TBLASTN 2.8.1+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Database: X5.fasta
           1,868 sequences; 23,962,143 total letters



Query= CYC_NEUCR P00048 Cytochrome c

Length=108
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  scaffold-282                                                        142     7e-41
  scaffold-287                                                        122     9e-34


> scaffold-282
Length=195711

 Score = 142 bits (358),  Expect = 7e-41, Method: Compositional matrix adjust.
 Identities = 75/148 (51%), Positives = 89/148 (60%), Gaps = 40/148 (27%)
 Frame = -1

Query  1      MGFSAGDSKKGANLFKTRCAQCHTLE-------------------------EGGGNKI--  33
              MG   G++KKGA LF TRCAQCHTLE                         + G + I  
Sbjct  48708  MGIPQGNTKKGAKLF*TRCAQCHTLEAVRICIFIICMSDI*FIYYHVGTTAQAGYDPIHL  48529

Query  34     -------------GPALHGLFGRKTGSVDGYAYTDANKQKGITWDENTLFEYLENPKKYI  80
                           GP LHGLFGRKTG  +GY+YT AN  KGITW E+TLFEYLENPKKYI
Sbjct  48528  TSLLQLASSLHYVGPNLHGLFGRKTGQAEGYSYTAANVNKGITWSEDTLFEYLENPKKYI  48349

Query  81     PGTKMAFGGLKKDKDRNDIITFMKEATA  108
              PGTKMAF GLKK ++R D+I ++K+AT+
Sbjct  48348  PGTKMAFAGLKKPEERADLIAYLKQATS  48265


> scaffold-287
Length=687983

 Score = 122 bits (305),  Expect = 9e-34, Method: Compositional matrix adjust.
 Identities = 54/76 (71%), Positives = 65/76 (86%), Gaps = 0/76 (0%)
 Frame = +1

Query  33      IGPALHGLFGRKTGSVDGYAYTDANKQKGITWDENTLFEYLENPKKYIPGTKMAFGGLKK  92
               +GP LHGLFGRKTG  +GY+YT AN  KGITW E+TLFEYLENPKKYIPGTKMAF GLKK
Sbjct  469885  VGPNLHGLFGRKTGQAEGYSYTAANVNKGITWSEDTLFEYLENPKKYIPGTKMAFAGLKK  470064

Query  93      DKDRNDIITFMKEATA  108
                ++R D+I ++K+AT+
Sbjct  470065  PEERADLIAYLKQATS  470112


 Score = 43.5 bits (101),  Expect = 4e-06, Method: Compositional matrix adjust.
 Identities = 19/26 (73%), Positives = 21/26 (81%), Gaps = 0/26 (0%)
 Frame = +3

Query  1       MGFSAGDSKKGANLFKTRCAQCHTLE  26
               MG   G++KKGA LF TRCAQCHTLE
Sbjct  469659  MGIPQGNTKKGAKLF*TRCAQCHTLE  469736



Lambda      K        H        a         alpha
   0.315    0.136    0.410    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 195808425


  Database: X5.fasta
    Posted date:  Nov 15, 2021  9:19 AM
  Number of letters in database: 23,962,143
  Number of sequences in database:  1,868



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 13
Window for multiple hits: 40