMKPIFQR FQSVVITSGT LSPMDMYPKI LDFEPVVMSS FTMTLARPCL LPMIVARGND QVAISSRFET REDTAVTRNY GQLLVETAKT VPDGIVCFFT SYLYLESVVA SWYDQGIIDT LLRYKLLFIE TQDNAETSYA LMNYVKACEC GRGAVLLAVA RGKVSEGVDF DHHLGRAVLM FGIPYVYTQS RILKARLDYL RDQFQIREND FLTFDALRHA AQCVGRAIRG KTDYGIMIFA DKRFSRQDKR GKLPKWIQEH LTDNLSNLST EESMQLAKRW LRQMAQPFTR EDQLGVSLLT LEQLQSMERE KLEKQAQGKK // ID W5KNZ0_ASTMX Unreviewed; 760 AA. AC W5KNZ0; DT 16-APR-2014, integrated into UniProtKB/TrEMBL. DT 16-APR-2014, sequence version 1. DT 11-MAY-2016, entry version 19. DE SubName: Full=Uncharacterized protein {ECO:0000313|Ensembl:ENSAMXP00000009302}; OS Astyanax mexicanus (Blind cave fish) (Astyanax fasciatus mexicanus). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; OC Characoidei; Characidae; Characidae incertae sedis; Astyanax clade; OC Astyanax. OX NCBI_TaxID=7994 {ECO:0000313|Ensembl:ENSAMXP00000009302, ECO:0000313|Proteomes:UP000018467}; RN [1] {ECO:0000313|Ensembl:ENSAMXP00000009302, ECO:0000313|Proteomes:UP000018467} RP NUCLEOTIDE SEQUENCE. RA Jeffery W., Warren W., Wilson R.K.; RL Submitted (MAR-2013) to the EMBL/GenBank/DDBJ databases. RN [2] {ECO:0000313|Ensembl:ENSAMXP00000009302} RP IDENTIFICATION. RG Ensembl; RL Submitted (FEB-2014) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an Ensembl CC automatic analysis pipeline and should be considered as CC preliminary data. {ECO:0000313|Ensembl:ENSAMXP00000009302}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; APWO01079193; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR RefSeq; XP_007246026.1; XM_007245964.2. DR Ensembl; ENSAMXT00000009302; ENSAMXP00000009302; ENSAMXG00000009052. DR GeneID; 103044920; -. DR CTD; 2068; -. DR GeneTree; ENSGT00550000075092; -. DR OMA; DEVWKYK; -. DR Proteomes; UP000018467; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000018467}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000018467}. FT DOMAIN 7 285 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 760 AA; 87077 MW; 5A4A2E2F636679A7 CRC64; MKLNIEGLLV YFPYDYIYPE QYSYMLELKR TLDAKGHGVL EMPSGTGKTI SLLSLIVAYQ KAYPLEVTKL IYCSRTVPEI EKVVEELRKL MEFYTKETGE KNNFLALALS SRKNLCIHPE VSSLRFGKEV DGKCHSLTAS YIRAQHHSNP SQPVCRFYEE FDAVGRQVPI PSGIYNLDDL KDFGRKKGWC PYYLARYSIL HANIVVYSYH YLLDPKIADL VSKELAKKSV VVFDEAHNID NVCIDSMSVN ITRRTLDRCQ TNVDTLQNTI QRIKETDAAK LREEYRRLVE GLKEANVARE TDIYLSNPVL PDEVLQEAIP GSIRTAEHFV GFLKRFLEYL KARLRIHHVV QESSPQFLKD IYEKVCIDRK PLRFCAERLR SLLRTLEIAD IADFSPITLI SHFATLVSTY SKGFTIIIEP FEDKTPTIAN PVLHFSCMDP SIAIKPVFER FQSVVITSGT LSPLDIYPRI LDFRPVTMAS FTMTLARTCL CPLIVGRGND QVAMSSKFET REDFAVIRNY GNLLLEMSAI VPDGIVAFFT SYVYMENIVA SWYEQGILEN IQRNKLIFIE TPDAAETSMA LEKYQEACEN GRGAILLSVA RGKVSEGIDF VHHFGRAVIM FGVPYVYTQS RILKARLEYL RDQFQIREND FLTFDAMRHA AQCVGRAIRG KTDYGLMIFA DKRYARADKR GKLPRWIQEH ISDGSLNLTI DETVQLSKHF LRQMAQPFRR EDQLGLSLLT LEQLQSEEML EKISQIAQQA // ID W5NAQ1_LEPOC Unreviewed; 760 AA. AC W5NAQ1; DT 16-APR-2014, integrated into UniProtKB/TrEMBL. DT 16-APR-2014, sequence version 1. DT 11-MAY-2016, entry version 20. DE SubName: Full=Uncharacterized protein {ECO:0000313|Ensembl:ENSLOCP00000017710}; GN Name=ERCC2 (1 to many) {ECO:0000313|Ensembl:ENSLOCP00000017710}; OS Lepisosteus oculatus (Spotted gar). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; OC Lepisosteus. OX NCBI_TaxID=7918 {ECO:0000313|Ensembl:ENSLOCP00000017710, ECO:0000313|Proteomes:UP000018468}; RN [1] {ECO:0000313|Ensembl:ENSLOCP00000017710, ECO:0000313|Proteomes:UP000018468} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RA Di Palma F., Alfoldi J., Johnson J., Berlin A., Gnerre S., Jaffe D., RA MacCallum I., Young S., Walker B.J., Lander E.S., Lindblad-Toh K.; RT "The Draft Genome of Lepisosteus oculatus."; RL Submitted (DEC-2011) to the EMBL/GenBank/DDBJ databases. RN [2] {ECO:0000313|Ensembl:ENSLOCP00000017710} RP IDENTIFICATION. RG Ensembl; RL Submitted (FEB-2014) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an Ensembl CC automatic analysis pipeline and should be considered as CC preliminary data. {ECO:0000313|Ensembl:ENSLOCP00000017710}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AHAT01029351; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AHAT01029352; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR Ensembl; ENSLOCT00000017742; ENSLOCP00000017710; ENSLOCG00000014383. DR GeneTree; ENSGT00550000075092; -. DR OMA; LVVCNYH; -. DR Proteomes; UP000018468; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 3. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000018468}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000018468}. FT DOMAIN 7 283 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 760 AA; 86281 MW; 4121ED337F92E77C CRC64; CRLNIDGLLV YFPYDYIYPE QYSYMLELKR TLDAKVSSPS VPAARMQASH PGLSRLSAVF GRVRLLQLLR VGLEEAVRVL GDRRSVIPAS INLAHSSGIX SENDVKAGLA LSGRSSLLVH GEIRIEEAKS ASCQSSEYCC ILLSDNNCDS APFTPYFHKE FDALGRQVPI PAGIYNLDDL KAFGRRKGWC PYYLARYSIL HANIVVYSYH YLLDPKIADL VSKELAKKSV VVFDEAHNID NVCIDSMSVN INRRILDRSQ ANVETLQSTI HKIKETDAAK LKEEYRRLVE GLKEANVARE TDVYLANPVL PDEILQEAIP GSIRTAEHFV GFLKRFLEYL KSRLRIQHMV QESPPQFLKD IFDKVCIDRK PLRFCAERLR SLLRTLEIAD IADFSAITLI SHFATLVSTY SKGFTIIIEP FEDRTPTIAN PVLHFSCMDS SIAIKPVFER FQSVVITSGT LSPLDIYPRI LDFRPVTMAS FTMTLARTCL CPLIVGRGND QVAISSKFET REDFAVIRNY GNLLLEMSAI VPDGIVAFFT SYQYMENIVA SWYEQGILEN VQRNKLIFIE TQDAAETSMA LEKYQEACEN GRGAILLSVA RGKVSEGIDF VHHYGRAVIM FGVPYVYTQS RILKARLEYL RDQFQIREND FLTFDAMRHA AQCVGRAIRG KTDYGLMIFA DKRYARADKR GKLPRWIQEH ILDSSLNLTI DETVQLSKHF LRDMAQPFRK EDQLGLSLLT LDQLQSEEML KKIAQIAHQV // ID W5PJF6_SHEEP Unreviewed; 763 AA. AC W5PJF6; DT 16-APR-2014, integrated into UniProtKB/TrEMBL. DT 16-APR-2014, sequence version 1. DT 11-MAY-2016, entry version 19. DE SubName: Full=Uncharacterized protein {ECO:0000313|Ensembl:ENSOARP00000010577}; DE Flags: Fragment; GN Name=ERCC2 {ECO:0000313|Ensembl:ENSOARP00000010577}; OS Ovis aries (Sheep). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; OC Pecora; Bovidae; Caprinae; Ovis. OX NCBI_TaxID=9940 {ECO:0000313|Ensembl:ENSOARP00000010577, ECO:0000313|Proteomes:UP000002356}; RN [1] {ECO:0000313|Ensembl:ENSOARP00000010577, ECO:0000313|Proteomes:UP000002356} RP NUCLEOTIDE SEQUENCE. RX PubMed=20809919; DOI=10.1111/j.1365-2052.2010.02100.x; RA Archibald A.L., Cockett N.E., Dalrymple B.P., Faraut T., Kijas J.W., RA Maddox J.F., McEwan J.C., Hutton Oddy V., Raadsma H.W., Wade C., RA Wang J., Wang W., Xun X.; RT "The sheep genome reference sequence: a work in progress."; RL Anim. Genet. 41:449-453(2010). RN [2] {ECO:0000313|Ensembl:ENSOARP00000010577} RP IDENTIFICATION. RG Ensembl; RL Submitted (FEB-2014) to UniProtKB. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC -!- CAUTION: The sequence shown here is derived from an Ensembl CC automatic analysis pipeline and should be considered as CC preliminary data. {ECO:0000313|Ensembl:ENSOARP00000010577}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AMGL01029142; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AMGL01029143; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AMGL01029144; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR Ensembl; ENSOART00000010734; ENSOARP00000010577; ENSOARG00000009857. DR GeneTree; ENSGT00550000075092; -. DR OMA; DEVWKYK; -. DR Proteomes; UP000002356; Chromosome 14. DR GO; GO:0019907; C:cyclin-dependent protein kinase activating kinase holoenzyme complex; IEA:Ensembl. DR GO; GO:0005737; C:cytoplasm; IEA:Ensembl. DR GO; GO:0005675; C:holo TFIIH complex; IEA:Ensembl. DR GO; GO:0071817; C:MMXD complex; IEA:Ensembl. DR GO; GO:0043139; F:5'-3' DNA helicase activity; IEA:Ensembl. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0008353; F:RNA polymerase II carboxy-terminal domain kinase activity; IEA:Ensembl. DR GO; GO:0007568; P:aging; IEA:Ensembl. DR GO; GO:0006915; P:apoptotic process; IEA:Ensembl. DR GO; GO:0030282; P:bone mineralization; IEA:Ensembl. DR GO; GO:0008283; P:cell proliferation; IEA:Ensembl. DR GO; GO:0032289; P:central nervous system myelin formation; IEA:Ensembl. DR GO; GO:0007059; P:chromosome segregation; IEA:Ensembl. DR GO; GO:0040016; P:embryonic cleavage; IEA:Ensembl. DR GO; GO:0043249; P:erythrocyte maturation; IEA:Ensembl. DR GO; GO:0030198; P:extracellular matrix organization; IEA:Ensembl. DR GO; GO:0035315; P:hair cell differentiation; IEA:Ensembl. DR GO; GO:0048820; P:hair follicle maturation; IEA:Ensembl. DR GO; GO:0060218; P:hematopoietic stem cell differentiation; IEA:Ensembl. DR GO; GO:0001701; P:in utero embryonic development; IEA:Ensembl. DR GO; GO:0035264; P:multicellular organism growth; IEA:Ensembl. DR GO; GO:0033683; P:nucleotide-excision repair, DNA incision; IEA:Ensembl. DR GO; GO:0043388; P:positive regulation of DNA binding; IEA:Ensembl. DR GO; GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IEA:Ensembl. DR GO; GO:0009791; P:post-embryonic development; IEA:Ensembl. DR GO; GO:1901990; P:regulation of mitotic cell cycle phase transition; IEA:Ensembl. DR GO; GO:0006979; P:response to oxidative stress; IEA:Ensembl. DR GO; GO:0021510; P:spinal cord development; IEA:Ensembl. DR GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:Ensembl. DR GO; GO:0006283; P:transcription-coupled nucleotide-excision repair; IEA:Ensembl. DR GO; GO:0009650; P:UV protection; IEA:Ensembl. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000002356}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000002356}. FT DOMAIN 15 291 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT NON_TER 1 1 {ECO:0000313|Ensembl:ENSOARP00000010577}. SQ SEQUENCE 763 AA; 86465 MW; 867753541D3656D9 CRC64; GGTPAAPAAR LNVDGLLVYF PYDYIYPEQF SYMLELKRTL DAKGHGVLEM PSGTGKTVSL LALIMAYQRA YPLEVTKLIY CSRTVPEIEK VIEELRKLLS FYEKQEGEKL PFLGLALSSR KNLCIHPEVT PLRFGKDVDG KCHSLTASYV RAQYQRDSSL PHCRFYEEFD VHGRQVPLPT GIYNLDDLKA VGRRQGWCPY FLARYSILHA NVVVYSYHYL LDPKIADLVS KELARKAVVV FDEAHNIDNV CIDSMSVNLT RRTLDRCQAN LETLQKTVLS DKETDEQRLR EEYRRLVEGL REASAARETD AHLANPVLPD EVLKGEPCPR LPRPGDTTRS SRLVLPMRTL CPVEGKPPGT VCGCDQKPCR APHPTRFCAE RLRSLLHTLE ISDLTDFSPL TLLANFATLV STYAKGFTII IEPFDDRTPT IANPILHFSC MDASLAIKPV FERFQSVIIT SGTLSPLDIY PKILDFHPVT MATFTMTLAR VCLCPMIIGR GNDQVAISSK FETREDIAVI RNYGNLLLEM SAVVPDGIVA FFTSYQYMES TVASWYEQGI LENIQRNKLL FIETQDGAET SVALEKYQEA CENGRGAILL SVARGKVSEG IDFVHHYGRA VIMFGVPYVY TQSRILKARL EYLRDQFQIR ENDFLTFDAM RHAAQCVGRA IRGKTDYGLM VFADKRFARA DKRGKLPRWI QEHLTDANLN LTVDEGVQVA KYFLRQMAQP FHREDQLGLS LLSLEQLESE ETLRRIEQIA QQL // ID W6SES4_9CLOT Unreviewed; 779 AA. AC W6SES4; DT 16-APR-2014, integrated into UniProtKB/TrEMBL. DT 16-APR-2014, sequence version 1. DT 11-MAY-2016, entry version 16. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CDM68185.1}; GN ORFNames=CM240_1021 {ECO:0000313|EMBL:CDM68185.1}; OS Clostridium bornimense. OC Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; OC Clostridium. OX NCBI_TaxID=1216932 {ECO:0000313|EMBL:CDM68185.1, ECO:0000313|Proteomes:UP000019426}; RN [1] {ECO:0000313|EMBL:CDM68185.1, ECO:0000313|Proteomes:UP000019426} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=M2/40 {ECO:0000313|Proteomes:UP000019426}; RA Wibberg D., Puehler A., Schlueter A.; RT "Complete genome sequence of Clostridum sp. M2/40."; RL Submitted (NOV-2013) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; HG917868; CDM68185.1; -; Genomic_DNA. DR RefSeq; WP_044037077.1; NZ_HG917868.1. DR EnsemblBacteria; CDM68185; CDM68185; CM240_1021. DR KEGG; clt:CM240_1021; -. DR Proteomes; UP000019426; Chromosome. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 4. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW Complete proteome {ECO:0000313|Proteomes:UP000019426}; KW Reference proteome {ECO:0000313|Proteomes:UP000019426}. FT DOMAIN 181 427 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 779 AA; 91757 MW; E463B120675980FE CRC64; MKSEIKISIR NLVEFVMRRG SIDNRYVSSI KALEGIRGHQ KVQGSYGDNY MAEVSLSHIF TYEDVDIKVE GRVDGILIED EKVTIDEIKT TTRDLLIIDE DFNPLHWAQG KCYGYIYCIE NKIDNIYVQI TYYNVDTGYT RILKNQYSVD ELERFFFSLL DEYKYWYDEK INWQDKRNKS ISNLQFPFKE YRKGQRELAV RVYKSIINSK KCFARAPTGI GKTVSTLFPT IKAMGEGHTS KIFYLTAKTI TREVAEDTIN FMRKRGLMIS SVTLTAKEKV CKMDEMNCNP EYCSYANGYF DRLNGALKKI IKEYNNFDRK IIDEISEKYK LCPFELSLEL TSIADIIVGD YNYVFDPRVY LKRFFEEKEN DYTLLIDEGH NLVDRARSMY SSQLYEEQFI EVKKSLKKGT RLFNSIKEII DYLKDKGSVL KVIDENYIIE NEELKEFHKL LEEFIILCDY YLSKSSEVNK ELLQLYFDIH NFIVISQYYD EHYVTLSKYD FKGINIILYC VDPSKVIQER MKKCKSSIIF SATLMPINYF KDIYGYKEGD YSINLQSPFN IDNRIIMIGD NVDTTYKKRR ETSSQIVDYI MNFTTSKEGN YIVFFPSYEY MKIIYEKVIS EHKEINIFMQ KSDMTEEEKE KFLDLFNEEN KKTYIGFCVL GGHFSEGIDL VGDKLIGVII VGVGMPQICI EREIIKNYFD KESKGFYYSY IYPGIIKVLQ AAGRCIRTEE DRGAILLLDT RYSKNQYRSL LPEEWLSCIK VRGGNEVKKC CKEFWNKWC // ID W7K6J6_PLAFO Unreviewed; 669 AA. AC W7K6J6; DT 16-APR-2014, integrated into UniProtKB/TrEMBL. DT 16-APR-2014, sequence version 1. DT 11-MAY-2016, entry version 16. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EWC88620.1}; GN ORFNames=PFNF54_02651 {ECO:0000313|EMBL:EWC88620.1}; OS Plasmodium falciparum (isolate NF54). OC Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; OC Plasmodiidae; Plasmodium; Plasmodium (Laverania). OX NCBI_TaxID=5843 {ECO:0000313|EMBL:EWC88620.1, ECO:0000313|Proteomes:UP000030673}; RN [1] {ECO:0000313|EMBL:EWC88620.1, ECO:0000313|Proteomes:UP000030673} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=NF54 {ECO:0000313|EMBL:EWC88620.1, RC ECO:0000313|Proteomes:UP000030673}; RG The Broad Institute Genome Sequencing Platform; RG The Broad Institute Genome Sequencing Center for Infectious Disease; RA Neafsey D., Cheeseman I., Volkman S., Adams J., Walker B., Young S.K., RA Zeng Q., Gargeya S., Fitzgerald M., Haas B., Abouelleil A., RA Alvarado L., Arachchi H.M., Berlin A.M., Chapman S.B., Dewar J., RA Goldberg J., Griggs A., Gujja S., Hansen M., Howarth C., Imamovic A., RA Larimer J., McCowan C., Murphy C., Neiman D., Pearson M., Priest M., RA Roberts A., Saif S., Shea T., Sisk P., Sykes S., Wortman J., RA Nusbaum C., Birren B.; RT "The Genome Sequence of Plasmodium falciparum NF54."; RL Submitted (FEB-2013) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; KE123807; EWC88620.1; -; Genomic_DNA. DR EnsemblProtists; EWC88620; EWC88620; PFNF54_02651. DR Proteomes; UP000030673; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 1. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR006935; Helicase/UvrB_N. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR Pfam; PF04851; ResIII; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000030673}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000030673}. FT DOMAIN 8 397 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 96 123 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 669 AA; 77602 MW; FC93451087DC9D2C CRC64; MVVFNLDDVE IFFPYDYIYP EQYAYMKYLK KTLDSEGHCV LEMPTGTGKT VAIFSLITSY QYHKKDEGKF IFCTRTVAEM EKSLIELKKV IQYRINVMKQ RKVEKLKNEK DDVNDVIKND DDMNLMFSDF FLDESFGDNE KKKKNHDNNN DINNDDIKIN DDIKNNDDIN NDDRNNNDDI NNNNNDRNNN NGRNNNNDRN NNNEDEDHLN DLCYSPLLME DIIKNVVIPG NIRKSEHFLN LMRIVVVYLK KYINIYDITS EGPLSFLYKF EKDTKLDTSF FKYCFDRLKS LLNNLQIVNI EDYSSLNIVC NFCTLLGNYF KGFIIICEPY PEATGIYDPL IQFACLDSSI AMKTVINKYK SIILTSGTIT PLELYPKLLN FKTVLTASFP MSFDRNCVCP LIVTKGSDLI PLSSQFSLRN DLSVIKNYGI LLVDMCKCIP DGIVAYFPSY IYMEQVISSW YELGVIANIL EYKLIFIETK DIVSTTIALH NFKKACDLGK GAVFLSICRG KIAEGIDFDK HYGKCVILFG IPYQYTLSKI LKSRLDFLKE TYNIQENEFL TFDAMRQASQ CVGRIIRNKK DYGIMIFSDI RYAKHDKKNK LPPWIIKCMD ISNINLTVTT AVDISKQFLL NMSQEYRETG QTKISPLMLK NQVKCWTMVK SILNMDDFI // ID W7KFS2_PLAFO Unreviewed; 912 AA. AC W7KFS2; DT 16-APR-2014, integrated into UniProtKB/TrEMBL. DT 16-APR-2014, sequence version 1. DT 11-MAY-2016, entry version 19. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EWC88622.1}; GN ORFNames=PFNF54_02653 {ECO:0000313|EMBL:EWC88622.1}; OS Plasmodium falciparum (isolate NF54). OC Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; OC Plasmodiidae; Plasmodium; Plasmodium (Laverania). OX NCBI_TaxID=5843 {ECO:0000313|EMBL:EWC88622.1, ECO:0000313|Proteomes:UP000030673}; RN [1] {ECO:0000313|EMBL:EWC88622.1, ECO:0000313|Proteomes:UP000030673} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=NF54 {ECO:0000313|EMBL:EWC88622.1, RC ECO:0000313|Proteomes:UP000030673}; RG The Broad Institute Genome Sequencing Platform; RG The Broad Institute Genome Sequencing Center for Infectious Disease; RA Neafsey D., Cheeseman I., Volkman S., Adams J., Walker B., Young S.K., RA Zeng Q., Gargeya S., Fitzgerald M., Haas B., Abouelleil A., RA Alvarado L., Arachchi H.M., Berlin A.M., Chapman S.B., Dewar J., RA Goldberg J., Griggs A., Gujja S., Hansen M., Howarth C., Imamovic A., RA Larimer J., McCowan C., Murphy C., Neiman D., Pearson M., Priest M., RA Roberts A., Saif S., Shea T., Sisk P., Sykes S., Wortman J., RA Nusbaum C., Birren B.; RT "The Genome Sequence of Plasmodium falciparum NF54."; RL Submitted (FEB-2013) to the EMBL/GenBank/DDBJ databases. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; KE123807; EWC88622.1; -; Genomic_DNA. DR EnsemblProtists; EWC88622; EWC88622; PFNF54_02653. DR Proteomes; UP000030673; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214}; KW Complete proteome {ECO:0000313|Proteomes:UP000030673}; KW Helicase {ECO:0000256|SAAS:SAAS00566214}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214}; KW Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000030673}. FT DOMAIN 1 272 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 912 AA; 106041 MW; 82D9C62577682006 CRC64; MFSNGSKENV KEYNKHDDHI NNLKEFGENS EILAIGISAR RCMCINDKVL LKHEREKIDE ECRKLTATFI REKKYINNKI DNEIYHPNVD KISDFILRNR HHLDIEDYFD IYNSRNSLEE YDNIGLCGYY ENYKKEFLYD LIKPGVYTIE DLKVLCKNYK NKENVNVPIC PYFCAKKIIE ISKVIILNYQ YVIDPKVSKA LFSWKDMNKN VHLKNKNDII VFDEAHNIDS VCLEALSVNI DRNILNKASM NITKLMKKIE QSKMLNEQKL KEECNKILEK IKLQKCNQSL NVTNNVINID NMKCINHMDN INKTRSDGNV GSYLEKETNK HHNIEGKPGE LFVTNEQEKK KRKVESSPVA YFDEDMNLMF SDFFLDESFG DNEKKKKNHD NNNDINNDDI KINDDIKNND DINNDDRNNN DDINNNNNDR NNNNGRNNNN DRNNNNEDED HLNDLCYSPL LMEDIIKNVV IPGNIRKSEH FLNLMRIVVV YLKKYINIYD ITSEGPLSFL YKFEKDTKLD TSFFKYCFDR LKSLLNNLQI VNIEDYSSLN IVCNFCTLLG NYFKGFIIIC EPYPEATGIY DPLIQFACLD SSIAMKTVIN KYKSIILTSG TITPLELYPK LLNFKTVLTA SFPMSFDRNC VCPLIVTKGS DLIPLSSQFS LRNDLSVIKN YGILLVDMCK CIPDGIVAYF PSYIYMEQVI SSWYELGVIA NILEYKLIFI ETKDIVSTTI ALHNFKKACD LGKGAVFLSI CRGKIAEGID FDKHYGKCVI LFGIPYQYTL SKILKSRLDF LKETYNIQEN EFLTFDAMRQ ASQCVGRIIR NKKDYGIMIF SDIRYAKHDK KNKLPPWIIK CMDISNINLT VTTAVDISKQ FLLNMSQEYR ETGQTKISPL MLKNQVKCWT MVKSILNMDD FI // ID W7MNR9_GIBM7 Unreviewed; 789 AA. AC W7MNR9; DT 16-APR-2014, integrated into UniProtKB/TrEMBL. DT 16-APR-2014, sequence version 1. DT 11-MAY-2016, entry version 18. DE SubName: Full=DNA repair helicase rad15 {ECO:0000313|EMBL:EWG52716.1}; GN ORFNames=FVEG_11369 {ECO:0000313|EMBL:EWG52716.1}; OS Gibberella moniliformis (strain M3125 / FGSC 7600) (Maize ear and OS stalk rot fungus) (Fusarium verticillioides). OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; OC Sordariomycetes; Hypocreomycetidae; Hypocreales; Nectriaceae; OC Fusarium; Fusarium fujikuroi species complex. OX NCBI_TaxID=334819 {ECO:0000313|EMBL:EWG52716.1, ECO:0000313|Proteomes:UP000009096}; RN [1] {ECO:0000313|EMBL:EWG52716.1, ECO:0000313|Proteomes:UP000009096} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=M3125 / FGSC 7600 {ECO:0000313|Proteomes:UP000009096}; RX PubMed=20237561; DOI=10.1038/nature08850; RA Ma L.-J., van der Does H.C., Borkovich K.A., Coleman J.J., RA Daboussi M.-J., Di Pietro A., Dufresne M., Freitag M., Grabherr M., RA Henrissat B., Houterman P.M., Kang S., Shim W.-B., Woloshuk C., RA Xie X., Xu J.-R., Antoniw J., Baker S.E., Bluhm B.H., Breakspear A., RA Brown D.W., Butchko R.A.E., Chapman S., Coulson R., Coutinho P.M., RA Danchin E.G.J., Diener A., Gale L.R., Gardiner D.M., Goff S., RA Hammond-Kosack K.E., Hilburn K., Hua-Van A., Jonkers W., Kazan K., RA Kodira C.D., Koehrsen M., Kumar L., Lee Y.-H., Li L., Manners J.M., RA Miranda-Saavedra D., Mukherjee M., Park G., Park J., Park S.-Y., RA Proctor R.H., Regev A., Ruiz-Roldan M.C., Sain D., Sakthikumar S., RA Sykes S., Schwartz D.C., Turgeon B.G., Wapinski I., Yoder O., RA Young S., Zeng Q., Zhou S., Galagan J., Cuomo C.A., Kistler H.C., RA Rep M.; RT "Comparative genomics reveals mobile pathogenicity chromosomes in RT Fusarium."; RL Nature 464:367-373(2010). CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC {ECO:0000256|SAAS:SAAS00566177}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00553264}. CC -!- SIMILARITY: Contains helicase ATP-binding domain. CC {ECO:0000256|SAAS:SAAS00566183}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; DS022257; EWG52716.1; -; Genomic_DNA. DR Proteomes; UP000009096; Chromosome 9. DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR013020; DNA_helicase_DNA-repair_Rad3. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR001945; RAD3/XPD. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00604; rad3; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EWG52716.1}; Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000009096}; KW Helicase {ECO:0000256|SAAS:SAAS00566214, ECO:0000313|EMBL:EWG52716.1}; KW Hydrolase {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EWG52716.1}; KW Nucleotide-binding {ECO:0000256|SAAS:SAAS00566214, KW ECO:0000313|EMBL:EWG52716.1}; Nucleus {ECO:0000256|SAAS:SAAS00439093}; KW Reference proteome {ECO:0000313|Proteomes:UP000009096}. FT DOMAIN 7 282 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. FT COILED 255 297 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 789 AA; 91008 MW; A381580FE74A30BC CRC64; MKFNIDDLPV LFPYPRIYPE QYAYMCDLKK TLDAGGHCVL EMPSGTGKTV SLLSLIVAYQ QYMPEKRKLI YCSRTMSEIE KALVELKSLM KYRAEQLGYE EEFRGLGLTS RKNLCLHPSV KREKSGAIVD ARCRSLTAGF VKEKKERGES VDVCVYHDNL DLLEPHNLIP NGVWSFDDMI RYGEEHKQCP YFTARRMMQY CNVVIFSYHY LLDPKIAERV SKDFSKDCIV VFDEAHNIDN VCIESLSTDI TEDSLRKATR GAQNLENKIS QMRDTDQQQL QNEYEKLVQG LRDADEARQE DAFMANPALP EDLLKEAVPG NIRRAEHFIA FLKRFIEYLK TRMKVRQVIS ETPPSFLAHL REHTFIEKKP LRFCAERLTS LVRTLELTNI EDYQPLQEVA TFATLVATYE KGFLLILEPF ESDTAEVPNP VLHFTCLDAA IAIKPVFDRF YSVIITSGTI SPLEIYPKML DFSTVIQESY AMTLARRSFM PMIVTRGSDQ ASVSTSFQVR NEPSVVRNYG NLLTEFAKIT PDGMVVFFPS YLYMESIISM WQGMGILDEV WKYKLILVET PDAQETSLAL ETYRTACCNG RGAVLLCVAR GKVSEGIDFD HQYGRTVLCI GVPFQYTESR ILKARLQFLR ETYRIKENDF LSFDAMRHAA QCLGRVLRGK DDYGIMVLAD RRFQKKRSQL PKWINQGLQE SDVNLSTDMA VSSARRFLRT MAQPFRAKDQ EGISTWGYKD LMEHKEKMDL ERIKELEEEA QQPKPAAQDN NFEYDEDEFD QDMMEMDGF // ID X6MSX8_RETFI Unreviewed; 278 AA. AC X6MSX8; DT 11-JUN-2014, integrated into UniProtKB/TrEMBL. DT 11-JUN-2014, sequence version 1. DT 16-MAR-2016, entry version 9. DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ETO16215.1}; GN ORFNames=RFI_21141 {ECO:0000313|EMBL:ETO16215.1}; OS Reticulomyxa filosa. OC Eukaryota; Rhizaria; Foraminifera; Monothalamids; Reticulomyxidae; OC Reticulomyxa. OX NCBI_TaxID=46433 {ECO:0000313|EMBL:ETO16215.1, ECO:0000313|Proteomes:UP000023152}; RN [1] {ECO:0000313|EMBL:ETO16215.1, ECO:0000313|Proteomes:UP000023152} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RX PubMed=24332546; RA Glockner G., Hulsmann N., Schleicher M., Noegel A.A., Eichinger L., RA Gallinger C., Pawlowski J., Sierra R., Euteneuer U., Pillet L., RA Moustafa A., Platzer M., Groth M., Szafranski K., Schliwa M.; RT "The Genome of the Foraminiferan Reticulomyxa filosa."; RL Curr. Biol. 0:0-0(2013). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. {ECO:0000313|EMBL:ETO16215.1}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ASPP01018473; ETO16215.1; -; Genomic_DNA. DR EnsemblProtists; ETO16215; ETO16215; RFI_21141. DR Proteomes; UP000023152; Unassembled WGS sequence. DR GO; GO:0005634; C:nucleus; IEA:InterPro. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. PE 4: Predicted; KW Complete proteome {ECO:0000313|Proteomes:UP000023152}; KW Reference proteome {ECO:0000313|Proteomes:UP000023152}. FT DOMAIN 1 74 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51193}. SQ SEQUENCE 278 AA; 31385 MW; 244E7EA9D6B75B87 CRC64; MLDPKISNLV SRDLAKDCIV VFDEAHNIDN ICIEALSVRL DRRRLHTAMQ NLSTLNNMVL NMEQNDVDRL NDEYKALVQG LINSNTSAST NTNVNANASQ SRPSLGIDMS AFTDTLLANP VLSDDILQQA IPGNIRKSKH FLNFLKTLIE YLKQKMSVEK VIQEETLTFI SDFQKTTGMH ENQLLALRFC HDRLHSLFRT LMLTDLDVYT PLVKVTTLAS LVGTYSQGFK ILIEPYDTRT PTIKDPILQL CCLDASIAMQ PVLKKFRNVI ITSGCVYF // ID XPD_THEAC Reviewed; 602 AA. AC Q9HM14; DT 14-OCT-2008, integrated into UniProtKB/Swiss-Prot. DT 01-MAR-2001, sequence version 1. DT 11-MAY-2016, entry version 82. DE RecName: Full=ATP-dependent DNA helicase Ta0057; DE EC=3.6.4.12; GN OrderedLocusNames=Ta0057; OS Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / OS NBRC 15155 / AMRC-C165). OC Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; OC Thermoplasmataceae; Thermoplasma. OX NCBI_TaxID=273075; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165; RX PubMed=11029001; DOI=10.1038/35035069; RA Ruepp A., Graml W., Santos-Martinez M.-L., Koretke K.K., Volker C., RA Mewes H.-W., Frishman D., Stocker S., Lupas A.N., Baumeister W.; RT "The genome sequence of the thermoacidophilic scavenger Thermoplasma RT acidophilum."; RL Nature 407:508-513(2000). RN [2] RP X-RAY CRYSTALLOGRAPHY (2.9 ANGSTROMS), AND IRON-SULFUR CLUSTER. RX PubMed=18578568; DOI=10.1371/journal.pbio.0060149; RA Wolski S.C., Kuper J., Hanzelmann P., Truglio J.J., Croteau D.L., RA Van Houten B., Kisker C.; RT "Crystal structure of the FeS cluster-containing nucleotide excision RT repair helicase XPD."; RL PLoS Biol. 6:E149-E149(2008). CC -!- FUNCTION: ATP-dependent 5'-3' DNA helicase involved in nucleotide CC excision repair (NER) of DNA. {ECO:0000250}. CC -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate. CC -!- COFACTOR: CC Name=[4Fe-4S] cluster; Xref=ChEBI:CHEBI:49883; CC Note=Binds 1 [4Fe-4S] cluster.; CC -!- SIMILARITY: Belongs to the helicase family. RAD3/XPD subfamily. CC {ECO:0000305}. CC -!- SIMILARITY: Contains 1 helicase ATP-binding domain. CC {ECO:0000255|PROSITE-ProRule:PRU00541}. CC -!- SIMILARITY: Contains 1 helicase C-terminal domain. CC {ECO:0000255|PROSITE-ProRule:PRU00542}. CC -!- SEQUENCE CAUTION: CC Sequence=CAC11205.1; Type=Erroneous initiation; Evidence={ECO:0000305}; CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AL445063; CAC11205.1; ALT_INIT; Genomic_DNA. DR PDB; 2VSF; X-ray; 2.90 A; A=1-602. DR PDB; 4A15; X-ray; 2.20 A; A=2-602. DR PDB; 5H8W; X-ray; 2.20 A; A=1-597. DR PDBsum; 2VSF; -. DR PDBsum; 4A15; -. DR PDBsum; 5H8W; -. DR STRING; 273075.Ta0057m; -. DR EnsemblBacteria; CAC11205; CAC11205; CAC11205. DR eggNOG; arCOG00770; Archaea. DR eggNOG; COG1199; LUCA. DR OMA; RENYLTI; -. DR EvolutionaryTrace; Q9HM14; -. DR Proteomes; UP000001024; Chromosome. DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW. DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. DR GO; GO:0006281; P:DNA repair; IEA:UniProtKB-KW. DR GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:UniProtKB-KW. DR GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-KW. DR Gene3D; 3.40.50.300; -; 4. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR010614; DEAD_2. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR001650; Helicase_C. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; SSF52540; 4. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. DR PROSITE; PS51194; HELICASE_CTER; 1. PE 1: Evidence at protein level; KW 3D-structure; 4Fe-4S; ATP-binding; Complete proteome; DNA damage; KW DNA repair; DNA-binding; Helicase; Hydrolase; Iron; Iron-sulfur; KW Metal-binding; Nucleotide-binding; Reference proteome; Transcription; KW Transcription regulation. FT CHAIN 1 602 ATP-dependent DNA helicase Ta0057. FT /FTId=PRO_0000352310. FT DOMAIN 1 247 Helicase ATP-binding. FT {ECO:0000255|PROSITE-ProRule:PRU00541}. FT DOMAIN 421 602 Helicase C-terminal. FT {ECO:0000255|PROSITE-ProRule:PRU00542}. FT NP_BIND 11 18 ATP. {ECO:0000255|PROSITE- FT ProRule:PRU00541}. FT MOTIF 193 196 DEAH box. FT METAL 74 74 Iron-sulfur (4Fe-4S). FT METAL 95 95 Iron-sulfur (4Fe-4S). FT METAL 110 110 Iron-sulfur (4Fe-4S). FT METAL 146 146 Iron-sulfur (4Fe-4S). FT STRAND 4 10 {ECO:0000244|PDB:4A15}. FT STRAND 13 16 {ECO:0000244|PDB:2VSF}. FT HELIX 17 32 {ECO:0000244|PDB:4A15}. FT STRAND 35 42 {ECO:0000244|PDB:4A15}. FT HELIX 43 59 {ECO:0000244|PDB:4A15}. FT STRAND 64 66 {ECO:0000244|PDB:4A15}. FT HELIX 70 73 {ECO:0000244|PDB:4A15}. FT HELIX 77 80 {ECO:0000244|PDB:4A15}. FT HELIX 88 103 {ECO:0000244|PDB:4A15}. FT HELIX 107 109 {ECO:0000244|PDB:2VSF}. FT HELIX 115 118 {ECO:0000244|PDB:4A15}. FT HELIX 120 129 {ECO:0000244|PDB:4A15}. FT HELIX 133 142 {ECO:0000244|PDB:4A15}. FT HELIX 147 154 {ECO:0000244|PDB:4A15}. FT HELIX 155 157 {ECO:0000244|PDB:4A15}. FT STRAND 159 164 {ECO:0000244|PDB:4A15}. FT HELIX 165 168 {ECO:0000244|PDB:4A15}. FT HELIX 171 181 {ECO:0000244|PDB:4A15}. FT HELIX 185 187 {ECO:0000244|PDB:4A15}. FT STRAND 188 192 {ECO:0000244|PDB:4A15}. FT HELIX 195 197 {ECO:0000244|PDB:4A15}. FT HELIX 198 206 {ECO:0000244|PDB:4A15}. FT STRAND 208 211 {ECO:0000244|PDB:4A15}. FT HELIX 212 224 {ECO:0000244|PDB:4A15}. FT STRAND 229 231 {ECO:0000244|PDB:4A15}. FT HELIX 236 254 {ECO:0000244|PDB:4A15}. FT STRAND 256 258 {ECO:0000244|PDB:4A15}. FT STRAND 260 262 {ECO:0000244|PDB:4A15}. FT HELIX 265 275 {ECO:0000244|PDB:4A15}. FT HELIX 279 302 {ECO:0000244|PDB:4A15}. FT HELIX 310 322 {ECO:0000244|PDB:4A15}. FT TURN 326 328 {ECO:0000244|PDB:4A15}. FT STRAND 329 334 {ECO:0000244|PDB:4A15}. FT HELIX 336 338 {ECO:0000244|PDB:4A15}. FT STRAND 340 345 {ECO:0000244|PDB:4A15}. FT HELIX 349 352 {ECO:0000244|PDB:4A15}. FT HELIX 353 357 {ECO:0000244|PDB:4A15}. FT STRAND 358 366 {ECO:0000244|PDB:4A15}. FT HELIX 370 377 {ECO:0000244|PDB:4A15}. FT STRAND 383 385 {ECO:0000244|PDB:4A15}. FT HELIX 392 394 {ECO:0000244|PDB:4A15}. FT STRAND 395 400 {ECO:0000244|PDB:4A15}. FT HELIX 407 409 {ECO:0000244|PDB:5H8W}. FT HELIX 412 429 {ECO:0000244|PDB:4A15}. FT STRAND 433 438 {ECO:0000244|PDB:4A15}. FT HELIX 440 446 {ECO:0000244|PDB:4A15}. FT HELIX 464 473 {ECO:0000244|PDB:4A15}. FT STRAND 479 483 {ECO:0000244|PDB:4A15}. FT STRAND 489 491 {ECO:0000244|PDB:5H8W}. FT HELIX 496 498 {ECO:0000244|PDB:5H8W}. FT STRAND 501 506 {ECO:0000244|PDB:4A15}. FT HELIX 514 527 {ECO:0000244|PDB:4A15}. FT HELIX 530 534 {ECO:0000244|PDB:4A15}. FT HELIX 536 548 {ECO:0000244|PDB:4A15}. FT STRAND 553 555 {ECO:0000244|PDB:2VSF}. FT STRAND 558 563 {ECO:0000244|PDB:4A15}. FT HELIX 565 573 {ECO:0000244|PDB:4A15}. FT STRAND 578 581 {ECO:0000244|PDB:4A15}. FT HELIX 583 595 {ECO:0000244|PDB:4A15}. SQ SEQUENCE 602 AA; 69169 MW; CE13FA7D1F3A0DD8 CRC64; MQKSYGVALE SPTGSGKTIM ALKSALQYSS ERKLKVLYLV RTNSQEEQVI KELRSLSSTM KIRAIPMQGR VNMCILYRMV DDLHEINAES LAKFCNMKKR EVMAGNEAAC PYFNFKIRSD ETKRFLFDEL PTAEEFYDYG ERNNVCPYES MKAALPDADI VIAPYAYFLN RSVAEKFLSH WGVSRNQIVI ILDEAHNLPD IGRSIGSFRI SVESLNRADR EAQAYGDPEL SQKIHVSDLI EMIRSALQSM VSERCGKGDV RIRFQEFMEY MRIMNKRSER EIRSLLNYLY LFGEYVENEK EKVGKVPFSY CSSVASRIIA FSDQDEEKYA AILSPEDGGY MQAACLDPSG ILEVLKESKT IHMSGTLDPF DFYSDITGFE IPFKKIGEIF PPENRYIAYY DGVSSKYDTL DEKELDRMAT VIEDIILKVK KNTIVYFPSY SLMDRVENRV SFEHMKEYRG IDQKELYSML KKFRRDHGTI FAVSGGRLSE GINFPGNELE MIILAGLPFP RPDAINRSLF DYYERKYGKG WEYSVVYPTA IKIRQEIGRL IRSAEDTGAC VILDKRAGQF RKFIPDMKKT SDPASDIYNF FISAQAREKY GA //