##gff-version 3 ##sequence-region 1 4641652 #!Date 2017-11-06 #!Type DNA #!Source-version EMBOSS 6.6.0.0 EMBL databank_entry 1 4641652 . + . ID=.1;organism=Escherichia coli str. K-12 substr. MG1655;mol_type=genomic DNA;strain=K-12;sub_strain=MG1655;db_xref=taxon:511145 EMBL gene 190 255 . + . ID=.2;gene=thrL;locus_tag=b0001;gene_synonym=ECK0001;gene_synonym=JW4367;db_xref=EcoGene:EG11277 EMBL CDS 190 255 . + 0 ID=.3;gene=thrL;locus_tag=b0001;gene_synonym=ECK0001;gene_synonym=JW4367;function=leader%3B Amino acid biosynthesis: Threonine;note=GO_process: GO:0009088 - threonine biosynthetic process;codon_start=1;transl_table=11;product=thr operon leader peptide;protein_id=AAC73112.1;db_xref=GI:1786182;db_xref=ASAP:ABE-0000006;db_xref=UniProtKB/Swiss-Prot:P0AD86;db_xref=EcoGene:EG11277 EMBL gene 337 2799 . + . ID=.4;gene=thrA;locus_tag=b0002;gene_synonym=ECK0002;gene_synonym=Hs;gene_synonym=JW0001;gene_synonym=thrA1;gene_synonym=thrA2;gene_synonym=thrD;db_xref=EcoGene:EG10998 EMBL CDS 337 2799 . + 0 ID=.5;gene=thrA;locus_tag=b0002;gene_synonym=ECK0002;gene_synonym=Hs;gene_synonym=JW0001;gene_synonym=thrA1;gene_synonym=thrA2;gene_synonym=thrD;ec_number=1.1.1.3;ec_number=2.7.2.4;function=enzyme%3B Amino acid biosynthesis: Threonine;experiment=N-terminus verified by Edman degradation: PMID 354697%2C4562989;note=bifunctional: aspartokinase I (N-terminal)%3B homoserine dehydrogenase I (C-terminal)%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009088 - threonine biosynthetic process%3B GO_process: GO:0009086 - methionine biosynthetic process%3B GO_process: GO:0009090 - homoserine biosynthetic process;codon_start=1;transl_table=11;product=Bifunctional aspartokinase/homoserine dehydrogenase 1;protein_id=AAC73113.1;db_xref=GI:1786183;db_xref=ASAP:ABE-0000008;db_xref=UniProtKB/Swiss-Prot:P00561;db_xref=EcoGene:EG10998 EMBL gene 2801 3733 . + . ID=.6;gene=thrB;locus_tag=b0003;gene_synonym=ECK0003;gene_synonym=JW0002;db_xref=EcoGene:EG10999 EMBL CDS 2801 3733 . + 0 ID=.7;gene=thrB;locus_tag=b0003;gene_synonym=ECK0003;gene_synonym=JW0002;ec_number=2.7.1.39;function=enzyme%3B Amino acid biosynthesis: Threonine;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009088 - threonine biosynthetic process;codon_start=1;transl_table=11;product=homoserine kinase;protein_id=AAC73114.1;db_xref=GI:1786184;db_xref=ASAP:ABE-0000010;db_xref=UniProtKB/Swiss-Prot:P00547;db_xref=EcoGene:EG10999 EMBL gene 3734 5020 . + . ID=.8;gene=thrC;locus_tag=b0004;gene_synonym=ECK0004;gene_synonym=JW0003;db_xref=EcoGene:EG11000 EMBL CDS 3734 5020 . + 0 ID=.9;gene=thrC;locus_tag=b0004;gene_synonym=ECK0004;gene_synonym=JW0003;ec_number=4.2.3.1;function=enzyme%3B Amino acid biosynthesis: Threonine;experiment=N-terminus verified by Edman degradation: PMID 9298646%2C9600841%2C9740056;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009088 - threonine biosynthetic process;codon_start=1;transl_table=11;product=L-threonine synthase;protein_id=AAC73115.1;db_xref=GI:1786185;db_xref=ASAP:ABE-0000012;db_xref=UniProtKB/Swiss-Prot:P00934;db_xref=EcoGene:EG11000 EMBL gene 5234 5530 . + . ID=.10;gene=yaaX;locus_tag=b0005;gene_synonym=ECK0005;gene_synonym=JW0004;db_xref=EcoGene:EG14384 EMBL CDS 5234 5530 . + 0 ID=.11;gene=yaaX;locus_tag=b0005;gene_synonym=ECK0005;gene_synonym=JW0004;codon_start=1;transl_table=11;product=DUF2502 family putative periplasmic protein;protein_id=AAC73116.1;db_xref=GI:1786186;db_xref=ASAP:ABE-0000015;db_xref=UniProtKB/Swiss-Prot:P75616;db_xref=EcoGene:EG14384 EMBL repeat_region 5565 5669 . + . ID=.12;note=RIP1 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 5683 6459 . - . ID=.13;gene=yaaA;locus_tag=b0006;gene_synonym=ECK0006;gene_synonym=JW0005;db_xref=EcoGene:EG10011 EMBL CDS 5683 6459 . - 0 ID=.14;gene=yaaA;locus_tag=b0006;gene_synonym=ECK0006;gene_synonym=JW0005;codon_start=1;transl_table=11;product=peroxide resistance protein%2C lowers intracellular iron;protein_id=AAC73117.1;db_xref=GI:1786187;db_xref=ASAP:ABE-0000018;db_xref=UniProtKB/Swiss-Prot:P0A8I3;db_xref=EcoGene:EG10011 EMBL gene 6529 7959 . - . ID=.15;gene=yaaJ;locus_tag=b0007;gene_synonym=ECK0007;gene_synonym=JW0006;db_xref=EcoGene:EG11555 EMBL CDS 6529 7959 . - 0 ID=.16;gene=yaaJ;locus_tag=b0007;gene_synonym=ECK0007;gene_synonym=JW0006;function=putative transport%3B Transport of small molecules: Amino acids%2C amines;note=inner membrane transport protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative transporter;protein_id=AAC73118.1;db_xref=GI:1786188;db_xref=ASAP:ABE-0000020;db_xref=UniProtKB/Swiss-Prot:P30143;db_xref=EcoGene:EG11555 EMBL gene 8238 9191 . + . ID=.17;gene=talB;locus_tag=b0008;gene_synonym=ECK0008;gene_synonym=JW0007;gene_synonym=yaaK;db_xref=EcoGene:EG11556 EMBL CDS 8238 9191 . + 0 ID=.18;gene=talB;locus_tag=b0008;gene_synonym=ECK0008;gene_synonym=JW0007;gene_synonym=yaaK;ec_number=2.2.1.2;function=enzyme%3B Central intermediary metabolism: Non-oxidative branch%2C pentose pathway;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009052 - pentose-phosphate shunt%2C non-oxidative branch;codon_start=1;transl_table=11;product=transaldolase B;protein_id=AAC73119.1;db_xref=GI:1786189;db_xref=ASAP:ABE-0000027;db_xref=UniProtKB/Swiss-Prot:P0A870;db_xref=EcoGene:EG11556 EMBL gene 9306 9893 . + . ID=.19;gene=mog;locus_tag=b0009;gene_synonym=bisD;gene_synonym=chlG;gene_synonym=ECK0009;gene_synonym=JW0008;gene_synonym=mogA;gene_synonym=yaaG;db_xref=EcoGene:EG11511 EMBL CDS 9306 9893 . + 0 ID=.20;gene=mog;locus_tag=b0009;gene_synonym=bisD;gene_synonym=chlG;gene_synonym=ECK0009;gene_synonym=JW0008;gene_synonym=mogA;gene_synonym=yaaG;function=transport%3B Biosynthesis of cofactors%2C carriers: Molybdopterin;note=putative molybdochetalase in molybdopterine biosynthesis%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006777 - Mo-molybdopterin cofactor biosynthetic process;codon_start=1;transl_table=11;product=molybdochelatase incorporating molybdenum into molybdopterin;protein_id=AAC73120.1;db_xref=GI:1786190;db_xref=ASAP:ABE-0000030;db_xref=UniProtKB/Swiss-Prot:P0AF03;db_xref=EcoGene:EG11511 EMBL gene 9928 10494 . - . ID=.21;gene=satP;locus_tag=b0010;gene_synonym=ECK0010;gene_synonym=JW0009;gene_synonym=yaaH;db_xref=EcoGene:EG11512 EMBL CDS 9928 10494 . - 0 ID=.22;gene=satP;locus_tag=b0010;gene_synonym=ECK0010;gene_synonym=JW0009;gene_synonym=yaaH;codon_start=1;transl_table=11;product=succinate-acetate transporter;protein_id=AAC73121.1;db_xref=GI:1786191;db_xref=ASAP:ABE-0000032;db_xref=UniProtKB/Swiss-Prot:P0AC98;db_xref=EcoGene:EG11512 EMBL gene 10643 11356 . - . ID=.23;gene=yaaW;locus_tag=b0011;gene_synonym=ECK0011;gene_synonym=JW0010;db_xref=EcoGene:EG14340 EMBL CDS 10643 11356 . - 0 ID=.24;gene=yaaW;locus_tag=b0011;gene_synonym=ECK0011;gene_synonym=JW0010;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=UPF0174 family protein;protein_id=AAC73122.1;db_xref=GI:1786193;db_xref=ASAP:ABE-0000037;db_xref=UniProtKB/Swiss-Prot:P75617;db_xref=EcoGene:EG14340 EMBL gene 11382 11786 . - . ID=.25;gene=yaaI;locus_tag=b0013;gene_synonym=ECK0013;gene_synonym=JW0012;db_xref=EcoGene:EG11513 EMBL CDS 11382 11786 . - 0 ID=.26;gene=yaaI;locus_tag=b0013;gene_synonym=ECK0013;gene_synonym=JW0012;codon_start=1;transl_table=11;product=UPF0412 family protein;protein_id=AAC73124.1;db_xref=GI:1786195;db_xref=ASAP:ABE-0000043;db_xref=UniProtKB/Swiss-Prot:P28696;db_xref=EcoGene:EG11513 EMBL gene 12163 14079 . + . ID=.27;gene=dnaK;locus_tag=b0014;gene_synonym=ECK0014;gene_synonym=groPAB;gene_synonym=groPC;gene_synonym=groPF;gene_synonym=grpC;gene_synonym=grpF;gene_synonym=JW0013;gene_synonym=seg;db_xref=EcoGene:EG10241 EMBL CDS 12163 14079 . + 0 ID=.28;gene=dnaK;locus_tag=b0014;gene_synonym=ECK0014;gene_synonym=groPAB;gene_synonym=groPC;gene_synonym=groPF;gene_synonym=grpC;gene_synonym=grpF;gene_synonym=JW0013;gene_synonym=seg;function=factor%3B Chaperones;note=chaperone Hsp70%3B DNA biosynthesis%3B autoregulated heat shock proteins%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006457 - protein folding%3B GO_process: GO:0006970 - response to osmotic stress;codon_start=1;transl_table=11;product=chaperone Hsp70%2C with co-chaperone DnaJ;protein_id=AAC73125.1;db_xref=GI:1786196;db_xref=ASAP:ABE-0000052;db_xref=UniProtKB/Swiss-Prot:P0A6Y8;db_xref=EcoGene:EG10241 EMBL gene 14168 15298 . + . ID=.29;gene=dnaJ;locus_tag=b0015;gene_synonym=ECK0015;gene_synonym=faa;gene_synonym=groP;gene_synonym=grpC;gene_synonym=JW0014;db_xref=EcoGene:EG10240 EMBL CDS 14168 15298 . + 0 ID=.30;gene=dnaJ;locus_tag=b0015;gene_synonym=ECK0015;gene_synonym=faa;gene_synonym=groP;gene_synonym=grpC;gene_synonym=JW0014;function=factor%3B Chaperones;note=chaperone with DnaK%3B heat shock protein%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=chaperone Hsp40%2C DnaK co-chaperone;protein_id=AAC73126.1;db_xref=GI:1786197;db_xref=ASAP:ABE-0000054;db_xref=UniProtKB/Swiss-Prot:P08622;db_xref=EcoGene:EG10240 EMBL sequence_feature 15387 16731 . + . ID=.31;note=*mobile_element_type: insertion sequence:IS186A EMBL gene 15445 16557 . + . ID=.32;gene=insL1;locus_tag=b0016;gene_synonym=ECK0016;db_xref=EcoGene:EG40012 EMBL CDS 15445 16557 . + 0 ID=.33;gene=insL1;locus_tag=b0016;gene_synonym=ECK0016;function=IS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;codon_start=1;transl_table=11;product=IS186 transposase;protein_id=AAC73127.1;db_xref=GI:1786198;db_xref=ASAP:ABE-0000058;db_xref=UniProtKB/Swiss-Prot:P0CF91;db_xref=EcoGene:EG40012 EMBL gene 16751 16960 . - . ID=.34;gene=mokC;locus_tag=b0018;gene_synonym=ECK4466;gene_synonym=gefL;db_xref=EcoGene:EG12074 EMBL CDS 16751 16960 . - 0 ID=.35;gene=mokC;locus_tag=b0018;gene_synonym=ECK4466;gene_synonym=gefL;note=regulatory peptide whose translation enables hokC (gef) expression%3B completely contained in another CDS;codon_start=1;transl_table=11;product=regulatory protein for HokC%2C overlaps CDS of hokC;protein_id=AAC73129.1;db_xref=GI:1786200;db_xref=ASAP:ABE-0000064;db_xref=UniProtKB/Swiss-Prot:P33236;db_xref=EcoGene:EG12074 EMBL gene 16751 16903 . - . ID=.36;gene=hokC;locus_tag=b4412;gene_synonym=ECK0018;gene_synonym=gef;gene_synonym=JW5879;db_xref=EcoGene:EG10373 EMBL CDS 16751 16903 . - 0 ID=.37;gene=hokC;locus_tag=b4412;gene_synonym=ECK0018;gene_synonym=gef;gene_synonym=JW5879;note=small toxic membrane polypeptide%3B completely contained in another CDS;codon_start=1;transl_table=11;product=toxic membrane protein%2C small;protein_id=AAT48122.1;db_xref=GI:48994874;db_xref=ASAP:ABE-0047278;db_xref=UniProtKB/Swiss-Prot:P0ACG4;db_xref=EcoGene:EG10373 EMBL gene 16952 17006 . + . ID=.38;gene=sokC;locus_tag=b4413;gene_synonym=ECK0019;gene_synonym=JWR0224;gene_synonym=sof;db_xref=EcoGene:EG31128 EMBL ncRNA 16952 17006 . + . ID=.39;ncrna_class=antisense_RNA;gene=sokC;locus_tag=b4413;gene_synonym=ECK0019;gene_synonym=JWR0224;gene_synonym=sof;product=sRNA antisense regulator blocking mokC%2C and hence hokC%2C translation;note=IS186A interrupts hokC transcript downstream of hokC gene in K-12;function=component of addiction module;db_xref=ASAP:ABE-0047238;db_xref=EcoGene:EG31128 EMBL gene 17489 18655 . + . ID=.40;gene=nhaA;locus_tag=b0019;gene_synonym=ant;gene_synonym=antA;gene_synonym=ECK0020;gene_synonym=JW0018;db_xref=EcoGene:EG10652 EMBL CDS 17489 18655 . + 0 ID=.41;gene=nhaA;locus_tag=b0019;gene_synonym=ant;gene_synonym=antA;gene_synonym=ECK0020;gene_synonym=JW0018;function=transport%3B Transport of small molecules: Cations;experiment=N-terminus verified by Edman degradation: PMID 8381959;note=Na+/H antiporter%2C pH dependent%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009268 - response to pH;codon_start=1;transl_table=11;product=sodium-proton antiporter;protein_id=AAC73130.1;db_xref=GI:1786201;db_xref=ASAP:ABE-0000068;db_xref=UniProtKB/Swiss-Prot:P13738;db_xref=EcoGene:EG10652 EMBL gene 18715 19620 . + . ID=.42;gene=nhaR;locus_tag=b0020;gene_synonym=antO;gene_synonym=ECK0021;gene_synonym=JW0019;gene_synonym=yaaB;db_xref=EcoGene:EG11078 EMBL CDS 18715 19620 . + 0 ID=.43;gene=nhaR;locus_tag=b0020;gene_synonym=antO;gene_synonym=ECK0021;gene_synonym=JW0019;gene_synonym=yaaB;function=regulator%3B Transport of small molecules: Cations;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0006350 - transcription%3B GO_process: GO:0009268 - response to pH;codon_start=1;transl_table=11;product=transcriptional activator of nhaA;protein_id=AAC73131.1;db_xref=GI:1786202;db_xref=ASAP:ABE-0000072;db_xref=UniProtKB/Swiss-Prot:P0A9G2;db_xref=EcoGene:EG11078 EMBL sequence_feature 19796 20563 . - . ID=.44;note=*mobile_element_type: insertion sequence:IS1A EMBL gene 19811 20314 . - . ID=.45;gene=insB1;locus_tag=b0021;gene_synonym=ECK0022;db_xref=EcoGene:EG40002 EMBL CDS 19811 20314 . - 0 ID=.46;gene=insB1;locus_tag=b0021;gene_synonym=ECK0022;function=IS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;codon_start=1;transl_table=11;product=IS1 transposase B;protein_id=AAC73132.1;db_xref=GI:1786203;db_xref=ASAP:ABE-0000075;db_xref=UniProtKB/Swiss-Prot:P0CF25;db_xref=EcoGene:EG40002 EMBL gene 20233 20508 . - . ID=.47;gene=insA;locus_tag=b0022;gene_synonym=ECK0023;note=insA1;db_xref=EcoGene:EG40001 EMBL CDS 20233 20508 . - 0 ID=.48;gene=insA;locus_tag=b0022;gene_synonym=ECK0023;function=IS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;codon_start=1;transl_table=11;product=IS1 repressor TnpA;protein_id=AAC73133.1;db_xref=GI:1786204;db_xref=ASAP:ABE-0000078;db_xref=UniProtKB/Swiss-Prot:P0CF07;db_xref=EcoGene:EG40001 EMBL gene 20815 21078 . - . ID=.49;gene=rpsT;locus_tag=b0023;gene_synonym=ECK0024;gene_synonym=JW0022;gene_synonym=sup;db_xref=EcoGene:EG10919 EMBL CDS 20815 21078 . - 0 ID=.50;gene=rpsT;locus_tag=b0023;gene_synonym=ECK0024;gene_synonym=JW0022;gene_synonym=sup;function=structural component%3B Ribosomal proteins - synthesis%2C modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0003735 - structural constituent of ribosome%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=30S ribosomal subunit protein S20;protein_id=AAC73134.1;db_xref=GI:1786206;db_xref=ASAP:ABE-0000082;db_xref=UniProtKB/Swiss-Prot:P0A7U7;db_xref=EcoGene:EG10919 EMBL gene 21181 21399 . + . ID=.51;gene=yaaY;locus_tag=b0024;gene_synonym=ECK0025;gene_synonym=JW5003;db_xref=EcoGene:EG14386 EMBL CDS 21181 21399 . + 0 ID=.52;gene=yaaY;locus_tag=b0024;gene_synonym=ECK0025;gene_synonym=JW5003;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC73135.1;db_xref=GI:1786207;db_xref=ASAP:ABE-0000089;db_xref=UniProtKB/Swiss-Prot:P75620;db_xref=EcoGene:EG14386 EMBL gene 21407 22348 . + . ID=.53;gene=ribF;locus_tag=b0025;gene_synonym=ECK0026;gene_synonym=JW0023;gene_synonym=yaaC;db_xref=EcoGene:EG11079 EMBL CDS 21407 22348 . + 0 ID=.54;gene=ribF;locus_tag=b0025;gene_synonym=ECK0026;gene_synonym=JW0023;gene_synonym=yaaC;ec_number=2.7.1.26;ec_number=2.7.7.2;function=putative regulator%3B Not classified;note=GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=AAC73136.1;db_xref=GI:1786208;db_xref=ASAP:ABE-0000091;db_xref=UniProtKB/Swiss-Prot:P0AG40;db_xref=EcoGene:EG11079 EMBL gene 22391 25207 . + . ID=.55;gene=ileS;locus_tag=b0026;gene_synonym=ECK0027;gene_synonym=ilvS;gene_synonym=JW0024;db_xref=EcoGene:EG10492 EMBL CDS 22391 25207 . + 0 ID=.56;gene=ileS;locus_tag=b0026;gene_synonym=ECK0027;gene_synonym=ilvS;gene_synonym=JW0024;ec_number=6.1.1.5;function=enzyme%3B Aminoacyl tRNA synthetases%2C tRNA modification;note=isoleucine tRNA synthetase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006418 - tRNA aminoacylation for protein translation;codon_start=1;transl_table=11;product=isoleucyl-tRNA synthetase;protein_id=AAC73137.1;db_xref=GI:2367096;db_xref=ASAP:ABE-0000094;db_xref=UniProtKB/Swiss-Prot:P00956;db_xref=EcoGene:EG10492 EMBL gene 25207 25701 . + . ID=.57;gene=lspA;locus_tag=b0027;gene_synonym=ECK0028;gene_synonym=JW0025;db_xref=EcoGene:EG10548 EMBL CDS 25207 25701 . + 0 ID=.58;gene=lspA;locus_tag=b0027;gene_synonym=ECK0028;gene_synonym=JW0025;ec_number=3.4.23.36;function=enzyme%3B Protein%2C peptide secretion;note=prolipoprotein signal peptidase (SPase II)%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=prolipoprotein signal peptidase (signal peptidase II);protein_id=AAC73138.1;db_xref=GI:1786210;db_xref=ASAP:ABE-0000096;db_xref=UniProtKB/Swiss-Prot:P00804;db_xref=EcoGene:EG10548 EMBL repeat_region 25710 25795 . + . ID=.59;note=REP2 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 25826 26275 . + . ID=.60;gene=fkpB;locus_tag=b0028;gene_synonym=ECK0029;gene_synonym=JW0026;gene_synonym=slpA;gene_synonym=yaaD;db_xref=EcoGene:EG11080 EMBL CDS 25826 26275 . + 0 ID=.61;gene=fkpB;locus_tag=b0028;gene_synonym=ECK0029;gene_synonym=JW0026;gene_synonym=slpA;gene_synonym=yaaD;ec_number=5.2.1.8;function=putative enzyme%3B Proteins - translation and modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase);protein_id=AAC73139.1;db_xref=GI:1786211;db_xref=ASAP:ABE-0000101;db_xref=UniProtKB/Swiss-Prot:P0AEM0;db_xref=EcoGene:EG11080 EMBL gene 26277 27227 . + . ID=.62;gene=ispH;locus_tag=b0029;gene_synonym=ECK0030;gene_synonym=JW0027;gene_synonym=lytB;gene_synonym=yaaE;db_xref=EcoGene:EG11081 EMBL CDS 26277 27227 . + 0 ID=.63;gene=ispH;locus_tag=b0029;gene_synonym=ECK0030;gene_synonym=JW0027;gene_synonym=lytB;gene_synonym=yaaE;ec_number=1.17.1.2;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase%2C 4Fe-4S protein;protein_id=AAC73140.1;db_xref=GI:1786212;db_xref=ASAP:ABE-0000103;db_xref=UniProtKB/Swiss-Prot:P62623;db_xref=EcoGene:EG11081 EMBL gene 27293 28207 . + . ID=.64;gene=rihC;locus_tag=b0030;gene_synonym=ECK0031;gene_synonym=JW0028;gene_synonym=yaaF;db_xref=EcoGene:EG11082 EMBL CDS 27293 28207 . + 0 ID=.65;gene=rihC;locus_tag=b0030;gene_synonym=ECK0031;gene_synonym=JW0028;gene_synonym=yaaF;ec_number=3.2.2.-;note=GO_process: GO:0009226 - nucleotide-sugar biosynthetic process;codon_start=1;transl_table=11;product=ribonucleoside hydrolase 3;protein_id=AAC73141.1;db_xref=GI:1786213;db_xref=ASAP:ABE-0000109;db_xref=UniProtKB/Swiss-Prot:P22564;db_xref=EcoGene:EG11082 EMBL gene 28374 29195 . + . ID=.66;gene=dapB;locus_tag=b0031;gene_synonym=ECK0032;gene_synonym=JW0029;db_xref=EcoGene:EG10206 EMBL CDS 28374 29195 . + 0 ID=.67;gene=dapB;locus_tag=b0031;gene_synonym=ECK0032;gene_synonym=JW0029;ec_number=1.17.1.8;function=enzyme%3B Amino acid biosynthesis: Lysine;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009089 - lysine biosynthetic process via diaminopimelate;codon_start=1;transl_table=11;product=dihydrodipicolinate reductase;protein_id=AAC73142.1;db_xref=GI:1786214;db_xref=ASAP:ABE-0000112;db_xref=UniProtKB/Swiss-Prot:P04036;db_xref=EcoGene:EG10206 EMBL gene 29651 30799 . + . ID=.68;gene=carA;locus_tag=b0032;gene_synonym=arg;gene_synonym=cap;gene_synonym=ECK0033;gene_synonym=JW0030;gene_synonym=pyrA;db_xref=EcoGene:EG10134 EMBL CDS 29651 30799 . + 0 ID=.69;gene=carA;locus_tag=b0032;gene_synonym=arg;gene_synonym=cap;gene_synonym=ECK0033;gene_synonym=JW0030;gene_synonym=pyrA;ec_number=6.3.5.5;function=enzyme%3B Pyrimidine ribonucleotide biosynthesis;experiment=N-terminus verified by Edman degradation: PMID 3894020%2C9298646%2C9740056;note=GO_process: GO:0006526 - arginine biosynthetic process%3B GO_process: GO:0006221 - pyrimidine nucleotide biosynthetic process;codon_start=1;transl_table=11;product=carbamoyl phosphate synthetase small subunit%2C glutamine amidotransferase;protein_id=AAC73143.1;db_xref=GI:1786215;db_xref=ASAP:ABE-0000118;db_xref=UniProtKB/Swiss-Prot:P0A6F1;db_xref=EcoGene:EG10134 EMBL gene 30817 34038 . + . ID=.70;gene=carB;locus_tag=b0033;gene_synonym=cap;gene_synonym=ECK0034;gene_synonym=JW0031;gene_synonym=pyrA;db_xref=EcoGene:EG10135 EMBL CDS 30817 34038 . + 0 ID=.71;gene=carB;locus_tag=b0033;gene_synonym=cap;gene_synonym=ECK0034;gene_synonym=JW0031;gene_synonym=pyrA;ec_number=6.3.5.5;function=enzyme%3B Pyrimidine ribonucleotide biosynthesis;note=GO_process: GO:0006526 - arginine biosynthetic process%3B GO_process: GO:0006221 - pyrimidine nucleotide biosynthetic process;codon_start=1;transl_table=11;product=carbamoyl-phosphate synthase large subunit;protein_id=AAC73144.1;db_xref=GI:1786216;db_xref=ASAP:ABE-0000121;db_xref=UniProtKB/Swiss-Prot:P00968;db_xref=EcoGene:EG10135 EMBL gene 34300 34695 . + . ID=.72;gene=caiF;locus_tag=b0034;gene_synonym=ECK0035;gene_synonym=JW0033;db_xref=EcoGene:EG13451 EMBL CDS 34300 34695 . + 0 ID=.73;gene=caiF;locus_tag=b0034;gene_synonym=ECK0035;gene_synonym=JW0033;function=regulator%3B Central intermediary metabolism: Pool%2C multipurpose conversions;note=transcriptional regulator of cai operon%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0009310 - amine catabolic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=cai operon transcriptional activator;protein_id=AAC73145.2;db_xref=GI:87081680;db_xref=ASAP:ABE-0000125;db_xref=UniProtKB/Swiss-Prot:P0AE58;db_xref=EcoGene:EG13451 EMBL repeat_region 34727 34762 . + . ID=.74;note=REP3 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 34781 35371 . - . ID=.75;gene=caiE;locus_tag=b0035;gene_synonym=ECK0036;gene_synonym=JW5004;db_xref=EcoGene:EG12608 EMBL CDS 34781 35371 . - 0 ID=.76;gene=caiE;locus_tag=b0035;gene_synonym=ECK0036;gene_synonym=JW5004;function=putative enzyme%3B Central intermediary metabolism: Pool%2C multipurpose conversions;note=possible synthesis of cofactor for carnitine racemase and dehydratase%3B GO_process: GO:0009310 - amine catabolic process%3B GO_process: GO:0042413 - carnitine catabolic process;codon_start=1;transl_table=11;product=stimulator of CaiD and CaiB enzyme activities;protein_id=AAC73146.2;db_xref=GI:87081681;db_xref=ASAP:ABE-0000128;db_xref=UniProtKB/Swiss-Prot:P39206;db_xref=EcoGene:EG12608 EMBL gene 35377 36162 . - . ID=.77;gene=caiD;locus_tag=b0036;gene_synonym=ECK0037;gene_synonym=JW0035;gene_synonym=yaaL;db_xref=EcoGene:EG11557 EMBL CDS 35377 36162 . - 0 ID=.78;gene=caiD;locus_tag=b0036;gene_synonym=ECK0037;gene_synonym=JW0035;gene_synonym=yaaL;ec_number=4.2.1.-;function=enzyme%3B Degradation of small molecules: Amines;note=carnitine racemase%3B GO_process: GO:0009310 - amine catabolic process%3B GO_process: GO:0042413 - carnitine catabolic process;codon_start=1;transl_table=11;product=carnitinyl-CoA dehydratase;protein_id=AAC73147.2;db_xref=GI:221142681;db_xref=ASAP:ABE-0000130;db_xref=UniProtKB/Swiss-Prot:P31551;db_xref=EcoGene:EG11557 EMBL gene 36271 37824 . - . ID=.79;gene=caiC;locus_tag=b0037;gene_synonym=ECK0038;gene_synonym=JW0036;gene_synonym=yaaM;db_xref=EcoGene:EG11558 EMBL CDS 36271 37824 . - 0 ID=.80;gene=caiC;locus_tag=b0037;gene_synonym=ECK0038;gene_synonym=JW0036;gene_synonym=yaaM;ec_number=6.3.2.-;function=putative enzyme%3B Central intermediary metabolism: Pool%2C multipurpose conversions;note=probable crotonobetaine/carnitine-CoA ligase%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009310 - amine catabolic process;codon_start=1;transl_table=11;product=putative crotonobetaine/carnitine-CoA ligase;protein_id=AAC73148.2;db_xref=GI:221142682;db_xref=ASAP:ABE-0000133;db_xref=UniProtKB/Swiss-Prot:P31552;db_xref=EcoGene:EG11558 EMBL gene 37898 39115 . - . ID=.81;gene=caiB;locus_tag=b0038;gene_synonym=ECK0039;gene_synonym=JW0037;gene_synonym=yaaN;db_xref=EcoGene:EG11559 EMBL CDS 37898 39115 . - 0 ID=.82;gene=caiB;locus_tag=b0038;gene_synonym=ECK0039;gene_synonym=JW0037;gene_synonym=yaaN;ec_number=2.8.3.-;function=enzyme%3B Central intermediary metabolism: Pool%2C multipurpose conversions;experiment=N-terminus verified by Edman degradation: PMID 8188598%2C10209289;note=l-carnitine dehydratase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0042413 - carnitine catabolic process%3B GO_process: GO:0009310 - amine catabolic process;codon_start=1;transl_table=11;product=crotonobetainyl CoA:carnitine CoA transferase;protein_id=AAC73149.1;db_xref=GI:1786222;db_xref=ASAP:ABE-0000136;db_xref=UniProtKB/Swiss-Prot:P31572;db_xref=EcoGene:EG11559 EMBL repeat_region 39151 39232 . + . ID=.83;note=REP4 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 39244 40386 . - . ID=.84;gene=caiA;locus_tag=b0039;gene_synonym=ECK0040;gene_synonym=JW0038;gene_synonym=yaaO;db_xref=EcoGene:EG11560 EMBL CDS 39244 40386 . - 0 ID=.85;gene=caiA;locus_tag=b0039;gene_synonym=ECK0040;gene_synonym=JW0038;gene_synonym=yaaO;ec_number=1.3.99.-;function=putative regulator%3B Central intermediary metabolism: Pool%2C multipurpose conversions;experiment=N-terminus verified by Edman degradation: PMID 10209289;note=probable carnitine operon oxidoreductase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006097 - glyoxylate cycle%3B GO_process: GO:0009310 - amine catabolic process%3B GO_process: GO:0042413 - carnitine catabolic process;codon_start=1;transl_table=11;product=crotonobetaine reductase subunit II%2C FAD-binding;protein_id=AAC73150.1;db_xref=GI:1786223;db_xref=ASAP:ABE-0000139;db_xref=UniProtKB/Swiss-Prot:P60584;db_xref=EcoGene:EG11560 EMBL gene 40417 41931 . - . ID=.86;gene=caiT;locus_tag=b0040;gene_synonym=ECK0041;gene_synonym=JW0039;gene_synonym=yaaP;db_xref=EcoGene:EG11561 EMBL CDS 40417 41931 . - 0 ID=.87;gene=caiT;locus_tag=b0040;gene_synonym=ECK0041;gene_synonym=JW0039;gene_synonym=yaaP;function=putative transport%3B Central intermediary metabolism: Pool%2C multipurpose conversions;note=probable carnitine transporter%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=putative transporter;protein_id=AAC73151.1;db_xref=GI:1786224;db_xref=ASAP:ABE-0000141;db_xref=UniProtKB/Swiss-Prot:P31553;db_xref=EcoGene:EG11561 EMBL gene 42403 43173 . + . ID=.88;gene=fixA;locus_tag=b0041;gene_synonym=ECK0042;gene_synonym=JW0040;gene_synonym=yaaQ;db_xref=EcoGene:EG11562 EMBL CDS 42403 43173 . + 0 ID=.89;gene=fixA;locus_tag=b0041;gene_synonym=ECK0042;gene_synonym=JW0040;gene_synonym=yaaQ;function=putative enzyme%3B Energy metabolism%2C carbon: Electron transport;note=probable flavoprotein subunit%2C carnitine metabolism%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=anaerobic carnitine reduction putative electron transfer flavoprotein subunit;protein_id=AAC73152.2;db_xref=GI:87081682;db_xref=ASAP:ABE-0000145;db_xref=UniProtKB/Swiss-Prot:P60566;db_xref=EcoGene:EG11562 EMBL gene 43188 44129 . + . ID=.90;gene=fixB;locus_tag=b0042;gene_synonym=ECK0043;gene_synonym=JW0041;gene_synonym=yaaR;db_xref=EcoGene:EG11563 EMBL CDS 43188 44129 . + 0 ID=.91;gene=fixB;locus_tag=b0042;gene_synonym=ECK0043;gene_synonym=JW0041;gene_synonym=yaaR;function=putative enzyme%3B Energy metabolism%2C carbon: Electron transport;note=probable flavoprotein subunit%2C carnitine metabolism%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=putative electron transfer flavoprotein%2C NAD/FAD-binding domain and ETFP adenine nucleotide-binding domain-like protein;protein_id=AAC73153.1;db_xref=GI:1786226;db_xref=ASAP:ABE-0000147;db_xref=UniProtKB/Swiss-Prot:P31574;db_xref=EcoGene:EG11563 EMBL gene 44180 45466 . + . ID=.92;gene=fixC;locus_tag=b0043;gene_synonym=ECK0044;gene_synonym=JW0042;gene_synonym=yaaS;db_xref=EcoGene:EG11564 EMBL CDS 44180 45466 . + 0 ID=.93;gene=fixC;locus_tag=b0043;gene_synonym=ECK0044;gene_synonym=JW0042;gene_synonym=yaaS;function=putative carrier%3B Energy metabolism%2C carbon: Electron transport;note=flavoprotein%3B electron transport%3B GO_process: GO:0042413 - carnitine catabolic process;codon_start=1;transl_table=11;product=putative oxidoreductase;protein_id=AAC73154.1;db_xref=GI:1786227;db_xref=ASAP:ABE-0000149;db_xref=UniProtKB/Swiss-Prot:P68644;db_xref=EcoGene:EG11564 EMBL gene 45463 45750 . + . ID=.94;gene=fixX;locus_tag=b0044;gene_synonym=ECK0045;gene_synonym=JW0043;gene_synonym=yaaT;db_xref=EcoGene:EG11565 EMBL CDS 45463 45750 . + 0 ID=.95;gene=fixX;locus_tag=b0044;gene_synonym=ECK0045;gene_synonym=JW0043;gene_synonym=yaaT;function=putative carrier%3B Not classified;note=putative ferredoxin%3B GO_process: GO:0042413 - carnitine catabolic process;codon_start=1;transl_table=11;product=putative 4Fe-4S ferredoxin-type protein;protein_id=AAC73155.1;db_xref=GI:1786228;db_xref=ASAP:ABE-0000151;db_xref=UniProtKB/Swiss-Prot:P68646;db_xref=EcoGene:EG11565 EMBL gene 45807 47138 . + . ID=.96;gene=yaaU;locus_tag=b0045;gene_synonym=ECK0046;gene_synonym=JW0044;gene_synonym=yabE;db_xref=EcoGene:EG11566 EMBL CDS 45807 47138 . + 0 ID=.97;gene=yaaU;locus_tag=b0045;gene_synonym=ECK0046;gene_synonym=JW0044;gene_synonym=yabE;function=putative transport%3B Not classified;note=putative transport protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative MFS sugar transporter%3B membrane protein;protein_id=AAC73156.1;db_xref=GI:1786229;db_xref=ASAP:ABE-0000156;db_xref=UniProtKB/Swiss-Prot:P31679;db_xref=EcoGene:EG11566 EMBL gene 47246 47776 . + . ID=.98;gene=kefF;locus_tag=b0046;gene_synonym=ECK0047;gene_synonym=JW0045;gene_synonym=yabF;db_xref=EcoGene:EG11568 EMBL CDS 47246 47776 . + 0 ID=.99;gene=kefF;locus_tag=b0046;gene_synonym=ECK0047;gene_synonym=JW0045;gene_synonym=yabF;function=putative enzyme%3B Not classified;note=putative NAD(P)H oxidoreductase;codon_start=1;transl_table=11;product=potassium-efflux system ancillary protein for KefC%2C glutathione-regulated%3B quinone oxidoreductase%2C FMN-dependent;protein_id=AAC73157.1;db_xref=GI:1786231;db_xref=ASAP:ABE-0000159;db_xref=UniProtKB/Swiss-Prot:P0A754;db_xref=EcoGene:EG11568 EMBL gene 47769 49631 . + . ID=.100;gene=kefC;locus_tag=b0047;gene_synonym=ECK0048;gene_synonym=JW0046;gene_synonym=trkC;db_xref=EcoGene:EG10521 EMBL CDS 47769 49631 . + 0 ID=.101;gene=kefC;locus_tag=b0047;gene_synonym=ECK0048;gene_synonym=JW0046;gene_synonym=trkC;function=transport%3B Transport of small molecules: Cations;note=K+ efflux antiporter%2C glutathione-regulated%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_function: GO:0015386 - potassium:hydrogen antiporter activity;codon_start=1;transl_table=11;product=potassium:proton antiporter;protein_id=AAC73158.1;db_xref=GI:1786232;db_xref=ASAP:ABE-0000161;db_xref=UniProtKB/Swiss-Prot:P03819;db_xref=EcoGene:EG10521 EMBL gene 49823 50302 . + . ID=.102;gene=folA;locus_tag=b0048;gene_synonym=ECK0049;gene_synonym=JW0047;gene_synonym=tmrA;db_xref=EcoGene:EG10326 EMBL CDS 49823 50302 . + 0 ID=.103;gene=folA;locus_tag=b0048;gene_synonym=ECK0049;gene_synonym=JW0047;gene_synonym=tmrA;ec_number=1.5.1.3;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Folic acid;experiment=N-terminus verified by Edman degradation: PMID 350268%2C4610415;note=dihydrofolate reductase type I%3B trimethoprim resistance%3B GO_process: GO:0046656 - folic acid biosynthetic process;codon_start=1;transl_table=11;product=dihydrofolate reductase;protein_id=AAC73159.1;db_xref=GI:1786233;db_xref=ASAP:ABE-0000164;db_xref=UniProtKB/Swiss-Prot:P0ABQ4;db_xref=EcoGene:EG10326 EMBL repeat_region 50327 50363 . + . ID=.104;note=REP5 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 50380 51222 . - . ID=.105;gene=apaH;locus_tag=b0049;gene_synonym=cfcB;gene_synonym=ECK0050;gene_synonym=JW0048;db_xref=EcoGene:EG10048 EMBL CDS 50380 51222 . - 0 ID=.106;gene=apaH;locus_tag=b0049;gene_synonym=cfcB;gene_synonym=ECK0050;gene_synonym=JW0048;ec_number=3.6.1.41;function=enzyme%3B Salvage of nucleosides and nucleotides;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion;codon_start=1;transl_table=11;product=diadenosine tetraphosphatase;protein_id=AAC73160.1;db_xref=GI:1786234;db_xref=ASAP:ABE-0000167;db_xref=UniProtKB/Swiss-Prot:P05637;db_xref=EcoGene:EG10048 EMBL gene 51229 51606 . - . ID=.107;gene=apaG;locus_tag=b0050;gene_synonym=corD;gene_synonym=ECK0051;gene_synonym=JW0049;gene_synonym=temP;db_xref=EcoGene:EG10047 EMBL CDS 51229 51606 . - 0 ID=.108;gene=apaG;locus_tag=b0050;gene_synonym=corD;gene_synonym=ECK0051;gene_synonym=JW0049;gene_synonym=temP;codon_start=1;transl_table=11;product=protein associated with Co2+ and Mg2+ efflux;protein_id=AAC73161.1;db_xref=GI:1786235;db_xref=ASAP:ABE-0000169;db_xref=UniProtKB/Swiss-Prot:P62672;db_xref=EcoGene:EG10047 EMBL gene 51609 52430 . - . ID=.109;gene=rsmA;locus_tag=b0051;gene_synonym=ECK0052;gene_synonym=JW0050;gene_synonym=ksgA;db_xref=EcoGene:EG10523 EMBL CDS 51609 52430 . - 0 ID=.110;gene=rsmA;locus_tag=b0051;gene_synonym=ECK0052;gene_synonym=JW0050;gene_synonym=ksgA;ec_number=2.1.1.-;function=enzyme%3B rRNA modification%3B drug/analog sensitivity;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009451 - RNA modification%3B GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=16S rRNA m(6)A1518%2C m(6)A1519 dimethyltransferase%2C SAM-dependent;protein_id=AAC73162.1;db_xref=GI:1786236;db_xref=ASAP:ABE-0000175;db_xref=UniProtKB/Swiss-Prot:P06992;db_xref=EcoGene:EG10523 EMBL gene 52427 53416 . - . ID=.111;gene=pdxA;locus_tag=b0052;gene_synonym=ECK0053;gene_synonym=JW0051;db_xref=EcoGene:EG10691 EMBL CDS 52427 53416 . - 0 ID=.112;gene=pdxA;locus_tag=b0052;gene_synonym=ECK0053;gene_synonym=JW0051;ec_number=1.1.1.262;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Pyridoxine;note=pyridoxine biosynthesis%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0008615 - pyridoxine biosynthetic process;codon_start=1;transl_table=11;product=4-hydroxy-L-threonine phosphate dehydrogenase%2C NAD-dependent;protein_id=AAC73163.1;db_xref=GI:1786237;db_xref=ASAP:ABE-0000178;db_xref=UniProtKB/Swiss-Prot:P19624;db_xref=EcoGene:EG10691 EMBL gene 53416 54702 . - . ID=.113;gene=surA;locus_tag=b0053;gene_synonym=ECK0054;gene_synonym=JW0052;db_xref=EcoGene:EG10985 EMBL CDS 53416 54702 . - 0 ID=.114;gene=surA;locus_tag=b0053;gene_synonym=ECK0054;gene_synonym=JW0052;ec_number=5.2.1.8;function=phenotype%3B Not classified;note=survival protein%3B GO_component: GO:0009279 - cell outer membrane%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=peptidyl-prolyl cis-trans isomerase (PPIase);protein_id=AAC73164.1;db_xref=GI:1786238;db_xref=ASAP:ABE-0000180;db_xref=UniProtKB/Swiss-Prot:P0ABZ6;db_xref=EcoGene:EG10985 EMBL gene 54755 57109 . - . ID=.115;gene=lptD;locus_tag=b0054;gene_synonym=ECK0055;gene_synonym=imp;gene_synonym=JW0053;gene_synonym=ostA;gene_synonym=yabG;db_xref=EcoGene:EG11569 EMBL CDS 54755 57109 . - 0 ID=.116;gene=lptD;locus_tag=b0054;gene_synonym=ECK0055;gene_synonym=imp;gene_synonym=JW0053;gene_synonym=ostA;gene_synonym=yabG;function=phenotype%3B Adaptations%2C atypical conditions;note=organic solvent tolerance%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=LPS assembly OM complex LptDE%2C beta-barrel component;protein_id=AAC73165.1;db_xref=GI:1786239;db_xref=ASAP:ABE-0000183;db_xref=UniProtKB/Swiss-Prot:P31554;db_xref=EcoGene:EG11569 EMBL gene 57364 58179 . + . ID=.117;gene=djlA;locus_tag=b0055;gene_synonym=ECK0056;gene_synonym=JW0054;gene_synonym=yabH;db_xref=EcoGene:EG11570 EMBL CDS 57364 58179 . + 0 ID=.118;gene=djlA;locus_tag=b0055;gene_synonym=ECK0056;gene_synonym=JW0054;gene_synonym=yabH;function=factor%3B Chaperones;note=GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=membrane-anchored DnaK co-chaperone%2C DNA-binding protein;protein_id=AAC73166.1;db_xref=GI:1786241;db_xref=ASAP:ABE-0000187;db_xref=UniProtKB/Swiss-Prot:P31680;db_xref=EcoGene:EG11570 EMBL gene 58474 59279 . + . ID=.119;gene=yabP;locus_tag=b4659;gene_synonym=ECK0057;gene_synonym=JW0055;gene_synonym=yabQ;pseudo=true;db_xref=EcoGene:EG12610 EMBL biological_region 58474 59279 . + 0 ID=.120;featflags=type:CDS;gene=yabP;locus_tag=b4659;gene_synonym=ECK0057;gene_synonym=JW0055;gene_synonym=yabQ;note=pseudogene%2C pentapeptide repeats-containing;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0000192;db_xref=ASAP:ABE-0000194;db_xref=UniProtKB/Swiss-Prot:P39220;db_xref=EcoGene:EG12610 EMBL CDS 58474 59052 . + 0 Parent=.120 EMBL CDS 59052 59279 . + 0 Parent=.120 EMBL gene 59687 60346 . - . ID=.123;gene=rluA;locus_tag=b0058;gene_synonym=ECK0059;gene_synonym=JW0057;gene_synonym=yabO;db_xref=EcoGene:EG12609 EMBL CDS 59687 60346 . - 0 ID=.124;gene=rluA;locus_tag=b0058;gene_synonym=ECK0059;gene_synonym=JW0057;gene_synonym=yabO;ec_number=4.2.1.70;function=enzyme%3B rRNA modification%3B tRNA modification;note=GO_process: GO:0009451 - RNA modification;codon_start=1;transl_table=11;product=dual specificity 23S rRNA pseudouridine(746)%2C tRNA pseudouridine(32) synthase%2C SAM-dependent;protein_id=AAC73169.1;db_xref=GI:1786244;db_xref=ASAP:ABE-0000196;db_xref=UniProtKB/Swiss-Prot:P0AA37;db_xref=EcoGene:EG12609 EMBL gene 60358 63264 . - . ID=.125;gene=rapA;locus_tag=b0059;gene_synonym=ECK0060;gene_synonym=hepA;gene_synonym=JW0058;gene_synonym=yabA;db_xref=EcoGene:EG11083 EMBL CDS 60358 63264 . - 0 ID=.126;gene=rapA;locus_tag=b0059;gene_synonym=ECK0060;gene_synonym=hepA;gene_synonym=JW0058;gene_synonym=yabA;ec_number=3.6.1.-;function=putative enzyme%3B RNA synthesis%2C modification%2C DNA transcription;note=probable ATP-dependent RNA helicase%3B GO_process: GO:0009451 - RNA modification;codon_start=1;transl_table=11;product=RNA polymerase remodeling/recycling factor ATPase%3B RNA polymerase-associated%2C ATP-dependent RNA translocase;protein_id=AAC73170.1;db_xref=GI:1786245;db_xref=ASAP:ABE-0000198;db_xref=UniProtKB/Swiss-Prot:P60240;db_xref=EcoGene:EG11083 EMBL gene 63429 65780 . - . ID=.127;gene=polB;locus_tag=b0060;gene_synonym=dinA;gene_synonym=ECK0061;gene_synonym=JW0059;db_xref=EcoGene:EG10747 EMBL CDS 63429 65780 . - 0 ID=.128;gene=polB;locus_tag=b0060;gene_synonym=dinA;gene_synonym=ECK0061;gene_synonym=JW0059;ec_number=2.7.7.7;function=enzyme%3B DNA - replication%2C repair%2C restriction/modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006261 - DNA-dependent DNA replication%3B GO_process: GO:0006281 - DNA repair%3B GO_process: GO:0009314 - response to radiation%3B GO_process: GO:0009432 - SOS response;codon_start=1;transl_table=11;product=DNA polymerase II;protein_id=AAC73171.1;db_xref=GI:1786246;db_xref=ASAP:ABE-0000202;db_xref=UniProtKB/Swiss-Prot:P21189;db_xref=EcoGene:EG10747 EMBL gene 65855 66550 . - . ID=.129;gene=araD;locus_tag=b0061;gene_synonym=ECK0062;gene_synonym=JW0060;db_xref=EcoGene:EG10055 EMBL CDS 65855 66550 . - 0 ID=.130;gene=araD;locus_tag=b0061;gene_synonym=ECK0062;gene_synonym=JW0060;ec_number=5.1.3.4;function=enzyme%3B Degradation of small molecules: Carbon compounds;experiment=N-terminus verified by Edman degradation: PMID 3549454%2C8520491;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=L-ribulose-5-phosphate 4-epimerase;protein_id=AAC73172.1;db_xref=GI:1786247;db_xref=ASAP:ABE-0000209;db_xref=UniProtKB/Swiss-Prot:P08203;db_xref=EcoGene:EG10055 EMBL repeat_region 66565 66812 . + . ID=.131;note=REP6 (repetitive extragenic palindromic) element%3B contains 6 REP sequences EMBL gene 66835 68337 . - . ID=.132;gene=araA;locus_tag=b0062;gene_synonym=ECK0063;gene_synonym=JW0061;db_xref=EcoGene:EG10052 EMBL CDS 66835 68337 . - 0 ID=.133;gene=araA;locus_tag=b0062;gene_synonym=ECK0063;gene_synonym=JW0061;ec_number=5.3.1.4;function=enzyme%3B Degradation of small molecules: Carbon compounds;experiment=N-terminus verified by Edman degradation: PMID 3549454;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=L-arabinose isomerase;protein_id=AAC73173.1;db_xref=GI:1786248;db_xref=ASAP:ABE-0000221;db_xref=UniProtKB/Swiss-Prot:P08202;db_xref=EcoGene:EG10052 EMBL gene 68348 70048 . - . ID=.134;gene=araB;locus_tag=b0063;gene_synonym=ECK0064;gene_synonym=JW0062;db_xref=EcoGene:EG10053 EMBL CDS 68348 70048 . - 0 ID=.135;gene=araB;locus_tag=b0063;gene_synonym=ECK0064;gene_synonym=JW0062;ec_number=2.7.1.16;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=L-ribulokinase;protein_id=AAC73174.1;db_xref=GI:1786249;db_xref=ASAP:ABE-0000223;db_xref=UniProtKB/Swiss-Prot:P08204;db_xref=EcoGene:EG10053 EMBL gene 70387 71265 . + . ID=.136;gene=araC;locus_tag=b0064;gene_synonym=ECK0065;gene_synonym=JW0063;db_xref=EcoGene:EG10054 EMBL CDS 70387 71265 . + 0 ID=.137;gene=araC;locus_tag=b0064;gene_synonym=ECK0065;gene_synonym=JW0063;function=regulator%3B Degradation of small molecules: Carbon compounds;note=transcriptional regulator for ara operon%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=ara regulon transcriptional activator%3B autorepressor;protein_id=AAC73175.1;db_xref=GI:1786251;db_xref=ASAP:ABE-0000236;db_xref=UniProtKB/Swiss-Prot:P0A9E0;db_xref=EcoGene:EG10054 EMBL gene 71351 72115 . + . ID=.138;gene=yabI;locus_tag=b0065;gene_synonym=ECK0066;gene_synonym=JW5005;db_xref=EcoGene:EG11571 EMBL CDS 71351 72115 . + 0 ID=.139;gene=yabI;locus_tag=b0065;gene_synonym=ECK0066;gene_synonym=JW5005;note=GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=DedA family inner membrane protein;protein_id=AAC73176.1;db_xref=GI:1786252;db_xref=ASAP:ABE-0000241;db_xref=UniProtKB/Swiss-Prot:P30149;db_xref=EcoGene:EG11571 EMBL repeat_region 72136 72220 . + . ID=.140;note=REP7 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 72229 72927 . - . ID=.141;gene=thiQ;locus_tag=b0066;gene_synonym=ECK0067;gene_synonym=JW0065;gene_synonym=sfuC;gene_synonym=yabJ;db_xref=EcoGene:EG11572 EMBL CDS 72229 72927 . - 0 ID=.142;gene=thiQ;locus_tag=b0066;gene_synonym=ECK0067;gene_synonym=JW0065;gene_synonym=sfuC;gene_synonym=yabJ;function=transport%3B Transport of small molecules: Other;note=putative ATP-binding component of a transport system%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009228 - thiamin biosynthetic process;codon_start=1;transl_table=11;product=thiamine/thiamine pyrophosphate ABC transporter ATPase;protein_id=AAC73177.1;db_xref=GI:1786253;db_xref=ASAP:ABE-0000244;db_xref=UniProtKB/Swiss-Prot:P31548;db_xref=EcoGene:EG11572 EMBL gene 72911 74521 . - . ID=.143;gene=thiP;locus_tag=b0067;gene_synonym=ECK0068;gene_synonym=JW0066;gene_synonym=sfuB;gene_synonym=yabK;db_xref=EcoGene:EG11573 EMBL CDS 72911 74521 . - 0 ID=.144;gene=thiP;locus_tag=b0067;gene_synonym=ECK0068;gene_synonym=JW0066;gene_synonym=sfuB;gene_synonym=yabK;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009228 - thiamin biosynthetic process;codon_start=1;transl_table=11;product=thiamine/thiamine pyrophosphate ABC transporter permease;protein_id=AAC73178.1;db_xref=GI:1786254;db_xref=ASAP:ABE-0000246;db_xref=UniProtKB/Swiss-Prot:P31549;db_xref=EcoGene:EG11573 EMBL gene 74497 75480 . - . ID=.145;gene=thiB;locus_tag=b0068;gene_synonym=ECK0069;gene_synonym=JW0067;gene_synonym=sfuA;gene_synonym=tbpA;gene_synonym=yabL;db_xref=EcoGene:EG11574 EMBL CDS 74497 75480 . - 0 ID=.146;gene=thiB;locus_tag=b0068;gene_synonym=ECK0069;gene_synonym=JW0067;gene_synonym=sfuA;gene_synonym=tbpA;gene_synonym=yabL;function=transport%3B Transport of small molecules: Other;note=thiamin-binding periplasmic protein%3B periplasmic-binding component of ABC superfamily%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0009228 - thiamin biosynthetic process;codon_start=1;transl_table=11;product=thiamine/thiamine pyrophosphate/thiamine monophosphate ABC transporter periplasmic binding protein;protein_id=AAC73179.1;db_xref=GI:1786255;db_xref=ASAP:ABE-0000249;db_xref=UniProtKB/Swiss-Prot:P31550;db_xref=EcoGene:EG11574 EMBL gene 75644 77299 . - . ID=.147;gene=sgrR;locus_tag=b0069;gene_synonym=ECK0070;gene_synonym=JW0068;gene_synonym=yabN;db_xref=EcoGene:EG12094 EMBL CDS 75644 77299 . - 0 ID=.148;gene=sgrR;locus_tag=b0069;gene_synonym=ECK0070;gene_synonym=JW0068;gene_synonym=yabN;function=transport%3B Not classified;note=putative transport protein%3B GO_component: GO:0042597 - periplasmic space;codon_start=1;transl_table=11;product=transcriptional DNA-binding transcriptional activator of sgrS sRNA;protein_id=AAC73180.1;db_xref=GI:1786256;db_xref=ASAP:ABE-0000251;db_xref=UniProtKB/Swiss-Prot:P33595;db_xref=EcoGene:EG12094 EMBL gene 77367 77593 . + . ID=.149;gene=sgrS;locus_tag=b4577;gene_synonym=ECK0071;gene_synonym=JWR0259;gene_synonym=ryaA;db_xref=EcoGene:EG31149 EMBL ncRNA 77367 77593 . + . ID=.150;ncrna_class=antisense_RNA;gene=sgrS;locus_tag=b4577;gene_synonym=ECK0071;gene_synonym=JWR0259;gene_synonym=ryaA;product=sRNA antisense regulator destabilzes ptsG mRNA%2C Hfq-dependent%3B regulated by sgrR;db_xref=ASAP:ABE-0285090;db_xref=EcoGene:EG31149 EMBL gene 77388 77519 . + . ID=.151;gene=sgrT;locus_tag=b4662;gene_synonym=ECK4477;db_xref=EcoGene:EG14467 EMBL CDS 77388 77519 . + 0 ID=.152;gene=sgrT;locus_tag=b4662;gene_synonym=ECK4477;codon_start=1;transl_table=11;product=inhibitor of glucose uptake;protein_id=ACO59989.1;db_xref=GI:226510924;db_xref=UniProtKB/Swiss-Prot:C1P5Z7;db_xref=EcoGene:EG14467 EMBL gene 77621 78799 . + . ID=.153;gene=setA;locus_tag=b0070;gene_synonym=ECK0072;gene_synonym=JW0069;gene_synonym=yabM;db_xref=EcoGene:EG11754 EMBL CDS 77621 78799 . + 0 ID=.154;gene=setA;locus_tag=b0070;gene_synonym=ECK0072;gene_synonym=JW0069;gene_synonym=yabM;function=putative transport%3B Not classified;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_function: GO:0015543 - lactose/glucose efflux transporter activity%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=broad specificity sugar efflux system;protein_id=AAT48123.1;db_xref=GI:48994875;db_xref=ASAP:ABE-0000257;db_xref=UniProtKB/Swiss-Prot:P31675;db_xref=EcoGene:EG11754 EMBL gene 78848 79453 . - . ID=.155;gene=leuD;locus_tag=b0071;gene_synonym=ECK0073;gene_synonym=JW0070;db_xref=EcoGene:EG11575 EMBL CDS 78848 79453 . - 0 ID=.156;gene=leuD;locus_tag=b0071;gene_synonym=ECK0073;gene_synonym=JW0070;ec_number=4.2.1.33;function=enzyme%3B Amino acid biosynthesis: Leucine;note=isopropylmalate isomerase subunit%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009098 - leucine biosynthetic process;codon_start=1;transl_table=11;product=3-isopropylmalate dehydratase small subunit;protein_id=AAC73182.1;db_xref=GI:1786258;db_xref=ASAP:ABE-0000259;db_xref=UniProtKB/Swiss-Prot:P30126;db_xref=EcoGene:EG11575 EMBL gene 79464 80864 . - . ID=.157;gene=leuC;locus_tag=b0072;gene_synonym=ECK0074;gene_synonym=JW0071;db_xref=EcoGene:EG11576 EMBL CDS 79464 80864 . - 0 ID=.158;gene=leuC;locus_tag=b0072;gene_synonym=ECK0074;gene_synonym=JW0071;ec_number=4.2.1.33;function=enzyme%3B Amino acid biosynthesis: Leucine;note=3-isopropylmalate isomerase (dehydratase) subunit%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009098 - leucine biosynthetic process;codon_start=1;transl_table=11;product=3-isopropylmalate dehydratase large subunit;protein_id=AAC73183.1;db_xref=GI:1786259;db_xref=ASAP:ABE-0000261;db_xref=UniProtKB/Swiss-Prot:P0A6A6;db_xref=EcoGene:EG11576 EMBL gene 80867 81958 . - . ID=.159;gene=leuB;locus_tag=b0073;gene_synonym=ECK0075;gene_synonym=JW5807;db_xref=EcoGene:EG11577 EMBL CDS 80867 81958 . - 0 ID=.160;gene=leuB;locus_tag=b0073;gene_synonym=ECK0075;gene_synonym=JW5807;ec_number=1.1.1.85;function=enzyme%3B Amino acid biosynthesis: Leucine;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009098 - leucine biosynthetic process;codon_start=1;transl_table=11;product=3-isopropylmalate dehydrogenase%2C NAD(+)-dependent;protein_id=AAC73184.2;db_xref=GI:87081683;db_xref=ASAP:ABE-0000265;db_xref=UniProtKB/Swiss-Prot:P30125;db_xref=EcoGene:EG11577 EMBL gene 81958 83529 . - . ID=.161;gene=leuA;locus_tag=b0074;gene_synonym=ECK0076;gene_synonym=JW0073;db_xref=EcoGene:EG11226 EMBL CDS 81958 83529 . - 0 ID=.162;gene=leuA;locus_tag=b0074;gene_synonym=ECK0076;gene_synonym=JW0073;ec_number=2.3.3.13;function=enzyme%3B Amino acid biosynthesis: Leucine;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009098 - leucine biosynthetic process;codon_start=1;transl_table=11;product=2-isopropylmalate synthase;protein_id=AAC73185.1;db_xref=GI:1786261;db_xref=ASAP:ABE-0000267;db_xref=UniProtKB/Swiss-Prot:P09151;db_xref=EcoGene:EG11226 EMBL gene 83622 83708 . - . ID=.163;gene=leuL;locus_tag=b0075;gene_synonym=ECK0077;gene_synonym=JW0074;gene_synonym=leuLP;db_xref=EcoGene:EG11280 EMBL CDS 83622 83708 . - 0 ID=.164;gene=leuL;locus_tag=b0075;gene_synonym=ECK0077;gene_synonym=JW0074;gene_synonym=leuLP;function=leader%3B Amino acid biosynthesis: Leucine;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009098 - leucine biosynthetic process;codon_start=1;transl_table=11;product=leu operon leader peptide;protein_id=AAC73186.1;db_xref=GI:1786263;db_xref=ASAP:ABE-0000269;db_xref=UniProtKB/Swiss-Prot:P0AD79;db_xref=EcoGene:EG11280 EMBL gene 84368 85312 . + . ID=.165;gene=leuO;locus_tag=b0076;gene_synonym=ECK0078;gene_synonym=JW0075;db_xref=EcoGene:EG10531 EMBL CDS 84368 85312 . + 0 ID=.166;gene=leuO;locus_tag=b0076;gene_synonym=ECK0078;gene_synonym=JW0075;function=putative regulator%3B Amino acid biosynthesis: Leucine;note=probable transcriptional activator for leuABCD operon%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0009098 - leucine biosynthetic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=global transcription factor;protein_id=AAC73187.2;db_xref=GI:87081684;db_xref=ASAP:ABE-0000280;db_xref=UniProtKB/Swiss-Prot:P10151;db_xref=EcoGene:EG10531 EMBL gene 85630 87354 . + . ID=.167;gene=ilvI;locus_tag=b0077;gene_synonym=ECK0079;gene_synonym=JW0076;db_xref=EcoGene:EG10500 EMBL CDS 85630 87354 . + 0 ID=.168;gene=ilvI;locus_tag=b0077;gene_synonym=ECK0079;gene_synonym=JW0076;ec_number=2.2.1.6;function=enzyme%3B Amino acid biosynthesis: Isoleucine%2C Valine;experiment=N-terminus verified by Edman degradation: PMID 3881131%2C9298646;note=acetolactate synthase III%2C valine sensitive%2C large subunit;codon_start=1;transl_table=11;product=acetolactate synthase 3 large subunit;protein_id=AAC73188.2;db_xref=GI:87081685;db_xref=ASAP:ABE-0000290;db_xref=UniProtKB/Swiss-Prot:P00893;db_xref=EcoGene:EG10500 EMBL gene 87357 87848 . + . ID=.169;gene=ilvH;locus_tag=b0078;gene_synonym=brnP;gene_synonym=ECK0080;gene_synonym=JW0077;db_xref=EcoGene:EG10499 EMBL CDS 87357 87848 . + 0 ID=.170;gene=ilvH;locus_tag=b0078;gene_synonym=brnP;gene_synonym=ECK0080;gene_synonym=JW0077;ec_number=2.2.1.6;function=enzyme%3B Amino acid biosynthesis: Isoleucine%2C Valine;note=acetolactate synthase III%2C valine sensitive%2C small subunit;codon_start=1;transl_table=11;product=acetolactate synthase 3%2C small subunit%2C valine-sensitive;protein_id=AAC73189.1;db_xref=GI:1786266;db_xref=ASAP:ABE-0000294;db_xref=UniProtKB/Swiss-Prot:P00894;db_xref=EcoGene:EG10499 EMBL gene 88028 89032 . + . ID=.171;gene=cra;locus_tag=b0080;gene_synonym=ECK0081;gene_synonym=fruC;gene_synonym=fruR;gene_synonym=fruS?;gene_synonym=JW0078;gene_synonym=serR?;gene_synonym=shl;db_xref=EcoGene:EG10338 EMBL CDS 88028 89032 . + 0 ID=.172;gene=cra;locus_tag=b0080;gene_synonym=ECK0081;gene_synonym=fruC;gene_synonym=fruR;gene_synonym=fruS?;gene_synonym=JW0078;gene_synonym=serR?;gene_synonym=shl;function=regulator%3B Energy metabolism%2C carbon: Glycolysis;note=transcriptional repressor of fru operon and others%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006096 - glycolysis%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=transcriptional repressor-activator for carbon metabolism;protein_id=AAC73191.1;db_xref=GI:1786268;db_xref=ASAP:ABE-0000299;db_xref=UniProtKB/Swiss-Prot:P0ACP1;db_xref=EcoGene:EG10338 EMBL gene 89634 90092 . + . ID=.173;gene=mraZ;locus_tag=b0081;gene_synonym=ECK0082;gene_synonym=JW0079;gene_synonym=yabB;db_xref=EcoGene:EG11084 EMBL CDS 89634 90092 . + 0 ID=.174;gene=mraZ;locus_tag=b0081;gene_synonym=ECK0082;gene_synonym=JW0079;gene_synonym=yabB;codon_start=1;transl_table=11;product=RsmH methytransferase inhibitor;protein_id=AAC73192.1;db_xref=GI:1786269;db_xref=ASAP:ABE-0000302;db_xref=UniProtKB/Swiss-Prot:P22186;db_xref=EcoGene:EG11084 EMBL gene 90094 91035 . + . ID=.175;gene=rsmH;locus_tag=b0082;gene_synonym=ECK0083;gene_synonym=JW0080;gene_synonym=mraW;gene_synonym=yabC;db_xref=EcoGene:EG11085 EMBL CDS 90094 91035 . + 0 ID=.176;gene=rsmH;locus_tag=b0082;gene_synonym=ECK0083;gene_synonym=JW0080;gene_synonym=mraW;gene_synonym=yabC;ec_number=2.1.1.-;function=enzyme%3B rRNA modification;experiment=N-terminus verified by Edman degradation: PMID 10572301;note=putative apolipoprotein%3B GO_process: GO:0042158 - lipoprotein biosynthetic process;codon_start=1;transl_table=11;product=16S rRNA m(4)C1402 methyltransferase%2C SAM-dependent;protein_id=AAC73193.1;db_xref=GI:1786270;db_xref=ASAP:ABE-0000304;db_xref=UniProtKB/Swiss-Prot:P60390;db_xref=EcoGene:EG11085 EMBL gene 91032 91397 . + . ID=.177;gene=ftsL;locus_tag=b0083;gene_synonym=ECK0084;gene_synonym=JW0081;gene_synonym=mraR;gene_synonym=yabD;db_xref=EcoGene:EG11086 EMBL CDS 91032 91397 . + 0 ID=.178;gene=ftsL;locus_tag=b0083;gene_synonym=ECK0084;gene_synonym=JW0081;gene_synonym=mraR;gene_synonym=yabD;function=phenotype%3B Cell division;note=cell division protein%3B ingrowth of wall at septum;codon_start=1;transl_table=11;product=membrane bound cell division leucine zipper septum protein;protein_id=AAC73194.1;db_xref=GI:1786271;db_xref=ASAP:ABE-0000306;db_xref=UniProtKB/Swiss-Prot:P0AEN4;db_xref=EcoGene:EG11086 EMBL gene 91413 93179 . + . ID=.179;gene=ftsI;locus_tag=b0084;gene_synonym=ECK0085;gene_synonym=JW0082;gene_synonym=pbpB;gene_synonym=sep;db_xref=EcoGene:EG10341 EMBL CDS 91413 93179 . + 0 ID=.180;gene=ftsI;locus_tag=b0084;gene_synonym=ECK0085;gene_synonym=JW0082;gene_synonym=pbpB;gene_synonym=sep;function=enzyme%3B Cell division;note=septum formation%3B penicillin-binding protein 3%3B peptidoglycan synthetase%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009252 - peptidoglycan biosynthetic process%3B GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=transpeptidase involved in septal peptidoglycan synthesis%3B penicillin-binding protein 3;protein_id=AAC73195.1;db_xref=GI:1786272;db_xref=ASAP:ABE-0000309;db_xref=UniProtKB/Swiss-Prot:P0AD68;db_xref=EcoGene:EG10341 EMBL gene 93166 94653 . + . ID=.181;gene=murE;locus_tag=b0085;gene_synonym=ECK0086;gene_synonym=JW0083;db_xref=EcoGene:EG10621 EMBL CDS 93166 94653 . + 0 ID=.182;gene=murE;locus_tag=b0085;gene_synonym=ECK0086;gene_synonym=JW0083;ec_number=6.3.2.13;function=enzyme%3B Murein sacculus%2C peptidoglycan;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_process: GO:0009252 - peptidoglycan biosynthetic process;codon_start=1;transl_table=11;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate:meso- diaminopimelate ligase;protein_id=AAC73196.1;db_xref=GI:1786273;db_xref=ASAP:ABE-0000311;db_xref=UniProtKB/Swiss-Prot:P22188;db_xref=EcoGene:EG10621 EMBL gene 94650 96008 . + . ID=.183;gene=murF;locus_tag=b0086;gene_synonym=ECK0087;gene_synonym=JW0084;gene_synonym=mra;db_xref=EcoGene:EG10622 EMBL CDS 94650 96008 . + 0 ID=.184;gene=murF;locus_tag=b0086;gene_synonym=ECK0087;gene_synonym=JW0084;gene_synonym=mra;ec_number=6.3.2.10;function=enzyme%3B Murein sacculus%2C peptidoglycan;experiment=N-terminus verified by Edman degradation: PMID 2186811;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009252 - peptidoglycan biosynthetic process%3B GO_process: GO:0000270 - peptidoglycan metabolic process;codon_start=1;transl_table=11;product=UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D- alanine ligase;protein_id=AAC73197.1;db_xref=GI:1786274;db_xref=ASAP:ABE-0000313;db_xref=UniProtKB/Swiss-Prot:P11880;db_xref=EcoGene:EG10622 EMBL gene 96002 97084 . + . ID=.185;gene=mraY;locus_tag=b0087;gene_synonym=ECK0088;gene_synonym=JW0085;gene_synonym=murX;db_xref=EcoGene:EG10604 EMBL CDS 96002 97084 . + 0 ID=.186;gene=mraY;locus_tag=b0087;gene_synonym=ECK0088;gene_synonym=JW0085;gene_synonym=murX;ec_number=2.7.8.13;function=enzyme%3B Murein sacculus%2C peptidoglycan;note=phospho-N-acetylmuramoyl-pentapeptide transferase?%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009252 - peptidoglycan biosynthetic process;codon_start=1;transl_table=11;product=phospho-N-acetylmuramoyl-pentapeptide transferase;protein_id=AAC73198.1;db_xref=GI:1786275;db_xref=ASAP:ABE-0000316;db_xref=UniProtKB/Swiss-Prot:P0A6W3;db_xref=EcoGene:EG10604 EMBL gene 97087 98403 . + . ID=.187;gene=murD;locus_tag=b0088;gene_synonym=ECK0089;gene_synonym=JW0086;db_xref=EcoGene:EG10620 EMBL CDS 97087 98403 . + 0 ID=.188;gene=murD;locus_tag=b0088;gene_synonym=ECK0089;gene_synonym=JW0086;ec_number=6.3.2.9;function=enzyme%3B Murein sacculus%2C peptidoglycan;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009252 - peptidoglycan biosynthetic process;codon_start=1;transl_table=11;product=UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;protein_id=AAC73199.1;db_xref=GI:1786276;db_xref=ASAP:ABE-0000318;db_xref=UniProtKB/Swiss-Prot:P14900;db_xref=EcoGene:EG10620 EMBL gene 98403 99647 . + . ID=.189;gene=ftsW;locus_tag=b0089;gene_synonym=ECK0090;gene_synonym=JW0087;db_xref=EcoGene:EG10344 EMBL CDS 98403 99647 . + 0 ID=.190;gene=ftsW;locus_tag=b0089;gene_synonym=ECK0090;gene_synonym=JW0087;function=membrane%3B Cell division;note=cell division%3B membrane protein involved in shape determination%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative lipid II flippase%3B integral membrane protein%3B FtsZ ring stabilizer;protein_id=AAC73200.1;db_xref=GI:1786277;db_xref=ASAP:ABE-0000320;db_xref=UniProtKB/Swiss-Prot:P0ABG4;db_xref=EcoGene:EG10344 EMBL gene 99644 100711 . + . ID=.191;gene=murG;locus_tag=b0090;gene_synonym=ECK0091;gene_synonym=JW0088;db_xref=EcoGene:EG10623 EMBL CDS 99644 100711 . + 0 ID=.192;gene=murG;locus_tag=b0090;gene_synonym=ECK0091;gene_synonym=JW0088;ec_number=2.4.1.227;function=enzyme%3B Murein sacculus%2C peptidoglycan;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009252 - peptidoglycan biosynthetic process;codon_start=1;transl_table=11;product=N-acetylglucosaminyl transferase;protein_id=AAC73201.1;db_xref=GI:1786278;db_xref=ASAP:ABE-0000322;db_xref=UniProtKB/Swiss-Prot:P17443;db_xref=EcoGene:EG10623 EMBL gene 100765 102240 . + . ID=.193;gene=murC;locus_tag=b0091;gene_synonym=ECK0092;gene_synonym=JW0089;db_xref=EcoGene:EG10619 EMBL CDS 100765 102240 . + 0 ID=.194;gene=murC;locus_tag=b0091;gene_synonym=ECK0092;gene_synonym=JW0089;ec_number=6.3.2.8;function=enzyme%3B Murein sacculus%2C peptidoglycan;experiment=N-terminus verified by Edman degradation: PMID 7601127;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_process: GO:0009252 - peptidoglycan biosynthetic process;codon_start=1;transl_table=11;product=UDP-N-acetylmuramate:L-alanine ligase;protein_id=AAC73202.1;db_xref=GI:1786279;db_xref=ASAP:ABE-0000324;db_xref=UniProtKB/Swiss-Prot:P17952;db_xref=EcoGene:EG10619 EMBL gene 102233 103153 . + . ID=.195;gene=ddlB;locus_tag=b0092;gene_synonym=ddl;gene_synonym=ECK0093;gene_synonym=JW0090;db_xref=EcoGene:EG10214 EMBL CDS 102233 103153 . + 0 ID=.196;gene=ddlB;locus_tag=b0092;gene_synonym=ddl;gene_synonym=ECK0093;gene_synonym=JW0090;ec_number=6.3.2.4;function=enzyme%3B Murein sacculus%2C peptidoglycan;note=D-alanine-D-alanine ligase B%2C affects cell division%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009252 - peptidoglycan biosynthetic process;codon_start=1;transl_table=11;product=D-alanine:D-alanine ligase;protein_id=AAC73203.1;db_xref=GI:1786280;db_xref=ASAP:ABE-0000326;db_xref=UniProtKB/Swiss-Prot:P07862;db_xref=EcoGene:EG10214 EMBL gene 103155 103985 . + . ID=.197;gene=ftsQ;locus_tag=b0093;gene_synonym=ECK0094;gene_synonym=JW0091;db_xref=EcoGene:EG10342 EMBL CDS 103155 103985 . + 0 ID=.198;gene=ftsQ;locus_tag=b0093;gene_synonym=ECK0094;gene_synonym=JW0091;function=phenotype%3B Cell division;note=cell division protein%3B ingrowth of wall at septum%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=divisome assembly protein%2C membrane anchored protein involved in growth of wall at septum;protein_id=AAC73204.1;db_xref=GI:1786281;db_xref=ASAP:ABE-0000329;db_xref=UniProtKB/Swiss-Prot:P06136;db_xref=EcoGene:EG10342 EMBL gene 103982 105244 . + . ID=.199;gene=ftsA;locus_tag=b0094;gene_synonym=divA;gene_synonym=ECK0095;gene_synonym=JW0092;db_xref=EcoGene:EG10339 EMBL CDS 103982 105244 . + 0 ID=.200;gene=ftsA;locus_tag=b0094;gene_synonym=divA;gene_synonym=ECK0095;gene_synonym=JW0092;function=phenotype%3B Cell division;note=ATP-binding cell division protein%2C septation process%2C complexes with FtsZ%2C associated with junctions of inner and outer membranes%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=ATP-binding cell division FtsK recruitment protein;protein_id=AAC73205.1;db_xref=GI:1786282;db_xref=ASAP:ABE-0000331;db_xref=UniProtKB/Swiss-Prot:P0ABH0;db_xref=EcoGene:EG10339 EMBL gene 105305 106456 . + . ID=.201;gene=ftsZ;locus_tag=b0095;gene_synonym=ECK0096;gene_synonym=JW0093;gene_synonym=sfiB;gene_synonym=sulB;db_xref=EcoGene:EG10347 EMBL CDS 105305 106456 . + 0 ID=.202;gene=ftsZ;locus_tag=b0095;gene_synonym=ECK0096;gene_synonym=JW0093;gene_synonym=sfiB;gene_synonym=sulB;function=enzyme%3B Cell division;experiment=N-terminus verified by Edman degradation: PMID 9298646;note=cell division%3B forms circumferential ring%3B tubulin-like GTP-binding protein and GTPase%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=GTP-binding tubulin-like cell division protein;protein_id=AAC73206.1;db_xref=GI:1786284;db_xref=ASAP:ABE-0000333;db_xref=UniProtKB/Swiss-Prot:P0A9A6;db_xref=EcoGene:EG10347 EMBL gene 106557 107474 . + . ID=.203;gene=lpxC;locus_tag=b0096;gene_synonym=asmB;gene_synonym=ECK0097;gene_synonym=envA;gene_synonym=JW0094;db_xref=EcoGene:EG10265 EMBL CDS 106557 107474 . + 0 ID=.204;gene=lpxC;locus_tag=b0096;gene_synonym=asmB;gene_synonym=ECK0097;gene_synonym=envA;gene_synonym=JW0094;ec_number=3.5.1.-;function=enzyme%3B Surface polysaccharides %26 antigens;experiment=N-terminus verified by Edman degradation: PMID 8530464;note=UDP-3-O-acyl N-acetylglucosamine deacetylase%3B lipid A biosynthesis%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0009245 - lipid A biosynthetic process;codon_start=1;transl_table=11;product=UDP-3-O-acyl N-acetylglucosamine deacetylase;protein_id=AAC73207.1;db_xref=GI:1786285;db_xref=ASAP:ABE-0000336;db_xref=UniProtKB/Swiss-Prot:P0A725;db_xref=EcoGene:EG10265 EMBL gene 107705 108217 . + . ID=.205;gene=secM;locus_tag=b0097;gene_synonym=ECK0098;gene_synonym=JW5007;gene_synonym=srrA;gene_synonym=yacA;db_xref=EcoGene:EG11087 EMBL CDS 107705 108217 . + 0 ID=.206;gene=secM;locus_tag=b0097;gene_synonym=ECK0098;gene_synonym=JW5007;gene_synonym=srrA;gene_synonym=yacA;codon_start=1;transl_table=11;product=regulator of secA translation;protein_id=AAC73208.2;db_xref=GI:87081686;db_xref=ASAP:ABE-0000340;db_xref=UniProtKB/Swiss-Prot:P62395;db_xref=EcoGene:EG11087 EMBL gene 108279 110984 . + . ID=.207;gene=secA;locus_tag=b0098;gene_synonym=azi;gene_synonym=ECK0099;gene_synonym=JW0096;gene_synonym=pea;gene_synonym=prlD;db_xref=EcoGene:EG10936 EMBL CDS 108279 110984 . + 0 ID=.208;gene=secA;locus_tag=b0098;gene_synonym=azi;gene_synonym=ECK0099;gene_synonym=JW0096;gene_synonym=pea;gene_synonym=prlD;function=transport%3B Protein%2C peptide secretion;experiment=N-terminus verified by Edman degradation: PMID 2841285;note=preprotein translocase%3B secretion protein%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=preprotein translocase subunit%2C ATPase;protein_id=AAC73209.1;db_xref=GI:1786287;db_xref=ASAP:ABE-0000343;db_xref=UniProtKB/Swiss-Prot:P10408;db_xref=EcoGene:EG10936 EMBL gene 111044 111433 . + . ID=.209;gene=mutT;locus_tag=b0099;gene_synonym=ECK0100;gene_synonym=JW0097;gene_synonym=nudA;db_xref=EcoGene:EG10626 EMBL CDS 111044 111433 . + 0 ID=.210;gene=mutT;locus_tag=b0099;gene_synonym=ECK0100;gene_synonym=JW0097;gene_synonym=nudA;ec_number=3.6.1.-;function=enzyme%3B 2'-Deoxyribonucleotide metabolism;experiment=N-terminus verified by Edman degradation: PMID 3288626;note=7%2C8-dihydro-8-oxoguanine-triphosphatase%2C prefers dGTP%2C causes AT-GC transversions%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=dGTP-preferring nucleoside triphosphate pyrophosphohydrolase;protein_id=AAC73210.1;db_xref=GI:1786288;db_xref=ASAP:ABE-0000346;db_xref=UniProtKB/Swiss-Prot:P08337;db_xref=EcoGene:EG10626 EMBL repeat_region 111430 111629 . + . ID=.211;note=RIP8 (repetitive extragenic palindromic) element%3B contains 4 REP sequences and 1 IHF site EMBL gene 111649 111846 . - . ID=.212;gene=yacG;locus_tag=b0101;gene_synonym=ECK0101;gene_synonym=JW5008;db_xref=EcoGene:EG12314 EMBL CDS 111649 111846 . - 0 ID=.213;gene=yacG;locus_tag=b0101;gene_synonym=ECK0101;gene_synonym=JW5008;codon_start=1;transl_table=11;product=DNA gyrase inhibitor;protein_id=AAC73212.1;db_xref=GI:1786290;db_xref=ASAP:ABE-0000351;db_xref=UniProtKB/Swiss-Prot:P0A8H8;db_xref=EcoGene:EG12314 EMBL gene 111856 112599 . - . ID=.214;gene=zapD;locus_tag=b0102;gene_synonym=ECK0102;gene_synonym=JW0099;gene_synonym=yacF;db_xref=EcoGene:EG12313 EMBL CDS 111856 112599 . - 0 ID=.215;gene=zapD;locus_tag=b0102;gene_synonym=ECK0102;gene_synonym=JW0099;gene_synonym=yacF;codon_start=1;transl_table=11;product=FtsZ stabilizer;protein_id=AAC73213.1;db_xref=GI:1786291;db_xref=ASAP:ABE-0000355;db_xref=UniProtKB/Swiss-Prot:P36680;db_xref=EcoGene:EG12313 EMBL gene 112599 113219 . - . ID=.216;gene=coaE;locus_tag=b0103;gene_synonym=ECK0103;gene_synonym=JW0100;gene_synonym=yacE;db_xref=EcoGene:EG12312 EMBL CDS 112599 113219 . - 0 ID=.217;gene=coaE;locus_tag=b0103;gene_synonym=ECK0103;gene_synonym=JW0100;gene_synonym=yacE;ec_number=2.7.1.24;function=orf%3B Not classified;note=putative DNA repair protein;codon_start=1;transl_table=11;product=dephospho-CoA kinase;protein_id=AAC73214.1;db_xref=GI:1786292;db_xref=ASAP:ABE-0000357;db_xref=UniProtKB/Swiss-Prot:P0A6I9;db_xref=EcoGene:EG12312 EMBL gene 113444 114487 . + . ID=.218;gene=guaC;locus_tag=b0104;gene_synonym=ECK0104;gene_synonym=JW0101;db_xref=EcoGene:EG10422 EMBL CDS 113444 114487 . + 0 ID=.219;gene=guaC;locus_tag=b0104;gene_synonym=ECK0104;gene_synonym=JW0101;ec_number=1.7.1.7;function=enzyme%3B Purine ribonucleotide biosynthesis;experiment=N-terminus verified by Edman degradation: PMID 9298646;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009152 - purine ribonucleotide biosynthetic process%3B GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion;codon_start=1;transl_table=11;product=GMP reductase;protein_id=AAC73215.1;db_xref=GI:1786293;db_xref=ASAP:ABE-0000362;db_xref=UniProtKB/Swiss-Prot:P60560;db_xref=EcoGene:EG10422 EMBL gene 114522 115724 . - . ID=.220;gene=hofC;locus_tag=b0106;gene_synonym=ECK0105;gene_synonym=hopC;gene_synonym=JW0102;gene_synonym=yacD;db_xref=EcoGene:EG11798 EMBL CDS 114522 115724 . - 0 ID=.221;gene=hofC;locus_tag=b0106;gene_synonym=ECK0105;gene_synonym=hopC;gene_synonym=JW0102;gene_synonym=yacD;function=putative transport%3B Not classified;note=putative integral membrane protein involved in biogenesis of fimbriae%2C protein transport%2C DNA uptake%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=assembly protein in type IV pilin biogenesis%2C transmembrane protein;protein_id=AAC73217.1;db_xref=GI:1786295;db_xref=ASAP:ABE-0000366;db_xref=UniProtKB/Swiss-Prot:P36646;db_xref=EcoGene:EG11798 EMBL gene 115714 117099 . - . ID=.222;gene=hofB;locus_tag=b0107;gene_synonym=ECK0106;gene_synonym=hopB;gene_synonym=JW0103;db_xref=EcoGene:EG12106 EMBL CDS 115714 117099 . - 0 ID=.223;gene=hofB;locus_tag=b0107;gene_synonym=ECK0106;gene_synonym=hopB;gene_synonym=JW0103;function=putative transport%3B Not classified;note=putative integral membrane protein involved in biogenesis of fimbriae%2C protein transport%2C DNA uptake%3B GO_component: GO:0009289 - pilus;codon_start=1;transl_table=11;product=T2SE secretion family protein%3B P-loop ATPase superfamily protein;protein_id=AAC73218.1;db_xref=GI:1786296;db_xref=ASAP:ABE-0000370;db_xref=UniProtKB/Swiss-Prot:P36645;db_xref=EcoGene:EG12106 EMBL gene 117109 117549 . - . ID=.224;gene=ppdD;locus_tag=b0108;gene_synonym=ECK0107;gene_synonym=JW0104;db_xref=EcoGene:EG12107 EMBL CDS 117109 117549 . - 0 ID=.225;gene=ppdD;locus_tag=b0108;gene_synonym=ECK0107;gene_synonym=JW0104;function=putative structural component%3B Surface structures;note=prelipin peptidase dependent protein%3B GO_component: GO:0009289 - pilus;codon_start=1;transl_table=11;product=putative prepilin peptidase-dependent pilin;protein_id=AAC73219.1;db_xref=GI:1786297;db_xref=ASAP:ABE-0000372;db_xref=UniProtKB/Swiss-Prot:P36647;db_xref=EcoGene:EG12107 EMBL gene 117752 118645 . - . ID=.226;gene=nadC;locus_tag=b0109;gene_synonym=ECK0108;gene_synonym=JW0105;db_xref=EcoGene:EG11546 EMBL CDS 117752 118645 . - 0 ID=.227;gene=nadC;locus_tag=b0109;gene_synonym=ECK0108;gene_synonym=JW0105;ec_number=2.4.2.19;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Pyridine nucleotide;note=GO_process: GO:0009435 - NAD biosynthetic process;codon_start=1;transl_table=11;product=quinolinate phosphoribosyltransferase;protein_id=AAC73220.1;db_xref=GI:1786299;db_xref=ASAP:ABE-0000374;db_xref=UniProtKB/Swiss-Prot:P30011;db_xref=EcoGene:EG11546 EMBL gene 118733 119284 . + . ID=.228;gene=ampD;locus_tag=b0110;gene_synonym=ECK0109;gene_synonym=JW0106;db_xref=EcoGene:EG10041 EMBL CDS 118733 119284 . + 0 ID=.229;gene=ampD;locus_tag=b0110;gene_synonym=ECK0109;gene_synonym=JW0106;ec_number=3.5.1.28;function=regulator%3B Not classified;note=regulates ampC%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0000270 - peptidoglycan metabolic process;codon_start=1;transl_table=11;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase%2C Zn-dependent%3B murein amidase;protein_id=AAC73221.1;db_xref=GI:1786300;db_xref=ASAP:ABE-0000380;db_xref=UniProtKB/Swiss-Prot:P13016;db_xref=EcoGene:EG10041 EMBL gene 119281 120135 . + . ID=.230;gene=ampE;locus_tag=b0111;gene_synonym=ECK0110;gene_synonym=JW0107;db_xref=EcoGene:EG10042 EMBL CDS 119281 120135 . + 0 ID=.231;gene=ampE;locus_tag=b0111;gene_synonym=ECK0110;gene_synonym=JW0107;function=regulator%3B Drug/analog sensitivity;note=regulates ampC%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=ampicillin resistance inner membrane protein%3B putative signaling protein in beta-lactamase regulation;protein_id=AAC73222.1;db_xref=GI:1786301;db_xref=ASAP:ABE-0000382;db_xref=UniProtKB/Swiss-Prot:P0AE14;db_xref=EcoGene:EG10042 EMBL gene 120178 121551 . - . ID=.232;gene=aroP;locus_tag=b0112;gene_synonym=ECK0111;gene_synonym=JW0108;db_xref=EcoGene:EG10084 EMBL CDS 120178 121551 . - 0 ID=.233;gene=aroP;locus_tag=b0112;gene_synonym=ECK0111;gene_synonym=JW0108;function=transport%3B Transport of small molecules: Amino acids%2C amines;note=aromatic amino acid transport protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009094 - L-phenylalanine biosynthetic process%3B GO_process: GO:0006571 - tyrosine biosynthetic process;codon_start=1;transl_table=11;product=aromatic amino acid transporter;protein_id=AAC73223.1;db_xref=GI:1786302;db_xref=ASAP:ABE-0000384;db_xref=UniProtKB/Swiss-Prot:P15993;db_xref=EcoGene:EG10084 EMBL gene 122092 122856 . + . ID=.234;gene=pdhR;locus_tag=b0113;gene_synonym=aceC;gene_synonym=ECK0112;gene_synonym=genA;gene_synonym=JW0109;gene_synonym=yacB;db_xref=EcoGene:EG11088 EMBL CDS 122092 122856 . + 0 ID=.235;gene=pdhR;locus_tag=b0113;gene_synonym=aceC;gene_synonym=ECK0112;gene_synonym=genA;gene_synonym=JW0109;gene_synonym=yacB;function=regulator%3B Energy metabolism%2C carbon: Pyruvate dehydrogenase;note=transcriptional regulator for pyruvate dehydrogenase complex%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006096 - glycolysis%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=pyruvate dehydrogenase complex repressor%3B autorepressor;protein_id=AAC73224.1;db_xref=GI:1786303;db_xref=ASAP:ABE-0000394;db_xref=UniProtKB/Swiss-Prot:P0ACL9;db_xref=EcoGene:EG11088 EMBL gene 123017 125680 . + . ID=.236;gene=aceE;locus_tag=b0114;gene_synonym=ECK0113;gene_synonym=JW0110;db_xref=EcoGene:EG10024 EMBL CDS 123017 125680 . + 0 ID=.237;gene=aceE;locus_tag=b0114;gene_synonym=ECK0113;gene_synonym=JW0110;ec_number=1.2.4.1;function=enzyme%3B Energy metabolism%2C carbon: Pyruvate dehydrogenase;note=pyruvate dehydrogenase (decarboxylase component)%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0006086 - acetyl-CoA biosynthetic process from pyruvate%3B GO_process: GO:0006096 - glycolysis%3B GO_process: GO:0009436 - glyoxylate catabolic process%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=pyruvate dehydrogenase%2C decarboxylase component E1%2C thiamine triphosphate-binding;protein_id=AAC73225.1;db_xref=GI:1786304;db_xref=ASAP:ABE-0000397;db_xref=UniProtKB/Swiss-Prot:P0AFG8;db_xref=EcoGene:EG10024 EMBL gene 125695 127587 . + . ID=.238;gene=aceF;locus_tag=b0115;gene_synonym=ECK0114;gene_synonym=JW0111;db_xref=EcoGene:EG10025 EMBL CDS 125695 127587 . + 0 ID=.239;gene=aceF;locus_tag=b0115;gene_synonym=ECK0114;gene_synonym=JW0111;ec_number=2.3.1.12;function=enzyme%3B Energy metabolism%2C carbon: Pyruvate dehydrogenase;note=pyruvate dehydrogenase (dihydrolipoyltransacetylase component)%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0006086 - acetyl-CoA biosynthetic process from pyruvate%3B GO_process: GO:0006096 - glycolysis%3B GO_process: GO:0009436 - glyoxylate catabolic process%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=pyruvate dehydrogenase%2C dihydrolipoyltransacetylase component E2;protein_id=AAC73226.1;db_xref=GI:1786305;db_xref=ASAP:ABE-0000400;db_xref=UniProtKB/Swiss-Prot:P06959;db_xref=EcoGene:EG10025 EMBL gene 127912 129336 . + . ID=.240;gene=lpd;locus_tag=b0116;gene_synonym=dhl;gene_synonym=ECK0115;gene_synonym=JW0112;gene_synonym=lpdA;db_xref=EcoGene:EG10543 EMBL CDS 127912 129336 . + 0 ID=.241;gene=lpd;locus_tag=b0116;gene_synonym=dhl;gene_synonym=ECK0115;gene_synonym=JW0112;gene_synonym=lpdA;ec_number=1.8.1.4;function=enzyme%3B Energy metabolism%2C carbon: Pyruvate dehydrogenase;note=lipoamide dehydrogenase (NADH)%3B component of 2-oxodehydrogenase and pyruvate complexes%3B L-protein of glycine cleavage complex%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0009063 - cellular amino acid catabolic process%3B GO_process: GO:0006096 - glycolysis%3B GO_process: GO:0006086 - acetyl-CoA biosynthetic process from pyruvate%3B GO_process: GO:0006099 - tricarboxylic acid cycle%3B GO_process: GO:0009060 - aerobic respiration%3B GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0009436 - glyoxylate catabolic process;codon_start=1;transl_table=11;product=dihydrolipoyl dehydrogenase%3B E3 component of pyruvate and 2-oxoglutarate dehydrogenases complexes%3B glycine cleavage system L protein%3B dihydrolipoamide dehydrogenase;protein_id=AAC73227.1;db_xref=GI:1786307;db_xref=ASAP:ABE-0000404;db_xref=UniProtKB/Swiss-Prot:P0A9P0;db_xref=EcoGene:EG10543 EMBL repeat_region 129347 129361 . + . ID=.242;note=REP9 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 129407 131260 . - . ID=.243;gene=yacH;locus_tag=b0117;gene_synonym=ECK0116;gene_synonym=JW0113;db_xref=EcoGene:EG12315 EMBL CDS 129407 131260 . - 0 ID=.244;gene=yacH;locus_tag=b0117;gene_synonym=ECK0116;gene_synonym=JW0113;function=putative membrane%3B Not classified;note=putative membrane protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=DUF3300 family protein;protein_id=AAC73228.1;db_xref=GI:1786308;db_xref=ASAP:ABE-0000406;db_xref=UniProtKB/Swiss-Prot:P36682;db_xref=EcoGene:EG12315 EMBL gene 131615 134212 . + . ID=.245;gene=acnB;locus_tag=b0118;gene_synonym=ECK0117;gene_synonym=JW0114;gene_synonym=yacI;gene_synonym=yacJ;db_xref=EcoGene:EG12316 EMBL CDS 131615 134212 . + 0 ID=.246;gene=acnB;locus_tag=b0118;gene_synonym=ECK0117;gene_synonym=JW0114;gene_synonym=yacI;gene_synonym=yacJ;ec_number=4.2.1.3;ec_number=4.2.1.99;function=enzyme%3B Energy metabolism%2C carbon: TCA cycle;experiment=N-terminus verified by Edman degradation: PMID 8932712%2C9298646%2C12473114;note=aconitate hydrase B%3B GO_process: GO:0006099 - tricarboxylic acid cycle%3B GO_process: GO:0009060 - aerobic respiration%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=aconitate hydratase 2%3B aconitase B%3B 2-methyl-cis-aconitate hydratase;protein_id=AAC73229.1;db_xref=GI:2367097;db_xref=ASAP:ABE-0000411;db_xref=UniProtKB/Swiss-Prot:P36683;db_xref=EcoGene:EG12316 EMBL gene 134388 134750 . + . ID=.247;gene=yacL;locus_tag=b0119;gene_synonym=ECK0118;gene_synonym=JW0115;db_xref=EcoGene:EG12605 EMBL CDS 134388 134750 . + 0 ID=.248;gene=yacL;locus_tag=b0119;gene_synonym=ECK0118;gene_synonym=JW0115;codon_start=1;transl_table=11;product=UPF0231 family protein;protein_id=AAC73230.2;db_xref=GI:87081687;db_xref=ASAP:ABE-0000414;db_xref=UniProtKB/Swiss-Prot:P0A8E5;db_xref=EcoGene:EG12605 EMBL gene 134788 135582 . - . ID=.249;gene=speD;locus_tag=b0120;gene_synonym=ECK0119;gene_synonym=JW0116;db_xref=EcoGene:EG10962 EMBL CDS 134788 135582 . - 0 ID=.250;gene=speD;locus_tag=b0120;gene_synonym=ECK0119;gene_synonym=JW0116;ec_number=4.1.1.50;function=enzyme%3B Central intermediary metabolism: Polyamine biosynthesis;experiment=N-terminus verified by Edman degradation: PMID 3546296;note=GO_process: GO:0006596 - polyamine biosynthetic process;codon_start=1;transl_table=11;product=S-adenosylmethionine decarboxylase;protein_id=AAC73231.1;db_xref=GI:1786311;db_xref=ASAP:ABE-0000416;db_xref=UniProtKB/Swiss-Prot:P0A7F6;db_xref=EcoGene:EG10962 EMBL gene 135598 136464 . - . ID=.251;gene=speE;locus_tag=b0121;gene_synonym=ECK0120;gene_synonym=JW0117;db_xref=EcoGene:EG10963 EMBL CDS 135598 136464 . - 0 ID=.252;gene=speE;locus_tag=b0121;gene_synonym=ECK0120;gene_synonym=JW0117;ec_number=2.5.1.16;function=enzyme%3B Central intermediary metabolism: Polyamine biosynthesis;note=spermidine synthase %3D putrescine aminopropyltransferase%3B GO_process: GO:0006596 - polyamine biosynthetic process;codon_start=1;transl_table=11;product=spermidine synthase (putrescine aminopropyltransferase);protein_id=AAC73232.1;db_xref=GI:1786312;db_xref=ASAP:ABE-0000418;db_xref=UniProtKB/Swiss-Prot:P09158;db_xref=EcoGene:EG10963 EMBL gene 136570 136917 . - . ID=.253;gene=yacC;locus_tag=b0122;gene_synonym=ECK0121;gene_synonym=gspS;gene_synonym=JW0118;db_xref=EcoGene:EG11089 EMBL CDS 136570 136917 . - 0 ID=.254;gene=yacC;locus_tag=b0122;gene_synonym=ECK0121;gene_synonym=gspS;gene_synonym=JW0118;codon_start=1;transl_table=11;product=PulS_OutS family protein;protein_id=AAC73233.2;db_xref=GI:87081688;db_xref=ASAP:ABE-0000423;db_xref=UniProtKB/Swiss-Prot:P0AA95;db_xref=EcoGene:EG11089 EMBL gene 137083 138633 . + . ID=.255;gene=cueO;locus_tag=b0123;gene_synonym=cuiD;gene_synonym=ECK0122;gene_synonym=JW0119;gene_synonym=yacK;db_xref=EcoGene:EG12318 EMBL CDS 137083 138633 . + 0 ID=.256;gene=cueO;locus_tag=b0123;gene_synonym=cuiD;gene_synonym=ECK0122;gene_synonym=JW0119;gene_synonym=yacK;codon_start=1;transl_table=11;product=multicopper oxidase (laccase);protein_id=AAC73234.1;db_xref=GI:1786314;db_xref=ASAP:ABE-0000430;db_xref=UniProtKB/Swiss-Prot:P36649;db_xref=EcoGene:EG12318 EMBL repeat_region 138699 138796 . + . ID=.257;note=RIP10 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 138835 141225 . - . ID=.258;gene=gcd;locus_tag=b0124;gene_synonym=ECK0123;gene_synonym=JW0120;db_xref=EcoGene:EG10369 EMBL CDS 138835 141225 . - 0 ID=.259;gene=gcd;locus_tag=b0124;gene_synonym=ECK0123;gene_synonym=JW0120;ec_number=1.1.5.2;function=enzyme%3B Degradation of small molecules: Carbon compounds;experiment=N-terminus verified by Edman degradation: PMID 8509415;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006006 - glucose metabolic process%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=glucose dehydrogenase;protein_id=AAC73235.1;db_xref=GI:1786316;db_xref=ASAP:ABE-0000433;db_xref=UniProtKB/Swiss-Prot:P15877;db_xref=EcoGene:EG10369 EMBL gene 141431 141967 . + . ID=.260;gene=hpt;locus_tag=b0125;gene_synonym=ECK0124;gene_synonym=JW5009;db_xref=EcoGene:EG20098 EMBL CDS 141431 141967 . + 0 ID=.261;gene=hpt;locus_tag=b0125;gene_synonym=ECK0124;gene_synonym=JW5009;ec_number=2.4.2.8;function=enzyme%3B Salvage of nucleosides and nucleotides;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion;codon_start=1;transl_table=11;product=hypoxanthine phosphoribosyltransferase;protein_id=AAC73236.2;db_xref=GI:87081689;db_xref=ASAP:ABE-0000440;db_xref=UniProtKB/Swiss-Prot:P0A9M2;db_xref=EcoGene:EG20098 EMBL repeat_region 141978 141998 . + . ID=.262;note=REP11 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 142008 142670 . - . ID=.263;gene=can;locus_tag=b0126;gene_synonym=ECK0125;gene_synonym=JW0122;gene_synonym=yadF;db_xref=EcoGene:EG12319 EMBL CDS 142008 142670 . - 0 ID=.264;gene=can;locus_tag=b0126;gene_synonym=ECK0125;gene_synonym=JW0122;gene_synonym=yadF;ec_number=4.2.1.1;function=enzyme%3B Central intermediary metabolism: Pool%2C multipurpose conversions;note=putative carbonic anhdrase;codon_start=1;transl_table=11;product=carbonic anhydrase;protein_id=AAC73237.1;db_xref=GI:1786318;db_xref=ASAP:ABE-0000442;db_xref=UniProtKB/Swiss-Prot:P61517;db_xref=EcoGene:EG12319 EMBL gene 142779 143705 . + . ID=.265;gene=yadG;locus_tag=b0127;gene_synonym=ECK0126;gene_synonym=JW0123;db_xref=EcoGene:EG12320 EMBL CDS 142779 143705 . + 0 ID=.266;gene=yadG;locus_tag=b0127;gene_synonym=ECK0126;gene_synonym=JW0123;function=putative transport%3B Not classified;note=putative ATP-binding component of a transport system%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=putative ABC transporter ATPase;protein_id=AAC73238.1;db_xref=GI:1786319;db_xref=ASAP:ABE-0000447;db_xref=UniProtKB/Swiss-Prot:P36879;db_xref=EcoGene:EG12320 EMBL gene 143702 144472 . + . ID=.267;gene=yadH;locus_tag=b0128;gene_synonym=ECK0127;gene_synonym=JW0124;db_xref=EcoGene:EG12321 EMBL CDS 143702 144472 . + 0 ID=.268;gene=yadH;locus_tag=b0128;gene_synonym=ECK0127;gene_synonym=JW0124;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative ABC transporter permease;protein_id=AAC73239.1;db_xref=GI:1786320;db_xref=ASAP:ABE-0000450;db_xref=UniProtKB/Swiss-Prot:P0AFN6;db_xref=EcoGene:EG12321 EMBL gene 144577 145017 . + . ID=.269;gene=yadI;locus_tag=b0129;gene_synonym=agaX;gene_synonym=ECK0128;gene_synonym=JW0125;db_xref=EcoGene:EG12322 EMBL CDS 144577 145017 . + 0 ID=.270;gene=yadI;locus_tag=b0129;gene_synonym=agaX;gene_synonym=ECK0128;gene_synonym=JW0125;function=putative transport%3B Not classified;note=putative PTS enzyme II B component%3B GO_process: GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system;codon_start=1;transl_table=11;product=putative PTS Enzyme IIA;protein_id=AAC73240.1;db_xref=GI:1786321;db_xref=ASAP:ABE-0000453;db_xref=UniProtKB/Swiss-Prot:P36881;db_xref=EcoGene:EG12322 EMBL gene 145081 146310 . + . ID=.271;gene=yadE;locus_tag=b0130;gene_synonym=ECK0129;gene_synonym=JW0126;db_xref=EcoGene:EG11749 EMBL CDS 145081 146310 . + 0 ID=.272;gene=yadE;locus_tag=b0130;gene_synonym=ECK0129;gene_synonym=JW0126;note=conserved hypothetical protein;codon_start=1;transl_table=11;product=putative polysaccharide deacetylase lipoprotein;protein_id=AAC73241.1;db_xref=GI:1786322;db_xref=ASAP:ABE-0000457;db_xref=UniProtKB/Swiss-Prot:P31666;db_xref=EcoGene:EG11749 EMBL gene 146314 146694 . - . ID=.273;gene=panD;locus_tag=b0131;gene_synonym=ECK0130;gene_synonym=JW0127;db_xref=EcoGene:EG11747 EMBL CDS 146314 146694 . - 0 ID=.274;gene=panD;locus_tag=b0131;gene_synonym=ECK0130;gene_synonym=JW0127;ec_number=4.1.1.11;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Pantothenate;experiment=N-terminus verified by Edman degradation: PMID 9169598;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0015937 - coenzyme A biosynthetic process;codon_start=1;transl_table=11;product=aspartate 1-decarboxylase;protein_id=AAC73242.1;db_xref=GI:1786323;db_xref=ASAP:ABE-0000459;db_xref=UniProtKB/Swiss-Prot:P0A790;db_xref=EcoGene:EG11747 EMBL gene 146968 147870 . + . ID=.275;gene=yadD;locus_tag=b0132;gene_synonym=ECK0131;gene_synonym=JW5010;db_xref=EcoGene:EG11748 EMBL CDS 146968 147870 . + 0 ID=.276;gene=yadD;locus_tag=b0132;gene_synonym=ECK0131;gene_synonym=JW5010;codon_start=1;transl_table=11;product=transposase_31 family protein;protein_id=AAC73243.1;db_xref=GI:1786324;db_xref=ASAP:ABE-0000463;db_xref=UniProtKB/Swiss-Prot:P31665;db_xref=EcoGene:EG11748 EMBL gene 147944 148795 . - . ID=.277;gene=panC;locus_tag=b0133;gene_synonym=ECK0132;gene_synonym=JW0129;db_xref=EcoGene:EG11746 EMBL CDS 147944 148795 . - 0 ID=.278;gene=panC;locus_tag=b0133;gene_synonym=ECK0132;gene_synonym=JW0129;ec_number=6.3.2.1;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Pantothenate;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0015937 - coenzyme A biosynthetic process;codon_start=1;transl_table=11;product=pantothenate synthetase;protein_id=AAC73244.1;db_xref=GI:1786325;db_xref=ASAP:ABE-0000465;db_xref=UniProtKB/Swiss-Prot:P31663;db_xref=EcoGene:EG11746 EMBL gene 148807 149601 . - . ID=.279;gene=panB;locus_tag=b0134;gene_synonym=ECK0133;gene_synonym=JW0130;gene_synonym=panA;db_xref=EcoGene:EG11675 EMBL CDS 148807 149601 . - 0 ID=.280;gene=panB;locus_tag=b0134;gene_synonym=ECK0133;gene_synonym=JW0130;gene_synonym=panA;ec_number=2.1.2.11;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Pantothenate;experiment=N-terminus verified by Edman degradation: PMID 8096212%2C9298646;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0015937 - coenzyme A biosynthetic process;codon_start=1;transl_table=11;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=AAC73245.1;db_xref=GI:1786326;db_xref=ASAP:ABE-0000467;db_xref=UniProtKB/Swiss-Prot:P31057;db_xref=EcoGene:EG11675 EMBL gene 149715 150953 . - . ID=.281;gene=yadC;locus_tag=b0135;gene_synonym=ECK0134;gene_synonym=JW0131;db_xref=EcoGene:EG11678 EMBL CDS 149715 150953 . - 0 ID=.282;gene=yadC;locus_tag=b0135;gene_synonym=ECK0134;gene_synonym=JW0131;function=putative structural component%3B Surface structures;note=putative fimbrial-like protein%3B GO_component: GO:0009289 - pilus;codon_start=1;transl_table=11;product=putative fimbrial-like adhesin protein;protein_id=AAC73246.1;db_xref=GI:1786328;db_xref=ASAP:ABE-0000470;db_xref=UniProtKB/Swiss-Prot:P31058;db_xref=EcoGene:EG11678 EMBL gene 151003 151599 . - . ID=.283;gene=yadK;locus_tag=b0136;gene_synonym=ECK0135;gene_synonym=JW0132;db_xref=EcoGene:EG12325 EMBL CDS 151003 151599 . - 0 ID=.284;gene=yadK;locus_tag=b0136;gene_synonym=ECK0135;gene_synonym=JW0132;function=putative structural component%3B Surface structures;note=putative fimbrial protein;codon_start=1;transl_table=11;product=putative fimbrial-like adhesin protein;protein_id=AAC73247.1;db_xref=GI:1786329;db_xref=ASAP:ABE-0000472;db_xref=UniProtKB/Swiss-Prot:P37016;db_xref=EcoGene:EG12325 EMBL gene 151626 152231 . - . ID=.285;gene=yadL;locus_tag=b0137;gene_synonym=ECK0136;gene_synonym=JW0133;db_xref=EcoGene:EG12326 EMBL CDS 151626 152231 . - 0 ID=.286;gene=yadL;locus_tag=b0137;gene_synonym=ECK0136;gene_synonym=JW0133;function=putative structural component%3B Surface structures;note=putative fimbrial protein;codon_start=1;transl_table=11;product=putative fimbrial-like adhesin protein;protein_id=AAC73248.1;db_xref=GI:1786330;db_xref=ASAP:ABE-0000475;db_xref=UniProtKB/Swiss-Prot:P37017;db_xref=EcoGene:EG12326 EMBL gene 152243 152812 . - . ID=.287;gene=yadM;locus_tag=b0138;gene_synonym=ECK0137;gene_synonym=JW0134;db_xref=EcoGene:EG12327 EMBL CDS 152243 152812 . - 0 ID=.288;gene=yadM;locus_tag=b0138;gene_synonym=ECK0137;gene_synonym=JW0134;function=putative structural component%3B Surface structures;note=putative fimbrial-like protein%3B GO_component: GO:0009289 - pilus;codon_start=1;transl_table=11;product=putative fimbrial-like adhesin protein;protein_id=AAC73249.2;db_xref=GI:87081690;db_xref=ASAP:ABE-0000477;db_xref=UniProtKB/Swiss-Prot:P37018;db_xref=EcoGene:EG12327 EMBL gene 152829 155426 . - . ID=.289;gene=htrE;locus_tag=b0139;gene_synonym=ECK0138;gene_synonym=JW0135;db_xref=EcoGene:EG11972 EMBL CDS 152829 155426 . - 0 ID=.290;gene=htrE;locus_tag=b0139;gene_synonym=ECK0138;gene_synonym=JW0135;function=putative membrane%3B Surface structures;note=probable outer membrane porin protein involved in fimbrial assembly%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane;codon_start=1;transl_table=11;product=putative outer membrane usher protein;protein_id=AAC73250.1;db_xref=GI:1786332;db_xref=ASAP:ABE-0000479;db_xref=UniProtKB/Swiss-Prot:P33129;db_xref=EcoGene:EG11972 EMBL gene 155461 156201 . - . ID=.291;gene=yadV;locus_tag=b0140;gene_synonym=ECK0139;gene_synonym=ecpD;gene_synonym=JW0136;db_xref=EcoGene:EG11973 EMBL CDS 155461 156201 . - 0 ID=.292;gene=yadV;locus_tag=b0140;gene_synonym=ECK0139;gene_synonym=ecpD;gene_synonym=JW0136;function=putative factor%3B Surface structures;note=probable pilin chaperone similar to PapD%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=putative periplasmic pilin chaperone;protein_id=AAC73251.1;db_xref=GI:1786333;db_xref=ASAP:ABE-0000482;db_xref=UniProtKB/Swiss-Prot:P33128;db_xref=EcoGene:EG11973 EMBL gene 156299 156883 . - . ID=.293;gene=yadN;locus_tag=b0141;gene_synonym=ECK0140;gene_synonym=JW0137;db_xref=EcoGene:EG12328 EMBL CDS 156299 156883 . - 0 ID=.294;gene=yadN;locus_tag=b0141;gene_synonym=ECK0140;gene_synonym=JW0137;function=putative structural component%3B Surface structures;note=putative fimbrial-like protein%3B GO_component: GO:0009289 - pilus;codon_start=1;transl_table=11;product=putative fimbrial-like adhesin protein;protein_id=AAC73252.1;db_xref=GI:1786334;db_xref=ASAP:ABE-0000487;db_xref=UniProtKB/Swiss-Prot:P37050;db_xref=EcoGene:EG12328 EMBL gene 157253 157732 . - . ID=.295;gene=folK;locus_tag=b0142;gene_synonym=ECK0141;gene_synonym=JW0138;db_xref=EcoGene:EG11374 EMBL CDS 157253 157732 . - 0 ID=.296;gene=folK;locus_tag=b0142;gene_synonym=ECK0141;gene_synonym=JW0138;ec_number=2.7.6.3;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Folic acid;note=7%2C8-dihydro-6-hydroxymethylpterin- pyrophosphokinase%3B GO_process: GO:0046656 - folic acid biosynthetic process;codon_start=1;transl_table=11;product=2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase;protein_id=AAC73253.1;db_xref=GI:1786335;db_xref=ASAP:ABE-0000491;db_xref=UniProtKB/Swiss-Prot:P26281;db_xref=EcoGene:EG11374 EMBL gene 157729 159126 . - . ID=.297;gene=pcnB;locus_tag=b0143;gene_synonym=ECK0142;gene_synonym=JW5808;db_xref=EcoGene:EG10690 EMBL CDS 157729 159126 . - 0 ID=.298;gene=pcnB;locus_tag=b0143;gene_synonym=ECK0142;gene_synonym=JW5808;ec_number=2.7.7.19;function=enzyme%3B RNA synthesis%2C modification%2C DNA transcription;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009451 - RNA modification;codon_start=1;transl_table=11;product=poly(A) polymerase;protein_id=AAC73254.2;db_xref=GI:87081691;db_xref=ASAP:ABE-0000493;db_xref=UniProtKB/Swiss-Prot:P0ABF1;db_xref=EcoGene:EG10690 EMBL gene 159186 160112 . - . ID=.299;gene=gluQ;locus_tag=b0144;gene_synonym=ECK0143;gene_synonym=JW5892;gene_synonym=yadB;db_xref=EcoGene:EG11362 EMBL CDS 159186 160112 . - 0 ID=.300;gene=gluQ;locus_tag=b0144;gene_synonym=ECK0143;gene_synonym=JW5892;gene_synonym=yadB;ec_number=6.1.1.-;function=putative enzyme%3B Aminoacyl tRNA synthetases%2C tRNA modification;note=putative tRNA synthetase%3B GO_process: GO:0006418 - tRNA aminoacylation for protein translation;codon_start=1;transl_table=11;product=glutamyl-Q tRNA(Asp) synthetase;protein_id=AAC73255.3;db_xref=GI:226510925;db_xref=ASAP:ABE-0000497;db_xref=UniProtKB/Swiss-Prot:P27305;db_xref=EcoGene:EG11362 EMBL gene 160149 160604 . - . ID=.301;gene=dksA;locus_tag=b0145;gene_synonym=ECK0144;gene_synonym=JW0141;gene_synonym=msmA;db_xref=EcoGene:EG10230 EMBL CDS 160149 160604 . - 0 ID=.302;gene=dksA;locus_tag=b0145;gene_synonym=ECK0144;gene_synonym=JW0141;gene_synonym=msmA;function=phenotype%3B DNA - replication%2C repair%2C restriction/modification;experiment=N-terminus verified by Edman degradation: PMID 9298646%2C9600841%2C9740056;note=dnaK suppressor protein%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=transcriptional regulator of rRNA transcription%3B DnaK suppressor protein;protein_id=AAC73256.1;db_xref=GI:1786338;db_xref=ASAP:ABE-0000499;db_xref=UniProtKB/Swiss-Prot:P0ABS1;db_xref=EcoGene:EG10230 EMBL gene 160782 161486 . - . ID=.303;gene=sfsA;locus_tag=b0146;gene_synonym=ECK0145;gene_synonym=JW0142;gene_synonym=sfs;gene_synonym=sfs1;db_xref=EcoGene:EG10949 EMBL CDS 160782 161486 . - 0 ID=.304;gene=sfsA;locus_tag=b0146;gene_synonym=ECK0145;gene_synonym=JW0142;gene_synonym=sfs;gene_synonym=sfs1;function=putative regulator%3B Degradation of small molecules: Carbon compounds;note=probable regulator for maltose metabolism%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=sugar fermentation stimulation protein A;protein_id=AAC73257.1;db_xref=GI:1786340;db_xref=ASAP:ABE-0000503;db_xref=UniProtKB/Swiss-Prot:P0A823;db_xref=EcoGene:EG10949 EMBL gene 161501 162031 . - . ID=.305;gene=ligT;locus_tag=b0147;gene_synonym=ECK0146;gene_synonym=JW5011;gene_synonym=yadP;db_xref=EcoGene:EG12330 EMBL CDS 161501 162031 . - 0 ID=.306;gene=ligT;locus_tag=b0147;gene_synonym=ECK0146;gene_synonym=JW5011;gene_synonym=yadP;ec_number=6.5.1.-;function=enzyme%3B tRNA modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009451 - RNA modification;codon_start=1;transl_table=11;product=2'-5' RNA ligase;protein_id=AAC73258.2;db_xref=GI:87081692;db_xref=ASAP:ABE-0000505;db_xref=UniProtKB/Swiss-Prot:P37025;db_xref=EcoGene:EG12330 EMBL gene 162105 164534 . + . ID=.307;gene=hrpB;locus_tag=b0148;gene_synonym=ECK0147;gene_synonym=JW0144;gene_synonym=yadO;db_xref=EcoGene:EG12329 EMBL CDS 162105 164534 . + 0 ID=.308;gene=hrpB;locus_tag=b0148;gene_synonym=ECK0147;gene_synonym=JW0144;gene_synonym=yadO;function=enzyme%3B DNA - replication%2C repair%2C restriction/modification;note=helicase%2C ATP-dependent%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006261 - DNA-dependent DNA replication;codon_start=1;transl_table=11;product=putative ATP-dependent helicase;protein_id=AAC73259.2;db_xref=GI:87081693;db_xref=ASAP:ABE-0000510;db_xref=UniProtKB/Swiss-Prot:P37024;db_xref=EcoGene:EG12329 EMBL gene 164730 167264 . + . ID=.309;gene=mrcB;locus_tag=b0149;gene_synonym=ECK0148;gene_synonym=JW0145;gene_synonym=pbpF;gene_synonym=ponB;db_xref=EcoGene:EG10605 EMBL CDS 164730 167264 . + 0 ID=.310;gene=mrcB;locus_tag=b0149;gene_synonym=ECK0148;gene_synonym=JW0145;gene_synonym=pbpF;gene_synonym=ponB;ec_number=2.4.1.129;ec_number=3.4.-.-;function=enzyme%3B Murein sacculus%2C peptidoglycan;note=peptidoglycan synthetase%3B penicillin-binding protein 1B%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0046349 - amino sugar biosynthetic process%3B GO_process: GO:0009252 - peptidoglycan biosynthetic process%3B GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=fused glycosyl transferase and transpeptidase;protein_id=AAC73260.1;db_xref=GI:1786343;db_xref=ASAP:ABE-0000516;db_xref=UniProtKB/Swiss-Prot:P02919;db_xref=EcoGene:EG10605 EMBL repeat_region 167281 167305 . + . ID=.311;note=REP12 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 167484 169727 . + . ID=.312;gene=fhuA;locus_tag=b0150;gene_synonym=ECK0149;gene_synonym=JW0146;gene_synonym=T1;gene_synonym=tonA;db_xref=EcoGene:EG10302 EMBL CDS 167484 169727 . + 0 ID=.313;gene=fhuA;locus_tag=b0150;gene_synonym=ECK0149;gene_synonym=JW0146;gene_synonym=T1;gene_synonym=tonA;function=membrane%3B Outer membrane constituents;note=outer membrane protein receptor for ferrichrome%2C colicin M%2C and phages T1%2C T5%2C and phi80%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane;codon_start=1;transl_table=11;product=ferrichrome outer membrane transporter;protein_id=AAC73261.1;db_xref=GI:1786344;db_xref=ASAP:ABE-0000520;db_xref=UniProtKB/Swiss-Prot:P06971;db_xref=EcoGene:EG10302 EMBL gene 169778 170575 . + . ID=.314;gene=fhuC;locus_tag=b0151;gene_synonym=ECK0150;gene_synonym=JW0147;db_xref=EcoGene:EG10304 EMBL CDS 169778 170575 . + 0 ID=.315;gene=fhuC;locus_tag=b0151;gene_synonym=ECK0150;gene_synonym=JW0147;function=transport%3B Transport of small molecules: Cations;note=ATP-binding component of hydroxymate-dependent iron transport%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=iron(3+)-hydroxamate import ABC transporter ATPase;protein_id=AAC73262.1;db_xref=GI:1786345;db_xref=ASAP:ABE-0000522;db_xref=UniProtKB/Swiss-Prot:P07821;db_xref=EcoGene:EG10304 EMBL gene 170575 171465 . + . ID=.316;gene=fhuD;locus_tag=b0152;gene_synonym=ECK0151;gene_synonym=JW0148;db_xref=EcoGene:EG10305 EMBL CDS 170575 171465 . + 0 ID=.317;gene=fhuD;locus_tag=b0152;gene_synonym=ECK0151;gene_synonym=JW0148;function=transport%3B Transport of small molecules: Cations;note=hydroxamate-dependent iron uptake%2C cytoplasmic membrane component%3B periplasmic-binding component of ABC superfamily%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0006826 - iron ion transport;codon_start=1;transl_table=11;product=iron(3+)-hydroxamate import ABC transporter periplasmic binding protein;protein_id=AAC73263.1;db_xref=GI:1786346;db_xref=ASAP:ABE-0000524;db_xref=UniProtKB/Swiss-Prot:P07822;db_xref=EcoGene:EG10305 EMBL gene 171462 173444 . + . ID=.318;gene=fhuB;locus_tag=b0153;gene_synonym=ECK0152;gene_synonym=JW0149;db_xref=EcoGene:EG10303 EMBL CDS 171462 173444 . + 0 ID=.319;gene=fhuB;locus_tag=b0153;gene_synonym=ECK0152;gene_synonym=JW0149;function=transport%3B Transport of small molecules: Cations;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=iron(3+)-hydroxamate import ABC transporter permease;protein_id=AAC73264.1;db_xref=GI:1786347;db_xref=ASAP:ABE-0000526;db_xref=UniProtKB/Swiss-Prot:P06972;db_xref=EcoGene:EG10303 EMBL repeat_region 173504 173588 . + . ID=.320;note=REP13 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 173602 174882 . - . ID=.321;gene=hemL;locus_tag=b0154;gene_synonym=ECK0153;gene_synonym=gsa?;gene_synonym=JW0150;gene_synonym=popC;db_xref=EcoGene:EG10432 EMBL CDS 173602 174882 . - 0 ID=.322;gene=hemL;locus_tag=b0154;gene_synonym=ECK0153;gene_synonym=gsa?;gene_synonym=JW0150;gene_synonym=popC;ec_number=5.4.3.8;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Heme%2C porphyrin;codon_start=1;transl_table=11;product=glutamate-1-semialdehyde aminotransferase (aminomutase);protein_id=AAC73265.1;db_xref=GI:1786349;db_xref=ASAP:ABE-0000529;db_xref=UniProtKB/Swiss-Prot:P23893;db_xref=EcoGene:EG10432 EMBL gene 175107 176528 . + . ID=.323;gene=clcA;locus_tag=b0155;gene_synonym=ECK0154;gene_synonym=eriC;gene_synonym=JW5012;gene_synonym=yadQ;db_xref=EcoGene:EG12331 EMBL CDS 175107 176528 . + 0 ID=.324;gene=clcA;locus_tag=b0155;gene_synonym=ECK0154;gene_synonym=eriC;gene_synonym=JW5012;gene_synonym=yadQ;function=transport%3B Not classified;note=putative channel transporter;codon_start=1;transl_table=11;product=H(+)/Cl(-) exchange transporter;protein_id=AAC73266.1;db_xref=GI:1786350;db_xref=ASAP:ABE-0000533;db_xref=UniProtKB/Swiss-Prot:P37019;db_xref=EcoGene:EG12331 EMBL gene 176610 176954 . + . ID=.325;gene=erpA;locus_tag=b0156;gene_synonym=ECK0155;gene_synonym=JW0152;gene_synonym=yadR;db_xref=EcoGene:EG12332 EMBL CDS 176610 176954 . + 0 ID=.326;gene=erpA;locus_tag=b0156;gene_synonym=ECK0155;gene_synonym=JW0152;gene_synonym=yadR;codon_start=1;transl_table=11;product=iron-sulfur cluster insertion protein;protein_id=AAC73267.1;db_xref=GI:1786351;db_xref=ASAP:ABE-0000538;db_xref=UniProtKB/Swiss-Prot:P0ACC3;db_xref=EcoGene:EG12332 EMBL repeat_region 176969 176987 . + . ID=.327;note=REP14 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 177001 177624 . - . ID=.328;gene=yadS;locus_tag=b0157;gene_synonym=ECK0156;gene_synonym=JW0153;db_xref=EcoGene:EG12333 EMBL CDS 177001 177624 . - 0 ID=.329;gene=yadS;locus_tag=b0157;gene_synonym=ECK0156;gene_synonym=JW0153;codon_start=1;transl_table=11;product=UPF0126 family inner membrane protein;protein_id=AAC73268.1;db_xref=GI:1786352;db_xref=ASAP:ABE-0000540;db_xref=UniProtKB/Swiss-Prot:P0AFP0;db_xref=EcoGene:EG12333 EMBL gene 177662 178462 . - . ID=.330;gene=btuF;locus_tag=b0158;gene_synonym=ECK0157;gene_synonym=JW0154;gene_synonym=yadT;db_xref=EcoGene:EG12334 EMBL CDS 177662 178462 . - 0 ID=.331;gene=btuF;locus_tag=b0158;gene_synonym=ECK0157;gene_synonym=JW0154;gene_synonym=yadT;note=GO_component: GO:0042597 - periplasmic space;codon_start=1;transl_table=11;product=vitamin B12 ABC transporter periplasmic binding protein;protein_id=AAC73269.1;db_xref=GI:1786353;db_xref=ASAP:ABE-0000542;db_xref=UniProtKB/Swiss-Prot:P37028;db_xref=EcoGene:EG12334 EMBL gene 178455 179153 . - . ID=.332;gene=mtn;locus_tag=b0159;gene_synonym=ECK0158;gene_synonym=JW0155;gene_synonym=mtnN;gene_synonym=pfs;gene_synonym=yadA;db_xref=EcoGene:EG11090 EMBL CDS 178455 179153 . - 0 ID=.333;gene=mtn;locus_tag=b0159;gene_synonym=ECK0158;gene_synonym=JW0155;gene_synonym=mtnN;gene_synonym=pfs;gene_synonym=yadA;ec_number=3.2.2.16;ec_number=3.2.2.9;note=GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion;codon_start=1;transl_table=11;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=AAC73270.1;db_xref=GI:1786354;db_xref=ASAP:ABE-0000545;db_xref=UniProtKB/Swiss-Prot:P0AF12;db_xref=EcoGene:EG11090 EMBL gene 179237 180754 . + . ID=.334;gene=dgt;locus_tag=b0160;gene_synonym=ECK0159;gene_synonym=JW0156;gene_synonym=optA;db_xref=EcoGene:EG10225 EMBL CDS 179237 180754 . + 0 ID=.335;gene=dgt;locus_tag=b0160;gene_synonym=ECK0159;gene_synonym=JW0156;gene_synonym=optA;ec_number=3.1.5.1;function=enzyme%3B Central intermediary metabolism: Nucleotide hydrolysis;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion;codon_start=1;transl_table=11;product=deoxyguanosine triphosphate triphosphohydrolase;protein_id=AAC73271.1;db_xref=GI:1786355;db_xref=ASAP:ABE-0000548;db_xref=UniProtKB/Swiss-Prot:P15723;db_xref=EcoGene:EG10225 EMBL gene 180884 182308 . + . ID=.336;gene=degP;locus_tag=b0161;gene_synonym=ECK0160;gene_synonym=htrA;gene_synonym=JW0157;gene_synonym=ptd;db_xref=EcoGene:EG10463 EMBL CDS 180884 182308 . + 0 ID=.337;gene=degP;locus_tag=b0161;gene_synonym=ECK0160;gene_synonym=htrA;gene_synonym=JW0157;gene_synonym=ptd;ec_number=3.4.21.-;function=enzyme%3B Degradation of proteins%2C peptides%2C glycopeptides;note=periplasmic serine protease Do%3B heat shock protein HtrA%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0009266 - response to temperature stimulus;codon_start=1;transl_table=11;product=serine endoprotease (protease Do)%2C membrane-associated;protein_id=AAC73272.1;db_xref=GI:1786356;db_xref=ASAP:ABE-0000551;db_xref=UniProtKB/Swiss-Prot:P0C0V0;db_xref=EcoGene:EG10463 EMBL gene 182463 183620 . + . ID=.338;gene=cdaR;locus_tag=b0162;gene_synonym=ECK0161;gene_synonym=JW5013;gene_synonym=sdaR;gene_synonym=yaeG;db_xref=EcoGene:EG12335 EMBL CDS 182463 183620 . + 0 ID=.339;gene=cdaR;locus_tag=b0162;gene_synonym=ECK0161;gene_synonym=JW5013;gene_synonym=sdaR;gene_synonym=yaeG;function=regulator%3B Not classified;codon_start=1;transl_table=11;product=carbohydrate diacid regulon transcriptional regulator%3B autoregulator;protein_id=AAC73273.2;db_xref=GI:87081694;db_xref=ASAP:ABE-0000554;db_xref=UniProtKB/Swiss-Prot:P37047;db_xref=EcoGene:EG12335 EMBL gene 183709 184095 . - . ID=.340;gene=yaeH;locus_tag=b0163;gene_synonym=ECK0162;gene_synonym=JW0159;db_xref=EcoGene:EG12336 EMBL CDS 183709 184095 . - 0 ID=.341;gene=yaeH;locus_tag=b0163;gene_synonym=ECK0162;gene_synonym=JW0159;function=putative structure%3B Not classified;note=putative structural protein;codon_start=1;transl_table=11;product=UPF0325 family protein;protein_id=AAC73274.1;db_xref=GI:1786359;db_xref=ASAP:ABE-0000556;db_xref=UniProtKB/Swiss-Prot:P62768;db_xref=EcoGene:EG12336 EMBL gene 184257 185069 . - . ID=.342;gene=yaeI;locus_tag=b0164;gene_synonym=ECK0163;gene_synonym=JW5014;db_xref=EcoGene:EG12337 EMBL CDS 184257 185069 . - 0 ID=.343;gene=yaeI;locus_tag=b0164;gene_synonym=ECK0163;gene_synonym=JW5014;codon_start=1;transl_table=11;product=phosphodiesterase with model substrate bis-pNPP;protein_id=AAC73275.2;db_xref=GI:87081695;db_xref=ASAP:ABE-0000559;db_xref=UniProtKB/Swiss-Prot:P37049;db_xref=EcoGene:EG12337 EMBL gene 185123 185947 . - . ID=.344;gene=dapD;locus_tag=b0166;gene_synonym=ECK0164;gene_synonym=JW0161;gene_synonym=ssa;db_xref=EcoGene:EG10207 EMBL CDS 185123 185947 . - 0 ID=.345;gene=dapD;locus_tag=b0166;gene_synonym=ECK0164;gene_synonym=JW0161;gene_synonym=ssa;ec_number=2.3.1.117;function=enzyme%3B Amino acid biosynthesis: Lysine;experiment=N-terminus verified by Edman degradation: PMID 8740179%2C9298646;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009089 - lysine biosynthetic process via diaminopimelate;codon_start=1;transl_table=11;product=2%2C3%2C4%2C5-tetrahydropyridine-2-carboxylate N-succinyltransferase;protein_id=AAC73277.1;db_xref=GI:1786362;db_xref=ASAP:ABE-0000565;db_xref=UniProtKB/Swiss-Prot:P0A9D8;db_xref=EcoGene:EG10207 EMBL gene 185978 188650 . - . ID=.346;gene=glnD;locus_tag=b0167;gene_synonym=ECK0165;gene_synonym=JW0162;db_xref=EcoGene:EG11411 EMBL CDS 185978 188650 . - 0 ID=.347;gene=glnD;locus_tag=b0167;gene_synonym=ECK0165;gene_synonym=JW0162;ec_number=2.7.7.59;function=enzyme%3B Amino acid biosynthesis: Glutamine;note=protein PII%3B uridylyltransferase acts on regulator of glnA%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006807 - nitrogen compound metabolic process%3B GO_process: GO:0006542 - glutamine biosynthetic process%3B GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=uridylyltransferase;protein_id=AAC73278.1;db_xref=GI:1786363;db_xref=ASAP:ABE-0000568;db_xref=UniProtKB/Swiss-Prot:P27249;db_xref=EcoGene:EG11411 EMBL gene 188712 189506 . - . ID=.348;gene=map;locus_tag=b0168;gene_synonym=ECK0166;gene_synonym=JW0163;gene_synonym=pepM;db_xref=EcoGene:EG10570 EMBL CDS 188712 189506 . - 0 ID=.349;gene=map;locus_tag=b0168;gene_synonym=ECK0166;gene_synonym=JW0163;gene_synonym=pepM;ec_number=3.4.11.18;function=enzyme%3B Proteins - translation and modification;note=GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=methionine aminopeptidase;protein_id=AAC73279.1;db_xref=GI:1786364;db_xref=ASAP:ABE-0000571;db_xref=UniProtKB/Swiss-Prot:P0AE18;db_xref=EcoGene:EG10570 EMBL gene 189712 189847 . + . ID=.350;gene=tff;locus_tag=b4414;gene_synonym=ECK0167;gene_synonym=JWR0225;gene_synonym=t44;db_xref=EcoGene:EG31135 EMBL ncRNA 189712 189847 . + . ID=.351;ncrna_class=other;gene=tff;locus_tag=b4414;gene_synonym=ECK0167;gene_synonym=JWR0225;gene_synonym=t44;product=novel sRNA%2C function unknown;note=identified in a large scale screen;db_xref=ASAP:ABE-0047239;db_xref=EcoGene:EG31135 EMBL gene 189874 190599 . + . ID=.352;gene=rpsB;locus_tag=b0169;gene_synonym=ECK0168;gene_synonym=JW0164;db_xref=EcoGene:EG10901 EMBL CDS 189874 190599 . + 0 ID=.353;gene=rpsB;locus_tag=b0169;gene_synonym=ECK0168;gene_synonym=JW0164;function=structural component%3B Ribosomal proteins - synthesis%2C modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0003735 - structural constituent of ribosome%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=30S ribosomal subunit protein S2;protein_id=AAC73280.1;db_xref=GI:1786365;db_xref=ASAP:ABE-0000575;db_xref=UniProtKB/Swiss-Prot:P0A7V0;db_xref=EcoGene:EG10901 EMBL gene 190857 191708 . + . ID=.354;gene=tsf;locus_tag=b0170;gene_synonym=ECK0169;gene_synonym=JW0165;db_xref=EcoGene:EG11033 EMBL CDS 190857 191708 . + 0 ID=.355;gene=tsf;locus_tag=b0170;gene_synonym=ECK0169;gene_synonym=JW0165;function=factor%3B Proteins - translation and modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=translation elongation factor EF-Ts;protein_id=AAC73281.1;db_xref=GI:1786366;db_xref=ASAP:ABE-0000579;db_xref=UniProtKB/Swiss-Prot:P0A6P1;db_xref=EcoGene:EG11033 EMBL gene 191855 192580 . + . ID=.356;gene=pyrH;locus_tag=b0171;gene_synonym=ECK0170;gene_synonym=JW0166;gene_synonym=smbA;gene_synonym=umk;db_xref=EcoGene:EG11539 EMBL CDS 191855 192580 . + 0 ID=.357;gene=pyrH;locus_tag=b0171;gene_synonym=ECK0170;gene_synonym=JW0166;gene_synonym=smbA;gene_synonym=umk;ec_number=2.7.4.-;function=enzyme%3B Central intermediary metabolism: Nucleotide interconversions;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion;codon_start=1;transl_table=11;product=uridylate kinase;protein_id=AAC73282.1;db_xref=GI:1786367;db_xref=ASAP:ABE-0000582;db_xref=UniProtKB/Swiss-Prot:P0A7E9;db_xref=EcoGene:EG11539 EMBL gene 192872 193429 . + . ID=.358;gene=frr;locus_tag=b0172;gene_synonym=ECK0171;gene_synonym=JW0167;gene_synonym=rrf;db_xref=EcoGene:EG10335 EMBL CDS 192872 193429 . + 0 ID=.359;gene=frr;locus_tag=b0172;gene_synonym=ECK0171;gene_synonym=JW0167;gene_synonym=rrf;function=factor%3B Proteins - translation and modification;experiment=N-terminus verified by Edman degradation: PMID 2684966%2C8740179%2C9298646;note=ribosome releasing factor%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006412 - translation%3B GO_process: GO:0009386 - translational attenuation;codon_start=1;transl_table=11;product=ribosome recycling factor;protein_id=AAC73283.1;db_xref=GI:1786368;db_xref=ASAP:ABE-0000588;db_xref=UniProtKB/Swiss-Prot:P0A805;db_xref=EcoGene:EG10335 EMBL gene 193521 194717 . + . ID=.360;gene=dxr;locus_tag=b0173;gene_synonym=ECK0172;gene_synonym=ispC;gene_synonym=JW0168;gene_synonym=yaeM;db_xref=EcoGene:EG12715 EMBL CDS 193521 194717 . + 0 ID=.361;gene=dxr;locus_tag=b0173;gene_synonym=ECK0172;gene_synonym=ispC;gene_synonym=JW0168;gene_synonym=yaeM;ec_number=1.1.1.267;function=putative transport%3B Not classified;codon_start=1;transl_table=11;product=1-deoxy-D-xylulose 5-phosphate reductoisomerase;protein_id=AAC73284.1;db_xref=GI:1786369;db_xref=ASAP:ABE-0000592;db_xref=UniProtKB/Swiss-Prot:P45568;db_xref=EcoGene:EG12715 EMBL gene 194903 195664 . + . ID=.362;gene=ispU;locus_tag=b0174;gene_synonym=ECK0173;gene_synonym=JW0169;gene_synonym=rth;gene_synonym=uppS;gene_synonym=yaeS;db_xref=EcoGene:EG13329 EMBL CDS 194903 195664 . + 0 ID=.363;gene=ispU;locus_tag=b0174;gene_synonym=ECK0173;gene_synonym=JW0169;gene_synonym=rth;gene_synonym=uppS;gene_synonym=yaeS;ec_number=2.5.1.31;experiment=N-terminus verified by Edman degradation: PMID 9882662;note=undecaprenyl pyrophosphate synthetase (di-trans%2Cpoly-cis-decaprenylcistransferase)%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting;codon_start=1;transl_table=11;product=undecaprenyl pyrophosphate synthase;protein_id=AAC73285.1;db_xref=GI:1786371;db_xref=ASAP:ABE-0000595;db_xref=UniProtKB/Swiss-Prot:P60472;db_xref=EcoGene:EG13329 EMBL gene 195677 196534 . + . ID=.364;gene=cdsA;locus_tag=b0175;gene_synonym=ECK0174;gene_synonym=JW5810;db_xref=EcoGene:EG10139 EMBL CDS 195677 196534 . + 0 ID=.365;gene=cdsA;locus_tag=b0175;gene_synonym=ECK0174;gene_synonym=JW5810;ec_number=2.7.7.41;function=enzyme%3B Fatty acid and phosphatidic acid biosynthesis;note=CDP-diglyceride synthetase%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0008654 - phospholipid biosynthetic process;codon_start=1;transl_table=11;product=CDP-diglyceride synthase;protein_id=AAC73286.2;db_xref=GI:87081696;db_xref=ASAP:ABE-0000600;db_xref=UniProtKB/Swiss-Prot:P0ABG1;db_xref=EcoGene:EG10139 EMBL gene 196546 197898 . + . ID=.366;gene=rseP;locus_tag=b0176;gene_synonym=ecfE;gene_synonym=ECK0175;gene_synonym=JW0171;gene_synonym=yaeL;db_xref=EcoGene:EG12436 EMBL CDS 196546 197898 . + 0 ID=.367;gene=rseP;locus_tag=b0176;gene_synonym=ecfE;gene_synonym=ECK0175;gene_synonym=JW0171;gene_synonym=yaeL;ec_number=3.4.24.-;codon_start=1;transl_table=11;product=inner membrane zinc RIP metalloprotease%3B RpoE activator%2C by degrading RseA%3B cleaved signal peptide endoprotease;protein_id=AAC73287.1;db_xref=GI:1786373;db_xref=ASAP:ABE-0000603;db_xref=UniProtKB/Swiss-Prot:P0AEH1;db_xref=EcoGene:EG12436 EMBL gene 197928 200360 . + . ID=.368;gene=bamA;locus_tag=b0177;gene_synonym=ecfK;gene_synonym=ECK0176;gene_synonym=JW0172;gene_synonym=omp85;gene_synonym=yaeT;gene_synonym=yzzN;gene_synonym=yzzY;db_xref=EcoGene:EG12676 EMBL CDS 197928 200360 . + 0 ID=.369;gene=bamA;locus_tag=b0177;gene_synonym=ecfK;gene_synonym=ECK0176;gene_synonym=JW0172;gene_synonym=omp85;gene_synonym=yaeT;gene_synonym=yzzN;gene_synonym=yzzY;note=putative outer membrane antigen%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane;codon_start=1;transl_table=11;product=BamABCDE complex OM biogenesis outer membrane pore-forming assembly factor;protein_id=AAC73288.1;db_xref=GI:1786374;db_xref=ASAP:ABE-0000605;db_xref=UniProtKB/Swiss-Prot:P0A940;db_xref=EcoGene:EG12676 EMBL gene 200482 200967 . + . ID=.370;gene=skp;locus_tag=b0178;gene_synonym=ECK0177;gene_synonym=hlpA;gene_synonym=JW0173;gene_synonym=ompH;db_xref=EcoGene:EG10455 EMBL CDS 200482 200967 . + 0 ID=.371;gene=skp;locus_tag=b0178;gene_synonym=ECK0177;gene_synonym=hlpA;gene_synonym=JW0173;gene_synonym=ompH;function=factor%3B Basic proteins - synthesis%2C modification;note=periplasmic molecular chaperone for outer membrane proteins%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=periplasmic chaperone;protein_id=AAC73289.1;db_xref=GI:1786375;db_xref=ASAP:ABE-0000608;db_xref=UniProtKB/Swiss-Prot:P0AEU7;db_xref=EcoGene:EG10455 EMBL gene 200971 201996 . + . ID=.372;gene=lpxD;locus_tag=b0179;gene_synonym=ECK0178;gene_synonym=firA;gene_synonym=JW0174;gene_synonym=omsA;gene_synonym=ssc;db_xref=EcoGene:EG10316 EMBL CDS 200971 201996 . + 0 ID=.373;gene=lpxD;locus_tag=b0179;gene_synonym=ECK0178;gene_synonym=firA;gene_synonym=JW0174;gene_synonym=omsA;gene_synonym=ssc;ec_number=2.3.1.-;function=enzyme%3B Surface polysaccharides %26 antigens;note=GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0009245 - lipid A biosynthetic process;codon_start=1;transl_table=11;product=UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase;protein_id=AAC73290.1;db_xref=GI:1786376;db_xref=ASAP:ABE-0000610;db_xref=UniProtKB/Swiss-Prot:P21645;db_xref=EcoGene:EG10316 EMBL gene 202101 202556 . + . ID=.374;gene=fabZ;locus_tag=b0180;gene_synonym=ECK0179;gene_synonym=JW0175;gene_synonym=sabA;gene_synonym=sefA;gene_synonym=sfhC;gene_synonym=yaeA;db_xref=EcoGene:EG11284 EMBL CDS 202101 202556 . + 0 ID=.375;gene=fabZ;locus_tag=b0180;gene_synonym=ECK0179;gene_synonym=JW0175;gene_synonym=sabA;gene_synonym=sefA;gene_synonym=sfhC;gene_synonym=yaeA;ec_number=4.2.1.-;function=enzyme%3B Fatty acid and phosphatidic acid biosynthesis;note=GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=(3R)-hydroxymyristol acyl carrier protein dehydratase;protein_id=AAC73291.1;db_xref=GI:1786377;db_xref=ASAP:ABE-0000613;db_xref=UniProtKB/Swiss-Prot:P0A6Q6;db_xref=EcoGene:EG11284 EMBL gene 202560 203348 . + . ID=.376;gene=lpxA;locus_tag=b0181;gene_synonym=ECK0180;gene_synonym=JW0176;db_xref=EcoGene:EG10545 EMBL CDS 202560 203348 . + 0 ID=.377;gene=lpxA;locus_tag=b0181;gene_synonym=ECK0180;gene_synonym=JW0176;ec_number=2.3.1.129;function=enzyme%3B Surface polysaccharides %26 antigens;experiment=N-terminus verified by Edman degradation: PMID 8366124;note=UDP-N-acetylglucosamine acetyltransferase%3B lipid A biosynthesis%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0009245 - lipid A biosynthetic process;codon_start=1;transl_table=11;product=UDP-N-acetylglucosamine acetyltransferase;protein_id=AAC73292.1;db_xref=GI:1786378;db_xref=ASAP:ABE-0000618;db_xref=UniProtKB/Swiss-Prot:P0A722;db_xref=EcoGene:EG10545 EMBL gene 203348 204496 . + . ID=.378;gene=lpxB;locus_tag=b0182;gene_synonym=ECK0181;gene_synonym=JW0177;gene_synonym=pgsB;db_xref=EcoGene:EG10546 EMBL CDS 203348 204496 . + 0 ID=.379;gene=lpxB;locus_tag=b0182;gene_synonym=ECK0181;gene_synonym=JW0177;gene_synonym=pgsB;ec_number=2.4.1.182;function=enzyme%3B Macromolecule metabolism: Lipopolysaccharide;experiment=N-terminus verified by Edman degradation: PMID 3049593;note=tetraacyldisaccharide-1-P%3B lipid A biosynthesis%2C penultimate step%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0009245 - lipid A biosynthetic process;codon_start=1;transl_table=11;product=tetraacyldisaccharide-1-P synthase;protein_id=AAC73293.1;db_xref=GI:1786379;db_xref=ASAP:ABE-0000620;db_xref=UniProtKB/Swiss-Prot:P10441;db_xref=EcoGene:EG10546 EMBL gene 204493 205089 . + . ID=.380;gene=rnhB;locus_tag=b0183;gene_synonym=ECK0182;gene_synonym=JW0178;db_xref=EcoGene:EG10861 EMBL CDS 204493 205089 . + 0 ID=.381;gene=rnhB;locus_tag=b0183;gene_synonym=ECK0182;gene_synonym=JW0178;ec_number=3.1.26.4;function=enzyme%3B Degradation of RNA;experiment=N-terminus verified by Edman degradation: PMID 2172991;note=RNAse HII%2C degrades RNA of DNA-RNA hybrids%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006401 - RNA catabolic process;codon_start=1;transl_table=11;product=ribonuclease HII%2C degrades RNA of DNA-RNA hybrids;protein_id=AAC73294.1;db_xref=GI:1786380;db_xref=ASAP:ABE-0000622;db_xref=UniProtKB/Swiss-Prot:P10442;db_xref=EcoGene:EG10861 EMBL gene 205126 208608 . + . ID=.382;gene=dnaE;locus_tag=b0184;gene_synonym=ECK0183;gene_synonym=JW0179;gene_synonym=polC;gene_synonym=sdgC;db_xref=EcoGene:EG10238 EMBL CDS 205126 208608 . + 0 ID=.383;gene=dnaE;locus_tag=b0184;gene_synonym=ECK0183;gene_synonym=JW0179;gene_synonym=polC;gene_synonym=sdgC;ec_number=2.7.7.7;function=enzyme%3B DNA - replication%2C repair%2C restriction/modification;note=DNA polymerase III%2C alpha subunit%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006261 - DNA-dependent DNA replication;codon_start=1;transl_table=11;product=DNA polymerase III alpha subunit;protein_id=AAC73295.1;db_xref=GI:1786381;db_xref=ASAP:ABE-0000624;db_xref=UniProtKB/Swiss-Prot:P10443;db_xref=EcoGene:EG10238 EMBL gene 208621 209580 . + . ID=.384;gene=accA;locus_tag=b0185;gene_synonym=ECK0184;gene_synonym=JW0180;db_xref=EcoGene:EG11647 EMBL CDS 208621 209580 . + 0 ID=.385;gene=accA;locus_tag=b0185;gene_synonym=ECK0184;gene_synonym=JW0180;ec_number=6.4.1.2;function=enzyme%3B Fatty acid and phosphatidic acid biosynthesis;note=acetylCoA carboxylase%2C carboxytransferase component%2C alpha subunit%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=acetyl-CoA carboxylase%2C carboxytransferase%2C alpha subunit;protein_id=AAC73296.1;db_xref=GI:1786382;db_xref=ASAP:ABE-0000630;db_xref=UniProtKB/Swiss-Prot:P0ABD5;db_xref=EcoGene:EG11647 EMBL gene 209679 211820 . + . ID=.386;gene=ldcC;locus_tag=b0186;gene_synonym=ECK0185;gene_synonym=JW0181;gene_synonym=ldc;gene_synonym=LDC2;gene_synonym=ldcH;db_xref=EcoGene:EG13219 EMBL CDS 209679 211820 . + 0 ID=.387;gene=ldcC;locus_tag=b0186;gene_synonym=ECK0185;gene_synonym=JW0181;gene_synonym=ldc;gene_synonym=LDC2;gene_synonym=ldcH;ec_number=4.1.1.18;function=enzyme%3B Energy metabolism%2C carbon: Pyruvate dehydrogenase;experiment=N-terminus verified by Edman degradation: PMID 9226257%2C9339543;note=GO_process: GO:0006096 - glycolysis%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=lysine decarboxylase 2%2C constitutive;protein_id=AAC73297.1;db_xref=GI:1786384;db_xref=ASAP:ABE-0000633;db_xref=UniProtKB/Swiss-Prot:P52095;db_xref=EcoGene:EG13219 EMBL gene 211877 212266 . + . ID=.388;gene=yaeR;locus_tag=b0187;gene_synonym=ECK0186;gene_synonym=JW0182;db_xref=EcoGene:EG13224 EMBL CDS 211877 212266 . + 0 ID=.389;gene=yaeR;locus_tag=b0187;gene_synonym=ECK0186;gene_synonym=JW0182;codon_start=1;transl_table=11;product=putative lyase;protein_id=AAC73298.2;db_xref=GI:87081697;db_xref=ASAP:ABE-0000635;db_xref=UniProtKB/Swiss-Prot:P52096;db_xref=EcoGene:EG13224 EMBL gene 212331 213629 . + . ID=.390;gene=tilS;locus_tag=b0188;gene_synonym=ECK0187;gene_synonym=JW0183;gene_synonym=mesJ;gene_synonym=yaeN;db_xref=EcoGene:EG13220 EMBL CDS 212331 213629 . + 0 ID=.391;gene=tilS;locus_tag=b0188;gene_synonym=ECK0187;gene_synonym=JW0183;gene_synonym=mesJ;gene_synonym=yaeN;ec_number=6.1.1.5;function=enzyme%3B tRNA modification;codon_start=1;transl_table=11;product=tRNA(Ile)-lysidine synthetase;protein_id=AAC73299.1;db_xref=GI:1786386;db_xref=ASAP:ABE-0000638;db_xref=UniProtKB/Swiss-Prot:P52097;db_xref=EcoGene:EG13220 EMBL repeat_region 213632 213668 . + . ID=.392;note=REP15 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 213678 213932 . - . ID=.393;gene=rof;locus_tag=b0189;gene_synonym=ECK0188;gene_synonym=JW0184;gene_synonym=mesJ;gene_synonym=yaeO;db_xref=EcoGene:EG13221 EMBL CDS 213678 213932 . - 0 ID=.394;gene=rof;locus_tag=b0189;gene_synonym=ECK0188;gene_synonym=JW0184;gene_synonym=mesJ;gene_synonym=yaeO;experiment=N-terminus verified by Edman degradation: PMID 10739205;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=modulator of Rho-dependent transcription termination;protein_id=AAC73300.2;db_xref=GI:87081698;db_xref=ASAP:ABE-0000641;db_xref=UniProtKB/Swiss-Prot:P0AFW8;db_xref=EcoGene:EG13221 EMBL gene 213925 214125 . - . ID=.395;gene=yaeP;locus_tag=b4406;gene_synonym=ECK0189;gene_synonym=JW0185;db_xref=EcoGene:EG13222 EMBL CDS 213925 214125 . - 0 ID=.396;gene=yaeP;locus_tag=b4406;gene_synonym=ECK0189;gene_synonym=JW0185;note=conserved hypothetical protein;codon_start=1;transl_table=11;product=UPF0253 family protein;protein_id=AAT48124.1;db_xref=GI:48994876;db_xref=ASAP:ABE-0047214;db_xref=UniProtKB/Swiss-Prot:P0A8K5;db_xref=EcoGene:EG13222 EMBL gene 214291 214836 . + . ID=.397;gene=yaeQ;locus_tag=b0190;gene_synonym=ECK0190;gene_synonym=JW0186;db_xref=EcoGene:EG13223 EMBL CDS 214291 214836 . + 0 ID=.398;gene=yaeQ;locus_tag=b0190;gene_synonym=ECK0190;gene_synonym=JW0186;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=PDDEXK superfamily protein;protein_id=AAC73301.1;db_xref=GI:1786388;db_xref=ASAP:ABE-0000648;db_xref=UniProtKB/Swiss-Prot:P0AA97;db_xref=EcoGene:EG13223 EMBL gene 214833 215255 . + . ID=.399;gene=arfB;locus_tag=b0191;gene_synonym=ECK0191;gene_synonym=JW0187;gene_synonym=yaeJ;db_xref=EcoGene:EG12354 EMBL CDS 214833 215255 . + 0 ID=.400;gene=arfB;locus_tag=b0191;gene_synonym=ECK0191;gene_synonym=JW0187;gene_synonym=yaeJ;codon_start=1;transl_table=11;product=alternative stalled-ribosome rescue factor B%3B peptidyl-tRNA hydrolase%2C ribosome-attached;protein_id=AAC73302.1;db_xref=GI:1786389;db_xref=ASAP:ABE-0000650;db_xref=UniProtKB/Swiss-Prot:P40711;db_xref=EcoGene:EG12354 EMBL gene 215269 215979 . + . ID=.401;gene=nlpE;locus_tag=b0192;gene_synonym=cutF;gene_synonym=ECK0192;gene_synonym=JW0188;db_xref=EcoGene:EG12137 EMBL CDS 215269 215979 . + 0 ID=.402;gene=nlpE;locus_tag=b0192;gene_synonym=cutF;gene_synonym=ECK0192;gene_synonym=JW0188;function=putative transport%3B Detoxification;note=copper homeostasis protein (lipoprotein)%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane%3B GO_process: GO:0006805 - xenobiotic metabolic process;codon_start=1;transl_table=11;product=lipoprotein involved with copper homeostasis and adhesion;protein_id=AAC73303.1;db_xref=GI:1786390;db_xref=ASAP:ABE-0000652;db_xref=UniProtKB/Swiss-Prot:P40710;db_xref=EcoGene:EG12137 EMBL repeat_region 216027 216137 . + . ID=.403;note=RIP16 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 216179 217003 . - . ID=.404;gene=yaeF;locus_tag=b0193;gene_synonym=ECK0193;gene_synonym=JW5016;gene_synonym=yaeK;db_xref=EcoGene:EG12138 EMBL CDS 216179 217003 . - 0 ID=.405;gene=yaeF;locus_tag=b0193;gene_synonym=ECK0193;gene_synonym=JW5016;gene_synonym=yaeK;codon_start=1;transl_table=11;product=putative lipoprotein;protein_id=AAC73304.2;db_xref=GI:87081699;db_xref=ASAP:ABE-0000655;db_xref=UniProtKB/Swiss-Prot:P37056;db_xref=EcoGene:EG12138 EMBL gene 217057 218775 . - . ID=.406;gene=proS;locus_tag=b0194;gene_synonym=drpA;gene_synonym=ECK0194;gene_synonym=JW0190;db_xref=EcoGene:EG10770 EMBL CDS 217057 218775 . - 0 ID=.407;gene=proS;locus_tag=b0194;gene_synonym=drpA;gene_synonym=ECK0194;gene_synonym=JW0190;ec_number=6.1.1.15;function=enzyme%3B Aminoacyl tRNA synthetases%2C tRNA modification;experiment=N-terminus verified by Edman degradation: PMID 2203971%2C9298646;note=proline tRNA synthetase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006418 - tRNA aminoacylation for protein translation;codon_start=1;transl_table=11;product=prolyl-tRNA synthetase;protein_id=AAC73305.1;db_xref=GI:1786392;db_xref=ASAP:ABE-0000657;db_xref=UniProtKB/Swiss-Prot:P16659;db_xref=EcoGene:EG10770 EMBL gene 218887 219594 . - . ID=.408;gene=tsaA;locus_tag=b0195;gene_synonym=ECK0195;gene_synonym=JW0191;gene_synonym=yaeB;db_xref=EcoGene:EG11503 EMBL CDS 218887 219594 . - 0 ID=.409;gene=tsaA;locus_tag=b0195;gene_synonym=ECK0195;gene_synonym=JW0191;gene_synonym=yaeB;function=enzyme%3B tRNA modification;codon_start=1;transl_table=11;product=tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase%2C SAM-dependent;protein_id=AAC73306.1;db_xref=GI:1786393;db_xref=ASAP:ABE-0000661;db_xref=UniProtKB/Swiss-Prot:P28634;db_xref=EcoGene:EG11503 EMBL gene 219591 219995 . - . ID=.410;gene=rcsF;locus_tag=b0196;gene_synonym=ECK0196;gene_synonym=JW0192;db_xref=EcoGene:EG11502 EMBL CDS 219591 219995 . - 0 ID=.411;gene=rcsF;locus_tag=b0196;gene_synonym=ECK0196;gene_synonym=JW0192;function=regulator%3B Surface polysaccharides %26 antigens;note=regulator in colanic acid synthesis%3B interacts with RcsB%3B GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0009242 - colanic acid biosynthetic process;codon_start=1;transl_table=11;product=putative outer membrane protein;protein_id=AAC73307.1;db_xref=GI:1786394;db_xref=ASAP:ABE-0000663;db_xref=UniProtKB/Swiss-Prot:P69411;db_xref=EcoGene:EG11502 EMBL gene 220113 220928 . - . ID=.412;gene=metQ;locus_tag=b0197;gene_synonym=ECK0197;gene_synonym=JW0193;gene_synonym=metD;gene_synonym=yaeC;db_xref=EcoGene:EG11504 EMBL CDS 220113 220928 . - 0 ID=.413;gene=metQ;locus_tag=b0197;gene_synonym=ECK0197;gene_synonym=JW0193;gene_synonym=metD;gene_synonym=yaeC;function=transport%3B Transport of small molecules: Amino acids%2C amines;note=D-methionine transport protein (ABC superfamily%2C peri_bind)%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0042597 - periplasmic space;codon_start=1;transl_table=11;product=DL-methionine transporter subunit;protein_id=AAC73308.1;db_xref=GI:1786396;db_xref=ASAP:ABE-0000666;db_xref=UniProtKB/Swiss-Prot:P28635;db_xref=EcoGene:EG11504 EMBL gene 220968 221621 . - . ID=.414;gene=metI;locus_tag=b0198;gene_synonym=ECK0198;gene_synonym=JW0194;gene_synonym=metD;gene_synonym=yaeE;db_xref=EcoGene:EG11737 EMBL CDS 220968 221621 . - 0 ID=.415;gene=metI;locus_tag=b0198;gene_synonym=ECK0198;gene_synonym=JW0194;gene_synonym=metD;gene_synonym=yaeE;function=transport%3B Transport of small molecules: Amino acids%2C amines;note=D- and L-methionine transport protein (ABC superfamily%2C membrane)%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=DL-methionine transporter subunit;protein_id=AAC73309.1;db_xref=GI:1786397;db_xref=ASAP:ABE-0000668;db_xref=UniProtKB/Swiss-Prot:P31547;db_xref=EcoGene:EG11737 EMBL gene 221614 222645 . - . ID=.416;gene=metN;locus_tag=b0199;gene_synonym=abc;gene_synonym=ECK0199;gene_synonym=JW0195;gene_synonym=metD;db_xref=EcoGene:EG11621 EMBL CDS 221614 222645 . - 0 ID=.417;gene=metN;locus_tag=b0199;gene_synonym=abc;gene_synonym=ECK0199;gene_synonym=JW0195;gene_synonym=metD;function=transport%3B Transport of small molecules: Amino acids%2C amines;note=D- and L-methionine transport protein (ABC superfamily%2C atp_bind)%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=DL-methionine transporter subunit;protein_id=AAC73310.1;db_xref=GI:1786398;db_xref=ASAP:ABE-0000671;db_xref=UniProtKB/Swiss-Prot:P30750;db_xref=EcoGene:EG11621 EMBL gene 222833 223408 . + . ID=.418;gene=gmhB;locus_tag=b0200;gene_synonym=ECK0200;gene_synonym=gmbC;gene_synonym=gmbX;gene_synonym=gmhX;gene_synonym=JW0196;gene_synonym=wcbN;gene_synonym=yaeD;db_xref=EcoGene:EG11736 EMBL CDS 222833 223408 . + 0 ID=.419;gene=gmhB;locus_tag=b0200;gene_synonym=ECK0200;gene_synonym=gmbC;gene_synonym=gmbX;gene_synonym=gmhX;gene_synonym=JW0196;gene_synonym=wcbN;gene_synonym=yaeD;function=enzyme%3B Surface polysaccharides and antigens;codon_start=1;transl_table=11;product=D%2CD-heptose 1%2C7-bisphosphate phosphatase;protein_id=AAC73311.1;db_xref=GI:1786399;db_xref=ASAP:ABE-0000675;db_xref=UniProtKB/Swiss-Prot:P63228;db_xref=EcoGene:EG11736 EMBL gene 223771 225312 . + . ID=.420;gene=rrsH;locus_tag=b0201;gene_synonym=ECK0201;gene_synonym=JWR0001;db_xref=EcoGene:EG30090 EMBL rRNA 223771 225312 . + . ID=.421;gene=rrsH;locus_tag=b0201;gene_synonym=ECK0201;gene_synonym=JWR0001;product=16S ribosomal RNA of rrnH operon;db_xref=ASAP:ABE-0000677;db_xref=EcoGene:EG30090 EMBL gene 225381 225457 . + . ID=.422;gene=ileV;locus_tag=b0202;gene_synonym=ECK0202;gene_synonym=JWR0002;db_xref=EcoGene:EG30045 EMBL tRNA 225381 225457 . + . ID=.423;gene=ileV;locus_tag=b0202;gene_synonym=ECK0202;gene_synonym=JWR0002;product=tRNA-Ile;note=anticodon: GAU;db_xref=ASAP:ABE-0000679;db_xref=EcoGene:EG30045 EMBL gene 225500 225575 . + . ID=.424;gene=alaV;locus_tag=b0203;gene_synonym=ECK0203;gene_synonym=JWR0003;db_xref=EcoGene:EG30010 EMBL tRNA 225500 225575 . + . ID=.425;gene=alaV;locus_tag=b0203;gene_synonym=ECK0203;gene_synonym=JWR0003;product=tRNA-Ala;note=anticodon: UGC;db_xref=ASAP:ABE-0000682;db_xref=EcoGene:EG30010 EMBL gene 225759 228662 . + . ID=.426;gene=rrlH;locus_tag=b0204;gene_synonym=ECK0204;gene_synonym=JWR0004;db_xref=EcoGene:EG30083 EMBL rRNA 225759 228662 . + . ID=.427;gene=rrlH;locus_tag=b0204;gene_synonym=ECK0204;gene_synonym=JWR0004;product=23S ribosomal RNA of rrnH operon;db_xref=ASAP:ABE-0000684;db_xref=EcoGene:EG30083 EMBL gene 228756 228875 . + . ID=.428;gene=rrfH;locus_tag=b0205;gene_synonym=ECK0205;gene_synonym=JWR0005;db_xref=EcoGene:EG30076 EMBL rRNA 228756 228875 . + . ID=.429;gene=rrfH;locus_tag=b0205;gene_synonym=ECK0205;gene_synonym=JWR0005;product=5S ribosomal RNA of rrnH operon;db_xref=ASAP:ABE-0000686;db_xref=EcoGene:EG30076 EMBL gene 228928 229004 . + . ID=.430;gene=aspU;locus_tag=b0206;gene_synonym=ECK0206;gene_synonym=JWR0006;db_xref=EcoGene:EG30024 EMBL tRNA 228928 229004 . + . ID=.431;gene=aspU;locus_tag=b0206;gene_synonym=ECK0206;gene_synonym=JWR0006;product=tRNA-Asp;note=anticodon: GUC;db_xref=ASAP:ABE-0000688;db_xref=EcoGene:EG30024 EMBL gene 229167 229970 . + . ID=.432;gene=dkgB;locus_tag=b0207;gene_synonym=ECK0207;gene_synonym=JW0197;gene_synonym=yafB;db_xref=EcoGene:EG11648 EMBL CDS 229167 229970 . + 0 ID=.433;gene=dkgB;locus_tag=b0207;gene_synonym=ECK0207;gene_synonym=JW0197;gene_synonym=yafB;ec_number=1.1.1.274;function=putative enzyme%3B Not classified;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=2%2C5-diketo-D-gluconate reductase B;protein_id=AAC73312.1;db_xref=GI:1786400;db_xref=ASAP:ABE-0000692;db_xref=UniProtKB/Swiss-Prot:P30863;db_xref=EcoGene:EG11648 EMBL gene 229967 230881 . - . ID=.434;gene=yafC;locus_tag=b0208;gene_synonym=ECK0208;gene_synonym=JW0198;db_xref=EcoGene:EG11649 EMBL CDS 229967 230881 . - 0 ID=.435;gene=yafC;locus_tag=b0208;gene_synonym=ECK0208;gene_synonym=JW0198;function=putative transport%3B Not classified;note=putative transcriptional regulator LYSR-type%3B GO_function: GO:0016563 - transcription activator activity%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=LysR family putative transcriptional regulator;protein_id=AAC73313.1;db_xref=GI:1786401;db_xref=ASAP:ABE-0000694;db_xref=UniProtKB/Swiss-Prot:P30864;db_xref=EcoGene:EG11649 EMBL gene 231122 231922 . + . ID=.436;gene=yafD;locus_tag=b0209;gene_synonym=ECK0209;gene_synonym=JW5017;db_xref=EcoGene:EG11650 EMBL CDS 231122 231922 . + 0 ID=.437;gene=yafD;locus_tag=b0209;gene_synonym=ECK0209;gene_synonym=JW5017;codon_start=1;transl_table=11;product=endo/exonuclease/phosphatase family protein;protein_id=AAC73314.1;db_xref=GI:1786403;db_xref=ASAP:ABE-0000700;db_xref=UniProtKB/Swiss-Prot:P0A8U2;db_xref=EcoGene:EG11650 EMBL gene 231926 232549 . + . ID=.438;gene=yafE;locus_tag=b0210;gene_synonym=ECK0210;gene_synonym=JW0200;db_xref=EcoGene:EG11651 EMBL CDS 231926 232549 . + 0 ID=.439;gene=yafE;locus_tag=b0210;gene_synonym=ECK0210;gene_synonym=JW0200;function=putative enzyme%3B Not classified;note=putative biotin synthesis protein%3B GO_process: GO:0009102 - biotin biosynthetic process;codon_start=1;transl_table=11;product=putative S-adenosyl-L-methionine-dependent methyltransferase;protein_id=AAC73315.1;db_xref=GI:1786404;db_xref=ASAP:ABE-0000702;db_xref=UniProtKB/Swiss-Prot:P30866;db_xref=EcoGene:EG11651 EMBL gene 232597 233955 . - . ID=.440;gene=mltD;locus_tag=b0211;gene_synonym=dniR;gene_synonym=ECK0211;gene_synonym=JW5018;gene_synonym=yafG;db_xref=EcoGene:EG10246 EMBL CDS 232597 233955 . - 0 ID=.441;gene=mltD;locus_tag=b0211;gene_synonym=dniR;gene_synonym=ECK0211;gene_synonym=JW5018;gene_synonym=yafG;ec_number=3.2.1.-;function=regulator%3B Energy metabolism%2C carbon: Anaerobic respiration;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0017004 - cytochrome complex assembly%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=putative membrane-bound lytic murein transglycosylase D;protein_id=AAC73316.1;db_xref=GI:1786405;db_xref=ASAP:ABE-0000704;db_xref=UniProtKB/Swiss-Prot:P0AEZ7;db_xref=EcoGene:EG10246 EMBL gene 234027 234782 . - . ID=.442;gene=gloB;locus_tag=b0212;gene_synonym=ECK0212;gene_synonym=JW0202;gene_synonym=yafR;db_xref=EcoGene:EG13330 EMBL CDS 234027 234782 . - 0 ID=.443;gene=gloB;locus_tag=b0212;gene_synonym=ECK0212;gene_synonym=JW0202;gene_synonym=yafR;function=putative enzyme%3B Central intermediary metabolism: Pool%2C multipurpose conversions;note=probable hydroxyacylglutathione hydrolase%3B GO_process: GO:0009438 - methylglyoxal metabolic process;codon_start=1;transl_table=11;product=hydroxyacylglutathione hydrolase;protein_id=AAC73317.1;db_xref=GI:1786406;db_xref=ASAP:ABE-0000707;db_xref=UniProtKB/Swiss-Prot:P0AC84;db_xref=EcoGene:EG13330 EMBL gene 234816 235538 . + . ID=.444;gene=yafS;locus_tag=b0213;gene_synonym=ECK0213;gene_synonym=JW0203;db_xref=EcoGene:EG13331 EMBL CDS 234816 235538 . + 0 ID=.445;gene=yafS;locus_tag=b0213;gene_synonym=ECK0213;gene_synonym=JW0203;codon_start=1;transl_table=11;product=putative S-adenosyl-L-methionine-dependent methyltransferase;protein_id=AAC73318.2;db_xref=GI:87081700;db_xref=ASAP:ABE-0000713;db_xref=UniProtKB/Swiss-Prot:P75672;db_xref=EcoGene:EG13331 EMBL gene 235535 236002 . - . ID=.446;gene=rnhA;locus_tag=b0214;gene_synonym=cer;gene_synonym=dasF;gene_synonym=ECK0214;gene_synonym=herA;gene_synonym=JW0204;gene_synonym=rnh;gene_synonym=sdrA;gene_synonym=sin;db_xref=EcoGene:EG10860 EMBL CDS 235535 236002 . - 0 ID=.447;gene=rnhA;locus_tag=b0214;gene_synonym=cer;gene_synonym=dasF;gene_synonym=ECK0214;gene_synonym=herA;gene_synonym=JW0204;gene_synonym=rnh;gene_synonym=sdrA;gene_synonym=sin;ec_number=3.1.26.4;function=enzyme%3B Degradation of RNA;experiment=N-terminus verified by Edman degradation: PMID 2171503;note=RNase HI%2C degrades RNA of DNA-RNA hybrids%2C participates in DNA replication%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006401 - RNA catabolic process%3B GO_process: GO:0006261 - DNA-dependent DNA replication%3B GO_process: GO:0006508 - proteolysis;codon_start=1;transl_table=11;product=ribonuclease HI%2C degrades RNA of DNA-RNA hybrids;protein_id=AAC73319.1;db_xref=GI:1786408;db_xref=ASAP:ABE-0000717;db_xref=UniProtKB/Swiss-Prot:P0A7Y4;db_xref=EcoGene:EG10860 EMBL gene 236067 236798 . + . ID=.448;gene=dnaQ;locus_tag=b0215;gene_synonym=ECK0215;gene_synonym=JW0205;gene_synonym=mutD;db_xref=EcoGene:EG10243 EMBL CDS 236067 236798 . + 0 ID=.449;gene=dnaQ;locus_tag=b0215;gene_synonym=ECK0215;gene_synonym=JW0205;gene_synonym=mutD;ec_number=2.7.7.7;function=enzyme%3B DNA - replication%2C repair%2C restriction/modification;note=DNA polymerase III%2C epsilon subunit%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006261 - DNA-dependent DNA replication%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=DNA polymerase III epsilon subunit;protein_id=AAC73320.1;db_xref=GI:1786409;db_xref=ASAP:ABE-0000722;db_xref=UniProtKB/Swiss-Prot:P03007;db_xref=EcoGene:EG10243 EMBL gene 236931 237007 . + . ID=.450;gene=aspV;locus_tag=b0216;gene_synonym=ECK0216;gene_synonym=JWR0007;db_xref=EcoGene:EG30025 EMBL tRNA 236931 237007 . + . ID=.451;gene=aspV;locus_tag=b0216;gene_synonym=ECK0216;gene_synonym=JWR0007;product=tRNA-Asp;note=anticodon: GUC;db_xref=ASAP:ABE-0000724;db_xref=EcoGene:EG30025 EMBL gene 237335 238120 . + . ID=.452;gene=yafT;locus_tag=b0217;gene_synonym=ECK0217;gene_synonym=JW0206;db_xref=EcoGene:EG13332 EMBL CDS 237335 238120 . + 0 ID=.453;gene=yafT;locus_tag=b0217;gene_synonym=ECK0217;gene_synonym=JW0206;function=putative enzyme%3B Not classified;note=putative aminopeptidase;codon_start=1;transl_table=11;product=lipoprotein;protein_id=AAC73321.1;db_xref=GI:1786410;db_xref=ASAP:ABE-0000727;db_xref=UniProtKB/Swiss-Prot:P77339;db_xref=EcoGene:EG13332 EMBL gene 238257 238736 . - . ID=.454;gene=ykfM;locus_tag=b4586;gene_synonym=ECK4397;db_xref=EcoGene:EG14451 EMBL CDS 238257 238736 . - 0 ID=.455;gene=ykfM;locus_tag=b4586;gene_synonym=ECK4397;codon_start=1;transl_table=11;product=lethality reduction protein%2C putative inner membrane protein;protein_id=ABP93434.1;db_xref=GI:145693093;db_xref=UniProtKB/Swiss-Prot:A5A605;db_xref=EcoGene:EG14451 EMBL gene 238746 239102 . - . ID=.456;gene=yafU;locus_tag=b0218;gene_synonym=ECK0218;gene_synonym=JW0207;pseudo=true;db_xref=EcoGene:EG13333 EMBL CDS 238746 239102 . - 0 ID=.457;gene=yafU;locus_tag=b0218;gene_synonym=ECK0218;gene_synonym=JW0207;note=pseudogene;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0000729;db_xref=UniProtKB/Swiss-Prot:P77354;db_xref=EcoGene:EG13333 EMBL gene 239106 239378 . + . ID=.458;gene=yafF;locus_tag=b4503;gene_synonym=ECK0219;gene_synonym=JW0208;pseudo=true;db_xref=EcoGene:EG11772 EMBL CDS 239106 239378 . + 0 ID=.459;gene=yafF;locus_tag=b4503;gene_synonym=ECK0219;gene_synonym=JW0208;note=pseudogene%2C H repeat-associated protein%3B GO_component: GO:0005737 - cytoplasm;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0285024;db_xref=UniProtKB/Swiss-Prot:Q2EEP9;db_xref=EcoGene:EG11772 EMBL gene 239419 240189 . - . ID=.460;gene=yafV;locus_tag=b0219;gene_synonym=ECK0220;gene_synonym=JW5019;db_xref=EcoGene:EG13334 EMBL CDS 239419 240189 . - 0 ID=.461;gene=yafV;locus_tag=b0219;gene_synonym=ECK0220;gene_synonym=JW5019;function=putative enzyme%3B Not classified;note=putative EC 3.5. amidase-type enzyme;codon_start=1;transl_table=11;product=putative NAD(P)-binding C-N hydrolase family amidase;protein_id=AAC73323.1;db_xref=GI:1786412;db_xref=ASAP:ABE-0000734;db_xref=UniProtKB/Swiss-Prot:Q47679;db_xref=EcoGene:EG13334 EMBL gene 240343 240816 . + . ID=.462;gene=ivy;locus_tag=b0220;gene_synonym=ECK0221;gene_synonym=JW0210;gene_synonym=ykfE;db_xref=EcoGene:EG13547 EMBL CDS 240343 240816 . + 0 ID=.463;gene=ivy;locus_tag=b0220;gene_synonym=ECK0221;gene_synonym=JW0210;gene_synonym=ykfE;note=inhibitor of vertebrate C-type lysozyme%2C periplasmic;codon_start=1;transl_table=11;product=inhibitor of c-type lysozyme%2C periplasmic;protein_id=AAC73324.1;db_xref=GI:1786413;db_xref=ASAP:ABE-0000740;db_xref=UniProtKB/Swiss-Prot:P0AD59;db_xref=EcoGene:EG13547 EMBL gene 240859 243303 . - . ID=.464;gene=fadE;locus_tag=b0221;gene_synonym=ECK0222;gene_synonym=fadF;gene_synonym=JW5020;gene_synonym=yafH;db_xref=EcoGene:EG13145 EMBL CDS 240859 243303 . - 0 ID=.465;gene=fadE;locus_tag=b0221;gene_synonym=ECK0222;gene_synonym=fadF;gene_synonym=JW5020;gene_synonym=yafH;ec_number=1.3.99.-;function=putative enzyme%3B Not classified;note=GO_process: GO:0019395 - fatty acid oxidation;codon_start=1;transl_table=11;product=acyl coenzyme A dehydrogenase;protein_id=AAC73325.2;db_xref=GI:87081702;db_xref=ASAP:ABE-0000743;db_xref=UniProtKB/Swiss-Prot:Q47146;db_xref=EcoGene:EG13145 EMBL gene 243543 244121 . + . ID=.466;gene=gmhA;locus_tag=b0222;gene_synonym=ECK0223;gene_synonym=isn;gene_synonym=JW0212;gene_synonym=lpcA;gene_synonym=tfrA;gene_synonym=yafI;db_xref=EcoGene:EG13146 EMBL CDS 243543 244121 . + 0 ID=.467;gene=gmhA;locus_tag=b0222;gene_synonym=ECK0223;gene_synonym=isn;gene_synonym=JW0212;gene_synonym=lpcA;gene_synonym=tfrA;gene_synonym=yafI;ec_number=5.-.-.-;function=enzyme%3B Surface polysaccharides %26 antigens;note=phosphoheptose isomerase%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0009244 - lipopolysaccharide core region biosynthetic process;codon_start=1;transl_table=11;product=D-sedoheptulose 7-phosphate isomerase;protein_id=AAC73326.1;db_xref=GI:1786416;db_xref=ASAP:ABE-0000751;db_xref=UniProtKB/Swiss-Prot:P63224;db_xref=EcoGene:EG13146 EMBL repeat_region 244129 244263 . + . ID=.468;note=REP17 (repetitive extragenic palindromic) element%3B contains 3 REP sequences EMBL gene 244327 245094 . + . ID=.469;gene=yafJ;locus_tag=b0223;gene_synonym=ECK0224;gene_synonym=JW0213;db_xref=EcoGene:EG13147 EMBL CDS 244327 245094 . + 0 ID=.470;gene=yafJ;locus_tag=b0223;gene_synonym=ECK0224;gene_synonym=JW0213;function=putative enzyme%3B Not classified;note=putative amidotransferase;codon_start=1;transl_table=11;product=type 2 glutamine amidotransferase family protein;protein_id=AAC73327.1;db_xref=GI:1786417;db_xref=ASAP:ABE-0000755;db_xref=UniProtKB/Swiss-Prot:Q47147;db_xref=EcoGene:EG13147 EMBL gene 245065 245805 . - . ID=.471;gene=yafK;locus_tag=b0224;gene_synonym=ECK0225;gene_synonym=JW0214;db_xref=EcoGene:EG13148 EMBL CDS 245065 245805 . - 0 ID=.472;gene=yafK;locus_tag=b0224;gene_synonym=ECK0225;gene_synonym=JW0214;codon_start=1;transl_table=11;product=L%2CD-transpeptidase-related protein;protein_id=AAC73328.1;db_xref=GI:1786418;db_xref=ASAP:ABE-0000757;db_xref=UniProtKB/Swiss-Prot:P0AA99;db_xref=EcoGene:EG13148 EMBL gene 245961 246239 . - . ID=.473;gene=yafQ;locus_tag=b0225;gene_synonym=ECK0226;gene_synonym=JW0215;db_xref=EcoGene:EG13154 EMBL CDS 245961 246239 . - 0 ID=.474;gene=yafQ;locus_tag=b0225;gene_synonym=ECK0226;gene_synonym=JW0215;codon_start=1;transl_table=11;product=mRNA interferase toxin of toxin-antitoxin pair YafQ/DinJ;protein_id=AAC73329.1;db_xref=GI:1786419;db_xref=ASAP:ABE-0000761;db_xref=UniProtKB/Swiss-Prot:Q47149;db_xref=EcoGene:EG13154 EMBL gene 246242 246502 . - . ID=.475;gene=dinJ;locus_tag=b0226;gene_synonym=ECK0227;gene_synonym=JW0216;gene_synonym=sosA;db_xref=EcoGene:EG13142 EMBL CDS 246242 246502 . - 0 ID=.476;gene=dinJ;locus_tag=b0226;gene_synonym=ECK0227;gene_synonym=JW0216;gene_synonym=sosA;function=phenotype%3B Not classified;note=damage-inducible protein J%3B GO_process: GO:0006281 - DNA repair;codon_start=1;transl_table=11;product=antitoxin of YafQ-DinJ toxin-antitoxin system;protein_id=AAC73330.1;db_xref=GI:1786420;db_xref=ASAP:ABE-0000764;db_xref=UniProtKB/Swiss-Prot:Q47150;db_xref=EcoGene:EG13142 EMBL gene 246712 247461 . + . ID=.477;gene=yafL;locus_tag=b0227;gene_synonym=ECK0228;gene_synonym=JW0217;db_xref=EcoGene:EG13149 EMBL CDS 246712 247461 . + 0 ID=.478;gene=yafL;locus_tag=b0227;gene_synonym=ECK0228;gene_synonym=JW0217;function=putative membrane%3B Not classified;note=putative lipoprotein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=putative lipoprotein and C40 family peptidase;protein_id=AAC73331.1;db_xref=GI:1786421;db_xref=ASAP:ABE-0000775;db_xref=UniProtKB/Swiss-Prot:Q47151;db_xref=EcoGene:EG13149 EMBL repeat_region 247458 247541 . + . ID=.479;note=REP18 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 247637 248134 . + . ID=.480;gene=rayT;locus_tag=b0228;gene_synonym=ECK0229;gene_synonym=JW0218;gene_synonym=tnpAREP;gene_synonym=yafM;db_xref=EcoGene:EG13150 EMBL CDS 247637 248134 . + 0 ID=.481;gene=rayT;locus_tag=b0228;gene_synonym=ECK0229;gene_synonym=JW0218;gene_synonym=tnpAREP;gene_synonym=yafM;codon_start=1;transl_table=11;product=RAYT REP element-mobilizing transposase%3B TnpA(REP);protein_id=AAC73332.1;db_xref=GI:1786422;db_xref=ASAP:ABE-0000779;db_xref=UniProtKB/Swiss-Prot:Q47152;db_xref=EcoGene:EG13150 EMBL repeat_region 248147 248334 . + . ID=.482;note=REP19 (repetitive extragenic palindromic) element%3B contains 4 REP sequences EMBL gene 248358 250070 . - . ID=.483;gene=lfhA;locus_tag=b0229;gene_synonym=ECK0230;gene_synonym=fhiA;gene_synonym=JW5811;pseudo=true;db_xref=EcoGene:EG13144 EMBL CDS 248358 250070 . - 0 ID=.484;gene=lfhA;locus_tag=b0229;gene_synonym=ECK0230;gene_synonym=fhiA;gene_synonym=JW5811;note=pseudogene%2C flagellar system protein%2C promoterless fragment%3B flagellar biosynthesis%3B GO_component: GO:0019861 - flagellum%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0000782;db_xref=UniProtKB/Swiss-Prot:Q47153;db_xref=EcoGene:EG13144 EMBL gene 250072 250827 . + . ID=.485;gene=lafU;locus_tag=b0230;gene_synonym=ECK0231;gene_synonym=JW5812;gene_synonym=mbhA;pseudo=true;db_xref=EcoGene:EG13143 EMBL CDS 250072 250827 . + 0 ID=.486;gene=lafU;locus_tag=b0230;gene_synonym=ECK0231;gene_synonym=JW5812;gene_synonym=mbhA;note=pseudogene%2C lateral flagellar motor protein fragment%3B GO_process: GO:0042330 - taxis;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0000785;db_xref=UniProtKB/Swiss-Prot:Q47154;db_xref=EcoGene:EG13143 EMBL gene 250898 251953 . + . ID=.487;gene=dinB;locus_tag=b0231;gene_synonym=dinP;gene_synonym=ECK0232;gene_synonym=JW0221;db_xref=EcoGene:EG13141 EMBL CDS 250898 251953 . + 0 ID=.488;gene=dinB;locus_tag=b0231;gene_synonym=dinP;gene_synonym=ECK0232;gene_synonym=JW0221;ec_number=2.7.7.7;note=DNA polymerase IV%3B DNA polymerase IV%2C devoid of proofreading%2C damage-inducible protein P%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006261 - DNA-dependent DNA replication%3B GO_process: GO:0009432 - SOS response;codon_start=1;transl_table=11;product=DNA polymerase IV;protein_id=AAC73335.1;db_xref=GI:1786425;db_xref=ASAP:ABE-0000789;db_xref=UniProtKB/Swiss-Prot:Q47155;db_xref=EcoGene:EG13141 EMBL gene 252005 252298 . + . ID=.489;gene=yafN;locus_tag=b0232;gene_synonym=ECK0233;gene_synonym=JW0222;db_xref=EcoGene:EG13151 EMBL CDS 252005 252298 . + 0 ID=.490;gene=yafN;locus_tag=b0232;gene_synonym=ECK0233;gene_synonym=JW0222;codon_start=1;transl_table=11;product=antitoxin of the YafO-YafN toxin-antitoxin system;protein_id=AAC73336.1;db_xref=GI:1786426;db_xref=ASAP:ABE-0000793;db_xref=UniProtKB/Swiss-Prot:Q47156;db_xref=EcoGene:EG13151 EMBL gene 252301 252699 . + . ID=.491;gene=yafO;locus_tag=b0233;gene_synonym=ECK0234;gene_synonym=JW0223;db_xref=EcoGene:EG13152 EMBL CDS 252301 252699 . + 0 ID=.492;gene=yafO;locus_tag=b0233;gene_synonym=ECK0234;gene_synonym=JW0223;codon_start=1;transl_table=11;product=mRNA interferase toxin of the YafO-YafN toxin-antitoxin system;protein_id=AAC73337.1;db_xref=GI:1786427;db_xref=ASAP:ABE-0000795;db_xref=UniProtKB/Swiss-Prot:Q47157;db_xref=EcoGene:EG13152 EMBL gene 252709 253161 . + . ID=.493;gene=yafP;locus_tag=b0234;gene_synonym=ECK0235;gene_synonym=JW0224;db_xref=EcoGene:EG13153 EMBL CDS 252709 253161 . + 0 ID=.494;gene=yafP;locus_tag=b0234;gene_synonym=ECK0235;gene_synonym=JW0224;codon_start=1;transl_table=11;product=GNAT family putative N-acetyltransferase;protein_id=AAC73338.1;db_xref=GI:1786428;db_xref=ASAP:ABE-0000801;db_xref=UniProtKB/Swiss-Prot:Q47158;db_xref=EcoGene:EG13153 EMBL gene 253479 253685 . + . ID=.495;gene=ykfJ;locus_tag=b0235;gene_synonym=ECK0236;gene_synonym=JW0225;pseudo=true;db_xref=EcoGene:EG14368 EMBL CDS 253479 253685 . + 0 ID=.496;gene=ykfJ;locus_tag=b0235;gene_synonym=ECK0236;gene_synonym=JW0225;note=pseudogene;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0000805;db_xref=UniProtKB/Swiss-Prot:P75675;db_xref=EcoGene:EG14368 EMBL gene 253702 254202 . + . ID=.497;gene=prfH;locus_tag=b0236;gene_synonym=ECK0237;gene_synonym=JW0226;pseudo=true;db_xref=EcoGene:EG11496 EMBL CDS 253702 254202 . + 0 ID=.498;gene=prfH;locus_tag=b0236;gene_synonym=ECK0237;gene_synonym=JW0226;note=pseudogene%2C RF-1 domain family%3B probable peptide chain release factor%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006412 - translation;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0000807;db_xref=UniProtKB/Swiss-Prot:P28369;db_xref=EcoGene:EG11496 EMBL repeat_region 254217 254244 . + . ID=.499;note=REP20 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 254259 255716 . - . ID=.500;gene=pepD;locus_tag=b0237;gene_synonym=ECK0238;gene_synonym=JW0227;gene_synonym=pepH;db_xref=EcoGene:EG10695 EMBL CDS 254259 255716 . - 0 ID=.501;gene=pepD;locus_tag=b0237;gene_synonym=ECK0238;gene_synonym=JW0227;gene_synonym=pepH;ec_number=3.4.13.18;function=enzyme%3B Degradation of proteins%2C peptides%2C glyco;note=GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=aminoacyl-histidine dipeptidase (peptidase D);protein_id=AAC73341.1;db_xref=GI:1786432;db_xref=ASAP:ABE-0000809;db_xref=UniProtKB/Swiss-Prot:P15288;db_xref=EcoGene:EG10695 EMBL gene 255977 256435 . + . ID=.502;gene=gpt;locus_tag=b0238;gene_synonym=ECK0239;gene_synonym=gpp;gene_synonym=gxu;gene_synonym=JW0228;db_xref=EcoGene:EG10414 EMBL CDS 255977 256435 . + 0 ID=.503;gene=gpt;locus_tag=b0238;gene_synonym=ECK0239;gene_synonym=gpp;gene_synonym=gxu;gene_synonym=JW0228;ec_number=2.4.2.22;function=enzyme%3B Salvage of nucleosides and nucleotides;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion;codon_start=1;transl_table=11;product=xanthine phosphoribosyltransferase%3B xanthine-guanine phosphoribosyltransferase;protein_id=AAC73342.1;db_xref=GI:1786433;db_xref=ASAP:ABE-0000814;db_xref=UniProtKB/Swiss-Prot:P0A9M5;db_xref=EcoGene:EG10414 EMBL gene 256527 257771 . + . ID=.504;gene=frsA;locus_tag=b0239;gene_synonym=ECK0240;gene_synonym=JW0229;gene_synonym=yafA;db_xref=EcoGene:EG11091 EMBL CDS 256527 257771 . + 0 ID=.505;gene=frsA;locus_tag=b0239;gene_synonym=ECK0240;gene_synonym=JW0229;gene_synonym=yafA;codon_start=1;transl_table=11;product=fermentation-respiration switch protein%3B PTS Enzyme IIA(Glc)-binding protein%3B pNP-butyrate esterase activity;protein_id=AAC73343.1;db_xref=GI:1786434;db_xref=ASAP:ABE-0000817;db_xref=UniProtKB/Swiss-Prot:P04335;db_xref=EcoGene:EG11091 EMBL biological_region 257829 259006 . + . ID=.506;featflags=type:gene;gene=crl;locus_tag=b0240;gene_synonym=ECK0241;gene_synonym=JW0230;pseudo=true;db_xref=EcoGene:EG11092 EMBL gene 257829 257899 . + . Parent=.506 EMBL gene 258676 259006 . + . Parent=.506 EMBL biological_region 257829 259006 . + 0 ID=.509;featflags=type:CDS;gene=crl;locus_tag=b0240;gene_synonym=ECK0241;gene_synonym=JW0230;note=pseudogene%2C sigma factor-binding protein%2C RNA polymerase holoenzyme formation stimulator%3Bregulator%3B Surface structures%3B transcriptional regulator of cryptic csgA gene for curli surface fibers%3B GO_component: GO:0009289 - pilus%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0006350 - transcription;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0000821;db_xref=UniProtKB/Swiss-Prot:P24251;db_xref=EcoGene:EG11092 EMBL CDS 257829 257899 . + 0 Parent=.509 EMBL CDS 258676 259006 . + 0 Parent=.509 EMBL sequence_feature 257908 258675 . - . ID=.512;note=*mobile_element_type: insertion sequence:IS1I EMBL repeat_region 259016 259036 . + . ID=.513;note=REP21 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 259045 260100 . - . ID=.514;gene=phoE;locus_tag=b0241;gene_synonym=ECK0242;gene_synonym=JW0231;gene_synonym=ompE;db_xref=EcoGene:EG10729 EMBL CDS 259045 260100 . - 0 ID=.515;gene=phoE;locus_tag=b0241;gene_synonym=ECK0242;gene_synonym=JW0231;gene_synonym=ompE;function=membrane%3B Outer membrane constituents;note=outer membrane pore protein E (E%2CIc%2CNmpAB)%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane;codon_start=1;transl_table=11;product=outer membrane phosphoporin protein E;protein_id=AAC73345.1;db_xref=GI:1786436;db_xref=ASAP:ABE-0000823;db_xref=UniProtKB/Swiss-Prot:P02932;db_xref=EcoGene:EG10729 EMBL gene 260388 261491 . + . ID=.516;gene=proB;locus_tag=b0242;gene_synonym=ECK0243;gene_synonym=JW0232;gene_synonym=pro;db_xref=EcoGene:EG10768 EMBL CDS 260388 261491 . + 0 ID=.517;gene=proB;locus_tag=b0242;gene_synonym=ECK0243;gene_synonym=JW0232;gene_synonym=pro;ec_number=2.7.2.11;function=enzyme%3B Amino acid biosynthesis: Proline;experiment=N-terminus verified by Edman degradation: PMID 6089111;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006561 - proline biosynthetic process;codon_start=1;transl_table=11;product=gamma-glutamate kinase;protein_id=AAC73346.1;db_xref=GI:1786437;db_xref=ASAP:ABE-0000830;db_xref=UniProtKB/Swiss-Prot:P0A7B5;db_xref=EcoGene:EG10768 EMBL gene 261503 262756 . + . ID=.518;gene=proA;locus_tag=b0243;gene_synonym=ECK0244;gene_synonym=JW0233;gene_synonym=pro;db_xref=EcoGene:EG10767 EMBL CDS 261503 262756 . + 0 ID=.519;gene=proA;locus_tag=b0243;gene_synonym=ECK0244;gene_synonym=JW0233;gene_synonym=pro;ec_number=1.2.1.41;function=enzyme%3B Amino acid biosynthesis: Proline;experiment=N-terminus verified by Edman degradation: PMID 6089111;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006561 - proline biosynthetic process;codon_start=1;transl_table=11;product=gamma-glutamylphosphate reductase;protein_id=AAC73347.1;db_xref=GI:1786438;db_xref=ASAP:ABE-0000832;db_xref=UniProtKB/Swiss-Prot:P07004;db_xref=EcoGene:EG10767 EMBL gene 262871 262946 . + . ID=.520;gene=thrW;locus_tag=b0244;gene_synonym=ECK0245;gene_synonym=JWR0008;db_xref=EcoGene:EG30104 EMBL tRNA 262871 262946 . + . ID=.521;gene=thrW;locus_tag=b0244;gene_synonym=ECK0245;gene_synonym=JWR0008;product=tRNA-Thr;note=anticodon: CGU;db_xref=ASAP:ABE-0000834;db_xref=EcoGene:EG30104 EMBL sequence_feature 262958 297265 . + . ID=.522;note=cryptic prophage CP4-6 EMBL gene 263150 263212 . - . ID=.523;gene=ykfN;locus_tag=b4626;gene_synonym=ECK4458;pseudo=true;db_xref=EcoGene:EG14454 EMBL CDS 263150 263212 . - 0 ID=.524;gene=ykfN;locus_tag=b4626;gene_synonym=ECK4458;note=pseudogene%2C YdiA family;pseudo=true;codon_start=1;transl_table=11;db_xref=EcoGene:EG14454 EMBL gene 263328 263669 . - . ID=.525;gene=ykfI;locus_tag=b0245;gene_synonym=ECK0246;gene_synonym=JW0234;db_xref=EcoGene:EG14333 EMBL CDS 263328 263669 . - 0 ID=.526;gene=ykfI;locus_tag=b0245;gene_synonym=ECK0246;gene_synonym=JW0234;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=CP4-6 prophage%3B toxin of the YkfI-YafW toxin-antitoxin system;protein_id=AAC73348.1;db_xref=GI:1786439;db_xref=ASAP:ABE-0000836;db_xref=UniProtKB/Swiss-Prot:P77692;db_xref=EcoGene:EG14333 EMBL gene 263690 264007 . - . ID=.527;gene=yafW;locus_tag=b0246;gene_synonym=ECK0247;gene_synonym=JW0235;db_xref=EcoGene:EG13335 EMBL CDS 263690 264007 . - 0 ID=.528;gene=yafW;locus_tag=b0246;gene_synonym=ECK0247;gene_synonym=JW0235;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=CP4-6 prophage%3B antitoxin of the YkfI-YafW toxin-antitoxin system;protein_id=AAC73349.1;db_xref=GI:1786440;db_xref=ASAP:ABE-0000838;db_xref=UniProtKB/Swiss-Prot:Q47684;db_xref=EcoGene:EG13335 EMBL gene 264026 264247 . - . ID=.529;gene=ykfH;locus_tag=b4504;gene_synonym=ECK0248;gene_synonym=JW5956;db_xref=EcoGene:EG14332 EMBL CDS 264026 264247 . - 0 ID=.530;gene=ykfH;locus_tag=b4504;gene_synonym=ECK0248;gene_synonym=JW5956;note=GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=ABD18634.1;db_xref=GI:87081704;db_xref=ASAP:ABE-0285025;db_xref=UniProtKB/Swiss-Prot:Q9XB42;db_xref=EcoGene:EG14332 EMBL gene 264256 264732 . - . ID=.531;gene=ykfG;locus_tag=b0247;gene_synonym=ECK0249;gene_synonym=JW0236;db_xref=EcoGene:EG14331 EMBL CDS 264256 264732 . - 0 ID=.532;gene=ykfG;locus_tag=b0247;gene_synonym=ECK0249;gene_synonym=JW0236;function=Phage or Prophage Related;note=putative DNA repair protein;codon_start=1;transl_table=11;product=CP4-6 prophage%3B RadC-like JAB domain protein;protein_id=AAC73350.1;db_xref=GI:2367100;db_xref=ASAP:ABE-0000841;db_xref=UniProtKB/Swiss-Prot:Q47685;db_xref=EcoGene:EG14331 EMBL gene 264748 265206 . - . ID=.533;gene=yafX;locus_tag=b0248;gene_synonym=ECK0250;gene_synonym=JW5022;db_xref=EcoGene:EG13336 EMBL CDS 264748 265206 . - 0 ID=.534;gene=yafX;locus_tag=b0248;gene_synonym=ECK0250;gene_synonym=JW5022;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=CP4-6 prophage%3B uncharacterized protein;protein_id=AAC73351.1;db_xref=GI:1786442;db_xref=ASAP:ABE-0000843;db_xref=UniProtKB/Swiss-Prot:P75676;db_xref=EcoGene:EG13336 EMBL gene 265304 265543 . - . ID=.535;gene=ykfF;locus_tag=b0249;gene_synonym=ECK0251;gene_synonym=JW5023;db_xref=EcoGene:EG14283 EMBL CDS 265304 265543 . - 0 ID=.536;gene=ykfF;locus_tag=b0249;gene_synonym=ECK0251;gene_synonym=JW5023;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=CP4-6 prophage%3B uncharacterized protein;protein_id=AAC73352.1;db_xref=GI:1786443;db_xref=ASAP:ABE-0000846;db_xref=UniProtKB/Swiss-Prot:P75677;db_xref=EcoGene:EG14283 EMBL gene 265620 266087 . - . ID=.537;gene=ykfB;locus_tag=b0250;gene_synonym=ECK0252;gene_synonym=JW0239;db_xref=EcoGene:EG13548 EMBL CDS 265620 266087 . - 0 ID=.538;gene=ykfB;locus_tag=b0250;gene_synonym=ECK0252;gene_synonym=JW0239;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=CP4-6 prophage%3B uncharacterized protein;protein_id=AAC73353.1;db_xref=GI:1786444;db_xref=ASAP:ABE-0000851;db_xref=UniProtKB/Swiss-Prot:P77162;db_xref=EcoGene:EG13548 EMBL gene 266110 266553 . - . ID=.539;gene=yafY;locus_tag=b0251;gene_synonym=ECK0253;gene_synonym=JW0240;db_xref=EcoGene:EG13337 EMBL CDS 266110 266553 . - 0 ID=.540;gene=yafY;locus_tag=b0251;gene_synonym=ECK0253;gene_synonym=JW0240;function=Phage or Prophage Related;note=hypothetical transcriptional regulator;codon_start=1;transl_table=11;product=lipoprotein%2C inner membrane%3B degP regulator%3B CP4-6 prophage;protein_id=AAC73354.2;db_xref=GI:145693094;db_xref=ASAP:ABE-0000853;db_xref=UniProtKB/Swiss-Prot:P77365;db_xref=EcoGene:EG13337 EMBL gene 266553 266774 . - . ID=.541;gene=ykfL;locus_tag=b4627;gene_synonym=ECK4445;pseudo=true;db_xref=EcoGene:EG14378 EMBL CDS 266553 266774 . - 0 ID=.542;gene=ykfL;locus_tag=b4627;gene_synonym=ECK4445;note=pseudogene%2C CP4-6 putative prophage remnant%3BPhage or Prophage Related;pseudo=true;codon_start=1;transl_table=11;db_xref=EcoGene:EG14378 EMBL gene 266776 266967 . - . ID=.543;gene=ykfK;locus_tag=b4628;gene_synonym=ECK4444;gene_synonym=yafY;pseudo=true;db_xref=EcoGene:EG14377 EMBL CDS 266776 266967 . - 0 ID=.544;gene=ykfK;locus_tag=b4628;gene_synonym=ECK4444;gene_synonym=yafY;note=CP4-6 prophage%3B putative DNA-binding transcriptional regulator%3BPhage or Prophage Related;pseudo=true;codon_start=1;transl_table=11;db_xref=EcoGene:EG14377 EMBL gene 267184 268005 . - . ID=.545;gene=yafZ;locus_tag=b0252;gene_synonym=ECK0254;gene_synonym=JW0242;db_xref=EcoGene:EG13338 EMBL CDS 267184 268005 . - 0 ID=.546;gene=yafZ;locus_tag=b0252;gene_synonym=ECK0254;gene_synonym=JW0242;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=CP4-6 prophage%3B conserved protein;protein_id=AAC73355.2;db_xref=GI:87081705;db_xref=ASAP:ABE-0000856;db_xref=UniProtKB/Swiss-Prot:P77206;db_xref=EcoGene:EG13338 EMBL gene 268097 268960 . - . ID=.547;gene=ykfA;locus_tag=b0253;gene_synonym=ECK0255;gene_synonym=JW0243;db_xref=EcoGene:EG13339 EMBL CDS 268097 268960 . - 0 ID=.548;gene=ykfA;locus_tag=b0253;gene_synonym=ECK0255;gene_synonym=JW0243;function=Phage or Prophage Related;note=putative GTP-binding protein;codon_start=1;transl_table=11;product=CP4-6 prophage%3B putative GTP-binding protein;protein_id=AAC73356.2;db_xref=GI:87081706;db_xref=ASAP:ABE-0000858;db_xref=UniProtKB/Swiss-Prot:P75678;db_xref=EcoGene:EG13339 EMBL gene 269289 270182 . - . ID=.549;gene=perR;locus_tag=b0254;gene_synonym=ECK0256;gene_synonym=JW0244;db_xref=EcoGene:EG13340 EMBL CDS 269289 270182 . - 0 ID=.550;gene=perR;locus_tag=b0254;gene_synonym=ECK0256;gene_synonym=JW0244;function=Phage or Prophage Related;note=peroxide resistance protein;codon_start=1;transl_table=11;product=CP4-6 prophage%3B putative DNA-binding transcriptional regulator;protein_id=AAC73357.1;db_xref=GI:1786448;db_xref=ASAP:ABE-0000862;db_xref=UniProtKB/Swiss-Prot:Q57083;db_xref=EcoGene:EG13340 EMBL sequence_feature 270206 270540 . + . ID=.551;note=*mobile_element_type: insertion sequence:IS911A EMBL biological_region 270278 272189 . + . ID=.552;featflags=type:gene;gene=insN;locus_tag=b4587;gene_synonym=ECK0257;gene_synonym=insN1;gene_synonym=insO;gene_synonym=ORFAB;pseudo=true;db_xref=EcoGene:EG40014 EMBL gene 270278 270535 . + . Parent=.552 EMBL gene 271764 272189 . + . Parent=.552 EMBL biological_region 270278 272189 . + 0 ID=.555;featflags=type:CDS;gene=insN;locus_tag=b4587;gene_synonym=ECK0257;gene_synonym=insN1;gene_synonym=insO;gene_synonym=ORFAB;experiment=N-terminus verified by Edman degradation: PMID 1660923;note=pseudogene%2C IS911 transposase A%3BIS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0000867;db_xref=UniProtKB/Swiss-Prot:P75679;db_xref=EcoGene:EG40014 EMBL CDS 270278 270535 . + 0 Parent=.555 EMBL CDS 271764 272189 . + 0 Parent=.555 EMBL sequence_feature 270541 271761 . + . ID=.558;note=*mobile_element_type: insertion sequence:IS30A EMBL gene 270603 271754 . + . ID=.559;gene=insI1;locus_tag=b0256;gene_synonym=ECK0258;db_xref=EcoGene:EG40009 EMBL CDS 270603 271754 . + 0 ID=.560;gene=insI1;locus_tag=b0256;gene_synonym=ECK0258;function=IS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;codon_start=1;transl_table=11;product=IS30 transposase;protein_id=AAC73359.1;db_xref=GI:1786450;db_xref=ASAP:ABE-0000871;db_xref=UniProtKB/Swiss-Prot:P0CF88;db_xref=EcoGene:EG40009 EMBL sequence_feature 271762 272190 . + . ID=.561;note=*mobile_element_type: insertion sequence:IS911A EMBL gene 272580 272654 . + . ID=.562;gene=eyeA;locus_tag=b4690;gene_synonym=ECK4506;gene_synonym=I001;db_xref=EcoGene:EG31183 EMBL ncRNA 272580 272654 . + . ID=.563;ncrna_class=other;gene=eyeA;locus_tag=b4690;gene_synonym=ECK4506;gene_synonym=I001;product=novel sRNA%2C function unknown%2C CP4-6 propahge;db_xref=EcoGene:EG31183 EMBL gene 272847 273954 . + . ID=.564;gene=ykfC;locus_tag=b0258;gene_synonym=ECK0260;gene_synonym=JW5813;pseudo=true;db_xref=EcoGene:EG13341 EMBL CDS 272847 273954 . + 0 ID=.565;gene=ykfC;locus_tag=b0258;gene_synonym=ECK0260;gene_synonym=JW5813;note=CP4-6 prophage%3B conserved protein%3BPhage or Prophage Related;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0000885;db_xref=UniProtKB/Swiss-Prot:Q47688;db_xref=EcoGene:EG13341 EMBL sequence_feature 273955 275149 . - . ID=.566;note=*mobile_element_type: insertion sequence:IS5A EMBL gene 274101 275117 . - . ID=.567;gene=insH1;locus_tag=b0259;gene_synonym=ECK0261;db_xref=EcoGene:EG40008 EMBL CDS 274101 275117 . - 0 ID=.568;gene=insH1;locus_tag=b0259;gene_synonym=ECK0261;function=IS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;codon_start=1;transl_table=11;product=IS5 transposase and trans-activator;protein_id=AAC73362.1;db_xref=GI:1786453;db_xref=ASAP:ABE-0000888;db_xref=UniProtKB/Swiss-Prot:P0CE49;db_xref=EcoGene:EG40008 EMBL gene 275325 276728 . + . ID=.569;gene=mmuP;locus_tag=b0260;gene_synonym=ECK0262;gene_synonym=JW5027;gene_synonym=ykfD;db_xref=EcoGene:EG13342 EMBL CDS 275325 276728 . + 0 ID=.570;gene=mmuP;locus_tag=b0260;gene_synonym=ECK0262;gene_synonym=JW5027;gene_synonym=ykfD;function=Phage or Prophage Related;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009086 - methionine biosynthetic process;codon_start=1;transl_table=11;product=CP4-6 prophage%3B putative S-methylmethionine transporter;protein_id=AAC73363.2;db_xref=GI:87081708;db_xref=ASAP:ABE-0000893;db_xref=UniProtKB/Swiss-Prot:Q47689;db_xref=EcoGene:EG13342 EMBL gene 276715 277647 . + . ID=.571;gene=mmuM;locus_tag=b0261;gene_synonym=ECK0263;gene_synonym=JW0253;gene_synonym=yagD;db_xref=EcoGene:EG13343 EMBL CDS 276715 277647 . + 0 ID=.572;gene=mmuM;locus_tag=b0261;gene_synonym=ECK0263;gene_synonym=JW0253;gene_synonym=yagD;ec_number=2.1.1.10;function=Phage or Prophage Related;note=GO_process: GO:0006071 - glycerol metabolic process%3B GO_process: GO:0009086 - methionine biosynthetic process;codon_start=1;transl_table=11;product=CP4-6 prophage%3B S-methylmethionine:homocysteine methyltransferase;protein_id=AAC73364.1;db_xref=GI:1786456;db_xref=ASAP:ABE-0000895;db_xref=UniProtKB/Swiss-Prot:Q47690;db_xref=EcoGene:EG13343 EMBL repeat_region 277675 277741 . + . ID=.573;note=REP22 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 277756 278802 . - . ID=.574;gene=afuC;locus_tag=b0262;gene_synonym=ECK0264;gene_synonym=fbpC;gene_synonym=JW0254;gene_synonym=yagC;db_xref=EcoGene:EG12340 EMBL CDS 277756 278802 . - 0 ID=.575;gene=afuC;locus_tag=b0262;gene_synonym=ECK0264;gene_synonym=fbpC;gene_synonym=JW0254;gene_synonym=yagC;function=putative transport%3B Not classified%3B Phage or Prophage Related;note=putative ATP-binding component of a transport system;codon_start=1;transl_table=11;product=CP4-6 prophage%3B putative ferric transporter subunit;protein_id=AAC73365.2;db_xref=GI:87081709;db_xref=ASAP:ABE-0000898;db_xref=UniProtKB/Swiss-Prot:P37009;db_xref=EcoGene:EG12340 EMBL gene 278814 279161 . - . ID=.576;gene=afuB;locus_tag=b0263;gene_synonym=ECK0265;gene_synonym=fbpB;gene_synonym=JW0255;pseudo=true;db_xref=EcoGene:EG14277 EMBL CDS 278814 279161 . - 0 ID=.577;gene=afuB;locus_tag=b0263;gene_synonym=ECK0265;gene_synonym=fbpB;gene_synonym=JW0255;note=pseudogene%2C CP4-6 prophage%3B ferric iron ABC transporter permease gene fragment%3BPhage or Prophage Related;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0000900;db_xref=UniProtKB/Swiss-Prot:P75681;db_xref=EcoGene:EG14277 EMBL sequence_feature 279163 279930 . - . ID=.578;note=*mobile_element_type: insertion sequence:IS1B EMBL gene 279178 279681 . - . ID=.579;gene=insB1;locus_tag=b0264;gene_synonym=ECK0022;db_xref=EcoGene:EG40002 EMBL CDS 279178 279681 . - 0 ID=.580;gene=insB1;locus_tag=b0264;gene_synonym=ECK0022;function=IS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;codon_start=1;transl_table=11;product=IS1 transposase B;protein_id=AAC73367.1;db_xref=GI:1786459;db_xref=ASAP:ABE-0000906;db_xref=UniProtKB/Swiss-Prot:P0CF26;db_xref=EcoGene:EG40002 EMBL gene 279600 279875 . - . ID=.581;gene=insA;locus_tag=b0265;gene_synonym=ECK4521;note=insA2;db_xref=EcoGene:EG40001 EMBL CDS 279600 279875 . - 0 ID=.582;gene=insA;locus_tag=b0265;gene_synonym=ECK4521;function=IS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;codon_start=1;transl_table=11;product=IS1 repressor TnpA;protein_id=AAC73368.1;db_xref=GI:1786460;db_xref=ASAP:ABE-0000909;db_xref=UniProtKB/Swiss-Prot:P0CF08;db_xref=EcoGene:EG40001 EMBL sequence_feature 279931 280111 . + . ID=.583;note=*mobile_element_type: insertion sequence:IS30B EMBL gene 279931 280104 . + . ID=.584;gene=insI1;locus_tag=b4708;gene_synonym=ECK0258;pseudo=true;db_xref=EcoGene:EG40009 EMBL CDS 279931 280104 . + 0 ID=.585;gene=insI1;locus_tag=b4708;gene_synonym=ECK0258;note=IS30 transposase%3BIS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;pseudo=true;codon_start=1;transl_table=11;db_xref=EcoGene:EG40009 EMBL sequence_feature 280114 280425 . - . ID=.586;note=*mobile_element_type: insertion sequence:ISX EMBL gene 280114 280362 . - . ID=.587;gene=insX;locus_tag=b4505;gene_synonym=ECK4473;gene_synonym=ykgN;pseudo=true;db_xref=EcoGene:EG14418 EMBL CDS 280114 280362 . - 0 ID=.588;gene=insX;locus_tag=b4505;gene_synonym=ECK4473;gene_synonym=ykgN;note=pseudogene%2C IS3 family transposase family;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0285026;db_xref=UniProtKB/Swiss-Prot:Q79E92;db_xref=EcoGene:EG14418 EMBL gene 280427 280735 . - . ID=.589;gene=yagB;locus_tag=b0266;gene_synonym=ECK0267;gene_synonym=JW0259;pseudo=true;db_xref=EcoGene:EG12339 EMBL CDS 280427 280735 . - 0 ID=.590;gene=yagB;locus_tag=b0266;gene_synonym=ECK0267;gene_synonym=JW0259;note=pseudogene%2C CP4-6 prophage%3BPhage or Prophage Related;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0000912;db_xref=UniProtKB/Swiss-Prot:P37008;db_xref=EcoGene:EG12339 EMBL gene 280829 281983 . - . ID=.591;gene=yagA;locus_tag=b0267;gene_synonym=ECK0268;gene_synonym=JW0260;db_xref=EcoGene:EG12338 EMBL CDS 280829 281983 . - 0 ID=.592;gene=yagA;locus_tag=b0267;gene_synonym=ECK0268;gene_synonym=JW0260;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=CP4-6 prophage%3B putative DNA-binding transcriptional regulator;protein_id=AAC73370.1;db_xref=GI:1786462;db_xref=ASAP:ABE-0000915;db_xref=UniProtKB/Swiss-Prot:P37007;db_xref=EcoGene:EG12338 EMBL gene 282278 283186 . + . ID=.593;gene=yagE;locus_tag=b0268;gene_synonym=ECK0269;gene_synonym=JW0261;db_xref=EcoGene:EG13344 EMBL CDS 282278 283186 . + 0 ID=.594;gene=yagE;locus_tag=b0268;gene_synonym=ECK0269;gene_synonym=JW0261;function=Phage or Prophage Related;note=putative lyase/synthase;codon_start=1;transl_table=11;product=2-keto-3-deoxy gluconate (KDG) aldolase%3B CP4-6 prophage;protein_id=AAC73371.2;db_xref=GI:345297170;db_xref=ASAP:ABE-0000921;db_xref=UniProtKB/Swiss-Prot:P75682;db_xref=EcoGene:EG13344 EMBL gene 283201 285168 . + . ID=.595;gene=yagF;locus_tag=b0269;gene_synonym=ECK0270;gene_synonym=JW0262;db_xref=EcoGene:EG13345 EMBL CDS 283201 285168 . + 0 ID=.596;gene=yagF;locus_tag=b0269;gene_synonym=ECK0270;gene_synonym=JW0262;function=Phage or Prophage Related;note=putative dehydratase;codon_start=1;transl_table=11;product=CP4-6 prophage%3B dehydratase family protein;protein_id=AAC73372.1;db_xref=GI:1786464;db_xref=ASAP:ABE-0000923;db_xref=UniProtKB/Swiss-Prot:P77596;db_xref=EcoGene:EG13345 EMBL gene 285395 286777 . + . ID=.597;gene=yagG;locus_tag=b0270;gene_synonym=ECK0271;gene_synonym=JW0263;db_xref=EcoGene:EG13346 EMBL CDS 285395 286777 . + 0 ID=.598;gene=yagG;locus_tag=b0270;gene_synonym=ECK0271;gene_synonym=JW0263;function=Phage or Prophage Related;note=putative permease;codon_start=1;transl_table=11;product=CP4-6 prophage%3B putative sugar transporter;protein_id=AAC73373.1;db_xref=GI:1786466;db_xref=ASAP:ABE-0000929;db_xref=UniProtKB/Swiss-Prot:P75683;db_xref=EcoGene:EG13346 EMBL gene 286789 288399 . + . ID=.599;gene=yagH;locus_tag=b0271;gene_synonym=ECK0272;gene_synonym=JW0264;db_xref=EcoGene:EG13347 EMBL CDS 286789 288399 . + 0 ID=.600;gene=yagH;locus_tag=b0271;gene_synonym=ECK0272;gene_synonym=JW0264;function=Phage or Prophage Related;note=putative beta-xylosidase;codon_start=1;transl_table=11;product=CP4-6 prophage%3B putative xylosidase/arabinosidase;protein_id=AAC73374.1;db_xref=GI:1786467;db_xref=ASAP:ABE-0000931;db_xref=UniProtKB/Swiss-Prot:P77713;db_xref=EcoGene:EG13347 EMBL gene 288404 289162 . - . ID=.601;gene=yagI;locus_tag=b0272;gene_synonym=ECK0273;gene_synonym=JW0265;db_xref=EcoGene:EG13349 EMBL CDS 288404 289162 . - 0 ID=.602;gene=yagI;locus_tag=b0272;gene_synonym=ECK0273;gene_synonym=JW0265;function=Phage or Prophage Related;note=putative regulator%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=CP4-6 prophage%3B putative DNA-binding transcriptional regulator;protein_id=AAC73375.1;db_xref=GI:1786468;db_xref=ASAP:ABE-0000933;db_xref=UniProtKB/Swiss-Prot:P77300;db_xref=EcoGene:EG13349 EMBL gene 289301 290305 . - . ID=.603;gene=argF;locus_tag=b0273;gene_synonym=Arg5;gene_synonym=argD;gene_synonym=ECK0274;gene_synonym=JW0266;db_xref=EcoGene:EG10067 EMBL CDS 289301 290305 . - 0 ID=.604;gene=argF;locus_tag=b0273;gene_synonym=Arg5;gene_synonym=argD;gene_synonym=ECK0274;gene_synonym=JW0266;ec_number=2.1.3.3;function=enzyme%3B Amino acid biosynthesis: Arginine%3B Phage or Prophage Related;note=ornithine carbamoyltransferase 2%2C chain F%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006526 - arginine biosynthetic process;codon_start=1;transl_table=11;product=ornithine carbamoyltransferase 2%2C chain F%3B CP4-6 prophage;protein_id=AAC73376.1;db_xref=GI:1786469;db_xref=ASAP:ABE-0000939;db_xref=UniProtKB/Swiss-Prot:P06960;db_xref=EcoGene:EG10067 EMBL gene 290429 290633 . + . ID=.605;gene=ykgS;locus_tag=b4688;gene_synonym=ECK4504;pseudo=true;db_xref=EcoGene:EG14492 EMBL CDS 290429 290633 . + 0 ID=.606;gene=ykgS;locus_tag=b4688;gene_synonym=ECK4504;note=pseudogene;pseudo=true;codon_start=1;transl_table=11;db_xref=EcoGene:EG14492 EMBL sequence_feature 290634 291401 . - . ID=.607;note=*mobile_element_type: insertion sequence:IS1C EMBL gene 290649 291152 . - . ID=.608;gene=insB1;locus_tag=b0274;gene_synonym=ECK0022;db_xref=EcoGene:EG40002 EMBL CDS 290649 291152 . - 0 ID=.609;gene=insB1;locus_tag=b0274;gene_synonym=ECK0022;function=IS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;codon_start=1;transl_table=11;product=IS1 transposase B;protein_id=AAC73377.1;db_xref=GI:1786470;db_xref=ASAP:ABE-0000948;db_xref=UniProtKB/Swiss-Prot:P0CF27;db_xref=EcoGene:EG40002 EMBL gene 291071 291346 . - . ID=.610;gene=insA;locus_tag=b0275;gene_synonym=ECK4523;note=insA3;db_xref=EcoGene:EG40001 EMBL CDS 291071 291346 . - 0 ID=.611;gene=insA;locus_tag=b0275;gene_synonym=ECK4523;function=IS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;codon_start=1;transl_table=11;product=IS1 repressor TnpA;protein_id=AAC73378.1;db_xref=GI:1786471;db_xref=ASAP:ABE-0000951;db_xref=UniProtKB/Swiss-Prot:P0CF09;db_xref=EcoGene:EG40001 EMBL gene 291404 292231 . + . ID=.612;gene=yagJ;locus_tag=b0276;gene_synonym=ECK0275;gene_synonym=JW0270;pseudo=true;db_xref=EcoGene:EG13549 EMBL CDS 291404 292231 . + 0 ID=.613;gene=yagJ;locus_tag=b0276;gene_synonym=ECK0275;gene_synonym=JW0270;note=CP4-6 prophage%3B uncharacterized protein%3BPhage or Prophage Related;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0000963;db_xref=UniProtKB/Swiss-Prot:P77169;db_xref=EcoGene:EG13549 EMBL gene 292322 292948 . - . ID=.614;gene=yagK;locus_tag=b0277;gene_synonym=ECK0276;gene_synonym=JW0271;db_xref=EcoGene:EG13550 EMBL CDS 292322 292948 . - 0 ID=.615;gene=yagK;locus_tag=b0277;gene_synonym=ECK0276;gene_synonym=JW0271;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=CP4-6 prophage%3B conserved protein;protein_id=AAC73380.1;db_xref=GI:1786473;db_xref=ASAP:ABE-0000965;db_xref=UniProtKB/Swiss-Prot:P77657;db_xref=EcoGene:EG13550 EMBL gene 293220 293918 . - . ID=.616;gene=yagL;locus_tag=b0278;gene_synonym=ECK0277;gene_synonym=JW0272;db_xref=EcoGene:EG13551 EMBL CDS 293220 293918 . - 0 ID=.617;gene=yagL;locus_tag=b0278;gene_synonym=ECK0277;gene_synonym=JW0272;function=Phage or Prophage Related;note=DNA-binding protein;codon_start=1;transl_table=11;product=CP4-6 prophage%3B DNA-binding protein;protein_id=AAC73381.1;db_xref=GI:1786474;db_xref=ASAP:ABE-0000970;db_xref=UniProtKB/Swiss-Prot:P77607;db_xref=EcoGene:EG13551 EMBL gene 293945 294799 . - . ID=.618;gene=yagM;locus_tag=b0279;gene_synonym=ECK0278;gene_synonym=JW0273;db_xref=EcoGene:EG13552 EMBL CDS 293945 294799 . - 0 ID=.619;gene=yagM;locus_tag=b0279;gene_synonym=ECK0278;gene_synonym=JW0273;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=CP4-6 prophage%3B uncharacterized protein;protein_id=AAC73382.1;db_xref=GI:2367101;db_xref=ASAP:ABE-0000972;db_xref=UniProtKB/Swiss-Prot:P71296;db_xref=EcoGene:EG13552 EMBL gene 295139 295579 . - . ID=.620;gene=yagN;locus_tag=b0280;gene_synonym=ECK0279;gene_synonym=JW0274;db_xref=EcoGene:EG13553 EMBL CDS 295139 295579 . - 0 ID=.621;gene=yagN;locus_tag=b0280;gene_synonym=ECK0279;gene_synonym=JW0274;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=CP4-6 prophage%3B uncharacterized protein;protein_id=AAC73383.1;db_xref=GI:2367102;db_xref=ASAP:ABE-0000976;db_xref=UniProtKB/Swiss-Prot:P71297;db_xref=EcoGene:EG13553 EMBL gene 295696 297096 . - . ID=.622;gene=intF;locus_tag=b0281;gene_synonym=ECK0280;gene_synonym=JW0275;gene_synonym=yagO;db_xref=EcoGene:EG13554 EMBL CDS 295696 297096 . - 0 ID=.623;gene=intF;locus_tag=b0281;gene_synonym=ECK0280;gene_synonym=JW0275;gene_synonym=yagO;function=Phage or Prophage Related;note=putative phage integrase;codon_start=1;transl_table=11;product=CP4-6 prophage%3B putative phage integrase;protein_id=AAC73384.1;db_xref=GI:2367104;db_xref=ASAP:ABE-0000979;db_xref=UniProtKB/Swiss-Prot:P71298;db_xref=EcoGene:EG13554 EMBL gene 297206 297254 . + . ID=.624;gene=ptwF;locus_tag=b4629;gene_synonym=ECK4462;pseudo=true;db_xref=EcoGene:EG31171 EMBL tRNA 297206 297254 . + . ID=.625;gene=ptwF;locus_tag=b4629;gene_synonym=ECK4462;product=tRNA-OTHER;pseudo=true;db_xref=EcoGene:EG31171 EMBL gene 297381 297719 . - . ID=.626;gene=yagP;locus_tag=b4694;gene_synonym=ECK0281;gene_synonym=JW0276;pseudo=true;db_xref=EcoGene:EG13555 EMBL CDS 297381 297719 . - 0 ID=.627;gene=yagP;locus_tag=b4694;gene_synonym=ECK0281;gene_synonym=JW0276;note=pseudogene%2C LysR family%2C fragment%3Bputative regulator%3B Not classified%3B putative transcriptional regulator LYSR-type%3B GO_process: GO:0006355 - regulation of transcription%2C DNA-dependent;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0000982;db_xref=UniProtKB/Swiss-Prot:P75684;db_xref=EcoGene:EG13555 EMBL gene 297714 297791 . - . ID=.628;gene=ykgT;locus_tag=b4695;gene_synonym=ECK4508;gene_synonym=yagP;pseudo=true;db_xref=EcoGene:EG14496 EMBL CDS 297714 297791 . - 0 ID=.629;gene=ykgT;locus_tag=b4695;gene_synonym=ECK4508;gene_synonym=yagP;note=pseudogene%2C MobA-related;pseudo=true;codon_start=1;transl_table=11;db_xref=EcoGene:EG14496 EMBL gene 297770 298726 . - . ID=.630;gene=paoD;locus_tag=b0283;gene_synonym=ECK0282;gene_synonym=JW0277;gene_synonym=yagQ;db_xref=EcoGene:EG13556 EMBL CDS 297770 298726 . - 0 ID=.631;gene=paoD;locus_tag=b0283;gene_synonym=ECK0282;gene_synonym=JW0277;gene_synonym=yagQ;codon_start=1;transl_table=11;product=moco insertion factor for PaoABC aldehyde oxidoreductase;protein_id=AAC73386.1;db_xref=GI:1786477;db_xref=ASAP:ABE-0000984;db_xref=UniProtKB/Swiss-Prot:P77183;db_xref=EcoGene:EG13556 EMBL gene 298736 300934 . - . ID=.632;gene=paoC;locus_tag=b0284;gene_synonym=ECK0283;gene_synonym=hsm;gene_synonym=JW0278;gene_synonym=yagR;db_xref=EcoGene:EG13557 EMBL CDS 298736 300934 . - 0 ID=.633;gene=paoC;locus_tag=b0284;gene_synonym=ECK0283;gene_synonym=hsm;gene_synonym=JW0278;gene_synonym=yagR;function=enzyme%3B Not classified;codon_start=1;transl_table=11;product=PaoABC aldehyde oxidoreductase%2C Moco-containing subunit;protein_id=AAC73387.1;db_xref=GI:1786478;db_xref=ASAP:ABE-0000988;db_xref=UniProtKB/Swiss-Prot:P77489;db_xref=EcoGene:EG13557 EMBL gene 300931 301887 . - . ID=.634;gene=paoB;locus_tag=b0285;gene_synonym=ECK0284;gene_synonym=JW0279;gene_synonym=yagS;db_xref=EcoGene:EG13558 EMBL CDS 300931 301887 . - 0 ID=.635;gene=paoB;locus_tag=b0285;gene_synonym=ECK0284;gene_synonym=JW0279;gene_synonym=yagS;function=enzyme%3B Not classified;codon_start=1;transl_table=11;product=PaoABC aldehyde oxidoreductase%2C FAD-containing subunit;protein_id=AAC73388.1;db_xref=GI:1786479;db_xref=ASAP:ABE-0000990;db_xref=UniProtKB/Swiss-Prot:P77324;db_xref=EcoGene:EG13558 EMBL gene 301884 302573 . - . ID=.636;gene=paoA;locus_tag=b0286;gene_synonym=ECK0285;gene_synonym=JW0280;gene_synonym=yagT;db_xref=EcoGene:EG13559 EMBL CDS 301884 302573 . - 0 ID=.637;gene=paoA;locus_tag=b0286;gene_synonym=ECK0285;gene_synonym=JW0280;gene_synonym=yagT;function=enzyme%3B Not classified;note=putative xanthine dehydrogenase;codon_start=1;transl_table=11;product=PaoABC aldehyde oxidoreductase%2C 2Fe-2S subunit;protein_id=AAC73389.1;db_xref=GI:1786480;db_xref=ASAP:ABE-0000992;db_xref=UniProtKB/Swiss-Prot:P77165;db_xref=EcoGene:EG13559 EMBL gene 302991 303605 . + . ID=.638;gene=yagU;locus_tag=b0287;gene_synonym=ECK0286;gene_synonym=JW0281;db_xref=EcoGene:EG13560 EMBL CDS 302991 303605 . + 0 ID=.639;gene=yagU;locus_tag=b0287;gene_synonym=ECK0286;gene_synonym=JW0281;codon_start=1;transl_table=11;product=DUF1440 family inner membrane acid resistance protein;protein_id=AAC73390.1;db_xref=GI:1786481;db_xref=ASAP:ABE-0000995;db_xref=UniProtKB/Swiss-Prot:P0AAA1;db_xref=EcoGene:EG13560 EMBL gene 303853 304182 . - . ID=.640;gene=ykgJ;locus_tag=b0288;gene_synonym=ECK0287;gene_synonym=JW0282;db_xref=EcoGene:EG14323 EMBL CDS 303853 304182 . - 0 ID=.641;gene=ykgJ;locus_tag=b0288;gene_synonym=ECK0287;gene_synonym=JW0282;function=putative carrier%3B Not classified;note=putative ferredoxin%3B GO_function: GO:0009055 - electron carrier activity;codon_start=1;transl_table=11;product=UPF0153 cysteine cluster protein;protein_id=AAC73391.1;db_xref=GI:2367105;db_xref=ASAP:ABE-0000997;db_xref=UniProtKB/Swiss-Prot:P0AAL9;db_xref=EcoGene:EG14323 EMBL gene 304495 305205 . - . ID=.642;gene=ecpE;locus_tag=b0289;gene_synonym=ECK0288;gene_synonym=JW5030;gene_synonym=matF;gene_synonym=yagV;db_xref=EcoGene:EG13561 EMBL CDS 304495 305205 . - 0 ID=.643;gene=ecpE;locus_tag=b0289;gene_synonym=ECK0288;gene_synonym=JW5030;gene_synonym=matF;gene_synonym=yagV;function=factor%3B Surface structures;codon_start=1;transl_table=11;product=ECP production pilus chaperone;protein_id=AAC73392.2;db_xref=GI:87081712;db_xref=ASAP:ABE-0001000;db_xref=UniProtKB/Swiss-Prot:P77263;db_xref=EcoGene:EG13561 EMBL gene 305174 306817 . - . ID=.644;gene=ecpD;locus_tag=b0290;gene_synonym=ECK0289;gene_synonym=JW0284;gene_synonym=matE;gene_synonym=yagW;db_xref=EcoGene:EG13562 EMBL CDS 305174 306817 . - 0 ID=.645;gene=ecpD;locus_tag=b0290;gene_synonym=ECK0289;gene_synonym=JW0284;gene_synonym=matE;gene_synonym=yagW;function=structural component%3B Surface structures;note=putative receptor;codon_start=1;transl_table=11;product=polymerized tip adhesin of ECP fibers;protein_id=AAC73393.1;db_xref=GI:1786483;db_xref=ASAP:ABE-0001002;db_xref=UniProtKB/Swiss-Prot:P77694;db_xref=EcoGene:EG13562 EMBL gene 306807 309332 . - . ID=.646;gene=ecpC;locus_tag=b0291;gene_synonym=ECK0290;gene_synonym=JW0285;gene_synonym=matD;gene_synonym=yagX;db_xref=EcoGene:EG13563 EMBL CDS 306807 309332 . - 0 ID=.647;gene=ecpC;locus_tag=b0291;gene_synonym=ECK0290;gene_synonym=JW0285;gene_synonym=matD;gene_synonym=yagX;function=membrane%3B Outer membrane constituents;note=putative enzyme;codon_start=1;transl_table=11;product=ECP production outer membrane protein;protein_id=AAC73394.1;db_xref=GI:1786484;db_xref=ASAP:ABE-0001005;db_xref=UniProtKB/Swiss-Prot:P77802;db_xref=EcoGene:EG13563 EMBL gene 309358 310026 . - . ID=.648;gene=ecpB;locus_tag=b0292;gene_synonym=ECK0291;gene_synonym=JW0286;gene_synonym=matC;gene_synonym=yagY;db_xref=EcoGene:EG13564 EMBL CDS 309358 310026 . - 0 ID=.649;gene=ecpB;locus_tag=b0292;gene_synonym=ECK0291;gene_synonym=JW0286;gene_synonym=matC;gene_synonym=yagY;function=factor%3B Surface structures;codon_start=1;transl_table=11;product=ECP production pilus chaperone;protein_id=AAC73395.1;db_xref=GI:1786485;db_xref=ASAP:ABE-0001007;db_xref=UniProtKB/Swiss-Prot:P77188;db_xref=EcoGene:EG13564 EMBL gene 310084 310671 . - . ID=.650;gene=ecpA;locus_tag=b0293;gene_synonym=ECK0292;gene_synonym=JW0287;gene_synonym=matB;gene_synonym=yagZ;db_xref=EcoGene:EG13565 EMBL CDS 310084 310671 . - 0 ID=.651;gene=ecpA;locus_tag=b0293;gene_synonym=ECK0292;gene_synonym=JW0287;gene_synonym=matB;gene_synonym=yagZ;function=structural component%3B Surface structures;codon_start=1;transl_table=11;product=ECP pilin;protein_id=AAC73396.1;db_xref=GI:1786486;db_xref=ASAP:ABE-0001009;db_xref=UniProtKB/Swiss-Prot:P0AAA3;db_xref=EcoGene:EG13565 EMBL gene 310746 311336 . - . ID=.652;gene=ecpR;locus_tag=b0294;gene_synonym=ECK0293;gene_synonym=JW5031;gene_synonym=matA;gene_synonym=ykgK;db_xref=EcoGene:EG14324 EMBL CDS 310746 311336 . - 0 ID=.653;gene=ecpR;locus_tag=b0294;gene_synonym=ECK0293;gene_synonym=JW5031;gene_synonym=matA;gene_synonym=ykgK;function=putative regulator%3B Not classified;note=putative regulator;codon_start=1;transl_table=11;product=putative transcriptional regulator for the ecp operon;protein_id=AAC73397.1;db_xref=GI:2367106;db_xref=ASAP:ABE-0001011;db_xref=UniProtKB/Swiss-Prot:P71301;db_xref=EcoGene:EG14324 EMBL gene 312112 312339 . + . ID=.654;gene=ykgL;locus_tag=b0295;gene_synonym=ECK0294;gene_synonym=JW5033;db_xref=EcoGene:EG14325 EMBL CDS 312112 312339 . + 0 ID=.655;gene=ykgL;locus_tag=b0295;gene_synonym=ECK0294;gene_synonym=JW5033;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC73398.1;db_xref=GI:2367107;db_xref=ASAP:ABE-0001019;db_xref=UniProtKB/Swiss-Prot:P56257;db_xref=EcoGene:EG14325 EMBL gene 312374 312514 . - . ID=.656;gene=ykgO;locus_tag=b4506;gene_synonym=ECK0295;gene_synonym=JW5034;gene_synonym=rpmJ2;db_xref=EcoGene:EG14432 EMBL CDS 312374 312514 . - 0 ID=.657;gene=ykgO;locus_tag=b4506;gene_synonym=ECK0295;gene_synonym=JW5034;gene_synonym=rpmJ2;codon_start=1;transl_table=11;product=RpmJ-like protein;protein_id=ABD18636.1;db_xref=GI:87081713;db_xref=ASAP:ABE-0285027;db_xref=UniProtKB/Swiss-Prot:Q2EEQ2;db_xref=EcoGene:EG14432 EMBL gene 312514 312777 . - . ID=.658;gene=ykgM;locus_tag=b0296;gene_synonym=ECK0296;gene_synonym=JW5035;gene_synonym=rpmE2;db_xref=EcoGene:EG14326 EMBL CDS 312514 312777 . - 0 ID=.659;gene=ykgM;locus_tag=b0296;gene_synonym=ECK0296;gene_synonym=JW5035;gene_synonym=rpmE2;codon_start=1;transl_table=11;product=50S ribosomal protein L31 type B%3B alternative zinc-limitation L31 protein;protein_id=AAC73399.1;db_xref=GI:2367109;db_xref=ASAP:ABE-0001021;db_xref=UniProtKB/Swiss-Prot:P0A7N1;db_xref=EcoGene:EG14326 EMBL gene 313141 313242 . - . ID=.660;gene=ykgR;locus_tag=b4671;gene_synonym=ECK4486;db_xref=EcoGene:EG14476 EMBL CDS 313141 313242 . - 0 ID=.661;gene=ykgR;locus_tag=b4671;gene_synonym=ECK4486;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=ACO59990.1;db_xref=GI:226510926;db_xref=UniProtKB/Swiss-Prot:C1P5Z8;db_xref=EcoGene:EG14476 EMBL gene 313716 313805 . - . ID=.662;gene=ykgP;locus_tag=b4630;gene_synonym=ECK4446;pseudo=true;db_xref=EcoGene:EG14433 EMBL CDS 313716 313805 . - 0 ID=.663;gene=ykgP;locus_tag=b4630;gene_synonym=ECK4446;note=pseudogene%2C oxidoreductase family;pseudo=true;codon_start=1;transl_table=11;db_xref=EcoGene:EG14433 EMBL gene 314357 315228 . + . ID=.664;gene=eaeH;locus_tag=b0297;gene_synonym=ECK0297;gene_synonym=JW0291;pseudo=true;db_xref=EcoGene:EG12161 EMBL CDS 314357 315228 . + 0 ID=.665;gene=eaeH;locus_tag=b0297;gene_synonym=ECK0297;gene_synonym=JW0291;note=pseudogene%2C attaching and effacing protein homology%3Bfactor%3B Not classified%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0001025;db_xref=UniProtKB/Swiss-Prot:P36943;db_xref=EcoGene:EG12161 EMBL sequence_feature 315229 316483 . + . ID=.666;note=*mobile_element_type: insertion sequence:IS3A EMBL gene 315291 315590 . + . ID=.667;gene=insE1;locus_tag=b0298;gene_synonym=ECK0298;db_xref=EcoGene:EG40005 EMBL CDS 315291 315590 . + 0 ID=.668;gene=insE1;locus_tag=b0298;gene_synonym=ECK0298;function=IS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;codon_start=1;transl_table=11;product=IS3 transposase A;protein_id=AAC73401.2;db_xref=GI:226510927;db_xref=ASAP:ABE-0001028;db_xref=UniProtKB/Swiss-Prot:P0CF66;db_xref=EcoGene:EG40005 EMBL gene 315587 316453 . + . ID=.669;gene=insF1;locus_tag=b0299;gene_synonym=ECK0299;db_xref=EcoGene:EG40006 EMBL CDS 315587 316453 . + 0 ID=.670;gene=insF1;locus_tag=b0299;gene_synonym=ECK0299;function=IS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;codon_start=1;transl_table=11;product=IS3 transposase B;protein_id=AAC73402.1;db_xref=GI:1786490;db_xref=ASAP:ABE-0001030;db_xref=UniProtKB/Swiss-Prot:P0CF79;db_xref=EcoGene:EG40006 EMBL gene 316486 317169 . - . ID=.671;gene=ykgA;locus_tag=b0300;gene_synonym=ECK0300;gene_synonym=JW5037;pseudo=true;db_xref=EcoGene:EG13381 EMBL CDS 316486 317169 . - 0 ID=.672;gene=ykgA;locus_tag=b0300;gene_synonym=ECK0300;gene_synonym=JW5037;note=pseudogene%2C AraC family%3Bputative regulator%3B Not classified%3B putative ARAC-type regulatory protein%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0001032;db_xref=UniProtKB/Swiss-Prot:P77601;db_xref=EcoGene:EG13381 EMBL gene 317439 317567 . + . ID=.673;gene=ykgQ;locus_tag=b4631;gene_synonym=ECK4454;pseudo=true;db_xref=EcoGene:EG14443 EMBL CDS 317439 317567 . + 0 ID=.674;gene=ykgQ;locus_tag=b4631;gene_synonym=ECK4454;note=pseudogene%2C putative dehydrogenase;pseudo=true;codon_start=1;transl_table=11;db_xref=EcoGene:EG14443 EMBL gene 317726 318319 . - . ID=.675;gene=rclC;locus_tag=b0301;gene_synonym=ECK0301;gene_synonym=JW5038;db_xref=EcoGene:EG13579 EMBL CDS 317726 318319 . - 0 ID=.676;gene=rclC;locus_tag=b0301;gene_synonym=ECK0301;gene_synonym=JW5038;codon_start=1;transl_table=11;product=reactive chlorine species (RCS) stress resistance inner membrane protein;protein_id=AAC73404.2;db_xref=GI:87081715;db_xref=ASAP:ABE-0001038;db_xref=UniProtKB/Swiss-Prot:P75685;db_xref=EcoGene:EG13579 EMBL gene 318331 318567 . - . ID=.677;gene=rclB;locus_tag=b0303;gene_synonym=ECK0302;gene_synonym=JW5039;gene_synonym=ykgB;gene_synonym=ykgI;db_xref=EcoGene:EG14278 EMBL CDS 318331 318567 . - 0 ID=.678;gene=rclB;locus_tag=b0303;gene_synonym=ECK0302;gene_synonym=JW5039;gene_synonym=ykgB;gene_synonym=ykgI;note=the overlapping ORF b0302 on the opposite strand is no longer thought to be an actual gene%2C and has been deaccessioned;codon_start=1;transl_table=11;product=reactive chlorine species (RCS) stress resistance periplasmic protein;protein_id=AAC73406.2;db_xref=GI:87081716;db_xref=ASAP:ABE-0001043;db_xref=UniProtKB/Swiss-Prot:P75687;db_xref=EcoGene:EG14278 EMBL gene 318676 320001 . - . ID=.679;gene=rclA;locus_tag=b0304;gene_synonym=ECK0303;gene_synonym=JW5040;gene_synonym=ykgC;db_xref=EcoGene:EG13580 EMBL CDS 318676 320001 . - 0 ID=.680;gene=rclA;locus_tag=b0304;gene_synonym=ECK0303;gene_synonym=JW5040;gene_synonym=ykgC;function=putative enzyme%3B Not classified;note=putative oxidoreductase;codon_start=1;transl_table=11;product=reactive chlorine stress species (RCS) resistance protein%3B pyridine nucleotide-dependent disulfide oxidoreductase family;protein_id=AAC73407.2;db_xref=GI:87081717;db_xref=ASAP:ABE-0001048;db_xref=UniProtKB/Swiss-Prot:P77212;db_xref=EcoGene:EG13580 EMBL gene 320227 321081 . + . ID=.681;gene=rclR;locus_tag=b0305;gene_synonym=ECK0304;gene_synonym=JW0298;gene_synonym=ykgD;db_xref=EcoGene:EG13581 EMBL CDS 320227 321081 . + 0 ID=.682;gene=rclR;locus_tag=b0305;gene_synonym=ECK0304;gene_synonym=JW0298;gene_synonym=ykgD;function=regulator%3B Not classified;note=putative ARAC-type regulatory protein%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=reactive chlorine species (RCS)-specific activator of the rcl genes;protein_id=AAC73408.1;db_xref=GI:1786496;db_xref=ASAP:ABE-0001054;db_xref=UniProtKB/Swiss-Prot:P77379;db_xref=EcoGene:EG13581 EMBL gene 321608 322327 . + . ID=.683;gene=ykgE;locus_tag=b0306;gene_synonym=ECK0305;gene_synonym=JW5041;db_xref=EcoGene:EG13582 EMBL CDS 321608 322327 . + 0 ID=.684;gene=ykgE;locus_tag=b0306;gene_synonym=ECK0305;gene_synonym=JW5041;function=putative carrier%3B Energy metabolism%2C carbon: Electron transport;note=putative dehydrogenase subunit;codon_start=1;transl_table=11;product=cysteine-rich LutA family protein%3B putative electron transport chain YkgEFG component;protein_id=AAC73409.1;db_xref=GI:1786497;db_xref=ASAP:ABE-0001058;db_xref=UniProtKB/Swiss-Prot:P77252;db_xref=EcoGene:EG13582 EMBL gene 322338 323765 . + . ID=.685;gene=ykgF;locus_tag=b0307;gene_synonym=ECK0306;gene_synonym=JW0300;db_xref=EcoGene:EG13583 EMBL CDS 322338 323765 . + 0 ID=.686;gene=ykgF;locus_tag=b0307;gene_synonym=ECK0306;gene_synonym=JW0300;function=putative carrier%3B Energy metabolism%2C carbon: Electron transport;codon_start=1;transl_table=11;product=ferridoxin-like LutB family protein%3B putative electron transport chain YkgEFG component;protein_id=AAC73410.1;db_xref=GI:1786498;db_xref=ASAP:ABE-0001060;db_xref=UniProtKB/Swiss-Prot:P77536;db_xref=EcoGene:EG13583 EMBL gene 323758 324453 . + . ID=.687;gene=ykgG;locus_tag=b0308;gene_synonym=ECK0307;gene_synonym=JW5042;db_xref=EcoGene:EG13584 EMBL CDS 323758 324453 . + 0 ID=.688;gene=ykgG;locus_tag=b0308;gene_synonym=ECK0307;gene_synonym=JW5042;function=putative carrier%3B Energy metabolism%2C carbon: Electron transport;note=putative transporter;codon_start=1;transl_table=11;product=LutC family protein%3B putative electron transport chain YkgEFG component;protein_id=AAC73411.2;db_xref=GI:87081718;db_xref=ASAP:ABE-0001062;db_xref=UniProtKB/Swiss-Prot:P77433;db_xref=EcoGene:EG13584 EMBL gene 324696 325364 . - . ID=.689;gene=ykgH;locus_tag=b0310;gene_synonym=ECK0308;gene_synonym=JW0302;db_xref=EcoGene:EG13585 EMBL CDS 324696 325364 . - 0 ID=.690;gene=ykgH;locus_tag=b0310;gene_synonym=ECK0308;gene_synonym=JW0302;codon_start=1;transl_table=11;product=putative inner membrane protein;protein_id=AAC73413.1;db_xref=GI:1786502;db_xref=ASAP:ABE-0001066;db_xref=UniProtKB/Swiss-Prot:P77180;db_xref=EcoGene:EG13585 EMBL gene 325577 327247 . - . ID=.691;gene=betA;locus_tag=b0311;gene_synonym=ECK0309;gene_synonym=JW0303;db_xref=EcoGene:EG10109 EMBL CDS 325577 327247 . - 0 ID=.692;gene=betA;locus_tag=b0311;gene_synonym=ECK0309;gene_synonym=JW0303;ec_number=1.1.99.1;function=enzyme%3B Osmotic adaptation;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006578 - betaine biosynthetic process%3B GO_process: GO:0006970 - response to osmotic stress;codon_start=1;transl_table=11;product=choline dehydrogenase%2C a flavoprotein;protein_id=AAC73414.1;db_xref=GI:1786503;db_xref=ASAP:ABE-0001070;db_xref=UniProtKB/Swiss-Prot:P17444;db_xref=EcoGene:EG10109 EMBL gene 327261 328733 . - . ID=.693;gene=betB;locus_tag=b0312;gene_synonym=ECK0310;gene_synonym=JW0304;db_xref=EcoGene:EG10110 EMBL CDS 327261 328733 . - 0 ID=.694;gene=betB;locus_tag=b0312;gene_synonym=ECK0310;gene_synonym=JW0304;ec_number=1.2.1.8;function=enzyme%3B Osmotic adaptation;note=NAD+-dependent betaine aldehyde dehydrogenase%3B GO_process: GO:0006578 - betaine biosynthetic process%3B GO_process: GO:0006970 - response to osmotic stress;codon_start=1;transl_table=11;product=betaine aldehyde dehydrogenase%2C NAD-dependent;protein_id=AAC73415.1;db_xref=GI:1786504;db_xref=ASAP:ABE-0001072;db_xref=UniProtKB/Swiss-Prot:P17445;db_xref=EcoGene:EG10110 EMBL gene 328747 329334 . - . ID=.695;gene=betI;locus_tag=b0313;gene_synonym=ECK0311;gene_synonym=JW0305;db_xref=EcoGene:EG10111 EMBL CDS 328747 329334 . - 0 ID=.696;gene=betI;locus_tag=b0313;gene_synonym=ECK0311;gene_synonym=JW0305;function=putative regulator%3B Osmotic adaptation;note=probably transcriptional repressor of bet genes%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription%3B GO_process: GO:0006970 - response to osmotic stress;codon_start=1;transl_table=11;product=choline-inducible betIBA-betT divergent operon transcriptional repressor;protein_id=AAC73416.1;db_xref=GI:1786505;db_xref=ASAP:ABE-0001076;db_xref=UniProtKB/Swiss-Prot:P17446;db_xref=EcoGene:EG10111 EMBL gene 329463 331496 . + . ID=.697;gene=betT;locus_tag=b0314;gene_synonym=ECK0312;gene_synonym=JW0306;db_xref=EcoGene:EG10112 EMBL CDS 329463 331496 . + 0 ID=.698;gene=betT;locus_tag=b0314;gene_synonym=ECK0312;gene_synonym=JW0306;function=transport%3B Transport of small molecules: Other;note=high-affinity choline transport%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006578 - betaine biosynthetic process;codon_start=1;transl_table=11;product=choline transporter of high affinity;protein_id=AAC73417.1;db_xref=GI:1786506;db_xref=ASAP:ABE-0001080;db_xref=UniProtKB/Swiss-Prot:P0ABC9;db_xref=EcoGene:EG10112 EMBL gene 332371 333459 . + . ID=.699;gene=yahA;locus_tag=b0315;gene_synonym=ECK0313;gene_synonym=JW0307;db_xref=EcoGene:EG11236 EMBL CDS 332371 333459 . + 0 ID=.700;gene=yahA;locus_tag=b0315;gene_synonym=ECK0313;gene_synonym=JW0307;note=GO_process: GO:0006355 - regulation of transcription%2C DNA-dependent;codon_start=1;transl_table=11;product=c-di-GMP-specific phosphodiesterase;protein_id=AAC73418.1;db_xref=GI:1786507;db_xref=ASAP:ABE-0001086;db_xref=UniProtKB/Swiss-Prot:P21514;db_xref=EcoGene:EG11236 EMBL gene 333501 334433 . - . ID=.701;gene=yahB;locus_tag=b0316;gene_synonym=ECK0314;gene_synonym=JW0308;db_xref=EcoGene:EG13586 EMBL CDS 333501 334433 . - 0 ID=.702;gene=yahB;locus_tag=b0316;gene_synonym=ECK0314;gene_synonym=JW0308;function=putative regulator%3B Not classified;note=putative transcriptional regulator LYSR-type%3B GO_function: GO:0016563 - transcription activator activity%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=putative DNA-bindng transcriptional regulator;protein_id=AAC73419.1;db_xref=GI:1786508;db_xref=ASAP:ABE-0001088;db_xref=UniProtKB/Swiss-Prot:P77700;db_xref=EcoGene:EG13586 EMBL gene 334525 335022 . - . ID=.703;gene=yahC;locus_tag=b0317;gene_synonym=ECK0315;gene_synonym=JW0309;db_xref=EcoGene:EG13587 EMBL CDS 334525 335022 . - 0 ID=.704;gene=yahC;locus_tag=b0317;gene_synonym=ECK0315;gene_synonym=JW0309;codon_start=1;transl_table=11;product=putative inner membrane protein;protein_id=AAC73420.1;db_xref=GI:1786509;db_xref=ASAP:ABE-0001091;db_xref=UniProtKB/Swiss-Prot:P77219;db_xref=EcoGene:EG13587 EMBL gene 335280 335885 . + . ID=.705;gene=yahD;locus_tag=b0318;gene_synonym=ECK0316;gene_synonym=JW0310;db_xref=EcoGene:EG13588 EMBL CDS 335280 335885 . + 0 ID=.706;gene=yahD;locus_tag=b0318;gene_synonym=ECK0316;gene_synonym=JW0310;function=putative regulator%3B Not classified;note=putative transcription factor;codon_start=1;transl_table=11;product=ankyrin repeat protein;protein_id=AAC73421.1;db_xref=GI:1786511;db_xref=ASAP:ABE-0001095;db_xref=UniProtKB/Swiss-Prot:P77736;db_xref=EcoGene:EG13588 EMBL gene 335925 336788 . + . ID=.707;gene=yahE;locus_tag=b0319;gene_synonym=ECK0317;gene_synonym=JW0311;db_xref=EcoGene:EG13589 EMBL CDS 335925 336788 . + 0 ID=.708;gene=yahE;locus_tag=b0319;gene_synonym=ECK0317;gene_synonym=JW0311;codon_start=1;transl_table=11;product=DUF2877 family protein;protein_id=AAC73422.1;db_xref=GI:1786512;db_xref=ASAP:ABE-0001097;db_xref=UniProtKB/Swiss-Prot:P77297;db_xref=EcoGene:EG13589 EMBL gene 336778 338325 . + . ID=.709;gene=yahF;locus_tag=b0320;gene_synonym=ECK0318;gene_synonym=JW0312;db_xref=EcoGene:EG13590 EMBL CDS 336778 338325 . + 0 ID=.710;gene=yahF;locus_tag=b0320;gene_synonym=ECK0318;gene_synonym=JW0312;function=putative enzyme%3B Not classified;note=putative oxidoreductase subunit;codon_start=1;transl_table=11;product=putative NAD(P)-binding succinyl-CoA synthase;protein_id=AAC73423.1;db_xref=GI:1786513;db_xref=ASAP:ABE-0001099;db_xref=UniProtKB/Swiss-Prot:P77187;db_xref=EcoGene:EG13590 EMBL gene 338325 339743 . + . ID=.711;gene=yahG;locus_tag=b0321;gene_synonym=ECK0319;gene_synonym=JW0313;db_xref=EcoGene:EG13591 EMBL CDS 338325 339743 . + 0 ID=.712;gene=yahG;locus_tag=b0321;gene_synonym=ECK0319;gene_synonym=JW0313;codon_start=1;transl_table=11;product=DUF1116 family protein;protein_id=AAC73424.1;db_xref=GI:1786514;db_xref=ASAP:ABE-0001101;db_xref=UniProtKB/Swiss-Prot:P77221;db_xref=EcoGene:EG13591 EMBL repeat_region 339757 340114 . + . ID=.713;note=REP23 (repetitive extragenic palindromic) element%3B contains 8 REP sequences EMBL gene 340165 341115 . + . ID=.714;gene=yahI;locus_tag=b0323;gene_synonym=ECK0321;gene_synonym=JW0315;db_xref=EcoGene:EG13593 EMBL CDS 340165 341115 . + 0 ID=.715;gene=yahI;locus_tag=b0323;gene_synonym=ECK0321;gene_synonym=JW0315;function=putative enzyme%3B Not classified;note=putative kinase%3B GO_process: GO:0006526 - arginine biosynthetic process%3B GO_process: GO:0006221 - pyrimidine nucleotide biosynthetic process;codon_start=1;transl_table=11;product=carbamate kinase-like protein;protein_id=AAC73426.1;db_xref=GI:1786516;db_xref=ASAP:ABE-0001107;db_xref=UniProtKB/Swiss-Prot:P77624;db_xref=EcoGene:EG13593 EMBL gene 341125 342507 . + . ID=.716;gene=yahJ;locus_tag=b0324;gene_synonym=ECK0322;gene_synonym=JW0316;db_xref=EcoGene:EG13594 EMBL CDS 341125 342507 . + 0 ID=.717;gene=yahJ;locus_tag=b0324;gene_synonym=ECK0322;gene_synonym=JW0316;function=putative enzyme%3B Not classified;note=putative deaminase%3B GO_process: GO:0009310 - amine catabolic process;codon_start=1;transl_table=11;product=putative metallo-dependent hydrolase domain deaminase;protein_id=AAC73427.1;db_xref=GI:1786517;db_xref=ASAP:ABE-0001109;db_xref=UniProtKB/Swiss-Prot:P77554;db_xref=EcoGene:EG13594 EMBL gene 342884 343933 . + . ID=.718;gene=yahK;locus_tag=b0325;gene_synonym=ECK0323;gene_synonym=JW0317;db_xref=EcoGene:EG13595 EMBL CDS 342884 343933 . + 0 ID=.719;gene=yahK;locus_tag=b0325;gene_synonym=ECK0323;gene_synonym=JW0317;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=putative oxidoreductase;codon_start=1;transl_table=11;product=broad specificity NADPH-dependent aldehyde reductase%2C Zn-containing;protein_id=AAC73428.1;db_xref=GI:1786518;db_xref=ASAP:ABE-0001113;db_xref=UniProtKB/Swiss-Prot:P75691;db_xref=EcoGene:EG13595 EMBL gene 344176 344991 . + . ID=.720;gene=yahL;locus_tag=b0326;gene_synonym=ECK0324;gene_synonym=JW0318;db_xref=EcoGene:EG13596 EMBL CDS 344176 344991 . + 0 ID=.721;gene=yahL;locus_tag=b0326;gene_synonym=ECK0324;gene_synonym=JW0318;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC73429.1;db_xref=GI:1786519;db_xref=ASAP:ABE-0001117;db_xref=UniProtKB/Swiss-Prot:P77393;db_xref=EcoGene:EG13596 EMBL gene 345404 345649 . + . ID=.722;gene=yahM;locus_tag=b0327;gene_synonym=ECK0325;gene_synonym=JW5044;db_xref=EcoGene:EG13597 EMBL CDS 345404 345649 . + 0 ID=.723;gene=yahM;locus_tag=b0327;gene_synonym=ECK0325;gene_synonym=JW5044;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC73430.2;db_xref=GI:87081720;db_xref=ASAP:ABE-0001120;db_xref=UniProtKB/Swiss-Prot:P75692;db_xref=EcoGene:EG13597 EMBL gene 345666 346337 . - . ID=.724;gene=yahN;locus_tag=b0328;gene_synonym=ECK0326;gene_synonym=JW0320;db_xref=EcoGene:EG13598 EMBL CDS 345666 346337 . - 0 ID=.725;gene=yahN;locus_tag=b0328;gene_synonym=ECK0326;gene_synonym=JW0320;function=transport%3B Not classified;note=putative cytochrome subunit of dehydrogenase;codon_start=1;transl_table=11;product=amino acid exporter for proline%2C lysine%2C glutamate%2C homoserine;protein_id=AAC73431.1;db_xref=GI:1786522;db_xref=ASAP:ABE-0001122;db_xref=UniProtKB/Swiss-Prot:P75693;db_xref=EcoGene:EG13598 EMBL gene 346484 346759 . + . ID=.726;gene=yahO;locus_tag=b0329;gene_synonym=ECK0327;gene_synonym=JW0321;db_xref=EcoGene:EG13599 EMBL CDS 346484 346759 . + 0 ID=.727;gene=yahO;locus_tag=b0329;gene_synonym=ECK0327;gene_synonym=JW0321;codon_start=1;transl_table=11;product=periplasmic protein%2C function unknown%2C YhcN family;protein_id=AAC73432.1;db_xref=GI:1786523;db_xref=ASAP:ABE-0001130;db_xref=UniProtKB/Swiss-Prot:P75694;db_xref=EcoGene:EG13599 EMBL repeat_region 346824 346853 . + . ID=.728;note=REP24 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 346857 348443 . - . ID=.729;gene=prpR;locus_tag=b0330;gene_synonym=ECK0328;gene_synonym=JW0322;gene_synonym=yahP;db_xref=EcoGene:EG13600 EMBL CDS 346857 348443 . - 0 ID=.730;gene=prpR;locus_tag=b0330;gene_synonym=ECK0328;gene_synonym=JW0322;gene_synonym=yahP;function=regulator%3B Not classified;note=regulator for prp operon%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0019395 - fatty acid oxidation%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=propionate catabolism operon regulatory protein;protein_id=AAC73433.1;db_xref=GI:1786524;db_xref=ASAP:ABE-0001133;db_xref=UniProtKB/Swiss-Prot:P77743;db_xref=EcoGene:EG13600 EMBL gene 348682 349572 . + . ID=.731;gene=prpB;locus_tag=b0331;gene_synonym=ECK0329;gene_synonym=JW0323;gene_synonym=yahQ;db_xref=EcoGene:EG13601 EMBL CDS 348682 349572 . + 0 ID=.732;gene=prpB;locus_tag=b0331;gene_synonym=ECK0329;gene_synonym=JW0323;gene_synonym=yahQ;ec_number=4.1.3.30;function=putative enzyme%3B Not classified;note=putative phosphonomutase 2%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0019395 - fatty acid oxidation;codon_start=1;transl_table=11;product=2-methylisocitrate lyase;protein_id=AAC73434.1;db_xref=GI:1786525;db_xref=ASAP:ABE-0001138;db_xref=UniProtKB/Swiss-Prot:P77541;db_xref=EcoGene:EG13601 EMBL repeat_region 349605 349969 . + . ID=.733;note=REP25 (repetitive extragenic palindromic) element%3B contains 8 REP sequences EMBL gene 350012 351181 . + . ID=.734;gene=prpC;locus_tag=b0333;gene_synonym=ECK0330;gene_synonym=JW0324;gene_synonym=yahS;gene_synonym=yzzD;db_xref=EcoGene:EG11756 EMBL CDS 350012 351181 . + 0 ID=.735;gene=prpC;locus_tag=b0333;gene_synonym=ECK0330;gene_synonym=JW0324;gene_synonym=yahS;gene_synonym=yzzD;ec_number=2.3.3.1;function=putative enzyme%3B Not classified;note=putative citrate synthase%3B propionate metabolism?%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0019395 - fatty acid oxidation;codon_start=1;transl_table=11;product=2-methylcitrate synthase;protein_id=AAC73436.1;db_xref=GI:1786527;db_xref=ASAP:ABE-0001148;db_xref=UniProtKB/Swiss-Prot:P31660;db_xref=EcoGene:EG11756 EMBL gene 351215 352666 . + . ID=.736;gene=prpD;locus_tag=b0334;gene_synonym=acnC;gene_synonym=ECK0331;gene_synonym=JW0325;gene_synonym=yahT;db_xref=EcoGene:EG13603 EMBL CDS 351215 352666 . + 0 ID=.737;gene=prpD;locus_tag=b0334;gene_synonym=acnC;gene_synonym=ECK0331;gene_synonym=JW0325;gene_synonym=yahT;ec_number=4.2.1.79;note=GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=2-methylcitrate dehydratase;protein_id=AAC73437.1;db_xref=GI:1786528;db_xref=ASAP:ABE-0001152;db_xref=UniProtKB/Swiss-Prot:P77243;db_xref=EcoGene:EG13603 EMBL gene 352706 354592 . + . ID=.738;gene=prpE;locus_tag=b0335;gene_synonym=ECK0332;gene_synonym=JW0326;gene_synonym=yahU;db_xref=EcoGene:EG13604 EMBL CDS 352706 354592 . + 0 ID=.739;gene=prpE;locus_tag=b0335;gene_synonym=ECK0332;gene_synonym=JW0326;gene_synonym=yahU;function=putative enzyme%3B Not classified;note=putative propionyl-CoA synthetase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0019395 - fatty acid oxidation;codon_start=1;transl_table=11;product=propionate--CoA ligase;protein_id=AAC73438.1;db_xref=GI:1786529;db_xref=ASAP:ABE-0001154;db_xref=UniProtKB/Swiss-Prot:P77495;db_xref=EcoGene:EG13604 EMBL repeat_region 354599 354769 . + . ID=.740;note=REP26 (repetitive extragenic palindromic) element%3B contains 4 REP sequences EMBL gene 354922 356181 . + . ID=.741;gene=codB;locus_tag=b0336;gene_synonym=ECK0333;gene_synonym=JW0327;db_xref=EcoGene:EG11327 EMBL CDS 354922 356181 . + 0 ID=.742;gene=codB;locus_tag=b0336;gene_synonym=ECK0333;gene_synonym=JW0327;function=transport%3B Transport of small molecules: Nucleosides%2C purines%2C pyrimidines;note=cytosine permease/transport%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion;codon_start=1;transl_table=11;product=cytosine transporter;protein_id=AAC73439.1;db_xref=GI:1786530;db_xref=ASAP:ABE-0001159;db_xref=UniProtKB/Swiss-Prot:P0AA82;db_xref=EcoGene:EG11327 EMBL gene 356171 357454 . + . ID=.743;gene=codA;locus_tag=b0337;gene_synonym=ECK0334;gene_synonym=JW0328;db_xref=EcoGene:EG11326 EMBL CDS 356171 357454 . + 0 ID=.744;gene=codA;locus_tag=b0337;gene_synonym=ECK0334;gene_synonym=JW0328;ec_number=3.5.4.1;function=enzyme%3B Salvage of nucleosides and nucleotides;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion;codon_start=1;transl_table=11;product=cytosine/isoguanine deaminase;protein_id=AAC73440.1;db_xref=GI:1786531;db_xref=ASAP:ABE-0001161;db_xref=UniProtKB/Swiss-Prot:P25524;db_xref=EcoGene:EG11326 EMBL repeat_region 357484 357562 . + . ID=.745;note=REP27 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL repeat_region 357684 357762 . + . ID=.746;note=REP28 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 357791 358690 . - . ID=.747;gene=cynR;locus_tag=b0338;gene_synonym=ECK0335;gene_synonym=JW5894;db_xref=EcoGene:EG11421 EMBL CDS 357791 358690 . - 0 ID=.748;gene=cynR;locus_tag=b0338;gene_synonym=ECK0335;gene_synonym=JW5894;function=regulator%3B Central intermediary metabolism: Pool%2C multipurpose conversions;note=cyn operon positive regulator%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription%3B GO_process: GO:0006805 - xenobiotic metabolic process;codon_start=1;transl_table=11;product=transcriptional activator of cyn operon%3B autorepressor;protein_id=AAC73441.3;db_xref=GI:157672245;db_xref=ASAP:ABE-0001165;db_xref=UniProtKB/Swiss-Prot:P27111;db_xref=EcoGene:EG11421 EMBL gene 358799 359458 . + . ID=.749;gene=cynT;locus_tag=b0339;gene_synonym=ECK0336;gene_synonym=JW0330;db_xref=EcoGene:EG10176 EMBL CDS 358799 359458 . + 0 ID=.750;gene=cynT;locus_tag=b0339;gene_synonym=ECK0336;gene_synonym=JW0330;ec_number=4.2.1.1;function=enzyme%3B Central intermediary metabolism: Pool%2C multipurpose conversions;experiment=N-terminus verified by Edman degradation: PMID 1740425;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009440 - cyanate catabolic process%3B GO_process: GO:0006805 - xenobiotic metabolic process;codon_start=1;transl_table=11;product=carbonic anhydrase;protein_id=AAC73442.1;db_xref=GI:1786534;db_xref=ASAP:ABE-0001171;db_xref=UniProtKB/Swiss-Prot:P0ABE9;db_xref=EcoGene:EG10176 EMBL gene 359489 359959 . + . ID=.751;gene=cynS;locus_tag=b0340;gene_synonym=cnt;gene_synonym=ECK0337;gene_synonym=JW0331;db_xref=EcoGene:EG10175 EMBL CDS 359489 359959 . + 0 ID=.752;gene=cynS;locus_tag=b0340;gene_synonym=cnt;gene_synonym=ECK0337;gene_synonym=JW0331;ec_number=4.2.1.104;function=enzyme%3B Central intermediary metabolism: Pool%2C multipurpose conversions;experiment=N-terminus verified by Edman degradation: PMID 6336748;note=cyanate aminohydrolase%2C cyanase%3B GO_process: GO:0009440 - cyanate catabolic process%3B GO_process: GO:0006807 - nitrogen compound metabolic process%3B GO_process: GO:0006805 - xenobiotic metabolic process;codon_start=1;transl_table=11;product=cyanate aminohydrolase;protein_id=AAC73443.1;db_xref=GI:1786535;db_xref=ASAP:ABE-0001173;db_xref=UniProtKB/Swiss-Prot:P00816;db_xref=EcoGene:EG10175 EMBL gene 359992 361146 . + . ID=.753;gene=cynX;locus_tag=b0341;gene_synonym=ECK0338;gene_synonym=JW0332;db_xref=EcoGene:EG10177 EMBL CDS 359992 361146 . + 0 ID=.754;gene=cynX;locus_tag=b0341;gene_synonym=ECK0338;gene_synonym=JW0332;function=transport%3B Transport of small molecules: Anions;note=cyanate transport%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009440 - cyanate catabolic process%3B GO_process: GO:0006805 - xenobiotic metabolic process;codon_start=1;transl_table=11;product=putative cyanate transporter;protein_id=AAC73444.1;db_xref=GI:1786536;db_xref=ASAP:ABE-0001175;db_xref=UniProtKB/Swiss-Prot:P17583;db_xref=EcoGene:EG10177 EMBL repeat_region 361208 361236 . + . ID=.755;note=REP29 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 361249 361860 . - . ID=.756;gene=lacA;locus_tag=b0342;gene_synonym=ECK0339;gene_synonym=JW0333;db_xref=EcoGene:EG10524 EMBL CDS 361249 361860 . - 0 ID=.757;gene=lacA;locus_tag=b0342;gene_synonym=ECK0339;gene_synonym=JW0333;ec_number=2.3.1.18;function=enzyme%3B Degradation of small molecules: Carbon compounds;experiment=N-terminus verified by Edman degradation: PMID 3922433;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=thiogalactoside acetyltransferase;protein_id=AAC73445.1;db_xref=GI:1786537;db_xref=ASAP:ABE-0001177;db_xref=UniProtKB/Swiss-Prot:P07464;db_xref=EcoGene:EG10524 EMBL repeat_region 361883 361916 . + . ID=.758;note=REP30 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 361926 363179 . - . ID=.759;gene=lacY;locus_tag=b0343;gene_synonym=ECK0340;gene_synonym=JW0334;db_xref=EcoGene:EG10526 EMBL CDS 361926 363179 . - 0 ID=.760;gene=lacY;locus_tag=b0343;gene_synonym=ECK0340;gene_synonym=JW0334;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=galactoside permease (lactose permease%2C M protein) (MFS family)%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=lactose permease;protein_id=AAC73446.1;db_xref=GI:1786538;db_xref=ASAP:ABE-0001181;db_xref=UniProtKB/Swiss-Prot:P02920;db_xref=EcoGene:EG10526 EMBL gene 363231 366305 . - . ID=.761;gene=lacZ;locus_tag=b0344;gene_synonym=ECK0341;gene_synonym=JW0335;db_xref=EcoGene:EG10527 EMBL CDS 363231 366305 . - 0 ID=.762;gene=lacZ;locus_tag=b0344;gene_synonym=ECK0341;gene_synonym=JW0335;ec_number=3.2.1.23;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=beta-D-galactosidase;protein_id=AAC73447.1;db_xref=GI:1786539;db_xref=ASAP:ABE-0001183;db_xref=UniProtKB/Swiss-Prot:P00722;db_xref=EcoGene:EG10527 EMBL gene 366428 367510 . - . ID=.763;gene=lacI;locus_tag=b0345;gene_synonym=ECK0342;gene_synonym=JW0336;db_xref=EcoGene:EG10525 EMBL CDS 366428 367510 . - 0 ID=.764;gene=lacI;locus_tag=b0345;gene_synonym=ECK0342;gene_synonym=JW0336;function=regulator%3B Degradation of small molecules: Carbon compounds;experiment=N-terminus verified by Edman degradation: PMID 1107032%2C4554534%2C4557395%2C4571224;note=transcriptional repressor of the lac operon%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=lactose-inducible lac operon transcriptional repressor;protein_id=AAC73448.1;db_xref=GI:1786540;db_xref=ASAP:ABE-0001189;db_xref=UniProtKB/Swiss-Prot:P03023;db_xref=EcoGene:EG10525 EMBL gene 367587 368420 . - . ID=.765;gene=mhpR;locus_tag=b0346;gene_synonym=ECK0343;gene_synonym=JW0337;db_xref=EcoGene:EG20276 EMBL CDS 367587 368420 . - 0 ID=.766;gene=mhpR;locus_tag=b0346;gene_synonym=ECK0343;gene_synonym=JW0337;function=regulator%3B Not classified;experiment=N-terminus verified by Edman degradation: PMID 12748194;note=transcriptional regulator for mhp operon%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0019395 - fatty acid oxidation%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=mhp operon transcriptional activator;protein_id=AAC73449.2;db_xref=GI:145693096;db_xref=ASAP:ABE-0001191;db_xref=UniProtKB/Swiss-Prot:P77569;db_xref=EcoGene:EG20276 EMBL gene 368611 370275 . + . ID=.767;gene=mhpA;locus_tag=b0347;gene_synonym=ECK0344;gene_synonym=JW0338;db_xref=EcoGene:EG20273 EMBL CDS 368611 370275 . + 0 ID=.768;gene=mhpA;locus_tag=b0347;gene_synonym=ECK0344;gene_synonym=JW0338;ec_number=1.14.13.-;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=GO_process: GO:0019395 - fatty acid oxidation;codon_start=1;transl_table=11;product=3-(3-hydroxyphenyl)propionate hydroxylase;protein_id=AAC73450.1;db_xref=GI:1786543;db_xref=ASAP:ABE-0001196;db_xref=UniProtKB/Swiss-Prot:P77397;db_xref=EcoGene:EG20273 EMBL gene 370277 371221 . + . ID=.769;gene=mhpB;locus_tag=b0348;gene_synonym=ECK0345;gene_synonym=JW0339;db_xref=EcoGene:EG20274 EMBL CDS 370277 371221 . + 0 ID=.770;gene=mhpB;locus_tag=b0348;gene_synonym=ECK0345;gene_synonym=JW0339;ec_number=1.13.11.-;function=enzyme%3B Degradation of small molecules: Carbon compounds;experiment=N-terminus verified by Edman degradation: PMID 8399388;note=GO_process: GO:0019395 - fatty acid oxidation;codon_start=1;transl_table=11;product=2%2C3-dihydroxyphenylpropionate 1%2C2-dioxygenase;protein_id=AAC73451.1;db_xref=GI:1786544;db_xref=ASAP:ABE-0001198;db_xref=UniProtKB/Swiss-Prot:P0ABR9;db_xref=EcoGene:EG20274 EMBL gene 371239 372105 . + . ID=.771;gene=mhpC;locus_tag=b0349;gene_synonym=ECK0346;gene_synonym=JW0340;db_xref=EcoGene:EG20275 EMBL CDS 371239 372105 . + 0 ID=.772;gene=mhpC;locus_tag=b0349;gene_synonym=ECK0346;gene_synonym=JW0340;ec_number=3.7.1.-;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=GO_process: GO:0019395 - fatty acid oxidation;codon_start=1;transl_table=11;product=2-hydroxy-6-ketonona-2%2C4-dienedioic acid hydrolase;protein_id=AAC73452.3;db_xref=GI:452909625;db_xref=ASAP:ABE-0001201;db_xref=UniProtKB/Swiss-Prot:P77044;db_xref=EcoGene:EG20275 EMBL gene 372115 372924 . + . ID=.773;gene=mhpD;locus_tag=b0350;gene_synonym=ECK0347;gene_synonym=JW0341;gene_synonym=mhpS;db_xref=EcoGene:EG14274 EMBL CDS 372115 372924 . + 0 ID=.774;gene=mhpD;locus_tag=b0350;gene_synonym=ECK0347;gene_synonym=JW0341;gene_synonym=mhpS;ec_number=4.2.1.80;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=GO_process: GO:0019395 - fatty acid oxidation;codon_start=1;transl_table=11;product=2-keto-4-pentenoate hydratase;protein_id=AAC73453.2;db_xref=GI:87081722;db_xref=ASAP:ABE-0001205;db_xref=UniProtKB/Swiss-Prot:P77608;db_xref=EcoGene:EG14274 EMBL gene 372921 373871 . + . ID=.775;gene=mhpF;locus_tag=b0351;gene_synonym=ECK0348;gene_synonym=JW0342;db_xref=EcoGene:EG13625 EMBL CDS 372921 373871 . + 0 ID=.776;gene=mhpF;locus_tag=b0351;gene_synonym=ECK0348;gene_synonym=JW0342;ec_number=1.2.1.10;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=acetaldehyde dehydrogenase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0019395 - fatty acid oxidation;codon_start=1;transl_table=11;product=acetaldehyde-CoA dehydrogenase II%2C NAD-binding;protein_id=AAC73454.1;db_xref=GI:1786547;db_xref=ASAP:ABE-0001207;db_xref=UniProtKB/Swiss-Prot:P77580;db_xref=EcoGene:EG13625 EMBL gene 373868 374881 . + . ID=.777;gene=mhpE;locus_tag=b0352;gene_synonym=ECK0349;gene_synonym=JW0343;db_xref=EcoGene:EG13292 EMBL CDS 373868 374881 . + 0 ID=.778;gene=mhpE;locus_tag=b0352;gene_synonym=ECK0349;gene_synonym=JW0343;ec_number=4.1.3.-;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=4-hydroxy-2-ketovalerate aldolase%3B GO_process: GO:0019395 - fatty acid oxidation;codon_start=1;transl_table=11;product=4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase%2C class I;protein_id=AAC73455.1;db_xref=GI:1786548;db_xref=ASAP:ABE-0001209;db_xref=UniProtKB/Swiss-Prot:P51020;db_xref=EcoGene:EG13292 EMBL repeat_region 374930 375365 . + . ID=.779;note=REP31 (repetitive extragenic palindromic) element%3B contains 9 REP sequences EMBL gene 375459 376670 . + . ID=.780;gene=mhpT;locus_tag=b0353;gene_synonym=ECK0350;gene_synonym=JW5046;gene_synonym=yaiK;db_xref=EcoGene:EG13293 EMBL CDS 375459 376670 . + 0 ID=.781;gene=mhpT;locus_tag=b0353;gene_synonym=ECK0350;gene_synonym=JW5046;gene_synonym=yaiK;function=putative transport%3B Not classified;note=putative transport protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0019395 - fatty acid oxidation;codon_start=1;transl_table=11;product=3-hydroxyphenylpropionic transporter;protein_id=AAC73456.2;db_xref=GI:87081723;db_xref=ASAP:ABE-0001213;db_xref=UniProtKB/Swiss-Prot:P77589;db_xref=EcoGene:EG13293 EMBL gene 376772 377311 . + . ID=.782;gene=yaiL;locus_tag=b0354;gene_synonym=ECK0351;gene_synonym=JW0345;db_xref=EcoGene:EG13294 EMBL CDS 376772 377311 . + 0 ID=.783;gene=yaiL;locus_tag=b0354;gene_synonym=ECK0351;gene_synonym=JW0345;function=putative enzyme%3B Not classified;note=GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=DUF2058 family protein;protein_id=AAC73457.2;db_xref=GI:87081724;db_xref=ASAP:ABE-0001216;db_xref=UniProtKB/Swiss-Prot:P51024;db_xref=EcoGene:EG13294 EMBL repeat_region 377335 377521 . + . ID=.784;note=REP32 (repetitive extragenic palindromic) element%3B contains 4 REP sequences EMBL gene 377535 378368 . - . ID=.785;gene=frmB;locus_tag=b0355;gene_synonym=ECK0352;gene_synonym=JW0346;gene_synonym=yaiM;db_xref=EcoGene:EG13295 EMBL CDS 377535 378368 . - 0 ID=.786;gene=frmB;locus_tag=b0355;gene_synonym=ECK0352;gene_synonym=JW0346;gene_synonym=yaiM;function=enzyme%3B Formaldehyde degradation;note=putative S-formylglutathione hydrolase;codon_start=1;transl_table=11;product=S-formylglutathione hydrolase;protein_id=AAC73458.1;db_xref=GI:1786551;db_xref=ASAP:ABE-0001219;db_xref=UniProtKB/Swiss-Prot:P51025;db_xref=EcoGene:EG13295 EMBL gene 378462 379571 . - . ID=.787;gene=frmA;locus_tag=b0356;gene_synonym=adhC;gene_synonym=ECK0353;gene_synonym=JW0347;db_xref=EcoGene:EG50010 EMBL CDS 378462 379571 . - 0 ID=.788;gene=frmA;locus_tag=b0356;gene_synonym=adhC;gene_synonym=ECK0353;gene_synonym=JW0347;ec_number=1.1.1.1;ec_number=1.1.1.284;function=enzyme%3B Energy metabolism%2C carbon: Fermentation;experiment=N-terminus verified by Edman degradation: PMID 1731906;note=alcohol dehydrogenase class III%3B formaldehyde dehydrogenase%2C glutathione-dependent%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006113 - fermentation;codon_start=1;transl_table=11;product=alcohol dehydrogenase class III%3B glutathione-dependent formaldehyde dehydrogenase;protein_id=AAC73459.1;db_xref=GI:1786552;db_xref=ASAP:ABE-0001221;db_xref=UniProtKB/Swiss-Prot:P25437;db_xref=EcoGene:EG50010 EMBL gene 379606 379881 . - . ID=.789;gene=frmR;locus_tag=b0357;gene_synonym=ECK0354;gene_synonym=JW0348;gene_synonym=yaiN;db_xref=EcoGene:EG13296 EMBL CDS 379606 379881 . - 0 ID=.790;gene=frmR;locus_tag=b0357;gene_synonym=ECK0354;gene_synonym=JW0348;gene_synonym=yaiN;note=repressor of frmRAB;codon_start=1;transl_table=11;product=regulator protein that represses frmRAB operon;protein_id=AAC73460.2;db_xref=GI:87081725;db_xref=ASAP:ABE-0001226;db_xref=UniProtKB/Swiss-Prot:P0AAP3;db_xref=EcoGene:EG13296 EMBL gene 380069 380842 . - . ID=.791;gene=yaiO;locus_tag=b0358;gene_synonym=ECK0355;gene_synonym=JW0349;db_xref=EcoGene:EG13297 EMBL CDS 380069 380842 . - 0 ID=.792;gene=yaiO;locus_tag=b0358;gene_synonym=ECK0355;gene_synonym=JW0349;codon_start=1;transl_table=11;product=outer membrane protein;protein_id=AAC73461.1;db_xref=GI:1786555;db_xref=ASAP:ABE-0001230;db_xref=UniProtKB/Swiss-Prot:Q47534;db_xref=EcoGene:EG13297 EMBL biological_region 380844 382872 . - . ID=.793;featflags=type:gene;gene=yaiX;locus_tag=b4579;gene_synonym=ECK0356;gene_synonym=JW0350;gene_synonym=yaiF;pseudo=true;db_xref=EcoGene:EG14236 EMBL gene 380844 381260 . - . Parent=.793 EMBL gene 382591 382872 . - . Parent=.793 EMBL biological_region 380844 382872 . - 0 ID=.796;featflags=type:CDS;gene=yaiX;locus_tag=b4579;gene_synonym=ECK0356;gene_synonym=JW0350;gene_synonym=yaiF;note=pseudogene%2C interrupted by IS2A%3B hexapeptide transferase superfamily%3B putative transferase;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0001232;db_xref=ASAP:ABE-0001241;db_xref=ASAP:ABE-0285111;db_xref=UniProtKB/Swiss-Prot:P75697;db_xref=EcoGene:EG14236 EMBL CDS 380844 381260 . - 0 Parent=.796 EMBL CDS 382591 382872 . - 0 Parent=.796 EMBL sequence_feature 381260 382590 . + . ID=.799;note=*mobile_element_type: insertion sequence:IS2A EMBL gene 381351 381716 . + . ID=.800;gene=insC1;locus_tag=b0360;gene_synonym=ECK0357;db_xref=EcoGene:EG40003 EMBL CDS 381351 381716 . + 0 ID=.801;gene=insC1;locus_tag=b0360;gene_synonym=ECK0357;function=IS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;codon_start=1;transl_table=11;product=IS2 repressor TnpA;protein_id=AAC73463.2;db_xref=GI:145693097;db_xref=ASAP:ABE-0001237;db_xref=UniProtKB/Swiss-Prot:P0CF40;db_xref=EcoGene:EG40003 EMBL gene 381674 382579 . + . ID=.802;gene=insD1;locus_tag=b0361;gene_synonym=ECK0358;db_xref=EcoGene:EG40004 EMBL CDS 381674 382579 . + 0 ID=.803;gene=insD1;locus_tag=b0361;gene_synonym=ECK0358;function=IS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;codon_start=1;transl_table=11;product=IS2 transposase TnpB;protein_id=AAC73464.1;db_xref=GI:1786558;db_xref=ASAP:ABE-0001239;db_xref=UniProtKB/Swiss-Prot:P0CF53;db_xref=EcoGene:EG40004 EMBL gene 382739 383935 . - . ID=.804;gene=yaiP;locus_tag=b0363;gene_synonym=ECK0360;gene_synonym=JW0355;db_xref=EcoGene:EG13298 EMBL CDS 382739 383935 . - 0 ID=.805;gene=yaiP;locus_tag=b0363;gene_synonym=ECK0360;gene_synonym=JW0355;function=putative enzyme%3B Not classified;note=polysaccharide metabolism%3B GO_process: GO:0000271 - polysaccharide biosynthetic process;codon_start=1;transl_table=11;product=putative family 2 glycosyltransferase;protein_id=AAC73466.1;db_xref=GI:1786560;db_xref=ASAP:ABE-0001243;db_xref=UniProtKB/Swiss-Prot:Q47536;db_xref=EcoGene:EG13298 EMBL gene 384059 384616 . - . ID=.806;gene=yaiS;locus_tag=b0364;gene_synonym=ECK0361;gene_synonym=JW0356;db_xref=EcoGene:EG13302 EMBL CDS 384059 384616 . - 0 ID=.807;gene=yaiS;locus_tag=b0364;gene_synonym=ECK0361;gene_synonym=JW0356;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=putative PIG-L family deacetylase;protein_id=AAC73467.2;db_xref=GI:87081726;db_xref=ASAP:ABE-0001249;db_xref=UniProtKB/Swiss-Prot:P71311;db_xref=EcoGene:EG13302 EMBL gene 385232 386194 . + . ID=.808;gene=tauA;locus_tag=b0365;gene_synonym=ECK0362;gene_synonym=JW0357;gene_synonym=ssiA;gene_synonym=yaiR;db_xref=EcoGene:EG13300 EMBL CDS 385232 386194 . + 0 ID=.809;gene=tauA;locus_tag=b0365;gene_synonym=ECK0362;gene_synonym=JW0357;gene_synonym=ssiA;gene_synonym=yaiR;function=transport%3B Transport of small molecules: Amino acids%2C amines;note=taurine transport system periplasmic protein%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0006790 - sulfur metabolic process%3B GO_process: GO:0009310 - amine catabolic process;codon_start=1;transl_table=11;product=taurine ABC transporter periplasmic binding protein;protein_id=AAC73468.2;db_xref=GI:87081727;db_xref=ASAP:ABE-0001256;db_xref=UniProtKB/Swiss-Prot:Q47537;db_xref=EcoGene:EG13300 EMBL gene 386207 386974 . + . ID=.810;gene=tauB;locus_tag=b0366;gene_synonym=ECK0363;gene_synonym=JW0358;gene_synonym=ssiB;gene_synonym=yaiQ;db_xref=EcoGene:EG13299 EMBL CDS 386207 386974 . + 0 ID=.811;gene=tauB;locus_tag=b0366;gene_synonym=ECK0363;gene_synonym=JW0358;gene_synonym=ssiB;gene_synonym=yaiQ;function=transport%3B Transport of small molecules: Amino acids%2C amines;note=taurine ATP-binding component of a transport system%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006790 - sulfur metabolic process%3B GO_process: GO:0009310 - amine catabolic process;codon_start=1;transl_table=11;product=taurine ABC transporter ATPase;protein_id=AAC73469.1;db_xref=GI:1786563;db_xref=ASAP:ABE-0001259;db_xref=UniProtKB/Swiss-Prot:Q47538;db_xref=EcoGene:EG13299 EMBL gene 386971 387798 . + . ID=.812;gene=tauC;locus_tag=b0367;gene_synonym=ECK0364;gene_synonym=JW0359;gene_synonym=ssiC;gene_synonym=yaiJ;db_xref=EcoGene:EG13301 EMBL CDS 386971 387798 . + 0 ID=.813;gene=tauC;locus_tag=b0367;gene_synonym=ECK0364;gene_synonym=JW0359;gene_synonym=ssiC;gene_synonym=yaiJ;function=transport%3B Transport of small molecules: Amino acids%2C amines;note=taurine transport system permease protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006790 - sulfur metabolic process%3B GO_process: GO:0009310 - amine catabolic process;codon_start=1;transl_table=11;product=taurine ABC transporter permease;protein_id=AAC73470.1;db_xref=GI:1786564;db_xref=ASAP:ABE-0001261;db_xref=UniProtKB/Swiss-Prot:Q47539;db_xref=EcoGene:EG13301 EMBL gene 387795 388646 . + . ID=.814;gene=tauD;locus_tag=b0368;gene_synonym=ECK0365;gene_synonym=JW0360;gene_synonym=ssiD;gene_synonym=yaiG;db_xref=EcoGene:EG12423 EMBL CDS 387795 388646 . + 0 ID=.815;gene=tauD;locus_tag=b0368;gene_synonym=ECK0365;gene_synonym=JW0360;gene_synonym=ssiD;gene_synonym=yaiG;ec_number=1.14.11.17;function=putative enzyme%3B Not classified;note=GO_process: GO:0009310 - amine catabolic process%3B GO_process: GO:0006790 - sulfur metabolic process;codon_start=1;transl_table=11;product=taurine dioxygenase%2C 2-oxoglutarate-dependent;protein_id=AAC73471.1;db_xref=GI:1786565;db_xref=ASAP:ABE-0001263;db_xref=UniProtKB/Swiss-Prot:P37610;db_xref=EcoGene:EG12423 EMBL gene 388753 389727 . - . ID=.816;gene=hemB;locus_tag=b0369;gene_synonym=ECK0366;gene_synonym=JW0361;gene_synonym=ncf;db_xref=EcoGene:EG10428 EMBL CDS 388753 389727 . - 0 ID=.817;gene=hemB;locus_tag=b0369;gene_synonym=ECK0366;gene_synonym=JW0361;gene_synonym=ncf;ec_number=4.2.1.24;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Heme%2C porphyrin;note=5-aminolevulinate dehydratase %3D porphobilinogen synthase;codon_start=1;transl_table=11;product=5-aminolevulinate dehydratase (porphobilinogen synthase);protein_id=AAC73472.2;db_xref=GI:87081728;db_xref=ASAP:ABE-0001266;db_xref=UniProtKB/Swiss-Prot:P0ACB2;db_xref=EcoGene:EG10428 EMBL biological_region 390251 394418 . + . ID=.818;featflags=type:gene;gene=yaiT;locus_tag=b4580;gene_synonym=ECK0368;gene_synonym=JW0362;gene_synonym=yaiU;pseudo=true;db_xref=EcoGene:EG13605 EMBL gene 390251 391708 . + . Parent=.818 EMBL gene 392970 394418 . + . Parent=.818 EMBL biological_region 390251 394418 . + 0 ID=.821;featflags=type:CDS;gene=yaiT;locus_tag=b4580;gene_synonym=ECK0368;gene_synonym=JW0362;gene_synonym=yaiU;note=pseudogene%2C autotransporter family%3Bputative structure%3B Not classified%3B interrupted by IS3%3B putative flagellin structural protein;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0001274;db_xref=ASAP:ABE-0001288;db_xref=ASAP:ABE-0285112;db_xref=UniProtKB/Swiss-Prot:P77199;db_xref=EcoGene:EG13605 EMBL CDS 390251 391708 . + 0 Parent=.821 EMBL CDS 392970 394418 . + 0 Parent=.821 EMBL sequence_feature 391709 392966 . - . ID=.824;note=*mobile_element_type: insertion sequence:IS3B EMBL gene 391739 392605 . - . ID=.825;gene=insF1;locus_tag=b0372;gene_synonym=ECK0299;db_xref=EcoGene:EG40006 EMBL CDS 391739 392605 . - 0 ID=.826;gene=insF1;locus_tag=b0372;gene_synonym=ECK0299;function=IS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;codon_start=1;transl_table=11;product=IS3 transposase B;protein_id=AAC73475.1;db_xref=GI:1786570;db_xref=ASAP:ABE-0001277;db_xref=UniProtKB/Swiss-Prot:P0CF80;db_xref=EcoGene:EG40006 EMBL gene 392602 392901 . - . ID=.827;gene=insE1;locus_tag=b0373;gene_synonym=ECK0298;db_xref=EcoGene:EG40005 EMBL CDS 392602 392901 . - 0 ID=.828;gene=insE1;locus_tag=b0373;gene_synonym=ECK0298;function=IS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;codon_start=1;transl_table=11;product=IS3 transposase A;protein_id=AAC73476.2;db_xref=GI:226510928;db_xref=ASAP:ABE-0001279;db_xref=UniProtKB/Swiss-Prot:P0CF67;db_xref=EcoGene:EG40005 EMBL gene 394506 395129 . + . ID=.829;gene=yaiV;locus_tag=b0375;gene_synonym=ECK0370;gene_synonym=JW0366;db_xref=EcoGene:EG13607 EMBL CDS 394506 395129 . + 0 ID=.830;gene=yaiV;locus_tag=b0375;gene_synonym=ECK0370;gene_synonym=JW0366;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane;codon_start=1;transl_table=11;product=putative transcriptional regulator;protein_id=AAC73478.2;db_xref=GI:226510929;db_xref=ASAP:ABE-0001290;db_xref=UniProtKB/Swiss-Prot:P0AAP5;db_xref=EcoGene:EG13607 EMBL gene 395130 396287 . - . ID=.831;gene=ampH;locus_tag=b0376;gene_synonym=ECK0371;gene_synonym=JW5052;gene_synonym=yaiH;db_xref=EcoGene:EG12867 EMBL CDS 395130 396287 . - 0 ID=.832;gene=ampH;locus_tag=b0376;gene_synonym=ECK0371;gene_synonym=JW5052;gene_synonym=yaiH;ec_number=3.4.17.8;ec_number=3.5.2.6;function=enzyme%3B Murein recycling;note=GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=D-alanyl-D-alanine- carboxypeptidase/endopeptidase%3B penicillin-binding protein%3B weak beta-lactamase;protein_id=AAC73479.1;db_xref=GI:1786574;db_xref=ASAP:ABE-0001292;db_xref=UniProtKB/Swiss-Prot:P0AD70;db_xref=EcoGene:EG12867 EMBL gene 396639 397859 . + . ID=.833;gene=sbmA;locus_tag=b0377;gene_synonym=ECK0372;gene_synonym=JW0368;db_xref=EcoGene:EG10928 EMBL CDS 396639 397859 . + 0 ID=.834;gene=sbmA;locus_tag=b0377;gene_synonym=ECK0372;gene_synonym=JW0368;function=putative membrane%3B Drug/analog sensitivity;note=sensitivity to microcin B17%2C possibly envelop protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=peptide antibiotic transporter;protein_id=AAC73480.1;db_xref=GI:1786575;db_xref=ASAP:ABE-0001297;db_xref=UniProtKB/Swiss-Prot:P0AFY6;db_xref=EcoGene:EG10928 EMBL gene 397872 398966 . + . ID=.835;gene=yaiW;locus_tag=b0378;gene_synonym=ECK0373;gene_synonym=JW0369;db_xref=EcoGene:EG13608 EMBL CDS 397872 398966 . + 0 ID=.836;gene=yaiW;locus_tag=b0378;gene_synonym=ECK0373;gene_synonym=JW0369;codon_start=1;transl_table=11;product=microcin Bac7 uptake protein%3B outer membrane surface-exposed lipoprotein;protein_id=AAC73481.1;db_xref=GI:1786576;db_xref=ASAP:ABE-0001299;db_xref=UniProtKB/Swiss-Prot:P77562;db_xref=EcoGene:EG13608 EMBL repeat_region 398980 399014 . + . ID=.837;note=REP33 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 399025 399333 . - . ID=.838;gene=yaiY;locus_tag=b0379;gene_synonym=ECK0374;gene_synonym=JW0370;db_xref=EcoGene:EG14279 EMBL CDS 399025 399333 . - 0 ID=.839;gene=yaiY;locus_tag=b0379;gene_synonym=ECK0374;gene_synonym=JW0370;codon_start=1;transl_table=11;product=DUF2755 family inner membrane protein;protein_id=AAC73482.1;db_xref=GI:1786577;db_xref=ASAP:ABE-0001302;db_xref=UniProtKB/Swiss-Prot:P0AAP7;db_xref=EcoGene:EG14279 EMBL gene 399593 399805 . + . ID=.840;gene=yaiZ;locus_tag=b0380;gene_synonym=ECK0375;gene_synonym=JW5053;db_xref=EcoGene:EG14280 EMBL CDS 399593 399805 . + 0 ID=.841;gene=yaiZ;locus_tag=b0380;gene_synonym=ECK0375;gene_synonym=JW5053;codon_start=1;transl_table=11;product=DUF2754 family putative inner membrane protein;protein_id=AAC73483.2;db_xref=GI:87081730;db_xref=ASAP:ABE-0001307;db_xref=UniProtKB/Swiss-Prot:P0AAQ0;db_xref=EcoGene:EG14280 EMBL gene 399829 400923 . - . ID=.842;gene=ddlA;locus_tag=b0381;gene_synonym=ECK0376;gene_synonym=JW0372;db_xref=EcoGene:EG10213 EMBL CDS 399829 400923 . - 0 ID=.843;gene=ddlA;locus_tag=b0381;gene_synonym=ECK0376;gene_synonym=JW0372;ec_number=6.3.2.4;function=enzyme%3B Murein sacculus%2C peptidoglycan;experiment=N-terminus verified by Edman degradation: PMID 1993184;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009252 - peptidoglycan biosynthetic process;codon_start=1;transl_table=11;product=D-alanine-D-alanine ligase A;protein_id=AAC73484.1;db_xref=GI:1786579;db_xref=ASAP:ABE-0001309;db_xref=UniProtKB/Swiss-Prot:P0A6J8;db_xref=EcoGene:EG10213 EMBL gene 401386 401646 . + . ID=.844;gene=iraP;locus_tag=b0382;gene_synonym=ECK0377;gene_synonym=JW0373;gene_synonym=yaiB;db_xref=EcoGene:EG11256 EMBL CDS 401386 401646 . + 0 ID=.845;gene=iraP;locus_tag=b0382;gene_synonym=ECK0377;gene_synonym=JW0373;gene_synonym=yaiB;codon_start=1;transl_table=11;product=anti-RssB factor%2C RpoS stabilzer during Pi starvation%3B anti-adapter protein;protein_id=AAC73485.1;db_xref=GI:1786581;db_xref=ASAP:ABE-0001313;db_xref=UniProtKB/Swiss-Prot:P0AAN9;db_xref=EcoGene:EG11256 EMBL gene 401747 403162 . + . ID=.846;gene=phoA;locus_tag=b0383;gene_synonym=ECK0378;gene_synonym=JW0374;gene_synonym=psiA;db_xref=EcoGene:EG10727 EMBL CDS 401747 403162 . + 0 ID=.847;gene=phoA;locus_tag=b0383;gene_synonym=ECK0378;gene_synonym=JW0374;gene_synonym=psiA;ec_number=3.1.3.1;function=enzyme%3B Central intermediary metabolism: Phosphorus compounds;note=alkaline phosphatase%3B start codon corrected%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0006793 - phosphorus metabolic process;codon_start=1;transl_table=11;product=bacterial alkaline phosphatase;protein_id=AAC73486.2;db_xref=GI:48994877;db_xref=ASAP:ABE-0001328;db_xref=UniProtKB/Swiss-Prot:P00634;db_xref=EcoGene:EG10727 EMBL gene 403281 403601 . + . ID=.848;gene=psiF;locus_tag=b0384;gene_synonym=ECK0379;gene_synonym=JW5054;db_xref=EcoGene:EG11401 EMBL CDS 403281 403601 . + 0 ID=.849;gene=psiF;locus_tag=b0384;gene_synonym=ECK0379;gene_synonym=JW5054;function=phenotype%3B Central intermediary metabolism: Phosphorus compounds;note=induced by phosphate starvation%3B GO_process: GO:0006793 - phosphorus metabolic process%3B GO_process: GO:0042594 - response to starvation;codon_start=1;transl_table=11;product=PsiF family protein;protein_id=AAC73487.2;db_xref=GI:87081731;db_xref=ASAP:ABE-0001330;db_xref=UniProtKB/Swiss-Prot:P0AFM4;db_xref=EcoGene:EG11401 EMBL gene 403703 404818 . + . ID=.850;gene=yaiC;locus_tag=b0385;gene_synonym=adrA;gene_synonym=ECK0380;gene_synonym=JW0376;db_xref=EcoGene:EG11257 EMBL CDS 403703 404818 . + 0 ID=.851;gene=yaiC;locus_tag=b0385;gene_synonym=adrA;gene_synonym=ECK0380;gene_synonym=JW0376;codon_start=1;transl_table=11;product=diguanylate cyclase%2C cellulose regualtor;protein_id=AAC73488.1;db_xref=GI:1786584;db_xref=ASAP:ABE-0001336;db_xref=UniProtKB/Swiss-Prot:P0AAP1;db_xref=EcoGene:EG11257 EMBL gene 404835 405644 . - . ID=.852;gene=proC;locus_tag=b0386;gene_synonym=ECK0381;gene_synonym=JW0377;gene_synonym=pro;gene_synonym=Pro2;db_xref=EcoGene:EG10769 EMBL CDS 404835 405644 . - 0 ID=.853;gene=proC;locus_tag=b0386;gene_synonym=ECK0381;gene_synonym=JW0377;gene_synonym=pro;gene_synonym=Pro2;ec_number=1.5.1.2;function=enzyme%3B Amino acid biosynthesis: Proline;experiment=N-terminus verified by Edman degradation: PMID 6089111;note=pyrroline-5-carboxylate reductase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006561 - proline biosynthetic process;codon_start=1;transl_table=11;product=pyrroline-5-carboxylate reductase%2C NAD(P)-binding;protein_id=AAC73489.1;db_xref=GI:1786585;db_xref=ASAP:ABE-0001338;db_xref=UniProtKB/Swiss-Prot:P0A9L8;db_xref=EcoGene:EG10769 EMBL gene 405764 406222 . + . ID=.854;gene=yaiI;locus_tag=b0387;gene_synonym=ECK0382;gene_synonym=JW0378;db_xref=EcoGene:EG13176 EMBL CDS 405764 406222 . + 0 ID=.855;gene=yaiI;locus_tag=b0387;gene_synonym=ECK0382;gene_synonym=JW0378;codon_start=1;transl_table=11;product=UPF0178 family protein;protein_id=AAC73490.2;db_xref=GI:87081732;db_xref=ASAP:ABE-0001344;db_xref=UniProtKB/Swiss-Prot:P0A8D3;db_xref=EcoGene:EG13176 EMBL gene 406405 406929 . + . ID=.856;gene=aroL;locus_tag=b0388;gene_synonym=ECK0383;gene_synonym=JW0379;db_xref=EcoGene:EG10082 EMBL CDS 406405 406929 . + 0 ID=.857;gene=aroL;locus_tag=b0388;gene_synonym=ECK0383;gene_synonym=JW0379;ec_number=2.7.1.71;function=enzyme%3B Amino acid biosynthesis: Chorismate;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009423 - chorismate biosynthetic process;codon_start=1;transl_table=11;product=shikimate kinase II;protein_id=AAC73491.1;db_xref=GI:1786587;db_xref=ASAP:ABE-0001353;db_xref=UniProtKB/Swiss-Prot:P0A6E1;db_xref=EcoGene:EG10082 EMBL gene 406979 407170 . + . ID=.858;gene=yaiA;locus_tag=b0389;gene_synonym=ECK0384;gene_synonym=JW0380;db_xref=EcoGene:EG11093 EMBL CDS 406979 407170 . + 0 ID=.859;gene=yaiA;locus_tag=b0389;gene_synonym=ECK0384;gene_synonym=JW0380;codon_start=1;transl_table=11;product=OxyR-regulated conserved protein;protein_id=AAC73492.1;db_xref=GI:1786588;db_xref=ASAP:ABE-0001355;db_xref=UniProtKB/Swiss-Prot:P0AAN5;db_xref=EcoGene:EG11093 EMBL gene 407428 408105 . + . ID=.860;gene=aroM;locus_tag=b0390;gene_synonym=ECK0385;gene_synonym=JW0381;db_xref=EcoGene:EG10083 EMBL CDS 407428 408105 . + 0 ID=.861;gene=aroM;locus_tag=b0390;gene_synonym=ECK0385;gene_synonym=JW0381;note=protein of aro operon%2C regulated by aroR;codon_start=1;transl_table=11;product=AroM family protein;protein_id=AAC73493.1;db_xref=GI:1786589;db_xref=ASAP:ABE-0001357;db_xref=UniProtKB/Swiss-Prot:P0AE28;db_xref=EcoGene:EG10083 EMBL gene 408177 408461 . + . ID=.862;gene=yaiE;locus_tag=b0391;gene_synonym=ECK0386;gene_synonym=JW0382;db_xref=EcoGene:EG12159 EMBL CDS 408177 408461 . + 0 ID=.863;gene=yaiE;locus_tag=b0391;gene_synonym=ECK0386;gene_synonym=JW0382;codon_start=1;transl_table=11;product=UPF0345 family protein;protein_id=AAC73494.1;db_xref=GI:1786590;db_xref=ASAP:ABE-0001360;db_xref=UniProtKB/Swiss-Prot:P0C037;db_xref=EcoGene:EG12159 EMBL gene 408609 408950 . + . ID=.864;gene=ykiA;locus_tag=b0392;gene_synonym=ECK0387;gene_synonym=JW0383;pseudo=true;db_xref=EcoGene:EG14282 EMBL CDS 408609 408950 . + 0 ID=.865;gene=ykiA;locus_tag=b0392;gene_synonym=ECK0387;gene_synonym=JW0383;note=pseudogene;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0001363;db_xref=UniProtKB/Swiss-Prot:P75704;db_xref=EcoGene:EG14282 EMBL repeat_region 409052 409088 . + . ID=.866;note=REP34 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 409108 410019 . - . ID=.867;gene=rdgC;locus_tag=b0393;gene_synonym=ECK0388;gene_synonym=JW0384;gene_synonym=yaiD;db_xref=EcoGene:EG12158 EMBL CDS 409108 410019 . - 0 ID=.868;gene=rdgC;locus_tag=b0393;gene_synonym=ECK0388;gene_synonym=JW0384;gene_synonym=yaiD;experiment=N-terminus verified by Edman degradation: PMID 10368163;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006261 - DNA-dependent DNA replication;codon_start=1;transl_table=11;product=nucleoid-associated ssDNA and dsDNA binding protein%3B competitive inhibitor of RecA function;protein_id=AAC73496.1;db_xref=GI:1786592;db_xref=ASAP:ABE-0001366;db_xref=UniProtKB/Swiss-Prot:P36767;db_xref=EcoGene:EG12158 EMBL gene 410144 411052 . + . ID=.869;gene=mak;locus_tag=b0394;gene_synonym=ECK0389;gene_synonym=JW0385;gene_synonym=yajF;db_xref=EcoGene:EG11288 EMBL CDS 410144 411052 . + 0 ID=.870;gene=mak;locus_tag=b0394;gene_synonym=ECK0389;gene_synonym=JW0385;gene_synonym=yajF;ec_number=2.7.1.4;function=putative regulator%3B Not classified;note=possible NAGC-like transcriptional regulator%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=manno(fructo)kinase;protein_id=AAC73497.2;db_xref=GI:87081733;db_xref=ASAP:ABE-0001372;db_xref=UniProtKB/Swiss-Prot:P23917;db_xref=EcoGene:EG11288 EMBL repeat_region 411078 411268 . + . ID=.871;note=REP35 (repetitive extragenic palindromic) element%3B contains 4 REP sequences EMBL gene 411297 412481 . - . ID=.872;gene=araJ;locus_tag=b0396;gene_synonym=ECK0390;gene_synonym=JW0386;db_xref=EcoGene:EG10060 EMBL CDS 411297 412481 . - 0 ID=.873;gene=araJ;locus_tag=b0396;gene_synonym=ECK0390;gene_synonym=JW0386;function=transport%3B Degradation of small molecules: Carbon compounds;note=involved in either transport or processing of arabinose polymers%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=L-arabinose-inducible putative transporter%2C MFS family;protein_id=AAC73499.1;db_xref=GI:1786595;db_xref=ASAP:ABE-0001378;db_xref=UniProtKB/Swiss-Prot:P23910;db_xref=EcoGene:EG10060 EMBL gene 412607 415753 . - . ID=.874;gene=sbcC;locus_tag=b0397;gene_synonym=ECK0391;gene_synonym=JW0387;gene_synonym=rmuA;db_xref=EcoGene:EG10927 EMBL CDS 412607 415753 . - 0 ID=.875;gene=sbcC;locus_tag=b0397;gene_synonym=ECK0391;gene_synonym=JW0387;gene_synonym=rmuA;function=enzyme%3B Degradation of DNA;experiment=N-terminus verified by Edman degradation: PMID 9242643;note=ATP-dependent dsDNA exonuclease%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006308 - DNA catabolic process;codon_start=1;transl_table=11;product=exonuclease%2C dsDNA%2C ATP-dependent;protein_id=AAC73500.1;db_xref=GI:1786597;db_xref=ASAP:ABE-0001381;db_xref=UniProtKB/Swiss-Prot:P13458;db_xref=EcoGene:EG10927 EMBL gene 415750 416952 . - . ID=.876;gene=sbcD;locus_tag=b0398;gene_synonym=ECK0392;gene_synonym=JW0388;gene_synonym=yajA;db_xref=EcoGene:EG11094 EMBL CDS 415750 416952 . - 0 ID=.877;gene=sbcD;locus_tag=b0398;gene_synonym=ECK0392;gene_synonym=JW0388;gene_synonym=yajA;function=enzyme%3B Degradation of DNA;experiment=N-terminus verified by Edman degradation: PMID 9242643;note=ATP-dependent dsDNA exonuclease%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006308 - DNA catabolic process;codon_start=1;transl_table=11;product=exonuclease%2C dsDNA%2C ATP-dependent;protein_id=AAC73501.1;db_xref=GI:1786598;db_xref=ASAP:ABE-0001383;db_xref=UniProtKB/Swiss-Prot:P0AG76;db_xref=EcoGene:EG11094 EMBL gene 417142 417831 . + . ID=.878;gene=phoB;locus_tag=b0399;gene_synonym=ECK0393;gene_synonym=JW0389;gene_synonym=phoRc;db_xref=EcoGene:EG10728 EMBL CDS 417142 417831 . + 0 ID=.879;gene=phoB;locus_tag=b0399;gene_synonym=ECK0393;gene_synonym=JW0389;gene_synonym=phoRc;function=regulator%3B Global regulatory functions;note=positive response regulator for pho regulon%2C sensor is PhoR (or CreC)%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0006793 - phosphorus metabolic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=response regulator in two-component regulatory system with PhoR;protein_id=AAC73502.1;db_xref=GI:1786599;db_xref=ASAP:ABE-0001389;db_xref=UniProtKB/Swiss-Prot:P0AFJ5;db_xref=EcoGene:EG10728 EMBL gene 417889 419184 . + . ID=.880;gene=phoR;locus_tag=b0400;gene_synonym=ECK0394;gene_synonym=JW0390;gene_synonym=nmpB;gene_synonym=phoR1;gene_synonym=R1pho;db_xref=EcoGene:EG10733 EMBL CDS 417889 419184 . + 0 ID=.881;gene=phoR;locus_tag=b0400;gene_synonym=ECK0394;gene_synonym=JW0390;gene_synonym=nmpB;gene_synonym=phoR1;gene_synonym=R1pho;ec_number=2.7.3.-;function=enzyme%3B Global regulatory functions;note=positive and negative sensor protein for pho regulon%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006793 - phosphorus metabolic process%3B GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=sensory histidine kinase in two-component regulatory system with PhoB;protein_id=AAC73503.1;db_xref=GI:1786600;db_xref=ASAP:ABE-0001391;db_xref=UniProtKB/Swiss-Prot:P08400;db_xref=EcoGene:EG10733 EMBL gene 419591 420910 . + . ID=.882;gene=brnQ;locus_tag=b0401;gene_synonym=ECK0395;gene_synonym=hrbA;gene_synonym=JW0391;db_xref=EcoGene:EG12168 EMBL CDS 419591 420910 . + 0 ID=.883;gene=brnQ;locus_tag=b0401;gene_synonym=ECK0395;gene_synonym=hrbA;gene_synonym=JW0391;function=transport%3B Transport of small molecules: Amino acids%2C amines;note=branched chain amino acid transport system II carrier protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009098 - leucine biosynthetic process%3B GO_process: GO:0009063 - cellular amino acid catabolic process;codon_start=1;transl_table=11;product=branched-chain amino acid transport system 2 carrier protein%3B LIV-II transport system for Ile%2C Leu%2C and Val;protein_id=AAC73504.1;db_xref=GI:1786601;db_xref=ASAP:ABE-0001394;db_xref=UniProtKB/Swiss-Prot:P0AD99;db_xref=EcoGene:EG12168 EMBL gene 420986 422359 . + . ID=.884;gene=proY;locus_tag=b0402;gene_synonym=ECK0396;gene_synonym=hisY;gene_synonym=JW5055;gene_synonym=yajM;db_xref=EcoGene:EG13609 EMBL CDS 420986 422359 . + 0 ID=.885;gene=proY;locus_tag=b0402;gene_synonym=ECK0396;gene_synonym=hisY;gene_synonym=JW5055;gene_synonym=yajM;function=transport%3B Transport of small molecules: Amino acids%2C amines;note=proline permease transport protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009063 - cellular amino acid catabolic process%3B GO_process: GO:0006526 - arginine biosynthetic process;codon_start=1;transl_table=11;product=proline-specific permease;protein_id=AAC73505.1;db_xref=GI:1786602;db_xref=ASAP:ABE-0001398;db_xref=UniProtKB/Swiss-Prot:P0AAE2;db_xref=EcoGene:EG13609 EMBL repeat_region 422372 422404 . + . ID=.886;note=REP36 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 422518 424332 . + . ID=.887;gene=malZ;locus_tag=b0403;gene_synonym=ECK0397;gene_synonym=JW0393;db_xref=EcoGene:EG10565 EMBL CDS 422518 424332 . + 0 ID=.888;gene=malZ;locus_tag=b0403;gene_synonym=ECK0397;gene_synonym=JW0393;ec_number=3.2.1.20;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0000272 - polysaccharide catabolic process;codon_start=1;transl_table=11;product=maltodextrin glucosidase;protein_id=AAC73506.2;db_xref=GI:345297171;db_xref=ASAP:ABE-0001402;db_xref=UniProtKB/Swiss-Prot:P21517;db_xref=EcoGene:EG10565 EMBL gene 424337 424918 . - . ID=.889;gene=acpH;locus_tag=b0404;gene_synonym=acpD;gene_synonym=ECK0398;gene_synonym=JW0394;gene_synonym=yajB;db_xref=EcoGene:EG11095 EMBL CDS 424337 424918 . - 0 ID=.890;gene=acpH;locus_tag=b0404;gene_synonym=acpD;gene_synonym=ECK0398;gene_synonym=JW0394;gene_synonym=yajB;function=enzyme%3B Not classified;note=putative glycoprotein;codon_start=1;transl_table=11;product=acyl carrier protein (ACP) phosphodiesterase%3B ACP hydrolyase;protein_id=AAC73507.1;db_xref=GI:1786605;db_xref=ASAP:ABE-0001404;db_xref=UniProtKB/Swiss-Prot:P21515;db_xref=EcoGene:EG11095 EMBL gene 425011 426081 . + . ID=.891;gene=queA;locus_tag=b0405;gene_synonym=ECK0399;gene_synonym=JW0395;db_xref=EcoGene:EG10812 EMBL CDS 425011 426081 . + 0 ID=.892;gene=queA;locus_tag=b0405;gene_synonym=ECK0399;gene_synonym=JW0395;ec_number=5.-.-.-;function=enzyme%3B Queuosine biosynthesis;note=synthesis of queuine in tRNA%3B probably S-adenosylmethionine:tRNA ribosyltransferase-isomerase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009451 - RNA modification;codon_start=1;transl_table=11;product=S-adenosylmethionine:tRNA ribosyltransferase-isomerase;protein_id=AAC73508.1;db_xref=GI:1786606;db_xref=ASAP:ABE-0001411;db_xref=UniProtKB/Swiss-Prot:P0A7F9;db_xref=EcoGene:EG10812 EMBL gene 426137 427264 . + . ID=.893;gene=tgt;locus_tag=b0406;gene_synonym=ECK0400;gene_synonym=JW0396;gene_synonym=vacC;db_xref=EcoGene:EG10996 EMBL CDS 426137 427264 . + 0 ID=.894;gene=tgt;locus_tag=b0406;gene_synonym=ECK0400;gene_synonym=JW0396;gene_synonym=vacC;ec_number=2.4.2.29;function=enzyme%3B tRNA modification;experiment=N-terminus verified by Edman degradation: PMID 8323579;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009451 - RNA modification;codon_start=1;transl_table=11;product=tRNA-guanine transglycosylase;protein_id=AAC73509.1;db_xref=GI:1786607;db_xref=ASAP:ABE-0001413;db_xref=UniProtKB/Swiss-Prot:P0A847;db_xref=EcoGene:EG10996 EMBL gene 427287 427619 . + . ID=.895;gene=yajC;locus_tag=b0407;gene_synonym=ECK0401;gene_synonym=JW0397;db_xref=EcoGene:EG11096 EMBL CDS 427287 427619 . + 0 ID=.896;gene=yajC;locus_tag=b0407;gene_synonym=ECK0401;gene_synonym=JW0397;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=SecYEG protein translocase auxillary subunit;protein_id=AAC73510.1;db_xref=GI:1786608;db_xref=ASAP:ABE-0001415;db_xref=UniProtKB/Swiss-Prot:P0ADZ7;db_xref=EcoGene:EG11096 EMBL gene 427647 429494 . + . ID=.897;gene=secD;locus_tag=b0408;gene_synonym=ECK0402;gene_synonym=JW0398;db_xref=EcoGene:EG10938 EMBL CDS 427647 429494 . + 0 ID=.898;gene=secD;locus_tag=b0408;gene_synonym=ECK0402;gene_synonym=JW0398;function=transport%3B Protein%2C peptide secretion;note=protein secretion%3B membrane protein%2C part of the channel%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=SecYEG protein translocase auxillary subunit;protein_id=AAC73511.1;db_xref=GI:1786609;db_xref=ASAP:ABE-0001417;db_xref=UniProtKB/Swiss-Prot:P0AG90;db_xref=EcoGene:EG10938 EMBL gene 429505 430476 . + . ID=.899;gene=secF;locus_tag=b0409;gene_synonym=ECK0403;gene_synonym=JW0399;db_xref=EcoGene:EG10940 EMBL CDS 429505 430476 . + 0 ID=.900;gene=secF;locus_tag=b0409;gene_synonym=ECK0403;gene_synonym=JW0399;function=transport%3B Protein%2C peptide secretion;note=protein secretion%2C membrane protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=SecYEG protein translocase auxillary subunit;protein_id=AAC73512.1;db_xref=GI:1786610;db_xref=ASAP:ABE-0001419;db_xref=UniProtKB/Swiss-Prot:P0AG93;db_xref=EcoGene:EG10940 EMBL gene 430605 430952 . + . ID=.901;gene=yajD;locus_tag=b0410;gene_synonym=ECK0404;gene_synonym=JW0400;db_xref=EcoGene:EG11097 EMBL CDS 430605 430952 . + 0 ID=.902;gene=yajD;locus_tag=b0410;gene_synonym=ECK0404;gene_synonym=JW0400;codon_start=1;transl_table=11;product=HNH nuclease family protein;protein_id=AAC73513.1;db_xref=GI:1786611;db_xref=ASAP:ABE-0001422;db_xref=UniProtKB/Swiss-Prot:P0AAQ2;db_xref=EcoGene:EG11097 EMBL repeat_region 430968 431065 . + . ID=.903;note=REP37 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 431129 432013 . - . ID=.904;gene=tsx;locus_tag=b0411;gene_synonym=ECK0405;gene_synonym=JW0401;gene_synonym=nupA;gene_synonym=T6rec;db_xref=EcoGene:EG11035 EMBL CDS 431129 432013 . - 0 ID=.905;gene=tsx;locus_tag=b0411;gene_synonym=ECK0405;gene_synonym=JW0401;gene_synonym=nupA;gene_synonym=T6rec;function=transport%3B Transport of small molecules: Nucleosides%2C purines%2C pyrimidines;note=nucleoside channel%3B receptor of phage T6 and colicin K%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane%3B GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion;codon_start=1;transl_table=11;product=nucleoside channel%2C receptor of phage T6 and colicin K;protein_id=AAC73514.1;db_xref=GI:1786612;db_xref=ASAP:ABE-0001425;db_xref=UniProtKB/Swiss-Prot:P0A927;db_xref=EcoGene:EG11035 EMBL gene 432312 432851 . - . ID=.906;gene=yajI;locus_tag=b0412;gene_synonym=ECK0406;gene_synonym=JW5056;db_xref=EcoGene:EG12874 EMBL CDS 432312 432851 . - 0 ID=.907;gene=yajI;locus_tag=b0412;gene_synonym=ECK0406;gene_synonym=JW5056;codon_start=1;transl_table=11;product=putative lipoprotein;protein_id=AAC73515.2;db_xref=GI:87081734;db_xref=ASAP:ABE-0001433;db_xref=UniProtKB/Swiss-Prot:P46122;db_xref=EcoGene:EG12874 EMBL gene 433002 433451 . + . ID=.908;gene=nrdR;locus_tag=b0413;gene_synonym=ECK0407;gene_synonym=JW0403;gene_synonym=ribX;gene_synonym=ybaD;db_xref=EcoGene:EG11320 EMBL CDS 433002 433451 . + 0 ID=.909;gene=nrdR;locus_tag=b0413;gene_synonym=ECK0407;gene_synonym=JW0403;gene_synonym=ribX;gene_synonym=ybaD;codon_start=1;transl_table=11;product=Nrd regulon repressor;protein_id=AAC73516.1;db_xref=GI:1786615;db_xref=ASAP:ABE-0001437;db_xref=UniProtKB/Swiss-Prot:P0A8D0;db_xref=EcoGene:EG11320 EMBL gene 433455 434558 . + . ID=.910;gene=ribD;locus_tag=b0414;gene_synonym=ECK0408;gene_synonym=JW0404;gene_synonym=ribG;gene_synonym=ybaE;db_xref=EcoGene:EG11321 EMBL CDS 433455 434558 . + 0 ID=.911;gene=ribD;locus_tag=b0414;gene_synonym=ECK0408;gene_synonym=JW0404;gene_synonym=ribG;gene_synonym=ybaE;ec_number=1.1.1.193;ec_number=3.5.4.26;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Riboflavin;codon_start=1;transl_table=11;product=fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductase;protein_id=AAC73517.1;db_xref=GI:1786616;db_xref=ASAP:ABE-0001441;db_xref=UniProtKB/Swiss-Prot:P25539;db_xref=EcoGene:EG11321 EMBL gene 434647 435117 . + . ID=.912;gene=ribE;locus_tag=b0415;gene_synonym=ECK0409;gene_synonym=JW0405;gene_synonym=ribH;gene_synonym=ybaF;db_xref=EcoGene:EG11322 EMBL CDS 434647 435117 . + 0 ID=.913;gene=ribE;locus_tag=b0415;gene_synonym=ECK0409;gene_synonym=JW0405;gene_synonym=ribH;gene_synonym=ybaF;ec_number=2.5.1.9;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Riboflavin;note=riboflavin synthase%2C beta chain;codon_start=1;transl_table=11;product=riboflavin synthase beta chain;protein_id=AAC73518.1;db_xref=GI:1786617;db_xref=ASAP:ABE-0001444;db_xref=UniProtKB/Swiss-Prot:P61714;db_xref=EcoGene:EG11322 EMBL gene 435137 435556 . + . ID=.914;gene=nusB;locus_tag=b0416;gene_synonym=ECK0410;gene_synonym=groNB;gene_synonym=JW0406;gene_synonym=ssaD;gene_synonym=ssyB;db_xref=EcoGene:EG10666 EMBL CDS 435137 435556 . + 0 ID=.915;gene=nusB;locus_tag=b0416;gene_synonym=ECK0410;gene_synonym=groNB;gene_synonym=JW0406;gene_synonym=ssaD;gene_synonym=ssyB;function=factor%3B RNA synthesis%2C modification%2C DNA transcription;note=transcription termination%3B L factor%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=transcription antitermination protein;protein_id=AAC73519.1;db_xref=GI:1786618;db_xref=ASAP:ABE-0001447;db_xref=UniProtKB/Swiss-Prot:P0A780;db_xref=EcoGene:EG10666 EMBL gene 435634 436611 . + . ID=.916;gene=thiL;locus_tag=b0417;gene_synonym=ECK0411;gene_synonym=JW0407;db_xref=EcoGene:EG20227 EMBL CDS 435634 436611 . + 0 ID=.917;gene=thiL;locus_tag=b0417;gene_synonym=ECK0411;gene_synonym=JW0407;ec_number=2.7.4.16;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Thiamine;note=GO_process: GO:0009228 - thiamin biosynthetic process;codon_start=1;transl_table=11;product=thiamine monophosphate kinase;protein_id=AAC73520.1;db_xref=GI:1786619;db_xref=ASAP:ABE-0001452;db_xref=UniProtKB/Swiss-Prot:P0AGG0;db_xref=EcoGene:EG20227 EMBL gene 436589 437107 . + . ID=.918;gene=pgpA;locus_tag=b0418;gene_synonym=ECK0412;gene_synonym=JW0408;gene_synonym=yajN;db_xref=EcoGene:EG10704 EMBL CDS 436589 437107 . + 0 ID=.919;gene=pgpA;locus_tag=b0418;gene_synonym=ECK0412;gene_synonym=JW0408;gene_synonym=yajN;ec_number=3.1.3.27;function=enzyme%3B Macromolecule synthesis%2C modification: Phospholipids;note=phosphatidylglycerophosphatase%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0008654 - phospholipid biosynthetic process;codon_start=1;transl_table=11;product=phosphatidylglycerophosphatase A;protein_id=AAC73521.1;db_xref=GI:1786620;db_xref=ASAP:ABE-0001454;db_xref=UniProtKB/Swiss-Prot:P18200;db_xref=EcoGene:EG10704 EMBL repeat_region 437120 437156 . + . ID=.920;note=REP38 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 437161 438135 . - . ID=.921;gene=yajO;locus_tag=b0419;gene_synonym=ECK0413;gene_synonym=JW0409;db_xref=EcoGene:EG13611 EMBL CDS 437161 438135 . - 0 ID=.922;gene=yajO;locus_tag=b0419;gene_synonym=ECK0413;gene_synonym=JW0409;note=putative NAD(P)H-dependent xylose reductase;codon_start=1;transl_table=11;product=2-carboxybenzaldehyde reductase;protein_id=AAC73522.2;db_xref=GI:87081735;db_xref=ASAP:ABE-0001457;db_xref=UniProtKB/Swiss-Prot:P77735;db_xref=EcoGene:EG13611 EMBL gene 438315 440177 . - . ID=.923;gene=dxs;locus_tag=b0420;gene_synonym=ECK0414;gene_synonym=JW0410;gene_synonym=yajP;db_xref=EcoGene:EG13612 EMBL CDS 438315 440177 . - 0 ID=.924;gene=dxs;locus_tag=b0420;gene_synonym=ECK0414;gene_synonym=JW0410;gene_synonym=yajP;ec_number=2.2.1.7;function=enzyme%3B Central intermediary metabolism: Pool%2C multipurpose conversions;note=1-deoxyxylulose-5-phosphate synthase%3B flavoprotein%3B GO_process: GO:0008615 - pyridoxine biosynthetic process%3B GO_process: GO:0009228 - thiamin biosynthetic process;codon_start=1;transl_table=11;product=1-deoxyxylulose-5-phosphate synthase%2C thiamine triphosphate-binding%2C FAD-requiring;protein_id=AAC73523.1;db_xref=GI:1786622;db_xref=ASAP:ABE-0001461;db_xref=UniProtKB/Swiss-Prot:P77488;db_xref=EcoGene:EG13612 EMBL gene 440202 441101 . - . ID=.925;gene=ispA;locus_tag=b0421;gene_synonym=ECK0415;gene_synonym=JW0411;db_xref=EcoGene:EG10508 EMBL CDS 440202 441101 . - 0 ID=.926;gene=ispA;locus_tag=b0421;gene_synonym=ECK0415;gene_synonym=JW0411;ec_number=2.5.1.1;ec_number=2.5.1.10;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Menaquinone%2C ubiquinone;experiment=N-terminus verified by Edman degradation: PMID 9740056;note=GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=geranyltranstransferase;protein_id=AAC73524.1;db_xref=GI:1786623;db_xref=ASAP:ABE-0001463;db_xref=UniProtKB/Swiss-Prot:P22939;db_xref=EcoGene:EG10508 EMBL gene 441101 441343 . - . ID=.927;gene=xseB;locus_tag=b0422;gene_synonym=ECK0416;gene_synonym=JW0412;gene_synonym=yajE;db_xref=EcoGene:EG11098 EMBL CDS 441101 441343 . - 0 ID=.928;gene=xseB;locus_tag=b0422;gene_synonym=ECK0416;gene_synonym=JW0412;gene_synonym=yajE;ec_number=3.1.11.6;function=enzyme%3B Degradation of DNA;note=exonuclease VII%2C small subunit%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006308 - DNA catabolic process%3B GO_process: GO:0006281 - DNA repair;codon_start=1;transl_table=11;product=exonuclease VII small subunit;protein_id=AAC73525.1;db_xref=GI:1786624;db_xref=ASAP:ABE-0001466;db_xref=UniProtKB/Swiss-Prot:P0A8G9;db_xref=EcoGene:EG11098 EMBL gene 441549 442997 . + . ID=.929;gene=thiI;locus_tag=b0423;gene_synonym=ECK0417;gene_synonym=JW0413;gene_synonym=nuvA;gene_synonym=yajJ;gene_synonym=yajK;db_xref=EcoGene:EG13273 EMBL CDS 441549 442997 . + 0 ID=.930;gene=thiI;locus_tag=b0423;gene_synonym=ECK0417;gene_synonym=JW0413;gene_synonym=nuvA;gene_synonym=yajJ;gene_synonym=yajK;function=enzyme%3B tRNA modification;note=GO_process: GO:0009228 - thiamin biosynthetic process%3B GO_process: GO:0009451 - RNA modification;codon_start=1;transl_table=11;product=tRNA s(4)U8 sulfurtransferase;protein_id=AAC73526.1;db_xref=GI:1786625;db_xref=ASAP:ABE-0001470;db_xref=UniProtKB/Swiss-Prot:P77718;db_xref=EcoGene:EG13273 EMBL repeat_region 443018 443049 . + . ID=.931;note=REP39 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 443051 443641 . - . ID=.932;gene=yajL;locus_tag=b0424;gene_synonym=ECK0418;gene_synonym=JW5057;gene_synonym=thiJ;db_xref=EcoGene:EG13272 EMBL CDS 443051 443641 . - 0 ID=.933;gene=yajL;locus_tag=b0424;gene_synonym=ECK0418;gene_synonym=JW5057;gene_synonym=thiJ;note=GO_process: GO:0009102 - biotin biosynthetic process;codon_start=1;transl_table=11;product=oxidative-stress-resistance chaperone;protein_id=AAC73527.2;db_xref=GI:87081736;db_xref=ASAP:ABE-0001472;db_xref=UniProtKB/Swiss-Prot:Q46948;db_xref=EcoGene:EG13272 EMBL gene 443604 444515 . - . ID=.934;gene=panE;locus_tag=b0425;gene_synonym=apbA;gene_synonym=ECK0419;gene_synonym=JW0415;db_xref=EcoGene:EG13271 EMBL CDS 443604 444515 . - 0 ID=.935;gene=panE;locus_tag=b0425;gene_synonym=apbA;gene_synonym=ECK0419;gene_synonym=JW0415;ec_number=1.1.1.169;function=phenotype%3B Not classified;note=2-dehydropantoate 2-reductase%3B GO_process: GO:0006221 - pyrimidine nucleotide biosynthetic process;codon_start=1;transl_table=11;product=2-dehydropantoate reductase%2C NADPH-specific;protein_id=AAC73528.1;db_xref=GI:1786627;db_xref=ASAP:ABE-0001474;db_xref=UniProtKB/Swiss-Prot:P0A9J4;db_xref=EcoGene:EG13271 EMBL gene 444683 445174 . + . ID=.936;gene=yajQ;locus_tag=b0426;gene_synonym=ECK0420;gene_synonym=JW5058;db_xref=EcoGene:EG13613 EMBL CDS 444683 445174 . + 0 ID=.937;gene=yajQ;locus_tag=b0426;gene_synonym=ECK0420;gene_synonym=JW5058;codon_start=1;transl_table=11;product=phage Phi6 host factor%2C ATP/GTP binding protein;protein_id=AAC73529.2;db_xref=GI:87081737;db_xref=ASAP:ABE-0001478;db_xref=UniProtKB/Swiss-Prot:P0A8E7;db_xref=EcoGene:EG13613 EMBL repeat_region 445200 445286 . + . ID=.938;note=REP40 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 445302 446666 . - . ID=.939;gene=yajR;locus_tag=b0427;gene_synonym=ECK0421;gene_synonym=JW5059;db_xref=EcoGene:EG13614 EMBL CDS 445302 446666 . - 0 ID=.940;gene=yajR;locus_tag=b0427;gene_synonym=ECK0421;gene_synonym=JW5059;function=putative transport%3B Not classified;note=putative transport protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=putative transporter;protein_id=AAC73530.2;db_xref=GI:87081738;db_xref=ASAP:ABE-0001481;db_xref=UniProtKB/Swiss-Prot:P77726;db_xref=EcoGene:EG13614 EMBL gene 446815 447705 . - . ID=.941;gene=cyoE;locus_tag=b0428;gene_synonym=ECK0422;gene_synonym=JW0418;db_xref=EcoGene:EG10182 EMBL CDS 446815 447705 . - 0 ID=.942;gene=cyoE;locus_tag=b0428;gene_synonym=ECK0422;gene_synonym=JW0418;ec_number=2.5.1.-;function=enzyme%3B Energy metabolism%2C carbon: Aerobic respiration;note=protoheme IX farnesyltransferase (haeme O biosynthesis)%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009060 - aerobic respiration;codon_start=1;transl_table=11;product=protoheme IX farnesyltransferase;protein_id=AAC73531.1;db_xref=GI:1786631;db_xref=ASAP:ABE-0001484;db_xref=UniProtKB/Swiss-Prot:P0AEA5;db_xref=EcoGene:EG10182 EMBL gene 447717 448046 . - . ID=.943;gene=cyoD;locus_tag=b0429;gene_synonym=ECK0423;gene_synonym=JW0419;db_xref=EcoGene:EG10181 EMBL CDS 447717 448046 . - 0 ID=.944;gene=cyoD;locus_tag=b0429;gene_synonym=ECK0423;gene_synonym=JW0419;ec_number=1.10.3.-;function=enzyme%3B Energy metabolism%2C carbon: Aerobic respiration;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009060 - aerobic respiration;codon_start=1;transl_table=11;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=AAC73532.1;db_xref=GI:1786632;db_xref=ASAP:ABE-0001487;db_xref=UniProtKB/Swiss-Prot:P0ABJ6;db_xref=EcoGene:EG10181 EMBL gene 448046 448660 . - . ID=.945;gene=cyoC;locus_tag=b0430;gene_synonym=ECK0424;gene_synonym=JW0420;db_xref=EcoGene:EG10180 EMBL CDS 448046 448660 . - 0 ID=.946;gene=cyoC;locus_tag=b0430;gene_synonym=ECK0424;gene_synonym=JW0420;ec_number=1.10.3.-;function=enzyme%3B Energy metabolism%2C carbon: Aerobic respiration;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009060 - aerobic respiration;codon_start=1;transl_table=11;product=cytochrome o ubiquinol oxidase subunit III;protein_id=AAC73533.1;db_xref=GI:1786633;db_xref=ASAP:ABE-0001491;db_xref=UniProtKB/Swiss-Prot:P0ABJ3;db_xref=EcoGene:EG10180 EMBL gene 448650 450641 . - . ID=.947;gene=cyoB;locus_tag=b0431;gene_synonym=ECK0425;gene_synonym=JW0421;db_xref=EcoGene:EG10179 EMBL CDS 448650 450641 . - 0 ID=.948;gene=cyoB;locus_tag=b0431;gene_synonym=ECK0425;gene_synonym=JW0421;ec_number=1.10.3.-;function=enzyme%3B Energy metabolism%2C carbon: Aerobic respiration;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009060 - aerobic respiration;codon_start=1;transl_table=11;product=cytochrome o ubiquinol oxidase subunit I;protein_id=AAC73534.1;db_xref=GI:1786634;db_xref=ASAP:ABE-0001493;db_xref=UniProtKB/Swiss-Prot:P0ABI8;db_xref=EcoGene:EG10179 EMBL gene 450663 451610 . - . ID=.949;gene=cyoA;locus_tag=b0432;gene_synonym=ECK0426;gene_synonym=JW0422;db_xref=EcoGene:EG10178 EMBL CDS 450663 451610 . - 0 ID=.950;gene=cyoA;locus_tag=b0432;gene_synonym=ECK0426;gene_synonym=JW0422;ec_number=1.10.3.-;function=enzyme%3B Energy metabolism%2C carbon: Aerobic respiration;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009060 - aerobic respiration;codon_start=1;transl_table=11;product=cytochrome o ubiquinol oxidase subunit II;protein_id=AAC73535.1;db_xref=GI:1786635;db_xref=ASAP:ABE-0001495;db_xref=UniProtKB/Swiss-Prot:P0ABJ1;db_xref=EcoGene:EG10178 EMBL gene 452070 453545 . - . ID=.951;gene=ampG;locus_tag=b0433;gene_synonym=ECK0427;gene_synonym=JW0423;db_xref=EcoGene:EG12183 EMBL CDS 452070 453545 . - 0 ID=.952;gene=ampG;locus_tag=b0433;gene_synonym=ECK0427;gene_synonym=JW0423;function=regulator%3B Drug/analog sensitivity;note=regulates beta-lactamase synthesis%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0000270 - peptidoglycan metabolic process;codon_start=1;transl_table=11;product=muropeptide transporter;protein_id=AAC73536.1;db_xref=GI:1786636;db_xref=ASAP:ABE-0001501;db_xref=UniProtKB/Swiss-Prot:P0AE16;db_xref=EcoGene:EG12183 EMBL gene 453589 454167 . - . ID=.953;gene=yajG;locus_tag=b0434;gene_synonym=ECK0428;gene_synonym=JW0424;db_xref=EcoGene:EG12182 EMBL CDS 453589 454167 . - 0 ID=.954;gene=yajG;locus_tag=b0434;gene_synonym=ECK0428;gene_synonym=JW0424;function=putative enzyme%3B Not classified;note=putative polymerase/proteinase;codon_start=1;transl_table=11;product=putative lipoprotein;protein_id=AAC73537.2;db_xref=GI:87081739;db_xref=ASAP:ABE-0001504;db_xref=UniProtKB/Swiss-Prot:P0ADA5;db_xref=EcoGene:EG12182 EMBL gene 454472 454789 . + . ID=.955;gene=bolA;locus_tag=b0435;gene_synonym=ECK0429;gene_synonym=JW5060;db_xref=EcoGene:EG10125 EMBL CDS 454472 454789 . + 0 ID=.956;gene=bolA;locus_tag=b0435;gene_synonym=ECK0429;gene_synonym=JW5060;function=putative regulator%3B Murein sacculus%2C peptidoglycan;note=possible regulator of murein genes%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006970 - response to osmotic stress;codon_start=1;transl_table=11;product=stationary-phase morphogene%2C transcriptional repressor for mreB%3B also regulator for dacA%2C dacC%2C and ampC;protein_id=AAC73538.2;db_xref=GI:87081740;db_xref=ASAP:ABE-0001508;db_xref=UniProtKB/Swiss-Prot:P0ABE2;db_xref=EcoGene:EG10125 EMBL gene 455133 456431 . + . ID=.957;gene=tig;locus_tag=b0436;gene_synonym=ECK0430;gene_synonym=JW0426;db_xref=EcoGene:EG11003 EMBL CDS 455133 456431 . + 0 ID=.958;gene=tig;locus_tag=b0436;gene_synonym=ECK0430;gene_synonym=JW0426;function=factor%3B Cell division;experiment=N-terminus verified by Edman degradation: PMID 2211496%2C2843289%2C9298646%2C9600841%2C9868784;note=trigger factor%3B a molecular chaperone involved in cell division%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=peptidyl-prolyl cis/trans isomerase (trigger factor);protein_id=AAC73539.1;db_xref=GI:1786640;db_xref=ASAP:ABE-0001511;db_xref=UniProtKB/Swiss-Prot:P0A850;db_xref=EcoGene:EG11003 EMBL gene 456677 457300 . + . ID=.959;gene=clpP;locus_tag=b0437;gene_synonym=ECK0431;gene_synonym=JW0427;gene_synonym=lopP;gene_synonym=wseA;db_xref=EcoGene:EG10158 EMBL CDS 456677 457300 . + 0 ID=.960;gene=clpP;locus_tag=b0437;gene_synonym=ECK0431;gene_synonym=JW0427;gene_synonym=lopP;gene_synonym=wseA;ec_number=3.4.21.92;function=enzyme%3B Degradation of proteins%2C peptides%2C glyco;note=ATP-dependent proteolytic subunit of clpA-clpP serine protease%2C heat shock protein F21.5%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0008233 - peptidase activity%3B GO_process: GO:0009266 - response to temperature stimulus;codon_start=1;transl_table=11;product=proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine proteases;protein_id=AAC73540.1;db_xref=GI:1786641;db_xref=ASAP:ABE-0001515;db_xref=UniProtKB/Swiss-Prot:P0A6G7;db_xref=EcoGene:EG10158 EMBL gene 457426 458700 . + . ID=.961;gene=clpX;locus_tag=b0438;gene_synonym=ECK0432;gene_synonym=JW0428;gene_synonym=lopC;db_xref=EcoGene:EG10159 EMBL CDS 457426 458700 . + 0 ID=.962;gene=clpX;locus_tag=b0438;gene_synonym=ECK0432;gene_synonym=JW0428;gene_synonym=lopC;function=enzyme%3B Degradation of proteins%2C peptides%2C glyco;note=ATP-dependent specificity component of clpP serine protease%2C chaperone%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine protease;protein_id=AAC73541.1;db_xref=GI:1786642;db_xref=ASAP:ABE-0001517;db_xref=UniProtKB/Swiss-Prot:P0A6H1;db_xref=EcoGene:EG10159 EMBL gene 458888 461242 . + . ID=.963;gene=lon;locus_tag=b0439;gene_synonym=capR;gene_synonym=deg;gene_synonym=dir;gene_synonym=ECK0433;gene_synonym=JW0429;gene_synonym=lonA;gene_synonym=lopA;gene_synonym=muc;db_xref=EcoGene:EG10542 EMBL CDS 458888 461242 . + 0 ID=.964;gene=lon;locus_tag=b0439;gene_synonym=capR;gene_synonym=deg;gene_synonym=dir;gene_synonym=ECK0433;gene_synonym=JW0429;gene_synonym=lonA;gene_synonym=lopA;gene_synonym=muc;ec_number=3.4.21.53;function=enzyme%3B Global regulatory functions;experiment=N-terminus verified by Edman degradation: PMID 2984174%2C8294008;note=DNA-binding%2C ATP-dependent protease La%3B heat shock K-protein%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0008233 - peptidase activity;codon_start=1;transl_table=11;product=DNA-binding ATP-dependent protease La;protein_id=AAC73542.1;db_xref=GI:1786643;db_xref=ASAP:ABE-0001521;db_xref=UniProtKB/Swiss-Prot:P0A9M0;db_xref=EcoGene:EG10542 EMBL gene 461451 461723 . + . ID=.965;gene=hupB;locus_tag=b0440;gene_synonym=dpeA;gene_synonym=ECK0434;gene_synonym=hopD;gene_synonym=JW0430;db_xref=EcoGene:EG10467 EMBL CDS 461451 461723 . + 0 ID=.966;gene=hupB;locus_tag=b0440;gene_synonym=dpeA;gene_synonym=ECK0434;gene_synonym=hopD;gene_synonym=JW0430;function=factor%3B Basic proteins - synthesis%2C modification;experiment=N-terminus verified by Edman degradation: PMID 215461%2C350619%2C6987059%2C9298646;note=DNA-binding protein HU-beta%2C NS1 (HU-1)%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=HU%2C DNA-binding transcriptional regulator%2C beta subunit;protein_id=AAC73543.1;db_xref=GI:1786644;db_xref=ASAP:ABE-0001527;db_xref=UniProtKB/Swiss-Prot:P0ACF4;db_xref=EcoGene:EG10467 EMBL gene 461915 463786 . + . ID=.967;gene=ppiD;locus_tag=b0441;gene_synonym=ECK0435;gene_synonym=JW0431;gene_synonym=ybaU;db_xref=EcoGene:EG13249 EMBL CDS 461915 463786 . + 0 ID=.968;gene=ppiD;locus_tag=b0441;gene_synonym=ECK0435;gene_synonym=JW0431;gene_synonym=ybaU;ec_number=5.2.1.8;function=putative factor%3B Not classified;note=GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=periplasmic folding chaperone%2C has an inactive PPIase domain;protein_id=AAC73544.1;db_xref=GI:1786645;db_xref=ASAP:ABE-0001531;db_xref=UniProtKB/Swiss-Prot:P0ADY1;db_xref=EcoGene:EG13249 EMBL gene 463937 464308 . + . ID=.969;gene=ybaV;locus_tag=b0442;gene_synonym=ECK0436;gene_synonym=JW0432;db_xref=EcoGene:EG13250 EMBL CDS 463937 464308 . + 0 ID=.970;gene=ybaV;locus_tag=b0442;gene_synonym=ECK0436;gene_synonym=JW0432;codon_start=1;transl_table=11;product=putative competence-suppressing periplasmic helix-hairpin-helix DNA-binding protein;protein_id=AAC73545.1;db_xref=GI:1786646;db_xref=ASAP:ABE-0001534;db_xref=UniProtKB/Swiss-Prot:P0AAR8;db_xref=EcoGene:EG13250 EMBL gene 464402 464800 . + . ID=.971;gene=fadM;locus_tag=b0443;gene_synonym=ECK0437;gene_synonym=JW0433;gene_synonym=tesC;gene_synonym=ybaW;db_xref=EcoGene:EG13251 EMBL CDS 464402 464800 . + 0 ID=.972;gene=fadM;locus_tag=b0443;gene_synonym=ECK0437;gene_synonym=JW0433;gene_synonym=tesC;gene_synonym=ybaW;function=enzyme%3B fatty acid degradation;codon_start=1;transl_table=11;product=long-chain acyl-CoA thioesterase III;protein_id=AAC73546.1;db_xref=GI:1786647;db_xref=ASAP:ABE-0001537;db_xref=UniProtKB/Swiss-Prot:P77712;db_xref=EcoGene:EG13251 EMBL repeat_region 464813 464837 . + . ID=.973;note=REP41 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 464852 465547 . - . ID=.974;gene=queC;locus_tag=b0444;gene_synonym=ECK0438;gene_synonym=JW0434;gene_synonym=ybaX;db_xref=EcoGene:EG13252 EMBL CDS 464852 465547 . - 0 ID=.975;gene=queC;locus_tag=b0444;gene_synonym=ECK0438;gene_synonym=JW0434;gene_synonym=ybaX;function=enzyme%3B Queuosine biosynthesis;note=GO_process: GO:0006805 - xenobiotic metabolic process;codon_start=1;transl_table=11;product=7-cyano-7-deazaguanine (preQ0) synthase%3B queuosine biosynthesis;protein_id=AAC73547.1;db_xref=GI:1786648;db_xref=ASAP:ABE-0001539;db_xref=UniProtKB/Swiss-Prot:P77756;db_xref=EcoGene:EG13252 EMBL gene 465612 467312 . - . ID=.976;gene=ybaE;locus_tag=b0445;gene_synonym=ECK0439;gene_synonym=JW0435;db_xref=EcoGene:EG13217 EMBL CDS 465612 467312 . - 0 ID=.977;gene=ybaE;locus_tag=b0445;gene_synonym=ECK0439;gene_synonym=JW0435;note=GO_component: GO:0042597 - periplasmic space;codon_start=1;transl_table=11;product=putative ABC transporter periplasmic binding protein;protein_id=AAC73548.1;db_xref=GI:1786650;db_xref=ASAP:ABE-0001542;db_xref=UniProtKB/Swiss-Prot:P46890;db_xref=EcoGene:EG13217 EMBL gene 467412 468230 . + . ID=.978;gene=cof;locus_tag=b0446;gene_synonym=ECK0440;gene_synonym=JW0436;db_xref=EcoGene:EG13216 EMBL CDS 467412 468230 . + 0 ID=.979;gene=cof;locus_tag=b0446;gene_synonym=ECK0440;gene_synonym=JW0436;codon_start=1;transl_table=11;product=thiamine pyrimidine pyrophosphate hydrolase%3B HMP-PP phosphatase;protein_id=AAC73549.2;db_xref=GI:87081741;db_xref=ASAP:ABE-0001548;db_xref=UniProtKB/Swiss-Prot:P46891;db_xref=EcoGene:EG13216 EMBL gene 468383 468841 . + . ID=.980;gene=ybaO;locus_tag=b0447;gene_synonym=ECK0441;gene_synonym=grp?;gene_synonym=JW0437;db_xref=EcoGene:EG13218 EMBL CDS 468383 468841 . + 0 ID=.981;gene=ybaO;locus_tag=b0447;gene_synonym=ECK0441;gene_synonym=grp?;gene_synonym=JW0437;function=putative regulator%3B Not classified;note=putative LRP-like transcriptional regulator%3B GO_function: GO:0016563 - transcription activator activity%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=putative DNA-binding transcriptional regulator;protein_id=AAC73550.2;db_xref=GI:87081742;db_xref=ASAP:ABE-0001553;db_xref=UniProtKB/Swiss-Prot:P0ACJ5;db_xref=EcoGene:EG13218 EMBL gene 468871 470643 . + . ID=.982;gene=mdlA;locus_tag=b0448;gene_synonym=ECK0442;gene_synonym=JW0438;gene_synonym=mdl;db_xref=EcoGene:EG11622 EMBL CDS 468871 470643 . + 0 ID=.983;gene=mdlA;locus_tag=b0448;gene_synonym=ECK0442;gene_synonym=JW0438;gene_synonym=mdl;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=putative multidrug ABC transporter ATPase;protein_id=AAC73551.1;db_xref=GI:1786653;db_xref=ASAP:ABE-0001555;db_xref=UniProtKB/Swiss-Prot:P77265;db_xref=EcoGene:EG11622 EMBL gene 470636 472417 . + . ID=.984;gene=mdlB;locus_tag=b0449;gene_synonym=ECK0443;gene_synonym=JW5061;gene_synonym=mdl;db_xref=EcoGene:EG14374 EMBL CDS 470636 472417 . + 0 ID=.985;gene=mdlB;locus_tag=b0449;gene_synonym=ECK0443;gene_synonym=JW5061;gene_synonym=mdl;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative multidrug ABC transporter ATPase;protein_id=AAC73552.1;db_xref=GI:1786654;db_xref=ASAP:ABE-0001557;db_xref=UniProtKB/Swiss-Prot:P0AAG5;db_xref=EcoGene:EG14374 EMBL gene 472598 472936 . + . ID=.986;gene=glnK;locus_tag=b0450;gene_synonym=ECK0444;gene_synonym=JW0440;gene_synonym=ybaI;db_xref=EcoGene:EG12191 EMBL CDS 472598 472936 . + 0 ID=.987;gene=glnK;locus_tag=b0450;gene_synonym=ECK0444;gene_synonym=JW0440;gene_synonym=ybaI;function=regulator%3B Central intermediary metabolism: Pool%2C multipurpose conversions;note=nitrogen regulatory protein P-II 2%3B GO_process: GO:0006807 - nitrogen compound metabolic process;codon_start=1;transl_table=11;product=nitrogen assimilation regulatory protein for GlnL%2C GlnE%2C and AmtB;protein_id=AAC73553.1;db_xref=GI:1786655;db_xref=ASAP:ABE-0001562;db_xref=UniProtKB/Swiss-Prot:P0AC55;db_xref=EcoGene:EG12191 EMBL gene 472966 474252 . + . ID=.988;gene=amtB;locus_tag=b0451;gene_synonym=ECK0445;gene_synonym=JW0441;gene_synonym=ybaG;db_xref=EcoGene:EG11821 EMBL CDS 472966 474252 . + 0 ID=.989;gene=amtB;locus_tag=b0451;gene_synonym=ECK0445;gene_synonym=JW0441;gene_synonym=ybaG;function=putative transport%3B Central intermediary metabolism: Pool%2C multipurpose conversions;note=probable ammonium transporter%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=ammonium transporter;protein_id=AAC73554.1;db_xref=GI:1786656;db_xref=ASAP:ABE-0001564;db_xref=UniProtKB/Swiss-Prot:P69681;db_xref=EcoGene:EG11821 EMBL repeat_region 474271 474293 . + . ID=.990;note=REP42 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 474301 475161 . - . ID=.991;gene=tesB;locus_tag=b0452;gene_synonym=ECK0446;gene_synonym=JW0442;db_xref=EcoGene:EG10995 EMBL CDS 474301 475161 . - 0 ID=.992;gene=tesB;locus_tag=b0452;gene_synonym=ECK0446;gene_synonym=JW0442;ec_number=3.1.2.-;function=enzyme%3B Fatty acid and phosphatidic acid biosynthesis;codon_start=1;transl_table=11;product=acyl-CoA thioesterase 2;protein_id=AAC73555.1;db_xref=GI:1786657;db_xref=ASAP:ABE-0001566;db_xref=UniProtKB/Swiss-Prot:P0AGG2;db_xref=EcoGene:EG10995 EMBL gene 475379 475951 . + . ID=.993;gene=ybaY;locus_tag=b0453;gene_synonym=ECK0447;gene_synonym=JW0443;db_xref=EcoGene:EG13253 EMBL CDS 475379 475951 . + 0 ID=.994;gene=ybaY;locus_tag=b0453;gene_synonym=ECK0447;gene_synonym=JW0443;function=phenotype%3B Not classified;note=glycoprotein/polysaccharide metabolism%3B GO_process: GO:0042158 - lipoprotein biosynthetic process%3B GO_process: GO:0009101 - glycoprotein biosynthetic process;codon_start=1;transl_table=11;product=outer membrane lipoprotein;protein_id=AAC73556.1;db_xref=GI:1786658;db_xref=ASAP:ABE-0001574;db_xref=UniProtKB/Swiss-Prot:P77717;db_xref=EcoGene:EG13253 EMBL gene 475982 476371 . - . ID=.995;gene=ybaZ;locus_tag=b0454;gene_synonym=ECK0448;gene_synonym=JW0444;db_xref=EcoGene:EG13254 EMBL CDS 475982 476371 . - 0 ID=.996;gene=ybaZ;locus_tag=b0454;gene_synonym=ECK0448;gene_synonym=JW0444;codon_start=1;transl_table=11;product=excision repair protein%2C alkyltransferase-like protein ATL;protein_id=AAC73557.1;db_xref=GI:1786659;db_xref=ASAP:ABE-0001576;db_xref=UniProtKB/Swiss-Prot:P0AFP2;db_xref=EcoGene:EG13254 EMBL gene 476448 476561 . + . ID=.997;gene=ffs;locus_tag=b0455;gene_synonym=ECK0449;gene_synonym=JWR0009;db_xref=EcoGene:EG30027 EMBL ncRNA 476448 476561 . + . ID=.998;ncrna_class=SRP_RNA;gene=ffs;locus_tag=b0455;gene_synonym=ECK0449;gene_synonym=JWR0009;product=4.5S sRNA component of Signal Recognition Particle (SRP);note=4.5S RNA%3B component of ribonucleoprotein particle%3B works with the Ffh protein%3B adjusted endpoints to reflect the mature 4.5S RNA (114 nt);function=2.2.6 information transfer%3B RNA related%3B rRNA%2C stable RNA;function=2.3.2 information transfer%3B protein related%3B translation;function=7.1 location of gene products%3B cytoplasm;function=component of Signal Recognition Particle (SRP) with the Ffh protein%3B involved in co-translational targeting of proteins to membranes;function=RNA%3B Ribosomal and stable RNAs;db_xref=ASAP:ABE-0001579;db_xref=EcoGene:EG30027 EMBL gene 476672 477025 . + . ID=.999;gene=ybaA;locus_tag=b0456;gene_synonym=ECK0450;gene_synonym=JW0445;db_xref=EcoGene:EG11099 EMBL CDS 476672 477025 . + 0 ID=.1000;gene=ybaA;locus_tag=b0456;gene_synonym=ECK0450;gene_synonym=JW0445;codon_start=1;transl_table=11;product=DUF1428 family protein;protein_id=AAC73558.1;db_xref=GI:1786661;db_xref=ASAP:ABE-0001582;db_xref=UniProtKB/Swiss-Prot:P0AAQ6;db_xref=EcoGene:EG11099 EMBL gene 477067 478617 . - . ID=.1001;gene=ylaB;locus_tag=b0457;gene_synonym=ECK0451;gene_synonym=JW5062;db_xref=EcoGene:EG14237 EMBL CDS 477067 478617 . - 0 ID=.1002;gene=ylaB;locus_tag=b0457;gene_synonym=ECK0451;gene_synonym=JW5062;codon_start=1;transl_table=11;product=putative membrane-anchored cyclic-di-GMP phosphodiesterase;protein_id=AAC73559.2;db_xref=GI:87081743;db_xref=ASAP:ABE-0001584;db_xref=UniProtKB/Swiss-Prot:P77473;db_xref=EcoGene:EG14237 EMBL gene 478781 479251 . - . ID=.1003;gene=ylaC;locus_tag=b0458;gene_synonym=ECK0452;gene_synonym=JW5063;db_xref=EcoGene:EG14238 EMBL CDS 478781 479251 . - 0 ID=.1004;gene=ylaC;locus_tag=b0458;gene_synonym=ECK0452;gene_synonym=JW5063;codon_start=1;transl_table=11;product=DUF1449 family inner membrane protein;protein_id=AAC73560.2;db_xref=GI:87081744;db_xref=ASAP:ABE-0001587;db_xref=UniProtKB/Swiss-Prot:P0AAS0;db_xref=EcoGene:EG14238 EMBL gene 479367 479918 . - . ID=.1005;gene=maa;locus_tag=b0459;gene_synonym=ECK0453;gene_synonym=JW0448;gene_synonym=ylaD;db_xref=EcoGene:EG14239 EMBL CDS 479367 479918 . - 0 ID=.1006;gene=maa;locus_tag=b0459;gene_synonym=ECK0453;gene_synonym=JW0448;gene_synonym=ylaD;ec_number=2.3.1.79;function=putative enzyme%3B Not classified;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=maltose O-acetyltransferase;protein_id=AAC73561.1;db_xref=GI:1786664;db_xref=ASAP:ABE-0001591;db_xref=UniProtKB/Swiss-Prot:P77791;db_xref=EcoGene:EG14239 EMBL gene 480090 480308 . - . ID=.1007;gene=hha;locus_tag=b0460;gene_synonym=ECK0454;gene_synonym=JW0449;db_xref=EcoGene:EG10439 EMBL CDS 480090 480308 . - 0 ID=.1008;gene=hha;locus_tag=b0460;gene_synonym=ECK0454;gene_synonym=JW0449;function=regulator%3B Proteins - translation and modification;note=haemolysin expression modulating protein%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=modulator of gene expression%2C with H-NS;protein_id=AAC73562.1;db_xref=GI:1786665;db_xref=ASAP:ABE-0001594;db_xref=UniProtKB/Swiss-Prot:P0ACE3;db_xref=EcoGene:EG10439 EMBL gene 480334 480708 . - . ID=.1009;gene=tomB;locus_tag=b0461;gene_synonym=ECK0455;gene_synonym=JW0450;gene_synonym=ybaJ;db_xref=EcoGene:EG12429 EMBL CDS 480334 480708 . - 0 ID=.1010;gene=tomB;locus_tag=b0461;gene_synonym=ECK0455;gene_synonym=JW0450;gene_synonym=ybaJ;codon_start=1;transl_table=11;product=Hha toxicity attenuator%3B conjugation-related protein;protein_id=AAC73563.1;db_xref=GI:1786666;db_xref=ASAP:ABE-0001596;db_xref=UniProtKB/Swiss-Prot:P0AAR0;db_xref=EcoGene:EG12429 EMBL gene 481254 484403 . - . ID=.1011;gene=acrB;locus_tag=b0462;gene_synonym=acrE;gene_synonym=ECK0456;gene_synonym=JW0451;db_xref=EcoGene:EG11704 EMBL CDS 481254 484403 . - 0 ID=.1012;gene=acrB;locus_tag=b0462;gene_synonym=acrE;gene_synonym=ECK0456;gene_synonym=JW0451;function=transport%3B Drug/analog sensitivity;note=acridine efflux pump%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=multidrug efflux system protein;protein_id=AAC73564.1;db_xref=GI:1786667;db_xref=ASAP:ABE-0001601;db_xref=UniProtKB/Swiss-Prot:P31224;db_xref=EcoGene:EG11704 EMBL gene 484426 485619 . - . ID=.1013;gene=acrA;locus_tag=b0463;gene_synonym=ECK0457;gene_synonym=JW0452;gene_synonym=lir;gene_synonym=Mb;gene_synonym=mbl;gene_synonym=mtcA;gene_synonym=nbsA;gene_synonym=sipB;db_xref=EcoGene:EG11703 EMBL CDS 484426 485619 . - 0 ID=.1014;gene=acrA;locus_tag=b0463;gene_synonym=ECK0457;gene_synonym=JW0452;gene_synonym=lir;gene_synonym=Mb;gene_synonym=mbl;gene_synonym=mtcA;gene_synonym=nbsA;gene_synonym=sipB;function=transport%3B Drug/analog sensitivity;note=acridine efflux pump%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=multidrug efflux system;protein_id=AAC73565.1;db_xref=GI:1786668;db_xref=ASAP:ABE-0001603;db_xref=UniProtKB/Swiss-Prot:P0AE06;db_xref=EcoGene:EG11703 EMBL gene 485761 486408 . + . ID=.1015;gene=acrR;locus_tag=b0464;gene_synonym=ECK0458;gene_synonym=JW0453;gene_synonym=ybaH;db_xref=EcoGene:EG12116 EMBL CDS 485761 486408 . + 0 ID=.1016;gene=acrR;locus_tag=b0464;gene_synonym=ECK0458;gene_synonym=JW0453;gene_synonym=ybaH;function=regulator%3B Drug/analog sensitivity;note=acrAB operon repressor%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription%3B GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=transcriptional repressor;protein_id=AAC73566.1;db_xref=GI:1786669;db_xref=ASAP:ABE-0001608;db_xref=UniProtKB/Swiss-Prot:P0ACS9;db_xref=EcoGene:EG12116 EMBL gene 486536 489898 . + . ID=.1017;gene=mscK;locus_tag=b0465;gene_synonym=aefA;gene_synonym=ECK0459;gene_synonym=JW0454;gene_synonym=kefA;gene_synonym=pnuH;db_xref=EcoGene:EG14240 EMBL CDS 486536 489898 . + 0 ID=.1018;gene=mscK;locus_tag=b0465;gene_synonym=aefA;gene_synonym=ECK0459;gene_synonym=JW0454;gene_synonym=kefA;gene_synonym=pnuH;note=mechanosensitive channel protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=mechanosensitive channel protein%2C intermediate conductance%2C K+ regulated;protein_id=AAC73567.1;db_xref=GI:1786670;db_xref=ASAP:ABE-0001613;db_xref=UniProtKB/Swiss-Prot:P77338;db_xref=EcoGene:EG14240 EMBL repeat_region 489959 490056 . + . ID=.1019;note=RIP43 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 490110 490271 . - . ID=.1020;gene=ybaM;locus_tag=b0466;gene_synonym=ECK0460;gene_synonym=JW0455;db_xref=EcoGene:EG12830 EMBL CDS 490110 490271 . - 0 ID=.1021;gene=ybaM;locus_tag=b0466;gene_synonym=ECK0460;gene_synonym=JW0455;codon_start=1;transl_table=11;product=DUF2496 family protein;protein_id=AAC73568.1;db_xref=GI:1786672;db_xref=ASAP:ABE-0001616;db_xref=UniProtKB/Swiss-Prot:P45807;db_xref=EcoGene:EG12830 EMBL gene 490285 490812 . - . ID=.1022;gene=priC;locus_tag=b0467;gene_synonym=ECK0461;gene_synonym=JW0456;db_xref=EcoGene:EG10765 EMBL CDS 490285 490812 . - 0 ID=.1023;gene=priC;locus_tag=b0467;gene_synonym=ECK0461;gene_synonym=JW0456;function=factor%3B DNA - replication%2C repair%2C restriction/modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006261 - DNA-dependent DNA replication;codon_start=1;transl_table=11;product=primosomal replication protein N'';protein_id=AAC73569.1;db_xref=GI:1786673;db_xref=ASAP:ABE-0001619;db_xref=UniProtKB/Swiss-Prot:P23862;db_xref=EcoGene:EG10765 EMBL gene 490882 491259 . + . ID=.1024;gene=ybaN;locus_tag=b0468;gene_synonym=ECK0462;gene_synonym=JW0457;db_xref=EcoGene:EG12843 EMBL CDS 490882 491259 . + 0 ID=.1025;gene=ybaN;locus_tag=b0468;gene_synonym=ECK0462;gene_synonym=JW0457;function=orf%3B Not classified;note=putative gene 58;codon_start=1;transl_table=11;product=DUF454 family inner membrane protein;protein_id=AAC73570.1;db_xref=GI:1786674;db_xref=ASAP:ABE-0001625;db_xref=UniProtKB/Swiss-Prot:P0AAR5;db_xref=EcoGene:EG12843 EMBL gene 491412 491963 . + . ID=.1026;gene=apt;locus_tag=b0469;gene_synonym=ECK0463;gene_synonym=JW0458;db_xref=EcoGene:EG10051 EMBL CDS 491412 491963 . + 0 ID=.1027;gene=apt;locus_tag=b0469;gene_synonym=ECK0463;gene_synonym=JW0458;ec_number=2.4.2.7;function=enzyme%3B Salvage of nucleosides and nucleotides;experiment=N-terminus verified by Edman degradation: PMID 9573169;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion;codon_start=1;transl_table=11;product=adenine phosphoribosyltransferase;protein_id=AAC73571.1;db_xref=GI:1786675;db_xref=ASAP:ABE-0001628;db_xref=UniProtKB/Swiss-Prot:P69503;db_xref=EcoGene:EG10051 EMBL gene 492092 494023 . + . ID=.1028;gene=dnaX;locus_tag=b0470;gene_synonym=dnaZ;gene_synonym=ECK0464;gene_synonym=JW0459;db_xref=EcoGene:EG10245 EMBL CDS 492092 494023 . + 0 ID=.1029;gene=dnaX;locus_tag=b0470;gene_synonym=dnaZ;gene_synonym=ECK0464;gene_synonym=JW0459;ec_number=2.7.7.7;function=enzyme%3B DNA - replication%2C repair%2C restriction/modification;note=DNA polymerase III%2C tau and gamma subunits%3B DNA elongation factor III%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006261 - DNA-dependent DNA replication;codon_start=1;transl_table=11;product=DNA polymerase III/DNA elongation factor III%2C tau and gamma subunits;protein_id=AAC73572.1;db_xref=GI:1786676;db_xref=ASAP:ABE-0001633;db_xref=UniProtKB/Swiss-Prot:P06710;db_xref=EcoGene:EG10245 EMBL gene 494076 494405 . + . ID=.1030;gene=ybaB;locus_tag=b0471;gene_synonym=ECK0465;gene_synonym=efbC;gene_synonym=JW0460;db_xref=EcoGene:EG11100 EMBL CDS 494076 494405 . + 0 ID=.1031;gene=ybaB;locus_tag=b0471;gene_synonym=ECK0465;gene_synonym=efbC;gene_synonym=JW0460;function=factor%3B DNA - replication%2C repair%2C restriction/modification;codon_start=1;transl_table=11;product=DNA-binding protein%2C putative nucleoid-associated protein;protein_id=AAC73573.1;db_xref=GI:1786677;db_xref=ASAP:ABE-0001636;db_xref=UniProtKB/Swiss-Prot:P0A8B5;db_xref=EcoGene:EG11100 EMBL gene 494405 495010 . + . ID=.1032;gene=recR;locus_tag=b0472;gene_synonym=ECK0466;gene_synonym=JW0461;db_xref=EcoGene:EG10834 EMBL CDS 494405 495010 . + 0 ID=.1033;gene=recR;locus_tag=b0472;gene_synonym=ECK0466;gene_synonym=JW0461;function=putative enzyme%3B DNA - replication%2C repair%2C restriction/modification;note=recombination and repair%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006281 - DNA repair%3B GO_process: GO:0006310 - DNA recombination;codon_start=1;transl_table=11;product=gap repair protein;protein_id=AAC73574.1;db_xref=GI:1786678;db_xref=ASAP:ABE-0001638;db_xref=UniProtKB/Swiss-Prot:P0A7H6;db_xref=EcoGene:EG10834 EMBL gene 495120 496994 . + . ID=.1034;gene=htpG;locus_tag=b0473;gene_synonym=ECK0467;gene_synonym=JW0462;db_xref=EcoGene:EG10461 EMBL CDS 495120 496994 . + 0 ID=.1035;gene=htpG;locus_tag=b0473;gene_synonym=ECK0467;gene_synonym=JW0462;function=factor%3B Chaperones;experiment=N-terminus verified by Edman degradation: PMID 9298646;note=chaperone Hsp90%2C heat shock protein C 62.5%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=protein refolding molecular co-chaperone Hsp90%2C Hsp70-dependent%3B heat-shock protein%3B ATPase;protein_id=AAC73575.1;db_xref=GI:1786679;db_xref=ASAP:ABE-0001642;db_xref=UniProtKB/Swiss-Prot:P0A6Z3;db_xref=EcoGene:EG10461 EMBL repeat_region 497001 497026 . + . ID=.1036;note=REP44 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 497175 497819 . + . ID=.1037;gene=adk;locus_tag=b0474;gene_synonym=dnaW;gene_synonym=ECK0468;gene_synonym=JW0463;gene_synonym=plsA;db_xref=EcoGene:EG10032 EMBL CDS 497175 497819 . + 0 ID=.1038;gene=adk;locus_tag=b0474;gene_synonym=dnaW;gene_synonym=ECK0468;gene_synonym=JW0463;gene_synonym=plsA;ec_number=2.7.4.3;function=enzyme%3B Purine ribonucleotide biosynthesis;experiment=N-terminus verified by Edman degradation: PMID 3027060%2C8650159%2C9298646%2C9600841;note=adenylate kinase activity%3B pleiotropic effects on glycerol-3-phosphate acyltransferase activity%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion%3B GO_process: GO:0009152 - purine ribonucleotide biosynthetic process;codon_start=1;transl_table=11;product=adenylate kinase;protein_id=AAC73576.1;db_xref=GI:1786680;db_xref=ASAP:ABE-0001645;db_xref=UniProtKB/Swiss-Prot:P69441;db_xref=EcoGene:EG10032 EMBL repeat_region 497916 497933 . + . ID=.1039;note=REP45 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 498055 499017 . + . ID=.1040;gene=hemH;locus_tag=b0475;gene_synonym=ECK0469;gene_synonym=JW0464;gene_synonym=popA;gene_synonym=visA;db_xref=EcoGene:EG10431 EMBL CDS 498055 499017 . + 0 ID=.1041;gene=hemH;locus_tag=b0475;gene_synonym=ECK0469;gene_synonym=JW0464;gene_synonym=popA;gene_synonym=visA;ec_number=4.99.1.1;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Heme%2C porphyrin;experiment=N-terminus verified by Edman degradation: PMID 8056770;note=ferrochelatase: final enzyme of heme biosynthesis;codon_start=1;transl_table=11;product=ferrochelatase;protein_id=AAC73577.1;db_xref=GI:1786681;db_xref=ASAP:ABE-0001649;db_xref=UniProtKB/Swiss-Prot:P23871;db_xref=EcoGene:EG10431 EMBL gene 499014 499973 . - . ID=.1042;gene=aes;locus_tag=b0476;gene_synonym=ECK0470;gene_synonym=JW0465;gene_synonym=ybaC;db_xref=EcoGene:EG11101 EMBL CDS 499014 499973 . - 0 ID=.1043;gene=aes;locus_tag=b0476;gene_synonym=ECK0470;gene_synonym=JW0465;gene_synonym=ybaC;ec_number=3.1.1.-;function=orf%3B Not classified;experiment=N-terminus verified by Edman degradation: PMID 9576853;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=acetyl esterase;protein_id=AAC73578.1;db_xref=GI:1786682;db_xref=ASAP:ABE-0001651;db_xref=UniProtKB/Swiss-Prot:P23872;db_xref=EcoGene:EG11101 EMBL gene 500125 501429 . + . ID=.1044;gene=gsk;locus_tag=b0477;gene_synonym=ECK0471;gene_synonym=JW0466;db_xref=EcoGene:EG11102 EMBL CDS 500125 501429 . + 0 ID=.1045;gene=gsk;locus_tag=b0477;gene_synonym=ECK0471;gene_synonym=JW0466;ec_number=2.7.1.73;function=enzyme%3B Salvage of nucleosides and nucleotides;experiment=N-terminus verified by Edman degradation: PMID 7721718;note=inosine-guanosine kinase%3B GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion;codon_start=1;transl_table=11;product=inosine/guanosine kinase;protein_id=AAC73579.1;db_xref=GI:1786684;db_xref=ASAP:ABE-0001655;db_xref=UniProtKB/Swiss-Prot:P0AEW6;db_xref=EcoGene:EG11102 EMBL repeat_region 501444 501527 . + . ID=.1046;note=REP46 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 501562 503238 . - . ID=.1047;gene=ybaL;locus_tag=b0478;gene_synonym=ECK0472;gene_synonym=JW0467;gene_synonym=ylaA;db_xref=EcoGene:EG12623 EMBL CDS 501562 503238 . - 0 ID=.1048;gene=ybaL;locus_tag=b0478;gene_synonym=ECK0472;gene_synonym=JW0467;gene_synonym=ylaA;function=putative transport%3B Not classified;note=putative transport protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=inner membrane putative NAD(P)-binding transporter;protein_id=AAC73580.1;db_xref=GI:1786685;db_xref=ASAP:ABE-0001658;db_xref=UniProtKB/Swiss-Prot:P39830;db_xref=EcoGene:EG12623 EMBL gene 503476 504696 . - . ID=.1049;gene=fsr;locus_tag=b0479;gene_synonym=ECK0473;gene_synonym=JW0468;db_xref=EcoGene:EG13268 EMBL CDS 503476 504696 . - 0 ID=.1050;gene=fsr;locus_tag=b0479;gene_synonym=ECK0473;gene_synonym=JW0468;function=putative transport%3B Not classified;note=fosmidomycin resistance protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=putative fosmidomycin efflux system protein;protein_id=AAC73581.1;db_xref=GI:1786686;db_xref=ASAP:ABE-0001661;db_xref=UniProtKB/Swiss-Prot:P52067;db_xref=EcoGene:EG13268 EMBL gene 504914 506566 . + . ID=.1051;gene=ushA;locus_tag=b0480;gene_synonym=ECK0474;gene_synonym=JW0469;db_xref=EcoGene:EG11060 EMBL CDS 504914 506566 . + 0 ID=.1052;gene=ushA;locus_tag=b0480;gene_synonym=ECK0474;gene_synonym=JW0469;ec_number=3.6.1.45;function=enzyme%3B Central intermediary metabolism: Sugar-nucleotide biosynthesis%2C conversions;note=UDP-sugar hydrolase (5'-nucleotidase)%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009226 - nucleotide-sugar biosynthetic process;codon_start=1;transl_table=11;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase;protein_id=AAC73582.1;db_xref=GI:1786687;db_xref=ASAP:ABE-0001668;db_xref=UniProtKB/Swiss-Prot:P07024;db_xref=EcoGene:EG11060 EMBL repeat_region 506576 506595 . + . ID=.1053;note=REP47 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 506603 507082 . - . ID=.1054;gene=ybaK;locus_tag=b0481;gene_synonym=ECK0475;gene_synonym=JW0470;gene_synonym=proX;db_xref=EcoGene:EG12454 EMBL CDS 506603 507082 . - 0 ID=.1055;gene=ybaK;locus_tag=b0481;gene_synonym=ECK0475;gene_synonym=JW0470;gene_synonym=proX;codon_start=1;transl_table=11;product=Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase;protein_id=AAC73583.1;db_xref=GI:1786688;db_xref=ASAP:ABE-0001670;db_xref=UniProtKB/Swiss-Prot:P0AAR3;db_xref=EcoGene:EG12454 EMBL gene 507204 507287 . + . ID=.1056;gene=chiX;locus_tag=b4585;gene_synonym=ECK4396;gene_synonym=er13;gene_synonym=micM;gene_synonym=rybC;gene_synonym=sroB;db_xref=EcoGene:EG31175 EMBL ncRNA 507204 507287 . + . ID=.1057;ncrna_class=antisense_RNA;gene=chiX;locus_tag=b4585;gene_synonym=ECK4396;gene_synonym=er13;gene_synonym=micM;gene_synonym=rybC;gene_synonym=sroB;product=sRNA antisense regulator of OM chitoporin ChiP(YbfM)%2C Hfq-dependent;db_xref=EcoGene:EG31175 EMBL gene 507286 508080 . - . ID=.1058;gene=ybaP;locus_tag=b0482;gene_synonym=ECK0476;gene_synonym=JW0471;db_xref=EcoGene:EG13244 EMBL CDS 507286 508080 . - 0 ID=.1059;gene=ybaP;locus_tag=b0482;gene_synonym=ECK0476;gene_synonym=JW0471;note=putative ligase;codon_start=1;transl_table=11;product=TraB family protein;protein_id=AAC73584.1;db_xref=GI:1786689;db_xref=ASAP:ABE-0001673;db_xref=UniProtKB/Swiss-Prot:P77301;db_xref=EcoGene:EG13244 EMBL gene 508218 508559 . + . ID=.1060;gene=ybaQ;locus_tag=b0483;gene_synonym=ECK0477;gene_synonym=JW0472;db_xref=EcoGene:EG13245 EMBL CDS 508218 508559 . + 0 ID=.1061;gene=ybaQ;locus_tag=b0483;gene_synonym=ECK0477;gene_synonym=JW0472;codon_start=1;transl_table=11;product=putative DNA-binding transcriptional regulator;protein_id=AAC73585.2;db_xref=GI:87081745;db_xref=ASAP:ABE-0001677;db_xref=UniProtKB/Swiss-Prot:P0A9T6;db_xref=EcoGene:EG13245 EMBL repeat_region 508582 508817 . + . ID=.1062;note=REP48 (repetitive extragenic palindromic) element%3B contains 5 REP sequences EMBL gene 508875 511379 . - . ID=.1063;gene=copA;locus_tag=b0484;gene_synonym=ECK0478;gene_synonym=JW0473;gene_synonym=ybaR;db_xref=EcoGene:EG13246 EMBL CDS 508875 511379 . - 0 ID=.1064;gene=copA;locus_tag=b0484;gene_synonym=ECK0478;gene_synonym=JW0473;gene_synonym=ybaR;ec_number=3.6.3.4;function=putative enzyme%3B Not classified;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_function: GO:0015662 - ATPase activity%2C coupled to transmembrane movement of ions%2C phosphorylative mechanism;codon_start=1;transl_table=11;product=copper transporter;protein_id=AAC73586.1;db_xref=GI:1786691;db_xref=ASAP:ABE-0001681;db_xref=UniProtKB/Swiss-Prot:Q59385;db_xref=EcoGene:EG13246 EMBL gene 511641 512573 . + . ID=.1065;gene=glsA;locus_tag=b0485;gene_synonym=ECK0479;gene_synonym=glsA1;gene_synonym=JW0474;gene_synonym=ybaS;db_xref=EcoGene:EG13247 EMBL CDS 511641 512573 . + 0 ID=.1066;gene=glsA;locus_tag=b0485;gene_synonym=ECK0479;gene_synonym=glsA1;gene_synonym=JW0474;gene_synonym=ybaS;function=enzyme%3B l-glutamine catabolism;note=putative glutaminase%3B GO_process: GO:0009063 - cellular amino acid catabolic process;codon_start=1;transl_table=11;product=glutaminase 1;protein_id=AAC73587.1;db_xref=GI:1786693;db_xref=ASAP:ABE-0001688;db_xref=UniProtKB/Swiss-Prot:P77454;db_xref=EcoGene:EG13247 EMBL gene 512576 513868 . + . ID=.1067;gene=ybaT;locus_tag=b0486;gene_synonym=ECK0480;gene_synonym=JW0475;db_xref=EcoGene:EG13248 EMBL CDS 512576 513868 . + 0 ID=.1068;gene=ybaT;locus_tag=b0486;gene_synonym=ECK0480;gene_synonym=JW0475;function=putative transport%3B Not classified;note=putative amino acid/amine transport protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009063 - cellular amino acid catabolic process;codon_start=1;transl_table=11;product=putative amino acid transporter;protein_id=AAC73588.1;db_xref=GI:1786694;db_xref=ASAP:ABE-0001690;db_xref=UniProtKB/Swiss-Prot:P77400;db_xref=EcoGene:EG13248 EMBL gene 513993 514400 . + . ID=.1069;gene=cueR;locus_tag=b0487;gene_synonym=ECK0481;gene_synonym=JW0476;gene_synonym=ybbI;db_xref=EcoGene:EG13256 EMBL CDS 513993 514400 . + 0 ID=.1070;gene=cueR;locus_tag=b0487;gene_synonym=ECK0481;gene_synonym=JW0476;gene_synonym=ybbI;function=putative transport%3B Not classified;note=GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=copper-responsive regulon transcriptional regulator;protein_id=AAC73589.1;db_xref=GI:1786695;db_xref=ASAP:ABE-0001693;db_xref=UniProtKB/Swiss-Prot:P0A9G4;db_xref=EcoGene:EG13256 EMBL gene 514401 514859 . - . ID=.1071;gene=ybbJ;locus_tag=b0488;gene_synonym=ECK0482;gene_synonym=JW5065;db_xref=EcoGene:EG13257 EMBL CDS 514401 514859 . - 0 ID=.1072;gene=ybbJ;locus_tag=b0488;gene_synonym=ECK0482;gene_synonym=JW5065;codon_start=1;transl_table=11;product=inner membrane protein%3B stimulator of the QmcA suppressor of ftsH-htpX;protein_id=AAC73590.2;db_xref=GI:145693099;db_xref=ASAP:ABE-0001695;db_xref=UniProtKB/Swiss-Prot:P0AAS3;db_xref=EcoGene:EG13257 EMBL gene 514856 515773 . - . ID=.1073;gene=qmcA;locus_tag=b0489;gene_synonym=ECK0483;gene_synonym=JW0478;gene_synonym=ybbK;db_xref=EcoGene:EG13258 EMBL CDS 514856 515773 . - 0 ID=.1074;gene=qmcA;locus_tag=b0489;gene_synonym=ECK0483;gene_synonym=JW0478;gene_synonym=ybbK;function=putative enzyme%3B Not classified;note=putative protease%3B GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=PHB domain membrane-anchored putative protease;protein_id=AAC73591.1;db_xref=GI:1786697;db_xref=ASAP:ABE-0001697;db_xref=UniProtKB/Swiss-Prot:P0AA53;db_xref=EcoGene:EG13258 EMBL gene 515919 516596 . + . ID=.1075;gene=fetA;locus_tag=b0490;gene_synonym=ECK0484;gene_synonym=JW0479;gene_synonym=ybbL;db_xref=EcoGene:EG13259 EMBL CDS 515919 516596 . + 0 ID=.1076;gene=fetA;locus_tag=b0490;gene_synonym=ECK0484;gene_synonym=JW0479;gene_synonym=ybbL;function=transport%3B Transport of small molecules: Cations;note=putative ATP-binding component of a transport system%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=iron export ABC transporter ATPase%3B peroxide resistance protein;protein_id=AAC73592.1;db_xref=GI:1786698;db_xref=ASAP:ABE-0001703;db_xref=UniProtKB/Swiss-Prot:P77279;db_xref=EcoGene:EG13259 EMBL gene 516583 517362 . + . ID=.1077;gene=fetB;locus_tag=b0491;gene_synonym=ECK0485;gene_synonym=JW5066;gene_synonym=ybbM;db_xref=EcoGene:EG13260 EMBL CDS 516583 517362 . + 0 ID=.1078;gene=fetB;locus_tag=b0491;gene_synonym=ECK0485;gene_synonym=JW5066;gene_synonym=ybbM;function=transport%3B Transport of small molecules: Cations;note=putative metal resistance protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=iron export ABC transporter permease%3B peroxide resistance protein;protein_id=AAC73593.2;db_xref=GI:87081746;db_xref=ASAP:ABE-0001705;db_xref=UniProtKB/Swiss-Prot:P77307;db_xref=EcoGene:EG13260 EMBL repeat_region 517369 517394 . + . ID=.1079;note=REP49 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 517425 518279 . - . ID=.1080;gene=ybbN;locus_tag=b0492;gene_synonym=ECK0486;gene_synonym=JW5067;db_xref=EcoGene:EG13261 EMBL CDS 517425 518279 . - 0 ID=.1081;gene=ybbN;locus_tag=b0492;gene_synonym=ECK0486;gene_synonym=JW5067;function=putative enzyme%3B Not classified;note=putative thioredoxin-like protein;codon_start=1;transl_table=11;product=DnaK co-chaperone%2C thioredoxin-like protein;protein_id=AAC73594.2;db_xref=GI:87081747;db_xref=ASAP:ABE-0001707;db_xref=UniProtKB/Swiss-Prot:P77395;db_xref=EcoGene:EG13261 EMBL gene 518340 519149 . - . ID=.1082;gene=ybbO;locus_tag=b0493;gene_synonym=ECK0487;gene_synonym=JW0482;db_xref=EcoGene:EG13262 EMBL CDS 518340 519149 . - 0 ID=.1083;gene=ybbO;locus_tag=b0493;gene_synonym=ECK0487;gene_synonym=JW0482;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=putative oxidoreductase;protein_id=AAC73595.1;db_xref=GI:1786701;db_xref=ASAP:ABE-0001709;db_xref=UniProtKB/Swiss-Prot:P0AFP4;db_xref=EcoGene:EG13262 EMBL gene 519139 519765 . - . ID=.1084;gene=tesA;locus_tag=b0494;gene_synonym=apeA;gene_synonym=ECK0488;gene_synonym=JW0483;gene_synonym=pldC;db_xref=EcoGene:EG11542 EMBL CDS 519139 519765 . - 0 ID=.1085;gene=tesA;locus_tag=b0494;gene_synonym=apeA;gene_synonym=ECK0488;gene_synonym=JW0483;gene_synonym=pldC;ec_number=3.1.1.5;ec_number=3.1.2.-;function=enzyme%3B Fatty acid and phosphatidic acid biosynthesis;note=acyl-CoA thioesterase I%3B also functions as protease I%3B GO_component: GO:0042597 - periplasmic space;codon_start=1;transl_table=11;product=acyl-CoA thioesterase 1 and protease I and lysophospholipase L1;protein_id=AAC73596.1;db_xref=GI:1786702;db_xref=ASAP:ABE-0001713;db_xref=UniProtKB/Swiss-Prot:P0ADA1;db_xref=EcoGene:EG11542 EMBL gene 519733 520419 . + . ID=.1086;gene=ybbA;locus_tag=b0495;gene_synonym=ECK0489;gene_synonym=JW0484;db_xref=EcoGene:EG11657 EMBL CDS 519733 520419 . + 0 ID=.1087;gene=ybbA;locus_tag=b0495;gene_synonym=ECK0489;gene_synonym=JW0484;function=putative transport%3B Not classified;note=putative ATP-binding component of a transport system%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=putative ABC transporter ATPase;protein_id=AAC73597.1;db_xref=GI:1786703;db_xref=ASAP:ABE-0001717;db_xref=UniProtKB/Swiss-Prot:P0A9T8;db_xref=EcoGene:EG11657 EMBL gene 520416 522830 . + . ID=.1088;gene=ybbP;locus_tag=b0496;gene_synonym=ECK0490;gene_synonym=JW0485;db_xref=EcoGene:EG13263 EMBL CDS 520416 522830 . + 0 ID=.1089;gene=ybbP;locus_tag=b0496;gene_synonym=ECK0490;gene_synonym=JW0485;function=putative enzyme%3B Not classified;note=putative oxidoreductase;codon_start=1;transl_table=11;product=putative ABC transporter permease;protein_id=AAC73598.1;db_xref=GI:1786704;db_xref=ASAP:ABE-0001720;db_xref=UniProtKB/Swiss-Prot:P77504;db_xref=EcoGene:EG13263 EMBL gene 523261 527541 . + . ID=.1090;gene=rhsD;locus_tag=b0497;gene_synonym=ECK0491;gene_synonym=JW0486;db_xref=EcoGene:EG10849 EMBL CDS 523261 527541 . + 0 ID=.1091;gene=rhsD;locus_tag=b0497;gene_synonym=ECK0491;gene_synonym=JW0486;note=rhsD protein in rhs element;codon_start=1;transl_table=11;product=Rhs protein with DUF4329 family putative toxin domain%3B putative neighboring cell growth inhibitor;protein_id=AAC73599.1;db_xref=GI:1786706;db_xref=ASAP:ABE-0001724;db_xref=UniProtKB/Swiss-Prot:P16919;db_xref=EcoGene:EG10849 EMBL gene 527581 527949 . + . ID=.1092;gene=ybbC;locus_tag=b0498;gene_synonym=ECK0492;gene_synonym=JW0487;db_xref=EcoGene:EG11769 EMBL CDS 527581 527949 . + 0 ID=.1093;gene=ybbC;locus_tag=b0498;gene_synonym=ECK0492;gene_synonym=JW0487;codon_start=1;transl_table=11;product=putative immunity protein;protein_id=AAC73600.1;db_xref=GI:1786707;db_xref=ASAP:ABE-0001726;db_xref=UniProtKB/Swiss-Prot:P33668;db_xref=EcoGene:EG11769 EMBL gene 527952 528659 . + . ID=.1094;gene=rhsH;locus_tag=b0499;gene_synonym=ECK0493;gene_synonym=JW0488;gene_synonym=ylbH;pseudo=true;db_xref=EcoGene:EG14327 EMBL CDS 527952 528659 . + 0 ID=.1095;gene=rhsH;locus_tag=b0499;gene_synonym=ECK0493;gene_synonym=JW0488;gene_synonym=ylbH;note=pseudogene%2C Rhs family C-terminal fragment with unique putative toxin domain;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0001729;db_xref=UniProtKB/Swiss-Prot:P77759;db_xref=EcoGene:EG14327 EMBL gene 528640 529130 . + . ID=.1096;gene=ybbD;locus_tag=b0501;gene_synonym=ECK0494;gene_synonym=JW0489;pseudo=true;db_xref=EcoGene:EG11770 EMBL CDS 528640 529130 . + 0 ID=.1097;gene=ybbD;locus_tag=b0501;gene_synonym=ECK0494;gene_synonym=JW0489;note=pseudogene;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0001731;db_xref=UniProtKB/Swiss-Prot:P33669;db_xref=EcoGene:EG11770 EMBL gene 529500 529592 . + . ID=.1098;gene=ylbI;locus_tag=b4632;gene_synonym=ECK4441;pseudo=true;db_xref=EcoGene:EG14349 EMBL CDS 529500 529592 . + 0 ID=.1099;gene=ylbI;locus_tag=b4632;gene_synonym=ECK4441;note=pseudogene%2C Rhs family protein;pseudo=true;codon_start=1;transl_table=11;db_xref=EcoGene:EG14349 EMBL gene 529595 530016 . - . ID=.1100;gene=ylbG;locus_tag=b0502;gene_synonym=ECK0495;gene_synonym=JW5880;pseudo=true;db_xref=EcoGene:EG14285 EMBL biological_region 529595 530016 . - 0 ID=.1101;featflags=type:CDS;gene=ylbG;locus_tag=b0502;gene_synonym=ECK0495;gene_synonym=JW5880;note=pseudogene%2C DNA-binding transcriptional regulator homology;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0001736;db_xref=UniProtKB/Swiss-Prot:P77688;db_xref=EcoGene:EG14285 EMBL CDS 529595 529660 . - 0 Parent=.1101 EMBL CDS 529660 530016 . - 0 Parent=.1101 EMBL gene 530132 531226 . - . ID=.1104;gene=mnmH;locus_tag=b0503;gene_synonym=ECK0496;gene_synonym=JW0491;gene_synonym=selE;gene_synonym=selU;gene_synonym=ybbB;db_xref=EcoGene:EG11768 EMBL CDS 530132 531226 . - 0 ID=.1105;gene=mnmH;locus_tag=b0503;gene_synonym=ECK0496;gene_synonym=JW0491;gene_synonym=selE;gene_synonym=selU;gene_synonym=ybbB;function=enzyme%3B tRNA modification;note=putative capsule anchoring protein;codon_start=1;transl_table=11;product=tRNA 2-selenouridine synthase%2C selenophosphate-dependent;protein_id=AAC73605.1;db_xref=GI:1786712;db_xref=ASAP:ABE-0001740;db_xref=UniProtKB/Swiss-Prot:P33667;db_xref=EcoGene:EG11768 EMBL gene 531295 532221 . - . ID=.1106;gene=allS;locus_tag=b0504;gene_synonym=ECK0497;gene_synonym=glxA1;gene_synonym=JW0492;gene_synonym=ybbS;db_xref=EcoGene:EG13267 EMBL CDS 531295 532221 . - 0 ID=.1107;gene=allS;locus_tag=b0504;gene_synonym=ECK0497;gene_synonym=glxA1;gene_synonym=JW0492;gene_synonym=ybbS;function=regulator%3B Purine nitrogen catabolism;note=putative transcriptional regulator LYSR-type%3B GO_function: GO:0016563 - transcription activator activity%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=allD operon transcriptional activator;protein_id=AAC73606.1;db_xref=GI:1786713;db_xref=ASAP:ABE-0001742;db_xref=UniProtKB/Swiss-Prot:P0ACR0;db_xref=EcoGene:EG13267 EMBL gene 532451 532933 . + . ID=.1108;gene=allA;locus_tag=b0505;gene_synonym=ECK0498;gene_synonym=glxA2;gene_synonym=JW0493;gene_synonym=ybbT;db_xref=EcoGene:EG13615 EMBL CDS 532451 532933 . + 0 ID=.1109;gene=allA;locus_tag=b0505;gene_synonym=ECK0498;gene_synonym=glxA2;gene_synonym=JW0493;gene_synonym=ybbT;ec_number=4.3.2.3;function=enzyme%3B Purine nitrogen catabolism;note=GO_process: GO:0006807 - nitrogen compound metabolic process%3B GO_process: GO:0009442 - allantoin assimilation pathway;codon_start=1;transl_table=11;product=ureidoglycolate lyase%2C releasing urea;protein_id=AAC73607.1;db_xref=GI:1786714;db_xref=ASAP:ABE-0001747;db_xref=UniProtKB/Swiss-Prot:P77731;db_xref=EcoGene:EG13615 EMBL gene 533011 533826 . + . ID=.1110;gene=allR;locus_tag=b0506;gene_synonym=ECK0499;gene_synonym=gclR;gene_synonym=glxA3;gene_synonym=JW0494;gene_synonym=ybbU;db_xref=EcoGene:EG13616 EMBL CDS 533011 533826 . + 0 ID=.1111;gene=allR;locus_tag=b0506;gene_synonym=ECK0499;gene_synonym=gclR;gene_synonym=glxA3;gene_synonym=JW0494;gene_synonym=ybbU;function=regulator%3B Purine nitrogen catabolism;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=glyoxylate-inducible transcriptional repressor of all and gcl operons;protein_id=AAC73608.1;db_xref=GI:1786715;db_xref=ASAP:ABE-0001750;db_xref=UniProtKB/Swiss-Prot:P0ACN4;db_xref=EcoGene:EG13616 EMBL gene 533916 535697 . + . ID=.1112;gene=gcl;locus_tag=b0507;gene_synonym=ECK0500;gene_synonym=JW0495;db_xref=EcoGene:EG11583 EMBL CDS 533916 535697 . + 0 ID=.1113;gene=gcl;locus_tag=b0507;gene_synonym=ECK0500;gene_synonym=JW0495;ec_number=4.1.1.47;function=enzyme%3B Central intermediary metabolism: Pool%2C multipurpose conversions;note=GO_process: GO:0009441 - glycolate metabolic process%3B GO_process: GO:0009442 - allantoin assimilation pathway;codon_start=1;transl_table=11;product=glyoxylate carboligase;protein_id=AAC73609.1;db_xref=GI:1786717;db_xref=ASAP:ABE-0001754;db_xref=UniProtKB/Swiss-Prot:P0AEP7;db_xref=EcoGene:EG11583 EMBL gene 535710 536486 . + . ID=.1114;gene=hyi;locus_tag=b0508;gene_synonym=ECK0501;gene_synonym=gip;gene_synonym=JW0496;gene_synonym=ybbG;db_xref=EcoGene:EG11584 EMBL CDS 535710 536486 . + 0 ID=.1115;gene=hyi;locus_tag=b0508;gene_synonym=ECK0501;gene_synonym=gip;gene_synonym=JW0496;gene_synonym=ybbG;ec_number=5.3.1.22;function=phenotype%3B Not classified;note=GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=hydroxypyruvate isomerase;protein_id=AAC73610.1;db_xref=GI:1786718;db_xref=ASAP:ABE-0001756;db_xref=UniProtKB/Swiss-Prot:P30147;db_xref=EcoGene:EG11584 EMBL gene 536586 537464 . + . ID=.1116;gene=glxR;locus_tag=b0509;gene_synonym=ECK0502;gene_synonym=glxB1;gene_synonym=JW0497;gene_synonym=ybbQ;db_xref=EcoGene:EG13265 EMBL CDS 536586 537464 . + 0 ID=.1117;gene=glxR;locus_tag=b0509;gene_synonym=ECK0502;gene_synonym=glxB1;gene_synonym=JW0497;gene_synonym=ybbQ;ec_number=1.1.1.60;function=putative enzyme%3B Not classified;note=GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0009441 - glycolate metabolic process%3B GO_process: GO:0009442 - allantoin assimilation pathway;codon_start=1;transl_table=11;product=tartronate semialdehyde reductase%2C NADH-dependent;protein_id=AAC73611.1;db_xref=GI:1786719;db_xref=ASAP:ABE-0001759;db_xref=UniProtKB/Swiss-Prot:P77161;db_xref=EcoGene:EG13265 EMBL gene 537633 539087 . + . ID=.1118;gene=ybbW;locus_tag=b0511;gene_synonym=allP;gene_synonym=ECK0504;gene_synonym=glxB2;gene_synonym=JW0499;db_xref=EcoGene:EG13618 EMBL CDS 537633 539087 . + 0 ID=.1119;gene=ybbW;locus_tag=b0511;gene_synonym=allP;gene_synonym=ECK0504;gene_synonym=glxB2;gene_synonym=JW0499;function=putative transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative allantoin transporter;protein_id=AAC73613.2;db_xref=GI:87081749;db_xref=ASAP:ABE-0001764;db_xref=UniProtKB/Swiss-Prot:P75712;db_xref=EcoGene:EG13618 EMBL gene 539147 540508 . + . ID=.1120;gene=allB;locus_tag=b0512;gene_synonym=ECK0505;gene_synonym=glxB3;gene_synonym=JW0500;gene_synonym=ybbX;db_xref=EcoGene:EG13619 EMBL CDS 539147 540508 . + 0 ID=.1121;gene=allB;locus_tag=b0512;gene_synonym=ECK0505;gene_synonym=glxB3;gene_synonym=JW0500;gene_synonym=ybbX;ec_number=3.5.2.5;function=enzyme%3B Purine nitrogen catabolism;note=GO_process: GO:0006807 - nitrogen compound metabolic process%3B GO_process: GO:0009442 - allantoin assimilation pathway;codon_start=1;transl_table=11;product=allantoinase;protein_id=AAC73614.1;db_xref=GI:1786722;db_xref=ASAP:ABE-0001768;db_xref=UniProtKB/Swiss-Prot:P77671;db_xref=EcoGene:EG13619 EMBL gene 540565 541866 . + . ID=.1122;gene=ybbY;locus_tag=b0513;gene_synonym=ECK0506;gene_synonym=glxB4;gene_synonym=JW0501;db_xref=EcoGene:EG13620 EMBL CDS 540565 541866 . + 0 ID=.1123;gene=ybbY;locus_tag=b0513;gene_synonym=ECK0506;gene_synonym=glxB4;gene_synonym=JW0501;function=putative transport%3B Not classified;codon_start=1;transl_table=11;product=putative uracil/xanthine transporter;protein_id=AAC73615.2;db_xref=GI:87081750;db_xref=ASAP:ABE-0001771;db_xref=UniProtKB/Swiss-Prot:P77328;db_xref=EcoGene:EG13620 EMBL gene 541888 543033 . + . ID=.1124;gene=glxK;locus_tag=b0514;gene_synonym=ECK0507;gene_synonym=glxB5;gene_synonym=JW0502;gene_synonym=ybbZ;db_xref=EcoGene:EG13621 EMBL CDS 541888 543033 . + 0 ID=.1125;gene=glxK;locus_tag=b0514;gene_synonym=ECK0507;gene_synonym=glxB5;gene_synonym=JW0502;gene_synonym=ybbZ;ec_number=2.7.1.31;note=GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0009441 - glycolate metabolic process%3B GO_process: GO:0009442 - allantoin assimilation pathway;codon_start=1;transl_table=11;product=glycerate kinase II;protein_id=AAC73616.1;db_xref=GI:1786724;db_xref=ASAP:ABE-0001773;db_xref=UniProtKB/Swiss-Prot:P77364;db_xref=EcoGene:EG13621 EMBL repeat_region 543087 543183 . + . ID=.1126;note=RIP50 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 543261 544046 . - . ID=.1127;gene=allE;locus_tag=b0515;gene_synonym=ECK0508;gene_synonym=glxB6;gene_synonym=JW0503;gene_synonym=ughY;gene_synonym=ylbA;db_xref=EcoGene:EG13622 EMBL CDS 543261 544046 . - 0 ID=.1128;gene=allE;locus_tag=b0515;gene_synonym=ECK0508;gene_synonym=glxB6;gene_synonym=JW0503;gene_synonym=ughY;gene_synonym=ylbA;function=enzyme%3B Purine nitrogen catabolism;codon_start=1;transl_table=11;product=S-ureidoglycine aminohydrolase;protein_id=AAC73617.1;db_xref=GI:1786725;db_xref=ASAP:ABE-0001775;db_xref=UniProtKB/Swiss-Prot:P75713;db_xref=EcoGene:EG13622 EMBL gene 544057 545292 . - . ID=.1129;gene=allC;locus_tag=b0516;gene_synonym=ECK0509;gene_synonym=glxB7;gene_synonym=JW0504;gene_synonym=ylbB;db_xref=EcoGene:EG13623 EMBL CDS 544057 545292 . - 0 ID=.1130;gene=allC;locus_tag=b0516;gene_synonym=ECK0509;gene_synonym=glxB7;gene_synonym=JW0504;gene_synonym=ylbB;ec_number=3.5.3.4;function=enzyme%3B Purine nitrogen catabolism;note=GO_process: GO:0006807 - nitrogen compound metabolic process%3B GO_process: GO:0009442 - allantoin assimilation pathway;codon_start=1;transl_table=11;product=allantoate amidohydrolase;protein_id=AAC73618.1;db_xref=GI:1786726;db_xref=ASAP:ABE-0001777;db_xref=UniProtKB/Swiss-Prot:P77425;db_xref=EcoGene:EG13623 EMBL gene 545314 546363 . - . ID=.1131;gene=allD;locus_tag=b0517;gene_synonym=ECK0510;gene_synonym=glxB8;gene_synonym=JW0505;gene_synonym=ylbC;db_xref=EcoGene:EG13624 EMBL CDS 545314 546363 . - 0 ID=.1132;gene=allD;locus_tag=b0517;gene_synonym=ECK0510;gene_synonym=glxB8;gene_synonym=JW0505;gene_synonym=ylbC;ec_number=1.1.1.154;function=enzyme%3B Purine nitrogen catabolism;note=GO_process: GO:0006807 - nitrogen compound metabolic process%3B GO_process: GO:0009442 - allantoin assimilation pathway;codon_start=1;transl_table=11;product=ureidoglycolate dehydrogenase;protein_id=AAC73619.1;db_xref=GI:1786727;db_xref=ASAP:ABE-0001780;db_xref=UniProtKB/Swiss-Prot:P77555;db_xref=EcoGene:EG13624 EMBL gene 546680 548347 . + . ID=.1133;gene=fdrA;locus_tag=b0518;gene_synonym=ECK0511;gene_synonym=JW0506;gene_synonym=ylbD;db_xref=EcoGene:EG13399 EMBL CDS 546680 548347 . + 0 ID=.1134;gene=fdrA;locus_tag=b0518;gene_synonym=ECK0511;gene_synonym=JW0506;gene_synonym=ylbD;function=transport%3B Protein%2C peptide secretion;note=involved in protein transport%3B multicopy suppressor of dominant negative ftsH mutants%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative NAD(P)-binding acyl-CoA synthetase;protein_id=AAC73620.1;db_xref=GI:1786729;db_xref=ASAP:ABE-0001784;db_xref=UniProtKB/Swiss-Prot:Q47208;db_xref=EcoGene:EG13399 EMBL gene 548357 549616 . + . ID=.1135;gene=ylbE;locus_tag=b4572;gene_synonym=ECK0512;gene_synonym=JW0507;gene_synonym=JW0508;db_xref=EcoGene:EG13398 EMBL CDS 548357 549616 . + 0 ID=.1136;gene=ylbE;locus_tag=b4572;gene_synonym=ECK0512;gene_synonym=JW0507;gene_synonym=JW0508;codon_start=1;transl_table=11;product=NO-induced DUF1116 protein;protein_id=ABD18638.2;db_xref=GI:558094914;db_xref=ASAP:ABE-0001787;db_xref=ASAP:ABE-0285028;db_xref=ASAP:ABE-0285105;db_xref=UniProtKB/Swiss-Prot:P77129;db_xref=EcoGene:EG13398 EMBL gene 549627 550442 . + . ID=.1137;gene=ylbF;locus_tag=b0520;gene_synonym=ECK0513;gene_synonym=JW0509;db_xref=EcoGene:EG13626 EMBL CDS 549627 550442 . + 0 ID=.1138;gene=ylbF;locus_tag=b0520;gene_synonym=ECK0513;gene_synonym=JW0509;function=putative enzyme%3B Purine nitrogen catabolism;note=putative carboxylase;codon_start=1;transl_table=11;product=putative anaerobic allantoin catabolic oxamate carbamoyltransferase%3B DUF2877 family protein;protein_id=AAC73622.1;db_xref=GI:1786731;db_xref=ASAP:ABE-0001789;db_xref=UniProtKB/Swiss-Prot:P0AAS5;db_xref=EcoGene:EG13626 EMBL gene 550439 551332 . + . ID=.1139;gene=ybcF;locus_tag=b0521;gene_synonym=arcC;gene_synonym=ECK0514;gene_synonym=JW0510;db_xref=EcoGene:EG12384 EMBL CDS 550439 551332 . + 0 ID=.1140;gene=ybcF;locus_tag=b0521;gene_synonym=arcC;gene_synonym=ECK0514;gene_synonym=JW0510;function=putative enzyme%3B Purine nitrogen catabolism;note=putative carbamate kinase%3B GO_process: GO:0006526 - arginine biosynthetic process%3B GO_process: GO:0006221 - pyrimidine nucleotide biosynthetic process;codon_start=1;transl_table=11;product=putative carbonate kinase;protein_id=AAC73623.1;db_xref=GI:1786732;db_xref=ASAP:ABE-0001791;db_xref=UniProtKB/Swiss-Prot:P37306;db_xref=EcoGene:EG12384 EMBL repeat_region 551354 551510 . + . ID=.1141;note=REP52 (repetitive extragenic palindromic) element%3B contains 4 REP sequences EMBL gene 551527 552594 . - . ID=.1142;gene=purK;locus_tag=b0522;gene_synonym=ECK0515;gene_synonym=JW0511;gene_synonym=purE2;db_xref=EcoGene:EG10796 EMBL CDS 551527 552594 . - 0 ID=.1143;gene=purK;locus_tag=b0522;gene_synonym=ECK0515;gene_synonym=JW0511;gene_synonym=purE2;ec_number=4.1.1.21;function=enzyme%3B Purine ribonucleotide biosynthesis;experiment=N-terminus verified by Edman degradation: PMID 1534690;note=phosphoribosylaminoimidazole carboxylase %3D AIR carboxylase%2C CO(2)-fixing subunit%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006164 - purine nucleotide biosynthetic process;codon_start=1;transl_table=11;product=N5-carboxyaminoimidazole ribonucleotide synthase;protein_id=AAC73624.1;db_xref=GI:1786733;db_xref=ASAP:ABE-0001794;db_xref=UniProtKB/Swiss-Prot:P09029;db_xref=EcoGene:EG10796 EMBL gene 552591 553100 . - . ID=.1144;gene=purE;locus_tag=b0523;gene_synonym=ade;gene_synonym=ade3;gene_synonym=ECK0516;gene_synonym=JW0512;gene_synonym=Pur2;db_xref=EcoGene:EG10793 EMBL CDS 552591 553100 . - 0 ID=.1145;gene=purE;locus_tag=b0523;gene_synonym=ade;gene_synonym=ade3;gene_synonym=ECK0516;gene_synonym=JW0512;gene_synonym=Pur2;ec_number=4.1.1.21;function=enzyme%3B Purine ribonucleotide biosynthesis;note=phosphoribosylaminoimidazole carboxylase %3D AIR carboxylase%2C catalytic subunit%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006164 - purine nucleotide biosynthetic process;codon_start=1;transl_table=11;product=N5-carboxyaminoimidazole ribonucleotide mutase;protein_id=AAC73625.1;db_xref=GI:1786734;db_xref=ASAP:ABE-0001796;db_xref=UniProtKB/Swiss-Prot:P0AG18;db_xref=EcoGene:EG10793 EMBL gene 553218 553940 . - . ID=.1146;gene=lpxH;locus_tag=b0524;gene_synonym=ECK0517;gene_synonym=JW0513;gene_synonym=ybbF;db_xref=EcoGene:EG12666 EMBL CDS 553218 553940 . - 0 ID=.1147;gene=lpxH;locus_tag=b0524;gene_synonym=ECK0517;gene_synonym=JW0513;gene_synonym=ybbF;ec_number=3.6.1.-;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0009245 - lipid A biosynthetic process;codon_start=1;transl_table=11;product=UDP-2%2C3-diacylglucosamine pyrophosphohydrolase;protein_id=AAC73626.1;db_xref=GI:1786735;db_xref=ASAP:ABE-0001804;db_xref=UniProtKB/Swiss-Prot:P43341;db_xref=EcoGene:EG12666 EMBL gene 553943 554437 . - . ID=.1148;gene=ppiB;locus_tag=b0525;gene_synonym=ECK0518;gene_synonym=JW0514;db_xref=EcoGene:EG10758 EMBL CDS 553943 554437 . - 0 ID=.1149;gene=ppiB;locus_tag=b0525;gene_synonym=ECK0518;gene_synonym=JW0514;ec_number=5.2.1.8;function=enzyme%3B Proteins - translation and modification;experiment=N-terminus verified by Edman degradation: PMID 9298646%2C9600841%2C9740056;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=peptidyl-prolyl cis-trans isomerase B (rotamase B);protein_id=AAC73627.1;db_xref=GI:1786736;db_xref=ASAP:ABE-0001806;db_xref=UniProtKB/Swiss-Prot:P23869;db_xref=EcoGene:EG10758 EMBL gene 554611 555996 . + . ID=.1150;gene=cysS;locus_tag=b0526;gene_synonym=ECK0519;gene_synonym=JW0515;db_xref=EcoGene:EG10196 EMBL CDS 554611 555996 . + 0 ID=.1151;gene=cysS;locus_tag=b0526;gene_synonym=ECK0519;gene_synonym=JW0515;ec_number=6.1.1.16;function=enzyme%3B Aminoacyl tRNA synthetases%2C tRNA modification;experiment=N-terminus verified by Edman degradation: PMID 2014166;note=cysteine tRNA synthetase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006418 - tRNA aminoacylation for protein translation;codon_start=1;transl_table=11;product=cysteinyl-tRNA synthetase;protein_id=AAC73628.1;db_xref=GI:1786737;db_xref=ASAP:ABE-0001810;db_xref=UniProtKB/Swiss-Prot:P21888;db_xref=EcoGene:EG10196 EMBL repeat_region 556007 556032 . + . ID=.1152;note=REP53 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 556032 556553 . - . ID=.1153;gene=ybcI;locus_tag=b0527;gene_synonym=ECK0520;gene_synonym=JW0516;db_xref=EcoGene:EG12708 EMBL CDS 556032 556553 . - 0 ID=.1154;gene=ybcI;locus_tag=b0527;gene_synonym=ECK0520;gene_synonym=JW0516;codon_start=1;transl_table=11;product=DUF457 family inner membrane protein;protein_id=AAC73629.1;db_xref=GI:1786738;db_xref=ASAP:ABE-0001812;db_xref=UniProtKB/Swiss-Prot:P45570;db_xref=EcoGene:EG12708 EMBL gene 556661 556873 . - . ID=.1155;gene=ybcJ;locus_tag=b0528;gene_synonym=ECK0521;gene_synonym=JW5070;db_xref=EcoGene:EG12879 EMBL CDS 556661 556873 . - 0 ID=.1156;gene=ybcJ;locus_tag=b0528;gene_synonym=ECK0521;gene_synonym=JW5070;codon_start=1;transl_table=11;product=ribosome-associated protein%3B putative RNA-binding protein;protein_id=AAC73630.2;db_xref=GI:87081752;db_xref=ASAP:ABE-0001816;db_xref=UniProtKB/Swiss-Prot:P0AAS7;db_xref=EcoGene:EG12879 EMBL gene 556875 557741 . - . ID=.1157;gene=folD;locus_tag=b0529;gene_synonym=ads;gene_synonym=ECK0522;gene_synonym=JW0518;db_xref=EcoGene:EG10328 EMBL CDS 556875 557741 . - 0 ID=.1158;gene=folD;locus_tag=b0529;gene_synonym=ads;gene_synonym=ECK0522;gene_synonym=JW0518;ec_number=1.5.1.5;ec_number=3.5.4.9;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Folic acid;note=5%2C10-methylene-tetrahydrofolate dehydrogenase%3B 5%2C10-methylene-tetrahydrofolate cyclohydrolase%3B GO_process: GO:0046656 - folic acid biosynthetic process;codon_start=1;transl_table=11;product=bifunctional 5%2C10-methylene-tetrahydrofolate dehydrogenase/ 5%2C10-methylene-tetrahydrofolate cyclohydrolase;protein_id=AAC73631.1;db_xref=GI:1786741;db_xref=ASAP:ABE-0001818;db_xref=UniProtKB/Swiss-Prot:P24186;db_xref=EcoGene:EG10328 EMBL gene 558212 558754 . + . ID=.1159;gene=sfmA;locus_tag=b0530;gene_synonym=ECK0523;gene_synonym=fimA;gene_synonym=JW0519;db_xref=EcoGene:EG13881 EMBL CDS 558212 558754 . + 0 ID=.1160;gene=sfmA;locus_tag=b0530;gene_synonym=ECK0523;gene_synonym=fimA;gene_synonym=JW0519;function=putative structural component%3B Surface structures;note=putative fimbrial-like protein%3B GO_component: GO:0009289 - pilus;codon_start=1;transl_table=11;product=FimA homolog%2C function unknown;protein_id=AAC73632.2;db_xref=GI:87081753;db_xref=ASAP:ABE-0001825;db_xref=UniProtKB/Swiss-Prot:P0ABW5;db_xref=EcoGene:EG13881 EMBL gene 558974 559666 . + . ID=.1161;gene=sfmC;locus_tag=b0531;gene_synonym=ECK0524;gene_synonym=fimC;gene_synonym=JW0520;db_xref=EcoGene:EG13882 EMBL CDS 558974 559666 . + 0 ID=.1162;gene=sfmC;locus_tag=b0531;gene_synonym=ECK0524;gene_synonym=fimC;gene_synonym=JW0520;function=putative factor%3B Surface structures;note=putative chaperone%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=putative periplasmic pilus chaperone;protein_id=AAC73633.1;db_xref=GI:1786743;db_xref=ASAP:ABE-0001828;db_xref=UniProtKB/Swiss-Prot:P77249;db_xref=EcoGene:EG13882 EMBL gene 559697 562300 . + . ID=.1163;gene=sfmD;locus_tag=b0532;gene_synonym=ECK0525;gene_synonym=fimD;gene_synonym=JW0521;db_xref=EcoGene:EG13883 EMBL CDS 559697 562300 . + 0 ID=.1164;gene=sfmD;locus_tag=b0532;gene_synonym=ECK0525;gene_synonym=fimD;gene_synonym=JW0521;function=membrane%3B Outer membrane constituents;note=putative outer membrane protein%2C export function%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane;codon_start=1;transl_table=11;product=putative outer membrane export usher protein;protein_id=AAC73634.1;db_xref=GI:1786744;db_xref=ASAP:ABE-0001830;db_xref=UniProtKB/Swiss-Prot:P77468;db_xref=EcoGene:EG13883 EMBL gene 562336 563319 . + . ID=.1165;gene=sfmH;locus_tag=b0533;gene_synonym=ECK0526;gene_synonym=fimH;gene_synonym=JW5071;db_xref=EcoGene:EG13884 EMBL CDS 562336 563319 . + 0 ID=.1166;gene=sfmH;locus_tag=b0533;gene_synonym=ECK0526;gene_synonym=fimH;gene_synonym=JW5071;function=putative structural component%3B Surface structures;note=involved in fimbrial asembly%3B GO_component: GO:0019861 - flagellum%3B GO_process: GO:0009296 - flagellum assembly%3B GO_process: GO:0042330 - taxis;codon_start=1;transl_table=11;product=FimA homolog%2C function unknown;protein_id=AAC73635.2;db_xref=GI:145693100;db_xref=ASAP:ABE-0001832;db_xref=UniProtKB/Swiss-Prot:P75715;db_xref=EcoGene:EG13884 EMBL gene 563330 563845 . + . ID=.1167;gene=sfmF;locus_tag=b0534;gene_synonym=ECK0527;gene_synonym=fimF;gene_synonym=JW5072;gene_synonym=ybcG;db_xref=EcoGene:EG12388 EMBL CDS 563330 563845 . + 0 ID=.1168;gene=sfmF;locus_tag=b0534;gene_synonym=ECK0527;gene_synonym=fimF;gene_synonym=JW5072;gene_synonym=ybcG;function=putative structural component%3B Surface structures;note=putative fimbrial-like protein%3B GO_component: GO:0009289 - pilus;codon_start=1;transl_table=11;product=FimA homolog%2C function unknown;protein_id=AAC73636.1;db_xref=GI:1786746;db_xref=ASAP:ABE-0001834;db_xref=UniProtKB/Swiss-Prot:P38052;db_xref=EcoGene:EG12388 EMBL gene 563848 564480 . - . ID=.1169;gene=sfmZ;locus_tag=b0535;gene_synonym=ECK0528;gene_synonym=fimZ;gene_synonym=JW5073;gene_synonym=ybcA;db_xref=EcoGene:EG11103 EMBL CDS 563848 564480 . - 0 ID=.1170;gene=sfmZ;locus_tag=b0535;gene_synonym=ECK0528;gene_synonym=fimZ;gene_synonym=JW5073;gene_synonym=ybcA;function=putative regulator%3B Surface structures;note=fimbrial Z protein%3B probable signal transducer%3B GO_component: GO:0009289 - pilus%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=response regulator family protein;protein_id=AAC73637.1;db_xref=GI:1786747;db_xref=ASAP:ABE-0001836;db_xref=UniProtKB/Swiss-Prot:P0AEL8;db_xref=EcoGene:EG11103 EMBL gene 564723 564799 . + . ID=.1171;gene=argU;locus_tag=b0536;gene_synonym=dnaY;gene_synonym=ECK0529;gene_synonym=fimU;gene_synonym=JWR0010;gene_synonym=pin;db_xref=EcoGene:EG30014 EMBL tRNA 564723 564799 . + . ID=.1172;gene=argU;locus_tag=b0536;gene_synonym=dnaY;gene_synonym=ECK0529;gene_synonym=fimU;gene_synonym=JWR0010;gene_synonym=pin;product=tRNA-Arg;note=anticodon: UCU;db_xref=ASAP:ABE-0001840;db_xref=EcoGene:EG30014 EMBL sequence_feature 564802 586103 . + . ID=.1173;note=cryptic prophage DLP12 EMBL gene 564815 565978 . - . ID=.1174;gene=intD;locus_tag=b0537;gene_synonym=ECK0530;gene_synonym=int;gene_synonym=JW0525;db_xref=EcoGene:EG10507 EMBL CDS 564815 565978 . - 0 ID=.1175;gene=intD;locus_tag=b0537;gene_synonym=ECK0530;gene_synonym=int;gene_synonym=JW0525;function=IS%2C phage%2C Tn%3B Phage or Prophage Related;note=prophage DLP12 integrase;codon_start=1;transl_table=11;product=DLP12 prophage%3B putative phage integrase;protein_id=AAC73638.1;db_xref=GI:1786748;db_xref=ASAP:ABE-0001842;db_xref=UniProtKB/Swiss-Prot:P24218;db_xref=EcoGene:EG10507 EMBL gene 565858 566079 . - . ID=.1176;gene=xisD;locus_tag=b4633;gene_synonym=ECK4435;gene_synonym=ybcB;pseudo=true;db_xref=EcoGene:EG12348 EMBL CDS 565858 566079 . - 0 ID=.1177;gene=xisD;locus_tag=b4633;gene_synonym=ECK4435;gene_synonym=ybcB;note=pseudogene%2C exisionase in defective prophage DLP12%3BPhage or Prophage Related;pseudo=true;codon_start=1;transl_table=11;db_xref=EcoGene:EG12348 EMBL gene 566098 566376 . - . ID=.1178;gene=exoD;locus_tag=b0539;gene_synonym=ECK0531;gene_synonym=JW0526;gene_synonym=ybcC;pseudo=true;db_xref=EcoGene:EG12349 EMBL CDS 566098 566376 . - 0 ID=.1179;gene=exoD;locus_tag=b0539;gene_synonym=ECK0531;gene_synonym=JW0526;gene_synonym=ybcC;note=pseudogene%2C DLP12 prophage%3B phage-type exonuclease family%3BPhage or Prophage Related;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0001850;db_xref=UniProtKB/Swiss-Prot:P75717;db_xref=EcoGene:EG12349 EMBL gene 566376 566687 . + . ID=.1180;gene=peaD;locus_tag=b4508;gene_synonym=ECK0532;gene_synonym=JW0527;gene_synonym=ybcD;pseudo=true;db_xref=EcoGene:EG12350 EMBL CDS 566376 566687 . + 0 ID=.1181;gene=peaD;locus_tag=b4508;gene_synonym=ECK0532;gene_synonym=JW0527;gene_synonym=ybcD;note=pseudogene%3B DLP12 prophage%3B replication protein family%3BPhage or Prophage Related%3B GO_component: GO:0005737 - cytoplasm;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0285029;db_xref=UniProtKB/Swiss-Prot:P77528;db_xref=EcoGene:EG12350 EMBL biological_region 566684 568247 . + . ID=.1182;featflags=type:gene;gene=renD;locus_tag=b0542;gene_synonym=ECK0533;gene_synonym=JW0530;gene_synonym=ybcE;pseudo=true;db_xref=EcoGene:EG12351 EMBL gene 566684 566776 . + . Parent=.1182 EMBL gene 568035 568247 . + . Parent=.1182 EMBL biological_region 566684 568247 . + 0 ID=.1185;featflags=type:CDS;gene=renD;locus_tag=b0542;gene_synonym=ECK0533;gene_synonym=JW0530;gene_synonym=ybcE;note=pseudogene%2C DLP12 prophage%3BPhage or Prophage Related;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0001860;db_xref=UniProtKB/Swiss-Prot:P75718;db_xref=EcoGene:EG12351 EMBL CDS 566684 566776 . + 0 Parent=.1185 EMBL CDS 568035 568247 . + 0 Parent=.1185 EMBL sequence_feature 566777 568034 . + . ID=.1188;note=*mobile_element_type: insertion sequence:IS3C EMBL gene 566842 567141 . + . ID=.1189;gene=insE1;locus_tag=b0540;gene_synonym=ECK0298;db_xref=EcoGene:EG40005 EMBL CDS 566842 567141 . + 0 ID=.1190;gene=insE1;locus_tag=b0540;gene_synonym=ECK0298;function=IS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;codon_start=1;transl_table=11;product=IS3 transposase A;protein_id=AAC73641.2;db_xref=GI:226510930;db_xref=ASAP:ABE-0001855;db_xref=UniProtKB/Swiss-Prot:P0CF68;db_xref=EcoGene:EG40005 EMBL gene 567138 568004 . + . ID=.1191;gene=insF1;locus_tag=b0541;gene_synonym=ECK0299;db_xref=EcoGene:EG40006 EMBL CDS 567138 568004 . + 0 ID=.1192;gene=insF1;locus_tag=b0541;gene_synonym=ECK0299;function=IS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;codon_start=1;transl_table=11;product=IS3 transposase B;protein_id=AAC73642.1;db_xref=GI:1786753;db_xref=ASAP:ABE-0001857;db_xref=UniProtKB/Swiss-Prot:P0CF81;db_xref=EcoGene:EG40006 EMBL gene 568315 568647 . + . ID=.1193;gene=emrE;locus_tag=b0543;gene_synonym=eb;gene_synonym=ECK0534;gene_synonym=JW0531;gene_synonym=mvrC;db_xref=EcoGene:EG10629 EMBL CDS 568315 568647 . + 0 ID=.1194;gene=emrE;locus_tag=b0543;gene_synonym=eb;gene_synonym=ECK0534;gene_synonym=JW0531;gene_synonym=mvrC;function=transport%3B Drug/analog sensitivity%3B Phage or Prophage Related;note=methylviologen resistance%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=DLP12 prophage%3B multidrug resistance protein;protein_id=AAC73644.1;db_xref=GI:1786755;db_xref=ASAP:ABE-0001863;db_xref=UniProtKB/Swiss-Prot:P23895;db_xref=EcoGene:EG10629 EMBL gene 568902 570428 . + . ID=.1195;gene=ybcK;locus_tag=b0544;gene_synonym=ECK0535;gene_synonym=JW0532;db_xref=EcoGene:EG13627 EMBL CDS 568902 570428 . + 0 ID=.1196;gene=ybcK;locus_tag=b0544;gene_synonym=ECK0535;gene_synonym=JW0532;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=DLP12 prophage%3B putative recombinase;protein_id=AAC73645.1;db_xref=GI:1786756;db_xref=ASAP:ABE-0001866;db_xref=UniProtKB/Swiss-Prot:P77698;db_xref=EcoGene:EG13627 EMBL gene 570893 571444 . + . ID=.1197;gene=ybcL;locus_tag=b0545;gene_synonym=ECK0536;gene_synonym=JW0533;db_xref=EcoGene:EG13628 EMBL CDS 570893 571444 . + 0 ID=.1198;gene=ybcL;locus_tag=b0545;gene_synonym=ECK0536;gene_synonym=JW0533;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=inactive polymorphonuclear leukocyte migration suppressor%3B DLP12 prophage%3B UPF0098 family secreted protein;protein_id=AAC73646.1;db_xref=GI:1786757;db_xref=ASAP:ABE-0001869;db_xref=UniProtKB/Swiss-Prot:P77368;db_xref=EcoGene:EG13628 EMBL gene 571454 572251 . + . ID=.1199;gene=ybcM;locus_tag=b0546;gene_synonym=ECK0537;gene_synonym=JW0534;db_xref=EcoGene:EG13629 EMBL CDS 571454 572251 . + 0 ID=.1200;gene=ybcM;locus_tag=b0546;gene_synonym=ECK0537;gene_synonym=JW0534;function=Phage or Prophage Related;note=putative ARAC-type regulatory protein;codon_start=1;transl_table=11;product=DLP12 prophage%3B putative DNA-binding transcriptional regulator;protein_id=AAC73647.1;db_xref=GI:1786758;db_xref=ASAP:ABE-0001871;db_xref=UniProtKB/Swiss-Prot:P77634;db_xref=EcoGene:EG13629 EMBL gene 572368 572469 . + . ID=.1201;gene=ylcH;locus_tag=b4588;gene_synonym=ECK4398;db_xref=EcoGene:EG14355 EMBL CDS 572368 572469 . + 0 ID=.1202;gene=ylcH;locus_tag=b4588;gene_synonym=ECK4398;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=uncharacterized protein%2C DLP12 prophage;protein_id=ABP93435.1;db_xref=GI:145693101;db_xref=UniProtKB/Swiss-Prot:Q47268;db_xref=EcoGene:EG14355 EMBL gene 572466 572921 . + . ID=.1203;gene=ybcN;locus_tag=b0547;gene_synonym=ECK0538;gene_synonym=JW0535;db_xref=EcoGene:EG13630 EMBL CDS 572466 572921 . + 0 ID=.1204;gene=ybcN;locus_tag=b0547;gene_synonym=ECK0538;gene_synonym=JW0535;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=DLP12 prophage%3B uncharacterized protein;protein_id=AAC73648.1;db_xref=GI:1786759;db_xref=ASAP:ABE-0001874;db_xref=UniProtKB/Swiss-Prot:Q47269;db_xref=EcoGene:EG13630 EMBL gene 572921 573091 . + . ID=.1205;gene=ninE;locus_tag=b0548;gene_synonym=ECK0539;gene_synonym=JW0536;db_xref=EcoGene:EG14286 EMBL CDS 572921 573091 . + 0 ID=.1206;gene=ninE;locus_tag=b0548;gene_synonym=ECK0539;gene_synonym=JW0536;function=Phage or Prophage Related;note=similar to phage 82 and lambda proteins;codon_start=1;transl_table=11;product=DLP12 prophage%3B conserved protein;protein_id=AAC73649.1;db_xref=GI:1786760;db_xref=ASAP:ABE-0001876;db_xref=UniProtKB/Swiss-Prot:Q47270;db_xref=EcoGene:EG14286 EMBL gene 573084 573374 . + . ID=.1207;gene=ybcO;locus_tag=b0549;gene_synonym=ECK0540;gene_synonym=JW0537;db_xref=EcoGene:EG13631 EMBL CDS 573084 573374 . + 0 ID=.1208;gene=ybcO;locus_tag=b0549;gene_synonym=ECK0540;gene_synonym=JW0537;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=DLP12 prophage%3B uncharacterized protein;protein_id=AAC73650.1;db_xref=GI:1786761;db_xref=ASAP:ABE-0001878;db_xref=UniProtKB/Swiss-Prot:P68661;db_xref=EcoGene:EG13631 EMBL gene 573371 573733 . + . ID=.1209;gene=rusA;locus_tag=b0550;gene_synonym=ECK0541;gene_synonym=JW0538;gene_synonym=rus;gene_synonym=ybcP;db_xref=EcoGene:EG20283 EMBL CDS 573371 573733 . + 0 ID=.1210;gene=rusA;locus_tag=b0550;gene_synonym=ECK0541;gene_synonym=JW0538;gene_synonym=rus;gene_synonym=ybcP;ec_number=3.1.22.-;function=enzyme%3B Degradation of DNA%3B Phage or Prophage Related;experiment=N-terminus verified by Edman degradation: PMID 7813450;note=endodeoxyribonuclease RUS (Holliday junction resolvase)%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006308 - DNA catabolic process%3B GO_process: GO:0006281 - DNA repair;codon_start=1;transl_table=11;product=DLP12 prophage%3B endonuclease RUS;protein_id=AAC73651.1;db_xref=GI:1786762;db_xref=ASAP:ABE-0001880;db_xref=UniProtKB/Swiss-Prot:P0AG74;db_xref=EcoGene:EG20283 EMBL gene 573730 573870 . + . ID=.1211;gene=ylcG;locus_tag=b4509;gene_synonym=ECK0542;gene_synonym=JW5076;db_xref=EcoGene:EG14354 EMBL CDS 573730 573870 . + 0 ID=.1212;gene=ylcG;locus_tag=b4509;gene_synonym=ECK0542;gene_synonym=JW5076;function=Phage or Prophage Related;note=GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=uncharacterized protein%2C DLP12 prophage;protein_id=ABD18639.1;db_xref=GI:87081756;db_xref=ASAP:ABE-0285030;db_xref=UniProtKB/Swiss-Prot:Q47272;db_xref=EcoGene:EG14354 EMBL gene 573956 574339 . + . ID=.1213;gene=quuD;locus_tag=b0551;gene_synonym=ECK0543;gene_synonym=JW0539;gene_synonym=ybcQ;db_xref=EcoGene:EG13633 EMBL CDS 573956 574339 . + 0 ID=.1214;gene=quuD;locus_tag=b0551;gene_synonym=ECK0543;gene_synonym=JW0539;gene_synonym=ybcQ;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=DLP12 prophage%3B putative antitermination protein;protein_id=AAC73652.1;db_xref=GI:1786763;db_xref=ASAP:ABE-0001883;db_xref=UniProtKB/Swiss-Prot:Q47274;db_xref=EcoGene:EG13633 EMBL biological_region 574529 576825 . - . ID=.1215;featflags=type:gene;gene=nmpC;locus_tag=b0553;gene_synonym=ECK0544;gene_synonym=JW5078;gene_synonym=phmA;pseudo=true;db_xref=EcoGene:EG10659 EMBL gene 574529 574586 . - . Parent=.1215 EMBL gene 575786 576825 . - . Parent=.1215 EMBL biological_region 574529 576825 . - 0 ID=.1218;featflags=type:CDS;gene=nmpC;locus_tag=b0553;gene_synonym=ECK0544;gene_synonym=JW5078;gene_synonym=phmA;note=DLP12 prophage%3B truncated outer membrane porin (pseudogene)%3BIS%2C phage%2C Tn%3B Phage or Prophage Related%3B outer membrane porin protein%3B locus of qsr prophage;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0001888;db_xref=UniProtKB/Swiss-Prot:P21420;db_xref=EcoGene:EG10659 EMBL CDS 574529 574586 . - 0 Parent=.1218 EMBL CDS 575786 576825 . - 0 Parent=.1218 EMBL sequence_feature 574591 575785 . - . ID=.1221;note=*mobile_element_type: insertion sequence:IS5B EMBL gene 574737 575753 . - . ID=.1222;gene=insH1;locus_tag=b0552;gene_synonym=ECK0261;db_xref=EcoGene:EG40008 EMBL CDS 574737 575753 . - 0 ID=.1223;gene=insH1;locus_tag=b0552;gene_synonym=ECK0261;function=IS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;codon_start=1;transl_table=11;product=IS5 transposase and trans-activator;protein_id=AAC73653.1;db_xref=GI:1786764;db_xref=ASAP:ABE-0001886;db_xref=UniProtKB/Swiss-Prot:P0CE50;db_xref=EcoGene:EG40008 EMBL gene 577398 577613 . + . ID=.1224;gene=essD;locus_tag=b0554;gene_synonym=ECK0545;gene_synonym=JW0543;gene_synonym=ybcR;db_xref=EcoGene:EG13634 EMBL CDS 577398 577613 . + 0 ID=.1225;gene=essD;locus_tag=b0554;gene_synonym=ECK0545;gene_synonym=JW0543;gene_synonym=ybcR;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=DLP12 prophage%3B putative phage lysis protein;protein_id=AAC73655.1;db_xref=GI:1786767;db_xref=ASAP:ABE-0001895;db_xref=UniProtKB/Swiss-Prot:P0A9R2;db_xref=EcoGene:EG13634 EMBL gene 577613 578110 . + . ID=.1226;gene=rrrD;locus_tag=b0555;gene_synonym=arrD;gene_synonym=ECK0546;gene_synonym=JW0544;gene_synonym=ybcS;db_xref=EcoGene:EG13635 EMBL CDS 577613 578110 . + 0 ID=.1227;gene=rrrD;locus_tag=b0555;gene_synonym=arrD;gene_synonym=ECK0546;gene_synonym=JW0544;gene_synonym=ybcS;function=Phage or Prophage Related;note=bacteriophage lambda lysozyme homolog;codon_start=1;transl_table=11;product=DLP12 prophage%3B putative lysozyme;protein_id=AAC73656.1;db_xref=GI:1786768;db_xref=ASAP:ABE-0001898;db_xref=UniProtKB/Swiss-Prot:P78285;db_xref=EcoGene:EG13635 EMBL gene 578107 578568 . + . ID=.1228;gene=rzpD;locus_tag=b0556;gene_synonym=ECK0547;gene_synonym=JW5079;gene_synonym=Rz;gene_synonym=ybcT;db_xref=EcoGene:EG13636 EMBL CDS 578107 578568 . + 0 ID=.1229;gene=rzpD;locus_tag=b0556;gene_synonym=ECK0547;gene_synonym=JW5079;gene_synonym=Rz;gene_synonym=ybcT;function=Phage or Prophage Related;note=bacteriophage lambda endopeptidase homolog%3B completely contained in another CDS;codon_start=1;transl_table=11;product=DLP12 prophage%3B putative murein endopeptidase;protein_id=AAC73657.1;db_xref=GI:1786769;db_xref=ASAP:ABE-0001900;db_xref=UniProtKB/Swiss-Prot:P75719;db_xref=EcoGene:EG13636 EMBL gene 578327 578509 . + . ID=.1230;gene=rzoD;locus_tag=b4510;gene_synonym=ECK0548;gene_synonym=JW5080;gene_synonym=Rz1;db_xref=EcoGene:EG14380 EMBL CDS 578327 578509 . + 0 ID=.1231;gene=rzoD;locus_tag=b4510;gene_synonym=ECK0548;gene_synonym=JW5080;gene_synonym=Rz1;function=Phage or Prophage Related;note=completely contained in another CDS%3B GO_component: GO:0009279 - cell outer membrane;codon_start=1;transl_table=11;product=DLP12 prophage%3B putative lipoprotein;protein_id=ABD18640.1;db_xref=GI:87081757;db_xref=ASAP:ABE-0285031;db_xref=UniProtKB/Swiss-Prot:P58041;db_xref=EcoGene:EG14380 EMBL gene 578600 578893 . - . ID=.1232;gene=borD;locus_tag=b0557;gene_synonym=ECK0549;gene_synonym=iss;gene_synonym=JW0546;gene_synonym=ybcU;db_xref=EcoGene:EG13637 EMBL CDS 578600 578893 . - 0 ID=.1233;gene=borD;locus_tag=b0557;gene_synonym=ECK0549;gene_synonym=iss;gene_synonym=JW0546;gene_synonym=ybcU;function=Phage or Prophage Related;note=bacteriophage lambda Bor protein homolog;codon_start=1;transl_table=11;product=DLP12 prophage%3B putative lipoprotein;protein_id=AAC73658.1;db_xref=GI:1786770;db_xref=ASAP:ABE-0001902;db_xref=UniProtKB/Swiss-Prot:P77330;db_xref=EcoGene:EG13637 EMBL gene 579184 579594 . - . ID=.1234;gene=ybcV;locus_tag=b0558;gene_synonym=ECK0550;gene_synonym=JW5081;db_xref=EcoGene:EG13638 EMBL CDS 579184 579594 . - 0 ID=.1235;gene=ybcV;locus_tag=b0558;gene_synonym=ECK0550;gene_synonym=JW5081;function=Phage or Prophage Related;note=putative an envelop protein;codon_start=1;transl_table=11;product=DLP12 prophage%3B uncharacterized protein;protein_id=AAC73659.2;db_xref=GI:87081758;db_xref=ASAP:ABE-0001907;db_xref=UniProtKB/Swiss-Prot:P77598;db_xref=EcoGene:EG13638 EMBL gene 579880 580086 . + . ID=.1236;gene=ybcW;locus_tag=b0559;gene_synonym=ECK0551;gene_synonym=JW0548;db_xref=EcoGene:EG13639 EMBL CDS 579880 580086 . + 0 ID=.1237;gene=ybcW;locus_tag=b0559;gene_synonym=ECK0551;gene_synonym=JW0548;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=DLP12 prophage%3B uncharacterized protein;protein_id=AAC73660.1;db_xref=GI:1786772;db_xref=ASAP:ABE-0001912;db_xref=UniProtKB/Swiss-Prot:P64435;db_xref=EcoGene:EG13639 EMBL gene 580251 580445 . - . ID=.1238;gene=ylcI;locus_tag=b4589;gene_synonym=ECK4399;db_xref=EcoGene:EG14444 EMBL CDS 580251 580445 . - 0 ID=.1239;gene=ylcI;locus_tag=b4589;gene_synonym=ECK4399;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=DUF3950 family protein%2C DLP12 prophage;protein_id=ABP93436.1;db_xref=GI:145693102;db_xref=UniProtKB/Swiss-Prot:A5A607;db_xref=EcoGene:EG14444 EMBL gene 580834 581379 . + . ID=.1240;gene=nohD;locus_tag=b0560;gene_synonym=ECK0552;gene_synonym=JW0549;gene_synonym=nohB;db_xref=EcoGene:EG11635 EMBL CDS 580834 581379 . + 0 ID=.1241;gene=nohD;locus_tag=b0560;gene_synonym=ECK0552;gene_synonym=JW0549;gene_synonym=nohB;function=Phage or Prophage Related;note=bacteriophage DNA packaging protein;codon_start=1;transl_table=11;product=DLP12 prophage%3B DNA packaging protein;protein_id=AAC73661.1;db_xref=GI:1786773;db_xref=ASAP:ABE-0001915;db_xref=UniProtKB/Swiss-Prot:P31062;db_xref=EcoGene:EG11635 EMBL gene 581354 581662 . + . ID=.1242;gene=aaaD;locus_tag=b4634;gene_synonym=ECK4439;gene_synonym=ylcF;pseudo=true;db_xref=EcoGene:EG14346 EMBL CDS 581354 581662 . + 0 ID=.1243;gene=aaaD;locus_tag=b4634;gene_synonym=ECK4439;gene_synonym=ylcF;note=pseudogene%3B DLP12 prophage%3B tail fiber assembly protein family%3BPhage or Prophage Related;pseudo=true;codon_start=1;transl_table=11;db_xref=EcoGene:EG14346 EMBL gene 581660 582097 . + . ID=.1244;gene=tfaD;locus_tag=b0561;gene_synonym=ECK0553;gene_synonym=JW5815;gene_synonym=ybcX;pseudo=true;db_xref=EcoGene:EG13640 EMBL CDS 581660 582097 . + 0 ID=.1245;gene=tfaD;locus_tag=b0561;gene_synonym=ECK0553;gene_synonym=JW5815;gene_synonym=ybcX;note=pseudogene%2C DLP12 prophage%3B tail fiber assembly protein family%3BPhage or Prophage Related;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0001917;db_xref=UniProtKB/Swiss-Prot:P77699;db_xref=EcoGene:EG13640 EMBL gene 582152 582806 . - . ID=.1246;gene=ybcY;locus_tag=b0562;gene_synonym=ECK0554;gene_synonym=JW0551;pseudo=true;db_xref=EcoGene:EG13641 EMBL biological_region 582152 582806 . - 0 ID=.1247;featflags=type:CDS;gene=ybcY;locus_tag=b0562;gene_synonym=ECK0554;gene_synonym=JW0551;note=pseudogene%2C DLP12 prophage%3B methyltransferase homology%3BPhage or Prophage Related;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0001919;db_xref=UniProtKB/Swiss-Prot:P77460;db_xref=EcoGene:EG13641 EMBL CDS 582152 582804 . - 0 Parent=.1247 EMBL CDS 582803 582806 . - 0 Parent=.1247 EMBL gene 582953 583135 . + . ID=.1250;gene=tfaX;locus_tag=b0563;gene_synonym=ECK0555;gene_synonym=JW0552;gene_synonym=ylcE;pseudo=true;db_xref=EcoGene:EG14317 EMBL CDS 582953 583135 . + 0 ID=.1251;gene=tfaX;locus_tag=b0563;gene_synonym=ECK0555;gene_synonym=JW0552;gene_synonym=ylcE;note=pseudogene%2C DLP12 prophage%3BPhage or Prophage Related;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0001926;db_xref=UniProtKB/Swiss-Prot:P77087;db_xref=EcoGene:EG14317 EMBL gene 583681 584430 . + . ID=.1252;gene=appY;locus_tag=b0564;gene_synonym=ECK0556;gene_synonym=JW0553;db_xref=EcoGene:EG10050 EMBL CDS 583681 584430 . + 0 ID=.1253;gene=appY;locus_tag=b0564;gene_synonym=ECK0556;gene_synonym=JW0553;function=regulator%3B Central intermediary metabolism: Pool%2C multipurpose conversions%3B Phage or Prophage Related;note=regulatory protein affecting appA and other genes%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription%3B GO_process: GO:0042594 - response to starvation;codon_start=1;transl_table=11;product=global transcriptional activator%3B DLP12 prophage;protein_id=AAC73665.1;db_xref=GI:1786776;db_xref=ASAP:ABE-0001929;db_xref=UniProtKB/Swiss-Prot:P05052;db_xref=EcoGene:EG10050 EMBL gene 584680 585633 . - . ID=.1254;gene=ompT;locus_tag=b0565;gene_synonym=ECK0557;gene_synonym=JW0554;db_xref=EcoGene:EG10673 EMBL CDS 584680 585633 . - 0 ID=.1255;gene=ompT;locus_tag=b0565;gene_synonym=ECK0557;gene_synonym=JW0554;ec_number=3.4.23.49;function=enzyme%3B Outer membrane constituents%3B Phage or Prophage Related;note=outer membrane protein 3b (a)%2C protease VII%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane;codon_start=1;transl_table=11;product=DLP12 prophage%3B outer membrane protease VII%3B outer membrane protein 3b;protein_id=AAC73666.1;db_xref=GI:1786777;db_xref=ASAP:ABE-0001931;db_xref=UniProtKB/Swiss-Prot:P09169;db_xref=EcoGene:EG10673 EMBL gene 586057 586101 . + . ID=.1256;gene=pauD;locus_tag=b4635;gene_synonym=ECK4463;pseudo=true;db_xref=EcoGene:EG31172 EMBL tRNA 586057 586101 . + . ID=.1257;gene=pauD;locus_tag=b4635;gene_synonym=ECK4463;product=tRNA-OTHER;pseudo=true;db_xref=EcoGene:EG31172 EMBL gene 586147 586908 . - . ID=.1258;gene=envY;locus_tag=b0566;gene_synonym=ECK0558;gene_synonym=JW0555;db_xref=EcoGene:EG10268 EMBL CDS 586147 586908 . - 0 ID=.1259;gene=envY;locus_tag=b0566;gene_synonym=ECK0558;gene_synonym=JW0555;function=structural component%3B Outer membrane constituents;note=envelope protein%3B thermoregulation of porin biosynthesis%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=porin thermoregulatory transcriptional activator;protein_id=AAC73667.1;db_xref=GI:1786778;db_xref=ASAP:ABE-0001935;db_xref=UniProtKB/Swiss-Prot:P10805;db_xref=EcoGene:EG10268 EMBL gene 587091 587981 . - . ID=.1260;gene=ybcH;locus_tag=b0567;gene_synonym=ECK0559;gene_synonym=JW0556;db_xref=EcoGene:EG12448 EMBL CDS 587091 587981 . - 0 ID=.1261;gene=ybcH;locus_tag=b0567;gene_synonym=ECK0559;gene_synonym=JW0556;codon_start=1;transl_table=11;product=PRK09936 family protein;protein_id=AAC73668.1;db_xref=GI:1786779;db_xref=ASAP:ABE-0001937;db_xref=UniProtKB/Swiss-Prot:P37325;db_xref=EcoGene:EG12448 EMBL gene 587982 590954 . - . ID=.1262;gene=nfrA;locus_tag=b0568;gene_synonym=ECK0560;gene_synonym=JW0557;db_xref=EcoGene:EG11740 EMBL CDS 587982 590954 . - 0 ID=.1263;gene=nfrA;locus_tag=b0568;gene_synonym=ECK0560;gene_synonym=JW0557;function=membrane%3B Phage-related functions and prophages;note=bacteriophage N4 receptor%2C outer membrane protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane;codon_start=1;transl_table=11;product=bacteriophage N4 receptor%2C outer membrane subunit;protein_id=AAC73669.1;db_xref=GI:1786780;db_xref=ASAP:ABE-0001939;db_xref=UniProtKB/Swiss-Prot:P31600;db_xref=EcoGene:EG11740 EMBL gene 590941 593178 . - . ID=.1264;gene=nfrB;locus_tag=b0569;gene_synonym=ECK0561;gene_synonym=JW0558;db_xref=EcoGene:EG11739 EMBL CDS 590941 593178 . - 0 ID=.1265;gene=nfrB;locus_tag=b0569;gene_synonym=ECK0561;gene_synonym=JW0558;function=membrane%3B Phage-related functions and prophages;note=bacteriophage N4 receptor%2C subunit%2C inner membrane protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=bacteriophage N4 receptor%2C inner membrane subunit;protein_id=AAC73670.1;db_xref=GI:1786781;db_xref=ASAP:ABE-0001942;db_xref=UniProtKB/Swiss-Prot:P0AFA5;db_xref=EcoGene:EG11739 EMBL gene 593328 594770 . - . ID=.1266;gene=cusS;locus_tag=b0570;gene_synonym=ECK0562;gene_synonym=JW5082;gene_synonym=silS;gene_synonym=ybcZ;db_xref=EcoGene:EG13642 EMBL CDS 593328 594770 . - 0 ID=.1267;gene=cusS;locus_tag=b0570;gene_synonym=ECK0562;gene_synonym=JW5082;gene_synonym=silS;gene_synonym=ybcZ;function=putative regulator%3B Not classified;note=GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=copper-sensing histidine kinase in two-component regulatory system with CusR;protein_id=AAC73671.1;db_xref=GI:1786783;db_xref=ASAP:ABE-0001946;db_xref=UniProtKB/Swiss-Prot:P77485;db_xref=EcoGene:EG13642 EMBL gene 594760 595443 . - . ID=.1268;gene=cusR;locus_tag=b0571;gene_synonym=ECK0563;gene_synonym=JW0560;gene_synonym=silR;gene_synonym=ylcA;db_xref=EcoGene:EG13851 EMBL CDS 594760 595443 . - 0 ID=.1269;gene=cusR;locus_tag=b0571;gene_synonym=ECK0563;gene_synonym=JW0560;gene_synonym=silR;gene_synonym=ylcA;function=putative regulator%3B Not classified;note=GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=response regulator in two-component regulatory system with CusS;protein_id=AAC73672.1;db_xref=GI:1786784;db_xref=ASAP:ABE-0001948;db_xref=UniProtKB/Swiss-Prot:P0ACZ8;db_xref=EcoGene:EG13851 EMBL gene 595600 596973 . + . ID=.1270;gene=cusC;locus_tag=b0572;gene_synonym=ECK0564;gene_synonym=ibeB;gene_synonym=JW0561;gene_synonym=silC;gene_synonym=ylcB;db_xref=EcoGene:EG14233 EMBL CDS 595600 596973 . + 0 ID=.1271;gene=cusC;locus_tag=b0572;gene_synonym=ECK0564;gene_synonym=ibeB;gene_synonym=JW0561;gene_synonym=silC;gene_synonym=ylcB;function=putative transport%3B Drug/analog sensitivity;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane;codon_start=1;transl_table=11;product=copper/silver efflux system%2C outer membrane component;protein_id=AAC73673.1;db_xref=GI:1786785;db_xref=ASAP:ABE-0001958;db_xref=UniProtKB/Swiss-Prot:P77211;db_xref=EcoGene:EG14233 EMBL gene 597131 597463 . + . ID=.1272;gene=cusF;locus_tag=b0573;gene_synonym=cusX;gene_synonym=ECK0565;gene_synonym=JW0562;gene_synonym=silF;gene_synonym=ylcC;db_xref=EcoGene:EG14234 EMBL CDS 597131 597463 . + 0 ID=.1273;gene=cusF;locus_tag=b0573;gene_synonym=cusX;gene_synonym=ECK0565;gene_synonym=JW0562;gene_synonym=silF;gene_synonym=ylcC;codon_start=1;transl_table=11;product=periplasmic copper- and silver-binding protein;protein_id=AAC73674.1;db_xref=GI:1786786;db_xref=ASAP:ABE-0001967;db_xref=UniProtKB/Swiss-Prot:P77214;db_xref=EcoGene:EG14234 EMBL gene 597479 598702 . + . ID=.1274;gene=cusB;locus_tag=b0574;gene_synonym=ECK0566;gene_synonym=JW0563;gene_synonym=silB;gene_synonym=ylcD;db_xref=EcoGene:EG14235 EMBL CDS 597479 598702 . + 0 ID=.1275;gene=cusB;locus_tag=b0574;gene_synonym=ECK0566;gene_synonym=JW0563;gene_synonym=silB;gene_synonym=ylcD;function=putative transport%3B Drug/analog sensitivity;note=GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=copper/silver efflux system%2C membrane fusion protein;protein_id=AAC73675.1;db_xref=GI:1786787;db_xref=ASAP:ABE-0001969;db_xref=UniProtKB/Swiss-Prot:P77239;db_xref=EcoGene:EG14235 EMBL gene 598714 601857 . + . ID=.1276;gene=cusA;locus_tag=b0575;gene_synonym=ECK0567;gene_synonym=JW0564;gene_synonym=silA;gene_synonym=ybdE;db_xref=EcoGene:EG12367 EMBL CDS 598714 601857 . + 0 ID=.1277;gene=cusA;locus_tag=b0575;gene_synonym=ECK0567;gene_synonym=JW0564;gene_synonym=silA;gene_synonym=ybdE;function=putative transport%3B Not classified;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=copper/silver efflux system%2C membrane component;protein_id=AAC73676.1;db_xref=GI:1786788;db_xref=ASAP:ABE-0001971;db_xref=UniProtKB/Swiss-Prot:P38054;db_xref=EcoGene:EG12367 EMBL gene 601959 603335 . + . ID=.1278;gene=pheP;locus_tag=b0576;gene_synonym=ECK0568;gene_synonym=JW0565;db_xref=EcoGene:EG10708 EMBL CDS 601959 603335 . + 0 ID=.1279;gene=pheP;locus_tag=b0576;gene_synonym=ECK0568;gene_synonym=JW0565;function=transport%3B Transport of small molecules: Amino acids%2C amines;note=phenylalanine-specific transport system%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009094 - L-phenylalanine biosynthetic process%3B GO_process: GO:0009063 - cellular amino acid catabolic process;codon_start=1;transl_table=11;product=phenylalanine transporter;protein_id=AAC73677.1;db_xref=GI:1786789;db_xref=ASAP:ABE-0001976;db_xref=UniProtKB/Swiss-Prot:P24207;db_xref=EcoGene:EG10708 EMBL gene 603416 604663 . - . ID=.1280;gene=ybdG;locus_tag=b0577;gene_synonym=ECK0569;gene_synonym=JW0566;gene_synonym=mscM;db_xref=EcoGene:EG12620 EMBL CDS 603416 604663 . - 0 ID=.1281;gene=ybdG;locus_tag=b0577;gene_synonym=ECK0569;gene_synonym=JW0566;gene_synonym=mscM;function=transport%3B Transport of small molecules: Other;note=putative transport%3B GO_component: GO:0042597 - periplasmic space;codon_start=1;transl_table=11;product=mechanosensitive channel protein%2C miniconductance;protein_id=AAC73678.1;db_xref=GI:1786791;db_xref=ASAP:ABE-0001978;db_xref=UniProtKB/Swiss-Prot:P0AAT4;db_xref=EcoGene:EG12620 EMBL gene 604771 605424 . - . ID=.1282;gene=nfsB;locus_tag=b0578;gene_synonym=dprA;gene_synonym=ECK0570;gene_synonym=JW0567;gene_synonym=nfnB;gene_synonym=nfsI;gene_synonym=ntr;db_xref=EcoGene:EG20151 EMBL CDS 604771 605424 . - 0 ID=.1283;gene=nfsB;locus_tag=b0578;gene_synonym=dprA;gene_synonym=ECK0570;gene_synonym=JW0567;gene_synonym=nfnB;gene_synonym=nfsI;gene_synonym=ntr;ec_number=1.5.1.34;function=enzyme%3B Drug/analog sensitivity;experiment=N-terminus verified by Edman degradation: PMID 1472094%2C3060113%2C9298646;note=oxygen-insensitive NAD(P)H nitroreductase%3B GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=dihydropteridine reductase%2C NAD(P)H-dependent%2C oxygen-insensitive;protein_id=AAC73679.1;db_xref=GI:1786792;db_xref=ASAP:ABE-0001981;db_xref=UniProtKB/Swiss-Prot:P38489;db_xref=EcoGene:EG20151 EMBL gene 605518 605886 . - . ID=.1284;gene=ybdF;locus_tag=b0579;gene_synonym=ECK0571;gene_synonym=JW5083;db_xref=EcoGene:EG12619 EMBL CDS 605518 605886 . - 0 ID=.1285;gene=ybdF;locus_tag=b0579;gene_synonym=ECK0571;gene_synonym=JW5083;codon_start=1;transl_table=11;product=DUF419 family protein;protein_id=AAC73680.1;db_xref=GI:1786793;db_xref=ASAP:ABE-0001986;db_xref=UniProtKB/Swiss-Prot:P0AAT2;db_xref=EcoGene:EG12619 EMBL gene 605951 606199 . - . ID=.1286;gene=ybdJ;locus_tag=b0580;gene_synonym=ECK0572;gene_synonym=JW0569;db_xref=EcoGene:EG13643 EMBL CDS 605951 606199 . - 0 ID=.1287;gene=ybdJ;locus_tag=b0580;gene_synonym=ECK0572;gene_synonym=JW0569;codon_start=1;transl_table=11;product=DUF1158 family putative inner membrane protein;protein_id=AAC73681.1;db_xref=GI:1786794;db_xref=ASAP:ABE-0001988;db_xref=UniProtKB/Swiss-Prot:P77506;db_xref=EcoGene:EG13643 EMBL gene 606265 607383 . - . ID=.1288;gene=ybdK;locus_tag=b0581;gene_synonym=ECK0573;gene_synonym=JW0570;db_xref=EcoGene:EG13644 EMBL CDS 606265 607383 . - 0 ID=.1289;gene=ybdK;locus_tag=b0581;gene_synonym=ECK0573;gene_synonym=JW0570;ec_number=6.3.2.2;codon_start=1;transl_table=11;product=weak gamma-glutamyl:cysteine ligase;protein_id=AAC73682.1;db_xref=GI:1786795;db_xref=ASAP:ABE-0001992;db_xref=UniProtKB/Swiss-Prot:P77213;db_xref=EcoGene:EG13644 EMBL gene 607734 607792 . + . ID=.1290;gene=sokE;locus_tag=b4700;gene_synonym=ECK4512;db_xref=EcoGene:EG31186 EMBL ncRNA 607734 607792 . + . ID=.1291;ncrna_class=antisense_RNA;gene=sokE;locus_tag=b4700;gene_synonym=ECK4512;product=sRNA at remnant mokE/hokE locus;db_xref=EcoGene:EG31186 EMBL gene 607836 607988 . + . ID=.1292;gene=hokE;locus_tag=b4415;gene_synonym=ECK0574;gene_synonym=JW5084;gene_synonym=ybdY;db_xref=EcoGene:EG14302 EMBL CDS 607836 607988 . + 0 ID=.1293;gene=hokE;locus_tag=b4415;gene_synonym=ECK0574;gene_synonym=JW5084;gene_synonym=ybdY;function=component of addiction module (incomplete);note=small toxic membrane polypeptide%3B the corresponding mokE lacks a start codon%2C and the regulatory RNA sokE has not been identified;codon_start=1;transl_table=11;product=toxic polypeptide%2C small;protein_id=AAT48125.1;db_xref=GI:48994879;db_xref=ASAP:ABE-0047279;db_xref=UniProtKB/Swiss-Prot:P77091;db_xref=EcoGene:EG14302 EMBL sequence_feature 608007 609351 . + . ID=.1294;note=*mobile_element_type: insertion sequence:IS186B EMBL gene 608065 609177 . + . ID=.1295;gene=insL1;locus_tag=b0582;gene_synonym=ECK0016;db_xref=EcoGene:EG40012 EMBL CDS 608065 609177 . + 0 ID=.1296;gene=insL1;locus_tag=b0582;gene_synonym=ECK0016;function=IS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;codon_start=1;transl_table=11;product=IS186 transposase;protein_id=AAC73683.1;db_xref=GI:1786796;db_xref=ASAP:ABE-0002007;db_xref=UniProtKB/Swiss-Prot:P0CF92;db_xref=EcoGene:EG40012 EMBL gene 609459 610079 . - . ID=.1297;gene=entD;locus_tag=b0583;gene_synonym=ECK0575;gene_synonym=JW5085;db_xref=EcoGene:EG10262 EMBL CDS 609459 610079 . - 0 ID=.1298;gene=entD;locus_tag=b0583;gene_synonym=ECK0575;gene_synonym=JW5085;ec_number=2.7.8.-;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Enterochelin;note=enterochelin synthetase%2C component D%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009239 - enterobactin biosynthetic process;codon_start=1;transl_table=11;product=phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex;protein_id=AAC73684.2;db_xref=GI:345297172;db_xref=ASAP:ABE-0002009;db_xref=UniProtKB/Swiss-Prot:P19925;db_xref=EcoGene:EG10262 EMBL repeat_region 610117 610214 . + . ID=.1299;note=RIP54 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 610254 612494 . - . ID=.1300;gene=fepA;locus_tag=b0584;gene_synonym=cbr;gene_synonym=cbt;gene_synonym=ECK0576;gene_synonym=fep;gene_synonym=feuB;gene_synonym=JW5086;db_xref=EcoGene:EG10293 EMBL CDS 610254 612494 . - 0 ID=.1301;gene=fepA;locus_tag=b0584;gene_synonym=cbr;gene_synonym=cbt;gene_synonym=ECK0576;gene_synonym=fep;gene_synonym=feuB;gene_synonym=JW5086;function=membrane%3B Transport of small molecules: Cations;note=outer membrane receptor for ferric enterobactin (enterochelin) and colicins B and D%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane%3B GO_process: GO:0006826 - iron ion transport;codon_start=1;transl_table=11;product=ferrienterobactin outer membrane transporter;protein_id=AAC73685.1;db_xref=GI:1786798;db_xref=ASAP:ABE-0002014;db_xref=UniProtKB/Swiss-Prot:P05825;db_xref=EcoGene:EG10293 EMBL gene 612737 613939 . + . ID=.1302;gene=fes;locus_tag=b0585;gene_synonym=ECK0577;gene_synonym=JW0576;db_xref=EcoGene:EG10299 EMBL CDS 612737 613939 . + 0 ID=.1303;gene=fes;locus_tag=b0585;gene_synonym=ECK0577;gene_synonym=JW0576;function=enzyme%3B Transport of small molecules: Cations;note=enterochelin esterase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006826 - iron ion transport;codon_start=1;transl_table=11;product=enterobactin/ferrienterobactin esterase;protein_id=AAC73686.2;db_xref=GI:558094915;db_xref=ASAP:ABE-0002019;db_xref=UniProtKB/Swiss-Prot:P13039;db_xref=EcoGene:EG10299 EMBL gene 613942 614160 . + . ID=.1304;gene=ybdZ;locus_tag=b4511;gene_synonym=ECK0578;gene_synonym=JW0577;gene_synonym=mbtH;db_xref=EcoGene:EG14353 EMBL CDS 613942 614160 . + 0 ID=.1305;gene=ybdZ;locus_tag=b4511;gene_synonym=ECK0578;gene_synonym=JW0577;gene_synonym=mbtH;function=Enzyme%3B Biosynthesis of cofactors%2C carriers: Enterochelin;note=GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=stimulator of EntF adenylation activity%2C MbtH-like;protein_id=ABD18641.1;db_xref=GI:87081760;db_xref=ASAP:ABE-0285032;db_xref=UniProtKB/Swiss-Prot:P18393;db_xref=EcoGene:EG14353 EMBL gene 614157 618038 . + . ID=.1306;gene=entF;locus_tag=b0586;gene_synonym=ECK0579;gene_synonym=JW0578;db_xref=EcoGene:EG10264 EMBL CDS 614157 618038 . + 0 ID=.1307;gene=entF;locus_tag=b0586;gene_synonym=ECK0579;gene_synonym=JW0578;ec_number=2.7.7.-;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Enterochelin;experiment=N-terminus verified by Edman degradation: PMID 1826089%2C2974033;note=ATP-dependent serine activating enzyme (may be part of enterobactin synthase as component F)%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009239 - enterobactin biosynthetic process%3B GO_process: GO:0015937 - coenzyme A biosynthetic process%3B GO_process: GO:0019184 - nonribosomal peptide biosynthetic process%3B GO_process: GO:0006826 - iron ion transport;codon_start=1;transl_table=11;product=enterobactin synthase multienzyme complex component%2C ATP-dependent;protein_id=AAC73687.1;db_xref=GI:1786801;db_xref=ASAP:ABE-0002021;db_xref=UniProtKB/Swiss-Prot:P11454;db_xref=EcoGene:EG10264 EMBL gene 618254 619387 . + . ID=.1308;gene=fepE;locus_tag=b0587;gene_synonym=ECK0580;gene_synonym=JW0579;db_xref=EcoGene:EG10297 EMBL CDS 618254 619387 . + 0 ID=.1309;gene=fepE;locus_tag=b0587;gene_synonym=ECK0580;gene_synonym=JW0579;function=transport%3B Transport of small molecules: Cations;note=ferric enterobactin (enterochelin) transport%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006826 - iron ion transport;codon_start=1;transl_table=11;product=regulator of length of O-antigen component of lipopolysaccharide chains;protein_id=AAC73688.1;db_xref=GI:1786802;db_xref=ASAP:ABE-0002023;db_xref=UniProtKB/Swiss-Prot:P26266;db_xref=EcoGene:EG10297 EMBL gene 619384 620199 . - . ID=.1310;gene=fepC;locus_tag=b0588;gene_synonym=ECK0581;gene_synonym=JW0580;db_xref=EcoGene:EG10295 EMBL CDS 619384 620199 . - 0 ID=.1311;gene=fepC;locus_tag=b0588;gene_synonym=ECK0581;gene_synonym=JW0580;function=transport%3B Transport of small molecules: Cations;note=ATP-binding component of ferric enterobactin transport%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006826 - iron ion transport;codon_start=1;transl_table=11;product=ferrienterobactin ABC transporter ATPase;protein_id=AAC73689.1;db_xref=GI:1786803;db_xref=ASAP:ABE-0002025;db_xref=UniProtKB/Swiss-Prot:P23878;db_xref=EcoGene:EG10295 EMBL gene 620196 621188 . - . ID=.1312;gene=fepG;locus_tag=b0589;gene_synonym=ECK0582;gene_synonym=JW0581;db_xref=EcoGene:EG10298 EMBL CDS 620196 621188 . - 0 ID=.1313;gene=fepG;locus_tag=b0589;gene_synonym=ECK0582;gene_synonym=JW0581;function=transport%3B Transport of small molecules: Cations;note=ferric enterobactin transport protein%3B membrane component of ABC superfamily%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006826 - iron ion transport;codon_start=1;transl_table=11;product=iron-enterobactin ABC transporter permease;protein_id=AAC73690.1;db_xref=GI:1786804;db_xref=ASAP:ABE-0002027;db_xref=UniProtKB/Swiss-Prot:P23877;db_xref=EcoGene:EG10298 EMBL gene 621185 622189 . - . ID=.1314;gene=fepD;locus_tag=b0590;gene_synonym=ECK0583;gene_synonym=JW0582;db_xref=EcoGene:EG10296 EMBL CDS 621185 622189 . - 0 ID=.1315;gene=fepD;locus_tag=b0590;gene_synonym=ECK0583;gene_synonym=JW0582;function=transport%3B Transport of small molecules: Cations;note=ferric enterobactin (enterochelin) transport%3B membrane component of ABC superfamily%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006826 - iron ion transport;codon_start=1;transl_table=11;product=ferrienterobactin ABC transporter permease;protein_id=AAC73691.1;db_xref=GI:1786805;db_xref=ASAP:ABE-0002031;db_xref=UniProtKB/Swiss-Prot:P23876;db_xref=EcoGene:EG10296 EMBL gene 622300 623550 . + . ID=.1316;gene=entS;locus_tag=b0591;gene_synonym=ECK0584;gene_synonym=JW0583;gene_synonym=ybdA;db_xref=EcoGene:EG11104 EMBL CDS 622300 623550 . + 0 ID=.1317;gene=entS;locus_tag=b0591;gene_synonym=ECK0584;gene_synonym=JW0583;gene_synonym=ybdA;function=putative transport%3B Not classified;note=putative transport%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=enterobactin exporter%2C iron-regulated;protein_id=AAC73692.1;db_xref=GI:1786806;db_xref=ASAP:ABE-0002036;db_xref=UniProtKB/Swiss-Prot:P24077;db_xref=EcoGene:EG11104 EMBL gene 623554 624510 . - . ID=.1318;gene=fepB;locus_tag=b0592;gene_synonym=ECK0585;gene_synonym=JW0584;db_xref=EcoGene:EG10294 EMBL CDS 623554 624510 . - 0 ID=.1319;gene=fepB;locus_tag=b0592;gene_synonym=ECK0585;gene_synonym=JW0584;function=transport%3B Transport of small molecules: Cations;note=ferric enterobactin (enterochelin) binding protein%3B periplasmic component%3B periplasmic-binding component of ABC superfamily%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0006826 - iron ion transport;codon_start=1;transl_table=11;product=ferrienterobactin ABC transporter periplasmic binding protein;protein_id=AAC73693.1;db_xref=GI:1786807;db_xref=ASAP:ABE-0002038;db_xref=UniProtKB/Swiss-Prot:P0AEL6;db_xref=EcoGene:EG10294 EMBL gene 624885 626060 . + . ID=.1320;gene=entC;locus_tag=b0593;gene_synonym=ECK0586;gene_synonym=fepF;gene_synonym=JW0585;db_xref=EcoGene:EG10261 EMBL CDS 624885 626060 . + 0 ID=.1321;gene=entC;locus_tag=b0593;gene_synonym=ECK0586;gene_synonym=fepF;gene_synonym=JW0585;ec_number=5.4.4.2;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Enterochelin;experiment=N-terminus verified by Edman degradation: PMID 2521622;note=isochorismate hydroxymutase 2%2C enterochelin biosynthesis%3B GO_process: GO:0009239 - enterobactin biosynthetic process;codon_start=1;transl_table=11;product=isochorismate synthase 1;protein_id=AAC73694.1;db_xref=GI:1786809;db_xref=ASAP:ABE-0002047;db_xref=UniProtKB/Swiss-Prot:P0AEJ2;db_xref=EcoGene:EG10261 EMBL gene 626070 627680 . + . ID=.1322;gene=entE;locus_tag=b0594;gene_synonym=ECK0587;gene_synonym=JW0586;db_xref=EcoGene:EG10263 EMBL CDS 626070 627680 . + 0 ID=.1323;gene=entE;locus_tag=b0594;gene_synonym=ECK0587;gene_synonym=JW0586;ec_number=2.7.7.58;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Enterochelin;note=2%2C3-dihydroxybenzoate-AMP ligase%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009239 - enterobactin biosynthetic process%3B GO_process: GO:0019184 - nonribosomal peptide biosynthetic process;codon_start=1;transl_table=11;product=2%2C3-dihydroxybenzoate-AMP ligase component of enterobactin synthase multienzyme complex;protein_id=AAC73695.1;db_xref=GI:1786810;db_xref=ASAP:ABE-0002049;db_xref=UniProtKB/Swiss-Prot:P10378;db_xref=EcoGene:EG10263 EMBL gene 627694 628551 . + . ID=.1324;gene=entB;locus_tag=b0595;gene_synonym=ECK0588;gene_synonym=entG;gene_synonym=JW0587;db_xref=EcoGene:EG10260 EMBL CDS 627694 628551 . + 0 ID=.1325;gene=entB;locus_tag=b0595;gene_synonym=ECK0588;gene_synonym=entG;gene_synonym=JW0587;ec_number=3.3.2.1;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Enterochelin;note=2%2C3-dihydro-2%2C3-dihydroxybenzoate synthetase%2C isochroismatase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009239 - enterobactin biosynthetic process%3B GO_process: GO:0019184 - nonribosomal peptide biosynthetic process;codon_start=1;transl_table=11;product=isochorismatase;protein_id=AAC73696.1;db_xref=GI:1786811;db_xref=ASAP:ABE-0002052;db_xref=UniProtKB/Swiss-Prot:P0ADI4;db_xref=EcoGene:EG10260 EMBL gene 628551 629297 . + . ID=.1326;gene=entA;locus_tag=b0596;gene_synonym=ECK0589;gene_synonym=JW0588;db_xref=EcoGene:EG10259 EMBL CDS 628551 629297 . + 0 ID=.1327;gene=entA;locus_tag=b0596;gene_synonym=ECK0589;gene_synonym=JW0588;ec_number=1.3.1.28;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Enterochelin;experiment=N-terminus verified by Edman degradation: PMID 2521622;note=2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase%2C enterochelin biosynthesis%3B GO_process: GO:0009239 - enterobactin biosynthetic process;codon_start=1;transl_table=11;product=2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase;protein_id=AAC73697.1;db_xref=GI:1786812;db_xref=ASAP:ABE-0002054;db_xref=UniProtKB/Swiss-Prot:P15047;db_xref=EcoGene:EG10259 EMBL gene 629300 629713 . + . ID=.1328;gene=entH;locus_tag=b0597;gene_synonym=ECK0590;gene_synonym=JW0589;gene_synonym=ybdB;db_xref=EcoGene:EG11105 EMBL CDS 629300 629713 . + 0 ID=.1329;gene=entH;locus_tag=b0597;gene_synonym=ECK0590;gene_synonym=JW0589;gene_synonym=ybdB;codon_start=1;transl_table=11;product=enterobactin synthesis proofreading thioesterase;protein_id=AAC73698.1;db_xref=GI:1786813;db_xref=ASAP:ABE-0002057;db_xref=UniProtKB/Swiss-Prot:P0A8Y8;db_xref=EcoGene:EG11105 EMBL gene 629894 631999 . + . ID=.1330;gene=cstA;locus_tag=b0598;gene_synonym=dppG?;gene_synonym=ECK0591;gene_synonym=JW0590;gene_synonym=ybdC;db_xref=EcoGene:EG10167 EMBL CDS 629894 631999 . + 0 ID=.1331;gene=cstA;locus_tag=b0598;gene_synonym=dppG?;gene_synonym=ECK0591;gene_synonym=JW0590;gene_synonym=ybdC;function=putative transport%3B Not classified;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0042594 - response to starvation;codon_start=1;transl_table=11;product=carbon starvation protein involved in peptide utilization%3B APC peptide transporter family protein;protein_id=AAC73699.1;db_xref=GI:1786814;db_xref=ASAP:ABE-0002061;db_xref=UniProtKB/Swiss-Prot:P15078;db_xref=EcoGene:EG10167 EMBL repeat_region 632115 632148 . + . ID=.1332;note=REP55 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 632182 632379 . + . ID=.1333;gene=ybdD;locus_tag=b4512;gene_synonym=ECK0592;gene_synonym=JW0591;db_xref=EcoGene:EG11107 EMBL CDS 632182 632379 . + 0 ID=.1334;gene=ybdD;locus_tag=b4512;gene_synonym=ECK0592;gene_synonym=JW0591;note=GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=DUF466 family protein;protein_id=ABD18642.1;db_xref=GI:87081761;db_xref=ASAP:ABE-0285033;db_xref=UniProtKB/Swiss-Prot:P0AAS9;db_xref=EcoGene:EG11107 EMBL gene 632389 633477 . - . ID=.1335;gene=ybdH;locus_tag=b0599;gene_synonym=ECK0593;gene_synonym=JW0592;db_xref=EcoGene:EG12692 EMBL CDS 632389 633477 . - 0 ID=.1336;gene=ybdH;locus_tag=b0599;gene_synonym=ECK0593;gene_synonym=JW0592;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=putative oxidoreductase;protein_id=AAC73700.1;db_xref=GI:1786815;db_xref=ASAP:ABE-0002065;db_xref=UniProtKB/Swiss-Prot:P45579;db_xref=EcoGene:EG12692 EMBL gene 633586 634746 . + . ID=.1337;gene=ybdL;locus_tag=b0600;gene_synonym=ECK0594;gene_synonym=JW0593;db_xref=EcoGene:EG13531 EMBL CDS 633586 634746 . + 0 ID=.1338;gene=ybdL;locus_tag=b0600;gene_synonym=ECK0594;gene_synonym=JW0593;ec_number=2.6.1.-;function=putative enzyme%3B Not classified;note=PLP-dependent methionine aminotransferase%3B GO_process: GO:0008152 - metabolic process;codon_start=1;transl_table=11;product=methionine aminotransferase%2C PLP-dependent;protein_id=AAC73701.1;db_xref=GI:1786816;db_xref=ASAP:ABE-0002069;db_xref=UniProtKB/Swiss-Prot:P77806;db_xref=EcoGene:EG13531 EMBL gene 634747 635376 . - . ID=.1339;gene=ybdM;locus_tag=b0601;gene_synonym=ECK0595;gene_synonym=JW0594;db_xref=EcoGene:EG13532 EMBL CDS 634747 635376 . - 0 ID=.1340;gene=ybdM;locus_tag=b0601;gene_synonym=ECK0595;gene_synonym=JW0594;codon_start=1;transl_table=11;product=Spo0J family protein%2C ParB-like nuclease domain;protein_id=AAC73702.1;db_xref=GI:1786817;db_xref=ASAP:ABE-0002071;db_xref=UniProtKB/Swiss-Prot:P77174;db_xref=EcoGene:EG13532 EMBL gene 635349 636569 . - . ID=.1341;gene=ybdN;locus_tag=b0602;gene_synonym=ECK0596;gene_synonym=JW0595;db_xref=EcoGene:EG13533 EMBL CDS 635349 636569 . - 0 ID=.1342;gene=ybdN;locus_tag=b0602;gene_synonym=ECK0596;gene_synonym=JW0595;codon_start=1;transl_table=11;product=PAPS reductase-like domain protein;protein_id=AAC73703.1;db_xref=GI:1786818;db_xref=ASAP:ABE-0002073;db_xref=UniProtKB/Swiss-Prot:P77216;db_xref=EcoGene:EG13533 EMBL gene 636716 637618 . - . ID=.1343;gene=ybdO;locus_tag=b0603;gene_synonym=ECK0597;gene_synonym=JW0596;db_xref=EcoGene:EG13534 EMBL CDS 636716 637618 . - 0 ID=.1344;gene=ybdO;locus_tag=b0603;gene_synonym=ECK0597;gene_synonym=JW0596;function=putative regulator%3B Not classified;note=putative transcriptional regulator LYSR-type%3B GO_process: GO:0006350 - transcription%3B GO_process: GO:0006355 - regulation of transcription%2C DNA-dependent;codon_start=1;transl_table=11;product=putative DNA-binding transcriptional regulator;protein_id=AAC73704.1;db_xref=GI:1786820;db_xref=ASAP:ABE-0002077;db_xref=UniProtKB/Swiss-Prot:P77746;db_xref=EcoGene:EG13534 EMBL gene 637827 638573 . - . ID=.1345;gene=dsbG;locus_tag=b0604;gene_synonym=ECK0598;gene_synonym=JW0597;gene_synonym=ybdP;db_xref=EcoGene:EG13535 EMBL CDS 637827 638573 . - 0 ID=.1346;gene=dsbG;locus_tag=b0604;gene_synonym=ECK0598;gene_synonym=JW0597;gene_synonym=ybdP;ec_number=5.3.4.1;function=enzyme%3B Central intermediary metabolism: Pool%2C multipurpose conversions;note=thiol:disulfide interchange protein%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=thiol:disulfide interchange protein%2C periplasmic;protein_id=AAC73705.2;db_xref=GI:87081762;db_xref=ASAP:ABE-0002084;db_xref=UniProtKB/Swiss-Prot:P77202;db_xref=EcoGene:EG13535 EMBL gene 638945 639508 . + . ID=.1347;gene=ahpC;locus_tag=b0605;gene_synonym=ECK0599;gene_synonym=JW0598;gene_synonym=tpx;db_xref=EcoGene:EG11384 EMBL CDS 638945 639508 . + 0 ID=.1348;gene=ahpC;locus_tag=b0605;gene_synonym=ECK0599;gene_synonym=JW0598;gene_synonym=tpx;ec_number=1.11.1.15;function=enzyme%3B Detoxification;note=alkyl hydroperoxide reductase%2C C22 subunit%3B detoxification of hydroperoxides%3B GO_process: GO:0006805 - xenobiotic metabolic process;codon_start=1;transl_table=11;product=alkyl hydroperoxide reductase%2C C22 subunit;protein_id=AAC73706.1;db_xref=GI:1786822;db_xref=ASAP:ABE-0002090;db_xref=UniProtKB/Swiss-Prot:P0AE08;db_xref=EcoGene:EG11384 EMBL gene 639753 641318 . + . ID=.1349;gene=ahpF;locus_tag=b0606;gene_synonym=ECK0600;gene_synonym=JW0599;db_xref=EcoGene:EG11385 EMBL CDS 639753 641318 . + 0 ID=.1350;gene=ahpF;locus_tag=b0606;gene_synonym=ECK0600;gene_synonym=JW0599;ec_number=1.11.1.15;function=enzyme%3B Detoxification;note=alkyl hydroperoxide reductase%2C F52a subunit%3B detoxification of hydroperoxides%3B GO_process: GO:0006805 - xenobiotic metabolic process;codon_start=1;transl_table=11;product=alkyl hydroperoxide reductase%2C F52a subunit%2C FAD/NAD(P)-binding;protein_id=AAC73707.2;db_xref=GI:87081763;db_xref=ASAP:ABE-0002093;db_xref=UniProtKB/Swiss-Prot:P35340;db_xref=EcoGene:EG11385 EMBL gene 641439 641867 . - . ID=.1351;gene=uspG;locus_tag=b0607;gene_synonym=ECK0601;gene_synonym=JW0600;gene_synonym=UP12;gene_synonym=ybdQ;gene_synonym=yzzU;db_xref=EcoGene:EG12683 EMBL CDS 641439 641867 . - 0 ID=.1352;gene=uspG;locus_tag=b0607;gene_synonym=ECK0601;gene_synonym=JW0600;gene_synonym=UP12;gene_synonym=ybdQ;gene_synonym=yzzU;experiment=N-terminus verified by Edman degradation: PMID 8740179%2C9298646%2C9600841;codon_start=1;transl_table=11;product=universal stress protein UP12;protein_id=AAC73708.1;db_xref=GI:1786824;db_xref=ASAP:ABE-0002095;db_xref=UniProtKB/Swiss-Prot:P39177;db_xref=EcoGene:EG12683 EMBL gene 642088 643326 . + . ID=.1353;gene=ybdR;locus_tag=b0608;gene_synonym=ECK0602;gene_synonym=JW0601;db_xref=EcoGene:EG13537 EMBL CDS 642088 643326 . + 0 ID=.1354;gene=ybdR;locus_tag=b0608;gene_synonym=ECK0602;gene_synonym=JW0601;function=putative enzyme%3B Not classified;note=putative oxidoreductase;codon_start=1;transl_table=11;product=putative Zn-dependent NAD(P)-binding oxidoreductase;protein_id=AAC73709.1;db_xref=GI:1786825;db_xref=ASAP:ABE-0002099;db_xref=UniProtKB/Swiss-Prot:P77316;db_xref=EcoGene:EG13537 EMBL gene 643557 643967 . - . ID=.1355;gene=rnk;locus_tag=b0610;gene_synonym=ECK0603;gene_synonym=JW0602;db_xref=EcoGene:EG12637 EMBL CDS 643557 643967 . - 0 ID=.1356;gene=rnk;locus_tag=b0610;gene_synonym=ECK0603;gene_synonym=JW0602;function=regulator%3B Central intermediary metabolism: Nucleotide interconversions;note=GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion;codon_start=1;transl_table=11;product=regulator of nucleoside diphosphate kinase;protein_id=AAC73711.1;db_xref=GI:1786827;db_xref=ASAP:ABE-0002104;db_xref=UniProtKB/Swiss-Prot:P0AFW4;db_xref=EcoGene:EG12637 EMBL gene 644197 645003 . - . ID=.1357;gene=rna;locus_tag=b0611;gene_synonym=ECK0604;gene_synonym=JW0603;gene_synonym=rnsA;db_xref=EcoGene:EG10856 EMBL CDS 644197 645003 . - 0 ID=.1358;gene=rna;locus_tag=b0611;gene_synonym=ECK0604;gene_synonym=JW0603;gene_synonym=rnsA;ec_number=3.1.27.6;function=enzyme%3B Degradation of RNA;note=RNase I%2C cleaves phosphodiester bond between any two nucleotides%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006401 - RNA catabolic process;codon_start=1;transl_table=11;product=ribonuclease I;protein_id=AAC73712.1;db_xref=GI:1786828;db_xref=ASAP:ABE-0002107;db_xref=UniProtKB/Swiss-Prot:P21338;db_xref=EcoGene:EG10856 EMBL gene 645117 646580 . - . ID=.1359;gene=citT;locus_tag=b0612;gene_synonym=ECK0605;gene_synonym=JW0604;gene_synonym=ybdS;db_xref=EcoGene:EG13538 EMBL CDS 645117 646580 . - 0 ID=.1360;gene=citT;locus_tag=b0612;gene_synonym=ECK0605;gene_synonym=JW0604;gene_synonym=ybdS;function=putative membrane%3B Not classified;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=citrate/succinate antiporter%3B citrate carrier;protein_id=AAC73713.1;db_xref=GI:1786829;db_xref=ASAP:ABE-0002110;db_xref=UniProtKB/Swiss-Prot:P0AE74;db_xref=EcoGene:EG13538 EMBL gene 646631 647509 . - . ID=.1361;gene=citG;locus_tag=b0613;gene_synonym=ECK0606;gene_synonym=JW0605;gene_synonym=ybdT;db_xref=EcoGene:EG13539 EMBL CDS 646631 647509 . - 0 ID=.1362;gene=citG;locus_tag=b0613;gene_synonym=ECK0606;gene_synonym=JW0605;gene_synonym=ybdT;ec_number=2.4.2.52;note=GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase;protein_id=AAC73714.1;db_xref=GI:1786830;db_xref=ASAP:ABE-0002114;db_xref=UniProtKB/Swiss-Prot:P77231;db_xref=EcoGene:EG13539 EMBL gene 647484 648035 . - . ID=.1363;gene=citX;locus_tag=b0614;gene_synonym=ECK0607;gene_synonym=JW0606;gene_synonym=ybdU;db_xref=EcoGene:EG13540 EMBL CDS 647484 648035 . - 0 ID=.1364;gene=citX;locus_tag=b0614;gene_synonym=ECK0607;gene_synonym=JW0606;gene_synonym=ybdU;ec_number=2.7.7.61;note=GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=apo-citrate lyase phosphoribosyl-dephospho-CoA transferase;protein_id=AAC73715.1;db_xref=GI:1786831;db_xref=ASAP:ABE-0002116;db_xref=UniProtKB/Swiss-Prot:P0A6G5;db_xref=EcoGene:EG13540 EMBL gene 648039 649571 . - . ID=.1365;gene=citF;locus_tag=b0615;gene_synonym=ECK0608;gene_synonym=JW5087;gene_synonym=ybdV;db_xref=EcoGene:EG13541 EMBL CDS 648039 649571 . - 0 ID=.1366;gene=citF;locus_tag=b0615;gene_synonym=ECK0608;gene_synonym=JW5087;gene_synonym=ybdV;ec_number=2.8.3.10;ec_number=4.1.3.6;function=enzyme%3B Central intermediary metabolism: Pool%2C multipurpose conversions;note=citrate lyase alpha chain%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=citrate lyase%2C citrate-ACP transferase (alpha) subunit;protein_id=AAC73716.1;db_xref=GI:1786832;db_xref=ASAP:ABE-0002119;db_xref=UniProtKB/Swiss-Prot:P75726;db_xref=EcoGene:EG13541 EMBL gene 649582 650490 . - . ID=.1367;gene=citE;locus_tag=b0616;gene_synonym=ECK0609;gene_synonym=JW0608;gene_synonym=ybdW;db_xref=EcoGene:EG13542 EMBL CDS 649582 650490 . - 0 ID=.1368;gene=citE;locus_tag=b0616;gene_synonym=ECK0609;gene_synonym=JW0608;gene_synonym=ybdW;ec_number=4.1.3.34;ec_number=4.1.3.6;function=enzyme%3B Central intermediary metabolism: Pool%2C multipurpose conversions;note=GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=citrate lyase%2C citryl-ACP lyase (beta) subunit;protein_id=AAC73717.2;db_xref=GI:87081764;db_xref=ASAP:ABE-0002122;db_xref=UniProtKB/Swiss-Prot:P0A9I1;db_xref=EcoGene:EG13542 EMBL gene 650487 650783 . - . ID=.1369;gene=citD;locus_tag=b0617;gene_synonym=ECK0610;gene_synonym=JW0609;gene_synonym=ybdX;db_xref=EcoGene:EG13543 EMBL CDS 650487 650783 . - 0 ID=.1370;gene=citD;locus_tag=b0617;gene_synonym=ECK0610;gene_synonym=JW0609;gene_synonym=ybdX;ec_number=4.1.3.6;function=enzyme%3B Central intermediary metabolism: Pool%2C multipurpose conversions;note=citrate lyase acyl carrier protein (gamma chain)%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0042967 - acyl-carrier-protein biosynthetic process;codon_start=1;transl_table=11;product=citrate lyase%2C acyl carrier (gamma) subunit;protein_id=AAC73718.1;db_xref=GI:1786834;db_xref=ASAP:ABE-0002124;db_xref=UniProtKB/Swiss-Prot:P69330;db_xref=EcoGene:EG13543 EMBL gene 650798 651856 . - . ID=.1371;gene=citC;locus_tag=b0618;gene_synonym=ECK0611;gene_synonym=JW0610;gene_synonym=ybeO;db_xref=EcoGene:EG13645 EMBL CDS 650798 651856 . - 0 ID=.1372;gene=citC;locus_tag=b0618;gene_synonym=ECK0611;gene_synonym=JW0610;gene_synonym=ybeO;ec_number=6.2.1.22;function=enzyme%3B Central intermediary metabolism: Pool%2C multipurpose conversions;note=citrate lyase synthetase (citrate (pro-3S)-lyase ligase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=citrate lyase ligase%3B [citrate [pro-3S]-lyase] ligase;protein_id=AAC73719.2;db_xref=GI:87081765;db_xref=ASAP:ABE-0002126;db_xref=UniProtKB/Swiss-Prot:P77390;db_xref=EcoGene:EG13645 EMBL gene 652235 653893 . + . ID=.1373;gene=citA;locus_tag=b0619;gene_synonym=criS;gene_synonym=dpiB;gene_synonym=ECK0612;gene_synonym=JW0611;gene_synonym=mpdB;gene_synonym=ybeP;db_xref=EcoGene:EG13646 EMBL CDS 652235 653893 . + 0 ID=.1374;gene=citA;locus_tag=b0619;gene_synonym=criS;gene_synonym=dpiB;gene_synonym=ECK0612;gene_synonym=JW0611;gene_synonym=mpdB;gene_synonym=ybeP;function=regulator%3B Degradation of small molecules: Carbon compounds;note=putative sensor-type protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=sensory histidine kinase in two-component regulatory system with CitB;protein_id=AAC73720.1;db_xref=GI:1786837;db_xref=ASAP:ABE-0002129;db_xref=UniProtKB/Swiss-Prot:P77510;db_xref=EcoGene:EG13646 EMBL gene 653862 654542 . + . ID=.1375;gene=citB;locus_tag=b0620;gene_synonym=criR;gene_synonym=dpiA;gene_synonym=ECK0613;gene_synonym=JW0612;gene_synonym=mpdA;db_xref=EcoGene:EG13544 EMBL CDS 653862 654542 . + 0 ID=.1376;gene=citB;locus_tag=b0620;gene_synonym=criR;gene_synonym=dpiA;gene_synonym=ECK0613;gene_synonym=JW0612;gene_synonym=mpdA;function=regulator%3B Degradation of small molecules: Carbon compounds;note=sequence similarity to Shigella regulator%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=response regulator in two-component regulatory system with CitA;protein_id=AAC73721.1;db_xref=GI:1786838;db_xref=ASAP:ABE-0002131;db_xref=UniProtKB/Swiss-Prot:P0AEF4;db_xref=EcoGene:EG13544 EMBL repeat_region 654552 654574 . + . ID=.1377;note=REP56 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 654583 655968 . - . ID=.1378;gene=dcuC;locus_tag=b0621;gene_synonym=ECK0614;gene_synonym=JW0613;gene_synonym=JW0616;db_xref=EcoGene:EG13545 EMBL CDS 654583 655968 . - 0 ID=.1379;gene=dcuC;locus_tag=b0621;gene_synonym=ECK0614;gene_synonym=JW0613;gene_synonym=JW0616;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=transport of dicarboxylates%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=anaerobic C4-dicarboxylate transport;protein_id=AAC73722.1;db_xref=GI:1786839;db_xref=ASAP:ABE-0002133;db_xref=UniProtKB/Swiss-Prot:P0ABP3;db_xref=EcoGene:EG13545 EMBL gene 656557 657117 . + . ID=.1380;gene=pagP;locus_tag=b0622;gene_synonym=crcA;gene_synonym=ECK0615;gene_synonym=JW0617;gene_synonym=ybeG;db_xref=EcoGene:EG12180 EMBL CDS 656557 657117 . + 0 ID=.1381;gene=pagP;locus_tag=b0622;gene_synonym=crcA;gene_synonym=ECK0615;gene_synonym=JW0617;gene_synonym=ybeG;ec_number=2.3.1.-;function=enzyme%3B Surface polysaccharides %26 antigens;codon_start=1;transl_table=11;product=phospholipid:lipid A palmitoyltransferase;protein_id=AAC73723.1;db_xref=GI:1786840;db_xref=ASAP:ABE-0002139;db_xref=UniProtKB/Swiss-Prot:P37001;db_xref=EcoGene:EG12180 EMBL gene 657292 657501 . + . ID=.1382;gene=cspE;locus_tag=b0623;gene_synonym=ECK0616;gene_synonym=gicA;gene_synonym=JW0618;gene_synonym=msmC;db_xref=EcoGene:EG12179 EMBL CDS 657292 657501 . + 0 ID=.1383;gene=cspE;locus_tag=b0623;gene_synonym=ECK0616;gene_synonym=gicA;gene_synonym=JW0618;gene_synonym=msmC;function=phenotype%3B Not classified;note=cold shock protein%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0006350 - transcription%3B GO_process: GO:0009266 - response to temperature stimulus;codon_start=1;transl_table=11;product=constitutive cold shock family transcription antitermination protein%3B negative regulator of cspA transcription%3B RNA melting protein%3B ssDNA-binding protein;protein_id=AAC73724.1;db_xref=GI:1786841;db_xref=ASAP:ABE-0002142;db_xref=UniProtKB/Swiss-Prot:P0A972;db_xref=EcoGene:EG12179 EMBL gene 657555 657938 . - . ID=.1384;gene=flc;locus_tag=b0624;gene_synonym=crcB;gene_synonym=ECK0617;gene_synonym=fluC;gene_synonym=JW0619;gene_synonym=ybeI;db_xref=EcoGene:EG12209 EMBL CDS 657555 657938 . - 0 ID=.1385;gene=flc;locus_tag=b0624;gene_synonym=crcB;gene_synonym=ECK0617;gene_synonym=fluC;gene_synonym=JW0619;gene_synonym=ybeI;note=GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=fluoride efflux channel%2C dual topology membrane protein;protein_id=AAC73725.1;db_xref=GI:1786842;db_xref=ASAP:ABE-0002144;db_xref=UniProtKB/Swiss-Prot:P37002;db_xref=EcoGene:EG12209 EMBL gene 658031 658818 . + . ID=.1386;gene=ybeM;locus_tag=b4581;gene_synonym=ECK0618;gene_synonym=JW0620;gene_synonym=ybeH;pseudo=true;db_xref=EcoGene:EG13162 EMBL biological_region 658031 658818 . + 0 ID=.1387;featflags=type:CDS;gene=ybeM;locus_tag=b4581;gene_synonym=ECK0618;gene_synonym=JW0620;gene_synonym=ybeH;note=pseudogene%2C C-N hydrolase superfamily homology%3Bputative enzyme%3B Not classified%3B putative amidase;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0002148;db_xref=ASAP:ABE-0002150;db_xref=ASAP:ABE-0285113;db_xref=UniProtKB/Swiss-Prot:P39874;db_xref=EcoGene:EG13162 EMBL CDS 658031 658225 . + 0 Parent=.1387 EMBL CDS 658225 658818 . + 0 Parent=.1387 EMBL gene 658947 659150 . + . ID=.1390;gene=tatE;locus_tag=b0627;gene_synonym=ECK0620;gene_synonym=JW0622;gene_synonym=ybeC;db_xref=EcoGene:EG11305 EMBL CDS 658947 659150 . + 0 ID=.1391;gene=tatE;locus_tag=b0627;gene_synonym=ECK0620;gene_synonym=JW0622;gene_synonym=ybeC;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=TatABCE protein translocation system subunit;protein_id=AAC73728.1;db_xref=GI:1786845;db_xref=ASAP:ABE-0002153;db_xref=UniProtKB/Swiss-Prot:P0A843;db_xref=EcoGene:EG11305 EMBL gene 659251 660216 . - . ID=.1392;gene=lipA;locus_tag=b0628;gene_synonym=ECK0621;gene_synonym=JW0623;gene_synonym=lip;db_xref=EcoGene:EG11306 EMBL CDS 659251 660216 . - 0 ID=.1393;gene=lipA;locus_tag=b0628;gene_synonym=ECK0621;gene_synonym=JW0623;gene_synonym=lip;ec_number=2.8.1.-;function=putative enzyme%3B Biosynthesis of cofactors%2C carriers: Lipoate;note=lipoate synthesis%2C sulfur insertion?%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009107 - lipoate biosynthetic process;codon_start=1;transl_table=11;product=lipoate synthase;protein_id=AAC73729.1;db_xref=GI:1786846;db_xref=ASAP:ABE-0002155;db_xref=UniProtKB/Swiss-Prot:P60716;db_xref=EcoGene:EG11306 EMBL gene 660425 661378 . - . ID=.1394;gene=ybeF;locus_tag=b0629;gene_synonym=ECK0622;gene_synonym=JW0624;db_xref=EcoGene:EG11594 EMBL CDS 660425 661378 . - 0 ID=.1395;gene=ybeF;locus_tag=b0629;gene_synonym=ECK0622;gene_synonym=JW0624;function=putative regulator%3B Not classified;note=putative transcriptional regulator LYSR-type%3B GO_function: GO:0016563 - transcription activator activity%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=LysR family putative transcriptional regulator;protein_id=AAC73730.2;db_xref=GI:87081766;db_xref=ASAP:ABE-0002158;db_xref=UniProtKB/Swiss-Prot:P30979;db_xref=EcoGene:EG11594 EMBL gene 661637 662278 . - . ID=.1396;gene=lipB;locus_tag=b0630;gene_synonym=cde;gene_synonym=ECK0623;gene_synonym=JW5089;db_xref=EcoGene:EG11591 EMBL CDS 661637 662278 . - 0 ID=.1397;gene=lipB;locus_tag=b0630;gene_synonym=cde;gene_synonym=ECK0623;gene_synonym=JW5089;ec_number=2.3.1.-;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Lipoate;note=protein of lipoate biosynthesis%3B GO_process: GO:0009107 - lipoate biosynthetic process;codon_start=1;transl_table=11;product=octanoyltransferase%3B octanoyl-[ACP]:protein N-octanoyltransferase;protein_id=AAC73731.2;db_xref=GI:87081767;db_xref=ASAP:ABE-0002160;db_xref=UniProtKB/Swiss-Prot:P60720;db_xref=EcoGene:EG11591 EMBL gene 662379 662642 . - . ID=.1398;gene=ybeD;locus_tag=b0631;gene_synonym=ECK0624;gene_synonym=JW0626;db_xref=EcoGene:EG11592 EMBL CDS 662379 662642 . - 0 ID=.1399;gene=ybeD;locus_tag=b0631;gene_synonym=ECK0624;gene_synonym=JW0626;codon_start=1;transl_table=11;product=UPF0250 family protein;protein_id=AAC73732.1;db_xref=GI:1786850;db_xref=ASAP:ABE-0002162;db_xref=UniProtKB/Swiss-Prot:P0A8J4;db_xref=EcoGene:EG11592 EMBL gene 662752 663963 . - . ID=.1400;gene=dacA;locus_tag=b0632;gene_synonym=ECK0625;gene_synonym=JW0627;gene_synonym=pfv;db_xref=EcoGene:EG10201 EMBL CDS 662752 663963 . - 0 ID=.1401;gene=dacA;locus_tag=b0632;gene_synonym=ECK0625;gene_synonym=JW0627;gene_synonym=pfv;ec_number=3.4.16.4;function=enzyme%3B Murein sacculus%2C peptidoglycan;note=D-alanyl-D-alanine carboxypeptidase%2C fraction A%3B penicillin-binding protein 5%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5);protein_id=AAC73733.1;db_xref=GI:1786851;db_xref=ASAP:ABE-0002168;db_xref=UniProtKB/Swiss-Prot:P0AEB2;db_xref=EcoGene:EG10201 EMBL gene 664102 665190 . - . ID=.1402;gene=rlpA;locus_tag=b0633;gene_synonym=ECK0626;gene_synonym=JW0628;db_xref=EcoGene:EG10854 EMBL CDS 664102 665190 . - 0 ID=.1403;gene=rlpA;locus_tag=b0633;gene_synonym=ECK0626;gene_synonym=JW0628;function=membrane%3B Macromolecule synthesis%2C modification: Lipoprotein;note=a minor lipoprotein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=septal ring protein%2C suppressor of prc%2C minor lipoprotein;protein_id=AAC73734.1;db_xref=GI:1786852;db_xref=ASAP:ABE-0002171;db_xref=UniProtKB/Swiss-Prot:P10100;db_xref=EcoGene:EG10854 EMBL gene 665201 666313 . - . ID=.1404;gene=mrdB;locus_tag=b0634;gene_synonym=ECK0627;gene_synonym=JW0629;gene_synonym=rodA;db_xref=EcoGene:EG10607 EMBL CDS 665201 666313 . - 0 ID=.1405;gene=mrdB;locus_tag=b0634;gene_synonym=ECK0627;gene_synonym=JW0629;gene_synonym=rodA;function=phenotype%3B Cell division;note=rod shape-determining membrane protein%3B sensitivity to radiation and drugs%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=cell wall shape-determining protein;protein_id=AAC73735.1;db_xref=GI:1786853;db_xref=ASAP:ABE-0002173;db_xref=UniProtKB/Swiss-Prot:P0ABG7;db_xref=EcoGene:EG10607 EMBL gene 666316 668217 . - . ID=.1406;gene=mrdA;locus_tag=b0635;gene_synonym=ECK0628;gene_synonym=JW0630;gene_synonym=pbpA;db_xref=EcoGene:EG10606 EMBL CDS 666316 668217 . - 0 ID=.1407;gene=mrdA;locus_tag=b0635;gene_synonym=ECK0628;gene_synonym=JW0630;gene_synonym=pbpA;function=enzyme%3B Cell division;experiment=N-terminus verified by Edman degradation: PMID 3533535;note=cell elongation%2C e phase%3B peptidoglycan synthetase%3B penicillin-binding protein 2%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009252 - peptidoglycan biosynthetic process%3B GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=penicillin-binding protein 2%2C transpeptidase involved in peptidoglycan synthesis;protein_id=AAC73736.1;db_xref=GI:1786854;db_xref=ASAP:ABE-0002178;db_xref=UniProtKB/Swiss-Prot:P0AD65;db_xref=EcoGene:EG10606 EMBL gene 668248 668715 . - . ID=.1408;gene=rlmH;locus_tag=b0636;gene_synonym=ECK0629;gene_synonym=JW0631;gene_synonym=ybeA;db_xref=EcoGene:EG11254 EMBL CDS 668248 668715 . - 0 ID=.1409;gene=rlmH;locus_tag=b0636;gene_synonym=ECK0629;gene_synonym=JW0631;gene_synonym=ybeA;function=enzyme%3B rRNA modification;codon_start=1;transl_table=11;product=23S rRNA m(3)Psi1915 pseudouridine methyltransferase%2C SAM-dependent;protein_id=AAC73737.1;db_xref=GI:1786855;db_xref=ASAP:ABE-0002180;db_xref=UniProtKB/Swiss-Prot:P0A8I8;db_xref=EcoGene:EG11254 EMBL gene 668719 669036 . - . ID=.1410;gene=rsfS;locus_tag=b0637;gene_synonym=ECK0630;gene_synonym=JW5090;gene_synonym=rsfA;gene_synonym=slm3;gene_synonym=ybeB;db_xref=EcoGene:EG11255 EMBL CDS 668719 669036 . - 0 ID=.1411;gene=rsfS;locus_tag=b0637;gene_synonym=ECK0630;gene_synonym=JW5090;gene_synonym=rsfA;gene_synonym=slm3;gene_synonym=ybeB;function=factor%3B Ribosomes - maturation and modification;codon_start=1;transl_table=11;product=ribosomal silencing factor;protein_id=AAC73738.2;db_xref=GI:87081768;db_xref=ASAP:ABE-0002183;db_xref=UniProtKB/Swiss-Prot:P0AAT6;db_xref=EcoGene:EG11255 EMBL gene 669296 669907 . - . ID=.1412;gene=cobC;locus_tag=b0638;gene_synonym=ECK0631;gene_synonym=JW0633;gene_synonym=phpB;db_xref=EcoGene:EG13240 EMBL CDS 669296 669907 . - 0 ID=.1413;gene=cobC;locus_tag=b0638;gene_synonym=ECK0631;gene_synonym=JW0633;gene_synonym=phpB;function=putative regulator%3B Biosynthesis of cofactors%2C carriers: Cobalamin;note=homolog of Salmonella cobC%2C a phosphohistidine protein;codon_start=1;transl_table=11;product=putative alpha-ribazole-5'-P phosphatase;protein_id=AAC73739.1;db_xref=GI:1786857;db_xref=ASAP:ABE-0002185;db_xref=UniProtKB/Swiss-Prot:P52086;db_xref=EcoGene:EG13240 EMBL gene 669931 670572 . - . ID=.1414;gene=nadD;locus_tag=b0639;gene_synonym=ECK0632;gene_synonym=fusB;gene_synonym=JW0634;gene_synonym=ybeN;db_xref=EcoGene:EG13241 EMBL CDS 669931 670572 . - 0 ID=.1415;gene=nadD;locus_tag=b0639;gene_synonym=ECK0632;gene_synonym=fusB;gene_synonym=JW0634;gene_synonym=ybeN;ec_number=2.7.7.18;note=GO_process: GO:0009435 - NAD biosynthetic process;codon_start=1;transl_table=11;product=nicotinic acid mononucleotide adenylyltransferase%2C NAD(P)-dependent;protein_id=AAC73740.1;db_xref=GI:1786858;db_xref=ASAP:ABE-0002187;db_xref=UniProtKB/Swiss-Prot:P0A752;db_xref=EcoGene:EG13241 EMBL gene 670574 671605 . - . ID=.1416;gene=holA;locus_tag=b0640;gene_synonym=ECK0633;gene_synonym=JW0635;db_xref=EcoGene:EG11412 EMBL CDS 670574 671605 . - 0 ID=.1417;gene=holA;locus_tag=b0640;gene_synonym=ECK0633;gene_synonym=JW0635;ec_number=2.7.7.7;function=enzyme%3B DNA - replication%2C repair%2C restriction/modification;experiment=N-terminus verified by Edman degradation: PMID 1400251%2C8505303;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006261 - DNA-dependent DNA replication;codon_start=1;transl_table=11;product=DNA polymerase III%2C delta subunit;protein_id=AAC73741.1;db_xref=GI:1786859;db_xref=ASAP:ABE-0002192;db_xref=UniProtKB/Swiss-Prot:P28630;db_xref=EcoGene:EG11412 EMBL gene 671605 672186 . - . ID=.1418;gene=lptE;locus_tag=b0641;gene_synonym=ECK0634;gene_synonym=JW0636;gene_synonym=rlpB;db_xref=EcoGene:EG10855 EMBL CDS 671605 672186 . - 0 ID=.1419;gene=lptE;locus_tag=b0641;gene_synonym=ECK0634;gene_synonym=JW0636;gene_synonym=rlpB;function=membrane%3B Macromolecule synthesis%2C modification: Lipoprotein;note=a minor lipoprotein%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0042158 - lipoprotein biosynthetic process;codon_start=1;transl_table=11;product=LPS assembly OM complex LptDE%2C lipoprotein component;protein_id=AAC73742.1;db_xref=GI:1786860;db_xref=ASAP:ABE-0002194;db_xref=UniProtKB/Swiss-Prot:P0ADC1;db_xref=EcoGene:EG10855 EMBL gene 672201 674783 . - . ID=.1420;gene=leuS;locus_tag=b0642;gene_synonym=ECK0635;gene_synonym=JW0637;db_xref=EcoGene:EG10532 EMBL CDS 672201 674783 . - 0 ID=.1421;gene=leuS;locus_tag=b0642;gene_synonym=ECK0635;gene_synonym=JW0637;ec_number=6.1.1.4;function=enzyme%3B Aminoacyl tRNA synthetases%2C tRNA modification;experiment=N-terminus verified by Edman degradation: PMID 3320963;note=leucine tRNA synthetase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006418 - tRNA aminoacylation for protein translation;codon_start=1;transl_table=11;product=leucyl-tRNA synthetase;protein_id=AAC73743.1;db_xref=GI:1786861;db_xref=ASAP:ABE-0002196;db_xref=UniProtKB/Swiss-Prot:P07813;db_xref=EcoGene:EG10532 EMBL gene 675018 675500 . + . ID=.1422;gene=ybeL;locus_tag=b0643;gene_synonym=ECK0636;gene_synonym=JW0638;db_xref=EcoGene:EG12851 EMBL CDS 675018 675500 . + 0 ID=.1423;gene=ybeL;locus_tag=b0643;gene_synonym=ECK0636;gene_synonym=JW0638;function=phenotype%3B Not classified;note=putative alpha helical protein;codon_start=1;transl_table=11;product=DUF1451 family protein;protein_id=AAC73744.1;db_xref=GI:1786863;db_xref=ASAP:ABE-0002199;db_xref=UniProtKB/Swiss-Prot:P0AAT9;db_xref=EcoGene:EG12851 EMBL gene 675570 676547 . - . ID=.1424;gene=ybeQ;locus_tag=b0644;gene_synonym=ECK0637;gene_synonym=JW5091;db_xref=EcoGene:EG13647 EMBL CDS 675570 676547 . - 0 ID=.1425;gene=ybeQ;locus_tag=b0644;gene_synonym=ECK0637;gene_synonym=JW5091;codon_start=1;transl_table=11;product=Sel1 family TPR-like repeat protein;protein_id=AAC73745.2;db_xref=GI:87081769;db_xref=ASAP:ABE-0002201;db_xref=UniProtKB/Swiss-Prot:P77234;db_xref=EcoGene:EG13647 EMBL gene 676711 677418 . + . ID=.1426;gene=ybeR;locus_tag=b0645;gene_synonym=ECK0638;gene_synonym=JW0640;db_xref=EcoGene:EG13648 EMBL CDS 676711 677418 . + 0 ID=.1427;gene=ybeR;locus_tag=b0645;gene_synonym=ECK0638;gene_synonym=JW0640;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC73746.1;db_xref=GI:1786865;db_xref=ASAP:ABE-0002208;db_xref=UniProtKB/Swiss-Prot:P77627;db_xref=EcoGene:EG13648 EMBL gene 677415 678842 . + . ID=.1428;gene=djlB;locus_tag=b0646;gene_synonym=ECK0639;gene_synonym=JW0641;gene_synonym=ybeS;db_xref=EcoGene:EG13649 EMBL CDS 677415 678842 . + 0 ID=.1429;gene=djlB;locus_tag=b0646;gene_synonym=ECK0639;gene_synonym=JW0641;gene_synonym=ybeS;function=putative factor%3B Chaperones;note=putative enzyme of polynucleotide modification%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=putative HscC co-chaperone%2C uncharacterized J domain-containing protein;protein_id=AAC73747.1;db_xref=GI:1786866;db_xref=ASAP:ABE-0002210;db_xref=UniProtKB/Swiss-Prot:P77381;db_xref=EcoGene:EG13649 EMBL gene 678852 679406 . - . ID=.1430;gene=ybeT;locus_tag=b0647;gene_synonym=ECK0640;gene_synonym=JW0642;db_xref=EcoGene:EG13650 EMBL CDS 678852 679406 . - 0 ID=.1431;gene=ybeT;locus_tag=b0647;gene_synonym=ECK0640;gene_synonym=JW0642;codon_start=1;transl_table=11;product=Sel1 family TPR-like repeat protein;protein_id=AAC73748.1;db_xref=GI:1786867;db_xref=ASAP:ABE-0002213;db_xref=UniProtKB/Swiss-Prot:P77296;db_xref=EcoGene:EG13650 EMBL gene 679508 680215 . + . ID=.1432;gene=ybeU;locus_tag=b0648;gene_synonym=ECK0641;gene_synonym=JW0643;db_xref=EcoGene:EG13651 EMBL CDS 679508 680215 . + 0 ID=.1433;gene=ybeU;locus_tag=b0648;gene_synonym=ECK0641;gene_synonym=JW0643;function=putative enzyme%3B Not classified;note=putative tRNA ligase;codon_start=1;transl_table=11;product=DUF1266 family protein;protein_id=AAC73749.1;db_xref=GI:1786868;db_xref=ASAP:ABE-0002220;db_xref=UniProtKB/Swiss-Prot:P77427;db_xref=EcoGene:EG13651 EMBL gene 680212 681663 . + . ID=.1434;gene=djlC;locus_tag=b0649;gene_synonym=ECK0642;gene_synonym=hscD;gene_synonym=JW0644;gene_synonym=ybeV;db_xref=EcoGene:EG13652 EMBL CDS 680212 681663 . + 0 ID=.1435;gene=djlC;locus_tag=b0649;gene_synonym=ECK0642;gene_synonym=hscD;gene_synonym=JW0644;gene_synonym=ybeV;function=factor%3B Chaperones;codon_start=1;transl_table=11;product=J domain-containing HscC co-chaperone%3B Hsc56;protein_id=AAC73750.1;db_xref=GI:1786869;db_xref=ASAP:ABE-0002222;db_xref=UniProtKB/Swiss-Prot:P77359;db_xref=EcoGene:EG13652 EMBL repeat_region 681685 681714 . + . ID=.1436;note=REP57 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 681723 683393 . - . ID=.1437;gene=hscC;locus_tag=b0650;gene_synonym=ECK0643;gene_synonym=JW0645;gene_synonym=ybeW;db_xref=EcoGene:EG13653 EMBL CDS 681723 683393 . - 0 ID=.1438;gene=hscC;locus_tag=b0650;gene_synonym=ECK0643;gene_synonym=JW0645;gene_synonym=ybeW;function=putative enzyme%3B Not classified;note=GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=Hsp70 family chaperone Hsc62%3B RpoD-binding transcription inhibitor;protein_id=AAC73751.1;db_xref=GI:1786870;db_xref=ASAP:ABE-0002225;db_xref=UniProtKB/Swiss-Prot:P77319;db_xref=EcoGene:EG13653 EMBL gene 683477 684412 . - . ID=.1439;gene=rihA;locus_tag=b0651;gene_synonym=ECK0644;gene_synonym=JW0646;gene_synonym=ybeK;db_xref=EcoGene:EG12701 EMBL CDS 683477 684412 . - 0 ID=.1440;gene=rihA;locus_tag=b0651;gene_synonym=ECK0644;gene_synonym=JW0646;gene_synonym=ybeK;ec_number=3.2.2.-;function=orf%3B Not classified;note=GO_process: GO:0009226 - nucleotide-sugar biosynthetic process;codon_start=1;transl_table=11;product=ribonucleoside hydrolase 1;protein_id=AAC73752.1;db_xref=GI:1786871;db_xref=ASAP:ABE-0002227;db_xref=UniProtKB/Swiss-Prot:P41409;db_xref=EcoGene:EG12701 EMBL gene 684530 685255 . - . ID=.1441;gene=gltL;locus_tag=b0652;gene_synonym=ECK0645;gene_synonym=JW0647;db_xref=EcoGene:EG12663 EMBL CDS 684530 685255 . - 0 ID=.1442;gene=gltL;locus_tag=b0652;gene_synonym=ECK0645;gene_synonym=JW0647;function=transport%3B Transport of small molecules: Amino acids%2C amines;note=ATP-binding protein of glutamate/aspartate transport system%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006537 - glutamate biosynthetic process%3B GO_process: GO:0006532 - aspartate biosynthetic process;codon_start=1;transl_table=11;product=glutamate/aspartate ABC transporter ATPase;protein_id=AAC73753.1;db_xref=GI:1786872;db_xref=ASAP:ABE-0002232;db_xref=UniProtKB/Swiss-Prot:P0AAG3;db_xref=EcoGene:EG12663 EMBL gene 685255 685929 . - . ID=.1443;gene=gltK;locus_tag=b0653;gene_synonym=ECK0646;gene_synonym=JW0648;db_xref=EcoGene:EG12662 EMBL CDS 685255 685929 . - 0 ID=.1444;gene=gltK;locus_tag=b0653;gene_synonym=ECK0646;gene_synonym=JW0648;function=transport%3B Transport of small molecules: Amino acids%2C amines;note=glutamate/aspartate transport system permease%3B membrane component of ABC superfamily%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006537 - glutamate biosynthetic process%3B GO_process: GO:0006532 - aspartate biosynthetic process;codon_start=1;transl_table=11;product=glutamate/aspartate ABC transporter permease;protein_id=AAC73754.1;db_xref=GI:1786873;db_xref=ASAP:ABE-0002234;db_xref=UniProtKB/Swiss-Prot:P0AER5;db_xref=EcoGene:EG12662 EMBL gene 685929 686669 . - . ID=.1445;gene=gltJ;locus_tag=b0654;gene_synonym=ECK0647;gene_synonym=JW0649;db_xref=EcoGene:EG12661 EMBL CDS 685929 686669 . - 0 ID=.1446;gene=gltJ;locus_tag=b0654;gene_synonym=ECK0647;gene_synonym=JW0649;function=transport%3B Transport of small molecules: Amino acids%2C amines;note=glutamate/aspartate transport system permease%3B membrane component of ABC superfamily%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006537 - glutamate biosynthetic process%3B GO_process: GO:0006532 - aspartate biosynthetic process;codon_start=1;transl_table=11;product=glutamate/aspartate ABC transporter permease;protein_id=AAC73755.1;db_xref=GI:1786874;db_xref=ASAP:ABE-0002239;db_xref=UniProtKB/Swiss-Prot:P0AER3;db_xref=EcoGene:EG12661 EMBL repeat_region 686750 686774 . + . ID=.1447;note=REP58 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 686839 687747 . - . ID=.1448;gene=gltI;locus_tag=b0655;gene_synonym=ECK0648;gene_synonym=JW5092;gene_synonym=ybeJ;gene_synonym=yzzK;db_xref=EcoGene:EG12700 EMBL CDS 686839 687747 . - 0 ID=.1449;gene=gltI;locus_tag=b0655;gene_synonym=ECK0648;gene_synonym=JW5092;gene_synonym=ybeJ;gene_synonym=yzzK;function=transport%3B Amino acids;note=periplasmic-binding component of ABC superfamily%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0006537 - glutamate biosynthetic process;codon_start=1;transl_table=11;product=glutamate/aspartate periplasmic binding protein;protein_id=AAC73756.1;db_xref=GI:1786876;db_xref=ASAP:ABE-0002241;db_xref=UniProtKB/Swiss-Prot:P37902;db_xref=EcoGene:EG12700 EMBL sequence_feature 687851 689045 . - . ID=.1450;note=*mobile_element_type: insertion sequence:IS5D EMBL gene 687997 689013 . - . ID=.1451;gene=insH1;locus_tag=b0656;gene_synonym=ECK0261;db_xref=EcoGene:EG40008 EMBL CDS 687997 689013 . - 0 ID=.1452;gene=insH1;locus_tag=b0656;gene_synonym=ECK0261;function=IS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;codon_start=1;transl_table=11;product=IS5 transposase and trans-activator;protein_id=AAC73757.1;db_xref=GI:1786877;db_xref=ASAP:ABE-0002246;db_xref=UniProtKB/Swiss-Prot:P0CE51;db_xref=EcoGene:EG40008 EMBL repeat_region 689264 689297 . + . ID=.1453;note=REP59 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 689343 690881 . - . ID=.1454;gene=lnt;locus_tag=b0657;gene_synonym=cutE;gene_synonym=ECK0649;gene_synonym=JW0654;db_xref=EcoGene:EG10168 EMBL CDS 689343 690881 . - 0 ID=.1455;gene=lnt;locus_tag=b0657;gene_synonym=cutE;gene_synonym=ECK0649;gene_synonym=JW0654;ec_number=2.3.1.-;function=enzyme%3B Transport of small molecules: Cations;note=apolipoprotein N-acyltransferase%2C copper homeostasis protein%2C inner membrane%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0042158 - lipoprotein biosynthetic process;codon_start=1;transl_table=11;product=apolipoprotein N-acyltransferase;protein_id=AAC73758.1;db_xref=GI:1786878;db_xref=ASAP:ABE-0002250;db_xref=UniProtKB/Swiss-Prot:P23930;db_xref=EcoGene:EG10168 EMBL gene 690906 691784 . - . ID=.1456;gene=ybeX;locus_tag=b0658;gene_synonym=corC;gene_synonym=ECK0650;gene_synonym=JW0655;db_xref=EcoGene:EG13654 EMBL CDS 690906 691784 . - 0 ID=.1457;gene=ybeX;locus_tag=b0658;gene_synonym=corC;gene_synonym=ECK0650;gene_synonym=JW0655;function=putative transport%3B Not classified;note=putative transport protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=putative ion transport;protein_id=AAC73759.1;db_xref=GI:1786879;db_xref=ASAP:ABE-0002252;db_xref=UniProtKB/Swiss-Prot:P0AE78;db_xref=EcoGene:EG13654 EMBL gene 691874 692341 . - . ID=.1458;gene=ybeY;locus_tag=b0659;gene_synonym=ECK0651;gene_synonym=JW0656;db_xref=EcoGene:EG13655 EMBL CDS 691874 692341 . - 0 ID=.1459;gene=ybeY;locus_tag=b0659;gene_synonym=ECK0651;gene_synonym=JW0656;codon_start=1;transl_table=11;product=ssRNA-specific endoribonuclease%3B 16S rRNA 3' end maturation and quality control co-endoribonuclease working with RNase R%3B rRNA transcription antitermination factor;protein_id=AAC73760.1;db_xref=GI:1786880;db_xref=ASAP:ABE-0002255;db_xref=UniProtKB/Swiss-Prot:P0A898;db_xref=EcoGene:EG13655 EMBL gene 692338 693378 . - . ID=.1460;gene=ybeZ;locus_tag=b0660;gene_synonym=ECK0652;gene_synonym=JW0657;gene_synonym=phoL;db_xref=EcoGene:EG13656 EMBL CDS 692338 693378 . - 0 ID=.1461;gene=ybeZ;locus_tag=b0660;gene_synonym=ECK0652;gene_synonym=JW0657;gene_synonym=phoL;note=putative ATP-binding protein in pho regulon;codon_start=1;transl_table=11;product=heat shock protein%2C putative NTPase%3B PhoH-like protein;protein_id=AAC73761.2;db_xref=GI:145693103;db_xref=ASAP:ABE-0002257;db_xref=UniProtKB/Swiss-Prot:P0A9K3;db_xref=EcoGene:EG13656 EMBL gene 693531 694955 . - . ID=.1462;gene=miaB;locus_tag=b0661;gene_synonym=ECK0653;gene_synonym=JW0658;gene_synonym=yleA;db_xref=EcoGene:EG13657 EMBL CDS 693531 694955 . - 0 ID=.1463;gene=miaB;locus_tag=b0661;gene_synonym=ECK0653;gene_synonym=JW0658;gene_synonym=yleA;function=enzyme%3B tRNA modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009451 - RNA modification;codon_start=1;transl_table=11;product=tRNA-i(6)A37 methylthiotransferase;protein_id=AAC73762.1;db_xref=GI:1786882;db_xref=ASAP:ABE-0002260;db_xref=UniProtKB/Swiss-Prot:P0AEI1;db_xref=EcoGene:EG13657 EMBL gene 695101 696276 . + . ID=.1464;gene=ubiF;locus_tag=b0662;gene_synonym=ECK0654;gene_synonym=JW0659;gene_synonym=yleB;db_xref=EcoGene:EG13658 EMBL CDS 695101 696276 . + 0 ID=.1465;gene=ubiF;locus_tag=b0662;gene_synonym=ECK0654;gene_synonym=JW0659;gene_synonym=yleB;ec_number=1.14.13.-;codon_start=1;transl_table=11;product=2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol oxygenase;protein_id=AAC73763.1;db_xref=GI:1786883;db_xref=ASAP:ABE-0002265;db_xref=UniProtKB/Swiss-Prot:P75728;db_xref=EcoGene:EG13658 EMBL repeat_region 696307 696377 . + . ID=.1466;note=REP60 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 696430 696504 . - . ID=.1467;gene=glnX;locus_tag=b0664;gene_synonym=ECK0655;gene_synonym=glnVbeta;gene_synonym=JWR0011;gene_synonym=supE;db_xref=EcoGene:EG30031 EMBL tRNA 696430 696504 . - . ID=.1468;gene=glnX;locus_tag=b0664;gene_synonym=ECK0655;gene_synonym=glnVbeta;gene_synonym=JWR0011;gene_synonym=supE;product=tRNA-Gln;note=anticodon: CUG;db_xref=ASAP:ABE-0002272;db_xref=EcoGene:EG30031 EMBL gene 696542 696616 . - . ID=.1469;gene=glnV;locus_tag=b0665;gene_synonym=ECK0656;gene_synonym=glnValpha;gene_synonym=JWR0012;gene_synonym=Su2;gene_synonym=suII;gene_synonym=supE;db_xref=EcoGene:EG30029 EMBL tRNA 696542 696616 . - . ID=.1470;gene=glnV;locus_tag=b0665;gene_synonym=ECK0656;gene_synonym=glnValpha;gene_synonym=JWR0012;gene_synonym=Su2;gene_synonym=suII;gene_synonym=supE;product=tRNA-Gln;note=anticodon: CUG;db_xref=ASAP:ABE-0002274;db_xref=EcoGene:EG30029 EMBL gene 696664 696740 . - . ID=.1471;gene=metU;locus_tag=b0666;gene_synonym=ECK0657;gene_synonym=JWR0013;gene_synonym=metTbeta;db_xref=EcoGene:EG30059 EMBL tRNA 696664 696740 . - . ID=.1472;gene=metU;locus_tag=b0666;gene_synonym=ECK0657;gene_synonym=JWR0013;gene_synonym=metTbeta;product=tRNA-Met;note=anticodon: CAU;db_xref=ASAP:ABE-0002276;db_xref=EcoGene:EG30059 EMBL gene 696756 696830 . - . ID=.1473;gene=glnW;locus_tag=b0668;gene_synonym=ECK0658;gene_synonym=glnUbeta;gene_synonym=JWR0014;db_xref=EcoGene:EG30030 EMBL tRNA 696756 696830 . - . ID=.1474;gene=glnW;locus_tag=b0668;gene_synonym=ECK0658;gene_synonym=glnUbeta;gene_synonym=JWR0014;product=tRNA-Gln;note=anticodon: UUG;db_xref=ASAP:ABE-0002280;db_xref=EcoGene:EG30030 EMBL gene 696865 696939 . - . ID=.1475;gene=glnU;locus_tag=b0670;gene_synonym=ECK0659;gene_synonym=glnUalpha;gene_synonym=JWR0015;gene_synonym=supB;db_xref=EcoGene:EG30028 EMBL tRNA 696865 696939 . - . ID=.1476;gene=glnU;locus_tag=b0670;gene_synonym=ECK0659;gene_synonym=glnUalpha;gene_synonym=JWR0015;gene_synonym=supB;product=tRNA-Gln;note=anticodon: UUG;db_xref=ASAP:ABE-0002284;db_xref=EcoGene:EG30028 EMBL gene 696963 697047 . - . ID=.1477;gene=leuW;locus_tag=b0672;gene_synonym=ECK0660;gene_synonym=feeB;gene_synonym=JWR0016;db_xref=EcoGene:EG30052 EMBL tRNA 696963 697047 . - . ID=.1478;gene=leuW;locus_tag=b0672;gene_synonym=ECK0660;gene_synonym=feeB;gene_synonym=JWR0016;product=tRNA-Leu;note=anticodon: CAA;db_xref=ASAP:ABE-0002288;db_xref=EcoGene:EG30052 EMBL gene 697057 697133 . - . ID=.1479;gene=metT;locus_tag=b0673;gene_synonym=ECK0661;gene_synonym=JWR0017;gene_synonym=metTalpha;db_xref=EcoGene:EG30058 EMBL tRNA 697057 697133 . - . ID=.1480;gene=metT;locus_tag=b0673;gene_synonym=ECK0661;gene_synonym=JWR0017;gene_synonym=metTalpha;product=tRNA-Met;note=anticodon: CAU;db_xref=ASAP:ABE-0002290;db_xref=EcoGene:EG30058 EMBL gene 697513 699177 . - . ID=.1481;gene=asnB;locus_tag=b0674;gene_synonym=ECK0662;gene_synonym=JW0660;db_xref=EcoGene:EG10092 EMBL CDS 697513 699177 . - 0 ID=.1482;gene=asnB;locus_tag=b0674;gene_synonym=ECK0662;gene_synonym=JW0660;ec_number=6.3.5.4;function=enzyme%3B Amino acid biosynthesis: Asparagine;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009063 - cellular amino acid catabolic process%3B GO_process: GO:0006529 - asparagine biosynthetic process;codon_start=1;transl_table=11;product=asparagine synthetase B;protein_id=AAC73768.1;db_xref=GI:1786889;db_xref=ASAP:ABE-0002292;db_xref=UniProtKB/Swiss-Prot:P22106;db_xref=EcoGene:EG10092 EMBL repeat_region 699425 699522 . + . ID=.1483;note=RIP61 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 699574 700326 . - . ID=.1484;gene=umpH;locus_tag=b0675;gene_synonym=ECK0663;gene_synonym=JW0661;gene_synonym=nagD;db_xref=EcoGene:EG10634 EMBL CDS 699574 700326 . - 0 ID=.1485;gene=umpH;locus_tag=b0675;gene_synonym=ECK0663;gene_synonym=JW0661;gene_synonym=nagD;function=enzyme%3B Central intermediary metabolism: Amino sugars;note=N-acetylglucosamine metabolism%3B GO_process: GO:0046349 - amino sugar biosynthetic process;codon_start=1;transl_table=11;product=UMP phosphatase;protein_id=AAC73769.1;db_xref=GI:1786890;db_xref=ASAP:ABE-0002296;db_xref=UniProtKB/Swiss-Prot:P0AF24;db_xref=EcoGene:EG10634 EMBL gene 700374 701594 . - . ID=.1486;gene=nagC;locus_tag=b0676;gene_synonym=ECK0664;gene_synonym=JW0662;gene_synonym=nagR;db_xref=EcoGene:EG10636 EMBL CDS 700374 701594 . - 0 ID=.1487;gene=nagC;locus_tag=b0676;gene_synonym=ECK0664;gene_synonym=JW0662;gene_synonym=nagR;function=regulator%3B Central intermediary metabolism: Amino sugars;note=transcriptional repressor of nag (N-acetylglucosamine) operon%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0046349 - amino sugar biosynthetic process%3B GO_process: GO:0006350 - transcription%3B GO_process: GO:0009386 - translational attenuation;codon_start=1;transl_table=11;product=N-acetylglucosamine-inducible nag divergent operon transcriptional repressor;protein_id=AAC73770.1;db_xref=GI:1786891;db_xref=ASAP:ABE-0002299;db_xref=UniProtKB/Swiss-Prot:P0AF20;db_xref=EcoGene:EG10636 EMBL gene 701603 702751 . - . ID=.1488;gene=nagA;locus_tag=b0677;gene_synonym=ECK0665;gene_synonym=JW0663;db_xref=EcoGene:EG10632 EMBL CDS 701603 702751 . - 0 ID=.1489;gene=nagA;locus_tag=b0677;gene_synonym=ECK0665;gene_synonym=JW0663;ec_number=3.5.1.25;function=enzyme%3B Central intermediary metabolism: Amino sugars;note=GO_process: GO:0046349 - amino sugar biosynthetic process;codon_start=1;transl_table=11;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=AAC73771.1;db_xref=GI:1786892;db_xref=ASAP:ABE-0002301;db_xref=UniProtKB/Swiss-Prot:P0AF18;db_xref=EcoGene:EG10632 EMBL gene 702811 703611 . - . ID=.1490;gene=nagB;locus_tag=b0678;gene_synonym=ECK0666;gene_synonym=glmD;gene_synonym=JW0664;db_xref=EcoGene:EG10633 EMBL CDS 702811 703611 . - 0 ID=.1491;gene=nagB;locus_tag=b0678;gene_synonym=ECK0666;gene_synonym=glmD;gene_synonym=JW0664;ec_number=3.5.99.6;function=enzyme%3B Central intermediary metabolism: Amino sugars;note=GO_process: GO:0046349 - amino sugar biosynthetic process;codon_start=1;transl_table=11;product=glucosamine-6-phosphate deaminase;protein_id=AAC73772.1;db_xref=GI:1786893;db_xref=ASAP:ABE-0002304;db_xref=UniProtKB/Swiss-Prot:P0A759;db_xref=EcoGene:EG10633 EMBL gene 703944 705890 . + . ID=.1492;gene=nagE;locus_tag=b0679;gene_synonym=ECK0667;gene_synonym=JW0665;gene_synonym=pstN;gene_synonym=ptsN;db_xref=EcoGene:EG10635 EMBL CDS 703944 705890 . + 0 ID=.1493;gene=nagE;locus_tag=b0679;gene_synonym=ECK0667;gene_synonym=JW0665;gene_synonym=pstN;gene_synonym=ptsN;ec_number=2.7.1.69;function=enzyme%3B Transport of small molecules: Amino acids%2C amines;note=PTS system%2C N-acetylglucosamine-specific enzyme IIABC%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009310 - amine catabolic process%3B GO_process: GO:0046349 - amino sugar biosynthetic process;codon_start=1;transl_table=11;product=N-acetyl glucosamine specific PTS enzyme IIC%2C IIB%2C and IIA components;protein_id=AAC73773.1;db_xref=GI:1786894;db_xref=ASAP:ABE-0002312;db_xref=UniProtKB/Swiss-Prot:P09323;db_xref=EcoGene:EG10635 EMBL repeat_region 705897 705932 . + . ID=.1494;note=REP62 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 706093 707757 . + . ID=.1495;gene=glnS;locus_tag=b0680;gene_synonym=ECK0668;gene_synonym=JW0666;db_xref=EcoGene:EG10390 EMBL CDS 706093 707757 . + 0 ID=.1496;gene=glnS;locus_tag=b0680;gene_synonym=ECK0668;gene_synonym=JW0666;ec_number=6.1.1.18;function=enzyme%3B Aminoacyl tRNA synthetases%2C tRNA modification;note=glutamine tRNA synthetase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006418 - tRNA aminoacylation for protein translation;codon_start=1;transl_table=11;product=glutamyl-tRNA synthetase;protein_id=AAC73774.1;db_xref=GI:1786895;db_xref=ASAP:ABE-0002317;db_xref=UniProtKB/Swiss-Prot:P00962;db_xref=EcoGene:EG10390 EMBL repeat_region 707770 707934 . + . ID=.1497;note=RIP63 (repetitive extragenic palindromic) element%3B contains 3 REP sequences and 1 IHF site EMBL gene 708334 709740 . + . ID=.1498;gene=chiP;locus_tag=b0681;gene_synonym=ECK0669;gene_synonym=JW0667;gene_synonym=ybfM;db_xref=EcoGene:EG13659 EMBL CDS 708334 709740 . + 0 ID=.1499;gene=chiP;locus_tag=b0681;gene_synonym=ECK0669;gene_synonym=JW0667;gene_synonym=ybfM;codon_start=1;transl_table=11;product=chitoporin%2C uptake of chitosugars;protein_id=AAC73775.1;db_xref=GI:1786897;db_xref=ASAP:ABE-0002323;db_xref=UniProtKB/Swiss-Prot:P75733;db_xref=EcoGene:EG13659 EMBL gene 709790 710116 . + . ID=.1500;gene=chiQ;locus_tag=b0682;gene_synonym=ECK0670;gene_synonym=JW0668;gene_synonym=ybfN;db_xref=EcoGene:EG13660 EMBL CDS 709790 710116 . + 0 ID=.1501;gene=chiQ;locus_tag=b0682;gene_synonym=ECK0670;gene_synonym=JW0668;gene_synonym=ybfN;codon_start=1;transl_table=11;product=chitosugar-induced verified lipoprotein;protein_id=AAC73776.1;db_xref=GI:1786898;db_xref=ASAP:ABE-0002325;db_xref=UniProtKB/Swiss-Prot:P75734;db_xref=EcoGene:EG13660 EMBL gene 710200 710646 . - . ID=.1502;gene=fur;locus_tag=b0683;gene_synonym=ECK0671;gene_synonym=JW0669;db_xref=EcoGene:EG10359 EMBL CDS 710200 710646 . - 0 ID=.1503;gene=fur;locus_tag=b0683;gene_synonym=ECK0671;gene_synonym=JW0669;function=regulator%3B Global regulatory functions;note=negative regulator%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=ferric iron uptake regulon transcriptional repressor%3B autorepressor;protein_id=AAC73777.1;db_xref=GI:1786899;db_xref=ASAP:ABE-0002327;db_xref=UniProtKB/Swiss-Prot:P0A9A9;db_xref=EcoGene:EG10359 EMBL gene 710639 710725 . - . ID=.1504;gene=uof;locus_tag=b4637;gene_synonym=ECK4461;db_xref=EcoGene:EG14465 EMBL CDS 710639 710725 . - 0 ID=.1505;gene=uof;locus_tag=b4637;gene_synonym=ECK4461;codon_start=1;transl_table=11;product=ryhB-regulated fur leader peptide;protein_id=ABV59574.1;db_xref=GI:157672246;db_xref=UniProtKB/Swiss-Prot:A8DYP9;db_xref=EcoGene:EG14465 EMBL repeat_region 710908 710940 . + . ID=.1506;note=REP64 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 710935 711465 . - . ID=.1507;gene=fldA;locus_tag=b0684;gene_synonym=ECK0672;gene_synonym=JW0671;db_xref=EcoGene:EG10318 EMBL CDS 710935 711465 . - 0 ID=.1508;gene=fldA;locus_tag=b0684;gene_synonym=ECK0672;gene_synonym=JW0671;function=enzyme%3B Energy metabolism%2C carbon: Electron transport;codon_start=1;transl_table=11;product=flavodoxin 1;protein_id=AAC73778.1;db_xref=GI:1786900;db_xref=ASAP:ABE-0002332;db_xref=UniProtKB/Swiss-Prot:P61949;db_xref=EcoGene:EG10318 EMBL gene 711605 711898 . - . ID=.1509;gene=ybfE;locus_tag=b0685;gene_synonym=ECK0673;gene_synonym=JW5816;db_xref=EcoGene:EG11775 EMBL CDS 711605 711898 . - 0 ID=.1510;gene=ybfE;locus_tag=b0685;gene_synonym=ECK0673;gene_synonym=JW5816;note=GO_process: GO:0009432 - SOS response;codon_start=1;transl_table=11;product=LexA-regulated protein%2C CopB family;protein_id=AAC73779.2;db_xref=GI:87081770;db_xref=ASAP:ABE-0002335;db_xref=UniProtKB/Swiss-Prot:P0AAU7;db_xref=EcoGene:EG11775 EMBL gene 712038 712802 . - . ID=.1511;gene=ybfF;locus_tag=b0686;gene_synonym=ECK0674;gene_synonym=JW0673;db_xref=EcoGene:EG11776 EMBL CDS 712038 712802 . - 0 ID=.1512;gene=ybfF;locus_tag=b0686;gene_synonym=ECK0674;gene_synonym=JW0673;codon_start=1;transl_table=11;product=acyl-CoA esterase;protein_id=AAC73780.1;db_xref=GI:1786902;db_xref=ASAP:ABE-0002337;db_xref=UniProtKB/Swiss-Prot:P75736;db_xref=EcoGene:EG11776 EMBL gene 712987 713532 . + . ID=.1513;gene=seqA;locus_tag=b0687;gene_synonym=ECK0675;gene_synonym=hsm-1;gene_synonym=JW0674;db_xref=EcoGene:EG12197 EMBL CDS 712987 713532 . + 0 ID=.1514;gene=seqA;locus_tag=b0687;gene_synonym=ECK0675;gene_synonym=hsm-1;gene_synonym=JW0674;function=regulator%3B DNA - replication%2C repair%2C restriction/modification;experiment=N-terminus verified by Edman degradation: PMID 7553853;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006261 - DNA-dependent DNA replication;codon_start=1;transl_table=11;product=negative modulator of initiation of replication;protein_id=AAC73781.1;db_xref=GI:1786903;db_xref=ASAP:ABE-0002343;db_xref=UniProtKB/Swiss-Prot:P0AFY8;db_xref=EcoGene:EG12197 EMBL gene 713558 715198 . + . ID=.1515;gene=pgm;locus_tag=b0688;gene_synonym=blu;gene_synonym=ECK0676;gene_synonym=JW0675;gene_synonym=pgmA;db_xref=EcoGene:EG12144 EMBL CDS 713558 715198 . + 0 ID=.1516;gene=pgm;locus_tag=b0688;gene_synonym=blu;gene_synonym=ECK0676;gene_synonym=JW0675;gene_synonym=pgmA;ec_number=5.4.2.2;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0006006 - glucose metabolic process;codon_start=1;transl_table=11;product=phosphoglucomutase;protein_id=AAC73782.1;db_xref=GI:1786904;db_xref=ASAP:ABE-0002345;db_xref=UniProtKB/Swiss-Prot:P36938;db_xref=EcoGene:EG12144 EMBL repeat_region 715264 715361 . + . ID=.1517;note=RIP65 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 715412 715906 . + . ID=.1518;gene=ybfP;locus_tag=b0689;gene_synonym=ECK0677;gene_synonym=JW0676;db_xref=EcoGene:EG14158 EMBL CDS 715412 715906 . + 0 ID=.1519;gene=ybfP;locus_tag=b0689;gene_synonym=ECK0677;gene_synonym=JW0676;function=putative enzyme%3B Not classified;note=putative pectinase;codon_start=1;transl_table=11;product=lipoprotein;protein_id=AAC73783.1;db_xref=GI:1786905;db_xref=ASAP:ABE-0002350;db_xref=UniProtKB/Swiss-Prot:P75737;db_xref=EcoGene:EG14158 EMBL gene 715947 716597 . - . ID=.1520;gene=ybfG;locus_tag=b0691;gene_synonym=ECK0678;gene_synonym=JW5094;gene_synonym=ybfH;pseudo=true;db_xref=EcoGene:EG11777 EMBL CDS 715947 716597 . - 0 ID=.1521;gene=ybfG;locus_tag=b0691;gene_synonym=ECK0678;gene_synonym=JW5094;gene_synonym=ybfH;note=pseudogene;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0002352;db_xref=ASAP:ABE-0002355;db_xref=UniProtKB/Swiss-Prot:P37003;db_xref=EcoGene:EG11777 EMBL gene 716721 716870 . - . ID=.1522;gene=ybfI;locus_tag=b4636;gene_synonym=ECK4436;pseudo=true;db_xref=EcoGene:EG12390 EMBL CDS 716721 716870 . - 0 ID=.1523;gene=ybfI;locus_tag=b4636;gene_synonym=ECK4436;note=pseudogene;pseudo=true;codon_start=1;transl_table=11;db_xref=UniProtKB/Swiss-Prot:P39901;db_xref=EcoGene:EG12390 EMBL gene 716946 718265 . - . ID=.1524;gene=potE;locus_tag=b0692;gene_synonym=ECK0680;gene_synonym=JW0679;db_xref=EcoGene:EG10753 EMBL CDS 716946 718265 . - 0 ID=.1525;gene=potE;locus_tag=b0692;gene_synonym=ECK0680;gene_synonym=JW0679;function=transport%3B Transport of small molecules: Amino acids%2C amines;note=putrescine transport protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_function: GO:0015496 - putrescine:ornithine antiporter activity%3B GO_process: GO:0009310 - amine catabolic process%3B GO_process: GO:0006596 - polyamine biosynthetic process%3B GO_process: GO:0006970 - response to osmotic stress;codon_start=1;transl_table=11;product=putrescine/proton symporter: putrescine/ornithine antiporter;protein_id=AAC73786.1;db_xref=GI:1786908;db_xref=ASAP:ABE-0002360;db_xref=UniProtKB/Swiss-Prot:P0AAF1;db_xref=EcoGene:EG10753 EMBL gene 718262 720460 . - . ID=.1526;gene=speF;locus_tag=b0693;gene_synonym=ECK0681;gene_synonym=JW0680;db_xref=EcoGene:EG10964 EMBL CDS 718262 720460 . - 0 ID=.1527;gene=speF;locus_tag=b0693;gene_synonym=ECK0681;gene_synonym=JW0680;ec_number=4.1.1.17;function=enzyme%3B Central intermediary metabolism: Polyamine biosynthesis;note=GO_process: GO:0006596 - polyamine biosynthetic process;codon_start=1;transl_table=11;product=ornithine decarboxylase isozyme%2C inducible;protein_id=AAC73787.1;db_xref=GI:1786909;db_xref=ASAP:ABE-0002362;db_xref=UniProtKB/Swiss-Prot:P24169;db_xref=EcoGene:EG10964 EMBL gene 720583 720840 . + . ID=.1528;gene=ybfK;locus_tag=b4590;gene_synonym=ECK4400;db_xref=EcoGene:EG12869 EMBL CDS 720583 720840 . + 0 ID=.1529;gene=ybfK;locus_tag=b4590;gene_synonym=ECK4400;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=ABP93437.1;db_xref=GI:145693104;db_xref=UniProtKB/Swiss-Prot:P46121;db_xref=EcoGene:EG12869 EMBL gene 721056 721733 . - . ID=.1530;gene=kdpE;locus_tag=b0694;gene_synonym=ECK0682;gene_synonym=JW5096;db_xref=EcoGene:EG10517 EMBL CDS 721056 721733 . - 0 ID=.1531;gene=kdpE;locus_tag=b0694;gene_synonym=ECK0682;gene_synonym=JW5096;function=regulator%3B Global regulatory functions;experiment=N-terminus verified by Edman degradation: PMID 1630317;note=regulator of kdp operon (transcriptional effector)%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=response regulator in two-component regulatory system with KdpD;protein_id=AAC73788.1;db_xref=GI:1786911;db_xref=ASAP:ABE-0002366;db_xref=UniProtKB/Swiss-Prot:P21866;db_xref=EcoGene:EG10517 EMBL gene 721730 724414 . - . ID=.1532;gene=kdpD;locus_tag=b0695;gene_synonym=ECK0683;gene_synonym=JW0683;gene_synonym=kac;db_xref=EcoGene:EG10516 EMBL CDS 721730 724414 . - 0 ID=.1533;gene=kdpD;locus_tag=b0695;gene_synonym=ECK0683;gene_synonym=JW0683;gene_synonym=kac;function=enzyme%3B Global regulatory functions;note=sensor for high-affinity potassium transport system%3B sensory histidine kinase%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=fused sensory histidine kinase in two-component regulatory system with KdpE: signal sensing protein;protein_id=AAC73789.1;db_xref=GI:1786912;db_xref=ASAP:ABE-0002368;db_xref=UniProtKB/Swiss-Prot:P21865;db_xref=EcoGene:EG10516 EMBL gene 724407 724979 . - . ID=.1534;gene=kdpC;locus_tag=b0696;gene_synonym=ECK0684;gene_synonym=JW0684;gene_synonym=kac;db_xref=EcoGene:EG10515 EMBL CDS 724407 724979 . - 0 ID=.1535;gene=kdpC;locus_tag=b0696;gene_synonym=ECK0684;gene_synonym=JW0684;gene_synonym=kac;ec_number=3.6.3.12;function=enzyme%3B Transport of small molecules: Cations;note=high-affinity potassium transport system%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_function: GO:0015662 - ATPase activity%2C coupled to transmembrane movement of ions%2C phosphorylative mechanism;codon_start=1;transl_table=11;product=potassium translocating ATPase%2C subunit C;protein_id=AAC73790.1;db_xref=GI:1786913;db_xref=ASAP:ABE-0002374;db_xref=UniProtKB/Swiss-Prot:P03961;db_xref=EcoGene:EG10515 EMBL gene 724988 727036 . - . ID=.1536;gene=kdpB;locus_tag=b0697;gene_synonym=ECK0685;gene_synonym=JW0685;gene_synonym=kac;db_xref=EcoGene:EG10514 EMBL CDS 724988 727036 . - 0 ID=.1537;gene=kdpB;locus_tag=b0697;gene_synonym=ECK0685;gene_synonym=JW0685;gene_synonym=kac;ec_number=3.6.3.12;function=enzyme%3B Transport of small molecules: Cations;note=ATPase of high-affinity potassium transport system%2C B chain%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_function: GO:0015662 - ATPase activity%2C coupled to transmembrane movement of ions%2C phosphorylative mechanism;codon_start=1;transl_table=11;product=potassium translocating ATPase%2C subunit B;protein_id=AAC73791.1;db_xref=GI:1786914;db_xref=ASAP:ABE-0002376;db_xref=UniProtKB/Swiss-Prot:P03960;db_xref=EcoGene:EG10514 EMBL gene 727059 728732 . - . ID=.1538;gene=kdpA;locus_tag=b0698;gene_synonym=ECK0686;gene_synonym=JW0686;gene_synonym=kac;db_xref=EcoGene:EG10513 EMBL CDS 727059 728732 . - 0 ID=.1539;gene=kdpA;locus_tag=b0698;gene_synonym=ECK0686;gene_synonym=JW0686;gene_synonym=kac;ec_number=3.6.3.12;function=enzyme%3B Transport of small molecules: Cations;note=ATPase of high-affinity potassium transport system%2C A chain%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_function: GO:0015662 - ATPase activity%2C coupled to transmembrane movement of ions%2C phosphorylative mechanism;codon_start=1;transl_table=11;product=potassium translocating ATPase%2C subunit A;protein_id=AAC73792.1;db_xref=GI:1786915;db_xref=ASAP:ABE-0002381;db_xref=UniProtKB/Swiss-Prot:P03959;db_xref=EcoGene:EG10513 EMBL gene 728732 728821 . - . ID=.1540;gene=kdpF;locus_tag=b4513;gene_synonym=ECK0687;gene_synonym=JW0687;db_xref=EcoGene:EG12126 EMBL CDS 728732 728821 . - 0 ID=.1541;gene=kdpF;locus_tag=b4513;gene_synonym=ECK0687;gene_synonym=JW0687;note=GO_component: GO:0031225 - anchored to membrane;codon_start=1;transl_table=11;product=potassium ion accessory transporter subunit;protein_id=ABD18643.1;db_xref=GI:87081773;db_xref=ASAP:ABE-0285034;db_xref=UniProtKB/Swiss-Prot:P36937;db_xref=EcoGene:EG12126 EMBL gene 729134 729340 . + . ID=.1542;gene=ybfA;locus_tag=b0699;gene_synonym=ECK0688;gene_synonym=JW0688;db_xref=EcoGene:EG11521 EMBL CDS 729134 729340 . + 0 ID=.1543;gene=ybfA;locus_tag=b0699;gene_synonym=ECK0688;gene_synonym=JW0688;codon_start=1;transl_table=11;product=DUF2517 family protein;protein_id=AAC73793.1;db_xref=GI:1786916;db_xref=ASAP:ABE-0002386;db_xref=UniProtKB/Swiss-Prot:P0AAU2;db_xref=EcoGene:EG11521 EMBL gene 729583 733776 . + . ID=.1544;gene=rhsC;locus_tag=b0700;gene_synonym=ECK0689;gene_synonym=JW0689;db_xref=EcoGene:EG10848 EMBL CDS 729583 733776 . + 0 ID=.1545;gene=rhsC;locus_tag=b0700;gene_synonym=ECK0689;gene_synonym=JW0689;codon_start=1;transl_table=11;product=Rhs protein with putative toxin domain%3B putative neighboring cell growth inhibitor;protein_id=AAC73794.1;db_xref=GI:1786917;db_xref=ASAP:ABE-0002392;db_xref=UniProtKB/Swiss-Prot:P16918;db_xref=EcoGene:EG10848 EMBL gene 733776 734102 . + . ID=.1546;gene=ybfB;locus_tag=b0702;gene_synonym=ECK0690;gene_synonym=JW0691;db_xref=EcoGene:EG11522 EMBL CDS 733776 734102 . + 0 ID=.1547;gene=ybfB;locus_tag=b0702;gene_synonym=ECK0690;gene_synonym=JW0691;codon_start=1;transl_table=11;product=putative membrane protein;protein_id=AAC73796.1;db_xref=GI:1786919;db_xref=ASAP:ABE-0002398;db_xref=UniProtKB/Swiss-Prot:P0AAU5;db_xref=EcoGene:EG11522 EMBL gene 734133 735653 . + . ID=.1548;gene=rhsO;locus_tag=b0703;gene_synonym=ECK0691;gene_synonym=JW0692;gene_synonym=ybfO;pseudo=true;db_xref=EcoGene:EG13661 EMBL CDS 734133 735653 . + 0 ID=.1549;gene=rhsO;locus_tag=b0703;gene_synonym=ECK0691;gene_synonym=JW0692;gene_synonym=ybfO;note=pseudogene%2C Rhs family;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0002402;db_xref=UniProtKB/Swiss-Prot:P77779;db_xref=EcoGene:EG13661 EMBL gene 735650 736219 . + . ID=.1550;gene=ybfC;locus_tag=b0704;gene_synonym=ECK0692;gene_synonym=JW0693;db_xref=EcoGene:EG11523 EMBL CDS 735650 736219 . + 0 ID=.1551;gene=ybfC;locus_tag=b0704;gene_synonym=ECK0692;gene_synonym=JW0693;codon_start=1;transl_table=11;product=putative secreted protein;protein_id=AAC73798.1;db_xref=GI:1786922;db_xref=ASAP:ABE-0002404;db_xref=UniProtKB/Swiss-Prot:P28915;db_xref=EcoGene:EG11523 EMBL gene 736445 736684 . + . ID=.1552;gene=ybfQ;locus_tag=b4514;gene_synonym=ECK4474;pseudo=true;db_xref=EcoGene:EG14419 EMBL CDS 736445 736684 . + 0 ID=.1553;gene=ybfQ;locus_tag=b4514;gene_synonym=ECK4474;note=pseudogene%2C H repeat-associated protein;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0285035;db_xref=UniProtKB/Swiss-Prot:Q2EEQ8;db_xref=EcoGene:EG14419 EMBL gene 736825 737961 . + . ID=.1554;gene=ybfL;locus_tag=b0705;gene_synonym=ECK0694;gene_synonym=JW0695;pseudo=true;db_xref=EcoGene:EG13417 EMBL CDS 736825 737961 . + 0 ID=.1555;gene=ybfL;locus_tag=b0705;gene_synonym=ECK0694;gene_synonym=JW0695;note=pseudogene%2C DDE domain transposase family%3Bputative factor%3B Not classified%3B putative receptor protein;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0002407;db_xref=UniProtKB/Swiss-Prot:P75741;db_xref=EcoGene:EG13417 EMBL gene 738092 738853 . + . ID=.1556;gene=ybfD;locus_tag=b0706;gene_synonym=ECK0695;gene_synonym=JW0696;db_xref=EcoGene:EG11524 EMBL CDS 738092 738853 . + 0 ID=.1557;gene=ybfD;locus_tag=b0706;gene_synonym=ECK0695;gene_synonym=JW0696;function=putative enzyme%3B Not classified;note=putative DNA ligase;codon_start=1;transl_table=11;product=H repeat-associated putative transposase;protein_id=AAC73800.1;db_xref=GI:1786924;db_xref=ASAP:ABE-0002411;db_xref=UniProtKB/Swiss-Prot:P28916;db_xref=EcoGene:EG11524 EMBL gene 739001 739510 . + . ID=.1558;gene=ybgA;locus_tag=b0707;gene_synonym=ECK0696;gene_synonym=JW0697;gene_synonym=tkp;db_xref=EcoGene:EG11108 EMBL CDS 739001 739510 . + 0 ID=.1559;gene=ybgA;locus_tag=b0707;gene_synonym=ECK0696;gene_synonym=JW0697;gene_synonym=tkp;codon_start=1;transl_table=11;product=DUF1722 family protein;protein_id=AAC73801.1;db_xref=GI:1786925;db_xref=ASAP:ABE-0002414;db_xref=UniProtKB/Swiss-Prot:P24252;db_xref=EcoGene:EG11108 EMBL gene 739507 740925 . + . ID=.1560;gene=phr;locus_tag=b0708;gene_synonym=ECK0697;gene_synonym=JW0698;gene_synonym=phrB;db_xref=EcoGene:EG10736 EMBL CDS 739507 740925 . + 0 ID=.1561;gene=phr;locus_tag=b0708;gene_synonym=ECK0697;gene_synonym=JW0698;gene_synonym=phrB;ec_number=4.1.99.3;function=enzyme%3B DNA - replication%2C repair%2C restriction/modification;note=deoxyribodipyrimidine photolyase (photoreactivation)%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006281 - DNA repair;codon_start=1;transl_table=11;product=deoxyribodipyrimidine photolyase%2C FAD-binding;protein_id=AAC73802.1;db_xref=GI:1786926;db_xref=ASAP:ABE-0002417;db_xref=UniProtKB/Swiss-Prot:P00914;db_xref=EcoGene:EG10736 EMBL repeat_region 740954 741059 . + . ID=.1562;note=RIP66 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 741075 742556 . - . ID=.1563;gene=dtpD;locus_tag=b0709;gene_synonym=ECK0698;gene_synonym=JW0699;gene_synonym=ybgH;db_xref=EcoGene:EG13304 EMBL CDS 741075 742556 . - 0 ID=.1564;gene=dtpD;locus_tag=b0709;gene_synonym=ECK0698;gene_synonym=JW0699;gene_synonym=ybgH;function=transport%3B Not classified;note=putative transport protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009063 - cellular amino acid catabolic process;codon_start=1;transl_table=11;product=dipeptide and tripeptide permease D;protein_id=AAC73803.1;db_xref=GI:1786927;db_xref=ASAP:ABE-0002420;db_xref=UniProtKB/Swiss-Prot:P75742;db_xref=EcoGene:EG13304 EMBL gene 742827 743570 . + . ID=.1565;gene=ybgI;locus_tag=b0710;gene_synonym=ECK0699;gene_synonym=JW0700;db_xref=EcoGene:EG13305 EMBL CDS 742827 743570 . + 0 ID=.1566;gene=ybgI;locus_tag=b0710;gene_synonym=ECK0699;gene_synonym=JW0700;codon_start=1;transl_table=11;product=NIF3 family metal-binding protein;protein_id=AAC73804.1;db_xref=GI:1786928;db_xref=ASAP:ABE-0002424;db_xref=UniProtKB/Swiss-Prot:P0AFP6;db_xref=EcoGene:EG13305 EMBL gene 743593 744249 . + . ID=.1567;gene=ybgJ;locus_tag=b0711;gene_synonym=ECK0700;gene_synonym=JW0701;db_xref=EcoGene:EG13306 EMBL CDS 743593 744249 . + 0 ID=.1568;gene=ybgJ;locus_tag=b0711;gene_synonym=ECK0700;gene_synonym=JW0701;function=putative enzyme%3B Not classified;note=putative carboxylase;codon_start=1;transl_table=11;product=putative allophanate hydrolase%2C subunit 1;protein_id=AAC73805.1;db_xref=GI:1786929;db_xref=ASAP:ABE-0002426;db_xref=UniProtKB/Swiss-Prot:P0AAV4;db_xref=EcoGene:EG13306 EMBL gene 744243 745175 . + . ID=.1569;gene=ybgK;locus_tag=b0712;gene_synonym=ECK0701;gene_synonym=JW0702;db_xref=EcoGene:EG13307 EMBL CDS 744243 745175 . + 0 ID=.1570;gene=ybgK;locus_tag=b0712;gene_synonym=ECK0701;gene_synonym=JW0702;function=putative enzyme%3B Not classified;note=putative carboxylase;codon_start=1;transl_table=11;product=putative allophanate hydrolase%2C subunit 2;protein_id=AAC73806.1;db_xref=GI:1786930;db_xref=ASAP:ABE-0002428;db_xref=UniProtKB/Swiss-Prot:P75745;db_xref=EcoGene:EG13307 EMBL gene 745165 745899 . + . ID=.1571;gene=ybgL;locus_tag=b0713;gene_synonym=ECK0702;gene_synonym=JW0703;db_xref=EcoGene:EG13308 EMBL CDS 745165 745899 . + 0 ID=.1572;gene=ybgL;locus_tag=b0713;gene_synonym=ECK0702;gene_synonym=JW0703;function=phenotype%3B Not classified;note=putative lactam utilization protein%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=UPF0271 family protein;protein_id=AAC73807.1;db_xref=GI:1786931;db_xref=ASAP:ABE-0002431;db_xref=UniProtKB/Swiss-Prot:P75746;db_xref=EcoGene:EG13308 EMBL gene 745935 746726 . + . ID=.1573;gene=nei;locus_tag=b0714;gene_synonym=ECK0703;gene_synonym=JW0704;db_xref=EcoGene:EG13237 EMBL CDS 745935 746726 . + 0 ID=.1574;gene=nei;locus_tag=b0714;gene_synonym=ECK0703;gene_synonym=JW0704;ec_number=3.2.-.-;function=enzyme%3B DNA - replication%2C repair%2C restriction/modification;note=endonuclease VIII and DNA N-glycosylase with an AP lyase activity%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006281 - DNA repair;codon_start=1;transl_table=11;product=endonuclease VIII and 5-formyluracil/5-hydroxymethyluracil DNA glycosylase;protein_id=AAC73808.1;db_xref=GI:1786932;db_xref=ASAP:ABE-0002433;db_xref=UniProtKB/Swiss-Prot:P50465;db_xref=EcoGene:EG13237 EMBL gene 746723 747769 . - . ID=.1575;gene=abrB;locus_tag=b0715;gene_synonym=ECK0704;gene_synonym=JW5097;gene_synonym=ybgN;db_xref=EcoGene:EG13310 EMBL CDS 746723 747769 . - 0 ID=.1576;gene=abrB;locus_tag=b0715;gene_synonym=ECK0704;gene_synonym=JW5097;gene_synonym=ybgN;function=putative transport%3B Not classified;note=putative transport protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=regulator of aidB expression%3B inner membrane protein;protein_id=AAC73809.2;db_xref=GI:87081776;db_xref=ASAP:ABE-0002435;db_xref=UniProtKB/Swiss-Prot:P75747;db_xref=EcoGene:EG13310 EMBL gene 747921 748982 . - . ID=.1577;gene=ybgO;locus_tag=b0716;gene_synonym=ECK0705;gene_synonym=JW5098;db_xref=EcoGene:EG13311 EMBL CDS 747921 748982 . - 0 ID=.1578;gene=ybgO;locus_tag=b0716;gene_synonym=ECK0705;gene_synonym=JW5098;codon_start=1;transl_table=11;product=putative fimbrial protein;protein_id=AAC73810.2;db_xref=GI:87081777;db_xref=ASAP:ABE-0002441;db_xref=UniProtKB/Swiss-Prot:P75748;db_xref=EcoGene:EG13311 EMBL gene 748979 749707 . - . ID=.1579;gene=ybgP;locus_tag=b0717;gene_synonym=ECK0706;gene_synonym=JW0707;db_xref=EcoGene:EG13312 EMBL CDS 748979 749707 . - 0 ID=.1580;gene=ybgP;locus_tag=b0717;gene_synonym=ECK0706;gene_synonym=JW0707;function=putative factor%3B Surface structures;note=putative chaperone%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=putative periplasmic pilin chaperone;protein_id=AAC73811.1;db_xref=GI:1786936;db_xref=ASAP:ABE-0002443;db_xref=UniProtKB/Swiss-Prot:P75749;db_xref=EcoGene:EG13312 EMBL gene 749722 752169 . - . ID=.1581;gene=ybgQ;locus_tag=b0718;gene_synonym=ECK0707;gene_synonym=JW5099;db_xref=EcoGene:EG13313 EMBL CDS 749722 752169 . - 0 ID=.1582;gene=ybgQ;locus_tag=b0718;gene_synonym=ECK0707;gene_synonym=JW5099;function=putative membrane%3B Not classified;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane;codon_start=1;transl_table=11;product=putative outer membrane protein;protein_id=AAC73812.2;db_xref=GI:87081778;db_xref=ASAP:ABE-0002446;db_xref=UniProtKB/Swiss-Prot:P75750;db_xref=EcoGene:EG13313 EMBL gene 752229 752795 . - . ID=.1583;gene=ybgD;locus_tag=b0719;gene_synonym=ECK0708;gene_synonym=JW0709;db_xref=EcoGene:EG12359 EMBL CDS 752229 752795 . - 0 ID=.1584;gene=ybgD;locus_tag=b0719;gene_synonym=ECK0708;gene_synonym=JW0709;function=putative structural component%3B Surface structures;note=putative fimbrial-like protein%3B GO_component: GO:0009289 - pilus;codon_start=1;transl_table=11;product=putative fimbrial-like adhesin protein;protein_id=AAC73813.1;db_xref=GI:1786938;db_xref=ASAP:ABE-0002448;db_xref=UniProtKB/Swiss-Prot:P37909;db_xref=EcoGene:EG12359 EMBL gene 753185 754468 . - . ID=.1585;gene=gltA;locus_tag=b0720;gene_synonym=ECK0709;gene_synonym=gluT;gene_synonym=icdB;gene_synonym=JW0710;db_xref=EcoGene:EG10402 EMBL CDS 753185 754468 . - 0 ID=.1586;gene=gltA;locus_tag=b0720;gene_synonym=ECK0709;gene_synonym=gluT;gene_synonym=icdB;gene_synonym=JW0710;ec_number=2.3.3.1;function=enzyme%3B Energy metabolism%2C carbon: TCA cycle;note=GO_process: GO:0006099 - tricarboxylic acid cycle%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=citrate synthase;protein_id=AAC73814.1;db_xref=GI:1786939;db_xref=ASAP:ABE-0002451;db_xref=UniProtKB/Swiss-Prot:P0ABH7;db_xref=EcoGene:EG10402 EMBL gene 755177 755566 . + . ID=.1587;gene=sdhC;locus_tag=b0721;gene_synonym=cybA;gene_synonym=ECK0710;gene_synonym=JW0711;db_xref=EcoGene:EG10933 EMBL CDS 755177 755566 . + 0 ID=.1588;gene=sdhC;locus_tag=b0721;gene_synonym=cybA;gene_synonym=ECK0710;gene_synonym=JW0711;function=enzyme%3B Energy metabolism%2C carbon: TCA cycle;note=succinate dehydrogenase%2C cytochrome b556%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006099 - tricarboxylic acid cycle%3B GO_process: GO:0009060 - aerobic respiration%3B GO_process: GO:0017004 - cytochrome complex assembly;codon_start=1;transl_table=11;product=succinate dehydrogenase%2C membrane subunit%2C binds cytochrome b556;protein_id=AAC73815.1;db_xref=GI:1786940;db_xref=ASAP:ABE-0002460;db_xref=UniProtKB/Swiss-Prot:P69054;db_xref=EcoGene:EG10933 EMBL gene 755560 755907 . + . ID=.1589;gene=sdhD;locus_tag=b0722;gene_synonym=ECK0711;gene_synonym=JW0712;db_xref=EcoGene:EG10934 EMBL CDS 755560 755907 . + 0 ID=.1590;gene=sdhD;locus_tag=b0722;gene_synonym=ECK0711;gene_synonym=JW0712;function=enzyme%3B Energy metabolism%2C carbon: TCA cycle;note=succinate dehydrogenase%2C hydrophobic subunit%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006099 - tricarboxylic acid cycle%3B GO_process: GO:0009060 - aerobic respiration;codon_start=1;transl_table=11;product=succinate dehydrogenase%2C membrane subunit%2C binds cytochrome b556;protein_id=AAC73816.1;db_xref=GI:1786941;db_xref=ASAP:ABE-0002464;db_xref=UniProtKB/Swiss-Prot:P0AC44;db_xref=EcoGene:EG10934 EMBL gene 755907 757673 . + . ID=.1591;gene=sdhA;locus_tag=b0723;gene_synonym=ECK0712;gene_synonym=JW0713;db_xref=EcoGene:EG10931 EMBL CDS 755907 757673 . + 0 ID=.1592;gene=sdhA;locus_tag=b0723;gene_synonym=ECK0712;gene_synonym=JW0713;function=enzyme%3B Energy metabolism%2C carbon: TCA cycle;experiment=N-terminus verified by Edman degradation: PMID 9298646%2C9600841%2C9740056;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006099 - tricarboxylic acid cycle%3B GO_process: GO:0009060 - aerobic respiration;codon_start=1;transl_table=11;product=succinate dehydrogenase%2C flavoprotein subunit;protein_id=AAC73817.1;db_xref=GI:1786942;db_xref=ASAP:ABE-0002466;db_xref=UniProtKB/Swiss-Prot:P0AC41;db_xref=EcoGene:EG10931 EMBL gene 757689 758405 . + . ID=.1593;gene=sdhB;locus_tag=b0724;gene_synonym=ECK0713;gene_synonym=JW0714;db_xref=EcoGene:EG10932 EMBL CDS 757689 758405 . + 0 ID=.1594;gene=sdhB;locus_tag=b0724;gene_synonym=ECK0713;gene_synonym=JW0714;function=enzyme%3B Energy metabolism%2C carbon: TCA cycle;experiment=N-terminus verified by Edman degradation: PMID 9298646;note=succinate dehydrogenase%2C iron sulfur protein%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006099 - tricarboxylic acid cycle%3B GO_process: GO:0009060 - aerobic respiration;codon_start=1;transl_table=11;product=succinate dehydrogenase%2C FeS subunit;protein_id=AAC73818.1;db_xref=GI:1786943;db_xref=ASAP:ABE-0002468;db_xref=UniProtKB/Swiss-Prot:P07014;db_xref=EcoGene:EG10932 EMBL repeat_region 758409 758526 . + . ID=.1595;note=RIP67 (repetitive extragenic palindromic) element%3B contains 3 REP sequences and 1 IHF site EMBL gene 758706 761507 . + . ID=.1596;gene=sucA;locus_tag=b0726;gene_synonym=ECK0714;gene_synonym=JW0715;gene_synonym=lys;db_xref=EcoGene:EG10979 EMBL CDS 758706 761507 . + 0 ID=.1597;gene=sucA;locus_tag=b0726;gene_synonym=ECK0714;gene_synonym=JW0715;gene_synonym=lys;ec_number=1.2.4.2;function=enzyme%3B Energy metabolism%2C carbon: TCA cycle;note=2-oxoglutarate dehydrogenase (decarboxylase component)%3B GO_process: GO:0006099 - tricarboxylic acid cycle;codon_start=1;transl_table=11;product=2-oxoglutarate decarboxylase%2C thiamine triphosphate-binding;protein_id=AAC73820.1;db_xref=GI:1786945;db_xref=ASAP:ABE-0002478;db_xref=UniProtKB/Swiss-Prot:P0AFG3;db_xref=EcoGene:EG10979 EMBL gene 761522 762739 . + . ID=.1598;gene=sucB;locus_tag=b0727;gene_synonym=ECK0715;gene_synonym=JW0716;db_xref=EcoGene:EG10980 EMBL CDS 761522 762739 . + 0 ID=.1599;gene=sucB;locus_tag=b0727;gene_synonym=ECK0715;gene_synonym=JW0716;ec_number=2.3.1.61;function=enzyme%3B Energy metabolism%2C carbon: TCA cycle;note=2-oxoglutarate dehydrogenase (dihydrolipoyltranssuccinase E2 component)%3B GO_process: GO:0006099 - tricarboxylic acid cycle;codon_start=1;transl_table=11;product=dihydrolipoyltranssuccinase;protein_id=AAC73821.1;db_xref=GI:1786946;db_xref=ASAP:ABE-0002480;db_xref=UniProtKB/Swiss-Prot:P0AFG6;db_xref=EcoGene:EG10980 EMBL repeat_region 762762 762928 . + . ID=.1600;note=REP68 (repetitive extragenic palindromic) element%3B contains 4 REP sequences EMBL gene 763014 764180 . + . ID=.1601;gene=sucC;locus_tag=b0728;gene_synonym=ECK0716;gene_synonym=JW0717;db_xref=EcoGene:EG10981 EMBL CDS 763014 764180 . + 0 ID=.1602;gene=sucC;locus_tag=b0728;gene_synonym=ECK0716;gene_synonym=JW0717;ec_number=6.2.1.5;function=enzyme%3B Energy metabolism%2C carbon: TCA cycle;experiment=N-terminus verified by Edman degradation: PMID 9298646;note=GO_process: GO:0006099 - tricarboxylic acid cycle;codon_start=1;transl_table=11;product=succinyl-CoA synthetase%2C beta subunit;protein_id=AAC73822.1;db_xref=GI:1786948;db_xref=ASAP:ABE-0002483;db_xref=UniProtKB/Swiss-Prot:P0A836;db_xref=EcoGene:EG10981 EMBL gene 764180 765049 . + . ID=.1603;gene=sucD;locus_tag=b0729;gene_synonym=ECK0717;gene_synonym=JW0718;db_xref=EcoGene:EG10982 EMBL CDS 764180 765049 . + 0 ID=.1604;gene=sucD;locus_tag=b0729;gene_synonym=ECK0717;gene_synonym=JW0718;ec_number=6.2.1.5;function=enzyme%3B Energy metabolism%2C carbon: TCA cycle;note=succinyl-CoA synthetase%2C alpha subunit%3B GO_process: GO:0006099 - tricarboxylic acid cycle;codon_start=1;transl_table=11;product=succinyl-CoA synthetase%2C NAD(P)-binding%2C alpha subunit;protein_id=AAC73823.1;db_xref=GI:1786949;db_xref=ASAP:ABE-0002485;db_xref=UniProtKB/Swiss-Prot:P0AGE9;db_xref=EcoGene:EG10982 EMBL gene 765153 765875 . - . ID=.1605;gene=mngR;locus_tag=b0730;gene_synonym=ECK0718;gene_synonym=farR;gene_synonym=JW0719;gene_synonym=ybgB;db_xref=EcoGene:EG11109 EMBL CDS 765153 765875 . - 0 ID=.1606;gene=mngR;locus_tag=b0730;gene_synonym=ECK0718;gene_synonym=farR;gene_synonym=JW0719;gene_synonym=ybgB;function=regulator%3B Energy metabolism%2C carbon: TCA cycle;note=transcriptional regulator of succinylCoA synthetase operon%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006099 - tricarboxylic acid cycle%3B GO_process: GO:0006350 - transcription%3B GO_process: GO:0006355 - regulation of transcription%2C DNA-dependent;codon_start=1;transl_table=11;product=transcriptional repressor for the mannosyl-D-glycerate catabolic operon;protein_id=AAC73824.1;db_xref=GI:1786950;db_xref=ASAP:ABE-0002487;db_xref=UniProtKB/Swiss-Prot:P13669;db_xref=EcoGene:EG11109 EMBL gene 765984 767960 . + . ID=.1607;gene=mngA;locus_tag=b0731;gene_synonym=ECK0719;gene_synonym=hrsA;gene_synonym=JW0720;db_xref=EcoGene:EG13235 EMBL CDS 765984 767960 . + 0 ID=.1608;gene=mngA;locus_tag=b0731;gene_synonym=ECK0719;gene_synonym=hrsA;gene_synonym=JW0720;ec_number=2.7.1.69;function=enzyme%3B Proteins - translation and modification;note=protein modification enzyme%2C induction of ompC%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0006464 - protein modification process%3B GO_process: GO:0009266 - response to temperature stimulus;codon_start=1;transl_table=11;product=fused 2-O-a-mannosyl-D-glycerate specific PTS enzymes: IIA component/IIB component/IIC component;protein_id=AAC73825.1;db_xref=GI:1786951;db_xref=ASAP:ABE-0002493;db_xref=UniProtKB/Swiss-Prot:P54745;db_xref=EcoGene:EG13235 EMBL gene 767978 770611 . + . ID=.1609;gene=mngB;locus_tag=b0732;gene_synonym=ECK0720;gene_synonym=JW0721;gene_synonym=ybgG;db_xref=EcoGene:EG13236 EMBL CDS 767978 770611 . + 0 ID=.1610;gene=mngB;locus_tag=b0732;gene_synonym=ECK0720;gene_synonym=JW0721;gene_synonym=ybgG;function=enzyme%3B Not classified;note=putative sugar hydrolase%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=alpha-mannosidase;protein_id=AAC73826.1;db_xref=GI:1786952;db_xref=ASAP:ABE-0002495;db_xref=UniProtKB/Swiss-Prot:P54746;db_xref=EcoGene:EG13236 EMBL repeat_region 770675 770773 . + . ID=.1611;note=RIP69 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 771458 773026 . + . ID=.1612;gene=cydA;locus_tag=b0733;gene_synonym=ECK0721;gene_synonym=JW0722;db_xref=EcoGene:EG10173 EMBL CDS 771458 773026 . + 0 ID=.1613;gene=cydA;locus_tag=b0733;gene_synonym=ECK0721;gene_synonym=JW0722;ec_number=1.9.3.-;function=enzyme%3B Energy metabolism%2C carbon: Electron transport;experiment=N-terminus verified by Edman degradation: PMID 10428033;note=cytochrome d terminal oxidase%2C polypeptide subunit I%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=cytochrome d terminal oxidase%2C subunit I;protein_id=AAC73827.2;db_xref=GI:87081779;db_xref=ASAP:ABE-0002499;db_xref=UniProtKB/Swiss-Prot:P0ABJ9;db_xref=EcoGene:EG10173 EMBL gene 773042 774181 . + . ID=.1614;gene=cydB;locus_tag=b0734;gene_synonym=ECK0722;gene_synonym=JW0723;db_xref=EcoGene:EG10174 EMBL CDS 773042 774181 . + 0 ID=.1615;gene=cydB;locus_tag=b0734;gene_synonym=ECK0722;gene_synonym=JW0723;ec_number=1.9.3.-;function=enzyme%3B Energy metabolism%2C carbon: Electron transport;note=cytochrome d terminal oxidase polypeptide subunit II%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=cytochrome d terminal oxidase%2C subunit II;protein_id=AAC73828.1;db_xref=GI:1786954;db_xref=ASAP:ABE-0002501;db_xref=UniProtKB/Swiss-Prot:P0ABK2;db_xref=EcoGene:EG10174 EMBL gene 774196 774309 . + . ID=.1616;gene=cydX;locus_tag=b4515;gene_synonym=ECK0723;gene_synonym=JW0724;gene_synonym=ybgT;db_xref=EcoGene:EG14329 EMBL CDS 774196 774309 . + 0 ID=.1617;gene=cydX;locus_tag=b4515;gene_synonym=ECK0723;gene_synonym=JW0724;gene_synonym=ybgT;note=GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=cytochrome d (bd-I) ubiquinol oxidase subunit X;protein_id=ABD18645.1;db_xref=GI:87081780;db_xref=ASAP:ABE-0285036;db_xref=UniProtKB/Swiss-Prot:P56100;db_xref=EcoGene:EG14329 EMBL gene 774309 774602 . + . ID=.1618;gene=ybgE;locus_tag=b0735;gene_synonym=ECK0724;gene_synonym=JW0725;db_xref=EcoGene:EG12395 EMBL CDS 774309 774602 . + 0 ID=.1619;gene=ybgE;locus_tag=b0735;gene_synonym=ECK0724;gene_synonym=JW0725;codon_start=1;transl_table=11;product=putative inner membrane protein in cydABX-ybgE operon;protein_id=AAC73829.1;db_xref=GI:1786956;db_xref=ASAP:ABE-0002505;db_xref=UniProtKB/Swiss-Prot:P0AAV0;db_xref=EcoGene:EG12395 EMBL gene 774752 775156 . + . ID=.1620;gene=ybgC;locus_tag=b0736;gene_synonym=ECK0725;gene_synonym=JW0726;db_xref=EcoGene:EG11110 EMBL CDS 774752 775156 . + 0 ID=.1621;gene=ybgC;locus_tag=b0736;gene_synonym=ECK0725;gene_synonym=JW0726;function=enzyme%3B Fatty acid and phosphatidic acid biosynthesis;codon_start=1;transl_table=11;product=acyl-CoA thioester hydrolase;protein_id=AAC73830.1;db_xref=GI:1786957;db_xref=ASAP:ABE-0002508;db_xref=UniProtKB/Swiss-Prot:P0A8Z3;db_xref=EcoGene:EG11110 EMBL gene 775153 775845 . + . ID=.1622;gene=tolQ;locus_tag=b0737;gene_synonym=ECK0726;gene_synonym=fii;gene_synonym=JW0727;gene_synonym=tolP;db_xref=EcoGene:EG11010 EMBL CDS 775153 775845 . + 0 ID=.1623;gene=tolQ;locus_tag=b0737;gene_synonym=ECK0726;gene_synonym=fii;gene_synonym=JW0727;gene_synonym=tolP;function=membrane%3B Colicin-related functions;experiment=N-terminus verified by Edman degradation: PMID 8300535;note=inner membrane protein%2C membrane-spanning%2C maintains integrity of cell envelope%3B tolerance to group A colicins%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=membrane spanning protein in TolA-TolQ-TolR complex;protein_id=AAC73831.1;db_xref=GI:1786958;db_xref=ASAP:ABE-0002511;db_xref=UniProtKB/Swiss-Prot:P0ABU9;db_xref=EcoGene:EG11010 EMBL gene 775849 776277 . + . ID=.1624;gene=tolR;locus_tag=b0738;gene_synonym=ECK0727;gene_synonym=JW0728;db_xref=EcoGene:EG11011 EMBL CDS 775849 776277 . + 0 ID=.1625;gene=tolR;locus_tag=b0738;gene_synonym=ECK0727;gene_synonym=JW0728;function=putative transport%3B Not classified;note=putative inner membrane protein%2C involved in the tonB-independent uptake of group A colicins%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=membrane spanning protein in TolA-TolQ-TolR complex;protein_id=AAC73832.1;db_xref=GI:1786959;db_xref=ASAP:ABE-0002513;db_xref=UniProtKB/Swiss-Prot:P0ABV6;db_xref=EcoGene:EG11011 EMBL gene 776342 777607 . + . ID=.1626;gene=tolA;locus_tag=b0739;gene_synonym=cim;gene_synonym=ECK0728;gene_synonym=excC;gene_synonym=JW0729;gene_synonym=lky;db_xref=EcoGene:EG11007 EMBL CDS 776342 777607 . + 0 ID=.1627;gene=tolA;locus_tag=b0739;gene_synonym=cim;gene_synonym=ECK0728;gene_synonym=excC;gene_synonym=JW0729;gene_synonym=lky;function=membrane%3B Colicin-related functions;note=membrane spanning protein%2C required for outer membrane integrity%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=membrane anchored protein in TolA-TolQ-TolR complex;protein_id=AAC73833.1;db_xref=GI:1786960;db_xref=ASAP:ABE-0002515;db_xref=UniProtKB/Swiss-Prot:P19934;db_xref=EcoGene:EG11007 EMBL gene 777740 779032 . + . ID=.1628;gene=tolB;locus_tag=b0740;gene_synonym=ECK0729;gene_synonym=JW5100;db_xref=EcoGene:EG11008 EMBL CDS 777740 779032 . + 0 ID=.1629;gene=tolB;locus_tag=b0740;gene_synonym=ECK0729;gene_synonym=JW5100;function=factor%3B Colicin-related functions;note=periplasmic protein involved in the tonb-independent uptake of group A colicins%3B GO_component: GO:0042597 - periplasmic space;codon_start=1;transl_table=11;product=periplasmic protein;protein_id=AAC73834.1;db_xref=GI:1786961;db_xref=ASAP:ABE-0002517;db_xref=UniProtKB/Swiss-Prot:P0A855;db_xref=EcoGene:EG11008 EMBL gene 779067 779588 . + . ID=.1630;gene=pal;locus_tag=b0741;gene_synonym=ECK0730;gene_synonym=excC;gene_synonym=JW0731;db_xref=EcoGene:EG10684 EMBL CDS 779067 779588 . + 0 ID=.1631;gene=pal;locus_tag=b0741;gene_synonym=ECK0730;gene_synonym=excC;gene_synonym=JW0731;function=membrane%3B Macromolecule synthesis%2C modification: Lipoprotein;note=peptidoglycan-associated lipoprotein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=peptidoglycan-associated outer membrane lipoprotein;protein_id=AAC73835.1;db_xref=GI:1786962;db_xref=ASAP:ABE-0002521;db_xref=UniProtKB/Swiss-Prot:P0A912;db_xref=EcoGene:EG10684 EMBL gene 779598 780389 . + . ID=.1632;gene=ybgF;locus_tag=b0742;gene_synonym=ECK0731;gene_synonym=JW0732;db_xref=EcoGene:EG12854 EMBL CDS 779598 780389 . + 0 ID=.1633;gene=ybgF;locus_tag=b0742;gene_synonym=ECK0731;gene_synonym=JW0732;note=GO_component: GO:0042597 - periplasmic space;codon_start=1;transl_table=11;product=periplasmic TolA-binding protein;protein_id=AAC73836.1;db_xref=GI:1786963;db_xref=ASAP:ABE-0002523;db_xref=UniProtKB/Swiss-Prot:P45955;db_xref=EcoGene:EG12854 EMBL gene 780554 780629 . + . ID=.1634;gene=lysT;locus_tag=b0743;gene_synonym=ECK0732;gene_synonym=JWR0018;gene_synonym=lysTalpha;gene_synonym=sua;gene_synonym=supG;gene_synonym=supL;db_xref=EcoGene:EG30055 EMBL tRNA 780554 780629 . + . ID=.1635;gene=lysT;locus_tag=b0743;gene_synonym=ECK0732;gene_synonym=JWR0018;gene_synonym=lysTalpha;gene_synonym=sua;gene_synonym=supG;gene_synonym=supL;product=tRNA-Lys;note=anticodon: UUU;db_xref=ASAP:ABE-0002525;db_xref=EcoGene:EG30055 EMBL gene 780765 780840 . + . ID=.1636;gene=valT;locus_tag=b0744;gene_synonym=ECK0733;gene_synonym=JWR0019;db_xref=EcoGene:EG30109 EMBL tRNA 780765 780840 . + . ID=.1637;gene=valT;locus_tag=b0744;gene_synonym=ECK0733;gene_synonym=JWR0019;product=tRNA-Val;note=anticodon: UAC;db_xref=ASAP:ABE-0002527;db_xref=EcoGene:EG30109 EMBL gene 780843 780918 . + . ID=.1638;gene=lysW;locus_tag=b0745;gene_synonym=ECK0734;gene_synonym=JWR0020;gene_synonym=lysTbeta;gene_synonym=su;db_xref=EcoGene:EG30057 EMBL tRNA 780843 780918 . + . ID=.1639;gene=lysW;locus_tag=b0745;gene_synonym=ECK0734;gene_synonym=JWR0020;gene_synonym=lysTbeta;gene_synonym=su;product=tRNA-Lys;note=anticodon: UUU;db_xref=ASAP:ABE-0002529;db_xref=EcoGene:EG30057 EMBL gene 781068 781143 . + . ID=.1640;gene=valZ;locus_tag=b0746;gene_synonym=ECK0735;gene_synonym=JWR0021;db_xref=EcoGene:EG31125 EMBL tRNA 781068 781143 . + . ID=.1641;gene=valZ;locus_tag=b0746;gene_synonym=ECK0735;gene_synonym=JWR0021;product=tRNA-Val;note=anticodon: UAC;db_xref=ASAP:ABE-0002531;db_xref=EcoGene:EG31125 EMBL gene 781147 781222 . + . ID=.1642;gene=lysY;locus_tag=b0747;gene_synonym=ECK0736;gene_synonym=JWR0022;db_xref=EcoGene:EG31123 EMBL tRNA 781147 781222 . + . ID=.1643;gene=lysY;locus_tag=b0747;gene_synonym=ECK0736;gene_synonym=JWR0022;product=tRNA-Lys;note=anticodon: UUU;db_xref=ASAP:ABE-0002533;db_xref=EcoGene:EG31123 EMBL gene 781369 781444 . + . ID=.1644;gene=lysZ;locus_tag=b0748;gene_synonym=ECK0737;gene_synonym=JWR0023;db_xref=EcoGene:EG31124 EMBL tRNA 781369 781444 . + . ID=.1645;gene=lysZ;locus_tag=b0748;gene_synonym=ECK0737;gene_synonym=JWR0023;product=tRNA-Lys;note=anticodon: UUU;db_xref=ASAP:ABE-0002535;db_xref=EcoGene:EG31124 EMBL gene 781577 781652 . + . ID=.1646;gene=lysQ;locus_tag=b0749;gene_synonym=ECK0738;gene_synonym=JWR0024;db_xref=EcoGene:EG31122 EMBL tRNA 781577 781652 . + . ID=.1647;gene=lysQ;locus_tag=b0749;gene_synonym=ECK0738;gene_synonym=JWR0024;product=tRNA-Lys;note=anticodon: UUU;db_xref=ASAP:ABE-0002537;db_xref=EcoGene:EG31122 EMBL gene 782085 783128 . + . ID=.1648;gene=nadA;locus_tag=b0750;gene_synonym=ECK0739;gene_synonym=JW0733;gene_synonym=nicA;db_xref=EcoGene:EG10630 EMBL CDS 782085 783128 . + 0 ID=.1649;gene=nadA;locus_tag=b0750;gene_synonym=ECK0739;gene_synonym=JW0733;gene_synonym=nicA;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Pyridine nucleotide;note=quinolinate synthetase%2C A protein%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009435 - NAD biosynthetic process;codon_start=1;transl_table=11;product=quinolinate synthase%2C subunit A;protein_id=AAC73837.1;db_xref=GI:1786964;db_xref=ASAP:ABE-0002541;db_xref=UniProtKB/Swiss-Prot:P11458;db_xref=EcoGene:EG10630 EMBL gene 783166 783885 . + . ID=.1650;gene=pnuC;locus_tag=b0751;gene_synonym=ECK0740;gene_synonym=JW0734;db_xref=EcoGene:EG11700 EMBL CDS 783166 783885 . + 0 ID=.1651;gene=pnuC;locus_tag=b0751;gene_synonym=ECK0740;gene_synonym=JW0734;function=transport%3B Transport of small molecules: Nucleosides%2C purines%2C pyrimidines;note=required for NMN transport%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion;codon_start=1;transl_table=11;product=nicotinamide riboside transporter;protein_id=AAC73838.1;db_xref=GI:1786965;db_xref=ASAP:ABE-0002547;db_xref=UniProtKB/Swiss-Prot:P0AFK2;db_xref=EcoGene:EG11700 EMBL gene 783882 784823 . - . ID=.1652;gene=zitB;locus_tag=b0752;gene_synonym=ECK0741;gene_synonym=JW0735;gene_synonym=ybgR;db_xref=EcoGene:EG13662 EMBL CDS 783882 784823 . - 0 ID=.1653;gene=zitB;locus_tag=b0752;gene_synonym=ECK0741;gene_synonym=JW0735;gene_synonym=ybgR;function=putative transport%3B Not classified;note=putative transport system permease protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=zinc efflux system;protein_id=AAC73839.1;db_xref=GI:1786966;db_xref=ASAP:ABE-0002549;db_xref=UniProtKB/Swiss-Prot:P75757;db_xref=EcoGene:EG13662 EMBL gene 784937 785317 . - . ID=.1654;gene=ybgS;locus_tag=b0753;gene_synonym=ECK0742;gene_synonym=JW0736;db_xref=EcoGene:EG13663 EMBL CDS 784937 785317 . - 0 ID=.1655;gene=ybgS;locus_tag=b0753;gene_synonym=ECK0742;gene_synonym=JW0736;function=putative regulator%3B Not classified;note=putative homeobox protein;codon_start=1;transl_table=11;product=putative periplasmic protein;protein_id=AAC73840.1;db_xref=GI:1786968;db_xref=ASAP:ABE-0002553;db_xref=UniProtKB/Swiss-Prot:P0AAV6;db_xref=EcoGene:EG13663 EMBL gene 785633 786685 . + . ID=.1656;gene=aroG;locus_tag=b0754;gene_synonym=ECK0743;gene_synonym=JW0737;db_xref=EcoGene:EG10079 EMBL CDS 785633 786685 . + 0 ID=.1657;gene=aroG;locus_tag=b0754;gene_synonym=ECK0743;gene_synonym=JW0737;ec_number=2.5.1.54;function=enzyme%3B Amino acid biosynthesis: Phenylalanine;experiment=N-terminus verified by Edman degradation: PMID 9298646%2C9740056;note=3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase%2C phenylalanine repressible)%3B GO_process: GO:0009094 - L-phenylalanine biosynthetic process;codon_start=1;transl_table=11;product=3-deoxy-D-arabino-heptulosonate-7-phosphate synthase%2C phenylalanine repressible;protein_id=AAC73841.1;db_xref=GI:1786969;db_xref=ASAP:ABE-0002560;db_xref=UniProtKB/Swiss-Prot:P0AB91;db_xref=EcoGene:EG10079 EMBL repeat_region 786735 786769 . + . ID=.1658;note=REP70 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 786843 787595 . - . ID=.1659;gene=gpmA;locus_tag=b0755;gene_synonym=ECK0744;gene_synonym=gpm;gene_synonym=JW0738;db_xref=EcoGene:EG11699 EMBL CDS 786843 787595 . - 0 ID=.1660;gene=gpmA;locus_tag=b0755;gene_synonym=ECK0744;gene_synonym=gpm;gene_synonym=JW0738;function=enzyme%3B Energy metabolism%2C carbon: Glycolysis;note=GO_process: GO:0006096 - glycolysis%3B GO_process: GO:0006094 - gluconeogenesis;codon_start=1;transl_table=11;product=phosphoglyceromutase 1;protein_id=AAC73842.1;db_xref=GI:1786970;db_xref=ASAP:ABE-0002563;db_xref=UniProtKB/Swiss-Prot:P62707;db_xref=EcoGene:EG11699 EMBL gene 787797 788837 . - . ID=.1661;gene=galM;locus_tag=b0756;gene_synonym=ECK0745;gene_synonym=JW0739;db_xref=EcoGene:EG11698 EMBL CDS 787797 788837 . - 0 ID=.1662;gene=galM;locus_tag=b0756;gene_synonym=ECK0745;gene_synonym=JW0739;ec_number=5.1.3.3;function=enzyme%3B Central intermediary metabolism: Pool%2C multipurpose conversions;note=GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=aldose 1-epimerase%3B type-1 mutarotase%3B galactose mutarotase;protein_id=AAC73843.1;db_xref=GI:1786971;db_xref=ASAP:ABE-0002566;db_xref=UniProtKB/Swiss-Prot:P0A9C3;db_xref=EcoGene:EG11698 EMBL gene 788831 789979 . - . ID=.1663;gene=galK;locus_tag=b0757;gene_synonym=ECK0746;gene_synonym=galA;gene_synonym=JW0740;db_xref=EcoGene:EG10363 EMBL CDS 788831 789979 . - 0 ID=.1664;gene=galK;locus_tag=b0757;gene_synonym=ECK0746;gene_synonym=galA;gene_synonym=JW0740;ec_number=2.7.1.6;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0006012 - galactose metabolic process%3B GO_process: GO:0009242 - colanic acid biosynthetic process%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0009269 - response to desiccation;codon_start=1;transl_table=11;product=galactokinase;protein_id=AAC73844.1;db_xref=GI:1786972;db_xref=ASAP:ABE-0002568;db_xref=UniProtKB/Swiss-Prot:P0A6T3;db_xref=EcoGene:EG10363 EMBL gene 789983 791029 . - . ID=.1665;gene=galT;locus_tag=b0758;gene_synonym=ECK0747;gene_synonym=galB;gene_synonym=JW0741;db_xref=EcoGene:EG10366 EMBL CDS 789983 791029 . - 0 ID=.1666;gene=galT;locus_tag=b0758;gene_synonym=ECK0747;gene_synonym=galB;gene_synonym=JW0741;ec_number=2.7.7.10;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0006012 - galactose metabolic process%3B GO_process: GO:0009242 - colanic acid biosynthetic process%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0009269 - response to desiccation;codon_start=1;transl_table=11;product=galactose-1-phosphate uridylyltransferase;protein_id=AAC73845.1;db_xref=GI:1786973;db_xref=ASAP:ABE-0002573;db_xref=UniProtKB/Swiss-Prot:P09148;db_xref=EcoGene:EG10366 EMBL gene 791039 792055 . - . ID=.1667;gene=galE;locus_tag=b0759;gene_synonym=ECK0748;gene_synonym=galD;gene_synonym=JW0742;db_xref=EcoGene:EG10362 EMBL CDS 791039 792055 . - 0 ID=.1668;gene=galE;locus_tag=b0759;gene_synonym=ECK0748;gene_synonym=galD;gene_synonym=JW0742;ec_number=5.1.3.2;function=enzyme%3B Degradation of small molecules: Carbon compounds;experiment=N-terminus verified by Edman degradation: PMID 4613352%2C9119048;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0006012 - galactose metabolic process%3B GO_process: GO:0009242 - colanic acid biosynthetic process%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0009435 - NAD biosynthetic process%3B GO_process: GO:0009269 - response to desiccation;codon_start=1;transl_table=11;product=UDP-galactose-4-epimerase;protein_id=AAC73846.1;db_xref=GI:1786974;db_xref=ASAP:ABE-0002575;db_xref=UniProtKB/Swiss-Prot:P09147;db_xref=EcoGene:EG10362 EMBL repeat_region 792264 792297 . + . ID=.1669;note=REP71 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 792316 793788 . - . ID=.1670;gene=modF;locus_tag=b0760;gene_synonym=chlD;gene_synonym=ECK0749;gene_synonym=JW0743;gene_synonym=phrA;db_xref=EcoGene:EG11677 EMBL CDS 792316 793788 . - 0 ID=.1671;gene=modF;locus_tag=b0760;gene_synonym=chlD;gene_synonym=ECK0749;gene_synonym=JW0743;gene_synonym=phrA;function=transport%3B Transport of small molecules: Anions;note=ATP-binding component of molybdate transport system%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0042888 - molybdenum ion transmembrane transporter activity%3B GO_process: GO:0006777 - Mo-molybdopterin cofactor biosynthetic process;codon_start=1;transl_table=11;product=molybdate ABC transporter ATPase;protein_id=AAC73847.1;db_xref=GI:1786975;db_xref=ASAP:ABE-0002582;db_xref=UniProtKB/Swiss-Prot:P31060;db_xref=EcoGene:EG11677 EMBL gene 793856 794644 . - . ID=.1672;gene=modE;locus_tag=b0761;gene_synonym=chlD;gene_synonym=ECK0750;gene_synonym=JW0744;gene_synonym=modR;db_xref=EcoGene:EG13227 EMBL CDS 793856 794644 . - 0 ID=.1673;gene=modE;locus_tag=b0761;gene_synonym=chlD;gene_synonym=ECK0750;gene_synonym=JW0744;gene_synonym=modR;function=regulator%3B Transport of small molecules: Anions;note=molybdate uptake regulatory protein%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006777 - Mo-molybdopterin cofactor biosynthetic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=transcriptional repressor for the molybdenum transport operon modABC;protein_id=AAC73848.1;db_xref=GI:1786976;db_xref=ASAP:ABE-0002585;db_xref=UniProtKB/Swiss-Prot:P0A9G8;db_xref=EcoGene:EG13227 EMBL gene 794773 794922 . + . ID=.1674;gene=acrZ;locus_tag=b0762;gene_synonym=ECK0751;gene_synonym=JW5102;gene_synonym=ybhT;db_xref=EcoGene:EG14328 EMBL CDS 794773 794922 . + 0 ID=.1675;gene=acrZ;locus_tag=b0762;gene_synonym=ECK0751;gene_synonym=JW5102;gene_synonym=ybhT;codon_start=1;transl_table=11;product=AcrAB-TolC efflux pump accessory protein%2C membrane-associated;protein_id=AAC73849.1;db_xref=GI:1786977;db_xref=ASAP:ABE-0002595;db_xref=UniProtKB/Swiss-Prot:P0AAW9;db_xref=EcoGene:EG14328 EMBL gene 795089 795862 . + . ID=.1676;gene=modA;locus_tag=b0763;gene_synonym=ECK0752;gene_synonym=JW0746;db_xref=EcoGene:EG12427 EMBL CDS 795089 795862 . + 0 ID=.1677;gene=modA;locus_tag=b0763;gene_synonym=ECK0752;gene_synonym=JW0746;function=transport%3B Transport of small molecules: Anions;note=molybdate-binding periplasmic protein%3B permease%3B periplasmic-binding component of ABC superfamily%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0006777 - Mo-molybdopterin cofactor biosynthetic process;codon_start=1;transl_table=11;product=molybdate ABC transporter periplasmic binding protein%3B chlorate resistance protein;protein_id=AAC73850.1;db_xref=GI:1786979;db_xref=ASAP:ABE-0002601;db_xref=UniProtKB/Swiss-Prot:P37329;db_xref=EcoGene:EG12427 EMBL gene 795862 796551 . + . ID=.1678;gene=modB;locus_tag=b0764;gene_synonym=chlJ;gene_synonym=ECK0753;gene_synonym=JW0747;db_xref=EcoGene:EG10002 EMBL CDS 795862 796551 . + 0 ID=.1679;gene=modB;locus_tag=b0764;gene_synonym=chlJ;gene_synonym=ECK0753;gene_synonym=JW0747;function=transport%3B Transport of small molecules: Anions;note=molybdate transport permease protein%3B membrane component of ABC superfamily%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=molybdate ABC transporter permease%3B chlorate resistance protein;protein_id=AAC73851.1;db_xref=GI:1786980;db_xref=ASAP:ABE-0002603;db_xref=UniProtKB/Swiss-Prot:P0AF01;db_xref=EcoGene:EG10002 EMBL gene 796554 797612 . + . ID=.1680;gene=modC;locus_tag=b0765;gene_synonym=chlD;gene_synonym=ECK0754;gene_synonym=JW0748;gene_synonym=narD;db_xref=EcoGene:EG10152 EMBL CDS 796554 797612 . + 0 ID=.1681;gene=modC;locus_tag=b0765;gene_synonym=chlD;gene_synonym=ECK0754;gene_synonym=JW0748;gene_synonym=narD;ec_number=3.6.3.29;function=transport%3B Transport of small molecules: Anions;note=ATP-binding component of molybdate transport%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006777 - Mo-molybdopterin cofactor biosynthetic process;codon_start=1;transl_table=11;product=molybdate ABC transporter ATPase%3B chlorate resistance protein;protein_id=AAC73852.1;db_xref=GI:1786981;db_xref=ASAP:ABE-0002605;db_xref=UniProtKB/Swiss-Prot:P09833;db_xref=EcoGene:EG10152 EMBL gene 797613 798431 . - . ID=.1682;gene=ybhA;locus_tag=b0766;gene_synonym=ECK0755;gene_synonym=JW0749;gene_synonym=modD;db_xref=EcoGene:EG11239 EMBL CDS 797613 798431 . - 0 ID=.1683;gene=ybhA;locus_tag=b0766;gene_synonym=ECK0755;gene_synonym=JW0749;gene_synonym=modD;function=putative enzyme%3B Not classified;note=putative phosphatase;codon_start=1;transl_table=11;product=pyridoxal phosphate (PLP) phosphatase;protein_id=AAC73853.1;db_xref=GI:1786982;db_xref=ASAP:ABE-0002607;db_xref=UniProtKB/Swiss-Prot:P21829;db_xref=EcoGene:EG11239 EMBL gene 798586 799581 . + . ID=.1684;gene=pgl;locus_tag=b0767;gene_synonym=blu;gene_synonym=ECK0756;gene_synonym=JW0750;gene_synonym=ybhE;db_xref=EcoGene:EG13231 EMBL CDS 798586 799581 . + 0 ID=.1685;gene=pgl;locus_tag=b0767;gene_synonym=blu;gene_synonym=ECK0756;gene_synonym=JW0750;gene_synonym=ybhE;ec_number=3.1.1.31;function=orf%3B Not classified;note=putative isomerase;codon_start=1;transl_table=11;product=6-phosphogluconolactonase;protein_id=AAC73854.1;db_xref=GI:1786983;db_xref=ASAP:ABE-0002611;db_xref=UniProtKB/Swiss-Prot:P52697;db_xref=EcoGene:EG13231 EMBL gene 799622 800575 . - . ID=.1686;gene=ybhD;locus_tag=b0768;gene_synonym=ECK0757;gene_synonym=JW5896;db_xref=EcoGene:EG13230 EMBL CDS 799622 800575 . - 0 ID=.1687;gene=ybhD;locus_tag=b0768;gene_synonym=ECK0757;gene_synonym=JW5896;function=putative regulator%3B Not classified;note=putative transcriptional regulator LYSR-type%3B GO_function: GO:0016563 - transcription activator activity%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=putative DNA-binding transcriptional regulator;protein_id=AAC73855.2;db_xref=GI:145693105;db_xref=ASAP:ABE-0002613;db_xref=UniProtKB/Swiss-Prot:P52696;db_xref=EcoGene:EG13230 EMBL gene 800759 801811 . + . ID=.1688;gene=ybhH;locus_tag=b0769;gene_synonym=ECK0758;gene_synonym=JW0752;db_xref=EcoGene:EG13664 EMBL CDS 800759 801811 . + 0 ID=.1689;gene=ybhH;locus_tag=b0769;gene_synonym=ECK0758;gene_synonym=JW0752;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=putative PrpF family isomerase;protein_id=AAC73856.1;db_xref=GI:1786985;db_xref=ASAP:ABE-0002618;db_xref=UniProtKB/Swiss-Prot:P0AAV8;db_xref=EcoGene:EG13664 EMBL gene 801887 803320 . + . ID=.1690;gene=ybhI;locus_tag=b0770;gene_synonym=ECK0759;gene_synonym=JW0753;db_xref=EcoGene:EG13665 EMBL CDS 801887 803320 . + 0 ID=.1691;gene=ybhI;locus_tag=b0770;gene_synonym=ECK0759;gene_synonym=JW0753;function=orf%3B Not classified;note=putative membrane pump protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative DASS family tricarboxylate or dicarboxylate transporter;protein_id=AAC73857.1;db_xref=GI:1786986;db_xref=ASAP:ABE-0002621;db_xref=UniProtKB/Swiss-Prot:P75763;db_xref=EcoGene:EG13665 EMBL gene 803503 805764 . + . ID=.1692;gene=ybhJ;locus_tag=b0771;gene_synonym=ECK0760;gene_synonym=JW5103;db_xref=EcoGene:EG13666 EMBL CDS 803503 805764 . + 0 ID=.1693;gene=ybhJ;locus_tag=b0771;gene_synonym=ECK0760;gene_synonym=JW5103;function=putative enzyme%3B Not classified;note=putative enzyme;codon_start=1;transl_table=11;product=aconitase family protein;protein_id=AAC73858.2;db_xref=GI:87081781;db_xref=ASAP:ABE-0002626;db_xref=UniProtKB/Swiss-Prot:P75764;db_xref=EcoGene:EG13666 EMBL repeat_region 805804 805981 . + . ID=.1694;note=REP72 (repetitive extragenic palindromic) element%3B contains 4 REP sequences EMBL gene 805998 807281 . - . ID=.1695;gene=ybhC;locus_tag=b0772;gene_synonym=ECK0761;gene_synonym=JW0755;db_xref=EcoGene:EG12875 EMBL CDS 805998 807281 . - 0 ID=.1696;gene=ybhC;locus_tag=b0772;gene_synonym=ECK0761;gene_synonym=JW0755;function=putative enzyme;note=putative pectinesterase%3B GO_component: GO:0009279 - cell outer membrane%3B GO_process: GO:0008152 - metabolic process%3B GO_process: GO:0000272 - polysaccharide catabolic process;codon_start=1;transl_table=11;product=acyl-CoA thioesterase%2C lipoprotein;protein_id=AAC73859.1;db_xref=GI:1786989;db_xref=ASAP:ABE-0002629;db_xref=UniProtKB/Swiss-Prot:P46130;db_xref=EcoGene:EG12875 EMBL gene 807433 807909 . - . ID=.1697;gene=ybhB;locus_tag=b0773;gene_synonym=ECK0762;gene_synonym=JW0756;db_xref=EcoGene:EG11238 EMBL CDS 807433 807909 . - 0 ID=.1698;gene=ybhB;locus_tag=b0773;gene_synonym=ECK0762;gene_synonym=JW0756;codon_start=1;transl_table=11;product=kinase inhibitor homolog%2C UPF0098 family;protein_id=AAC73860.1;db_xref=GI:1786990;db_xref=ASAP:ABE-0002632;db_xref=UniProtKB/Swiss-Prot:P12994;db_xref=EcoGene:EG11238 EMBL gene 807968 809257 . - . ID=.1699;gene=bioA;locus_tag=b0774;gene_synonym=ECK0763;gene_synonym=JW0757;db_xref=EcoGene:EG10117 EMBL CDS 807968 809257 . - 0 ID=.1700;gene=bioA;locus_tag=b0774;gene_synonym=ECK0763;gene_synonym=JW0757;ec_number=2.6.1.62;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Biotin;note=7%2C8-diaminopelargonic acid synthetase%3B GO_process: GO:0009102 - biotin biosynthetic process;codon_start=1;transl_table=11;product=7%2C8-diaminopelargonic acid synthase%2C PLP-dependent;protein_id=AAC73861.1;db_xref=GI:1786991;db_xref=ASAP:ABE-0002635;db_xref=UniProtKB/Swiss-Prot:P12995;db_xref=EcoGene:EG10117 EMBL gene 809344 810384 . + . ID=.1701;gene=bioB;locus_tag=b0775;gene_synonym=ECK0764;gene_synonym=JW0758;db_xref=EcoGene:EG10118 EMBL CDS 809344 810384 . + 0 ID=.1702;gene=bioB;locus_tag=b0775;gene_synonym=ECK0764;gene_synonym=JW0758;ec_number=2.8.1.6;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Biotin;experiment=N-terminus verified by Edman degradation: PMID 8142361;note=biotin synthesis%2C sulfur insertion?%3B GO_process: GO:0009102 - biotin biosynthetic process;codon_start=1;transl_table=11;product=biotin synthase;protein_id=AAC73862.1;db_xref=GI:1786992;db_xref=ASAP:ABE-0002644;db_xref=UniProtKB/Swiss-Prot:P12996;db_xref=EcoGene:EG10118 EMBL gene 810381 811535 . + . ID=.1703;gene=bioF;locus_tag=b0776;gene_synonym=ECK0765;gene_synonym=JW0759;db_xref=EcoGene:EG10121 EMBL CDS 810381 811535 . + 0 ID=.1704;gene=bioF;locus_tag=b0776;gene_synonym=ECK0765;gene_synonym=JW0759;ec_number=2.3.1.47;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Biotin;note=GO_process: GO:0009102 - biotin biosynthetic process;codon_start=1;transl_table=11;product=8-amino-7-oxononanoate synthase;protein_id=AAC73863.1;db_xref=GI:1786993;db_xref=ASAP:ABE-0002646;db_xref=UniProtKB/Swiss-Prot:P12998;db_xref=EcoGene:EG10121 EMBL gene 811522 812277 . + . ID=.1705;gene=bioC;locus_tag=b0777;gene_synonym=ECK0766;gene_synonym=JW0760;db_xref=EcoGene:EG10119 EMBL CDS 811522 812277 . + 0 ID=.1706;gene=bioC;locus_tag=b0777;gene_synonym=ECK0766;gene_synonym=JW0760;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Biotin;note=biotin biosynthesis%3B reaction prior to pimeloyl CoA%3B GO_process: GO:0009102 - biotin biosynthetic process;codon_start=1;transl_table=11;product=malonyl-ACP O-methyltransferase%2C SAM-dependent;protein_id=AAC73864.1;db_xref=GI:1786994;db_xref=ASAP:ABE-0002648;db_xref=UniProtKB/Swiss-Prot:P12999;db_xref=EcoGene:EG10119 EMBL gene 812270 812947 . + . ID=.1707;gene=bioD;locus_tag=b0778;gene_synonym=ECK0767;gene_synonym=JW0761;db_xref=EcoGene:EG10120 EMBL CDS 812270 812947 . + 0 ID=.1708;gene=bioD;locus_tag=b0778;gene_synonym=ECK0767;gene_synonym=JW0761;ec_number=6.3.3.3;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Biotin;note=GO_process: GO:0009102 - biotin biosynthetic process;codon_start=1;transl_table=11;product=dethiobiotin synthetase;protein_id=AAC73865.1;db_xref=GI:1786995;db_xref=ASAP:ABE-0002650;db_xref=UniProtKB/Swiss-Prot:P13000;db_xref=EcoGene:EG10120 EMBL gene 813526 815547 . + . ID=.1709;gene=uvrB;locus_tag=b0779;gene_synonym=dar-1;gene_synonym=dar-6;gene_synonym=ECK0768;gene_synonym=JW0762;db_xref=EcoGene:EG11062 EMBL CDS 813526 815547 . + 0 ID=.1710;gene=uvrB;locus_tag=b0779;gene_synonym=dar-1;gene_synonym=dar-6;gene_synonym=ECK0768;gene_synonym=JW0762;function=enzyme%3B Degradation of DNA;note=DNA repair%3B excision nuclease subunit B%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006308 - DNA catabolic process%3B GO_process: GO:0006281 - DNA repair%3B GO_process: GO:0009314 - response to radiation%3B GO_process: GO:0009432 - SOS response;codon_start=1;transl_table=11;product=exision nuclease of nucleotide excision repair%2C DNA damage recognition component;protein_id=AAC73866.1;db_xref=GI:1786996;db_xref=ASAP:ABE-0002658;db_xref=UniProtKB/Swiss-Prot:P0A8F8;db_xref=EcoGene:EG11062 EMBL repeat_region 815585 815681 . + . ID=.1711;note=RIP73 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 815739 816647 . - . ID=.1712;gene=ybhK;locus_tag=b0780;gene_synonym=ECK0769;gene_synonym=JW0763;db_xref=EcoGene:EG13667 EMBL CDS 815739 816647 . - 0 ID=.1713;gene=ybhK;locus_tag=b0780;gene_synonym=ECK0769;gene_synonym=JW0763;function=putative structure%3B Not classified;note=putative structural protein;codon_start=1;transl_table=11;product=putative CofD superfamily transferase;protein_id=AAC73867.1;db_xref=GI:1786997;db_xref=ASAP:ABE-0002661;db_xref=UniProtKB/Swiss-Prot:P75767;db_xref=EcoGene:EG13667 EMBL gene 817044 818033 . + . ID=.1714;gene=moaA;locus_tag=b0781;gene_synonym=bisA;gene_synonym=chlA;gene_synonym=ECK0770;gene_synonym=JW0764;gene_synonym=narA;db_xref=EcoGene:EG11595 EMBL CDS 817044 818033 . + 0 ID=.1715;gene=moaA;locus_tag=b0781;gene_synonym=bisA;gene_synonym=chlA;gene_synonym=ECK0770;gene_synonym=JW0764;gene_synonym=narA;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Molybdopterin;experiment=N-terminus verified by Edman degradation: PMID 8361352;note=molybdopterin biosynthesis%2C protein A%3B GO_process: GO:0006777 - Mo-molybdopterin cofactor biosynthetic process;codon_start=1;transl_table=11;product=molybdopterin biosynthesis protein A;protein_id=AAC73868.1;db_xref=GI:1786999;db_xref=ASAP:ABE-0002669;db_xref=UniProtKB/Swiss-Prot:P30745;db_xref=EcoGene:EG11595 EMBL gene 818055 818567 . + . ID=.1716;gene=moaB;locus_tag=b0782;gene_synonym=ECK0771;gene_synonym=JW0765;db_xref=EcoGene:EG11596 EMBL CDS 818055 818567 . + 0 ID=.1717;gene=moaB;locus_tag=b0782;gene_synonym=ECK0771;gene_synonym=JW0765;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Molybdopterin;note=moaB is not required for molybdopterin biosynthesis%3B GO_process: GO:0006777 - Mo-molybdopterin cofactor biosynthetic process;codon_start=1;transl_table=11;product=inactive molybdopterin adenylyltransferase;protein_id=AAC73869.1;db_xref=GI:1787000;db_xref=ASAP:ABE-0002671;db_xref=UniProtKB/Swiss-Prot:P0AEZ9;db_xref=EcoGene:EG11596 EMBL gene 818570 819055 . + . ID=.1718;gene=moaC;locus_tag=b0783;gene_synonym=ECK0772;gene_synonym=JW0766;db_xref=EcoGene:EG11666 EMBL CDS 818570 819055 . + 0 ID=.1719;gene=moaC;locus_tag=b0783;gene_synonym=ECK0772;gene_synonym=JW0766;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Molybdopterin;note=GO_process: GO:0006777 - Mo-molybdopterin cofactor biosynthetic process;codon_start=1;transl_table=11;product=molybdopterin biosynthesis%2C protein C;protein_id=AAC73870.1;db_xref=GI:1787001;db_xref=ASAP:ABE-0002673;db_xref=UniProtKB/Swiss-Prot:P0A738;db_xref=EcoGene:EG11666 EMBL gene 819048 819293 . + . ID=.1720;gene=moaD;locus_tag=b0784;gene_synonym=chlM;gene_synonym=ECK0773;gene_synonym=JW0767;db_xref=EcoGene:EG11597 EMBL CDS 819048 819293 . + 0 ID=.1721;gene=moaD;locus_tag=b0784;gene_synonym=chlM;gene_synonym=ECK0773;gene_synonym=JW0767;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Molybdopterin;experiment=N-terminus verified by Edman degradation: PMID 8514782;note=molybdopterin biosynthesis%3B GO_process: GO:0006777 - Mo-molybdopterin cofactor biosynthetic process;codon_start=1;transl_table=11;product=molybdopterin synthase%2C small subunit;protein_id=AAC73871.1;db_xref=GI:1787002;db_xref=ASAP:ABE-0002675;db_xref=UniProtKB/Swiss-Prot:P30748;db_xref=EcoGene:EG11597 EMBL gene 819295 819747 . + . ID=.1722;gene=moaE;locus_tag=b0785;gene_synonym=ECK0774;gene_synonym=JW0768;db_xref=EcoGene:EG11598 EMBL CDS 819295 819747 . + 0 ID=.1723;gene=moaE;locus_tag=b0785;gene_synonym=ECK0774;gene_synonym=JW0768;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Molybdopterin;note=molybdopterin converting factor%2C subunit 2%3B GO_process: GO:0006777 - Mo-molybdopterin cofactor biosynthetic process;codon_start=1;transl_table=11;product=molybdopterin synthase%2C large subunit;protein_id=AAC73872.1;db_xref=GI:1787003;db_xref=ASAP:ABE-0002678;db_xref=UniProtKB/Swiss-Prot:P30749;db_xref=EcoGene:EG11598 EMBL repeat_region 819758 819784 . + . ID=.1724;note=REP74 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 819884 820588 . + . ID=.1725;gene=ybhL;locus_tag=b0786;gene_synonym=aceP;gene_synonym=ECK0775;gene_synonym=JW0769;db_xref=EcoGene:EG13668 EMBL CDS 819884 820588 . + 0 ID=.1726;gene=ybhL;locus_tag=b0786;gene_synonym=aceP;gene_synonym=ECK0775;gene_synonym=JW0769;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative acetate transporter%3B BAX Inhibitor-1 family inner membrane protein;protein_id=AAC73873.1;db_xref=GI:1787004;db_xref=ASAP:ABE-0002685;db_xref=UniProtKB/Swiss-Prot:P0AAC4;db_xref=EcoGene:EG13668 EMBL gene 820793 821506 . + . ID=.1727;gene=ybhM;locus_tag=b0787;gene_synonym=ECK0776;gene_synonym=JW0770;db_xref=EcoGene:EG13669 EMBL CDS 820793 821506 . + 0 ID=.1728;gene=ybhM;locus_tag=b0787;gene_synonym=ECK0776;gene_synonym=JW0770;note=GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=BAX Inhibitor-1 family inner membrane protein;protein_id=AAC73874.1;db_xref=GI:1787005;db_xref=ASAP:ABE-0002688;db_xref=UniProtKB/Swiss-Prot:P75769;db_xref=EcoGene:EG13669 EMBL gene 821542 822498 . - . ID=.1729;gene=ybhN;locus_tag=b0788;gene_synonym=ECK0777;gene_synonym=JW0771;db_xref=EcoGene:EG13670 EMBL CDS 821542 822498 . - 0 ID=.1730;gene=ybhN;locus_tag=b0788;gene_synonym=ECK0777;gene_synonym=JW0771;codon_start=1;transl_table=11;product=UPF0104 family inner membrane protein;protein_id=AAC73875.1;db_xref=GI:1787006;db_xref=ASAP:ABE-0002690;db_xref=UniProtKB/Swiss-Prot:P75770;db_xref=EcoGene:EG13670 EMBL gene 822498 823739 . - . ID=.1731;gene=clsB;locus_tag=b0789;gene_synonym=ECK0778;gene_synonym=JW0772;gene_synonym=ybhO;db_xref=EcoGene:EG13671 EMBL CDS 822498 823739 . - 0 ID=.1732;gene=clsB;locus_tag=b0789;gene_synonym=ECK0778;gene_synonym=JW0772;gene_synonym=ybhO;ec_number=2.7.8.-;function=Enzyme%3B Macromolecule synthesis: Phospholipids;note=cardiolipin synthase activity%3B GO_process: GO:0008654 - phospholipid biosynthetic process;codon_start=1;transl_table=11;product=cardiolipin synthase 2;protein_id=AAC73876.1;db_xref=GI:1787007;db_xref=ASAP:ABE-0002692;db_xref=UniProtKB/Swiss-Prot:P0AA84;db_xref=EcoGene:EG13671 EMBL gene 823736 824497 . - . ID=.1733;gene=ybhP;locus_tag=b0790;gene_synonym=ECK0779;gene_synonym=JW0773;db_xref=EcoGene:EG13672 EMBL CDS 823736 824497 . - 0 ID=.1734;gene=ybhP;locus_tag=b0790;gene_synonym=ECK0779;gene_synonym=JW0773;note=GO_process: GO:0006308 - DNA catabolic process;codon_start=1;transl_table=11;product=endo/exonuclease/phosphatase family protein;protein_id=AAC73877.1;db_xref=GI:1787008;db_xref=ASAP:ABE-0002696;db_xref=UniProtKB/Swiss-Prot:P0AAW1;db_xref=EcoGene:EG13672 EMBL gene 824630 825040 . + . ID=.1735;gene=ybhQ;locus_tag=b0791;gene_synonym=ECK0780;gene_synonym=JW0774;db_xref=EcoGene:EG13673 EMBL CDS 824630 825040 . + 0 ID=.1736;gene=ybhQ;locus_tag=b0791;gene_synonym=ECK0780;gene_synonym=JW0774;codon_start=1;transl_table=11;product=inner membrane protein;protein_id=AAC73878.1;db_xref=GI:1787009;db_xref=ASAP:ABE-0002699;db_xref=UniProtKB/Swiss-Prot:P0AAW5;db_xref=EcoGene:EG13673 EMBL gene 825002 826108 . - . ID=.1737;gene=ybhR;locus_tag=b0792;gene_synonym=ECK0781;gene_synonym=JW5803;db_xref=EcoGene:EG13674 EMBL CDS 825002 826108 . - 0 ID=.1738;gene=ybhR;locus_tag=b0792;gene_synonym=ECK0781;gene_synonym=JW5803;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative ABC transporter permease;protein_id=AAC73879.1;db_xref=GI:1787010;db_xref=ASAP:ABE-0002701;db_xref=UniProtKB/Swiss-Prot:P0AFP9;db_xref=EcoGene:EG13674 EMBL gene 826119 827252 . - . ID=.1739;gene=ybhS;locus_tag=b0793;gene_synonym=ECK0782;gene_synonym=JW0777;db_xref=EcoGene:EG13675 EMBL CDS 826119 827252 . - 0 ID=.1740;gene=ybhS;locus_tag=b0793;gene_synonym=ECK0782;gene_synonym=JW0777;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative ABC transporter permease;protein_id=AAC73880.1;db_xref=GI:1787011;db_xref=ASAP:ABE-0002703;db_xref=UniProtKB/Swiss-Prot:P0AFQ2;db_xref=EcoGene:EG13675 EMBL gene 827245 828981 . - . ID=.1741;gene=ybhF;locus_tag=b0794;gene_synonym=ECK0783;gene_synonym=JW5104;db_xref=EcoGene:EG13314 EMBL CDS 827245 828981 . - 0 ID=.1742;gene=ybhF;locus_tag=b0794;gene_synonym=ECK0783;gene_synonym=JW5104;function=putative transport%3B Not classified;note=putative ATP-binding component of a transport system%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=putative ABC transporter ATPase;protein_id=AAC73881.2;db_xref=GI:87081782;db_xref=ASAP:ABE-0002707;db_xref=UniProtKB/Swiss-Prot:P0A9U1;db_xref=EcoGene:EG13314 EMBL gene 828974 829972 . - . ID=.1743;gene=ybhG;locus_tag=b0795;gene_synonym=ECK0784;gene_synonym=JW0779;db_xref=EcoGene:EG13315 EMBL CDS 828974 829972 . - 0 ID=.1744;gene=ybhG;locus_tag=b0795;gene_synonym=ECK0784;gene_synonym=JW0779;function=putative membrane%3B Not classified;note=putative membrane protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane;codon_start=1;transl_table=11;product=putative membrane fusion protein (MFP) component of efflux pump%2C membrane anchor;protein_id=AAC73882.1;db_xref=GI:1787013;db_xref=ASAP:ABE-0002709;db_xref=UniProtKB/Swiss-Prot:P75777;db_xref=EcoGene:EG13315 EMBL gene 829972 830643 . - . ID=.1745;gene=ybiH;locus_tag=b0796;gene_synonym=ECK0785;gene_synonym=JW0780;db_xref=EcoGene:EG12406 EMBL CDS 829972 830643 . - 0 ID=.1746;gene=ybiH;locus_tag=b0796;gene_synonym=ECK0785;gene_synonym=JW0780;function=putative regulator%3B Not classified;note=putative transcriptional regulator%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=DUF1956 domain-containing tetR family putative transcriptional regulator;protein_id=AAC73883.2;db_xref=GI:87081783;db_xref=ASAP:ABE-0002711;db_xref=UniProtKB/Swiss-Prot:P0ACU0;db_xref=EcoGene:EG12406 EMBL gene 830872 832236 . + . ID=.1747;gene=rhlE;locus_tag=b0797;gene_synonym=ECK0786;gene_synonym=JW0781;db_xref=EcoGene:EG11235 EMBL CDS 830872 832236 . + 0 ID=.1748;gene=rhlE;locus_tag=b0797;gene_synonym=ECK0786;gene_synonym=JW0781;function=putative enzyme%3B Not classified;note=putative ATP-dependent RNA helicase%3B GO_process: GO:0009451 - RNA modification;codon_start=1;transl_table=11;product=ATP-dependent RNA helicase;protein_id=AAC73884.1;db_xref=GI:1787016;db_xref=ASAP:ABE-0002719;db_xref=UniProtKB/Swiss-Prot:P25888;db_xref=EcoGene:EG11235 EMBL repeat_region 832289 832386 . + . ID=.1749;note=RIP75 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 832468 832950 . - . ID=.1750;gene=ybiA;locus_tag=b0798;gene_synonym=ECK0787;gene_synonym=JW0783;db_xref=EcoGene:EG11579 EMBL CDS 832468 832950 . - 0 ID=.1751;gene=ybiA;locus_tag=b0798;gene_synonym=ECK0787;gene_synonym=JW0783;codon_start=1;transl_table=11;product=DUF1768 family protein;protein_id=AAC73885.1;db_xref=GI:1787017;db_xref=ASAP:ABE-0002722;db_xref=UniProtKB/Swiss-Prot:P30176;db_xref=EcoGene:EG11579 EMBL gene 833070 835220 . + . ID=.1752;gene=dinG;locus_tag=b0799;gene_synonym=ECK0788;gene_synonym=JW0784;gene_synonym=rarB;db_xref=EcoGene:EG11357 EMBL CDS 833070 835220 . + 0 ID=.1753;gene=dinG;locus_tag=b0799;gene_synonym=ECK0788;gene_synonym=JW0784;gene_synonym=rarB;function=putative enzyme%3B DNA - replication%2C repair%2C restriction/modification;note=probably ATP-dependent helicase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006281 - DNA repair%3B GO_process: GO:0009432 - SOS response;codon_start=1;transl_table=11;product=ATP-dependent DNA helicase;protein_id=AAC73886.1;db_xref=GI:1787018;db_xref=ASAP:ABE-0002732;db_xref=UniProtKB/Swiss-Prot:P27296;db_xref=EcoGene:EG11357 EMBL gene 835248 836210 . + . ID=.1754;gene=ybiB;locus_tag=b0800;gene_synonym=ECK0789;gene_synonym=JW0785;db_xref=EcoGene:EG11580 EMBL CDS 835248 836210 . + 0 ID=.1755;gene=ybiB;locus_tag=b0800;gene_synonym=ECK0789;gene_synonym=JW0785;function=putative enzyme%3B Not classified;experiment=N-terminus verified by Edman degradation: PMID 17895580;note=putative enzyme;codon_start=1;transl_table=11;product=putative family 3 glycosyltransferase;protein_id=AAC73887.1;db_xref=GI:1787019;db_xref=ASAP:ABE-0002734;db_xref=UniProtKB/Swiss-Prot:P30177;db_xref=EcoGene:EG11580 EMBL repeat_region 836222 836245 . + . ID=.1756;note=REP76 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 836351 837436 . + . ID=.1757;gene=ybiC;locus_tag=b0801;gene_synonym=ECK0790;gene_synonym=JW0786;db_xref=EcoGene:EG11581 EMBL CDS 836351 837436 . + 0 ID=.1758;gene=ybiC;locus_tag=b0801;gene_synonym=ECK0790;gene_synonym=JW0786;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=putative dehydrogenase;protein_id=AAC73888.1;db_xref=GI:1787020;db_xref=ASAP:ABE-0002738;db_xref=UniProtKB/Swiss-Prot:P30178;db_xref=EcoGene:EG11581 EMBL repeat_region 837539 837661 . + . ID=.1759;note=REP77 (repetitive extragenic palindromic) element%3B contains 3 REP sequences EMBL gene 837665 837925 . - . ID=.1760;gene=ybiJ;locus_tag=b0802;gene_synonym=ECK0791;gene_synonym=JW0787;db_xref=EcoGene:EG12422 EMBL CDS 837665 837925 . - 0 ID=.1761;gene=ybiJ;locus_tag=b0802;gene_synonym=ECK0791;gene_synonym=JW0787;codon_start=1;transl_table=11;product=DUF1471 family putative periplasmic protein;protein_id=AAC73889.1;db_xref=GI:1787021;db_xref=ASAP:ABE-0002741;db_xref=UniProtKB/Swiss-Prot:P0AAX3;db_xref=EcoGene:EG12422 EMBL gene 838190 838456 . - . ID=.1762;gene=ybiI;locus_tag=b0803;gene_synonym=ECK0792;gene_synonym=JW0788;db_xref=EcoGene:EG12421 EMBL CDS 838190 838456 . - 0 ID=.1763;gene=ybiI;locus_tag=b0803;gene_synonym=ECK0792;gene_synonym=JW0788;codon_start=1;transl_table=11;product=DksA-type zinc finger protein;protein_id=AAC73890.1;db_xref=GI:1787022;db_xref=ASAP:ABE-0002744;db_xref=UniProtKB/Swiss-Prot:P41039;db_xref=EcoGene:EG12421 EMBL gene 838530 839207 . - . ID=.1764;gene=ybiX;locus_tag=b0804;gene_synonym=ECK0793;gene_synonym=JW5105;db_xref=EcoGene:EG13316 EMBL CDS 838530 839207 . - 0 ID=.1765;gene=ybiX;locus_tag=b0804;gene_synonym=ECK0793;gene_synonym=JW5105;function=putative enzyme%3B Not classified;note=putative enzyme;codon_start=1;transl_table=11;product=Fe(II)-dependent oxygenase superfamily protein;protein_id=AAC73891.2;db_xref=GI:87081784;db_xref=ASAP:ABE-0002746;db_xref=UniProtKB/Swiss-Prot:P75779;db_xref=EcoGene:EG13316 EMBL gene 839249 841531 . - . ID=.1766;gene=fiu;locus_tag=b0805;gene_synonym=ECK0794;gene_synonym=JW0790;gene_synonym=ybiL;db_xref=EcoGene:EG13317 EMBL CDS 839249 841531 . - 0 ID=.1767;gene=fiu;locus_tag=b0805;gene_synonym=ECK0794;gene_synonym=JW0790;gene_synonym=ybiL;function=membrane%3B Outer membrane constituents;note=ferric iron outer membrane transporter%2C TonB-dependent%3B siderophore receptor for ferri-dihydroxybenzoylserine%2C ferri-dihydroxybenzoate and other catecholate siderophores%3B surface receptor for colicins G%2C H%2C and E492%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane%3B GO_process: GO:0006826 - iron ion transport;codon_start=1;transl_table=11;product=catecholate siderophore receptor;protein_id=AAC73892.1;db_xref=GI:1787024;db_xref=ASAP:ABE-0002749;db_xref=UniProtKB/Swiss-Prot:P75780;db_xref=EcoGene:EG13317 EMBL gene 841796 842056 . - . ID=.1768;gene=mcbA;locus_tag=b0806;gene_synonym=ECK0795;gene_synonym=JW5106;gene_synonym=ybiM;db_xref=EcoGene:EG13318 EMBL CDS 841796 842056 . - 0 ID=.1769;gene=mcbA;locus_tag=b0806;gene_synonym=ECK0795;gene_synonym=JW5106;gene_synonym=ybiM;codon_start=1;transl_table=11;product=colanic acid mucoidy stimulation protein;protein_id=AAC73893.2;db_xref=GI:87081785;db_xref=ASAP:ABE-0002753;db_xref=UniProtKB/Swiss-Prot:P0AAX6;db_xref=EcoGene:EG13318 EMBL gene 842332 843258 . + . ID=.1770;gene=rlmF;locus_tag=b0807;gene_synonym=ECK0796;gene_synonym=JW5107;gene_synonym=ybiN;db_xref=EcoGene:EG13319 EMBL CDS 842332 843258 . + 0 ID=.1771;gene=rlmF;locus_tag=b0807;gene_synonym=ECK0796;gene_synonym=JW5107;gene_synonym=ybiN;function=enzyme%3B rRNA modification;codon_start=1;transl_table=11;product=23S rRNA m(6)A1618 methyltransferase%2C SAM-dependent;protein_id=AAC73894.2;db_xref=GI:87081786;db_xref=ASAP:ABE-0002757;db_xref=UniProtKB/Swiss-Prot:P75782;db_xref=EcoGene:EG13319 EMBL gene 843255 845480 . - . ID=.1772;gene=ybiO;locus_tag=b0808;gene_synonym=ECK0797;gene_synonym=JW5108;db_xref=EcoGene:EG13320 EMBL CDS 843255 845480 . - 0 ID=.1773;gene=ybiO;locus_tag=b0808;gene_synonym=ECK0797;gene_synonym=JW5108;function=putative transport%3B Not classified;note=putative transport protein;codon_start=1;transl_table=11;product=mechanosensitive channel protein%2C intermediate conductance;protein_id=AAC73895.2;db_xref=GI:87081787;db_xref=ASAP:ABE-0002760;db_xref=UniProtKB/Swiss-Prot:P75783;db_xref=EcoGene:EG13320 EMBL repeat_region 845631 845729 . + . ID=.1774;note=RIP78 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 845741 846463 . - . ID=.1775;gene=glnQ;locus_tag=b0809;gene_synonym=ECK0798;gene_synonym=JW0794;db_xref=EcoGene:EG10389 EMBL CDS 845741 846463 . - 0 ID=.1776;gene=glnQ;locus_tag=b0809;gene_synonym=ECK0798;gene_synonym=JW0794;function=transport%3B Transport of small molecules: Amino acids%2C amines;note=ATP-binding component of glutamine high-affinity transport system%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006542 - glutamine biosynthetic process;codon_start=1;transl_table=11;product=glutamine transporter subunit;protein_id=AAC73896.1;db_xref=GI:1787029;db_xref=ASAP:ABE-0002764;db_xref=UniProtKB/Swiss-Prot:P10346;db_xref=EcoGene:EG10389 EMBL gene 846460 847119 . - . ID=.1777;gene=glnP;locus_tag=b0810;gene_synonym=ECK0799;gene_synonym=JW0795;db_xref=EcoGene:EG10388 EMBL CDS 846460 847119 . - 0 ID=.1778;gene=glnP;locus_tag=b0810;gene_synonym=ECK0799;gene_synonym=JW0795;function=transport%3B Transport of small molecules: Amino acids%2C amines;note=glutamine high-affinity transport system%3B membrane component%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006542 - glutamine biosynthetic process;codon_start=1;transl_table=11;product=glutamine transporter subunit;protein_id=AAC73897.1;db_xref=GI:1787030;db_xref=ASAP:ABE-0002766;db_xref=UniProtKB/Swiss-Prot:P0AEQ6;db_xref=EcoGene:EG10388 EMBL gene 847258 848004 . - . ID=.1779;gene=glnH;locus_tag=b0811;gene_synonym=ECK0800;gene_synonym=JW0796;db_xref=EcoGene:EG10386 EMBL CDS 847258 848004 . - 0 ID=.1780;gene=glnH;locus_tag=b0811;gene_synonym=ECK0800;gene_synonym=JW0796;function=transport%3B Transport of small molecules: Amino acids%2C amines;note=periplasmic glutamine-binding protein%3B permease%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0006542 - glutamine biosynthetic process;codon_start=1;transl_table=11;product=glutamine transporter subunit;protein_id=AAC73898.1;db_xref=GI:1787031;db_xref=ASAP:ABE-0002771;db_xref=UniProtKB/Swiss-Prot:P0AEQ3;db_xref=EcoGene:EG10386 EMBL gene 848408 848911 . - . ID=.1781;gene=dps;locus_tag=b0812;gene_synonym=ECK0801;gene_synonym=JW0797;gene_synonym=pexB;gene_synonym=vtm;db_xref=EcoGene:EG11415 EMBL CDS 848408 848911 . - 0 ID=.1782;gene=dps;locus_tag=b0812;gene_synonym=ECK0801;gene_synonym=JW0797;gene_synonym=pexB;gene_synonym=vtm;function=regulator%3B Global regulatory functions;note=global regulator%2C starvation conditions%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0042594 - response to starvation;codon_start=1;transl_table=11;product=Fe-binding and storage protein%3B stress-inducible DNA-binding protein;protein_id=AAC73899.1;db_xref=GI:1787032;db_xref=ASAP:ABE-0002776;db_xref=UniProtKB/Swiss-Prot:P0ABT2;db_xref=EcoGene:EG11415 EMBL gene 849210 850097 . - . ID=.1783;gene=rhtA;locus_tag=b0813;gene_synonym=ECK0802;gene_synonym=JW0798;gene_synonym=ybiF;db_xref=EcoGene:EG12134 EMBL CDS 849210 850097 . - 0 ID=.1784;gene=rhtA;locus_tag=b0813;gene_synonym=ECK0802;gene_synonym=JW0798;gene_synonym=ybiF;function=putative membrane%3B Not classified;note=putative transmembrane subunit%3B GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=threonine and homoserine efflux system;protein_id=AAC73900.1;db_xref=GI:1787033;db_xref=ASAP:ABE-0002779;db_xref=UniProtKB/Swiss-Prot:P0AA67;db_xref=EcoGene:EG12134 EMBL gene 850450 850965 . + . ID=.1785;gene=ompX;locus_tag=b0814;gene_synonym=ECK0803;gene_synonym=JW0799;gene_synonym=ybiG;db_xref=EcoGene:EG12135 EMBL CDS 850450 850965 . + 0 ID=.1786;gene=ompX;locus_tag=b0814;gene_synonym=ECK0803;gene_synonym=JW0799;gene_synonym=ybiG;function=membrane%3B Outer membrane constituents;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane;codon_start=1;transl_table=11;product=outer membrane protein X;protein_id=AAC73901.1;db_xref=GI:1787034;db_xref=ASAP:ABE-0002784;db_xref=UniProtKB/Swiss-Prot:P0A917;db_xref=EcoGene:EG12135 EMBL gene 851014 852597 . - . ID=.1787;gene=opgE;locus_tag=b0815;gene_synonym=ECK0804;gene_synonym=JW0800;gene_synonym=ybiP;db_xref=EcoGene:EG13321 EMBL CDS 851014 852597 . - 0 ID=.1788;gene=opgE;locus_tag=b0815;gene_synonym=ECK0804;gene_synonym=JW0800;gene_synonym=ybiP;function=putative enzyme%3B Not classified;note=putative enzyme%3B GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=OPG biosynthetic transmembrane phosphoethanolamine transferase;protein_id=AAC73902.1;db_xref=GI:1787035;db_xref=ASAP:ABE-0002786;db_xref=UniProtKB/Swiss-Prot:P75785;db_xref=EcoGene:EG13321 EMBL gene 852869 852997 . - . ID=.1789;gene=mntS;locus_tag=b4705;gene_synonym=ECK4517;gene_synonym=rybA;db_xref=EcoGene:EG14500 EMBL CDS 852869 852997 . - 0 ID=.1790;gene=mntS;locus_tag=b4705;gene_synonym=ECK4517;gene_synonym=rybA;codon_start=1;transl_table=11;product=Mn(2)-response protein%2C MntR-repressed;protein_id=AHA50631.1;db_xref=GI:558095102;db_xref=UniProtKB/Swiss-Prot:P0DKB3;db_xref=EcoGene:EG14500 EMBL gene 853183 853650 . + . ID=.1791;gene=mntR;locus_tag=b0817;gene_synonym=ECK0807;gene_synonym=JW0801;gene_synonym=ybiQ;db_xref=EcoGene:EG13322 EMBL CDS 853183 853650 . + 0 ID=.1792;gene=mntR;locus_tag=b0817;gene_synonym=ECK0807;gene_synonym=JW0801;gene_synonym=ybiQ;function=regulator%3B Not classified;codon_start=1;transl_table=11;product=Mn(2+)-responsive manganese regulon transcriptional regulator;protein_id=AAC73904.1;db_xref=GI:1787038;db_xref=ASAP:ABE-0002793;db_xref=UniProtKB/Swiss-Prot:P0A9F1;db_xref=EcoGene:EG13322 EMBL gene 853647 854765 . + . ID=.1793;gene=ybiR;locus_tag=b0818;gene_synonym=ECK0808;gene_synonym=JW0802;db_xref=EcoGene:EG13323 EMBL CDS 853647 854765 . + 0 ID=.1794;gene=ybiR;locus_tag=b0818;gene_synonym=ECK0808;gene_synonym=JW0802;note=GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=putative transporter;protein_id=AAC73905.1;db_xref=GI:1787039;db_xref=ASAP:ABE-0002795;db_xref=UniProtKB/Swiss-Prot:P75788;db_xref=EcoGene:EG13323 EMBL gene 854824 855744 . - . ID=.1795;gene=ldtB;locus_tag=b0819;gene_synonym=ECK0809;gene_synonym=JW0803;gene_synonym=ybiS;db_xref=EcoGene:EG13324 EMBL CDS 854824 855744 . - 0 ID=.1796;gene=ldtB;locus_tag=b0819;gene_synonym=ECK0809;gene_synonym=JW0803;gene_synonym=ybiS;function=enzyme%3B Murein sacculus%2C peptidoglycan;codon_start=1;transl_table=11;product=L%2CD-transpeptidase linking Lpp to murein;protein_id=AAC73906.1;db_xref=GI:1787040;db_xref=ASAP:ABE-0002797;db_xref=UniProtKB/Swiss-Prot:P0AAX8;db_xref=EcoGene:EG13324 EMBL gene 855963 857555 . + . ID=.1797;gene=ybiT;locus_tag=b0820;gene_synonym=ECK0810;gene_synonym=JW0804;db_xref=EcoGene:EG13325 EMBL CDS 855963 857555 . + 0 ID=.1798;gene=ybiT;locus_tag=b0820;gene_synonym=ECK0810;gene_synonym=JW0804;function=putative factor%3B Not classified;note=putative ATP-binding component of a transport system%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=ABC-F family putative regulatory ATPase;protein_id=AAC73907.1;db_xref=GI:1787041;db_xref=ASAP:ABE-0002801;db_xref=UniProtKB/Swiss-Prot:P0A9U3;db_xref=EcoGene:EG13325 EMBL repeat_region 857616 857713 . + . ID=.1799;note=RIP79 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 857796 859061 . - . ID=.1800;gene=ybiU;locus_tag=b0821;gene_synonym=ECK0811;gene_synonym=JW0805;db_xref=EcoGene:EG13326 EMBL CDS 857796 859061 . - 0 ID=.1801;gene=ybiU;locus_tag=b0821;gene_synonym=ECK0811;gene_synonym=JW0805;codon_start=1;transl_table=11;product=DUF1479 family protein;protein_id=AAC73908.1;db_xref=GI:1787042;db_xref=ASAP:ABE-0002804;db_xref=UniProtKB/Swiss-Prot:P75791;db_xref=EcoGene:EG13326 EMBL gene 859213 860028 . - . ID=.1802;gene=ybiV;locus_tag=b0822;gene_synonym=ECK0812;gene_synonym=JW0806;gene_synonym=supH;db_xref=EcoGene:EG13327 EMBL CDS 859213 860028 . - 0 ID=.1803;gene=ybiV;locus_tag=b0822;gene_synonym=ECK0812;gene_synonym=JW0806;gene_synonym=supH;codon_start=1;transl_table=11;product=sugar phosphatase%3B fructose-1-P/ribose-5-P/glucose-6-P phosphatase;protein_id=AAC73909.1;db_xref=GI:1787043;db_xref=ASAP:ABE-0002807;db_xref=UniProtKB/Swiss-Prot:P75792;db_xref=EcoGene:EG13327 EMBL gene 860174 862606 . - . ID=.1804;gene=ybiW;locus_tag=b0823;gene_synonym=ECK0813;gene_synonym=JW0807;gene_synonym=pflF;db_xref=EcoGene:EG13328 EMBL CDS 860174 862606 . - 0 ID=.1805;gene=ybiW;locus_tag=b0823;gene_synonym=ECK0813;gene_synonym=JW0807;gene_synonym=pflF;function=putative enzyme%3B Not classified;note=GO_process: GO:0006113 - fermentation;codon_start=1;transl_table=11;product=putative pyruvate formate lyase;protein_id=AAC73910.1;db_xref=GI:1787044;db_xref=ASAP:ABE-0002810;db_xref=UniProtKB/Swiss-Prot:P75793;db_xref=EcoGene:EG13328 EMBL gene 862612 863511 . - . ID=.1806;gene=ybiY;locus_tag=b0824;gene_synonym=ECK0814;gene_synonym=JW0808;gene_synonym=pflE;db_xref=EcoGene:EG13470 EMBL CDS 862612 863511 . - 0 ID=.1807;gene=ybiY;locus_tag=b0824;gene_synonym=ECK0814;gene_synonym=JW0808;gene_synonym=pflE;function=putative enzyme%3B Not classified;note=GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=putative pyruvate formate lyase activating enzyme;protein_id=AAC73911.2;db_xref=GI:226510931;db_xref=ASAP:ABE-0002812;db_xref=UniProtKB/Swiss-Prot:P75794;db_xref=EcoGene:EG13470 EMBL gene 863642 864304 . + . ID=.1808;gene=fsaA;locus_tag=b0825;gene_synonym=ECK0815;gene_synonym=JW5109;gene_synonym=mipB;gene_synonym=ybiZ;db_xref=EcoGene:EG13471 EMBL CDS 863642 864304 . + 0 ID=.1809;gene=fsaA;locus_tag=b0825;gene_synonym=ECK0815;gene_synonym=JW5109;gene_synonym=mipB;gene_synonym=ybiZ;ec_number=4.1.2.-;experiment=N-terminus verified by Edman degradation: PMID 11120740;note=fructose-6-phosphate aldolase;codon_start=1;transl_table=11;product=fructose-6-phosphate aldolase 1;protein_id=AAC73912.2;db_xref=GI:87081788;db_xref=ASAP:ABE-0002818;db_xref=UniProtKB/Swiss-Prot:P78055;db_xref=EcoGene:EG13471 EMBL repeat_region 864333 864370 . + . ID=.1810;note=REP80 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 864380 865129 . - . ID=.1811;gene=moeB;locus_tag=b0826;gene_synonym=chlN;gene_synonym=ECK0816;gene_synonym=JW0810;db_xref=EcoGene:EG10154 EMBL CDS 864380 865129 . - 0 ID=.1812;gene=moeB;locus_tag=b0826;gene_synonym=chlN;gene_synonym=ECK0816;gene_synonym=JW0810;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Molybdopterin;note=molybdopterin biosynthesis%3B GO_process: GO:0006777 - Mo-molybdopterin cofactor biosynthetic process;codon_start=1;transl_table=11;product=molybdopterin synthase sulfurylase;protein_id=AAC73913.1;db_xref=GI:1787048;db_xref=ASAP:ABE-0002820;db_xref=UniProtKB/Swiss-Prot:P12282;db_xref=EcoGene:EG10154 EMBL gene 865129 866364 . - . ID=.1813;gene=moeA;locus_tag=b0827;gene_synonym=bisB;gene_synonym=chlE;gene_synonym=ECK0817;gene_synonym=JW0811;gene_synonym=narE;db_xref=EcoGene:EG10153 EMBL CDS 865129 866364 . - 0 ID=.1814;gene=moeA;locus_tag=b0827;gene_synonym=bisB;gene_synonym=chlE;gene_synonym=ECK0817;gene_synonym=JW0811;gene_synonym=narE;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Molybdopterin;note=molybdopterin biosynthesis%3B GO_process: GO:0006777 - Mo-molybdopterin cofactor biosynthetic process;codon_start=1;transl_table=11;product=molybdopterin molybdenumtransferase%3B molybdopterin biosynthesis protein;protein_id=AAC73914.1;db_xref=GI:1787049;db_xref=ASAP:ABE-0002823;db_xref=UniProtKB/Swiss-Prot:P12281;db_xref=EcoGene:EG10153 EMBL gene 866568 867533 . + . ID=.1815;gene=iaaA;locus_tag=b0828;gene_synonym=ECK0818;gene_synonym=JW0812;gene_synonym=spt;gene_synonym=ybiK;db_xref=EcoGene:EG12407 EMBL CDS 866568 867533 . + 0 ID=.1816;gene=iaaA;locus_tag=b0828;gene_synonym=ECK0818;gene_synonym=JW0812;gene_synonym=spt;gene_synonym=ybiK;ec_number=3.5.1.1;function=orf%3B Not classified;note=putative asparaginase%3B GO_process: GO:0009063 - cellular amino acid catabolic process;codon_start=1;transl_table=11;product=Isoaspartyl peptidase;protein_id=AAC73915.1;db_xref=GI:1787050;db_xref=ASAP:ABE-0002828;db_xref=UniProtKB/Swiss-Prot:P37595;db_xref=EcoGene:EG12407 EMBL gene 867520 869391 . + . ID=.1817;gene=gsiA;locus_tag=b0829;gene_synonym=ECK0819;gene_synonym=JW5897;gene_synonym=yliA;db_xref=EcoGene:EG13472 EMBL CDS 867520 869391 . + 0 ID=.1818;gene=gsiA;locus_tag=b0829;gene_synonym=ECK0819;gene_synonym=JW5897;gene_synonym=yliA;function=putative transport%3B Not classified;note=putative ATP-binding component of a transport system%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=glutathione ABC transporter ATPase;protein_id=AAC73916.2;db_xref=GI:145693107;db_xref=ASAP:ABE-0002830;db_xref=UniProtKB/Swiss-Prot:P75796;db_xref=EcoGene:EG13472 EMBL gene 869411 870949 . + . ID=.1819;gene=gsiB;locus_tag=b0830;gene_synonym=ECK0820;gene_synonym=JW5111;gene_synonym=yliB;db_xref=EcoGene:EG13473 EMBL CDS 869411 870949 . + 0 ID=.1820;gene=gsiB;locus_tag=b0830;gene_synonym=ECK0820;gene_synonym=JW5111;gene_synonym=yliB;function=putative transport%3B Not classified;note=putative transport protein%3B GO_component: GO:0042597 - periplasmic space;codon_start=1;transl_table=11;product=glutathione ABC transporter periplasmic binding protein;protein_id=AAC73917.1;db_xref=GI:1787052;db_xref=ASAP:ABE-0002832;db_xref=UniProtKB/Swiss-Prot:P75797;db_xref=EcoGene:EG13473 EMBL gene 870967 871887 . + . ID=.1821;gene=gsiC;locus_tag=b0831;gene_synonym=ECK0821;gene_synonym=JW0815;gene_synonym=yliC;db_xref=EcoGene:EG13474 EMBL CDS 870967 871887 . + 0 ID=.1822;gene=gsiC;locus_tag=b0831;gene_synonym=ECK0821;gene_synonym=JW0815;gene_synonym=yliC;function=putative transport%3B Not classified;note=putative transport system permease protein%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=glutathione ABC transporter permease;protein_id=AAC73918.1;db_xref=GI:1787053;db_xref=ASAP:ABE-0002834;db_xref=UniProtKB/Swiss-Prot:P75798;db_xref=EcoGene:EG13474 EMBL gene 871890 872801 . + . ID=.1823;gene=gsiD;locus_tag=b0832;gene_synonym=ECK0822;gene_synonym=JW0816;gene_synonym=yliD;db_xref=EcoGene:EG13475 EMBL CDS 871890 872801 . + 0 ID=.1824;gene=gsiD;locus_tag=b0832;gene_synonym=ECK0822;gene_synonym=JW0816;gene_synonym=yliD;function=putative transport%3B Not classified;note=putative transport system permease protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=glutathione ABC transporter permease;protein_id=AAC73919.1;db_xref=GI:1787054;db_xref=ASAP:ABE-0002836;db_xref=UniProtKB/Swiss-Prot:P75799;db_xref=EcoGene:EG13475 EMBL gene 872979 875327 . + . ID=.1825;gene=yliE;locus_tag=b0833;gene_synonym=ECK0823;gene_synonym=JW0817;db_xref=EcoGene:EG13476 EMBL CDS 872979 875327 . + 0 ID=.1826;gene=yliE;locus_tag=b0833;gene_synonym=ECK0823;gene_synonym=JW0817;codon_start=1;transl_table=11;product=putative membrane-anchored cyclic-di-GMP phosphodiesterase;protein_id=AAC73920.1;db_xref=GI:1787055;db_xref=ASAP:ABE-0002839;db_xref=UniProtKB/Swiss-Prot:P75800;db_xref=EcoGene:EG13476 EMBL gene 875335 876663 . + . ID=.1827;gene=yliF;locus_tag=b0834;gene_synonym=ECK0824;gene_synonym=JW0818;db_xref=EcoGene:EG13477 EMBL CDS 875335 876663 . + 0 ID=.1828;gene=yliF;locus_tag=b0834;gene_synonym=ECK0824;gene_synonym=JW0818;codon_start=1;transl_table=11;product=putative membrane-anchored diguanylate cyclase;protein_id=AAC73921.1;db_xref=GI:1787056;db_xref=ASAP:ABE-0002841;db_xref=UniProtKB/Swiss-Prot:P75801;db_xref=EcoGene:EG13477 EMBL gene 876710 878035 . - . ID=.1829;gene=rimO;locus_tag=b0835;gene_synonym=ECK0825;gene_synonym=JW0819;gene_synonym=yliG;db_xref=EcoGene:EG13478 EMBL CDS 876710 878035 . - 0 ID=.1830;gene=rimO;locus_tag=b0835;gene_synonym=ECK0825;gene_synonym=JW0819;gene_synonym=yliG;codon_start=1;transl_table=11;product=ribosomal protein S12 methylthiotransferase;protein_id=AAC73922.1;db_xref=GI:1787057;db_xref=ASAP:ABE-0002843;db_xref=UniProtKB/Swiss-Prot:P0AEI4;db_xref=EcoGene:EG13478 EMBL gene 878248 878631 . + . ID=.1831;gene=bssR;locus_tag=b0836;gene_synonym=ECK0826;gene_synonym=JW0820;gene_synonym=yliH;db_xref=EcoGene:EG13479 EMBL CDS 878248 878631 . + 0 ID=.1832;gene=bssR;locus_tag=b0836;gene_synonym=ECK0826;gene_synonym=JW0820;gene_synonym=yliH;function=putative factor%3B Not classified;note=putative receptor;codon_start=1;transl_table=11;product=repressor of biofilm formation by indole transport regulation;protein_id=AAC73923.1;db_xref=GI:1787059;db_xref=ASAP:ABE-0002849;db_xref=UniProtKB/Swiss-Prot:P0AAY1;db_xref=EcoGene:EG13479 EMBL gene 878742 879857 . + . ID=.1833;gene=yliI;locus_tag=b0837;gene_synonym=ECK0827;gene_synonym=JW0821;db_xref=EcoGene:EG13480 EMBL CDS 878742 879857 . + 0 ID=.1834;gene=yliI;locus_tag=b0837;gene_synonym=ECK0827;gene_synonym=JW0821;function=putative enzyme%3B Not classified;note=putative dehydrogenase;codon_start=1;transl_table=11;product=soluble aldose sugar dehydrogenase;protein_id=AAC73924.1;db_xref=GI:1787060;db_xref=ASAP:ABE-0002852;db_xref=UniProtKB/Swiss-Prot:P75804;db_xref=EcoGene:EG13480 EMBL gene 879854 880480 . - . ID=.1835;gene=gstB;locus_tag=b0838;gene_synonym=ECK0828;gene_synonym=JW0822;gene_synonym=yliJ;db_xref=EcoGene:EG13481 EMBL CDS 879854 880480 . - 0 ID=.1836;gene=gstB;locus_tag=b0838;gene_synonym=ECK0828;gene_synonym=JW0822;gene_synonym=yliJ;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Thioredoxin%2C glutaredoxin%2C glutathione;note=putative transferase;codon_start=1;transl_table=11;product=glutathione S-transferase;protein_id=AAC73925.2;db_xref=GI:87081789;db_xref=ASAP:ABE-0002855;db_xref=UniProtKB/Swiss-Prot:P0ACA7;db_xref=EcoGene:EG13481 EMBL gene 880727 881929 . + . ID=.1837;gene=dacC;locus_tag=b0839;gene_synonym=ECK0829;gene_synonym=JW0823;db_xref=EcoGene:EG10203 EMBL CDS 880727 881929 . + 0 ID=.1838;gene=dacC;locus_tag=b0839;gene_synonym=ECK0829;gene_synonym=JW0823;ec_number=3.4.16.4;function=enzyme%3B Murein sacculus%2C peptidoglycan;note=D-alanyl-D-alanine carboxypeptidase%3B penicillin-binding protein 6%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=D-alanyl-D-alanine carboxypeptidase%3B penicillin-binding protein 6a;protein_id=AAC73926.1;db_xref=GI:1787062;db_xref=ASAP:ABE-0002860;db_xref=UniProtKB/Swiss-Prot:P08506;db_xref=EcoGene:EG10203 EMBL repeat_region 881940 881966 . + . ID=.1839;note=REP81 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 881976 882734 . - . ID=.1840;gene=deoR;locus_tag=b0840;gene_synonym=ECK0830;gene_synonym=JW0824;gene_synonym=nucR;db_xref=EcoGene:EG10223 EMBL CDS 881976 882734 . - 0 ID=.1841;gene=deoR;locus_tag=b0840;gene_synonym=ECK0830;gene_synonym=JW0824;gene_synonym=nucR;function=regulator%3B Salvage of nucleosides and nucleotides;note=transcriptional repressor for deo operon%2C tsx%2C nupG%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=deoxyribose-5-phosphate-inducible deoxyribose operon transcriptional repressor%3B repressor of nupG and tsx;protein_id=AAC73927.1;db_xref=GI:1787063;db_xref=ASAP:ABE-0002862;db_xref=UniProtKB/Swiss-Prot:P0ACK5;db_xref=EcoGene:EG10223 EMBL gene 882792 883388 . - . ID=.1842;gene=ybjG;locus_tag=b0841;gene_synonym=bcrC;gene_synonym=ECK0831;gene_synonym=JW5112;db_xref=EcoGene:EG13676 EMBL CDS 882792 883388 . - 0 ID=.1843;gene=ybjG;locus_tag=b0841;gene_synonym=bcrC;gene_synonym=ECK0831;gene_synonym=JW5112;note=GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=undecaprenyl pyrophosphate phosphatase;protein_id=AAC73928.1;db_xref=GI:1787064;db_xref=ASAP:ABE-0002865;db_xref=UniProtKB/Swiss-Prot:P75806;db_xref=EcoGene:EG13676 EMBL gene 883673 884905 . + . ID=.1844;gene=mdfA;locus_tag=b0842;gene_synonym=cmlA;gene_synonym=cmr;gene_synonym=ECK0832;gene_synonym=JW0826;db_xref=EcoGene:EG13696 EMBL CDS 883673 884905 . + 0 ID=.1845;gene=mdfA;locus_tag=b0842;gene_synonym=cmlA;gene_synonym=cmr;gene_synonym=ECK0832;gene_synonym=JW0826;function=transport%3B Transport of small molecules: Other;note=proton motive force efflux pump%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=multidrug efflux system protein;protein_id=AAC73929.1;db_xref=GI:1787065;db_xref=ASAP:ABE-0002871;db_xref=UniProtKB/Swiss-Prot:P0AEY8;db_xref=EcoGene:EG13696 EMBL gene 884946 885230 . - . ID=.1846;gene=ybjH;locus_tag=b0843;gene_synonym=ECK0833;gene_synonym=JW0827;db_xref=EcoGene:EG13677 EMBL CDS 884946 885230 . - 0 ID=.1847;gene=ybjH;locus_tag=b0843;gene_synonym=ECK0833;gene_synonym=JW0827;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC73930.1;db_xref=GI:1787066;db_xref=ASAP:ABE-0002873;db_xref=UniProtKB/Swiss-Prot:P0AAY4;db_xref=EcoGene:EG13677 EMBL gene 885316 886131 . - . ID=.1848;gene=ybjI;locus_tag=b0844;gene_synonym=ECK0834;gene_synonym=JW5113;db_xref=EcoGene:EG13678 EMBL CDS 885316 886131 . - 0 ID=.1849;gene=ybjI;locus_tag=b0844;gene_synonym=ECK0834;gene_synonym=JW5113;ec_number=3.1.3.-;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Riboflavin;codon_start=1;transl_table=11;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase%3B pyrimidine phosphatase%3B riboflavin synthesis;protein_id=AAC73931.2;db_xref=GI:87081790;db_xref=ASAP:ABE-0002877;db_xref=UniProtKB/Swiss-Prot:P75809;db_xref=EcoGene:EG13678 EMBL gene 886131 887339 . - . ID=.1850;gene=ybjJ;locus_tag=b0845;gene_synonym=ECK0835;gene_synonym=JW0829;db_xref=EcoGene:EG13679 EMBL CDS 886131 887339 . - 0 ID=.1851;gene=ybjJ;locus_tag=b0845;gene_synonym=ECK0835;gene_synonym=JW0829;function=putative regulator%3B Not classified;note=putative DEOR-type transcriptional regulator;codon_start=1;transl_table=11;product=putative drug efflux MFS transporter%2C inner membrane protein;protein_id=AAC73932.1;db_xref=GI:1787068;db_xref=ASAP:ABE-0002880;db_xref=UniProtKB/Swiss-Prot:P75810;db_xref=EcoGene:EG13679 EMBL gene 887423 887959 . + . ID=.1852;gene=rcdA;locus_tag=b0846;gene_synonym=ECK0836;gene_synonym=JW5114;gene_synonym=rcdR;gene_synonym=ybjK;db_xref=EcoGene:EG13680 EMBL CDS 887423 887959 . + 0 ID=.1853;gene=rcdA;locus_tag=b0846;gene_synonym=ECK0836;gene_synonym=JW5114;gene_synonym=rcdR;gene_synonym=ybjK;function=putative regulator%3B Not classified;note=putative DEOR-type transcriptional regulator;codon_start=1;transl_table=11;product=transcriptional regulator of csgD and ybiJI%3B autoregulator;protein_id=AAC73933.1;db_xref=GI:1787069;db_xref=ASAP:ABE-0002885;db_xref=UniProtKB/Swiss-Prot:P75811;db_xref=EcoGene:EG13680 EMBL gene 887976 888054 . - . ID=.1854;gene=rybB;locus_tag=b4417;gene_synonym=ECK0837;gene_synonym=JWR0227;gene_synonym=p25;db_xref=EcoGene:EG31137 EMBL ncRNA 887976 888054 . - . ID=.1855;ncrna_class=antisense_RNA;gene=rybB;locus_tag=b4417;gene_synonym=ECK0837;gene_synonym=JWR0227;gene_synonym=p25;product=sRNA antisense regulator of ompC and ompW mRNA instability%2C Hfq-dependent;note=identified in a large scale screen;db_xref=ASAP:ABE-0047241;db_xref=EcoGene:EG31137 EMBL gene 888134 889819 . - . ID=.1856;gene=ybjL;locus_tag=b0847;gene_synonym=ECK0838;gene_synonym=JW0831;db_xref=EcoGene:EG13681 EMBL CDS 888134 889819 . - 0 ID=.1857;gene=ybjL;locus_tag=b0847;gene_synonym=ECK0838;gene_synonym=JW0831;function=putative transport%3B Not classified;note=putative transport protein;codon_start=1;transl_table=11;product=putative transporter;protein_id=AAC73934.1;db_xref=GI:1787071;db_xref=ASAP:ABE-0002887;db_xref=UniProtKB/Swiss-Prot:P60869;db_xref=EcoGene:EG13681 EMBL gene 890089 890466 . + . ID=.1858;gene=ybjM;locus_tag=b0848;gene_synonym=ECK0839;gene_synonym=JW0832;db_xref=EcoGene:EG13682 EMBL CDS 890089 890466 . + 0 ID=.1859;gene=ybjM;locus_tag=b0848;gene_synonym=ECK0839;gene_synonym=JW0832;codon_start=1;transl_table=11;product=inner membrane protein;protein_id=AAC73935.1;db_xref=GI:1787072;db_xref=ASAP:ABE-0002891;db_xref=UniProtKB/Swiss-Prot:P64439;db_xref=EcoGene:EG13682 EMBL gene 890496 890753 . - . ID=.1860;gene=grxA;locus_tag=b0849;gene_synonym=ECK0840;gene_synonym=grx;gene_synonym=JW0833;db_xref=EcoGene:EG10417 EMBL CDS 890496 890753 . - 0 ID=.1861;gene=grxA;locus_tag=b0849;gene_synonym=ECK0840;gene_synonym=grx;gene_synonym=JW0833;function=carrier%3B Biosynthesis of cofactors%2C carriers: Thioredoxin%2C glutaredoxin%2C glutathione;experiment=N-terminus verified by Edman degradation: PMID 6352262;note=glutaredoxin1 redox coenzyme for glutathione-dependent ribonucleotide reductase;codon_start=1;transl_table=11;product=glutaredoxin 1%2C redox coenzyme for ribonucleotide reductase (RNR1a);protein_id=AAC73936.1;db_xref=GI:1787073;db_xref=ASAP:ABE-0002893;db_xref=UniProtKB/Swiss-Prot:P68688;db_xref=EcoGene:EG10417 EMBL gene 890913 891200 . + . ID=.1862;gene=ybjC;locus_tag=b0850;gene_synonym=ECK0841;gene_synonym=JW0834;db_xref=EcoGene:EG12842 EMBL CDS 890913 891200 . + 0 ID=.1863;gene=ybjC;locus_tag=b0850;gene_synonym=ECK0841;gene_synonym=JW0834;codon_start=1;transl_table=11;product=DUF1418 family protein;protein_id=AAC73937.1;db_xref=GI:1787074;db_xref=ASAP:ABE-0002898;db_xref=UniProtKB/Swiss-Prot:P46119;db_xref=EcoGene:EG12842 EMBL gene 891184 891906 . + . ID=.1864;gene=nfsA;locus_tag=b0851;gene_synonym=ECK0842;gene_synonym=JW0835;gene_synonym=mda18;gene_synonym=mdaA;gene_synonym=snrA;gene_synonym=ybjB;db_xref=EcoGene:EG11261 EMBL CDS 891184 891906 . + 0 ID=.1865;gene=nfsA;locus_tag=b0851;gene_synonym=ECK0842;gene_synonym=JW0835;gene_synonym=mda18;gene_synonym=mdaA;gene_synonym=snrA;gene_synonym=ybjB;ec_number=1.-.-.-;function=phenotype%3B Not classified;note=GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=nitroreductase A%2C NADPH-dependent%2C FMN-dependent;protein_id=AAC73938.1;db_xref=GI:1787075;db_xref=ASAP:ABE-0002900;db_xref=UniProtKB/Swiss-Prot:P17117;db_xref=EcoGene:EG11261 EMBL gene 891967 892869 . + . ID=.1866;gene=rimK;locus_tag=b0852;gene_synonym=ECK0843;gene_synonym=JW0836;gene_synonym=nek;db_xref=EcoGene:EG10852 EMBL CDS 891967 892869 . + 0 ID=.1867;gene=rimK;locus_tag=b0852;gene_synonym=ECK0843;gene_synonym=JW0836;gene_synonym=nek;function=structural component%3B Ribosomes - maturation and modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0003735 - structural constituent of ribosome%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=ribosomal protein S6 modification protein;protein_id=AAC73939.1;db_xref=GI:1787076;db_xref=ASAP:ABE-0002903;db_xref=UniProtKB/Swiss-Prot:P0C0U4;db_xref=EcoGene:EG10852 EMBL gene 892957 893433 . + . ID=.1868;gene=ybjN;locus_tag=b0853;gene_synonym=ECK0844;gene_synonym=JW0837;db_xref=EcoGene:EG13683 EMBL CDS 892957 893433 . + 0 ID=.1869;gene=ybjN;locus_tag=b0853;gene_synonym=ECK0844;gene_synonym=JW0837;function=putative regulator%3B Not classified;note=putative sensory transduction regulator;codon_start=1;transl_table=11;product=negative regulator of motility%3B multicopy suppressor of coaA(Ts);protein_id=AAC73940.1;db_xref=GI:1787077;db_xref=ASAP:ABE-0002910;db_xref=UniProtKB/Swiss-Prot:P0AAY6;db_xref=EcoGene:EG13683 EMBL gene 893784 894896 . + . ID=.1870;gene=potF;locus_tag=b0854;gene_synonym=ECK0845;gene_synonym=JW0838;db_xref=EcoGene:EG11629 EMBL CDS 893784 894896 . + 0 ID=.1871;gene=potF;locus_tag=b0854;gene_synonym=ECK0845;gene_synonym=JW0838;function=transport%3B Transport of small molecules: Amino acids%2C amines;note=periplasmic putrescine-binding protein%3B permease protein%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0006596 - polyamine biosynthetic process%3B GO_process: GO:0009310 - amine catabolic process%3B GO_process: GO:0015847 - putrescine transport;codon_start=1;transl_table=11;product=putrescine ABC transporter periplasmic binding protein;protein_id=AAC73941.1;db_xref=GI:1787078;db_xref=ASAP:ABE-0002913;db_xref=UniProtKB/Swiss-Prot:P31133;db_xref=EcoGene:EG11629 EMBL gene 894991 896124 . + . ID=.1872;gene=potG;locus_tag=b0855;gene_synonym=ECK0846;gene_synonym=JW5818;db_xref=EcoGene:EG11630 EMBL CDS 894991 896124 . + 0 ID=.1873;gene=potG;locus_tag=b0855;gene_synonym=ECK0846;gene_synonym=JW5818;function=transport%3B Transport of small molecules: Amino acids%2C amines;note=ATP-binding component of putrescine transport system%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006596 - polyamine biosynthetic process%3B GO_process: GO:0009310 - amine catabolic process%3B GO_process: GO:0015847 - putrescine transport;codon_start=1;transl_table=11;product=putrescine ABC transporter ATPase;protein_id=AAC73942.2;db_xref=GI:87081791;db_xref=ASAP:ABE-0002915;db_xref=UniProtKB/Swiss-Prot:P31134;db_xref=EcoGene:EG11630 EMBL gene 896134 897087 . + . ID=.1874;gene=potH;locus_tag=b0856;gene_synonym=ECK0847;gene_synonym=JW0840;db_xref=EcoGene:EG11631 EMBL CDS 896134 897087 . + 0 ID=.1875;gene=potH;locus_tag=b0856;gene_synonym=ECK0847;gene_synonym=JW0840;function=transport%3B Transport of small molecules: Amino acids%2C amines;note=putrescine transport protein%3B permease%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006596 - polyamine biosynthetic process%3B GO_process: GO:0009310 - amine catabolic process%3B GO_process: GO:0015847 - putrescine transport;codon_start=1;transl_table=11;product=putrescine ABC transporter permease;protein_id=AAC73943.1;db_xref=GI:1787080;db_xref=ASAP:ABE-0002917;db_xref=UniProtKB/Swiss-Prot:P31135;db_xref=EcoGene:EG11631 EMBL gene 897084 897929 . + . ID=.1876;gene=potI;locus_tag=b0857;gene_synonym=ECK0848;gene_synonym=JW0841;db_xref=EcoGene:EG11632 EMBL CDS 897084 897929 . + 0 ID=.1877;gene=potI;locus_tag=b0857;gene_synonym=ECK0848;gene_synonym=JW0841;function=transport%3B Transport of small molecules: Amino acids%2C amines;note=putrescine transport protein%3B permease%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006596 - polyamine biosynthetic process%3B GO_process: GO:0009310 - amine catabolic process%3B GO_process: GO:0015847 - putrescine transport;codon_start=1;transl_table=11;product=putrescine ABC transporter permease;protein_id=AAC73944.1;db_xref=GI:1787081;db_xref=ASAP:ABE-0002919;db_xref=UniProtKB/Swiss-Prot:P0AFL1;db_xref=EcoGene:EG11632 EMBL gene 897989 898477 . + . ID=.1878;gene=ybjO;locus_tag=b0858;gene_synonym=ECK0849;gene_synonym=JW0842;db_xref=EcoGene:EG13684 EMBL CDS 897989 898477 . + 0 ID=.1879;gene=ybjO;locus_tag=b0858;gene_synonym=ECK0849;gene_synonym=JW0842;codon_start=1;transl_table=11;product=DUF2593 family inner membrane protein;protein_id=AAC73945.1;db_xref=GI:1787082;db_xref=ASAP:ABE-0002922;db_xref=UniProtKB/Swiss-Prot:P0AAZ0;db_xref=EcoGene:EG13684 EMBL gene 898518 899645 . + . ID=.1880;gene=rlmC;locus_tag=b0859;gene_synonym=ECK0850;gene_synonym=JW0843;gene_synonym=rumB;gene_synonym=ybjF;db_xref=EcoGene:EG13427 EMBL CDS 898518 899645 . + 0 ID=.1881;gene=rlmC;locus_tag=b0859;gene_synonym=ECK0850;gene_synonym=JW0843;gene_synonym=rumB;gene_synonym=ybjF;ec_number=2.1.1.-;function=enzyme%3B rRNA modification;note=putative enzyme%3B GO_process: GO:0009451 - RNA modification;codon_start=1;transl_table=11;product=23S rRNA m(5)U747 methyltransferase%2C SAM-dependent;protein_id=AAC73946.1;db_xref=GI:1787083;db_xref=ASAP:ABE-0002924;db_xref=UniProtKB/Swiss-Prot:P75817;db_xref=EcoGene:EG13427 EMBL repeat_region 899696 899793 . + . ID=.1882;note=RIP82 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 899844 900575 . - . ID=.1883;gene=artJ;locus_tag=b0860;gene_synonym=ECK0851;gene_synonym=JW0844;db_xref=EcoGene:EG11628 EMBL CDS 899844 900575 . - 0 ID=.1884;gene=artJ;locus_tag=b0860;gene_synonym=ECK0851;gene_synonym=JW0844;function=transport%3B Transport of small molecules: Amino acids%2C amines;note=arginine 3rd transport system periplasmic binding protein%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0006526 - arginine biosynthetic process;codon_start=1;transl_table=11;product=arginine ABC transporter periplasmic binding protein;protein_id=AAC73947.1;db_xref=GI:1787085;db_xref=ASAP:ABE-0002927;db_xref=UniProtKB/Swiss-Prot:P30860;db_xref=EcoGene:EG11628 EMBL repeat_region 900749 900835 . + . ID=.1885;note=REP83 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 900866 901534 . - . ID=.1886;gene=artM;locus_tag=b0861;gene_synonym=ECK0852;gene_synonym=JW0845;db_xref=EcoGene:EG11627 EMBL CDS 900866 901534 . - 0 ID=.1887;gene=artM;locus_tag=b0861;gene_synonym=ECK0852;gene_synonym=JW0845;function=transport%3B Transport of small molecules: Amino acids%2C amines;note=arginine 3rd transport system permease protein%3B membrane component of ABC superfamily%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006526 - arginine biosynthetic process%3B GO_process: GO:0009063 - cellular amino acid catabolic process;codon_start=1;transl_table=11;product=arginine ABC transporter permease;protein_id=AAC73948.1;db_xref=GI:1787086;db_xref=ASAP:ABE-0002931;db_xref=UniProtKB/Swiss-Prot:P0AE30;db_xref=EcoGene:EG11627 EMBL gene 901534 902250 . - . ID=.1888;gene=artQ;locus_tag=b0862;gene_synonym=ECK0853;gene_synonym=JW0846;db_xref=EcoGene:EG11626 EMBL CDS 901534 902250 . - 0 ID=.1889;gene=artQ;locus_tag=b0862;gene_synonym=ECK0853;gene_synonym=JW0846;function=transport%3B Transport of small molecules: Amino acids%2C amines;note=arginine 3rd transport system permease protein%3B membrane component of ABC superfamily%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006526 - arginine biosynthetic process;codon_start=1;transl_table=11;product=arginine ABC transporter permease;protein_id=AAC73949.1;db_xref=GI:1787087;db_xref=ASAP:ABE-0002933;db_xref=UniProtKB/Swiss-Prot:P0AE34;db_xref=EcoGene:EG11626 EMBL gene 902257 902988 . - . ID=.1890;gene=artI;locus_tag=b0863;gene_synonym=ECK0854;gene_synonym=JW0847;db_xref=EcoGene:EG11625 EMBL CDS 902257 902988 . - 0 ID=.1891;gene=artI;locus_tag=b0863;gene_synonym=ECK0854;gene_synonym=JW0847;function=transport%3B Transport of small molecules: Amino acids%2C amines;note=arginine 3rd transport system periplasmic binding protein%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0006542 - glutamine biosynthetic process;codon_start=1;transl_table=11;product=arginine transporter subunit;protein_id=AAC73950.1;db_xref=GI:1787088;db_xref=ASAP:ABE-0002937;db_xref=UniProtKB/Swiss-Prot:P30859;db_xref=EcoGene:EG11625 EMBL gene 903006 903734 . - . ID=.1892;gene=artP;locus_tag=b0864;gene_synonym=ECK0855;gene_synonym=JW0848;db_xref=EcoGene:EG11624 EMBL CDS 903006 903734 . - 0 ID=.1893;gene=artP;locus_tag=b0864;gene_synonym=ECK0855;gene_synonym=JW0848;function=transport%3B Transport of small molecules: Amino acids%2C amines;note=ATP-binding component of 3rd arginine transport system%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006526 - arginine biosynthetic process;codon_start=1;transl_table=11;product=arginine ABC transporter ATPase;protein_id=AAC73951.1;db_xref=GI:1787089;db_xref=ASAP:ABE-0002939;db_xref=UniProtKB/Swiss-Prot:P0AAF6;db_xref=EcoGene:EG11624 EMBL gene 903952 904467 . - . ID=.1894;gene=ybjP;locus_tag=b0865;gene_synonym=ECK0856;gene_synonym=JW0849;db_xref=EcoGene:EG13685 EMBL CDS 903952 904467 . - 0 ID=.1895;gene=ybjP;locus_tag=b0865;gene_synonym=ECK0856;gene_synonym=JW0849;function=putative enzyme%3B Not classified;note=putative lipoprotein;codon_start=1;transl_table=11;product=lipoprotein;protein_id=AAC73952.1;db_xref=GI:1787090;db_xref=ASAP:ABE-0002941;db_xref=UniProtKB/Swiss-Prot:P75818;db_xref=EcoGene:EG13685 EMBL gene 904593 904916 . + . ID=.1896;gene=ybjQ;locus_tag=b0866;gene_synonym=ECK0857;gene_synonym=JW0850;db_xref=EcoGene:EG13686 EMBL CDS 904593 904916 . + 0 ID=.1897;gene=ybjQ;locus_tag=b0866;gene_synonym=ECK0857;gene_synonym=JW0850;codon_start=1;transl_table=11;product=UPF0145 family protein;protein_id=AAC73953.1;db_xref=GI:1787091;db_xref=ASAP:ABE-0002945;db_xref=UniProtKB/Swiss-Prot:P0A8C1;db_xref=EcoGene:EG13686 EMBL gene 904913 905743 . + . ID=.1898;gene=amiD;locus_tag=b0867;gene_synonym=ECK0858;gene_synonym=JW0851;gene_synonym=ybjR;db_xref=EcoGene:EG13687 EMBL CDS 904913 905743 . + 0 ID=.1899;gene=amiD;locus_tag=b0867;gene_synonym=ECK0858;gene_synonym=JW0851;gene_synonym=ybjR;function=putative regulator%3B Not classified;codon_start=1;transl_table=11;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase%2C Zn-dependent%3B OM lipoprotein;protein_id=AAC73954.1;db_xref=GI:1787092;db_xref=ASAP:ABE-0002947;db_xref=UniProtKB/Swiss-Prot:P75820;db_xref=EcoGene:EG13687 EMBL gene 905740 906753 . - . ID=.1900;gene=ybjS;locus_tag=b0868;gene_synonym=ECK0859;gene_synonym=JW5819;db_xref=EcoGene:EG13688 EMBL CDS 905740 906753 . - 0 ID=.1901;gene=ybjS;locus_tag=b0868;gene_synonym=ECK0859;gene_synonym=JW5819;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=putative NAD(P)H-dependent oxidoreductase;protein_id=AAC73955.2;db_xref=GI:87081792;db_xref=ASAP:ABE-0002949;db_xref=UniProtKB/Swiss-Prot:P75821;db_xref=EcoGene:EG13688 EMBL gene 906852 908282 . - . ID=.1902;gene=ybjT;locus_tag=b0869;gene_synonym=ECK0860;gene_synonym=JW5116;db_xref=EcoGene:EG13689 EMBL CDS 906852 908282 . - 0 ID=.1903;gene=ybjT;locus_tag=b0869;gene_synonym=ECK0860;gene_synonym=JW5116;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=putative NAD-dependent oxidoreductase;protein_id=AAC73956.2;db_xref=GI:87081793;db_xref=ASAP:ABE-0002951;db_xref=UniProtKB/Swiss-Prot:P75822;db_xref=EcoGene:EG13689 EMBL gene 908293 909294 . - . ID=.1904;gene=ltaE;locus_tag=b0870;gene_synonym=ECK0861;gene_synonym=JW0854;gene_synonym=ltaA;gene_synonym=ybjU;db_xref=EcoGene:EG13690 EMBL CDS 908293 909294 . - 0 ID=.1905;gene=ltaE;locus_tag=b0870;gene_synonym=ECK0861;gene_synonym=JW0854;gene_synonym=ltaA;gene_synonym=ybjU;ec_number=4.1.2.5;function=putative enzyme%3B Not classified;experiment=N-terminus verified by Edman degradation: PMID 9692922;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006545 - glycine biosynthetic process;codon_start=1;transl_table=11;product=L-allo-threonine aldolase%2C PLP-dependent;protein_id=AAC73957.1;db_xref=GI:1787095;db_xref=ASAP:ABE-0002954;db_xref=UniProtKB/Swiss-Prot:P75823;db_xref=EcoGene:EG13690 EMBL gene 909331 911049 . - . ID=.1906;gene=poxB;locus_tag=b0871;gene_synonym=ECK0862;gene_synonym=JW0855;db_xref=EcoGene:EG10754 EMBL CDS 909331 911049 . - 0 ID=.1907;gene=poxB;locus_tag=b0871;gene_synonym=ECK0862;gene_synonym=JW0855;ec_number=1.2.5.1;function=enzyme%3B Degradation of small molecules: Carbon compounds;experiment=N-terminus verified by Edman degradation: PMID 3902830;note=pyruvate oxidase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0042867 - pyruvate catabolic process;codon_start=1;transl_table=11;product=pyruvate dehydrogenase%2C thiamine triphosphate-binding%2C FAD-binding;protein_id=AAC73958.1;db_xref=GI:1787096;db_xref=ASAP:ABE-0002958;db_xref=UniProtKB/Swiss-Prot:P07003;db_xref=EcoGene:EG10754 EMBL repeat_region 911147 911172 . + . ID=.1908;note=REP84 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 911182 912150 . - . ID=.1909;gene=hcr;locus_tag=b0872;gene_synonym=ECK0863;gene_synonym=JW5117;gene_synonym=ybjV;db_xref=EcoGene:EG13691 EMBL CDS 911182 912150 . - 0 ID=.1910;gene=hcr;locus_tag=b0872;gene_synonym=ECK0863;gene_synonym=JW5117;gene_synonym=ybjV;ec_number=1.-.-.-;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=HCP oxidoreductase%2C NADH-dependent;protein_id=AAC73959.1;db_xref=GI:1787098;db_xref=ASAP:ABE-0002960;db_xref=UniProtKB/Swiss-Prot:P75824;db_xref=EcoGene:EG13691 EMBL gene 912162 913814 . - . ID=.1911;gene=hcp;locus_tag=b0873;gene_synonym=ECK0864;gene_synonym=JW0857;gene_synonym=ybjW;db_xref=EcoGene:EG13692 EMBL CDS 912162 913814 . - 0 ID=.1912;gene=hcp;locus_tag=b0873;gene_synonym=ECK0864;gene_synonym=JW0857;gene_synonym=ybjW;function=orf%3B Not classified;codon_start=1;transl_table=11;product=hybrid-cluster [4Fe-2S-2O] subunit of anaerobic terminal reductases;protein_id=AAC73960.2;db_xref=GI:87081794;db_xref=ASAP:ABE-0002962;db_xref=UniProtKB/Swiss-Prot:P75825;db_xref=EcoGene:EG13692 EMBL gene 913958 914857 . - . ID=.1913;gene=ybjE;locus_tag=b0874;gene_synonym=ECK0865;gene_synonym=JW0858;db_xref=EcoGene:EG13426 EMBL CDS 913958 914857 . - 0 ID=.1914;gene=ybjE;locus_tag=b0874;gene_synonym=ECK0865;gene_synonym=JW0858;function=putative structure%3B Not classified;note=putative surface protein;codon_start=1;transl_table=11;product=putative transporter;protein_id=AAC73961.2;db_xref=GI:87081795;db_xref=ASAP:ABE-0002966;db_xref=UniProtKB/Swiss-Prot:P75826;db_xref=EcoGene:EG13426 EMBL gene 915352 916047 . - . ID=.1915;gene=aqpZ;locus_tag=b0875;gene_synonym=bniP;gene_synonym=ECK0866;gene_synonym=JW0859;db_xref=EcoGene:EG13270 EMBL CDS 915352 916047 . - 0 ID=.1916;gene=aqpZ;locus_tag=b0875;gene_synonym=bniP;gene_synonym=ECK0866;gene_synonym=JW0859;function=transport%3B Transport of small molecules: Other;note=transmembrane water channel%3B aquaporin Z%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006970 - response to osmotic stress;codon_start=1;transl_table=11;product=aquaporin Z;protein_id=AAC73962.1;db_xref=GI:1787101;db_xref=ASAP:ABE-0002976;db_xref=UniProtKB/Swiss-Prot:P60844;db_xref=EcoGene:EG13270 EMBL gene 916473 918131 . + . ID=.1917;gene=ybjD;locus_tag=b0876;gene_synonym=ECK0867;gene_synonym=JW0860;db_xref=EcoGene:EG13425 EMBL CDS 916473 918131 . + 0 ID=.1918;gene=ybjD;locus_tag=b0876;gene_synonym=ECK0867;gene_synonym=JW0860;codon_start=1;transl_table=11;product=putative OLD family ATP-dependent endonuclease%3B DUF2813 family protein;protein_id=AAC73963.1;db_xref=GI:1787102;db_xref=ASAP:ABE-0002980;db_xref=UniProtKB/Swiss-Prot:P75828;db_xref=EcoGene:EG13425 EMBL gene 918128 919120 . - . ID=.1919;gene=ybjX;locus_tag=b0877;gene_synonym=ECK0868;gene_synonym=JW0861;db_xref=EcoGene:EG13693 EMBL CDS 918128 919120 . - 0 ID=.1920;gene=ybjX;locus_tag=b0877;gene_synonym=ECK0868;gene_synonym=JW0861;function=putative enzyme%3B Not classified;note=putative enzyme;codon_start=1;transl_table=11;product=DUF535 family protein;protein_id=AAC73964.1;db_xref=GI:1787103;db_xref=ASAP:ABE-0002982;db_xref=UniProtKB/Swiss-Prot:P75829;db_xref=EcoGene:EG13693 EMBL gene 919235 920350 . + . ID=.1921;gene=macA;locus_tag=b0878;gene_synonym=ECK0869;gene_synonym=JW0862;gene_synonym=ybjY;db_xref=EcoGene:EG13694 EMBL CDS 919235 920350 . + 0 ID=.1922;gene=macA;locus_tag=b0878;gene_synonym=ECK0869;gene_synonym=JW0862;gene_synonym=ybjY;function=putative membrane%3B Not classified;experiment=N-terminus verified by Edman degradation: PMID 17214741;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=macrolide transporter membrane fusion protein (MFP) component;protein_id=AAC73965.2;db_xref=GI:87081796;db_xref=ASAP:ABE-0002986;db_xref=UniProtKB/Swiss-Prot:P75830;db_xref=EcoGene:EG13694 EMBL gene 920347 922293 . + . ID=.1923;gene=macB;locus_tag=b0879;gene_synonym=ECK0870;gene_synonym=JW0863;gene_synonym=ybjZ;db_xref=EcoGene:EG13695 EMBL CDS 920347 922293 . + 0 ID=.1924;gene=macB;locus_tag=b0879;gene_synonym=ECK0870;gene_synonym=JW0863;gene_synonym=ybjZ;function=putative transport%3B Not classified;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=macrolide ABC transporter peremase/ATPase;protein_id=AAC73966.1;db_xref=GI:1787105;db_xref=ASAP:ABE-0002989;db_xref=UniProtKB/Swiss-Prot:P75831;db_xref=EcoGene:EG13695 EMBL gene 922366 922590 . - . ID=.1925;gene=cspD;locus_tag=b0880;gene_synonym=cspH;gene_synonym=ECK0871;gene_synonym=JW0864;gene_synonym=ybjA;db_xref=EcoGene:EG11111 EMBL CDS 922366 922590 . - 0 ID=.1926;gene=cspD;locus_tag=b0880;gene_synonym=cspH;gene_synonym=ECK0871;gene_synonym=JW0864;gene_synonym=ybjA;function=phenotype%3B Not classified;experiment=N-terminus verified by Edman degradation: PMID 9868784;note=stress induced DNA replication inhibitor%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=inhibitor of DNA replication%2C cold shock protein homolog;protein_id=AAC73967.1;db_xref=GI:1787107;db_xref=ASAP:ABE-0002991;db_xref=UniProtKB/Swiss-Prot:P0A968;db_xref=EcoGene:EG11111 EMBL gene 922913 923233 . + . ID=.1927;gene=clpS;locus_tag=b0881;gene_synonym=ECK0872;gene_synonym=JW0865;gene_synonym=yljA;db_xref=EcoGene:EG14241 EMBL CDS 922913 923233 . + 0 ID=.1928;gene=clpS;locus_tag=b0881;gene_synonym=ECK0872;gene_synonym=JW0865;gene_synonym=yljA;codon_start=1;transl_table=11;product=regulatory protein for ClpA substrate specificity;protein_id=AAC73968.1;db_xref=GI:1787108;db_xref=ASAP:ABE-0002998;db_xref=UniProtKB/Swiss-Prot:P0A8Q6;db_xref=EcoGene:EG14241 EMBL gene 923264 925540 . + . ID=.1929;gene=clpA;locus_tag=b0882;gene_synonym=ECK0873;gene_synonym=JW0866;gene_synonym=lopD;db_xref=EcoGene:EG10156 EMBL CDS 923264 925540 . + 0 ID=.1930;gene=clpA;locus_tag=b0882;gene_synonym=ECK0873;gene_synonym=JW0866;gene_synonym=lopD;function=enzyme%3B Degradation of proteins%2C peptides%2C glyco;experiment=N-terminus verified by Edman degradation: PMID 3049606;note=ATP-binding component of serine protease%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine protease%2C chaperone activity;protein_id=AAC73969.1;db_xref=GI:1787109;db_xref=ASAP:ABE-0003001;db_xref=UniProtKB/Swiss-Prot:P0ABH9;db_xref=EcoGene:EG10156 EMBL gene 925884 925971 . - . ID=.1931;gene=serW;locus_tag=b0883;gene_synonym=ECK0874;gene_synonym=JWR0025;db_xref=EcoGene:EG30096 EMBL tRNA 925884 925971 . - . ID=.1932;gene=serW;locus_tag=b0883;gene_synonym=ECK0874;gene_synonym=JWR0025;product=tRNA-Ser;note=anticodon: GGA;db_xref=ASAP:ABE-0003003;db_xref=EcoGene:EG30096 EMBL gene 926225 926443 . - . ID=.1933;gene=infA;locus_tag=b0884;gene_synonym=bypA1;gene_synonym=ECK0875;gene_synonym=JW0867;db_xref=EcoGene:EG10504 EMBL CDS 926225 926443 . - 0 ID=.1934;gene=infA;locus_tag=b0884;gene_synonym=bypA1;gene_synonym=ECK0875;gene_synonym=JW0867;function=factor%3B Proteins - translation and modification;note=protein chain initiation factor IF-1%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=translation initiation factor IF-1;protein_id=AAC73970.1;db_xref=GI:1787110;db_xref=ASAP:ABE-0003005;db_xref=UniProtKB/Swiss-Prot:P69222;db_xref=EcoGene:EG10504 EMBL gene 926728 927432 . - . ID=.1935;gene=aat;locus_tag=b0885;gene_synonym=ECK0876;gene_synonym=JW0868;gene_synonym=ycaA;db_xref=EcoGene:EG11112 EMBL CDS 926728 927432 . - 0 ID=.1936;gene=aat;locus_tag=b0885;gene_synonym=ECK0876;gene_synonym=JW0868;gene_synonym=ycaA;ec_number=2.3.2.6;function=enzyme%3B Aminoacyl tRNA synthetases%2C tRNA modification;note=leucyl%2C phenylalanyl-tRNA-protein transferase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006508 - proteolysis;codon_start=1;transl_table=11;product=leucyl/phenylalanyl-tRNA-protein transferase;protein_id=AAC73971.1;db_xref=GI:1787111;db_xref=ASAP:ABE-0003009;db_xref=UniProtKB/Swiss-Prot:P0A8P1;db_xref=EcoGene:EG11112 EMBL gene 927474 929195 . - . ID=.1937;gene=cydC;locus_tag=b0886;gene_synonym=ECK0877;gene_synonym=JW0869;gene_synonym=mdrA;gene_synonym=mdrH;gene_synonym=surB;gene_synonym=ycaB;db_xref=EcoGene:EG10012 EMBL CDS 927474 929195 . - 0 ID=.1938;gene=cydC;locus_tag=b0886;gene_synonym=ECK0877;gene_synonym=JW0869;gene_synonym=mdrA;gene_synonym=mdrH;gene_synonym=surB;gene_synonym=ycaB;function=transport%3B Transport of small molecules: Other;note=ATP-binding component of cytochrome-related transport%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=glutathione/cysteine ABC transporter export permease/ATPase;protein_id=AAC73972.1;db_xref=GI:1787112;db_xref=ASAP:ABE-0003012;db_xref=UniProtKB/Swiss-Prot:P23886;db_xref=EcoGene:EG10012 EMBL gene 929196 930962 . - . ID=.1939;gene=cydD;locus_tag=b0887;gene_synonym=ECK0878;gene_synonym=htrD;gene_synonym=JW0870;db_xref=EcoGene:EG11405 EMBL CDS 929196 930962 . - 0 ID=.1940;gene=cydD;locus_tag=b0887;gene_synonym=ECK0878;gene_synonym=htrD;gene_synonym=JW0870;function=transport%3B Not classified;note=ATP-binding component of cytochrome-related transport%2C Zn sensitive%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=glutathione/cysteine ABC transporter export permease/ATPase;protein_id=AAC73973.1;db_xref=GI:1787113;db_xref=ASAP:ABE-0003015;db_xref=UniProtKB/Swiss-Prot:P29018;db_xref=EcoGene:EG11405 EMBL gene 931085 932050 . - . ID=.1941;gene=trxB;locus_tag=b0888;gene_synonym=ECK0879;gene_synonym=JW0871;db_xref=EcoGene:EG11032 EMBL CDS 931085 932050 . - 0 ID=.1942;gene=trxB;locus_tag=b0888;gene_synonym=ECK0879;gene_synonym=JW0871;ec_number=1.8.1.9;function=enzyme%3B 2'-Deoxyribonucleotide metabolism;note=thioredoxin reductase%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=thioredoxin reductase%2C FAD/NAD(P)-binding;protein_id=AAC73974.1;db_xref=GI:1787114;db_xref=ASAP:ABE-0003018;db_xref=UniProtKB/Swiss-Prot:P0A9P4;db_xref=EcoGene:EG11032 EMBL gene 932595 933089 . + . ID=.1943;gene=lrp;locus_tag=b0889;gene_synonym=alsB;gene_synonym=ECK0880;gene_synonym=ihb;gene_synonym=JW0872;gene_synonym=livR;gene_synonym=lrs;gene_synonym=lss;gene_synonym=lstR;gene_synonym=mbf;gene_synonym=oppI;gene_synonym=rblA;db_xref=EcoGene:EG10547 EMBL CDS 932595 933089 . + 0 ID=.1944;gene=lrp;locus_tag=b0889;gene_synonym=alsB;gene_synonym=ECK0880;gene_synonym=ihb;gene_synonym=JW0872;gene_synonym=livR;gene_synonym=lrs;gene_synonym=lss;gene_synonym=lstR;gene_synonym=mbf;gene_synonym=oppI;gene_synonym=rblA;function=regulator%3B Central intermediary metabolism: Pool%2C multipurpose conversions;note=regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0009098 - leucine biosynthetic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=leucine-responsive global transcriptional regulator;protein_id=AAC73975.1;db_xref=GI:1787116;db_xref=ASAP:ABE-0003023;db_xref=UniProtKB/Swiss-Prot:P0ACJ0;db_xref=EcoGene:EG10547 EMBL gene 933224 937213 . + . ID=.1945;gene=ftsK;locus_tag=b0890;gene_synonym=dinH;gene_synonym=ECK0881;gene_synonym=JW0873;db_xref=EcoGene:EG13226 EMBL CDS 933224 937213 . + 0 ID=.1946;gene=ftsK;locus_tag=b0890;gene_synonym=dinH;gene_synonym=ECK0881;gene_synonym=JW0873;function=phenotype%3B Cell division;note=cell division protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009432 - SOS response;codon_start=1;transl_table=11;product=DNA translocase at septal ring sorting daughter chromsomes;protein_id=AAC73976.1;db_xref=GI:1787117;db_xref=ASAP:ABE-0003027;db_xref=UniProtKB/Swiss-Prot:P46889;db_xref=EcoGene:EG13226 EMBL repeat_region 937224 937259 . + . ID=.1947;note=REP85 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 937372 937983 . + . ID=.1948;gene=lolA;locus_tag=b0891;gene_synonym=ECK0882;gene_synonym=JW0874;gene_synonym=lplA;gene_synonym=yzzV;db_xref=EcoGene:EG12684 EMBL CDS 937372 937983 . + 0 ID=.1949;gene=lolA;locus_tag=b0891;gene_synonym=ECK0882;gene_synonym=JW0874;gene_synonym=lplA;gene_synonym=yzzV;function=transport%3B Protein%2C peptide secretion;note=periplasmic protein effects translocation of lipoproteins from inner membrane to outer%3B GO_component: GO:0042597 - periplasmic space;codon_start=1;transl_table=11;product=lipoprotein chaperone;protein_id=AAC73977.2;db_xref=GI:145693108;db_xref=ASAP:ABE-0003031;db_xref=UniProtKB/Swiss-Prot:P61316;db_xref=EcoGene:EG12684 EMBL gene 937994 939337 . + . ID=.1950;gene=rarA;locus_tag=b0892;gene_synonym=ECK0883;gene_synonym=JW0875;gene_synonym=mgsA;gene_synonym=ycaJ;db_xref=EcoGene:EG12690 EMBL CDS 937994 939337 . + 0 ID=.1951;gene=rarA;locus_tag=b0892;gene_synonym=ECK0883;gene_synonym=JW0875;gene_synonym=mgsA;gene_synonym=ycaJ;function=putative enzyme%3B Not classified;note=putative polynucleotide enzyme;codon_start=1;transl_table=11;product=recombination intermediate processing DNA-dependent ATPase;protein_id=AAC73978.1;db_xref=GI:1787119;db_xref=ASAP:ABE-0003034;db_xref=UniProtKB/Swiss-Prot:P0AAZ4;db_xref=EcoGene:EG12690 EMBL gene 939428 940720 . + . ID=.1952;gene=serS;locus_tag=b0893;gene_synonym=ECK0884;gene_synonym=JW0876;db_xref=EcoGene:EG10947 EMBL CDS 939428 940720 . + 0 ID=.1953;gene=serS;locus_tag=b0893;gene_synonym=ECK0884;gene_synonym=JW0876;ec_number=6.1.1.11;function=enzyme%3B Aminoacyl tRNA synthetases%2C tRNA modification;note=serine tRNA synthetase%3B also charges selenocystein tRNA with serine%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006418 - tRNA aminoacylation for protein translation;codon_start=1;transl_table=11;product=seryl-tRNA synthetase;protein_id=AAC73979.1;db_xref=GI:1787120;db_xref=ASAP:ABE-0003038;db_xref=UniProtKB/Swiss-Prot:P0A8L1;db_xref=EcoGene:EG10947 EMBL gene 940959 943403 . + . ID=.1954;gene=dmsA;locus_tag=b0894;gene_synonym=ECK0885;gene_synonym=JW5118;db_xref=EcoGene:EG10232 EMBL CDS 940959 943403 . + 0 ID=.1955;gene=dmsA;locus_tag=b0894;gene_synonym=ECK0885;gene_synonym=JW5118;ec_number=1.8.99.-;function=enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;note=anaerobic dimethyl sulfoxide reductase subunit A%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=dimethyl sulfoxide reductase%2C anaerobic%2C subunit A;protein_id=AAC73980.2;db_xref=GI:87081797;db_xref=ASAP:ABE-0003044;db_xref=UniProtKB/Swiss-Prot:P18775;db_xref=EcoGene:EG10232 EMBL gene 943414 944031 . + . ID=.1956;gene=dmsB;locus_tag=b0895;gene_synonym=ECK0886;gene_synonym=JW0878;db_xref=EcoGene:EG10233 EMBL CDS 943414 944031 . + 0 ID=.1957;gene=dmsB;locus_tag=b0895;gene_synonym=ECK0886;gene_synonym=JW0878;ec_number=1.8.99.-;function=enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;note=anaerobic dimethyl sulfoxide reductase subunit B%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=dimethyl sulfoxide reductase%2C anaerobic%2C subunit B;protein_id=AAC73981.1;db_xref=GI:1787122;db_xref=ASAP:ABE-0003046;db_xref=UniProtKB/Swiss-Prot:P18776;db_xref=EcoGene:EG10233 EMBL gene 944033 944896 . + . ID=.1958;gene=dmsC;locus_tag=b0896;gene_synonym=ECK0887;gene_synonym=JW0879;db_xref=EcoGene:EG10234 EMBL CDS 944033 944896 . + 0 ID=.1959;gene=dmsC;locus_tag=b0896;gene_synonym=ECK0887;gene_synonym=JW0879;ec_number=1.8.99.-;function=enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;note=anaerobic dimethyl sulfoxide reductase subunit C%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=dimethyl sulfoxide reductase%2C anaerobic%2C subunit C;protein_id=AAC73982.1;db_xref=GI:1787123;db_xref=ASAP:ABE-0003048;db_xref=UniProtKB/Swiss-Prot:P18777;db_xref=EcoGene:EG10234 EMBL gene 944931 945557 . - . ID=.1960;gene=ycaC;locus_tag=b0897;gene_synonym=ECK0888;gene_synonym=JW0880;db_xref=EcoGene:EG11241 EMBL CDS 944931 945557 . - 0 ID=.1961;gene=ycaC;locus_tag=b0897;gene_synonym=ECK0888;gene_synonym=JW0880;experiment=N-terminus verified by Edman degradation: PMID 9782055;note=GO_process: GO:0009063 - cellular amino acid catabolic process;codon_start=1;transl_table=11;product=putative isochorismatase family hydrolase;protein_id=AAC73983.1;db_xref=GI:1787124;db_xref=ASAP:ABE-0003050;db_xref=UniProtKB/Swiss-Prot:P21367;db_xref=EcoGene:EG11241 EMBL gene 945871 947019 . + . ID=.1962;gene=ycaD;locus_tag=b0898;gene_synonym=ECK0889;gene_synonym=JW0881;db_xref=EcoGene:EG11242 EMBL CDS 945871 947019 . + 0 ID=.1963;gene=ycaD;locus_tag=b0898;gene_synonym=ECK0889;gene_synonym=JW0881;function=putative transport%3B Not classified;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative MFS transporter%2C inner membrane protein;protein_id=AAC73984.1;db_xref=GI:1787126;db_xref=ASAP:ABE-0003056;db_xref=UniProtKB/Swiss-Prot:P21503;db_xref=EcoGene:EG11242 EMBL gene 947229 948659 . + . ID=.1964;gene=ycaM;locus_tag=b0899;gene_synonym=ECK0890;gene_synonym=JW5119;db_xref=EcoGene:EG13697 EMBL CDS 947229 948659 . + 0 ID=.1965;gene=ycaM;locus_tag=b0899;gene_synonym=ECK0890;gene_synonym=JW5119;function=putative transport%3B Not classified;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative transporter;protein_id=AAC73985.2;db_xref=GI:87081798;db_xref=ASAP:ABE-0003058;db_xref=UniProtKB/Swiss-Prot:P75835;db_xref=EcoGene:EG13697 EMBL gene 948660 949568 . - . ID=.1966;gene=ycaN;locus_tag=b0900;gene_synonym=ECK0891;gene_synonym=JW0883;db_xref=EcoGene:EG13698 EMBL CDS 948660 949568 . - 0 ID=.1967;gene=ycaN;locus_tag=b0900;gene_synonym=ECK0891;gene_synonym=JW0883;function=putative regulator%3B Not classified;note=putative transcriptional regulator LYSR-type%3B GO_function: GO:0016563 - transcription activator activity%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=LysR family putative transcriptional regulator;protein_id=AAC73986.1;db_xref=GI:1787128;db_xref=ASAP:ABE-0003060;db_xref=UniProtKB/Swiss-Prot:P75836;db_xref=EcoGene:EG13698 EMBL gene 949668 950258 . + . ID=.1968;gene=ycaK;locus_tag=b0901;gene_synonym=ECK0892;gene_synonym=JW0884;db_xref=EcoGene:EG12702 EMBL CDS 949668 950258 . + 0 ID=.1969;gene=ycaK;locus_tag=b0901;gene_synonym=ECK0892;gene_synonym=JW0884;note=GO_function: GO:0009055 - electron carrier activity;codon_start=1;transl_table=11;product=putative NAD(P)H-dependent oxidoreductase;protein_id=AAC73987.1;db_xref=GI:1787129;db_xref=ASAP:ABE-0003065;db_xref=UniProtKB/Swiss-Prot:P43340;db_xref=EcoGene:EG12702 EMBL gene 950340 951080 . - . ID=.1970;gene=pflA;locus_tag=b0902;gene_synonym=act;gene_synonym=ECK0893;gene_synonym=JW0885;db_xref=EcoGene:EG10028 EMBL CDS 950340 951080 . - 0 ID=.1971;gene=pflA;locus_tag=b0902;gene_synonym=act;gene_synonym=ECK0893;gene_synonym=JW0885;ec_number=1.97.1.4;function=enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=pyruvate formate-lyase 1-activating enzyme%3B [formate-C-acetyltransferase 1]-activating enzyme%3B PFL activase;protein_id=AAC73988.1;db_xref=GI:1787130;db_xref=ASAP:ABE-0003068;db_xref=UniProtKB/Swiss-Prot:P0A9N4;db_xref=EcoGene:EG10028 EMBL gene 951272 953554 . - . ID=.1972;gene=pflB;locus_tag=b0903;gene_synonym=ECK0894;gene_synonym=JW0886;gene_synonym=pfl;db_xref=EcoGene:EG10701 EMBL CDS 951272 953554 . - 0 ID=.1973;gene=pflB;locus_tag=b0903;gene_synonym=ECK0894;gene_synonym=JW0886;gene_synonym=pfl;ec_number=2.3.1.54;function=enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;note=formate acetyltransferase 1%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0009063 - cellular amino acid catabolic process;codon_start=1;transl_table=11;product=formate C-acetyltransferase 1%2C anaerobic%3B pyruvate formate-lyase 1;protein_id=AAC73989.1;db_xref=GI:1787131;db_xref=ASAP:ABE-0003071;db_xref=UniProtKB/Swiss-Prot:P09373;db_xref=EcoGene:EG10701 EMBL gene 953609 954466 . - . ID=.1974;gene=focA;locus_tag=b0904;gene_synonym=ECK0895;gene_synonym=JW0887;gene_synonym=ycaE;db_xref=EcoGene:EG11258 EMBL CDS 953609 954466 . - 0 ID=.1975;gene=focA;locus_tag=b0904;gene_synonym=ECK0895;gene_synonym=JW0887;gene_synonym=ycaE;function=putative transport%3B Degradation of small molecules: Carbon compounds;note=probable formate transporter (formate channel 1)%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=formate channel;protein_id=AAC73990.1;db_xref=GI:1787132;db_xref=ASAP:ABE-0003073;db_xref=UniProtKB/Swiss-Prot:P0AC23;db_xref=EcoGene:EG11258 EMBL gene 954872 956632 . - . ID=.1976;gene=ycaO;locus_tag=b0905;gene_synonym=ECK0896;gene_synonym=JW0888;db_xref=EcoGene:EG13699 EMBL CDS 954872 956632 . - 0 ID=.1977;gene=ycaO;locus_tag=b0905;gene_synonym=ECK0896;gene_synonym=JW0888;codon_start=1;transl_table=11;product=ribosomal protein S12 methylthiotransferase accessory factor;protein_id=AAC73991.2;db_xref=GI:87081799;db_xref=ASAP:ABE-0003081;db_xref=UniProtKB/Swiss-Prot:P75838;db_xref=EcoGene:EG13699 EMBL gene 956762 957454 . + . ID=.1978;gene=ycaP;locus_tag=b0906;gene_synonym=ECK0897;gene_synonym=JW0889;db_xref=EcoGene:EG13700 EMBL CDS 956762 957454 . + 0 ID=.1979;gene=ycaP;locus_tag=b0906;gene_synonym=ECK0897;gene_synonym=JW0889;codon_start=1;transl_table=11;product=UPF0702 family putative inner membrane protein;protein_id=AAC73992.1;db_xref=GI:1787135;db_xref=ASAP:ABE-0003089;db_xref=UniProtKB/Swiss-Prot:P75839;db_xref=EcoGene:EG13700 EMBL gene 957653 958741 . + . ID=.1980;gene=serC;locus_tag=b0907;gene_synonym=ECK0898;gene_synonym=JW0890;gene_synonym=pdxC;gene_synonym=pdxF;db_xref=EcoGene:EG10946 EMBL CDS 957653 958741 . + 0 ID=.1981;gene=serC;locus_tag=b0907;gene_synonym=ECK0898;gene_synonym=JW0890;gene_synonym=pdxC;gene_synonym=pdxF;ec_number=2.6.1.52;function=enzyme%3B Amino acid biosynthesis: Serine;note=3-phosphoserine aminotransferase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006564 - L-serine biosynthetic process;codon_start=1;transl_table=11;product=3-phosphoserine/phosphohydroxythreonine aminotransferase;protein_id=AAC73993.1;db_xref=GI:1787136;db_xref=ASAP:ABE-0003093;db_xref=UniProtKB/Swiss-Prot:P23721;db_xref=EcoGene:EG10946 EMBL gene 958812 960095 . + . ID=.1982;gene=aroA;locus_tag=b0908;gene_synonym=ECK0899;gene_synonym=JW0891;db_xref=EcoGene:EG10073 EMBL CDS 958812 960095 . + 0 ID=.1983;gene=aroA;locus_tag=b0908;gene_synonym=ECK0899;gene_synonym=JW0891;ec_number=2.5.1.19;function=enzyme%3B Amino acid biosynthesis: Chorismate;experiment=N-terminus verified by Edman degradation: PMID 3518706;note=GO_process: GO:0009423 - chorismate biosynthetic process;codon_start=1;transl_table=11;product=5-enolpyruvylshikimate-3-phosphate synthetase;protein_id=AAC73994.1;db_xref=GI:1787137;db_xref=ASAP:ABE-0003095;db_xref=UniProtKB/Swiss-Prot:P0A6D3;db_xref=EcoGene:EG10073 EMBL gene 960264 961028 . + . ID=.1984;gene=ycaL;locus_tag=b0909;gene_synonym=ECK0900;gene_synonym=JW0892;db_xref=EcoGene:EG13133 EMBL CDS 960264 961028 . + 0 ID=.1985;gene=ycaL;locus_tag=b0909;gene_synonym=ECK0900;gene_synonym=JW0892;function=putative factor%3B Not classified;note=putative heat shock protein%3B GO_process: GO:0009266 - response to temperature stimulus;codon_start=1;transl_table=11;product=putative peptidase-related chaperone;protein_id=AAC73995.2;db_xref=GI:87081800;db_xref=ASAP:ABE-0003098;db_xref=UniProtKB/Swiss-Prot:P43674;db_xref=EcoGene:EG13133 EMBL gene 961201 961884 . + . ID=.1986;gene=cmk;locus_tag=b0910;gene_synonym=ECK0901;gene_synonym=JW0893;gene_synonym=mssA;gene_synonym=ycaF;gene_synonym=ycaG;db_xref=EcoGene:EG11265 EMBL CDS 961201 961884 . + 0 ID=.1987;gene=cmk;locus_tag=b0910;gene_synonym=ECK0901;gene_synonym=JW0893;gene_synonym=mssA;gene_synonym=ycaF;gene_synonym=ycaG;ec_number=2.7.4.14;function=enzyme%3B Pyrimidine ribonucleotide biosynthesis;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion;codon_start=1;transl_table=11;product=cytidylate kinase;protein_id=AAC73996.1;db_xref=GI:1787139;db_xref=ASAP:ABE-0003101;db_xref=UniProtKB/Swiss-Prot:P0A6I0;db_xref=EcoGene:EG11265 EMBL gene 961995 963668 . + . ID=.1988;gene=rpsA;locus_tag=b0911;gene_synonym=ECK0902;gene_synonym=JW0894;gene_synonym=ssyF;db_xref=EcoGene:EG10900 EMBL CDS 961995 963668 . + 0 ID=.1989;gene=rpsA;locus_tag=b0911;gene_synonym=ECK0902;gene_synonym=JW0894;gene_synonym=ssyF;function=structural component%3B Ribosomal proteins - synthesis%2C modification;experiment=N-terminus verified by Edman degradation: PMID 7041110%2C7783627%2C9298646%2C9600841%2C11248028;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0003735 - structural constituent of ribosome%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=30S ribosomal subunit protein S1;protein_id=AAC73997.1;db_xref=GI:1787140;db_xref=ASAP:ABE-0003104;db_xref=UniProtKB/Swiss-Prot:P0AG67;db_xref=EcoGene:EG10900 EMBL gene 963828 964112 . + . ID=.1990;gene=ihfB;locus_tag=b0912;gene_synonym=ECK0903;gene_synonym=himD;gene_synonym=hip;gene_synonym=JW0895;db_xref=EcoGene:EG10441 EMBL CDS 963828 964112 . + 0 ID=.1991;gene=ihfB;locus_tag=b0912;gene_synonym=ECK0903;gene_synonym=himD;gene_synonym=hip;gene_synonym=JW0895;function=factor%3B DNA - replication%2C repair%2C restriction/modification;experiment=N-terminus verified by Edman degradation: PMID 9868784;note=integration host factor (IHF)%2C beta subunit%3B site-specific recombination%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006310 - DNA recombination;codon_start=1;transl_table=11;product=integration host factor (IHF)%2C DNA-binding protein%2C beta subunit;protein_id=AAC73998.1;db_xref=GI:1787141;db_xref=ASAP:ABE-0003107;db_xref=UniProtKB/Swiss-Prot:P0A6Y1;db_xref=EcoGene:EG10441 EMBL gene 964320 966584 . + . ID=.1992;gene=ycaI;locus_tag=b0913;gene_synonym=ECK0904;gene_synonym=JW5120;db_xref=EcoGene:EG12375 EMBL CDS 964320 966584 . + 0 ID=.1993;gene=ycaI;locus_tag=b0913;gene_synonym=ECK0904;gene_synonym=JW5120;codon_start=1;transl_table=11;product=ComEC family inner membrane protein;protein_id=AAC73999.2;db_xref=GI:87081801;db_xref=ASAP:ABE-0003111;db_xref=UniProtKB/Swiss-Prot:P37443;db_xref=EcoGene:EG12375 EMBL gene 966621 968369 . + . ID=.1994;gene=msbA;locus_tag=b0914;gene_synonym=ECK0905;gene_synonym=JW0897;db_xref=EcoGene:EG10613 EMBL CDS 966621 968369 . + 0 ID=.1995;gene=msbA;locus_tag=b0914;gene_synonym=ECK0905;gene_synonym=JW0897;function=transport%3B Transport of small molecules: Other;note=ATP-binding transport protein%3B multicopy suppressor of htrB%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=lipid ABC transporter permease/ATPase;protein_id=AAC74000.1;db_xref=GI:1787143;db_xref=ASAP:ABE-0003113;db_xref=UniProtKB/Swiss-Prot:P60752;db_xref=EcoGene:EG10613 EMBL gene 968366 969352 . + . ID=.1996;gene=lpxK;locus_tag=b0915;gene_synonym=ECK0906;gene_synonym=JW0898;gene_synonym=ycaH;db_xref=EcoGene:EG11409 EMBL CDS 968366 969352 . + 0 ID=.1997;gene=lpxK;locus_tag=b0915;gene_synonym=ECK0906;gene_synonym=JW0898;gene_synonym=ycaH;ec_number=2.7.1.130;function=putative enzyme%3B Not classified;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0009244 - lipopolysaccharide core region biosynthetic process%3B GO_process: GO:0009245 - lipid A biosynthetic process%3B GO_process: GO:0009248 - K antigen biosynthetic process;codon_start=1;transl_table=11;product=lipid A 4'kinase;protein_id=AAC74001.1;db_xref=GI:1787144;db_xref=ASAP:ABE-0003115;db_xref=UniProtKB/Swiss-Prot:P27300;db_xref=EcoGene:EG11409 EMBL gene 969389 970621 . + . ID=.1998;gene=ycaQ;locus_tag=b0916;gene_synonym=ECK0907;gene_synonym=JW0899;db_xref=EcoGene:EG13701 EMBL CDS 969389 970621 . + 0 ID=.1999;gene=ycaQ;locus_tag=b0916;gene_synonym=ECK0907;gene_synonym=JW0899;codon_start=1;transl_table=11;product=DUF1006 family protein with C-terminal wHTH domain;protein_id=AAC74002.1;db_xref=GI:1787145;db_xref=ASAP:ABE-0003117;db_xref=UniProtKB/Swiss-Prot:P75843;db_xref=EcoGene:EG13701 EMBL gene 970673 970855 . + . ID=.2000;gene=ycaR;locus_tag=b0917;gene_synonym=ECK0908;gene_synonym=JW0900;db_xref=EcoGene:EG14287 EMBL CDS 970673 970855 . + 0 ID=.2001;gene=ycaR;locus_tag=b0917;gene_synonym=ECK0908;gene_synonym=JW0900;codon_start=1;transl_table=11;product=peroxide and acid resistance protein%2C UPF0434 family;protein_id=AAC74003.1;db_xref=GI:1787146;db_xref=ASAP:ABE-0003120;db_xref=UniProtKB/Swiss-Prot:P0AAZ7;db_xref=EcoGene:EG14287 EMBL gene 970852 971598 . + . ID=.2002;gene=kdsB;locus_tag=b0918;gene_synonym=ECK0909;gene_synonym=JW0901;db_xref=EcoGene:EG10519 EMBL CDS 970852 971598 . + 0 ID=.2003;gene=kdsB;locus_tag=b0918;gene_synonym=ECK0909;gene_synonym=JW0901;ec_number=2.7.7.38;function=enzyme%3B Surface polysaccharides %26 antigens;note=CTP:CMP-3-deoxy-D-manno-octulosonate transferase%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0009244 - lipopolysaccharide core region biosynthetic process%3B GO_process: GO:0009245 - lipid A biosynthetic process%3B GO_process: GO:0009248 - K antigen biosynthetic process;codon_start=1;transl_table=11;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=AAC74004.1;db_xref=GI:1787147;db_xref=ASAP:ABE-0003122;db_xref=UniProtKB/Swiss-Prot:P04951;db_xref=EcoGene:EG10519 EMBL gene 971752 972645 . + . ID=.2004;gene=ycbJ;locus_tag=b0919;gene_synonym=ECK0910;gene_synonym=JW0902;db_xref=EcoGene:EG13702 EMBL CDS 971752 972645 . + 0 ID=.2005;gene=ycbJ;locus_tag=b0919;gene_synonym=ECK0910;gene_synonym=JW0902;codon_start=1;transl_table=11;product=protein kinase-like domain protein;protein_id=AAC74005.1;db_xref=GI:1787149;db_xref=ASAP:ABE-0003125;db_xref=UniProtKB/Swiss-Prot:P0AB03;db_xref=EcoGene:EG13702 EMBL gene 972622 973401 . - . ID=.2006;gene=elyC;locus_tag=b0920;gene_synonym=ECK0911;gene_synonym=JW0903;gene_synonym=ycbC;db_xref=EcoGene:EG12166 EMBL CDS 972622 973401 . - 0 ID=.2007;gene=elyC;locus_tag=b0920;gene_synonym=ECK0911;gene_synonym=JW0903;gene_synonym=ycbC;function=factor%3B Murein sacculus%2C peptidoglycan;codon_start=1;transl_table=11;product=envelope biogenesis factor%3B DUF218 superfamily protein;protein_id=AAC74006.1;db_xref=GI:1787150;db_xref=ASAP:ABE-0003127;db_xref=UniProtKB/Swiss-Prot:P0AB01;db_xref=EcoGene:EG12166 EMBL gene 973537 974322 . + . ID=.2008;gene=smtA;locus_tag=b0921;gene_synonym=ECK0912;gene_synonym=JW0904;gene_synonym=ycbD;db_xref=EcoGene:EG12167 EMBL CDS 973537 974322 . + 0 ID=.2009;gene=smtA;locus_tag=b0921;gene_synonym=ECK0912;gene_synonym=JW0904;gene_synonym=ycbD;function=enzyme%3B Central intermediary metabolism: Pool%2C multipurpose conversions;note=S-adenosylmethionine-dependent methyltransferase%3B GO_process: GO:0006071 - glycerol metabolic process;codon_start=1;transl_table=11;product=putative S-adenosyl-L-methionine-dependent methyltransferase;protein_id=AAC74007.1;db_xref=GI:1787151;db_xref=ASAP:ABE-0003131;db_xref=UniProtKB/Swiss-Prot:P36566;db_xref=EcoGene:EG12167 EMBL gene 974319 975641 . + . ID=.2010;gene=mukF;locus_tag=b0922;gene_synonym=ECK0913;gene_synonym=JW0905;gene_synonym=kicB;db_xref=EcoGene:EG12165 EMBL CDS 974319 975641 . + 0 ID=.2011;gene=mukF;locus_tag=b0922;gene_synonym=ECK0913;gene_synonym=JW0905;gene_synonym=kicB;function=factor%3B Cell killing;note=mukF protein (killing factor KICB);codon_start=1;transl_table=11;product=chromosome condensin MukBEF%2C kleisin-like subunit%2C binds calcium;protein_id=AAC74008.1;db_xref=GI:1787152;db_xref=ASAP:ABE-0003134;db_xref=UniProtKB/Swiss-Prot:P60293;db_xref=EcoGene:EG12165 EMBL gene 975622 976326 . + . ID=.2012;gene=mukE;locus_tag=b0923;gene_synonym=ECK0914;gene_synonym=JW0906;gene_synonym=kicA;gene_synonym=ycbA;db_xref=EcoGene:EG11252 EMBL CDS 975622 976326 . + 0 ID=.2013;gene=mukE;locus_tag=b0923;gene_synonym=ECK0914;gene_synonym=JW0906;gene_synonym=kicA;gene_synonym=ycbA;codon_start=1;transl_table=11;product=chromosome condensin MukBEF%2C MukE localization factor;protein_id=AAC74009.2;db_xref=GI:226510932;db_xref=ASAP:ABE-0003136;db_xref=UniProtKB/Swiss-Prot:P22524;db_xref=EcoGene:EG11252 EMBL gene 976326 980786 . + . ID=.2014;gene=mukB;locus_tag=b0924;gene_synonym=ECK0915;gene_synonym=JW0907;db_xref=EcoGene:EG10618 EMBL CDS 976326 980786 . + 0 ID=.2015;gene=mukB;locus_tag=b0924;gene_synonym=ECK0915;gene_synonym=JW0907;function=structural component%3B Cell division;experiment=N-terminus verified by Edman degradation: PMID 1464330;note=kinesin-like cell division protein involved in chromosome partitioning;codon_start=1;transl_table=11;product=chromosome condensin MukBEF%2C ATPase and DNA-binding subunit;protein_id=AAC74010.1;db_xref=GI:1787154;db_xref=ASAP:ABE-0003138;db_xref=UniProtKB/Swiss-Prot:P22523;db_xref=EcoGene:EG10618 EMBL gene 981047 982894 . + . ID=.2016;gene=ldtD;locus_tag=b0925;gene_synonym=ECK0916;gene_synonym=JW0908;gene_synonym=ycbB;db_xref=EcoGene:EG11253 EMBL CDS 981047 982894 . + 0 ID=.2017;gene=ldtD;locus_tag=b0925;gene_synonym=ECK0916;gene_synonym=JW0908;gene_synonym=ycbB;function=enzyme%3B Murein sacculus%2C peptidoglycan;note=putative amidase;codon_start=1;transl_table=11;product=murein L%2CD-transpeptidase;protein_id=AAC74011.1;db_xref=GI:1787155;db_xref=ASAP:ABE-0003142;db_xref=UniProtKB/Swiss-Prot:P22525;db_xref=EcoGene:EG11253 EMBL gene 983075 983623 . + . ID=.2018;gene=ycbK;locus_tag=b0926;gene_synonym=ECK0917;gene_synonym=JW0909;db_xref=EcoGene:EG13703 EMBL CDS 983075 983623 . + 0 ID=.2019;gene=ycbK;locus_tag=b0926;gene_synonym=ECK0917;gene_synonym=JW0909;codon_start=1;transl_table=11;product=M15A protease-related family periplasmic protein;protein_id=AAC74012.1;db_xref=GI:1787157;db_xref=ASAP:ABE-0003145;db_xref=UniProtKB/Swiss-Prot:P0AB06;db_xref=EcoGene:EG13703 EMBL gene 983650 984297 . + . ID=.2020;gene=ycbL;locus_tag=b0927;gene_synonym=ECK0918;gene_synonym=JW0910;db_xref=EcoGene:EG13704 EMBL CDS 983650 984297 . + 0 ID=.2021;gene=ycbL;locus_tag=b0927;gene_synonym=ECK0918;gene_synonym=JW0910;codon_start=1;transl_table=11;product=putative metal-binding enzyme;protein_id=AAC74013.1;db_xref=GI:1787158;db_xref=ASAP:ABE-0003147;db_xref=UniProtKB/Swiss-Prot:P75849;db_xref=EcoGene:EG13704 EMBL repeat_region 984361 984458 . + . ID=.2022;note=RIP86 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 984519 985709 . - . ID=.2023;gene=aspC;locus_tag=b0928;gene_synonym=ECK0919;gene_synonym=JW0911;db_xref=EcoGene:EG10096 EMBL CDS 984519 985709 . - 0 ID=.2024;gene=aspC;locus_tag=b0928;gene_synonym=ECK0919;gene_synonym=JW0911;ec_number=2.6.1.1;function=enzyme%3B Amino acid biosynthesis: Aspartate;experiment=N-terminus verified by Edman degradation: PMID 387032%2C3298240%2C6378205%2C9298646%2C11736651;note=aspartate aminotransferase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009063 - cellular amino acid catabolic process%3B GO_process: GO:0006532 - aspartate biosynthetic process;codon_start=1;transl_table=11;product=aspartate aminotransferase%2C PLP-dependent;protein_id=AAC74014.1;db_xref=GI:1787159;db_xref=ASAP:ABE-0003150;db_xref=UniProtKB/Swiss-Prot:P00509;db_xref=EcoGene:EG10096 EMBL gene 985894 986982 . - . ID=.2025;gene=ompF;locus_tag=b0929;gene_synonym=cmlB;gene_synonym=coa;gene_synonym=cry;gene_synonym=ECK0920;gene_synonym=JW0912;gene_synonym=nfxB?;gene_synonym=tolF;db_xref=EcoGene:EG10671 EMBL CDS 985894 986982 . - 0 ID=.2026;gene=ompF;locus_tag=b0929;gene_synonym=cmlB;gene_synonym=coa;gene_synonym=cry;gene_synonym=ECK0920;gene_synonym=JW0912;gene_synonym=nfxB?;gene_synonym=tolF;function=membrane%3B Outer membrane constituents;note=outer membrane protein 1a (Ia%3Bb%3BF)%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane;codon_start=1;transl_table=11;product=outer membrane porin 1a (Ia%3Bb%3BF);protein_id=AAC74015.1;db_xref=GI:1787160;db_xref=ASAP:ABE-0003153;db_xref=UniProtKB/Swiss-Prot:P02931;db_xref=EcoGene:EG10671 EMBL gene 987585 988985 . - . ID=.2027;gene=asnS;locus_tag=b0930;gene_synonym=ECK0921;gene_synonym=JW0913;gene_synonym=lcs;gene_synonym=tss;db_xref=EcoGene:EG10094 EMBL CDS 987585 988985 . - 0 ID=.2028;gene=asnS;locus_tag=b0930;gene_synonym=ECK0921;gene_synonym=JW0913;gene_synonym=lcs;gene_synonym=tss;ec_number=6.1.1.22;function=enzyme%3B Aminoacyl tRNA synthetases%2C tRNA modification;note=asparagine tRNA synthetase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006418 - tRNA aminoacylation for protein translation;codon_start=1;transl_table=11;product=asparaginyl tRNA synthetase;protein_id=AAC74016.1;db_xref=GI:1787161;db_xref=ASAP:ABE-0003162;db_xref=UniProtKB/Swiss-Prot:P0A8M0;db_xref=EcoGene:EG10094 EMBL gene 989154 990356 . - . ID=.2029;gene=pncB;locus_tag=b0931;gene_synonym=ECK0922;gene_synonym=JW0914;db_xref=EcoGene:EG10742 EMBL CDS 989154 990356 . - 0 ID=.2030;gene=pncB;locus_tag=b0931;gene_synonym=ECK0922;gene_synonym=JW0914;ec_number=6.3.4.21;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Pyridine nucleotide;note=GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0009435 - NAD biosynthetic process;codon_start=1;transl_table=11;product=nicotinate phosphoribosyltransferase;protein_id=AAC74017.1;db_xref=GI:1787162;db_xref=ASAP:ABE-0003167;db_xref=UniProtKB/Swiss-Prot:P18133;db_xref=EcoGene:EG10742 EMBL gene 990622 993234 . + . ID=.2031;gene=pepN;locus_tag=b0932;gene_synonym=ECK0923;gene_synonym=JW0915;db_xref=EcoGene:EG10696 EMBL CDS 990622 993234 . + 0 ID=.2032;gene=pepN;locus_tag=b0932;gene_synonym=ECK0923;gene_synonym=JW0915;ec_number=3.4.11.2;function=enzyme%3B Degradation of proteins%2C peptides%2C glyco;experiment=N-terminus verified by Edman degradation: PMID 2869947;codon_start=1;transl_table=11;product=aminopeptidase N;protein_id=AAC74018.1;db_xref=GI:1787163;db_xref=ASAP:ABE-0003171;db_xref=UniProtKB/Swiss-Prot:P04825;db_xref=EcoGene:EG10696 EMBL gene 993277 994044 . - . ID=.2033;gene=ssuB;locus_tag=b0933;gene_synonym=ECK0924;gene_synonym=JW0916;gene_synonym=ycbE;db_xref=EcoGene:EG12358 EMBL CDS 993277 994044 . - 0 ID=.2034;gene=ssuB;locus_tag=b0933;gene_synonym=ECK0924;gene_synonym=JW0916;gene_synonym=ycbE;function=transport%3B Not classified;note=ATP-binding component of ABC superfamily%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006790 - sulfur metabolic process;codon_start=1;transl_table=11;product=aliphatic sulfonate ABC transporter ATPase;protein_id=AAC74019.1;db_xref=GI:1787164;db_xref=ASAP:ABE-0003173;db_xref=UniProtKB/Swiss-Prot:P0AAI1;db_xref=EcoGene:EG12358 EMBL gene 994041 994832 . - . ID=.2035;gene=ssuC;locus_tag=b0934;gene_synonym=ECK0925;gene_synonym=JW5121;gene_synonym=ycbM;db_xref=EcoGene:EG13705 EMBL CDS 994041 994832 . - 0 ID=.2036;gene=ssuC;locus_tag=b0934;gene_synonym=ECK0925;gene_synonym=JW5121;gene_synonym=ycbM;function=putative transport%3B Not classified;note=membrane component of ABC superfamily%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0006793 - phosphorus metabolic process;codon_start=1;transl_table=11;product=aliphatic sulfonate ABC transporter permease;protein_id=AAC74020.2;db_xref=GI:87081802;db_xref=ASAP:ABE-0003175;db_xref=UniProtKB/Swiss-Prot:P75851;db_xref=EcoGene:EG13705 EMBL gene 994843 995988 . - . ID=.2037;gene=ssuD;locus_tag=b0935;gene_synonym=ECK0926;gene_synonym=JW0918;gene_synonym=ssi6;gene_synonym=ycbN;db_xref=EcoGene:EG13706 EMBL CDS 994843 995988 . - 0 ID=.2038;gene=ssuD;locus_tag=b0935;gene_synonym=ECK0926;gene_synonym=JW0918;gene_synonym=ssi6;gene_synonym=ycbN;ec_number=1.14.14.5;note=GO_process: GO:0006790 - sulfur metabolic process;codon_start=1;transl_table=11;product=alkanesulfonate monooxygenase%2C FMNH(2)-dependent;protein_id=AAC74021.1;db_xref=GI:1787166;db_xref=ASAP:ABE-0003178;db_xref=UniProtKB/Swiss-Prot:P80645;db_xref=EcoGene:EG13706 EMBL gene 995985 996944 . - . ID=.2039;gene=ssuA;locus_tag=b0936;gene_synonym=ECK0927;gene_synonym=JW0919;gene_synonym=ycbO;db_xref=EcoGene:EG13707 EMBL CDS 995985 996944 . - 0 ID=.2040;gene=ssuA;locus_tag=b0936;gene_synonym=ECK0927;gene_synonym=JW0919;gene_synonym=ycbO;note=periplasmic-binding component of ABC superfamily%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0006793 - phosphorus metabolic process;codon_start=1;transl_table=11;product=aliphatic sulfonate ABC transporter periplasmic binding protein;protein_id=AAC74022.2;db_xref=GI:87081803;db_xref=ASAP:ABE-0003180;db_xref=UniProtKB/Swiss-Prot:P75853;db_xref=EcoGene:EG13707 EMBL gene 996937 997512 . - . ID=.2041;gene=ssuE;locus_tag=b0937;gene_synonym=ECK0928;gene_synonym=JW0920;gene_synonym=ssi4;gene_synonym=ycbP;db_xref=EcoGene:EG13708 EMBL CDS 996937 997512 . - 0 ID=.2042;gene=ssuE;locus_tag=b0937;gene_synonym=ECK0928;gene_synonym=JW0920;gene_synonym=ssi4;gene_synonym=ycbP;ec_number=1.5.1.38;experiment=N-terminus verified by Edman degradation: PMID 8774726;note=GO_function: GO:0009055 - electron carrier activity%3B GO_process: GO:0006790 - sulfur metabolic process%3B GO_process: GO:0042594 - response to starvation;codon_start=1;transl_table=11;product=NAD(P)H-dependent FMN reductase;protein_id=AAC74023.1;db_xref=GI:1787168;db_xref=ASAP:ABE-0003182;db_xref=UniProtKB/Swiss-Prot:P80644;db_xref=EcoGene:EG13708 EMBL gene 997868 998407 . + . ID=.2043;gene=elfA;locus_tag=b0938;gene_synonym=ECK0929;gene_synonym=JW5122;gene_synonym=ycbQ;db_xref=EcoGene:EG13709 EMBL CDS 997868 998407 . + 0 ID=.2044;gene=elfA;locus_tag=b0938;gene_synonym=ECK0929;gene_synonym=JW5122;gene_synonym=ycbQ;function=structural component%3B Surface structures;note=putative fimbrial-like protein%3B GO_component: GO:0009289 - pilus;codon_start=1;transl_table=11;product=laminin-binding fimbrin subunit;protein_id=AAC74024.2;db_xref=GI:87081804;db_xref=ASAP:ABE-0003185;db_xref=UniProtKB/Swiss-Prot:P75855;db_xref=EcoGene:EG13709 EMBL gene 998490 999191 . + . ID=.2045;gene=elfD;locus_tag=b0939;gene_synonym=ECK0930;gene_synonym=JW0922;gene_synonym=ycbR;db_xref=EcoGene:EG13710 EMBL CDS 998490 999191 . + 0 ID=.2046;gene=elfD;locus_tag=b0939;gene_synonym=ECK0930;gene_synonym=JW0922;gene_synonym=ycbR;function=putative factor%3B Surface structures;note=GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=putative periplasmic pilin chaperone;protein_id=AAC74025.1;db_xref=GI:1787171;db_xref=ASAP:ABE-0003187;db_xref=UniProtKB/Swiss-Prot:P75856;db_xref=EcoGene:EG13710 EMBL gene 999216 1001816 . + . ID=.2047;gene=elfC;locus_tag=b0940;gene_synonym=ECK0931;gene_synonym=JW0923;gene_synonym=ycbS;db_xref=EcoGene:EG13711 EMBL CDS 999216 1001816 . + 0 ID=.2048;gene=elfC;locus_tag=b0940;gene_synonym=ECK0931;gene_synonym=JW0923;gene_synonym=ycbS;function=putative membrane%3B Outer membrane constituents;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane;codon_start=1;transl_table=11;product=putative outer membrane fimbrial subunit export usher protein;protein_id=AAC74026.1;db_xref=GI:1787172;db_xref=ASAP:ABE-0003189;db_xref=UniProtKB/Swiss-Prot:P75857;db_xref=EcoGene:EG13711 EMBL gene 1001807 1002877 . + . ID=.2049;gene=elfG;locus_tag=b0941;gene_synonym=ECK0932;gene_synonym=JW0924;gene_synonym=ycbT;db_xref=EcoGene:EG13712 EMBL CDS 1001807 1002877 . + 0 ID=.2050;gene=elfG;locus_tag=b0941;gene_synonym=ECK0932;gene_synonym=JW0924;gene_synonym=ycbT;function=putative structural component%3B Surface structures;note=GO_component: GO:0009289 - pilus;codon_start=1;transl_table=11;product=putative fimbrial-like adhesin protein;protein_id=AAC74027.1;db_xref=GI:1787173;db_xref=ASAP:ABE-0003191;db_xref=UniProtKB/Swiss-Prot:P75858;db_xref=EcoGene:EG13712 EMBL gene 1002889 1003431 . + . ID=.2051;gene=ycbU;locus_tag=b0942;gene_synonym=ECK0933;gene_synonym=JW0925;db_xref=EcoGene:EG13713 EMBL CDS 1002889 1003431 . + 0 ID=.2052;gene=ycbU;locus_tag=b0942;gene_synonym=ECK0933;gene_synonym=JW0925;function=putative structural component%3B Surface structures;note=putative fimbrial-like protein%3B GO_component: GO:0009289 - pilus;codon_start=1;transl_table=11;product=putative fimbriae protein;protein_id=AAC74028.1;db_xref=GI:1787174;db_xref=ASAP:ABE-0003193;db_xref=UniProtKB/Swiss-Prot:P75859;db_xref=EcoGene:EG13713 EMBL gene 1003439 1003954 . + . ID=.2053;gene=ycbV;locus_tag=b0943;gene_synonym=ECK0934;gene_synonym=JW5123;db_xref=EcoGene:EG13714 EMBL CDS 1003439 1003954 . + 0 ID=.2054;gene=ycbV;locus_tag=b0943;gene_synonym=ECK0934;gene_synonym=JW5123;function=putative structural component%3B Surface structures;note=putative fimbrial-like protein%3B GO_component: GO:0009289 - pilus;codon_start=1;transl_table=11;product=putative fimbrial-like adhesin protein;protein_id=AAC74029.2;db_xref=GI:87081805;db_xref=ASAP:ABE-0003195;db_xref=UniProtKB/Swiss-Prot:P75860;db_xref=EcoGene:EG13714 EMBL gene 1003947 1004657 . + . ID=.2055;gene=ycbF;locus_tag=b0944;gene_synonym=ECK0935;gene_synonym=JW5124;db_xref=EcoGene:EG12397 EMBL CDS 1003947 1004657 . + 0 ID=.2056;gene=ycbF;locus_tag=b0944;gene_synonym=ECK0935;gene_synonym=JW5124;function=putative factor%3B Surface structures;note=GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=putative periplasmic pilin chaperone;protein_id=AAC74030.2;db_xref=GI:87081806;db_xref=ASAP:ABE-0003197;db_xref=UniProtKB/Swiss-Prot:P40876;db_xref=EcoGene:EG12397 EMBL gene 1004768 1005778 . + . ID=.2057;gene=pyrD;locus_tag=b0945;gene_synonym=ECK0936;gene_synonym=JW0928;db_xref=EcoGene:EG10807 EMBL CDS 1004768 1005778 . + 0 ID=.2058;gene=pyrD;locus_tag=b0945;gene_synonym=ECK0936;gene_synonym=JW0928;ec_number=1.3.5.2;function=enzyme%3B Pyrimidine ribonucleotide biosynthesis;experiment=N-terminus verified by Edman degradation: PMID 2992959;note=dihydro-orotate dehydrogenase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006221 - pyrimidine nucleotide biosynthetic process;codon_start=1;transl_table=11;product=dihydro-orotate oxidase%2C FMN-linked;protein_id=AAC74031.1;db_xref=GI:1787177;db_xref=ASAP:ABE-0003201;db_xref=UniProtKB/Swiss-Prot:P0A7E1;db_xref=EcoGene:EG10807 EMBL gene 1005952 1006494 . + . ID=.2059;gene=zapC;locus_tag=b0946;gene_synonym=ECK0937;gene_synonym=JW5125;gene_synonym=ycbW;db_xref=EcoGene:EG13715 EMBL CDS 1005952 1006494 . + 0 ID=.2060;gene=zapC;locus_tag=b0946;gene_synonym=ECK0937;gene_synonym=JW5125;gene_synonym=ycbW;codon_start=1;transl_table=11;product=FtsZ stabilizer;protein_id=AAC74032.2;db_xref=GI:87081807;db_xref=ASAP:ABE-0003204;db_xref=UniProtKB/Swiss-Prot:P75862;db_xref=EcoGene:EG13715 EMBL gene 1006491 1007600 . - . ID=.2061;gene=ycbX;locus_tag=b0947;gene_synonym=ECK0938;gene_synonym=JW5126;db_xref=EcoGene:EG13716 EMBL CDS 1006491 1007600 . - 0 ID=.2062;gene=ycbX;locus_tag=b0947;gene_synonym=ECK0938;gene_synonym=JW5126;note=GO_function: GO:0009055 - electron carrier activity;codon_start=1;transl_table=11;product=6-N-hydroxylaminopurine detoxification oxidoreductase;protein_id=AAC74033.1;db_xref=GI:1787179;db_xref=ASAP:ABE-0003206;db_xref=UniProtKB/Swiss-Prot:P75863;db_xref=EcoGene:EG13716 EMBL gene 1007844 1009952 . + . ID=.2063;gene=rlmL;locus_tag=b0948;gene_synonym=ECK0939;gene_synonym=JW0931;gene_synonym=rlmK;gene_synonym=rlmKL;gene_synonym=ycbY;db_xref=EcoGene:EG13717 EMBL CDS 1007844 1009952 . + 0 ID=.2064;gene=rlmL;locus_tag=b0948;gene_synonym=ECK0939;gene_synonym=JW0931;gene_synonym=rlmK;gene_synonym=rlmKL;gene_synonym=ycbY;function=enzyme%3B rRNA modification;note=putative oxidoreductase;codon_start=1;transl_table=11;product=23S rRNA m(2)G2445 and m(7)G2069 methyltransferases%2C SAM-dependent;protein_id=AAC74034.1;db_xref=GI:1787181;db_xref=ASAP:ABE-0003211;db_xref=UniProtKB/Swiss-Prot:P75864;db_xref=EcoGene:EG13717 EMBL gene 1009964 1011871 . + . ID=.2065;gene=uup;locus_tag=b0949;gene_synonym=ECK0940;gene_synonym=JW0932;gene_synonym=ycbH;gene_synonym=ycbI;db_xref=EcoGene:EG13134 EMBL CDS 1009964 1011871 . + 0 ID=.2066;gene=uup;locus_tag=b0949;gene_synonym=ECK0940;gene_synonym=JW0932;gene_synonym=ycbH;gene_synonym=ycbI;function=factor%3B DNA - replication%2C repair%2C restriction/modification;note=putative ATP-binding component of a transport system%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=replication regulatory ABC-F family DNA-binding ATPase;protein_id=AAC74035.1;db_xref=GI:1787182;db_xref=ASAP:ABE-0003213;db_xref=UniProtKB/Swiss-Prot:P43672;db_xref=EcoGene:EG13134 EMBL repeat_region 1011919 1011947 . + . ID=.2067;note=REP87 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 1012001 1013254 . + . ID=.2068;gene=pqiA;locus_tag=b0950;gene_synonym=ECK0941;gene_synonym=JW0933;gene_synonym=pqi5;db_xref=EcoGene:EG12965 EMBL CDS 1012001 1013254 . + 0 ID=.2069;gene=pqiA;locus_tag=b0950;gene_synonym=ECK0941;gene_synonym=JW0933;gene_synonym=pqi5;function=phenotype%3B Not classified;note=paraquat-inducible protein A;codon_start=1;transl_table=11;product=paraquat-inducible%2C SoxRS-regulated inner membrane protein;protein_id=AAC74036.1;db_xref=GI:1787183;db_xref=ASAP:ABE-0003219;db_xref=UniProtKB/Swiss-Prot:P0AFL9;db_xref=EcoGene:EG12965 EMBL gene 1013259 1014899 . + . ID=.2070;gene=pqiB;locus_tag=b0951;gene_synonym=ECK0942;gene_synonym=JW0934;gene_synonym=pqi5;db_xref=EcoGene:EG12966 EMBL CDS 1013259 1014899 . + 0 ID=.2071;gene=pqiB;locus_tag=b0951;gene_synonym=ECK0942;gene_synonym=JW0934;gene_synonym=pqi5;function=phenotype%3B Not classified;codon_start=1;transl_table=11;product=paraquat-inducible%2C SoxRS-regulated MCE domain protein;protein_id=AAC74037.1;db_xref=GI:1787184;db_xref=ASAP:ABE-0003221;db_xref=UniProtKB/Swiss-Prot:P43671;db_xref=EcoGene:EG12966 EMBL gene 1014896 1015459 . + . ID=.2072;gene=pqiC;locus_tag=b0952;gene_synonym=ECK0943;gene_synonym=JW5127;gene_synonym=ymbA;db_xref=EcoGene:EG13719 EMBL CDS 1014896 1015459 . + 0 ID=.2073;gene=pqiC;locus_tag=b0952;gene_synonym=ECK0943;gene_synonym=JW5127;gene_synonym=ymbA;codon_start=1;transl_table=11;product=DUF330 family putative lipoprotein;protein_id=AAC74038.2;db_xref=GI:145693109;db_xref=ASAP:ABE-0003223;db_xref=UniProtKB/Swiss-Prot:P0AB10;db_xref=EcoGene:EG13719 EMBL gene 1015715 1015882 . + . ID=.2074;gene=rmf;locus_tag=b0953;gene_synonym=ECK0944;gene_synonym=JW0936;db_xref=EcoGene:EG50004 EMBL CDS 1015715 1015882 . + 0 ID=.2075;gene=rmf;locus_tag=b0953;gene_synonym=ECK0944;gene_synonym=JW0936;function=factor%3B Ribosomes - maturation and modification;experiment=N-terminus verified by Edman degradation: PMID 2181444;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=ribosome modulation factor;protein_id=AAC74039.1;db_xref=GI:1787186;db_xref=ASAP:ABE-0003227;db_xref=UniProtKB/Swiss-Prot:P0AFW2;db_xref=EcoGene:EG50004 EMBL gene 1015952 1016470 . - . ID=.2076;gene=fabA;locus_tag=b0954;gene_synonym=ECK0945;gene_synonym=JW0937;db_xref=EcoGene:EG10273 EMBL CDS 1015952 1016470 . - 0 ID=.2077;gene=fabA;locus_tag=b0954;gene_synonym=ECK0945;gene_synonym=JW0937;ec_number=4.2.1.59;ec_number=5.3.3.14;function=enzyme%3B Fatty acid and phosphatidic acid biosynthesis;experiment=N-terminus verified by Edman degradation: PMID 2832401;note=beta-hydroxydecanoyl thioester dehydrase%2C trans-2-decenoyl-ACP isomerase;codon_start=1;transl_table=11;product=beta-hydroxydecanoyl thioester dehydrase;protein_id=AAC74040.1;db_xref=GI:1787187;db_xref=ASAP:ABE-0003229;db_xref=UniProtKB/Swiss-Prot:P0A6Q3;db_xref=EcoGene:EG10273 EMBL gene 1016539 1018299 . - . ID=.2078;gene=ycbZ;locus_tag=b0955;gene_synonym=ECK0946;gene_synonym=JW0938;db_xref=EcoGene:EG13718 EMBL CDS 1016539 1018299 . - 0 ID=.2079;gene=ycbZ;locus_tag=b0955;gene_synonym=ECK0946;gene_synonym=JW0938;function=putative enzyme%3B Not classified;note=putative ATP-dependent protease%3B GO_process: GO:0006508 - proteolysis;codon_start=1;transl_table=11;product=putative peptidase;protein_id=AAC74041.1;db_xref=GI:1787188;db_xref=ASAP:ABE-0003233;db_xref=UniProtKB/Swiss-Prot:P75867;db_xref=EcoGene:EG13718 EMBL gene 1018485 1018937 . + . ID=.2080;gene=matP;locus_tag=b0956;gene_synonym=ECK0947;gene_synonym=JW0939;gene_synonym=ycbG;db_xref=EcoGene:EG12855 EMBL CDS 1018485 1018937 . + 0 ID=.2081;gene=matP;locus_tag=b0956;gene_synonym=ECK0947;gene_synonym=JW0939;gene_synonym=ycbG;function=factor%3B DNA - replication%2C repair%2C restriction/modification;note=putative dehydrogenase;codon_start=1;transl_table=11;product=Ter macrodomain organizer matS-binding protein;protein_id=AAC74042.1;db_xref=GI:1787190;db_xref=ASAP:ABE-0003238;db_xref=UniProtKB/Swiss-Prot:P0A8N0;db_xref=EcoGene:EG12855 EMBL gene 1019013 1020053 . - . ID=.2082;gene=ompA;locus_tag=b0957;gene_synonym=con;gene_synonym=ECK0948;gene_synonym=JW0940;gene_synonym=tolG;gene_synonym=tut;db_xref=EcoGene:EG10669 EMBL CDS 1019013 1020053 . - 0 ID=.2083;gene=ompA;locus_tag=b0957;gene_synonym=con;gene_synonym=ECK0948;gene_synonym=JW0940;gene_synonym=tolG;gene_synonym=tut;function=membrane%3B Outer membrane constituents;note=outer membrane protein 3a (II*%3BG%3Bd)%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane;codon_start=1;transl_table=11;product=outer membrane protein A (3a%3BII*%3BG%3Bd);protein_id=AAC74043.1;db_xref=GI:1787191;db_xref=ASAP:ABE-0003240;db_xref=UniProtKB/Swiss-Prot:P0A910;db_xref=EcoGene:EG10669 EMBL gene 1020410 1020919 . - . ID=.2084;gene=sulA;locus_tag=b0958;gene_synonym=ECK0949;gene_synonym=JW0941;gene_synonym=sfiA;db_xref=EcoGene:EG10984 EMBL CDS 1020410 1020919 . - 0 ID=.2085;gene=sulA;locus_tag=b0958;gene_synonym=ECK0949;gene_synonym=JW0941;gene_synonym=sfiA;function=phenotype%3B Cell division;note=suppressor of lon%3B inhibits cell division and ftsZ ring formation%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0006281 - DNA repair%3B GO_process: GO:0009432 - SOS response;codon_start=1;transl_table=11;product=SOS cell division inhibitor;protein_id=AAC74044.1;db_xref=GI:1787192;db_xref=ASAP:ABE-0003244;db_xref=UniProtKB/Swiss-Prot:P0AFZ5;db_xref=EcoGene:EG10984 EMBL gene 1021138 1021767 . + . ID=.2086;gene=sxy;locus_tag=b0959;gene_synonym=ECK0950;gene_synonym=JW0942;gene_synonym=tfoX;gene_synonym=yccR;db_xref=EcoGene:EG13720 EMBL CDS 1021138 1021767 . + 0 ID=.2087;gene=sxy;locus_tag=b0959;gene_synonym=ECK0950;gene_synonym=JW0942;gene_synonym=tfoX;gene_synonym=yccR;codon_start=1;transl_table=11;product=CRP-S-dependent promoter expression factor;protein_id=AAC74045.1;db_xref=GI:1787193;db_xref=ASAP:ABE-0003249;db_xref=UniProtKB/Swiss-Prot:P75869;db_xref=EcoGene:EG13720 EMBL gene 1021730 1023883 . - . ID=.2088;gene=yccS;locus_tag=b0960;gene_synonym=ECK0951;gene_synonym=JW5128;db_xref=EcoGene:EG13721 EMBL CDS 1021730 1023883 . - 0 ID=.2089;gene=yccS;locus_tag=b0960;gene_synonym=ECK0951;gene_synonym=JW5128;codon_start=1;transl_table=11;product=putative transporter%2C FUSC superfamily inner membrane protein;protein_id=AAC74046.2;db_xref=GI:87081808;db_xref=ASAP:ABE-0003251;db_xref=UniProtKB/Swiss-Prot:P75870;db_xref=EcoGene:EG13721 EMBL gene 1023902 1024348 . - . ID=.2090;gene=yccF;locus_tag=b0961;gene_synonym=ECK0952;gene_synonym=JW0944;db_xref=EcoGene:EG12306 EMBL CDS 1023902 1024348 . - 0 ID=.2091;gene=yccF;locus_tag=b0961;gene_synonym=ECK0952;gene_synonym=JW0944;codon_start=1;transl_table=11;product=DUF307 family inner membrane protein;protein_id=AAC74047.1;db_xref=GI:1787195;db_xref=ASAP:ABE-0003253;db_xref=UniProtKB/Swiss-Prot:P0AB12;db_xref=EcoGene:EG12306 EMBL gene 1024471 1026525 . + . ID=.2092;gene=helD;locus_tag=b0962;gene_synonym=ECK0953;gene_synonym=JW0945;gene_synonym=srjB;db_xref=EcoGene:EG10426 EMBL CDS 1024471 1026525 . + 0 ID=.2093;gene=helD;locus_tag=b0962;gene_synonym=ECK0953;gene_synonym=JW0945;gene_synonym=srjB;ec_number=3.6.1.-;function=enzyme%3B DNA - replication%2C repair%2C restriction/modification;experiment=N-terminus verified by Edman degradation: PMID 2542273;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006261 - DNA-dependent DNA replication;codon_start=1;transl_table=11;product=DNA helicase IV;protein_id=AAC74048.1;db_xref=GI:1787196;db_xref=ASAP:ABE-0003257;db_xref=UniProtKB/Swiss-Prot:P15038;db_xref=EcoGene:EG10426 EMBL gene 1026557 1027015 . - . ID=.2094;gene=mgsA;locus_tag=b0963;gene_synonym=ECK0954;gene_synonym=JW5129;gene_synonym=mgs;gene_synonym=yccG;db_xref=EcoGene:EG12307 EMBL CDS 1026557 1027015 . - 0 ID=.2095;gene=mgsA;locus_tag=b0963;gene_synonym=ECK0954;gene_synonym=JW5129;gene_synonym=mgs;gene_synonym=yccG;ec_number=4.2.3.3;function=enzyme%3B Central intermediary metabolism: Pool%2C multipurpose conversions;experiment=N-terminus verified by Edman degradation: PMID 9489667%2C9665712;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009438 - methylglyoxal metabolic process;codon_start=1;transl_table=11;product=methylglyoxal synthase;protein_id=AAC74049.2;db_xref=GI:87081809;db_xref=ASAP:ABE-0003259;db_xref=UniProtKB/Swiss-Prot:P0A731;db_xref=EcoGene:EG12307 EMBL gene 1027111 1027773 . - . ID=.2096;gene=yccT;locus_tag=b0964;gene_synonym=ECK0955;gene_synonym=JW0947;db_xref=EcoGene:EG13722 EMBL CDS 1027111 1027773 . - 0 ID=.2097;gene=yccT;locus_tag=b0964;gene_synonym=ECK0955;gene_synonym=JW0947;codon_start=1;transl_table=11;product=UPF0319 family protein;protein_id=AAC74050.1;db_xref=GI:1787198;db_xref=ASAP:ABE-0003262;db_xref=UniProtKB/Swiss-Prot:P0A8X4;db_xref=EcoGene:EG13722 EMBL gene 1027946 1028359 . + . ID=.2098;gene=yccU;locus_tag=b0965;gene_synonym=ECK0956;gene_synonym=JW5130;db_xref=EcoGene:EG13723 EMBL CDS 1027946 1028359 . + 0 ID=.2099;gene=yccU;locus_tag=b0965;gene_synonym=ECK0956;gene_synonym=JW5130;experiment=N-terminus verified by Edman degradation: PMID 9868784;codon_start=1;transl_table=11;product=putative CoA-binding protein;protein_id=AAC74051.2;db_xref=GI:87081810;db_xref=ASAP:ABE-0003267;db_xref=UniProtKB/Swiss-Prot:P75874;db_xref=EcoGene:EG13723 EMBL repeat_region 1028366 1028389 . + . ID=.2100;note=REP88 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 1028404 1028721 . - . ID=.2101;gene=hspQ;locus_tag=b0966;gene_synonym=ECK0957;gene_synonym=JW5970;gene_synonym=yccV;db_xref=EcoGene:EG13724 EMBL CDS 1028404 1028721 . - 0 ID=.2102;gene=hspQ;locus_tag=b0966;gene_synonym=ECK0957;gene_synonym=JW5970;gene_synonym=yccV;experiment=N-terminus verified by Edman degradation: PMID 15569148;codon_start=1;transl_table=11;product=heat shock protein involved in degradation of mutant DnaA%3B hemimethylated oriC DNA-binding protein;protein_id=AAC74052.2;db_xref=GI:145693110;db_xref=ASAP:ABE-0003269;db_xref=UniProtKB/Swiss-Prot:P0AB20;db_xref=EcoGene:EG13724 EMBL gene 1028779 1029969 . - . ID=.2103;gene=rlmI;locus_tag=b0967;gene_synonym=ECK0958;gene_synonym=JW5898;gene_synonym=yccW;db_xref=EcoGene:EG13725 EMBL CDS 1028779 1029969 . - 0 ID=.2104;gene=rlmI;locus_tag=b0967;gene_synonym=ECK0958;gene_synonym=JW5898;gene_synonym=yccW;function=enzyme%3B rRNA modification;note=putative oxidoreductase;codon_start=1;transl_table=11;product=23S rRNA m(5)C1962 methyltransferase%2C SAM-dependent;protein_id=AAC74053.2;db_xref=GI:145693111;db_xref=ASAP:ABE-0003272;db_xref=UniProtKB/Swiss-Prot:P75876;db_xref=EcoGene:EG13725 EMBL gene 1030064 1030342 . + . ID=.2105;gene=yccX;locus_tag=b0968;gene_synonym=ECK0959;gene_synonym=JW5131;db_xref=EcoGene:EG13726 EMBL CDS 1030064 1030342 . + 0 ID=.2106;gene=yccX;locus_tag=b0968;gene_synonym=ECK0959;gene_synonym=JW5131;codon_start=1;transl_table=11;product=weak acylphosphatase;protein_id=AAC74054.1;db_xref=GI:1787203;db_xref=ASAP:ABE-0003276;db_xref=UniProtKB/Swiss-Prot:P0AB65;db_xref=EcoGene:EG13726 EMBL gene 1030339 1030668 . - . ID=.2107;gene=tusE;locus_tag=b0969;gene_synonym=ECK0960;gene_synonym=JW0952;gene_synonym=yccK;db_xref=EcoGene:EG12876 EMBL CDS 1030339 1030668 . - 0 ID=.2108;gene=tusE;locus_tag=b0969;gene_synonym=ECK0960;gene_synonym=JW0952;gene_synonym=yccK;function=orf%3B Not classified;note=putative sulfite reductase;codon_start=1;transl_table=11;product=mnm(5)-s(2)U34-tRNA 2-thiolation sulfurtransferase;protein_id=AAC74055.2;db_xref=GI:87081811;db_xref=ASAP:ABE-0003278;db_xref=UniProtKB/Swiss-Prot:P0AB18;db_xref=EcoGene:EG12876 EMBL gene 1030759 1031418 . - . ID=.2109;gene=yccA;locus_tag=b0970;gene_synonym=ECK0961;gene_synonym=JW0953;db_xref=EcoGene:EG11113 EMBL CDS 1030759 1031418 . - 0 ID=.2110;gene=yccA;locus_tag=b0970;gene_synonym=ECK0961;gene_synonym=JW0953;function=putative transport%3B Not classified;note=putative carrier/transport protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=Modulator of FtsH protease%2C inner membrane protein;protein_id=AAC74056.1;db_xref=GI:1787205;db_xref=ASAP:ABE-0003280;db_xref=UniProtKB/Swiss-Prot:P0AAC6;db_xref=EcoGene:EG11113 EMBL gene 1031625 1031712 . - . ID=.2111;gene=serT;locus_tag=b0971;gene_synonym=divE;gene_synonym=ECK0962;gene_synonym=JWR0026;db_xref=EcoGene:EG30093 EMBL tRNA 1031625 1031712 . - . ID=.2112;gene=serT;locus_tag=b0971;gene_synonym=divE;gene_synonym=ECK0962;gene_synonym=JWR0026;product=tRNA-Ser;note=anticodon: UGA;db_xref=ASAP:ABE-0003283;db_xref=EcoGene:EG30093 EMBL gene 1032139 1033257 . + . ID=.2113;gene=hyaA;locus_tag=b0972;gene_synonym=ECK0963;gene_synonym=JW0954;db_xref=EcoGene:EG10468 EMBL CDS 1032139 1033257 . + 0 ID=.2114;gene=hyaA;locus_tag=b0972;gene_synonym=ECK0963;gene_synonym=JW0954;ec_number=1.12.99.6;function=enzyme%3B Energy metabolism%2C carbon: Aerobic respiration;note=hydrogenase-1 small subunit%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009060 - aerobic respiration%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=hydrogenase 1%2C small subunit;protein_id=AAC74057.1;db_xref=GI:1787206;db_xref=ASAP:ABE-0003286;db_xref=UniProtKB/Swiss-Prot:P69739;db_xref=EcoGene:EG10468 EMBL gene 1033254 1035047 . + . ID=.2115;gene=hyaB;locus_tag=b0973;gene_synonym=ECK0964;gene_synonym=JW0955;db_xref=EcoGene:EG10469 EMBL CDS 1033254 1035047 . + 0 ID=.2116;gene=hyaB;locus_tag=b0973;gene_synonym=ECK0964;gene_synonym=JW0955;ec_number=1.12.99.6;function=enzyme%3B Energy metabolism%2C carbon: Aerobic respiration;experiment=N-terminus verified by Edman degradation: PMID 2180913;note=hydrogenase-1 large subunit%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009060 - aerobic respiration%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=hydrogenase 1%2C large subunit;protein_id=AAC74058.1;db_xref=GI:1787207;db_xref=ASAP:ABE-0003288;db_xref=UniProtKB/Swiss-Prot:P0ACD8;db_xref=EcoGene:EG10469 EMBL gene 1035066 1035773 . + . ID=.2117;gene=hyaC;locus_tag=b0974;gene_synonym=ECK0965;gene_synonym=JW0956;db_xref=EcoGene:EG10470 EMBL CDS 1035066 1035773 . + 0 ID=.2118;gene=hyaC;locus_tag=b0974;gene_synonym=ECK0965;gene_synonym=JW0956;function=putative enzyme%3B Energy metabolism%2C carbon: Aerobic respiration;note=probable Ni/Fe-hydrogenase 1 b-type cytochrome subunit%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009060 - aerobic respiration%3B GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0017004 - cytochrome complex assembly;codon_start=1;transl_table=11;product=hydrogenase 1%2C b-type cytochrome subunit;protein_id=AAC74059.1;db_xref=GI:1787208;db_xref=ASAP:ABE-0003290;db_xref=UniProtKB/Swiss-Prot:P0AAM1;db_xref=EcoGene:EG10470 EMBL gene 1035770 1036357 . + . ID=.2119;gene=hyaD;locus_tag=b0975;gene_synonym=ECK0966;gene_synonym=JW0957;db_xref=EcoGene:EG10471 EMBL CDS 1035770 1036357 . + 0 ID=.2120;gene=hyaD;locus_tag=b0975;gene_synonym=ECK0966;gene_synonym=JW0957;function=factor%3B Energy metabolism%2C carbon: Aerobic respiration;note=processing of HyaA and HyaB proteins%3B GO_process: GO:0009060 - aerobic respiration%3B GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=hydrogenase 1 maturation protease;protein_id=AAC74060.1;db_xref=GI:1787209;db_xref=ASAP:ABE-0003292;db_xref=UniProtKB/Swiss-Prot:P19930;db_xref=EcoGene:EG10471 EMBL gene 1036354 1036752 . + . ID=.2121;gene=hyaE;locus_tag=b0976;gene_synonym=ECK0967;gene_synonym=JW0958;db_xref=EcoGene:EG10472 EMBL CDS 1036354 1036752 . + 0 ID=.2122;gene=hyaE;locus_tag=b0976;gene_synonym=ECK0967;gene_synonym=JW0958;function=factor%3B Energy metabolism%2C carbon: Aerobic respiration;note=processing of HyaA and HyaB proteins%3B GO_process: GO:0009060 - aerobic respiration%3B GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=putative HyaA chaperone;protein_id=AAC74061.1;db_xref=GI:1787210;db_xref=ASAP:ABE-0003294;db_xref=UniProtKB/Swiss-Prot:P19931;db_xref=EcoGene:EG10472 EMBL gene 1036749 1037606 . + . ID=.2123;gene=hyaF;locus_tag=b0977;gene_synonym=ECK0968;gene_synonym=JW0959;db_xref=EcoGene:EG10473 EMBL CDS 1036749 1037606 . + 0 ID=.2124;gene=hyaF;locus_tag=b0977;gene_synonym=ECK0968;gene_synonym=JW0959;function=phenotype%3B Energy metabolism%2C carbon: Aerobic respiration;note=nickel incorporation into hydrogenase-1 proteins%3B GO_process: GO:0009060 - aerobic respiration%3B GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=hydrogenase-1 protein nickel incorporation factor;protein_id=AAC74062.1;db_xref=GI:1787211;db_xref=ASAP:ABE-0003296;db_xref=UniProtKB/Swiss-Prot:P19932;db_xref=EcoGene:EG10473 EMBL gene 1037740 1039284 . + . ID=.2125;gene=cbdA;locus_tag=b0978;gene_synonym=appC;gene_synonym=cyxA;gene_synonym=ECK0969;gene_synonym=JW0960;db_xref=EcoGene:EG11380 EMBL CDS 1037740 1039284 . + 0 ID=.2126;gene=cbdA;locus_tag=b0978;gene_synonym=appC;gene_synonym=cyxA;gene_synonym=ECK0969;gene_synonym=JW0960;ec_number=1.10.3.-;function=putative enzyme%3B Energy metabolism%2C carbon: Electron transport;note=GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=cytochrome bd-II oxidase%2C subunit I;protein_id=AAC74063.1;db_xref=GI:1787212;db_xref=ASAP:ABE-0003300;db_xref=UniProtKB/Swiss-Prot:P26459;db_xref=EcoGene:EG11380 EMBL gene 1039296 1040432 . + . ID=.2127;gene=cbdB;locus_tag=b0979;gene_synonym=appB;gene_synonym=cyxB;gene_synonym=ECK0970;gene_synonym=JW0961;db_xref=EcoGene:EG11379 EMBL CDS 1039296 1040432 . + 0 ID=.2128;gene=cbdB;locus_tag=b0979;gene_synonym=appB;gene_synonym=cyxB;gene_synonym=ECK0970;gene_synonym=JW0961;ec_number=1.10.3.-;function=putative enzyme%3B Energy metabolism%2C carbon: Electron transport;note=probable third cytochrome oxidase%2C subunit II%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=cytochrome bd-II oxidase%2C subunit II;protein_id=AAC74064.1;db_xref=GI:1787213;db_xref=ASAP:ABE-0003302;db_xref=UniProtKB/Swiss-Prot:P26458;db_xref=EcoGene:EG11379 EMBL gene 1040445 1040537 . + . ID=.2129;gene=cbdX;locus_tag=b4592;gene_synonym=appX;gene_synonym=ECK4402;gene_synonym=yccB;db_xref=EcoGene:EG11114 EMBL CDS 1040445 1040537 . + 0 ID=.2130;gene=cbdX;locus_tag=b4592;gene_synonym=appX;gene_synonym=ECK4402;gene_synonym=yccB;codon_start=1;transl_table=11;product=putative cytochrome bd-II oxidase subunit;protein_id=ABP93439.1;db_xref=GI:145693112;db_xref=UniProtKB/Swiss-Prot:P24244;db_xref=EcoGene:EG11114 EMBL repeat_region 1040543 1040578 . + . ID=.2131;note=REP89 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 1040617 1041915 . + . ID=.2132;gene=appA;locus_tag=b0980;gene_synonym=ECK0971;gene_synonym=JW0963;db_xref=EcoGene:EG10049 EMBL CDS 1040617 1041915 . + 0 ID=.2133;gene=appA;locus_tag=b0980;gene_synonym=ECK0971;gene_synonym=JW0963;ec_number=3.1.3.2;ec_number=3.1.3.26;function=enzyme%3B Central intermediary metabolism: Pool%2C multipurpose conversions;note=phosphoanhydride phosphorylase%3B pH 2.5 acid phosphatase%3B periplasmic%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0006793 - phosphorus metabolic process%3B GO_process: GO:0042594 - response to starvation;codon_start=1;transl_table=11;product=phosphoanhydride phosphorylase;protein_id=AAC74065.1;db_xref=GI:1787215;db_xref=ASAP:ABE-0003305;db_xref=UniProtKB/Swiss-Prot:P07102;db_xref=EcoGene:EG10049 EMBL repeat_region 1041985 1042018 . + . ID=.2134;note=REP90 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 1042030 1044210 . - . ID=.2135;gene=etk;locus_tag=b0981;gene_synonym=ECK0972;gene_synonym=JW0964;gene_synonym=yccC;db_xref=EcoGene:EG11826 EMBL CDS 1042030 1044210 . - 0 ID=.2136;gene=etk;locus_tag=b0981;gene_synonym=ECK0972;gene_synonym=JW0964;gene_synonym=yccC;ec_number=2.7.10.2;experiment=N-terminus verified by Edman degradation: PMID 10369665;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=tyrosine-protein kinase%2C role in O-antigen capsule formation;protein_id=AAC74066.1;db_xref=GI:1787216;db_xref=ASAP:ABE-0003309;db_xref=UniProtKB/Swiss-Prot:P38134;db_xref=EcoGene:EG11826 EMBL gene 1044230 1044676 . - . ID=.2137;gene=etp;locus_tag=b0982;gene_synonym=ECK0973;gene_synonym=JW5132;gene_synonym=yccY;db_xref=EcoGene:EG13727 EMBL CDS 1044230 1044676 . - 0 ID=.2138;gene=etp;locus_tag=b0982;gene_synonym=ECK0973;gene_synonym=JW5132;gene_synonym=yccY;function=enzyme%3B Not classified;note=putative phosphatase%3B GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=O-antigen capsule forming protein-tyrosine-phosphatase%3B Etk-P dephosphorylase;protein_id=AAC74067.2;db_xref=GI:87081812;db_xref=ASAP:ABE-0003312;db_xref=UniProtKB/Swiss-Prot:P0ACZ2;db_xref=EcoGene:EG13727 EMBL gene 1044664 1045803 . - . ID=.2139;gene=gfcE;locus_tag=b0983;gene_synonym=ECK0974;gene_synonym=JW0966;gene_synonym=yccZ;db_xref=EcoGene:EG13728 EMBL CDS 1044664 1045803 . - 0 ID=.2140;gene=gfcE;locus_tag=b0983;gene_synonym=ECK0974;gene_synonym=JW0966;gene_synonym=yccZ;function=transport%3B Not classified;note=putative function in exopolysaccharide production%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane;codon_start=1;transl_table=11;product=putative O-antigen capsule outer membrane auxillary protein export channel;protein_id=AAC74068.1;db_xref=GI:1787218;db_xref=ASAP:ABE-0003317;db_xref=UniProtKB/Swiss-Prot:P0A932;db_xref=EcoGene:EG13728 EMBL gene 1045849 1047945 . - . ID=.2141;gene=gfcD;locus_tag=b0984;gene_synonym=ECK0975;gene_synonym=JW0967;gene_synonym=ymcA;db_xref=EcoGene:EG13729 EMBL CDS 1045849 1047945 . - 0 ID=.2142;gene=gfcD;locus_tag=b0984;gene_synonym=ECK0975;gene_synonym=JW0967;gene_synonym=ymcA;codon_start=1;transl_table=11;product=putative O-antigen capsule production periplasmic protein;protein_id=AAC74069.1;db_xref=GI:1787219;db_xref=ASAP:ABE-0003319;db_xref=UniProtKB/Swiss-Prot:P75882;db_xref=EcoGene:EG13729 EMBL gene 1047945 1048691 . - . ID=.2143;gene=gfcC;locus_tag=b0985;gene_synonym=ECK0976;gene_synonym=JW0968;gene_synonym=ymcB;db_xref=EcoGene:EG13730 EMBL CDS 1047945 1048691 . - 0 ID=.2144;gene=gfcC;locus_tag=b0985;gene_synonym=ECK0976;gene_synonym=JW0968;gene_synonym=ymcB;codon_start=1;transl_table=11;product=putative O-antigen capsule production periplasmic protein;protein_id=AAC74070.1;db_xref=GI:1787220;db_xref=ASAP:ABE-0003321;db_xref=UniProtKB/Swiss-Prot:P75883;db_xref=EcoGene:EG13730 EMBL gene 1048688 1049332 . - . ID=.2145;gene=gfcB;locus_tag=b0986;gene_synonym=ECK0977;gene_synonym=JW0969;gene_synonym=ymcC;db_xref=EcoGene:EG13731 EMBL CDS 1048688 1049332 . - 0 ID=.2146;gene=gfcB;locus_tag=b0986;gene_synonym=ECK0977;gene_synonym=JW0969;gene_synonym=ymcC;function=putative regulator%3B Not classified;note=putative regulator;codon_start=1;transl_table=11;product=O-antigen capsule production lipoprotein;protein_id=AAC74071.1;db_xref=GI:1787221;db_xref=ASAP:ABE-0003323;db_xref=UniProtKB/Swiss-Prot:P75884;db_xref=EcoGene:EG13731 EMBL gene 1049439 1049744 . - . ID=.2147;gene=gfcA;locus_tag=b0987;gene_synonym=ECK0978;gene_synonym=JW5133;gene_synonym=ymcD;db_xref=EcoGene:EG13732 EMBL CDS 1049439 1049744 . - 0 ID=.2148;gene=gfcA;locus_tag=b0987;gene_synonym=ECK0978;gene_synonym=JW5133;gene_synonym=ymcD;note=GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=O-antigen capsule production threonine-rich inner membrane protein;protein_id=AAC74072.2;db_xref=GI:87081813;db_xref=ASAP:ABE-0003325;db_xref=UniProtKB/Swiss-Prot:P75885;db_xref=EcoGene:EG13732 EMBL sequence_feature 1049778 1050545 . + . ID=.2149;note=*mobile_element_type: insertion sequence:IS1D EMBL gene 1049833 1050108 . + . ID=.2150;gene=insA;locus_tag=b4516;gene_synonym=ECK4531;note=insA4;db_xref=EcoGene:EG40001 EMBL CDS 1049833 1050108 . + 0 ID=.2151;gene=insA;locus_tag=b4516;gene_synonym=ECK4531;function=IS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;codon_start=1;transl_table=11;product=IS1 repressor TnpA;protein_id=ABD18646.1;db_xref=GI:87081814;db_xref=ASAP:ABE-0285037;db_xref=UniProtKB/Swiss-Prot:P0CF10;db_xref=EcoGene:EG40001 EMBL gene 1050027 1050530 . + . ID=.2152;gene=insB1;locus_tag=b0988;gene_synonym=ECK0022;db_xref=EcoGene:EG40002 EMBL CDS 1050027 1050530 . + 0 ID=.2153;gene=insB1;locus_tag=b0988;gene_synonym=ECK0022;function=IS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;codon_start=1;transl_table=11;product=IS1 transposase B;protein_id=AAC74073.1;db_xref=GI:1787223;db_xref=ASAP:ABE-0003338;db_xref=UniProtKB/Swiss-Prot:P57998;db_xref=EcoGene:EG40002 EMBL gene 1050963 1051175 . - . ID=.2154;gene=cspH;locus_tag=b0989;gene_synonym=cspK;gene_synonym=ECK0979;gene_synonym=JW5134;db_xref=EcoGene:EG14281 EMBL CDS 1050963 1051175 . - 0 ID=.2155;gene=cspH;locus_tag=b0989;gene_synonym=cspK;gene_synonym=ECK0979;gene_synonym=JW5134;function=phenotype%3B Not classified;note=cold shock-like protein%3B GO_process: GO:0009266 - response to temperature stimulus;codon_start=1;transl_table=11;product=stress protein%2C member of the CspA-family;protein_id=AAC74074.1;db_xref=GI:2367112;db_xref=ASAP:ABE-0003341;db_xref=UniProtKB/Swiss-Prot:P0A982;db_xref=EcoGene:EG14281 EMBL gene 1051461 1051673 . + . ID=.2156;gene=cspG;locus_tag=b0990;gene_synonym=cspI;gene_synonym=ECK0980;gene_synonym=JW0974;db_xref=EcoGene:EG14243 EMBL CDS 1051461 1051673 . + 0 ID=.2157;gene=cspG;locus_tag=b0990;gene_synonym=cspI;gene_synonym=ECK0980;gene_synonym=JW0974;function=phenotype%3B Not classified;note=homolog of Salmonella cold shock protein%3B GO_process: GO:0009266 - response to temperature stimulus;codon_start=1;transl_table=11;product=cold shock protein homolog%2C cold-inducible;protein_id=AAC74075.1;db_xref=GI:2367114;db_xref=ASAP:ABE-0003346;db_xref=UniProtKB/Swiss-Prot:P0A978;db_xref=EcoGene:EG14243 EMBL gene 1051847 1052077 . + . ID=.2158;gene=ymcE;locus_tag=b0991;gene_synonym=ECK0981;gene_synonym=JW0975;gene_synonym=sfa;db_xref=EcoGene:EG13232 EMBL CDS 1051847 1052077 . + 0 ID=.2159;gene=ymcE;locus_tag=b0991;gene_synonym=ECK0981;gene_synonym=JW0975;gene_synonym=sfa;function=phenotype%3B Not classified;note=suppresses fabA and ts growth mutation;codon_start=1;transl_table=11;product=cold shock gene;protein_id=AAC74076.1;db_xref=GI:1787225;db_xref=ASAP:ABE-0003349;db_xref=UniProtKB/Swiss-Prot:P0AAA5;db_xref=EcoGene:EG13232 EMBL gene 1052067 1052240 . + . ID=.2160;gene=gnsA;locus_tag=b4517;gene_synonym=ECK0982;gene_synonym=JW0976;gene_synonym=sfa;gene_synonym=yccL;db_xref=EcoGene:EG13233 EMBL CDS 1052067 1052240 . + 0 ID=.2161;gene=gnsA;locus_tag=b4517;gene_synonym=ECK0982;gene_synonym=JW0976;gene_synonym=sfa;gene_synonym=yccL;note=GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=putative phosphatidylethanolamine synthesis regulator;protein_id=ABD18647.1;db_xref=GI:87081815;db_xref=ASAP:ABE-0285038;db_xref=UniProtKB/Swiss-Prot:P0AC92;db_xref=EcoGene:EG13233 EMBL gene 1052289 1053362 . - . ID=.2162;gene=yccM;locus_tag=b0992;gene_synonym=ECK0983;gene_synonym=JW0977;db_xref=EcoGene:EG13234 EMBL CDS 1052289 1053362 . - 0 ID=.2163;gene=yccM;locus_tag=b0992;gene_synonym=ECK0983;gene_synonym=JW0977;codon_start=1;transl_table=11;product=putative 4Fe-4S membrane protein;protein_id=AAC74077.1;db_xref=GI:1787226;db_xref=ASAP:ABE-0003351;db_xref=UniProtKB/Swiss-Prot:P52636;db_xref=EcoGene:EG13234 EMBL gene 1053434 1056178 . - . ID=.2164;gene=torS;locus_tag=b0993;gene_synonym=ECK0984;gene_synonym=JW5135;gene_synonym=yccI;db_xref=EcoGene:EG12617 EMBL CDS 1053434 1056178 . - 0 ID=.2165;gene=torS;locus_tag=b0993;gene_synonym=ECK0984;gene_synonym=JW5135;gene_synonym=yccI;function=enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=hybrid sensory histidine kinase in two-component regulatory system with TorR;protein_id=AAC74078.2;db_xref=GI:87081816;db_xref=ASAP:ABE-0003354;db_xref=UniProtKB/Swiss-Prot:P39453;db_xref=EcoGene:EG12617 EMBL gene 1056261 1057289 . + . ID=.2166;gene=torT;locus_tag=b0994;gene_synonym=ECK0985;gene_synonym=JW0979;gene_synonym=yccH;db_xref=EcoGene:EG12616 EMBL CDS 1056261 1057289 . + 0 ID=.2167;gene=torT;locus_tag=b0994;gene_synonym=ECK0985;gene_synonym=JW0979;gene_synonym=yccH;function=regulator%3B Energy metabolism%2C carbon: Anaerobic respiration;note=part of regulation of tor operon%2C periplasmic%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=periplasmic sensory protein associated with the TorRS two-component regulatory system;protein_id=AAC74079.1;db_xref=GI:1787228;db_xref=ASAP:ABE-0003360;db_xref=UniProtKB/Swiss-Prot:P38683;db_xref=EcoGene:EG12616 EMBL gene 1057262 1057954 . - . ID=.2168;gene=torR;locus_tag=b0995;gene_synonym=ECK0986;gene_synonym=JW0980;db_xref=EcoGene:EG12615 EMBL CDS 1057262 1057954 . - 0 ID=.2169;gene=torR;locus_tag=b0995;gene_synonym=ECK0986;gene_synonym=JW0980;function=regulator%3B Energy metabolism%2C carbon: Anaerobic respiration;experiment=N-terminus verified by Edman degradation: PMID 8083154;note=response transcriptional regulator for torA (sensor TorS)%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=response regulator in two-component regulatory system with TorS;protein_id=AAC74080.1;db_xref=GI:1787229;db_xref=ASAP:ABE-0003362;db_xref=UniProtKB/Swiss-Prot:P38684;db_xref=EcoGene:EG12615 EMBL gene 1058084 1059256 . + . ID=.2170;gene=torC;locus_tag=b0996;gene_synonym=ECK0987;gene_synonym=JW0981;db_xref=EcoGene:EG11815 EMBL CDS 1058084 1059256 . + 0 ID=.2171;gene=torC;locus_tag=b0996;gene_synonym=ECK0987;gene_synonym=JW0981;function=enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;note=trimethylamine N-oxide reductase%2C cytochrome c-type subunit%3B GO_component: GO:0042597 - periplasmic space%3B GO_function: GO:0009055 - electron carrier activity%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0017004 - cytochrome complex assembly%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=trimethylamine N-oxide (TMAO) reductase I%2C cytochrome c-type subunit;protein_id=AAC74081.1;db_xref=GI:1787230;db_xref=ASAP:ABE-0003370;db_xref=UniProtKB/Swiss-Prot:P33226;db_xref=EcoGene:EG11815 EMBL gene 1059256 1061802 . + . ID=.2172;gene=torA;locus_tag=b0997;gene_synonym=ECK0988;gene_synonym=JW0982;db_xref=EcoGene:EG11814 EMBL CDS 1059256 1061802 . + 0 ID=.2173;gene=torA;locus_tag=b0997;gene_synonym=ECK0988;gene_synonym=JW0982;ec_number=1.6.6.9;function=enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;note=trimethylamine N-oxide reductase subunit%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=trimethylamine N-oxide (TMAO) reductase I%2C catalytic subunit;protein_id=AAC74082.1;db_xref=GI:1787231;db_xref=ASAP:ABE-0003372;db_xref=UniProtKB/Swiss-Prot:P33225;db_xref=EcoGene:EG11814 EMBL gene 1061799 1062398 . + . ID=.2174;gene=torD;locus_tag=b0998;gene_synonym=ECK0989;gene_synonym=JW0983;db_xref=EcoGene:EG12195 EMBL CDS 1061799 1062398 . + 0 ID=.2175;gene=torD;locus_tag=b0998;gene_synonym=ECK0989;gene_synonym=JW0983;function=enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;note=part of trimethylamine-N-oxide oxidoreductase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=TorA-maturation chaperone;protein_id=AAC74083.1;db_xref=GI:1787232;db_xref=ASAP:ABE-0003374;db_xref=UniProtKB/Swiss-Prot:P36662;db_xref=EcoGene:EG12195 EMBL repeat_region 1062407 1062540 . + . ID=.2176;note=REP91 (repetitive extragenic palindromic) element%3B contains 3 REP sequences EMBL gene 1062550 1062855 . - . ID=.2177;gene=cbpM;locus_tag=b0999;gene_synonym=ECK0990;gene_synonym=JW0984;gene_synonym=yccD;db_xref=EcoGene:EG12194 EMBL CDS 1062550 1062855 . - 0 ID=.2178;gene=cbpM;locus_tag=b0999;gene_synonym=ECK0990;gene_synonym=JW0984;gene_synonym=yccD;codon_start=1;transl_table=11;product=modulator of CbpA co-chaperone;protein_id=AAC74084.1;db_xref=GI:1787234;db_xref=ASAP:ABE-0003377;db_xref=UniProtKB/Swiss-Prot:P63264;db_xref=EcoGene:EG12194 EMBL gene 1062855 1063775 . - . ID=.2179;gene=cbpA;locus_tag=b1000;gene_synonym=ECK0991;gene_synonym=JW0985;db_xref=EcoGene:EG12193 EMBL CDS 1062855 1063775 . - 0 ID=.2180;gene=cbpA;locus_tag=b1000;gene_synonym=ECK0991;gene_synonym=JW0985;function=factor%3B Chaperones;experiment=N-terminus verified by Edman degradation: PMID 8302830;note=curved DNA-binding protein%3B functions closely related to DnaJ%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=DnaK co-chaperone%3B curved DNA-binding protein;protein_id=AAC74085.1;db_xref=GI:1787235;db_xref=ASAP:ABE-0003379;db_xref=UniProtKB/Swiss-Prot:P36659;db_xref=EcoGene:EG12193 EMBL gene 1064036 1065292 . + . ID=.2181;gene=yccE;locus_tag=b1001;gene_synonym=ECK0992;gene_synonym=JW0986;db_xref=EcoGene:EG12196 EMBL CDS 1064036 1065292 . + 0 ID=.2182;gene=yccE;locus_tag=b1001;gene_synonym=ECK0992;gene_synonym=JW0986;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC74086.1;db_xref=GI:1787236;db_xref=ASAP:ABE-0003384;db_xref=UniProtKB/Swiss-Prot:P36661;db_xref=EcoGene:EG12196 EMBL gene 1065585 1066826 . + . ID=.2183;gene=agp;locus_tag=b1002;gene_synonym=ECK0993;gene_synonym=JW0987;db_xref=EcoGene:EG10033 EMBL CDS 1065585 1066826 . + 0 ID=.2184;gene=agp;locus_tag=b1002;gene_synonym=ECK0993;gene_synonym=JW0987;ec_number=3.1.3.10;function=enzyme%3B Central intermediary metabolism: Pool%2C multipurpose conversions;note=periplasmic glucose-1-phosphatase%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0006006 - glucose metabolic process;codon_start=1;transl_table=11;product=glucose-1-phosphatase/inositol phosphatase;protein_id=AAC74087.1;db_xref=GI:1787237;db_xref=ASAP:ABE-0003388;db_xref=UniProtKB/Swiss-Prot:P19926;db_xref=EcoGene:EG10033 EMBL gene 1066864 1067091 . - . ID=.2185;gene=yccJ;locus_tag=b1003;gene_synonym=ECK0994;gene_synonym=JW0988;db_xref=EcoGene:EG12703 EMBL CDS 1066864 1067091 . - 0 ID=.2186;gene=yccJ;locus_tag=b1003;gene_synonym=ECK0994;gene_synonym=JW0988;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC74088.1;db_xref=GI:1787238;db_xref=ASAP:ABE-0003390;db_xref=UniProtKB/Swiss-Prot:P0AB14;db_xref=EcoGene:EG12703 EMBL gene 1067112 1067708 . - . ID=.2187;gene=wrbA;locus_tag=b1004;gene_synonym=ECK0995;gene_synonym=JW0989;db_xref=EcoGene:EG11540 EMBL CDS 1067112 1067708 . - 0 ID=.2188;gene=wrbA;locus_tag=b1004;gene_synonym=ECK0995;gene_synonym=JW0989;function=enzyme%3B Not classified;note=flavoprotein WrbA (Trp repressor binding protein)%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=NAD(P)H:quinone oxidoreductase;protein_id=AAC74089.1;db_xref=GI:1787239;db_xref=ASAP:ABE-0003392;db_xref=UniProtKB/Swiss-Prot:P0A8G6;db_xref=EcoGene:EG11540 EMBL gene 1068081 1068254 . + . ID=.2189;gene=ymdF;locus_tag=b4518;gene_synonym=ECK0996;gene_synonym=JW5136;db_xref=EcoGene:EG14358 EMBL CDS 1068081 1068254 . + 0 ID=.2190;gene=ymdF;locus_tag=b4518;gene_synonym=ECK0996;gene_synonym=JW5136;note=GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=KGG family protein;protein_id=AAC74090.2;db_xref=GI:87081817;db_xref=ASAP:ABE-0285039;db_xref=UniProtKB/Swiss-Prot:P56614;db_xref=EcoGene:EG14358 EMBL repeat_region 1068354 1068451 . + . ID=.2191;note=RIP92 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 1068511 1069839 . - . ID=.2192;gene=rutG;locus_tag=b1006;gene_synonym=ECK0997;gene_synonym=JW5137;gene_synonym=ycdG;db_xref=EcoGene:EG13853 EMBL CDS 1068511 1069839 . - 0 ID=.2193;gene=rutG;locus_tag=b1006;gene_synonym=ECK0997;gene_synonym=JW5137;gene_synonym=ycdG;function=transport%3B Pyrimidine nitrogen catabolism;note=putative transport protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=pyrimidine permease;protein_id=AAC74091.2;db_xref=GI:87081818;db_xref=ASAP:ABE-0003401;db_xref=UniProtKB/Swiss-Prot:P75892;db_xref=EcoGene:EG13853 EMBL gene 1069860 1070354 . - . ID=.2194;gene=rutF;locus_tag=b1007;gene_synonym=ECK0998;gene_synonym=JW5138;gene_synonym=ycdH;db_xref=EcoGene:EG13854 EMBL CDS 1069860 1070354 . - 0 ID=.2195;gene=rutF;locus_tag=b1007;gene_synonym=ECK0998;gene_synonym=JW5138;gene_synonym=ycdH;function=enzyme%3B Pyrimidine nitrogen catabolism;codon_start=1;transl_table=11;product=flavin:NADH reductase;protein_id=AAC74092.2;db_xref=GI:87081819;db_xref=ASAP:ABE-0003403;db_xref=UniProtKB/Swiss-Prot:P75893;db_xref=EcoGene:EG13854 EMBL gene 1070365 1070955 . - . ID=.2196;gene=rutE;locus_tag=b1008;gene_synonym=ECK0999;gene_synonym=JW0993;gene_synonym=ycdI;db_xref=EcoGene:EG13855 EMBL CDS 1070365 1070955 . - 0 ID=.2197;gene=rutE;locus_tag=b1008;gene_synonym=ECK0999;gene_synonym=JW0993;gene_synonym=ycdI;function=enzyme%3B Pyrimidine nitrogen catabolism;codon_start=1;transl_table=11;product=putative malonic semialdehyde reductase;protein_id=AAC74093.1;db_xref=GI:1787243;db_xref=ASAP:ABE-0003407;db_xref=UniProtKB/Swiss-Prot:P75894;db_xref=EcoGene:EG13855 EMBL gene 1070965 1071765 . - . ID=.2198;gene=rutD;locus_tag=b1009;gene_synonym=ECK1000;gene_synonym=JW0994;gene_synonym=ycdJ;db_xref=EcoGene:EG13856 EMBL CDS 1070965 1071765 . - 0 ID=.2199;gene=rutD;locus_tag=b1009;gene_synonym=ECK1000;gene_synonym=JW0994;gene_synonym=ycdJ;function=enzyme%3B Pyrimidine nitrogen catabolism;codon_start=1;transl_table=11;product=putative reactive intermediate detoxifying aminoacrylate hydrolase;protein_id=AAC74094.1;db_xref=GI:1787244;db_xref=ASAP:ABE-0003410;db_xref=UniProtKB/Swiss-Prot:P75895;db_xref=EcoGene:EG13856 EMBL gene 1071773 1072159 . - . ID=.2200;gene=rutC;locus_tag=b1010;gene_synonym=ECK1001;gene_synonym=JW0995;gene_synonym=ycdK;db_xref=EcoGene:EG13857 EMBL CDS 1071773 1072159 . - 0 ID=.2201;gene=rutC;locus_tag=b1010;gene_synonym=ECK1001;gene_synonym=JW0995;gene_synonym=ycdK;function=enzyme%3B Pyrimidine nitrogen catabolism;codon_start=1;transl_table=11;product=putative aminoacrylate deaminase%2C reactive intermediate detoxification%3B weak enamine/imine deaminase activity;protein_id=AAC74095.1;db_xref=GI:1787245;db_xref=ASAP:ABE-0003412;db_xref=UniProtKB/Swiss-Prot:P0AFQ5;db_xref=EcoGene:EG13857 EMBL gene 1072171 1072863 . - . ID=.2202;gene=rutB;locus_tag=b1011;gene_synonym=ECK1002;gene_synonym=JW5139;gene_synonym=ycdL;db_xref=EcoGene:EG13858 EMBL CDS 1072171 1072863 . - 0 ID=.2203;gene=rutB;locus_tag=b1011;gene_synonym=ECK1002;gene_synonym=JW5139;gene_synonym=ycdL;function=enzyme%3B Pyrimidine nitrogen catabolism;codon_start=1;transl_table=11;product=ureidoacrylate amidohydrolase;protein_id=AAC74096.2;db_xref=GI:87081820;db_xref=ASAP:ABE-0003414;db_xref=UniProtKB/Swiss-Prot:P75897;db_xref=EcoGene:EG13858 EMBL gene 1072863 1074011 . - . ID=.2204;gene=rutA;locus_tag=b1012;gene_synonym=ECK1003;gene_synonym=JW0997;gene_synonym=ycdM;db_xref=EcoGene:EG13859 EMBL CDS 1072863 1074011 . - 0 ID=.2205;gene=rutA;locus_tag=b1012;gene_synonym=ECK1003;gene_synonym=JW0997;gene_synonym=ycdM;function=enzyme%3B Pyrimidine nitrogen catabolism;codon_start=1;transl_table=11;product=pyrimidine oxygenase%2C FMN-dependent;protein_id=AAC74097.1;db_xref=GI:1787247;db_xref=ASAP:ABE-0003416;db_xref=UniProtKB/Swiss-Prot:P75898;db_xref=EcoGene:EG13859 EMBL gene 1074242 1074880 . + . ID=.2206;gene=rutR;locus_tag=b1013;gene_synonym=ECK1004;gene_synonym=JW0998;gene_synonym=ycdC;db_xref=EcoGene:EG12301 EMBL CDS 1074242 1074880 . + 0 ID=.2207;gene=rutR;locus_tag=b1013;gene_synonym=ECK1004;gene_synonym=JW0998;gene_synonym=ycdC;function=regulator%3B Pyrimidine nitrogen catabolism;note=hypothetical transcriptional regulator%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=rut operon transcriptional repressor for;protein_id=AAC74098.1;db_xref=GI:1787249;db_xref=ASAP:ABE-0003422;db_xref=UniProtKB/Swiss-Prot:P0ACU2;db_xref=EcoGene:EG12301 EMBL repeat_region 1074885 1074912 . + . ID=.2208;note=REP93 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 1074920 1078882 . - . ID=.2209;gene=putA;locus_tag=b1014;gene_synonym=ECK1005;gene_synonym=JW0999;gene_synonym=poaA;gene_synonym=putC;db_xref=EcoGene:EG10801 EMBL CDS 1074920 1078882 . - 0 ID=.2210;gene=putA;locus_tag=b1014;gene_synonym=ECK1005;gene_synonym=JW0999;gene_synonym=poaA;gene_synonym=putC;ec_number=1.2.1.88;ec_number=1.5.5.2;function=enzyme%3B Degradation of small molecules: Amino acids;note=proline dehydrogenase%2C P5C dehydrogenase%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0009063 - cellular amino acid catabolic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=fused DNA-binding transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase;protein_id=AAC74099.1;db_xref=GI:1787250;db_xref=ASAP:ABE-0003424;db_xref=UniProtKB/Swiss-Prot:P09546;db_xref=EcoGene:EG10801 EMBL gene 1079305 1080813 . + . ID=.2211;gene=putP;locus_tag=b1015;gene_synonym=ECK1006;gene_synonym=JW1001;gene_synonym=putC;db_xref=EcoGene:EG10802 EMBL CDS 1079305 1080813 . + 0 ID=.2212;gene=putP;locus_tag=b1015;gene_synonym=ECK1006;gene_synonym=JW1001;gene_synonym=putC;function=transport%3B Transport of small molecules: Cations;experiment=N-terminus verified by Edman degradation: PMID 1567896;note=major sodium/proline symporter%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_function: GO:0005298 - proline:sodium symporter activity%3B GO_process: GO:0006561 - proline biosynthetic process;codon_start=1;transl_table=11;product=proline:sodium symporter;protein_id=AAC74100.1;db_xref=GI:1787251;db_xref=ASAP:ABE-0003433;db_xref=UniProtKB/Swiss-Prot:P07117;db_xref=EcoGene:EG10802 EMBL repeat_region 1081112 1081145 . + . ID=.2213;note=REP94 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 1081356 1082185 . + . ID=.2214;gene=efeU;locus_tag=b4490;gene_synonym=ECK1007;gene_synonym=JW1002;gene_synonym=JW5141;gene_synonym=ycdN;pseudo=true;db_xref=EcoGene:EG13860 EMBL biological_region 1081356 1082185 . + 0 ID=.2215;featflags=type:CDS;gene=efeU;locus_tag=b4490;gene_synonym=ECK1007;gene_synonym=JW1002;gene_synonym=JW5141;gene_synonym=ycdN;note=ferrous iron permease (pseudogene);pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0003441;db_xref=ASAP:ABE-0003443;db_xref=ASAP:ABE-0285091;db_xref=UniProtKB/Swiss-Prot:P75901;db_xref=EcoGene:EG13860 EMBL CDS 1081356 1081460 . + 0 Parent=.2215 EMBL CDS 1081460 1082185 . + 0 Parent=.2215 EMBL gene 1082243 1083370 . + . ID=.2218;gene=efeO;locus_tag=b1018;gene_synonym=ECK1008;gene_synonym=JW1003;gene_synonym=ycdO;db_xref=EcoGene:EG13861 EMBL CDS 1082243 1083370 . + 0 ID=.2219;gene=efeO;locus_tag=b1018;gene_synonym=ECK1008;gene_synonym=JW1003;gene_synonym=ycdO;codon_start=1;transl_table=11;product=inactive ferrous ion transporter EfeUOB;protein_id=AAC74103.1;db_xref=GI:1787254;db_xref=ASAP:ABE-0003448;db_xref=UniProtKB/Swiss-Prot:P0AB24;db_xref=EcoGene:EG13861 EMBL gene 1083376 1084647 . + . ID=.2220;gene=efeB;locus_tag=b1019;gene_synonym=ECK1009;gene_synonym=JW1004;gene_synonym=ycdB;db_xref=EcoGene:EG11735 EMBL CDS 1083376 1084647 . + 0 ID=.2221;gene=efeB;locus_tag=b1019;gene_synonym=ECK1009;gene_synonym=JW1004;gene_synonym=ycdB;codon_start=1;transl_table=11;product=deferrrochelatase%2C periplasmic;protein_id=AAC74104.1;db_xref=GI:1787255;db_xref=ASAP:ABE-0003451;db_xref=UniProtKB/Swiss-Prot:P31545;db_xref=EcoGene:EG11735 EMBL repeat_region 1084682 1084767 . + . ID=.2222;note=REP95 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 1084992 1086056 . + . ID=.2223;gene=phoH;locus_tag=b1020;gene_synonym=ECK1010;gene_synonym=JW1005;gene_synonym=psiH;db_xref=EcoGene:EG11734 EMBL CDS 1084992 1086056 . + 0 ID=.2224;gene=phoH;locus_tag=b1020;gene_synonym=ECK1010;gene_synonym=JW1005;gene_synonym=psiH;function=regulator%3B Central intermediary metabolism: Phosphorus compounds;experiment=N-terminus verified by Edman degradation: PMID 8444794;note=PhoB-dependent%2C ATP-binding pho regulon component%3B may be helicase%3B induced by P starvation%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006793 - phosphorus metabolic process%3B GO_process: GO:0042594 - response to starvation;codon_start=1;transl_table=11;product=ATP-binding protein%3B putative PhoH family P-loop ATPase;protein_id=AAC74105.1;db_xref=GI:1787257;db_xref=ASAP:ABE-0003458;db_xref=UniProtKB/Swiss-Prot:P0A9K1;db_xref=EcoGene:EG11734 EMBL gene 1086106 1086519 . - . ID=.2225;gene=pgaD;locus_tag=b1021;gene_synonym=ECK1011;gene_synonym=hmsS;gene_synonym=JW1006;gene_synonym=ycdP;db_xref=EcoGene:EG13862 EMBL CDS 1086106 1086519 . - 0 ID=.2226;gene=pgaD;locus_tag=b1021;gene_synonym=ECK1011;gene_synonym=hmsS;gene_synonym=JW1006;gene_synonym=ycdP;function=enzyme%3B Surface polysaccharides and antigens;note=GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=biofilm PGA synthase PgaCD%2C regulatory subunit%3B c-di-GMP-stimulated activity and dimerization;protein_id=AAC74106.1;db_xref=GI:1787258;db_xref=ASAP:ABE-0003460;db_xref=UniProtKB/Swiss-Prot:P69432;db_xref=EcoGene:EG13862 EMBL gene 1086521 1087846 . - . ID=.2227;gene=pgaC;locus_tag=b1022;gene_synonym=ECK1012;gene_synonym=hmsR;gene_synonym=JW1007;gene_synonym=ycdQ;db_xref=EcoGene:EG13863 EMBL CDS 1086521 1087846 . - 0 ID=.2228;gene=pgaC;locus_tag=b1022;gene_synonym=ECK1012;gene_synonym=hmsR;gene_synonym=JW1007;gene_synonym=ycdQ;function=enzyme%3B Surface polysaccharides and antigens;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=biofilm PGA synthase PgaCD%2C catalytic subunit%3B poly-beta-1%2C6-N-acetyl-D-glucosamine synthase;protein_id=AAC74107.1;db_xref=GI:1787259;db_xref=ASAP:ABE-0003464;db_xref=UniProtKB/Swiss-Prot:P75905;db_xref=EcoGene:EG13863 EMBL gene 1087839 1089857 . - . ID=.2229;gene=pgaB;locus_tag=b1023;gene_synonym=ECK1013;gene_synonym=JW5142;gene_synonym=ycdR;db_xref=EcoGene:EG13864 EMBL CDS 1087839 1089857 . - 0 ID=.2230;gene=pgaB;locus_tag=b1023;gene_synonym=ECK1013;gene_synonym=JW5142;gene_synonym=ycdR;function=transport%3B Surface polysaccharides %26 antigens;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=poly-beta-1%2C6-N-acetyl-D-glucosamine (PGA) N-deacetylase outer membrane export lipoprotein;protein_id=AAC74108.1;db_xref=GI:1787260;db_xref=ASAP:ABE-0003467;db_xref=UniProtKB/Swiss-Prot:P75906;db_xref=EcoGene:EG13864 EMBL gene 1089866 1092289 . - . ID=.2231;gene=pgaA;locus_tag=b1024;gene_synonym=ECK1014;gene_synonym=JW1010;gene_synonym=ycdS;db_xref=EcoGene:EG13865 EMBL CDS 1089866 1092289 . - 0 ID=.2232;gene=pgaA;locus_tag=b1024;gene_synonym=ECK1014;gene_synonym=JW1010;gene_synonym=ycdS;function=transport%3B Surface polysaccharides %26 antigens;note=putative outer membrane protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane;codon_start=1;transl_table=11;product=biofilm adhesin polysaccharide PGA secretin%3B OM porin%3B poly-beta-1%2C6-N-acetyl-D-glucosamine export protein;protein_id=AAC74109.1;db_xref=GI:1787261;db_xref=ASAP:ABE-0003469;db_xref=UniProtKB/Swiss-Prot:P69434;db_xref=EcoGene:EG13865 EMBL gene 1092876 1094234 . + . ID=.2233;gene=ycdT;locus_tag=b1025;gene_synonym=ECK1015;gene_synonym=JW5143;db_xref=EcoGene:EG13866 EMBL CDS 1092876 1094234 . + 0 ID=.2234;gene=ycdT;locus_tag=b1025;gene_synonym=ECK1015;gene_synonym=JW5143;codon_start=1;transl_table=11;product=diguanylate cyclase%2C membrane-anchored;protein_id=AAC74110.1;db_xref=GI:1787262;db_xref=ASAP:ABE-0003472;db_xref=UniProtKB/Swiss-Prot:P75908;db_xref=EcoGene:EG13866 EMBL sequence_feature 1094245 1095502 . - . ID=.2235;note=*mobile_element_type: insertion sequence:IS3D EMBL gene 1094275 1095141 . - . ID=.2236;gene=insF1;locus_tag=b1026;gene_synonym=ECK0299;db_xref=EcoGene:EG40006 EMBL CDS 1094275 1095141 . - 0 ID=.2237;gene=insF1;locus_tag=b1026;gene_synonym=ECK0299;function=IS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;codon_start=1;transl_table=11;product=IS3 transposase B;protein_id=AAC74111.1;db_xref=GI:1787263;db_xref=ASAP:ABE-0003475;db_xref=UniProtKB/Swiss-Prot:P0CF82;db_xref=EcoGene:EG40006 EMBL gene 1095138 1095437 . - . ID=.2238;gene=insE1;locus_tag=b1027;gene_synonym=ECK0298;db_xref=EcoGene:EG40005 EMBL CDS 1095138 1095437 . - 0 ID=.2239;gene=insE1;locus_tag=b1027;gene_synonym=ECK0298;function=IS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;codon_start=1;transl_table=11;product=IS3 transposase A;protein_id=AAC74112.2;db_xref=GI:226510933;db_xref=ASAP:ABE-0003477;db_xref=UniProtKB/Swiss-Prot:P0CF69;db_xref=EcoGene:EG40005 EMBL gene 1095505 1095846 . + . ID=.2240;gene=ymdE;locus_tag=b1028;gene_synonym=ECK1016;gene_synonym=JW5145;pseudo=true;db_xref=EcoGene:EG14357 EMBL CDS 1095505 1095846 . + 0 ID=.2241;gene=ymdE;locus_tag=b1028;gene_synonym=ECK1016;gene_synonym=JW5145;note=pseudogene;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0003486;db_xref=UniProtKB/Swiss-Prot:Q7DFV4;db_xref=EcoGene:EG14357 EMBL gene 1095843 1096829 . + . ID=.2242;gene=ycdU;locus_tag=b1029;gene_synonym=ECK1017;gene_synonym=JW1015;db_xref=EcoGene:EG13867 EMBL CDS 1095843 1096829 . + 0 ID=.2243;gene=ycdU;locus_tag=b1029;gene_synonym=ECK1017;gene_synonym=JW1015;codon_start=1;transl_table=11;product=putative inner membrane protein;protein_id=AAC74114.1;db_xref=GI:1787267;db_xref=ASAP:ABE-0003489;db_xref=UniProtKB/Swiss-Prot:P75910;db_xref=EcoGene:EG13867 EMBL gene 1097565 1097652 . - . ID=.2244;gene=serX;locus_tag=b1032;gene_synonym=ECK1018;gene_synonym=JWR0027;db_xref=EcoGene:EG30097 EMBL tRNA 1097565 1097652 . - . ID=.2245;gene=serX;locus_tag=b1032;gene_synonym=ECK1018;gene_synonym=JWR0027;product=tRNA-Ser;note=anticodon: GGA;db_xref=ASAP:ABE-0003498;db_xref=EcoGene:EG30097 EMBL gene 1097886 1098824 . + . ID=.2246;gene=ghrA;locus_tag=b1033;gene_synonym=ECK1019;gene_synonym=JW5146;gene_synonym=ycdW;db_xref=EcoGene:EG13869 EMBL CDS 1097886 1098824 . + 0 ID=.2247;gene=ghrA;locus_tag=b1033;gene_synonym=ECK1019;gene_synonym=JW5146;gene_synonym=ycdW;ec_number=1.1.1.79;function=enzyme%3B Not classified;experiment=N-terminus verified by Edman degradation: PMID 11237876;note=putative dehydrogenase;codon_start=1;transl_table=11;product=glyoxylate/hydroxypyruvate reductase A;protein_id=AAC74117.2;db_xref=GI:87081824;db_xref=ASAP:ABE-0003503;db_xref=UniProtKB/Swiss-Prot:P75913;db_xref=EcoGene:EG13869 EMBL gene 1098879 1099616 . + . ID=.2248;gene=ycdX;locus_tag=b1034;gene_synonym=ECK1020;gene_synonym=JW1017;db_xref=EcoGene:EG13870 EMBL CDS 1098879 1099616 . + 0 ID=.2249;gene=ycdX;locus_tag=b1034;gene_synonym=ECK1020;gene_synonym=JW1017;function=enzyme%3B Central intermediary metabolism: Phosphorus compounds;note=GO_process: GO:0006261 - DNA-dependent DNA replication;codon_start=1;transl_table=11;product=alkaline phosphatase;protein_id=AAC74118.1;db_xref=GI:1787271;db_xref=ASAP:ABE-0003508;db_xref=UniProtKB/Swiss-Prot:P75914;db_xref=EcoGene:EG13870 EMBL gene 1099640 1100194 . + . ID=.2250;gene=ycdY;locus_tag=b1035;gene_synonym=ECK1021;gene_synonym=JW1018;db_xref=EcoGene:EG13871 EMBL CDS 1099640 1100194 . + 0 ID=.2251;gene=ycdY;locus_tag=b1035;gene_synonym=ECK1021;gene_synonym=JW1018;function=putative enzyme%3B Not classified;note=putative oxidoreductase component;codon_start=1;transl_table=11;product=redox enzyme maturation protein (REMP) chaperone for YcdX;protein_id=AAC74119.1;db_xref=GI:1787272;db_xref=ASAP:ABE-0003511;db_xref=UniProtKB/Swiss-Prot:P75915;db_xref=EcoGene:EG13871 EMBL gene 1100296 1100787 . + . ID=.2252;gene=ycdZ;locus_tag=b1036;gene_synonym=ECK1022;gene_synonym=JW5147;gene_synonym=nupT;db_xref=EcoGene:EG13872 EMBL CDS 1100296 1100787 . + 0 ID=.2253;gene=ycdZ;locus_tag=b1036;gene_synonym=ECK1022;gene_synonym=JW5147;gene_synonym=nupT;codon_start=1;transl_table=11;product=DUF1097 family inner membrane protein;protein_id=AAC74120.2;db_xref=GI:87081825;db_xref=ASAP:ABE-0003514;db_xref=UniProtKB/Swiss-Prot:P75916;db_xref=EcoGene:EG13872 EMBL repeat_region 1100821 1100839 . + . ID=.2254;note=REP96 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 1100851 1101684 . - . ID=.2255;gene=csgG;locus_tag=b1037;gene_synonym=agfG;gene_synonym=ECK1023;gene_synonym=JW1020;db_xref=EcoGene:EG13413 EMBL CDS 1100851 1101684 . - 0 ID=.2256;gene=csgG;locus_tag=b1037;gene_synonym=agfG;gene_synonym=ECK1023;gene_synonym=JW1020;function=structural component%3B Surface structures;note=curli production assembly/transport component%2C 2nd curli operon%3B GO_component: GO:0009289 - pilus%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane;codon_start=1;transl_table=11;product=curli production assembly/transport outer membrane lipoprotein;protein_id=AAC74121.1;db_xref=GI:1787274;db_xref=ASAP:ABE-0003516;db_xref=UniProtKB/Swiss-Prot:P0AEA2;db_xref=EcoGene:EG13413 EMBL gene 1101711 1102127 . - . ID=.2257;gene=csgF;locus_tag=b1038;gene_synonym=agfF;gene_synonym=ECK1024;gene_synonym=JW1021;db_xref=EcoGene:EG13412 EMBL CDS 1101711 1102127 . - 0 ID=.2258;gene=csgF;locus_tag=b1038;gene_synonym=agfF;gene_synonym=ECK1024;gene_synonym=JW1021;function=structural component%3B Surface structures;note=curli production assembly/transport component%2C 2nd curli operon%3B GO_component: GO:0009289 - pilus;codon_start=1;transl_table=11;product=curli nucleation outer membrane protein;protein_id=AAC74122.1;db_xref=GI:1787275;db_xref=ASAP:ABE-0003519;db_xref=UniProtKB/Swiss-Prot:P0AE98;db_xref=EcoGene:EG13412 EMBL gene 1102152 1102541 . - . ID=.2259;gene=csgE;locus_tag=b1039;gene_synonym=agfE;gene_synonym=ECK1025;gene_synonym=JW1022;db_xref=EcoGene:EG13411 EMBL CDS 1102152 1102541 . - 0 ID=.2260;gene=csgE;locus_tag=b1039;gene_synonym=agfE;gene_synonym=ECK1025;gene_synonym=JW1022;function=structural component%3B Surface structures;note=curli production assembly/transport component%2C 2nd curli operon%3B GO_component: GO:0009289 - pilus;codon_start=1;transl_table=11;product=curlin secretion specificity factor;protein_id=AAC74123.1;db_xref=GI:1787276;db_xref=ASAP:ABE-0003528;db_xref=UniProtKB/Swiss-Prot:P0AE95;db_xref=EcoGene:EG13411 EMBL gene 1102546 1103196 . - . ID=.2261;gene=csgD;locus_tag=b1040;gene_synonym=agfD;gene_synonym=ECK1026;gene_synonym=JW1023;db_xref=EcoGene:EG13410 EMBL CDS 1102546 1103196 . - 0 ID=.2262;gene=csgD;locus_tag=b1040;gene_synonym=agfD;gene_synonym=ECK1026;gene_synonym=JW1023;function=putative regulator%3B Not classified;note=putative 2-component transcriptional regulator for 2nd curli operon%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=csgBAC operon transcriptional regulator;protein_id=AAC74124.1;db_xref=GI:1787277;db_xref=ASAP:ABE-0003530;db_xref=UniProtKB/Swiss-Prot:P52106;db_xref=EcoGene:EG13410 EMBL gene 1103951 1104406 . + . ID=.2263;gene=csgB;locus_tag=b1041;gene_synonym=agfB;gene_synonym=ECK1027;gene_synonym=JW1024;db_xref=EcoGene:EG12621 EMBL CDS 1103951 1104406 . + 0 ID=.2264;gene=csgB;locus_tag=b1041;gene_synonym=agfB;gene_synonym=ECK1027;gene_synonym=JW1024;function=structural component%3B Surface structures;note=minor curlin subunit precursor%2C similar ro CsgA%3B GO_component: GO:0009289 - pilus%3B GO_component: GO:0009279 - cell outer membrane%3B GO_process: GO:0009101 - glycoprotein biosynthetic process;codon_start=1;transl_table=11;product=curlin nucleator protein%2C minor subunit in curli complex;protein_id=AAC74125.1;db_xref=GI:1787278;db_xref=ASAP:ABE-0003534;db_xref=UniProtKB/Swiss-Prot:P0ABK7;db_xref=EcoGene:EG12621 EMBL gene 1104447 1104902 . + . ID=.2265;gene=csgA;locus_tag=b1042;gene_synonym=agfA;gene_synonym=ECK1028;gene_synonym=JW1025;db_xref=EcoGene:EG11489 EMBL CDS 1104447 1104902 . + 0 ID=.2266;gene=csgA;locus_tag=b1042;gene_synonym=agfA;gene_synonym=ECK1028;gene_synonym=JW1025;function=regulator%3B Surface structures;note=curlin major subunit%2C coiled surface structures%3B cryptic%3B GO_component: GO:0009289 - pilus%3B GO_component: GO:0009279 - cell outer membrane%3B GO_process: GO:0009101 - glycoprotein biosynthetic process;codon_start=1;transl_table=11;product=curlin subunit%2C amyloid curli fibers%2C cryptic;protein_id=AAC74126.1;db_xref=GI:1787279;db_xref=ASAP:ABE-0003537;db_xref=UniProtKB/Swiss-Prot:P28307;db_xref=EcoGene:EG11489 EMBL gene 1104961 1105293 . + . ID=.2267;gene=csgC;locus_tag=b1043;gene_synonym=agfC;gene_synonym=ECK1029;gene_synonym=JW1026;gene_synonym=ycdE;db_xref=EcoGene:EG13414 EMBL CDS 1104961 1105293 . + 0 ID=.2268;gene=csgC;locus_tag=b1043;gene_synonym=agfC;gene_synonym=ECK1029;gene_synonym=JW1026;gene_synonym=ycdE;function=putative structure%3B Not classified;note=putative curli production protein%3B GO_component: GO:0009289 - pilus;codon_start=1;transl_table=11;product=curli assembly protein;protein_id=AAC74127.1;db_xref=GI:1787280;db_xref=ASAP:ABE-0003542;db_xref=UniProtKB/Swiss-Prot:P52107;db_xref=EcoGene:EG13414 EMBL gene 1105414 1105725 . + . ID=.2269;gene=ymdA;locus_tag=b1044;gene_synonym=ECK1030;gene_synonym=JW1031;db_xref=EcoGene:EG13873 EMBL CDS 1105414 1105725 . + 0 ID=.2270;gene=ymdA;locus_tag=b1044;gene_synonym=ECK1030;gene_synonym=JW1031;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC74128.1;db_xref=GI:1787281;db_xref=ASAP:ABE-0003545;db_xref=UniProtKB/Swiss-Prot:P75917;db_xref=EcoGene:EG13873 EMBL gene 1105820 1106353 . + . ID=.2271;gene=ymdB;locus_tag=b1045;gene_synonym=ECK1031;gene_synonym=JW1032;db_xref=EcoGene:EG13874 EMBL CDS 1105820 1106353 . + 0 ID=.2272;gene=ymdB;locus_tag=b1045;gene_synonym=ECK1031;gene_synonym=JW1032;note=putative polyprotein;codon_start=1;transl_table=11;product=O-acetyl-ADP-ribose deacetylase%3B RNase III inhibitor during cold shock%3B putative cardiolipin synthase C regulatory subunit;protein_id=AAC74129.1;db_xref=GI:1787283;db_xref=ASAP:ABE-0003549;db_xref=UniProtKB/Swiss-Prot:P0A8D6;db_xref=EcoGene:EG13874 EMBL gene 1106355 1107776 . + . ID=.2273;gene=clsC;locus_tag=b1046;gene_synonym=ECK1032;gene_synonym=JW5150;gene_synonym=ymdC;db_xref=EcoGene:EG13875 EMBL CDS 1106355 1107776 . + 0 ID=.2274;gene=clsC;locus_tag=b1046;gene_synonym=ECK1032;gene_synonym=JW5150;gene_synonym=ymdC;function=Enzyme%3B Macromolecule synthesis: Phospholipids;note=putative synthase;codon_start=1;transl_table=11;product=stationary phase cardiolipin synthase 3;protein_id=AAC74130.2;db_xref=GI:87081826;db_xref=ASAP:ABE-0003551;db_xref=UniProtKB/Swiss-Prot:P75919;db_xref=EcoGene:EG13875 EMBL gene 1107784 1108941 . - . ID=.2275;gene=opgC;locus_tag=b1047;gene_synonym=ECK1033;gene_synonym=JW1034;gene_synonym=mdoC;gene_synonym=ymdD;db_xref=EcoGene:EG13876 EMBL CDS 1107784 1108941 . - 0 ID=.2276;gene=opgC;locus_tag=b1047;gene_synonym=ECK1033;gene_synonym=JW1034;gene_synonym=mdoC;gene_synonym=ymdD;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009250 - glucan biosynthetic process%3B GO_process: GO:0006970 - response to osmotic stress;codon_start=1;transl_table=11;product=OPG biosynthetic transmembrane succinyltransferase;protein_id=AAC74131.1;db_xref=GI:1787285;db_xref=ASAP:ABE-0003553;db_xref=UniProtKB/Swiss-Prot:P75920;db_xref=EcoGene:EG13876 EMBL gene 1109335 1110870 . + . ID=.2277;gene=opgG;locus_tag=b1048;gene_synonym=ECK1034;gene_synonym=JW1035;gene_synonym=mdoA;gene_synonym=mdoG;db_xref=EcoGene:EG11885 EMBL CDS 1109335 1110870 . + 0 ID=.2278;gene=opgG;locus_tag=b1048;gene_synonym=ECK1034;gene_synonym=JW1035;gene_synonym=mdoA;gene_synonym=mdoG;function=enzyme%3B Osmoregulated periplasmic glucan (OPG) biosynthesis;note=periplasmic glucans biosynthesis protein%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0009250 - glucan biosynthetic process%3B GO_process: GO:0006970 - response to osmotic stress;codon_start=1;transl_table=11;product=OPG biosynthetic periplasmic beta-1%2C6 branching glycosyltransferase;protein_id=AAC74132.1;db_xref=GI:1787286;db_xref=ASAP:ABE-0003558;db_xref=UniProtKB/Swiss-Prot:P33136;db_xref=EcoGene:EG11885 EMBL gene 1110863 1113406 . + . ID=.2279;gene=opgH;locus_tag=b1049;gene_synonym=ECK1035;gene_synonym=JW1037;gene_synonym=mdoA;gene_synonym=mdoH;db_xref=EcoGene:EG11886 EMBL CDS 1110863 1113406 . + 0 ID=.2280;gene=opgH;locus_tag=b1049;gene_synonym=ECK1035;gene_synonym=JW1037;gene_synonym=mdoA;gene_synonym=mdoH;function=enzyme%3B Osmoregulated periplasmic glucan (OPG) biosynthesis biosynthesis;note=membrane glycosyltransferase%3B synthesis of membrane-derived oligosaccharide (MDO)%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006970 - response to osmotic stress;codon_start=1;transl_table=11;product=OPG biosynthetic ACP-dependent transmembrane UDP-glucose beta-1%2C2 glycosyltransferase%3B nutrient-dependent cell size regulator%2C FtsZ assembly antagonist;protein_id=AAC74133.1;db_xref=GI:1787287;db_xref=ASAP:ABE-0003560;db_xref=UniProtKB/Swiss-Prot:P62517;db_xref=EcoGene:EG11886 EMBL repeat_region 1113417 1113514 . + . ID=.2281;note=RIP97 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 1113579 1113806 . + . ID=.2282;gene=yceK;locus_tag=b1050;gene_synonym=ECK1036;gene_synonym=JW5151;db_xref=EcoGene:EG12689 EMBL CDS 1113579 1113806 . + 0 ID=.2283;gene=yceK;locus_tag=b1050;gene_synonym=ECK1036;gene_synonym=JW5151;codon_start=1;transl_table=11;product=outer membrane integrity lipoprotein;protein_id=AAC74134.1;db_xref=GI:1787288;db_xref=ASAP:ABE-0003565;db_xref=UniProtKB/Swiss-Prot:P0AB31;db_xref=EcoGene:EG12689 EMBL gene 1113807 1114181 . - . ID=.2284;gene=msyB;locus_tag=b1051;gene_synonym=ECK1037;gene_synonym=JW1039;db_xref=EcoGene:EG11338 EMBL CDS 1113807 1114181 . - 0 ID=.2285;gene=msyB;locus_tag=b1051;gene_synonym=ECK1037;gene_synonym=JW1039;function=phenotype%3B Protein%2C peptide secretion;note=acidic protein suppresses mutants lacking function of protein export;codon_start=1;transl_table=11;product=multicopy suppressor of secY and secA;protein_id=AAC74135.2;db_xref=GI:87081827;db_xref=ASAP:ABE-0003567;db_xref=UniProtKB/Swiss-Prot:P25738;db_xref=EcoGene:EG11338 EMBL gene 1114264 1115490 . - . ID=.2286;gene=mdtG;locus_tag=b1053;gene_synonym=ECK1038;gene_synonym=JW1040;gene_synonym=yceE;db_xref=EcoGene:EG11343 EMBL CDS 1114264 1115490 . - 0 ID=.2287;gene=mdtG;locus_tag=b1053;gene_synonym=ECK1038;gene_synonym=JW1040;gene_synonym=yceE;function=putative transport%3B Not classified;note=putative transport protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative drug efflux system protein;protein_id=AAC74137.1;db_xref=GI:1787291;db_xref=ASAP:ABE-0003572;db_xref=UniProtKB/Swiss-Prot:P25744;db_xref=EcoGene:EG11343 EMBL repeat_region 1115626 1115652 . + . ID=.2288;note=REP98 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 1115662 1116582 . - . ID=.2289;gene=lpxL;locus_tag=b1054;gene_synonym=ECK1039;gene_synonym=htrB;gene_synonym=JW1041;gene_synonym=waaM;db_xref=EcoGene:EG10464 EMBL CDS 1115662 1116582 . - 0 ID=.2290;gene=lpxL;locus_tag=b1054;gene_synonym=ECK1039;gene_synonym=htrB;gene_synonym=JW1041;gene_synonym=waaM;ec_number=2.3.1.-;function=factor%3B Adaptations%2C atypical conditions;note=heat shock protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0009245 - lipid A biosynthetic process;codon_start=1;transl_table=11;product=lauryl-acyl carrier protein (ACP)-dependent acyltransferase;protein_id=AAC74138.1;db_xref=GI:1787292;db_xref=ASAP:ABE-0003574;db_xref=UniProtKB/Swiss-Prot:P0ACV0;db_xref=EcoGene:EG10464 EMBL gene 1116807 1117859 . + . ID=.2291;gene=yceA;locus_tag=b1055;gene_synonym=ECK1040;gene_synonym=JW1042;db_xref=EcoGene:EG11116 EMBL CDS 1116807 1117859 . + 0 ID=.2292;gene=yceA;locus_tag=b1055;gene_synonym=ECK1040;gene_synonym=JW1042;note=GO_process: GO:0007049 - cell cycle;codon_start=1;transl_table=11;product=putative rhodanese-related sulfurtransferase;protein_id=AAC74139.1;db_xref=GI:1787294;db_xref=ASAP:ABE-0003581;db_xref=UniProtKB/Swiss-Prot:P24188;db_xref=EcoGene:EG11116 EMBL repeat_region 1117868 1117888 . + . ID=.2293;note=REP99 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 1117901 1118476 . - . ID=.2294;gene=yceI;locus_tag=b1056;gene_synonym=ECK1041;gene_synonym=JW1043;db_xref=EcoGene:EG11820 EMBL CDS 1117901 1118476 . - 0 ID=.2295;gene=yceI;locus_tag=b1056;gene_synonym=ECK1041;gene_synonym=JW1043;codon_start=1;transl_table=11;product=periplasmic high pH-inducible lipid-binding protein;protein_id=AAC74140.1;db_xref=GI:1787295;db_xref=ASAP:ABE-0003583;db_xref=UniProtKB/Swiss-Prot:P0A8X2;db_xref=EcoGene:EG11820 EMBL gene 1118480 1119046 . - . ID=.2296;gene=yceJ;locus_tag=b1057;gene_synonym=ECK1042;gene_synonym=JW1044;db_xref=EcoGene:EG12659 EMBL CDS 1118480 1119046 . - 0 ID=.2297;gene=yceJ;locus_tag=b1057;gene_synonym=ECK1042;gene_synonym=JW1044;function=putative enzyme%3B Not classified;note=GO_process: GO:0017004 - cytochrome complex assembly;codon_start=1;transl_table=11;product=putative cytochrome b561;protein_id=AAC74141.1;db_xref=GI:1787296;db_xref=ASAP:ABE-0003585;db_xref=UniProtKB/Swiss-Prot:P75925;db_xref=EcoGene:EG12659 EMBL gene 1119307 1119447 . - . ID=.2298;gene=yceO;locus_tag=b1058;gene_synonym=ECK1043;gene_synonym=JW1045;db_xref=EcoGene:EG14334 EMBL CDS 1119307 1119447 . - 0 ID=.2299;gene=yceO;locus_tag=b1058;gene_synonym=ECK1043;gene_synonym=JW1045;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC74142.1;db_xref=GI:1787297;db_xref=ASAP:ABE-0003588;db_xref=UniProtKB/Swiss-Prot:P64442;db_xref=EcoGene:EG14334 EMBL gene 1119468 1120586 . - . ID=.2300;gene=solA;locus_tag=b1059;gene_synonym=ECK1044;gene_synonym=JW1046;db_xref=EcoGene:EG12669 EMBL CDS 1119468 1120586 . - 0 ID=.2301;gene=solA;locus_tag=b1059;gene_synonym=ECK1044;gene_synonym=JW1046;ec_number=1.5.3.2;function=putative enzyme%3B Not classified;note=sarcosine oxidase-like protein;codon_start=1;transl_table=11;product=N-methyltryptophan oxidase%2C FAD-binding;protein_id=AAC74143.1;db_xref=GI:1787298;db_xref=ASAP:ABE-0003590;db_xref=UniProtKB/Swiss-Prot:P40874;db_xref=EcoGene:EG12669 EMBL gene 1120701 1120955 . - . ID=.2302;gene=bssS;locus_tag=b1060;gene_synonym=ECK1045;gene_synonym=JW5152;gene_synonym=yceP;db_xref=EcoGene:EG14335 EMBL CDS 1120701 1120955 . - 0 ID=.2303;gene=bssS;locus_tag=b1060;gene_synonym=ECK1045;gene_synonym=JW5152;gene_synonym=yceP;codon_start=1;transl_table=11;product=biofilm regulator;protein_id=AAC74144.1;db_xref=GI:1787299;db_xref=ASAP:ABE-0003594;db_xref=UniProtKB/Swiss-Prot:P0AB33;db_xref=EcoGene:EG14335 EMBL gene 1121242 1121487 . - . ID=.2304;gene=dinI;locus_tag=b1061;gene_synonym=ECK1046;gene_synonym=JW1048;db_xref=EcoGene:EG12670 EMBL CDS 1121242 1121487 . - 0 ID=.2305;gene=dinI;locus_tag=b1061;gene_synonym=ECK1046;gene_synonym=JW1048;function=phenotype%3B Not classified;note=damage-inducible protein I%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006281 - DNA repair%3B GO_process: GO:0009432 - SOS response;codon_start=1;transl_table=11;product=DNA damage-inducible protein I;protein_id=AAC74145.1;db_xref=GI:1787300;db_xref=ASAP:ABE-0003599;db_xref=UniProtKB/Swiss-Prot:P0ABR1;db_xref=EcoGene:EG12670 EMBL gene 1121561 1122607 . - . ID=.2306;gene=pyrC;locus_tag=b1062;gene_synonym=ECK1047;gene_synonym=JW1049;db_xref=EcoGene:EG10806 EMBL CDS 1121561 1122607 . - 0 ID=.2307;gene=pyrC;locus_tag=b1062;gene_synonym=ECK1047;gene_synonym=JW1049;ec_number=3.5.2.3;function=enzyme%3B Pyrimidine ribonucleotide biosynthesis;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006221 - pyrimidine nucleotide biosynthetic process;codon_start=1;transl_table=11;product=dihydro-orotase;protein_id=AAC74146.1;db_xref=GI:1787301;db_xref=ASAP:ABE-0003607;db_xref=UniProtKB/Swiss-Prot:P05020;db_xref=EcoGene:EG10806 EMBL gene 1122713 1123273 . - . ID=.2308;gene=yceB;locus_tag=b1063;gene_synonym=ECK1048;gene_synonym=JW1050;db_xref=EcoGene:EG11117 EMBL CDS 1122713 1123273 . - 0 ID=.2309;gene=yceB;locus_tag=b1063;gene_synonym=ECK1048;gene_synonym=JW1050;codon_start=1;transl_table=11;product=lipoprotein%2C DUF1439 family;protein_id=AAC74147.1;db_xref=GI:1787302;db_xref=ASAP:ABE-0003611;db_xref=UniProtKB/Swiss-Prot:P0AB26;db_xref=EcoGene:EG11117 EMBL gene 1123407 1124054 . - . ID=.2310;gene=grxB;locus_tag=b1064;gene_synonym=ECK1049;gene_synonym=JW1051;db_xref=EcoGene:EG12688 EMBL CDS 1123407 1124054 . - 0 ID=.2311;gene=grxB;locus_tag=b1064;gene_synonym=ECK1049;gene_synonym=JW1051;function=carrier%3B Biosynthesis of cofactors%2C carriers: Thioredoxin%2C glutaredoxin%2C glutathione;experiment=N-terminus verified by Edman degradation: PMID 7937896;note=glutaredoxin 2;codon_start=1;transl_table=11;product=glutaredoxin 2 (Grx2);protein_id=AAC74148.1;db_xref=GI:1787303;db_xref=ASAP:ABE-0003615;db_xref=UniProtKB/Swiss-Prot:P0AC59;db_xref=EcoGene:EG12688 EMBL gene 1124118 1125326 . - . ID=.2312;gene=mdtH;locus_tag=b1065;gene_synonym=ECK1050;gene_synonym=JW1052;gene_synonym=yceL;db_xref=EcoGene:EG13878 EMBL CDS 1124118 1125326 . - 0 ID=.2313;gene=mdtH;locus_tag=b1065;gene_synonym=ECK1050;gene_synonym=JW1052;gene_synonym=yceL;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=multidrug resistance efflux transporter conferring overexpression resistance to norfloxacin and enoxacin;protein_id=AAC74149.2;db_xref=GI:87081828;db_xref=ASAP:ABE-0003618;db_xref=UniProtKB/Swiss-Prot:P69367;db_xref=EcoGene:EG13878 EMBL gene 1125562 1126146 . + . ID=.2314;gene=rimJ;locus_tag=b1066;gene_synonym=ECK1051;gene_synonym=JW1053;gene_synonym=tcp;db_xref=EcoGene:EG10851 EMBL CDS 1125562 1126146 . + 0 ID=.2315;gene=rimJ;locus_tag=b1066;gene_synonym=ECK1051;gene_synonym=JW1053;gene_synonym=tcp;ec_number=2.3.1.128;function=enzyme%3B Ribosomes - maturation and modification;note=acetylation of N-terminal alanine of 30S ribosomal subunit protein S5%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=ribosomal-protein-S5-alanine N-acetyltransferase;protein_id=AAC74150.1;db_xref=GI:1787305;db_xref=ASAP:ABE-0003622;db_xref=UniProtKB/Swiss-Prot:P0A948;db_xref=EcoGene:EG10851 EMBL gene 1126157 1126804 . + . ID=.2316;gene=yceH;locus_tag=b1067;gene_synonym=ECK1052;gene_synonym=JW1054;db_xref=EcoGene:EG11537 EMBL CDS 1126157 1126804 . + 0 ID=.2317;gene=yceH;locus_tag=b1067;gene_synonym=ECK1052;gene_synonym=JW1054;codon_start=1;transl_table=11;product=UPF0502 family protein;protein_id=AAC74151.1;db_xref=GI:1787306;db_xref=ASAP:ABE-0003625;db_xref=UniProtKB/Swiss-Prot:P29217;db_xref=EcoGene:EG11537 EMBL gene 1126806 1127729 . + . ID=.2318;gene=yceM;locus_tag=b1068;gene_synonym=ECK1053;gene_synonym=JW1055;gene_synonym=mviM;gene_synonym=mviS;db_xref=EcoGene:EG13879 EMBL CDS 1126806 1127729 . + 0 ID=.2319;gene=yceM;locus_tag=b1068;gene_synonym=ECK1053;gene_synonym=JW1055;gene_synonym=mviM;gene_synonym=mviS;function=putative factor%3B Not classified;note=putative virulence factor;codon_start=1;transl_table=11;product=putative oxidoreductase;protein_id=AAC74152.1;db_xref=GI:1787307;db_xref=ASAP:ABE-0003627;db_xref=UniProtKB/Swiss-Prot:P75931;db_xref=EcoGene:EG13879 EMBL gene 1127839 1129374 . + . ID=.2320;gene=murJ;locus_tag=b1069;gene_synonym=ECK1054;gene_synonym=JW1056;gene_synonym=mviN;gene_synonym=mviS;gene_synonym=yceN;db_xref=EcoGene:EG13880 EMBL CDS 1127839 1129374 . + 0 ID=.2321;gene=murJ;locus_tag=b1069;gene_synonym=ECK1054;gene_synonym=JW1056;gene_synonym=mviN;gene_synonym=mviS;gene_synonym=yceN;function=putative factor%3B Not classified;note=putative virulence factor;codon_start=1;transl_table=11;product=putative lipid II flippase;protein_id=AAC74153.1;db_xref=GI:1787309;db_xref=ASAP:ABE-0003630;db_xref=UniProtKB/Swiss-Prot:P0AF16;db_xref=EcoGene:EG13880 EMBL gene 1129414 1129830 . - . ID=.2322;gene=flgN;locus_tag=b1070;gene_synonym=ECK1055;gene_synonym=JW1057;db_xref=EcoGene:EG12665 EMBL CDS 1129414 1129830 . - 0 ID=.2323;gene=flgN;locus_tag=b1070;gene_synonym=ECK1055;gene_synonym=JW1057;function=phenotype%3B Surface structures;note=protein of flagellar biosynthesis%3B GO_component: GO:0019861 - flagellum%3B GO_process: GO:0009296 - flagellum assembly%3B GO_process: GO:0006457 - protein folding%3B GO_process: GO:0042330 - taxis;codon_start=1;transl_table=11;product=export chaperone for FlgK and FlgL;protein_id=AAC74154.1;db_xref=GI:1787310;db_xref=ASAP:ABE-0003632;db_xref=UniProtKB/Swiss-Prot:P43533;db_xref=EcoGene:EG12665 EMBL gene 1129835 1130128 . - . ID=.2324;gene=flgM;locus_tag=b1071;gene_synonym=ECK1056;gene_synonym=JW1058;gene_synonym=mviS;db_xref=EcoGene:EG12664 EMBL CDS 1129835 1130128 . - 0 ID=.2325;gene=flgM;locus_tag=b1071;gene_synonym=ECK1056;gene_synonym=JW1058;gene_synonym=mviS;function=factor%3B Surface structures;note=anti-FliA (anti-sigma) factor%3B also known as RflB protein%3B GO_component: GO:0019861 - flagellum%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006350 - transcription%3B GO_process: GO:0042330 - taxis;codon_start=1;transl_table=11;product=anti-sigma factor for FliA (sigma 28);protein_id=AAC74155.1;db_xref=GI:1787311;db_xref=ASAP:ABE-0003634;db_xref=UniProtKB/Swiss-Prot:P0AEM4;db_xref=EcoGene:EG12664 EMBL gene 1130204 1130863 . - . ID=.2326;gene=flgA;locus_tag=b1072;gene_synonym=ECK1057;gene_synonym=flaU;gene_synonym=JW1059;db_xref=EcoGene:EG20263 EMBL CDS 1130204 1130863 . - 0 ID=.2327;gene=flgA;locus_tag=b1072;gene_synonym=ECK1057;gene_synonym=flaU;gene_synonym=JW1059;function=putative structure%3B Surface structures;note=flagellar biosynthesis%3B assembly of basal-body periplasmic P ring%3B GO_component: GO:0019861 - flagellum%3B GO_process: GO:0009296 - flagellum assembly%3B GO_process: GO:0042330 - taxis;codon_start=1;transl_table=11;product=assembly protein for flagellar basal-body periplasmic P ring;protein_id=AAC74156.1;db_xref=GI:1787312;db_xref=ASAP:ABE-0003637;db_xref=UniProtKB/Swiss-Prot:P75933;db_xref=EcoGene:EG20263 EMBL gene 1131018 1131434 . + . ID=.2328;gene=flgB;locus_tag=b1073;gene_synonym=ECK1058;gene_synonym=flbA;gene_synonym=JW1060;db_xref=EcoGene:EG14266 EMBL CDS 1131018 1131434 . + 0 ID=.2329;gene=flgB;locus_tag=b1073;gene_synonym=ECK1058;gene_synonym=flbA;gene_synonym=JW1060;function=structural component%3B Surface structures;note=flagellar biosynthesis%2C cell-proximal portion of basal-body rod%3B GO_component: GO:0019861 - flagellum%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0009296 - flagellum assembly%3B GO_process: GO:0042330 - taxis;codon_start=1;transl_table=11;product=flagellar component of cell-proximal portion of basal-body rod;protein_id=AAC74157.1;db_xref=GI:1787313;db_xref=ASAP:ABE-0003641;db_xref=UniProtKB/Swiss-Prot:P0ABW9;db_xref=EcoGene:EG14266 EMBL gene 1131438 1131842 . + . ID=.2330;gene=flgC;locus_tag=b1074;gene_synonym=ECK1059;gene_synonym=flaW;gene_synonym=JW1061;db_xref=EcoGene:EG14267 EMBL CDS 1131438 1131842 . + 0 ID=.2331;gene=flgC;locus_tag=b1074;gene_synonym=ECK1059;gene_synonym=flaW;gene_synonym=JW1061;function=structural component%3B Surface structures;note=flagellar biosynthesis%2C cell-proximal portion of basal-body rod%3B GO_component: GO:0019861 - flagellum%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0009296 - flagellum assembly%3B GO_process: GO:0042330 - taxis;codon_start=1;transl_table=11;product=flagellar component of cell-proximal portion of basal-body rod;protein_id=AAC74158.1;db_xref=GI:1787314;db_xref=ASAP:ABE-0003643;db_xref=UniProtKB/Swiss-Prot:P0ABX2;db_xref=EcoGene:EG14267 EMBL gene 1131854 1132549 . + . ID=.2332;gene=flgD;locus_tag=b1075;gene_synonym=ECK1060;gene_synonym=flaV;gene_synonym=JW1062;db_xref=EcoGene:EG14268 EMBL CDS 1131854 1132549 . + 0 ID=.2333;gene=flgD;locus_tag=b1075;gene_synonym=ECK1060;gene_synonym=flaV;gene_synonym=JW1062;function=putative structure%3B Surface structures;note=flagellar biosynthesis%2C initiation of hook assembly%3B GO_component: GO:0019861 - flagellum%3B GO_process: GO:0009296 - flagellum assembly%3B GO_process: GO:0042330 - taxis;codon_start=1;transl_table=11;product=flagellar hook assembly protein;protein_id=AAC74159.1;db_xref=GI:1787315;db_xref=ASAP:ABE-0003645;db_xref=UniProtKB/Swiss-Prot:P75936;db_xref=EcoGene:EG14268 EMBL gene 1132574 1133782 . + . ID=.2334;gene=flgE;locus_tag=b1076;gene_synonym=ECK1061;gene_synonym=flaK;gene_synonym=JW1063;db_xref=EcoGene:EG14269 EMBL CDS 1132574 1133782 . + 0 ID=.2335;gene=flgE;locus_tag=b1076;gene_synonym=ECK1061;gene_synonym=flaK;gene_synonym=JW1063;function=structural component%3B Surface structures;note=flagellar biosynthesis%2C hook protein%3B GO_component: GO:0019861 - flagellum%3B GO_process: GO:0009296 - flagellum assembly%3B GO_process: GO:0042330 - taxis;codon_start=1;transl_table=11;product=flagellar hook protein;protein_id=AAC74160.1;db_xref=GI:1787316;db_xref=ASAP:ABE-0003647;db_xref=UniProtKB/Swiss-Prot:P75937;db_xref=EcoGene:EG14269 EMBL gene 1133802 1134557 . + . ID=.2336;gene=flgF;locus_tag=b1077;gene_synonym=ECK1062;gene_synonym=flaX;gene_synonym=JW1064;db_xref=EcoGene:EG14270 EMBL CDS 1133802 1134557 . + 0 ID=.2337;gene=flgF;locus_tag=b1077;gene_synonym=ECK1062;gene_synonym=flaX;gene_synonym=JW1064;function=structural component%3B Surface structures;note=flagellar biosynthesis%2C cell-proximal portion of basal-body rod%3B GO_component: GO:0019861 - flagellum%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0009296 - flagellum assembly%3B GO_process: GO:0042330 - taxis;codon_start=1;transl_table=11;product=flagellar component of cell-proximal portion of basal-body rod;protein_id=AAC74161.1;db_xref=GI:1787317;db_xref=ASAP:ABE-0003649;db_xref=UniProtKB/Swiss-Prot:P75938;db_xref=EcoGene:EG14270 EMBL repeat_region 1134586 1134683 . + . ID=.2338;note=RIP100 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 1134729 1135511 . + . ID=.2339;gene=flgG;locus_tag=b1078;gene_synonym=ECK1063;gene_synonym=flaL;gene_synonym=JW1065;db_xref=EcoGene:EG14271 EMBL CDS 1134729 1135511 . + 0 ID=.2340;gene=flgG;locus_tag=b1078;gene_synonym=ECK1063;gene_synonym=flaL;gene_synonym=JW1065;function=structural component%3B Surface structures;note=flagellar biosynthesis%2C cell-distal portion of basal-body rod%3B GO_component: GO:0019861 - flagellum%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0009296 - flagellum assembly%3B GO_process: GO:0042330 - taxis;codon_start=1;transl_table=11;product=flagellar component of cell-distal portion of basal-body rod;protein_id=AAC74162.1;db_xref=GI:1787318;db_xref=ASAP:ABE-0003652;db_xref=UniProtKB/Swiss-Prot:P0ABX5;db_xref=EcoGene:EG14271 EMBL gene 1135564 1136262 . + . ID=.2341;gene=flgH;locus_tag=b1079;gene_synonym=ECK1064;gene_synonym=flaY;gene_synonym=JW5153;db_xref=EcoGene:EG20264 EMBL CDS 1135564 1136262 . + 0 ID=.2342;gene=flgH;locus_tag=b1079;gene_synonym=ECK1064;gene_synonym=flaY;gene_synonym=JW5153;function=structural component%3B Surface structures;note=flagellar biosynthesis%2C basal-body outer-membrane L (lipopolysaccharide layer) ring protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019861 - flagellum%3B GO_component: GO:0009279 - cell outer membrane%3B GO_process: GO:0009296 - flagellum assembly%3B GO_process: GO:0042330 - taxis;codon_start=1;transl_table=11;product=flagellar protein of basal-body outer-membrane L ring;protein_id=AAC74163.1;db_xref=GI:1787319;db_xref=ASAP:ABE-0003654;db_xref=UniProtKB/Swiss-Prot:P0A6S0;db_xref=EcoGene:EG20264 EMBL gene 1136274 1137371 . + . ID=.2343;gene=flgI;locus_tag=b1080;gene_synonym=ECK1065;gene_synonym=flaM;gene_synonym=JW1067;db_xref=EcoGene:EG20265 EMBL CDS 1136274 1137371 . + 0 ID=.2344;gene=flgI;locus_tag=b1080;gene_synonym=ECK1065;gene_synonym=flaM;gene_synonym=JW1067;function=putative structural component%3B Surface structures;note=homolog of Salmonella P-ring of flagella basal body%3B GO_component: GO:0019861 - flagellum%3B GO_process: GO:0009296 - flagellum assembly%3B GO_process: GO:0042330 - taxis;codon_start=1;transl_table=11;product=putative flagellar basal body protein;protein_id=AAC74164.1;db_xref=GI:1787320;db_xref=ASAP:ABE-0003656;db_xref=UniProtKB/Swiss-Prot:P0A6S3;db_xref=EcoGene:EG20265 EMBL gene 1137371 1138312 . + . ID=.2345;gene=flgJ;locus_tag=b1081;gene_synonym=ECK1066;gene_synonym=flaZ;gene_synonym=JW1068;db_xref=EcoGene:EG14272 EMBL CDS 1137371 1138312 . + 0 ID=.2346;gene=flgJ;locus_tag=b1081;gene_synonym=ECK1066;gene_synonym=flaZ;gene_synonym=JW1068;function=structure%3B Surface structures%3B enzyme%3B Murein sacculus%2C peptidoglycan;note=flagellar biosynthesis%3B GO_component: GO:0019861 - flagellum%3B GO_process: GO:0009296 - flagellum assembly%3B GO_process: GO:0042330 - taxis;codon_start=1;transl_table=11;product=flagellar rod assembly protein and murein hydrolase%3B flagellum-specific muramidase;protein_id=AAC74165.1;db_xref=GI:1787321;db_xref=ASAP:ABE-0003658;db_xref=UniProtKB/Swiss-Prot:P75942;db_xref=EcoGene:EG14272 EMBL gene 1138378 1140021 . + . ID=.2347;gene=flgK;locus_tag=b1082;gene_synonym=ECK1067;gene_synonym=flaS;gene_synonym=JW1069;db_xref=EcoGene:EG11967 EMBL CDS 1138378 1140021 . + 0 ID=.2348;gene=flgK;locus_tag=b1082;gene_synonym=ECK1067;gene_synonym=flaS;gene_synonym=JW1069;function=structural component%3B Surface structures;note=flagellar biosynthesis%2C hook-filament junction protein 1%3B GO_component: GO:0019861 - flagellum%3B GO_process: GO:0009296 - flagellum assembly%3B GO_process: GO:0006457 - protein folding%3B GO_process: GO:0042330 - taxis;codon_start=1;transl_table=11;product=flagellar hook-filament junction protein 1;protein_id=AAC74166.1;db_xref=GI:1787323;db_xref=ASAP:ABE-0003660;db_xref=UniProtKB/Swiss-Prot:P33235;db_xref=EcoGene:EG11967 EMBL gene 1140033 1140986 . + . ID=.2349;gene=flgL;locus_tag=b1083;gene_synonym=ECK1068;gene_synonym=flaT;gene_synonym=JW1070;db_xref=EcoGene:EG11545 EMBL CDS 1140033 1140986 . + 0 ID=.2350;gene=flgL;locus_tag=b1083;gene_synonym=ECK1068;gene_synonym=flaT;gene_synonym=JW1070;function=structural component%3B Surface structures;note=flagellar biosynthesis%3B hook-filament junction protein%3B GO_component: GO:0019861 - flagellum%3B GO_process: GO:0009296 - flagellum assembly%3B GO_process: GO:0006457 - protein folding%3B GO_process: GO:0042330 - taxis;codon_start=1;transl_table=11;product=flagellar hook-filament junction protein;protein_id=AAC74167.1;db_xref=GI:1787324;db_xref=ASAP:ABE-0003666;db_xref=UniProtKB/Swiss-Prot:P29744;db_xref=EcoGene:EG11545 EMBL gene 1141182 1144367 . - . ID=.2351;gene=rne;locus_tag=b1084;gene_synonym=ams;gene_synonym=ECK1069;gene_synonym=hmp1;gene_synonym=JW1071;gene_synonym=smbB;db_xref=EcoGene:EG10859 EMBL CDS 1141182 1144367 . - 0 ID=.2352;gene=rne;locus_tag=b1084;gene_synonym=ams;gene_synonym=ECK1069;gene_synonym=hmp1;gene_synonym=JW1071;gene_synonym=smbB;ec_number=3.1.4.-;function=enzyme%3B Degradation of RNA;experiment=N-terminus verified by Edman degradation: PMID 2011493;note=RNase E%2C membrane attachment%2C mRNA turnover%2C maturation 5S RNA%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006401 - RNA catabolic process;codon_start=1;transl_table=11;product=endoribonuclease%3B RNA-binding protein%3BRNA degradosome binding protein;protein_id=AAC74168.1;db_xref=GI:1787325;db_xref=ASAP:ABE-0003668;db_xref=UniProtKB/Swiss-Prot:P21513;db_xref=EcoGene:EG10859 EMBL gene 1144502 1144822 . + . ID=.2353;gene=yceQ;locus_tag=b1085;gene_synonym=ECK1070;gene_synonym=JW5154;db_xref=EcoGene:EG14413 EMBL CDS 1144502 1144822 . + 0 ID=.2354;gene=yceQ;locus_tag=b1085;gene_synonym=ECK1070;gene_synonym=JW5154;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC74169.2;db_xref=GI:87081829;db_xref=ASAP:ABE-0003672;db_xref=UniProtKB/Swiss-Prot:P62066;db_xref=EcoGene:EG14413 EMBL gene 1144940 1145899 . + . ID=.2355;gene=rluC;locus_tag=b1086;gene_synonym=ECK1071;gene_synonym=JW1072;gene_synonym=yceC;db_xref=EcoGene:EG11118 EMBL CDS 1144940 1145899 . + 0 ID=.2356;gene=rluC;locus_tag=b1086;gene_synonym=ECK1071;gene_synonym=JW1072;gene_synonym=yceC;ec_number=4.2.1.70;function=enzyme%3B rRNA modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009451 - RNA modification;codon_start=1;transl_table=11;product=23S rRNA pseudouridine(955%2C2504%2C2580) synthase;protein_id=AAC74170.1;db_xref=GI:1787327;db_xref=ASAP:ABE-0003675;db_xref=UniProtKB/Swiss-Prot:P0AA39;db_xref=EcoGene:EG11118 EMBL repeat_region 1145928 1146002 . + . ID=.2357;note=REP101 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 1146011 1146595 . - . ID=.2358;gene=yceF;locus_tag=b1087;gene_synonym=ECK1072;gene_synonym=JW5155;db_xref=EcoGene:EG11438 EMBL CDS 1146011 1146595 . - 0 ID=.2359;gene=yceF;locus_tag=b1087;gene_synonym=ECK1072;gene_synonym=JW5155;codon_start=1;transl_table=11;product=m(7)GTP pyrophosphatase;protein_id=AAC74171.2;db_xref=GI:87081830;db_xref=ASAP:ABE-0003678;db_xref=UniProtKB/Swiss-Prot:P0A729;db_xref=EcoGene:EG11438 EMBL gene 1146589 1146757 . + . ID=.2360;gene=psrD;locus_tag=b4418;gene_synonym=ECK1073;gene_synonym=JWR0228;gene_synonym=pke20;gene_synonym=psrA4;gene_synonym=sraB;db_xref=EcoGene:EG31138 EMBL ncRNA 1146589 1146757 . + . ID=.2361;ncrna_class=other;gene=psrD;locus_tag=b4418;gene_synonym=ECK1073;gene_synonym=JWR0228;gene_synonym=pke20;gene_synonym=psrA4;gene_synonym=sraB;product=novel Novel sRNA%2C function unknown;note=identified in a large scale screen;db_xref=ASAP:ABE-0047242;db_xref=EcoGene:EG31138 EMBL gene 1146794 1147315 . + . ID=.2362;gene=yceD;locus_tag=b1088;gene_synonym=ECK1074;gene_synonym=JW1074;db_xref=EcoGene:EG11119 EMBL CDS 1146794 1147315 . + 0 ID=.2363;gene=yceD;locus_tag=b1088;gene_synonym=ECK1074;gene_synonym=JW1074;codon_start=1;transl_table=11;product=DUF177 family protein;protein_id=AAC74172.1;db_xref=GI:1787329;db_xref=ASAP:ABE-0003684;db_xref=UniProtKB/Swiss-Prot:P0AB28;db_xref=EcoGene:EG11119 EMBL gene 1147367 1147540 . + . ID=.2364;gene=rpmF;locus_tag=b1089;gene_synonym=ECK1075;gene_synonym=JW1075;db_xref=EcoGene:EG10890 EMBL CDS 1147367 1147540 . + 0 ID=.2365;gene=rpmF;locus_tag=b1089;gene_synonym=ECK1075;gene_synonym=JW1075;function=structural component%3B Ribosomal proteins - synthesis%2C modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0003735 - structural constituent of ribosome%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=50S ribosomal subunit protein L32;protein_id=AAC74173.1;db_xref=GI:1787330;db_xref=ASAP:ABE-0003686;db_xref=UniProtKB/Swiss-Prot:P0A7N4;db_xref=EcoGene:EG10890 EMBL gene 1147621 1148691 . + . ID=.2366;gene=plsX;locus_tag=b1090;gene_synonym=ECK1076;gene_synonym=JW5156;db_xref=EcoGene:EG11437 EMBL CDS 1147621 1148691 . + 0 ID=.2367;gene=plsX;locus_tag=b1090;gene_synonym=ECK1076;gene_synonym=JW5156;function=phenotype%3B Macromolecule synthesis%2C modification: Phospholipids;note=glycerolphosphate auxotrophy in plsB background%3B GO_process: GO:0008654 - phospholipid biosynthetic process;codon_start=1;transl_table=11;product=putative phosphate acyltransferase;protein_id=AAC74174.2;db_xref=GI:87081831;db_xref=ASAP:ABE-0003692;db_xref=UniProtKB/Swiss-Prot:P27247;db_xref=EcoGene:EG11437 EMBL gene 1148759 1149712 . + . ID=.2368;gene=fabH;locus_tag=b1091;gene_synonym=ECK1077;gene_synonym=JW1077;db_xref=EcoGene:EG10277 EMBL CDS 1148759 1149712 . + 0 ID=.2369;gene=fabH;locus_tag=b1091;gene_synonym=ECK1077;gene_synonym=JW1077;ec_number=2.3.1.41;function=enzyme%3B Fatty acid and phosphatidic acid biosynthesis;experiment=N-terminus verified by Edman degradation: PMID 1551888;note=3-oxoacyl-[acyl-carrier-protein] synthase III%3B acetylCoA ACP transacylase%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=3-oxoacyl-[acyl-carrier-protein] synthase III;protein_id=AAC74175.1;db_xref=GI:1787333;db_xref=ASAP:ABE-0003696;db_xref=UniProtKB/Swiss-Prot:P0A6R0;db_xref=EcoGene:EG10277 EMBL gene 1149728 1150657 . + . ID=.2370;gene=fabD;locus_tag=b1092;gene_synonym=ECK1078;gene_synonym=JW1078;gene_synonym=tfpA;db_xref=EcoGene:EG11317 EMBL CDS 1149728 1150657 . + 0 ID=.2371;gene=fabD;locus_tag=b1092;gene_synonym=ECK1078;gene_synonym=JW1078;gene_synonym=tfpA;ec_number=2.3.1.39;function=enzyme%3B Fatty acid and phosphatidic acid biosynthesis;note=GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=malonyl-CoA-[acyl-carrier-protein] transacylase;protein_id=AAC74176.1;db_xref=GI:1787334;db_xref=ASAP:ABE-0003698;db_xref=UniProtKB/Swiss-Prot:P0AAI9;db_xref=EcoGene:EG11317 EMBL gene 1150670 1151404 . + . ID=.2372;gene=fabG;locus_tag=b1093;gene_synonym=ECK1079;gene_synonym=JW1079;db_xref=EcoGene:EG11318 EMBL CDS 1150670 1151404 . + 0 ID=.2373;gene=fabG;locus_tag=b1093;gene_synonym=ECK1079;gene_synonym=JW1079;ec_number=1.1.1.100;function=enzyme%3B Fatty acid and phosphatidic acid biosynthesis;note=GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=3-oxoacyl-[acyl-carrier-protein] reductase;protein_id=AAC74177.1;db_xref=GI:1787335;db_xref=ASAP:ABE-0003700;db_xref=UniProtKB/Swiss-Prot:P0AEK2;db_xref=EcoGene:EG11318 EMBL gene 1151615 1151851 . + . ID=.2374;gene=acpP;locus_tag=b1094;gene_synonym=ECK1080;gene_synonym=JW1080;db_xref=EcoGene:EG50003 EMBL CDS 1151615 1151851 . + 0 ID=.2375;gene=acpP;locus_tag=b1094;gene_synonym=ECK1080;gene_synonym=JW1080;function=carrier%3B Fatty acid and phosphatidic acid biosynthesis;note=acyl carrier protein%3B GO_process: GO:0042967 - acyl-carrier-protein biosynthetic process;codon_start=1;transl_table=11;product=acyl carrier protein (ACP);protein_id=AAC74178.1;db_xref=GI:1787336;db_xref=ASAP:ABE-0003703;db_xref=UniProtKB/Swiss-Prot:P0A6A8;db_xref=EcoGene:EG50003 EMBL gene 1151939 1153180 . + . ID=.2376;gene=fabF;locus_tag=b1095;gene_synonym=cvc;gene_synonym=ECK1081;gene_synonym=fabJ;gene_synonym=JW1081;gene_synonym=vtr;db_xref=EcoGene:EG12606 EMBL CDS 1151939 1153180 . + 0 ID=.2377;gene=fabF;locus_tag=b1095;gene_synonym=cvc;gene_synonym=ECK1081;gene_synonym=fabJ;gene_synonym=JW1081;gene_synonym=vtr;ec_number=2.3.1.41;function=enzyme%3B Fatty acid and phosphatidic acid biosynthesis;note=GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=3-oxoacyl-[acyl-carrier-protein] synthase II;protein_id=AAC74179.1;db_xref=GI:1787337;db_xref=ASAP:ABE-0003705;db_xref=UniProtKB/Swiss-Prot:P0AAI5;db_xref=EcoGene:EG12606 EMBL gene 1153300 1154109 . + . ID=.2378;gene=pabC;locus_tag=b1096;gene_synonym=ECK1082;gene_synonym=JW1082;db_xref=EcoGene:EG11493 EMBL CDS 1153300 1154109 . + 0 ID=.2379;gene=pabC;locus_tag=b1096;gene_synonym=ECK1082;gene_synonym=JW1082;ec_number=4.1.3.38;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Folic acid;experiment=N-terminus verified by Edman degradation: PMID 1644759%2C2071583;note=4-amino-4-deoxychorismate lyase%3B GO_process: GO:0046656 - folic acid biosynthetic process;codon_start=1;transl_table=11;product=4-amino-4-deoxychorismate lyase component of para-aminobenzoate synthase multienzyme complex;protein_id=AAC74180.1;db_xref=GI:1787338;db_xref=ASAP:ABE-0003709;db_xref=UniProtKB/Swiss-Prot:P28305;db_xref=EcoGene:EG11493 EMBL gene 1154112 1155134 . + . ID=.2380;gene=yceG;locus_tag=b1097;gene_synonym=ECK1083;gene_synonym=JW1083;db_xref=EcoGene:EG11494 EMBL CDS 1154112 1155134 . + 0 ID=.2381;gene=yceG;locus_tag=b1097;gene_synonym=ECK1083;gene_synonym=JW1083;function=putative enzyme%3B Not classified;note=putative thymidylate kinase;codon_start=1;transl_table=11;product=septation protein%2C ampicillin sensitivity;protein_id=AAC74181.1;db_xref=GI:1787339;db_xref=ASAP:ABE-0003712;db_xref=UniProtKB/Swiss-Prot:P28306;db_xref=EcoGene:EG11494 EMBL gene 1155124 1155765 . + . ID=.2382;gene=tmk;locus_tag=b1098;gene_synonym=ECK1084;gene_synonym=JW1084;gene_synonym=ycfG;db_xref=EcoGene:EG12302 EMBL CDS 1155124 1155765 . + 0 ID=.2383;gene=tmk;locus_tag=b1098;gene_synonym=ECK1084;gene_synonym=JW1084;gene_synonym=ycfG;ec_number=2.7.4.9;function=enzyme%3B 2'-Deoxyribonucleotide metabolism;note=GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion;codon_start=1;transl_table=11;product=thymidylate kinase;protein_id=AAC74182.1;db_xref=GI:1787340;db_xref=ASAP:ABE-0003714;db_xref=UniProtKB/Swiss-Prot:P0A720;db_xref=EcoGene:EG12302 EMBL gene 1155762 1156766 . + . ID=.2384;gene=holB;locus_tag=b1099;gene_synonym=ECK1085;gene_synonym=JW1085;db_xref=EcoGene:EG11500 EMBL CDS 1155762 1156766 . + 0 ID=.2385;gene=holB;locus_tag=b1099;gene_synonym=ECK1085;gene_synonym=JW1085;ec_number=2.7.7.7;function=enzyme%3B DNA - replication%2C repair%2C restriction/modification;experiment=N-terminus verified by Edman degradation: PMID 8505303;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006261 - DNA-dependent DNA replication;codon_start=1;transl_table=11;product=DNA polymerase III%2C delta prime subunit;protein_id=AAC74183.1;db_xref=GI:1787341;db_xref=ASAP:ABE-0003716;db_xref=UniProtKB/Swiss-Prot:P28631;db_xref=EcoGene:EG11500 EMBL gene 1156777 1157574 . + . ID=.2386;gene=ycfH;locus_tag=b1100;gene_synonym=ECK1086;gene_synonym=JW1086;db_xref=EcoGene:EG12303 EMBL CDS 1156777 1157574 . + 0 ID=.2387;gene=ycfH;locus_tag=b1100;gene_synonym=ECK1086;gene_synonym=JW1086;codon_start=1;transl_table=11;product=putative DNase;protein_id=AAC74184.1;db_xref=GI:1787342;db_xref=ASAP:ABE-0003719;db_xref=UniProtKB/Swiss-Prot:P0AFQ7;db_xref=EcoGene:EG12303 EMBL gene 1157869 1159302 . + . ID=.2388;gene=ptsG;locus_tag=b1101;gene_synonym=car;gene_synonym=cat;gene_synonym=CR;gene_synonym=ECK1087;gene_synonym=glcA;gene_synonym=JW1087;gene_synonym=tgl;gene_synonym=umg;gene_synonym=umgC;db_xref=EcoGene:EG10787 EMBL CDS 1157869 1159302 . + 0 ID=.2389;gene=ptsG;locus_tag=b1101;gene_synonym=car;gene_synonym=cat;gene_synonym=CR;gene_synonym=ECK1087;gene_synonym=glcA;gene_synonym=JW1087;gene_synonym=tgl;gene_synonym=umg;gene_synonym=umgC;ec_number=2.7.1.69;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;experiment=N-terminus verified by Edman degradation: PMID 3023349;note=PTS system%2C glucose-specific IIBC component%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=fused glucose-specific PTS enzymes: IIB component/IIC component;protein_id=AAC74185.1;db_xref=GI:1787343;db_xref=ASAP:ABE-0003722;db_xref=UniProtKB/Swiss-Prot:P69786;db_xref=EcoGene:EG10787 EMBL gene 1159362 1161551 . - . ID=.2390;gene=fhuE;locus_tag=b1102;gene_synonym=ECK1088;gene_synonym=JW1088;db_xref=EcoGene:EG10306 EMBL CDS 1159362 1161551 . - 0 ID=.2391;gene=fhuE;locus_tag=b1102;gene_synonym=ECK1088;gene_synonym=JW1088;function=transport%3B Transport of small molecules: Cations;note=outer membrane receptor for ferric iron uptake%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane%3B GO_process: GO:0006826 - iron ion transport;codon_start=1;transl_table=11;product=ferric-rhodotorulic acid outer membrane transporter;protein_id=AAC74186.1;db_xref=GI:1787344;db_xref=ASAP:ABE-0003724;db_xref=UniProtKB/Swiss-Prot:P16869;db_xref=EcoGene:EG10306 EMBL gene 1161885 1162244 . + . ID=.2392;gene=hinT;locus_tag=b1103;gene_synonym=ECK1089;gene_synonym=JW1089;gene_synonym=ycfF;db_xref=EcoGene:EG12172 EMBL CDS 1161885 1162244 . + 0 ID=.2393;gene=hinT;locus_tag=b1103;gene_synonym=ECK1089;gene_synonym=JW1089;gene_synonym=ycfF;note=GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=purine nucleoside phosphoramidase%2C dadA activator protein;protein_id=AAC74187.1;db_xref=GI:1787346;db_xref=ASAP:ABE-0003729;db_xref=UniProtKB/Swiss-Prot:P0ACE7;db_xref=EcoGene:EG12172 EMBL gene 1162247 1162624 . + . ID=.2394;gene=ycfL;locus_tag=b1104;gene_synonym=ECK1090;gene_synonym=JW1090;db_xref=EcoGene:EG13430 EMBL CDS 1162247 1162624 . + 0 ID=.2395;gene=ycfL;locus_tag=b1104;gene_synonym=ECK1090;gene_synonym=JW1090;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC74188.1;db_xref=GI:1787347;db_xref=ASAP:ABE-0003731;db_xref=UniProtKB/Swiss-Prot:P75946;db_xref=EcoGene:EG13430 EMBL gene 1162638 1163279 . + . ID=.2396;gene=lpoB;locus_tag=b1105;gene_synonym=ECK1091;gene_synonym=JW5157;gene_synonym=ycfM;db_xref=EcoGene:EG13431 EMBL CDS 1162638 1163279 . + 0 ID=.2397;gene=lpoB;locus_tag=b1105;gene_synonym=ECK1091;gene_synonym=JW5157;gene_synonym=ycfM;codon_start=1;transl_table=11;product=OM lipoprotein stimulator of MrcB transpeptidase;protein_id=AAC74189.1;db_xref=GI:1787348;db_xref=ASAP:ABE-0003733;db_xref=UniProtKB/Swiss-Prot:P0AB38;db_xref=EcoGene:EG13431 EMBL gene 1163260 1164084 . + . ID=.2398;gene=thiK;locus_tag=b1106;gene_synonym=ECK1092;gene_synonym=JW1092;gene_synonym=ycfN;db_xref=EcoGene:EG13432 EMBL CDS 1163260 1164084 . + 0 ID=.2399;gene=thiK;locus_tag=b1106;gene_synonym=ECK1092;gene_synonym=JW1092;gene_synonym=ycfN;ec_number=2.7.1.89;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Thiamine;note=putative beta-glucosidase;codon_start=1;transl_table=11;product=thiamine kinase;protein_id=AAC74190.1;db_xref=GI:1787349;db_xref=ASAP:ABE-0003735;db_xref=UniProtKB/Swiss-Prot:P75948;db_xref=EcoGene:EG13432 EMBL gene 1164095 1165120 . + . ID=.2400;gene=nagZ;locus_tag=b1107;gene_synonym=ECK1093;gene_synonym=JW1093;gene_synonym=ycfO;db_xref=EcoGene:EG13433 EMBL CDS 1164095 1165120 . + 0 ID=.2401;gene=nagZ;locus_tag=b1107;gene_synonym=ECK1093;gene_synonym=JW1093;gene_synonym=ycfO;ec_number=3.2.1.52;note=GO_process: GO:0000270 - peptidoglycan metabolic process;codon_start=1;transl_table=11;product=beta N-acetyl-glucosaminidase;protein_id=AAC74191.1;db_xref=GI:1787350;db_xref=ASAP:ABE-0003737;db_xref=UniProtKB/Swiss-Prot:P75949;db_xref=EcoGene:EG13433 EMBL gene 1165143 1165685 . + . ID=.2402;gene=ycfP;locus_tag=b1108;gene_synonym=ECK1094;gene_synonym=JW5158;db_xref=EcoGene:EG13434 EMBL CDS 1165143 1165685 . + 0 ID=.2403;gene=ycfP;locus_tag=b1108;gene_synonym=ECK1094;gene_synonym=JW5158;codon_start=1;transl_table=11;product=putative UPF0227 family esterase;protein_id=AAC74192.2;db_xref=GI:87081832;db_xref=ASAP:ABE-0003740;db_xref=UniProtKB/Swiss-Prot:P0A8E1;db_xref=EcoGene:EG13434 EMBL repeat_region 1165739 1165813 . + . ID=.2404;note=REP102 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 1166085 1167389 . + . ID=.2405;gene=ndh;locus_tag=b1109;gene_synonym=ECK1095;gene_synonym=JW1095;db_xref=EcoGene:EG10649 EMBL CDS 1166085 1167389 . + 0 ID=.2406;gene=ndh;locus_tag=b1109;gene_synonym=ECK1095;gene_synonym=JW1095;ec_number=1.16.1.-;ec_number=1.6.99.3;function=enzyme%3B Energy metabolism%2C carbon: Aerobic respiration;note=respiratory NADH dehydrogenase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009060 - aerobic respiration%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=respiratory NADH dehydrogenase 2/cupric reductase;protein_id=AAC74193.1;db_xref=GI:1787352;db_xref=ASAP:ABE-0003746;db_xref=UniProtKB/Swiss-Prot:P00393;db_xref=EcoGene:EG10649 EMBL repeat_region 1167402 1167431 . + . ID=.2407;note=REP103 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 1167599 1168138 . + . ID=.2408;gene=ycfJ;locus_tag=b1110;gene_synonym=ECK1096;gene_synonym=JW1096;db_xref=EcoGene:EG12444 EMBL CDS 1167599 1168138 . + 0 ID=.2409;gene=ycfJ;locus_tag=b1110;gene_synonym=ECK1096;gene_synonym=JW1096;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC74194.1;db_xref=GI:1787353;db_xref=ASAP:ABE-0003752;db_xref=UniProtKB/Swiss-Prot:P0AB35;db_xref=EcoGene:EG12444 EMBL gene 1168200 1168832 . - . ID=.2410;gene=ycfQ;locus_tag=b1111;gene_synonym=ECK1097;gene_synonym=JW5159;db_xref=EcoGene:EG13435 EMBL CDS 1168200 1168832 . - 0 ID=.2411;gene=ycfQ;locus_tag=b1111;gene_synonym=ECK1097;gene_synonym=JW5159;function=regulator%3B Not classified;note=GO_process: GO:0006355 - regulation of transcription%2C DNA-dependent;codon_start=1;transl_table=11;product=repressor for bhsA(ycfR);protein_id=AAC74195.2;db_xref=GI:87081833;db_xref=ASAP:ABE-0003754;db_xref=UniProtKB/Swiss-Prot:P75952;db_xref=EcoGene:EG13435 EMBL gene 1169073 1169330 . + . ID=.2412;gene=bhsA;locus_tag=b1112;gene_synonym=ECK1098;gene_synonym=JW1098;gene_synonym=ycfR;db_xref=EcoGene:EG13436 EMBL CDS 1169073 1169330 . + 0 ID=.2413;gene=bhsA;locus_tag=b1112;gene_synonym=ECK1098;gene_synonym=JW1098;gene_synonym=ycfR;codon_start=1;transl_table=11;product=biofilm%2C cell surface and signaling protein;protein_id=AAC74196.1;db_xref=GI:1787355;db_xref=ASAP:ABE-0003758;db_xref=UniProtKB/Swiss-Prot:P0AB40;db_xref=EcoGene:EG13436 EMBL gene 1169412 1170374 . - . ID=.2414;gene=ldtC;locus_tag=b1113;gene_synonym=ECK1099;gene_synonym=JW5820;gene_synonym=ycfS;db_xref=EcoGene:EG13437 EMBL CDS 1169412 1170374 . - 0 ID=.2415;gene=ldtC;locus_tag=b1113;gene_synonym=ECK1099;gene_synonym=JW5820;gene_synonym=ycfS;function=enzyme%3B Murein sacculus%2C peptidoglycan;codon_start=1;transl_table=11;product=L%2CD-transpeptidase linking Lpp to murein;protein_id=AAC74197.1;db_xref=GI:1787356;db_xref=ASAP:ABE-0003760;db_xref=UniProtKB/Swiss-Prot:P75954;db_xref=EcoGene:EG13437 EMBL gene 1170518 1173964 . - . ID=.2416;gene=mfd;locus_tag=b1114;gene_synonym=ECK1100;gene_synonym=JW1100;db_xref=EcoGene:EG11619 EMBL CDS 1170518 1173964 . - 0 ID=.2417;gene=mfd;locus_tag=b1114;gene_synonym=ECK1100;gene_synonym=JW1100;function=factor%3B DNA - replication%2C repair%2C restriction/modification;note=transcription-repair coupling factor%3B mutation frequency decline%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=transcription-repair coupling factor;protein_id=AAC74198.1;db_xref=GI:1787357;db_xref=ASAP:ABE-0003763;db_xref=UniProtKB/Swiss-Prot:P30958;db_xref=EcoGene:EG11619 EMBL gene 1174092 1175165 . - . ID=.2418;gene=ycfT;locus_tag=b1115;gene_synonym=ECK1101;gene_synonym=JW1101;db_xref=EcoGene:EG13438 EMBL CDS 1174092 1175165 . - 0 ID=.2419;gene=ycfT;locus_tag=b1115;gene_synonym=ECK1101;gene_synonym=JW1101;codon_start=1;transl_table=11;product=inner membrane protein;protein_id=AAC74199.1;db_xref=GI:1787359;db_xref=ASAP:ABE-0003767;db_xref=UniProtKB/Swiss-Prot:P75955;db_xref=EcoGene:EG13438 EMBL gene 1175427 1176626 . + . ID=.2420;gene=lolC;locus_tag=b1116;gene_synonym=ECK1102;gene_synonym=JW5161;gene_synonym=ycfU;db_xref=EcoGene:EG13439 EMBL CDS 1175427 1176626 . + 0 ID=.2421;gene=lolC;locus_tag=b1116;gene_synonym=ECK1102;gene_synonym=JW5161;gene_synonym=ycfU;experiment=N-terminus verified by Edman degradation: PMID 10783239;note=membrane component of ABC superfamily%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=lipoprotein-releasing system transmembrane protein;protein_id=AAC74200.1;db_xref=GI:1787360;db_xref=ASAP:ABE-0003772;db_xref=UniProtKB/Swiss-Prot:P0ADC3;db_xref=EcoGene:EG13439 EMBL gene 1176619 1177320 . + . ID=.2422;gene=lolD;locus_tag=b1117;gene_synonym=ECK1103;gene_synonym=JW5162;gene_synonym=ycfV;db_xref=EcoGene:EG13440 EMBL CDS 1176619 1177320 . + 0 ID=.2423;gene=lolD;locus_tag=b1117;gene_synonym=ECK1103;gene_synonym=JW5162;gene_synonym=ycfV;function=putative transport%3B Not classified;experiment=N-terminus verified by Edman degradation: PMID 10783239;note=putative ATP-binding component of a transport system%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=outer membrane-specific lipoprotein transporter subunit;protein_id=AAC74201.2;db_xref=GI:87081834;db_xref=ASAP:ABE-0003774;db_xref=UniProtKB/Swiss-Prot:P75957;db_xref=EcoGene:EG13440 EMBL gene 1177320 1178564 . + . ID=.2424;gene=lolE;locus_tag=b1118;gene_synonym=ECK1104;gene_synonym=JW1104;gene_synonym=ycfW;db_xref=EcoGene:EG13441 EMBL CDS 1177320 1178564 . + 0 ID=.2425;gene=lolE;locus_tag=b1118;gene_synonym=ECK1104;gene_synonym=JW1104;gene_synonym=ycfW;function=putative enzyme%3B Not classified;note=putative kinase%3B membrane component of ABC superfamily%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=lipoprotein-releasing system transmembrane protein;protein_id=AAC74202.1;db_xref=GI:1787362;db_xref=ASAP:ABE-0003776;db_xref=UniProtKB/Swiss-Prot:P75958;db_xref=EcoGene:EG13441 EMBL gene 1178593 1179504 . + . ID=.2426;gene=nagK;locus_tag=b1119;gene_synonym=ECK1105;gene_synonym=JW1105;gene_synonym=ycfX;db_xref=EcoGene:EG13442 EMBL CDS 1178593 1179504 . + 0 ID=.2427;gene=nagK;locus_tag=b1119;gene_synonym=ECK1105;gene_synonym=JW1105;gene_synonym=ycfX;ec_number=2.7.1.59;experiment=N-terminus verified by Edman degradation: PMID 15489439;note=GO_process: GO:0006355 - regulation of transcription%2C DNA-dependent;codon_start=1;transl_table=11;product=N-acetyl-D-glucosamine kinase;protein_id=AAC74203.1;db_xref=GI:1787363;db_xref=ASAP:ABE-0003778;db_xref=UniProtKB/Swiss-Prot:P75959;db_xref=EcoGene:EG13442 EMBL gene 1179631 1180359 . + . ID=.2428;gene=cobB;locus_tag=b1120;gene_synonym=ECK1106;gene_synonym=JW1106;gene_synonym=npdA;gene_synonym=ycfY;db_xref=EcoGene:EG13443 EMBL CDS 1179631 1180359 . + 0 ID=.2429;gene=cobB;locus_tag=b1120;gene_synonym=ECK1106;gene_synonym=JW1106;gene_synonym=npdA;gene_synonym=ycfY;note=putative nicotinic acid mononucleotide:5%2C6-dimethylbenzimidazole (DMB) phosphoribosyltransferase%3B GO_process: GO:0006355 - regulation of transcription%2C DNA-dependent;codon_start=1;transl_table=11;product=deacetylase of acs and cheY%2C chemotaxis regulator;protein_id=AAC74204.2;db_xref=GI:308199517;db_xref=ASAP:ABE-0003781;db_xref=UniProtKB/Swiss-Prot:P75960;db_xref=EcoGene:EG13443 EMBL repeat_region 1180354 1180449 . + . ID=.2430;note=RIP104 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 1180479 1181267 . - . ID=.2431;gene=ycfZ;locus_tag=b1121;gene_synonym=ECK1107;gene_synonym=JW1107;db_xref=EcoGene:EG13444 EMBL CDS 1180479 1181267 . - 0 ID=.2432;gene=ycfZ;locus_tag=b1121;gene_synonym=ECK1107;gene_synonym=JW1107;function=putative factor%3B Not classified;codon_start=1;transl_table=11;product=inner membrane protein;protein_id=AAC74205.1;db_xref=GI:1787365;db_xref=ASAP:ABE-0003784;db_xref=UniProtKB/Swiss-Prot:P75961;db_xref=EcoGene:EG13444 EMBL gene 1181264 1181725 . - . ID=.2433;gene=ymfA;locus_tag=b1122;gene_synonym=ECK1108;gene_synonym=JW5164;db_xref=EcoGene:EG13445 EMBL CDS 1181264 1181725 . - 0 ID=.2434;gene=ymfA;locus_tag=b1122;gene_synonym=ECK1108;gene_synonym=JW5164;codon_start=1;transl_table=11;product=DUF3592 family inner membrane protein;protein_id=AAC74206.2;db_xref=GI:87081835;db_xref=ASAP:ABE-0003786;db_xref=UniProtKB/Swiss-Prot:P75962;db_xref=EcoGene:EG13445 EMBL gene 1181783 1182829 . - . ID=.2435;gene=potD;locus_tag=b1123;gene_synonym=ECK1109;gene_synonym=JW1109;db_xref=EcoGene:EG10752 EMBL CDS 1181783 1182829 . - 0 ID=.2436;gene=potD;locus_tag=b1123;gene_synonym=ECK1109;gene_synonym=JW1109;function=transport%3B Transport of small molecules: Amino acids%2C amines;note=spermidine/putrescine periplasmic transport protein%3B periplasmic-binding component of ABC superfamily%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0006596 - polyamine biosynthetic process%3B GO_process: GO:0009310 - amine catabolic process;codon_start=1;transl_table=11;product=spermidine/putrescine ABC transporter periplasmic binding protein;protein_id=AAC74207.1;db_xref=GI:1787367;db_xref=ASAP:ABE-0003789;db_xref=UniProtKB/Swiss-Prot:P0AFK9;db_xref=EcoGene:EG10752 EMBL gene 1182826 1183620 . - . ID=.2437;gene=potC;locus_tag=b1124;gene_synonym=ECK1110;gene_synonym=JW1110;db_xref=EcoGene:EG10751 EMBL CDS 1182826 1183620 . - 0 ID=.2438;gene=potC;locus_tag=b1124;gene_synonym=ECK1110;gene_synonym=JW1110;function=transport%3B Transport of small molecules: Amino acids%2C amines;note=spermidine/putrescine transport system permease%3B membrane component of ABC superfamily%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006596 - polyamine biosynthetic process%3B GO_process: GO:0009310 - amine catabolic process;codon_start=1;transl_table=11;product=spermidine/putrescine ABC transporter permease;protein_id=AAC74208.1;db_xref=GI:1787368;db_xref=ASAP:ABE-0003791;db_xref=UniProtKB/Swiss-Prot:P0AFK6;db_xref=EcoGene:EG10751 EMBL gene 1183617 1184444 . - . ID=.2439;gene=potB;locus_tag=b1125;gene_synonym=ECK1111;gene_synonym=JW1111;db_xref=EcoGene:EG10750 EMBL CDS 1183617 1184444 . - 0 ID=.2440;gene=potB;locus_tag=b1125;gene_synonym=ECK1111;gene_synonym=JW1111;function=transport%3B Transport of small molecules: Amino acids%2C amines;note=spermidine/putrescine transport system permease%3B membrane component of ABC superfamily%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006596 - polyamine biosynthetic process%3B GO_process: GO:0009310 - amine catabolic process;codon_start=1;transl_table=11;product=spermidine/putrescine ABC transporter permease;protein_id=AAC74209.1;db_xref=GI:1787369;db_xref=ASAP:ABE-0003794;db_xref=UniProtKB/Swiss-Prot:P0AFK4;db_xref=EcoGene:EG10750 EMBL gene 1184458 1185594 . - . ID=.2441;gene=potA;locus_tag=b1126;gene_synonym=ECK1112;gene_synonym=JW1112;db_xref=EcoGene:EG10749 EMBL CDS 1184458 1185594 . - 0 ID=.2442;gene=potA;locus_tag=b1126;gene_synonym=ECK1112;gene_synonym=JW1112;function=transport%3B Transport of small molecules: Amino acids%2C amines;note=ATP-binding component of spermidine/putrescine transport%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006596 - polyamine biosynthetic process%3B GO_process: GO:0009310 - amine catabolic process;codon_start=1;transl_table=11;product=spermidine/putrescine ABC transporter ATPase;protein_id=AAC74210.1;db_xref=GI:1787370;db_xref=ASAP:ABE-0003796;db_xref=UniProtKB/Swiss-Prot:P69874;db_xref=EcoGene:EG10749 EMBL gene 1185844 1187070 . + . ID=.2443;gene=pepT;locus_tag=b1127;gene_synonym=ECK1113;gene_synonym=JW1113;db_xref=EcoGene:EG11549 EMBL CDS 1185844 1187070 . + 0 ID=.2444;gene=pepT;locus_tag=b1127;gene_synonym=ECK1113;gene_synonym=JW1113;function=enzyme%3B Degradation of proteins%2C peptides%2C glyco;note=putative peptidase T;codon_start=1;transl_table=11;product=peptidase T;protein_id=AAC74211.1;db_xref=GI:1787372;db_xref=ASAP:ABE-0003800;db_xref=UniProtKB/Swiss-Prot:P29745;db_xref=EcoGene:EG11549 EMBL repeat_region 1187083 1187106 . + . ID=.2445;note=REP105 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 1187119 1188240 . - . ID=.2446;gene=roxA;locus_tag=b1128;gene_synonym=ECK1114;gene_synonym=JW1114;gene_synonym=ycfD;db_xref=EcoGene:EG11430 EMBL CDS 1187119 1188240 . - 0 ID=.2447;gene=roxA;locus_tag=b1128;gene_synonym=ECK1114;gene_synonym=JW1114;gene_synonym=ycfD;ec_number=1.14.11.-;function=enzyme%3B Proteins - translation and modification;codon_start=1;transl_table=11;product=50S ribosomal protein L16 arginine hydroxylase%3B 2-oxoglutarate oxygenase;protein_id=AAC74212.2;db_xref=GI:87081836;db_xref=ASAP:ABE-0003802;db_xref=UniProtKB/Swiss-Prot:P27431;db_xref=EcoGene:EG11430 EMBL gene 1188316 1189776 . - . ID=.2448;gene=phoQ;locus_tag=b1129;gene_synonym=ECK1115;gene_synonym=JW1115;db_xref=EcoGene:EG10732 EMBL CDS 1188316 1189776 . - 0 ID=.2449;gene=phoQ;locus_tag=b1129;gene_synonym=ECK1115;gene_synonym=JW1115;function=enzyme%3B Global regulatory functions;note=sensor protein PhoQ%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=sensory histidine kinase in two-component regulatory system with PhoP;protein_id=AAC74213.1;db_xref=GI:1787374;db_xref=ASAP:ABE-0003805;db_xref=UniProtKB/Swiss-Prot:P23837;db_xref=EcoGene:EG10732 EMBL gene 1189776 1190447 . - . ID=.2450;gene=phoP;locus_tag=b1130;gene_synonym=ECK1116;gene_synonym=JW1116;db_xref=EcoGene:EG10731 EMBL CDS 1189776 1190447 . - 0 ID=.2451;gene=phoP;locus_tag=b1130;gene_synonym=ECK1116;gene_synonym=JW1116;function=regulator%3B Global regulatory functions;note=transcriptional regulatory protein%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=response regulator in two-component regulatory system with PhoQ;protein_id=AAC74214.1;db_xref=GI:1787375;db_xref=ASAP:ABE-0003807;db_xref=UniProtKB/Swiss-Prot:P23836;db_xref=EcoGene:EG10731 EMBL repeat_region 1190580 1190602 . + . ID=.2452;note=REP106 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 1190616 1191986 . - . ID=.2453;gene=purB;locus_tag=b1131;gene_synonym=ade;gene_synonym=ECK1117;gene_synonym=JW1117;db_xref=EcoGene:EG11314 EMBL CDS 1190616 1191986 . - 0 ID=.2454;gene=purB;locus_tag=b1131;gene_synonym=ade;gene_synonym=ECK1117;gene_synonym=JW1117;ec_number=4.3.2.2;function=enzyme%3B Purine ribonucleotide biosynthesis;experiment=N-terminus verified by Edman degradation: PMID 1729205;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006164 - purine nucleotide biosynthetic process;codon_start=1;transl_table=11;product=adenylosuccinate lyase;protein_id=AAC74215.1;db_xref=GI:1787376;db_xref=ASAP:ABE-0003810;db_xref=UniProtKB/Swiss-Prot:P0AB89;db_xref=EcoGene:EG11314 EMBL gene 1191990 1192631 . - . ID=.2455;gene=hflD;locus_tag=b1132;gene_synonym=ECK1118;gene_synonym=hslZ;gene_synonym=JW5165;gene_synonym=ycfC;db_xref=EcoGene:EG11345 EMBL CDS 1191990 1192631 . - 0 ID=.2456;gene=hflD;locus_tag=b1132;gene_synonym=ECK1118;gene_synonym=hslZ;gene_synonym=JW5165;gene_synonym=ycfC;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative lysogenization regulator;protein_id=AAC74216.1;db_xref=GI:1787377;db_xref=ASAP:ABE-0003812;db_xref=UniProtKB/Swiss-Prot:P25746;db_xref=EcoGene:EG11345 EMBL gene 1192667 1193773 . - . ID=.2457;gene=mnmA;locus_tag=b1133;gene_synonym=asuE;gene_synonym=ECK1119;gene_synonym=JW1119;gene_synonym=trmU;gene_synonym=ycfB;db_xref=EcoGene:EG11344 EMBL CDS 1192667 1193773 . - 0 ID=.2458;gene=mnmA;locus_tag=b1133;gene_synonym=asuE;gene_synonym=ECK1119;gene_synonym=JW1119;gene_synonym=trmU;gene_synonym=ycfB;ec_number=2.1.1.61;function=enzyme%3B tRNA modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009451 - RNA modification;codon_start=1;transl_table=11;product=tRNA(Gln%2CLys%2CGlu) U34 2-thiouridylase;protein_id=AAC74217.2;db_xref=GI:87081837;db_xref=ASAP:ABE-0003815;db_xref=UniProtKB/Swiss-Prot:P25745;db_xref=EcoGene:EG11344 EMBL gene 1193827 1194288 . - . ID=.2459;gene=nudJ;locus_tag=b1134;gene_synonym=ECK1120;gene_synonym=JW1120;gene_synonym=ymfB;db_xref=EcoGene:EG13446 EMBL CDS 1193827 1194288 . - 0 ID=.2460;gene=nudJ;locus_tag=b1134;gene_synonym=ECK1120;gene_synonym=JW1120;gene_synonym=ymfB;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=bifunctional thiamine pyrimidine pyrophosphate hydrolase and thiamine pyrophosphate hydrolase;protein_id=AAC74218.1;db_xref=GI:1787379;db_xref=ASAP:ABE-0003818;db_xref=UniProtKB/Swiss-Prot:P0AEI6;db_xref=EcoGene:EG13446 EMBL gene 1194298 1194951 . - . ID=.2461;gene=rluE;locus_tag=b1135;gene_synonym=ECK1121;gene_synonym=JW1121;gene_synonym=ymfC;db_xref=EcoGene:EG13447 EMBL CDS 1194298 1194951 . - 0 ID=.2462;gene=rluE;locus_tag=b1135;gene_synonym=ECK1121;gene_synonym=JW1121;gene_synonym=ymfC;ec_number=4.2.1.70;function=enzyme%3B rRNA modification;note=GO_process: GO:0009451 - RNA modification;codon_start=1;transl_table=11;product=23S rRNA pseudouridine(2457) synthase;protein_id=AAC74219.2;db_xref=GI:87081838;db_xref=ASAP:ABE-0003820;db_xref=UniProtKB/Swiss-Prot:P75966;db_xref=EcoGene:EG13447 EMBL gene 1195123 1196373 . + . ID=.2463;gene=icd;locus_tag=b1136;gene_synonym=ECK1122;gene_synonym=icdA;gene_synonym=icdE;gene_synonym=JW1122;db_xref=EcoGene:EG10489 EMBL CDS 1195123 1196373 . + 0 ID=.2464;gene=icd;locus_tag=b1136;gene_synonym=ECK1122;gene_synonym=icdA;gene_synonym=icdE;gene_synonym=JW1122;ec_number=1.1.1.42;function=enzyme%3B Energy metabolism%2C carbon: TCA cycle%3B Phage or Prophage Related;experiment=N-terminus verified by Edman degradation: PMID 9298646;note=isocitrate dehydrogenase%2C specific for NADP+%3B GO_process: GO:0006099 - tricarboxylic acid cycle%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=isocitrate dehydrogenase%3B e14 prophage attachment site%3B tellurite reductase;protein_id=AAC74220.1;db_xref=GI:1787381;db_xref=ASAP:ABE-0003823;db_xref=UniProtKB/Swiss-Prot:P08200;db_xref=EcoGene:EG10489 EMBL sequence_feature 1196220 1211412 . + . ID=.2465;note=cryptic prophage e14 EMBL gene 1196867 1197532 . - . ID=.2466;gene=ymfD;locus_tag=b1137;gene_synonym=ECK1123;gene_synonym=JW1123;db_xref=EcoGene:EG13448 EMBL CDS 1196867 1197532 . - 0 ID=.2467;gene=ymfD;locus_tag=b1137;gene_synonym=ECK1123;gene_synonym=JW1123;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=e14 prophage%3B putative SAM-dependent methyltransferase;protein_id=AAC74221.1;db_xref=GI:1787383;db_xref=ASAP:ABE-0003825;db_xref=UniProtKB/Swiss-Prot:P75967;db_xref=EcoGene:EG13448 EMBL gene 1197533 1198237 . - . ID=.2468;gene=ymfE;locus_tag=b1138;gene_synonym=ECK1124;gene_synonym=JW5166;db_xref=EcoGene:EG13449 EMBL CDS 1197533 1198237 . - 0 ID=.2469;gene=ymfE;locus_tag=b1138;gene_synonym=ECK1124;gene_synonym=JW5166;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=e14 prophage%3B putative inner membrane protein;protein_id=AAC74222.1;db_xref=GI:1787384;db_xref=ASAP:ABE-0003827;db_xref=UniProtKB/Swiss-Prot:P75968;db_xref=EcoGene:EG13449 EMBL gene 1198695 1199588 . + . ID=.2470;gene=lit;locus_tag=b1139;gene_synonym=ECK1125;gene_synonym=JW1125;db_xref=EcoGene:EG10535 EMBL CDS 1198695 1199588 . + 0 ID=.2471;gene=lit;locus_tag=b1139;gene_synonym=ECK1125;gene_synonym=JW1125;function=membrane%3B Phage or Prophage Related;note=phage T4 late gene expression%3B at locus of e14 element;codon_start=1;transl_table=11;product=T4 phage exclusion protein%3B cell death peptidase%2C e14 prophage;protein_id=AAC74223.1;db_xref=GI:1787385;db_xref=ASAP:ABE-0003834;db_xref=UniProtKB/Swiss-Prot:P11072;db_xref=EcoGene:EG10535 EMBL gene 1199679 1200806 . - . ID=.2472;gene=intE;locus_tag=b1140;gene_synonym=ECK1126;gene_synonym=int;gene_synonym=JW1126;gene_synonym=ycfI;db_xref=EcoGene:EG12370 EMBL CDS 1199679 1200806 . - 0 ID=.2473;gene=intE;locus_tag=b1140;gene_synonym=ECK1126;gene_synonym=int;gene_synonym=JW1126;gene_synonym=ycfI;function=Phage or Prophage Related;note=prophage e14 integrase;codon_start=1;transl_table=11;product=e14 prophage%3B putative integrase;protein_id=AAC74224.1;db_xref=GI:1787386;db_xref=ASAP:ABE-0003836;db_xref=UniProtKB/Swiss-Prot:P75969;db_xref=EcoGene:EG12370 EMBL gene 1200787 1201032 . - . ID=.2474;gene=xisE;locus_tag=b1141;gene_synonym=ECK1127;gene_synonym=JW1127;gene_synonym=Vxis;gene_synonym=ymfG;db_xref=EcoGene:EG14245 EMBL CDS 1200787 1201032 . - 0 ID=.2475;gene=xisE;locus_tag=b1141;gene_synonym=ECK1127;gene_synonym=JW1127;gene_synonym=Vxis;gene_synonym=ymfG;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=e14 prophage%3B putative excisionase;protein_id=AAC74225.1;db_xref=GI:1787387;db_xref=ASAP:ABE-0003838;db_xref=UniProtKB/Swiss-Prot:P75970;db_xref=EcoGene:EG14245 EMBL gene 1201497 1201838 . + . ID=.2476;gene=ymfI;locus_tag=b1143;gene_synonym=ECK1129;gene_synonym=JW5168;db_xref=EcoGene:EG14247 EMBL CDS 1201497 1201838 . + 0 ID=.2477;gene=ymfI;locus_tag=b1143;gene_synonym=ECK1129;gene_synonym=JW5168;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=e14 prophage%3B uncharacterized protein;protein_id=AAC74227.2;db_xref=GI:87081839;db_xref=ASAP:ABE-0003846;db_xref=UniProtKB/Swiss-Prot:P75972;db_xref=EcoGene:EG14247 EMBL gene 1201776 1202084 . - . ID=.2478;gene=ymfJ;locus_tag=b1144;gene_synonym=ECK1130;db_xref=EcoGene:EG14248 EMBL CDS 1201776 1202084 . - 0 ID=.2479;gene=ymfJ;locus_tag=b1144;gene_synonym=ECK1130;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=e14 prophage%3B uncharacterized protein;protein_id=AAC74228.2;db_xref=GI:87081840;db_xref=ASAP:ABE-0003848;db_xref=UniProtKB/Swiss-Prot:P75973;db_xref=EcoGene:EG14248 EMBL gene 1202259 1202933 . - . ID=.2480;gene=cohE;locus_tag=b1145;gene_synonym=ECK1131;gene_synonym=JW1131;gene_synonym=ymfK;db_xref=EcoGene:EG14249 EMBL CDS 1202259 1202933 . - 0 ID=.2481;gene=cohE;locus_tag=b1145;gene_synonym=ECK1131;gene_synonym=JW1131;gene_synonym=ymfK;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=e14 prophage%3B repressor protein phage e14;protein_id=AAC74229.1;db_xref=GI:1787391;db_xref=ASAP:ABE-0003851;db_xref=UniProtKB/Swiss-Prot:P75974;db_xref=EcoGene:EG14249 EMBL gene 1203024 1203224 . + . ID=.2482;gene=croE;locus_tag=b1146;gene_synonym=ECK4469;gene_synonym=JW5169;gene_synonym=ymfT;db_xref=EcoGene:EG14414 EMBL CDS 1203024 1203224 . + 0 ID=.2483;gene=croE;locus_tag=b1146;gene_synonym=ECK4469;gene_synonym=JW5169;gene_synonym=ymfT;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=e14 prophage%3B putative DNA-binding transcriptional regulator;protein_id=AAC74230.2;db_xref=GI:87081841;db_xref=ASAP:ABE-0003856;db_xref=UniProtKB/Swiss-Prot:P75975;db_xref=EcoGene:EG14414 EMBL gene 1203268 1203825 . + . ID=.2484;gene=ymfL;locus_tag=b1147;gene_synonym=ECK1133;gene_synonym=JW1133;db_xref=EcoGene:EG14250 EMBL CDS 1203268 1203825 . + 0 ID=.2485;gene=ymfL;locus_tag=b1147;gene_synonym=ECK1133;gene_synonym=JW1133;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=e14 prophage%3B putative DNA-binding transcriptional regulator;protein_id=AAC74231.2;db_xref=GI:145693113;db_xref=ASAP:ABE-0003860;db_xref=UniProtKB/Swiss-Prot:P75976;db_xref=EcoGene:EG14250 EMBL gene 1203822 1204160 . + . ID=.2486;gene=ymfM;locus_tag=b1148;gene_synonym=ECK1134;gene_synonym=JW1134;db_xref=EcoGene:EG14251 EMBL CDS 1203822 1204160 . + 0 ID=.2487;gene=ymfM;locus_tag=b1148;gene_synonym=ECK1134;gene_synonym=JW1134;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=e14 prophage%3B uncharacterized protein;protein_id=AAC74232.1;db_xref=GI:1787394;db_xref=ASAP:ABE-0003862;db_xref=UniProtKB/Swiss-Prot:P75977;db_xref=EcoGene:EG14251 EMBL gene 1204170 1204403 . + . ID=.2488;gene=oweE;locus_tag=b4692;gene_synonym=ECK4507;pseudo=true;db_xref=EcoGene:EG14495 EMBL CDS 1204170 1204403 . + 0 ID=.2489;gene=oweE;locus_tag=b4692;gene_synonym=ECK4507;note=pseudogene%2C lambda replication protein O homolog%3B CPS-53/KpLE1 prophage%3BPhage or Prophage Related;pseudo=true;codon_start=1;transl_table=11;db_xref=EcoGene:EG14495 EMBL gene 1204404 1205537 . + . ID=.2490;gene=aaaE;locus_tag=b4693;gene_synonym=ECK1135;gene_synonym=JW1135;gene_synonym=ymfN;pseudo=true;db_xref=EcoGene:EG14252 EMBL CDS 1204404 1205537 . + 0 ID=.2491;gene=aaaE;locus_tag=b4693;gene_synonym=ECK1135;gene_synonym=JW1135;gene_synonym=ymfN;note=pseudogene%2C phage terminase protein A family%2C e14 prophage%3BPhage or Prophage Related;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0003865;db_xref=UniProtKB/Swiss-Prot:P75978;db_xref=EcoGene:EG14252 EMBL gene 1205549 1205731 . + . ID=.2492;gene=ymfR;locus_tag=b1150;gene_synonym=ECK1136;gene_synonym=JW1136;db_xref=EcoGene:EG14336 EMBL CDS 1205549 1205731 . + 0 ID=.2493;gene=ymfR;locus_tag=b1150;gene_synonym=ECK1136;gene_synonym=JW1136;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=e14 prophage%3B uncharacterized protein;protein_id=AAC74234.1;db_xref=GI:1787396;db_xref=ASAP:ABE-0003868;db_xref=UniProtKB/Swiss-Prot:P75979;db_xref=EcoGene:EG14336 EMBL gene 1205731 1206142 . + . ID=.2494;gene=beeE;locus_tag=b1151;gene_synonym=ECK1137;gene_synonym=JW1137;gene_synonym=ymfO;pseudo=true;db_xref=EcoGene:EG14253 EMBL CDS 1205731 1206142 . + 0 ID=.2495;gene=beeE;locus_tag=b1151;gene_synonym=ECK1137;gene_synonym=JW1137;gene_synonym=ymfO;note=pseudogene%2C portal protein family%2C e14 prophage%3BPhage or Prophage Related;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0003870;db_xref=UniProtKB/Swiss-Prot:P75980;db_xref=EcoGene:EG14253 EMBL gene 1206143 1206922 . + . ID=.2496;gene=jayE;locus_tag=b1152;gene_synonym=ECK1138;gene_synonym=JW5170;gene_synonym=ymfP;pseudo=true;db_xref=EcoGene:EG14254 EMBL CDS 1206143 1206922 . + 0 ID=.2497;gene=jayE;locus_tag=b1152;gene_synonym=ECK1138;gene_synonym=JW5170;gene_synonym=ymfP;note=pseudogene%2C e14 prophage%3BPhage or Prophage Related;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0003872;db_xref=UniProtKB/Swiss-Prot:P75981;db_xref=EcoGene:EG14254 EMBL gene 1206913 1207497 . + . ID=.2498;gene=ymfQ;locus_tag=b1153;gene_synonym=ECK1139;gene_synonym=JW1139;db_xref=EcoGene:EG14255 EMBL CDS 1206913 1207497 . + 0 ID=.2499;gene=ymfQ;locus_tag=b1153;gene_synonym=ECK1139;gene_synonym=JW1139;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=prohage e14 tail protein homolog;protein_id=AAC74237.1;db_xref=GI:1787399;db_xref=ASAP:ABE-0003874;db_xref=UniProtKB/Swiss-Prot:P75982;db_xref=EcoGene:EG14255 EMBL gene 1207501 1208130 . + . ID=.2500;gene=stfP;locus_tag=b1154;gene_synonym=ECK1140;gene_synonym=JW1140;gene_synonym=ycfK;db_xref=EcoGene:EG12877 EMBL CDS 1207501 1208130 . + 0 ID=.2501;gene=stfP;locus_tag=b1154;gene_synonym=ECK1140;gene_synonym=JW1140;gene_synonym=ycfK;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=e14 prophage%3B uncharacterized protein;protein_id=AAC74238.1;db_xref=GI:1787400;db_xref=ASAP:ABE-0003876;db_xref=UniProtKB/Swiss-Prot:P45581;db_xref=EcoGene:EG12877 EMBL gene 1208132 1208545 . + . ID=.2502;gene=tfaP;locus_tag=b1155;gene_synonym=ECK1141;gene_synonym=JW5171;gene_synonym=ymfS;db_xref=EcoGene:EG14337 EMBL CDS 1208132 1208545 . + 0 ID=.2503;gene=tfaP;locus_tag=b1155;gene_synonym=ECK1141;gene_synonym=JW5171;gene_synonym=ymfS;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=e14 prophage%3B uncharacterized protein;protein_id=AAC74239.1;db_xref=GI:1787401;db_xref=ASAP:ABE-0003878;db_xref=UniProtKB/Swiss-Prot:P09154;db_xref=EcoGene:EG14337 EMBL gene 1208517 1209119 . - . ID=.2504;gene=tfaE;locus_tag=b1156;gene_synonym=ECK1142;gene_synonym=JW1142;gene_synonym=ycfA;db_xref=EcoGene:EG11120 EMBL CDS 1208517 1209119 . - 0 ID=.2505;gene=tfaE;locus_tag=b1156;gene_synonym=ECK1142;gene_synonym=JW1142;gene_synonym=ycfA;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=e14 prophage%3B putative tail fiber assembly protein;protein_id=AAC74240.1;db_xref=GI:1787402;db_xref=ASAP:ABE-0003880;db_xref=UniProtKB/Swiss-Prot:P09153;db_xref=EcoGene:EG11120 EMBL gene 1209119 1209619 . - . ID=.2506;gene=stfE;locus_tag=b1157;gene_synonym=ECK1143;gene_synonym=JW5172;gene_synonym=ycfE;pseudo=true;db_xref=EcoGene:EG11818 EMBL CDS 1209119 1209619 . - 0 ID=.2507;gene=stfE;locus_tag=b1157;gene_synonym=ECK1143;gene_synonym=JW5172;gene_synonym=ycfE;note=pseudogene%2C e14 prophage%3B side tail fiber protein fragment family%3BPhage or Prophage Related;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0003882;db_xref=UniProtKB/Swiss-Prot:P33227;db_xref=EcoGene:EG11818 EMBL gene 1209685 1210239 . + . ID=.2508;gene=pinE;locus_tag=b1158;gene_synonym=ECK1144;gene_synonym=JW1144;gene_synonym=pin;db_xref=EcoGene:EG10737 EMBL CDS 1209685 1210239 . + 0 ID=.2509;gene=pinE;locus_tag=b1158;gene_synonym=ECK1144;gene_synonym=JW1144;gene_synonym=pin;function=membrane%3B Phage or Prophage Related;note=inversion of adjacent DNA%3B at locus of e14 element;codon_start=1;transl_table=11;product=e14 prophage%3B site-specific DNA recombinase;protein_id=AAC74242.1;db_xref=GI:1787404;db_xref=ASAP:ABE-0003888;db_xref=UniProtKB/Swiss-Prot:P03014;db_xref=EcoGene:EG10737 EMBL gene 1210346 1211179 . + . ID=.2510;gene=mcrA;locus_tag=b1159;gene_synonym=ECK1145;gene_synonym=JW1145;gene_synonym=rglA;db_xref=EcoGene:EG10573 EMBL CDS 1210346 1211179 . + 0 ID=.2511;gene=mcrA;locus_tag=b1159;gene_synonym=ECK1145;gene_synonym=JW1145;gene_synonym=rglA;ec_number=3.1.21.-;function=putative enzyme%3B Phage or Prophage Related;note=restriction of DNA at 5-methylcytosine residues%3B at locus of e14 element;codon_start=1;transl_table=11;product=putative 5-methylcytosine/5-hydroxymethylcytosine-specific restriction nuclease%3B 5-methylcytosine DNA binding protein;protein_id=AAC74243.1;db_xref=GI:1787406;db_xref=ASAP:ABE-0003891;db_xref=UniProtKB/Swiss-Prot:P24200;db_xref=EcoGene:EG10573 EMBL gene 1211413 1211577 . + . ID=.2512;gene=icdC;locus_tag=b4519;gene_synonym=ECK1146;gene_synonym=icd;gene_synonym=JW5173;pseudo=true;db_xref=EcoGene:EG10009 EMBL CDS 1211413 1211577 . + 0 ID=.2513;gene=icdC;locus_tag=b4519;gene_synonym=ECK1146;gene_synonym=icd;gene_synonym=JW5173;note=pseudogene%2C isocitrate dehydrogenase C-terminal gene fragment%3B idcC' is a 54 codon 3' gene fragment created during e14 prophage insertion%3B GO_component: GO:0005737 - cytoplasm;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0285040;db_xref=EcoGene:EG10009 EMBL gene 1211680 1212003 . - . ID=.2514;gene=iraM;locus_tag=b1160;gene_synonym=ECK1147;gene_synonym=elb1;gene_synonym=elbA;gene_synonym=JW1147;gene_synonym=ycgW;db_xref=EcoGene:EG13885 EMBL CDS 1211680 1212003 . - 0 ID=.2515;gene=iraM;locus_tag=b1160;gene_synonym=ECK1147;gene_synonym=elb1;gene_synonym=elbA;gene_synonym=JW1147;gene_synonym=ycgW;codon_start=1;transl_table=11;product=RpoS stabilzer during Mg starvation%2C anti-RssB factor;protein_id=AAC74244.1;db_xref=GI:1787407;db_xref=ASAP:ABE-0003893;db_xref=UniProtKB/Swiss-Prot:P75987;db_xref=EcoGene:EG13885 EMBL gene 1212703 1213107 . - . ID=.2516;gene=ycgX;locus_tag=b1161;gene_synonym=ECK1148;gene_synonym=JW1148;db_xref=EcoGene:EG14244 EMBL CDS 1212703 1213107 . - 0 ID=.2517;gene=ycgX;locus_tag=b1161;gene_synonym=ECK1148;gene_synonym=JW1148;codon_start=1;transl_table=11;product=DUF1398 family protein;protein_id=AAC74245.1;db_xref=GI:1787408;db_xref=ASAP:ABE-0003897;db_xref=UniProtKB/Swiss-Prot:P75988;db_xref=EcoGene:EG14244 EMBL gene 1213328 1214059 . - . ID=.2518;gene=bluR;locus_tag=b1162;gene_synonym=ECK1149;gene_synonym=JW1149;gene_synonym=ycgE;db_xref=EcoGene:EG13886 EMBL CDS 1213328 1214059 . - 0 ID=.2519;gene=bluR;locus_tag=b1162;gene_synonym=ECK1149;gene_synonym=JW1149;gene_synonym=ycgE;function=putative regulator%3B Not classified;note=putative transcriptional regulator%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=repressor of blue light-responsive genes;protein_id=AAC74246.1;db_xref=GI:1787409;db_xref=ASAP:ABE-0003900;db_xref=UniProtKB/Swiss-Prot:P75989;db_xref=EcoGene:EG13886 EMBL gene 1214264 1215475 . - . ID=.2520;gene=bluF;locus_tag=b1163;gene_synonym=ECK1150;gene_synonym=JW1150;gene_synonym=ycgF;db_xref=EcoGene:EG13887 EMBL CDS 1214264 1215475 . - 0 ID=.2521;gene=bluF;locus_tag=b1163;gene_synonym=ECK1150;gene_synonym=JW1150;gene_synonym=ycgF;codon_start=1;transl_table=11;product=anti-repressor for YcgE%2C blue light-responsive%3B FAD-binding%3B inactive c-di-GMP phosphodiesterase-like EAL domain protein;protein_id=AAC74247.1;db_xref=GI:1787410;db_xref=ASAP:ABE-0003903;db_xref=UniProtKB/Swiss-Prot:P75990;db_xref=EcoGene:EG13887 EMBL gene 1215789 1216025 . + . ID=.2522;gene=ycgZ;locus_tag=b1164;gene_synonym=ECK1151;gene_synonym=JW1151;db_xref=EcoGene:EG14288 EMBL CDS 1215789 1216025 . + 0 ID=.2523;gene=ycgZ;locus_tag=b1164;gene_synonym=ECK1151;gene_synonym=JW1151;codon_start=1;transl_table=11;product=RcsB connector protein for regulation of biofilm and acid-resistance;protein_id=AAC74248.1;db_xref=GI:1787411;db_xref=ASAP:ABE-0003907;db_xref=UniProtKB/Swiss-Prot:P75991;db_xref=EcoGene:EG14288 EMBL gene 1216068 1216340 . + . ID=.2524;gene=ymgA;locus_tag=b1165;gene_synonym=ECK1152;gene_synonym=JW1152;db_xref=EcoGene:EG14289 EMBL CDS 1216068 1216340 . + 0 ID=.2525;gene=ymgA;locus_tag=b1165;gene_synonym=ECK1152;gene_synonym=JW1152;codon_start=1;transl_table=11;product=RcsB connector protein for regulation of biofilm;protein_id=AAC74249.1;db_xref=GI:1787412;db_xref=ASAP:ABE-0003909;db_xref=UniProtKB/Swiss-Prot:P75992;db_xref=EcoGene:EG14289 EMBL gene 1216369 1216635 . + . ID=.2526;gene=ariR;locus_tag=b1166;gene_synonym=ECK1153;gene_synonym=JW1153;gene_synonym=ymgB;db_xref=EcoGene:EG14290 EMBL CDS 1216369 1216635 . + 0 ID=.2527;gene=ariR;locus_tag=b1166;gene_synonym=ECK1153;gene_synonym=JW1153;gene_synonym=ymgB;codon_start=1;transl_table=11;product=RcsB connector protein for regulation of biofilm and acid-resistance;protein_id=AAC74250.1;db_xref=GI:1787413;db_xref=ASAP:ABE-0003911;db_xref=UniProtKB/Swiss-Prot:P75993;db_xref=EcoGene:EG14290 EMBL gene 1216748 1216996 . + . ID=.2528;gene=ymgC;locus_tag=b1167;gene_synonym=ECK1154;gene_synonym=JW1154;db_xref=EcoGene:EG14291 EMBL CDS 1216748 1216996 . + 0 ID=.2529;gene=ymgC;locus_tag=b1167;gene_synonym=ECK1154;gene_synonym=JW1154;codon_start=1;transl_table=11;product=Blue light%2C low temperature and stress induced protein;protein_id=AAC74251.1;db_xref=GI:1787414;db_xref=ASAP:ABE-0003915;db_xref=UniProtKB/Swiss-Prot:P75994;db_xref=EcoGene:EG14291 EMBL gene 1217328 1218851 . + . ID=.2530;gene=ycgG;locus_tag=b1168;gene_synonym=ECK1155;gene_synonym=JW5174;db_xref=EcoGene:EG13888 EMBL CDS 1217328 1218851 . + 0 ID=.2531;gene=ycgG;locus_tag=b1168;gene_synonym=ECK1155;gene_synonym=JW5174;function=putative enzyme%3B Not classified;note=putative proteases;codon_start=1;transl_table=11;product=putative membrane-anchored cyclic-di-GMP phosphodiesterase;protein_id=AAC74252.2;db_xref=GI:87081845;db_xref=ASAP:ABE-0003918;db_xref=UniProtKB/Swiss-Prot:P75995;db_xref=EcoGene:EG13888 EMBL gene 1218983 1219201 . + . ID=.2532;gene=ymgF;locus_tag=b4520;gene_synonym=ECK1156;gene_synonym=JW1156;db_xref=EcoGene:EG14341 EMBL CDS 1218983 1219201 . + 0 ID=.2533;gene=ymgF;locus_tag=b4520;gene_synonym=ECK1156;gene_synonym=JW1156;note=GO_component: GO:0016021 - integral to membrane;codon_start=1;transl_table=11;product=inner membrane division septum protein;protein_id=ABD18651.1;db_xref=GI:87081846;db_xref=ASAP:ABE-0285041;db_xref=UniProtKB/Swiss-Prot:P58034;db_xref=EcoGene:EG14341 EMBL gene 1219601 1222248 . + . ID=.2534;gene=ycgH;locus_tag=b4491;gene_synonym=ECK1157;gene_synonym=JW5176;gene_synonym=JW5901;pseudo=true;db_xref=EcoGene:EG13889 EMBL biological_region 1219601 1222248 . + 0 ID=.2535;featflags=type:CDS;gene=ycgH;locus_tag=b4491;gene_synonym=ECK1157;gene_synonym=JW5176;gene_synonym=JW5901;note=pseudogene%3B putative ATP-binding component of a transport system;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0003921;db_xref=ASAP:ABE-0003924;db_xref=ASAP:ABE-0285092;db_xref=EcoGene:EG13889 EMBL CDS 1219601 1222174 . + 0 Parent=.2535 EMBL CDS 1222174 1222248 . + 0 Parent=.2535 EMBL gene 1222305 1222634 . - . ID=.2538;gene=ymgD;locus_tag=b1171;gene_synonym=ECK1158;gene_synonym=JW5177;db_xref=EcoGene:EG14292 EMBL CDS 1222305 1222634 . - 0 ID=.2539;gene=ymgD;locus_tag=b1171;gene_synonym=ECK1158;gene_synonym=JW5177;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC74255.2;db_xref=GI:87081849;db_xref=ASAP:ABE-0003926;db_xref=UniProtKB/Swiss-Prot:P0AB46;db_xref=EcoGene:EG14292 EMBL gene 1222644 1222988 . - . ID=.2540;gene=ymgG;locus_tag=b1172;gene_synonym=ECK4470;db_xref=EcoGene:EG14415 EMBL CDS 1222644 1222988 . - 0 ID=.2541;gene=ymgG;locus_tag=b1172;gene_synonym=ECK4470;codon_start=1;transl_table=11;product=UPF0757 family protein;protein_id=AAC74256.5;db_xref=GI:288549313;db_xref=ASAP:ABE-0003928;db_xref=UniProtKB/Swiss-Prot:Q7DFV3;db_xref=EcoGene:EG14415 EMBL gene 1222990 1223163 . - . ID=.2542;gene=ymgI;locus_tag=b4593;gene_synonym=ECK4403;db_xref=EcoGene:EG14449 EMBL CDS 1222990 1223163 . - 0 ID=.2543;gene=ymgI;locus_tag=b4593;gene_synonym=ECK4403;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=ABP93440.1;db_xref=GI:145693115;db_xref=UniProtKB/Swiss-Prot:A5A611;db_xref=EcoGene:EG14449 EMBL gene 1223264 1223449 . + . ID=.2544;gene=ymgJ;locus_tag=b4594;gene_synonym=ECK4404;db_xref=EcoGene:EG14450 EMBL CDS 1223264 1223449 . + 0 ID=.2545;gene=ymgJ;locus_tag=b4594;gene_synonym=ECK4404;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=ABP93441.1;db_xref=GI:145693116;db_xref=UniProtKB/Swiss-Prot:A5A612;db_xref=EcoGene:EG14450 EMBL gene 1223564 1223907 . + . ID=.2546;gene=ycgI;locus_tag=b4521;gene_synonym=ECK1161;gene_synonym=JW1162;gene_synonym=ymgH;pseudo=true;db_xref=EcoGene:EG13890 EMBL biological_region 1223564 1223907 . + 0 ID=.2547;featflags=type:CDS;gene=ycgI;locus_tag=b4521;gene_synonym=ECK1161;gene_synonym=JW1162;gene_synonym=ymgH;note=pseudogene;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0003933;db_xref=ASAP:ABE-0285042;db_xref=UniProtKB/Swiss-Prot:P76000;db_xref=EcoGene:EG13890 EMBL CDS 1223564 1223671 . + 0 Parent=.2547 EMBL CDS 1223671 1223907 . + 0 Parent=.2547 EMBL gene 1224279 1224545 . - . ID=.2550;gene=minE;locus_tag=b1174;gene_synonym=ECK1162;gene_synonym=JW1163;gene_synonym=minB;db_xref=EcoGene:EG10598 EMBL CDS 1224279 1224545 . - 0 ID=.2551;gene=minE;locus_tag=b1174;gene_synonym=ECK1162;gene_synonym=JW1163;gene_synonym=minB;function=factor%3B Cell division;note=cell division topological specificity factor%2C reverses MinC inhibition of ftsZ ring formation%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=cell division topological specificity factor;protein_id=AAC74258.1;db_xref=GI:1787422;db_xref=ASAP:ABE-0003935;db_xref=UniProtKB/Swiss-Prot:P0A734;db_xref=EcoGene:EG10598 EMBL gene 1224549 1225361 . - . ID=.2552;gene=minD;locus_tag=b1175;gene_synonym=ECK1163;gene_synonym=JW1164;gene_synonym=minB;db_xref=EcoGene:EG10597 EMBL CDS 1224549 1225361 . - 0 ID=.2553;gene=minD;locus_tag=b1175;gene_synonym=ECK1163;gene_synonym=JW1164;gene_synonym=minB;function=enzyme%3B Cell division;note=cell division inhibitor%2C a membrane ATPase%2C activates minC%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=inhibitor of FtsZ ring polymerization%3B chromosome-membrane tethering protein%3B membrane ATPase of the MinCDEE system;protein_id=AAC74259.1;db_xref=GI:1787423;db_xref=ASAP:ABE-0003938;db_xref=UniProtKB/Swiss-Prot:P0AEZ3;db_xref=EcoGene:EG10597 EMBL gene 1225385 1226080 . - . ID=.2554;gene=minC;locus_tag=b1176;gene_synonym=ECK1164;gene_synonym=JW1165;gene_synonym=minB;db_xref=EcoGene:EG10596 EMBL CDS 1225385 1226080 . - 0 ID=.2555;gene=minC;locus_tag=b1176;gene_synonym=ECK1164;gene_synonym=JW1165;gene_synonym=minB;function=factor%3B Cell division;note=cell division inhibitor%2C inhibits ftsZ ring formation%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=inhibitor of FtsZ ring polymerization;protein_id=AAC74260.1;db_xref=GI:1787424;db_xref=ASAP:ABE-0003941;db_xref=UniProtKB/Swiss-Prot:P18196;db_xref=EcoGene:EG10596 EMBL gene 1226600 1226968 . + . ID=.2556;gene=ycgJ;locus_tag=b1177;gene_synonym=ECK1165;gene_synonym=JW1166;db_xref=EcoGene:EG13891 EMBL CDS 1226600 1226968 . + 0 ID=.2557;gene=ycgJ;locus_tag=b1177;gene_synonym=ECK1165;gene_synonym=JW1166;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC74261.1;db_xref=GI:1787425;db_xref=ASAP:ABE-0003946;db_xref=UniProtKB/Swiss-Prot:P76001;db_xref=EcoGene:EG13891 EMBL gene 1227071 1227472 . - . ID=.2558;gene=pliG;locus_tag=b1178;gene_synonym=ECK1166;gene_synonym=JW1167;gene_synonym=ycgK;db_xref=EcoGene:EG13892 EMBL CDS 1227071 1227472 . - 0 ID=.2559;gene=pliG;locus_tag=b1178;gene_synonym=ECK1166;gene_synonym=JW1167;gene_synonym=ycgK;codon_start=1;transl_table=11;product=periplasmic inhibitor of g-type lysozyme;protein_id=AAC74262.1;db_xref=GI:1787426;db_xref=ASAP:ABE-0003948;db_xref=UniProtKB/Swiss-Prot:P76002;db_xref=EcoGene:EG13892 EMBL gene 1227714 1228007 . + . ID=.2560;gene=ycgL;locus_tag=b1179;gene_synonym=ECK1167;gene_synonym=JW1168;db_xref=EcoGene:EG13893 EMBL CDS 1227714 1228007 . + 0 ID=.2561;gene=ycgL;locus_tag=b1179;gene_synonym=ECK1167;gene_synonym=JW1168;codon_start=1;transl_table=11;product=UPF0745 family protein;protein_id=AAC74263.2;db_xref=GI:308199518;db_xref=ASAP:ABE-0003954;db_xref=UniProtKB/Swiss-Prot:P0AB43;db_xref=EcoGene:EG13893 EMBL gene 1228079 1228738 . + . ID=.2562;gene=ycgM;locus_tag=b1180;gene_synonym=ECK1168;gene_synonym=JW1169;db_xref=EcoGene:EG13894 EMBL CDS 1228079 1228738 . + 0 ID=.2563;gene=ycgM;locus_tag=b1180;gene_synonym=ECK1168;gene_synonym=JW1169;function=putative enzyme%3B Not classified;note=putative isomerase;codon_start=1;transl_table=11;product=putative isomerase/hydrolase;protein_id=AAC74264.1;db_xref=GI:1787428;db_xref=ASAP:ABE-0003957;db_xref=UniProtKB/Swiss-Prot:P76004;db_xref=EcoGene:EG13894 EMBL gene 1228815 1229276 . + . ID=.2564;gene=ycgN;locus_tag=b1181;gene_synonym=ECK1169;gene_synonym=JW5180;db_xref=EcoGene:EG13895 EMBL CDS 1228815 1229276 . + 0 ID=.2565;gene=ycgN;locus_tag=b1181;gene_synonym=ECK1169;gene_synonym=JW5180;codon_start=1;transl_table=11;product=UPF0153 family cysteine cluster protein;protein_id=AAC74265.3;db_xref=GI:145693117;db_xref=ASAP:ABE-0003960;db_xref=UniProtKB/Swiss-Prot:P0A8L5;db_xref=EcoGene:EG13895 EMBL gene 1229483 1230394 . - . ID=.2566;gene=hlyE;locus_tag=b1182;gene_synonym=clyA;gene_synonym=ECK1170;gene_synonym=hpr;gene_synonym=JW5181;gene_synonym=sheA;gene_synonym=ycgD;db_xref=EcoGene:EG13243 EMBL CDS 1229483 1230394 . - 0 ID=.2567;gene=hlyE;locus_tag=b1182;gene_synonym=clyA;gene_synonym=ECK1170;gene_synonym=hpr;gene_synonym=JW5181;gene_synonym=sheA;gene_synonym=ycgD;function=phenotype%3B Not classified;note=GO_component: GO:0005576 - extracellular region;codon_start=1;transl_table=11;product=hemolysin E;protein_id=AAC74266.2;db_xref=GI:87081853;db_xref=ASAP:ABE-0003962;db_xref=UniProtKB/Swiss-Prot:P77335;db_xref=EcoGene:EG13243 EMBL gene 1230767 1231186 . + . ID=.2568;gene=umuD;locus_tag=b1183;gene_synonym=ECK1171;gene_synonym=JW1172;db_xref=EcoGene:EG11057 EMBL CDS 1230767 1231186 . + 0 ID=.2569;gene=umuD;locus_tag=b1183;gene_synonym=ECK1171;gene_synonym=JW1172;ec_number=3.4.21.-;function=putative enzyme%3B DNA - replication%2C repair%2C restriction/modification;note=SOS mutagenesis%3B error-prone repair%3B processed to UmuD'%3B forms complex with UmuC%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006261 - DNA-dependent DNA replication%3B GO_process: GO:0006281 - DNA repair%3B GO_process: GO:0006350 - transcription%3B GO_process: GO:0009432 - SOS response;codon_start=1;transl_table=11;product=translesion error-prone DNA polymerase V subunit%3B RecA-activated auto-protease;protein_id=AAC74267.1;db_xref=GI:1787431;db_xref=ASAP:ABE-0003974;db_xref=UniProtKB/Swiss-Prot:P0AG11;db_xref=EcoGene:EG11057 EMBL gene 1231186 1232454 . + . ID=.2570;gene=umuC;locus_tag=b1184;gene_synonym=ECK1172;gene_synonym=JW1173;gene_synonym=uvm;db_xref=EcoGene:EG11056 EMBL CDS 1231186 1232454 . + 0 ID=.2571;gene=umuC;locus_tag=b1184;gene_synonym=ECK1172;gene_synonym=JW1173;gene_synonym=uvm;function=putative enzyme%3B DNA - replication%2C repair%2C restriction/modification;note=SOS mutagenesis and repair%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006261 - DNA-dependent DNA replication%3B GO_process: GO:0006281 - DNA repair%3B GO_process: GO:0009432 - SOS response;codon_start=1;transl_table=11;product=translesion error-prone DNA polymerase V subunit%3B DNA polymerase activity;protein_id=AAC74268.1;db_xref=GI:1787432;db_xref=ASAP:ABE-0003977;db_xref=UniProtKB/Swiss-Prot:P04152;db_xref=EcoGene:EG11056 EMBL gene 1232500 1233030 . - . ID=.2572;gene=dsbB;locus_tag=b1185;gene_synonym=dsbX;gene_synonym=ECK1173;gene_synonym=iarB;gene_synonym=JW5182;gene_synonym=roxB;gene_synonym=ycgA;db_xref=EcoGene:EG11393 EMBL CDS 1232500 1233030 . - 0 ID=.2573;gene=dsbB;locus_tag=b1185;gene_synonym=dsbX;gene_synonym=ECK1173;gene_synonym=iarB;gene_synonym=JW5182;gene_synonym=roxB;gene_synonym=ycgA;function=enzyme%3B Surface structures;note=reoxidizes DsbA protein following formation of disulfide bond in P-ring of flagella%3B GO_component: GO:0019861 - flagellum%3B GO_component: GO:0009289 - pilus%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009296 - flagellum assembly%3B GO_process: GO:0006457 - protein folding%3B GO_process: GO:0042330 - taxis;codon_start=1;transl_table=11;product=oxidoreductase that catalyzes reoxidation of DsbA protein disulfide isomerase I;protein_id=AAC74269.1;db_xref=GI:1787433;db_xref=ASAP:ABE-0003979;db_xref=UniProtKB/Swiss-Prot:P0A6M2;db_xref=EcoGene:EG11393 EMBL gene 1233176 1234717 . - . ID=.2574;gene=nhaB;locus_tag=b1186;gene_synonym=ECK1174;gene_synonym=JW1175;db_xref=EcoGene:EG11392 EMBL CDS 1233176 1234717 . - 0 ID=.2575;gene=nhaB;locus_tag=b1186;gene_synonym=ECK1174;gene_synonym=JW1175;function=transport%3B Transport of small molecules: Cations;note=Na+/H+ antiporter%2C pH independent%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009268 - response to pH;codon_start=1;transl_table=11;product=sodium:proton antiporter;protein_id=AAC74270.1;db_xref=GI:1787435;db_xref=ASAP:ABE-0003984;db_xref=UniProtKB/Swiss-Prot:P0AFA7;db_xref=EcoGene:EG11392 EMBL gene 1234938 1235657 . + . ID=.2576;gene=fadR;locus_tag=b1187;gene_synonym=dec;gene_synonym=ECK1175;gene_synonym=JW1176;gene_synonym=ole;gene_synonym=oleR;gene_synonym=thdB;db_xref=EcoGene:EG10281 EMBL CDS 1234938 1235657 . + 0 ID=.2577;gene=fadR;locus_tag=b1187;gene_synonym=dec;gene_synonym=ECK1175;gene_synonym=JW1176;gene_synonym=ole;gene_synonym=oleR;gene_synonym=thdB;function=regulator%3B Degradation of small molecules: Fatty acids;note=negative regulator for fad regulon%2C and positive activator of fabA%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0019395 - fatty acid oxidation%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=fatty acid metabolism regulon transcriptional regulator;protein_id=AAC74271.1;db_xref=GI:1787436;db_xref=ASAP:ABE-0003988;db_xref=UniProtKB/Swiss-Prot:P0A8V6;db_xref=EcoGene:EG10281 EMBL gene 1235709 1237241 . - . ID=.2578;gene=ycgB;locus_tag=b1188;gene_synonym=ECK1176;gene_synonym=JW1177;db_xref=EcoGene:EG11516 EMBL CDS 1235709 1237241 . - 0 ID=.2579;gene=ycgB;locus_tag=b1188;gene_synonym=ECK1176;gene_synonym=JW1177;codon_start=1;transl_table=11;product=SpoVR family stationary phase protein;protein_id=AAC74272.1;db_xref=GI:1787437;db_xref=ASAP:ABE-0003990;db_xref=UniProtKB/Swiss-Prot:P29013;db_xref=EcoGene:EG11516 EMBL gene 1237571 1238869 . + . ID=.2580;gene=dadA;locus_tag=b1189;gene_synonym=dadR;gene_synonym=ECK1177;gene_synonym=JW1178;db_xref=EcoGene:EG11407 EMBL CDS 1237571 1238869 . + 0 ID=.2581;gene=dadA;locus_tag=b1189;gene_synonym=dadR;gene_synonym=ECK1177;gene_synonym=JW1178;ec_number=1.4.99.1;function=enzyme%3B Degradation of small molecules: Amino acids;note=D-amino acid dehydrogenase subunit%3B GO_process: GO:0009063 - cellular amino acid catabolic process;codon_start=1;transl_table=11;product=D-amino acid dehydrogenase;protein_id=AAC74273.1;db_xref=GI:1787438;db_xref=ASAP:ABE-0003995;db_xref=UniProtKB/Swiss-Prot:P0A6J5;db_xref=EcoGene:EG11407 EMBL gene 1238879 1239949 . + . ID=.2582;gene=dadX;locus_tag=b1190;gene_synonym=alnB;gene_synonym=dadB;gene_synonym=ECK1178;gene_synonym=JW1179;gene_synonym=msuA?;db_xref=EcoGene:EG11408 EMBL CDS 1238879 1239949 . + 0 ID=.2583;gene=dadX;locus_tag=b1190;gene_synonym=alnB;gene_synonym=dadB;gene_synonym=ECK1178;gene_synonym=JW1179;gene_synonym=msuA?;ec_number=5.1.1.1;function=enzyme%3B Degradation of small molecules: Amino acids;note=alanine racemase 2%2C catabolic%3B GO_process: GO:0009063 - cellular amino acid catabolic process%3B GO_process: GO:0006523 - alanine biosynthetic process;codon_start=1;transl_table=11;product=alanine racemase%2C catabolic%2C PLP-binding;protein_id=AAC74274.1;db_xref=GI:1787439;db_xref=ASAP:ABE-0003997;db_xref=UniProtKB/Swiss-Prot:P29012;db_xref=EcoGene:EG11408 EMBL gene 1240335 1242071 . - . ID=.2584;gene=cvrA;locus_tag=b1191;gene_synonym=ECK1179;gene_synonym=JW5184;gene_synonym=ycgO;db_xref=EcoGene:EG13896 EMBL CDS 1240335 1242071 . - 0 ID=.2585;gene=cvrA;locus_tag=b1191;gene_synonym=ECK1179;gene_synonym=JW5184;gene_synonym=ycgO;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative cation/proton antiporter;protein_id=AAC74275.2;db_xref=GI:87081854;db_xref=ASAP:ABE-0003999;db_xref=UniProtKB/Swiss-Prot:P76007;db_xref=EcoGene:EG13896 EMBL gene 1242166 1243080 . - . ID=.2586;gene=ldcA;locus_tag=b1192;gene_synonym=ECK1180;gene_synonym=JW1181;gene_synonym=ycgQ;db_xref=EcoGene:EG13898 EMBL CDS 1242166 1243080 . - 0 ID=.2587;gene=ldcA;locus_tag=b1192;gene_synonym=ECK1180;gene_synonym=JW1181;gene_synonym=ycgQ;ec_number=3.4.17.13;function=enzyme%3B Murein sacculus%2C peptidoglycan;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0000270 - peptidoglycan metabolic process;codon_start=1;transl_table=11;product=murein tetrapeptide carboxypeptidase%3B LD-carboxypeptidase A;protein_id=AAC74276.1;db_xref=GI:1787441;db_xref=ASAP:ABE-0004002;db_xref=UniProtKB/Swiss-Prot:P76008;db_xref=EcoGene:EG13898 EMBL gene 1243180 1243791 . + . ID=.2588;gene=emtA;locus_tag=b1193;gene_synonym=ECK1181;gene_synonym=JW5821;gene_synonym=mltE;gene_synonym=sltZ;gene_synonym=ycgP;db_xref=EcoGene:EG13897 EMBL CDS 1243180 1243791 . + 0 ID=.2589;gene=emtA;locus_tag=b1193;gene_synonym=ECK1181;gene_synonym=JW5821;gene_synonym=mltE;gene_synonym=sltZ;gene_synonym=ycgP;ec_number=3.2.1.-;function=enzyme%3B Murein sacculus%2C peptidoglycan;note=murein transglycosylase E%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009252 - peptidoglycan biosynthetic process;codon_start=1;transl_table=11;product=lytic murein endotransglycosylase E;protein_id=AAC74277.2;db_xref=GI:87081855;db_xref=ASAP:ABE-0004006;db_xref=UniProtKB/Swiss-Prot:P0C960;db_xref=EcoGene:EG13897 EMBL gene 1243793 1244527 . - . ID=.2590;gene=ycgR;locus_tag=b1194;gene_synonym=ECK1182;gene_synonym=JW1183;db_xref=EcoGene:EG13899 EMBL CDS 1243793 1244527 . - 0 ID=.2591;gene=ycgR;locus_tag=b1194;gene_synonym=ECK1182;gene_synonym=JW1183;note=GO_process: GO:0006355 - regulation of transcription%2C DNA-dependent;codon_start=1;transl_table=11;product=flagellar velocity braking protein%2C c-di-GMP-regulated;protein_id=AAC74278.1;db_xref=GI:1787443;db_xref=ASAP:ABE-0004009;db_xref=UniProtKB/Swiss-Prot:P76010;db_xref=EcoGene:EG13899 EMBL gene 1244728 1244982 . + . ID=.2592;gene=ymgE;locus_tag=b1195;gene_synonym=ECK1183;gene_synonym=JW1184;gene_synonym=tag;db_xref=EcoGene:EG14338 EMBL CDS 1244728 1244982 . + 0 ID=.2593;gene=ymgE;locus_tag=b1195;gene_synonym=ECK1183;gene_synonym=JW1184;gene_synonym=tag;note=transglycosylase asociated protein;codon_start=1;transl_table=11;product=UPF0410 family putative inner membrane protein;protein_id=AAC74279.1;db_xref=GI:1787445;db_xref=ASAP:ABE-0004014;db_xref=UniProtKB/Swiss-Prot:P76011;db_xref=EcoGene:EG14338 EMBL gene 1245160 1245600 . + . ID=.2594;gene=ycgY;locus_tag=b1196;gene_synonym=ECK1184;gene_synonym=JW1185;db_xref=EcoGene:EG14275 EMBL CDS 1245160 1245600 . + 0 ID=.2595;gene=ycgY;locus_tag=b1196;gene_synonym=ECK1184;gene_synonym=JW1185;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC74280.1;db_xref=GI:1787446;db_xref=ASAP:ABE-0004019;db_xref=UniProtKB/Swiss-Prot:P76012;db_xref=EcoGene:EG14275 EMBL gene 1245679 1247376 . - . ID=.2596;gene=treA;locus_tag=b1197;gene_synonym=ECK1185;gene_synonym=JW1186;gene_synonym=osmA;db_xref=EcoGene:EG11017 EMBL CDS 1245679 1247376 . - 0 ID=.2597;gene=treA;locus_tag=b1197;gene_synonym=ECK1185;gene_synonym=JW1186;gene_synonym=osmA;ec_number=3.2.1.28;function=enzyme%3B Osmotic adaptation;note=trehalase%2C periplasmic%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0006006 - glucose metabolic process%3B GO_process: GO:0006970 - response to osmotic stress;codon_start=1;transl_table=11;product=periplasmic trehalase;protein_id=AAC74281.1;db_xref=GI:1787447;db_xref=ASAP:ABE-0004021;db_xref=UniProtKB/Swiss-Prot:P13482;db_xref=EcoGene:EG11017 EMBL repeat_region 1247658 1247688 . + . ID=.2598;note=REP107 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 1247696 1249114 . - . ID=.2599;gene=dhaM;locus_tag=b1198;gene_synonym=dhaH;gene_synonym=ECK1186;gene_synonym=JW5185;gene_synonym=ptsD;gene_synonym=ycgC;db_xref=EcoGene:EG12399 EMBL CDS 1247696 1249114 . - 0 ID=.2600;gene=dhaM;locus_tag=b1198;gene_synonym=dhaH;gene_synonym=ECK1186;gene_synonym=JW5185;gene_synonym=ptsD;gene_synonym=ycgC;note=PTS hybrid protein;codon_start=1;transl_table=11;product=putative dihydroxyacetone-specific PTS enzymes: HPr%2C EI components;protein_id=AAC74282.4;db_xref=GI:226510935;db_xref=ASAP:ABE-0004024;db_xref=UniProtKB/Swiss-Prot:P37349;db_xref=EcoGene:EG12399 EMBL gene 1249125 1249757 . - . ID=.2601;gene=dhaL;locus_tag=b1199;gene_synonym=dhaK2;gene_synonym=ECK1187;gene_synonym=JW5186;gene_synonym=ptsD;gene_synonym=ycgS;db_xref=EcoGene:EG13900 EMBL CDS 1249125 1249757 . - 0 ID=.2602;gene=dhaL;locus_tag=b1199;gene_synonym=dhaK2;gene_synonym=ECK1187;gene_synonym=JW5186;gene_synonym=ptsD;gene_synonym=ycgS;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=dihydroxyacetone kinase%2C C-terminal domain;protein_id=AAC74283.1;db_xref=GI:1787449;db_xref=ASAP:ABE-0004026;db_xref=UniProtKB/Swiss-Prot:P76014;db_xref=EcoGene:EG13900 EMBL gene 1249768 1250838 . - . ID=.2603;gene=dhaK;locus_tag=b1200;gene_synonym=dhaK1;gene_synonym=ECK1188;gene_synonym=JW5187;gene_synonym=ptsD;gene_synonym=ycgT;db_xref=EcoGene:EG13901 EMBL CDS 1249768 1250838 . - 0 ID=.2604;gene=dhaK;locus_tag=b1200;gene_synonym=dhaK1;gene_synonym=ECK1188;gene_synonym=JW5187;gene_synonym=ptsD;gene_synonym=ycgT;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=dihydroxyacetone kinase%2C PTS-dependent%2C dihydroxyacetone-binding subunit;protein_id=AAC74284.2;db_xref=GI:87081857;db_xref=ASAP:ABE-0004029;db_xref=UniProtKB/Swiss-Prot:P76015;db_xref=EcoGene:EG13901 EMBL gene 1251066 1252985 . + . ID=.2605;gene=dhaR;locus_tag=b1201;gene_synonym=ECK1189;gene_synonym=JW5188;gene_synonym=ptsD;gene_synonym=ycgU;db_xref=EcoGene:EG13902 EMBL CDS 1251066 1252985 . + 0 ID=.2606;gene=dhaR;locus_tag=b1201;gene_synonym=ECK1189;gene_synonym=JW5188;gene_synonym=ptsD;gene_synonym=ycgU;function=putative regulator%3B Not classified;note=GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=dhaKLM operon transcription activator;protein_id=AAC74285.2;db_xref=GI:87081858;db_xref=ASAP:ABE-0004033;db_xref=UniProtKB/Swiss-Prot:P76016;db_xref=EcoGene:EG13902 EMBL gene 1253085 1255952 . - . ID=.2607;gene=ycgV;locus_tag=b1202;gene_synonym=ECK1190;gene_synonym=JW1193;db_xref=EcoGene:EG13903 EMBL CDS 1253085 1255952 . - 0 ID=.2608;gene=ycgV;locus_tag=b1202;gene_synonym=ECK1190;gene_synonym=JW1193;function=putative factor%3B Not classified;note=putative adhesion and penetration protein%3B GO_component: GO:0009279 - cell outer membrane;codon_start=1;transl_table=11;product=putative adhesin;protein_id=AAC74286.1;db_xref=GI:1787452;db_xref=ASAP:ABE-0004035;db_xref=UniProtKB/Swiss-Prot:P76017;db_xref=EcoGene:EG13903 EMBL gene 1256721 1257812 . - . ID=.2609;gene=ychF;locus_tag=b1203;gene_synonym=ECK1191;gene_synonym=engD;gene_synonym=gtp1;gene_synonym=JW1194;db_xref=EcoGene:EG11404 EMBL CDS 1256721 1257812 . - 0 ID=.2610;gene=ychF;locus_tag=b1203;gene_synonym=ECK1191;gene_synonym=engD;gene_synonym=gtp1;gene_synonym=JW1194;function=enzyme%3B Not classified;note=putative GTP-binding protein;codon_start=1;transl_table=11;product=catalase inhibitor protein%3B ATPase%2C K+-dependent%2C ribosome-associated;protein_id=AAC74287.1;db_xref=GI:1787454;db_xref=ASAP:ABE-0004038;db_xref=UniProtKB/Swiss-Prot:P0ABU2;db_xref=EcoGene:EG11404 EMBL gene 1257929 1258513 . - . ID=.2611;gene=pth;locus_tag=b1204;gene_synonym=asuA?;gene_synonym=ECK1192;gene_synonym=JW1195;gene_synonym=rap;db_xref=EcoGene:EG10785 EMBL CDS 1257929 1258513 . - 0 ID=.2612;gene=pth;locus_tag=b1204;gene_synonym=asuA?;gene_synonym=ECK1192;gene_synonym=JW1195;gene_synonym=rap;ec_number=3.1.1.29;function=enzyme%3B Aminoacyl tRNA synthetases%2C tRNA modification;experiment=N-terminus verified by Edman degradation: PMID 1833189;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006418 - tRNA aminoacylation for protein translation;codon_start=1;transl_table=11;product=peptidyl-tRNA hydrolase;protein_id=AAC74288.1;db_xref=GI:1787455;db_xref=ASAP:ABE-0004043;db_xref=UniProtKB/Swiss-Prot:P0A7D1;db_xref=EcoGene:EG10785 EMBL gene 1258791 1259069 . + . ID=.2613;gene=ychH;locus_tag=b1205;gene_synonym=ECK1193;gene_synonym=JW1196;db_xref=EcoGene:EG11533 EMBL CDS 1258791 1259069 . + 0 ID=.2614;gene=ychH;locus_tag=b1205;gene_synonym=ECK1193;gene_synonym=JW1196;codon_start=1;transl_table=11;product=DUF2583 family putative inner membrane protein;protein_id=AAC74289.1;db_xref=GI:1787456;db_xref=ASAP:ABE-0004049;db_xref=UniProtKB/Swiss-Prot:P0AB49;db_xref=EcoGene:EG11533 EMBL gene 1259124 1260803 . - . ID=.2615;gene=dauA;locus_tag=b1206;gene_synonym=ECK1194;gene_synonym=JW5189;gene_synonym=ychM;db_xref=EcoGene:EG12392 EMBL CDS 1259124 1260803 . - 0 ID=.2616;gene=dauA;locus_tag=b1206;gene_synonym=ECK1194;gene_synonym=JW5189;gene_synonym=ychM;note=putative sulfate transporter%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=C4-dicarboxylic acid transporter;protein_id=AAC74290.2;db_xref=GI:87081859;db_xref=ASAP:ABE-0004051;db_xref=UniProtKB/Swiss-Prot:P0AFR2;db_xref=EcoGene:EG12392 EMBL gene 1260928 1261875 . - . ID=.2617;gene=prs;locus_tag=b1207;gene_synonym=dnaR;gene_synonym=ECK1195;gene_synonym=JW1198;gene_synonym=prsA;db_xref=EcoGene:EG10774 EMBL CDS 1260928 1261875 . - 0 ID=.2618;gene=prs;locus_tag=b1207;gene_synonym=dnaR;gene_synonym=ECK1195;gene_synonym=JW1198;gene_synonym=prsA;ec_number=2.7.6.1;function=enzyme%3B Purine ribonucleotide biosynthesis;note=phosphoribosylpyrophosphate synthetase%3B GO_process: GO:0009152 - purine ribonucleotide biosynthetic process;codon_start=1;transl_table=11;product=phosphoribosylpyrophosphate synthase;protein_id=AAC74291.1;db_xref=GI:1787458;db_xref=ASAP:ABE-0004054;db_xref=UniProtKB/Swiss-Prot:P0A717;db_xref=EcoGene:EG10774 EMBL gene 1262026 1262877 . - . ID=.2619;gene=ispE;locus_tag=b1208;gene_synonym=ECK1196;gene_synonym=ipk;gene_synonym=JW1199;gene_synonym=ychB;db_xref=EcoGene:EG11294 EMBL CDS 1262026 1262877 . - 0 ID=.2620;gene=ispE;locus_tag=b1208;gene_synonym=ECK1196;gene_synonym=ipk;gene_synonym=JW1199;gene_synonym=ychB;ec_number=2.7.1.148;note=GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=4-diphosphocytidyl-2-C-methylerythritol kinase;protein_id=AAC74292.1;db_xref=GI:1787459;db_xref=ASAP:ABE-0004056;db_xref=UniProtKB/Swiss-Prot:P62615;db_xref=EcoGene:EG11294 EMBL gene 1262877 1263500 . - . ID=.2621;gene=lolB;locus_tag=b1209;gene_synonym=ECK1197;gene_synonym=hemM;gene_synonym=JW1200;gene_synonym=ychC;db_xref=EcoGene:EG11293 EMBL CDS 1262877 1263500 . - 0 ID=.2622;gene=lolB;locus_tag=b1209;gene_synonym=ECK1197;gene_synonym=hemM;gene_synonym=JW1200;gene_synonym=ychC;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Heme%2C porphyrin;note=outer-membrane lipoprotein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane;codon_start=1;transl_table=11;product=lipoprotein localization factor;protein_id=AAC74293.1;db_xref=GI:1787460;db_xref=ASAP:ABE-0004059;db_xref=UniProtKB/Swiss-Prot:P61320;db_xref=EcoGene:EG11293 EMBL gene 1263714 1264970 . + . ID=.2623;gene=hemA;locus_tag=b1210;gene_synonym=ECK1198;gene_synonym=gtrA;gene_synonym=JW1201;db_xref=EcoGene:EG10427 EMBL CDS 1263714 1264970 . + 0 ID=.2624;gene=hemA;locus_tag=b1210;gene_synonym=ECK1198;gene_synonym=gtrA;gene_synonym=JW1201;ec_number=1.2.1.-;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Heme%2C porphyrin;note=glutamyl-tRNA reductase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=glutamyl tRNA reductase;protein_id=AAC74294.1;db_xref=GI:1787461;db_xref=ASAP:ABE-0004064;db_xref=UniProtKB/Swiss-Prot:P0A6X1;db_xref=EcoGene:EG10427 EMBL gene 1265012 1266094 . + . ID=.2625;gene=prfA;locus_tag=b1211;gene_synonym=ECK1199;gene_synonym=JW1202;gene_synonym=sueB;gene_synonym=uar;gene_synonym=ups?;db_xref=EcoGene:EG10761 EMBL CDS 1265012 1266094 . + 0 ID=.2626;gene=prfA;locus_tag=b1211;gene_synonym=ECK1199;gene_synonym=JW1202;gene_synonym=sueB;gene_synonym=uar;gene_synonym=ups?;function=factor%3B Proteins - translation and modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=peptide chain release factor RF-1;protein_id=AAC74295.1;db_xref=GI:1787462;db_xref=ASAP:ABE-0004066;db_xref=UniProtKB/Swiss-Prot:P0A7I0;db_xref=EcoGene:EG10761 EMBL gene 1266094 1266927 . + . ID=.2627;gene=prmC;locus_tag=b1212;gene_synonym=ECK1200;gene_synonym=hemK;gene_synonym=JW1203;db_xref=EcoGene:EG12424 EMBL CDS 1266094 1266927 . + 0 ID=.2628;gene=prmC;locus_tag=b1212;gene_synonym=ECK1200;gene_synonym=hemK;gene_synonym=JW1203;ec_number=2.1.1.-;function=putative enzyme%3B Biosynthesis of cofactors%2C carriers: Heme%2C porphyrin;note=possible protoporphyrinogen oxidase;codon_start=1;transl_table=11;product=RF-1 and RF-2 N5-glutamine methyltransferase;protein_id=AAC74296.1;db_xref=GI:1787463;db_xref=ASAP:ABE-0004068;db_xref=UniProtKB/Swiss-Prot:P0ACC1;db_xref=EcoGene:EG12424 EMBL gene 1266924 1267316 . + . ID=.2629;gene=ychQ;locus_tag=b1213;gene_synonym=ECK1201;gene_synonym=JW1204;gene_synonym=sirB2;db_xref=EcoGene:EG14293 EMBL CDS 1266924 1267316 . + 0 ID=.2630;gene=ychQ;locus_tag=b1213;gene_synonym=ECK1201;gene_synonym=JW1204;gene_synonym=sirB2;note=GO_process: GO:0006355 - regulation of transcription%2C DNA-dependent;codon_start=1;transl_table=11;product=SIRB family inner membrane protein;protein_id=AAC74297.1;db_xref=GI:1787464;db_xref=ASAP:ABE-0004071;db_xref=UniProtKB/Swiss-Prot:Q46755;db_xref=EcoGene:EG14293 EMBL gene 1267320 1268129 . + . ID=.2631;gene=ychA;locus_tag=b1214;gene_synonym=ECK1202;gene_synonym=JW1205;gene_synonym=sirB1;db_xref=EcoGene:EG11251 EMBL CDS 1267320 1268129 . + 0 ID=.2632;gene=ychA;locus_tag=b1214;gene_synonym=ECK1202;gene_synonym=JW1205;gene_synonym=sirB1;function=putative enzyme%3B Not classified;note=GO_process: GO:0006355 - regulation of transcription%2C DNA-dependent;codon_start=1;transl_table=11;product=transglutaminase-like TPR-repeat protein;protein_id=AAC74298.1;db_xref=GI:1787465;db_xref=ASAP:ABE-0004074;db_xref=UniProtKB/Swiss-Prot:P0AGM5;db_xref=EcoGene:EG11251 EMBL gene 1268165 1269019 . + . ID=.2633;gene=kdsA;locus_tag=b1215;gene_synonym=ECK1203;gene_synonym=JW1206;db_xref=EcoGene:EG10518 EMBL CDS 1268165 1269019 . + 0 ID=.2634;gene=kdsA;locus_tag=b1215;gene_synonym=ECK1203;gene_synonym=JW1206;ec_number=2.5.1.55;function=enzyme%3B Surface polysaccharides %26 antigens;experiment=N-terminus verified by Edman degradation: PMID 7775423%2C9298646;note=2-dehydro-3-deoxyphosphooctulonate aldolase%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0009244 - lipopolysaccharide core region biosynthetic process%3B GO_process: GO:0009248 - K antigen biosynthetic process;codon_start=1;transl_table=11;product=3-deoxy-D-manno-octulosonate 8-phosphate synthase;protein_id=AAC74299.1;db_xref=GI:1787466;db_xref=ASAP:ABE-0004077;db_xref=UniProtKB/Swiss-Prot:P0A715;db_xref=EcoGene:EG10518 EMBL gene 1269168 1269275 . - . ID=.2635;gene=ldrA;locus_tag=b4419;gene_synonym=ECK1204;gene_synonym=JW5957;db_xref=EcoGene:EG14403 EMBL CDS 1269168 1269275 . - 0 ID=.2636;gene=ldrA;locus_tag=b4419;gene_synonym=ECK1204;gene_synonym=JW5957;note=small toxic polypeptide;codon_start=1;transl_table=11;product=toxic polypeptide%2C small;protein_id=AAT48126.1;db_xref=GI:48994880;db_xref=ASAP:ABE-0047280;db_xref=UniProtKB/Swiss-Prot:Q6BF86;db_xref=EcoGene:EG14403 EMBL gene 1269323 1269389 . + . ID=.2637;gene=rdlA;locus_tag=b4420;gene_synonym=ECK1205;gene_synonym=JWR0229;db_xref=EcoGene:EG31139 EMBL ncRNA 1269323 1269389 . + . ID=.2638;ncrna_class=antisense_RNA;gene=rdlA;locus_tag=b4420;gene_synonym=ECK1205;gene_synonym=JWR0229;product=sRNA antisense regulator affects LdrA translation%3B proposed addiction module in LDR-A repeat%2C with toxic peptide LdrA;note=antisense RNA%2C trans-acting regulator of ldrA translation;function=component of addiction module;db_xref=ASAP:ABE-0047243;db_xref=EcoGene:EG31139 EMBL gene 1269703 1269810 . - . ID=.2639;gene=ldrB;locus_tag=b4421;gene_synonym=ECK1206;gene_synonym=JW5958;db_xref=EcoGene:EG14404 EMBL CDS 1269703 1269810 . - 0 ID=.2640;gene=ldrB;locus_tag=b4421;gene_synonym=ECK1206;gene_synonym=JW5958;note=small toxic polypeptide;codon_start=1;transl_table=11;product=toxic polypeptide%2C small;protein_id=AAT48127.1;db_xref=GI:48994881;db_xref=ASAP:ABE-0047281;db_xref=UniProtKB/Swiss-Prot:Q6BF87;db_xref=EcoGene:EG14404 EMBL gene 1269858 1269923 . + . ID=.2641;gene=rdlB;locus_tag=b4422;gene_synonym=ECK1207;gene_synonym=JWR0230;db_xref=EcoGene:EG31140 EMBL ncRNA 1269858 1269923 . + . ID=.2642;ncrna_class=antisense_RNA;gene=rdlB;locus_tag=b4422;gene_synonym=ECK1207;gene_synonym=JWR0230;product=sRNA antisense regulator affects LdrB translation%3B proposed addiction module in LDR-B repeat%2C with toxic peptide LdrB;note=antisense RNA%2C trans-acting regulator of ldrB translation;function=component of addiction module;db_xref=ASAP:ABE-0047244;db_xref=EcoGene:EG31140 EMBL gene 1270238 1270345 . - . ID=.2643;gene=ldrC;locus_tag=b4423;gene_synonym=ECK1208;gene_synonym=JW5959;db_xref=EcoGene:EG14405 EMBL CDS 1270238 1270345 . - 0 ID=.2644;gene=ldrC;locus_tag=b4423;gene_synonym=ECK1208;gene_synonym=JW5959;note=small toxic polypeptide;codon_start=1;transl_table=11;product=toxic polypeptide%2C small;protein_id=AAT48128.1;db_xref=GI:48994882;db_xref=ASAP:ABE-0047282;db_xref=UniProtKB/Swiss-Prot:Q6BF86;db_xref=EcoGene:EG14405 EMBL gene 1270393 1270460 . + . ID=.2645;gene=rdlC;locus_tag=b4424;gene_synonym=ECK1209;gene_synonym=JWR0231;db_xref=EcoGene:EG31141 EMBL ncRNA 1270393 1270460 . + . ID=.2646;ncrna_class=antisense_RNA;gene=rdlC;locus_tag=b4424;gene_synonym=ECK1209;gene_synonym=JWR0231;product=sRNA antisense regulator affects LdrC translation%3B proposed addiction module in LDR-C repeat%2C with toxic peptide LdrC;note=antisense RNA%2C trans-acting regulator of ldrC translation;function=component of addiction module;db_xref=ASAP:ABE-0047245;db_xref=EcoGene:EG31141 EMBL gene 1270749 1271849 . - . ID=.2647;gene=chaA;locus_tag=b1216;gene_synonym=ECK1210;gene_synonym=JW1207;db_xref=EcoGene:EG11753 EMBL CDS 1270749 1271849 . - 0 ID=.2648;gene=chaA;locus_tag=b1216;gene_synonym=ECK1210;gene_synonym=JW1207;function=transport%3B Transport of small molecules: Cations;note=sodium-calcium/proton antiporter%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=calcium/sodium:proton antiporter;protein_id=AAC74300.1;db_xref=GI:1787468;db_xref=ASAP:ABE-0004082;db_xref=UniProtKB/Swiss-Prot:P31801;db_xref=EcoGene:EG11753 EMBL gene 1272119 1272349 . + . ID=.2649;gene=chaB;locus_tag=b1217;gene_synonym=ECK1211;gene_synonym=JW1208;db_xref=EcoGene:EG12402 EMBL CDS 1272119 1272349 . + 0 ID=.2650;gene=chaB;locus_tag=b1217;gene_synonym=ECK1211;gene_synonym=JW1208;function=regulator%3B Transport of small molecules: Cations;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=cation transport regulator;protein_id=AAC74301.1;db_xref=GI:1787469;db_xref=ASAP:ABE-0004087;db_xref=UniProtKB/Swiss-Prot:P0AE63;db_xref=EcoGene:EG12402 EMBL gene 1272507 1273202 . + . ID=.2651;gene=chaC;locus_tag=b1218;gene_synonym=ECK1212;gene_synonym=JW1209;db_xref=EcoGene:EG12403 EMBL CDS 1272507 1273202 . + 0 ID=.2652;gene=chaC;locus_tag=b1218;gene_synonym=ECK1212;gene_synonym=JW1209;function=transport%3B Transport of small molecules: Cations;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=cation transport regulator;protein_id=AAC74302.2;db_xref=GI:145693119;db_xref=ASAP:ABE-0004089;db_xref=UniProtKB/Swiss-Prot:P39163;db_xref=EcoGene:EG12403 EMBL gene 1273246 1273599 . - . ID=.2653;gene=ychN;locus_tag=b1219;gene_synonym=ECK1213;gene_synonym=JW1210;db_xref=EcoGene:EG12404 EMBL CDS 1273246 1273599 . - 0 ID=.2654;gene=ychN;locus_tag=b1219;gene_synonym=ECK1213;gene_synonym=JW1210;codon_start=1;transl_table=11;product=putative sulfur relay protein;protein_id=AAC74303.1;db_xref=GI:1787471;db_xref=ASAP:ABE-0004091;db_xref=UniProtKB/Swiss-Prot:P0AB52;db_xref=EcoGene:EG12404 EMBL gene 1273784 1275178 . + . ID=.2655;gene=ychO;locus_tag=b1220;gene_synonym=ECK1214;gene_synonym=JW1211;gene_synonym=ychP;db_xref=EcoGene:EG12405 EMBL CDS 1273784 1275178 . + 0 ID=.2656;gene=ychO;locus_tag=b1220;gene_synonym=ECK1214;gene_synonym=JW1211;gene_synonym=ychP;function=putative factor%3B Not classified;note=conserved protein%2C invasin-like;codon_start=1;transl_table=11;product=putative invasin;protein_id=AAC74304.2;db_xref=GI:145693120;db_xref=ASAP:ABE-0004095;db_xref=UniProtKB/Swiss-Prot:P39165;db_xref=EcoGene:EG12405 EMBL gene 1275179 1275829 . - . ID=.2657;gene=narL;locus_tag=b1221;gene_synonym=ECK1215;gene_synonym=frdR;gene_synonym=JW1212;db_xref=EcoGene:EG10643 EMBL CDS 1275179 1275829 . - 0 ID=.2658;gene=narL;locus_tag=b1221;gene_synonym=ECK1215;gene_synonym=frdR;gene_synonym=JW1212;function=regulator%3B Energy metabolism%2C carbon: Anaerobic respiration;note=pleiotrophic regulation of anaerobic respiration: response regulator for nar%2C frd%2C dms and tor genes%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=response regulator in two-component regulatory system with NarX;protein_id=AAC74305.1;db_xref=GI:1787473;db_xref=ASAP:ABE-0004097;db_xref=UniProtKB/Swiss-Prot:P0AF28;db_xref=EcoGene:EG10643 EMBL gene 1275822 1277618 . - . ID=.2659;gene=narX;locus_tag=b1222;gene_synonym=ECK1216;gene_synonym=frdR;gene_synonym=JW1213;gene_synonym=narR;db_xref=EcoGene:EG10646 EMBL CDS 1275822 1277618 . - 0 ID=.2660;gene=narX;locus_tag=b1222;gene_synonym=ECK1216;gene_synonym=frdR;gene_synonym=JW1213;gene_synonym=narR;function=enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;note=nitrate/nitrate sensor%2C histidine protein kinase acts on NarL regulator%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=sensory histidine kinase in two-component regulatory system with NarL;protein_id=AAC74306.1;db_xref=GI:1787474;db_xref=ASAP:ABE-0004099;db_xref=UniProtKB/Swiss-Prot:P0AFA2;db_xref=EcoGene:EG10646 EMBL gene 1277957 1279348 . + . ID=.2661;gene=narK;locus_tag=b1223;gene_synonym=ECK1217;gene_synonym=JW1214;db_xref=EcoGene:EG10642 EMBL CDS 1277957 1279348 . + 0 ID=.2662;gene=narK;locus_tag=b1223;gene_synonym=ECK1217;gene_synonym=JW1214;function=transport%3B Transport of small molecules: Anions;note=nitrite extrusion protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006807 - nitrogen compound metabolic process;codon_start=1;transl_table=11;product=nitrate/nitrite transporter;protein_id=AAC74307.1;db_xref=GI:1787475;db_xref=ASAP:ABE-0004111;db_xref=UniProtKB/Swiss-Prot:P10903;db_xref=EcoGene:EG10642 EMBL gene 1279864 1283607 . + . ID=.2663;gene=narG;locus_tag=b1224;gene_synonym=chlC;gene_synonym=ECK1218;gene_synonym=JW1215;gene_synonym=narC;db_xref=EcoGene:EG10638 EMBL CDS 1279864 1283607 . + 0 ID=.2664;gene=narG;locus_tag=b1224;gene_synonym=chlC;gene_synonym=ECK1218;gene_synonym=JW1215;gene_synonym=narC;ec_number=1.7.99.4;function=enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=nitrate reductase 1%2C alpha subunit;protein_id=AAC74308.1;db_xref=GI:1787477;db_xref=ASAP:ABE-0004119;db_xref=UniProtKB/Swiss-Prot:P09152;db_xref=EcoGene:EG10638 EMBL gene 1283604 1285142 . + . ID=.2665;gene=narH;locus_tag=b1225;gene_synonym=chlC;gene_synonym=ECK1219;gene_synonym=JW1216;db_xref=EcoGene:EG10639 EMBL CDS 1283604 1285142 . + 0 ID=.2666;gene=narH;locus_tag=b1225;gene_synonym=chlC;gene_synonym=ECK1219;gene_synonym=JW1216;ec_number=1.7.99.4;function=enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;experiment=N-terminus verified by Edman degradation: PMID 3053688;note=nitrate reductase 1%2C beta subunit%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=nitrate reductase 1%2C beta (Fe-S) subunit;protein_id=AAC74309.1;db_xref=GI:1787478;db_xref=ASAP:ABE-0004121;db_xref=UniProtKB/Swiss-Prot:P11349;db_xref=EcoGene:EG10639 EMBL gene 1285139 1285849 . + . ID=.2667;gene=narJ;locus_tag=b1226;gene_synonym=ECK1220;gene_synonym=JW1217;db_xref=EcoGene:EG10641 EMBL CDS 1285139 1285849 . + 0 ID=.2668;gene=narJ;locus_tag=b1226;gene_synonym=ECK1220;gene_synonym=JW1217;ec_number=1.7.99.4;function=enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;experiment=N-terminus verified by Edman degradation: PMID 2832376;note=nitrate reductase 1%2C delta subunit%2C assembly function%3B GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=molybdenum-cofactor-assembly chaperone delta subunit of nitrate reductase 1;protein_id=AAC74310.1;db_xref=GI:1787479;db_xref=ASAP:ABE-0004123;db_xref=UniProtKB/Swiss-Prot:P0AF26;db_xref=EcoGene:EG10641 EMBL gene 1285849 1286526 . + . ID=.2669;gene=narI;locus_tag=b1227;gene_synonym=chlI;gene_synonym=ECK1221;gene_synonym=JW1218;db_xref=EcoGene:EG10640 EMBL CDS 1285849 1286526 . + 0 ID=.2670;gene=narI;locus_tag=b1227;gene_synonym=chlI;gene_synonym=ECK1221;gene_synonym=JW1218;ec_number=1.7.99.4;function=enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;experiment=N-terminus verified by Edman degradation: PMID 3053688;note=nitrate reductase 1%2C cytochrome b(NR)%2C gamma subunit%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0017004 - cytochrome complex assembly;codon_start=1;transl_table=11;product=nitrate reductase 1%2C gamma (cytochrome b(NR)) subunit;protein_id=AAC74311.1;db_xref=GI:1787480;db_xref=ASAP:ABE-0004125;db_xref=UniProtKB/Swiss-Prot:P11350;db_xref=EcoGene:EG10640 EMBL repeat_region 1286594 1286665 . + . ID=.2671;note=REP108 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 1287066 1287236 . - . ID=.2672;gene=rttR;locus_tag=b4425;gene_synonym=ECK1223;gene_synonym=JWR0232;gene_synonym=rtT;gene_synonym=rtV1;db_xref=EcoGene:EG31131 EMBL ncRNA 1287066 1287236 . - . ID=.2673;ncrna_class=other;gene=rttR;locus_tag=b4425;gene_synonym=ECK1223;gene_synonym=JWR0232;gene_synonym=rtT;gene_synonym=rtV1;product=rtT sRNA%2C processed from tyrT transcript;note=rtT RNA may modulate the stringent response%3B released from primary tyrT transcript during tRNA processing%3B encodes putative Tpr protein;db_xref=ASAP:ABE-0047246;db_xref=EcoGene:EG31131 EMBL gene 1287087 1287176 . - . ID=.2674;gene=tpr;locus_tag=b1229;gene_synonym=ECK1224;gene_synonym=JW1219;db_xref=EcoGene:EG11016 EMBL CDS 1287087 1287176 . - 0 ID=.2675;gene=tpr;locus_tag=b1229;gene_synonym=ECK1224;gene_synonym=JW1219;function=factor%3B Basic proteins - synthesis%2C modification;note=a protamine-like protein%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=protamine-like protein;protein_id=AAC74313.2;db_xref=GI:145693121;db_xref=ASAP:ABE-0004131;db_xref=UniProtKB/Swiss-Prot:P02338;db_xref=EcoGene:EG11016 EMBL gene 1287244 1287328 . - . ID=.2676;gene=tyrV;locus_tag=b1230;gene_synonym=ECK1225;gene_synonym=JWR0028;gene_synonym=tyrTbeta;db_xref=EcoGene:EG30108 EMBL tRNA 1287244 1287328 . - . ID=.2677;gene=tyrV;locus_tag=b1230;gene_synonym=ECK1225;gene_synonym=JWR0028;gene_synonym=tyrTbeta;product=tRNA-Tyr;note=anticodon: GUA;db_xref=ASAP:ABE-0004134;db_xref=EcoGene:EG30108 EMBL gene 1287538 1287622 . - . ID=.2678;gene=tyrT;locus_tag=b1231;gene_synonym=ECK1226;gene_synonym=JWR0029;gene_synonym=su;gene_synonym=Su-3;gene_synonym=Su-4;gene_synonym=suIII;gene_synonym=supC;gene_synonym=supFsupO;gene_synonym=tyrTalpha;db_xref=EcoGene:EG30106 EMBL tRNA 1287538 1287622 . - . ID=.2679;gene=tyrT;locus_tag=b1231;gene_synonym=ECK1226;gene_synonym=JWR0029;gene_synonym=su;gene_synonym=Su-3;gene_synonym=Su-4;gene_synonym=suIII;gene_synonym=supC;gene_synonym=supFsupO;gene_synonym=tyrTalpha;product=tRNA-Tyr;note=anticodon: GUA;db_xref=ASAP:ABE-0004136;db_xref=EcoGene:EG30106 EMBL gene 1287782 1288624 . - . ID=.2680;gene=purU;locus_tag=b1232;gene_synonym=ECK1227;gene_synonym=JW1220;gene_synonym=tgs;gene_synonym=ychI;db_xref=EcoGene:EG11819 EMBL CDS 1287782 1288624 . - 0 ID=.2681;gene=purU;locus_tag=b1232;gene_synonym=ECK1227;gene_synonym=JW1220;gene_synonym=tgs;gene_synonym=ychI;ec_number=3.5.1.10;function=enzyme%3B Purine ribonucleotide biosynthesis;experiment=N-terminus verified by Edman degradation: PMID 8226647;note=formyltetrahydrofolate deformylase%3B for purT-dependent FGAR synthesis%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009152 - purine ribonucleotide biosynthetic process;codon_start=1;transl_table=11;product=formyltetrahydrofolate hydrolase;protein_id=AAC74314.1;db_xref=GI:1787483;db_xref=ASAP:ABE-0004138;db_xref=UniProtKB/Swiss-Prot:P37051;db_xref=EcoGene:EG11819 EMBL gene 1288674 1289132 . - . ID=.2682;gene=ychJ;locus_tag=b1233;gene_synonym=ECK1228;gene_synonym=JW1221;db_xref=EcoGene:EG12119 EMBL CDS 1288674 1289132 . - 0 ID=.2683;gene=ychJ;locus_tag=b1233;gene_synonym=ECK1228;gene_synonym=JW1221;codon_start=1;transl_table=11;product=UPF0225 family protein;protein_id=AAC74315.1;db_xref=GI:1787484;db_xref=ASAP:ABE-0004140;db_xref=UniProtKB/Swiss-Prot:P37052;db_xref=EcoGene:EG12119 EMBL gene 1289245 1290150 . + . ID=.2684;gene=rssA;locus_tag=b1234;gene_synonym=ECK1229;gene_synonym=JW1222;gene_synonym=ychK;db_xref=EcoGene:EG12120 EMBL CDS 1289245 1290150 . + 0 ID=.2685;gene=rssA;locus_tag=b1234;gene_synonym=ECK1229;gene_synonym=JW1222;gene_synonym=ychK;note=GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=putative patatin-like family phospholipase;protein_id=AAC74316.2;db_xref=GI:226510936;db_xref=ASAP:ABE-0004144;db_xref=UniProtKB/Swiss-Prot:P0AFR0;db_xref=EcoGene:EG12120 EMBL gene 1290242 1291255 . + . ID=.2686;gene=rssB;locus_tag=b1235;gene_synonym=ECK1230;gene_synonym=hnr;gene_synonym=JW1223;gene_synonym=mviA;gene_synonym=sprE;gene_synonym=verA;gene_synonym=ychL;db_xref=EcoGene:EG12121 EMBL CDS 1290242 1291255 . + 0 ID=.2687;gene=rssB;locus_tag=b1235;gene_synonym=ECK1230;gene_synonym=hnr;gene_synonym=JW1223;gene_synonym=mviA;gene_synonym=sprE;gene_synonym=verA;gene_synonym=ychL;function=regulator%3B Basic proteins - synthesis%2C modification;note=Hnr protein%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=PcnB-degradosome interaction factor%3B response regulator;protein_id=AAC74317.1;db_xref=GI:1787487;db_xref=ASAP:ABE-0004147;db_xref=UniProtKB/Swiss-Prot:P0AEV1;db_xref=EcoGene:EG12121 EMBL gene 1291457 1292365 . + . ID=.2688;gene=galU;locus_tag=b1236;gene_synonym=ECK1231;gene_synonym=JW1224;gene_synonym=verA;gene_synonym=ychD;db_xref=EcoGene:EG11319 EMBL CDS 1291457 1292365 . + 0 ID=.2689;gene=galU;locus_tag=b1236;gene_synonym=ECK1231;gene_synonym=JW1224;gene_synonym=verA;gene_synonym=ychD;ec_number=2.7.7.9;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=GO_process: GO:0006012 - galactose metabolic process%3B GO_process: GO:0006006 - glucose metabolic process%3B GO_process: GO:0009242 - colanic acid biosynthetic process%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0009269 - response to desiccation;codon_start=1;transl_table=11;product=glucose-1-phosphate uridylyltransferase;protein_id=AAC74318.1;db_xref=GI:1787488;db_xref=ASAP:ABE-0004150;db_xref=UniProtKB/Swiss-Prot:P0AEP3;db_xref=EcoGene:EG11319 EMBL gene 1292509 1292922 . - . ID=.2690;gene=hns;locus_tag=b1237;gene_synonym=B1;gene_synonym=bglY;gene_synonym=cur;gene_synonym=drc;gene_synonym=drdX;gene_synonym=drs;gene_synonym=ECK1232;gene_synonym=fimG;gene_synonym=H1;gene_synonym=hnsA;gene_synonym=irk;gene_synonym=JW1225;gene_synonym=msyA;gene_synonym=osmZ;gene_synonym=pilG;gene_synonym=topS;gene_synonym=topX;gene_synonym=verA;gene_synonym=virR;db_xref=EcoGene:EG10457 EMBL CDS 1292509 1292922 . - 0 ID=.2691;gene=hns;locus_tag=b1237;gene_synonym=B1;gene_synonym=bglY;gene_synonym=cur;gene_synonym=drc;gene_synonym=drdX;gene_synonym=drs;gene_synonym=ECK1232;gene_synonym=fimG;gene_synonym=H1;gene_synonym=hnsA;gene_synonym=irk;gene_synonym=JW1225;gene_synonym=msyA;gene_synonym=osmZ;gene_synonym=pilG;gene_synonym=topS;gene_synonym=topX;gene_synonym=verA;gene_synonym=virR;function=regulator%3B Basic proteins - synthesis%2C modification;note=DNA-binding protein HLP-II (HU%2C BH2%2C HD%2C NS)%3B pleiotropic regulator%3B GO_component: GO:0019861 - flagellum%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006350 - transcription%3B GO_process: GO:0006355 - regulation of transcription%2C DNA-dependent%3B GO_process: GO:0042330 - taxis;codon_start=1;transl_table=11;product=global DNA-binding transcriptional dual regulator H-NS;protein_id=AAC74319.1;db_xref=GI:1787489;db_xref=ASAP:ABE-0004152;db_xref=UniProtKB/Swiss-Prot:P0ACF8;db_xref=EcoGene:EG10457 EMBL gene 1293527 1294144 . + . ID=.2692;gene=tdk;locus_tag=b1238;gene_synonym=ECK1233;gene_synonym=JW1226;db_xref=EcoGene:EG10994 EMBL CDS 1293527 1294144 . + 0 ID=.2693;gene=tdk;locus_tag=b1238;gene_synonym=ECK1233;gene_synonym=JW1226;ec_number=2.7.1.21;function=enzyme%3B Salvage of nucleosides and nucleotides;note=thymidine kinase%3B GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion;codon_start=1;transl_table=11;product=thymidine kinase/deoxyuridine kinase;protein_id=AAC74320.1;db_xref=GI:1787490;db_xref=ASAP:ABE-0004157;db_xref=UniProtKB/Swiss-Prot:P23331;db_xref=EcoGene:EG10994 EMBL sequence_feature 1294426 1295405 . - . ID=.2694;note=*mobile_element_type: insertion sequence:ISZ EMBL gene 1294426 1295322 . - . ID=.2695;gene=insZ;locus_tag=b4573;gene_synonym=ECK1234;gene_synonym=JW1227;gene_synonym=JW5883;gene_synonym=ychG;gene_synonym=ychR;pseudo=true;db_xref=EcoGene:EG11611 EMBL biological_region 1294426 1295322 . - 0 ID=.2696;featflags=type:CDS;gene=insZ;locus_tag=b4573;gene_synonym=ECK1234;gene_synonym=JW1227;gene_synonym=JW5883;gene_synonym=ychG;gene_synonym=ychR;note=pseudogene%2C transposase homolog;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0004159;db_xref=ASAP:ABE-0004161;db_xref=ASAP:ABE-0285106;db_xref=UniProtKB/Swiss-Prot:P30192;db_xref=EcoGene:EG11611 EMBL CDS 1294426 1294992 . - 0 Parent=.2696 EMBL CDS 1294992 1295141 . - 0 Parent=.2696 EMBL CDS 1295140 1295322 . - 0 Parent=.2696 EMBL gene 1295446 1298121 . - . ID=.2700;gene=adhE;locus_tag=b1241;gene_synonym=adhC;gene_synonym=ana;gene_synonym=ECK1235;gene_synonym=JW1228;db_xref=EcoGene:EG10031 EMBL CDS 1295446 1298121 . - 0 ID=.2701;gene=adhE;locus_tag=b1241;gene_synonym=adhC;gene_synonym=ana;gene_synonym=ECK1235;gene_synonym=JW1228;ec_number=1.1.1.1;ec_number=1.2.1.10;function=enzyme%3B Energy metabolism%2C carbon: Fermentation;note=CoA-linked acetaldehyde dehydrogenase and iron-dependent alcohol dehydrogenase%3B pyruvate-formate-lyase deactivase%3B GO_process: GO:0006113 - fermentation;codon_start=1;transl_table=11;product=fused acetaldehyde-CoA dehydrogenase/iron-dependent alcohol dehydrogenase/pyruvate-formate lyase deactivase;protein_id=AAC74323.1;db_xref=GI:1787493;db_xref=ASAP:ABE-0004164;db_xref=UniProtKB/Swiss-Prot:P0A9Q7;db_xref=EcoGene:EG10031 EMBL gene 1298598 1299245 . + . ID=.2702;gene=ychE;locus_tag=b1242;gene_synonym=ECK1236;gene_synonym=JW1229;db_xref=EcoGene:EG11342 EMBL CDS 1298598 1299245 . + 0 ID=.2703;gene=ychE;locus_tag=b1242;gene_synonym=ECK1236;gene_synonym=JW1229;function=putative transport%3B Not classified;note=putative channel protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=UPF0056 family inner membrane protein;protein_id=AAC74324.1;db_xref=GI:1787494;db_xref=ASAP:ABE-0004168;db_xref=UniProtKB/Swiss-Prot:P25743;db_xref=EcoGene:EG11342 EMBL sequence_feature 1299499 1300693 . + . ID=.2704;note=*mobile_element_type: insertion sequence:IS5U EMBL gene 1301182 1302813 . + . ID=.2705;gene=oppA;locus_tag=b1243;gene_synonym=ECK1237;gene_synonym=JW1235;db_xref=EcoGene:EG10674 EMBL CDS 1301182 1302813 . + 0 ID=.2706;gene=oppA;locus_tag=b1243;gene_synonym=ECK1237;gene_synonym=JW1235;function=transport%3B Not classified;note=oligopeptide transport%3B periplasmic binding protein%3B periplasmic-binding component of ABC superfamily%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0000270 - peptidoglycan metabolic process%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=oligopeptide ABC transporter periplasmic binding protein;protein_id=AAC74325.1;db_xref=GI:1787495;db_xref=ASAP:ABE-0004172;db_xref=UniProtKB/Swiss-Prot:P23843;db_xref=EcoGene:EG10674 EMBL gene 1302899 1303819 . + . ID=.2707;gene=oppB;locus_tag=b1244;gene_synonym=ECK1238;gene_synonym=JW1236;gene_synonym=stkB;db_xref=EcoGene:EG10675 EMBL CDS 1302899 1303819 . + 0 ID=.2708;gene=oppB;locus_tag=b1244;gene_synonym=ECK1238;gene_synonym=JW1236;gene_synonym=stkB;function=transport%3B Not classified;note=oligopeptide transport permease protein%3B membrane component of ABC superfamily%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0000270 - peptidoglycan metabolic process;codon_start=1;transl_table=11;product=oligopeptide ABC transporter permease;protein_id=AAC74326.1;db_xref=GI:1787497;db_xref=ASAP:ABE-0004174;db_xref=UniProtKB/Swiss-Prot:P0AFH2;db_xref=EcoGene:EG10675 EMBL gene 1303834 1304742 . + . ID=.2709;gene=oppC;locus_tag=b1245;gene_synonym=ECK1239;gene_synonym=JW1237;gene_synonym=stkB;db_xref=EcoGene:EG10676 EMBL CDS 1303834 1304742 . + 0 ID=.2710;gene=oppC;locus_tag=b1245;gene_synonym=ECK1239;gene_synonym=JW1237;gene_synonym=stkB;function=transport%3B Not classified;note=homolog of Salmonella oligopeptide transport permease protein%3B membrane component of ABC superfamily%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0000270 - peptidoglycan metabolic process;codon_start=1;transl_table=11;product=oligopeptide ABC transporter permease;protein_id=AAC74327.1;db_xref=GI:1787498;db_xref=ASAP:ABE-0004176;db_xref=UniProtKB/Swiss-Prot:P0AFH6;db_xref=EcoGene:EG10676 EMBL gene 1304754 1305767 . + . ID=.2711;gene=oppD;locus_tag=b1246;gene_synonym=ECK1240;gene_synonym=JW1238;db_xref=EcoGene:EG10677 EMBL CDS 1304754 1305767 . + 0 ID=.2712;gene=oppD;locus_tag=b1246;gene_synonym=ECK1240;gene_synonym=JW1238;function=transport%3B Not classified;note=homolog of Salmonella ATP-binding protein of oligopeptide ABC transport system%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0000270 - peptidoglycan metabolic process;codon_start=1;transl_table=11;product=oligopeptide ABC transporter ATPase;protein_id=AAT48129.1;db_xref=GI:48994883;db_xref=ASAP:ABE-0004178;db_xref=UniProtKB/Swiss-Prot:P76027;db_xref=EcoGene:EG10677 EMBL gene 1305764 1306768 . + . ID=.2713;gene=oppF;locus_tag=b1247;gene_synonym=ECK1241;gene_synonym=JW1239;db_xref=EcoGene:EG10678 EMBL CDS 1305764 1306768 . + 0 ID=.2714;gene=oppF;locus_tag=b1247;gene_synonym=ECK1241;gene_synonym=JW1239;function=putative transport%3B Not classified;note=homolog of Salmonella ATP-binding protein of oligopeptide ABC transport system%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0000270 - peptidoglycan metabolic process;codon_start=1;transl_table=11;product=oligopeptide ABC transporter ATPase;protein_id=AAC74329.1;db_xref=GI:1787500;db_xref=ASAP:ABE-0004182;db_xref=UniProtKB/Swiss-Prot:P77737;db_xref=EcoGene:EG10678 EMBL gene 1306821 1307150 . - . ID=.2715;gene=yciU;locus_tag=b1248;gene_synonym=ECK1242;gene_synonym=JW1240;db_xref=EcoGene:EG14256 EMBL CDS 1306821 1307150 . - 0 ID=.2716;gene=yciU;locus_tag=b1248;gene_synonym=ECK1242;gene_synonym=JW1240;codon_start=1;transl_table=11;product=UPF0263 family protein;protein_id=AAC74330.2;db_xref=GI:87081860;db_xref=ASAP:ABE-0004184;db_xref=UniProtKB/Swiss-Prot:P0A8L7;db_xref=EcoGene:EG14256 EMBL gene 1307185 1308645 . - . ID=.2717;gene=clsA;locus_tag=b1249;gene_synonym=cls;gene_synonym=ECK1243;gene_synonym=JW1241;gene_synonym=nov;gene_synonym=yciJ;db_xref=EcoGene:EG11608 EMBL CDS 1307185 1308645 . - 0 ID=.2718;gene=clsA;locus_tag=b1249;gene_synonym=cls;gene_synonym=ECK1243;gene_synonym=JW1241;gene_synonym=nov;gene_synonym=yciJ;ec_number=2.7.8.-;function=enzyme%3B Macromolecule synthesis: Phospholipids;note=cardiolipin synthase%2C a major membrane phospholipid%3B novobiocin sensitivity%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0008654 - phospholipid biosynthetic process%3B GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=cardiolipin synthase 1;protein_id=AAC74331.1;db_xref=GI:1787502;db_xref=ASAP:ABE-0004186;db_xref=UniProtKB/Swiss-Prot:P0A6H8;db_xref=EcoGene:EG11608 EMBL gene 1308788 1308961 . + . ID=.2719;gene=yciY;locus_tag=b4595;gene_synonym=ECK4405;db_xref=EcoGene:EG14393 EMBL CDS 1308788 1308961 . + 0 ID=.2720;gene=yciY;locus_tag=b4595;gene_synonym=ECK4405;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=ABP93442.1;db_xref=GI:145693122;db_xref=UniProtKB/Swiss-Prot:A5A613;db_xref=EcoGene:EG14393 EMBL gene 1309016 1310269 . - . ID=.2721;gene=kch;locus_tag=b1250;gene_synonym=ECK1244;gene_synonym=JW1242;db_xref=EcoGene:EG11606 EMBL CDS 1309016 1310269 . - 0 ID=.2722;gene=kch;locus_tag=b1250;gene_synonym=ECK1244;gene_synonym=JW1242;note=putative potassium channel protein (VIC family)%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_function: GO:0005244 - voltage-gated ion channel activity;codon_start=1;transl_table=11;product=voltage-gated potassium channel;protein_id=AAC74332.1;db_xref=GI:1787503;db_xref=ASAP:ABE-0004189;db_xref=UniProtKB/Swiss-Prot:P31069;db_xref=EcoGene:EG11606 EMBL gene 1310569 1310865 . - . ID=.2723;gene=yciI;locus_tag=b1251;gene_synonym=ECK1245;gene_synonym=JW1243;db_xref=EcoGene:EG11607 EMBL CDS 1310569 1310865 . - 0 ID=.2724;gene=yciI;locus_tag=b1251;gene_synonym=ECK1245;gene_synonym=JW1243;experiment=N-terminus verified by Edman degradation: PMID 9868784;codon_start=1;transl_table=11;product=putative DGPF domain-containing enzyme;protein_id=AAC74333.2;db_xref=GI:87081861;db_xref=ASAP:ABE-0004192;db_xref=UniProtKB/Swiss-Prot:P0AB55;db_xref=EcoGene:EG11607 EMBL gene 1311089 1311808 . + . ID=.2725;gene=tonB;locus_tag=b1252;gene_synonym=ECK1246;gene_synonym=exbA;gene_synonym=JW5195;gene_synonym=T1rec;db_xref=EcoGene:EG11012 EMBL CDS 1311089 1311808 . + 0 ID=.2726;gene=tonB;locus_tag=b1252;gene_synonym=ECK1246;gene_synonym=exbA;gene_synonym=JW5195;gene_synonym=T1rec;function=membrane%3B Transport of small molecules: Cations;note=energy transducer%3B uptake of iron%2C cyanocobalimin%3B sensitivity to phages%2C colicins%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=membrane spanning protein in TonB-ExbB-ExbD transport complex;protein_id=AAC74334.1;db_xref=GI:1787505;db_xref=ASAP:ABE-0004196;db_xref=UniProtKB/Swiss-Prot:P02929;db_xref=EcoGene:EG11012 EMBL gene 1311848 1312246 . - . ID=.2727;gene=yciA;locus_tag=b1253;gene_synonym=ECK1247;gene_synonym=JW1245;db_xref=EcoGene:EG11121 EMBL CDS 1311848 1312246 . - 0 ID=.2728;gene=yciA;locus_tag=b1253;gene_synonym=ECK1247;gene_synonym=JW1245;codon_start=1;transl_table=11;product=acyl-CoA esterase;protein_id=AAC74335.1;db_xref=GI:1787506;db_xref=ASAP:ABE-0004198;db_xref=UniProtKB/Swiss-Prot:P0A8Z0;db_xref=EcoGene:EG11121 EMBL gene 1312351 1312890 . - . ID=.2729;gene=yciB;locus_tag=b1254;gene_synonym=ECK1248;gene_synonym=ispA;gene_synonym=ispZ;gene_synonym=JW1246;db_xref=EcoGene:EG11122 EMBL CDS 1312351 1312890 . - 0 ID=.2730;gene=yciB;locus_tag=b1254;gene_synonym=ECK1248;gene_synonym=ispA;gene_synonym=ispZ;gene_synonym=JW1246;codon_start=1;transl_table=11;product=IspA family inner membrane protein;protein_id=AAC74336.1;db_xref=GI:1787507;db_xref=ASAP:ABE-0004200;db_xref=UniProtKB/Swiss-Prot:P0A710;db_xref=EcoGene:EG11122 EMBL gene 1312920 1313663 . - . ID=.2731;gene=yciC;locus_tag=b1255;gene_synonym=ECK1249;gene_synonym=JW1247;db_xref=EcoGene:EG11123 EMBL CDS 1312920 1313663 . - 0 ID=.2732;gene=yciC;locus_tag=b1255;gene_synonym=ECK1249;gene_synonym=JW1247;note=GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=UPF0259 family inner membrane protein;protein_id=AAC74337.1;db_xref=GI:1787508;db_xref=ASAP:ABE-0004204;db_xref=UniProtKB/Swiss-Prot:P21365;db_xref=EcoGene:EG11123 EMBL gene 1314020 1314658 . + . ID=.2733;gene=ompW;locus_tag=b1256;gene_synonym=ECK1250;gene_synonym=JW1248;gene_synonym=yciD;db_xref=EcoGene:EG11124 EMBL CDS 1314020 1314658 . + 0 ID=.2734;gene=ompW;locus_tag=b1256;gene_synonym=ECK1250;gene_synonym=JW1248;gene_synonym=yciD;function=putative membrane%3B Not classified;note=putative outer membrane protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane;codon_start=1;transl_table=11;product=outer membrane protein W;protein_id=AAC74338.1;db_xref=GI:1787510;db_xref=ASAP:ABE-0004210;db_xref=UniProtKB/Swiss-Prot:P0A915;db_xref=EcoGene:EG11124 EMBL gene 1314718 1315224 . - . ID=.2735;gene=yciE;locus_tag=b1257;gene_synonym=ECK1251;gene_synonym=JW1249;db_xref=EcoGene:EG11125 EMBL CDS 1314718 1315224 . - 0 ID=.2736;gene=yciE;locus_tag=b1257;gene_synonym=ECK1251;gene_synonym=JW1249;experiment=N-terminus verified by Edman degradation: PMID 8455549;codon_start=1;transl_table=11;product=putative rubrerythrin/ferritin-like metal-binding protein;protein_id=AAC74339.1;db_xref=GI:1787511;db_xref=ASAP:ABE-0004212;db_xref=UniProtKB/Swiss-Prot:P21363;db_xref=EcoGene:EG11125 EMBL gene 1315270 1315770 . - . ID=.2737;gene=yciF;locus_tag=b1258;gene_synonym=ECK1252;gene_synonym=JW1250;db_xref=EcoGene:EG11126 EMBL CDS 1315270 1315770 . - 0 ID=.2738;gene=yciF;locus_tag=b1258;gene_synonym=ECK1252;gene_synonym=JW1250;function=putative structure%3B Not classified;experiment=N-terminus verified by Edman degradation: PMID 8455549;note=putative structural proteins;codon_start=1;transl_table=11;product=putative rubrerythrin/ferritin-like metal-binding protein;protein_id=AAC74340.1;db_xref=GI:1787512;db_xref=ASAP:ABE-0004222;db_xref=UniProtKB/Swiss-Prot:P21362;db_xref=EcoGene:EG11126 EMBL gene 1315856 1316035 . - . ID=.2739;gene=yciG;locus_tag=b1259;gene_synonym=ECK1253;gene_synonym=JW1251;db_xref=EcoGene:EG11127 EMBL CDS 1315856 1316035 . - 0 ID=.2740;gene=yciG;locus_tag=b1259;gene_synonym=ECK1253;gene_synonym=JW1251;codon_start=1;transl_table=11;product=KGG family protein;protein_id=AAC74341.2;db_xref=GI:87081862;db_xref=ASAP:ABE-0004229;db_xref=UniProtKB/Swiss-Prot:P21361;db_xref=EcoGene:EG11127 EMBL gene 1316416 1317222 . - . ID=.2741;gene=trpA;locus_tag=b1260;gene_synonym=ECK1254;gene_synonym=JW1252;gene_synonym=try;gene_synonym=tryp;db_xref=EcoGene:EG11024 EMBL CDS 1316416 1317222 . - 0 ID=.2742;gene=trpA;locus_tag=b1260;gene_synonym=ECK1254;gene_synonym=JW1252;gene_synonym=try;gene_synonym=tryp;ec_number=4.2.1.20;function=enzyme%3B Amino acid biosynthesis: Tryptophan;experiment=N-terminus verified by Edman degradation: PMID 388433%2C4863752%2C9298646;note=tryptophan synthase%2C alpha protein%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0000162 - tryptophan biosynthetic process;codon_start=1;transl_table=11;product=tryptophan synthase%2C alpha subunit;protein_id=AAC74342.1;db_xref=GI:1787514;db_xref=ASAP:ABE-0004232;db_xref=UniProtKB/Swiss-Prot:P0A877;db_xref=EcoGene:EG11024 EMBL gene 1317222 1318415 . - . ID=.2743;gene=trpB;locus_tag=b1261;gene_synonym=ECK1255;gene_synonym=JW1253;db_xref=EcoGene:EG11025 EMBL CDS 1317222 1318415 . - 0 ID=.2744;gene=trpB;locus_tag=b1261;gene_synonym=ECK1255;gene_synonym=JW1253;ec_number=4.2.1.20;function=enzyme%3B Amino acid biosynthesis: Tryptophan;note=tryptophan synthase%2C beta protein%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0000162 - tryptophan biosynthetic process;codon_start=1;transl_table=11;product=tryptophan synthase%2C beta subunit;protein_id=AAC74343.1;db_xref=GI:1787515;db_xref=ASAP:ABE-0004234;db_xref=UniProtKB/Swiss-Prot:P0A879;db_xref=EcoGene:EG11025 EMBL gene 1318427 1319788 . - . ID=.2745;gene=trpC;locus_tag=b1262;gene_synonym=ECK1256;gene_synonym=JW1254;gene_synonym=trpF;db_xref=EcoGene:EG11026 EMBL CDS 1318427 1319788 . - 0 ID=.2746;gene=trpC;locus_tag=b1262;gene_synonym=ECK1256;gene_synonym=JW1254;gene_synonym=trpF;ec_number=4.1.1.48;ec_number=5.3.1.24;function=enzyme%3B Amino acid biosynthesis: Tryptophan;note=N-(5-phosphoribosyl)anthranilate isomerase and indole-3-glycerolphosphate synthetase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0000162 - tryptophan biosynthetic process;codon_start=1;transl_table=11;product=indole-3-glycerolphosphate synthetase and N-(5-phosphoribosyl)anthranilate isomerase;protein_id=AAC74344.3;db_xref=GI:558094917;db_xref=ASAP:ABE-0004238;db_xref=UniProtKB/Swiss-Prot:P00909;db_xref=EcoGene:EG11026 EMBL gene 1319789 1321384 . - . ID=.2747;gene=trpD;locus_tag=b1263;gene_synonym=ECK1257;gene_synonym=JW1255;gene_synonym=trpGD;db_xref=EcoGene:EG11027 EMBL CDS 1319789 1321384 . - 0 ID=.2748;gene=trpD;locus_tag=b1263;gene_synonym=ECK1257;gene_synonym=JW1255;gene_synonym=trpGD;ec_number=2.4.2.18;ec_number=4.1.3.27;function=enzyme%3B Amino acid biosynthesis: Tryptophan;note=anthranilate synthase component II%2C glutamine amidotransferase and phosphoribosylanthranilate transferase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0000162 - tryptophan biosynthetic process;codon_start=1;transl_table=11;product=fused glutamine amidotransferase (component II) of anthranilate synthase/anthranilate phosphoribosyl transferase;protein_id=AAC74345.1;db_xref=GI:1787517;db_xref=ASAP:ABE-0004241;db_xref=UniProtKB/Swiss-Prot:P00904;db_xref=EcoGene:EG11027 EMBL gene 1321384 1322946 . - . ID=.2749;gene=trpE;locus_tag=b1264;gene_synonym=anth;gene_synonym=ECK1258;gene_synonym=JW1256;gene_synonym=tryD;gene_synonym=tryp-4;db_xref=EcoGene:EG11028 EMBL CDS 1321384 1322946 . - 0 ID=.2750;gene=trpE;locus_tag=b1264;gene_synonym=anth;gene_synonym=ECK1258;gene_synonym=JW1256;gene_synonym=tryD;gene_synonym=tryp-4;ec_number=4.1.3.27;function=enzyme%3B Amino acid biosynthesis: Tryptophan;experiment=N-terminus verified by Edman degradation: PMID 4598537;note=anthranilate synthase component I%3B GO_process: GO:0000162 - tryptophan biosynthetic process;codon_start=1;transl_table=11;product=component I of anthranilate synthase;protein_id=AAC74346.1;db_xref=GI:1787518;db_xref=ASAP:ABE-0004244;db_xref=UniProtKB/Swiss-Prot:P00895;db_xref=EcoGene:EG11028 EMBL gene 1323038 1323082 . - . ID=.2751;gene=trpL;locus_tag=b1265;gene_synonym=ECK1259;gene_synonym=JW1257;gene_synonym=trpEE;db_xref=EcoGene:EG11274 EMBL CDS 1323038 1323082 . - 0 ID=.2752;gene=trpL;locus_tag=b1265;gene_synonym=ECK1259;gene_synonym=JW1257;gene_synonym=trpEE;function=leader%3B Amino acid biosynthesis: Tryptophan;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0000162 - tryptophan biosynthetic process;codon_start=1;transl_table=11;product=trp operon leader peptide;protein_id=AAC74347.1;db_xref=GI:1787519;db_xref=ASAP:ABE-0004246;db_xref=UniProtKB/Swiss-Prot:P0AD92;db_xref=EcoGene:EG11274 EMBL gene 1323220 1324101 . + . ID=.2753;gene=yciV;locus_tag=b1266;gene_synonym=ECK1260;gene_synonym=JW1258;gene_synonym=trpH;db_xref=EcoGene:EG14257 EMBL CDS 1323220 1324101 . + 0 ID=.2754;gene=yciV;locus_tag=b1266;gene_synonym=ECK1260;gene_synonym=JW1258;gene_synonym=trpH;function=putative enzyme%3B Not classified;note=putative enzymes;codon_start=1;transl_table=11;product=PHP domain protein;protein_id=AAC74348.1;db_xref=GI:1787520;db_xref=ASAP:ABE-0004252;db_xref=UniProtKB/Swiss-Prot:P77766;db_xref=EcoGene:EG14257 EMBL gene 1324098 1324718 . + . ID=.2755;gene=yciO;locus_tag=b1267;gene_synonym=ECK1261;gene_synonym=JW5196;db_xref=EcoGene:EG12967 EMBL CDS 1324098 1324718 . + 0 ID=.2756;gene=yciO;locus_tag=b1267;gene_synonym=ECK1261;gene_synonym=JW5196;codon_start=1;transl_table=11;product=putative RNA binding protein;protein_id=AAC74349.2;db_xref=GI:87081864;db_xref=ASAP:ABE-0004254;db_xref=UniProtKB/Swiss-Prot:P0AFR4;db_xref=EcoGene:EG12967 EMBL gene 1324746 1326641 . + . ID=.2757;gene=yciQ;locus_tag=b1268;gene_synonym=ECK1262;gene_synonym=JW5197;gene_synonym=yciP;db_xref=EcoGene:EG12969 EMBL CDS 1324746 1326641 . + 0 ID=.2758;gene=yciQ;locus_tag=b1268;gene_synonym=ECK1262;gene_synonym=JW5197;gene_synonym=yciP;codon_start=1;transl_table=11;product=enhancer of membrane protein expression%3B putative inner membrane protein;protein_id=AAC74350.1;db_xref=GI:1787522;db_xref=ASAP:ABE-0004256;db_xref=UniProtKB/Swiss-Prot:P45848;db_xref=EcoGene:EG12969 EMBL gene 1326852 1327727 . + . ID=.2759;gene=rluB;locus_tag=b1269;gene_synonym=ECK1263;gene_synonym=JW1261;gene_synonym=yciL;db_xref=EcoGene:EG12433 EMBL CDS 1326852 1327727 . + 0 ID=.2760;gene=rluB;locus_tag=b1269;gene_synonym=ECK1263;gene_synonym=JW1261;gene_synonym=yciL;ec_number=4.2.1.70;function=enzyme%3B rRNA modification;note=GO_process: GO:0009451 - RNA modification;codon_start=1;transl_table=11;product=23S rRNA pseudouridine(2605) synthase;protein_id=AAC74351.1;db_xref=GI:1787524;db_xref=ASAP:ABE-0004259;db_xref=UniProtKB/Swiss-Prot:P37765;db_xref=EcoGene:EG12433 EMBL repeat_region 1327737 1327755 . + . ID=.2761;note=REP109 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 1327767 1328357 . - . ID=.2762;gene=btuR;locus_tag=b1270;gene_synonym=cobA;gene_synonym=ECK1264;gene_synonym=JW1262;db_xref=EcoGene:EG10130 EMBL CDS 1327767 1328357 . - 0 ID=.2763;gene=btuR;locus_tag=b1270;gene_synonym=cobA;gene_synonym=ECK1264;gene_synonym=JW1262;ec_number=2.5.1.-;ec_number=2.5.1.17;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Cobalamin;note=cob(I)alamin adenolsyltransferase%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=AAC74352.1;db_xref=GI:1787525;db_xref=ASAP:ABE-0004261;db_xref=UniProtKB/Swiss-Prot:P0A9H5;db_xref=EcoGene:EG10130 EMBL gene 1328354 1329112 . - . ID=.2764;gene=yciK;locus_tag=b1271;gene_synonym=ECK1265;gene_synonym=JW1263;db_xref=EcoGene:EG11759 EMBL CDS 1328354 1329112 . - 0 ID=.2765;gene=yciK;locus_tag=b1271;gene_synonym=ECK1265;gene_synonym=JW1263;function=putative enzyme%3B Not classified;note=putative oxidoreductase;codon_start=1;transl_table=11;product=putative EmrKY-TolC system oxoacyl-(acyl carrier protein) reductase;protein_id=AAC74353.1;db_xref=GI:1787526;db_xref=ASAP:ABE-0004263;db_xref=UniProtKB/Swiss-Prot:P31808;db_xref=EcoGene:EG11759 EMBL gene 1329332 1330381 . + . ID=.2766;gene=sohB;locus_tag=b1272;gene_synonym=ECK1266;gene_synonym=JW1264;db_xref=EcoGene:EG10956 EMBL CDS 1329332 1330381 . + 0 ID=.2767;gene=sohB;locus_tag=b1272;gene_synonym=ECK1266;gene_synonym=JW1264;function=putative enzyme%3B Not classified;note=putative protease;codon_start=1;transl_table=11;product=inner membrane protein%2C S49 peptidase family protein;protein_id=AAC74354.1;db_xref=GI:1787527;db_xref=ASAP:ABE-0004267;db_xref=UniProtKB/Swiss-Prot:P0AG14;db_xref=EcoGene:EG10956 EMBL gene 1330417 1330668 . - . ID=.2768;gene=yciN;locus_tag=b1273;gene_synonym=ECK1267;gene_synonym=JW1265;db_xref=EcoGene:EG12868 EMBL CDS 1330417 1330668 . - 0 ID=.2769;gene=yciN;locus_tag=b1273;gene_synonym=ECK1267;gene_synonym=JW1265;experiment=N-terminus verified by Edman degradation: PMID 9868784;codon_start=1;transl_table=11;product=DUF2498 protein YciN;protein_id=AAC74355.1;db_xref=GI:1787528;db_xref=ASAP:ABE-0004269;db_xref=UniProtKB/Swiss-Prot:P0AB61;db_xref=EcoGene:EG12868 EMBL gene 1331048 1333645 . + . ID=.2770;gene=topA;locus_tag=b1274;gene_synonym=asuA?;gene_synonym=ECK1268;gene_synonym=JW1266;gene_synonym=supX;db_xref=EcoGene:EG11013 EMBL CDS 1331048 1333645 . + 0 ID=.2771;gene=topA;locus_tag=b1274;gene_synonym=asuA?;gene_synonym=ECK1268;gene_synonym=JW1266;gene_synonym=supX;ec_number=5.99.1.2;function=enzyme%3B DNA - replication%2C repair%2C restriction/modification;note=DNA topoisomerase type I%2C omega protein%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006261 - DNA-dependent DNA replication%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=DNA topoisomerase I%2C omega subunit;protein_id=AAC74356.1;db_xref=GI:1787529;db_xref=ASAP:ABE-0004275;db_xref=UniProtKB/Swiss-Prot:P06612;db_xref=EcoGene:EG11013 EMBL gene 1333855 1334829 . + . ID=.2772;gene=cysB;locus_tag=b1275;gene_synonym=ECK1269;gene_synonym=JW1267;db_xref=EcoGene:EG10184 EMBL CDS 1333855 1334829 . + 0 ID=.2773;gene=cysB;locus_tag=b1275;gene_synonym=ECK1269;gene_synonym=JW1267;function=transport%3B Amino acid biosynthesis: Cysteine;experiment=N-terminus verified by Edman degradation: PMID 2182030;note=positive transcriptional regulator for cysteine regulon%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0019344 - cysteine biosynthetic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=N-acetylserine-responsive cysteine regulon transcriptional activator%3B autorepressor;protein_id=AAC74357.1;db_xref=GI:1787530;db_xref=ASAP:ABE-0004279;db_xref=UniProtKB/Swiss-Prot:P0A9F3;db_xref=EcoGene:EG10184 EMBL gene 1335124 1335288 . + . ID=.2774;gene=ymiA;locus_tag=b4522;gene_synonym=ECK4433;db_xref=EcoGene:EG14463 EMBL CDS 1335124 1335288 . + 0 ID=.2775;gene=ymiA;locus_tag=b4522;gene_synonym=ECK4433;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=ABD18655.2;db_xref=GI:558094918;db_xref=UniProtKB/Swiss-Prot:P0CB62;db_xref=EcoGene:EG14463 EMBL gene 1335291 1335458 . + . ID=.2776;gene=yciX;locus_tag=b4523;gene_synonym=ECK1270;gene_synonym=JW5198;gene_synonym=JW5199;db_xref=EcoGene:EG14351 EMBL CDS 1335291 1335458 . + 0 ID=.2777;gene=yciX;locus_tag=b4523;gene_synonym=ECK1270;gene_synonym=JW5198;gene_synonym=JW5199;note=GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=ABD18656.2;db_xref=GI:145693123;db_xref=ASAP:ABE-0285043;db_xref=ASAP:ABE-0285044;db_xref=ASAP:ABE-0285107;db_xref=UniProtKB/Swiss-Prot:P58094;db_xref=EcoGene:EG14351 EMBL gene 1335831 1338506 . + . ID=.2778;gene=acnA;locus_tag=b1276;gene_synonym=acn;gene_synonym=ECK1271;gene_synonym=JW1268;db_xref=EcoGene:EG11325 EMBL CDS 1335831 1338506 . + 0 ID=.2779;gene=acnA;locus_tag=b1276;gene_synonym=acn;gene_synonym=ECK1271;gene_synonym=JW1268;ec_number=4.2.1.3;function=enzyme%3B Energy metabolism%2C carbon: TCA cycle;note=aconitate hydrase 1%3B GO_process: GO:0006099 - tricarboxylic acid cycle%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=aconitate hydratase 1%3B aconitase A;protein_id=AAC74358.1;db_xref=GI:1787531;db_xref=ASAP:ABE-0004283;db_xref=UniProtKB/Swiss-Prot:P25516;db_xref=EcoGene:EG11325 EMBL gene 1338570 1339160 . - . ID=.2780;gene=ribA;locus_tag=b1277;gene_synonym=ECK1272;gene_synonym=JW1269;db_xref=EcoGene:EG11331 EMBL CDS 1338570 1339160 . - 0 ID=.2781;gene=ribA;locus_tag=b1277;gene_synonym=ECK1272;gene_synonym=JW1269;ec_number=3.5.4.25;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Riboflavin;experiment=N-terminus verified by Edman degradation: PMID 8320220;codon_start=1;transl_table=11;product=GTP cyclohydrolase II;protein_id=AAC74359.1;db_xref=GI:1787533;db_xref=ASAP:ABE-0004285;db_xref=UniProtKB/Swiss-Prot:P0A7I7;db_xref=EcoGene:EG11331 EMBL gene 1339330 1340094 . + . ID=.2782;gene=pgpB;locus_tag=b1278;gene_synonym=ECK1273;gene_synonym=JW1270;db_xref=EcoGene:EG10705 EMBL CDS 1339330 1340094 . + 0 ID=.2783;gene=pgpB;locus_tag=b1278;gene_synonym=ECK1273;gene_synonym=JW1270;ec_number=3.1.3.27;function=enzyme%3B Macromolecule synthesis%2C modification: Phospholipids;note=non-essential phosphatidylglycerophosphate phosphatase%2C membrane bound%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0008654 - phospholipid biosynthetic process;codon_start=1;transl_table=11;product=phosphatidylglycerophosphatase B;protein_id=AAC74360.1;db_xref=GI:1787534;db_xref=ASAP:ABE-0004294;db_xref=UniProtKB/Swiss-Prot:P0A924;db_xref=EcoGene:EG10705 EMBL gene 1340243 1340551 . + . ID=.2784;gene=yciS;locus_tag=b1279;gene_synonym=ECK1274;gene_synonym=JW1271;gene_synonym=lapA;db_xref=EcoGene:EG13904 EMBL CDS 1340243 1340551 . + 0 ID=.2785;gene=yciS;locus_tag=b1279;gene_synonym=ECK1274;gene_synonym=JW1271;gene_synonym=lapA;codon_start=1;transl_table=11;product=DUF1049 family inner membrane protein%2C function unknown;protein_id=AAC74361.1;db_xref=GI:1787535;db_xref=ASAP:ABE-0004298;db_xref=UniProtKB/Swiss-Prot:P0ACV4;db_xref=EcoGene:EG13904 EMBL gene 1340558 1341727 . + . ID=.2786;gene=yciM;locus_tag=b1280;gene_synonym=ECK1275;gene_synonym=JW1272;gene_synonym=lapB;db_xref=EcoGene:EG12691 EMBL CDS 1340558 1341727 . + 0 ID=.2787;gene=yciM;locus_tag=b1280;gene_synonym=ECK1275;gene_synonym=JW1272;gene_synonym=lapB;function=putative factor%3B Not classified;note=putative heat shock protein;codon_start=1;transl_table=11;product=LPS regulatory protein%3B putative modulator of LpxC proteolysis;protein_id=AAC74362.1;db_xref=GI:2367116;db_xref=ASAP:ABE-0004300;db_xref=UniProtKB/Swiss-Prot:P0AB58;db_xref=EcoGene:EG12691 EMBL gene 1341921 1342658 . + . ID=.2788;gene=pyrF;locus_tag=b1281;gene_synonym=ECK1276;gene_synonym=JW1273;db_xref=EcoGene:EG10809 EMBL CDS 1341921 1342658 . + 0 ID=.2789;gene=pyrF;locus_tag=b1281;gene_synonym=ECK1276;gene_synonym=JW1273;ec_number=4.1.1.23;function=enzyme%3B Pyrimidine ribonucleotide biosynthesis;note=GO_process: GO:0006221 - pyrimidine nucleotide biosynthetic process%3B GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion;codon_start=1;transl_table=11;product=orotidine-5'-phosphate decarboxylase;protein_id=AAC74363.1;db_xref=GI:1787537;db_xref=ASAP:ABE-0004304;db_xref=UniProtKB/Swiss-Prot:P08244;db_xref=EcoGene:EG10809 EMBL gene 1342658 1342984 . + . ID=.2790;gene=yciH;locus_tag=b1282;gene_synonym=ECK1277;gene_synonym=JW1274;db_xref=EcoGene:EG11128 EMBL CDS 1342658 1342984 . + 0 ID=.2791;gene=yciH;locus_tag=b1282;gene_synonym=ECK1277;gene_synonym=JW1274;codon_start=1;transl_table=11;product=initiation factor function partial mimic%2C SUI1 family;protein_id=AAC74364.2;db_xref=GI:87081867;db_xref=ASAP:ABE-0004307;db_xref=UniProtKB/Swiss-Prot:P08245;db_xref=EcoGene:EG11128 EMBL gene 1343110 1343328 . - . ID=.2792;gene=osmB;locus_tag=b1283;gene_synonym=ECK1278;gene_synonym=JW1275;db_xref=EcoGene:EG10679 EMBL CDS 1343110 1343328 . - 0 ID=.2793;gene=osmB;locus_tag=b1283;gene_synonym=ECK1278;gene_synonym=JW1275;function=putative membrane%3B Osmotic adaptation;note=osmotically inducible lipoprotein%3B GO_process: GO:0006970 - response to osmotic stress;codon_start=1;transl_table=11;product=osmotically and stress inducible lipoprotein;protein_id=AAC74365.1;db_xref=GI:1787539;db_xref=ASAP:ABE-0004309;db_xref=UniProtKB/Swiss-Prot:P0ADA7;db_xref=EcoGene:EG10679 EMBL gene 1343597 1344346 . - . ID=.2794;gene=yciT;locus_tag=b1284;gene_synonym=deoT;gene_synonym=ECK1279;gene_synonym=JW1276;db_xref=EcoGene:EG13905 EMBL CDS 1343597 1344346 . - 0 ID=.2795;gene=yciT;locus_tag=b1284;gene_synonym=deoT;gene_synonym=ECK1279;gene_synonym=JW1276;function=putative regulator%3B Not classified;note=putative DEOR-type transcriptional regulator%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=global regulator of transcription%3B DeoR family;protein_id=AAC74366.1;db_xref=GI:1787540;db_xref=ASAP:ABE-0004312;db_xref=UniProtKB/Swiss-Prot:P76034;db_xref=EcoGene:EG13905 EMBL gene 1344436 1344609 . - . ID=.2796;gene=yciZ;locus_tag=b4596;gene_synonym=deoL;gene_synonym=ECK4406;db_xref=EcoGene:EG14460 EMBL CDS 1344436 1344609 . - 0 ID=.2797;gene=yciZ;locus_tag=b4596;gene_synonym=deoL;gene_synonym=ECK4406;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=ABP93443.1;db_xref=GI:145693124;db_xref=UniProtKB/Swiss-Prot:A5A614;db_xref=EcoGene:EG14460 EMBL gene 1344757 1346742 . - . ID=.2798;gene=gmr;locus_tag=b1285;gene_synonym=ECK1280;gene_synonym=JW1278;gene_synonym=yciR;db_xref=EcoGene:EG13415 EMBL CDS 1344757 1346742 . - 0 ID=.2799;gene=gmr;locus_tag=b1285;gene_synonym=ECK1280;gene_synonym=JW1278;gene_synonym=yciR;codon_start=1;transl_table=11;product=cyclic-di-GMP phosphodiesterase%3B csgD regulator%3B modulator of RNase II stability;protein_id=AAC74367.1;db_xref=GI:1787541;db_xref=ASAP:ABE-0004317;db_xref=UniProtKB/Swiss-Prot:P77334;db_xref=EcoGene:EG13415 EMBL gene 1346796 1346900 . + . ID=.2800;gene=ymiB;locus_tag=b4672;gene_synonym=ECK4487;db_xref=EcoGene:EG14477 EMBL CDS 1346796 1346900 . + 0 ID=.2801;gene=ymiB;locus_tag=b4672;gene_synonym=ECK4487;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=ACO59991.1;db_xref=GI:226510937;db_xref=UniProtKB/Swiss-Prot:C1P5Z9;db_xref=EcoGene:EG14477 EMBL gene 1346978 1348912 . - . ID=.2802;gene=rnb;locus_tag=b1286;gene_synonym=ECK1281;gene_synonym=JW1279;db_xref=EcoGene:EG11620 EMBL CDS 1346978 1348912 . - 0 ID=.2803;gene=rnb;locus_tag=b1286;gene_synonym=ECK1281;gene_synonym=JW1279;ec_number=3.1.13.1;function=enzyme%3B Degradation of RNA;note=RNase II%2C mRNA degradation%3B GO_process: GO:0006401 - RNA catabolic process;codon_start=1;transl_table=11;product=ribonuclease II;protein_id=AAC74368.1;db_xref=GI:1787542;db_xref=ASAP:ABE-0004320;db_xref=UniProtKB/Swiss-Prot:P30850;db_xref=EcoGene:EG11620 EMBL gene 1348980 1350107 . - . ID=.2804;gene=yciW;locus_tag=b1287;gene_synonym=ECK1282;gene_synonym=JW5200;db_xref=EcoGene:EG14262 EMBL CDS 1348980 1350107 . - 0 ID=.2805;gene=yciW;locus_tag=b1287;gene_synonym=ECK1282;gene_synonym=JW5200;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=putative oxidoreductase;protein_id=AAC74369.2;db_xref=GI:87081868;db_xref=ASAP:ABE-0004322;db_xref=UniProtKB/Swiss-Prot:P76035;db_xref=EcoGene:EG14262 EMBL gene 1350251 1351039 . - . ID=.2806;gene=fabI;locus_tag=b1288;gene_synonym=ECK1283;gene_synonym=envM;gene_synonym=gts;gene_synonym=JW1281;gene_synonym=qmeA;db_xref=EcoGene:EG11528 EMBL CDS 1350251 1351039 . - 0 ID=.2807;gene=fabI;locus_tag=b1288;gene_synonym=ECK1283;gene_synonym=envM;gene_synonym=gts;gene_synonym=JW1281;gene_synonym=qmeA;ec_number=1.3.1.9;function=enzyme%3B Fatty acid and phosphatidic acid biosynthesis;note=enoyl-[acyl-carrier-protein] reductase (NADH)%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=enoyl-[acyl-carrier-protein] reductase%2C NADH-dependent;protein_id=AAC74370.1;db_xref=GI:1787545;db_xref=ASAP:ABE-0004327;db_xref=UniProtKB/Swiss-Prot:P0AEK4;db_xref=EcoGene:EG11528 EMBL gene 1351407 1351760 . - . ID=.2808;gene=ycjD;locus_tag=b1289;gene_synonym=ECK1284;gene_synonym=JW1282;db_xref=EcoGene:EG12653 EMBL CDS 1351407 1351760 . - 0 ID=.2809;gene=ycjD;locus_tag=b1289;gene_synonym=ECK1284;gene_synonym=JW1282;codon_start=1;transl_table=11;product=DUF559 family endonuclease-related protein;protein_id=AAC74371.1;db_xref=GI:1787546;db_xref=ASAP:ABE-0004333;db_xref=UniProtKB/Swiss-Prot:P45736;db_xref=EcoGene:EG12653 EMBL gene 1351828 1352634 . - . ID=.2810;gene=sapF;locus_tag=b1290;gene_synonym=ECK1285;gene_synonym=JW1283;db_xref=EcoGene:EG12305 EMBL CDS 1351828 1352634 . - 0 ID=.2811;gene=sapF;locus_tag=b1290;gene_synonym=ECK1285;gene_synonym=JW1283;function=putative transport%3B Not classified;note=putative ATP-binding protein of peptide transport system%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009063 - cellular amino acid catabolic process;codon_start=1;transl_table=11;product=antimicrobial peptide ABC transporter ATPase;protein_id=AAC74372.1;db_xref=GI:1787547;db_xref=ASAP:ABE-0004339;db_xref=UniProtKB/Swiss-Prot:P0AAH8;db_xref=EcoGene:EG12305 EMBL gene 1352636 1353628 . - . ID=.2812;gene=sapD;locus_tag=b1291;gene_synonym=ECK1286;gene_synonym=JW1284;gene_synonym=trkE;db_xref=EcoGene:EG12304 EMBL CDS 1352636 1353628 . - 0 ID=.2813;gene=sapD;locus_tag=b1291;gene_synonym=ECK1286;gene_synonym=JW1284;gene_synonym=trkE;function=putative transport%3B Not classified;note=putative ATP-binding protein of peptide transport system%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009063 - cellular amino acid catabolic process;codon_start=1;transl_table=11;product=antimicrobial peptide ABC transporter ATPase;protein_id=AAC74373.1;db_xref=GI:1787548;db_xref=ASAP:ABE-0004342;db_xref=UniProtKB/Swiss-Prot:P0AAH4;db_xref=EcoGene:EG12304 EMBL gene 1353628 1354518 . - . ID=.2814;gene=sapC;locus_tag=b1292;gene_synonym=ECK1287;gene_synonym=JW1285;db_xref=EcoGene:EG20256 EMBL CDS 1353628 1354518 . - 0 ID=.2815;gene=sapC;locus_tag=b1292;gene_synonym=ECK1287;gene_synonym=JW1285;function=putative transport%3B Not classified;note=homolog of Salmonella peptide transport permease protein%3B membrane component of ABC superfamily%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=antimicrobial peptide transport ABC transporter permease;protein_id=AAC74374.1;db_xref=GI:1787549;db_xref=ASAP:ABE-0004348;db_xref=UniProtKB/Swiss-Prot:P0AGH5;db_xref=EcoGene:EG20256 EMBL gene 1354505 1355470 . - . ID=.2816;gene=sapB;locus_tag=b1293;gene_synonym=ECK1288;gene_synonym=JW1286;db_xref=EcoGene:EG20255 EMBL CDS 1354505 1355470 . - 0 ID=.2817;gene=sapB;locus_tag=b1293;gene_synonym=ECK1288;gene_synonym=JW1286;function=putative transport%3B Not classified;note=homolog of Salmonella peptide transport permease protein%3B membrane component of ABC superfamily%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=antimicrobial peptide transport ABC transporter permease;protein_id=AAC74375.1;db_xref=GI:1787550;db_xref=ASAP:ABE-0004350;db_xref=UniProtKB/Swiss-Prot:P0AGH3;db_xref=EcoGene:EG20255 EMBL gene 1355467 1357110 . - . ID=.2818;gene=sapA;locus_tag=b1294;gene_synonym=ECK1289;gene_synonym=JW1287;db_xref=EcoGene:EG20254 EMBL CDS 1355467 1357110 . - 0 ID=.2819;gene=sapA;locus_tag=b1294;gene_synonym=ECK1289;gene_synonym=JW1287;function=putative transport%3B Not classified;note=homolog of Salmonella peptide transport periplasmic protein%3B periplasmic-binding component of ABC superfamily%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0009063 - cellular amino acid catabolic process;codon_start=1;transl_table=11;product=antimicrobial peptide transport ABC transporter periplasmic binding protein;protein_id=AAC74376.1;db_xref=GI:1787551;db_xref=ASAP:ABE-0004354;db_xref=UniProtKB/Swiss-Prot:Q47622;db_xref=EcoGene:EG20254 EMBL repeat_region 1357359 1357392 . + . ID=.2820;note=REP110 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 1357423 1357668 . - . ID=.2821;gene=ymjA;locus_tag=b1295;gene_synonym=ECK1290;gene_synonym=JW1288;db_xref=EcoGene:EG14295 EMBL CDS 1357423 1357668 . - 0 ID=.2822;gene=ymjA;locus_tag=b1295;gene_synonym=ECK1290;gene_synonym=JW1288;codon_start=1;transl_table=11;product=DUF2543 family protein;protein_id=AAC74377.1;db_xref=GI:1787552;db_xref=ASAP:ABE-0004359;db_xref=UniProtKB/Swiss-Prot:P0ACV8;db_xref=EcoGene:EG14295 EMBL repeat_region 1357770 1357799 . + . ID=.2823;note=REP111 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 1357802 1359187 . - . ID=.2824;gene=puuP;locus_tag=b1296;gene_synonym=ECK1291;gene_synonym=JW1289;gene_synonym=ycjJ;db_xref=EcoGene:EG13907 EMBL CDS 1357802 1359187 . - 0 ID=.2825;gene=puuP;locus_tag=b1296;gene_synonym=ECK1291;gene_synonym=JW1289;gene_synonym=ycjJ;function=transport%3B Degradation of small molecules: Carbon compounds;note=putative amino acid/amine transport protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putrescine importer;protein_id=AAC74378.2;db_xref=GI:87081869;db_xref=ASAP:ABE-0004362;db_xref=UniProtKB/Swiss-Prot:P76037;db_xref=EcoGene:EG13907 EMBL gene 1359490 1360908 . - . ID=.2826;gene=puuA;locus_tag=b1297;gene_synonym=ECK1292;gene_synonym=JW5201;gene_synonym=ycjK;db_xref=EcoGene:EG13908 EMBL CDS 1359490 1360908 . - 0 ID=.2827;gene=puuA;locus_tag=b1297;gene_synonym=ECK1292;gene_synonym=JW5201;gene_synonym=ycjK;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=putative glutamine synthetase%3B GO_process: GO:0006542 - glutamine biosynthetic process%3B GO_process: GO:0006807 - nitrogen compound metabolic process;codon_start=1;transl_table=11;product=glutamate--putrescine ligase;protein_id=AAC74379.2;db_xref=GI:87081870;db_xref=ASAP:ABE-0004365;db_xref=UniProtKB/Swiss-Prot:P78061;db_xref=EcoGene:EG13908 EMBL gene 1361120 1361884 . + . ID=.2828;gene=puuD;locus_tag=b1298;gene_synonym=ECK1293;gene_synonym=JW1291;gene_synonym=ycjL;db_xref=EcoGene:EG13909 EMBL CDS 1361120 1361884 . + 0 ID=.2829;gene=puuD;locus_tag=b1298;gene_synonym=ECK1293;gene_synonym=JW1291;gene_synonym=ycjL;function=enzyme%3B Degradation of small molecules: Carbon compounds;experiment=N-terminus verified by Edman degradation: PMID 15590624;note=probable amidotransferase subunit%3B GO_process: GO:0009310 - amine catabolic process;codon_start=1;transl_table=11;product=gamma-glutamyl-gamma-aminobutyrate hydrolase;protein_id=AAC74380.2;db_xref=GI:87081871;db_xref=ASAP:ABE-0004369;db_xref=UniProtKB/Swiss-Prot:P76038;db_xref=EcoGene:EG13909 EMBL gene 1361911 1362468 . + . ID=.2830;gene=puuR;locus_tag=b1299;gene_synonym=ECK1294;gene_synonym=JW1292;gene_synonym=ycjC;db_xref=EcoGene:EG12431 EMBL CDS 1361911 1362468 . + 0 ID=.2831;gene=puuR;locus_tag=b1299;gene_synonym=ECK1294;gene_synonym=JW1292;gene_synonym=ycjC;function=regulator%3B Degradation of small molecules: Carbon compounds;codon_start=1;transl_table=11;product=repressor for the divergent puu operons%2C putrescine inducible;protein_id=AAC74381.1;db_xref=GI:1787557;db_xref=ASAP:ABE-0004371;db_xref=UniProtKB/Swiss-Prot:P0A9U6;db_xref=EcoGene:EG12431 EMBL gene 1362743 1364230 . + . ID=.2832;gene=puuC;locus_tag=b1300;gene_synonym=aldH;gene_synonym=ECK1295;gene_synonym=JW1293;db_xref=EcoGene:EG10036 EMBL CDS 1362743 1364230 . + 0 ID=.2833;gene=puuC;locus_tag=b1300;gene_synonym=aldH;gene_synonym=ECK1295;gene_synonym=JW1293;ec_number=1.2.1.3;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=aldehyde dehydrogenase%2C prefers NADP over NAD%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006113 - fermentation;codon_start=1;transl_table=11;product=gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase%3B succinate semialdehyde dehydrogenase;protein_id=AAC74382.1;db_xref=GI:1787558;db_xref=ASAP:ABE-0004376;db_xref=UniProtKB/Swiss-Prot:P23883;db_xref=EcoGene:EG10036 EMBL gene 1364232 1365512 . + . ID=.2834;gene=puuB;locus_tag=b1301;gene_synonym=ECK1296;gene_synonym=JW1294;gene_synonym=ordL;gene_synonym=ycjA;db_xref=EcoGene:EG11822 EMBL CDS 1364232 1365512 . + 0 ID=.2835;gene=puuB;locus_tag=b1301;gene_synonym=ECK1296;gene_synonym=JW1294;gene_synonym=ordL;gene_synonym=ycjA;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=probable oxidoreductase;codon_start=1;transl_table=11;product=gamma-glutamylputrescine oxidoreductase;protein_id=AAC74383.1;db_xref=GI:1787559;db_xref=ASAP:ABE-0004378;db_xref=UniProtKB/Swiss-Prot:P37906;db_xref=EcoGene:EG11822 EMBL gene 1365550 1366815 . + . ID=.2836;gene=puuE;locus_tag=b1302;gene_synonym=ECK1297;gene_synonym=goaG;gene_synonym=JW1295;db_xref=EcoGene:EG13187 EMBL CDS 1365550 1366815 . + 0 ID=.2837;gene=puuE;locus_tag=b1302;gene_synonym=ECK1297;gene_synonym=goaG;gene_synonym=JW1295;ec_number=2.6.1.19;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=4-aminobutyrate aminotransferase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009310 - amine catabolic process%3B GO_process: GO:0008615 - pyridoxine biosynthetic process;codon_start=1;transl_table=11;product=4-aminobutyrate aminotransferase%2C PLP-dependent;protein_id=AAC74384.1;db_xref=GI:1787560;db_xref=ASAP:ABE-0004380;db_xref=UniProtKB/Swiss-Prot:P50457;db_xref=EcoGene:EG13187 EMBL repeat_region 1366833 1366913 . + . ID=.2838;note=RIP112 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 1366935 1367912 . - . ID=.2839;gene=pspF;locus_tag=b1303;gene_synonym=ECK1298;gene_synonym=JW1296;gene_synonym=ycjB;db_xref=EcoGene:EG12344 EMBL CDS 1366935 1367912 . - 0 ID=.2840;gene=pspF;locus_tag=b1303;gene_synonym=ECK1298;gene_synonym=JW1296;gene_synonym=ycjB;function=regulator%3B Phage-related functions and prophages;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=psp operon transcriptional activator;protein_id=AAC74385.2;db_xref=GI:87081872;db_xref=ASAP:ABE-0004383;db_xref=UniProtKB/Swiss-Prot:P37344;db_xref=EcoGene:EG12344 EMBL gene 1368079 1368747 . + . ID=.2841;gene=pspA;locus_tag=b1304;gene_synonym=cog;gene_synonym=ECK1299;gene_synonym=JW1297;db_xref=EcoGene:EG10776 EMBL CDS 1368079 1368747 . + 0 ID=.2842;gene=pspA;locus_tag=b1304;gene_synonym=cog;gene_synonym=ECK1299;gene_synonym=JW1297;function=factor%3B Phage-related functions and prophages;note=phage shock protein%2C inner membrane protein%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=regulatory protein for phage-shock-protein operon;protein_id=AAC74386.1;db_xref=GI:2367118;db_xref=ASAP:ABE-0004387;db_xref=UniProtKB/Swiss-Prot:P0AFM6;db_xref=EcoGene:EG10776 EMBL gene 1368801 1369025 . + . ID=.2843;gene=pspB;locus_tag=b1305;gene_synonym=ECK1300;gene_synonym=JW1298;db_xref=EcoGene:EG10777 EMBL CDS 1368801 1369025 . + 0 ID=.2844;gene=pspB;locus_tag=b1305;gene_synonym=ECK1300;gene_synonym=JW1298;function=IS%2C phage%2C Tn%3B Phage-related functions and prophages;note=phage shock protein%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=psp operon transcription co-activator;protein_id=AAC74387.1;db_xref=GI:1787563;db_xref=ASAP:ABE-0004389;db_xref=UniProtKB/Swiss-Prot:P0AFM9;db_xref=EcoGene:EG10777 EMBL gene 1369025 1369384 . + . ID=.2845;gene=pspC;locus_tag=b1306;gene_synonym=ECK1301;gene_synonym=JW1299;db_xref=EcoGene:EG10778 EMBL CDS 1369025 1369384 . + 0 ID=.2846;gene=pspC;locus_tag=b1306;gene_synonym=ECK1301;gene_synonym=JW1299;function=factor%3B Phage-related functions and prophages;note=phage shock protein: activates phage shock-protein expression%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=psp operon transcription co-activator;protein_id=AAC74388.1;db_xref=GI:1787564;db_xref=ASAP:ABE-0004391;db_xref=UniProtKB/Swiss-Prot:P0AFN2;db_xref=EcoGene:EG10778 EMBL gene 1369393 1369614 . + . ID=.2847;gene=pspD;locus_tag=b1307;gene_synonym=ECK1302;gene_synonym=JW1300;db_xref=EcoGene:EG10779 EMBL CDS 1369393 1369614 . + 0 ID=.2848;gene=pspD;locus_tag=b1307;gene_synonym=ECK1302;gene_synonym=JW1300;function=IS%2C phage%2C Tn%3B Phage-related functions and prophages;note=phage shock protein;codon_start=1;transl_table=11;product=peripheral inner membrane phage-shock protein;protein_id=AAC74389.1;db_xref=GI:1787565;db_xref=ASAP:ABE-0004394;db_xref=UniProtKB/Swiss-Prot:P0AFV8;db_xref=EcoGene:EG10779 EMBL gene 1369689 1370003 . + . ID=.2849;gene=pspE;locus_tag=b1308;gene_synonym=ECK1303;gene_synonym=JW1301;db_xref=EcoGene:EG10780 EMBL CDS 1369689 1370003 . + 0 ID=.2850;gene=pspE;locus_tag=b1308;gene_synonym=ECK1303;gene_synonym=JW1301;ec_number=2.8.1.1;function=IS%2C phage%2C Tn%3B Phage-related functions and prophages;note=phage shock protein;codon_start=1;transl_table=11;product=thiosulfate:cyanide sulfurtransferase (rhodanese);protein_id=AAC74390.1;db_xref=GI:1787567;db_xref=ASAP:ABE-0004397;db_xref=UniProtKB/Swiss-Prot:P23857;db_xref=EcoGene:EG10780 EMBL gene 1370216 1371895 . + . ID=.2851;gene=ycjM;locus_tag=b1309;gene_synonym=ECK1304;gene_synonym=JW1302;db_xref=EcoGene:EG13910 EMBL CDS 1370216 1371895 . + 0 ID=.2852;gene=ycjM;locus_tag=b1309;gene_synonym=ECK1304;gene_synonym=JW1302;function=putative enzyme%3B Not classified;note=putative polysaccharide hydrolase%3B GO_process: GO:0000272 - polysaccharide catabolic process;codon_start=1;transl_table=11;product=alpha amylase catalytic domain family protein;protein_id=AAC74391.2;db_xref=GI:87081873;db_xref=ASAP:ABE-0004400;db_xref=UniProtKB/Swiss-Prot:P76041;db_xref=EcoGene:EG13910 EMBL gene 1371909 1373201 . + . ID=.2853;gene=ycjN;locus_tag=b1310;gene_synonym=ECK1305;gene_synonym=JW1303;db_xref=EcoGene:EG13911 EMBL CDS 1371909 1373201 . + 0 ID=.2854;gene=ycjN;locus_tag=b1310;gene_synonym=ECK1305;gene_synonym=JW1303;function=putative transport%3B Not classified;note=GO_component: GO:0042597 - periplasmic space;codon_start=1;transl_table=11;product=putative ABC sugar transporter periplasmic binding protein;protein_id=AAC74392.1;db_xref=GI:1787569;db_xref=ASAP:ABE-0004402;db_xref=UniProtKB/Swiss-Prot:P76042;db_xref=EcoGene:EG13911 EMBL gene 1373222 1374103 . + . ID=.2855;gene=ycjO;locus_tag=b1311;gene_synonym=ECK1306;gene_synonym=JW1304;db_xref=EcoGene:EG13912 EMBL CDS 1373222 1374103 . + 0 ID=.2856;gene=ycjO;locus_tag=b1311;gene_synonym=ECK1306;gene_synonym=JW1304;function=putative transport%3B Not classified;note=putative binding-protein dependent transport protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative sugar ABC transporter permease;protein_id=AAC74393.1;db_xref=GI:1787570;db_xref=ASAP:ABE-0004405;db_xref=UniProtKB/Swiss-Prot:P0AFR7;db_xref=EcoGene:EG13912 EMBL gene 1374090 1374932 . + . ID=.2857;gene=ycjP;locus_tag=b1312;gene_synonym=ECK1307;gene_synonym=JW1305;db_xref=EcoGene:EG13913 EMBL CDS 1374090 1374932 . + 0 ID=.2858;gene=ycjP;locus_tag=b1312;gene_synonym=ECK1307;gene_synonym=JW1305;function=putative transport%3B Not classified;note=putative transport system permease protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative sugar ABC transporter permease;protein_id=AAC74394.1;db_xref=GI:1787571;db_xref=ASAP:ABE-0004409;db_xref=UniProtKB/Swiss-Prot:P77716;db_xref=EcoGene:EG13913 EMBL gene 1374963 1376015 . + . ID=.2859;gene=ycjQ;locus_tag=b1313;gene_synonym=ECK1308;gene_synonym=JW1306;db_xref=EcoGene:EG13914 EMBL CDS 1374963 1376015 . + 0 ID=.2860;gene=ycjQ;locus_tag=b1313;gene_synonym=ECK1308;gene_synonym=JW1306;function=putative enzyme%3B Not classified;note=putative oxidoreductase;codon_start=1;transl_table=11;product=putative Zn-dependent NAD(P)-binding oxidoreductase;protein_id=AAC74395.1;db_xref=GI:1787572;db_xref=ASAP:ABE-0004412;db_xref=UniProtKB/Swiss-Prot:P76043;db_xref=EcoGene:EG13914 EMBL gene 1376034 1376822 . + . ID=.2861;gene=ycjR;locus_tag=b1314;gene_synonym=ECK1309;gene_synonym=JW5202;db_xref=EcoGene:EG13915 EMBL CDS 1376034 1376822 . + 0 ID=.2862;gene=ycjR;locus_tag=b1314;gene_synonym=ECK1309;gene_synonym=JW5202;function=putative factor%3B Not classified;codon_start=1;transl_table=11;product=putative TIM alpha/beta barrel enzyme;protein_id=AAC74396.2;db_xref=GI:87081874;db_xref=ASAP:ABE-0004414;db_xref=UniProtKB/Swiss-Prot:P76044;db_xref=EcoGene:EG13915 EMBL gene 1376832 1377887 . + . ID=.2863;gene=ycjS;locus_tag=b1315;gene_synonym=ECK1310;gene_synonym=JW1308;db_xref=EcoGene:EG13916 EMBL CDS 1376832 1377887 . + 0 ID=.2864;gene=ycjS;locus_tag=b1315;gene_synonym=ECK1310;gene_synonym=JW1308;function=putative enzyme%3B Not classified;note=putative dehydrogenase;codon_start=1;transl_table=11;product=putative NADH-binding oxidoreductase;protein_id=AAC74397.1;db_xref=GI:1787574;db_xref=ASAP:ABE-0004416;db_xref=UniProtKB/Swiss-Prot:P77503;db_xref=EcoGene:EG13916 EMBL gene 1377884 1380151 . + . ID=.2865;gene=ycjT;locus_tag=b1316;gene_synonym=ECK1311;gene_synonym=JW1309;db_xref=EcoGene:EG13917 EMBL CDS 1377884 1380151 . + 0 ID=.2866;gene=ycjT;locus_tag=b1316;gene_synonym=ECK1311;gene_synonym=JW1309;codon_start=1;transl_table=11;product=putative family 65 glycosyl hydrolase;protein_id=AAC74398.1;db_xref=GI:1787575;db_xref=ASAP:ABE-0004418;db_xref=UniProtKB/Swiss-Prot:P77154;db_xref=EcoGene:EG13917 EMBL gene 1380148 1380807 . + . ID=.2867;gene=ycjU;locus_tag=b1317;gene_synonym=ECK1312;gene_synonym=JW1310;db_xref=EcoGene:EG13918 EMBL CDS 1380148 1380807 . + 0 ID=.2868;gene=ycjU;locus_tag=b1317;gene_synonym=ECK1312;gene_synonym=JW1310;function=enzyme%3B Not classified;note=putative beta-phosphoglucomutase;codon_start=1;transl_table=11;product=beta-phosphoglucomutase;protein_id=AAC74399.1;db_xref=GI:1787576;db_xref=ASAP:ABE-0004420;db_xref=UniProtKB/Swiss-Prot:P77366;db_xref=EcoGene:EG13918 EMBL gene 1380821 1381902 . + . ID=.2869;gene=ycjV;locus_tag=b4524;gene_synonym=ECK1313;gene_synonym=JW1311;gene_synonym=ymjB;pseudo=true;db_xref=EcoGene:EG13919 EMBL biological_region 1380821 1381902 . + 0 ID=.2870;featflags=type:CDS;gene=ycjV;locus_tag=b4524;gene_synonym=ECK1313;gene_synonym=JW1311;gene_synonym=ymjB;note=pseudogene%3B putative ATP-binding component of a transport system%3B GO_component: GO:0005737 - cytoplasm;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0004422;db_xref=ASAP:ABE-0285045;db_xref=UniProtKB/Swiss-Prot:P77481;db_xref=EcoGene:EG13919 EMBL CDS 1380821 1381777 . + 0 Parent=.2870 EMBL CDS 1381777 1381902 . + 0 Parent=.2870 EMBL gene 1381947 1382852 . + . ID=.2873;gene=ompG;locus_tag=b1319;gene_synonym=ECK1315;gene_synonym=JW1312;db_xref=EcoGene:EG13428 EMBL CDS 1381947 1382852 . + 0 ID=.2874;gene=ompG;locus_tag=b1319;gene_synonym=ECK1315;gene_synonym=JW1312;function=membrane%3B Outer membrane constituents;note=outer membrane protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane;codon_start=1;transl_table=11;product=outer membrane porin G;protein_id=AAC74401.1;db_xref=GI:1787579;db_xref=ASAP:ABE-0004425;db_xref=UniProtKB/Swiss-Prot:P76045;db_xref=EcoGene:EG13428 EMBL repeat_region 1382867 1382940 . + . ID=.2875;note=REP113 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 1382963 1383961 . - . ID=.2876;gene=ycjW;locus_tag=b1320;gene_synonym=ECK1316;gene_synonym=JW1313;db_xref=EcoGene:EG13920 EMBL CDS 1382963 1383961 . - 0 ID=.2877;gene=ycjW;locus_tag=b1320;gene_synonym=ECK1316;gene_synonym=JW1313;function=putative regulator%3B Not classified;note=putative LACI-type transcriptional regulator%3B GO_component: GO:0042597 - periplasmic space%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=LacI family putative transcriptional repressor;protein_id=AAC74402.1;db_xref=GI:1787580;db_xref=ASAP:ABE-0004428;db_xref=UniProtKB/Swiss-Prot:P77615;db_xref=EcoGene:EG13920 EMBL gene 1384117 1385514 . + . ID=.2878;gene=ycjX;locus_tag=b1321;gene_synonym=ECK1317;gene_synonym=JW1314;db_xref=EcoGene:EG13921 EMBL CDS 1384117 1385514 . + 0 ID=.2879;gene=ycjX;locus_tag=b1321;gene_synonym=ECK1317;gene_synonym=JW1314;function=putative enzyme%3B Not classified;note=putative EC 2.1 enzymes;codon_start=1;transl_table=11;product=DUF463 family protein%2C puatative P-loop NTPase;protein_id=AAC74403.1;db_xref=GI:1787581;db_xref=ASAP:ABE-0004433;db_xref=UniProtKB/Swiss-Prot:P76046;db_xref=EcoGene:EG13921 EMBL gene 1385511 1386572 . + . ID=.2880;gene=ycjF;locus_tag=b1322;gene_synonym=ECK1318;gene_synonym=JW1315;db_xref=EcoGene:EG12870 EMBL CDS 1385511 1386572 . + 0 ID=.2881;gene=ycjF;locus_tag=b1322;gene_synonym=ECK1318;gene_synonym=JW1315;codon_start=1;transl_table=11;product=UPF0283 family inner membrane protein;protein_id=AAC74404.1;db_xref=GI:1787582;db_xref=ASAP:ABE-0004436;db_xref=UniProtKB/Swiss-Prot:P0A8R7;db_xref=EcoGene:EG12870 EMBL gene 1386720 1388261 . + . ID=.2882;gene=tyrR;locus_tag=b1323;gene_synonym=ECK1319;gene_synonym=JW1316;db_xref=EcoGene:EG11042 EMBL CDS 1386720 1388261 . + 0 ID=.2883;gene=tyrR;locus_tag=b1323;gene_synonym=ECK1319;gene_synonym=JW1316;function=regulator%3B Transport of small molecules: Amino acids%2C amines;experiment=N-terminus verified by Edman degradation: PMID 8444880;note=transcriptional regulation of aroF%2C aroG%2C tyrA and aromatic amino acid transport%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=aromatic amino acid biosynthesis and transport regulon transcriptional regulator%3B autorepressor%3B ATPase%3B phosphatase;protein_id=AAC74405.1;db_xref=GI:1787583;db_xref=ASAP:ABE-0004440;db_xref=UniProtKB/Swiss-Prot:P07604;db_xref=EcoGene:EG11042 EMBL repeat_region 1388272 1388296 . + . ID=.2884;note=REP114 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 1388305 1388811 . - . ID=.2885;gene=tpx;locus_tag=b1324;gene_synonym=ECK1320;gene_synonym=JW1317;gene_synonym=yzzJ;db_xref=EcoGene:EG12672 EMBL CDS 1388305 1388811 . - 0 ID=.2886;gene=tpx;locus_tag=b1324;gene_synonym=ECK1320;gene_synonym=JW1317;gene_synonym=yzzJ;ec_number=1.11.1.-;function=enzyme%3B Detoxification;note=thiol peroxidase%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0006805 - xenobiotic metabolic process;codon_start=1;transl_table=11;product=lipid hydroperoxide peroxidase;protein_id=AAC74406.1;db_xref=GI:1787584;db_xref=ASAP:ABE-0004442;db_xref=UniProtKB/Swiss-Prot:P0A862;db_xref=EcoGene:EG12672 EMBL gene 1388930 1389895 . + . ID=.2887;gene=ycjG;locus_tag=b1325;gene_synonym=ECK1321;gene_synonym=JW1318;gene_synonym=ycjH;db_xref=EcoGene:EG13228 EMBL CDS 1388930 1389895 . + 0 ID=.2888;gene=ycjG;locus_tag=b1325;gene_synonym=ECK1321;gene_synonym=JW1318;gene_synonym=ycjH;function=putative enzyme%3B Not classified;note=putative muconate cycloisomerase I;codon_start=1;transl_table=11;product=L-Ala-D/L-Glu epimerase;protein_id=AAC74407.2;db_xref=GI:87081876;db_xref=ASAP:ABE-0004448;db_xref=UniProtKB/Swiss-Prot:P51981;db_xref=EcoGene:EG13228 EMBL gene 1389870 1390598 . - . ID=.2889;gene=mpaA;locus_tag=b1326;gene_synonym=ECK1322;gene_synonym=JW1319;gene_synonym=ycjI;db_xref=EcoGene:EG13906 EMBL CDS 1389870 1390598 . - 0 ID=.2890;gene=mpaA;locus_tag=b1326;gene_synonym=ECK1322;gene_synonym=JW1319;gene_synonym=ycjI;function=enzyme%3B Not classified;note=putative carboxypeptidase;codon_start=1;transl_table=11;product=murein peptide amidase A;protein_id=AAC74408.2;db_xref=GI:226510938;db_xref=ASAP:ABE-0004450;db_xref=UniProtKB/Swiss-Prot:P0ACV6;db_xref=EcoGene:EG13906 EMBL gene 1390725 1390862 . - . ID=.2891;gene=ymjC;locus_tag=b4525;gene_synonym=ECK1323;gene_synonym=JW5960;pseudo=true;db_xref=EcoGene:EG14420 EMBL CDS 1390725 1390862 . - 0 ID=.2892;gene=ymjC;locus_tag=b4525;gene_synonym=ECK1323;gene_synonym=JW5960;note=pseudogene;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0285046;db_xref=UniProtKB/Swiss-Prot:Q2EER5;db_xref=EcoGene:EG14420 EMBL gene 1390868 1390933 . - . ID=.2893;gene=ymjD;locus_tag=b4673;gene_synonym=ECK4488;pseudo=true;db_xref=EcoGene:EG14478 EMBL CDS 1390868 1390933 . - 0 ID=.2894;gene=ymjD;locus_tag=b4673;gene_synonym=ECK4488;note=pseudogene fragment%2C MhpC family;pseudo=true;codon_start=1;transl_table=11;db_xref=UniProtKB/Swiss-Prot:P0CD93;db_xref=EcoGene:EG14478 EMBL gene 1390933 1391853 . - . ID=.2895;gene=ycjY;locus_tag=b1327;gene_synonym=ECK1324;gene_synonym=JW5804;db_xref=EcoGene:EG13922 EMBL CDS 1390933 1391853 . - 0 ID=.2896;gene=ycjY;locus_tag=b1327;gene_synonym=ECK1324;gene_synonym=JW5804;codon_start=1;transl_table=11;product=S9 homolog non-peptidase family protein;protein_id=AAC74409.2;db_xref=GI:221142683;db_xref=ASAP:ABE-0004453;db_xref=UniProtKB/Swiss-Prot:P76049;db_xref=EcoGene:EG13922 EMBL gene 1391991 1392890 . + . ID=.2897;gene=pgrR;locus_tag=b1328;gene_synonym=ECK1325;gene_synonym=JW1321;gene_synonym=ycjZ;db_xref=EcoGene:EG13923 EMBL CDS 1391991 1392890 . + 0 ID=.2898;gene=pgrR;locus_tag=b1328;gene_synonym=ECK1325;gene_synonym=JW1321;gene_synonym=ycjZ;function=regulator%3B Not classified;note=putative transcriptional regulator LYSR-type%3B GO_function: GO:0016563 - transcription activator activity%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=murein peptide degradation regulator;protein_id=AAC74410.1;db_xref=GI:1787589;db_xref=ASAP:ABE-0004457;db_xref=UniProtKB/Swiss-Prot:P77333;db_xref=EcoGene:EG13923 EMBL gene 1393227 1394840 . + . ID=.2899;gene=mppA;locus_tag=b1329;gene_synonym=ECK1326;gene_synonym=JW1322;gene_synonym=ynaH;db_xref=EcoGene:EG13376 EMBL CDS 1393227 1394840 . + 0 ID=.2900;gene=mppA;locus_tag=b1329;gene_synonym=ECK1326;gene_synonym=JW1322;gene_synonym=ynaH;function=transport%3B Not classified;note=periplasmic-binding component of ABC superfamily%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0000270 - peptidoglycan metabolic process;codon_start=1;transl_table=11;product=murein tripeptide (L-ala-gamma-D-glutamyl-meso-DAP) transporter subunit;protein_id=AAC74411.2;db_xref=GI:87081878;db_xref=ASAP:ABE-0004460;db_xref=UniProtKB/Swiss-Prot:P77348;db_xref=EcoGene:EG13376 EMBL gene 1394891 1395922 . - . ID=.2901;gene=ynaI;locus_tag=b1330;gene_synonym=ECK1327;gene_synonym=JW1323;db_xref=EcoGene:EG13924 EMBL CDS 1394891 1395922 . - 0 ID=.2902;gene=ynaI;locus_tag=b1330;gene_synonym=ECK1327;gene_synonym=JW1323;note=GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=mechanosensitive channel protein%2C very small conductance;protein_id=AAC74412.1;db_xref=GI:1787591;db_xref=ASAP:ABE-0004462;db_xref=UniProtKB/Swiss-Prot:P0AEB5;db_xref=EcoGene:EG13924 EMBL sequence_feature 1396044 1397238 . + . ID=.2903;note=*mobile_element_type: insertion sequence:IS5F EMBL gene 1396076 1397092 . + . ID=.2904;gene=insH1;locus_tag=b1331;gene_synonym=ECK0261;db_xref=EcoGene:EG40008 EMBL CDS 1396076 1397092 . + 0 ID=.2905;gene=insH1;locus_tag=b1331;gene_synonym=ECK0261;function=IS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;codon_start=1;transl_table=11;product=IS5 transposase and trans-activator;protein_id=AAC74413.1;db_xref=GI:1787592;db_xref=ASAP:ABE-0004467;db_xref=UniProtKB/Swiss-Prot:P0CE52;db_xref=EcoGene:EG40008 EMBL gene 1397365 1397622 . + . ID=.2906;gene=ynaJ;locus_tag=b1332;gene_synonym=ECK1328;gene_synonym=JW1326;db_xref=EcoGene:EG14294 EMBL CDS 1397365 1397622 . + 0 ID=.2907;gene=ynaJ;locus_tag=b1332;gene_synonym=ECK1328;gene_synonym=JW1326;codon_start=1;transl_table=11;product=DUF2534 family putative inner membrane protein;protein_id=AAC74414.1;db_xref=GI:1787593;db_xref=ASAP:ABE-0004470;db_xref=UniProtKB/Swiss-Prot:P64445;db_xref=EcoGene:EG14294 EMBL gene 1397672 1398622 . - . ID=.2908;gene=uspE;locus_tag=b1333;gene_synonym=ECK1329;gene_synonym=JW1327;gene_synonym=ydaA;db_xref=EcoGene:EG11246 EMBL CDS 1397672 1398622 . - 0 ID=.2909;gene=uspE;locus_tag=b1333;gene_synonym=ECK1329;gene_synonym=JW1327;gene_synonym=ydaA;codon_start=1;transl_table=11;product=stress-induced protein;protein_id=AAC74415.1;db_xref=GI:1787594;db_xref=ASAP:ABE-0004472;db_xref=UniProtKB/Swiss-Prot:P0AAC0;db_xref=EcoGene:EG11246 EMBL gene 1398774 1399526 . - . ID=.2910;gene=fnr;locus_tag=b1334;gene_synonym=ECK1330;gene_synonym=JW1328;gene_synonym=nirA;gene_synonym=nirR;gene_synonym=ossA;db_xref=EcoGene:EG10325 EMBL CDS 1398774 1399526 . - 0 ID=.2911;gene=fnr;locus_tag=b1334;gene_synonym=ECK1330;gene_synonym=JW1328;gene_synonym=nirA;gene_synonym=nirR;gene_synonym=ossA;function=regulator%3B Global regulatory functions;experiment=N-terminus verified by Edman degradation: PMID 2181237;note=transcriptional regulation of aerobic%2C anaerobic respiration%2C osmotic balance%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=oxygen-sensing anaerobic growth regulon transcriptional regulator FNR%3B autorepressor;protein_id=AAC74416.1;db_xref=GI:1787595;db_xref=ASAP:ABE-0004475;db_xref=UniProtKB/Swiss-Prot:P0A9E5;db_xref=EcoGene:EG10325 EMBL gene 1399721 1400236 . - . ID=.2912;gene=ogt;locus_tag=b1335;gene_synonym=ECK1331;gene_synonym=JW1329;db_xref=EcoGene:EG10668 EMBL CDS 1399721 1400236 . - 0 ID=.2913;gene=ogt;locus_tag=b1335;gene_synonym=ECK1331;gene_synonym=JW1329;ec_number=2.1.1.63;function=enzyme%3B DNA - replication%2C repair%2C restriction/modification;experiment=N-terminus verified by Edman degradation: PMID 2825131;note=O-6-alkylguanine-DNA/cysteine-protein methyltransferase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006306 - DNA methylation;codon_start=1;transl_table=11;product=O-6-alkylguanine-DNA:cysteine-protein methyltransferase;protein_id=AAC74417.1;db_xref=GI:1787596;db_xref=ASAP:ABE-0004486;db_xref=UniProtKB/Swiss-Prot:P0AFH0;db_xref=EcoGene:EG10668 EMBL gene 1400247 1401773 . - . ID=.2914;gene=abgT;locus_tag=b1336;gene_synonym=ECK1332;gene_synonym=JW5822;gene_synonym=ydaH;db_xref=EcoGene:EG12853 EMBL CDS 1400247 1401773 . - 0 ID=.2915;gene=abgT;locus_tag=b1336;gene_synonym=ECK1332;gene_synonym=JW5822;gene_synonym=ydaH;function=putative transport%3B Not classified;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=p-aminobenzoyl-glutamate transporter%3B membrane protein;protein_id=AAC74418.2;db_xref=GI:87081879;db_xref=ASAP:ABE-0004488;db_xref=UniProtKB/Swiss-Prot:P46133;db_xref=EcoGene:EG12853 EMBL gene 1401810 1403255 . - . ID=.2916;gene=abgB;locus_tag=b1337;gene_synonym=ECK1333;gene_synonym=JW1331;gene_synonym=ydaI;db_xref=EcoGene:EG13351 EMBL CDS 1401810 1403255 . - 0 ID=.2917;gene=abgB;locus_tag=b1337;gene_synonym=ECK1333;gene_synonym=JW1331;gene_synonym=ydaI;function=enzyme%3B Degradation of small molecules: Carbon compounds;experiment=N-terminus verified by Edman degradation: PMID 20190044;note=GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=p-aminobenzoyl-glutamate hydrolase%2C B subunit;protein_id=AAC74419.1;db_xref=GI:1787598;db_xref=ASAP:ABE-0004491;db_xref=UniProtKB/Swiss-Prot:P76052;db_xref=EcoGene:EG13351 EMBL gene 1403255 1404565 . - . ID=.2918;gene=abgA;locus_tag=b1338;gene_synonym=ECK1334;gene_synonym=JW5205;gene_synonym=ydaJ;db_xref=EcoGene:EG13352 EMBL CDS 1403255 1404565 . - 0 ID=.2919;gene=abgA;locus_tag=b1338;gene_synonym=ECK1334;gene_synonym=JW5205;gene_synonym=ydaJ;ec_number=3.5.1.14;function=enzyme%3B Degradation of small molecules: Carbon compounds;experiment=N-terminus verified by Edman degradation: PMID 20190044;note=GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=p-aminobenzoyl-glutamate hydrolase%2C A subunit;protein_id=AAC74420.2;db_xref=GI:87081880;db_xref=ASAP:ABE-0004493;db_xref=UniProtKB/Swiss-Prot:P77357;db_xref=EcoGene:EG13352 EMBL gene 1404741 1405649 . + . ID=.2920;gene=abgR;locus_tag=b1339;gene_synonym=ECK1335;gene_synonym=JW1333;gene_synonym=ydaK;db_xref=EcoGene:EG13353 EMBL CDS 1404741 1405649 . + 0 ID=.2921;gene=abgR;locus_tag=b1339;gene_synonym=ECK1335;gene_synonym=JW1333;gene_synonym=ydaK;function=putative regulator%3B Not classified;note=putative transcriptional regulator LYSR-type%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=putative DNA-binding transcriptional regulator of abgABT operon;protein_id=AAC74421.1;db_xref=GI:1787601;db_xref=ASAP:ABE-0004496;db_xref=UniProtKB/Swiss-Prot:P77744;db_xref=EcoGene:EG13353 EMBL gene 1405656 1405751 . - . ID=.2922;gene=mcaS;locus_tag=b4426;gene_synonym=ECK1336;gene_synonym=IS061;gene_synonym=isrA;gene_synonym=JWR0233;db_xref=EcoGene:EG31143 EMBL ncRNA 1405656 1405751 . - . ID=.2923;ncrna_class=antisense_RNA;gene=mcaS;locus_tag=b4426;gene_synonym=ECK1336;gene_synonym=IS061;gene_synonym=isrA;gene_synonym=JWR0233;product=motility and biofilm regulator sRNA;note=identified in a large scale screen;function=represses csgD%2C activates flhD%2C regulates pgaA;db_xref=ASAP:ABE-0047247;db_xref=EcoGene:EG31143 EMBL gene 1405979 1406542 . + . ID=.2924;gene=smrA;locus_tag=b1340;gene_synonym=ECK1337;gene_synonym=JW1334;gene_synonym=ydaL;db_xref=EcoGene:EG13354 EMBL CDS 1405979 1406542 . + 0 ID=.2925;gene=smrA;locus_tag=b1340;gene_synonym=ECK1337;gene_synonym=JW1334;gene_synonym=ydaL;codon_start=1;transl_table=11;product=DNA endonuclease;protein_id=AAC74422.1;db_xref=GI:1787602;db_xref=ASAP:ABE-0004502;db_xref=UniProtKB/Swiss-Prot:P76053;db_xref=EcoGene:EG13354 EMBL gene 1406563 1407795 . - . ID=.2926;gene=ydaM;locus_tag=b1341;gene_synonym=ECK1338;gene_synonym=JW5206;db_xref=EcoGene:EG13355 EMBL CDS 1406563 1407795 . - 0 ID=.2927;gene=ydaM;locus_tag=b1341;gene_synonym=ECK1338;gene_synonym=JW5206;codon_start=1;transl_table=11;product=diguanylate cyclase%2C csgD regulator;protein_id=AAC74423.2;db_xref=GI:87081881;db_xref=ASAP:ABE-0004504;db_xref=UniProtKB/Swiss-Prot:P77302;db_xref=EcoGene:EG13355 EMBL gene 1408050 1409033 . + . ID=.2928;gene=ydaN;locus_tag=b1342;gene_synonym=ECK1339;gene_synonym=JW1336;gene_synonym=zntB;db_xref=EcoGene:EG13356 EMBL CDS 1408050 1409033 . + 0 ID=.2929;gene=ydaN;locus_tag=b1342;gene_synonym=ECK1339;gene_synonym=JW1336;gene_synonym=zntB;codon_start=1;transl_table=11;product=putative Zn(II) transporter;protein_id=AAC74424.1;db_xref=GI:1787604;db_xref=ASAP:ABE-0004508;db_xref=UniProtKB/Swiss-Prot:P64423;db_xref=EcoGene:EG13356 EMBL gene 1409129 1409250 . + . ID=.2930;gene=fnrS;locus_tag=b4699;gene_synonym=ECK4511;gene_synonym=rydA;db_xref=EcoGene:EG31185 EMBL ncRNA 1409129 1409250 . + . ID=.2931;ncrna_class=antisense_RNA;gene=fnrS;locus_tag=b4699;gene_synonym=ECK4511;gene_synonym=rydA;product=FNR-activated anaerobic sRNA antisense regulator down regulates cydDC%2C metE%2C sodA%2C sodB%2C Hfq-dependent%3B mediates negative FNR regulation;db_xref=ASAP:ABE-0285265;db_xref=EcoGene:EG31185 EMBL gene 1409511 1410884 . + . ID=.2932;gene=dbpA;locus_tag=b1343;gene_synonym=ECK1340;gene_synonym=JW1337;gene_synonym=rhlC;db_xref=EcoGene:EG10210 EMBL CDS 1409511 1410884 . + 0 ID=.2933;gene=dbpA;locus_tag=b1343;gene_synonym=ECK1340;gene_synonym=JW1337;gene_synonym=rhlC;function=enzyme%3B RNA synthesis%2C modification%2C DNA transcription;note=ATP-dependent RNA helicase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009451 - RNA modification;codon_start=1;transl_table=11;product=ATP-dependent RNA helicase%2C specific for 23S rRNA;protein_id=AAC74425.1;db_xref=GI:1787605;db_xref=ASAP:ABE-0004511;db_xref=UniProtKB/Swiss-Prot:P21693;db_xref=EcoGene:EG10210 EMBL repeat_region 1410933 1410969 . + . ID=.2934;note=REP115 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 1411013 1411948 . - . ID=.2935;gene=ttcA;locus_tag=b1344;gene_synonym=ECK1341;gene_synonym=JW1338;gene_synonym=stcA;gene_synonym=ydaO;db_xref=EcoGene:EG13357 EMBL CDS 1411013 1411948 . - 0 ID=.2936;gene=ttcA;locus_tag=b1344;gene_synonym=ECK1341;gene_synonym=JW1338;gene_synonym=stcA;gene_synonym=ydaO;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=tRNA s(2)C32 thioltransferase%2C iron sulfur cluster protein;protein_id=AAC74426.1;db_xref=GI:1787606;db_xref=ASAP:ABE-0004514;db_xref=UniProtKB/Swiss-Prot:P76055;db_xref=EcoGene:EG13357 EMBL sequence_feature 1411899 1434958 . + . ID=.2937;note=cryptic prophage Rac EMBL gene 1412000 1413235 . - . ID=.2938;gene=intR;locus_tag=b1345;gene_synonym=ECK1342;gene_synonym=JW1339;gene_synonym=ydaP;db_xref=EcoGene:EG13358 EMBL CDS 1412000 1413235 . - 0 ID=.2939;gene=intR;locus_tag=b1345;gene_synonym=ECK1342;gene_synonym=JW1339;gene_synonym=ydaP;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=Rac prophage%3B integrase;protein_id=AAC74427.1;db_xref=GI:1787607;db_xref=ASAP:ABE-0004517;db_xref=UniProtKB/Swiss-Prot:P76056;db_xref=EcoGene:EG13358 EMBL gene 1413237 1413452 . - . ID=.2940;gene=ydaQ;locus_tag=b1346;gene_synonym=ECK1343;gene_synonym=JW5207;db_xref=EcoGene:EG13359 EMBL CDS 1413237 1413452 . - 0 ID=.2941;gene=ydaQ;locus_tag=b1346;gene_synonym=ECK1343;gene_synonym=JW5207;function=Phage or Prophage Related;note=putative lambdoid prophage Rac excisionase;codon_start=1;transl_table=11;product=Rac prophage%3B conserved protein;protein_id=AAC74428.2;db_xref=GI:87081882;db_xref=ASAP:ABE-0004519;db_xref=UniProtKB/Swiss-Prot:P76057;db_xref=EcoGene:EG13359 EMBL gene 1413531 1413740 . - . ID=.2942;gene=ydaC;locus_tag=b1347;gene_synonym=ECK1344;gene_synonym=JW1341;gene_synonym=rcbA;db_xref=EcoGene:EG11901 EMBL CDS 1413531 1413740 . - 0 ID=.2943;gene=ydaC;locus_tag=b1347;gene_synonym=ECK1344;gene_synonym=JW1341;gene_synonym=rcbA;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=DUF1187 family protein%2C Rac prophage%3B putative double-strand break reduction protein;protein_id=AAC74429.1;db_xref=GI:1787609;db_xref=ASAP:ABE-0004522;db_xref=UniProtKB/Swiss-Prot:P33230;db_xref=EcoGene:EG11901 EMBL gene 1413556 1413734 . + . ID=.2944;gene=ralA;locus_tag=b4714;gene_synonym=ECK4571;gene_synonym=rcbA;note=Antisense sRNA antitoxin for the RalR toxin;db_xref=EcoGene:EG31192 EMBL gene 1413733 1413927 . - . ID=.2945;gene=ralR;locus_tag=b1348;gene_synonym=ECK1345;gene_synonym=JW5208;gene_synonym=lar;gene_synonym=ral;gene_synonym=ydaB;db_xref=EcoGene:EG11900 EMBL CDS 1413733 1413927 . - 0 ID=.2946;gene=ralR;locus_tag=b1348;gene_synonym=ECK1345;gene_synonym=JW5208;gene_synonym=lar;gene_synonym=ral;gene_synonym=ydaB;function=enzyme%3B Phage or Prophage Related;note=restriction alleviation and modification enhancement;codon_start=1;transl_table=11;product=Rac prophage%3B restriction alleviation protein;protein_id=AAC74430.1;db_xref=GI:1787610;db_xref=ASAP:ABE-0004524;db_xref=UniProtKB/Swiss-Prot:P33229;db_xref=EcoGene:EG11900 EMBL gene 1413984 1414793 . - . ID=.2947;gene=recT;locus_tag=b1349;gene_synonym=ECK1346;gene_synonym=JW1343;db_xref=EcoGene:EG11899 EMBL CDS 1413984 1414793 . - 0 ID=.2948;gene=recT;locus_tag=b1349;gene_synonym=ECK1346;gene_synonym=JW1343;function=enzyme%3B DNA - replication%2C repair%2C restriction/modification: Phage or Prophage Related;experiment=N-terminus verified by Edman degradation: PMID 8416902;note=recombinase%2C DNA renaturation;codon_start=1;transl_table=11;product=Rac prophage%3B recombination and repair protein;protein_id=AAC74431.1;db_xref=GI:1787611;db_xref=ASAP:ABE-0004529;db_xref=UniProtKB/Swiss-Prot:P33228;db_xref=EcoGene:EG11899 EMBL gene 1414786 1417386 . - . ID=.2949;gene=recE;locus_tag=b1350;gene_synonym=ECK1347;gene_synonym=JW1344;gene_synonym=rmuB;gene_synonym=sbcA;db_xref=EcoGene:EG10827 EMBL CDS 1414786 1417386 . - 0 ID=.2950;gene=recE;locus_tag=b1350;gene_synonym=ECK1347;gene_synonym=JW1344;gene_synonym=rmuB;gene_synonym=sbcA;ec_number=3.1.11.-;function=enzyme%3B Degradation of DNA%3B Phage or Prophage Related;note=exonuclease VIII%2C ds DNA exonuclease%2C 5' --> 3' specific%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006308 - DNA catabolic process%3B GO_process: GO:0006281 - DNA repair;codon_start=1;transl_table=11;product=Rac prophage%3B exonuclease VIII%2C 5' to 3' specific dsDNA exonuclease;protein_id=AAC74432.1;db_xref=GI:1787612;db_xref=ASAP:ABE-0004531;db_xref=UniProtKB/Swiss-Prot:P15032;db_xref=EcoGene:EG10827 EMBL gene 1417488 1417763 . - . ID=.2951;gene=racC;locus_tag=b1351;gene_synonym=ECK1348;gene_synonym=JW1345;gene_synonym=sbcA;db_xref=EcoGene:EG10813 EMBL CDS 1417488 1417763 . - 0 ID=.2952;gene=racC;locus_tag=b1351;gene_synonym=ECK1348;gene_synonym=JW1345;gene_synonym=sbcA;function=membrane%3B Phage or Prophage Related;experiment=N-terminus verified by Edman degradation: PMID 3056915;note=RacC protein;codon_start=1;transl_table=11;product=Rac prophage%3B uncharacterized protein;protein_id=AAC74433.1;db_xref=GI:1787614;db_xref=ASAP:ABE-0004533;db_xref=UniProtKB/Swiss-Prot:P15033;db_xref=EcoGene:EG10813 EMBL gene 1417838 1418008 . - . ID=.2953;gene=ydaE;locus_tag=b4526;gene_synonym=ECK1349;gene_synonym=JW1346;db_xref=EcoGene:EG12156 EMBL CDS 1417838 1418008 . - 0 ID=.2954;gene=ydaE;locus_tag=b4526;gene_synonym=ECK1349;gene_synonym=JW1346;function=Phage or Prophage Related;note=GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=conserved protein%2C Rac prophage;protein_id=ABD18659.1;db_xref=GI:87081883;db_xref=ASAP:ABE-0285047;db_xref=UniProtKB/Swiss-Prot:P38394;db_xref=EcoGene:EG12156 EMBL gene 1418008 1418229 . - . ID=.2955;gene=kilR;locus_tag=b1352;gene_synonym=ECK1350;gene_synonym=JW1347;gene_synonym=kil;gene_synonym=ydaD;db_xref=EcoGene:EG12155 EMBL CDS 1418008 1418229 . - 0 ID=.2956;gene=kilR;locus_tag=b1352;gene_synonym=ECK1350;gene_synonym=JW1347;gene_synonym=kil;gene_synonym=ydaD;function=Phage or Prophage Related;note=Kil protein (killing function) of lambdoid prophage Rac;codon_start=1;transl_table=11;product=killing protein%2C Rac prophage%3B FtsZ inhibitor protein;protein_id=AAC74434.2;db_xref=GI:87081884;db_xref=ASAP:ABE-0004537;db_xref=UniProtKB/Swiss-Prot:P38393;db_xref=EcoGene:EG12155 EMBL gene 1418671 1419159 . + . ID=.2957;gene=sieB;locus_tag=b1353;gene_synonym=ECK1351;gene_synonym=git;gene_synonym=JW5209;db_xref=EcoGene:EG12154 EMBL CDS 1418671 1419159 . + 0 ID=.2958;gene=sieB;locus_tag=b1353;gene_synonym=ECK1351;gene_synonym=git;gene_synonym=JW5209;function=phenotype%3B Phage or Prophage Related;note=phage superinfection exclusion protein;codon_start=1;transl_table=11;product=phage superinfection exclusion protein%2C Rac prophage;protein_id=AAC74435.2;db_xref=GI:87081885;db_xref=ASAP:ABE-0004540;db_xref=UniProtKB/Swiss-Prot:P38392;db_xref=EcoGene:EG12154 EMBL gene 1419156 1419311 . - . ID=.2959;gene=ydaF;locus_tag=b4527;gene_synonym=ECK1352;gene_synonym=JW1349;db_xref=EcoGene:EG12157 EMBL CDS 1419156 1419311 . - 0 ID=.2960;gene=ydaF;locus_tag=b4527;gene_synonym=ECK1352;gene_synonym=JW1349;function=Phage or Prophage Related;note=GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=uncharacterized protein%2C Rac prophage;protein_id=AAC74436.2;db_xref=GI:87081886;db_xref=ASAP:ABE-0285048;db_xref=UniProtKB/Swiss-Prot:P0ACW0;db_xref=EcoGene:EG12157 EMBL gene 1419322 1419456 . - . ID=.2961;gene=ydaG;locus_tag=b1355;gene_synonym=ECK1353;gene_synonym=gatA;gene_synonym=JW5210;db_xref=EcoGene:EG12174 EMBL CDS 1419322 1419456 . - 0 ID=.2962;gene=ydaG;locus_tag=b1355;gene_synonym=ECK1353;gene_synonym=gatA;gene_synonym=JW5210;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=Rac prophage%3B uncharacterized protein;protein_id=AAC74437.2;db_xref=GI:87081887;db_xref=ASAP:ABE-0004544;db_xref=UniProtKB/Swiss-Prot:P76061;db_xref=EcoGene:EG12174 EMBL gene 1419765 1420241 . - . ID=.2963;gene=racR;locus_tag=b1356;gene_synonym=cohR;gene_synonym=ECK1354;gene_synonym=JW1351;gene_synonym=ydaR;db_xref=EcoGene:EG13360 EMBL CDS 1419765 1420241 . - 0 ID=.2964;gene=racR;locus_tag=b1356;gene_synonym=cohR;gene_synonym=ECK1354;gene_synonym=JW1351;gene_synonym=ydaR;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=Rac prophage%3B putative DNA-binding transcriptional regulator;protein_id=AAC74438.1;db_xref=GI:1787619;db_xref=ASAP:ABE-0004548;db_xref=UniProtKB/Swiss-Prot:P76062;db_xref=EcoGene:EG13360 EMBL gene 1420365 1420661 . + . ID=.2965;gene=ydaS;locus_tag=b1357;gene_synonym=ECK1355;gene_synonym=JW1352;db_xref=EcoGene:EG13361 EMBL CDS 1420365 1420661 . + 0 ID=.2966;gene=ydaS;locus_tag=b1357;gene_synonym=ECK1355;gene_synonym=JW1352;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=Rac prophage%3B putative DNA-binding transcriptional regulator;protein_id=AAC74439.1;db_xref=GI:1787620;db_xref=ASAP:ABE-0004552;db_xref=UniProtKB/Swiss-Prot:P76063;db_xref=EcoGene:EG13361 EMBL gene 1420684 1421106 . + . ID=.2967;gene=ydaT;locus_tag=b1358;gene_synonym=ECK1356;gene_synonym=JW1353;db_xref=EcoGene:EG13362 EMBL CDS 1420684 1421106 . + 0 ID=.2968;gene=ydaT;locus_tag=b1358;gene_synonym=ECK1356;gene_synonym=JW1353;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=Rac prophage%3B uncharacterized protein;protein_id=AAC74440.1;db_xref=GI:1787621;db_xref=ASAP:ABE-0004556;db_xref=UniProtKB/Swiss-Prot:P76064;db_xref=EcoGene:EG13362 EMBL gene 1421119 1421976 . + . ID=.2969;gene=ydaU;locus_tag=b1359;gene_synonym=ECK1357;gene_synonym=JW1354;db_xref=EcoGene:EG13363 EMBL CDS 1421119 1421976 . + 0 ID=.2970;gene=ydaU;locus_tag=b1359;gene_synonym=ECK1357;gene_synonym=JW1354;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=Rac prophage%3B conserved protein;protein_id=AAC74441.1;db_xref=GI:1787622;db_xref=ASAP:ABE-0004558;db_xref=UniProtKB/Swiss-Prot:P76065;db_xref=EcoGene:EG13363 EMBL gene 1421983 1422729 . + . ID=.2971;gene=ydaV;locus_tag=b1360;gene_synonym=ECK1358;gene_synonym=JW1355;db_xref=EcoGene:EG13364 EMBL CDS 1421983 1422729 . + 0 ID=.2972;gene=ydaV;locus_tag=b1360;gene_synonym=ECK1358;gene_synonym=JW1355;function=Phage or Prophage Related;note=putative DNA replication factor;codon_start=1;transl_table=11;product=Rac prophage%3B putative DNA replication protein;protein_id=AAC74442.1;db_xref=GI:1787623;db_xref=ASAP:ABE-0004560;db_xref=UniProtKB/Swiss-Prot:P77546;db_xref=EcoGene:EG13364 EMBL gene 1422701 1423200 . + . ID=.2973;gene=ydaW;locus_tag=b1361;gene_synonym=ECK1359;gene_synonym=JW5211;pseudo=true;db_xref=EcoGene:EG13365 EMBL CDS 1422701 1423200 . + 0 ID=.2974;gene=ydaW;locus_tag=b1361;gene_synonym=ECK1359;gene_synonym=JW5211;note=Rac prophage%3B pseudogene%2C DNA-binding protein family%3BPhage or Prophage Related;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0004562;db_xref=UniProtKB/Swiss-Prot:P76066;db_xref=EcoGene:EG13365 EMBL gene 1423201 1423644 . + . ID=.2975;gene=rzpR;locus_tag=b1362;gene_synonym=ECK1360;gene_synonym=JW5212;gene_synonym=Rz;gene_synonym=ydaX;pseudo=true;db_xref=EcoGene:EG13366 EMBL CDS 1423201 1423644 . + 0 ID=.2976;gene=rzpR;locus_tag=b1362;gene_synonym=ECK1360;gene_synonym=JW5212;gene_synonym=Rz;gene_synonym=ydaX;note=pseudogene%2C Rac prophage%3B Bacteriophage Rz lysis protein family%3BPhage or Prophage Related%3B putative Rac prophage endopeptidase%3B completely contained in another CDS;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0004564;db_xref=UniProtKB/Swiss-Prot:P77551;db_xref=EcoGene:EG13366 EMBL gene 1423400 1423585 . + . ID=.2977;gene=rzoR;locus_tag=b4528;gene_synonym=ECK1361;gene_synonym=JW5213;gene_synonym=Rz1;db_xref=EcoGene:EG14381 EMBL CDS 1423400 1423585 . + 0 ID=.2978;gene=rzoR;locus_tag=b4528;gene_synonym=ECK1361;gene_synonym=JW5213;gene_synonym=Rz1;function=Phage or Prophage Related;note=completely contained in another CDS%3B GO_component: GO:0009279 - cell outer membrane;codon_start=1;transl_table=11;product=Rac prophage%3B putative lipoprotein;protein_id=ABD18660.1;db_xref=GI:87081890;db_xref=ASAP:ABE-0285049;db_xref=UniProtKB/Swiss-Prot:P58042;db_xref=EcoGene:EG14381 EMBL gene 1423782 1425239 . + . ID=.2979;gene=trkG;locus_tag=b1363;gene_synonym=ECK1362;gene_synonym=JW1358;db_xref=EcoGene:EG11020 EMBL CDS 1423782 1425239 . + 0 ID=.2980;gene=trkG;locus_tag=b1363;gene_synonym=ECK1362;gene_synonym=JW1358;function=transport%3B Transport of small molecules: Cations%3B Phage or Prophage Related;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=Rac prophage%3B potassium transporter subunit;protein_id=AAC74445.1;db_xref=GI:1787626;db_xref=ASAP:ABE-0004567;db_xref=UniProtKB/Swiss-Prot:P23849;db_xref=EcoGene:EG11020 EMBL gene 1425377 1425640 . + . ID=.2981;gene=ynaK;locus_tag=b1365;gene_synonym=ECK1363;gene_synonym=JW1359;db_xref=EcoGene:EG14296 EMBL CDS 1425377 1425640 . + 0 ID=.2982;gene=ynaK;locus_tag=b1365;gene_synonym=ECK1363;gene_synonym=JW1359;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=Rac prophage%3B conserved protein;protein_id=AAC74447.1;db_xref=GI:1787628;db_xref=ASAP:ABE-0004571;db_xref=UniProtKB/Swiss-Prot:P76068;db_xref=EcoGene:EG14296 EMBL gene 1425630 1426082 . + . ID=.2983;gene=ydaY;locus_tag=b1366;gene_synonym=ECK1364;gene_synonym=JW1360;pseudo=true;db_xref=EcoGene:EG13367 EMBL CDS 1425630 1426082 . + 0 ID=.2984;gene=ydaY;locus_tag=b1366;gene_synonym=ECK1364;gene_synonym=JW1360;note=pseudogene%2C Rac prophage%3BPhage or Prophage Related;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0004574;db_xref=UniProtKB/Swiss-Prot:P76069;db_xref=EcoGene:EG13367 EMBL gene 1426454 1427386 . + . ID=.2985;gene=tmpR;locus_tag=b1368;gene_synonym=ECK1365;gene_synonym=JW1361;gene_synonym=ynaA;pseudo=true;db_xref=EcoGene:EG13369 EMBL CDS 1426454 1427386 . + 0 ID=.2986;gene=tmpR;locus_tag=b1368;gene_synonym=ECK1365;gene_synonym=JW1361;gene_synonym=ynaA;note=Rac prophage%3B pseudogene%2C tail protein family%3BPhage or Prophage Related%3B putative alpha helix protein;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0004581;db_xref=UniProtKB/Swiss-Prot:P77658;db_xref=EcoGene:EG13369 EMBL biological_region 1427389 1428984 . + . ID=.2987;featflags=type:gene;gene=lomR;locus_tag=b4570;gene_synonym=ECK1366;gene_synonym=JW5884;gene_synonym=JW5904;pseudo=true;db_xref=EcoGene:EG14315 EMBL gene 1427389 1427598 . + . Parent=.2987 EMBL gene 1428796 1428984 . + . Parent=.2987 EMBL biological_region 1427389 1428984 . + 0 ID=.2990;featflags=type:CDS;gene=lomR;locus_tag=b4570;gene_synonym=ECK1366;gene_synonym=JW5884;gene_synonym=JW5904;note=pseudogene%2C Rac prophage lom homolog%3BPhage or Prophage Related%3B interrupted by IS5 and N-ter deletion;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0004583;db_xref=ASAP:ABE-0004590;db_xref=ASAP:ABE-0285103;db_xref=UniProtKB/Swiss-Prot:P77184;db_xref=EcoGene:EG14315 EMBL CDS 1427389 1427598 . + 0 Parent=.2990 EMBL CDS 1428796 1428984 . + 0 Parent=.2990 EMBL sequence_feature 1427599 1428794 . - . ID=.2993;note=*mobile_element_type: insertion sequence:IS5Y EMBL gene 1427746 1428726 . - . ID=.2994;gene=insH1;locus_tag=b1370;gene_synonym=ECK0261;db_xref=EcoGene:EG40008 EMBL CDS 1427746 1428726 . - 0 ID=.2995;gene=insH1;locus_tag=b1370;gene_synonym=ECK0261;function=IS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;codon_start=1;transl_table=11;product=IS5 transposase and trans-activator;protein_id=AAC74452.1;db_xref=GI:1787634;db_xref=ASAP:ABE-0004586;db_xref=UniProtKB/Swiss-Prot:P0CE53;db_xref=EcoGene:EG40008 EMBL gene 1429049 1432411 . + . ID=.2996;gene=stfR;locus_tag=b1372;gene_synonym=ECK1367;gene_synonym=JW1366;gene_synonym=ynaB;db_xref=EcoGene:EG13370 EMBL CDS 1429049 1432411 . + 0 ID=.2997;gene=stfR;locus_tag=b1372;gene_synonym=ECK1367;gene_synonym=JW1366;gene_synonym=ynaB;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=Rac prophage%3B putative tail fiber protein;protein_id=AAC74454.2;db_xref=GI:87081892;db_xref=ASAP:ABE-0004595;db_xref=UniProtKB/Swiss-Prot:P76072;db_xref=EcoGene:EG13370 EMBL gene 1432411 1432986 . + . ID=.2998;gene=tfaR;locus_tag=b1373;gene_synonym=ECK1368;gene_synonym=JW1367;gene_synonym=ynaC;db_xref=EcoGene:EG13371 EMBL CDS 1432411 1432986 . + 0 ID=.2999;gene=tfaR;locus_tag=b1373;gene_synonym=ECK1368;gene_synonym=JW1367;gene_synonym=ynaC;function=Phage or Prophage Related;note=tail fiber assembly protein homolog from lambdoid prophage Rac;codon_start=1;transl_table=11;product=Rac prophage%3B putative tail fiber assembly protein;protein_id=AAC74455.1;db_xref=GI:1787637;db_xref=ASAP:ABE-0004597;db_xref=UniProtKB/Swiss-Prot:P77163;db_xref=EcoGene:EG13371 EMBL gene 1433084 1433674 . - . ID=.3000;gene=pinR;locus_tag=b1374;gene_synonym=ECK1369;gene_synonym=JW1368;gene_synonym=ynaD;db_xref=EcoGene:EG13372 EMBL CDS 1433084 1433674 . - 0 ID=.3001;gene=pinR;locus_tag=b1374;gene_synonym=ECK1369;gene_synonym=JW1368;gene_synonym=ynaD;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=Rac prophage%3B putative site-specific recombinase;protein_id=AAC74456.1;db_xref=GI:1787638;db_xref=ASAP:ABE-0004599;db_xref=UniProtKB/Swiss-Prot:P0ADI0;db_xref=EcoGene:EG13372 EMBL gene 1433991 1434224 . - . ID=.3002;gene=ynaE;locus_tag=b1375;gene_synonym=ECK1370;gene_synonym=JW1369;db_xref=EcoGene:EG13373 EMBL CDS 1433991 1434224 . - 0 ID=.3003;gene=ynaE;locus_tag=b1375;gene_synonym=ECK1370;gene_synonym=JW1369;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=cold shock protein%2C Rac prophage;protein_id=AAC74457.2;db_xref=GI:345297173;db_xref=ASAP:ABE-0004602;db_xref=UniProtKB/Swiss-Prot:P76073;db_xref=EcoGene:EG13373 EMBL gene 1434958 1435008 . - . ID=.3004;gene=ttcC;locus_tag=b4638;gene_synonym=ECK4447;pseudo=true;db_xref=EcoGene:EG14435 EMBL CDS 1434958 1435008 . - 0 ID=.3005;gene=ttcC;locus_tag=b4638;gene_synonym=ECK4447;note=pseudogene%2C prophage Rac integration site ttcA duplication%3BPhage or Prophage Related;pseudo=true;codon_start=1;transl_table=11;db_xref=EcoGene:EG14435 EMBL gene 1435185 1435619 . - . ID=.3006;gene=uspF;locus_tag=b1376;gene_synonym=ECK1371;gene_synonym=JW1370;gene_synonym=ynaF;gene_synonym=yzzL;db_xref=EcoGene:EG12674 EMBL CDS 1435185 1435619 . - 0 ID=.3007;gene=uspF;locus_tag=b1376;gene_synonym=ECK1371;gene_synonym=JW1370;gene_synonym=ynaF;gene_synonym=yzzL;function=putative structure%3B Not classified;experiment=N-terminus verified by Edman degradation: PMID 8740179%2C9298646;note=putative filament protein;codon_start=1;transl_table=11;product=stress-induced protein%2C ATP-binding protein;protein_id=AAC74458.2;db_xref=GI:87081893;db_xref=ASAP:ABE-0004605;db_xref=UniProtKB/Swiss-Prot:P37903;db_xref=EcoGene:EG12674 EMBL gene 1435760 1436893 . - . ID=.3008;gene=ompN;locus_tag=b1377;gene_synonym=ECK1372;gene_synonym=JW1371;gene_synonym=ynaG;db_xref=EcoGene:EG13375 EMBL CDS 1435760 1436893 . - 0 ID=.3009;gene=ompN;locus_tag=b1377;gene_synonym=ECK1372;gene_synonym=JW1371;gene_synonym=ynaG;function=putative membrane%3B Not classified;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane;codon_start=1;transl_table=11;product=outer membrane pore protein N%2C non-specific;protein_id=AAC74459.1;db_xref=GI:1787641;db_xref=ASAP:ABE-0004608;db_xref=UniProtKB/Swiss-Prot:P77747;db_xref=EcoGene:EG13375 EMBL gene 1437121 1437229 . + . ID=.3010;gene=micC;locus_tag=b4427;gene_synonym=ECK1373;gene_synonym=IS063;gene_synonym=JWR0234;gene_synonym=tke8;db_xref=EcoGene:EG31144 EMBL ncRNA 1437121 1437229 . + . ID=.3011;ncrna_class=antisense_RNA;gene=micC;locus_tag=b4427;gene_synonym=ECK1373;gene_synonym=IS063;gene_synonym=JWR0234;gene_synonym=tke8;product=sRNA antisense regulator of OmpC translation%2C Hfq-dependent;note=regulatory antisense RNA affecting ompC expression;db_xref=ASAP:ABE-0047248;db_xref=EcoGene:EG31144 EMBL gene 1437260 1440784 . - . ID=.3012;gene=pfo;locus_tag=b1378;gene_synonym=ECK1374;gene_synonym=JW1372;gene_synonym=nifJ;gene_synonym=soi-9;gene_synonym=ydbK;db_xref=EcoGene:EG13183 EMBL CDS 1437260 1440784 . - 0 ID=.3013;gene=pfo;locus_tag=b1378;gene_synonym=ECK1374;gene_synonym=JW1372;gene_synonym=nifJ;gene_synonym=soi-9;gene_synonym=ydbK;function=putative enzyme%3B Not classified;note=putative oxidoreductase%2C Fe-S subunit;codon_start=1;transl_table=11;product=pyruvate-flavodoxin oxidoreductase;protein_id=AAC74460.1;db_xref=GI:1787642;db_xref=ASAP:ABE-0004613;db_xref=UniProtKB/Swiss-Prot:P52647;db_xref=EcoGene:EG13183 EMBL gene 1441058 1441324 . + . ID=.3014;gene=ydbJ;locus_tag=b4529;gene_synonym=ECK1375;gene_synonym=JW5215;db_xref=EcoGene:EG13182 EMBL CDS 1441058 1441324 . + 0 ID=.3015;gene=ydbJ;locus_tag=b4529;gene_synonym=ECK1375;gene_synonym=JW5215;note=GO_component: GO:0009279 - cell outer membrane;codon_start=1;transl_table=11;product=DUF333 family putative lipoprotein;protein_id=ABD18661.1;db_xref=GI:87081894;db_xref=ASAP:ABE-0285050;db_xref=UniProtKB/Swiss-Prot:P0ACW2;db_xref=EcoGene:EG13182 EMBL gene 1441321 1441743 . - . ID=.3016;gene=hslJ;locus_tag=b1379;gene_synonym=ECK1376;gene_synonym=JW1374;gene_synonym=ydbI;db_xref=EcoGene:EG13181 EMBL CDS 1441321 1441743 . - 0 ID=.3017;gene=hslJ;locus_tag=b1379;gene_synonym=ECK1376;gene_synonym=JW1374;gene_synonym=ydbI;function=factor%3B Adaptations%2C atypical conditions;note=heat shock protein hslJ%3B GO_process: GO:0009266 - response to temperature stimulus;codon_start=1;transl_table=11;product=heat-inducible lipoprotein involved in novobiocin resistance;protein_id=AAC74461.1;db_xref=GI:1787644;db_xref=ASAP:ABE-0004616;db_xref=UniProtKB/Swiss-Prot:P52644;db_xref=EcoGene:EG13181 EMBL gene 1441854 1442843 . - . ID=.3018;gene=ldhA;locus_tag=b1380;gene_synonym=ECK1377;gene_synonym=hslF;gene_synonym=hslI;gene_synonym=htpH;gene_synonym=JW1375;db_xref=EcoGene:EG13186 EMBL CDS 1441854 1442843 . - 0 ID=.3019;gene=ldhA;locus_tag=b1380;gene_synonym=ECK1377;gene_synonym=hslF;gene_synonym=hslI;gene_synonym=htpH;gene_synonym=JW1375;ec_number=1.1.1.28;function=enzyme%3B Energy metabolism%2C carbon: Fermentation;note=GO_process: GO:0006113 - fermentation;codon_start=1;transl_table=11;product=fermentative D-lactate dehydrogenase%2C NAD-dependent;protein_id=AAC74462.1;db_xref=GI:1787645;db_xref=ASAP:ABE-0004619;db_xref=UniProtKB/Swiss-Prot:P52643;db_xref=EcoGene:EG13186 EMBL gene 1443051 1445690 . + . ID=.3020;gene=ydbH;locus_tag=b1381;gene_synonym=ECK1378;gene_synonym=JW1376;db_xref=EcoGene:EG13180 EMBL CDS 1443051 1445690 . + 0 ID=.3021;gene=ydbH;locus_tag=b1381;gene_synonym=ECK1378;gene_synonym=JW1376;codon_start=1;transl_table=11;product=putative membrane-anchored protein%2C function unknown;protein_id=AAC74463.1;db_xref=GI:1787646;db_xref=ASAP:ABE-0004623;db_xref=UniProtKB/Swiss-Prot:P52645;db_xref=EcoGene:EG13180 EMBL gene 1445687 1445872 . + . ID=.3022;gene=ynbE;locus_tag=b1382;gene_synonym=ECK1379;gene_synonym=JW1377;db_xref=EcoGene:EG14298 EMBL CDS 1445687 1445872 . + 0 ID=.3023;gene=ynbE;locus_tag=b1382;gene_synonym=ECK1379;gene_synonym=JW1377;codon_start=1;transl_table=11;product=lipoprotein;protein_id=AAC74464.1;db_xref=GI:1787647;db_xref=ASAP:ABE-0004625;db_xref=UniProtKB/Swiss-Prot:P64448;db_xref=EcoGene:EG14298 EMBL gene 1445880 1446206 . + . ID=.3024;gene=ydbL;locus_tag=b1383;gene_synonym=ECK1380;gene_synonym=JW5216;db_xref=EcoGene:EG13733 EMBL CDS 1445880 1446206 . + 0 ID=.3025;gene=ydbL;locus_tag=b1383;gene_synonym=ECK1380;gene_synonym=JW5216;codon_start=1;transl_table=11;product=DUF1318 family protein;protein_id=AAC74465.2;db_xref=GI:87081895;db_xref=ASAP:ABE-0004627;db_xref=UniProtKB/Swiss-Prot:P76076;db_xref=EcoGene:EG13733 EMBL gene 1446378 1447283 . - . ID=.3026;gene=feaR;locus_tag=b1384;gene_synonym=ECK1381;gene_synonym=JW1379;gene_synonym=maoB;gene_synonym=maoR;gene_synonym=maoX;gene_synonym=ydbM;db_xref=EcoGene:EG13422 EMBL CDS 1446378 1447283 . - 0 ID=.3027;gene=feaR;locus_tag=b1384;gene_synonym=ECK1381;gene_synonym=JW1379;gene_synonym=maoB;gene_synonym=maoR;gene_synonym=maoX;gene_synonym=ydbM;function=regulator%3B Not classified;experiment=N-terminus verified by Edman degradation: PMID 8631685;note=regulatory protein for 2-phenylethylamine catabolism%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0009063 - cellular amino acid catabolic process%3B GO_process: GO:0009310 - amine catabolic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=transcriptional activator for tynA and feaB;protein_id=AAC74466.1;db_xref=GI:1787649;db_xref=ASAP:ABE-0004630;db_xref=UniProtKB/Swiss-Prot:Q47129;db_xref=EcoGene:EG13422 EMBL gene 1447519 1449018 . + . ID=.3028;gene=feaB;locus_tag=b1385;gene_synonym=ECK1382;gene_synonym=JW1380;gene_synonym=padA;gene_synonym=ydbG;db_xref=EcoGene:EG13179 EMBL CDS 1447519 1449018 . + 0 ID=.3029;gene=feaB;locus_tag=b1385;gene_synonym=ECK1382;gene_synonym=JW1380;gene_synonym=padA;gene_synonym=ydbG;ec_number=1.2.1.39;function=enzyme%3B Degradation of small molecules: Carbon compounds;experiment=N-terminus verified by Edman degradation: PMID 9043126%2C9109378;note=GO_process: GO:0009310 - amine catabolic process%3B GO_process: GO:0009435 - NAD biosynthetic process;codon_start=1;transl_table=11;product=phenylacetaldehyde dehydrogenase;protein_id=AAC74467.2;db_xref=GI:87081896;db_xref=ASAP:ABE-0004637;db_xref=UniProtKB/Swiss-Prot:P80668;db_xref=EcoGene:EG13179 EMBL gene 1449076 1451349 . - . ID=.3030;gene=tynA;locus_tag=b1386;gene_synonym=ECK1383;gene_synonym=JW1381;gene_synonym=maoA;db_xref=EcoGene:EG13140 EMBL CDS 1449076 1451349 . - 0 ID=.3031;gene=tynA;locus_tag=b1386;gene_synonym=ECK1383;gene_synonym=JW1381;gene_synonym=maoA;ec_number=1.4.3.21;function=enzyme%3B Degradation of small molecules: Amines;note=copper amine oxidase (tyramine oxidase)%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0009063 - cellular amino acid catabolic process%3B GO_process: GO:0009310 - amine catabolic process;codon_start=1;transl_table=11;product=tyramine oxidase%2C copper-requiring;protein_id=AAC74468.1;db_xref=GI:1787651;db_xref=ASAP:ABE-0004639;db_xref=UniProtKB/Swiss-Prot:P46883;db_xref=EcoGene:EG13140 EMBL gene 1451597 1453642 . - . ID=.3032;gene=paaZ;locus_tag=b1387;gene_synonym=ECK1384;gene_synonym=JW1382;gene_synonym=maoC;gene_synonym=tynP?;gene_synonym=ydbN;db_xref=EcoGene:EG13735 EMBL CDS 1451597 1453642 . - 0 ID=.3033;gene=paaZ;locus_tag=b1387;gene_synonym=ECK1384;gene_synonym=JW1382;gene_synonym=maoC;gene_synonym=tynP?;gene_synonym=ydbN;function=enzyme%3B Phenylacetic acid degradation;note=GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=oxepin-CoA hydrolase and 3-oxo-5%2C6-dehydrosuberyl-CoA semialdehyde dehydrogenase;protein_id=AAC74469.1;db_xref=GI:1787653;db_xref=ASAP:ABE-0004644;db_xref=UniProtKB/Swiss-Prot:P77455;db_xref=EcoGene:EG13735 EMBL gene 1453927 1454856 . + . ID=.3034;gene=paaA;locus_tag=b1388;gene_synonym=ECK1385;gene_synonym=JW1383;gene_synonym=ydbO;db_xref=EcoGene:EG13736 EMBL CDS 1453927 1454856 . + 0 ID=.3035;gene=paaA;locus_tag=b1388;gene_synonym=ECK1385;gene_synonym=JW1383;gene_synonym=ydbO;function=enzyme%3B Phenylacetic acid degradation;note=GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=ring 1%2C2-phenylacetyl-CoA epoxidase subunit;protein_id=AAC74470.1;db_xref=GI:1787654;db_xref=ASAP:ABE-0004649;db_xref=UniProtKB/Swiss-Prot:P76077;db_xref=EcoGene:EG13736 EMBL gene 1454868 1455155 . + . ID=.3036;gene=paaB;locus_tag=b1389;gene_synonym=ECK1386;gene_synonym=JW1384;gene_synonym=ynbF;db_xref=EcoGene:EG14299 EMBL CDS 1454868 1455155 . + 0 ID=.3037;gene=paaB;locus_tag=b1389;gene_synonym=ECK1386;gene_synonym=JW1384;gene_synonym=ynbF;function=enzyme%3B Phenylacetic acid degradation;note=GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=putative ring 1%2C2-phenylacetyl-CoA epoxidase subunit;protein_id=AAC74471.1;db_xref=GI:1787655;db_xref=ASAP:ABE-0004651;db_xref=UniProtKB/Swiss-Prot:P76078;db_xref=EcoGene:EG14299 EMBL gene 1455164 1455910 . + . ID=.3038;gene=paaC;locus_tag=b1390;gene_synonym=ECK1387;gene_synonym=JW1385;gene_synonym=ydbP;db_xref=EcoGene:EG13737 EMBL CDS 1455164 1455910 . + 0 ID=.3039;gene=paaC;locus_tag=b1390;gene_synonym=ECK1387;gene_synonym=JW1385;gene_synonym=ydbP;function=enzyme%3B Phenylacetic acid degradation;note=GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=ring 1%2C2-phenylacetyl-CoA epoxidase subunit;protein_id=AAC74472.1;db_xref=GI:1787656;db_xref=ASAP:ABE-0004653;db_xref=UniProtKB/Swiss-Prot:P76079;db_xref=EcoGene:EG13737 EMBL gene 1455925 1456422 . + . ID=.3040;gene=paaD;locus_tag=b1391;gene_synonym=ECK1388;gene_synonym=JW5217;gene_synonym=ydbQ;db_xref=EcoGene:EG13738 EMBL CDS 1455925 1456422 . + 0 ID=.3041;gene=paaD;locus_tag=b1391;gene_synonym=ECK1388;gene_synonym=JW5217;gene_synonym=ydbQ;function=enzyme%3B Phenylacetic acid degradation;note=GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=ring 1%2C2-phenylacetyl-CoA epoxidase subunit;protein_id=AAC74473.4;db_xref=GI:226510939;db_xref=ASAP:ABE-0004655;db_xref=UniProtKB/Swiss-Prot:P76080;db_xref=EcoGene:EG13738 EMBL gene 1456430 1457500 . + . ID=.3042;gene=paaE;locus_tag=b1392;gene_synonym=ECK1389;gene_synonym=JW1387;gene_synonym=ydbR;db_xref=EcoGene:EG13739 EMBL CDS 1456430 1457500 . + 0 ID=.3043;gene=paaE;locus_tag=b1392;gene_synonym=ECK1389;gene_synonym=JW1387;gene_synonym=ydbR;function=enzyme%3B Phenylacetic acid degradation;note=GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=ring 1%2C2-phenylacetyl-CoA epoxidase%2C NAD(P)H oxidoreductase component;protein_id=AAC74474.1;db_xref=GI:1787658;db_xref=ASAP:ABE-0004657;db_xref=UniProtKB/Swiss-Prot:P76081;db_xref=EcoGene:EG13739 EMBL gene 1457497 1458264 . + . ID=.3044;gene=paaF;locus_tag=b1393;gene_synonym=ECK1390;gene_synonym=JW1388;gene_synonym=ydbR;db_xref=EcoGene:EG13740 EMBL CDS 1457497 1458264 . + 0 ID=.3045;gene=paaF;locus_tag=b1393;gene_synonym=ECK1390;gene_synonym=JW1388;gene_synonym=ydbR;ec_number=4.2.1.17;function=enzyme%3B Phenylacetic acid degradation;note=GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=2%2C3-dehydroadipyl-CoA hydratase;protein_id=AAC74475.1;db_xref=GI:1787659;db_xref=ASAP:ABE-0004659;db_xref=UniProtKB/Swiss-Prot:P76082;db_xref=EcoGene:EG13740 EMBL gene 1458264 1459052 . + . ID=.3046;gene=paaG;locus_tag=b1394;gene_synonym=ECK1391;gene_synonym=JW1389;gene_synonym=ydbT;db_xref=EcoGene:EG13741 EMBL CDS 1458264 1459052 . + 0 ID=.3047;gene=paaG;locus_tag=b1394;gene_synonym=ECK1391;gene_synonym=JW1389;gene_synonym=ydbT;ec_number=4.2.1.17;function=enzyme%3B Phenylacetic acid degradation;note=GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=1%2C2-epoxyphenylacetyl-CoA isomerase%2C oxepin-CoA-forming;protein_id=AAC74476.1;db_xref=GI:1787660;db_xref=ASAP:ABE-0004661;db_xref=UniProtKB/Swiss-Prot:P77467;db_xref=EcoGene:EG13741 EMBL gene 1459054 1460481 . + . ID=.3048;gene=paaH;locus_tag=b1395;gene_synonym=ECK1392;gene_synonym=JW1390;gene_synonym=ydbU;db_xref=EcoGene:EG13742 EMBL CDS 1459054 1460481 . + 0 ID=.3049;gene=paaH;locus_tag=b1395;gene_synonym=ECK1392;gene_synonym=JW1390;gene_synonym=ydbU;ec_number=1.1.1.157;function=enzyme%3B Phenylacetic acid degradation;note=GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=3-hydroxyadipyl-CoA dehydrogenase%2C NAD+-dependent;protein_id=AAC74477.1;db_xref=GI:1787661;db_xref=ASAP:ABE-0004663;db_xref=UniProtKB/Swiss-Prot:P76083;db_xref=EcoGene:EG13742 EMBL gene 1460471 1460893 . + . ID=.3050;gene=paaI;locus_tag=b1396;gene_synonym=ECK1393;gene_synonym=JW1391;gene_synonym=ydbV;db_xref=EcoGene:EG13743 EMBL CDS 1460471 1460893 . + 0 ID=.3051;gene=paaI;locus_tag=b1396;gene_synonym=ECK1393;gene_synonym=JW1391;gene_synonym=ydbV;function=enzyme%3B Phenylacetic acid degradation;note=GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=hydroxyphenylacetyl-CoA thioesterase;protein_id=AAC74478.1;db_xref=GI:1787662;db_xref=ASAP:ABE-0004666;db_xref=UniProtKB/Swiss-Prot:P76084;db_xref=EcoGene:EG13743 EMBL gene 1460893 1462098 . + . ID=.3052;gene=paaJ;locus_tag=b1397;gene_synonym=ECK1394;gene_synonym=JW1392;gene_synonym=ydbW;db_xref=EcoGene:EG13744 EMBL CDS 1460893 1462098 . + 0 ID=.3053;gene=paaJ;locus_tag=b1397;gene_synonym=ECK1394;gene_synonym=JW1392;gene_synonym=ydbW;function=enzyme%3B Phenylacetic acid degradation;note=GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=3-oxoadipyl-CoA/3-oxo-5%2C6-dehydrosuberyl-CoA thiolase;protein_id=AAC74479.1;db_xref=GI:1787663;db_xref=ASAP:ABE-0004668;db_xref=UniProtKB/Swiss-Prot:P0C7L2;db_xref=EcoGene:EG13744 EMBL gene 1462125 1463438 . + . ID=.3054;gene=paaK;locus_tag=b1398;gene_synonym=ECK1395;gene_synonym=JW5218;db_xref=EcoGene:EG13745 EMBL CDS 1462125 1463438 . + 0 ID=.3055;gene=paaK;locus_tag=b1398;gene_synonym=ECK1395;gene_synonym=JW5218;ec_number=6.2.1.30;function=enzyme%3B Phenylacetic acid degradation;note=GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=phenylacetyl-CoA ligase;protein_id=AAC74480.1;db_xref=GI:1787664;db_xref=ASAP:ABE-0004671;db_xref=UniProtKB/Swiss-Prot:P76085;db_xref=EcoGene:EG13745 EMBL gene 1463539 1464489 . + . ID=.3056;gene=paaX;locus_tag=b1399;gene_synonym=ECK1396;gene_synonym=JW1394;gene_synonym=ydbY;db_xref=EcoGene:EG13746 EMBL CDS 1463539 1464489 . + 0 ID=.3057;gene=paaX;locus_tag=b1399;gene_synonym=ECK1396;gene_synonym=JW1394;gene_synonym=ydbY;function=regualtor: Phenylacetic acid degradation;note=GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=transcriptional repressor of phenylacetic acid degradation paa operon%2C phenylacetyl-CoA inducer;protein_id=AAC74481.1;db_xref=GI:1787666;db_xref=ASAP:ABE-0004674;db_xref=UniProtKB/Swiss-Prot:P76086;db_xref=EcoGene:EG13746 EMBL gene 1464471 1465061 . + . ID=.3058;gene=paaY;locus_tag=b1400;gene_synonym=ECK1397;gene_synonym=JW1395;gene_synonym=ydbZ;db_xref=EcoGene:EG13747 EMBL CDS 1464471 1465061 . + 0 ID=.3059;gene=paaY;locus_tag=b1400;gene_synonym=ECK1397;gene_synonym=JW1395;gene_synonym=ydbZ;function=enzyme%3B Phenylacetic acid degradation;codon_start=1;transl_table=11;product=thioesterase required for phenylacetic acid degradation%3B trimeric%3B phenylacetate regulatory and detoxification protein%3B hexapeptide repeat protein;protein_id=AAC74482.1;db_xref=GI:1787667;db_xref=ASAP:ABE-0004676;db_xref=UniProtKB/Swiss-Prot:P77181;db_xref=EcoGene:EG13747 EMBL gene 1465165 1465230 . - . ID=.3060;gene=ynbG;locus_tag=b4674;gene_synonym=ECK4489;db_xref=EcoGene:EG14479 EMBL CDS 1465165 1465230 . - 0 ID=.3061;gene=ynbG;locus_tag=b4674;gene_synonym=ECK4489;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=ACO59992.1;db_xref=GI:226510940;db_xref=UniProtKB/Swiss-Prot:C1P600;db_xref=EcoGene:EG14479 EMBL biological_region 1465392 1474013 . + . ID=.3062;featflags=type:gene;gene=ydbA;locus_tag=b4492;gene_synonym=ECK1398;gene_synonym=JW1402;gene_synonym=JW5802;pseudo=true;db_xref=EcoGene:EG11307 EMBL gene 1465392 1467904 . + . Parent=.3062 EMBL gene 1469241 1469293 . + . Parent=.3062 EMBL gene 1470517 1474013 . + . Parent=.3062 EMBL biological_region 1465392 1474013 . + 0 ID=.3066;featflags=type:CDS;gene=ydbA;locus_tag=b4492;gene_synonym=ECK1398;gene_synonym=JW1402;gene_synonym=JW5802;note=pseudogene%2C autotransporter homolog%3B interrupted by IS2 and IS30;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0004680;db_xref=ASAP:ABE-0004694;db_xref=ASAP:ABE-0285093;db_xref=UniProtKB/Swiss-Prot:P33666;db_xref=EcoGene:EG11307 EMBL CDS 1465392 1467904 . + 0 Parent=.3066 EMBL CDS 1469241 1469293 . + 0 Parent=.3066 EMBL CDS 1470517 1474013 . + 0 Parent=.3066 EMBL sequence_feature 1467910 1469240 . - . ID=.3070;note=*mobile_element_type: insertion sequence:IS2D EMBL gene 1467921 1468826 . - . ID=.3071;gene=insD1;locus_tag=b1402;gene_synonym=ECK0358;db_xref=EcoGene:EG40004 EMBL CDS 1467921 1468826 . - 0 ID=.3072;gene=insD1;locus_tag=b1402;gene_synonym=ECK0358;function=IS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;codon_start=1;transl_table=11;product=IS2 transposase TnpB;protein_id=AAC74484.1;db_xref=GI:1787669;db_xref=ASAP:ABE-0004683;db_xref=UniProtKB/Swiss-Prot:P0CF54;db_xref=EcoGene:EG40004 EMBL gene 1468784 1469149 . - . ID=.3073;gene=insC1;locus_tag=b1403;gene_synonym=ECK0357;db_xref=EcoGene:EG40003 EMBL CDS 1468784 1469149 . - 0 ID=.3074;gene=insC1;locus_tag=b1403;gene_synonym=ECK0357;function=IS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;codon_start=1;transl_table=11;product=IS2 repressor TnpA;protein_id=AAC74485.2;db_xref=GI:145693126;db_xref=ASAP:ABE-0004685;db_xref=UniProtKB/Swiss-Prot:P0CF41;db_xref=EcoGene:EG40003 EMBL sequence_feature 1469296 1470516 . + . ID=.3075;note=*mobile_element_type: insertion sequence:IS30C EMBL gene 1469358 1470509 . + . ID=.3076;gene=insI1;locus_tag=b1404;gene_synonym=ECK0258;db_xref=EcoGene:EG40009 EMBL CDS 1469358 1470509 . + 0 ID=.3077;gene=insI1;locus_tag=b1404;gene_synonym=ECK0258;function=IS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;codon_start=1;transl_table=11;product=IS30 transposase;protein_id=AAC74486.1;db_xref=GI:1787671;db_xref=ASAP:ABE-0004691;db_xref=UniProtKB/Swiss-Prot:P0CF89;db_xref=EcoGene:EG40009 EMBL gene 1474221 1475081 . + . ID=.3078;gene=ydbC;locus_tag=b1406;gene_synonym=ECK1399;gene_synonym=JW1403;db_xref=EcoGene:EG11309 EMBL CDS 1474221 1475081 . + 0 ID=.3079;gene=ydbC;locus_tag=b1406;gene_synonym=ECK1399;gene_synonym=JW1403;function=putative enzyme%3B Not classified;note=putative dehydrogenase;codon_start=1;transl_table=11;product=putative NAD(P)-binding oxidoreductase;protein_id=AAC74488.1;db_xref=GI:1787674;db_xref=ASAP:ABE-0004698;db_xref=UniProtKB/Swiss-Prot:P25906;db_xref=EcoGene:EG11309 EMBL gene 1475144 1477450 . + . ID=.3080;gene=ydbD;locus_tag=b1407;gene_synonym=ECK1400;gene_synonym=JW5221;db_xref=EcoGene:EG11310 EMBL CDS 1475144 1477450 . + 0 ID=.3081;gene=ydbD;locus_tag=b1407;gene_synonym=ECK1400;gene_synonym=JW5221;codon_start=1;transl_table=11;product=PF10971 family putative periplasmic methylglyoxal resistance protein;protein_id=AAC74489.2;db_xref=GI:87081900;db_xref=ASAP:ABE-0004701;db_xref=UniProtKB/Swiss-Prot:P25907;db_xref=EcoGene:EG11310 EMBL gene 1477621 1478226 . + . ID=.3082;gene=ynbA;locus_tag=b1408;gene_synonym=ECK1401;gene_synonym=JW1405;db_xref=EcoGene:EG13748 EMBL CDS 1477621 1478226 . + 0 ID=.3083;gene=ynbA;locus_tag=b1408;gene_synonym=ECK1401;gene_synonym=JW1405;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=inner membrane protein;protein_id=AAC74490.2;db_xref=GI:87081901;db_xref=ASAP:ABE-0004704;db_xref=UniProtKB/Swiss-Prot:P76090;db_xref=EcoGene:EG13748 EMBL gene 1478226 1479122 . + . ID=.3084;gene=ynbB;locus_tag=b1409;gene_synonym=ECK1402;gene_synonym=JW1406;db_xref=EcoGene:EG13749 EMBL CDS 1478226 1479122 . + 0 ID=.3085;gene=ynbB;locus_tag=b1409;gene_synonym=ECK1402;gene_synonym=JW1406;function=putative enzyme%3B Central intermediary metabolism: Nucleotide interconversions;note=putative phosphatidate cytidiltransferase%3B GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion;codon_start=1;transl_table=11;product=putative CDP-diglyceride synthase;protein_id=AAC74491.1;db_xref=GI:1787677;db_xref=ASAP:ABE-0004706;db_xref=UniProtKB/Swiss-Prot:P76091;db_xref=EcoGene:EG13749 EMBL gene 1479138 1480895 . + . ID=.3086;gene=ynbC;locus_tag=b1410;gene_synonym=ECK1403;gene_synonym=JW1407;db_xref=EcoGene:EG13750 EMBL CDS 1479138 1480895 . + 0 ID=.3087;gene=ynbC;locus_tag=b1410;gene_synonym=ECK1403;gene_synonym=JW1407;codon_start=1;transl_table=11;product=putative esterase;protein_id=AAC74492.1;db_xref=GI:1787678;db_xref=ASAP:ABE-0004708;db_xref=UniProtKB/Swiss-Prot:P76092;db_xref=EcoGene:EG13750 EMBL gene 1480909 1482201 . + . ID=.3088;gene=ynbD;locus_tag=b1411;gene_synonym=ECK1404;gene_synonym=JW1408;db_xref=EcoGene:EG13751 EMBL CDS 1480909 1482201 . + 0 ID=.3089;gene=ynbD;locus_tag=b1411;gene_synonym=ECK1404;gene_synonym=JW1408;function=putative enzyme%3B Not classified;note=putative enzymes;codon_start=1;transl_table=11;product=putative phosphatase inner membrane protein;protein_id=AAC74493.1;db_xref=GI:1787679;db_xref=ASAP:ABE-0004710;db_xref=UniProtKB/Swiss-Prot:P76093;db_xref=EcoGene:EG13751 EMBL gene 1482255 1482860 . - . ID=.3090;gene=azoR;locus_tag=b1412;gene_synonym=acpD;gene_synonym=ECK1405;gene_synonym=JW1409;db_xref=EcoGene:EG12695 EMBL CDS 1482255 1482860 . - 0 ID=.3091;gene=azoR;locus_tag=b1412;gene_synonym=acpD;gene_synonym=ECK1405;gene_synonym=JW1409;ec_number=3.1.4.14;function=enzyme%3B Fatty acid and phosphatidic acid biosynthesis;note=acyl carrier protein phosphodiesterase;codon_start=1;transl_table=11;product=NADH-azoreductase%2C FMN-dependent;protein_id=AAC74494.1;db_xref=GI:1787680;db_xref=ASAP:ABE-0004712;db_xref=UniProtKB/Swiss-Prot:P41407;db_xref=EcoGene:EG12695 EMBL gene 1483061 1486963 . + . ID=.3092;gene=hrpA;locus_tag=b1413;gene_synonym=ECK1406;gene_synonym=JW5905;db_xref=EcoGene:EG12936 EMBL CDS 1483061 1486963 . + 0 ID=.3093;gene=hrpA;locus_tag=b1413;gene_synonym=ECK1406;gene_synonym=JW5905;function=enzyme%3B DNA - replication%2C repair%2C restriction/modification;note=helicase%2C ATP-dependent%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006261 - DNA-dependent DNA replication;codon_start=1;transl_table=11;product=putative ATP-dependent helicase;protein_id=AAC74495.2;db_xref=GI:145693127;db_xref=ASAP:ABE-0004718;db_xref=UniProtKB/Swiss-Prot:P43329;db_xref=EcoGene:EG12936 EMBL gene 1487235 1488035 . + . ID=.3094;gene=ydcF;locus_tag=b1414;gene_synonym=ECK1407;gene_synonym=JW1411;db_xref=EcoGene:EG12110 EMBL CDS 1487235 1488035 . + 0 ID=.3095;gene=ydcF;locus_tag=b1414;gene_synonym=ECK1407;gene_synonym=JW1411;codon_start=1;transl_table=11;product=DUF218 superfamily protein%2C SAM-binding;protein_id=AAC74496.1;db_xref=GI:1787683;db_xref=ASAP:ABE-0004722;db_xref=UniProtKB/Swiss-Prot:P34209;db_xref=EcoGene:EG12110 EMBL gene 1488232 1489671 . + . ID=.3096;gene=aldA;locus_tag=b1415;gene_synonym=ald;gene_synonym=ECK1408;gene_synonym=JW1412;db_xref=EcoGene:EG10035 EMBL CDS 1488232 1489671 . + 0 ID=.3097;gene=aldA;locus_tag=b1415;gene_synonym=ald;gene_synonym=ECK1408;gene_synonym=JW1412;ec_number=1.2.1.22;function=enzyme%3B Energy metabolism%2C carbon: Fermentation;note=aldehyde dehydrogenase%2C NAD-linked%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0009438 - methylglyoxal metabolic process%3B GO_process: GO:0006113 - fermentation%3B GO_process: GO:0009441 - glycolate metabolic process;codon_start=1;transl_table=11;product=aldehyde dehydrogenase A%2C NAD-linked;protein_id=AAC74497.1;db_xref=GI:1787684;db_xref=ASAP:ABE-0004725;db_xref=UniProtKB/Swiss-Prot:P25553;db_xref=EcoGene:EG10035 EMBL repeat_region 1489683 1489704 . + . ID=.3098;note=REP116 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 1489713 1490713 . - . ID=.3099;gene=gapC;locus_tag=b4493;gene_synonym=ECK1409;gene_synonym=JW1413;gene_synonym=JW5906;pseudo=true;db_xref=EcoGene:EG12103 EMBL biological_region 1489713 1490713 . - 0 ID=.3100;featflags=type:CDS;gene=gapC;locus_tag=b4493;gene_synonym=ECK1409;gene_synonym=JW1413;gene_synonym=JW5906;note=pseudogene%2C GAP dehydrogenase%3B glyceraldehyde-3-phosphate dehydrogenase (second fragment);pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0004727;db_xref=ASAP:ABE-0004729;db_xref=ASAP:ABE-0285094;db_xref=UniProtKB/Swiss-Prot:P33898;db_xref=EcoGene:EG12103 EMBL CDS 1489713 1489964 . - 0 Parent=.3100 EMBL CDS 1489964 1490713 . - 0 Parent=.3100 EMBL gene 1490902 1491432 . + . ID=.3103;gene=cybB;locus_tag=b1418;gene_synonym=ECK1410;gene_synonym=JW5224;db_xref=EcoGene:EG10172 EMBL CDS 1490902 1491432 . + 0 ID=.3104;gene=cybB;locus_tag=b1418;gene_synonym=ECK1410;gene_synonym=JW5224;function=enzyme%3B Energy metabolism%2C carbon: Electron transport;note=GO_function: GO:0009055 - electron carrier activity%3B GO_process: GO:0017004 - cytochrome complex assembly;codon_start=1;transl_table=11;product=cytochrome b561;protein_id=AAC74500.2;db_xref=GI:87081903;db_xref=ASAP:ABE-0004733;db_xref=UniProtKB/Swiss-Prot:P0ABE5;db_xref=EcoGene:EG10172 EMBL gene 1491443 1491506 . - . ID=.3105;gene=rydC;locus_tag=b4597;gene_synonym=ECK4407;gene_synonym=IS067;db_xref=EcoGene:EG31168 EMBL ncRNA 1491443 1491506 . - . ID=.3106;ncrna_class=antisense_RNA;gene=rydC;locus_tag=b4597;gene_synonym=ECK4407;gene_synonym=IS067;product=sRNA antisense regulator of csgD and yejABEF%2C Hfq-dependent;db_xref=EcoGene:EG31168 EMBL gene 1491677 1491850 . + . ID=.3107;gene=ydcA;locus_tag=b1419;gene_synonym=ECK1411;gene_synonym=JW1416;db_xref=EcoGene:EG11219 EMBL CDS 1491677 1491850 . + 0 ID=.3108;gene=ydcA;locus_tag=b1419;gene_synonym=ECK1411;gene_synonym=JW1416;codon_start=1;transl_table=11;product=putative periplasmic protein;protein_id=AAC74501.1;db_xref=GI:1787688;db_xref=ASAP:ABE-0004736;db_xref=UniProtKB/Swiss-Prot:P0ACW4;db_xref=EcoGene:EG11219 EMBL gene 1491922 1492071 . - . ID=.3109;gene=hokB;locus_tag=b4428;gene_synonym=ECK1412;gene_synonym=JW5225;gene_synonym=ydcB;db_xref=EcoGene:EG11240 EMBL CDS 1491922 1492071 . - 0 ID=.3110;gene=hokB;locus_tag=b4428;gene_synonym=ECK1412;gene_synonym=JW5225;gene_synonym=ydcB;note=small toxic membrane polypeptide;codon_start=1;transl_table=11;product=toxic polypeptide%2C small;protein_id=AAT48130.1;db_xref=GI:48994884;db_xref=ASAP:ABE-0047283;db_xref=UniProtKB/Swiss-Prot:P77494;db_xref=EcoGene:EG11240 EMBL gene 1491962 1492129 . - . ID=.3111;gene=mokB;locus_tag=b1420;gene_synonym=ECK1413;gene_synonym=JW5882;db_xref=EcoGene:EG20260 EMBL CDS 1491962 1492129 . - 0 ID=.3112;gene=mokB;locus_tag=b1420;gene_synonym=ECK1413;gene_synonym=JW5882;note=regulatory peptide whose translation enables hokB expression;codon_start=1;transl_table=11;product=regulatory peptide;protein_id=AAC74502.1;db_xref=GI:1787689;db_xref=ASAP:ABE-0004738;db_xref=UniProtKB/Swiss-Prot:P76096;db_xref=EcoGene:EG20260 EMBL gene 1492119 1492174 . + . ID=.3113;gene=sokB;locus_tag=b4429;gene_synonym=ECK1414;gene_synonym=JWR0235;db_xref=EcoGene:EG31127 EMBL ncRNA 1492119 1492174 . + . ID=.3114;ncrna_class=antisense_RNA;gene=sokB;locus_tag=b4429;gene_synonym=ECK1414;gene_synonym=JWR0235;product=sRNA antisense regulator blocking mokB%2C and hence hokB%2C translation;note=antisense RNA blocking mokB and hokB translation;function=component of addiction module;db_xref=ASAP:ABE-0047249;db_xref=EcoGene:EG31127 EMBL gene 1492470 1494110 . + . ID=.3115;gene=trg;locus_tag=b1421;gene_synonym=ECK1415;gene_synonym=JW1417;db_xref=EcoGene:EG11018 EMBL CDS 1492470 1494110 . + 0 ID=.3116;gene=trg;locus_tag=b1421;gene_synonym=ECK1415;gene_synonym=JW1417;function=regulator%3B Chemotaxis and mobility;note=GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0042330 - taxis;codon_start=1;transl_table=11;product=methyl-accepting chemotaxis protein III%2C ribose and galactose sensor receptor;protein_id=AAC74503.1;db_xref=GI:1787690;db_xref=ASAP:ABE-0004744;db_xref=UniProtKB/Swiss-Prot:P05704;db_xref=EcoGene:EG11018 EMBL gene 1494148 1495071 . - . ID=.3117;gene=ydcI;locus_tag=b1422;gene_synonym=ECK1416;gene_synonym=JW5226;db_xref=EcoGene:EG13752 EMBL CDS 1494148 1495071 . - 0 ID=.3118;gene=ydcI;locus_tag=b1422;gene_synonym=ECK1416;gene_synonym=JW5226;function=putative regulator%3B Not classified;note=putative transcriptional regulator LYSR-type%3B GO_function: GO:0016563 - transcription activator activity%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=putative DNA-binding transcriptional regulator;protein_id=AAC74504.2;db_xref=GI:87081904;db_xref=ASAP:ABE-0004746;db_xref=UniProtKB/Swiss-Prot:P77171;db_xref=EcoGene:EG13752 EMBL gene 1495288 1496631 . + . ID=.3119;gene=ydcJ;locus_tag=b1423;gene_synonym=ECK1417;gene_synonym=JW1419;db_xref=EcoGene:EG13753 EMBL CDS 1495288 1496631 . + 0 ID=.3120;gene=ydcJ;locus_tag=b1423;gene_synonym=ECK1417;gene_synonym=JW1419;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=putative metalloenzyme;protein_id=AAC74505.1;db_xref=GI:1787692;db_xref=ASAP:ABE-0004750;db_xref=UniProtKB/Swiss-Prot:P76097;db_xref=EcoGene:EG13753 EMBL gene 1496856 1498511 . + . ID=.3121;gene=opgD;locus_tag=b1424;gene_synonym=ECK1418;gene_synonym=JW1420;gene_synonym=mdoD;gene_synonym=ydcG;gene_synonym=yzzZ;db_xref=EcoGene:EG12859 EMBL CDS 1496856 1498511 . + 0 ID=.3122;gene=opgD;locus_tag=b1424;gene_synonym=ECK1418;gene_synonym=JW1420;gene_synonym=mdoD;gene_synonym=ydcG;gene_synonym=yzzZ;function=putative structure%3B Not classified;note=putative glycoprotein%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0006970 - response to osmotic stress;codon_start=1;transl_table=11;product=OPG biosynthetic periplasmic protein;protein_id=AAC74506.3;db_xref=GI:145693128;db_xref=ASAP:ABE-0004754;db_xref=UniProtKB/Swiss-Prot:P40120;db_xref=EcoGene:EG12859 EMBL gene 1498651 1498875 . + . ID=.3123;gene=ydcH;locus_tag=b1426;gene_synonym=ECK1419;gene_synonym=JW5823;db_xref=EcoGene:EG12865 EMBL CDS 1498651 1498875 . + 0 ID=.3124;gene=ydcH;locus_tag=b1426;gene_synonym=ECK1419;gene_synonym=JW5823;codon_start=1;transl_table=11;product=DUF465 family protein;protein_id=AAC74508.2;db_xref=GI:87081906;db_xref=ASAP:ABE-0004761;db_xref=UniProtKB/Swiss-Prot:P0ACW6;db_xref=EcoGene:EG12865 EMBL gene 1498938 1499477 . + . ID=.3125;gene=rimL;locus_tag=b1427;gene_synonym=ECK1420;gene_synonym=JW1423;db_xref=EcoGene:EG10853 EMBL CDS 1498938 1499477 . + 0 ID=.3126;gene=rimL;locus_tag=b1427;gene_synonym=ECK1420;gene_synonym=JW1423;ec_number=2.3.1.-;function=enzyme%3B Ribosomes - maturation and modification;note=ribosomal-protein-serine acetyltransferase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=ribosomal-protein-L7/L12-serine acetyltransferase;protein_id=AAC74509.1;db_xref=GI:1787697;db_xref=ASAP:ABE-0004763;db_xref=UniProtKB/Swiss-Prot:P13857;db_xref=EcoGene:EG10853 EMBL gene 1499469 1500449 . - . ID=.3127;gene=ydcK;locus_tag=b1428;gene_synonym=ECK1421;gene_synonym=JW1424;db_xref=EcoGene:EG13754 EMBL CDS 1499469 1500449 . - 0 ID=.3128;gene=ydcK;locus_tag=b1428;gene_synonym=ECK1421;gene_synonym=JW1424;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC74510.1;db_xref=GI:1787698;db_xref=ASAP:ABE-0004765;db_xref=UniProtKB/Swiss-Prot:P76100;db_xref=EcoGene:EG13754 EMBL gene 1500573 1501565 . + . ID=.3129;gene=tehA;locus_tag=b1429;gene_synonym=ECK1422;gene_synonym=JW1425;db_xref=EcoGene:EG11883 EMBL CDS 1500573 1501565 . + 0 ID=.3130;gene=tehA;locus_tag=b1429;gene_synonym=ECK1422;gene_synonym=JW1425;function=transport%3B Drug/analog sensitivity;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=potassium-tellurite ethidium and proflavin transporter;protein_id=AAC74511.1;db_xref=GI:1787699;db_xref=ASAP:ABE-0004770;db_xref=UniProtKB/Swiss-Prot:P25396;db_xref=EcoGene:EG11883 EMBL gene 1501562 1502155 . + . ID=.3131;gene=tehB;locus_tag=b1430;gene_synonym=ECK1423;gene_synonym=JW1426;db_xref=EcoGene:EG11884 EMBL CDS 1501562 1502155 . + 0 ID=.3132;gene=tehB;locus_tag=b1430;gene_synonym=ECK1423;gene_synonym=JW1426;function=enzyme%3B Drug/analog sensitivity;note=GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=tellurite%2C selenium methyltransferase%2C SAM-dependent%3B tellurite%2C selenium resistance protein;protein_id=AAC74512.1;db_xref=GI:1787700;db_xref=ASAP:ABE-0004772;db_xref=UniProtKB/Swiss-Prot:P25397;db_xref=EcoGene:EG11884 EMBL gene 1502457 1503125 . + . ID=.3133;gene=ydcL;locus_tag=b1431;gene_synonym=ECK1424;gene_synonym=JW1427;db_xref=EcoGene:EG13755 EMBL CDS 1502457 1503125 . + 0 ID=.3134;gene=ydcL;locus_tag=b1431;gene_synonym=ECK1424;gene_synonym=JW1427;codon_start=1;transl_table=11;product=lipoprotein;protein_id=AAC74513.1;db_xref=GI:1787701;db_xref=ASAP:ABE-0004775;db_xref=UniProtKB/Swiss-Prot:P64451;db_xref=EcoGene:EG13755 EMBL sequence_feature 1503161 1504908 . + . ID=.3135;note=*mobile_element_type: insertion sequence:IS609 EMBL gene 1503218 1503649 . - . ID=.3136;gene=insP;locus_tag=b4578;gene_synonym=ECK1425;gene_synonym=JW5227;gene_synonym=JW5961;gene_synonym=orf1;gene_synonym=orfA;gene_synonym=tnpA;gene_synonym=yncK;pseudo=true;db_xref=EcoGene:EG14359 EMBL CDS 1503218 1503649 . - 0 ID=.3137;gene=insP;locus_tag=b4578;gene_synonym=ECK1425;gene_synonym=JW5227;gene_synonym=JW5961;gene_synonym=orf1;gene_synonym=orfA;gene_synonym=tnpA;gene_synonym=yncK;note=pseudogene%2C IS609 transposase A%3BIS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0285051;db_xref=ASAP:ABE-0285052;db_xref=ASAP:ABE-0285110;db_xref=EcoGene:EG14359 EMBL gene 1503717 1504865 . + . ID=.3138;gene=insQ;locus_tag=b1432;gene_synonym=ECK1426;gene_synonym=JW5228;gene_synonym=orf2;gene_synonym=orfB;gene_synonym=tnpB;gene_synonym=ydcM;db_xref=EcoGene:EG13756 EMBL CDS 1503717 1504865 . + 0 ID=.3139;gene=insQ;locus_tag=b1432;gene_synonym=ECK1426;gene_synonym=JW5228;gene_synonym=orf2;gene_synonym=orfB;gene_synonym=tnpB;gene_synonym=ydcM;function=IS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;codon_start=1;transl_table=11;product=IS609 transposase B;protein_id=AAC74514.2;db_xref=GI:288549314;db_xref=ASAP:ABE-0004778;db_xref=UniProtKB/Swiss-Prot:P76102;db_xref=EcoGene:EG13756 EMBL gene 1504905 1506080 . - . ID=.3140;gene=ydcO;locus_tag=b1433;gene_synonym=ECK1427;gene_synonym=JW5229;db_xref=EcoGene:EG13758 EMBL CDS 1504905 1506080 . - 0 ID=.3141;gene=ydcO;locus_tag=b1433;gene_synonym=ECK1427;gene_synonym=JW5229;function=putative transport%3B Not classified;note=putative membrane transport protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=BenE family inner membrane putative transporter;protein_id=AAC74515.2;db_xref=GI:87081909;db_xref=ASAP:ABE-0004780;db_xref=UniProtKB/Swiss-Prot:P76103;db_xref=EcoGene:EG13758 EMBL gene 1506172 1506708 . + . ID=.3142;gene=ydcN;locus_tag=b1434;gene_synonym=ECK1428;gene_synonym=JW1430;db_xref=EcoGene:EG13757 EMBL CDS 1506172 1506708 . + 0 ID=.3143;gene=ydcN;locus_tag=b1434;gene_synonym=ECK1428;gene_synonym=JW1430;function=putative regulator%3B Not classified;codon_start=1;transl_table=11;product=putative DNA-binding transcriptional regulator;protein_id=AAC74516.1;db_xref=GI:1787704;db_xref=ASAP:ABE-0004783;db_xref=UniProtKB/Swiss-Prot:P77626;db_xref=EcoGene:EG13757 EMBL gene 1506781 1508742 . + . ID=.3144;gene=ydcP;locus_tag=b1435;gene_synonym=ECK1429;gene_synonym=JW1431;db_xref=EcoGene:EG13759 EMBL CDS 1506781 1508742 . + 0 ID=.3145;gene=ydcP;locus_tag=b1435;gene_synonym=ECK1429;gene_synonym=JW1431;function=putative enzyme%3B Not classified;note=putative protease;codon_start=1;transl_table=11;product=putative peptidase;protein_id=AAC74517.2;db_xref=GI:87081910;db_xref=ASAP:ABE-0004786;db_xref=UniProtKB/Swiss-Prot:P76104;db_xref=EcoGene:EG13759 EMBL repeat_region 1508791 1508823 . + . ID=.3146;note=REP117 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 1508834 1509064 . - . ID=.3147;gene=yncJ;locus_tag=b1436;gene_synonym=ECK1430;gene_synonym=JW1432;db_xref=EcoGene:EG14300 EMBL CDS 1508834 1509064 . - 0 ID=.3148;gene=yncJ;locus_tag=b1436;gene_synonym=ECK1430;gene_synonym=JW1432;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC74518.1;db_xref=GI:1787707;db_xref=ASAP:ABE-0004789;db_xref=UniProtKB/Swiss-Prot:P64459;db_xref=EcoGene:EG14300 EMBL gene 1509286 1509462 . + . ID=.3149;gene=hicA;locus_tag=b4532;gene_synonym=ECK1431;gene_synonym=JW5230;gene_synonym=yncN;db_xref=EcoGene:EG14421 EMBL CDS 1509286 1509462 . + 0 ID=.3150;gene=hicA;locus_tag=b4532;gene_synonym=ECK1431;gene_synonym=JW5230;gene_synonym=yncN;codon_start=1;transl_table=11;product=mRNA interferase toxin of the HicAB toxin-antitoxin system;protein_id=AAC74519.2;db_xref=GI:87081911;db_xref=ASAP:ABE-0285053;db_xref=UniProtKB/Swiss-Prot:P76106;db_xref=EcoGene:EG14421 EMBL gene 1509508 1509924 . + . ID=.3151;gene=hicB;locus_tag=b1438;gene_synonym=ECK1432;gene_synonym=JW1433;gene_synonym=ydcQ;db_xref=EcoGene:EG13760 EMBL CDS 1509508 1509924 . + 0 ID=.3152;gene=hicB;locus_tag=b1438;gene_synonym=ECK1432;gene_synonym=JW1433;gene_synonym=ydcQ;codon_start=1;transl_table=11;product=antitoxin for the HicAB toxin-antitoxin system;protein_id=AAC74520.2;db_xref=GI:145693129;db_xref=ASAP:ABE-0004796;db_xref=UniProtKB/Swiss-Prot:P67697;db_xref=EcoGene:EG13760 EMBL gene 1510003 1511409 . + . ID=.3153;gene=ydcR;locus_tag=b1439;gene_synonym=ECK1433;gene_synonym=JW1434;db_xref=EcoGene:EG13761 EMBL CDS 1510003 1511409 . + 0 ID=.3154;gene=ydcR;locus_tag=b1439;gene_synonym=ECK1433;gene_synonym=JW1434;function=putative regulator%3B Not classified;note=multi modular%3B putative transcriptional regulator%3B also putative ATP-binding component of a transport system%3B GO_function: GO:0004009 - ATP-binding cassette (ABC) transporter activity%3B GO_process: GO:0006355 - regulation of transcription%2C DNA-dependent;codon_start=1;transl_table=11;product=putative DNA-binding transcriptional regulator and putative aminotransferase;protein_id=AAC74521.1;db_xref=GI:1787710;db_xref=ASAP:ABE-0004800;db_xref=UniProtKB/Swiss-Prot:P77730;db_xref=EcoGene:EG13761 EMBL gene 1511654 1512799 . + . ID=.3155;gene=ydcS;locus_tag=b1440;gene_synonym=ECK1434;gene_synonym=JW1435;db_xref=EcoGene:EG13762 EMBL CDS 1511654 1512799 . + 0 ID=.3156;gene=ydcS;locus_tag=b1440;gene_synonym=ECK1434;gene_synonym=JW1435;function=enzyme%3B Not classified;note=periplasmic-binding component of ABC superfamily%3B GO_component: GO:0042597 - periplasmic space;codon_start=1;transl_table=11;product=putative ABC transporter periplasmic binding protein;protein_id=AAC74522.1;db_xref=GI:1787711;db_xref=ASAP:ABE-0004803;db_xref=UniProtKB/Swiss-Prot:P76108;db_xref=EcoGene:EG13762 EMBL gene 1512817 1513830 . + . ID=.3157;gene=ydcT;locus_tag=b1441;gene_synonym=ECK1435;gene_synonym=JW1436;db_xref=EcoGene:EG13763 EMBL CDS 1512817 1513830 . + 0 ID=.3158;gene=ydcT;locus_tag=b1441;gene_synonym=ECK1435;gene_synonym=JW1436;function=putative transport%3B Not classified;note=ATP-binding component of ABC superfamily%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=putative ABC transporter ATPase;protein_id=AAC74523.1;db_xref=GI:1787712;db_xref=ASAP:ABE-0004805;db_xref=UniProtKB/Swiss-Prot:P77795;db_xref=EcoGene:EG13763 EMBL gene 1513831 1514772 . + . ID=.3159;gene=ydcU;locus_tag=b1442;gene_synonym=ECK1436;gene_synonym=JW1437;db_xref=EcoGene:EG13764 EMBL CDS 1513831 1514772 . + 0 ID=.3160;gene=ydcU;locus_tag=b1442;gene_synonym=ECK1436;gene_synonym=JW1437;function=putative transport%3B Not classified;note=membrane component of ABC superfamily%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative ABC transporter permease;protein_id=AAC74524.1;db_xref=GI:1787713;db_xref=ASAP:ABE-0004807;db_xref=UniProtKB/Swiss-Prot:P77156;db_xref=EcoGene:EG13764 EMBL gene 1514762 1515556 . + . ID=.3161;gene=ydcV;locus_tag=b1443;gene_synonym=ECK1437;gene_synonym=JW1438;db_xref=EcoGene:EG13765 EMBL CDS 1514762 1515556 . + 0 ID=.3162;gene=ydcV;locus_tag=b1443;gene_synonym=ECK1437;gene_synonym=JW1438;function=putative transport%3B Not classified;note=membrane component of ABC superfamily%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative ABC transporter permease;protein_id=AAC74525.1;db_xref=GI:1787714;db_xref=ASAP:ABE-0004809;db_xref=UniProtKB/Swiss-Prot:P0AFR9;db_xref=EcoGene:EG13765 EMBL gene 1515578 1517002 . + . ID=.3163;gene=patD;locus_tag=b1444;gene_synonym=ECK1438;gene_synonym=JW1439;gene_synonym=prr;gene_synonym=ydcW;db_xref=EcoGene:EG13766 EMBL CDS 1515578 1517002 . + 0 ID=.3164;gene=patD;locus_tag=b1444;gene_synonym=ECK1438;gene_synonym=JW1439;gene_synonym=prr;gene_synonym=ydcW;function=putative enzyme%3B Not classified;note=putative aldehyde dehydrogenase;codon_start=1;transl_table=11;product=gamma-aminobutyraldehyde dehydrogenase;protein_id=AAC74526.1;db_xref=GI:1787715;db_xref=ASAP:ABE-0004813;db_xref=UniProtKB/Swiss-Prot:P77674;db_xref=EcoGene:EG13766 EMBL gene 1517099 1517194 . - . ID=.3165;gene=yncL;locus_tag=b4598;gene_synonym=ECK4408;db_xref=EcoGene:EG14394 EMBL CDS 1517099 1517194 . - 0 ID=.3166;gene=yncL;locus_tag=b4598;gene_synonym=ECK4408;codon_start=1;transl_table=11;product=stress-induced small inner membrane enterobacterial protein;protein_id=ABP93444.1;db_xref=GI:145693130;db_xref=UniProtKB/Swiss-Prot:A5A615;db_xref=EcoGene:EG14394 EMBL gene 1517389 1517562 . + . ID=.3167;gene=ydcX;locus_tag=b1445;gene_synonym=ECK1439;gene_synonym=JW5232;db_xref=EcoGene:EG13767 EMBL CDS 1517389 1517562 . + 0 ID=.3168;gene=ydcX;locus_tag=b1445;gene_synonym=ECK1439;gene_synonym=JW5232;codon_start=1;transl_table=11;product=DUF2566 family protein;protein_id=AAC74527.2;db_xref=GI:87081912;db_xref=ASAP:ABE-0004818;db_xref=UniProtKB/Swiss-Prot:P64453;db_xref=EcoGene:EG13767 EMBL gene 1517648 1517881 . + . ID=.3169;gene=ydcY;locus_tag=b1446;gene_synonym=ECK1440;gene_synonym=JW1441;db_xref=EcoGene:EG13768 EMBL CDS 1517648 1517881 . + 0 ID=.3170;gene=ydcY;locus_tag=b1446;gene_synonym=ECK1440;gene_synonym=JW1441;codon_start=1;transl_table=11;product=DUF2526 family protein;protein_id=AAC74528.1;db_xref=GI:1787717;db_xref=ASAP:ABE-0004821;db_xref=UniProtKB/Swiss-Prot:P64455;db_xref=EcoGene:EG13768 EMBL gene 1517882 1518331 . - . ID=.3171;gene=ydcZ;locus_tag=b1447;gene_synonym=ECK1441;gene_synonym=JW1442;db_xref=EcoGene:EG13769 EMBL CDS 1517882 1518331 . - 0 ID=.3172;gene=ydcZ;locus_tag=b1447;gene_synonym=ECK1441;gene_synonym=JW1442;codon_start=1;transl_table=11;product=DUF606 family inner membrane protein;protein_id=AAC74529.1;db_xref=GI:1787718;db_xref=ASAP:ABE-0004823;db_xref=UniProtKB/Swiss-Prot:P76111;db_xref=EcoGene:EG13769 EMBL gene 1518328 1518846 . - . ID=.3173;gene=mnaT;locus_tag=b1448;gene_synonym=ECK1442;gene_synonym=JW5233;gene_synonym=yncA;db_xref=EcoGene:EG13770 EMBL CDS 1518328 1518846 . - 0 ID=.3174;gene=mnaT;locus_tag=b1448;gene_synonym=ECK1442;gene_synonym=JW5233;gene_synonym=yncA;function=enzyme%3B Proteins - translation and modification;note=GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=methionine N-acyltransferase%3B L-amino acid N-acyltransferase;protein_id=AAC74530.1;db_xref=GI:1787719;db_xref=ASAP:ABE-0004827;db_xref=UniProtKB/Swiss-Prot:P76112;db_xref=EcoGene:EG13770 EMBL gene 1519027 1520064 . + . ID=.3175;gene=curA;locus_tag=b1449;gene_synonym=ECK1443;gene_synonym=JW5907;gene_synonym=yncB;db_xref=EcoGene:EG13772 EMBL CDS 1519027 1520064 . + 0 ID=.3176;gene=curA;locus_tag=b1449;gene_synonym=ECK1443;gene_synonym=JW5907;gene_synonym=yncB;function=enzyme%3B Not classified;note=putative oxidoreductase;codon_start=1;transl_table=11;product=curcumin/dihydrocurcumin reductase%2C NADPH-dependent;protein_id=AAC74531.4;db_xref=GI:226510941;db_xref=ASAP:ABE-0004834;db_xref=UniProtKB/Swiss-Prot:P76113;db_xref=EcoGene:EG13772 EMBL gene 1520262 1520927 . + . ID=.3177;gene=mcbR;locus_tag=b1450;gene_synonym=ECK1444;gene_synonym=JW1445;gene_synonym=yncC;db_xref=EcoGene:EG13773 EMBL CDS 1520262 1520927 . + 0 ID=.3178;gene=mcbR;locus_tag=b1450;gene_synonym=ECK1444;gene_synonym=JW1445;gene_synonym=yncC;function=putative regulator%3B Not classified;note=GO_process: GO:0006350 - transcription%3B GO_process: GO:0006355 - regulation of transcription%2C DNA-dependent;codon_start=1;transl_table=11;product=colanic acid and biofilm gene transcriptional regulator%2C MqsR-controlled;protein_id=AAC74532.2;db_xref=GI:87081914;db_xref=ASAP:ABE-0004837;db_xref=UniProtKB/Swiss-Prot:P76114;db_xref=EcoGene:EG13773 EMBL gene 1520963 1523065 . - . ID=.3179;gene=yncD;locus_tag=b1451;gene_synonym=ECK1445;gene_synonym=JW1446;db_xref=EcoGene:EG13774 EMBL CDS 1520963 1523065 . - 0 ID=.3180;gene=yncD;locus_tag=b1451;gene_synonym=ECK1445;gene_synonym=JW1446;function=putative transport%3B Not classified;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane;codon_start=1;transl_table=11;product=putative iron outer membrane transporter;protein_id=AAC74533.1;db_xref=GI:1787723;db_xref=ASAP:ABE-0004839;db_xref=UniProtKB/Swiss-Prot:P76115;db_xref=EcoGene:EG13774 EMBL gene 1523307 1524368 . + . ID=.3181;gene=yncE;locus_tag=b1452;gene_synonym=ECK1446;gene_synonym=JW1447;db_xref=EcoGene:EG13775 EMBL CDS 1523307 1524368 . + 0 ID=.3182;gene=yncE;locus_tag=b1452;gene_synonym=ECK1446;gene_synonym=JW1447;function=putative factor%3B Not classified;note=putative receptor;codon_start=1;transl_table=11;product=ATP-binding protein%2C periplasmic%2C function unknown;protein_id=AAC74534.1;db_xref=GI:1787724;db_xref=ASAP:ABE-0004843;db_xref=UniProtKB/Swiss-Prot:P76116;db_xref=EcoGene:EG13775 EMBL gene 1524481 1525980 . - . ID=.3183;gene=ansP;locus_tag=b1453;gene_synonym=ECK1447;gene_synonym=JW5234;gene_synonym=yncF;db_xref=EcoGene:EG13776 EMBL CDS 1524481 1525980 . - 0 ID=.3184;gene=ansP;locus_tag=b1453;gene_synonym=ECK1447;gene_synonym=JW5234;gene_synonym=yncF;function=transport%3B Transport of small molecules: Amino acids%2C amines;note=L-asparagine permease%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006529 - asparagine biosynthetic process;codon_start=1;transl_table=11;product=L-asparagine transporter;protein_id=AAC74535.2;db_xref=GI:87081915;db_xref=ASAP:ABE-0004845;db_xref=UniProtKB/Swiss-Prot:P77610;db_xref=EcoGene:EG13776 EMBL gene 1526247 1526864 . + . ID=.3185;gene=yncG;locus_tag=b1454;gene_synonym=ECK1448;gene_synonym=JW1449;db_xref=EcoGene:EG13777 EMBL CDS 1526247 1526864 . + 0 ID=.3186;gene=yncG;locus_tag=b1454;gene_synonym=ECK1448;gene_synonym=JW1449;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=glutathione S-transferase homolog;protein_id=AAC74536.1;db_xref=GI:1787726;db_xref=ASAP:ABE-0004851;db_xref=UniProtKB/Swiss-Prot:P76117;db_xref=EcoGene:EG13777 EMBL gene 1526940 1527152 . + . ID=.3187;gene=yncH;locus_tag=b1455;gene_synonym=ECK1449;gene_synonym=JW5235;db_xref=EcoGene:EG13778 EMBL CDS 1526940 1527152 . + 0 ID=.3188;gene=yncH;locus_tag=b1455;gene_synonym=ECK1449;gene_synonym=JW5235;codon_start=1;transl_table=11;product=IPR020099 family protein;protein_id=AAC74537.1;db_xref=GI:1787727;db_xref=ASAP:ABE-0004855;db_xref=UniProtKB/Swiss-Prot:P76118;db_xref=EcoGene:EG13778 EMBL gene 1527902 1529938 . + . ID=.3189;gene=rhsE;locus_tag=b1456;gene_synonym=ECK1450;gene_synonym=JW1451;pseudo=true;db_xref=EcoGene:EG10010 EMBL CDS 1527902 1529938 . + 0 ID=.3190;gene=rhsE;locus_tag=b1456;gene_synonym=ECK1450;gene_synonym=JW1451;note=pseudogene%2C Rhs family;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0004858;db_xref=UniProtKB/Swiss-Prot:P24211;db_xref=EcoGene:EG10010 EMBL gene 1529922 1530404 . + . ID=.3191;gene=ydcD;locus_tag=b1457;gene_synonym=ECK1451;gene_synonym=JW1452;db_xref=EcoGene:EG11760 EMBL CDS 1529922 1530404 . + 0 ID=.3192;gene=ydcD;locus_tag=b1457;gene_synonym=ECK1451;gene_synonym=JW1452;codon_start=1;transl_table=11;product=putative immunity protein for RhsE;protein_id=AAC74539.1;db_xref=GI:1787729;db_xref=ASAP:ABE-0004861;db_xref=UniProtKB/Swiss-Prot:P31991;db_xref=EcoGene:EG11760 EMBL gene 1530586 1531639 . + . ID=.3193;gene=yncI;locus_tag=b1459;gene_synonym=ECK1452;gene_synonym=JW1453;gene_synonym=yncM;pseudo=true;db_xref=EcoGene:EG14258 EMBL biological_region 1530586 1531639 . + 0 ID=.3194;featflags=type:CDS;gene=yncI;locus_tag=b1459;gene_synonym=ECK1452;gene_synonym=JW1453;gene_synonym=yncM;note=pseudogene;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0004865;db_xref=ASAP:ABE-0004868;db_xref=UniProtKB/Swiss-Prot:P76119;db_xref=EcoGene:EG14258 EMBL CDS 1530586 1531323 . + 0 Parent=.3194 EMBL CDS 1531325 1531639 . + 0 Parent=.3194 EMBL gene 1531816 1532952 . + . ID=.3197;gene=ydcC;locus_tag=b1460;gene_synonym=ECK1454;gene_synonym=JW1455;db_xref=EcoGene:EG11526 EMBL CDS 1531816 1532952 . + 0 ID=.3198;gene=ydcC;locus_tag=b1460;gene_synonym=ECK1454;gene_synonym=JW1455;function=putative enzyme%3B Not classified;note=H repeat-associated protein (ORF-H);codon_start=1;transl_table=11;product=H repeat-associated putative transposase;protein_id=AAC74542.1;db_xref=GI:1787733;db_xref=ASAP:ABE-0004872;db_xref=UniProtKB/Swiss-Prot:P28917;db_xref=EcoGene:EG11526 EMBL gene 1533052 1533285 . + . ID=.3199;gene=pptA;locus_tag=b1461;gene_synonym=ECK1455;gene_synonym=JW1456;gene_synonym=ydcE;db_xref=EcoGene:EG11761 EMBL CDS 1533052 1533285 . + 0 ID=.3200;gene=pptA;locus_tag=b1461;gene_synonym=ECK1455;gene_synonym=JW1456;gene_synonym=ydcE;ec_number=5.3.2.-;codon_start=1;transl_table=11;product=4-oxalocrotonate tautomerase;protein_id=AAC74543.1;db_xref=GI:1787734;db_xref=ASAP:ABE-0004875;db_xref=UniProtKB/Swiss-Prot:P31992;db_xref=EcoGene:EG11761 EMBL gene 1533282 1533851 . - . ID=.3201;gene=yddH;locus_tag=b1462;gene_synonym=ECK1456;gene_synonym=JW1457;db_xref=EcoGene:EG13779 EMBL CDS 1533282 1533851 . - 0 ID=.3202;gene=yddH;locus_tag=b1462;gene_synonym=ECK1456;gene_synonym=JW1457;codon_start=1;transl_table=11;product=flavin reductase like-protein;protein_id=AAC74544.2;db_xref=GI:87081916;db_xref=ASAP:ABE-0004877;db_xref=UniProtKB/Swiss-Prot:P76121;db_xref=EcoGene:EG13779 EMBL gene 1534024 1534869 . + . ID=.3203;gene=nhoA;locus_tag=b1463;gene_synonym=ECK1457;gene_synonym=JW1458;gene_synonym=yddI;db_xref=EcoGene:EG13780 EMBL CDS 1534024 1534869 . + 0 ID=.3204;gene=nhoA;locus_tag=b1463;gene_synonym=ECK1457;gene_synonym=JW1458;gene_synonym=yddI;ec_number=2.3.1.118;note=GO_process: GO:0008152 - metabolic process;codon_start=1;transl_table=11;product=N-hydroxyarylamine O-acetyltransferase;protein_id=AAC74545.1;db_xref=GI:1787736;db_xref=ASAP:ABE-0004882;db_xref=UniProtKB/Swiss-Prot:P77567;db_xref=EcoGene:EG13780 EMBL repeat_region 1534883 1534957 . + . ID=.3205;note=REP118 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 1534965 1535858 . - . ID=.3206;gene=yddE;locus_tag=b1464;gene_synonym=ECK1458;gene_synonym=JW1459;db_xref=EcoGene:EG11825 EMBL CDS 1534965 1535858 . - 0 ID=.3207;gene=yddE;locus_tag=b1464;gene_synonym=ECK1458;gene_synonym=JW1459;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=PhzC-PhzF family protein;protein_id=AAC74546.1;db_xref=GI:1787737;db_xref=ASAP:ABE-0004886;db_xref=UniProtKB/Swiss-Prot:P37757;db_xref=EcoGene:EG11825 EMBL gene 1535937 1536617 . - . ID=.3208;gene=narV;locus_tag=b1465;gene_synonym=chlZ;gene_synonym=ECK1459;gene_synonym=JW1460;db_xref=EcoGene:EG10644 EMBL CDS 1535937 1536617 . - 0 ID=.3209;gene=narV;locus_tag=b1465;gene_synonym=chlZ;gene_synonym=ECK1459;gene_synonym=JW1460;ec_number=1.7.99.4;function=enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=nitrate reductase 2 (NRZ)%2C gamma subunit;protein_id=AAC74547.1;db_xref=GI:1787738;db_xref=ASAP:ABE-0004889;db_xref=UniProtKB/Swiss-Prot:P0AF32;db_xref=EcoGene:EG10644 EMBL gene 1536614 1537309 . - . ID=.3210;gene=narW;locus_tag=b1466;gene_synonym=chlZ;gene_synonym=ECK1460;gene_synonym=JW1461;db_xref=EcoGene:EG10645 EMBL CDS 1536614 1537309 . - 0 ID=.3211;gene=narW;locus_tag=b1466;gene_synonym=chlZ;gene_synonym=ECK1460;gene_synonym=JW1461;ec_number=1.7.99.4;function=enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;note=GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=nitrate reductase 2 (NRZ)%2C delta subunit (assembly subunit);protein_id=AAC74548.1;db_xref=GI:1787739;db_xref=ASAP:ABE-0004892;db_xref=UniProtKB/Swiss-Prot:P19317;db_xref=EcoGene:EG10645 EMBL gene 1537309 1538853 . - . ID=.3212;gene=narY;locus_tag=b1467;gene_synonym=chlZ;gene_synonym=ECK1461;gene_synonym=JW1462;db_xref=EcoGene:EG10647 EMBL CDS 1537309 1538853 . - 0 ID=.3213;gene=narY;locus_tag=b1467;gene_synonym=chlZ;gene_synonym=ECK1461;gene_synonym=JW1462;ec_number=1.7.99.4;function=enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;experiment=N-terminus verified by Edman degradation: PMID 2233673;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=nitrate reductase 2 (NRZ)%2C beta subunit;protein_id=AAC74549.1;db_xref=GI:1787740;db_xref=ASAP:ABE-0004896;db_xref=UniProtKB/Swiss-Prot:P19318;db_xref=EcoGene:EG10647 EMBL gene 1538850 1542590 . - . ID=.3214;gene=narZ;locus_tag=b1468;gene_synonym=chlZ;gene_synonym=ECK1462;gene_synonym=JW1463;db_xref=EcoGene:EG10648 EMBL CDS 1538850 1542590 . - 0 ID=.3215;gene=narZ;locus_tag=b1468;gene_synonym=chlZ;gene_synonym=ECK1462;gene_synonym=JW1463;ec_number=1.7.99.4;function=enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=nitrate reductase 2 (NRZ)%2C alpha subunit;protein_id=AAC74550.1;db_xref=GI:1787741;db_xref=ASAP:ABE-0004898;db_xref=UniProtKB/Swiss-Prot:P19319;db_xref=EcoGene:EG10648 EMBL repeat_region 1542634 1542662 . + . ID=.3216;note=REP119 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 1542672 1544060 . - . ID=.3217;gene=narU;locus_tag=b1469;gene_synonym=ECK1463;gene_synonym=JW1464;gene_synonym=yddF;db_xref=EcoGene:EG12153 EMBL CDS 1542672 1544060 . - 0 ID=.3218;gene=narU;locus_tag=b1469;gene_synonym=ECK1463;gene_synonym=JW1464;gene_synonym=yddF;function=transport%3B Transport of small molecules: Anions;note=nitrite extrusion protein 2%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006807 - nitrogen compound metabolic process;codon_start=1;transl_table=11;product=nitrate/nitrite transporter;protein_id=AAD13433.1;db_xref=GI:1787743;db_xref=ASAP:ABE-0004901;db_xref=UniProtKB/Swiss-Prot:P37758;db_xref=EcoGene:EG12153 EMBL gene 1544384 1545714 . - . ID=.3219;gene=yddK;locus_tag=b1471;gene_synonym=ECK1465;gene_synonym=JW1467;gene_synonym=yddJ;pseudo=true;db_xref=EcoGene:EG13782 EMBL biological_region 1544384 1545714 . - 0 ID=.3220;featflags=type:CDS;gene=yddK;locus_tag=b1471;gene_synonym=ECK1465;gene_synonym=JW1467;gene_synonym=yddJ;note=pseudogene%2C leucine-rich protein%3B putative glycoportein%3B GO_process: GO:0009101 - glycoprotein biosynthetic process;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0004906;db_xref=UniProtKB/Swiss-Prot:P76123;db_xref=EcoGene:EG13782 EMBL CDS 1544384 1544764 . - 0 Parent=.3220 EMBL CDS 1544764 1545714 . - 0 Parent=.3220 EMBL gene 1545750 1546028 . - . ID=.3223;gene=yddL;locus_tag=b1472;gene_synonym=ECK1466;gene_synonym=JW1468;pseudo=true;db_xref=EcoGene:EG13783 EMBL CDS 1545750 1546028 . - 0 ID=.3224;gene=yddL;locus_tag=b1472;gene_synonym=ECK1466;gene_synonym=JW1468;note=putative lipoprotein%3Bputative membrane%3B Not classified%3B putative outer membrane porin protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0004910;db_xref=UniProtKB/Swiss-Prot:P77519;db_xref=EcoGene:EG13783 EMBL gene 1546288 1547169 . - . ID=.3225;gene=yddG;locus_tag=b1473;gene_synonym=ECK1467;gene_synonym=JW1469;db_xref=EcoGene:EG12713 EMBL CDS 1546288 1547169 . - 0 ID=.3226;gene=yddG;locus_tag=b1473;gene_synonym=ECK1467;gene_synonym=JW1469;note=GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=aromatic amino acid exporter;protein_id=AAD13437.3;db_xref=GI:145693132;db_xref=ASAP:ABE-0004912;db_xref=UniProtKB/Swiss-Prot:P46136;db_xref=EcoGene:EG12713 EMBL gene 1547401 1550448 . + . ID=.3227;gene=fdnG;locus_tag=b1474;gene_synonym=ECK1468;gene_synonym=JW1470;db_xref=EcoGene:EG11227 EMBL CDS 1547401 1550448 . + 0 ID=.3228;gene=fdnG;locus_tag=b1474;gene_synonym=ECK1468;gene_synonym=JW1470;ec_number=1.2.1.2;function=enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;note=formate dehydrogenase-N%2C nitrate-inducible%2C alpha subunit%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_except=(pos:1547986..1547988%2Caa:Sec);transl_table=11;product=formate dehydrogenase-N%2C alpha subunit%2C nitrate-inducible;protein_id=AAD13438.1;db_xref=GI:3868719;db_xref=ASAP:ABE-0004917;db_xref=UniProtKB/Swiss-Prot:P24183;db_xref=EcoGene:EG11227 EMBL gene 1550461 1551345 . + . ID=.3229;gene=fdnH;locus_tag=b1475;gene_synonym=ECK1469;gene_synonym=JW1471;db_xref=EcoGene:EG11228 EMBL CDS 1550461 1551345 . + 0 ID=.3230;gene=fdnH;locus_tag=b1475;gene_synonym=ECK1469;gene_synonym=JW1471;function=enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;note=formate dehydrogenase-N%2C nitrate-inducible%2C iron-sulfur beta subunit%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=formate dehydrogenase-N%2C Fe-S (beta) subunit%2C nitrate-inducible;protein_id=AAD13439.1;db_xref=GI:1787749;db_xref=ASAP:ABE-0004919;db_xref=UniProtKB/Swiss-Prot:P0AAJ3;db_xref=EcoGene:EG11228 EMBL gene 1551338 1551991 . + . ID=.3231;gene=fdnI;locus_tag=b1476;gene_synonym=ECK1470;gene_synonym=JW1472;db_xref=EcoGene:EG11229 EMBL CDS 1551338 1551991 . + 0 ID=.3232;gene=fdnI;locus_tag=b1476;gene_synonym=ECK1470;gene_synonym=JW1472;function=enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;note=formate dehydrogenase-N%2C nitrate-inducible%2C cytochrome B556(Fdn) gamma subunit%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0017004 - cytochrome complex assembly;codon_start=1;transl_table=11;product=formate dehydrogenase-N%2C cytochrome B556 (gamma) subunit%2C nitrate-inducible;protein_id=AAD13440.1;db_xref=GI:1787750;db_xref=ASAP:ABE-0004921;db_xref=UniProtKB/Swiss-Prot:P0AEK7;db_xref=EcoGene:EG11229 EMBL repeat_region 1552071 1552167 . + . ID=.3233;note=RIP120 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL repeat_region 1552249 1552345 . + . ID=.3234;note=RIP121 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 1552398 1552682 . - . ID=.3235;gene=yddM;locus_tag=b1477;gene_synonym=ECK1471;gene_synonym=JW5908;db_xref=EcoGene:EG13784 EMBL CDS 1552398 1552682 . - 0 ID=.3236;gene=yddM;locus_tag=b1477;gene_synonym=ECK1471;gene_synonym=JW5908;note=GO_process: GO:0006355 - regulation of transcription%2C DNA-dependent;codon_start=1;transl_table=11;product=putative DNA-binding transcriptional regulator;protein_id=AAD13441.2;db_xref=GI:145693133;db_xref=ASAP:ABE-0004925;db_xref=UniProtKB/Swiss-Prot:P67699;db_xref=EcoGene:EG13784 EMBL gene 1552828 1553838 . - . ID=.3237;gene=adhP;locus_tag=b1478;gene_synonym=ECK1472;gene_synonym=JW1474;gene_synonym=yddN;db_xref=EcoGene:EG12622 EMBL CDS 1552828 1553838 . - 0 ID=.3238;gene=adhP;locus_tag=b1478;gene_synonym=ECK1472;gene_synonym=JW1474;gene_synonym=yddN;ec_number=1.1.1.1;function=enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;note=alcohol dehydrogenase%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=ethanol-active dehydrogenase/acetaldehyde-active reductase;protein_id=AAC74551.2;db_xref=GI:87081918;db_xref=ASAP:ABE-0004928;db_xref=UniProtKB/Swiss-Prot:P39451;db_xref=EcoGene:EG12622 EMBL gene 1553972 1555669 . - . ID=.3239;gene=maeA;locus_tag=b1479;gene_synonym=ECK1473;gene_synonym=JW5238;gene_synonym=sfcA;db_xref=EcoGene:EG10948 EMBL CDS 1553972 1555669 . - 0 ID=.3240;gene=maeA;locus_tag=b1479;gene_synonym=ECK1473;gene_synonym=JW5238;gene_synonym=sfcA;ec_number=1.1.1.38;function=enzyme%3B Central intermediary metabolism: Gluconeogenesis;note=NAD-linked malate dehydrogenase (malic enzyme)%3B GO_process: GO:0006094 - gluconeogenesis;codon_start=1;transl_table=11;product=malate dehydrogenase%2C decarboxylating%2C NAD-requiring%3B malic enzyme;protein_id=AAC74552.2;db_xref=GI:87081919;db_xref=ASAP:ABE-0004931;db_xref=UniProtKB/Swiss-Prot:P26616;db_xref=EcoGene:EG10948 EMBL gene 1555826 1555963 . - . ID=.3241;gene=sra;locus_tag=b1480;gene_synonym=ECK1474;gene_synonym=JW5962;gene_synonym=rpsV;db_xref=EcoGene:EG11508 EMBL CDS 1555826 1555963 . - 0 ID=.3242;gene=sra;locus_tag=b1480;gene_synonym=ECK1474;gene_synonym=JW5962;gene_synonym=rpsV;function=structural component%3B Ribosomal proteins - synthesis%2C modification;experiment=N-terminus verified by Edman degradation: PMID 11292794;note=stationary phase-induced ribosome-associated protein%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0003735 - structural constituent of ribosome%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=stationary-phase-induced ribosome-associated protein;protein_id=AAC74553.1;db_xref=GI:1787755;db_xref=ASAP:ABE-0004935;db_xref=UniProtKB/Swiss-Prot:P68191;db_xref=EcoGene:EG11508 EMBL gene 1556065 1556280 . - . ID=.3243;gene=bdm;locus_tag=b1481;gene_synonym=ECK1475;gene_synonym=JW5239;gene_synonym=yddX;db_xref=EcoGene:EG14301 EMBL CDS 1556065 1556280 . - 0 ID=.3244;gene=bdm;locus_tag=b1481;gene_synonym=ECK1475;gene_synonym=JW5239;gene_synonym=yddX;codon_start=1;transl_table=11;product=biofilm-dependent modulation protein;protein_id=AAC74554.2;db_xref=GI:87081920;db_xref=ASAP:ABE-0004938;db_xref=UniProtKB/Swiss-Prot:P76127;db_xref=EcoGene:EG14301 EMBL gene 1556625 1557056 . + . ID=.3245;gene=osmC;locus_tag=b1482;gene_synonym=ECK1476;gene_synonym=JW1477;db_xref=EcoGene:EG10680 EMBL CDS 1556625 1557056 . + 0 ID=.3246;gene=osmC;locus_tag=b1482;gene_synonym=ECK1476;gene_synonym=JW1477;function=phenotype%3B Osmotic adaptation;note=osmotically inducible protein%3B GO_process: GO:0006970 - response to osmotic stress;codon_start=1;transl_table=11;product=lipoyl-dependent Cys-based peroxidase%2C hydroperoxide resistance%3B salt-shock inducible membrane protein%3B peroxiredoxin;protein_id=AAC74555.1;db_xref=GI:1787757;db_xref=ASAP:ABE-0004944;db_xref=UniProtKB/Swiss-Prot:P0C0L2;db_xref=EcoGene:EG10680 EMBL repeat_region 1557063 1557081 . + . ID=.3247;note=REP122 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 1557112 1558038 . - . ID=.3248;gene=ddpF;locus_tag=b1483;gene_synonym=ECK1477;gene_synonym=JW1478;gene_synonym=yddO;db_xref=EcoGene:EG13786 EMBL CDS 1557112 1558038 . - 0 ID=.3249;gene=ddpF;locus_tag=b1483;gene_synonym=ECK1477;gene_synonym=JW1478;gene_synonym=yddO;function=putative transport%3B Not classified;note=ATP-binding component of ABC superfamily%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=D%2CD-dipeptide ABC transporter ATPase;protein_id=AAC74556.1;db_xref=GI:1787758;db_xref=ASAP:ABE-0004947;db_xref=UniProtKB/Swiss-Prot:P77622;db_xref=EcoGene:EG13786 EMBL gene 1558031 1559017 . - . ID=.3250;gene=ddpD;locus_tag=b1484;gene_synonym=ECK1478;gene_synonym=JW1479;gene_synonym=yddP;db_xref=EcoGene:EG13787 EMBL CDS 1558031 1559017 . - 0 ID=.3251;gene=ddpD;locus_tag=b1484;gene_synonym=ECK1478;gene_synonym=JW1479;gene_synonym=yddP;function=putative transport%3B Not classified;note=ATP-binding component of ABC superfamily%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=D%2CD-dipeptide ABC transporter ATPase;protein_id=AAC74557.1;db_xref=GI:1787759;db_xref=ASAP:ABE-0004949;db_xref=UniProtKB/Swiss-Prot:P77268;db_xref=EcoGene:EG13787 EMBL gene 1559014 1559910 . - . ID=.3252;gene=ddpC;locus_tag=b1485;gene_synonym=ECK1479;gene_synonym=JW1480;gene_synonym=yddQ;db_xref=EcoGene:EG13788 EMBL CDS 1559014 1559910 . - 0 ID=.3253;gene=ddpC;locus_tag=b1485;gene_synonym=ECK1479;gene_synonym=JW1480;gene_synonym=yddQ;function=putative transport%3B Not classified;note=membrane component of ABC superfamily%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=D%2CD-dipeptide ABC transporter permease;protein_id=AAC74558.1;db_xref=GI:1787760;db_xref=ASAP:ABE-0004953;db_xref=UniProtKB/Swiss-Prot:P77463;db_xref=EcoGene:EG13788 EMBL gene 1559907 1560929 . - . ID=.3254;gene=ddpB;locus_tag=b1486;gene_synonym=ECK1480;gene_synonym=JW1481;gene_synonym=yddR;db_xref=EcoGene:EG13789 EMBL CDS 1559907 1560929 . - 0 ID=.3255;gene=ddpB;locus_tag=b1486;gene_synonym=ECK1480;gene_synonym=JW1481;gene_synonym=yddR;function=putative transport%3B Not classified;note=membrane component of ABC superfamily%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=D%2CD-dipeptide ABC transporter permease;protein_id=AAC74559.1;db_xref=GI:1787761;db_xref=ASAP:ABE-0004955;db_xref=UniProtKB/Swiss-Prot:P77308;db_xref=EcoGene:EG13789 EMBL gene 1560931 1562481 . - . ID=.3256;gene=ddpA;locus_tag=b1487;gene_synonym=ECK1481;gene_synonym=JW5240;gene_synonym=yddS;db_xref=EcoGene:EG13790 EMBL CDS 1560931 1562481 . - 0 ID=.3257;gene=ddpA;locus_tag=b1487;gene_synonym=ECK1481;gene_synonym=JW5240;gene_synonym=yddS;function=putative factor%3B Not classified;note=periplasmic-binding component of ABC superfamily%3B GO_component: GO:0042597 - periplasmic space;codon_start=1;transl_table=11;product=D%2CD-dipeptide ABC transporter periplasmic binding protein;protein_id=AAC74560.1;db_xref=GI:1787762;db_xref=ASAP:ABE-0004958;db_xref=UniProtKB/Swiss-Prot:P76128;db_xref=EcoGene:EG13790 EMBL gene 1562495 1563076 . - . ID=.3258;gene=ddpX;locus_tag=b1488;gene_synonym=ECK1482;gene_synonym=JW1483;gene_synonym=vanX;gene_synonym=yddT;db_xref=EcoGene:EG13791 EMBL CDS 1562495 1563076 . - 0 ID=.3259;gene=ddpX;locus_tag=b1488;gene_synonym=ECK1482;gene_synonym=JW1483;gene_synonym=vanX;gene_synonym=yddT;ec_number=3.4.13.-;note=GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0006970 - response to osmotic stress;codon_start=1;transl_table=11;product=D-ala-D-ala dipeptidase%2C Zn-dependent;protein_id=AAC74561.1;db_xref=GI:1787763;db_xref=ASAP:ABE-0004960;db_xref=UniProtKB/Swiss-Prot:P77790;db_xref=EcoGene:EG13791 EMBL gene 1563334 1565733 . - . ID=.3260;gene=dosP;locus_tag=b1489;gene_synonym=dos;gene_synonym=ECK1483;gene_synonym=JW1484;gene_synonym=yddU;db_xref=EcoGene:EG13792 EMBL CDS 1563334 1565733 . - 0 ID=.3261;gene=dosP;locus_tag=b1489;gene_synonym=dos;gene_synonym=ECK1483;gene_synonym=JW1484;gene_synonym=yddU;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=oxygen sensor%2C c-di-GMP phosphodiesterase%2C heme-regulated%3B cold- and stationary phase-induced bioflim regulator;protein_id=AAC74562.2;db_xref=GI:87081921;db_xref=ASAP:ABE-0004963;db_xref=UniProtKB/Swiss-Prot:P76129;db_xref=EcoGene:EG13792 EMBL gene 1565758 1567140 . - . ID=.3262;gene=dosC;locus_tag=b1490;gene_synonym=ECK1484;gene_synonym=JW5241;gene_synonym=yddV;db_xref=EcoGene:EG13793 EMBL CDS 1565758 1567140 . - 0 ID=.3263;gene=dosC;locus_tag=b1490;gene_synonym=ECK1484;gene_synonym=JW5241;gene_synonym=yddV;codon_start=1;transl_table=11;product=diguanylate cyclase%2C cold- and stationary phase-induced oxygen-dependent biofilm regulator;protein_id=AAC74563.3;db_xref=GI:145693134;db_xref=ASAP:ABE-0004965;db_xref=UniProtKB/Swiss-Prot:P0AA89;db_xref=EcoGene:EG13793 EMBL gene 1567504 1568823 . - . ID=.3264;gene=yddW;locus_tag=b1491;gene_synonym=ECK1485;gene_synonym=JW1486;db_xref=EcoGene:EG13794 EMBL CDS 1567504 1568823 . - 0 ID=.3265;gene=yddW;locus_tag=b1491;gene_synonym=ECK1485;gene_synonym=JW1486;codon_start=1;transl_table=11;product=liprotein%2C glycosyl hydrolase homolog;protein_id=AAC74564.1;db_xref=GI:1787767;db_xref=ASAP:ABE-0004970;db_xref=UniProtKB/Swiss-Prot:P64426;db_xref=EcoGene:EG13794 EMBL gene 1568954 1570489 . - . ID=.3266;gene=gadC;locus_tag=b1492;gene_synonym=acsA;gene_synonym=ECK1486;gene_synonym=JW1487;gene_synonym=xasA;db_xref=EcoGene:EG12456 EMBL CDS 1568954 1570489 . - 0 ID=.3267;gene=gadC;locus_tag=b1492;gene_synonym=acsA;gene_synonym=ECK1486;gene_synonym=JW1487;gene_synonym=xasA;function=putative transport%3B Not classified;note=acid sensitivity protein%2C putative transporter%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=glutamate:gamma-aminobutyric acid antiporter;protein_id=AAC74565.1;db_xref=GI:1787768;db_xref=ASAP:ABE-0004973;db_xref=UniProtKB/Swiss-Prot:P63235;db_xref=EcoGene:EG12456 EMBL gene 1570645 1572045 . - . ID=.3268;gene=gadB;locus_tag=b1493;gene_synonym=ECK1487;gene_synonym=JW1488;db_xref=EcoGene:EG11490 EMBL CDS 1570645 1572045 . - 0 ID=.3269;gene=gadB;locus_tag=b1493;gene_synonym=ECK1487;gene_synonym=JW1488;ec_number=4.1.1.15;function=enzyme%3B Central intermediary metabolism: Pool%2C multipurpose conversions;experiment=N-terminus verified by Edman degradation: PMID 8455549;note=glutamate decarboxylase isozyme%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009063 - cellular amino acid catabolic process%3B GO_process: GO:0006520 - cellular amino acid metabolic process;codon_start=1;transl_table=11;product=glutamate decarboxylase B%2C PLP-dependent;protein_id=AAC74566.1;db_xref=GI:1787769;db_xref=ASAP:ABE-0004976;db_xref=UniProtKB/Swiss-Prot:P69910;db_xref=EcoGene:EG11490 EMBL gene 1572407 1575202 . - . ID=.3270;gene=pqqL;locus_tag=b1494;gene_synonym=ECK1488;gene_synonym=JW1489;gene_synonym=pqqE;gene_synonym=pqqM;gene_synonym=yddC;db_xref=EcoGene:EG11744 EMBL CDS 1572407 1575202 . - 0 ID=.3271;gene=pqqL;locus_tag=b1494;gene_synonym=ECK1488;gene_synonym=JW1489;gene_synonym=pqqE;gene_synonym=pqqM;gene_synonym=yddC;function=putative enzyme%3B Not classified;note=putative zinc protease%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=putative periplasmic M16 family zinc metalloendopeptidase;protein_id=AAC74567.1;db_xref=GI:1787770;db_xref=ASAP:ABE-0004979;db_xref=UniProtKB/Swiss-Prot:P31828;db_xref=EcoGene:EG11744 EMBL gene 1575247 1577619 . - . ID=.3272;gene=yddB;locus_tag=b1495;gene_synonym=ECK1489;gene_synonym=JW1490;db_xref=EcoGene:EG11743 EMBL CDS 1575247 1577619 . - 0 ID=.3273;gene=yddB;locus_tag=b1495;gene_synonym=ECK1489;gene_synonym=JW1490;codon_start=1;transl_table=11;product=putative TonB-dependent outer membrane receptor;protein_id=AAC74568.1;db_xref=GI:1787771;db_xref=ASAP:ABE-0004982;db_xref=UniProtKB/Swiss-Prot:P31827;db_xref=EcoGene:EG11743 EMBL gene 1577657 1579342 . - . ID=.3274;gene=yddA;locus_tag=b1496;gene_synonym=ECK1490;gene_synonym=JW5242;db_xref=EcoGene:EG11742 EMBL CDS 1577657 1579342 . - 0 ID=.3275;gene=yddA;locus_tag=b1496;gene_synonym=ECK1490;gene_synonym=JW5242;function=putative transport%3B Not classified;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative multidrug ABC transporter permease/ATPase;protein_id=AAC74569.1;db_xref=GI:1787772;db_xref=ASAP:ABE-0004984;db_xref=UniProtKB/Swiss-Prot:P31826;db_xref=EcoGene:EG11742 EMBL gene 1579633 1580790 . - . ID=.3276;gene=ydeM;locus_tag=b1497;gene_synonym=ECK1491;gene_synonym=JW1492;db_xref=EcoGene:EG13795 EMBL CDS 1579633 1580790 . - 0 ID=.3277;gene=ydeM;locus_tag=b1497;gene_synonym=ECK1491;gene_synonym=JW1492;function=putative enzyme%3B Not classified;note=putative enzyme;codon_start=1;transl_table=11;product=putative YdeN-specific sulfatase-maturating enzyme;protein_id=AAC74570.2;db_xref=GI:87081923;db_xref=ASAP:ABE-0004986;db_xref=UniProtKB/Swiss-Prot:P76134;db_xref=EcoGene:EG13795 EMBL gene 1580842 1582524 . - . ID=.3278;gene=ydeN;locus_tag=b1498;gene_synonym=ECK1492;gene_synonym=JW5243;db_xref=EcoGene:EG13796 EMBL CDS 1580842 1582524 . - 0 ID=.3279;gene=ydeN;locus_tag=b1498;gene_synonym=ECK1492;gene_synonym=JW5243;function=putative enzyme%3B Not classified;note=putative sulfatase%3B GO_process: GO:0006790 - sulfur metabolic process;codon_start=1;transl_table=11;product=putative Ser-type periplasmic non-aryl sulfatase;protein_id=AAC74571.2;db_xref=GI:87081924;db_xref=ASAP:ABE-0004988;db_xref=UniProtKB/Swiss-Prot:P77318;db_xref=EcoGene:EG13796 EMBL gene 1582926 1583687 . - . ID=.3280;gene=ydeO;locus_tag=b1499;gene_synonym=ECK1493;gene_synonym=JW1494;db_xref=EcoGene:EG13797 EMBL CDS 1582926 1583687 . - 0 ID=.3281;gene=ydeO;locus_tag=b1499;gene_synonym=ECK1493;gene_synonym=JW1494;function=regulator%3B Not classified;note=putative ARAC-type regulatory protein%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=UV-inducible global regulator%2C EvgA-%2C GadE-dependent;protein_id=AAC74572.1;db_xref=GI:1787776;db_xref=ASAP:ABE-0004992;db_xref=UniProtKB/Swiss-Prot:P76135;db_xref=EcoGene:EG13797 EMBL gene 1583762 1583959 . - . ID=.3282;gene=safA;locus_tag=b1500;gene_synonym=ECK4475;gene_synonym=yneN;db_xref=EcoGene:EG14466 EMBL CDS 1583762 1583959 . - 0 ID=.3283;gene=safA;locus_tag=b1500;gene_synonym=ECK4475;gene_synonym=yneN;function=regulator%3B Global regulatory functions;codon_start=1;transl_table=11;product=two-component system connector membrane protein%2C EvgSA to PhoQP;protein_id=AAC74573.1;db_xref=GI:1787777;db_xref=UniProtKB/Swiss-Prot:P76136;db_xref=EcoGene:EG14466 EMBL gene 1584207 1586486 . - . ID=.3284;gene=ydeP;locus_tag=b1501;gene_synonym=ECK1494;gene_synonym=JW1495;db_xref=EcoGene:EG13798 EMBL CDS 1584207 1586486 . - 0 ID=.3285;gene=ydeP;locus_tag=b1501;gene_synonym=ECK1494;gene_synonym=JW1495;function=putative enzyme%3B Not classified;note=putative oxidoreductase%2C major subunit;codon_start=1;transl_table=11;product=putative oxidoreductase;protein_id=AAC74574.1;db_xref=GI:1787778;db_xref=ASAP:ABE-0005001;db_xref=UniProtKB/Swiss-Prot:P77561;db_xref=EcoGene:EG13798 EMBL gene 1586820 1587734 . - . ID=.3286;gene=ydeQ;locus_tag=b1502;gene_synonym=ECK1495;gene_synonym=fmlD;gene_synonym=JW1496;db_xref=EcoGene:EG13799 EMBL CDS 1586820 1587734 . - 0 ID=.3287;gene=ydeQ;locus_tag=b1502;gene_synonym=ECK1495;gene_synonym=fmlD;gene_synonym=JW1496;function=putative structural component%3B Surface structures;note=putative adhesin%3B similar to FimH protein;codon_start=1;transl_table=11;product=putative fimbrial-like adhesin protein;protein_id=AAC74575.1;db_xref=GI:1787779;db_xref=ASAP:ABE-0005006;db_xref=UniProtKB/Swiss-Prot:P77588;db_xref=EcoGene:EG13799 EMBL gene 1587793 1588296 . - . ID=.3288;gene=ydeR;locus_tag=b1503;gene_synonym=ECK1496;gene_synonym=JW1497;db_xref=EcoGene:EG13800 EMBL CDS 1587793 1588296 . - 0 ID=.3289;gene=ydeR;locus_tag=b1503;gene_synonym=ECK1496;gene_synonym=JW1497;function=putative structural component%3B Surface structures;note=putative fimbrial-like protein%3B GO_component: GO:0009289 - pilus;codon_start=1;transl_table=11;product=putative fimbrial-like adhesin protein;protein_id=AAC74576.1;db_xref=GI:1787780;db_xref=ASAP:ABE-0005008;db_xref=UniProtKB/Swiss-Prot:P77294;db_xref=EcoGene:EG13800 EMBL gene 1588309 1588839 . - . ID=.3290;gene=ydeS;locus_tag=b1504;gene_synonym=ECK1497;gene_synonym=JW1498;db_xref=EcoGene:EG13801 EMBL CDS 1588309 1588839 . - 0 ID=.3291;gene=ydeS;locus_tag=b1504;gene_synonym=ECK1497;gene_synonym=JW1498;function=putative structural component%3B Surface structures;note=putative fimbrial-like protein%3B GO_component: GO:0009289 - pilus;codon_start=1;transl_table=11;product=putative fimbrial-like adhesin protein;protein_id=AAC74577.1;db_xref=GI:1787781;db_xref=ASAP:ABE-0005013;db_xref=UniProtKB/Swiss-Prot:P77789;db_xref=EcoGene:EG13801 EMBL gene 1588853 1590079 . - . ID=.3292;gene=ydeT;locus_tag=b1505;gene_synonym=ECK1498;gene_synonym=fmlC;gene_synonym=JW1499;pseudo=true;db_xref=EcoGene:EG13802 EMBL CDS 1588853 1590079 . - 0 ID=.3293;gene=ydeT;locus_tag=b1505;gene_synonym=ECK1498;gene_synonym=fmlC;gene_synonym=JW1499;note=pseudogene%3B putative outer membrane protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0005017;db_xref=UniProtKB/Swiss-Prot:P76137;db_xref=EcoGene:EG13802 EMBL gene 1590334 1590536 . - . ID=.3294;gene=yneL;locus_tag=b1506;gene_synonym=ECK1499;gene_synonym=JW5244;pseudo=true;db_xref=EcoGene:EG14360 EMBL biological_region 1590334 1590536 . - 0 ID=.3295;featflags=type:CDS;gene=yneL;locus_tag=b1506;gene_synonym=ECK1499;gene_synonym=JW5244;note=pseudogene%2C AraC family;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0005019;db_xref=UniProtKB/Swiss-Prot:P76138;db_xref=EcoGene:EG14360 EMBL CDS 1590334 1590426 . - 0 Parent=.3295 EMBL CDS 1590426 1590536 . - 0 Parent=.3295 EMBL sequence_feature 1590750 1590777 . - . ID=.3298;note=Dif%3B site of action for XerCD chromosome resolvase%3B required for proper segregation of circular daughter chromosomes%3B Dif%3B recA-independent recombination site in terminus EMBL gene 1590854 1592176 . - . ID=.3299;gene=hipA;locus_tag=b1507;gene_synonym=ECK1500;gene_synonym=JW1500;db_xref=EcoGene:EG10443 EMBL CDS 1590854 1592176 . - 0 ID=.3300;gene=hipA;locus_tag=b1507;gene_synonym=ECK1500;gene_synonym=JW1500;function=enzyme%3B Protein modification;note=persistence to inhibition of murein or DNA biosynthesis%2C DNA-binding regulator%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009252 - peptidoglycan biosynthetic process%3B GO_process: GO:0006259 - DNA metabolic process;codon_start=1;transl_table=11;product=inactivating GltX kinase facilitating persister formation%3B toxin of HipAB TA pair%3B autokinase;protein_id=AAC74580.1;db_xref=GI:1787785;db_xref=ASAP:ABE-0005022;db_xref=UniProtKB/Swiss-Prot:P23874;db_xref=EcoGene:EG10443 EMBL gene 1592176 1592442 . - . ID=.3301;gene=hipB;locus_tag=b1508;gene_synonym=ECK1501;gene_synonym=JW1501;db_xref=EcoGene:EG10442 EMBL CDS 1592176 1592442 . - 0 ID=.3302;gene=hipB;locus_tag=b1508;gene_synonym=ECK1501;gene_synonym=JW1501;function=regulator%3B Murein sacculus%2C peptidoglycan;experiment=N-terminus verified by Edman degradation: PMID 8021189;note=persistence to inhibition of murein or DNA biosynthesis%3B regulatory protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009252 - peptidoglycan biosynthetic process%3B GO_process: GO:0006259 - DNA metabolic process;codon_start=1;transl_table=11;product=antitoxin of HipAB toxin-antitoxin system;protein_id=AAC74581.1;db_xref=GI:1787786;db_xref=ASAP:ABE-0005024;db_xref=UniProtKB/Swiss-Prot:P23873;db_xref=EcoGene:EG10442 EMBL repeat_region 1592631 1592655 . + . ID=.3303;note=REP123 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 1592665 1597987 . - . ID=.3304;gene=yneO;locus_tag=b4696;gene_synonym=ECK1503;gene_synonym=JW1503;gene_synonym=orfT;gene_synonym=ydeK;gene_synonym=ydeU;pseudo=true;db_xref=EcoGene:EG11780 EMBL biological_region 1592665 1597987 . - 0 ID=.3305;featflags=type:CDS;gene=yneO;locus_tag=b4696;gene_synonym=ECK1503;gene_synonym=JW1503;gene_synonym=orfT;gene_synonym=ydeK;gene_synonym=ydeU;note=pseudogene%2C AidA homolog;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0005037;db_xref=UniProtKB/Swiss-Prot:P32051;db_xref=EcoGene:EG11780 EMBL CDS 1592665 1594125 . - 0 Parent=.3305 EMBL CDS 1594127 1597987 . - 0 Parent=.3305 EMBL gene 1598617 1600209 . - . ID=.3308;gene=lsrK;locus_tag=b1511;gene_synonym=ECK1504;gene_synonym=JW1504;gene_synonym=ydeV;db_xref=EcoGene:EG13804 EMBL CDS 1598617 1600209 . - 0 ID=.3309;gene=lsrK;locus_tag=b1511;gene_synonym=ECK1504;gene_synonym=JW1504;gene_synonym=ydeV;function=enzyme%3B Not classified;codon_start=1;transl_table=11;product=autoinducer-2 (AI-2) kinase;protein_id=AAC74584.1;db_xref=GI:1787789;db_xref=ASAP:ABE-0005041;db_xref=UniProtKB/Swiss-Prot:P77432;db_xref=EcoGene:EG13804 EMBL gene 1600288 1601241 . - . ID=.3310;gene=lsrR;locus_tag=b1512;gene_synonym=ECK1505;gene_synonym=JW1505;gene_synonym=ydeW;db_xref=EcoGene:EG13805 EMBL CDS 1600288 1601241 . - 0 ID=.3311;gene=lsrR;locus_tag=b1512;gene_synonym=ECK1505;gene_synonym=JW1505;gene_synonym=ydeW;function=regulator%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=GO_function: GO:0016564 - transcription repressor activity;codon_start=1;transl_table=11;product=lsr operon transcriptional repressor;protein_id=AAC74585.1;db_xref=GI:1787791;db_xref=ASAP:ABE-0005045;db_xref=UniProtKB/Swiss-Prot:P76141;db_xref=EcoGene:EG13805 EMBL gene 1601490 1603025 . + . ID=.3312;gene=lsrA;locus_tag=b1513;gene_synonym=ECK1506;gene_synonym=ego;gene_synonym=JW1506;gene_synonym=ydeX;db_xref=EcoGene:EG13806 EMBL CDS 1601490 1603025 . + 0 ID=.3313;gene=lsrA;locus_tag=b1513;gene_synonym=ECK1506;gene_synonym=ego;gene_synonym=JW1506;gene_synonym=ydeX;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=autoinducer-2 (AI-2)-transporting ATPase%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=autoinducer 2 import ATP-binding protein;protein_id=AAC74586.1;db_xref=GI:1787792;db_xref=ASAP:ABE-0005056;db_xref=UniProtKB/Swiss-Prot:P77257;db_xref=EcoGene:EG13806 EMBL gene 1603019 1604047 . + . ID=.3314;gene=lsrC;locus_tag=b1514;gene_synonym=ECK1507;gene_synonym=JW1507;gene_synonym=ydeY;db_xref=EcoGene:EG13807 EMBL CDS 1603019 1604047 . + 0 ID=.3315;gene=lsrC;locus_tag=b1514;gene_synonym=ECK1507;gene_synonym=JW1507;gene_synonym=ydeY;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=autoinducer-2 (AI-2)-transporting membrane channel protein%3B membrane component of ABC superfamily%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=autoinducer 2 import system permease protein;protein_id=AAC74587.1;db_xref=GI:1787793;db_xref=ASAP:ABE-0005059;db_xref=UniProtKB/Swiss-Prot:P77672;db_xref=EcoGene:EG13807 EMBL gene 1604047 1605039 . + . ID=.3316;gene=lsrD;locus_tag=b1515;gene_synonym=ECK1508;gene_synonym=JW1508;gene_synonym=ydeZ;db_xref=EcoGene:EG13808 EMBL CDS 1604047 1605039 . + 0 ID=.3317;gene=lsrD;locus_tag=b1515;gene_synonym=ECK1508;gene_synonym=JW1508;gene_synonym=ydeZ;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=autoinducer-2 (AI-2)-transporting membrane channel protein%3B membrane component of ABC superfamily%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=autoinducer 2 import system permease protein;protein_id=AAC74588.1;db_xref=GI:1787794;db_xref=ASAP:ABE-0005061;db_xref=UniProtKB/Swiss-Prot:P0AFS1;db_xref=EcoGene:EG13808 EMBL gene 1605051 1606073 . + . ID=.3318;gene=lsrB;locus_tag=b1516;gene_synonym=ECK1509;gene_synonym=JW1509;gene_synonym=yneA;db_xref=EcoGene:EG13809 EMBL CDS 1605051 1606073 . + 0 ID=.3319;gene=lsrB;locus_tag=b1516;gene_synonym=ECK1509;gene_synonym=JW1509;gene_synonym=yneA;function=putative regulator%3B Not classified;note=periplasmic autoinducer-2 (AI-2) binding protein%3B periplasmic-binding component of ABC superfamily%3B GO_component: GO:0042597 - periplasmic space;codon_start=1;transl_table=11;product=autoinducer 2-binding protein;protein_id=AAC74589.1;db_xref=GI:1787795;db_xref=ASAP:ABE-0005063;db_xref=UniProtKB/Swiss-Prot:P76142;db_xref=EcoGene:EG13809 EMBL gene 1606100 1606975 . + . ID=.3320;gene=lsrF;locus_tag=b1517;gene_synonym=ECK1510;gene_synonym=JW1510;gene_synonym=yneB;db_xref=EcoGene:EG13810 EMBL CDS 1606100 1606975 . + 0 ID=.3321;gene=lsrF;locus_tag=b1517;gene_synonym=ECK1510;gene_synonym=JW1510;gene_synonym=yneB;function=enzyme%3B Degradation of small molecules: Carbon compounds;codon_start=1;transl_table=11;product=putative autoinducer-2 (AI-2) aldolase;protein_id=AAC74590.1;db_xref=GI:1787796;db_xref=ASAP:ABE-0005065;db_xref=UniProtKB/Swiss-Prot:P76143;db_xref=EcoGene:EG13810 EMBL gene 1606999 1607289 . + . ID=.3322;gene=lsrG;locus_tag=b1518;gene_synonym=ECK1511;gene_synonym=JW1511;gene_synonym=yneC;db_xref=EcoGene:EG13811 EMBL CDS 1606999 1607289 . + 0 ID=.3323;gene=lsrG;locus_tag=b1518;gene_synonym=ECK1511;gene_synonym=JW1511;gene_synonym=yneC;function=enzyme%3B Degradation of small molecules: Carbon compounds;codon_start=1;transl_table=11;product=autoinducer-2 (AI-2) degrading protein LsrG;protein_id=AAC74591.1;db_xref=GI:1787797;db_xref=ASAP:ABE-0005067;db_xref=UniProtKB/Swiss-Prot:P64461;db_xref=EcoGene:EG13811 EMBL gene 1607346 1608104 . + . ID=.3324;gene=tam;locus_tag=b1519;gene_synonym=ECK1512;gene_synonym=JW1512;gene_synonym=lsrE;gene_synonym=yneD;db_xref=EcoGene:EG13812 EMBL CDS 1607346 1608104 . + 0 ID=.3325;gene=tam;locus_tag=b1519;gene_synonym=ECK1512;gene_synonym=JW1512;gene_synonym=lsrE;gene_synonym=yneD;ec_number=2.1.1.144;function=enzyme%3B Detoxification;note=trans-aconitate 2-methyltransferase%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=trans-aconitate methyltransferase;protein_id=AAC74592.1;db_xref=GI:1787798;db_xref=ASAP:ABE-0005070;db_xref=UniProtKB/Swiss-Prot:P76145;db_xref=EcoGene:EG13812 EMBL gene 1608108 1609022 . - . ID=.3326;gene=yneE;locus_tag=b1520;gene_synonym=ECK1513;gene_synonym=JW5245;db_xref=EcoGene:EG13813 EMBL CDS 1608108 1609022 . - 0 ID=.3327;gene=yneE;locus_tag=b1520;gene_synonym=ECK1513;gene_synonym=JW5245;note=GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=bestrophin family putative inner membrane protein;protein_id=AAC74593.2;db_xref=GI:87081925;db_xref=ASAP:ABE-0005072;db_xref=UniProtKB/Swiss-Prot:P76146;db_xref=EcoGene:EG13813 EMBL gene 1609229 1610680 . - . ID=.3328;gene=uxaB;locus_tag=b1521;gene_synonym=ECK1514;gene_synonym=JW1514;db_xref=EcoGene:EG11065 EMBL CDS 1609229 1610680 . - 0 ID=.3329;gene=uxaB;locus_tag=b1521;gene_synonym=ECK1514;gene_synonym=JW1514;ec_number=1.1.1.58;function=enzyme%3B Degradation of small molecules: Carbon compounds;experiment=N-terminus verified by Edman degradation: PMID 3525742;note=altronate oxidoreductase%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=altronate oxidoreductase%2C NAD-dependent;protein_id=AAT48131.1;db_xref=GI:48994885;db_xref=ASAP:ABE-0005076;db_xref=UniProtKB/Swiss-Prot:P0A6L7;db_xref=EcoGene:EG11065 EMBL gene 1610907 1611854 . - . ID=.3330;gene=yneF;locus_tag=b1522;gene_synonym=ECK1515;gene_synonym=JW5825;db_xref=EcoGene:EG13814 EMBL CDS 1610907 1611854 . - 0 ID=.3331;gene=yneF;locus_tag=b1522;gene_synonym=ECK1515;gene_synonym=JW5825;codon_start=1;transl_table=11;product=putative membrane-bound diguanylate cyclase;protein_id=AAC74595.1;db_xref=GI:1787802;db_xref=ASAP:ABE-0005081;db_xref=UniProtKB/Swiss-Prot:P76147;db_xref=EcoGene:EG13814 EMBL gene 1611966 1612325 . - . ID=.3332;gene=yneG;locus_tag=b1523;gene_synonym=ECK1516;gene_synonym=JW1516;db_xref=EcoGene:EG13815 EMBL CDS 1611966 1612325 . - 0 ID=.3333;gene=yneG;locus_tag=b1523;gene_synonym=ECK1516;gene_synonym=JW1516;codon_start=1;transl_table=11;product=DUF4186 family protein;protein_id=AAC74596.1;db_xref=GI:1787803;db_xref=ASAP:ABE-0005084;db_xref=UniProtKB/Swiss-Prot:P76148;db_xref=EcoGene:EG13815 EMBL gene 1612325 1613251 . - . ID=.3334;gene=glsB;locus_tag=b1524;gene_synonym=ECK1517;gene_synonym=glsA2;gene_synonym=JW1517;gene_synonym=yneH;db_xref=EcoGene:EG13816 EMBL CDS 1612325 1613251 . - 0 ID=.3335;gene=glsB;locus_tag=b1524;gene_synonym=ECK1517;gene_synonym=glsA2;gene_synonym=JW1517;gene_synonym=yneH;function=enzyme%3B l-glutamine catabolism;note=putative glutaminase%3B GO_process: GO:0009063 - cellular amino acid catabolic process;codon_start=1;transl_table=11;product=glutaminase 2;protein_id=AAC74597.1;db_xref=GI:1787804;db_xref=ASAP:ABE-0005086;db_xref=UniProtKB/Swiss-Prot:P0A6W0;db_xref=EcoGene:EG13816 EMBL gene 1613315 1614703 . - . ID=.3336;gene=sad;locus_tag=b1525;gene_synonym=ECK1518;gene_synonym=JW5247;gene_synonym=yneI;db_xref=EcoGene:EG13817 EMBL CDS 1613315 1614703 . - 0 ID=.3337;gene=sad;locus_tag=b1525;gene_synonym=ECK1518;gene_synonym=JW5247;gene_synonym=yneI;ec_number=1.2.1.24;function=putative enzyme%3B Not classified;note=putative aldehyde dehydrogenase;codon_start=1;transl_table=11;product=succinate semialdehyde dehydrogenase%2C NAD(P)+-dependent;protein_id=AAC74598.2;db_xref=GI:87081926;db_xref=ASAP:ABE-0005092;db_xref=UniProtKB/Swiss-Prot:P76149;db_xref=EcoGene:EG13817 EMBL gene 1614804 1615685 . + . ID=.3338;gene=yneJ;locus_tag=b1526;gene_synonym=ECK1519;gene_synonym=JW1519;db_xref=EcoGene:EG13818 EMBL CDS 1614804 1615685 . + 0 ID=.3339;gene=yneJ;locus_tag=b1526;gene_synonym=ECK1519;gene_synonym=JW1519;function=putative regulator%3B Not classified;note=putative transcriptional regulator LYSR-type%3B GO_function: GO:0016563 - transcription activator activity%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=putative DNA-binding transcriptional regulator;protein_id=AAC74599.1;db_xref=GI:1787806;db_xref=ASAP:ABE-0005096;db_xref=UniProtKB/Swiss-Prot:P77309;db_xref=EcoGene:EG13818 EMBL gene 1615763 1616878 . + . ID=.3340;gene=yneK;locus_tag=b1527;gene_synonym=ECK1520;gene_synonym=JW1520;db_xref=EcoGene:EG13819 EMBL CDS 1615763 1616878 . + 0 ID=.3341;gene=yneK;locus_tag=b1527;gene_synonym=ECK1520;gene_synonym=JW1520;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC74600.1;db_xref=GI:1787807;db_xref=ASAP:ABE-0005100;db_xref=UniProtKB/Swiss-Prot:P76150;db_xref=EcoGene:EG13819 EMBL gene 1617028 1618218 . + . ID=.3342;gene=ydeA;locus_tag=b1528;gene_synonym=ECK1521;gene_synonym=JW1521;gene_synonym=sotB;db_xref=EcoGene:EG11636 EMBL CDS 1617028 1618218 . + 0 ID=.3343;gene=ydeA;locus_tag=b1528;gene_synonym=ECK1521;gene_synonym=JW1521;gene_synonym=sotB;function=transport%3B Transport of small molecules: sugars;note=L-arabinose/isopropyl-beta-D-thiogalactopyranoside export protein (MFS family)%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_function: GO:0015524 - L-arabinose/beta-D-thiogalactopyranoside:hydrogen antiporter activity%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=arabinose efflux transporter%2C arabinose-inducible;protein_id=AAC74601.1;db_xref=GI:1787808;db_xref=ASAP:ABE-0005103;db_xref=UniProtKB/Swiss-Prot:P31122;db_xref=EcoGene:EG11636 EMBL gene 1618243 1618908 . - . ID=.3344;gene=marC;locus_tag=b1529;gene_synonym=ECK1522;gene_synonym=JW1522;gene_synonym=ydeB;gene_synonym=ydeC;db_xref=EcoGene:EG11637 EMBL CDS 1618243 1618908 . - 0 ID=.3345;gene=marC;locus_tag=b1529;gene_synonym=ECK1522;gene_synonym=JW1522;gene_synonym=ydeB;gene_synonym=ydeC;note=GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=UPF0056 family inner membrane protein;protein_id=AAC74602.1;db_xref=GI:1787809;db_xref=ASAP:ABE-0005106;db_xref=UniProtKB/Swiss-Prot:P0AEY1;db_xref=EcoGene:EG11637 EMBL gene 1619120 1619554 . + . ID=.3346;gene=marR;locus_tag=b1530;gene_synonym=cfxB;gene_synonym=ECK1523;gene_synonym=inaR;gene_synonym=JW5248;gene_synonym=soxQ;db_xref=EcoGene:EG11435 EMBL CDS 1619120 1619554 . + 0 ID=.3347;gene=marR;locus_tag=b1530;gene_synonym=cfxB;gene_synonym=ECK1523;gene_synonym=inaR;gene_synonym=JW5248;gene_synonym=soxQ;function=regulator%3B Drug/analog sensitivity;note=multiple antibiotic resistance protein%3B repressor of mar operon%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription%3B GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=transcriptional repressor of multiple antibiotic resistance;protein_id=AAC74603.2;db_xref=GI:87081927;db_xref=ASAP:ABE-0005110;db_xref=UniProtKB/Swiss-Prot:P27245;db_xref=EcoGene:EG11435 EMBL gene 1619574 1619957 . + . ID=.3348;gene=marA;locus_tag=b1531;gene_synonym=cfxB;gene_synonym=ECK1524;gene_synonym=inaR;gene_synonym=JW5249;gene_synonym=nfxC;gene_synonym=norB;gene_synonym=soxQ;db_xref=EcoGene:EG11434 EMBL CDS 1619574 1619957 . + 0 ID=.3349;gene=marA;locus_tag=b1531;gene_synonym=cfxB;gene_synonym=ECK1524;gene_synonym=inaR;gene_synonym=JW5249;gene_synonym=nfxC;gene_synonym=norB;gene_synonym=soxQ;function=regulator%3B Drug/analog sensitivity;note=multiple antibiotic resistance%3B transcriptional activator of defense systems%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0006350 - transcription%3B GO_process: GO:0042493 - response to drug%3B GO_process: GO:0006805 - xenobiotic metabolic process;codon_start=1;transl_table=11;product=multiple antibiotic resistance transcriptional regulator;protein_id=AAC74604.2;db_xref=GI:87081928;db_xref=ASAP:ABE-0005112;db_xref=UniProtKB/Swiss-Prot:P0ACH5;db_xref=EcoGene:EG11434 EMBL gene 1619989 1620207 . + . ID=.3350;gene=marB;locus_tag=b1532;gene_synonym=ECK1525;gene_synonym=JW1525;db_xref=EcoGene:EG11599 EMBL CDS 1619989 1620207 . + 0 ID=.3351;gene=marB;locus_tag=b1532;gene_synonym=ECK1525;gene_synonym=JW1525;function=putative transport%3B Drug/analog sensitivity;note=multiple antibiotic resistance protein%3B GO_process: GO:0042493 - response to drug%3B GO_process: GO:0006805 - xenobiotic metabolic process;codon_start=1;transl_table=11;product=periplasmic mar operon regulator;protein_id=AAC74605.1;db_xref=GI:1787812;db_xref=ASAP:ABE-0005114;db_xref=UniProtKB/Swiss-Prot:P31121;db_xref=EcoGene:EG11599 EMBL gene 1620238 1621137 . - . ID=.3352;gene=eamA;locus_tag=b1533;gene_synonym=ECK1526;gene_synonym=JW5250;gene_synonym=ydeD;db_xref=EcoGene:EG11639 EMBL CDS 1620238 1621137 . - 0 ID=.3353;gene=eamA;locus_tag=b1533;gene_synonym=ECK1526;gene_synonym=JW5250;gene_synonym=ydeD;note=amino acid metabolite efflux pump;codon_start=1;transl_table=11;product=cysteine and O-acetyl-L-serine efflux system;protein_id=AAC74606.2;db_xref=GI:87081929;db_xref=ASAP:ABE-0005116;db_xref=UniProtKB/Swiss-Prot:P31125;db_xref=EcoGene:EG11639 EMBL gene 1621332 1622519 . + . ID=.3354;gene=ydeE;locus_tag=b1534;gene_synonym=ECK1527;gene_synonym=JW1527;gene_synonym=ydeF;db_xref=EcoGene:EG11640 EMBL CDS 1621332 1622519 . + 0 ID=.3355;gene=ydeE;locus_tag=b1534;gene_synonym=ECK1527;gene_synonym=JW1527;gene_synonym=ydeF;function=putative transport%3B Not classified;note=putative transport protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative transporter;protein_id=AAC74607.1;db_xref=GI:1787815;db_xref=ASAP:ABE-0005121;db_xref=UniProtKB/Swiss-Prot:P31126;db_xref=EcoGene:EG11640 EMBL gene 1622646 1622741 . + . ID=.3356;gene=yneM;locus_tag=b4599;gene_synonym=ECK4409;db_xref=EcoGene:EG14395 EMBL CDS 1622646 1622741 . + 0 ID=.3357;gene=yneM;locus_tag=b4599;gene_synonym=ECK4409;codon_start=1;transl_table=11;product=inner membrane-associated protein;protein_id=ABP93445.1;db_xref=GI:145693135;db_xref=UniProtKB/Swiss-Prot:A5A616;db_xref=EcoGene:EG14395 EMBL gene 1622817 1622914 . - . ID=.3358;gene=mgrR;locus_tag=b4698;gene_synonym=ECK4510;db_xref=EcoGene:EG31184 EMBL ncRNA 1622817 1622914 . - . ID=.3359;ncrna_class=antisense_RNA;gene=mgrR;locus_tag=b4698;gene_synonym=ECK4510;product=sRNA antisense regulator down regulates YgdQ and EptB%2C PhoPQ-regulated%2C Hfq-dependent%3B affects sensitivity to antimicrobial peptides;db_xref=ASAP:ABE-0285266;db_xref=EcoGene:EG31184 EMBL gene 1622960 1623850 . - . ID=.3360;gene=dgcZ;locus_tag=b1535;gene_synonym=ECK1528;gene_synonym=JW1528;gene_synonym=ydeG;gene_synonym=ydeH;db_xref=EcoGene:EG11643 EMBL CDS 1622960 1623850 . - 0 ID=.3361;gene=dgcZ;locus_tag=b1535;gene_synonym=ECK1528;gene_synonym=JW1528;gene_synonym=ydeG;gene_synonym=ydeH;codon_start=1;transl_table=11;product=diguanylate cyclase%2C zinc-sensing;protein_id=AAC74608.1;db_xref=GI:1787816;db_xref=ASAP:ABE-0005123;db_xref=UniProtKB/Swiss-Prot:P31129;db_xref=EcoGene:EG11643 EMBL gene 1624105 1624497 . - . ID=.3362;gene=ydeI;locus_tag=b1536;gene_synonym=ECK1529;gene_synonym=JW1529;db_xref=EcoGene:EG11644 EMBL CDS 1624105 1624497 . - 0 ID=.3363;gene=ydeI;locus_tag=b1536;gene_synonym=ECK1529;gene_synonym=JW1529;codon_start=1;transl_table=11;product=hydrogen peroxide resistance OB fold protein%3B putative periplasmic protein;protein_id=AAC74609.1;db_xref=GI:1787817;db_xref=ASAP:ABE-0005127;db_xref=UniProtKB/Swiss-Prot:P31130;db_xref=EcoGene:EG11644 EMBL gene 1624773 1625291 . + . ID=.3364;gene=ydeJ;locus_tag=b1537;gene_synonym=ECK1530;gene_synonym=JW1530;db_xref=EcoGene:EG11645 EMBL CDS 1624773 1625291 . + 0 ID=.3365;gene=ydeJ;locus_tag=b1537;gene_synonym=ECK1530;gene_synonym=JW1530;codon_start=1;transl_table=11;product=inactive PncC family protein;protein_id=AAC74610.1;db_xref=GI:1787818;db_xref=ASAP:ABE-0005131;db_xref=UniProtKB/Swiss-Prot:P31131;db_xref=EcoGene:EG11645 EMBL gene 1625335 1627380 . - . ID=.3366;gene=dcp;locus_tag=b1538;gene_synonym=ECK1531;gene_synonym=JW1531;db_xref=EcoGene:EG10212 EMBL CDS 1625335 1627380 . - 0 ID=.3367;gene=dcp;locus_tag=b1538;gene_synonym=ECK1531;gene_synonym=JW1531;ec_number=3.4.15.5;function=enzyme%3B Degradation of proteins%2C peptides%2C glyco;codon_start=1;transl_table=11;product=dipeptidyl carboxypeptidase II;protein_id=AAC74611.1;db_xref=GI:1787819;db_xref=ASAP:ABE-0005133;db_xref=UniProtKB/Swiss-Prot:P24171;db_xref=EcoGene:EG10212 EMBL gene 1627517 1628263 . + . ID=.3368;gene=ydfG;locus_tag=b1539;gene_synonym=ECK1532;gene_synonym=JW1532;db_xref=EcoGene:EG12345 EMBL CDS 1627517 1628263 . + 0 ID=.3369;gene=ydfG;locus_tag=b1539;gene_synonym=ECK1532;gene_synonym=JW1532;function=putative enzyme%3B Not classified;experiment=N-terminus verified by Edman degradation: PMID 9298646;note=putative oxidoreductase;codon_start=1;transl_table=11;product=NADP-dependent 3-hydroxy acid dehydrogenase%3B malonic semialdehyde reductase;protein_id=AAC74612.1;db_xref=GI:1787820;db_xref=ASAP:ABE-0005137;db_xref=UniProtKB/Swiss-Prot:P39831;db_xref=EcoGene:EG12345 EMBL gene 1628352 1629038 . + . ID=.3370;gene=rspR;locus_tag=b1540;gene_synonym=ECK1533;gene_synonym=JW1533;gene_synonym=ydfH;db_xref=EcoGene:EG13820 EMBL CDS 1628352 1629038 . + 0 ID=.3371;gene=rspR;locus_tag=b1540;gene_synonym=ECK1533;gene_synonym=JW1533;gene_synonym=ydfH;function=regulator%3B Degradation of small molecules;note=GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=transcriptional repressor for rspAB;protein_id=AAC74613.1;db_xref=GI:1787821;db_xref=ASAP:ABE-0005144;db_xref=UniProtKB/Swiss-Prot:P0ACM2;db_xref=EcoGene:EG13820 EMBL gene 1629215 1629418 . + . ID=.3372;gene=ydfZ;locus_tag=b1541;gene_synonym=ECK1534;gene_synonym=JW1534;db_xref=EcoGene:EG13838 EMBL CDS 1629215 1629418 . + 0 ID=.3373;gene=ydfZ;locus_tag=b1541;gene_synonym=ECK1534;gene_synonym=JW1534;codon_start=1;transl_table=11;product=selenoprotein%2C function unknown;protein_id=AAC74614.1;db_xref=GI:1787822;db_xref=ASAP:ABE-0005147;db_xref=UniProtKB/Swiss-Prot:P64463;db_xref=EcoGene:EG13838 EMBL gene 1629453 1630913 . - . ID=.3374;gene=ydfI;locus_tag=b1542;gene_synonym=ECK1535;gene_synonym=JW1535;db_xref=EcoGene:EG13821 EMBL CDS 1629453 1630913 . - 0 ID=.3375;gene=ydfI;locus_tag=b1542;gene_synonym=ECK1535;gene_synonym=JW1535;function=putative enzyme%3B Not classified;note=putative oxidoreductase;codon_start=1;transl_table=11;product=putative NAD-dependent D-mannonate oxidoreductase;protein_id=AAC74615.1;db_xref=GI:1787823;db_xref=ASAP:ABE-0005149;db_xref=UniProtKB/Swiss-Prot:P77260;db_xref=EcoGene:EG13821 EMBL biological_region 1631002 1652838 . - . ID=.3376;featflags=type:gene;gene=ydfJ;locus_tag=b4600;gene_synonym=ECK1536;gene_synonym=JW1536;gene_synonym=ynfP;pseudo=true;db_xref=EcoGene:EG13822 EMBL gene 1631002 1632285 . - . Parent=.3376 EMBL gene 1652755 1652838 . - . Parent=.3376 EMBL biological_region 1631002 1652838 . - 0 ID=.3379;featflags=type:CDS;gene=ydfJ;locus_tag=b4600;gene_synonym=ECK1536;gene_synonym=JW1536;gene_synonym=ynfP;note=pseudogene%2C MFS transporter family%3B interrupted by Qin prophage%3BPhage or Prophage Related%3B putative transport protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0005152;db_xref=ASAP:ABE-0285055;db_xref=UniProtKB/Swiss-Prot:P77228;db_xref=EcoGene:EG13822 EMBL CDS 1631002 1632285 . - 0 Parent=.3379 EMBL CDS 1652755 1652838 . - 0 Parent=.3379 EMBL sequence_feature 1632286 1652743 . - . ID=.3382;gene=ydfJ;locus_tag=b4600;gene_synonym=ECK1536;gene_synonym=JW1536;gene_synonym=ynfP;note=cryptic prophage Qin/Kim;pseudo=true EMBL gene 1633072 1633305 . + . ID=.3383;gene=ydfK;locus_tag=b1544;gene_synonym=ECK1537;gene_synonym=JW1537;db_xref=EcoGene:EG13823 EMBL CDS 1633072 1633305 . + 0 ID=.3384;gene=ydfK;locus_tag=b1544;gene_synonym=ECK1537;gene_synonym=JW1537;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=cold shock protein%2C function unknown%2C Qin prophage;protein_id=AAC74617.2;db_xref=GI:345297174;db_xref=ASAP:ABE-0005161;db_xref=UniProtKB/Swiss-Prot:P76154;db_xref=EcoGene:EG13823 EMBL gene 1633622 1634212 . + . ID=.3385;gene=pinQ;locus_tag=b1545;gene_synonym=ECK1538;gene_synonym=JW1538;gene_synonym=ydfL;db_xref=EcoGene:EG13824 EMBL CDS 1633622 1634212 . + 0 ID=.3386;gene=pinQ;locus_tag=b1545;gene_synonym=ECK1538;gene_synonym=JW1538;gene_synonym=ydfL;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=Qin prophage%3B putative site-specific recombinase;protein_id=AAC74618.1;db_xref=GI:1787827;db_xref=ASAP:ABE-0005164;db_xref=UniProtKB/Swiss-Prot:P77170;db_xref=EcoGene:EG13824 EMBL gene 1634310 1634885 . - . ID=.3387;gene=tfaQ;locus_tag=b1546;gene_synonym=ECK1539;gene_synonym=JW1539;gene_synonym=ydfM;db_xref=EcoGene:EG13825 EMBL CDS 1634310 1634885 . - 0 ID=.3388;gene=tfaQ;locus_tag=b1546;gene_synonym=ECK1539;gene_synonym=JW1539;gene_synonym=ydfM;function=Phage or Prophage Related;note=tail fiber assembly protein homolog from lambdoid prophage Qin;codon_start=1;transl_table=11;product=Qin prophage%3B putative tail fibre assembly protein;protein_id=AAC74619.1;db_xref=GI:2367120;db_xref=ASAP:ABE-0005166;db_xref=UniProtKB/Swiss-Prot:P76155;db_xref=EcoGene:EG13825 EMBL gene 1634885 1635847 . - . ID=.3389;gene=stfQ;locus_tag=b1547;gene_synonym=ECK1540;gene_synonym=JW1540;gene_synonym=ydfN;db_xref=EcoGene:EG13826 EMBL CDS 1634885 1635847 . - 0 ID=.3390;gene=stfQ;locus_tag=b1547;gene_synonym=ECK1540;gene_synonym=JW1540;gene_synonym=ydfN;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=Qin prophage%3B putative side tail fibre assembly protein;protein_id=AAC74620.1;db_xref=GI:1787829;db_xref=ASAP:ABE-0005168;db_xref=UniProtKB/Swiss-Prot:P77515;db_xref=EcoGene:EG13826 EMBL gene 1635840 1636367 . - . ID=.3391;gene=nohQ;locus_tag=b1548;gene_synonym=ECK1541;gene_synonym=JW1541;gene_synonym=nohA;pseudo=true;db_xref=EcoGene:EG11634 EMBL CDS 1635840 1636367 . - 0 ID=.3392;gene=nohQ;locus_tag=b1548;gene_synonym=ECK1541;gene_synonym=JW1541;gene_synonym=nohA;note=pseudogene%2C Qin prophage%3B Phage DNA packaging protein Nu1 family%3BPhage or Prophage Related%3B DNA packaging protein NU1 homolog from lambdoid prophage Qin;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0005172;db_xref=UniProtKB/Swiss-Prot:P31061;db_xref=EcoGene:EG11634 EMBL gene 1636756 1636989 . + . ID=.3393;gene=ynfO;locus_tag=b4533;gene_synonym=ECK1542;gene_synonym=JW5251;db_xref=EcoGene:EG14422 EMBL CDS 1636756 1636989 . + 0 ID=.3394;gene=ynfO;locus_tag=b4533;gene_synonym=ECK1542;gene_synonym=JW5251;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=uncharacterized protein%2C Qin prophage;protein_id=ABD18667.1;db_xref=GI:87081930;db_xref=ASAP:ABE-0285054;db_xref=UniProtKB/Swiss-Prot:Q2EES0;db_xref=EcoGene:EG14422 EMBL gene 1637047 1637457 . + . ID=.3395;gene=ydfO;locus_tag=b1549;gene_synonym=ECK1543;gene_synonym=JW5252;db_xref=EcoGene:EG13827 EMBL CDS 1637047 1637457 . + 0 ID=.3396;gene=ydfO;locus_tag=b1549;gene_synonym=ECK1543;gene_synonym=JW5252;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=Qin prophage%3B uncharacterized protein;protein_id=AAC74622.2;db_xref=GI:87081931;db_xref=ASAP:ABE-0005175;db_xref=UniProtKB/Swiss-Prot:P76156;db_xref=EcoGene:EG13827 EMBL gene 1637609 1637782 . - . ID=.3397;gene=gnsB;locus_tag=b1550;gene_synonym=ECK1544;gene_synonym=JW5253;gene_synonym=ydfY;db_xref=EcoGene:EG13837 EMBL CDS 1637609 1637782 . - 0 ID=.3398;gene=gnsB;locus_tag=b1550;gene_synonym=ECK1544;gene_synonym=JW5253;gene_synonym=ydfY;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=Qin prophage%3B multicopy suppressor of secG(Cs) and fabA6(Ts);protein_id=AAC74623.2;db_xref=GI:87081932;db_xref=ASAP:ABE-0005177;db_xref=UniProtKB/Swiss-Prot:P77695;db_xref=EcoGene:EG13837 EMBL gene 1637954 1638109 . - . ID=.3399;gene=ynfN;locus_tag=b1551;gene_synonym=ECK1545;gene_synonym=JW5254;db_xref=EcoGene:EG14388 EMBL CDS 1637954 1638109 . - 0 ID=.3400;gene=ynfN;locus_tag=b1551;gene_synonym=ECK1545;gene_synonym=JW5254;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=Qin prophage%3B cold shock-induced protein;protein_id=AAC74624.2;db_xref=GI:87081933;db_xref=ASAP:ABE-0005180;db_xref=UniProtKB/Swiss-Prot:P76157;db_xref=EcoGene:EG14388 EMBL gene 1638455 1638667 . - . ID=.3401;gene=cspI;locus_tag=b1552;gene_synonym=cspJ;gene_synonym=ECK1546;gene_synonym=JW1544;db_xref=EcoGene:EG13877 EMBL CDS 1638455 1638667 . - 0 ID=.3402;gene=cspI;locus_tag=b1552;gene_synonym=cspJ;gene_synonym=ECK1546;gene_synonym=JW1544;function=Phage or Prophage Related;note=cold shock-like protein;codon_start=1;transl_table=11;product=Qin prophage%3B cold shock protein;protein_id=AAC74625.1;db_xref=GI:1787834;db_xref=ASAP:ABE-0005183;db_xref=UniProtKB/Swiss-Prot:P0A986;db_xref=EcoGene:EG13877 EMBL gene 1639030 1639527 . - . ID=.3403;gene=rzpQ;locus_tag=b1553;gene_synonym=ECK1547;gene_synonym=JW1545;gene_synonym=Rz;gene_synonym=ydfP;db_xref=EcoGene:EG13828 EMBL CDS 1639030 1639527 . - 0 ID=.3404;gene=rzpQ;locus_tag=b1553;gene_synonym=ECK1547;gene_synonym=JW1545;gene_synonym=Rz;gene_synonym=ydfP;function=Phage or Prophage Related;note=completely contained in another CDS;codon_start=1;transl_table=11;product=Rz-like protein%2C Qin prophage;protein_id=AAC74626.1;db_xref=GI:1787835;db_xref=ASAP:ABE-0005187;db_xref=UniProtKB/Swiss-Prot:P76158;db_xref=EcoGene:EG13828 EMBL gene 1639080 1639334 . - . ID=.3405;gene=rzoQ;locus_tag=b4689;gene_synonym=ECK4503;gene_synonym=Rz1;db_xref=EcoGene:EG14493 EMBL CDS 1639080 1639334 . - 0 ID=.3406;gene=rzoQ;locus_tag=b4689;gene_synonym=ECK4503;gene_synonym=Rz1;note=completely contained in another CDS;codon_start=1;transl_table=11;product=putative Rz1-like lipoprotein%2C Qin prophage;protein_id=ACO59993.1;db_xref=GI:226510942;db_xref=UniProtKB/Swiss-Prot:C1P601;db_xref=EcoGene:EG14493 EMBL gene 1639524 1640057 . - . ID=.3407;gene=rrrQ;locus_tag=b1554;gene_synonym=arrQ;gene_synonym=ECK1548;gene_synonym=JW1546;gene_synonym=ydfQ;db_xref=EcoGene:EG13829 EMBL CDS 1639524 1640057 . - 0 ID=.3408;gene=rrrQ;locus_tag=b1554;gene_synonym=arrQ;gene_synonym=ECK1548;gene_synonym=JW1546;gene_synonym=ydfQ;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=Qin prophage%3B putative lysozyme;protein_id=AAC74627.1;db_xref=GI:1787836;db_xref=ASAP:ABE-0005189;db_xref=UniProtKB/Swiss-Prot:P76159;db_xref=EcoGene:EG13829 EMBL gene 1640054 1640365 . - . ID=.3409;gene=ydfR;locus_tag=b1555;gene_synonym=ECK1549;gene_synonym=JW1547;db_xref=EcoGene:EG13830 EMBL CDS 1640054 1640365 . - 0 ID=.3410;gene=ydfR;locus_tag=b1555;gene_synonym=ECK1549;gene_synonym=JW1547;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=Qin prophage%3B uncharacterized protein;protein_id=AAC74628.1;db_xref=GI:1787837;db_xref=ASAP:ABE-0005192;db_xref=UniProtKB/Swiss-Prot:P76160;db_xref=EcoGene:EG13830 EMBL gene 1640370 1640585 . - . ID=.3411;gene=essQ;locus_tag=b1556;gene_synonym=ECK1550;gene_synonym=JW5255;gene_synonym=ydfS;db_xref=EcoGene:EG13831 EMBL CDS 1640370 1640585 . - 0 ID=.3412;gene=essQ;locus_tag=b1556;gene_synonym=ECK1550;gene_synonym=JW5255;gene_synonym=ydfS;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=Qin prophage%3B putative S lysis protein;protein_id=AAC74629.2;db_xref=GI:87081934;db_xref=ASAP:ABE-0005197;db_xref=UniProtKB/Swiss-Prot:P77237;db_xref=EcoGene:EG13831 EMBL gene 1641339 1641554 . - . ID=.3413;gene=cspB;locus_tag=b1557;gene_synonym=ECK1551;gene_synonym=JW1549;db_xref=EcoGene:EG12203 EMBL CDS 1641339 1641554 . - 0 ID=.3414;gene=cspB;locus_tag=b1557;gene_synonym=ECK1551;gene_synonym=JW1549;function=phenotype%3B Adaptations%2C atypical conditions%3B Phage or Prophage Related;codon_start=1;transl_table=11;product=Qin prophage%3B cold shock protein;protein_id=AAC74630.1;db_xref=GI:1787839;db_xref=ASAP:ABE-0005199;db_xref=UniProtKB/Swiss-Prot:P36995;db_xref=EcoGene:EG12203 EMBL gene 1641855 1642067 . + . ID=.3415;gene=cspF;locus_tag=b1558;gene_synonym=ECK1552;gene_synonym=JW1550;db_xref=EcoGene:EG12205 EMBL CDS 1641855 1642067 . + 0 ID=.3416;gene=cspF;locus_tag=b1558;gene_synonym=ECK1552;gene_synonym=JW1550;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=Qin prophage%3B cold shock protein;protein_id=AAC74631.1;db_xref=GI:1787840;db_xref=ASAP:ABE-0005205;db_xref=UniProtKB/Swiss-Prot:P0A976;db_xref=EcoGene:EG12205 EMBL gene 1642489 1643241 . - . ID=.3417;gene=quuQ;locus_tag=b1559;gene_synonym=ECK1553;gene_synonym=JW1551;gene_synonym=ydfT;db_xref=EcoGene:EG13832 EMBL CDS 1642489 1643241 . - 0 ID=.3418;gene=quuQ;locus_tag=b1559;gene_synonym=ECK1553;gene_synonym=JW1551;gene_synonym=ydfT;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=Qin prophage%3B putative antitermination protein Q;protein_id=AAC74632.2;db_xref=GI:87081935;db_xref=ASAP:ABE-0005207;db_xref=UniProtKB/Swiss-Prot:P76161;db_xref=EcoGene:EG13832 EMBL gene 1643255 1644304 . - . ID=.3419;gene=ydfU;locus_tag=b1560;gene_synonym=ECK1554;gene_synonym=JW5909;db_xref=EcoGene:EG13833 EMBL CDS 1643255 1644304 . - 0 ID=.3420;gene=ydfU;locus_tag=b1560;gene_synonym=ECK1554;gene_synonym=JW5909;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=Qin prophage%3B uncharacterized protein;protein_id=AAC74633.4;db_xref=GI:226510943;db_xref=ASAP:ABE-0005209;db_xref=UniProtKB/Swiss-Prot:P76162;db_xref=EcoGene:EG13833 EMBL gene 1644651 1644902 . - . ID=.3421;gene=rem;locus_tag=b1561;gene_synonym=ECK1555;gene_synonym=JW1553;db_xref=EcoGene:EG11129 EMBL CDS 1644651 1644902 . - 0 ID=.3422;gene=rem;locus_tag=b1561;gene_synonym=ECK1555;gene_synonym=JW1553;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=Qin prophage%3B uncharacterized protein;protein_id=AAC74634.1;db_xref=GI:1787844;db_xref=ASAP:ABE-0005215;db_xref=UniProtKB/Swiss-Prot:P07010;db_xref=EcoGene:EG11129 EMBL gene 1645119 1645274 . - . ID=.3423;gene=hokD;locus_tag=b1562;gene_synonym=ECK1556;gene_synonym=JW1554;gene_synonym=relF;db_xref=EcoGene:EG11130 EMBL CDS 1645119 1645274 . - 0 ID=.3424;gene=hokD;locus_tag=b1562;gene_synonym=ECK1556;gene_synonym=JW1554;gene_synonym=relF;function=factor%3B Cell killing;note=polypeptide destructive to membrane potential%3B hokD (relF) regulatory elements are deleted%2C and the gene is fused to the relBE transcript%3B evolutionary relic?;codon_start=1;transl_table=11;product=Qin prophage%3B small toxic polypeptide;protein_id=AAC74635.1;db_xref=GI:1787845;db_xref=ASAP:ABE-0005219;db_xref=UniProtKB/Swiss-Prot:P0ACG6;db_xref=EcoGene:EG11130 EMBL gene 1645346 1645633 . - . ID=.3425;gene=relE;locus_tag=b1563;gene_synonym=ECK1557;gene_synonym=JW1555;db_xref=EcoGene:EG11131 EMBL CDS 1645346 1645633 . - 0 ID=.3426;gene=relE;locus_tag=b1563;gene_synonym=ECK1557;gene_synonym=JW1555;function=Phage or Prophage Related;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=Qin prophage%3B toxin of the RelE-RelB toxin-antitoxin system;protein_id=AAC74636.1;db_xref=GI:1787846;db_xref=ASAP:ABE-0005221;db_xref=UniProtKB/Swiss-Prot:P0C077;db_xref=EcoGene:EG11131 EMBL gene 1645633 1645872 . - . ID=.3427;gene=relB;locus_tag=b1564;gene_synonym=ECK1558;gene_synonym=JW1556;gene_synonym=RC;db_xref=EcoGene:EG10836 EMBL CDS 1645633 1645872 . - 0 ID=.3428;gene=relB;locus_tag=b1564;gene_synonym=ECK1558;gene_synonym=JW1556;gene_synonym=RC;function=regulator%3B Global regulatory functions%3B Phage or Prophage Related;note=negative regulator of translation%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=antitoxin of the RelE-RelB toxin-antitoxin syste%3B transcriptional repressor;protein_id=AAC74637.1;db_xref=GI:1787847;db_xref=ASAP:ABE-0005224;db_xref=UniProtKB/Swiss-Prot:P0C079;db_xref=EcoGene:EG10836 EMBL gene 1645897 1646202 . + . ID=.3429;gene=ydfV;locus_tag=b1565;gene_synonym=ECK1559;gene_synonym=JW1557;db_xref=EcoGene:EG13834 EMBL CDS 1645897 1646202 . + 0 ID=.3430;gene=ydfV;locus_tag=b1565;gene_synonym=ECK1559;gene_synonym=JW1557;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=Qin prophage%3B uncharacterized protein;protein_id=AAC74638.1;db_xref=GI:1787848;db_xref=ASAP:ABE-0005231;db_xref=UniProtKB/Swiss-Prot:P76163;db_xref=EcoGene:EG13834 EMBL gene 1646405 1646737 . + . ID=.3431;gene=flxA;locus_tag=b1566;gene_synonym=ECK1560;gene_synonym=JW1558;db_xref=EcoGene:EG13429 EMBL CDS 1646405 1646737 . + 0 ID=.3432;gene=flxA;locus_tag=b1566;gene_synonym=ECK1560;gene_synonym=JW1558;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=Qin prophage%3B uncharacterized protein;protein_id=AAC74639.1;db_xref=GI:1787849;db_xref=ASAP:ABE-0005234;db_xref=UniProtKB/Swiss-Prot:P77609;db_xref=EcoGene:EG13429 EMBL gene 1647174 1647356 . - . ID=.3433;gene=intK;locus_tag=b1567;gene_synonym=ECK1561;gene_synonym=JW1559;gene_synonym=ydfW;pseudo=true;db_xref=EcoGene:EG13835 EMBL CDS 1647174 1647356 . - 0 ID=.3434;gene=intK;locus_tag=b1567;gene_synonym=ECK1561;gene_synonym=JW1559;gene_synonym=ydfW;note=pseudogene%2C integrase fragment%2C Qin prophage%3BPhage or Prophage Related;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0005236;db_xref=UniProtKB/Swiss-Prot:P76164;db_xref=EcoGene:EG13835 EMBL gene 1647358 1647636 . - . ID=.3435;gene=ydfX;locus_tag=b1568;gene_synonym=ECK1562;gene_synonym=JW1560;pseudo=true;db_xref=EcoGene:EG13836 EMBL CDS 1647358 1647636 . - 0 ID=.3436;gene=ydfX;locus_tag=b1568;gene_synonym=ECK1562;gene_synonym=JW1560;note=pseudogene%2C Qin prophage%3BPhage or Prophage Related;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0005239;db_xref=UniProtKB/Swiss-Prot:P76165;db_xref=EcoGene:EG13836 EMBL gene 1647620 1647850 . - . ID=.3437;gene=dicC;locus_tag=b1569;gene_synonym=ECK1563;gene_synonym=ftsT;gene_synonym=JW1561;db_xref=EcoGene:EG10228 EMBL CDS 1647620 1647850 . - 0 ID=.3438;gene=dicC;locus_tag=b1569;gene_synonym=ECK1563;gene_synonym=ftsT;gene_synonym=JW1561;function=regulator%3B Cell division%3B Phage or Prophage Related;note=regulator of dicB;codon_start=1;transl_table=11;product=Qin prophage%3B DNA-binding transcriptional regulator for DicB;protein_id=AAC74642.1;db_xref=GI:1787852;db_xref=ASAP:ABE-0005244;db_xref=UniProtKB/Swiss-Prot:P06965;db_xref=EcoGene:EG10228 EMBL gene 1647934 1648341 . + . ID=.3439;gene=dicA;locus_tag=b1570;gene_synonym=ECK1564;gene_synonym=ftsT;gene_synonym=JW1562;db_xref=EcoGene:EG10226 EMBL CDS 1647934 1648341 . + 0 ID=.3440;gene=dicA;locus_tag=b1570;gene_synonym=ECK1564;gene_synonym=ftsT;gene_synonym=JW1562;function=regulator%3B Cell division%3B Phage or Prophage Related;note=regulator of dicB;codon_start=1;transl_table=11;product=Qin prophage%3B putative regulator for DicB;protein_id=AAC74643.1;db_xref=GI:1787853;db_xref=ASAP:ABE-0005248;db_xref=UniProtKB/Swiss-Prot:P06966;db_xref=EcoGene:EG10226 EMBL gene 1648508 1648663 . + . ID=.3441;gene=ydfA;locus_tag=b1571;gene_synonym=ECK1565;gene_synonym=JW1563;db_xref=EcoGene:EG11300 EMBL CDS 1648508 1648663 . + 0 ID=.3442;gene=ydfA;locus_tag=b1571;gene_synonym=ECK1565;gene_synonym=JW1563;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=Qin prophage%3B uncharacterized protein;protein_id=AAC74644.1;db_xref=GI:1787854;db_xref=ASAP:ABE-0005251;db_xref=UniProtKB/Swiss-Prot:P0ACW8;db_xref=EcoGene:EG11300 EMBL gene 1648665 1648793 . + . ID=.3443;gene=ydfB;locus_tag=b1572;gene_synonym=ECK1566;gene_synonym=JW1564;db_xref=EcoGene:EG11301 EMBL CDS 1648665 1648793 . + 0 ID=.3444;gene=ydfB;locus_tag=b1572;gene_synonym=ECK1566;gene_synonym=JW1564;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=Qin prophage%3B uncharacterized protein;protein_id=AAC74645.2;db_xref=GI:87081937;db_xref=ASAP:ABE-0005253;db_xref=UniProtKB/Swiss-Prot:P29009;db_xref=EcoGene:EG11301 EMBL gene 1648823 1649041 . + . ID=.3445;gene=ydfC;locus_tag=b1573;gene_synonym=ECK1567;gene_synonym=JW1565;db_xref=EcoGene:EG11302 EMBL CDS 1648823 1649041 . + 0 ID=.3446;gene=ydfC;locus_tag=b1573;gene_synonym=ECK1567;gene_synonym=JW1565;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=uncharacterized protein%2C Qin prophage;protein_id=AAC74646.1;db_xref=GI:1787856;db_xref=ASAP:ABE-0005255;db_xref=UniProtKB/Swiss-Prot:P21418;db_xref=EcoGene:EG11302 EMBL gene 1649382 1649434 . + . ID=.3447;gene=dicF;locus_tag=b1574;gene_synonym=ECK1568;gene_synonym=JWR0030;db_xref=EcoGene:EG31115 EMBL ncRNA 1649382 1649434 . + . ID=.3448;ncrna_class=antisense_RNA;gene=dicF;locus_tag=b1574;gene_synonym=ECK1568;gene_synonym=JWR0030;product=sRNA antisense regulator%2C inhibits ftsZ%2C Hfq-dependent%3B Qin prophage;note=DicF antisense RNA%2C inhibits ftsZ translation;db_xref=ASAP:ABE-0005257;db_xref=EcoGene:EG31115 EMBL gene 1649609 1649797 . + . ID=.3449;gene=dicB;locus_tag=b1575;gene_synonym=ECK1569;gene_synonym=ftsT;gene_synonym=JW1566;db_xref=EcoGene:EG10227 EMBL CDS 1649609 1649797 . + 0 ID=.3450;gene=dicB;locus_tag=b1575;gene_synonym=ECK1569;gene_synonym=ftsT;gene_synonym=JW1566;function=regulator%3B Cell division%3B Phage or Prophage Related;note=inhibition of cell division;codon_start=1;transl_table=11;product=Qin prophage%3B cell division inhibition protein;protein_id=AAC74647.1;db_xref=GI:1787857;db_xref=ASAP:ABE-0005260;db_xref=UniProtKB/Swiss-Prot:P09557;db_xref=EcoGene:EG10227 EMBL gene 1649794 1649985 . + . ID=.3451;gene=ydfD;locus_tag=b1576;gene_synonym=ECK1570;gene_synonym=JW1567;db_xref=EcoGene:EG11303 EMBL CDS 1649794 1649985 . + 0 ID=.3452;gene=ydfD;locus_tag=b1576;gene_synonym=ECK1570;gene_synonym=JW1567;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=Qin prophage%3B uncharacterized protein;protein_id=AAC74648.1;db_xref=GI:1787858;db_xref=ASAP:ABE-0005262;db_xref=UniProtKB/Swiss-Prot:P29010;db_xref=EcoGene:EG11303 EMBL gene 1650078 1650842 . + . ID=.3453;gene=ydfE;locus_tag=b1577;gene_synonym=ECK1571;gene_synonym=JW1568;pseudo=true;db_xref=EcoGene:EG11304 EMBL CDS 1650078 1650842 . + 0 ID=.3454;gene=ydfE;locus_tag=b1577;gene_synonym=ECK1571;gene_synonym=JW1568;note=Qin prophage%3B pseudogene%3BPhage or Prophage Related;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0005265;db_xref=UniProtKB/Swiss-Prot:Q47138;db_xref=EcoGene:EG11304 EMBL sequence_feature 1650843 1651548 . + . ID=.3455;note=*mobile_element_type: insertion sequence:IS2E EMBL gene 1650845 1651537 . + . ID=.3456;gene=insD1;locus_tag=b1578;gene_synonym=ECK0358;pseudo=true;db_xref=EcoGene:EG40004 EMBL CDS 1650845 1651537 . + 0 ID=.3457;gene=insD1;locus_tag=b1578;gene_synonym=ECK0358;note=IS2 transposase TnpB%3BIS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0005268;db_xref=UniProtKB/Swiss-Prot:P0CF60;db_xref=EcoGene:EG40004 EMBL gene 1651551 1652708 . + . ID=.3458;gene=intQ;locus_tag=b1579;gene_synonym=ECK1573;gene_synonym=JW1571;pseudo=true;db_xref=EcoGene:EG13188 EMBL CDS 1651551 1652708 . + 0 ID=.3459;gene=intQ;locus_tag=b1579;gene_synonym=ECK1573;gene_synonym=JW1571;note=pseudogene%2C Qin prophage%3B phage integrase family%3BPhage or Prophage Related;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0005270;db_xref=UniProtKB/Swiss-Prot:P76168;db_xref=EcoGene:EG13188 EMBL gene 1652896 1653915 . - . ID=.3460;gene=rspB;locus_tag=b1580;gene_synonym=ECK1575;gene_synonym=JW1572;db_xref=EcoGene:EG12452 EMBL CDS 1652896 1653915 . - 0 ID=.3461;gene=rspB;locus_tag=b1580;gene_synonym=ECK1575;gene_synonym=JW1572;function=enzyme%3B Global regulatory functions;note=starvation sensing protein%3B GO_process: GO:0042594 - response to starvation;codon_start=1;transl_table=11;product=putative Zn-dependent NAD(P)-binding oxidoreductase;protein_id=AAC74652.1;db_xref=GI:1787863;db_xref=ASAP:ABE-0005272;db_xref=UniProtKB/Swiss-Prot:P38105;db_xref=EcoGene:EG12452 EMBL gene 1653927 1655141 . - . ID=.3462;gene=rspA;locus_tag=b1581;gene_synonym=ECK1576;gene_synonym=JW1573;db_xref=EcoGene:EG12451 EMBL CDS 1653927 1655141 . - 0 ID=.3463;gene=rspA;locus_tag=b1581;gene_synonym=ECK1576;gene_synonym=JW1573;function=phenotype%3B Global regulatory functions;note=starvation sensing protein%3B GO_process: GO:0042594 - response to starvation;codon_start=1;transl_table=11;product=bifunctional D-altronate/D-mannonate dehydratase;protein_id=AAC74653.1;db_xref=GI:1787864;db_xref=ASAP:ABE-0005275;db_xref=UniProtKB/Swiss-Prot:P38104;db_xref=EcoGene:EG12451 EMBL gene 1655347 1655673 . - . ID=.3464;gene=ynfA;locus_tag=b1582;gene_synonym=ECK1577;gene_synonym=JW1574;db_xref=EcoGene:EG13839 EMBL CDS 1655347 1655673 . - 0 ID=.3465;gene=ynfA;locus_tag=b1582;gene_synonym=ECK1577;gene_synonym=JW1574;note=GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=UPF0060 family inner membrane protein;protein_id=AAC74654.1;db_xref=GI:1787865;db_xref=ASAP:ABE-0005279;db_xref=UniProtKB/Swiss-Prot:P76169;db_xref=EcoGene:EG13839 EMBL gene 1655808 1656149 . + . ID=.3466;gene=ynfB;locus_tag=b1583;gene_synonym=ECK1578;gene_synonym=JW1575;db_xref=EcoGene:EG13840 EMBL CDS 1655808 1656149 . + 0 ID=.3467;gene=ynfB;locus_tag=b1583;gene_synonym=ECK1578;gene_synonym=JW1575;codon_start=1;transl_table=11;product=UPF0482 family putative periplasmic protein;protein_id=AAC74655.1;db_xref=GI:1787866;db_xref=ASAP:ABE-0005284;db_xref=UniProtKB/Swiss-Prot:P76170;db_xref=EcoGene:EG13840 EMBL gene 1656184 1656744 . + . ID=.3468;gene=speG;locus_tag=b1584;gene_synonym=ECK1579;gene_synonym=JW1576;db_xref=EcoGene:EG12447 EMBL CDS 1656184 1656744 . + 0 ID=.3469;gene=speG;locus_tag=b1584;gene_synonym=ECK1579;gene_synonym=JW1576;ec_number=2.3.1.57;function=enzyme%3B Central intermediary metabolism: Polyamine biosynthesis;note=GO_process: GO:0006596 - polyamine biosynthetic process;codon_start=1;transl_table=11;product=spermidine N(1)-acetyltransferase;protein_id=AAC74656.1;db_xref=GI:1787867;db_xref=ASAP:ABE-0005286;db_xref=UniProtKB/Swiss-Prot:P0A951;db_xref=EcoGene:EG12447 EMBL gene 1656747 1657457 . - . ID=.3470;gene=ynfC;locus_tag=b1585;gene_synonym=ECK1580;gene_synonym=JW5258;db_xref=EcoGene:EG13841 EMBL CDS 1656747 1657457 . - 0 ID=.3471;gene=ynfC;locus_tag=b1585;gene_synonym=ECK1580;gene_synonym=JW5258;codon_start=1;transl_table=11;product=UPF0257 family lipoprotein;protein_id=AAC74657.2;db_xref=GI:87081939;db_xref=ASAP:ABE-0005288;db_xref=UniProtKB/Swiss-Prot:P67553;db_xref=EcoGene:EG13841 EMBL gene 1657565 1657870 . + . ID=.3472;gene=ynfD;locus_tag=b1586;gene_synonym=ECK1581;gene_synonym=JW5259;db_xref=EcoGene:EG13842 EMBL CDS 1657565 1657870 . + 0 ID=.3473;gene=ynfD;locus_tag=b1586;gene_synonym=ECK1581;gene_synonym=JW5259;codon_start=1;transl_table=11;product=DUF1161 family periplasmic protein;protein_id=AAC74658.2;db_xref=GI:87081940;db_xref=ASAP:ABE-0005297;db_xref=UniProtKB/Swiss-Prot:P76172;db_xref=EcoGene:EG13842 EMBL repeat_region 1657888 1657908 . + . ID=.3474;note=REP124 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 1658069 1660495 . + . ID=.3475;gene=ynfE;locus_tag=b1587;gene_synonym=ECK1582;gene_synonym=JW1579;db_xref=EcoGene:EG13843 EMBL CDS 1658069 1660495 . + 0 ID=.3476;gene=ynfE;locus_tag=b1587;gene_synonym=ECK1582;gene_synonym=JW1579;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=putative selenate reductase%2C periplasmic;protein_id=AAC74659.1;db_xref=GI:1787870;db_xref=ASAP:ABE-0005302;db_xref=UniProtKB/Swiss-Prot:P77374;db_xref=EcoGene:EG13843 EMBL gene 1660556 1662979 . + . ID=.3477;gene=ynfF;locus_tag=b1588;gene_synonym=ECK1583;gene_synonym=JW5260;db_xref=EcoGene:EG13844 EMBL CDS 1660556 1662979 . + 0 ID=.3478;gene=ynfF;locus_tag=b1588;gene_synonym=ECK1583;gene_synonym=JW5260;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=S- and N-oxide reductase%2C A subunit%2C periplasmic;protein_id=AAC74660.4;db_xref=GI:171474008;db_xref=ASAP:ABE-0005307;db_xref=UniProtKB/Swiss-Prot:P77783;db_xref=EcoGene:EG13844 EMBL gene 1662990 1663607 . + . ID=.3479;gene=ynfG;locus_tag=b1589;gene_synonym=ECK1584;gene_synonym=JW1581;db_xref=EcoGene:EG13845 EMBL CDS 1662990 1663607 . + 0 ID=.3480;gene=ynfG;locus_tag=b1589;gene_synonym=ECK1584;gene_synonym=JW1581;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=oxidoreductase%2C Fe-S subunit;protein_id=AAC74661.1;db_xref=GI:1787872;db_xref=ASAP:ABE-0005309;db_xref=UniProtKB/Swiss-Prot:P0AAJ1;db_xref=EcoGene:EG13845 EMBL gene 1663609 1664463 . + . ID=.3481;gene=ynfH;locus_tag=b1590;gene_synonym=ECK1585;gene_synonym=JW5261;db_xref=EcoGene:EG13846 EMBL CDS 1663609 1664463 . + 0 ID=.3482;gene=ynfH;locus_tag=b1590;gene_synonym=ECK1585;gene_synonym=JW5261;function=putative enzyme%3B Degradation of small molecules: Carbon compounds;note=GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=oxidoreductase%2C membrane subunit;protein_id=AAC74662.1;db_xref=GI:1787873;db_xref=ASAP:ABE-0005311;db_xref=UniProtKB/Swiss-Prot:P76173;db_xref=EcoGene:EG13846 EMBL gene 1664506 1665120 . + . ID=.3483;gene=dmsD;locus_tag=b1591;gene_synonym=ECK1586;gene_synonym=JW5262;gene_synonym=ynfI;db_xref=EcoGene:EG13847 EMBL CDS 1664506 1665120 . + 0 ID=.3484;gene=dmsD;locus_tag=b1591;gene_synonym=ECK1586;gene_synonym=JW5262;gene_synonym=ynfI;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=twin-argninine leader-binding protein for DmsA and TorA;protein_id=AAC74663.2;db_xref=GI:87081942;db_xref=ASAP:ABE-0005314;db_xref=UniProtKB/Swiss-Prot:P69853;db_xref=EcoGene:EG13847 EMBL repeat_region 1665136 1665166 . + . ID=.3485;note=REP125 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 1665315 1666571 . + . ID=.3486;gene=clcB;locus_tag=b1592;gene_synonym=ECK1587;gene_synonym=JW5263;gene_synonym=mriT;gene_synonym=ynfJ;db_xref=EcoGene:EG13848 EMBL CDS 1665315 1666571 . + 0 ID=.3487;gene=clcB;locus_tag=b1592;gene_synonym=ECK1587;gene_synonym=JW5263;gene_synonym=mriT;gene_synonym=ynfJ;function=transport%3B Not classified;codon_start=1;transl_table=11;product=H(+)/Cl(-) exchange transporter;protein_id=AAC74664.2;db_xref=GI:87081943;db_xref=ASAP:ABE-0005317;db_xref=UniProtKB/Swiss-Prot:P76175;db_xref=EcoGene:EG13848 EMBL gene 1666524 1667219 . - . ID=.3488;gene=ynfK;locus_tag=b1593;gene_synonym=ECK1588;gene_synonym=JW5264;db_xref=EcoGene:EG13849 EMBL CDS 1666524 1667219 . - 0 ID=.3489;gene=ynfK;locus_tag=b1593;gene_synonym=ECK1588;gene_synonym=JW5264;note=GO_process: GO:0009102 - biotin biosynthetic process;codon_start=1;transl_table=11;product=putative dethiobiotin synthetase;protein_id=AAC74665.2;db_xref=GI:87081944;db_xref=ASAP:ABE-0005319;db_xref=UniProtKB/Swiss-Prot:P0A6E9;db_xref=EcoGene:EG13849 EMBL gene 1667344 1668564 . - . ID=.3490;gene=mlc;locus_tag=b1594;gene_synonym=dgsA;gene_synonym=ECK1589;gene_synonym=JW1586;db_xref=EcoGene:EG13156 EMBL CDS 1667344 1668564 . - 0 ID=.3491;gene=mlc;locus_tag=b1594;gene_synonym=dgsA;gene_synonym=ECK1589;gene_synonym=JW1586;function=regulator%3B Not classified;note=putative NAGC-like transcriptional regulator%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0000271 - polysaccharide biosynthetic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=glucosamine anaerobic growth regulon transcriptional repressor%3B autorepressor;protein_id=AAC74666.1;db_xref=GI:1787878;db_xref=ASAP:ABE-0005323;db_xref=UniProtKB/Swiss-Prot:P50456;db_xref=EcoGene:EG13156 EMBL gene 1668699 1669592 . - . ID=.3492;gene=ynfL;locus_tag=b1595;gene_synonym=ECK1590;gene_synonym=JW1587;db_xref=EcoGene:EG13850 EMBL CDS 1668699 1669592 . - 0 ID=.3493;gene=ynfL;locus_tag=b1595;gene_synonym=ECK1590;gene_synonym=JW1587;function=putative regulator%3B Not classified;note=putative transcriptional regulator LYSR-type%3B GO_process: GO:0006355 - regulation of transcription%2C DNA-dependent;codon_start=1;transl_table=11;product=LysR family putative transcriptional regulator;protein_id=AAC74667.1;db_xref=GI:1787879;db_xref=ASAP:ABE-0005326;db_xref=UniProtKB/Swiss-Prot:P77559;db_xref=EcoGene:EG13850 EMBL gene 1669699 1670952 . + . ID=.3494;gene=ynfM;locus_tag=b1596;gene_synonym=ECK1591;gene_synonym=JW1588;gene_synonym=yzyC;db_xref=EcoGene:EG12951 EMBL CDS 1669699 1670952 . + 0 ID=.3495;gene=ynfM;locus_tag=b1596;gene_synonym=ECK1591;gene_synonym=JW1588;gene_synonym=yzyC;function=putative transport%3B Not classified;note=putative transport protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative arabinose efflux transporter;protein_id=AAC74668.1;db_xref=GI:1787880;db_xref=ASAP:ABE-0005333;db_xref=UniProtKB/Swiss-Prot:P43531;db_xref=EcoGene:EG12951 EMBL gene 1671376 1671684 . + . ID=.3496;gene=asr;locus_tag=b1597;gene_synonym=ECK1592;gene_synonym=JW5826;db_xref=EcoGene:EG12149 EMBL CDS 1671376 1671684 . + 0 ID=.3497;gene=asr;locus_tag=b1597;gene_synonym=ECK1592;gene_synonym=JW5826;function=phenotype%3B Not classified;note=acid shock protein%3B GO_process: GO:0009268 - response to pH;codon_start=1;transl_table=11;product=acid shock-inducible periplasmic protein;protein_id=AAC74669.2;db_xref=GI:87081945;db_xref=ASAP:ABE-0005337;db_xref=UniProtKB/Swiss-Prot:P36560;db_xref=EcoGene:EG12149 EMBL gene 1671777 1671860 . + . ID=.3498;gene=ydgU;locus_tag=b4601;gene_synonym=ECK4410;db_xref=EcoGene:EG14462 EMBL CDS 1671777 1671860 . + 0 ID=.3499;gene=ydgU;locus_tag=b4601;gene_synonym=ECK4410;codon_start=1;transl_table=11;product=stationary phase-induced protein;protein_id=ABP93446.1;db_xref=GI:145693139;db_xref=UniProtKB/Swiss-Prot:A5A617;db_xref=EcoGene:EG14462 EMBL gene 1671960 1672781 . + . ID=.3500;gene=ydgD;locus_tag=b1598;gene_synonym=ECK1593;gene_synonym=JW1590;db_xref=EcoGene:EG13925 EMBL CDS 1671960 1672781 . + 0 ID=.3501;gene=ydgD;locus_tag=b1598;gene_synonym=ECK1593;gene_synonym=JW1590;codon_start=1;transl_table=11;product=putative peptidase;protein_id=AAC74670.1;db_xref=GI:1787882;db_xref=ASAP:ABE-0005340;db_xref=UniProtKB/Swiss-Prot:P76176;db_xref=EcoGene:EG13925 EMBL gene 1672820 1673149 . - . ID=.3502;gene=mdtI;locus_tag=b1599;gene_synonym=ECK1594;gene_synonym=JW1591;gene_synonym=ydgE;db_xref=EcoGene:EG13926 EMBL CDS 1672820 1673149 . - 0 ID=.3503;gene=mdtI;locus_tag=b1599;gene_synonym=ECK1594;gene_synonym=JW1591;gene_synonym=ydgE;function=putative factor%3B Not classified;note=possible chaperone;codon_start=1;transl_table=11;product=multidrug efflux system transporter;protein_id=AAC74671.1;db_xref=GI:1787883;db_xref=ASAP:ABE-0005343;db_xref=UniProtKB/Swiss-Prot:P69210;db_xref=EcoGene:EG13926 EMBL gene 1673136 1673501 . - . ID=.3504;gene=mdtJ;locus_tag=b1600;gene_synonym=ECK1595;gene_synonym=JW1592;gene_synonym=ydgF;db_xref=EcoGene:EG13927 EMBL CDS 1673136 1673501 . - 0 ID=.3505;gene=mdtJ;locus_tag=b1600;gene_synonym=ECK1595;gene_synonym=JW1592;gene_synonym=ydgF;function=putative factor%3B Not classified;note=possible chaperone%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=multidrug efflux system transporter;protein_id=AAC74672.1;db_xref=GI:1787884;db_xref=ASAP:ABE-0005345;db_xref=UniProtKB/Swiss-Prot:P69212;db_xref=EcoGene:EG13927 EMBL gene 1673913 1674947 . + . ID=.3506;gene=tqsA;locus_tag=b1601;gene_synonym=ECK1596;gene_synonym=JW1593;gene_synonym=ydgG;db_xref=EcoGene:EG13928 EMBL CDS 1673913 1674947 . + 0 ID=.3507;gene=tqsA;locus_tag=b1601;gene_synonym=ECK1596;gene_synonym=JW1593;gene_synonym=ydgG;function=putative transport%3B Not classified;note=putative transport protein;codon_start=1;transl_table=11;product=pheromone AI-2 transporter;protein_id=AAC74673.1;db_xref=GI:1787885;db_xref=ASAP:ABE-0005350;db_xref=UniProtKB/Swiss-Prot:P0AFS5;db_xref=EcoGene:EG13928 EMBL gene 1674972 1676360 . - . ID=.3508;gene=pntB;locus_tag=b1602;gene_synonym=ECK1597;gene_synonym=JW1594;db_xref=EcoGene:EG10745 EMBL CDS 1674972 1676360 . - 0 ID=.3509;gene=pntB;locus_tag=b1602;gene_synonym=ECK1597;gene_synonym=JW1594;ec_number=1.6.1.2;function=enzyme%3B Central intermediary metabolism: Pool%2C multipurpose conversions;experiment=N-terminus verified by Edman degradation: PMID 3525165;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=pyridine nucleotide transhydrogenase%2C beta subunit;protein_id=AAC74674.1;db_xref=GI:1787886;db_xref=ASAP:ABE-0005352;db_xref=UniProtKB/Swiss-Prot:P0AB67;db_xref=EcoGene:EG10745 EMBL gene 1676371 1677903 . - . ID=.3510;gene=pntA;locus_tag=b1603;gene_synonym=ECK1598;gene_synonym=JW1595;db_xref=EcoGene:EG10744 EMBL CDS 1676371 1677903 . - 0 ID=.3511;gene=pntA;locus_tag=b1603;gene_synonym=ECK1598;gene_synonym=JW1595;ec_number=1.6.1.2;function=enzyme%3B Central intermediary metabolism: Pool%2C multipurpose conversions;experiment=N-terminus verified by Edman degradation: PMID 3525165;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=pyridine nucleotide transhydrogenase%2C alpha subunit;protein_id=AAC74675.1;db_xref=GI:1787887;db_xref=ASAP:ABE-0005354;db_xref=UniProtKB/Swiss-Prot:P07001;db_xref=EcoGene:EG10744 EMBL gene 1678427 1679371 . + . ID=.3512;gene=ydgH;locus_tag=b1604;gene_synonym=ECK1599;gene_synonym=JW1596;db_xref=EcoGene:EG13929 EMBL CDS 1678427 1679371 . + 0 ID=.3513;gene=ydgH;locus_tag=b1604;gene_synonym=ECK1599;gene_synonym=JW1596;codon_start=1;transl_table=11;product=DUF1471 family periplasmic protein;protein_id=AAC74676.1;db_xref=GI:1787889;db_xref=ASAP:ABE-0005359;db_xref=UniProtKB/Swiss-Prot:P76177;db_xref=EcoGene:EG13929 EMBL gene 1679557 1680939 . + . ID=.3514;gene=ydgI;locus_tag=b1605;gene_synonym=arcD;gene_synonym=ECK1600;gene_synonym=JW1597;db_xref=EcoGene:EG13930 EMBL CDS 1679557 1680939 . + 0 ID=.3515;gene=ydgI;locus_tag=b1605;gene_synonym=arcD;gene_synonym=ECK1600;gene_synonym=JW1597;function=putative transport%3B Not classified;note=putative arginine/ornithine antiporter%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative arginine/ornithine antiporter transporter;protein_id=AAC74677.1;db_xref=GI:1787890;db_xref=ASAP:ABE-0005362;db_xref=UniProtKB/Swiss-Prot:P0AAE5;db_xref=EcoGene:EG13930 EMBL gene 1680976 1681698 . + . ID=.3516;gene=folM;locus_tag=b1606;gene_synonym=ECK1601;gene_synonym=JW1598;gene_synonym=ydgB;db_xref=EcoGene:EG13189 EMBL CDS 1680976 1681698 . + 0 ID=.3517;gene=folM;locus_tag=b1606;gene_synonym=ECK1601;gene_synonym=JW1598;gene_synonym=ydgB;ec_number=1.5.1.3;function=enzyme%3B Not classified;note=putative oxidoreductase;codon_start=1;transl_table=11;product=dihydromonapterin reductase%2C NADPH-dependent%3B dihydrofolate reductase isozyme;protein_id=AAC74678.1;db_xref=GI:1787891;db_xref=ASAP:ABE-0005364;db_xref=UniProtKB/Swiss-Prot:P0AFS3;db_xref=EcoGene:EG13189 EMBL gene 1681695 1682030 . - . ID=.3518;gene=ydgC;locus_tag=b1607;gene_synonym=ECK1602;gene_synonym=JW1599;db_xref=EcoGene:EG13191 EMBL CDS 1681695 1682030 . - 0 ID=.3519;gene=ydgC;locus_tag=b1607;gene_synonym=ECK1602;gene_synonym=JW1599;note=GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=GlpM family inner membrane protein;protein_id=AAC74679.1;db_xref=GI:1787892;db_xref=ASAP:ABE-0005366;db_xref=UniProtKB/Swiss-Prot:P0ACX0;db_xref=EcoGene:EG13191 EMBL gene 1682159 1682878 . + . ID=.3520;gene=rstA;locus_tag=b1608;gene_synonym=ECK1603;gene_synonym=JW1600;gene_synonym=urpT;db_xref=EcoGene:EG13190 EMBL CDS 1682159 1682878 . + 0 ID=.3521;gene=rstA;locus_tag=b1608;gene_synonym=ECK1603;gene_synonym=JW1600;gene_synonym=urpT;function=regulator%3B Not classified;note=response transcriptional regulatory protein (RstB sensor)%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=response regulator of RstAB two-component system;protein_id=AAC74680.2;db_xref=GI:145693140;db_xref=ASAP:ABE-0005370;db_xref=UniProtKB/Swiss-Prot:P52108;db_xref=EcoGene:EG13190 EMBL gene 1682882 1684183 . + . ID=.3522;gene=rstB;locus_tag=b1609;gene_synonym=ECK1604;gene_synonym=JW1601;gene_synonym=uspT;db_xref=EcoGene:EG11233 EMBL CDS 1682882 1684183 . + 0 ID=.3523;gene=rstB;locus_tag=b1609;gene_synonym=ECK1604;gene_synonym=JW1601;gene_synonym=uspT;function=regulator%3B Global regulatory functions;note=sensor histidine protein kinase (RstA regulator)%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=sensory histidine kinase of RstAB two-component system;protein_id=AAC74681.1;db_xref=GI:1787894;db_xref=ASAP:ABE-0005372;db_xref=UniProtKB/Swiss-Prot:P18392;db_xref=EcoGene:EG11233 EMBL gene 1684259 1685188 . + . ID=.3524;gene=tus;locus_tag=b1610;gene_synonym=ECK1605;gene_synonym=JW1602;gene_synonym=tau;db_xref=EcoGene:EG11038 EMBL CDS 1684259 1685188 . + 0 ID=.3525;gene=tus;locus_tag=b1610;gene_synonym=ECK1605;gene_synonym=JW1602;gene_synonym=tau;function=factor%3B DNA - replication%2C repair%2C restriction/modification;note=DNA-binding protein%3B inhibition of replication at Ter sites%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006261 - DNA-dependent DNA replication;codon_start=1;transl_table=11;product=inhibitor of replication at Ter%2C DNA-binding protein;protein_id=AAC74682.1;db_xref=GI:1787895;db_xref=ASAP:ABE-0005378;db_xref=UniProtKB/Swiss-Prot:P16525;db_xref=EcoGene:EG11038 EMBL gene 1685185 1686588 . - . ID=.3526;gene=fumC;locus_tag=b1611;gene_synonym=ECK1606;gene_synonym=JW1603;db_xref=EcoGene:EG10358 EMBL CDS 1685185 1686588 . - 0 ID=.3527;gene=fumC;locus_tag=b1611;gene_synonym=ECK1606;gene_synonym=JW1603;ec_number=4.2.1.2;function=enzyme%3B Energy metabolism%2C carbon: TCA cycle;experiment=N-terminus verified by Edman degradation: PMID 1917897%2C8496960;note=fumarase C%3D fumarate hydratase Class II%3B isozyme%3B GO_process: GO:0006099 - tricarboxylic acid cycle%3B GO_process: GO:0006113 - fermentation%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=fumarate hydratase (fumarase C)%2Caerobic Class II;protein_id=AAC74683.1;db_xref=GI:1787896;db_xref=ASAP:ABE-0005380;db_xref=UniProtKB/Swiss-Prot:P05042;db_xref=EcoGene:EG10358 EMBL gene 1686731 1688377 . - . ID=.3528;gene=fumA;locus_tag=b1612;gene_synonym=ECK1607;gene_synonym=JW1604;db_xref=EcoGene:EG10356 EMBL CDS 1686731 1688377 . - 0 ID=.3529;gene=fumA;locus_tag=b1612;gene_synonym=ECK1607;gene_synonym=JW1604;ec_number=4.2.1.2;function=enzyme%3B Energy metabolism%2C carbon: TCA cycle;note=fumarase A %3D fumarate hydratase Class I%3B aerobic isozyme%3B GO_process: GO:0006099 - tricarboxylic acid cycle;codon_start=1;transl_table=11;product=fumarate hydratase (fumarase A)%2C aerobic Class I;protein_id=AAC74684.1;db_xref=GI:1787897;db_xref=ASAP:ABE-0005392;db_xref=UniProtKB/Swiss-Prot:P0AC33;db_xref=EcoGene:EG10356 EMBL gene 1688576 1689751 . + . ID=.3530;gene=manA;locus_tag=b1613;gene_synonym=ECK1608;gene_synonym=JW1605;gene_synonym=pmi;db_xref=EcoGene:EG10566 EMBL CDS 1688576 1689751 . + 0 ID=.3531;gene=manA;locus_tag=b1613;gene_synonym=ECK1608;gene_synonym=JW1605;gene_synonym=pmi;ec_number=5.3.1.8;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0009226 - nucleotide-sugar biosynthetic process%3B GO_process: GO:0009242 - colanic acid biosynthetic process%3B GO_process: GO:0009269 - response to desiccation;codon_start=1;transl_table=11;product=mannose-6-phosphate isomerase;protein_id=AAC74685.1;db_xref=GI:1787899;db_xref=ASAP:ABE-0005398;db_xref=UniProtKB/Swiss-Prot:P00946;db_xref=EcoGene:EG10566 EMBL gene 1689852 1691360 . + . ID=.3532;gene=ydgA;locus_tag=b1614;gene_synonym=ECK1609;gene_synonym=JW1606;db_xref=EcoGene:EG12457 EMBL CDS 1689852 1691360 . + 0 ID=.3533;gene=ydgA;locus_tag=b1614;gene_synonym=ECK1609;gene_synonym=JW1606;codon_start=1;transl_table=11;product=DUF945 family protein;protein_id=AAC74686.1;db_xref=GI:1787900;db_xref=ASAP:ABE-0005402;db_xref=UniProtKB/Swiss-Prot:P77804;db_xref=EcoGene:EG12457 EMBL repeat_region 1691425 1691521 . + . ID=.3534;note=RIP126 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 1691586 1692851 . - . ID=.3535;gene=uidC;locus_tag=b1615;gene_synonym=ECK1610;gene_synonym=gusC;gene_synonym=JW1607;db_xref=EcoGene:EG12668 EMBL CDS 1691586 1692851 . - 0 ID=.3536;gene=uidC;locus_tag=b1615;gene_synonym=ECK1610;gene_synonym=gusC;gene_synonym=JW1607;function=membrane%3B Inner membrane;note=membrane-associated protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative outer membrane porin for beta-glucuronides porin protein;protein_id=AAC74687.2;db_xref=GI:87081946;db_xref=ASAP:ABE-0005405;db_xref=UniProtKB/Swiss-Prot:Q47706;db_xref=EcoGene:EG12668 EMBL gene 1692890 1694263 . - . ID=.3537;gene=uidB;locus_tag=b1616;gene_synonym=ECK1611;gene_synonym=gusB;gene_synonym=JW1608;gene_synonym=uidP;db_xref=EcoGene:EG11658 EMBL CDS 1692890 1694263 . - 0 ID=.3538;gene=uidB;locus_tag=b1616;gene_synonym=ECK1611;gene_synonym=gusB;gene_synonym=JW1608;gene_synonym=uidP;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;experiment=N-terminus verified by Edman degradation: PMID 15774881;note=glucuronide permease%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=glucuronide transporter;protein_id=AAC74688.1;db_xref=GI:1787902;db_xref=ASAP:ABE-0005407;db_xref=UniProtKB/Swiss-Prot:P0CE44;db_xref=EcoGene:EG11658 EMBL gene 1694260 1696071 . - . ID=.3539;gene=uidA;locus_tag=b1617;gene_synonym=ECK1612;gene_synonym=gurA;gene_synonym=gusA;gene_synonym=JW1609;db_xref=EcoGene:EG11055 EMBL CDS 1694260 1696071 . - 0 ID=.3540;gene=uidA;locus_tag=b1617;gene_synonym=ECK1612;gene_synonym=gurA;gene_synonym=gusA;gene_synonym=JW1609;ec_number=3.2.1.31;function=enzyme%3B Degradation of small molecules: Carbon compounds;experiment=N-terminus verified by Edman degradation: PMID 3105604%2C3534890;note=GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=beta-D-glucuronidase;protein_id=AAC74689.1;db_xref=GI:1787903;db_xref=ASAP:ABE-0005410;db_xref=UniProtKB/Swiss-Prot:P05804;db_xref=EcoGene:EG11055 EMBL gene 1696462 1697052 . - . ID=.3541;gene=uidR;locus_tag=b1618;gene_synonym=ECK1613;gene_synonym=gusR;gene_synonym=JW1610;db_xref=EcoGene:EG12667 EMBL CDS 1696462 1697052 . - 0 ID=.3542;gene=uidR;locus_tag=b1618;gene_synonym=ECK1613;gene_synonym=gusR;gene_synonym=JW1610;function=regulator%3B Degradation of small molecules: Carbon compounds;note=repressor for uid operon%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=transcriptional repressor;protein_id=AAC74690.1;db_xref=GI:1787904;db_xref=ASAP:ABE-0005415;db_xref=UniProtKB/Swiss-Prot:P0ACT6;db_xref=EcoGene:EG12667 EMBL gene 1697273 1698040 . - . ID=.3543;gene=hdhA;locus_tag=b1619;gene_synonym=ECK1614;gene_synonym=hsd;gene_synonym=hsdH;gene_synonym=JW1611;db_xref=EcoGene:EG10425 EMBL CDS 1697273 1698040 . - 0 ID=.3544;gene=hdhA;locus_tag=b1619;gene_synonym=ECK1614;gene_synonym=hsd;gene_synonym=hsdH;gene_synonym=JW1611;ec_number=1.1.1.159;function=enzyme%3B Central intermediary metabolism: Pool%2C multipurpose conversions;experiment=N-terminus verified by Edman degradation: PMID 2007545%2C9740056;note=NAD-dependent 7alpha-hydroxysteroid dehydrogenase%2C dehydroxylation of bile acids%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=7-alpha-hydroxysteroid dehydrogenase%2C NAD-dependent;protein_id=AAC74691.1;db_xref=GI:1787905;db_xref=ASAP:ABE-0005419;db_xref=UniProtKB/Swiss-Prot:P0AET8;db_xref=EcoGene:EG10425 EMBL gene 1698152 1699180 . - . ID=.3545;gene=malI;locus_tag=b1620;gene_synonym=ECK1615;gene_synonym=JW1612;db_xref=EcoGene:EG10557 EMBL CDS 1698152 1699180 . - 0 ID=.3546;gene=malI;locus_tag=b1620;gene_synonym=ECK1615;gene_synonym=JW1612;function=regulator%3B Degradation of small molecules: Carbon compounds;note=maltose regulon regulatory protein%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=transcriptional repressor of Mal regulon;protein_id=AAC74692.1;db_xref=GI:1787906;db_xref=ASAP:ABE-0005421;db_xref=UniProtKB/Swiss-Prot:P18811;db_xref=EcoGene:EG10557 EMBL gene 1699355 1700947 . + . ID=.3547;gene=malX;locus_tag=b1621;gene_synonym=ECK1616;gene_synonym=JW1613;db_xref=EcoGene:EG10563 EMBL CDS 1699355 1700947 . + 0 ID=.3548;gene=malX;locus_tag=b1621;gene_synonym=ECK1616;gene_synonym=JW1613;ec_number=2.7.1.69;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=PTS system%2C maltose and glucose-specific IIABC component%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=maltose and glucose-specific PTS enzyme IIB component and IIC component;protein_id=AAC74693.1;db_xref=GI:1787908;db_xref=ASAP:ABE-0005429;db_xref=UniProtKB/Swiss-Prot:P19642;db_xref=EcoGene:EG10563 EMBL gene 1700957 1702129 . + . ID=.3549;gene=malY;locus_tag=b1622;gene_synonym=ECK1617;gene_synonym=JW1614;db_xref=EcoGene:EG10564 EMBL CDS 1700957 1702129 . + 0 ID=.3550;gene=malY;locus_tag=b1622;gene_synonym=ECK1617;gene_synonym=JW1614;ec_number=4.4.1.8;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=cystathionine beta-lyase%3B maltose regulon modulator%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=PLP-dependent beta-cystathionase and maltose regulon regulator;protein_id=AAC74694.1;db_xref=GI:1787909;db_xref=ASAP:ABE-0005432;db_xref=UniProtKB/Swiss-Prot:P23256;db_xref=EcoGene:EG10564 EMBL gene 1702233 1703234 . + . ID=.3551;gene=add;locus_tag=b1623;gene_synonym=ECK1618;gene_synonym=JW1615;db_xref=EcoGene:EG10030 EMBL CDS 1702233 1703234 . + 0 ID=.3552;gene=add;locus_tag=b1623;gene_synonym=ECK1618;gene_synonym=JW1615;ec_number=3.5.4.4;function=enzyme%3B Salvage of nucleosides and nucleotides;note=GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion;codon_start=1;transl_table=11;product=adenosine deaminase;protein_id=AAC74695.1;db_xref=GI:1787910;db_xref=ASAP:ABE-0005435;db_xref=UniProtKB/Swiss-Prot:P22333;db_xref=EcoGene:EG10030 EMBL gene 1703268 1704308 . - . ID=.3553;gene=ydgJ;locus_tag=b1624;gene_synonym=ECK1619;gene_synonym=JW5265;db_xref=EcoGene:EG13931 EMBL CDS 1703268 1704308 . - 0 ID=.3554;gene=ydgJ;locus_tag=b1624;gene_synonym=ECK1619;gene_synonym=JW5265;codon_start=1;transl_table=11;product=putative oxidoreductase;protein_id=AAC74696.2;db_xref=GI:87081947;db_xref=ASAP:ABE-0005437;db_xref=UniProtKB/Swiss-Prot:P77376;db_xref=EcoGene:EG13931 EMBL gene 1704551 1704676 . + . ID=.3555;gene=blr;locus_tag=b4409;gene_synonym=ECK1620;gene_synonym=JW5963;db_xref=EcoGene:EG14389 EMBL CDS 1704551 1704676 . + 0 ID=.3556;gene=blr;locus_tag=b4409;gene_synonym=ECK1620;gene_synonym=JW5963;note=beta-lactam resistance protein;codon_start=1;transl_table=11;product=beta-lactam resistance membrane protein%3B divisome-associated protein;protein_id=AAT48132.1;db_xref=GI:48994886;db_xref=ASAP:ABE-0047212;db_xref=UniProtKB/Swiss-Prot:P56976;db_xref=EcoGene:EG14389 EMBL gene 1704949 1705164 . + . ID=.3557;gene=cnu;locus_tag=b1625;gene_synonym=ECK1621;gene_synonym=JW1617;gene_synonym=ydgT;db_xref=EcoGene:EG14303 EMBL CDS 1704949 1705164 . + 0 ID=.3558;gene=cnu;locus_tag=b1625;gene_synonym=ECK1621;gene_synonym=JW1617;gene_synonym=ydgT;codon_start=1;transl_table=11;product=nucleoid-associated oriC-binding protein%3B H-NS and StpA stabilizing factor;protein_id=AAC74697.1;db_xref=GI:1787912;db_xref=ASAP:ABE-0005443;db_xref=UniProtKB/Swiss-Prot:P64467;db_xref=EcoGene:EG14303 EMBL gene 1705250 1705690 . + . ID=.3559;gene=ydgK;locus_tag=b1626;gene_synonym=ECK1622;gene_synonym=JW1618;gene_synonym=rsxP;db_xref=EcoGene:EG13932 EMBL CDS 1705250 1705690 . + 0 ID=.3560;gene=ydgK;locus_tag=b1626;gene_synonym=ECK1622;gene_synonym=JW1618;gene_synonym=rsxP;codon_start=1;transl_table=11;product=DUF2569 family inner membrane protein;protein_id=AAC74698.2;db_xref=GI:87081948;db_xref=ASAP:ABE-0005447;db_xref=UniProtKB/Swiss-Prot:P76180;db_xref=EcoGene:EG13932 EMBL gene 1705767 1706348 . + . ID=.3561;gene=rsxA;locus_tag=b1627;gene_synonym=ECK1623;gene_synonym=JW1619;gene_synonym=rnfA;gene_synonym=ydgL;db_xref=EcoGene:EG13933 EMBL CDS 1705767 1706348 . + 0 ID=.3562;gene=rsxA;locus_tag=b1627;gene_synonym=ECK1623;gene_synonym=JW1619;gene_synonym=rnfA;gene_synonym=ydgL;note=GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=SoxR iron-sulfur cluster reduction factor component%3B inner membrane protein of electron transport complex;protein_id=AAC74699.1;db_xref=GI:1787914;db_xref=ASAP:ABE-0005450;db_xref=UniProtKB/Swiss-Prot:P0A766;db_xref=EcoGene:EG13933 EMBL gene 1706348 1706926 . + . ID=.3563;gene=rsxB;locus_tag=b1628;gene_synonym=ECK1624;gene_synonym=JW1620;gene_synonym=rnfB;gene_synonym=ydgM;db_xref=EcoGene:EG13934 EMBL CDS 1706348 1706926 . + 0 ID=.3564;gene=rsxB;locus_tag=b1628;gene_synonym=ECK1624;gene_synonym=JW1620;gene_synonym=rnfB;gene_synonym=ydgM;note=GO_function: GO:0009055 - electron carrier activity;codon_start=1;transl_table=11;product=SoxR iron-sulfur cluster reduction factor component%3B putative iron-sulfur protein;protein_id=AAC74700.1;db_xref=GI:1787915;db_xref=ASAP:ABE-0005452;db_xref=UniProtKB/Swiss-Prot:P77223;db_xref=EcoGene:EG13934 EMBL gene 1706919 1709141 . + . ID=.3565;gene=rsxC;locus_tag=b1629;gene_synonym=ECK1625;gene_synonym=JW1621;gene_synonym=rnfC;gene_synonym=ydgN;db_xref=EcoGene:EG13935 EMBL CDS 1706919 1709141 . + 0 ID=.3566;gene=rsxC;locus_tag=b1629;gene_synonym=ECK1625;gene_synonym=JW1621;gene_synonym=rnfC;gene_synonym=ydgN;function=putative membrane%3B Not classified;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=SoxR iron-sulfur cluster reduction factor component%3B putative membrane-associated NADH oxidoreductase of electron transport complex;protein_id=AAC74701.1;db_xref=GI:1787916;db_xref=ASAP:ABE-0005454;db_xref=UniProtKB/Swiss-Prot:P77611;db_xref=EcoGene:EG13935 EMBL gene 1709142 1710200 . + . ID=.3567;gene=rsxD;locus_tag=b1630;gene_synonym=ECK1626;gene_synonym=JW1622;gene_synonym=rnfD;gene_synonym=ydgO;db_xref=EcoGene:EG13936 EMBL CDS 1709142 1710200 . + 0 ID=.3568;gene=rsxD;locus_tag=b1630;gene_synonym=ECK1626;gene_synonym=JW1622;gene_synonym=rnfD;gene_synonym=ydgO;note=electron transport complex protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=SoxR iron-sulfur cluster reduction factor component%3B putative membrane protein of electron transport complex;protein_id=AAC74702.1;db_xref=GI:1787917;db_xref=ASAP:ABE-0005457;db_xref=UniProtKB/Swiss-Prot:P76182;db_xref=EcoGene:EG13936 EMBL gene 1710204 1710824 . + . ID=.3569;gene=rsxG;locus_tag=b1631;gene_synonym=ECK1627;gene_synonym=JW1623;gene_synonym=rnfG;gene_synonym=ydgP;db_xref=EcoGene:EG13937 EMBL CDS 1710204 1710824 . + 0 ID=.3570;gene=rsxG;locus_tag=b1631;gene_synonym=ECK1627;gene_synonym=JW1623;gene_synonym=rnfG;gene_synonym=ydgP;codon_start=1;transl_table=11;product=SoxR iron-sulfur cluster reduction factor component%3B putative membrane protein of electron transport complex;protein_id=AAC74703.1;db_xref=GI:1787918;db_xref=ASAP:ABE-0005459;db_xref=UniProtKB/Swiss-Prot:P77285;db_xref=EcoGene:EG13937 EMBL gene 1710828 1711523 . + . ID=.3571;gene=rsxE;locus_tag=b1632;gene_synonym=ECK1628;gene_synonym=JW1624;gene_synonym=rnfE;gene_synonym=ydgQ;db_xref=EcoGene:EG13938 EMBL CDS 1710828 1711523 . + 0 ID=.3572;gene=rsxE;locus_tag=b1632;gene_synonym=ECK1628;gene_synonym=JW1624;gene_synonym=rnfE;gene_synonym=ydgQ;note=electron transport complex protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=SoxR iron-sulfur cluster reduction factor component%3B electron transport inner membrane NADH-quinone reductase;protein_id=AAC74704.1;db_xref=GI:1787919;db_xref=ASAP:ABE-0005461;db_xref=UniProtKB/Swiss-Prot:P77179;db_xref=EcoGene:EG13938 EMBL gene 1711523 1712158 . + . ID=.3573;gene=nth;locus_tag=b1633;gene_synonym=ECK1629;gene_synonym=JW1625;db_xref=EcoGene:EG10662 EMBL CDS 1711523 1712158 . + 0 ID=.3574;gene=nth;locus_tag=b1633;gene_synonym=ECK1629;gene_synonym=JW1625;ec_number=4.2.99.18;function=enzyme%3B Degradation of DNA;experiment=N-terminus verified by Edman degradation: PMID 2669955;note=endonuclease III%3B specific for apurinic and/or apyrimidinic sites%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006308 - DNA catabolic process%3B GO_process: GO:0009314 - response to radiation;codon_start=1;transl_table=11;product=DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III);protein_id=AAC74705.1;db_xref=GI:1787920;db_xref=ASAP:ABE-0005463;db_xref=UniProtKB/Swiss-Prot:P0AB83;db_xref=EcoGene:EG10662 EMBL gene 1712769 1714271 . + . ID=.3575;gene=dtpA;locus_tag=b1634;gene_synonym=ECK1630;gene_synonym=JW1626;gene_synonym=tppB;gene_synonym=ydgR;db_xref=EcoGene:EG13939 EMBL CDS 1712769 1714271 . + 0 ID=.3576;gene=dtpA;locus_tag=b1634;gene_synonym=ECK1630;gene_synonym=JW1626;gene_synonym=tppB;gene_synonym=ydgR;function=transport%3B Not classified;note=putative transport protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=dipeptide and tripeptide permease A;protein_id=AAC74706.1;db_xref=GI:1787922;db_xref=ASAP:ABE-0005469;db_xref=UniProtKB/Swiss-Prot:P77304;db_xref=EcoGene:EG13939 EMBL gene 1714377 1714982 . + . ID=.3577;gene=gstA;locus_tag=b1635;gene_synonym=ECK1631;gene_synonym=gst;gene_synonym=JW1627;db_xref=EcoGene:EG12613 EMBL CDS 1714377 1714982 . + 0 ID=.3578;gene=gstA;locus_tag=b1635;gene_synonym=ECK1631;gene_synonym=gst;gene_synonym=JW1627;ec_number=2.5.1.18;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Thioredoxin%2C glutaredoxin%2C glutathione;experiment=N-terminus verified by Edman degradation: PMID 2185038%2C7798255;codon_start=1;transl_table=11;product=glutathionine S-transferase;protein_id=AAC74707.1;db_xref=GI:1787923;db_xref=ASAP:ABE-0005473;db_xref=UniProtKB/Swiss-Prot:P0A9D2;db_xref=EcoGene:EG12613 EMBL gene 1715026 1715889 . - . ID=.3579;gene=pdxY;locus_tag=b1636;gene_synonym=ECK1632;gene_synonym=JW1628;gene_synonym=ydgS;db_xref=EcoGene:EG13940 EMBL CDS 1715026 1715889 . - 0 ID=.3580;gene=pdxY;locus_tag=b1636;gene_synonym=ECK1632;gene_synonym=JW1628;gene_synonym=ydgS;ec_number=2.7.1.35;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Pyridoxine;note=pyridoxal kinase 2 / pyridoxine kinase;codon_start=1;transl_table=11;product=pyridoxamine kinase;protein_id=AAC74708.1;db_xref=GI:1787924;db_xref=ASAP:ABE-0005475;db_xref=UniProtKB/Swiss-Prot:P77150;db_xref=EcoGene:EG13940 EMBL gene 1715948 1717222 . - . ID=.3581;gene=tyrS;locus_tag=b1637;gene_synonym=ECK1633;gene_synonym=JW1629;db_xref=EcoGene:EG11043 EMBL CDS 1715948 1717222 . - 0 ID=.3582;gene=tyrS;locus_tag=b1637;gene_synonym=ECK1633;gene_synonym=JW1629;ec_number=6.1.1.1;function=enzyme%3B Aminoacyl tRNA synthetases%2C tRNA modification;note=tyrosine tRNA synthetase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006418 - tRNA aminoacylation for protein translation;codon_start=1;transl_table=11;product=tyrosyl-tRNA synthetase;protein_id=AAC74709.1;db_xref=GI:1787925;db_xref=ASAP:ABE-0005477;db_xref=UniProtKB/Swiss-Prot:P0AGJ9;db_xref=EcoGene:EG11043 EMBL gene 1717351 1718007 . - . ID=.3583;gene=pdxH;locus_tag=b1638;gene_synonym=ECK1634;gene_synonym=JW1630;db_xref=EcoGene:EG11487 EMBL CDS 1717351 1718007 . - 0 ID=.3584;gene=pdxH;locus_tag=b1638;gene_synonym=ECK1634;gene_synonym=JW1630;ec_number=1.4.3.5;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Pyridoxine;note=pyridoxinephosphate oxidase%3B GO_process: GO:0008615 - pyridoxine biosynthetic process;codon_start=1;transl_table=11;product=pyridoxine 5'-phosphate oxidase;protein_id=AAC74710.1;db_xref=GI:1787926;db_xref=ASAP:ABE-0005482;db_xref=UniProtKB/Swiss-Prot:P0AFI7;db_xref=EcoGene:EG11487 EMBL gene 1718066 1718395 . - . ID=.3585;gene=mliC;locus_tag=b1639;gene_synonym=ECK1635;gene_synonym=JW1631;gene_synonym=ydhA;db_xref=EcoGene:EG11488 EMBL CDS 1718066 1718395 . - 0 ID=.3586;gene=mliC;locus_tag=b1639;gene_synonym=ECK1635;gene_synonym=JW1631;gene_synonym=ydhA;codon_start=1;transl_table=11;product=inhibitor of c-type lysozyme%2C membrane-bound%3B putative lipoprotein;protein_id=AAC74711.2;db_xref=GI:87081949;db_xref=ASAP:ABE-0005485;db_xref=UniProtKB/Swiss-Prot:P28224;db_xref=EcoGene:EG11488 EMBL gene 1718493 1719602 . - . ID=.3587;gene=anmK;locus_tag=b1640;gene_synonym=ECK1636;gene_synonym=JW1632;gene_synonym=ydhH;db_xref=EcoGene:EG13942 EMBL CDS 1718493 1719602 . - 0 ID=.3588;gene=anmK;locus_tag=b1640;gene_synonym=ECK1636;gene_synonym=JW1632;gene_synonym=ydhH;function=enzyme%3B Murein recycling;codon_start=1;transl_table=11;product=anhydro-N-acetylmuramic acid kinase;protein_id=AAC74712.1;db_xref=GI:1787928;db_xref=ASAP:ABE-0005488;db_xref=UniProtKB/Swiss-Prot:P77570;db_xref=EcoGene:EG13942 EMBL gene 1719876 1720343 . + . ID=.3589;gene=slyB;locus_tag=b1641;gene_synonym=ECK1637;gene_synonym=JW1633;db_xref=EcoGene:EG13409 EMBL CDS 1719876 1720343 . + 0 ID=.3590;gene=slyB;locus_tag=b1641;gene_synonym=ECK1637;gene_synonym=JW1633;function=putative membrane%3B Not classified;note=putative outer membrane protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=outer membrane lipoprotein;protein_id=AAT48133.1;db_xref=GI:48994887;db_xref=ASAP:ABE-0005493;db_xref=UniProtKB/Swiss-Prot:P0A905;db_xref=EcoGene:EG13409 EMBL gene 1720390 1720824 . - . ID=.3591;gene=slyA;locus_tag=b1642;gene_synonym=ECK1638;gene_synonym=JW5267;db_xref=EcoGene:EG13408 EMBL CDS 1720390 1720824 . - 0 ID=.3592;gene=slyA;locus_tag=b1642;gene_synonym=ECK1638;gene_synonym=JW5267;function=regulator%3B Adaptations%2C atypical conditions;note=transcriptional regulator for cryptic hemolysin%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=global transcriptional regulator;protein_id=AAC74714.2;db_xref=GI:87081950;db_xref=ASAP:ABE-0005495;db_xref=UniProtKB/Swiss-Prot:P0A8W2;db_xref=EcoGene:EG13408 EMBL gene 1721025 1721261 . + . ID=.3593;gene=ydhI;locus_tag=b1643;gene_synonym=ECK1639;gene_synonym=JW1635;db_xref=EcoGene:EG13943 EMBL CDS 1721025 1721261 . + 0 ID=.3594;gene=ydhI;locus_tag=b1643;gene_synonym=ECK1639;gene_synonym=JW1635;codon_start=1;transl_table=11;product=DUF1656 family putative inner membrane efflux pump associated protein;protein_id=AAC74715.1;db_xref=GI:1787931;db_xref=ASAP:ABE-0005499;db_xref=UniProtKB/Swiss-Prot:P64471;db_xref=EcoGene:EG13943 EMBL gene 1721264 1722121 . + . ID=.3595;gene=ydhJ;locus_tag=b1644;gene_synonym=ECK1640;gene_synonym=JW1636;db_xref=EcoGene:EG13944 EMBL CDS 1721264 1722121 . + 0 ID=.3596;gene=ydhJ;locus_tag=b1644;gene_synonym=ECK1640;gene_synonym=JW1636;function=putative membrane%3B Not classified;note=putative membrane protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative membrane fusion protein (MFP) of YdhJK efflux pump;protein_id=AAC74716.2;db_xref=GI:87081951;db_xref=ASAP:ABE-0005501;db_xref=UniProtKB/Swiss-Prot:P76185;db_xref=EcoGene:EG13944 EMBL gene 1722121 1724133 . + . ID=.3597;gene=ydhK;locus_tag=b1645;gene_synonym=ECK1641;gene_synonym=JW1637;db_xref=EcoGene:EG13945 EMBL CDS 1722121 1724133 . + 0 ID=.3598;gene=ydhK;locus_tag=b1645;gene_synonym=ECK1641;gene_synonym=JW1637;codon_start=1;transl_table=11;product=putative efflux protein (PET) component of YdhJK efflux pump;protein_id=AAC74717.1;db_xref=GI:1787933;db_xref=ASAP:ABE-0005503;db_xref=UniProtKB/Swiss-Prot:P76186;db_xref=EcoGene:EG13945 EMBL gene 1724134 1724655 . - . ID=.3599;gene=sodC;locus_tag=b1646;gene_synonym=ECK1642;gene_synonym=JW1638;db_xref=EcoGene:EG13419 EMBL CDS 1724134 1724655 . - 0 ID=.3600;gene=sodC;locus_tag=b1646;gene_synonym=ECK1642;gene_synonym=JW1638;ec_number=1.15.1.1;function=enzyme%3B Detoxification;note=superoxide dismutase precursor (Cu-Zn)%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0006805 - xenobiotic metabolic process;codon_start=1;transl_table=11;product=superoxide dismutase%2C Cu%2C Zn%2C periplasmic;protein_id=AAC74718.1;db_xref=GI:1787934;db_xref=ASAP:ABE-0005505;db_xref=UniProtKB/Swiss-Prot:P0AGD1;db_xref=EcoGene:EG13419 EMBL gene 1724736 1725632 . - . ID=.3601;gene=ydhF;locus_tag=b1647;gene_synonym=ECK1643;gene_synonym=JW1639;db_xref=EcoGene:EG13420 EMBL CDS 1724736 1725632 . - 0 ID=.3602;gene=ydhF;locus_tag=b1647;gene_synonym=ECK1643;gene_synonym=JW1639;codon_start=1;transl_table=11;product=putative oxidoreductase;protein_id=AAT48134.1;db_xref=GI:48994888;db_xref=ASAP:ABE-0005508;db_xref=UniProtKB/Swiss-Prot:P76187;db_xref=EcoGene:EG13420 EMBL gene 1725681 1725920 . - . ID=.3603;gene=ydhL;locus_tag=b1648;gene_synonym=ECK1644;gene_synonym=JW5827;db_xref=EcoGene:EG13946 EMBL CDS 1725681 1725920 . - 0 ID=.3604;gene=ydhL;locus_tag=b1648;gene_synonym=ECK1644;gene_synonym=JW5827;codon_start=1;transl_table=11;product=DUF1289 family protein;protein_id=AAC74720.2;db_xref=GI:87081952;db_xref=ASAP:ABE-0005510;db_xref=UniProtKB/Swiss-Prot:P64474;db_xref=EcoGene:EG13946 EMBL gene 1726023 1726622 . + . ID=.3605;gene=nemR;locus_tag=b1649;gene_synonym=ECK1645;gene_synonym=JW5874;gene_synonym=ydhM;db_xref=EcoGene:EG13947 EMBL CDS 1726023 1726622 . + 0 ID=.3606;gene=nemR;locus_tag=b1649;gene_synonym=ECK1645;gene_synonym=JW5874;gene_synonym=ydhM;note=GO_process: GO:0006355 - regulation of transcription%2C DNA-dependent;codon_start=1;transl_table=11;product=transcriptional repressor for the nemRA-gloA operon%2C quinone-%2C glyoxal-%2C and HOCl-activated;protein_id=AAC74721.3;db_xref=GI:145693141;db_xref=ASAP:ABE-0005514;db_xref=UniProtKB/Swiss-Prot:P67430;db_xref=EcoGene:EG13947 EMBL gene 1726659 1727756 . + . ID=.3607;gene=nemA;locus_tag=b1650;gene_synonym=ECK1646;gene_synonym=JW1642;gene_synonym=ydhN;db_xref=EcoGene:EG13546 EMBL CDS 1726659 1727756 . + 0 ID=.3608;gene=nemA;locus_tag=b1650;gene_synonym=ECK1646;gene_synonym=JW1642;gene_synonym=ydhN;ec_number=1.-.-.-;function=enzyme%3B Central intermediary metabolism: Pool%2C multipurpose conversions;note=N-ethylmaleimide reductase%3B GO_process: GO:0006805 - xenobiotic metabolic process;codon_start=1;transl_table=11;product=chromate reductase%2C quinone reductase%2C FMN-linked%3B N-Ethylmaleimide reductase%3B old yellow enzyme;protein_id=AAC74722.1;db_xref=GI:1787939;db_xref=ASAP:ABE-0005516;db_xref=UniProtKB/Swiss-Prot:P77258;db_xref=EcoGene:EG13546 EMBL gene 1727837 1728244 . + . ID=.3609;gene=gloA;locus_tag=b1651;gene_synonym=ECK1647;gene_synonym=JW1643;db_xref=EcoGene:EG13421 EMBL CDS 1727837 1728244 . + 0 ID=.3610;gene=gloA;locus_tag=b1651;gene_synonym=ECK1647;gene_synonym=JW1643;ec_number=4.4.1.5;function=enzyme%3B Central intermediary metabolism: Pool%2C multipurpose conversions;experiment=N-terminus verified by Edman degradation: PMID 9628737;note=lactoylglutathione lyase%3B GO_process: GO:0009438 - methylglyoxal metabolic process;codon_start=1;transl_table=11;product=glyoxalase I%2C Ni-dependent;protein_id=AAC74723.1;db_xref=GI:1787940;db_xref=ASAP:ABE-0005520;db_xref=UniProtKB/Swiss-Prot:P0AC81;db_xref=EcoGene:EG13421 EMBL gene 1728347 1728994 . + . ID=.3611;gene=rnt;locus_tag=b1652;gene_synonym=ECK1648;gene_synonym=JW1644;db_xref=EcoGene:EG11547 EMBL CDS 1728347 1728994 . + 0 ID=.3612;gene=rnt;locus_tag=b1652;gene_synonym=ECK1648;gene_synonym=JW1644;ec_number=3.1.13.-;function=enzyme%3B Degradation of RNA;note=RNase T%2C degrades tRNA%3B GO_process: GO:0006401 - RNA catabolic process%3B GO_process: GO:0006308 - DNA catabolic process;codon_start=1;transl_table=11;product=RNase T%3B exoribonuclease T%3B structured DNA 3' exonuclease%3B RNA processing%3B DNA repair;protein_id=AAC74724.1;db_xref=GI:1787941;db_xref=ASAP:ABE-0005523;db_xref=UniProtKB/Swiss-Prot:P30014;db_xref=EcoGene:EG11547 EMBL gene 1729087 1733703 . + . ID=.3613;gene=lhr;locus_tag=b1653;gene_synonym=ECK1649;gene_synonym=JW1645;gene_synonym=rhlF;db_xref=EcoGene:EG11548 EMBL CDS 1729087 1733703 . + 0 ID=.3614;gene=lhr;locus_tag=b1653;gene_synonym=ECK1649;gene_synonym=JW1645;gene_synonym=rhlF;function=enzyme%3B DNA - replication%2C repair%2C restriction/modification;note=member of ATP-dependent helicase superfamily II%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006261 - DNA-dependent DNA replication;codon_start=1;transl_table=11;product=putative ATP-dependent helicase;protein_id=AAC74725.1;db_xref=GI:1787942;db_xref=ASAP:ABE-0005525;db_xref=UniProtKB/Swiss-Prot:P30015;db_xref=EcoGene:EG11548 EMBL repeat_region 1733714 1733737 . + . ID=.3615;note=REP127 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 1733754 1734101 . - . ID=.3616;gene=grxD;locus_tag=b1654;gene_synonym=ECK1650;gene_synonym=JW1646;gene_synonym=ydhD;db_xref=EcoGene:EG12181 EMBL CDS 1733754 1734101 . - 0 ID=.3617;gene=grxD;locus_tag=b1654;gene_synonym=ECK1650;gene_synonym=JW1646;gene_synonym=ydhD;codon_start=1;transl_table=11;product=glutaredoxin-4;protein_id=AAC74726.1;db_xref=GI:1787943;db_xref=ASAP:ABE-0005527;db_xref=UniProtKB/Swiss-Prot:P0AC69;db_xref=EcoGene:EG12181 EMBL gene 1734435 1735250 . + . ID=.3618;gene=mepH;locus_tag=b1655;gene_synonym=ECK1651;gene_synonym=JW5270;gene_synonym=ydhO;db_xref=EcoGene:EG13949 EMBL CDS 1734435 1735250 . + 0 ID=.3619;gene=mepH;locus_tag=b1655;gene_synonym=ECK1651;gene_synonym=JW5270;gene_synonym=ydhO;function=enzyme%3B Murein sacculus%2C peptidoglycan;note=putative lipoprotein;codon_start=1;transl_table=11;product=murein DD-endopeptidase%2C space-maker hydrolase;protein_id=AAC74727.1;db_xref=GI:1787944;db_xref=ASAP:ABE-0005533;db_xref=UniProtKB/Swiss-Prot:P76190;db_xref=EcoGene:EG13949 EMBL gene 1735378 1735959 . + . ID=.3620;gene=sodB;locus_tag=b1656;gene_synonym=ECK1652;gene_synonym=JW1648;db_xref=EcoGene:EG10954 EMBL CDS 1735378 1735959 . + 0 ID=.3621;gene=sodB;locus_tag=b1656;gene_synonym=ECK1652;gene_synonym=JW1648;ec_number=1.15.1.1;function=enzyme%3B Detoxification;note=superoxide dismutase%2C iron%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006805 - xenobiotic metabolic process;codon_start=1;transl_table=11;product=superoxide dismutase%2C Fe;protein_id=AAC74728.1;db_xref=GI:1787946;db_xref=ASAP:ABE-0005537;db_xref=UniProtKB/Swiss-Prot:P0AGD3;db_xref=EcoGene:EG10954 EMBL repeat_region 1735983 1736056 . + . ID=.3622;note=REP128 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 1736121 1737290 . - . ID=.3623;gene=ydhP;locus_tag=b1657;gene_synonym=ECK1653;gene_synonym=JW1649;db_xref=EcoGene:EG13950 EMBL CDS 1736121 1737290 . - 0 ID=.3624;gene=ydhP;locus_tag=b1657;gene_synonym=ECK1653;gene_synonym=JW1649;function=putative transport%3B Not classified;note=putative transport protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative MFS transporter%2C inner membrane protein;protein_id=AAC74729.1;db_xref=GI:1787947;db_xref=ASAP:ABE-0005540;db_xref=UniProtKB/Swiss-Prot:P77389;db_xref=EcoGene:EG13950 EMBL gene 1737456 1737545 . - . ID=.3625;gene=ynhF;locus_tag=b4602;gene_synonym=ECK4411;db_xref=EcoGene:EG14016 EMBL CDS 1737456 1737545 . - 0 ID=.3626;gene=ynhF;locus_tag=b4602;gene_synonym=ECK4411;codon_start=1;transl_table=11;product=stress response membrane;protein_id=ABP93447.1;db_xref=GI:145693142;db_xref=UniProtKB/Swiss-Prot:A5A618;db_xref=EcoGene:EG14016 EMBL gene 1737844 1738869 . + . ID=.3627;gene=purR;locus_tag=b1658;gene_synonym=ECK1654;gene_synonym=JW1650;db_xref=EcoGene:EG10800 EMBL CDS 1737844 1738869 . + 0 ID=.3628;gene=purR;locus_tag=b1658;gene_synonym=ECK1654;gene_synonym=JW1650;function=regulator%3B Purine ribonucleotide biosynthesis;note=transcriptional repressor for pur regulon%2C glyA%2C glnB%2C prsA%2C speA%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006164 - purine nucleotide biosynthetic process%3B GO_process: GO:0006596 - polyamine biosynthetic process%3B GO_process: GO:0000105 - histidine biosynthetic process%3B GO_process: GO:0009063 - cellular amino acid catabolic process%3B GO_process: GO:0006545 - glycine biosynthetic process%3B GO_process: GO:0006807 - nitrogen compound metabolic process%3B GO_process: GO:0006221 - pyrimidine nucleotide biosynthetic process%3B GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=transcriptional repressor%2C hypoxanthine-binding;protein_id=AAC74730.1;db_xref=GI:1787948;db_xref=ASAP:ABE-0005545;db_xref=UniProtKB/Swiss-Prot:P0ACP7;db_xref=EcoGene:EG10800 EMBL gene 1738866 1739798 . - . ID=.3629;gene=ydhB;locus_tag=b1659;gene_synonym=ECK1655;gene_synonym=JW1651;db_xref=EcoGene:EG12140 EMBL CDS 1738866 1739798 . - 0 ID=.3630;gene=ydhB;locus_tag=b1659;gene_synonym=ECK1655;gene_synonym=JW1651;function=putative regulator%3B Not classified;note=putative transcriptional regulator LYSR-type%3B GO_function: GO:0016563 - transcription activator activity%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=LysR family putative transcriptional regulator;protein_id=AAC74731.1;db_xref=GI:1787949;db_xref=ASAP:ABE-0005547;db_xref=UniProtKB/Swiss-Prot:P0ACR2;db_xref=EcoGene:EG12140 EMBL gene 1739911 1741122 . + . ID=.3631;gene=ydhC;locus_tag=b1660;gene_synonym=ECK1656;gene_synonym=JW1652;db_xref=EcoGene:EG12141 EMBL CDS 1739911 1741122 . + 0 ID=.3632;gene=ydhC;locus_tag=b1660;gene_synonym=ECK1656;gene_synonym=JW1652;function=putative transport%3B Not classified;note=putative transport protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative arabinose efflux transporter;protein_id=AAT48135.1;db_xref=GI:48994889;db_xref=ASAP:ABE-0005551;db_xref=UniProtKB/Swiss-Prot:P37597;db_xref=EcoGene:EG12141 EMBL gene 1741413 1742561 . + . ID=.3633;gene=cfa;locus_tag=b1661;gene_synonym=cdfA;gene_synonym=ECK1657;gene_synonym=JW1653;db_xref=EcoGene:EG11531 EMBL CDS 1741413 1742561 . + 0 ID=.3634;gene=cfa;locus_tag=b1661;gene_synonym=cdfA;gene_synonym=ECK1657;gene_synonym=JW1653;ec_number=2.1.1.79;function=enzyme%3B Fatty acid and phosphatidic acid biosynthesis;note=cyclopropane fatty acyl phospholipid synthase;codon_start=1;transl_table=11;product=cyclopropane fatty acyl phospholipid synthase%2C SAM-dependent;protein_id=AAC74733.1;db_xref=GI:1787951;db_xref=ASAP:ABE-0005555;db_xref=UniProtKB/Swiss-Prot:P0A9H7;db_xref=EcoGene:EG11531 EMBL gene 1742601 1743242 . - . ID=.3635;gene=ribC;locus_tag=b1662;gene_synonym=ECK1658;gene_synonym=JW1654;gene_synonym=ribE;db_xref=EcoGene:EG11406 EMBL CDS 1742601 1743242 . - 0 ID=.3636;gene=ribC;locus_tag=b1662;gene_synonym=ECK1658;gene_synonym=JW1654;gene_synonym=ribE;ec_number=2.5.1.9;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Riboflavin;note=riboflavin synthase%2C alpha chain;codon_start=1;transl_table=11;product=riboflavin synthase%2C alpha subunit;protein_id=AAC74734.1;db_xref=GI:1787952;db_xref=ASAP:ABE-0005557;db_xref=UniProtKB/Swiss-Prot:P0AFU8;db_xref=EcoGene:EG11406 EMBL gene 1743457 1744830 . + . ID=.3637;gene=mdtK;locus_tag=b1663;gene_synonym=ECK1659;gene_synonym=JW1655;gene_synonym=norE;gene_synonym=norM;gene_synonym=ydhE;db_xref=EcoGene:EG12400 EMBL CDS 1743457 1744830 . + 0 ID=.3638;gene=mdtK;locus_tag=b1663;gene_synonym=ECK1659;gene_synonym=JW1655;gene_synonym=norE;gene_synonym=norM;gene_synonym=ydhE;function=putative transport%3B Not classified;note=multidrug resistance protein norM (Na(+)/drug antiporter) (Multidrug-efflux transporter)%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=multidrug efflux system transporter;protein_id=AAT48136.1;db_xref=GI:48994890;db_xref=ASAP:ABE-0005561;db_xref=UniProtKB/Swiss-Prot:P37340;db_xref=EcoGene:EG12400 EMBL gene 1744871 1746127 . - . ID=.3639;gene=ydhQ;locus_tag=b1664;gene_synonym=ECK1660;gene_synonym=JW1656;db_xref=EcoGene:EG13951 EMBL CDS 1744871 1746127 . - 0 ID=.3640;gene=ydhQ;locus_tag=b1664;gene_synonym=ECK1660;gene_synonym=JW1656;function=putative enzyme%3B Not classified;note=possible enzyme;codon_start=1;transl_table=11;product=autotransporter adhesin-related protein;protein_id=AAC74736.1;db_xref=GI:1787954;db_xref=ASAP:ABE-0005563;db_xref=UniProtKB/Swiss-Prot:P77552;db_xref=EcoGene:EG13951 EMBL gene 1746435 1746511 . + . ID=.3641;gene=valV;locus_tag=b1665;gene_synonym=ECK1661;gene_synonym=JWR0031;db_xref=EcoGene:EG30111 EMBL tRNA 1746435 1746511 . + . ID=.3642;gene=valV;locus_tag=b1665;gene_synonym=ECK1661;gene_synonym=JWR0031;product=tRNA-Val;note=anticodon: GAC;db_xref=ASAP:ABE-0005567;db_xref=EcoGene:EG30111 EMBL gene 1746516 1746592 . + . ID=.3643;gene=valW;locus_tag=b1666;gene_synonym=ECK1662;gene_synonym=JWR0032;db_xref=EcoGene:EG30112 EMBL tRNA 1746516 1746592 . + . ID=.3644;gene=valW;locus_tag=b1666;gene_synonym=ECK1662;gene_synonym=JWR0032;product=tRNA-Val;note=anticodon: GAC;db_xref=ASAP:ABE-0005569;db_xref=EcoGene:EG30112 EMBL gene 1746700 1747005 . + . ID=.3645;gene=ydhR;locus_tag=b1667;gene_synonym=ECK1663;gene_synonym=JW1657;db_xref=EcoGene:EG13952 EMBL CDS 1746700 1747005 . + 0 ID=.3646;gene=ydhR;locus_tag=b1667;gene_synonym=ECK1663;gene_synonym=JW1657;codon_start=1;transl_table=11;product=putative monooxygenase;protein_id=AAC74737.1;db_xref=GI:1787956;db_xref=ASAP:ABE-0005572;db_xref=UniProtKB/Swiss-Prot:P0ACX3;db_xref=EcoGene:EG13952 EMBL gene 1747131 1748735 . + . ID=.3647;gene=ydhS;locus_tag=b1668;gene_synonym=ECK1664;gene_synonym=JW1658;db_xref=EcoGene:EG13953 EMBL CDS 1747131 1748735 . + 0 ID=.3648;gene=ydhS;locus_tag=b1668;gene_synonym=ECK1664;gene_synonym=JW1658;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=putative oxidoreductase;protein_id=AAC74738.1;db_xref=GI:1787957;db_xref=ASAP:ABE-0005575;db_xref=UniProtKB/Swiss-Prot:P77148;db_xref=EcoGene:EG13953 EMBL gene 1748747 1749559 . - . ID=.3649;gene=ydhT;locus_tag=b1669;gene_synonym=ECK1665;gene_synonym=JW1659;db_xref=EcoGene:EG13954 EMBL CDS 1748747 1749559 . - 0 ID=.3650;gene=ydhT;locus_tag=b1669;gene_synonym=ECK1665;gene_synonym=JW1659;codon_start=1;transl_table=11;product=FNR%2C Nar%2C NarP-regulated protein%3B putative subunit of YdhYVWXUT oxidoreductase complex;protein_id=AAC74739.1;db_xref=GI:1787958;db_xref=ASAP:ABE-0005577;db_xref=UniProtKB/Swiss-Prot:P77147;db_xref=EcoGene:EG13954 EMBL gene 1749563 1750348 . - . ID=.3651;gene=ydhU;locus_tag=b1670;gene_synonym=ECK1666;gene_synonym=JW1660;db_xref=EcoGene:EG13955 EMBL CDS 1749563 1750348 . - 0 ID=.3652;gene=ydhU;locus_tag=b1670;gene_synonym=ECK1666;gene_synonym=JW1660;function=putative enzyme%3B Not classified;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative cytochrome b subunit of YdhYVWXUT oxidoreductase complex;protein_id=AAC74740.1;db_xref=GI:1787959;db_xref=ASAP:ABE-0005579;db_xref=UniProtKB/Swiss-Prot:P77409;db_xref=EcoGene:EG13955 EMBL gene 1750345 1751013 . - . ID=.3653;gene=ydhX;locus_tag=b1671;gene_synonym=ECK1667;gene_synonym=JW5271;db_xref=EcoGene:EG13958 EMBL CDS 1750345 1751013 . - 0 ID=.3654;gene=ydhX;locus_tag=b1671;gene_synonym=ECK1667;gene_synonym=JW5271;function=putative enzyme%3B Not classified;note=putative oxidoreductase%2C Fe-S subunit;codon_start=1;transl_table=11;product=putative 4Fe-4S ferridoxin-type protein%3B FNR%2C Nar%2C NarP-regulated protein%3B putative subunit of YdhYVWXUT oxidoreductase complex;protein_id=AAC74741.4;db_xref=GI:226510944;db_xref=ASAP:ABE-0005583;db_xref=UniProtKB/Swiss-Prot:P77375;db_xref=EcoGene:EG13958 EMBL gene 1751077 1751724 . - . ID=.3655;gene=ydhW;locus_tag=b1672;gene_synonym=ECK1668;gene_synonym=JW1662;db_xref=EcoGene:EG13957 EMBL CDS 1751077 1751724 . - 0 ID=.3656;gene=ydhW;locus_tag=b1672;gene_synonym=ECK1668;gene_synonym=JW1662;codon_start=1;transl_table=11;product=FNR%2C Nar%2C NarP-regulated protein%3B putative subunit of YdhYVWXUT oxidoreductase complex;protein_id=AAC74742.1;db_xref=GI:1787961;db_xref=ASAP:ABE-0005585;db_xref=UniProtKB/Swiss-Prot:P77564;db_xref=EcoGene:EG13957 EMBL gene 1751728 1753830 . - . ID=.3657;gene=ydhV;locus_tag=b1673;gene_synonym=ECK1669;gene_synonym=JW5272;db_xref=EcoGene:EG13956 EMBL CDS 1751728 1753830 . - 0 ID=.3658;gene=ydhV;locus_tag=b1673;gene_synonym=ECK1669;gene_synonym=JW5272;codon_start=1;transl_table=11;product=putative oxidoreductase subunit;protein_id=AAC74743.1;db_xref=GI:1787962;db_xref=ASAP:ABE-0005587;db_xref=UniProtKB/Swiss-Prot:P76192;db_xref=EcoGene:EG13956 EMBL gene 1753851 1754477 . - . ID=.3659;gene=ydhY;locus_tag=b1674;gene_synonym=ECK1670;gene_synonym=JW1664;db_xref=EcoGene:EG13959 EMBL CDS 1753851 1754477 . - 0 ID=.3660;gene=ydhY;locus_tag=b1674;gene_synonym=ECK1670;gene_synonym=JW1664;function=putative enzyme%3B Not classified;note=putative oxidoreductase%2C Fe-S subunit;codon_start=1;transl_table=11;product=putative 4Fe-4S ferridoxin-type protein%3B FNR%2C Nar%2C NarP-regulated protein%3B putative subunit of YdhYVWXUT oxidoreductase complex;protein_id=AAC74744.1;db_xref=GI:1787963;db_xref=ASAP:ABE-0005589;db_xref=UniProtKB/Swiss-Prot:P0AAL6;db_xref=EcoGene:EG13959 EMBL gene 1754932 1755141 . - . ID=.3661;gene=ydhZ;locus_tag=b1675;gene_synonym=ECK1671;gene_synonym=JW1665;db_xref=EcoGene:EG13960 EMBL CDS 1754932 1755141 . - 0 ID=.3662;gene=ydhZ;locus_tag=b1675;gene_synonym=ECK1671;gene_synonym=JW1665;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC74745.1;db_xref=GI:1787964;db_xref=ASAP:ABE-0005591;db_xref=UniProtKB/Swiss-Prot:P0ACX5;db_xref=EcoGene:EG13960 EMBL gene 1755698 1757110 . + . ID=.3663;gene=pykF;locus_tag=b1676;gene_synonym=ECK1672;gene_synonym=JW1666;db_xref=EcoGene:EG10804 EMBL CDS 1755698 1757110 . + 0 ID=.3664;gene=pykF;locus_tag=b1676;gene_synonym=ECK1672;gene_synonym=JW1666;ec_number=2.7.1.40;function=enzyme%3B Energy metabolism%2C carbon: Glycolysis;experiment=N-terminus verified by Edman degradation: PMID 1859631%2C9298646;note=pyruvate kinase I (formerly F)%2C fructose stimulated%3B GO_process: GO:0006096 - glycolysis%3B GO_process: GO:0006113 - fermentation%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=pyruvate kinase I;protein_id=AAC74746.1;db_xref=GI:1787965;db_xref=ASAP:ABE-0005600;db_xref=UniProtKB/Swiss-Prot:P0AD61;db_xref=EcoGene:EG10804 EMBL gene 1757421 1757657 . + . ID=.3665;gene=lpp;locus_tag=b1677;gene_synonym=ECK1673;gene_synonym=JW1667;gene_synonym=mlpA;gene_synonym=mulI;db_xref=EcoGene:EG10544 EMBL CDS 1757421 1757657 . + 0 ID=.3666;gene=lpp;locus_tag=b1677;gene_synonym=ECK1673;gene_synonym=JW1667;gene_synonym=mlpA;gene_synonym=mulI;function=membrane%3B Murein sacculus%2C peptidoglycan;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009252 - peptidoglycan biosynthetic process;codon_start=1;transl_table=11;product=murein lipoprotein;protein_id=AAC74747.1;db_xref=GI:1787967;db_xref=ASAP:ABE-0005603;db_xref=UniProtKB/Swiss-Prot:P69776;db_xref=EcoGene:EG10544 EMBL gene 1757721 1758725 . - . ID=.3667;gene=ldtE;locus_tag=b1678;gene_synonym=ECK1674;gene_synonym=JW1668;gene_synonym=ynhG;db_xref=EcoGene:EG14015 EMBL CDS 1757721 1758725 . - 0 ID=.3668;gene=ldtE;locus_tag=b1678;gene_synonym=ECK1674;gene_synonym=JW1668;gene_synonym=ynhG;function=enzyme%3B Murein sacculus%2C peptidoglycan;codon_start=1;transl_table=11;product=murein L%2CD-transpeptidase;protein_id=AAC74748.1;db_xref=GI:1787968;db_xref=ASAP:ABE-0005605;db_xref=UniProtKB/Swiss-Prot:P76193;db_xref=EcoGene:EG14015 EMBL gene 1758874 1759290 . - . ID=.3669;gene=sufE;locus_tag=b1679;gene_synonym=ECK1675;gene_synonym=JW1669;gene_synonym=ynhA;db_xref=EcoGene:EG13961 EMBL CDS 1758874 1759290 . - 0 ID=.3670;gene=sufE;locus_tag=b1679;gene_synonym=ECK1675;gene_synonym=JW1669;gene_synonym=ynhA;codon_start=1;transl_table=11;product=sulfur acceptor protein;protein_id=AAC74749.1;db_xref=GI:1787969;db_xref=ASAP:ABE-0005608;db_xref=UniProtKB/Swiss-Prot:P76194;db_xref=EcoGene:EG13961 EMBL gene 1759303 1760523 . - . ID=.3671;gene=sufS;locus_tag=b1680;gene_synonym=csdB;gene_synonym=ECK1676;gene_synonym=JW1670;gene_synonym=ynhB;db_xref=EcoGene:EG13962 EMBL CDS 1759303 1760523 . - 0 ID=.3672;gene=sufS;locus_tag=b1680;gene_synonym=csdB;gene_synonym=ECK1676;gene_synonym=JW1670;gene_synonym=ynhB;ec_number=4.4.1.16;experiment=N-terminus verified by Edman degradation: PMID 10329673;codon_start=1;transl_table=11;product=cysteine desulfurase%2C stimulated by SufE%3B selenocysteine lyase%2C PLP-dependent;protein_id=AAC74750.1;db_xref=GI:1787970;db_xref=ASAP:ABE-0005610;db_xref=UniProtKB/Swiss-Prot:P77444;db_xref=EcoGene:EG13962 EMBL gene 1760520 1761791 . - . ID=.3673;gene=sufD;locus_tag=b1681;gene_synonym=ECK1677;gene_synonym=JW1671;gene_synonym=ynhC;db_xref=EcoGene:EG13963 EMBL CDS 1760520 1761791 . - 0 ID=.3674;gene=sufD;locus_tag=b1681;gene_synonym=ECK1677;gene_synonym=JW1671;gene_synonym=ynhC;codon_start=1;transl_table=11;product=component of SufBCD Fe-S cluster assembly scaffold;protein_id=AAC74751.1;db_xref=GI:1787971;db_xref=ASAP:ABE-0005617;db_xref=UniProtKB/Swiss-Prot:P77689;db_xref=EcoGene:EG13963 EMBL gene 1761766 1762512 . - . ID=.3675;gene=sufC;locus_tag=b1682;gene_synonym=ECK1678;gene_synonym=JW1672;gene_synonym=ynhD;db_xref=EcoGene:EG13964 EMBL CDS 1761766 1762512 . - 0 ID=.3676;gene=sufC;locus_tag=b1682;gene_synonym=ECK1678;gene_synonym=JW1672;gene_synonym=ynhD;note=putative ATP-binding component of a transport system%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=SufBCD Fe-S cluster assembly scaffold protein%2C ATP-binding protein;protein_id=AAC74752.1;db_xref=GI:1787972;db_xref=ASAP:ABE-0005619;db_xref=UniProtKB/Swiss-Prot:P77499;db_xref=EcoGene:EG13964 EMBL gene 1762522 1764009 . - . ID=.3677;gene=sufB;locus_tag=b1683;gene_synonym=ECK1679;gene_synonym=JW5273;gene_synonym=ynhE;db_xref=EcoGene:EG13965 EMBL CDS 1762522 1764009 . - 0 ID=.3678;gene=sufB;locus_tag=b1683;gene_synonym=ECK1679;gene_synonym=JW5273;gene_synonym=ynhE;note=GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=component of SufBCD Fe-S cluster assembly scaffold;protein_id=AAC74753.2;db_xref=GI:87081955;db_xref=ASAP:ABE-0005621;db_xref=UniProtKB/Swiss-Prot:P77522;db_xref=EcoGene:EG13965 EMBL gene 1764018 1764386 . - . ID=.3679;gene=sufA;locus_tag=b1684;gene_synonym=ECK1680;gene_synonym=JW1674;gene_synonym=ydiC;db_xref=EcoGene:EG11378 EMBL CDS 1764018 1764386 . - 0 ID=.3680;gene=sufA;locus_tag=b1684;gene_synonym=ECK1680;gene_synonym=JW1674;gene_synonym=ydiC;codon_start=1;transl_table=11;product=Fe-S cluster assembly protein;protein_id=AAC74754.1;db_xref=GI:1787974;db_xref=ASAP:ABE-0005624;db_xref=UniProtKB/Swiss-Prot:P77667;db_xref=EcoGene:EG11378 EMBL gene 1764713 1764780 . - . ID=.3681;gene=rydB;locus_tag=b4430;gene_synonym=ECK1681;gene_synonym=IS082;gene_synonym=JWR0236;gene_synonym=tpe7;db_xref=EcoGene:EG31145 EMBL ncRNA 1764713 1764780 . - . ID=.3682;ncrna_class=other;gene=rydB;locus_tag=b4430;gene_synonym=ECK1681;gene_synonym=IS082;gene_synonym=JWR0236;gene_synonym=tpe7;product=novel sRNA%2C function unknown;note=identified in a large scale screen;db_xref=ASAP:ABE-0047250;db_xref=EcoGene:EG31145 EMBL gene 1764934 1765122 . - . ID=.3683;gene=ydiH;locus_tag=b1685;gene_synonym=ECK1682;gene_synonym=JW1675;db_xref=EcoGene:EG13967 EMBL CDS 1764934 1765122 . - 0 ID=.3684;gene=ydiH;locus_tag=b1685;gene_synonym=ECK1682;gene_synonym=JW1675;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC74755.2;db_xref=GI:226510945;db_xref=ASAP:ABE-0005626;db_xref=UniProtKB/Swiss-Prot:P64476;db_xref=EcoGene:EG13967 EMBL gene 1765222 1765632 . - . ID=.3685;gene=menI;locus_tag=b1686;gene_synonym=ECK1683;gene_synonym=JW1676;gene_synonym=ydiI;db_xref=EcoGene:EG13968 EMBL CDS 1765222 1765632 . - 0 ID=.3686;gene=menI;locus_tag=b1686;gene_synonym=ECK1683;gene_synonym=JW1676;gene_synonym=ydiI;ec_number=3.1.2.28;function=Enzyme%3B Biosynthesis of cofactors%2C carriers: Menaquinone%2C ubiquinone;codon_start=1;transl_table=11;product=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase;protein_id=AAC74756.1;db_xref=GI:1787976;db_xref=ASAP:ABE-0005628;db_xref=UniProtKB/Swiss-Prot:P77781;db_xref=EcoGene:EG13968 EMBL gene 1765629 1768685 . - . ID=.3687;gene=ydiJ;locus_tag=b1687;gene_synonym=ECK1684;gene_synonym=JW1677;db_xref=EcoGene:EG13969 EMBL CDS 1765629 1768685 . - 0 ID=.3688;gene=ydiJ;locus_tag=b1687;gene_synonym=ECK1684;gene_synonym=JW1677;function=putative enzyme%3B Not classified;note=putative oxidase;codon_start=1;transl_table=11;product=putative FAD-linked oxidoreductase;protein_id=AAC74757.1;db_xref=GI:1787977;db_xref=ASAP:ABE-0005632;db_xref=UniProtKB/Swiss-Prot:P77748;db_xref=EcoGene:EG13969 EMBL gene 1769074 1770186 . + . ID=.3689;gene=ydiK;locus_tag=b1688;gene_synonym=ECK1685;gene_synonym=JW1678;db_xref=EcoGene:EG13970 EMBL CDS 1769074 1770186 . + 0 ID=.3690;gene=ydiK;locus_tag=b1688;gene_synonym=ECK1685;gene_synonym=JW1678;codon_start=1;transl_table=11;product=UPF0118 family inner membrane protein;protein_id=AAC74758.1;db_xref=GI:1787979;db_xref=ASAP:ABE-0005637;db_xref=UniProtKB/Swiss-Prot:P0AFS7;db_xref=EcoGene:EG13970 EMBL gene 1770372 1770477 . + . ID=.3691;gene=rprA;locus_tag=b4431;gene_synonym=ECK1686;gene_synonym=IS083;gene_synonym=JWR0203;gene_synonym=psrA5;db_xref=EcoGene:EG31130 EMBL ncRNA 1770372 1770477 . + . ID=.3692;ncrna_class=antisense_RNA;gene=rprA;locus_tag=b4431;gene_synonym=ECK1686;gene_synonym=IS083;gene_synonym=JWR0203;gene_synonym=psrA5;product=sRNA antisense activator for RpoS translation%2C Hfq-dependent;note=RprA RNA%3B positive regulatory RNA for rpoS translation;db_xref=ASAP:ABE-0047251;db_xref=EcoGene:EG31130 EMBL gene 1770615 1770971 . + . ID=.3693;gene=ydiL;locus_tag=b1689;gene_synonym=ECK1687;gene_synonym=JW1679;db_xref=EcoGene:EG13971 EMBL CDS 1770615 1770971 . + 0 ID=.3694;gene=ydiL;locus_tag=b1689;gene_synonym=ECK1687;gene_synonym=JW1679;codon_start=1;transl_table=11;product=putative HTH domain DNA-binding protein;protein_id=AAC74759.2;db_xref=GI:87081956;db_xref=ASAP:ABE-0005641;db_xref=UniProtKB/Swiss-Prot:P76196;db_xref=EcoGene:EG13971 EMBL gene 1771071 1772285 . + . ID=.3695;gene=ydiM;locus_tag=b1690;gene_synonym=ECK1688;gene_synonym=JW1680;db_xref=EcoGene:EG13972 EMBL CDS 1771071 1772285 . + 0 ID=.3696;gene=ydiM;locus_tag=b1690;gene_synonym=ECK1688;gene_synonym=JW1680;function=putative transport%3B Not classified;note=putative transport system permease protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative MFS transporter%2C membrane protein;protein_id=AAC74760.1;db_xref=GI:1787981;db_xref=ASAP:ABE-0005645;db_xref=UniProtKB/Swiss-Prot:P76197;db_xref=EcoGene:EG13972 EMBL gene 1772512 1773777 . + . ID=.3697;gene=ydiN;locus_tag=b1691;gene_synonym=ECK1689;gene_synonym=JW5274;db_xref=EcoGene:EG13973 EMBL CDS 1772512 1773777 . + 0 ID=.3698;gene=ydiN;locus_tag=b1691;gene_synonym=ECK1689;gene_synonym=JW5274;function=putative transport%3B Not classified;note=putative amino acid/amine transport protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative MFS transporter%2C membrane protein;protein_id=AAC74761.4;db_xref=GI:226510946;db_xref=ASAP:ABE-0005648;db_xref=UniProtKB/Swiss-Prot:P76198;db_xref=EcoGene:EG13973 EMBL gene 1773789 1774655 . + . ID=.3699;gene=ydiB;locus_tag=b1692;gene_synonym=ECK1690;gene_synonym=JW1682;db_xref=EcoGene:EG11234 EMBL CDS 1773789 1774655 . + 0 ID=.3700;gene=ydiB;locus_tag=b1692;gene_synonym=ECK1690;gene_synonym=JW1682;ec_number=1.1.1.25;function=putative enzyme%3B Not classified;note=putative oxidoreductase;codon_start=1;transl_table=11;product=quinate/shikimate 5-dehydrogenase%2C NAD(P)-binding;protein_id=AAC74762.1;db_xref=GI:1787983;db_xref=ASAP:ABE-0005651;db_xref=UniProtKB/Swiss-Prot:P0A6D5;db_xref=EcoGene:EG11234 EMBL gene 1774686 1775444 . + . ID=.3701;gene=aroD;locus_tag=b1693;gene_synonym=ECK1691;gene_synonym=JW1683;db_xref=EcoGene:EG10076 EMBL CDS 1774686 1775444 . + 0 ID=.3702;gene=aroD;locus_tag=b1693;gene_synonym=ECK1691;gene_synonym=JW1683;ec_number=4.2.1.10;function=enzyme%3B Amino acid biosynthesis: Chorismate;experiment=N-terminus verified by Edman degradation: PMID 3541912;note=GO_process: GO:0009423 - chorismate biosynthetic process;codon_start=1;transl_table=11;product=3-dehydroquinate dehydratase;protein_id=AAC74763.1;db_xref=GI:1787984;db_xref=ASAP:ABE-0005653;db_xref=UniProtKB/Swiss-Prot:P05194;db_xref=EcoGene:EG10076 EMBL gene 1775587 1777182 . + . ID=.3703;gene=ydiF;locus_tag=b1694;gene_synonym=ECK1692;gene_synonym=JW1684;db_xref=EcoGene:EG12432 EMBL CDS 1775587 1777182 . + 0 ID=.3704;gene=ydiF;locus_tag=b1694;gene_synonym=ECK1692;gene_synonym=JW1684;function=putative enzyme%3B Not classified;note=putative enzyme%3B GO_process: GO:0019395 - fatty acid oxidation;codon_start=1;transl_table=11;product=putative acetyl-CoA:acetoacetyl-CoA transferase: alpha subunit/beta subunit;protein_id=AAC74764.1;db_xref=GI:1787985;db_xref=ASAP:ABE-0005656;db_xref=UniProtKB/Swiss-Prot:P37766;db_xref=EcoGene:EG12432 EMBL gene 1777196 1778347 . + . ID=.3705;gene=ydiO;locus_tag=b1695;gene_synonym=ECK1693;gene_synonym=JW5275;db_xref=EcoGene:EG13974 EMBL CDS 1777196 1778347 . + 0 ID=.3706;gene=ydiO;locus_tag=b1695;gene_synonym=ECK1693;gene_synonym=JW5275;function=putative enzyme%3B Not classified;note=putative oxidoreductase;codon_start=1;transl_table=11;product=putative acyl-CoA dehydrogenase;protein_id=AAC74765.2;db_xref=GI:87081958;db_xref=ASAP:ABE-0005658;db_xref=UniProtKB/Swiss-Prot:P0A9U8;db_xref=EcoGene:EG13974 EMBL gene 1778390 1779301 . - . ID=.3707;gene=ydiP;locus_tag=b1696;gene_synonym=ECK1694;gene_synonym=JW1686;db_xref=EcoGene:EG13975 EMBL CDS 1778390 1779301 . - 0 ID=.3708;gene=ydiP;locus_tag=b1696;gene_synonym=ECK1694;gene_synonym=JW1686;function=putative regulator%3B Not classified;note=putative ARAC-type regulatory protein%3B GO_process: GO:0006350 - transcription%3B GO_process: GO:0006355 - regulation of transcription%2C DNA-dependent;codon_start=1;transl_table=11;product=putative DNA-binding transcriptional regulator;protein_id=AAC74766.1;db_xref=GI:1787987;db_xref=ASAP:ABE-0005660;db_xref=UniProtKB/Swiss-Prot:P77402;db_xref=EcoGene:EG13975 EMBL gene 1779617 1780381 . + . ID=.3709;gene=ydiQ;locus_tag=b1697;gene_synonym=ECK1695;gene_synonym=JW5276;db_xref=EcoGene:EG13976 EMBL CDS 1779617 1780381 . + 0 ID=.3710;gene=ydiQ;locus_tag=b1697;gene_synonym=ECK1695;gene_synonym=JW5276;function=putative enzyme%3B Not classified;note=putative transport protein;codon_start=1;transl_table=11;product=putative electron transfer flavoprotein subunit;protein_id=AAC74767.1;db_xref=GI:2367123;db_xref=ASAP:ABE-0005666;db_xref=UniProtKB/Swiss-Prot:P76201;db_xref=EcoGene:EG13976 EMBL gene 1780401 1781339 . + . ID=.3711;gene=ydiR;locus_tag=b1698;gene_synonym=ECK1696;gene_synonym=JW1688;db_xref=EcoGene:EG13977 EMBL CDS 1780401 1781339 . + 0 ID=.3712;gene=ydiR;locus_tag=b1698;gene_synonym=ECK1696;gene_synonym=JW1688;function=putative enzyme%3B Not classified;note=putative flavoprotein%3B GO_function: GO:0009055 - electron carrier activity;codon_start=1;transl_table=11;product=putative electron transfer flavoprotein%2C FAD-binding subunit;protein_id=AAC74768.1;db_xref=GI:1787990;db_xref=ASAP:ABE-0005668;db_xref=UniProtKB/Swiss-Prot:P77378;db_xref=EcoGene:EG13977 EMBL gene 1781395 1782684 . + . ID=.3713;gene=ydiS;locus_tag=b1699;gene_synonym=ECK1697;gene_synonym=JW1689;db_xref=EcoGene:EG13978 EMBL CDS 1781395 1782684 . + 0 ID=.3714;gene=ydiS;locus_tag=b1699;gene_synonym=ECK1697;gene_synonym=JW1689;function=putative enzyme%3B Not classified;note=flavoprotein%3B probably electron transport%3B GO_function: GO:0009055 - electron carrier activity;codon_start=1;transl_table=11;product=putative oxidoreductase;protein_id=AAC74769.1;db_xref=GI:1787991;db_xref=ASAP:ABE-0005671;db_xref=UniProtKB/Swiss-Prot:P77337;db_xref=EcoGene:EG13978 EMBL gene 1782681 1782974 . + . ID=.3715;gene=ydiT;locus_tag=b1700;gene_synonym=ECK1698;gene_synonym=JW1690;db_xref=EcoGene:EG13979 EMBL CDS 1782681 1782974 . + 0 ID=.3716;gene=ydiT;locus_tag=b1700;gene_synonym=ECK1698;gene_synonym=JW1690;note=GO_function: GO:0009055 - electron carrier activity;codon_start=1;transl_table=11;product=putative 3Fe-4S ferredoxin-type protein;protein_id=AAC74770.1;db_xref=GI:1787992;db_xref=ASAP:ABE-0005674;db_xref=UniProtKB/Swiss-Prot:P77714;db_xref=EcoGene:EG13979 EMBL gene 1783031 1784677 . + . ID=.3717;gene=fadK;locus_tag=b1701;gene_synonym=ECK1699;gene_synonym=JW5910;gene_synonym=ydiD;db_xref=EcoGene:EG12357 EMBL CDS 1783031 1784677 . + 0 ID=.3718;gene=fadK;locus_tag=b1701;gene_synonym=ECK1699;gene_synonym=JW5910;gene_synonym=ydiD;function=putative enzyme%3B Not classified;note=putative ligase/synthetase;codon_start=1;transl_table=11;product=short chain acyl-CoA synthetase%2C anaerobic;protein_id=AAC74771.2;db_xref=GI:145693145;db_xref=ASAP:ABE-0005676;db_xref=UniProtKB/Swiss-Prot:P38135;db_xref=EcoGene:EG12357 EMBL gene 1784734 1787112 . - . ID=.3719;gene=ppsA;locus_tag=b1702;gene_synonym=ECK1700;gene_synonym=JW1692;gene_synonym=pps;db_xref=EcoGene:EG10759 EMBL CDS 1784734 1787112 . - 0 ID=.3720;gene=ppsA;locus_tag=b1702;gene_synonym=ECK1700;gene_synonym=JW1692;gene_synonym=pps;ec_number=2.7.9.2;function=enzyme%3B Central intermediary metabolism: Gluconeogenesis;note=GO_process: GO:0006094 - gluconeogenesis;codon_start=1;transl_table=11;product=phosphoenolpyruvate synthase;protein_id=AAC74772.1;db_xref=GI:1787994;db_xref=ASAP:ABE-0005678;db_xref=UniProtKB/Swiss-Prot:P23538;db_xref=EcoGene:EG10759 EMBL gene 1787445 1788278 . + . ID=.3721;gene=ppsR;locus_tag=b1703;gene_synonym=duf299;gene_synonym=ECK1701;gene_synonym=JW1693;gene_synonym=ydiA;db_xref=EcoGene:EG11132 EMBL CDS 1787445 1788278 . + 0 ID=.3722;gene=ppsR;locus_tag=b1703;gene_synonym=duf299;gene_synonym=ECK1701;gene_synonym=JW1693;gene_synonym=ydiA;function=regulatory enzyme%3B Central intermediary metabolism: Gluconeogenesis;codon_start=1;transl_table=11;product=PEP synthase kinase and PEP synthase pyrophosphorylase;protein_id=AAC74773.1;db_xref=GI:1787995;db_xref=ASAP:ABE-0005682;db_xref=UniProtKB/Swiss-Prot:P0A8A4;db_xref=EcoGene:EG11132 EMBL gene 1788435 1789481 . + . ID=.3723;gene=aroH;locus_tag=b1704;gene_synonym=ECK1702;gene_synonym=JW1694;db_xref=EcoGene:EG10080 EMBL CDS 1788435 1789481 . + 0 ID=.3724;gene=aroH;locus_tag=b1704;gene_synonym=ECK1702;gene_synonym=JW1694;ec_number=2.5.1.54;function=enzyme%3B Amino acid biosynthesis: Tryptophan;experiment=N-terminus verified by Edman degradation: PMID 6167722;note=3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase%2C tryptophan repressible)%3B GO_process: GO:0000162 - tryptophan biosynthetic process;codon_start=1;transl_table=11;product=3-deoxy-D-arabino-heptulosonate-7-phosphate synthase%2C tryptophan repressible;protein_id=AAC74774.1;db_xref=GI:1787996;db_xref=ASAP:ABE-0005686;db_xref=UniProtKB/Swiss-Prot:P00887;db_xref=EcoGene:EG10080 EMBL gene 1789613 1789804 . + . ID=.3725;gene=ydiE;locus_tag=b1705;gene_synonym=ECK1703;gene_synonym=JW1695;db_xref=EcoGene:EG12391 EMBL CDS 1789613 1789804 . + 0 ID=.3726;gene=ydiE;locus_tag=b1705;gene_synonym=ECK1703;gene_synonym=JW1695;codon_start=1;transl_table=11;product=hemin uptake protein HemP homolog;protein_id=AAC74775.1;db_xref=GI:1787998;db_xref=ASAP:ABE-0005692;db_xref=UniProtKB/Swiss-Prot:P0ACX9;db_xref=EcoGene:EG12391 EMBL gene 1789808 1791244 . - . ID=.3727;gene=ydiU;locus_tag=b1706;gene_synonym=ECK1704;gene_synonym=JW1696;db_xref=EcoGene:EG13980 EMBL CDS 1789808 1791244 . - 0 ID=.3728;gene=ydiU;locus_tag=b1706;gene_synonym=ECK1704;gene_synonym=JW1696;codon_start=1;transl_table=11;product=UPF0061 family protein;protein_id=AAC74776.1;db_xref=GI:1787999;db_xref=ASAP:ABE-0005694;db_xref=UniProtKB/Swiss-Prot:P77649;db_xref=EcoGene:EG13980 EMBL gene 1791307 1792020 . - . ID=.3729;gene=ydiV;locus_tag=b1707;gene_synonym=cdgR;gene_synonym=ECK1705;gene_synonym=JW1697;db_xref=EcoGene:EG13981 EMBL CDS 1791307 1792020 . - 0 ID=.3730;gene=ydiV;locus_tag=b1707;gene_synonym=cdgR;gene_synonym=ECK1705;gene_synonym=JW1697;codon_start=1;transl_table=11;product=anti-FlhD4C2 factor%2C inactive EAL family phosphodiesterase;protein_id=AAC74777.1;db_xref=GI:1788000;db_xref=ASAP:ABE-0005696;db_xref=UniProtKB/Swiss-Prot:P76204;db_xref=EcoGene:EG13981 EMBL gene 1792267 1792731 . - . ID=.3731;gene=nlpC;locus_tag=b1708;gene_synonym=ECK1706;gene_synonym=JW1698;db_xref=EcoGene:EG11133 EMBL CDS 1792267 1792731 . - 0 ID=.3732;gene=nlpC;locus_tag=b1708;gene_synonym=ECK1706;gene_synonym=JW1698;function=membrane%3B Macromolecule synthesis%2C modification: Lipoprotein;note=lipoprotein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative C40 clan peptidase lipoprotein;protein_id=AAC74778.1;db_xref=GI:1788001;db_xref=ASAP:ABE-0005704;db_xref=UniProtKB/Swiss-Prot:P23898;db_xref=EcoGene:EG11133 EMBL gene 1792809 1793558 . - . ID=.3733;gene=btuD;locus_tag=b1709;gene_synonym=ECK1707;gene_synonym=JW1699;db_xref=EcoGene:EG10128 EMBL CDS 1792809 1793558 . - 0 ID=.3734;gene=btuD;locus_tag=b1709;gene_synonym=ECK1707;gene_synonym=JW1699;ec_number=3.6.3.33;function=transport%3B Transport of small molecules: Other;note=ATP-binding component of vitamin B12 transport system%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=vitamin B12 ABC transporter ATPase;protein_id=AAC74779.1;db_xref=GI:1788002;db_xref=ASAP:ABE-0005707;db_xref=UniProtKB/Swiss-Prot:P06611;db_xref=EcoGene:EG10128 EMBL gene 1793558 1794109 . - . ID=.3735;gene=btuE;locus_tag=b1710;gene_synonym=ECK1708;gene_synonym=JW1700;db_xref=EcoGene:EG10129 EMBL CDS 1793558 1794109 . - 0 ID=.3736;gene=btuE;locus_tag=b1710;gene_synonym=ECK1708;gene_synonym=JW1700;function=transport%3B Transport of small molecules: Other;note=vitamin B12 transport%3B GO_component: GO:0042597 - periplasmic space;codon_start=1;transl_table=11;product=glutathione peroxidase;protein_id=AAC74780.1;db_xref=GI:1788003;db_xref=ASAP:ABE-0005709;db_xref=UniProtKB/Swiss-Prot:P06610;db_xref=EcoGene:EG10129 EMBL gene 1794172 1795152 . - . ID=.3737;gene=btuC;locus_tag=b1711;gene_synonym=ECK1709;gene_synonym=JW1701;db_xref=EcoGene:EG10127 EMBL CDS 1794172 1795152 . - 0 ID=.3738;gene=btuC;locus_tag=b1711;gene_synonym=ECK1709;gene_synonym=JW1701;function=transport%3B Transport of small molecules: Other;note=vitamin B12 transport permease protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=vitamin B12 ABC transporter permease;protein_id=AAC74781.1;db_xref=GI:1788004;db_xref=ASAP:ABE-0005712;db_xref=UniProtKB/Swiss-Prot:P06609;db_xref=EcoGene:EG10127 EMBL gene 1795253 1795552 . - . ID=.3739;gene=ihfA;locus_tag=b1712;gene_synonym=ECK1710;gene_synonym=hid;gene_synonym=himA;gene_synonym=JW1702;db_xref=EcoGene:EG10440 EMBL CDS 1795253 1795552 . - 0 ID=.3740;gene=ihfA;locus_tag=b1712;gene_synonym=ECK1710;gene_synonym=hid;gene_synonym=himA;gene_synonym=JW1702;function=factor%3B DNA - replication%2C repair%2C restriction/modification;note=integration host factor (IHF)%2C alpha subunit%3B site specific recombination%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006310 - DNA recombination;codon_start=1;transl_table=11;product=integration host factor (IHF)%2C DNA-binding protein%2C alpha subunit;protein_id=AAC74782.1;db_xref=GI:1788005;db_xref=ASAP:ABE-0005715;db_xref=UniProtKB/Swiss-Prot:P0A6X7;db_xref=EcoGene:EG10440 EMBL gene 1795557 1797944 . - . ID=.3741;gene=pheT;locus_tag=b1713;gene_synonym=ECK1711;gene_synonym=JW1703;db_xref=EcoGene:EG10710 EMBL CDS 1795557 1797944 . - 0 ID=.3742;gene=pheT;locus_tag=b1713;gene_synonym=ECK1711;gene_synonym=JW1703;ec_number=6.1.1.20;function=enzyme%3B Aminoacyl tRNA synthetases%2C tRNA modification;note=phenylalanine tRNA synthetase%2C beta-subunit%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006418 - tRNA aminoacylation for protein translation;codon_start=1;transl_table=11;product=phenylalanine tRNA synthetase%2C beta subunit;protein_id=AAC74783.1;db_xref=GI:1788006;db_xref=ASAP:ABE-0005717;db_xref=UniProtKB/Swiss-Prot:P07395;db_xref=EcoGene:EG10710 EMBL gene 1797959 1798942 . - . ID=.3743;gene=pheS;locus_tag=b1714;gene_synonym=ECK1712;gene_synonym=JW5277;gene_synonym=phe-act;db_xref=EcoGene:EG10709 EMBL CDS 1797959 1798942 . - 0 ID=.3744;gene=pheS;locus_tag=b1714;gene_synonym=ECK1712;gene_synonym=JW5277;gene_synonym=phe-act;ec_number=6.1.1.20;function=enzyme%3B Aminoacyl tRNA synthetases%2C tRNA modification;note=phenylalanine tRNA synthetase%2C alpha-subunit%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006418 - tRNA aminoacylation for protein translation;codon_start=1;transl_table=11;product=phenylalanine tRNA synthetase%2C alpha subunit;protein_id=AAC74784.1;db_xref=GI:1788007;db_xref=ASAP:ABE-0005722;db_xref=UniProtKB/Swiss-Prot:P08312;db_xref=EcoGene:EG10709 EMBL gene 1799226 1799270 . - . ID=.3745;gene=pheM;locus_tag=b1715;gene_synonym=ECK1713;gene_synonym=JW1705;gene_synonym=phtL;db_xref=EcoGene:EG11272 EMBL CDS 1799226 1799270 . - 0 ID=.3746;gene=pheM;locus_tag=b1715;gene_synonym=ECK1713;gene_synonym=JW1705;gene_synonym=phtL;function=leader%3B Aminoacyl tRNA synthetases%2C tRNA modification;note=phenylalanyl-tRNA synthetase (pheST) operon leader peptide%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006418 - tRNA aminoacylation for protein translation;codon_start=1;transl_table=11;product=phenylalanyl-tRNA synthetase operon leader peptide;protein_id=AAC74785.1;db_xref=GI:1788008;db_xref=ASAP:ABE-0005727;db_xref=UniProtKB/Swiss-Prot:P0AD74;db_xref=EcoGene:EG11272 EMBL gene 1799393 1799749 . - . ID=.3747;gene=rplT;locus_tag=b1716;gene_synonym=ECK1714;gene_synonym=JW1706;gene_synonym=pdzA;db_xref=EcoGene:EG10881 EMBL CDS 1799393 1799749 . - 0 ID=.3748;gene=rplT;locus_tag=b1716;gene_synonym=ECK1714;gene_synonym=JW1706;gene_synonym=pdzA;function=structural component%3B Ribosomal proteins - synthesis%2C modification;note=50S ribosomal subunit protein L20%2C and regulator%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0003735 - structural constituent of ribosome%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=50S ribosomal subunit protein L20;protein_id=AAC74786.1;db_xref=GI:1788009;db_xref=ASAP:ABE-0005729;db_xref=UniProtKB/Swiss-Prot:P0A7L3;db_xref=EcoGene:EG10881 EMBL gene 1799802 1799999 . - . ID=.3749;gene=rpmI;locus_tag=b1717;gene_synonym=ECK1715;gene_synonym=JW1707;db_xref=EcoGene:EG11231 EMBL CDS 1799802 1799999 . - 0 ID=.3750;gene=rpmI;locus_tag=b1717;gene_synonym=ECK1715;gene_synonym=JW1707;function=structural component%3B Ribosomal proteins - synthesis%2C modification;note=50S ribosomal subunit protein A%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0003735 - structural constituent of ribosome%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=50S ribosomal subunit protein L35;protein_id=AAC74787.1;db_xref=GI:1788010;db_xref=ASAP:ABE-0005732;db_xref=UniProtKB/Swiss-Prot:P0A7Q1;db_xref=EcoGene:EG11231 EMBL gene 1800096 1800638 . - . ID=.3751;gene=infC;locus_tag=b1718;gene_synonym=ECK1716;gene_synonym=fit;gene_synonym=JW5829;gene_synonym=srjA;db_xref=EcoGene:EG10506 EMBL CDS 1800096 1800638 . - 0 ID=.3752;gene=infC;locus_tag=b1718;gene_synonym=ECK1716;gene_synonym=fit;gene_synonym=JW5829;gene_synonym=srjA;function=factor%3B Proteins - translation and modification;experiment=N-terminus verified by Edman degradation: PMID 330233;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=translation initiation factor IF-3;protein_id=AAC74788.1;db_xref=GI:1788012;db_xref=ASAP:ABE-0005734;db_xref=UniProtKB/Swiss-Prot:P0A707;db_xref=EcoGene:EG10506 EMBL gene 1800642 1802570 . - . ID=.3753;gene=thrS;locus_tag=b1719;gene_synonym=ECK1717;gene_synonym=JW1709;db_xref=EcoGene:EG11001 EMBL CDS 1800642 1802570 . - 0 ID=.3754;gene=thrS;locus_tag=b1719;gene_synonym=ECK1717;gene_synonym=JW1709;ec_number=6.1.1.3;function=enzyme%3B Aminoacyl tRNA synthetases%2C tRNA modification;note=threonine tRNA synthetase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006418 - tRNA aminoacylation for protein translation;codon_start=1;transl_table=11;product=threonyl-tRNA synthetase;protein_id=AAC74789.1;db_xref=GI:1788013;db_xref=ASAP:ABE-0005736;db_xref=UniProtKB/Swiss-Prot:P0A8M3;db_xref=EcoGene:EG11001 EMBL gene 1803094 1804993 . + . ID=.3755;gene=arpB;locus_tag=b4494;gene_synonym=ECK1718;gene_synonym=JW1710;gene_synonym=JW5278;gene_synonym=ydiW;gene_synonym=ydiX;pseudo=true;db_xref=EcoGene:EG13983 EMBL biological_region 1803094 1804993 . + 0 ID=.3756;featflags=type:CDS;gene=arpB;locus_tag=b4494;gene_synonym=ECK1718;gene_synonym=JW1710;gene_synonym=JW5278;gene_synonym=ydiW;gene_synonym=ydiX;note=pseudogene%2C ankyrin repeats;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0005740;db_xref=ASAP:ABE-0005742;db_xref=ASAP:ABE-0285095;db_xref=UniProtKB/Swiss-Prot:P76205;db_xref=EcoGene:EG13983 EMBL CDS 1803094 1803519 . + 0 Parent=.3756 EMBL CDS 1803518 1804993 . + 0 Parent=.3756 EMBL gene 1805165 1805272 . + . ID=.3759;gene=yniD;locus_tag=b4535;gene_synonym=ECK1719;gene_synonym=JW5911;db_xref=EcoGene:EG14423 EMBL CDS 1805165 1805272 . + 0 ID=.3760;gene=yniD;locus_tag=b4535;gene_synonym=ECK1719;gene_synonym=JW5911;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=ABD18671.2;db_xref=GI:145693146;db_xref=ASAP:ABE-0285056;db_xref=UniProtKB/Swiss-Prot:Q2EES1;db_xref=EcoGene:EG14423 EMBL gene 1805325 1806083 . - . ID=.3761;gene=ydiY;locus_tag=b1722;gene_synonym=ECK1720;gene_synonym=JW1711;db_xref=EcoGene:EG13984 EMBL CDS 1805325 1806083 . - 0 ID=.3762;gene=ydiY;locus_tag=b1722;gene_synonym=ECK1720;gene_synonym=JW1711;codon_start=1;transl_table=11;product=acid-inducible putative outer membrane protein;protein_id=AAC74792.1;db_xref=GI:1788016;db_xref=ASAP:ABE-0005744;db_xref=UniProtKB/Swiss-Prot:P76206;db_xref=EcoGene:EG13984 EMBL gene 1806370 1807299 . + . ID=.3763;gene=pfkB;locus_tag=b1723;gene_synonym=ECK1721;gene_synonym=JW5280;db_xref=EcoGene:EG10700 EMBL CDS 1806370 1807299 . + 0 ID=.3764;gene=pfkB;locus_tag=b1723;gene_synonym=ECK1721;gene_synonym=JW5280;ec_number=2.7.1.11;function=enzyme%3B Energy metabolism%2C carbon: Glycolysis;note=6-phosphofructokinase II%3B suppressor of pfkA%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=6-phosphofructokinase II;protein_id=AAC74793.1;db_xref=GI:1788017;db_xref=ASAP:ABE-0005748;db_xref=UniProtKB/Swiss-Prot:P06999;db_xref=EcoGene:EG10700 EMBL gene 1807400 1807690 . + . ID=.3765;gene=ydiZ;locus_tag=b1724;gene_synonym=ECK1722;gene_synonym=JW1713;db_xref=EcoGene:EG13985 EMBL CDS 1807400 1807690 . + 0 ID=.3766;gene=ydiZ;locus_tag=b1724;gene_synonym=ECK1722;gene_synonym=JW1713;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC74794.1;db_xref=GI:1788018;db_xref=ASAP:ABE-0005751;db_xref=UniProtKB/Swiss-Prot:P64479;db_xref=EcoGene:EG13985 EMBL gene 1807796 1808656 . + . ID=.3767;gene=yniA;locus_tag=b1725;gene_synonym=ECK1723;gene_synonym=JW1714;db_xref=EcoGene:EG13986 EMBL CDS 1807796 1808656 . + 0 ID=.3768;gene=yniA;locus_tag=b1725;gene_synonym=ECK1723;gene_synonym=JW1714;codon_start=1;transl_table=11;product=fructosamine kinase family protein;protein_id=AAC74795.1;db_xref=GI:1788019;db_xref=ASAP:ABE-0005755;db_xref=UniProtKB/Swiss-Prot:P77739;db_xref=EcoGene:EG13986 EMBL gene 1808697 1809233 . - . ID=.3769;gene=yniB;locus_tag=b1726;gene_synonym=ECK1724;gene_synonym=JW1715;db_xref=EcoGene:EG13987 EMBL CDS 1808697 1809233 . - 0 ID=.3770;gene=yniB;locus_tag=b1726;gene_synonym=ECK1724;gene_synonym=JW1715;codon_start=1;transl_table=11;product=putative inner membrane protein;protein_id=AAC74796.1;db_xref=GI:1788020;db_xref=ASAP:ABE-0005757;db_xref=UniProtKB/Swiss-Prot:P76208;db_xref=EcoGene:EG13987 EMBL gene 1809380 1810048 . + . ID=.3771;gene=yniC;locus_tag=b1727;gene_synonym=ECK1725;gene_synonym=JW1716;db_xref=EcoGene:EG13988 EMBL CDS 1809380 1810048 . + 0 ID=.3772;gene=yniC;locus_tag=b1727;gene_synonym=ECK1725;gene_synonym=JW1716;function=putative enzyme%3B Not classified;note=putative phosphatase;codon_start=1;transl_table=11;product=2-deoxyglucose-6-P phosphatase;protein_id=AAC74797.1;db_xref=GI:1788021;db_xref=ASAP:ABE-0005761;db_xref=UniProtKB/Swiss-Prot:P77247;db_xref=EcoGene:EG13988 EMBL gene 1810211 1810801 . + . ID=.3773;gene=ydjM;locus_tag=b1728;gene_synonym=ECK1726;gene_synonym=JW5281;db_xref=EcoGene:EG13989 EMBL CDS 1810211 1810801 . + 0 ID=.3774;gene=ydjM;locus_tag=b1728;gene_synonym=ECK1726;gene_synonym=JW5281;note=GO_process: GO:0009432 - SOS response;codon_start=1;transl_table=11;product=inner membrane protein regulated by LexA;protein_id=AAC74798.4;db_xref=GI:226510947;db_xref=ASAP:ABE-0005768;db_xref=UniProtKB/Swiss-Prot:P64481;db_xref=EcoGene:EG13989 EMBL gene 1810934 1812325 . + . ID=.3775;gene=ydjN;locus_tag=b1729;gene_synonym=ECK1727;gene_synonym=JW1718;db_xref=EcoGene:EG13990 EMBL CDS 1810934 1812325 . + 0 ID=.3776;gene=ydjN;locus_tag=b1729;gene_synonym=ECK1727;gene_synonym=JW1718;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=putative transporter;protein_id=AAC74799.1;db_xref=GI:1788024;db_xref=ASAP:ABE-0005771;db_xref=UniProtKB/Swiss-Prot:P77529;db_xref=EcoGene:EG13990 EMBL gene 1812329 1813132 . - . ID=.3777;gene=ydjO;locus_tag=b1730;gene_synonym=ECK1728;gene_synonym=JW1719;db_xref=EcoGene:EG13991 EMBL CDS 1812329 1813132 . - 0 ID=.3778;gene=ydjO;locus_tag=b1730;gene_synonym=ECK1728;gene_synonym=JW1719;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC74800.2;db_xref=GI:226510948;db_xref=ASAP:ABE-0005773;db_xref=UniProtKB/Swiss-Prot:P76210;db_xref=EcoGene:EG13991 EMBL gene 1813421 1813663 . - . ID=.3779;gene=cedA;locus_tag=b1731;gene_synonym=ECK1729;gene_synonym=JW1720;gene_synonym=ydjP;db_xref=EcoGene:EG13992 EMBL CDS 1813421 1813663 . - 0 ID=.3780;gene=cedA;locus_tag=b1731;gene_synonym=ECK1729;gene_synonym=JW1720;gene_synonym=ydjP;codon_start=1;transl_table=11;product=cell division modulator;protein_id=AAC74801.2;db_xref=GI:145693148;db_xref=ASAP:ABE-0005776;db_xref=UniProtKB/Swiss-Prot:P0AE60;db_xref=EcoGene:EG13992 EMBL gene 1813867 1816128 . + . ID=.3781;gene=katE;locus_tag=b1732;gene_synonym=ECK1730;gene_synonym=JW1721;db_xref=EcoGene:EG10509 EMBL CDS 1813867 1816128 . + 0 ID=.3782;gene=katE;locus_tag=b1732;gene_synonym=ECK1730;gene_synonym=JW1721;ec_number=1.11.1.6;function=enzyme%3B Detoxification;experiment=N-terminus verified by Edman degradation: PMID 3117785;note=catalase%3B hydroperoxidase HPII(III)%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006805 - xenobiotic metabolic process;codon_start=1;transl_table=11;product=catalase HPII%2C heme d-containing;protein_id=AAT48137.1;db_xref=GI:48994891;db_xref=ASAP:ABE-0005780;db_xref=UniProtKB/Swiss-Prot:P21179;db_xref=EcoGene:EG10509 EMBL repeat_region 1816185 1816373 . + . ID=.3783;note=RIP129 (repetitive extragenic palindromic) element%3B contains 3 REP sequences and 1 IHF site EMBL gene 1816386 1817135 . - . ID=.3784;gene=chbG;locus_tag=b1733;gene_synonym=celG;gene_synonym=ECK1731;gene_synonym=JW1722;gene_synonym=ydjC;db_xref=EcoGene:EG12198 EMBL CDS 1816386 1817135 . - 0 ID=.3785;gene=chbG;locus_tag=b1733;gene_synonym=celG;gene_synonym=ECK1731;gene_synonym=JW1722;gene_synonym=ydjC;function=enzyme%3B Degradation of small molecules: N%2CN'-diacetylchitobiose;codon_start=1;transl_table=11;product=chito-oligosaccharide deacetylase;protein_id=AAC74803.1;db_xref=GI:1788028;db_xref=ASAP:ABE-0005783;db_xref=UniProtKB/Swiss-Prot:P37794;db_xref=EcoGene:EG12198 EMBL gene 1817148 1818500 . - . ID=.3786;gene=chbF;locus_tag=b1734;gene_synonym=celF;gene_synonym=ECK1732;gene_synonym=JW1723;gene_synonym=ydjD;db_xref=EcoGene:EG10144 EMBL CDS 1817148 1818500 . - 0 ID=.3787;gene=chbF;locus_tag=b1734;gene_synonym=celF;gene_synonym=ECK1732;gene_synonym=JW1723;gene_synonym=ydjD;ec_number=3.2.1.86;function=enzyme%3B Degradation of small molecules: N%2CN'-diacetylchitobiose;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0009435 - NAD biosynthetic process;codon_start=1;transl_table=11;product=phospho-chitobiase%3B general 6-phospho-beta-glucosidase activity;protein_id=AAC74804.1;db_xref=GI:1788029;db_xref=ASAP:ABE-0005785;db_xref=UniProtKB/Swiss-Prot:P17411;db_xref=EcoGene:EG10144 EMBL gene 1818605 1819447 . - . ID=.3788;gene=chbR;locus_tag=b1735;gene_synonym=celD;gene_synonym=ECK1733;gene_synonym=JW1724;db_xref=EcoGene:EG10143 EMBL CDS 1818605 1819447 . - 0 ID=.3789;gene=chbR;locus_tag=b1735;gene_synonym=celD;gene_synonym=ECK1733;gene_synonym=JW1724;function=regulator%3B Degradation of small molecules: Carbon compounds;note=negative transcriptional regulator of cel operon%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=repressor of chb operon for N%2CN'-diacetylchitobiose utilization;protein_id=AAC74805.1;db_xref=GI:1788030;db_xref=ASAP:ABE-0005790;db_xref=UniProtKB/Swiss-Prot:P17410;db_xref=EcoGene:EG10143 EMBL gene 1819455 1819805 . - . ID=.3790;gene=chbA;locus_tag=b1736;gene_synonym=celC;gene_synonym=ECK1734;gene_synonym=JW1725;db_xref=EcoGene:EG10142 EMBL CDS 1819455 1819805 . - 0 ID=.3791;gene=chbA;locus_tag=b1736;gene_synonym=celC;gene_synonym=ECK1734;gene_synonym=JW1725;ec_number=2.7.1.69;function=enzyme%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=PTS family enzyme IIA%2C cellobiose/arbutin/salicin sugar-specific%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=N%2CN'-diacetylchitobiose-specific enzyme IIA component of PTS;protein_id=AAC74806.1;db_xref=GI:1788031;db_xref=ASAP:ABE-0005792;db_xref=UniProtKB/Swiss-Prot:P69791;db_xref=EcoGene:EG10142 EMBL gene 1819856 1821214 . - . ID=.3792;gene=chbC;locus_tag=b1737;gene_synonym=celB;gene_synonym=ECK1735;gene_synonym=JW1726;db_xref=EcoGene:EG10141 EMBL CDS 1819856 1821214 . - 0 ID=.3793;gene=chbC;locus_tag=b1737;gene_synonym=celB;gene_synonym=ECK1735;gene_synonym=JW1726;ec_number=2.7.1.69;function=enzyme%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=PEP-dependent phosphotransferase enzyme II for cellobiose%2C arbutin%2C and salicin%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=N%2CN'-diacetylchitobiose-specific enzyme IIC component of PTS;protein_id=AAC74807.1;db_xref=GI:1788032;db_xref=ASAP:ABE-0005795;db_xref=UniProtKB/Swiss-Prot:P17334;db_xref=EcoGene:EG10141 EMBL gene 1821299 1821619 . - . ID=.3794;gene=chbB;locus_tag=b1738;gene_synonym=celA;gene_synonym=ECK1736;gene_synonym=JW1727;db_xref=EcoGene:EG10140 EMBL CDS 1821299 1821619 . - 0 ID=.3795;gene=chbB;locus_tag=b1738;gene_synonym=celA;gene_synonym=ECK1736;gene_synonym=JW1727;ec_number=2.7.1.69;function=enzyme%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=PTS family enzyme IIB%2C cellobiose/arbutin/salicin sugar-specific%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=N%2CN'-diacetylchitobiose-specific enzyme IIB component of PTS;protein_id=AAC74808.1;db_xref=GI:1788034;db_xref=ASAP:ABE-0005797;db_xref=UniProtKB/Swiss-Prot:P69795;db_xref=EcoGene:EG10140 EMBL gene 1821918 1822256 . - . ID=.3796;gene=osmE;locus_tag=b1739;gene_synonym=anr;gene_synonym=ECK1737;gene_synonym=JW1728;db_xref=EcoGene:EG10044 EMBL CDS 1821918 1822256 . - 0 ID=.3797;gene=osmE;locus_tag=b1739;gene_synonym=anr;gene_synonym=ECK1737;gene_synonym=JW1728;function=regulator%3B Global regulatory functions;note=activator of ntrL gene%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0006350 - transcription%3B GO_process: GO:0006970 - response to osmotic stress;codon_start=1;transl_table=11;product=osmotically-inducible lipoprotein;protein_id=AAC74809.1;db_xref=GI:1788035;db_xref=ASAP:ABE-0005799;db_xref=UniProtKB/Swiss-Prot:P0ADB1;db_xref=EcoGene:EG10044 EMBL gene 1822458 1823285 . + . ID=.3798;gene=nadE;locus_tag=b1740;gene_synonym=ECK1738;gene_synonym=efg;gene_synonym=JW1729;gene_synonym=ntrL;db_xref=EcoGene:EG10663 EMBL CDS 1822458 1823285 . + 0 ID=.3799;gene=nadE;locus_tag=b1740;gene_synonym=ECK1738;gene_synonym=efg;gene_synonym=JW1729;gene_synonym=ntrL;ec_number=6.3.5.1;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Pyridine nucleotide;experiment=N-terminus verified by Edman degradation: PMID 3025172%2C9298646;note=NAD synthetase%2C prefers NH3 over glutamine%3B GO_process: GO:0009435 - NAD biosynthetic process;codon_start=1;transl_table=11;product=NAD synthetase%2C NH3/glutamine-dependent;protein_id=AAC74810.1;db_xref=GI:1788036;db_xref=ASAP:ABE-0005803;db_xref=UniProtKB/Swiss-Prot:P18843;db_xref=EcoGene:EG10663 EMBL repeat_region 1823331 1823428 . + . ID=.3800;note=RIP130 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 1823515 1824402 . + . ID=.3801;gene=cho;locus_tag=b1741;gene_synonym=dinM;gene_synonym=ECK1739;gene_synonym=JW1730;gene_synonym=sosD;gene_synonym=ydjQ;db_xref=EcoGene:EG13993 EMBL CDS 1823515 1824402 . + 0 ID=.3802;gene=cho;locus_tag=b1741;gene_synonym=dinM;gene_synonym=ECK1739;gene_synonym=JW1730;gene_synonym=sosD;gene_synonym=ydjQ;ec_number=3.1.25.-;function=putative enzyme%3B Not classified;note=putative excinuclease subunit;codon_start=1;transl_table=11;product=endonuclease of nucleotide excision repair;protein_id=AAC74811.1;db_xref=GI:1788037;db_xref=ASAP:ABE-0005807;db_xref=UniProtKB/Swiss-Prot:P76213;db_xref=EcoGene:EG13993 EMBL gene 1824362 1824937 . - . ID=.3803;gene=ves;locus_tag=b1742;gene_synonym=ECK1740;gene_synonym=JW1731;gene_synonym=ydjR;db_xref=EcoGene:EG13994 EMBL CDS 1824362 1824937 . - 0 ID=.3804;gene=ves;locus_tag=b1742;gene_synonym=ECK1740;gene_synonym=JW1731;gene_synonym=ydjR;experiment=N-terminus verified by Edman degradation: PMID 11873911;codon_start=1;transl_table=11;product=cold- and stress-inducible protein;protein_id=AAC74812.2;db_xref=GI:87081963;db_xref=ASAP:ABE-0005809;db_xref=UniProtKB/Swiss-Prot:P76214;db_xref=EcoGene:EG13994 EMBL gene 1825140 1825625 . - . ID=.3805;gene=spy;locus_tag=b1743;gene_synonym=ECK1741;gene_synonym=JW1732;db_xref=EcoGene:EG13490 EMBL CDS 1825140 1825625 . - 0 ID=.3806;gene=spy;locus_tag=b1743;gene_synonym=ECK1741;gene_synonym=JW1732;note=periplasmic protein related to spheroblast formation%3B GO_component: GO:0042597 - periplasmic space;codon_start=1;transl_table=11;product=periplasmic ATP-independent protein refolding chaperone%2C stress-induced;protein_id=AAC74813.1;db_xref=GI:1788039;db_xref=ASAP:ABE-0005812;db_xref=UniProtKB/Swiss-Prot:P77754;db_xref=EcoGene:EG13490 EMBL gene 1825955 1826923 . - . ID=.3807;gene=astE;locus_tag=b1744;gene_synonym=ECK1742;gene_synonym=JW1733;gene_synonym=ydjS;db_xref=EcoGene:EG13995 EMBL CDS 1825955 1826923 . - 0 ID=.3808;gene=astE;locus_tag=b1744;gene_synonym=ECK1742;gene_synonym=JW1733;gene_synonym=ydjS;ec_number=3.5.1.-;function=enzyme%3B Not classified;note=GO_process: GO:0009063 - cellular amino acid catabolic process;codon_start=1;transl_table=11;product=succinylglutamate desuccinylase;protein_id=AAC74814.1;db_xref=GI:1788040;db_xref=ASAP:ABE-0005815;db_xref=UniProtKB/Swiss-Prot:P76215;db_xref=EcoGene:EG13995 EMBL gene 1826916 1828259 . - . ID=.3809;gene=astB;locus_tag=b1745;gene_synonym=ECK1743;gene_synonym=JW1734;gene_synonym=ydjT;db_xref=EcoGene:EG13996 EMBL CDS 1826916 1828259 . - 0 ID=.3810;gene=astB;locus_tag=b1745;gene_synonym=ECK1743;gene_synonym=JW1734;gene_synonym=ydjT;ec_number=3.5.3.-;function=enzyme%3B Not classified;note=GO_process: GO:0009063 - cellular amino acid catabolic process;codon_start=1;transl_table=11;product=succinylarginine dihydrolase;protein_id=AAC74815.1;db_xref=GI:1788041;db_xref=ASAP:ABE-0005817;db_xref=UniProtKB/Swiss-Prot:P76216;db_xref=EcoGene:EG13996 EMBL gene 1828256 1829734 . - . ID=.3811;gene=astD;locus_tag=b1746;gene_synonym=ECK1744;gene_synonym=JW5282;gene_synonym=ydjU;db_xref=EcoGene:EG13997 EMBL CDS 1828256 1829734 . - 0 ID=.3812;gene=astD;locus_tag=b1746;gene_synonym=ECK1744;gene_synonym=JW5282;gene_synonym=ydjU;ec_number=1.2.1.-;function=enzyme%3B Not classified;note=GO_process: GO:0009063 - cellular amino acid catabolic process;codon_start=1;transl_table=11;product=succinylglutamic semialdehyde dehydrogenase;protein_id=AAC74816.1;db_xref=GI:1788042;db_xref=ASAP:ABE-0005820;db_xref=UniProtKB/Swiss-Prot:P76217;db_xref=EcoGene:EG13997 EMBL gene 1829731 1830765 . - . ID=.3813;gene=astA;locus_tag=b1747;gene_synonym=ECK1745;gene_synonym=JW1736;gene_synonym=ydjV;db_xref=EcoGene:EG13998 EMBL CDS 1829731 1830765 . - 0 ID=.3814;gene=astA;locus_tag=b1747;gene_synonym=ECK1745;gene_synonym=JW1736;gene_synonym=ydjV;ec_number=2.3.1.109;function=enzyme%3B Not classified;note=GO_process: GO:0009063 - cellular amino acid catabolic process;codon_start=1;transl_table=11;product=arginine succinyltransferase;protein_id=AAC74817.1;db_xref=GI:1788043;db_xref=ASAP:ABE-0005822;db_xref=UniProtKB/Swiss-Prot:P0AE37;db_xref=EcoGene:EG13998 EMBL gene 1830762 1831982 . - . ID=.3815;gene=astC;locus_tag=b1748;gene_synonym=argM;gene_synonym=cstC;gene_synonym=ECK1746;gene_synonym=JW1737;gene_synonym=ydjW;db_xref=EcoGene:EG13999 EMBL CDS 1830762 1831982 . - 0 ID=.3816;gene=astC;locus_tag=b1748;gene_synonym=argM;gene_synonym=cstC;gene_synonym=ECK1746;gene_synonym=JW1737;gene_synonym=ydjW;ec_number=2.6.1.11;ec_number=2.6.1.17;function=enzyme%3B Amino acid biosynthesis: Arginine;note=acetylornithine delta-aminotransferase%3B GO_process: GO:0009063 - cellular amino acid catabolic process;codon_start=1;transl_table=11;product=succinylornithine transaminase%2C PLP-dependent;protein_id=AAC74818.1;db_xref=GI:1788044;db_xref=ASAP:ABE-0005824;db_xref=UniProtKB/Swiss-Prot:P77581;db_xref=EcoGene:EG13999 EMBL gene 1832428 1833234 . + . ID=.3817;gene=xthA;locus_tag=b1749;gene_synonym=ECK1747;gene_synonym=JW1738;gene_synonym=xth;db_xref=EcoGene:EG11073 EMBL CDS 1832428 1833234 . + 0 ID=.3818;gene=xthA;locus_tag=b1749;gene_synonym=ECK1747;gene_synonym=JW1738;gene_synonym=xth;ec_number=3.1.11.2;function=enzyme%3B Degradation of DNA;note=GO_process: GO:0006308 - DNA catabolic process%3B GO_process: GO:0009314 - response to radiation;codon_start=1;transl_table=11;product=exonuclease III;protein_id=AAC74819.1;db_xref=GI:1788046;db_xref=ASAP:ABE-0005829;db_xref=UniProtKB/Swiss-Prot:P09030;db_xref=EcoGene:EG11073 EMBL gene 1833401 1834111 . + . ID=.3819;gene=ydjX;locus_tag=b1750;gene_synonym=ECK1748;gene_synonym=JW1739;db_xref=EcoGene:EG14000 EMBL CDS 1833401 1834111 . + 0 ID=.3820;gene=ydjX;locus_tag=b1750;gene_synonym=ECK1748;gene_synonym=JW1739;codon_start=1;transl_table=11;product=TVP38/TMEM64 family inner membrane protein;protein_id=AAC74820.2;db_xref=GI:87081964;db_xref=ASAP:ABE-0005832;db_xref=UniProtKB/Swiss-Prot:P76219;db_xref=EcoGene:EG14000 EMBL gene 1834116 1834793 . + . ID=.3821;gene=ydjY;locus_tag=b1751;gene_synonym=ECK1749;gene_synonym=JW5283;db_xref=EcoGene:EG14001 EMBL CDS 1834116 1834793 . + 0 ID=.3822;gene=ydjY;locus_tag=b1751;gene_synonym=ECK1749;gene_synonym=JW5283;codon_start=1;transl_table=11;product=putative ferrodoxin-like lipoprotein;protein_id=AAC74821.2;db_xref=GI:87081965;db_xref=ASAP:ABE-0005834;db_xref=UniProtKB/Swiss-Prot:P76220;db_xref=EcoGene:EG14001 EMBL gene 1834808 1835515 . + . ID=.3823;gene=ydjZ;locus_tag=b1752;gene_synonym=ECK1750;gene_synonym=JW1741;db_xref=EcoGene:EG14002 EMBL CDS 1834808 1835515 . + 0 ID=.3824;gene=ydjZ;locus_tag=b1752;gene_synonym=ECK1750;gene_synonym=JW1741;codon_start=1;transl_table=11;product=TVP38/TMEM64 family inner membrane protein;protein_id=AAC74822.1;db_xref=GI:1788049;db_xref=ASAP:ABE-0005837;db_xref=UniProtKB/Swiss-Prot:P76221;db_xref=EcoGene:EG14002 EMBL gene 1835515 1836063 . + . ID=.3825;gene=ynjA;locus_tag=b1753;gene_synonym=ECK1751;gene_synonym=JW1742;db_xref=EcoGene:EG14003 EMBL CDS 1835515 1836063 . + 0 ID=.3826;gene=ynjA;locus_tag=b1753;gene_synonym=ECK1751;gene_synonym=JW1742;codon_start=1;transl_table=11;product=carboxymuconolactone decarboxylase family protein;protein_id=AAC74823.1;db_xref=GI:1788050;db_xref=ASAP:ABE-0005839;db_xref=UniProtKB/Swiss-Prot:P76222;db_xref=EcoGene:EG14003 EMBL gene 1836073 1837239 . + . ID=.3827;gene=ynjB;locus_tag=b1754;gene_synonym=ECK1752;gene_synonym=JW5284;db_xref=EcoGene:EG14004 EMBL CDS 1836073 1837239 . + 0 ID=.3828;gene=ynjB;locus_tag=b1754;gene_synonym=ECK1752;gene_synonym=JW5284;codon_start=1;transl_table=11;product=putative ABC transporter periplasmic binding protein;protein_id=AAC74824.2;db_xref=GI:87081966;db_xref=ASAP:ABE-0005841;db_xref=UniProtKB/Swiss-Prot:P76223;db_xref=EcoGene:EG14004 EMBL gene 1837212 1838747 . + . ID=.3829;gene=ynjC;locus_tag=b1755;gene_synonym=ECK1753;gene_synonym=JW5285;db_xref=EcoGene:EG14005 EMBL CDS 1837212 1838747 . + 0 ID=.3830;gene=ynjC;locus_tag=b1755;gene_synonym=ECK1753;gene_synonym=JW5285;function=putative transport%3B Not classified;note=putative transport system permease protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative ABC transporter permease;protein_id=AAC74825.2;db_xref=GI:145693149;db_xref=ASAP:ABE-0005843;db_xref=UniProtKB/Swiss-Prot:P76224;db_xref=EcoGene:EG14005 EMBL gene 1838747 1839400 . + . ID=.3831;gene=ynjD;locus_tag=b1756;gene_synonym=ECK1754;gene_synonym=JW5286;db_xref=EcoGene:EG14006 EMBL CDS 1838747 1839400 . + 0 ID=.3832;gene=ynjD;locus_tag=b1756;gene_synonym=ECK1754;gene_synonym=JW5286;function=putative transport%3B Not classified;note=putative ATP-binding component of a transport system%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=putative ABC transporter ATPase;protein_id=AAC74826.1;db_xref=GI:1788053;db_xref=ASAP:ABE-0005845;db_xref=UniProtKB/Swiss-Prot:P76909;db_xref=EcoGene:EG14006 EMBL gene 1839467 1840774 . + . ID=.3833;gene=ynjE;locus_tag=b1757;gene_synonym=ECK1755;gene_synonym=JW5287;db_xref=EcoGene:EG14007 EMBL CDS 1839467 1840774 . + 0 ID=.3834;gene=ynjE;locus_tag=b1757;gene_synonym=ECK1755;gene_synonym=JW5287;function=putative enzyme%3B Central intermediary metabolism: Sulfur metabolism;note=putative thiosulfate sulfur transferase%3B GO_process: GO:0006790 - sulfur metabolic process;codon_start=1;transl_table=11;product=molybdopterin synthase sulfurtransferase;protein_id=AAC74827.2;db_xref=GI:87081967;db_xref=ASAP:ABE-0005848;db_xref=UniProtKB/Swiss-Prot:P78067;db_xref=EcoGene:EG14007 EMBL gene 1840783 1841403 . - . ID=.3835;gene=ynjF;locus_tag=b1758;gene_synonym=ECK1756;gene_synonym=JW1747;db_xref=EcoGene:EG14008 EMBL CDS 1840783 1841403 . - 0 ID=.3836;gene=ynjF;locus_tag=b1758;gene_synonym=ECK1756;gene_synonym=JW1747;function=putative enzyme%3B Not classified;note=putative cytochrome oxidase;codon_start=1;transl_table=11;product=CDP-alcohol phosphatidyltransferase family inner membrane protein;protein_id=AAC74828.2;db_xref=GI:87081968;db_xref=ASAP:ABE-0005850;db_xref=UniProtKB/Swiss-Prot:P76226;db_xref=EcoGene:EG14008 EMBL gene 1841490 1841897 . + . ID=.3837;gene=nudG;locus_tag=b1759;gene_synonym=ECK1757;gene_synonym=JW1748;gene_synonym=orf135;gene_synonym=ynjG;db_xref=EcoGene:EG14009 EMBL CDS 1841490 1841897 . + 0 ID=.3838;gene=nudG;locus_tag=b1759;gene_synonym=ECK1757;gene_synonym=JW1748;gene_synonym=orf135;gene_synonym=ynjG;ec_number=3.6.1.-;note=5-hydroxy-CTP pyrophosphohydrolase;codon_start=1;transl_table=11;product=CTP pyrophosphohydrolase%3B also hydrolyzes 2-hydroxy-dATP%2C 8-hydroxy-dGTP%2C 5-hydroxy-CTP%2C dCTP and 5-methyl-dCTP;protein_id=AAC74829.1;db_xref=GI:1788056;db_xref=ASAP:ABE-0005855;db_xref=UniProtKB/Swiss-Prot:P77788;db_xref=EcoGene:EG14009 EMBL gene 1841863 1842135 . - . ID=.3839;gene=ynjH;locus_tag=b1760;gene_synonym=ECK1758;gene_synonym=JW1749;db_xref=EcoGene:EG14010 EMBL CDS 1841863 1842135 . - 0 ID=.3840;gene=ynjH;locus_tag=b1760;gene_synonym=ECK1758;gene_synonym=JW1749;codon_start=1;transl_table=11;product=DUF1496 family protein;protein_id=AAC74830.1;db_xref=GI:1788057;db_xref=ASAP:ABE-0005858;db_xref=UniProtKB/Swiss-Prot:P76227;db_xref=EcoGene:EG14010 EMBL gene 1842371 1843714 . + . ID=.3841;gene=gdhA;locus_tag=b1761;gene_synonym=ECK1759;gene_synonym=JW1750;db_xref=EcoGene:EG10372 EMBL CDS 1842371 1843714 . + 0 ID=.3842;gene=gdhA;locus_tag=b1761;gene_synonym=ECK1759;gene_synonym=JW1750;ec_number=1.4.1.4;function=enzyme%3B Amino acid biosynthesis: Glutamate;experiment=N-terminus verified by Edman degradation: PMID 6308576%2C9298646;note=NADP-specific glutamate dehydrogenase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006537 - glutamate biosynthetic process;codon_start=1;transl_table=11;product=glutamate dehydrogenase%2C NADP-specific;protein_id=AAC74831.1;db_xref=GI:1788059;db_xref=ASAP:ABE-0005865;db_xref=UniProtKB/Swiss-Prot:P00370;db_xref=EcoGene:EG10372 EMBL repeat_region 1843724 1843816 . + . ID=.3843;note=REP131 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 1843831 1844871 . - . ID=.3844;gene=ynjI;locus_tag=b1762;gene_synonym=ECK1760;gene_synonym=JW5288;db_xref=EcoGene:EG14011 EMBL CDS 1843831 1844871 . - 0 ID=.3845;gene=ynjI;locus_tag=b1762;gene_synonym=ECK1760;gene_synonym=JW5288;codon_start=1;transl_table=11;product=inner membrane protein;protein_id=AAC74832.2;db_xref=GI:87081969;db_xref=ASAP:ABE-0005867;db_xref=UniProtKB/Swiss-Prot:P76228;db_xref=EcoGene:EG14011 EMBL gene 1844999 1846960 . - . ID=.3846;gene=topB;locus_tag=b1763;gene_synonym=ECK1761;gene_synonym=JW1752;gene_synonym=mutR;db_xref=EcoGene:EG11014 EMBL CDS 1844999 1846960 . - 0 ID=.3847;gene=topB;locus_tag=b1763;gene_synonym=ECK1761;gene_synonym=JW1752;gene_synonym=mutR;ec_number=5.99.1.2;function=enzyme%3B DNA - replication%2C repair%2C restriction/modification;experiment=N-terminus verified by Edman degradation: PMID 2553698;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006261 - DNA-dependent DNA replication%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=DNA topoisomerase III;protein_id=AAC74833.1;db_xref=GI:1788061;db_xref=ASAP:ABE-0005869;db_xref=UniProtKB/Swiss-Prot:P14294;db_xref=EcoGene:EG11014 EMBL gene 1846965 1848008 . - . ID=.3848;gene=selD;locus_tag=b1764;gene_synonym=ECK1762;gene_synonym=fdhB;gene_synonym=JW1753;db_xref=EcoGene:EG10943 EMBL CDS 1846965 1848008 . - 0 ID=.3849;gene=selD;locus_tag=b1764;gene_synonym=ECK1762;gene_synonym=fdhB;gene_synonym=JW1753;ec_number=2.7.9.3;function=enzyme%3B Aminoacyl tRNA synthetases%2C tRNA modification;note=selenophosphate synthase%2C H(2)Se added to acrylyl-tRNA%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006418 - tRNA aminoacylation for protein translation;codon_start=1;transl_table=11;product=selenophosphate synthase;protein_id=AAC74834.1;db_xref=GI:1788062;db_xref=ASAP:ABE-0005872;db_xref=UniProtKB/Swiss-Prot:P16456;db_xref=EcoGene:EG10943 EMBL gene 1848125 1848676 . - . ID=.3850;gene=ydjA;locus_tag=b1765;gene_synonym=ECK1763;gene_synonym=JW1754;db_xref=EcoGene:EG11134 EMBL CDS 1848125 1848676 . - 0 ID=.3851;gene=ydjA;locus_tag=b1765;gene_synonym=ECK1763;gene_synonym=JW1754;codon_start=1;transl_table=11;product=putative oxidoreductase;protein_id=AAC74835.1;db_xref=GI:1788063;db_xref=ASAP:ABE-0005875;db_xref=UniProtKB/Swiss-Prot:P0ACY1;db_xref=EcoGene:EG11134 EMBL gene 1848837 1850693 . + . ID=.3852;gene=sppA;locus_tag=b1766;gene_synonym=ECK1764;gene_synonym=JW1755;db_xref=EcoGene:EG10968 EMBL CDS 1848837 1850693 . + 0 ID=.3853;gene=sppA;locus_tag=b1766;gene_synonym=ECK1764;gene_synonym=JW1755;ec_number=3.4.-.-;function=enzyme%3B Degradation of proteins%2C peptides%2C glyco;note=protease IV%2C a signal peptide peptidase;codon_start=1;transl_table=11;product=protease IV (signal peptide peptidase);protein_id=AAC74836.1;db_xref=GI:1788064;db_xref=ASAP:ABE-0005880;db_xref=UniProtKB/Swiss-Prot:P08395;db_xref=EcoGene:EG10968 EMBL gene 1850860 1851876 . + . ID=.3854;gene=ansA;locus_tag=b1767;gene_synonym=ECK1765;gene_synonym=JW1756;db_xref=EcoGene:EG10045 EMBL CDS 1850860 1851876 . + 0 ID=.3855;gene=ansA;locus_tag=b1767;gene_synonym=ECK1765;gene_synonym=JW1756;ec_number=3.5.1.1;function=enzyme%3B Degradation of small molecules: Amino acids;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009063 - cellular amino acid catabolic process;codon_start=1;transl_table=11;product=cytoplasmic L-asparaginase 1;protein_id=AAC74837.1;db_xref=GI:1788065;db_xref=ASAP:ABE-0005886;db_xref=UniProtKB/Swiss-Prot:P0A962;db_xref=EcoGene:EG10045 EMBL gene 1851887 1852528 . + . ID=.3856;gene=pncA;locus_tag=b1768;gene_synonym=ECK1766;gene_synonym=JW1757;gene_synonym=nam;gene_synonym=ydjB;db_xref=EcoGene:EG11135 EMBL CDS 1851887 1852528 . + 0 ID=.3857;gene=pncA;locus_tag=b1768;gene_synonym=ECK1766;gene_synonym=JW1757;gene_synonym=nam;gene_synonym=ydjB;ec_number=3.5.1.-;ec_number=3.5.1.19;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009435 - NAD biosynthetic process;codon_start=1;transl_table=11;product=nicotinamidase/pyrazinamidase;protein_id=AAC74838.2;db_xref=GI:87081970;db_xref=ASAP:ABE-0005891;db_xref=UniProtKB/Swiss-Prot:P21369;db_xref=EcoGene:EG11135 EMBL repeat_region 1852562 1852597 . + . ID=.3858;note=REP132 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 1852621 1853979 . - . ID=.3859;gene=ydjE;locus_tag=b1769;gene_synonym=ECK1767;gene_synonym=JW1758;db_xref=EcoGene:EG12369 EMBL CDS 1852621 1853979 . - 0 ID=.3860;gene=ydjE;locus_tag=b1769;gene_synonym=ECK1767;gene_synonym=JW1758;function=putative transport%3B Not classified;note=putative transport protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative MFS sugar transporter%2C membrane protein;protein_id=AAC74839.1;db_xref=GI:1788068;db_xref=ASAP:ABE-0005894;db_xref=UniProtKB/Swiss-Prot:P38055;db_xref=EcoGene:EG12369 EMBL gene 1854096 1854854 . - . ID=.3861;gene=ydjF;locus_tag=b1770;gene_synonym=ECK1768;gene_synonym=JW1759;db_xref=EcoGene:EG13482 EMBL CDS 1854096 1854854 . - 0 ID=.3862;gene=ydjF;locus_tag=b1770;gene_synonym=ECK1768;gene_synonym=JW1759;function=putative regulator%3B Not classified;note=putative DEOR-type transcriptional regulator%3B GO_process: GO:0006350 - transcription%3B GO_process: GO:0006355 - regulation of transcription%2C DNA-dependent;codon_start=1;transl_table=11;product=putative DNA-binding transcriptional regulator;protein_id=AAC74840.1;db_xref=GI:1788069;db_xref=ASAP:ABE-0005897;db_xref=UniProtKB/Swiss-Prot:P77721;db_xref=EcoGene:EG13482 EMBL gene 1854991 1855971 . - . ID=.3863;gene=ydjG;locus_tag=b1771;gene_synonym=ECK1769;gene_synonym=JW1760;db_xref=EcoGene:EG13483 EMBL CDS 1854991 1855971 . - 0 ID=.3864;gene=ydjG;locus_tag=b1771;gene_synonym=ECK1769;gene_synonym=JW1760;codon_start=1;transl_table=11;product=methylglyoxal reductase%2C NADH-dependent;protein_id=AAC74841.1;db_xref=GI:1788070;db_xref=ASAP:ABE-0005901;db_xref=UniProtKB/Swiss-Prot:P77256;db_xref=EcoGene:EG13483 EMBL gene 1855981 1856928 . - . ID=.3865;gene=ydjH;locus_tag=b1772;gene_synonym=ECK1770;gene_synonym=JW5289;db_xref=EcoGene:EG13484 EMBL CDS 1855981 1856928 . - 0 ID=.3866;gene=ydjH;locus_tag=b1772;gene_synonym=ECK1770;gene_synonym=JW5289;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=putative kinase;protein_id=AAC74842.2;db_xref=GI:87081971;db_xref=ASAP:ABE-0005903;db_xref=UniProtKB/Swiss-Prot:P77493;db_xref=EcoGene:EG13484 EMBL gene 1856933 1857769 . - . ID=.3867;gene=ydjI;locus_tag=b1773;gene_synonym=ECK1771;gene_synonym=JW1762;db_xref=EcoGene:EG13485 EMBL CDS 1856933 1857769 . - 0 ID=.3868;gene=ydjI;locus_tag=b1773;gene_synonym=ECK1771;gene_synonym=JW1762;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=putative aldolase;protein_id=AAC74843.1;db_xref=GI:1788072;db_xref=ASAP:ABE-0005906;db_xref=UniProtKB/Swiss-Prot:P77704;db_xref=EcoGene:EG13485 EMBL gene 1857790 1858833 . - . ID=.3869;gene=ydjJ;locus_tag=b1774;gene_synonym=ECK1772;gene_synonym=JW1763;db_xref=EcoGene:EG13486 EMBL CDS 1857790 1858833 . - 0 ID=.3870;gene=ydjJ;locus_tag=b1774;gene_synonym=ECK1772;gene_synonym=JW1763;function=putative enzyme%3B Not classified;note=putative oxidoreductase;codon_start=1;transl_table=11;product=putative Zn-dependent NAD(P)-binding oxidoreductase;protein_id=AAC74844.1;db_xref=GI:1788073;db_xref=ASAP:ABE-0005908;db_xref=UniProtKB/Swiss-Prot:P77280;db_xref=EcoGene:EG13486 EMBL gene 1858850 1860229 . - . ID=.3871;gene=ydjK;locus_tag=b1775;gene_synonym=ECK1773;gene_synonym=JW5290;db_xref=EcoGene:EG13487 EMBL CDS 1858850 1860229 . - 0 ID=.3872;gene=ydjK;locus_tag=b1775;gene_synonym=ECK1773;gene_synonym=JW5290;function=putative transport%3B Not classified;note=putative transport protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative MFS sugar transporter%2C membrane protein;protein_id=AAC74845.1;db_xref=GI:1788074;db_xref=ASAP:ABE-0005910;db_xref=UniProtKB/Swiss-Prot:P76230;db_xref=EcoGene:EG13487 EMBL gene 1860256 1861332 . - . ID=.3873;gene=ydjL;locus_tag=b1776;gene_synonym=ECK1774;gene_synonym=JW1765;db_xref=EcoGene:EG13488 EMBL CDS 1860256 1861332 . - 0 ID=.3874;gene=ydjL;locus_tag=b1776;gene_synonym=ECK1774;gene_synonym=JW1765;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=putative Zn-dependent NAD(P)-binding oxidoreductase;protein_id=AAC74846.1;db_xref=GI:1788075;db_xref=ASAP:ABE-0005912;db_xref=UniProtKB/Swiss-Prot:P77539;db_xref=EcoGene:EG13488 EMBL gene 1861702 1861974 . - . ID=.3875;gene=yeaC;locus_tag=b1777;gene_synonym=ECK1775;gene_synonym=JW1766;db_xref=EcoGene:EG13489 EMBL CDS 1861702 1861974 . - 0 ID=.3876;gene=yeaC;locus_tag=b1777;gene_synonym=ECK1775;gene_synonym=JW1766;codon_start=1;transl_table=11;product=DUF1315 family protein;protein_id=AAC74847.2;db_xref=GI:87081972;db_xref=ASAP:ABE-0005914;db_xref=UniProtKB/Swiss-Prot:P76231;db_xref=EcoGene:EG13489 EMBL gene 1862016 1862429 . - . ID=.3877;gene=msrB;locus_tag=b1778;gene_synonym=ECK1776;gene_synonym=JW1767;gene_synonym=yeaA;db_xref=EcoGene:EG12394 EMBL CDS 1862016 1862429 . - 0 ID=.3878;gene=msrB;locus_tag=b1778;gene_synonym=ECK1776;gene_synonym=JW1767;gene_synonym=yeaA;ec_number=1.8.4.12;codon_start=1;transl_table=11;product=methionine sulfoxide reductase B;protein_id=AAC74848.1;db_xref=GI:1788077;db_xref=ASAP:ABE-0005916;db_xref=UniProtKB/Swiss-Prot:P0A746;db_xref=EcoGene:EG12394 EMBL gene 1862771 1863766 . + . ID=.3879;gene=gapA;locus_tag=b1779;gene_synonym=ECK1777;gene_synonym=JW1768;db_xref=EcoGene:EG10367 EMBL CDS 1862771 1863766 . + 0 ID=.3880;gene=gapA;locus_tag=b1779;gene_synonym=ECK1777;gene_synonym=JW1768;ec_number=1.2.1.12;function=enzyme%3B Energy metabolism%2C carbon: Glycolysis;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006096 - glycolysis%3B GO_process: GO:0008615 - pyridoxine biosynthetic process%3B GO_process: GO:0006094 - gluconeogenesis;codon_start=1;transl_table=11;product=glyceraldehyde-3-phosphate dehydrogenase A;protein_id=AAC74849.1;db_xref=GI:1788079;db_xref=ASAP:ABE-0005920;db_xref=UniProtKB/Swiss-Prot:P0A9B2;db_xref=EcoGene:EG10367 EMBL gene 1863850 1864734 . + . ID=.3881;gene=yeaD;locus_tag=b1780;gene_synonym=ECK1778;gene_synonym=JW1769;gene_synonym=yzzQ;db_xref=EcoGene:EG12679 EMBL CDS 1863850 1864734 . + 0 ID=.3882;gene=yeaD;locus_tag=b1780;gene_synonym=ECK1778;gene_synonym=JW1769;gene_synonym=yzzQ;function=putative enzyme%3B Central intermediary metabolism: Pool%2C multipurpose conversions;experiment=N-terminus verified by Edman degradation: PMID 9298646;codon_start=1;transl_table=11;product=D-hexose-6-phosphate epimerase-like protein;protein_id=AAC74850.2;db_xref=GI:87081973;db_xref=ASAP:ABE-0005923;db_xref=UniProtKB/Swiss-Prot:P39173;db_xref=EcoGene:EG12679 EMBL repeat_region 1864753 1864773 . + . ID=.3883;note=REP133 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 1864782 1865636 . - . ID=.3884;gene=yeaE;locus_tag=b1781;gene_synonym=ECK1779;gene_synonym=JW1770;db_xref=EcoGene:EG13491 EMBL CDS 1864782 1865636 . - 0 ID=.3885;gene=yeaE;locus_tag=b1781;gene_synonym=ECK1779;gene_synonym=JW1770;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=putative an aldehyde reductase;codon_start=1;transl_table=11;product=aldo-keto reductase%2C methylglyoxal to acetol%2C NADPH-dependent;protein_id=AAC74851.1;db_xref=GI:1788081;db_xref=ASAP:ABE-0005925;db_xref=UniProtKB/Swiss-Prot:P76234;db_xref=EcoGene:EG13491 EMBL gene 1865726 1866472 . - . ID=.3886;gene=mipA;locus_tag=b1782;gene_synonym=ECK1780;gene_synonym=JW1771;gene_synonym=yeaF;db_xref=EcoGene:EG13492 EMBL CDS 1865726 1866472 . - 0 ID=.3887;gene=mipA;locus_tag=b1782;gene_synonym=ECK1780;gene_synonym=JW1771;gene_synonym=yeaF;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane%3B GO_process: GO:0009252 - peptidoglycan biosynthetic process;codon_start=1;transl_table=11;product=scaffolding protein for murein synthesizing machinery;protein_id=AAC74852.1;db_xref=GI:1788082;db_xref=ASAP:ABE-0005928;db_xref=UniProtKB/Swiss-Prot:P0A908;db_xref=EcoGene:EG13492 EMBL gene 1866908 1868842 . + . ID=.3888;gene=yeaG;locus_tag=b1783;gene_synonym=ECK1781;gene_synonym=JW1772;db_xref=EcoGene:EG13493 EMBL CDS 1866908 1868842 . + 0 ID=.3889;gene=yeaG;locus_tag=b1783;gene_synonym=ECK1781;gene_synonym=JW1772;codon_start=1;transl_table=11;product=protein kinase%2C endogenous substrate unidentified%3B autokinase;protein_id=AAC74853.1;db_xref=GI:1788083;db_xref=ASAP:ABE-0005935;db_xref=UniProtKB/Swiss-Prot:P0ACY3;db_xref=EcoGene:EG13493 EMBL repeat_region 1868892 1868930 . + . ID=.3890;note=REP134 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 1868955 1870238 . + . ID=.3891;gene=yeaH;locus_tag=b1784;gene_synonym=ECK1782;gene_synonym=JW1773;db_xref=EcoGene:EG13494 EMBL CDS 1868955 1870238 . + 0 ID=.3892;gene=yeaH;locus_tag=b1784;gene_synonym=ECK1782;gene_synonym=JW1773;codon_start=1;transl_table=11;product=UPF0229 family protein;protein_id=AAC74854.1;db_xref=GI:1788084;db_xref=ASAP:ABE-0005938;db_xref=UniProtKB/Swiss-Prot:P76235;db_xref=EcoGene:EG13494 EMBL gene 1870385 1871860 . + . ID=.3893;gene=yeaI;locus_tag=b1785;gene_synonym=ECK1783;gene_synonym=JW1774;db_xref=EcoGene:EG13495 EMBL CDS 1870385 1871860 . + 0 ID=.3894;gene=yeaI;locus_tag=b1785;gene_synonym=ECK1783;gene_synonym=JW1774;codon_start=1;transl_table=11;product=putative membrane-anchored diguanylate cyclase;protein_id=AAC74855.1;db_xref=GI:1788085;db_xref=ASAP:ABE-0005941;db_xref=UniProtKB/Swiss-Prot:P76236;db_xref=EcoGene:EG13495 EMBL gene 1872041 1873531 . + . ID=.3895;gene=yeaJ;locus_tag=b1786;gene_synonym=ECK1784;gene_synonym=JW5291;db_xref=EcoGene:EG13496 EMBL CDS 1872041 1873531 . + 0 ID=.3896;gene=yeaJ;locus_tag=b1786;gene_synonym=ECK1784;gene_synonym=JW5291;codon_start=1;transl_table=11;product=putative diguanylate cyclase;protein_id=AAC74856.2;db_xref=GI:87081974;db_xref=ASAP:ABE-0005943;db_xref=UniProtKB/Swiss-Prot:P76237;db_xref=EcoGene:EG13496 EMBL gene 1873574 1874077 . + . ID=.3897;gene=yeaK;locus_tag=b1787;gene_synonym=ECK1785;gene_synonym=JW1776;db_xref=EcoGene:EG13497 EMBL CDS 1873574 1874077 . + 0 ID=.3898;gene=yeaK;locus_tag=b1787;gene_synonym=ECK1785;gene_synonym=JW1776;codon_start=1;transl_table=11;product=aminoacyl-tRNA editing domain protein;protein_id=AAC74857.1;db_xref=GI:1788087;db_xref=ASAP:ABE-0005945;db_xref=UniProtKB/Swiss-Prot:P64483;db_xref=EcoGene:EG13497 EMBL gene 1874078 1874182 . - . ID=.3899;gene=yoaI;locus_tag=b1788;gene_synonym=ECK4472;db_xref=EcoGene:EG14417 EMBL CDS 1874078 1874182 . - 0 ID=.3900;gene=yoaI;locus_tag=b1788;gene_synonym=ECK4472;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC74858.2;db_xref=GI:87081975;db_xref=ASAP:ABE-0005947;db_xref=UniProtKB/Swiss-Prot:P76239;db_xref=EcoGene:EG14417 EMBL gene 1874352 1874798 . + . ID=.3901;gene=yeaL;locus_tag=b1789;gene_synonym=ECK1787;gene_synonym=JW1778;db_xref=EcoGene:EG13498 EMBL CDS 1874352 1874798 . + 0 ID=.3902;gene=yeaL;locus_tag=b1789;gene_synonym=ECK1787;gene_synonym=JW1778;note=GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=UPF0756 family putative inner membrane protein;protein_id=AAC74859.1;db_xref=GI:1788090;db_xref=ASAP:ABE-0005954;db_xref=UniProtKB/Swiss-Prot:P0ACY6;db_xref=EcoGene:EG13498 EMBL gene 1874755 1875576 . - . ID=.3903;gene=yeaM;locus_tag=b1790;gene_synonym=ECK1788;gene_synonym=JW1779;db_xref=EcoGene:EG13499 EMBL CDS 1874755 1875576 . - 0 ID=.3904;gene=yeaM;locus_tag=b1790;gene_synonym=ECK1788;gene_synonym=JW1779;function=putative regulator%3B Not classified;note=putative ARAC-type regulatory protein%3B GO_process: GO:0006350 - transcription%3B GO_process: GO:0006355 - regulation of transcription%2C DNA-dependent;codon_start=1;transl_table=11;product=putative DNA-binding transcriptional regulator;protein_id=AAC74860.1;db_xref=GI:1788091;db_xref=ASAP:ABE-0005956;db_xref=UniProtKB/Swiss-Prot:P76241;db_xref=EcoGene:EG13499 EMBL gene 1875673 1876854 . + . ID=.3905;gene=yeaN;locus_tag=b1791;gene_synonym=ECK1789;gene_synonym=JW1780;db_xref=EcoGene:EG13500 EMBL CDS 1875673 1876854 . + 0 ID=.3906;gene=yeaN;locus_tag=b1791;gene_synonym=ECK1789;gene_synonym=JW1780;function=putative transport%3B Not classified;note=putative amino acid/amine transport protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0042886 - amide transport;codon_start=1;transl_table=11;product=putative MFS transporter%2C inner membrane protein;protein_id=AAC74861.1;db_xref=GI:1788092;db_xref=ASAP:ABE-0005962;db_xref=UniProtKB/Swiss-Prot:P76242;db_xref=EcoGene:EG13500 EMBL gene 1876909 1877256 . + . ID=.3907;gene=yeaO;locus_tag=b1792;gene_synonym=ECK1790;gene_synonym=JW1781;db_xref=EcoGene:EG13501 EMBL CDS 1876909 1877256 . + 0 ID=.3908;gene=yeaO;locus_tag=b1792;gene_synonym=ECK1790;gene_synonym=JW1781;codon_start=1;transl_table=11;product=DUF488 family protein;protein_id=AAC74862.2;db_xref=GI:87081976;db_xref=ASAP:ABE-0005964;db_xref=UniProtKB/Swiss-Prot:P76243;db_xref=EcoGene:EG13501 EMBL gene 1877278 1877532 . - . ID=.3909;gene=yoaF;locus_tag=b1793;gene_synonym=ECK1791;gene_synonym=JW1782;db_xref=EcoGene:EG14304 EMBL CDS 1877278 1877532 . - 0 ID=.3910;gene=yoaF;locus_tag=b1793;gene_synonym=ECK1791;gene_synonym=JW1782;codon_start=1;transl_table=11;product=DUF333 family outer membrane lipoprotein;protein_id=AAC74863.1;db_xref=GI:1788094;db_xref=ASAP:ABE-0005966;db_xref=UniProtKB/Swiss-Prot:P64493;db_xref=EcoGene:EG14304 EMBL gene 1877715 1878740 . + . ID=.3911;gene=yeaP;locus_tag=b1794;gene_synonym=ECK1792;gene_synonym=JW5292;db_xref=EcoGene:EG13502 EMBL CDS 1877715 1878740 . + 0 ID=.3912;gene=yeaP;locus_tag=b1794;gene_synonym=ECK1792;gene_synonym=JW5292;codon_start=1;transl_table=11;product=diguanylate cyclase;protein_id=AAC74864.2;db_xref=GI:87081977;db_xref=ASAP:ABE-0005972;db_xref=UniProtKB/Swiss-Prot:P76245;db_xref=EcoGene:EG13502 EMBL gene 1878773 1878871 . + . ID=.3913;gene=yoaK;locus_tag=b4676;gene_synonym=ECK4491;db_xref=EcoGene:EG14481 EMBL CDS 1878773 1878871 . + 0 ID=.3914;gene=yoaK;locus_tag=b4676;gene_synonym=ECK4491;codon_start=1;transl_table=11;product=inner membrane-associated protein;protein_id=ACO59994.1;db_xref=GI:226510949;db_xref=UniProtKB/Swiss-Prot:C1P602;db_xref=EcoGene:EG14481 EMBL gene 1878874 1878948 . + . ID=.3915;gene=yoaJ;locus_tag=b4675;gene_synonym=ECK4490;db_xref=EcoGene:EG14480 EMBL CDS 1878874 1878948 . + 0 ID=.3916;gene=yoaJ;locus_tag=b4675;gene_synonym=ECK4490;codon_start=1;transl_table=11;product=inner membrane-associated protein;protein_id=ACO59995.1;db_xref=GI:226510950;db_xref=UniProtKB/Swiss-Prot:C1P603;db_xref=EcoGene:EG14480 EMBL gene 1879007 1879255 . - . ID=.3917;gene=yeaQ;locus_tag=b1795;gene_synonym=ECK1793;gene_synonym=JW1784;db_xref=EcoGene:EG13503 EMBL CDS 1879007 1879255 . - 0 ID=.3918;gene=yeaQ;locus_tag=b1795;gene_synonym=ECK1793;gene_synonym=JW1784;codon_start=1;transl_table=11;product=UPF0410 family protein;protein_id=AAC74865.1;db_xref=GI:1788096;db_xref=ASAP:ABE-0005974;db_xref=UniProtKB/Swiss-Prot:P64485;db_xref=EcoGene:EG13503 EMBL gene 1879403 1879585 . - . ID=.3919;gene=yoaG;locus_tag=b1796;gene_synonym=ECK1794;gene_synonym=JW1785;db_xref=EcoGene:EG14305 EMBL CDS 1879403 1879585 . - 0 ID=.3920;gene=yoaG;locus_tag=b1796;gene_synonym=ECK1794;gene_synonym=JW1785;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC74866.1;db_xref=GI:1788097;db_xref=ASAP:ABE-0005976;db_xref=UniProtKB/Swiss-Prot:P64496;db_xref=EcoGene:EG14305 EMBL gene 1879589 1879948 . - . ID=.3921;gene=yeaR;locus_tag=b1797;gene_synonym=ECK1795;gene_synonym=JW1786;db_xref=EcoGene:EG13504 EMBL CDS 1879589 1879948 . - 0 ID=.3922;gene=yeaR;locus_tag=b1797;gene_synonym=ECK1795;gene_synonym=JW1786;note=GO_process: GO:0006805 - xenobiotic metabolic process;codon_start=1;transl_table=11;product=DUF1971 family protein%2C nitrate-inducible;protein_id=AAC74867.1;db_xref=GI:1788098;db_xref=ASAP:ABE-0005979;db_xref=UniProtKB/Swiss-Prot:P64488;db_xref=EcoGene:EG13504 EMBL gene 1880121 1880759 . - . ID=.3923;gene=leuE;locus_tag=b1798;gene_synonym=ECK1796;gene_synonym=JW1787;gene_synonym=yeaS;db_xref=EcoGene:EG13505 EMBL CDS 1880121 1880759 . - 0 ID=.3924;gene=leuE;locus_tag=b1798;gene_synonym=ECK1796;gene_synonym=JW1787;gene_synonym=yeaS;codon_start=1;transl_table=11;product=leucine efflux protein;protein_id=AAC74868.1;db_xref=GI:1788099;db_xref=ASAP:ABE-0005984;db_xref=UniProtKB/Swiss-Prot:P76249;db_xref=EcoGene:EG13505 EMBL gene 1880886 1881809 . - . ID=.3925;gene=dmlR;locus_tag=b1799;gene_synonym=ECK1797;gene_synonym=JW1788;gene_synonym=yeaT;db_xref=EcoGene:EG13506 EMBL CDS 1880886 1881809 . - 0 ID=.3926;gene=dmlR;locus_tag=b1799;gene_synonym=ECK1797;gene_synonym=JW1788;gene_synonym=yeaT;function=regulator%3B Not classified;note=putative transcriptional regulator LYSR-type%3B GO_function: GO:0016563 - transcription activator activity%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=transcriptional activator of dmlA;protein_id=AAC74869.2;db_xref=GI:87081978;db_xref=ASAP:ABE-0005987;db_xref=UniProtKB/Swiss-Prot:P76250;db_xref=EcoGene:EG13506 EMBL gene 1881912 1882997 . + . ID=.3927;gene=dmlA;locus_tag=b1800;gene_synonym=ECK1798;gene_synonym=JW1789;gene_synonym=yeaU;db_xref=EcoGene:EG13507 EMBL CDS 1881912 1882997 . + 0 ID=.3928;gene=dmlA;locus_tag=b1800;gene_synonym=ECK1798;gene_synonym=JW1789;gene_synonym=yeaU;function=enzyme%3B Not classified;note=putative tartrate dehydrogenase%3B GO_process: GO:0006113 - fermentation;codon_start=1;transl_table=11;product=D-malate oxidase%2C NAD-dependent%3B putative tartrate dehydrogenase;protein_id=AAC74870.1;db_xref=GI:1788101;db_xref=ASAP:ABE-0005991;db_xref=UniProtKB/Swiss-Prot:P76251;db_xref=EcoGene:EG13507 EMBL gene 1883188 1884633 . + . ID=.3929;gene=yeaV;locus_tag=b1801;gene_synonym=ECK1799;gene_synonym=JW5293;db_xref=EcoGene:EG13508 EMBL CDS 1883188 1884633 . + 0 ID=.3930;gene=yeaV;locus_tag=b1801;gene_synonym=ECK1799;gene_synonym=JW5293;function=putative transport%3B Not classified;note=putative transport protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative transporter;protein_id=AAC74871.1;db_xref=GI:1788102;db_xref=ASAP:ABE-0005995;db_xref=UniProtKB/Swiss-Prot:P0ABD1;db_xref=EcoGene:EG13508 EMBL gene 1884665 1885789 . + . ID=.3931;gene=yeaW;locus_tag=b1802;gene_synonym=ECK1800;gene_synonym=JW5294;db_xref=EcoGene:EG13509 EMBL CDS 1884665 1885789 . + 0 ID=.3932;gene=yeaW;locus_tag=b1802;gene_synonym=ECK1800;gene_synonym=JW5294;codon_start=1;transl_table=11;product=putative YeaWX dioxygenase alpha subunit%3B 2Fe-2S cluster;protein_id=AAC74872.1;db_xref=GI:1788103;db_xref=ASAP:ABE-0005997;db_xref=UniProtKB/Swiss-Prot:P0ABR7;db_xref=EcoGene:EG13509 EMBL gene 1885845 1886810 . + . ID=.3933;gene=yeaX;locus_tag=b1803;gene_synonym=ECK1801;gene_synonym=JW1792;db_xref=EcoGene:EG13510 EMBL CDS 1885845 1886810 . + 0 ID=.3934;gene=yeaX;locus_tag=b1803;gene_synonym=ECK1801;gene_synonym=JW1792;function=putative enzyme%3B Not classified;note=putative diogenase beta subunit;codon_start=1;transl_table=11;product=putative YeaWX dioxygenase beta subunit%2C reductase component;protein_id=AAC74873.1;db_xref=GI:1788104;db_xref=ASAP:ABE-0006000;db_xref=UniProtKB/Swiss-Prot:P76254;db_xref=EcoGene:EG13510 EMBL gene 1886864 1887991 . - . ID=.3935;gene=rnd;locus_tag=b1804;gene_synonym=ECK1802;gene_synonym=JW1793;db_xref=EcoGene:EG10858 EMBL CDS 1886864 1887991 . - 0 ID=.3936;gene=rnd;locus_tag=b1804;gene_synonym=ECK1802;gene_synonym=JW1793;ec_number=3.1.26.3;function=enzyme%3B Degradation of RNA;experiment=N-terminus verified by Edman degradation: PMID 3041371;note=RNase D%2C processes tRNA precursor%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006401 - RNA catabolic process%3B GO_process: GO:0009451 - RNA modification;codon_start=1;transl_table=11;product=ribonuclease D;protein_id=AAC74874.1;db_xref=GI:1788105;db_xref=ASAP:ABE-0006003;db_xref=UniProtKB/Swiss-Prot:P09155;db_xref=EcoGene:EG10858 EMBL gene 1888061 1889746 . - . ID=.3937;gene=fadD;locus_tag=b1805;gene_synonym=ECK1803;gene_synonym=JW1794;gene_synonym=oldD;db_xref=EcoGene:EG11530 EMBL CDS 1888061 1889746 . - 0 ID=.3938;gene=fadD;locus_tag=b1805;gene_synonym=ECK1803;gene_synonym=JW1794;gene_synonym=oldD;ec_number=6.2.1.3;function=enzyme%3B Degradation of small molecules: Fatty acids;experiment=N-terminus verified by Edman degradation: PMID 1460045;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_process: GO:0019395 - fatty acid oxidation%3B GO_process: GO:0008654 - phospholipid biosynthetic process;codon_start=1;transl_table=11;product=acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase);protein_id=AAC74875.1;db_xref=GI:1788107;db_xref=ASAP:ABE-0006005;db_xref=UniProtKB/Swiss-Prot:P69451;db_xref=EcoGene:EG11530 EMBL gene 1889951 1890532 . - . ID=.3939;gene=yeaY;locus_tag=b1806;gene_synonym=ECK1804;gene_synonym=JW1795;db_xref=EcoGene:EG13511 EMBL CDS 1889951 1890532 . - 0 ID=.3940;gene=yeaY;locus_tag=b1806;gene_synonym=ECK1804;gene_synonym=JW1795;function=membrane%3B Not classified;note=putative outer membrane protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=Slp family lipoprotein%2C RpoE-regulated;protein_id=AAC74876.1;db_xref=GI:1788108;db_xref=ASAP:ABE-0006011;db_xref=UniProtKB/Swiss-Prot:P0AA91;db_xref=EcoGene:EG13511 EMBL gene 1890572 1891267 . - . ID=.3941;gene=tsaB;locus_tag=b1807;gene_synonym=ECK1805;gene_synonym=JW1796;gene_synonym=rpf;gene_synonym=yeaZ;db_xref=EcoGene:EG13512 EMBL CDS 1890572 1891267 . - 0 ID=.3942;gene=tsaB;locus_tag=b1807;gene_synonym=ECK1805;gene_synonym=JW1796;gene_synonym=rpf;gene_synonym=yeaZ;function=enzyme%3B tRNA modification;codon_start=1;transl_table=11;product=tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein%3B binding partner and protease for TsaD;protein_id=AAC74877.1;db_xref=GI:1788109;db_xref=ASAP:ABE-0006013;db_xref=UniProtKB/Swiss-Prot:P76256;db_xref=EcoGene:EG13512 EMBL gene 1891325 1893235 . - . ID=.3943;gene=yoaA;locus_tag=b1808;gene_synonym=ECK1806;gene_synonym=JW1797;db_xref=EcoGene:EG13513 EMBL CDS 1891325 1893235 . - 0 ID=.3944;gene=yoaA;locus_tag=b1808;gene_synonym=ECK1806;gene_synonym=JW1797;function=putative enzyme%3B Not classified;note=putative enzyme%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=putative ATP-dependent helicase%2C DinG family;protein_id=AAC74878.1;db_xref=GI:1788110;db_xref=ASAP:ABE-0006016;db_xref=UniProtKB/Swiss-Prot:P76257;db_xref=EcoGene:EG13513 EMBL gene 1893367 1893711 . + . ID=.3945;gene=yoaB;locus_tag=b1809;gene_synonym=ECK1807;gene_synonym=JW5295;db_xref=EcoGene:EG13514 EMBL CDS 1893367 1893711 . + 0 ID=.3946;gene=yoaB;locus_tag=b1809;gene_synonym=ECK1807;gene_synonym=JW5295;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=putative reactive intermediate deaminase;protein_id=AAC74879.2;db_xref=GI:87081979;db_xref=ASAP:ABE-0006020;db_xref=UniProtKB/Swiss-Prot:P0AEB7;db_xref=EcoGene:EG13514 EMBL gene 1894133 1894432 . + . ID=.3947;gene=yoaC;locus_tag=b1810;gene_synonym=ECK1808;gene_synonym=JW5296;db_xref=EcoGene:EG13515 EMBL CDS 1894133 1894432 . + 0 ID=.3948;gene=yoaC;locus_tag=b1810;gene_synonym=ECK1808;gene_synonym=JW5296;codon_start=1;transl_table=11;product=DUF1889 family protein;protein_id=AAC74880.2;db_xref=GI:226510951;db_xref=ASAP:ABE-0006024;db_xref=UniProtKB/Swiss-Prot:P64490;db_xref=EcoGene:EG13515 EMBL gene 1894552 1894731 . - . ID=.3949;gene=yoaH;locus_tag=b1811;gene_synonym=ECK1809;gene_synonym=JW1800;db_xref=EcoGene:EG14306 EMBL CDS 1894552 1894731 . - 0 ID=.3950;gene=yoaH;locus_tag=b1811;gene_synonym=ECK1809;gene_synonym=JW1800;codon_start=1;transl_table=11;product=UPF0181 family protein;protein_id=AAC74881.1;db_xref=GI:1788113;db_xref=ASAP:ABE-0006026;db_xref=UniProtKB/Swiss-Prot:P67338;db_xref=EcoGene:EG14306 EMBL gene 1894805 1896166 . + . ID=.3951;gene=pabB;locus_tag=b1812;gene_synonym=ECK1810;gene_synonym=JW1801;db_xref=EcoGene:EG10683 EMBL CDS 1894805 1896166 . + 0 ID=.3952;gene=pabB;locus_tag=b1812;gene_synonym=ECK1810;gene_synonym=JW1801;ec_number=2.6.1.85;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Folic acid;note=p-aminobenzoate synthetase%2C component I%3B GO_process: GO:0046656 - folic acid biosynthetic process;codon_start=1;transl_table=11;product=aminodeoxychorismate synthase%2C subunit I;protein_id=AAC74882.1;db_xref=GI:1788114;db_xref=ASAP:ABE-0006031;db_xref=UniProtKB/Swiss-Prot:P05041;db_xref=EcoGene:EG10683 EMBL gene 1896170 1896748 . + . ID=.3953;gene=nudL;locus_tag=b1813;gene_synonym=ECK1811;gene_synonym=JW1802;gene_synonym=yeaB;db_xref=EcoGene:EG12693 EMBL CDS 1896170 1896748 . + 0 ID=.3954;gene=nudL;locus_tag=b1813;gene_synonym=ECK1811;gene_synonym=JW1802;gene_synonym=yeaB;codon_start=1;transl_table=11;product=putative CoA pyrophosphohydrolase%2C weak 3-phosphohydroxypyruvate phosphatase;protein_id=AAC74883.1;db_xref=GI:1788115;db_xref=ASAP:ABE-0006035;db_xref=UniProtKB/Swiss-Prot:P43337;db_xref=EcoGene:EG12693 EMBL gene 1896932 1898296 . + . ID=.3955;gene=sdaA;locus_tag=b1814;gene_synonym=ECK1812;gene_synonym=JW1803;db_xref=EcoGene:EG10930 EMBL CDS 1896932 1898296 . + 0 ID=.3956;gene=sdaA;locus_tag=b1814;gene_synonym=ECK1812;gene_synonym=JW1803;ec_number=4.3.1.17;function=enzyme%3B Degradation of small molecules: Amino acids;experiment=N-terminus verified by Edman degradation: PMID 8436113;note=L-serine deaminase%3B GO_process: GO:0009063 - cellular amino acid catabolic process;codon_start=1;transl_table=11;product=L-serine dehydratase 1;protein_id=AAC74884.1;db_xref=GI:1788116;db_xref=ASAP:ABE-0006039;db_xref=UniProtKB/Swiss-Prot:P16095;db_xref=EcoGene:EG10930 EMBL gene 1898427 1900025 . + . ID=.3957;gene=yoaD;locus_tag=b1815;gene_synonym=adrB;gene_synonym=ECK1813;gene_synonym=JW1804;db_xref=EcoGene:EG13516 EMBL CDS 1898427 1900025 . + 0 ID=.3958;gene=yoaD;locus_tag=b1815;gene_synonym=adrB;gene_synonym=ECK1813;gene_synonym=JW1804;codon_start=1;transl_table=11;product=putative membrane-anchored cyclic-di-GMP phosphodiesterase%2C regulator of cellulose production;protein_id=AAC74885.2;db_xref=GI:87081980;db_xref=ASAP:ABE-0006043;db_xref=UniProtKB/Swiss-Prot:P76261;db_xref=EcoGene:EG13516 EMBL gene 1900029 1901585 . - . ID=.3959;gene=yoaE;locus_tag=b1816;gene_synonym=borG;gene_synonym=ECK1814;gene_synonym=JW1805;db_xref=EcoGene:EG13517 EMBL CDS 1900029 1901585 . - 0 ID=.3960;gene=yoaE;locus_tag=b1816;gene_synonym=borG;gene_synonym=ECK1814;gene_synonym=JW1805;function=putative transport%3B Not classified;note=putative transport protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=putative membrane protein/conserved protein;protein_id=AAC74886.1;db_xref=GI:1788119;db_xref=ASAP:ABE-0006045;db_xref=UniProtKB/Swiss-Prot:P0AEC0;db_xref=EcoGene:EG13517 EMBL gene 1902048 1903019 . + . ID=.3961;gene=manX;locus_tag=b1817;gene_synonym=ECK1815;gene_synonym=gptB;gene_synonym=JW1806;gene_synonym=mpt;gene_synonym=ptsL;gene_synonym=ptsX;db_xref=EcoGene:EG10567 EMBL CDS 1902048 1903019 . + 0 ID=.3962;gene=manX;locus_tag=b1817;gene_synonym=ECK1815;gene_synonym=gptB;gene_synonym=JW1806;gene_synonym=mpt;gene_synonym=ptsL;gene_synonym=ptsX;ec_number=2.7.1.69;function=enzyme%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=PTS enzyme IIAB%2C mannose-specific%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=fused mannose-specific PTS enzymes: IIA component/IIB component;protein_id=AAC74887.1;db_xref=GI:1788120;db_xref=ASAP:ABE-0006054;db_xref=UniProtKB/Swiss-Prot:P69797;db_xref=EcoGene:EG10567 EMBL gene 1903082 1903882 . + . ID=.3963;gene=manY;locus_tag=b1818;gene_synonym=ECK1816;gene_synonym=JW1807;gene_synonym=pel;gene_synonym=ptsP;gene_synonym=ptsX;db_xref=EcoGene:EG10568 EMBL CDS 1903082 1903882 . + 0 ID=.3964;gene=manY;locus_tag=b1818;gene_synonym=ECK1816;gene_synonym=JW1807;gene_synonym=pel;gene_synonym=ptsP;gene_synonym=ptsX;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=PTS enzyme IIC%2C mannose-specific%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=mannose-specific enzyme IIC component of PTS;protein_id=AAC74888.1;db_xref=GI:1788121;db_xref=ASAP:ABE-0006056;db_xref=UniProtKB/Swiss-Prot:P69801;db_xref=EcoGene:EG10568 EMBL gene 1903895 1904746 . + . ID=.3965;gene=manZ;locus_tag=b1819;gene_synonym=ECK1817;gene_synonym=gptB;gene_synonym=JW1808;gene_synonym=mpt;gene_synonym=ptsM;gene_synonym=ptsX;db_xref=EcoGene:EG10569 EMBL CDS 1903895 1904746 . + 0 ID=.3966;gene=manZ;locus_tag=b1819;gene_synonym=ECK1817;gene_synonym=gptB;gene_synonym=JW1808;gene_synonym=mpt;gene_synonym=ptsM;gene_synonym=ptsX;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=PTS enzyme IID%2C mannose-specific%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=mannose-specific enzyme IID component of PTS;protein_id=AAC74889.2;db_xref=GI:345297175;db_xref=ASAP:ABE-0006058;db_xref=UniProtKB/Swiss-Prot:P69805;db_xref=EcoGene:EG10569 EMBL gene 1904801 1905259 . + . ID=.3967;gene=yobD;locus_tag=b1820;gene_synonym=ECK1818;gene_synonym=JW1809;db_xref=EcoGene:EG13948 EMBL CDS 1904801 1905259 . + 0 ID=.3968;gene=yobD;locus_tag=b1820;gene_synonym=ECK1818;gene_synonym=JW1809;codon_start=1;transl_table=11;product=UPF0266 family inner membrane protein;protein_id=AAC74890.1;db_xref=GI:1788123;db_xref=ASAP:ABE-0006062;db_xref=UniProtKB/Swiss-Prot:P67601;db_xref=EcoGene:EG13948 EMBL gene 1905688 1906254 . + . ID=.3969;gene=mntP;locus_tag=b1821;gene_synonym=ECK1819;gene_synonym=JW5830;gene_synonym=yebN;db_xref=EcoGene:EG14012 EMBL CDS 1905688 1906254 . + 0 ID=.3970;gene=mntP;locus_tag=b1821;gene_synonym=ECK1819;gene_synonym=JW5830;gene_synonym=yebN;function=putative transport%3B Not classified;codon_start=1;transl_table=11;product=putative Mn(2+) efflux pump%2C mntR-regulated;protein_id=AAC74891.2;db_xref=GI:87081981;db_xref=ASAP:ABE-0006065;db_xref=UniProtKB/Swiss-Prot:P76264;db_xref=EcoGene:EG14012 EMBL gene 1906251 1907060 . - . ID=.3971;gene=rlmA;locus_tag=b1822;gene_synonym=ECK1820;gene_synonym=JW1811;gene_synonym=rrmA;gene_synonym=yebH;db_xref=EcoGene:EG12207 EMBL CDS 1906251 1907060 . - 0 ID=.3972;gene=rlmA;locus_tag=b1822;gene_synonym=ECK1820;gene_synonym=JW1811;gene_synonym=rrmA;gene_synonym=yebH;ec_number=2.1.1.187;function=enzyme%3B rRNA modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009451 - RNA modification;codon_start=1;transl_table=11;product=23S rRNA m(1)G745 methyltransferase%2C SAM-dependent;protein_id=AAC74892.1;db_xref=GI:1788125;db_xref=ASAP:ABE-0006067;db_xref=UniProtKB/Swiss-Prot:P36999;db_xref=EcoGene:EG12207 EMBL gene 1907226 1907435 . - . ID=.3973;gene=cspC;locus_tag=b1823;gene_synonym=ECK1821;gene_synonym=JW1812;gene_synonym=msmB;db_xref=EcoGene:EG12204 EMBL CDS 1907226 1907435 . - 0 ID=.3974;gene=cspC;locus_tag=b1823;gene_synonym=ECK1821;gene_synonym=JW1812;gene_synonym=msmB;function=phenotype%3B Not classified;note=cold shock protein%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0006350 - transcription%3B GO_process: GO:0009266 - response to temperature stimulus;codon_start=1;transl_table=11;product=stress protein%2C member of the CspA-family;protein_id=AAC74893.1;db_xref=GI:1788126;db_xref=ASAP:ABE-0006070;db_xref=UniProtKB/Swiss-Prot:P0A9Y6;db_xref=EcoGene:EG12204 EMBL gene 1907448 1907591 . - . ID=.3975;gene=yobF;locus_tag=b1824;gene_synonym=ECK1822;gene_synonym=JW1813;db_xref=EcoGene:EG14382 EMBL CDS 1907448 1907591 . - 0 ID=.3976;gene=yobF;locus_tag=b1824;gene_synonym=ECK1822;gene_synonym=JW1813;codon_start=1;transl_table=11;product=DUF2527 family heat-induced protein;protein_id=AAC74894.1;db_xref=GI:1788127;db_xref=ASAP:ABE-0006072;db_xref=UniProtKB/Swiss-Prot:P64508;db_xref=EcoGene:EG14382 EMBL gene 1908261 1908548 . - . ID=.3977;gene=yebO;locus_tag=b1825;gene_synonym=ECK1823;gene_synonym=JW1814;db_xref=EcoGene:EG14014 EMBL CDS 1908261 1908548 . - 0 ID=.3978;gene=yebO;locus_tag=b1825;gene_synonym=ECK1823;gene_synonym=JW1814;codon_start=1;transl_table=11;product=putative inner membrane protein;protein_id=AAC74895.1;db_xref=GI:1788128;db_xref=ASAP:ABE-0006075;db_xref=UniProtKB/Swiss-Prot:P64499;db_xref=EcoGene:EG14014 EMBL gene 1908623 1908766 . - . ID=.3979;gene=mgrB;locus_tag=b1826;gene_synonym=ECK1824;gene_synonym=JW1815;gene_synonym=yobG;db_xref=EcoGene:EG14383 EMBL CDS 1908623 1908766 . - 0 ID=.3980;gene=mgrB;locus_tag=b1826;gene_synonym=ECK1824;gene_synonym=JW1815;gene_synonym=yobG;function=regulator%3B Not classified;codon_start=1;transl_table=11;product=regulatory peptide for PhoPQ%2C feedback inhibition;protein_id=AAC74896.1;db_xref=GI:1788130;db_xref=ASAP:ABE-0006078;db_xref=UniProtKB/Swiss-Prot:P64512;db_xref=EcoGene:EG14383 EMBL gene 1908925 1909164 . + . ID=.3981;gene=yobH;locus_tag=b4536;gene_synonym=ECK1825;gene_synonym=JW5298;db_xref=EcoGene:EG14424 EMBL CDS 1908925 1909164 . + 0 ID=.3982;gene=yobH;locus_tag=b4536;gene_synonym=ECK1825;gene_synonym=JW5298;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=ABD18672.1;db_xref=GI:87081982;db_xref=ASAP:ABE-0285057;db_xref=UniProtKB/Swiss-Prot:Q2MB16;db_xref=EcoGene:EG14424 EMBL gene 1909308 1910099 . - . ID=.3983;gene=kdgR;locus_tag=b1827;gene_synonym=ECK1826;gene_synonym=JW1816;gene_synonym=yebP;db_xref=EcoGene:EG14018 EMBL CDS 1909308 1910099 . - 0 ID=.3984;gene=kdgR;locus_tag=b1827;gene_synonym=ECK1826;gene_synonym=JW1816;gene_synonym=yebP;function=regulator%3B Not classified;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=KDG regulon transcriptional repressor;protein_id=AAC74897.1;db_xref=GI:1788131;db_xref=ASAP:ABE-0006081;db_xref=UniProtKB/Swiss-Prot:P76268;db_xref=EcoGene:EG14018 EMBL gene 1910276 1911649 . + . ID=.3985;gene=yebQ;locus_tag=b1828;gene_synonym=ECK1827;gene_synonym=JW5299;db_xref=EcoGene:EG14019 EMBL CDS 1910276 1911649 . + 0 ID=.3986;gene=yebQ;locus_tag=b1828;gene_synonym=ECK1827;gene_synonym=JW5299;function=putative transport%3B Not classified;note=putative transport protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative transporter;protein_id=AAC74898.2;db_xref=GI:87081983;db_xref=ASAP:ABE-0006085;db_xref=UniProtKB/Swiss-Prot:P76269;db_xref=EcoGene:EG14019 EMBL gene 1911695 1912576 . - . ID=.3987;gene=htpX;locus_tag=b1829;gene_synonym=ECK1828;gene_synonym=JW1818;db_xref=EcoGene:EG10462 EMBL CDS 1911695 1912576 . - 0 ID=.3988;gene=htpX;locus_tag=b1829;gene_synonym=ECK1828;gene_synonym=JW1818;function=orf%3B Adaptations%2C atypical conditions;note=heat shock protein%2C integral membrane protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009266 - response to temperature stimulus;codon_start=1;transl_table=11;product=putative endopeptidase;protein_id=AAC74899.1;db_xref=GI:1788133;db_xref=ASAP:ABE-0006087;db_xref=UniProtKB/Swiss-Prot:P23894;db_xref=EcoGene:EG10462 EMBL gene 1912768 1914816 . - . ID=.3989;gene=prc;locus_tag=b1830;gene_synonym=ECK1829;gene_synonym=JW1819;gene_synonym=tsp;db_xref=EcoGene:EG10760 EMBL CDS 1912768 1914816 . - 0 ID=.3990;gene=prc;locus_tag=b1830;gene_synonym=ECK1829;gene_synonym=JW1819;gene_synonym=tsp;ec_number=3.4.21.102;function=enzyme%3B Degradation of proteins%2C peptides%2C glyco;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_process: GO:0009252 - peptidoglycan biosynthetic process%3B GO_process: GO:0006457 - protein folding%3B GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=carboxy-terminal protease for penicillin-binding protein 3;protein_id=AAC74900.1;db_xref=GI:1788134;db_xref=ASAP:ABE-0006090;db_xref=UniProtKB/Swiss-Prot:P23865;db_xref=EcoGene:EG10760 EMBL gene 1914836 1915534 . - . ID=.3991;gene=proQ;locus_tag=b1831;gene_synonym=ECK1830;gene_synonym=JW5300;gene_synonym=yebJ;gene_synonym=yobE;gene_synonym=yoeC;db_xref=EcoGene:EG12866 EMBL CDS 1914836 1915534 . - 0 ID=.3992;gene=proQ;locus_tag=b1831;gene_synonym=ECK1830;gene_synonym=JW5300;gene_synonym=yebJ;gene_synonym=yobE;gene_synonym=yoeC;note=regulator of ProP%3B putative structural element which influences activation of ProP%3B GO_process: GO:0006970 - response to osmotic stress;codon_start=1;transl_table=11;product=RNA chaperone%2C putative ProP translation regulator;protein_id=AAC74901.2;db_xref=GI:48994892;db_xref=ASAP:ABE-0006092;db_xref=UniProtKB/Swiss-Prot:P45577;db_xref=EcoGene:EG12866 EMBL gene 1915631 1916128 . - . ID=.3993;gene=msrC;locus_tag=b1832;gene_synonym=ECK1831;gene_synonym=JW1821;gene_synonym=yebR;db_xref=EcoGene:EG14020 EMBL CDS 1915631 1916128 . - 0 ID=.3994;gene=msrC;locus_tag=b1832;gene_synonym=ECK1831;gene_synonym=JW1821;gene_synonym=yebR;codon_start=1;transl_table=11;product=free methionine-(R)-sulfoxide reductase;protein_id=AAC74902.2;db_xref=GI:171474009;db_xref=ASAP:ABE-0006095;db_xref=UniProtKB/Swiss-Prot:P76270;db_xref=EcoGene:EG14020 EMBL gene 1916258 1917541 . + . ID=.3995;gene=yebS;locus_tag=b1833;gene_synonym=ECK1832;gene_synonym=JW1822;db_xref=EcoGene:EG14021 EMBL CDS 1916258 1917541 . + 0 ID=.3996;gene=yebS;locus_tag=b1833;gene_synonym=ECK1832;gene_synonym=JW1822;note=GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=inner membrane PqiA domain protein;protein_id=AAC74903.1;db_xref=GI:1788137;db_xref=ASAP:ABE-0006098;db_xref=UniProtKB/Swiss-Prot:P0AD03;db_xref=EcoGene:EG14021 EMBL gene 1917510 1920143 . + . ID=.3997;gene=yebT;locus_tag=b1834;gene_synonym=ECK1833;gene_synonym=JW1823;db_xref=EcoGene:EG14022 EMBL CDS 1917510 1920143 . + 0 ID=.3998;gene=yebT;locus_tag=b1834;gene_synonym=ECK1833;gene_synonym=JW1823;note=GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=MCE domain protein;protein_id=AAC74904.2;db_xref=GI:87081984;db_xref=ASAP:ABE-0006101;db_xref=UniProtKB/Swiss-Prot:P76272;db_xref=EcoGene:EG14022 EMBL gene 1920223 1921662 . + . ID=.3999;gene=rsmF;locus_tag=b1835;gene_synonym=ECK1834;gene_synonym=JW5301;gene_synonym=yebU;db_xref=EcoGene:EG14023 EMBL CDS 1920223 1921662 . + 0 ID=.4000;gene=rsmF;locus_tag=b1835;gene_synonym=ECK1834;gene_synonym=JW5301;gene_synonym=yebU;function=enzyme%3B rRNA modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009451 - RNA modification;codon_start=1;transl_table=11;product=16S rRNA m(5)C1407 methyltransferase%2C SAM-dependent;protein_id=AAC74905.2;db_xref=GI:87081985;db_xref=ASAP:ABE-0006106;db_xref=UniProtKB/Swiss-Prot:P76273;db_xref=EcoGene:EG14023 EMBL gene 1921780 1922016 . + . ID=.4001;gene=yebV;locus_tag=b1836;gene_synonym=ECK1835;gene_synonym=JW5302;db_xref=EcoGene:EG14024 EMBL CDS 1921780 1922016 . + 0 ID=.4002;gene=yebV;locus_tag=b1836;gene_synonym=ECK1835;gene_synonym=JW5302;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC74906.2;db_xref=GI:87081986;db_xref=ASAP:ABE-0006110;db_xref=UniProtKB/Swiss-Prot:P64503;db_xref=EcoGene:EG14024 EMBL gene 1922121 1922312 . + . ID=.4003;gene=yebW;locus_tag=b1837;gene_synonym=ECK1836;gene_synonym=JW5303;db_xref=EcoGene:EG14025 EMBL CDS 1922121 1922312 . + 0 ID=.4004;gene=yebW;locus_tag=b1837;gene_synonym=ECK1836;gene_synonym=JW5303;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC74907.2;db_xref=GI:87081987;db_xref=ASAP:ABE-0006112;db_xref=UniProtKB/Swiss-Prot:P76275;db_xref=EcoGene:EG14025 EMBL gene 1922313 1922969 . - . ID=.4005;gene=pphA;locus_tag=b1838;gene_synonym=ECK1837;gene_synonym=JW1827;gene_synonym=prpA;gene_synonym=yebX;db_xref=EcoGene:EG14026 EMBL CDS 1922313 1922969 . - 0 ID=.4006;gene=pphA;locus_tag=b1838;gene_synonym=ECK1837;gene_synonym=JW1827;gene_synonym=prpA;gene_synonym=yebX;ec_number=3.1.3.16;function=regulator%3B Not classified;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006464 - protein modification process%3B GO_process: GO:0009266 - response to temperature stimulus;codon_start=1;transl_table=11;product=serine/threonine-specific protein phosphatase 1;protein_id=AAC74908.2;db_xref=GI:87081988;db_xref=ASAP:ABE-0006114;db_xref=UniProtKB/Swiss-Prot:P55798;db_xref=EcoGene:EG14026 EMBL gene 1923066 1923314 . + . ID=.4007;gene=ryeA;locus_tag=b4432;gene_synonym=ECK1838;gene_synonym=IS091;gene_synonym=JWR0237;gene_synonym=psrA8;gene_synonym=sraC;gene_synonym=tpke79;db_xref=EcoGene:EG31146 EMBL ncRNA 1923066 1923314 . + . ID=.4008;ncrna_class=other;gene=ryeA;locus_tag=b4432;gene_synonym=ECK1838;gene_synonym=IS091;gene_synonym=JWR0237;gene_synonym=psrA8;gene_synonym=sraC;gene_synonym=tpke79;product=novel sRNA%2C function unknown;note=identified in a large scale screen;db_xref=ASAP:ABE-0047252;db_xref=EcoGene:EG31146 EMBL gene 1923164 1923284 . - . ID=.4009;gene=sdsR;locus_tag=b4433;gene_synonym=ECK1839;gene_synonym=JWR0238;gene_synonym=ryeB;gene_synonym=tpke79;db_xref=EcoGene:EG31147 EMBL ncRNA 1923164 1923284 . - . ID=.4010;ncrna_class=other;gene=sdsR;locus_tag=b4433;gene_synonym=ECK1839;gene_synonym=JWR0238;gene_synonym=ryeB;gene_synonym=tpke79;product=novel sRNA%2C function unknown;note=identified in a large scale screen;db_xref=ASAP:ABE-0047253;db_xref=EcoGene:EG31147 EMBL gene 1923365 1923706 . - . ID=.4011;gene=yebY;locus_tag=b1839;gene_synonym=ECK1840;gene_synonym=JW1828;db_xref=EcoGene:EG14027 EMBL CDS 1923365 1923706 . - 0 ID=.4012;gene=yebY;locus_tag=b1839;gene_synonym=ECK1840;gene_synonym=JW1828;codon_start=1;transl_table=11;product=DUF2511 family protein;protein_id=AAC74909.1;db_xref=GI:1788144;db_xref=ASAP:ABE-0006118;db_xref=UniProtKB/Swiss-Prot:P64506;db_xref=EcoGene:EG14027 EMBL gene 1923719 1924591 . - . ID=.4013;gene=yebZ;locus_tag=b1840;gene_synonym=ECK1841;gene_synonym=JW1829;db_xref=EcoGene:EG14028 EMBL CDS 1923719 1924591 . - 0 ID=.4014;gene=yebZ;locus_tag=b1840;gene_synonym=ECK1841;gene_synonym=JW1829;function=putative transport%3B Drug/analog sensitivity;note=putative resistance protein%3B GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=inner membrane protein;protein_id=AAC74910.1;db_xref=GI:1788145;db_xref=ASAP:ABE-0006120;db_xref=UniProtKB/Swiss-Prot:P76278;db_xref=EcoGene:EG14028 EMBL gene 1924595 1924969 . - . ID=.4015;gene=yobA;locus_tag=b1841;gene_synonym=ECK1842;gene_synonym=JW1830;db_xref=EcoGene:EG14029 EMBL CDS 1924595 1924969 . - 0 ID=.4016;gene=yobA;locus_tag=b1841;gene_synonym=ECK1842;gene_synonym=JW1830;codon_start=1;transl_table=11;product=CopC family protein;protein_id=AAC74911.1;db_xref=GI:1788146;db_xref=ASAP:ABE-0006123;db_xref=UniProtKB/Swiss-Prot:P0AA57;db_xref=EcoGene:EG14029 EMBL gene 1925108 1925338 . + . ID=.4017;gene=holE;locus_tag=b1842;gene_synonym=ECK1843;gene_synonym=JW1831;db_xref=EcoGene:EG11505 EMBL CDS 1925108 1925338 . + 0 ID=.4018;gene=holE;locus_tag=b1842;gene_synonym=ECK1843;gene_synonym=JW1831;ec_number=2.7.7.7;function=enzyme%3B DNA - replication%2C repair%2C restriction/modification;experiment=N-terminus verified by Edman degradation: PMID 8246893%2C8505306;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006261 - DNA-dependent DNA replication;codon_start=1;transl_table=11;product=DNA polymerase III%2C theta subunit;protein_id=AAC74912.1;db_xref=GI:1788147;db_xref=ASAP:ABE-0006126;db_xref=UniProtKB/Swiss-Prot:P0ABS8;db_xref=EcoGene:EG11505 EMBL gene 1925440 1926096 . + . ID=.4019;gene=yobB;locus_tag=b1843;gene_synonym=ECK1844;gene_synonym=JW1832;db_xref=EcoGene:EG14030 EMBL CDS 1925440 1926096 . + 0 ID=.4020;gene=yobB;locus_tag=b1843;gene_synonym=ECK1844;gene_synonym=JW1832;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=C-N hydrolase family protein;protein_id=AAC74913.1;db_xref=GI:1788148;db_xref=ASAP:ABE-0006129;db_xref=UniProtKB/Swiss-Prot:P76280;db_xref=EcoGene:EG14030 EMBL gene 1926120 1926782 . + . ID=.4021;gene=exoX;locus_tag=b1844;gene_synonym=ECK1845;gene_synonym=JW1833;gene_synonym=yobC;db_xref=EcoGene:EG14031 EMBL CDS 1926120 1926782 . + 0 ID=.4022;gene=exoX;locus_tag=b1844;gene_synonym=ECK1845;gene_synonym=JW1833;gene_synonym=yobC;ec_number=3.1.11.-;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006308 - DNA catabolic process%3B GO_process: GO:0006281 - DNA repair;codon_start=1;transl_table=11;product=exodeoxyribonuclease 10%3B DNA exonuclease X;protein_id=AAC74914.1;db_xref=GI:1788149;db_xref=ASAP:ABE-0006131;db_xref=UniProtKB/Swiss-Prot:P0AEK0;db_xref=EcoGene:EG14031 EMBL gene 1926779 1928839 . - . ID=.4023;gene=ptrB;locus_tag=b1845;gene_synonym=ECK1846;gene_synonym=JW1834;gene_synonym=opdB;gene_synonym=tlp;db_xref=EcoGene:EG11004 EMBL CDS 1926779 1928839 . - 0 ID=.4024;gene=ptrB;locus_tag=b1845;gene_synonym=ECK1846;gene_synonym=JW1834;gene_synonym=opdB;gene_synonym=tlp;ec_number=3.4.21.83;function=enzyme%3B Degradation of proteins%2C peptides%2C glyco;experiment=N-terminus verified by Edman degradation: PMID 1769955;codon_start=1;transl_table=11;product=protease II;protein_id=AAC74915.1;db_xref=GI:1788150;db_xref=ASAP:ABE-0006133;db_xref=UniProtKB/Swiss-Prot:P24555;db_xref=EcoGene:EG11004 EMBL gene 1929048 1929707 . - . ID=.4025;gene=yebE;locus_tag=b1846;gene_synonym=ECK1847;gene_synonym=JW1835;db_xref=EcoGene:EG11806 EMBL CDS 1929048 1929707 . - 0 ID=.4026;gene=yebE;locus_tag=b1846;gene_synonym=ECK1847;gene_synonym=JW1835;codon_start=1;transl_table=11;product=DUF533 family inner membrane protein;protein_id=AAC74916.1;db_xref=GI:1788151;db_xref=ASAP:ABE-0006137;db_xref=UniProtKB/Swiss-Prot:P33218;db_xref=EcoGene:EG11806 EMBL repeat_region 1929923 1930006 . + . ID=.4027;note=REP135 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 1930034 1930390 . - . ID=.4028;gene=yebF;locus_tag=b1847;gene_synonym=ECK1848;gene_synonym=JW1836;db_xref=EcoGene:EG11807 EMBL CDS 1930034 1930390 . - 0 ID=.4029;gene=yebF;locus_tag=b1847;gene_synonym=ECK1848;gene_synonym=JW1836;codon_start=1;transl_table=11;product=extracellular Colicin M immunity family protein;protein_id=AAC74917.2;db_xref=GI:145693150;db_xref=ASAP:ABE-0006141;db_xref=UniProtKB/Swiss-Prot:P33219;db_xref=EcoGene:EG11807 EMBL gene 1930457 1930747 . - . ID=.4030;gene=yebG;locus_tag=b1848;gene_synonym=ECK1849;gene_synonym=JW1837;db_xref=EcoGene:EG11808 EMBL CDS 1930457 1930747 . - 0 ID=.4031;gene=yebG;locus_tag=b1848;gene_synonym=ECK1849;gene_synonym=JW1837;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006281 - DNA repair%3B GO_process: GO:0009432 - SOS response;codon_start=1;transl_table=11;product=DNA damage-inducible protein regulated by LexA;protein_id=AAC74918.1;db_xref=GI:1788153;db_xref=ASAP:ABE-0006145;db_xref=UniProtKB/Swiss-Prot:P0ACY9;db_xref=EcoGene:EG11808 EMBL gene 1930881 1932059 . + . ID=.4032;gene=purT;locus_tag=b1849;gene_synonym=ECK1850;gene_synonym=JW1838;db_xref=EcoGene:EG11809 EMBL CDS 1930881 1932059 . + 0 ID=.4033;gene=purT;locus_tag=b1849;gene_synonym=ECK1850;gene_synonym=JW1838;ec_number=2.7.2.1;function=enzyme%3B Purine ribonucleotide biosynthesis;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006164 - purine nucleotide biosynthetic process;codon_start=1;transl_table=11;product=phosphoribosylglycinamide formyltransferase 2;protein_id=AAC74919.1;db_xref=GI:1788155;db_xref=ASAP:ABE-0006162;db_xref=UniProtKB/Swiss-Prot:P33221;db_xref=EcoGene:EG11809 EMBL repeat_region 1932086 1932104 . + . ID=.4034;note=REP136 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 1932115 1932756 . - . ID=.4035;gene=eda;locus_tag=b1850;gene_synonym=ECK1851;gene_synonym=hga;gene_synonym=JW1839;gene_synonym=kdgA;gene_synonym=kga;db_xref=EcoGene:EG10256 EMBL CDS 1932115 1932756 . - 0 ID=.4036;gene=eda;locus_tag=b1850;gene_synonym=ECK1851;gene_synonym=hga;gene_synonym=JW1839;gene_synonym=kdgA;gene_synonym=kga;ec_number=4.1.2.14;ec_number=4.1.3.16;function=enzyme%3B Central intermediary metabolism: Entner-Douderoff;experiment=N-terminus verified by Edman degradation: PMID 3136164;note=2-keto-3-deoxygluconate 6-phosphate aldolase and 2-keto-4-hydroxyglutarate aldolase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0009255 - Entner-Doudoroff pathway%3B GO_process: GO:0009436 - glyoxylate catabolic process;codon_start=1;transl_table=11;product=KHG/KDPG aldolase%3B 2-dehydro-3-deoxy-phosphogluconate/4-hydroxy-2- oxoglutarate aldolase;protein_id=AAC74920.1;db_xref=GI:1788156;db_xref=ASAP:ABE-0006164;db_xref=UniProtKB/Swiss-Prot:P0A955;db_xref=EcoGene:EG10256 EMBL gene 1932793 1934604 . - . ID=.4037;gene=edd;locus_tag=b1851;gene_synonym=ECK1852;gene_synonym=JW1840;db_xref=EcoGene:EG10257 EMBL CDS 1932793 1934604 . - 0 ID=.4038;gene=edd;locus_tag=b1851;gene_synonym=ECK1852;gene_synonym=JW1840;ec_number=4.2.1.12;function=enzyme%3B Central intermediary metabolism: Entner-Douderoff;note=GO_process: GO:0009255 - Entner-Doudoroff pathway;codon_start=1;transl_table=11;product=6-phosphogluconate dehydratase;protein_id=AAC74921.1;db_xref=GI:1788157;db_xref=ASAP:ABE-0006166;db_xref=UniProtKB/Swiss-Prot:P0ADF6;db_xref=EcoGene:EG10257 EMBL gene 1934839 1936314 . - . ID=.4039;gene=zwf;locus_tag=b1852;gene_synonym=ECK1853;gene_synonym=JW1841;db_xref=EcoGene:EG11221 EMBL CDS 1934839 1936314 . - 0 ID=.4040;gene=zwf;locus_tag=b1852;gene_synonym=ECK1853;gene_synonym=JW1841;ec_number=1.1.1.49;function=enzyme%3B Energy metabolism%2C carbon: Oxidative branch%2C pentose pathway;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0009051 - pentose-phosphate shunt%2C oxidative branch;codon_start=1;transl_table=11;product=glucose-6-phosphate 1-dehydrogenase;protein_id=AAC74922.1;db_xref=GI:1788158;db_xref=ASAP:ABE-0006171;db_xref=UniProtKB/Swiss-Prot:P0AC53;db_xref=EcoGene:EG11221 EMBL gene 1936652 1937521 . + . ID=.4041;gene=yebK;locus_tag=b1853;gene_synonym=ECK1854;gene_synonym=hexR;gene_synonym=JW1842;db_xref=EcoGene:EG12860 EMBL CDS 1936652 1937521 . + 0 ID=.4042;gene=yebK;locus_tag=b1853;gene_synonym=ECK1854;gene_synonym=hexR;gene_synonym=JW1842;note=GO_process: GO:0006355 - regulation of transcription%2C DNA-dependent;codon_start=1;transl_table=11;product=putative DNA-binding transcriptional regulator;protein_id=AAC74923.1;db_xref=GI:1788159;db_xref=ASAP:ABE-0006179;db_xref=UniProtKB/Swiss-Prot:P46118;db_xref=EcoGene:EG12860 EMBL gene 1937649 1939091 . + . ID=.4043;gene=pykA;locus_tag=b1854;gene_synonym=ECK1855;gene_synonym=JW1843;db_xref=EcoGene:EG10803 EMBL CDS 1937649 1939091 . + 0 ID=.4044;gene=pykA;locus_tag=b1854;gene_synonym=ECK1855;gene_synonym=JW1843;ec_number=2.7.1.40;function=enzyme%3B Energy metabolism%2C carbon: Glycolysis;note=pyruvate kinase II%2C glucose stimulated%3B GO_process: GO:0006096 - glycolysis%3B GO_process: GO:0006113 - fermentation%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=pyruvate kinase II;protein_id=AAC74924.1;db_xref=GI:1788160;db_xref=ASAP:ABE-0006182;db_xref=UniProtKB/Swiss-Prot:P21599;db_xref=EcoGene:EG10803 EMBL repeat_region 1939099 1939128 . + . ID=.4045;note=REP137 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 1939222 1940193 . - . ID=.4046;gene=lpxM;locus_tag=b1855;gene_synonym=ECK1856;gene_synonym=JW1844;gene_synonym=mlt;gene_synonym=msbB;gene_synonym=waaN;db_xref=EcoGene:EG10614 EMBL CDS 1939222 1940193 . - 0 ID=.4047;gene=lpxM;locus_tag=b1855;gene_synonym=ECK1856;gene_synonym=JW1844;gene_synonym=mlt;gene_synonym=msbB;gene_synonym=waaN;ec_number=2.3.1.-;function=putative factor%3B Adaptations%2C atypical conditions;note=suppressor of htrB%2C heat shock protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0009245 - lipid A biosynthetic process;codon_start=1;transl_table=11;product=myristoyl-acyl carrier protein (ACP)-dependent acyltransferase;protein_id=AAC74925.1;db_xref=GI:1788161;db_xref=ASAP:ABE-0006185;db_xref=UniProtKB/Swiss-Prot:P24205;db_xref=EcoGene:EG10614 EMBL gene 1940313 1941635 . - . ID=.4048;gene=mepM;locus_tag=b1856;gene_synonym=ECK1857;gene_synonym=JW5304;gene_synonym=yebA;db_xref=EcoGene:EG10013 EMBL CDS 1940313 1941635 . - 0 ID=.4049;gene=mepM;locus_tag=b1856;gene_synonym=ECK1857;gene_synonym=JW5304;gene_synonym=yebA;function=enzyme%3B Murein sacculus%2C peptidoglycan;codon_start=1;transl_table=11;product=murein DD-endopeptidase%2C space-maker hydrolase%2C septation protein;protein_id=AAC74926.2;db_xref=GI:87081989;db_xref=ASAP:ABE-0006189;db_xref=UniProtKB/Swiss-Prot:P0AFS9;db_xref=EcoGene:EG10013 EMBL gene 1941651 1942583 . - . ID=.4050;gene=znuA;locus_tag=b1857;gene_synonym=ECK1858;gene_synonym=JW5831;gene_synonym=yebL;gene_synonym=yzzP;db_xref=EcoGene:EG12678 EMBL CDS 1941651 1942583 . - 0 ID=.4051;gene=znuA;locus_tag=b1857;gene_synonym=ECK1858;gene_synonym=JW5831;gene_synonym=yebL;gene_synonym=yzzP;function=putative factor%3B Not classified;note=GO_component: GO:0042597 - periplasmic space;codon_start=1;transl_table=11;product=zinc ABC transporter periplasmic binding protein;protein_id=AAC74927.2;db_xref=GI:87081990;db_xref=ASAP:ABE-0006191;db_xref=UniProtKB/Swiss-Prot:P39172;db_xref=EcoGene:EG12678 EMBL gene 1942662 1943417 . + . ID=.4052;gene=znuC;locus_tag=b1858;gene_synonym=ECK1859;gene_synonym=JW1847;gene_synonym=yebM;db_xref=EcoGene:EG13132 EMBL CDS 1942662 1943417 . + 0 ID=.4053;gene=znuC;locus_tag=b1858;gene_synonym=ECK1859;gene_synonym=JW1847;gene_synonym=yebM;function=putative transport%3B Not classified;note=GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=zinc ABC transporter ATPase;protein_id=AAC74928.1;db_xref=GI:1788165;db_xref=ASAP:ABE-0006198;db_xref=UniProtKB/Swiss-Prot:P0A9X1;db_xref=EcoGene:EG13132 EMBL gene 1943414 1944199 . + . ID=.4054;gene=znuB;locus_tag=b1859;gene_synonym=ECK1860;gene_synonym=JW1848;gene_synonym=yebI;db_xref=EcoGene:EG12368 EMBL CDS 1943414 1944199 . + 0 ID=.4055;gene=znuB;locus_tag=b1859;gene_synonym=ECK1860;gene_synonym=JW1848;gene_synonym=yebI;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=zinc ABC transporter permease;protein_id=AAC74929.1;db_xref=GI:1788166;db_xref=ASAP:ABE-0006201;db_xref=UniProtKB/Swiss-Prot:P39832;db_xref=EcoGene:EG12368 EMBL repeat_region 1944219 1944345 . + . ID=.4056;note=REP138 (repetitive extragenic palindromic) element%3B contains 3 REP sequences EMBL gene 1944346 1945356 . - . ID=.4057;gene=ruvB;locus_tag=b1860;gene_synonym=ECK1861;gene_synonym=JW1849;db_xref=EcoGene:EG10924 EMBL CDS 1944346 1945356 . - 0 ID=.4058;gene=ruvB;locus_tag=b1860;gene_synonym=ECK1861;gene_synonym=JW1849;ec_number=3.1.22.4;function=enzyme%3B DNA - replication%2C repair%2C restriction/modification;note=Holliday junction helicase subunit A%3B branch migration%3B repair%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006281 - DNA repair%3B GO_process: GO:0006310 - DNA recombination%3B GO_process: GO:0009432 - SOS response;codon_start=1;transl_table=11;product=ATP-dependent DNA helicase%2C component of RuvABC resolvasome;protein_id=AAC74930.1;db_xref=GI:1788167;db_xref=ASAP:ABE-0006204;db_xref=UniProtKB/Swiss-Prot:P0A812;db_xref=EcoGene:EG10924 EMBL gene 1945365 1945976 . - . ID=.4059;gene=ruvA;locus_tag=b1861;gene_synonym=ECK1862;gene_synonym=JW1850;db_xref=EcoGene:EG10923 EMBL CDS 1945365 1945976 . - 0 ID=.4060;gene=ruvA;locus_tag=b1861;gene_synonym=ECK1862;gene_synonym=JW1850;ec_number=3.1.22.4;function=enzyme%3B DNA - replication%2C repair%2C restriction/modification;note=Holliday junction helicase subunit B%3B branch migration%3B repair%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006281 - DNA repair%3B GO_process: GO:0006310 - DNA recombination%3B GO_process: GO:0009432 - SOS response;codon_start=1;transl_table=11;product=component of RuvABC resolvasome%2C regulatory subunit;protein_id=AAC74931.1;db_xref=GI:1788168;db_xref=ASAP:ABE-0006206;db_xref=UniProtKB/Swiss-Prot:P0A809;db_xref=EcoGene:EG10923 EMBL gene 1946115 1946180 . - . ID=.4061;gene=yobI;locus_tag=b4677;gene_synonym=ECK4492;db_xref=EcoGene:EG14482 EMBL CDS 1946115 1946180 . - 0 ID=.4062;gene=yobI;locus_tag=b4677;gene_synonym=ECK4492;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=ACO59996.1;db_xref=GI:226510952;db_xref=UniProtKB/Swiss-Prot:C1P604;db_xref=EcoGene:EG14482 EMBL gene 1946251 1946853 . + . ID=.4063;gene=yebB;locus_tag=b1862;gene_synonym=ECK1863;gene_synonym=JW5306;db_xref=EcoGene:EG11136 EMBL CDS 1946251 1946853 . + 0 ID=.4064;gene=yebB;locus_tag=b1862;gene_synonym=ECK1863;gene_synonym=JW5306;codon_start=1;transl_table=11;product=DUF830 family protein;protein_id=AAC74932.2;db_xref=GI:87081991;db_xref=ASAP:ABE-0006213;db_xref=UniProtKB/Swiss-Prot:P24238;db_xref=EcoGene:EG11136 EMBL gene 1946855 1947376 . - . ID=.4065;gene=ruvC;locus_tag=b1863;gene_synonym=ECK1864;gene_synonym=JW1852;db_xref=EcoGene:EG10925 EMBL CDS 1946855 1947376 . - 0 ID=.4066;gene=ruvC;locus_tag=b1863;gene_synonym=ECK1864;gene_synonym=JW1852;ec_number=3.1.22.4;function=enzyme%3B DNA - replication%2C repair%2C restriction/modification;note=Holliday junction nuclease%3B resolution of structures%3B repair%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006281 - DNA repair%3B GO_process: GO:0006310 - DNA recombination;codon_start=1;transl_table=11;product=component of RuvABC resolvasome%2C endonuclease;protein_id=AAC74933.1;db_xref=GI:1788170;db_xref=ASAP:ABE-0006215;db_xref=UniProtKB/Swiss-Prot:P0A814;db_xref=EcoGene:EG10925 EMBL gene 1947411 1948151 . - . ID=.4067;gene=yebC;locus_tag=b1864;gene_synonym=ECK1865;gene_synonym=JW1853;db_xref=EcoGene:EG11137 EMBL CDS 1947411 1948151 . - 0 ID=.4068;gene=yebC;locus_tag=b1864;gene_synonym=ECK1865;gene_synonym=JW1853;codon_start=1;transl_table=11;product=UPF0082 family protein;protein_id=AAC74934.1;db_xref=GI:1788171;db_xref=ASAP:ABE-0006219;db_xref=UniProtKB/Swiss-Prot:P0A8A0;db_xref=EcoGene:EG11137 EMBL gene 1948180 1948632 . - . ID=.4069;gene=nudB;locus_tag=b1865;gene_synonym=ECK1866;gene_synonym=JW1854;gene_synonym=ntpA;gene_synonym=orf17;gene_synonym=yebD;db_xref=EcoGene:EG11138 EMBL CDS 1948180 1948632 . - 0 ID=.4070;gene=nudB;locus_tag=b1865;gene_synonym=ECK1866;gene_synonym=JW1854;gene_synonym=ntpA;gene_synonym=orf17;gene_synonym=yebD;ec_number=3.6.1.-;function=enzyme%3B folate metabolism;note=GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion;codon_start=1;transl_table=11;product=dihydroneopterin triphosphate pyrophosphatase;protein_id=AAC74935.1;db_xref=GI:1788172;db_xref=ASAP:ABE-0006223;db_xref=UniProtKB/Swiss-Prot:P0AFC0;db_xref=EcoGene:EG11138 EMBL gene 1948750 1950522 . - . ID=.4071;gene=aspS;locus_tag=b1866;gene_synonym=ECK1867;gene_synonym=JW1855;gene_synonym=tls;db_xref=EcoGene:EG10097 EMBL CDS 1948750 1950522 . - 0 ID=.4072;gene=aspS;locus_tag=b1866;gene_synonym=ECK1867;gene_synonym=JW1855;gene_synonym=tls;ec_number=6.1.1.12;function=enzyme%3B Aminoacyl tRNA synthetases%2C tRNA modification;experiment=N-terminus verified by Edman degradation: PMID 2129559;note=aspartate tRNA synthetase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006418 - tRNA aminoacylation for protein translation;codon_start=1;transl_table=11;product=aspartyl-tRNA synthetase;protein_id=AAC74936.1;db_xref=GI:1788173;db_xref=ASAP:ABE-0006226;db_xref=UniProtKB/Swiss-Prot:P21889;db_xref=EcoGene:EG10097 EMBL gene 1950832 1951398 . + . ID=.4073;gene=yecD;locus_tag=b1867;gene_synonym=ECK1868;gene_synonym=JW5307;db_xref=EcoGene:EG12378 EMBL CDS 1950832 1951398 . + 0 ID=.4074;gene=yecD;locus_tag=b1867;gene_synonym=ECK1868;gene_synonym=JW5307;codon_start=1;transl_table=11;product=isochorismatase family protein;protein_id=AAC74937.2;db_xref=GI:87081992;db_xref=ASAP:ABE-0006231;db_xref=UniProtKB/Swiss-Prot:P0ADI7;db_xref=EcoGene:EG12378 EMBL gene 1951395 1952213 . + . ID=.4075;gene=yecE;locus_tag=b1868;gene_synonym=ECK1869;gene_synonym=JW1857;db_xref=EcoGene:EG12379 EMBL CDS 1951395 1952213 . + 0 ID=.4076;gene=yecE;locus_tag=b1868;gene_synonym=ECK1869;gene_synonym=JW1857;codon_start=1;transl_table=11;product=UPF0759 family protein;protein_id=AAC74938.1;db_xref=GI:1788175;db_xref=ASAP:ABE-0006233;db_xref=UniProtKB/Swiss-Prot:P37348;db_xref=EcoGene:EG12379 EMBL gene 1952266 1952661 . + . ID=.4077;gene=yecN;locus_tag=b1869;gene_synonym=ECK1870;gene_synonym=JW5308;db_xref=EcoGene:EG14032 EMBL CDS 1952266 1952661 . + 0 ID=.4078;gene=yecN;locus_tag=b1869;gene_synonym=ECK1870;gene_synonym=JW5308;codon_start=1;transl_table=11;product=MAPEG family inner membrane protein;protein_id=AAC74939.2;db_xref=GI:87081993;db_xref=ASAP:ABE-0006235;db_xref=UniProtKB/Swiss-Prot:P64515;db_xref=EcoGene:EG14032 EMBL gene 1952702 1953445 . + . ID=.4079;gene=cmoA;locus_tag=b1870;gene_synonym=ECK1871;gene_synonym=JW1859;gene_synonym=yecO;db_xref=EcoGene:EG14033 EMBL CDS 1952702 1953445 . + 0 ID=.4080;gene=cmoA;locus_tag=b1870;gene_synonym=ECK1871;gene_synonym=JW1859;gene_synonym=yecO;function=enzyme%3B tRNA modification;codon_start=1;transl_table=11;product=carboxy-SAM synthase;protein_id=AAC74940.1;db_xref=GI:1788177;db_xref=ASAP:ABE-0006237;db_xref=UniProtKB/Swiss-Prot:P76290;db_xref=EcoGene:EG14033 EMBL gene 1953442 1954413 . + . ID=.4081;gene=cmoB;locus_tag=b1871;gene_synonym=ECK1872;gene_synonym=JW1860;gene_synonym=yecP;db_xref=EcoGene:EG14034 EMBL CDS 1953442 1954413 . + 0 ID=.4082;gene=cmoB;locus_tag=b1871;gene_synonym=ECK1872;gene_synonym=JW1860;gene_synonym=yecP;function=enzyme%3B tRNA modification;note=putative enzyme;codon_start=1;transl_table=11;product=tRNA (cmo5U34)-carboxymethyltransferase%2C carboxy-SAM-dependent;protein_id=AAC74941.1;db_xref=GI:1788178;db_xref=ASAP:ABE-0006241;db_xref=UniProtKB/Swiss-Prot:P76291;db_xref=EcoGene:EG14034 EMBL repeat_region 1954429 1954526 . + . ID=.4083;note=RIP139 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 1954578 1957007 . - . ID=.4084;gene=torZ;locus_tag=b1872;gene_synonym=bisZ;gene_synonym=ECK1873;gene_synonym=JW1861;db_xref=EcoGene:EG13276 EMBL CDS 1954578 1957007 . - 0 ID=.4085;gene=torZ;locus_tag=b1872;gene_synonym=bisZ;gene_synonym=ECK1873;gene_synonym=JW1861;ec_number=1.6.6.9;function=enzyme%3B Central intermediary metabolism;note=GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=trimethylamine N-oxide reductase system III%2C catalytic subunit;protein_id=AAC74942.2;db_xref=GI:87081994;db_xref=ASAP:ABE-0006244;db_xref=UniProtKB/Swiss-Prot:P46923;db_xref=EcoGene:EG13276 EMBL gene 1957032 1958132 . - . ID=.4086;gene=torY;locus_tag=b1873;gene_synonym=ECK1874;gene_synonym=JW1862;gene_synonym=yecK;db_xref=EcoGene:EG13277 EMBL CDS 1957032 1958132 . - 0 ID=.4087;gene=torY;locus_tag=b1873;gene_synonym=ECK1874;gene_synonym=JW1862;gene_synonym=yecK;function=putative enzyme%3B Not classified;note=GO_function: GO:0009055 - electron carrier activity;codon_start=1;transl_table=11;product=TMAO reductase III (TorYZ)%2C cytochrome c-type subunit;protein_id=AAC74943.1;db_xref=GI:1788181;db_xref=ASAP:ABE-0006246;db_xref=UniProtKB/Swiss-Prot:P52005;db_xref=EcoGene:EG13277 EMBL gene 1958520 1959266 . - . ID=.4088;gene=cutC;locus_tag=b1874;gene_synonym=dinY?;gene_synonym=ECK1875;gene_synonym=JW1863;db_xref=EcoGene:EG12956 EMBL CDS 1958520 1959266 . - 0 ID=.4089;gene=cutC;locus_tag=b1874;gene_synonym=dinY?;gene_synonym=ECK1875;gene_synonym=JW1863;function=putative transport%3B Detoxification;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006805 - xenobiotic metabolic process;codon_start=1;transl_table=11;product=copper homeostasis protein;protein_id=AAC74944.2;db_xref=GI:87081995;db_xref=ASAP:ABE-0006252;db_xref=UniProtKB/Swiss-Prot:P67826;db_xref=EcoGene:EG12956 EMBL gene 1959280 1959846 . - . ID=.4090;gene=yecM;locus_tag=b1875;gene_synonym=ECK1876;gene_synonym=JW5309;gene_synonym=yecL;db_xref=EcoGene:EG13405 EMBL CDS 1959280 1959846 . - 0 ID=.4091;gene=yecM;locus_tag=b1875;gene_synonym=ECK1876;gene_synonym=JW5309;gene_synonym=yecL;codon_start=1;transl_table=11;product=putative metal-binding enzyme;protein_id=AAC74945.2;db_xref=GI:87081996;db_xref=ASAP:ABE-0006257;db_xref=UniProtKB/Swiss-Prot:P52007;db_xref=EcoGene:EG13405 EMBL gene 1960062 1961795 . + . ID=.4092;gene=argS;locus_tag=b1876;gene_synonym=ECK1877;gene_synonym=JW1865;gene_synonym=lov;db_xref=EcoGene:EG10071 EMBL CDS 1960062 1961795 . + 0 ID=.4093;gene=argS;locus_tag=b1876;gene_synonym=ECK1877;gene_synonym=JW1865;gene_synonym=lov;ec_number=6.1.1.19;function=enzyme%3B Aminoacyl tRNA synthetases%2C tRNA modification;experiment=N-terminus verified by Edman degradation: PMID 2668891;note=arginine tRNA synthetase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006418 - tRNA aminoacylation for protein translation;codon_start=1;transl_table=11;product=arginyl-tRNA synthetase;protein_id=AAC74946.1;db_xref=GI:1788184;db_xref=ASAP:ABE-0006264;db_xref=UniProtKB/Swiss-Prot:P11875;db_xref=EcoGene:EG10071 EMBL gene 1961972 1962460 . + . ID=.4094;gene=yecT;locus_tag=b1877;gene_synonym=ECK1878;gene_synonym=JW5310;db_xref=EcoGene:EG14316 EMBL CDS 1961972 1962460 . + 0 ID=.4095;gene=yecT;locus_tag=b1877;gene_synonym=ECK1878;gene_synonym=JW5310;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC74947.2;db_xref=GI:87081997;db_xref=ASAP:ABE-0006268;db_xref=UniProtKB/Swiss-Prot:P76296;db_xref=EcoGene:EG14316 EMBL gene 1962580 1962972 . - . ID=.4096;gene=flhE;locus_tag=b1878;gene_synonym=ECK1879;gene_synonym=JW1867;db_xref=EcoGene:EG14013 EMBL CDS 1962580 1962972 . - 0 ID=.4097;gene=flhE;locus_tag=b1878;gene_synonym=ECK1879;gene_synonym=JW1867;function=structural component%3B Surface structures;note=flagellar protein;codon_start=1;transl_table=11;product=proton seal during flagellar secretion;protein_id=AAC74948.1;db_xref=GI:1788186;db_xref=ASAP:ABE-0006270;db_xref=UniProtKB/Swiss-Prot:P76297;db_xref=EcoGene:EG14013 EMBL gene 1962972 1965050 . - . ID=.4098;gene=flhA;locus_tag=b1879;gene_synonym=ECK1880;gene_synonym=flaH;gene_synonym=JW1868;db_xref=EcoGene:EG14273 EMBL CDS 1962972 1965050 . - 0 ID=.4099;gene=flhA;locus_tag=b1879;gene_synonym=ECK1880;gene_synonym=flaH;gene_synonym=JW1868;function=putative structural component%3B Surface structures;note=flagellar biosynthesis%3B possible export of flagellar proteins%3B GO_component: GO:0019861 - flagellum%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009296 - flagellum assembly%3B GO_process: GO:0042330 - taxis;codon_start=1;transl_table=11;product=putative flagellar export pore protein;protein_id=AAC74949.1;db_xref=GI:1788187;db_xref=ASAP:ABE-0006272;db_xref=UniProtKB/Swiss-Prot:P76298;db_xref=EcoGene:EG14273 EMBL gene 1965043 1966191 . - . ID=.4100;gene=flhB;locus_tag=b1880;gene_synonym=ECK1881;gene_synonym=flaG;gene_synonym=JW1869;gene_synonym=yecQ;db_xref=EcoGene:EG14035 EMBL CDS 1965043 1966191 . - 0 ID=.4101;gene=flhB;locus_tag=b1880;gene_synonym=ECK1881;gene_synonym=flaG;gene_synonym=JW1869;gene_synonym=yecQ;function=structural component%3B Not classified;note=putative part of export apparatus for flagellar proteins%3B GO_component: GO:0019861 - flagellum%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=flagellin export apparatus%2C substrate specificity protein;protein_id=AAC74950.1;db_xref=GI:1788188;db_xref=ASAP:ABE-0006275;db_xref=UniProtKB/Swiss-Prot:P76299;db_xref=EcoGene:EG14035 EMBL repeat_region 1966322 1966384 . + . ID=.4102;note=REP140 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 1966393 1967037 . - . ID=.4103;gene=cheZ;locus_tag=b1881;gene_synonym=ECK1882;gene_synonym=JW1870;db_xref=EcoGene:EG10151 EMBL CDS 1966393 1967037 . - 0 ID=.4104;gene=cheZ;locus_tag=b1881;gene_synonym=ECK1882;gene_synonym=JW1870;function=regulator%3B Chemotaxis and mobility;note=chemotactic response%3B CheY protein phophatase%3B antagonist of CheY as switch regulator%3B GO_process: GO:0006464 - protein modification process%3B GO_process: GO:0042330 - taxis;codon_start=1;transl_table=11;product=chemotaxis regulator%2C protein phosphatase for CheY;protein_id=AAC74951.1;db_xref=GI:1788190;db_xref=ASAP:ABE-0006278;db_xref=UniProtKB/Swiss-Prot:P0A9H9;db_xref=EcoGene:EG10151 EMBL gene 1967048 1967437 . - . ID=.4105;gene=cheY;locus_tag=b1882;gene_synonym=ECK1883;gene_synonym=JW1871;db_xref=EcoGene:EG10150 EMBL CDS 1967048 1967437 . - 0 ID=.4106;gene=cheY;locus_tag=b1882;gene_synonym=ECK1883;gene_synonym=JW1871;function=regulator%3B Chemotaxis and mobility;note=chemotaxis regulator transmits chemoreceptor signals to flagelllar motor components%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0042330 - taxis;codon_start=1;transl_table=11;product=chemotaxis regulator transmitting signal to flagellar motor component;protein_id=AAC74952.1;db_xref=GI:1788191;db_xref=ASAP:ABE-0006280;db_xref=UniProtKB/Swiss-Prot:P0AE67;db_xref=EcoGene:EG10150 EMBL gene 1967452 1968501 . - . ID=.4107;gene=cheB;locus_tag=b1883;gene_synonym=ECK1884;gene_synonym=JW1872;db_xref=EcoGene:EG10147 EMBL CDS 1967452 1968501 . - 0 ID=.4108;gene=cheB;locus_tag=b1883;gene_synonym=ECK1884;gene_synonym=JW1872;ec_number=3.1.1.61;function=enzyme%3B Chemotaxis and mobility;note=response regulator for chemotaxis (cheA sensor)%3B protein methylesterase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006464 - protein modification process%3B GO_process: GO:0042330 - taxis;codon_start=1;transl_table=11;product=fused chemotaxis regulator: protein-glutamate methylesterase in two-component regulatory system with CheA;protein_id=AAC74953.1;db_xref=GI:1788192;db_xref=ASAP:ABE-0006284;db_xref=UniProtKB/Swiss-Prot:P07330;db_xref=EcoGene:EG10147 EMBL gene 1968504 1969364 . - . ID=.4109;gene=cheR;locus_tag=b1884;gene_synonym=cheX;gene_synonym=ECK1885;gene_synonym=JW1873;db_xref=EcoGene:EG10148 EMBL CDS 1968504 1969364 . - 0 ID=.4110;gene=cheR;locus_tag=b1884;gene_synonym=cheX;gene_synonym=ECK1885;gene_synonym=JW1873;ec_number=2.1.1.80;function=enzyme%3B Chemotaxis and mobility;note=response regulator for chemotaxis%3B protein glutamate methyltransferase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006464 - protein modification process%3B GO_process: GO:0042330 - taxis;codon_start=1;transl_table=11;product=chemotaxis regulator%2C protein-glutamate methyltransferase;protein_id=AAC74954.1;db_xref=GI:1788193;db_xref=ASAP:ABE-0006286;db_xref=UniProtKB/Swiss-Prot:P07364;db_xref=EcoGene:EG10148 EMBL gene 1969383 1970984 . - . ID=.4111;gene=tap;locus_tag=b1885;gene_synonym=ECK1886;gene_synonym=JW1874;db_xref=EcoGene:EG10987 EMBL CDS 1969383 1970984 . - 0 ID=.4112;gene=tap;locus_tag=b1885;gene_synonym=ECK1886;gene_synonym=JW1874;function=regulator%3B Chemotaxis and mobility;note=methyl-accepting chemotaxis protein IV%2C peptide sensor receptor%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0042330 - taxis;codon_start=1;transl_table=11;product=methyl-accepting protein IV;protein_id=AAC74955.1;db_xref=GI:1788194;db_xref=ASAP:ABE-0006288;db_xref=UniProtKB/Swiss-Prot:P07018;db_xref=EcoGene:EG10987 EMBL gene 1971030 1972691 . - . ID=.4113;gene=tar;locus_tag=b1886;gene_synonym=cheM;gene_synonym=ECK1887;gene_synonym=JW1875;db_xref=EcoGene:EG10988 EMBL CDS 1971030 1972691 . - 0 ID=.4114;gene=tar;locus_tag=b1886;gene_synonym=cheM;gene_synonym=ECK1887;gene_synonym=JW1875;function=regulator%3B Chemotaxis and mobility;note=methyl-accepting chemotaxis protein II%2C aspartate sensor receptor%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0042330 - taxis;codon_start=1;transl_table=11;product=methyl-accepting chemotaxis protein II;protein_id=AAC74956.1;db_xref=GI:1788195;db_xref=ASAP:ABE-0006290;db_xref=UniProtKB/Swiss-Prot:P07017;db_xref=EcoGene:EG10988 EMBL gene 1972836 1973339 . - . ID=.4115;gene=cheW;locus_tag=b1887;gene_synonym=ECK1888;gene_synonym=JW1876;db_xref=EcoGene:EG10149 EMBL CDS 1972836 1973339 . - 0 ID=.4116;gene=cheW;locus_tag=b1887;gene_synonym=ECK1888;gene_synonym=JW1876;function=regulator%3B Chemotaxis and mobility;note=positive regulator of CheA protein activity%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0042330 - taxis;codon_start=1;transl_table=11;product=purine-binding chemotaxis protein;protein_id=AAC74957.1;db_xref=GI:1788196;db_xref=ASAP:ABE-0006292;db_xref=UniProtKB/Swiss-Prot:P0A964;db_xref=EcoGene:EG10149 EMBL gene 1973360 1975324 . - . ID=.4117;gene=cheA;locus_tag=b1888;gene_synonym=ECK1889;gene_synonym=JW1877;db_xref=EcoGene:EG10146 EMBL CDS 1973360 1975324 . - 0 ID=.4118;gene=cheA;locus_tag=b1888;gene_synonym=ECK1889;gene_synonym=JW1877;function=enzyme%3B Chemotaxis and mobility;note=sensory transducer kinase between chemo- signal receptors and CheB and CheY%3B GO_process: GO:0006464 - protein modification process%3B GO_process: GO:0042330 - taxis;codon_start=1;transl_table=11;product=fused chemotactic sensory histidine kinase in two-component regulatory system with CheB and CheY: sensory histidine kinase/signal sensing protein;protein_id=AAC74958.1;db_xref=GI:1788197;db_xref=ASAP:ABE-0006294;db_xref=UniProtKB/Swiss-Prot:P07363;db_xref=EcoGene:EG10146 EMBL gene 1975329 1976255 . - . ID=.4119;gene=motB;locus_tag=b1889;gene_synonym=ECK1890;gene_synonym=flaJ;gene_synonym=JW1878;db_xref=EcoGene:EG10602 EMBL CDS 1975329 1976255 . - 0 ID=.4120;gene=motB;locus_tag=b1889;gene_synonym=ECK1890;gene_synonym=flaJ;gene_synonym=JW1878;function=structural component%3B Chemotaxis and mobility;note=enables flagellar motor rotation%2C linking torque machinery to cell wall%3B GO_component: GO:0019861 - flagellum%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0042330 - taxis;codon_start=1;transl_table=11;product=protein that enables flagellar motor rotation;protein_id=AAC74959.1;db_xref=GI:1788198;db_xref=ASAP:ABE-0006297;db_xref=UniProtKB/Swiss-Prot:P0AF06;db_xref=EcoGene:EG10602 EMBL gene 1976252 1977139 . - . ID=.4121;gene=motA;locus_tag=b1890;gene_synonym=ECK1891;gene_synonym=flaJ;gene_synonym=JW1879;db_xref=EcoGene:EG10601 EMBL CDS 1976252 1977139 . - 0 ID=.4122;gene=motA;locus_tag=b1890;gene_synonym=ECK1891;gene_synonym=flaJ;gene_synonym=JW1879;function=phenotype%3B Chemotaxis and mobility;note=proton conductor component of motor%3B no effect on switching%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0042330 - taxis;codon_start=1;transl_table=11;product=proton conductor component of flagella motor;protein_id=AAC74960.1;db_xref=GI:1788199;db_xref=ASAP:ABE-0006299;db_xref=UniProtKB/Swiss-Prot:P09348;db_xref=EcoGene:EG10601 EMBL gene 1977266 1977844 . - . ID=.4123;gene=flhC;locus_tag=b1891;gene_synonym=ECK1892;gene_synonym=flaI;gene_synonym=JW1880;db_xref=EcoGene:EG10319 EMBL CDS 1977266 1977844 . - 0 ID=.4124;gene=flhC;locus_tag=b1891;gene_synonym=ECK1892;gene_synonym=flaI;gene_synonym=JW1880;function=regulator%3B Surface structures;note=regulator of flagellar biosynthesis acting on class 2 operons%3B transcription initiation factor?%3B GO_component: GO:0019861 - flagellum%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0009296 - flagellum assembly%3B GO_process: GO:0006350 - transcription%3B GO_process: GO:0042330 - taxis;codon_start=1;transl_table=11;product=flagellar class II regulon transcriptional activator%2C with FlhD;protein_id=AAC74961.1;db_xref=GI:1788201;db_xref=ASAP:ABE-0006301;db_xref=UniProtKB/Swiss-Prot:P0ABY7;db_xref=EcoGene:EG10319 EMBL gene 1977847 1978197 . - . ID=.4125;gene=flhD;locus_tag=b1892;gene_synonym=ECK1893;gene_synonym=flbB;gene_synonym=JW1881;db_xref=EcoGene:EG10320 EMBL CDS 1977847 1978197 . - 0 ID=.4126;gene=flhD;locus_tag=b1892;gene_synonym=ECK1893;gene_synonym=flbB;gene_synonym=JW1881;function=regulator%3B Surface structures;note=regulator of flagellar biosynthesis%2C acting on class 2 operons%3B transcriptional initiation factor?%3B GO_component: GO:0019861 - flagellum%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0009296 - flagellum assembly%3B GO_process: GO:0006350 - transcription%3B GO_process: GO:0042330 - taxis;codon_start=1;transl_table=11;product=flagellar class II regulon transcriptional activator%2C with FlhC;protein_id=AAC74962.2;db_xref=GI:145693151;db_xref=ASAP:ABE-0006303;db_xref=UniProtKB/Swiss-Prot:P0A8S9;db_xref=EcoGene:EG10320 EMBL sequence_feature 1978503 1979270 . - . ID=.4127;note=*mobile_element_type: insertion sequence:IS1H EMBL gene 1978518 1979021 . - . ID=.4128;gene=insB1;locus_tag=b1893;gene_synonym=ECK0022;db_xref=EcoGene:EG40002 EMBL CDS 1978518 1979021 . - 0 ID=.4129;gene=insB1;locus_tag=b1893;gene_synonym=ECK0022;function=IS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;codon_start=1;transl_table=11;product=IS1 transposase B;protein_id=AAC74963.1;db_xref=GI:1788203;db_xref=ASAP:ABE-0006308;db_xref=UniProtKB/Swiss-Prot:P0CF30;db_xref=EcoGene:EG40002 EMBL gene 1978940 1979215 . - . ID=.4130;gene=insA;locus_tag=b1894;gene_synonym=ECK4541;note=insA8;db_xref=EcoGene:EG40001 EMBL CDS 1978940 1979215 . - 0 ID=.4131;gene=insA;locus_tag=b1894;gene_synonym=ECK4541;function=IS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;codon_start=1;transl_table=11;product=IS1 repressor TnpA;protein_id=AAC74964.1;db_xref=GI:1788204;db_xref=ASAP:ABE-0006311;db_xref=UniProtKB/Swiss-Prot:P0CF13;db_xref=EcoGene:EG40001 EMBL gene 1979753 1980181 . + . ID=.4132;gene=uspC;locus_tag=b1895;gene_synonym=ECK1894;gene_synonym=JW1884;gene_synonym=yecG;db_xref=EcoGene:EG12862 EMBL CDS 1979753 1980181 . + 0 ID=.4133;gene=uspC;locus_tag=b1895;gene_synonym=ECK1894;gene_synonym=JW1884;gene_synonym=yecG;function=putative regulator%3B Not classified;note=putative regulator;codon_start=1;transl_table=11;product=universal stress protein;protein_id=AAC74965.1;db_xref=GI:1788205;db_xref=ASAP:ABE-0006316;db_xref=UniProtKB/Swiss-Prot:P46888;db_xref=EcoGene:EG12862 EMBL gene 1980188 1981612 . - . ID=.4134;gene=otsA;locus_tag=b1896;gene_synonym=ECK1895;gene_synonym=JW5312;gene_synonym=pexA;db_xref=EcoGene:EG11751 EMBL CDS 1980188 1981612 . - 0 ID=.4135;gene=otsA;locus_tag=b1896;gene_synonym=ECK1895;gene_synonym=JW5312;gene_synonym=pexA;ec_number=2.4.1.15;function=enzyme%3B Osmotic adaptation;note=GO_process: GO:0006006 - glucose metabolic process%3B GO_process: GO:0006970 - response to osmotic stress;codon_start=1;transl_table=11;product=trehalose-6-phosphate synthase;protein_id=AAC74966.1;db_xref=GI:1788206;db_xref=ASAP:ABE-0006318;db_xref=UniProtKB/Swiss-Prot:P31677;db_xref=EcoGene:EG11751 EMBL gene 1981587 1982387 . - . ID=.4136;gene=otsB;locus_tag=b1897;gene_synonym=ECK1896;gene_synonym=JW1886;gene_synonym=otsP;db_xref=EcoGene:EG11752 EMBL CDS 1981587 1982387 . - 0 ID=.4137;gene=otsB;locus_tag=b1897;gene_synonym=ECK1896;gene_synonym=JW1886;gene_synonym=otsP;ec_number=3.1.3.12;function=enzyme%3B Osmotic adaptation;experiment=N-terminus verified by Edman degradation: PMID 8045430;note=trehalose-6-phosphate phophatase%2C biosynthetic%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006006 - glucose metabolic process%3B GO_process: GO:0006970 - response to osmotic stress;codon_start=1;transl_table=11;product=trehalose-6-phosphate phosphatase%2C biosynthetic;protein_id=AAC74967.1;db_xref=GI:1788207;db_xref=ASAP:ABE-0006320;db_xref=UniProtKB/Swiss-Prot:P31678;db_xref=EcoGene:EG11752 EMBL gene 1982554 1983540 . - . ID=.4138;gene=araH;locus_tag=b4460;gene_synonym=ECK1897;gene_synonym=JW1887;db_xref=EcoGene:EG10059 EMBL CDS 1982554 1983540 . - 0 ID=.4139;gene=araH;locus_tag=b4460;gene_synonym=ECK1897;gene_synonym=JW1887;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=high-affinity L-arabinose transport protein (ABC superfamily%2C membrane)%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=L-arabinose ABC transporter permease;protein_id=AAT48138.2;db_xref=GI:145693152;db_xref=ASAP:ABE-0174093;db_xref=UniProtKB/Swiss-Prot:P0AE26;db_xref=EcoGene:EG10059 EMBL gene 1983555 1985069 . - . ID=.4140;gene=araG;locus_tag=b1900;gene_synonym=ECK1898;gene_synonym=JW1888;db_xref=EcoGene:EG10058 EMBL CDS 1983555 1985069 . - 0 ID=.4141;gene=araG;locus_tag=b1900;gene_synonym=ECK1898;gene_synonym=JW1888;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=ATP-binding component of high-affinity L-arabinose transport system%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=L-arabinose ABC transporter ATPase;protein_id=AAC74970.1;db_xref=GI:1788210;db_xref=ASAP:ABE-0006328;db_xref=UniProtKB/Swiss-Prot:P0AAF3;db_xref=EcoGene:EG10058 EMBL gene 1985139 1986128 . - . ID=.4142;gene=araF;locus_tag=b1901;gene_synonym=ECK1899;gene_synonym=JW1889;db_xref=EcoGene:EG10057 EMBL CDS 1985139 1986128 . - 0 ID=.4143;gene=araF;locus_tag=b1901;gene_synonym=ECK1899;gene_synonym=JW1889;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=L-arabinose-binding periplasmic protein%3B periplasmic-binding component of ABC superfamily%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=L-arabinose ABC transporter periplasmic binding protein;protein_id=AAC74971.1;db_xref=GI:1788211;db_xref=ASAP:ABE-0006330;db_xref=UniProtKB/Swiss-Prot:P02924;db_xref=EcoGene:EG10057 EMBL gene 1986925 1987428 . + . ID=.4144;gene=ftnB;locus_tag=b1902;gene_synonym=ECK1900;gene_synonym=JW1890;gene_synonym=yecI;db_xref=EcoGene:EG13175 EMBL CDS 1986925 1987428 . + 0 ID=.4145;gene=ftnB;locus_tag=b1902;gene_synonym=ECK1900;gene_synonym=JW1890;gene_synonym=yecI;function=putative carrier%3B Transport of small molecules: Cations;note=ferritin-like protein%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006826 - iron ion transport;codon_start=1;transl_table=11;product=ferritin B%2C putative ferrous iron reservoir;protein_id=AAC74972.1;db_xref=GI:1788212;db_xref=ASAP:ABE-0006333;db_xref=UniProtKB/Swiss-Prot:P0A9A2;db_xref=EcoGene:EG13175 EMBL gene 1987507 1987758 . - . ID=.4146;gene=yecJ;locus_tag=b4537;gene_synonym=ECK1901;gene_synonym=JW1891;db_xref=EcoGene:EG13242 EMBL CDS 1987507 1987758 . - 0 ID=.4147;gene=yecJ;locus_tag=b4537;gene_synonym=ECK1901;gene_synonym=JW1891;note=GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=DUF2766 family protein;protein_id=AAC74973.2;db_xref=GI:87081998;db_xref=ASAP:ABE-0285058;db_xref=UniProtKB/Swiss-Prot:P0AD10;db_xref=EcoGene:EG13242 EMBL gene 1987873 1987959 . - . ID=.4148;gene=azuC;locus_tag=b4663;gene_synonym=ECK4478;gene_synonym=IS092;gene_synonym=isrB;db_xref=EcoGene:EG14468 EMBL CDS 1987873 1987959 . - 0 ID=.4149;gene=azuC;locus_tag=b4663;gene_synonym=ECK4478;gene_synonym=IS092;gene_synonym=isrB;codon_start=1;transl_table=11;product=acid-inducible small membrane-associated protein;protein_id=ACO59997.1;db_xref=GI:226510953;db_xref=UniProtKB/Swiss-Prot:C1P605;db_xref=EcoGene:EG14468 EMBL gene 1988222 1988545 . + . ID=.4150;gene=yecR;locus_tag=b1904;gene_synonym=ECK1903;gene_synonym=JW1892;db_xref=EcoGene:EG14036 EMBL CDS 1988222 1988545 . + 0 ID=.4151;gene=yecR;locus_tag=b1904;gene_synonym=ECK1903;gene_synonym=JW1892;codon_start=1;transl_table=11;product=lipoprotein%2C function unknown;protein_id=AAC74974.1;db_xref=GI:1788215;db_xref=ASAP:ABE-0006338;db_xref=UniProtKB/Swiss-Prot:P76308;db_xref=EcoGene:EG14036 EMBL gene 1988716 1989213 . + . ID=.4152;gene=ftnA;locus_tag=b1905;gene_synonym=ECK1904;gene_synonym=ftn;gene_synonym=gen-165;gene_synonym=JW1893;gene_synonym=rsgA;db_xref=EcoGene:EG10921 EMBL CDS 1988716 1989213 . + 0 ID=.4153;gene=ftnA;locus_tag=b1905;gene_synonym=ECK1904;gene_synonym=ftn;gene_synonym=gen-165;gene_synonym=JW1893;gene_synonym=rsgA;function=carrier%3B Transport of small molecules: Cations;experiment=N-terminus verified by Edman degradation: PMID 8281950;note=cytoplasmic ferritin (an iron storage protein)%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006826 - iron ion transport;codon_start=1;transl_table=11;product=ferritin iron storage protein (cytoplasmic);protein_id=AAC74975.1;db_xref=GI:1788216;db_xref=ASAP:ABE-0006342;db_xref=UniProtKB/Swiss-Prot:P0A998;db_xref=EcoGene:EG10921 EMBL gene 1989251 1989490 . - . ID=.4154;gene=yecH;locus_tag=b1906;gene_synonym=ECK1905;gene_synonym=JW1894;db_xref=EcoGene:EG12863 EMBL CDS 1989251 1989490 . - 0 ID=.4155;gene=yecH;locus_tag=b1906;gene_synonym=ECK1905;gene_synonym=JW1894;codon_start=1;transl_table=11;product=DUF2492 family protein;protein_id=AAC74976.1;db_xref=GI:1788217;db_xref=ASAP:ABE-0006344;db_xref=UniProtKB/Swiss-Prot:P46887;db_xref=EcoGene:EG12863 EMBL gene 1989681 1990892 . + . ID=.4156;gene=tyrP;locus_tag=b1907;gene_synonym=ECK1906;gene_synonym=JW1895;db_xref=EcoGene:EG11041 EMBL CDS 1989681 1990892 . + 0 ID=.4157;gene=tyrP;locus_tag=b1907;gene_synonym=ECK1906;gene_synonym=JW1895;function=transport%3B Transport of small molecules: Amino acids%2C amines;note=tyrosine-specific transport system%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006571 - tyrosine biosynthetic process;codon_start=1;transl_table=11;product=tyrosine transporter;protein_id=AAC74977.1;db_xref=GI:1788218;db_xref=ASAP:ABE-0006355;db_xref=UniProtKB/Swiss-Prot:P0AAD4;db_xref=EcoGene:EG11041 EMBL gene 1990954 1991619 . - . ID=.4158;gene=yecA;locus_tag=b1908;gene_synonym=ECK1907;gene_synonym=JW1896;db_xref=EcoGene:EG11139 EMBL CDS 1990954 1991619 . - 0 ID=.4159;gene=yecA;locus_tag=b1908;gene_synonym=ECK1907;gene_synonym=JW1896;codon_start=1;transl_table=11;product=UPF0149 family protein;protein_id=AAC74978.1;db_xref=GI:1788219;db_xref=ASAP:ABE-0006357;db_xref=UniProtKB/Swiss-Prot:P0AD05;db_xref=EcoGene:EG11139 EMBL gene 1991815 1991901 . - . ID=.4160;gene=leuZ;locus_tag=b1909;gene_synonym=ECK1908;gene_synonym=JWR0033;db_xref=EcoGene:EG30054 EMBL tRNA 1991815 1991901 . - . ID=.4161;gene=leuZ;locus_tag=b1909;gene_synonym=ECK1908;gene_synonym=JWR0033;product=tRNA-Leu;note=anticodon: GAG;db_xref=ASAP:ABE-0006361;db_xref=EcoGene:EG30054 EMBL gene 1991914 1991987 . - . ID=.4162;gene=cysT;locus_tag=b1910;gene_synonym=ECK1909;gene_synonym=JWR0034;db_xref=EcoGene:EG30026 EMBL tRNA 1991914 1991987 . - . ID=.4163;gene=cysT;locus_tag=b1910;gene_synonym=ECK1909;gene_synonym=JWR0034;product=tRNA-Cys;note=anticodon: GCA;db_xref=ASAP:ABE-0006363;db_xref=EcoGene:EG30026 EMBL gene 1992042 1992117 . - . ID=.4164;gene=glyW;locus_tag=b1911;gene_synonym=ECK1910;gene_synonym=ins;gene_synonym=JWR0035;gene_synonym=mutC;gene_synonym=suA58;gene_synonym=suA78;db_xref=EcoGene:EG30039 EMBL tRNA 1992042 1992117 . - . ID=.4165;gene=glyW;locus_tag=b1911;gene_synonym=ECK1910;gene_synonym=ins;gene_synonym=JWR0035;gene_synonym=mutC;gene_synonym=suA58;gene_synonym=suA78;product=tRNA-Gly;note=anticodon: GCC;db_xref=ASAP:ABE-0006365;db_xref=EcoGene:EG30039 EMBL gene 1992269 1992817 . - . ID=.4166;gene=pgsA;locus_tag=b1912;gene_synonym=ECK1911;gene_synonym=JW1897;db_xref=EcoGene:EG10706 EMBL CDS 1992269 1992817 . - 0 ID=.4167;gene=pgsA;locus_tag=b1912;gene_synonym=ECK1911;gene_synonym=JW1897;ec_number=2.7.8.5;function=enzyme%3B Macromolecule synthesis%2C modification: Phospholipids;note=phosphatidylglycerophosphate synthetase %3D CDP-1%2C2-diacyl-sn-glycero-3-phosphate phosphatidyl transferase%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0008654 - phospholipid biosynthetic process;codon_start=1;transl_table=11;product=phosphatidylglycerophosphate synthetase;protein_id=AAC74979.1;db_xref=GI:1788220;db_xref=ASAP:ABE-0006367;db_xref=UniProtKB/Swiss-Prot:P0ABF8;db_xref=EcoGene:EG10706 EMBL gene 1992874 1994706 . - . ID=.4168;gene=uvrC;locus_tag=b1913;gene_synonym=ECK1912;gene_synonym=JW1898;db_xref=EcoGene:EG11063 EMBL CDS 1992874 1994706 . - 0 ID=.4169;gene=uvrC;locus_tag=b1913;gene_synonym=ECK1912;gene_synonym=JW1898;function=enzyme%3B Degradation of DNA;note=excinuclease ABC%2C subunit C%3B repair of UV damage to DNA%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006308 - DNA catabolic process%3B GO_process: GO:0006281 - DNA repair%3B GO_process: GO:0009314 - response to radiation;codon_start=1;transl_table=11;product=excinuclease UvrABC%2C endonuclease subunit;protein_id=AAC74980.2;db_xref=GI:87081999;db_xref=ASAP:ABE-0006370;db_xref=UniProtKB/Swiss-Prot:P0A8G0;db_xref=EcoGene:EG11063 EMBL gene 1994703 1995359 . - . ID=.4170;gene=uvrY;locus_tag=b1914;gene_synonym=ECK1913;gene_synonym=gacA;gene_synonym=JW1899;gene_synonym=sirA;gene_synonym=yecB;db_xref=EcoGene:EG11140 EMBL CDS 1994703 1995359 . - 0 ID=.4171;gene=uvrY;locus_tag=b1914;gene_synonym=ECK1913;gene_synonym=gacA;gene_synonym=JW1899;gene_synonym=sirA;gene_synonym=yecB;function=putative regulator%3B Not classified;note=putative 2-component transcriptional regulator%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=response regulator in two-component regulatory system with BarA;protein_id=AAC74981.1;db_xref=GI:1788222;db_xref=ASAP:ABE-0006373;db_xref=UniProtKB/Swiss-Prot:P0AED5;db_xref=EcoGene:EG11140 EMBL gene 1995818 1996042 . + . ID=.4172;gene=yecF;locus_tag=b1915;gene_synonym=ECK1914;gene_synonym=JW1900;db_xref=EcoGene:EG12861 EMBL CDS 1995818 1996042 . + 0 ID=.4173;gene=yecF;locus_tag=b1915;gene_synonym=ECK1914;gene_synonym=JW1900;codon_start=1;transl_table=11;product=DUF2594 family protein;protein_id=AAC74982.1;db_xref=GI:1788223;db_xref=ASAP:ABE-0006379;db_xref=UniProtKB/Swiss-Prot:P0AD07;db_xref=EcoGene:EG12861 EMBL gene 1996110 1996832 . - . ID=.4174;gene=sdiA;locus_tag=b1916;gene_synonym=ECK1915;gene_synonym=JW1901;gene_synonym=uvrX;db_xref=EcoGene:EG10935 EMBL CDS 1996110 1996832 . - 0 ID=.4175;gene=sdiA;locus_tag=b1916;gene_synonym=ECK1915;gene_synonym=JW1901;gene_synonym=uvrX;function=regulator%3B Cell division;note=transcriptional regulator of ftsQAZ gene cluster%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=quorum-sensing transcriptional activator;protein_id=AAC74983.1;db_xref=GI:1788224;db_xref=ASAP:ABE-0006381;db_xref=UniProtKB/Swiss-Prot:P07026;db_xref=EcoGene:EG10935 EMBL gene 1997062 1997814 . - . ID=.4176;gene=yecC;locus_tag=b1917;gene_synonym=ECK1916;gene_synonym=JW1902;db_xref=EcoGene:EG12347 EMBL CDS 1997062 1997814 . - 0 ID=.4177;gene=yecC;locus_tag=b1917;gene_synonym=ECK1916;gene_synonym=JW1902;function=putative transport%3B Not classified;note=putative ATP-binding component of a transport system%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=putative ABC transporter ATPase;protein_id=AAC74984.1;db_xref=GI:1788225;db_xref=ASAP:ABE-0006384;db_xref=UniProtKB/Swiss-Prot:P37774;db_xref=EcoGene:EG12347 EMBL gene 1997811 1998479 . - . ID=.4178;gene=yecS;locus_tag=b1918;gene_synonym=ECK1917;gene_synonym=JW1903;db_xref=EcoGene:EG14037 EMBL CDS 1997811 1998479 . - 0 ID=.4179;gene=yecS;locus_tag=b1918;gene_synonym=ECK1917;gene_synonym=JW1903;function=putative transport%3B Not classified;note=putative transport system permease protein (former yecC)%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=ABC family putative inner membrane permease;protein_id=AAC74985.1;db_xref=GI:1788226;db_xref=ASAP:ABE-0006386;db_xref=UniProtKB/Swiss-Prot:P0AFT2;db_xref=EcoGene:EG14037 EMBL gene 1998494 1999480 . - . ID=.4180;gene=dcyD;locus_tag=b1919;gene_synonym=ECK1918;gene_synonym=JW5313;gene_synonym=yedO;db_xref=EcoGene:EG14038 EMBL CDS 1998494 1999480 . - 0 ID=.4181;gene=dcyD;locus_tag=b1919;gene_synonym=ECK1918;gene_synonym=JW5313;gene_synonym=yedO;ec_number=4.4.1.15;function=putative enzyme%3B Not classified;note=putative 1-aminocyclopropane-1-carboxylate deaminase;codon_start=1;transl_table=11;product=D-cysteine desulfhydrase%2C PLP-dependent;protein_id=AAC74986.2;db_xref=GI:87082000;db_xref=ASAP:ABE-0006389;db_xref=UniProtKB/Swiss-Prot:P76316;db_xref=EcoGene:EG14038 EMBL gene 1999585 2000385 . - . ID=.4182;gene=fliY;locus_tag=b1920;gene_synonym=ECK1919;gene_synonym=JW1905;gene_synonym=yzzR;db_xref=EcoGene:EG12680 EMBL CDS 1999585 2000385 . - 0 ID=.4183;gene=fliY;locus_tag=b1920;gene_synonym=ECK1919;gene_synonym=JW1905;gene_synonym=yzzR;function=putative transport%3B Not classified;note=putative periplasmic binding transport protein%3B periplasmic-binding component of ABC superfamily%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0019344 - cysteine biosynthetic process%3B GO_process: GO:0042883 - cysteine transport;codon_start=1;transl_table=11;product=cystine transporter subunit;protein_id=AAC74987.1;db_xref=GI:1788228;db_xref=ASAP:ABE-0006392;db_xref=UniProtKB/Swiss-Prot:P0AEM9;db_xref=EcoGene:EG12680 EMBL gene 2000473 2001024 . - . ID=.4184;gene=fliZ;locus_tag=b1921;gene_synonym=ECK1920;gene_synonym=JW1906;gene_synonym=yedH;db_xref=EcoGene:EG11356 EMBL CDS 2000473 2001024 . - 0 ID=.4185;gene=fliZ;locus_tag=b1921;gene_synonym=ECK1920;gene_synonym=JW1906;gene_synonym=yedH;function=structural component%3B Unknown;codon_start=1;transl_table=11;product=RpoS antagonist%3B putative regulator of FliA activity;protein_id=AAC74988.2;db_xref=GI:87082001;db_xref=ASAP:ABE-0006394;db_xref=UniProtKB/Swiss-Prot:P52627;db_xref=EcoGene:EG11356 EMBL gene 2001070 2001789 . - . ID=.4186;gene=fliA;locus_tag=b1922;gene_synonym=ECK1921;gene_synonym=flaD;gene_synonym=JW1907;gene_synonym=rpoF;db_xref=EcoGene:EG11355 EMBL CDS 2001070 2001789 . - 0 ID=.4187;gene=fliA;locus_tag=b1922;gene_synonym=ECK1921;gene_synonym=flaD;gene_synonym=JW1907;gene_synonym=rpoF;function=factor%3B Surface structures;note=flagellar biosynthesis%3B alternative sigma factor 28%3B regulation of flagellar operons%3B GO_component: GO:0019861 - flagellum%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006350 - transcription%3B GO_process: GO:0042330 - taxis;codon_start=1;transl_table=11;product=RNA polymerase%2C sigma 28 (sigma F) factor;protein_id=AAC74989.1;db_xref=GI:1788231;db_xref=ASAP:ABE-0006396;db_xref=UniProtKB/Swiss-Prot:P0AEM6;db_xref=EcoGene:EG11355 EMBL repeat_region 2001968 2002066 . + . ID=.4188;note=RIP141 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 2002110 2003606 . - . ID=.4189;gene=fliC;locus_tag=b1923;gene_synonym=ECK1922;gene_synonym=flaF;gene_synonym=H;gene_synonym=hag;gene_synonym=JW1908;db_xref=EcoGene:EG10321 EMBL CDS 2002110 2003606 . - 0 ID=.4190;gene=fliC;locus_tag=b1923;gene_synonym=ECK1922;gene_synonym=flaF;gene_synonym=H;gene_synonym=hag;gene_synonym=JW1908;function=structural component%3B Surface structures;note=flagellar biosynthesis%3B flagellin%2C filament structural protein%3B GO_component: GO:0019861 - flagellum%3B GO_process: GO:0009296 - flagellum assembly%3B GO_process: GO:0042330 - taxis;codon_start=1;transl_table=11;product=flagellar filament structural protein (flagellin);protein_id=AAC74990.1;db_xref=GI:1788232;db_xref=ASAP:ABE-0006402;db_xref=UniProtKB/Swiss-Prot:P04949;db_xref=EcoGene:EG10321 EMBL gene 2003872 2005278 . + . ID=.4191;gene=fliD;locus_tag=b1924;gene_synonym=ECK1923;gene_synonym=flbC;gene_synonym=JW1909;gene_synonym=rfs;db_xref=EcoGene:EG10841 EMBL CDS 2003872 2005278 . + 0 ID=.4192;gene=fliD;locus_tag=b1924;gene_synonym=ECK1923;gene_synonym=flbC;gene_synonym=JW1909;gene_synonym=rfs;function=putative structure%3B Surface structures;note=flagellar biosynthesis%3B filament capping protein%3B enables filament assembly%3B GO_component: GO:0019861 - flagellum%3B GO_process: GO:0009296 - flagellum assembly%3B GO_process: GO:0042330 - taxis;codon_start=1;transl_table=11;product=flagellar filament capping protein;protein_id=AAC74991.1;db_xref=GI:1788233;db_xref=ASAP:ABE-0006407;db_xref=UniProtKB/Swiss-Prot:P24216;db_xref=EcoGene:EG10841 EMBL gene 2005303 2005713 . + . ID=.4193;gene=fliS;locus_tag=b1925;gene_synonym=ECK1924;gene_synonym=JW1910;db_xref=EcoGene:EG11388 EMBL CDS 2005303 2005713 . + 0 ID=.4194;gene=fliS;locus_tag=b1925;gene_synonym=ECK1924;gene_synonym=JW1910;function=regulator%3B Surface structures;note=flagellar biosynthesis%3B repressor of class 3a and 3b operons (RflA activity)%3B GO_component: GO:0019861 - flagellum%3B GO_process: GO:0009296 - flagellum assembly%3B GO_process: GO:0042330 - taxis;codon_start=1;transl_table=11;product=flagellar protein potentiates polymerization;protein_id=AAC74992.1;db_xref=GI:1788234;db_xref=ASAP:ABE-0006409;db_xref=UniProtKB/Swiss-Prot:P26608;db_xref=EcoGene:EG11388 EMBL gene 2005713 2006078 . + . ID=.4195;gene=fliT;locus_tag=b1926;gene_synonym=ECK1925;gene_synonym=JW1911;db_xref=EcoGene:EG11389 EMBL CDS 2005713 2006078 . + 0 ID=.4196;gene=fliT;locus_tag=b1926;gene_synonym=ECK1925;gene_synonym=JW1911;function=regulator%3B Surface structures;note=flagellar biosynthesis%3B repressor of class 3a and 3b operons (RflA activity)%3B GO_component: GO:0019861 - flagellum%3B GO_process: GO:0009296 - flagellum assembly%3B GO_process: GO:0006457 - protein folding%3B GO_process: GO:0042330 - taxis;codon_start=1;transl_table=11;product=putative flagellar synthesis and assembly chaperone;protein_id=AAC74993.1;db_xref=GI:1788235;db_xref=ASAP:ABE-0006411;db_xref=UniProtKB/Swiss-Prot:P0ABY2;db_xref=EcoGene:EG11389 EMBL gene 2006156 2007643 . + . ID=.4197;gene=amyA;locus_tag=b1927;gene_synonym=ECK1926;gene_synonym=JW1912;gene_synonym=yedC;db_xref=EcoGene:EG11387 EMBL CDS 2006156 2007643 . + 0 ID=.4198;gene=amyA;locus_tag=b1927;gene_synonym=ECK1926;gene_synonym=JW1912;gene_synonym=yedC;ec_number=3.2.1.1;function=enzyme%3B Degradation of polysaccharides;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0000272 - polysaccharide catabolic process;codon_start=1;transl_table=11;product=cytoplasmic alpha-amylase;protein_id=AAC74994.1;db_xref=GI:1788236;db_xref=ASAP:ABE-0006414;db_xref=UniProtKB/Swiss-Prot:P26612;db_xref=EcoGene:EG11387 EMBL gene 2007677 2008090 . - . ID=.4199;gene=yedD;locus_tag=b1928;gene_synonym=ECK1927;gene_synonym=JW1913;db_xref=EcoGene:EG11659 EMBL CDS 2007677 2008090 . - 0 ID=.4200;gene=yedD;locus_tag=b1928;gene_synonym=ECK1927;gene_synonym=JW1913;codon_start=1;transl_table=11;product=lipoprotein;protein_id=AAC74995.1;db_xref=GI:1788237;db_xref=ASAP:ABE-0006416;db_xref=UniProtKB/Swiss-Prot:P31063;db_xref=EcoGene:EG11659 EMBL gene 2008277 2009482 . + . ID=.4201;gene=yedE;locus_tag=b1929;gene_synonym=ECK1928;gene_synonym=JW1914;db_xref=EcoGene:EG11660 EMBL CDS 2008277 2009482 . + 0 ID=.4202;gene=yedE;locus_tag=b1929;gene_synonym=ECK1928;gene_synonym=JW1914;function=putative transport%3B Not classified;note=putative transport system permease protein;codon_start=1;transl_table=11;product=UPF0394 family sulphur transport domain-containing inner membrane protein;protein_id=AAC74996.1;db_xref=GI:1788238;db_xref=ASAP:ABE-0006422;db_xref=UniProtKB/Swiss-Prot:P31064;db_xref=EcoGene:EG11660 EMBL gene 2009479 2009712 . + . ID=.4203;gene=yedF;locus_tag=b1930;gene_synonym=ECK1929;gene_synonym=JW1915;db_xref=EcoGene:EG11661 EMBL CDS 2009479 2009712 . + 0 ID=.4204;gene=yedF;locus_tag=b1930;gene_synonym=ECK1929;gene_synonym=JW1915;codon_start=1;transl_table=11;product=putative TusA family sulfurtransferase;protein_id=AAC74997.1;db_xref=GI:1788239;db_xref=ASAP:ABE-0006425;db_xref=UniProtKB/Swiss-Prot:P0AA31;db_xref=EcoGene:EG11661 EMBL gene 2009821 2010489 . + . ID=.4205;gene=yedK;locus_tag=b1931;gene_synonym=ECK1930;gene_synonym=JW1916;gene_synonym=yedG;db_xref=EcoGene:EG13278 EMBL CDS 2009821 2010489 . + 0 ID=.4206;gene=yedK;locus_tag=b1931;gene_synonym=ECK1930;gene_synonym=JW1916;gene_synonym=yedG;codon_start=1;transl_table=11;product=DUF159 family protein;protein_id=AAT48139.1;db_xref=GI:48994894;db_xref=ASAP:ABE-0006428;db_xref=UniProtKB/Swiss-Prot:P76318;db_xref=EcoGene:EG13278 EMBL gene 2010600 2011079 . + . ID=.4207;gene=yedL;locus_tag=b1932;gene_synonym=ECK1931;gene_synonym=JW1917;db_xref=EcoGene:EG13279 EMBL CDS 2010600 2011079 . + 0 ID=.4208;gene=yedL;locus_tag=b1932;gene_synonym=ECK1931;gene_synonym=JW1917;codon_start=1;transl_table=11;product=GNAT family putative N-acetyltransferase;protein_id=AAC74999.1;db_xref=GI:1788242;db_xref=ASAP:ABE-0006433;db_xref=UniProtKB/Swiss-Prot:P76319;db_xref=EcoGene:EG13279 EMBL gene 2011223 2012351 . - . ID=.4209;gene=yedN;locus_tag=b4495;gene_synonym=ECK1932;gene_synonym=JW1918;gene_synonym=JW5912;gene_synonym=yedM;pseudo=true;db_xref=EcoGene:EG13281 EMBL biological_region 2011223 2012351 . - 0 ID=.4210;featflags=type:CDS;gene=yedN;locus_tag=b4495;gene_synonym=ECK1932;gene_synonym=JW1918;gene_synonym=JW5912;gene_synonym=yedM;note=pseudogene%2C IpaH/YopM family;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0006435;db_xref=ASAP:ABE-0006437;db_xref=ASAP:ABE-0006440;db_xref=ASAP:ABE-0285096;db_xref=UniProtKB/Swiss-Prot:P76321;db_xref=EcoGene:EG13281 EMBL CDS 2011223 2011357 . - 0 Parent=.4210 EMBL CDS 2011363 2012040 . - 0 Parent=.4210 EMBL CDS 2012040 2012351 . - 0 Parent=.4210 EMBL gene 2012502 2012663 . + . ID=.4214;gene=intG;locus_tag=b1936;gene_synonym=ECK1934;gene_synonym=JW5913;pseudo=true;db_xref=EcoGene:EG14259 EMBL CDS 2012502 2012663 . + 0 ID=.4215;gene=intG;locus_tag=b1936;gene_synonym=ECK1934;gene_synonym=JW5913;note=pseudogene%2C phage integrase family;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0006445;db_xref=UniProtKB/Swiss-Prot:P76323;db_xref=EcoGene:EG14259 EMBL gene 2012700 2013014 . - . ID=.4216;gene=fliE;locus_tag=b1937;gene_synonym=ECK1935;gene_synonym=flaAI;gene_synonym=flaN;gene_synonym=JW1921;db_xref=EcoGene:EG11346 EMBL CDS 2012700 2013014 . - 0 ID=.4217;gene=fliE;locus_tag=b1937;gene_synonym=ECK1935;gene_synonym=flaAI;gene_synonym=flaN;gene_synonym=JW1921;function=structural component%3B Surface structures;note=flagellar biosynthesis%3B basal-body component%2C possibly at (MS-ring)-rod junction%3B GO_component: GO:0019861 - flagellum%3B GO_process: GO:0009296 - flagellum assembly%3B GO_process: GO:0042330 - taxis;codon_start=1;transl_table=11;product=flagellar basal-body component;protein_id=AAC75004.1;db_xref=GI:1788247;db_xref=ASAP:ABE-0006447;db_xref=UniProtKB/Swiss-Prot:P0A8T5;db_xref=EcoGene:EG11346 EMBL gene 2013229 2014887 . + . ID=.4218;gene=fliF;locus_tag=b1938;gene_synonym=ECK1936;gene_synonym=flaAII.1;gene_synonym=flaBI;gene_synonym=JW1922;db_xref=EcoGene:EG11347 EMBL CDS 2013229 2014887 . + 0 ID=.4219;gene=fliF;locus_tag=b1938;gene_synonym=ECK1936;gene_synonym=flaAII.1;gene_synonym=flaBI;gene_synonym=JW1922;function=structural component%3B Surface structures;note=flagellar biosynthesis%3B basal-body MS(membrane and supramembrane)-ring and collar protein%3B GO_component: GO:0019861 - flagellum%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009296 - flagellum assembly%3B GO_process: GO:0042330 - taxis;codon_start=1;transl_table=11;product=flagellar basal-body MS-ring and collar protein;protein_id=AAC75005.1;db_xref=GI:1788248;db_xref=ASAP:ABE-0006454;db_xref=UniProtKB/Swiss-Prot:P25798;db_xref=EcoGene:EG11347 EMBL gene 2014880 2015875 . + . ID=.4220;gene=fliG;locus_tag=b1939;gene_synonym=ECK1937;gene_synonym=flaAII.2;gene_synonym=flaBII;gene_synonym=JW1923;db_xref=EcoGene:EG11654 EMBL CDS 2014880 2015875 . + 0 ID=.4221;gene=fliG;locus_tag=b1939;gene_synonym=ECK1937;gene_synonym=flaAII.2;gene_synonym=flaBII;gene_synonym=JW1923;function=structural component%3B Surface structures;note=flagellar biosynthesis%2C component of motor switching and energizing%2C enabling rotation and determining its direction%3B GO_component: GO:0019861 - flagellum%3B GO_process: GO:0009296 - flagellum assembly%3B GO_process: GO:0042330 - taxis;codon_start=1;transl_table=11;product=flagellar motor switching and energizing component;protein_id=AAC75006.1;db_xref=GI:1788249;db_xref=ASAP:ABE-0006456;db_xref=UniProtKB/Swiss-Prot:P0ABZ1;db_xref=EcoGene:EG11654 EMBL gene 2015868 2016554 . + . ID=.4222;gene=fliH;locus_tag=b1940;gene_synonym=ECK1938;gene_synonym=flaAII.3;gene_synonym=flaBIII;gene_synonym=JW1924;db_xref=EcoGene:EG11656 EMBL CDS 2015868 2016554 . + 0 ID=.4223;gene=fliH;locus_tag=b1940;gene_synonym=ECK1938;gene_synonym=flaAII.3;gene_synonym=flaBIII;gene_synonym=JW1924;function=transport%3B Surface structures;note=flagellar biosynthesis%3B export of flagellar proteins?%3B GO_component: GO:0019861 - flagellum%3B GO_process: GO:0009296 - flagellum assembly%3B GO_process: GO:0042330 - taxis;codon_start=1;transl_table=11;product=negative regulator of FliI ATPase activity;protein_id=AAC75007.2;db_xref=GI:87082004;db_xref=ASAP:ABE-0006458;db_xref=UniProtKB/Swiss-Prot:P31068;db_xref=EcoGene:EG11656 EMBL gene 2016554 2017927 . + . ID=.4224;gene=fliI;locus_tag=b1941;gene_synonym=ECK1939;gene_synonym=flaC;gene_synonym=JW1925;db_xref=EcoGene:EG20266 EMBL CDS 2016554 2017927 . + 0 ID=.4225;gene=fliI;locus_tag=b1941;gene_synonym=ECK1939;gene_synonym=flaC;gene_synonym=JW1925;ec_number=3.6.3.14;function=enzyme%3B Surface structures;note=GO_component: GO:0019861 - flagellum%3B GO_process: GO:0015986 - ATP synthesis coupled proton transport;codon_start=1;transl_table=11;product=flagellum-specific ATP synthase;protein_id=AAC75008.1;db_xref=GI:1788251;db_xref=ASAP:ABE-0006460;db_xref=UniProtKB/Swiss-Prot:P52612;db_xref=EcoGene:EG20266 EMBL gene 2017946 2018389 . + . ID=.4226;gene=fliJ;locus_tag=b1942;gene_synonym=ECK1940;gene_synonym=flaO;gene_synonym=JW1926;db_xref=EcoGene:EG20267 EMBL CDS 2017946 2018389 . + 0 ID=.4227;gene=fliJ;locus_tag=b1942;gene_synonym=ECK1940;gene_synonym=flaO;gene_synonym=JW1926;function=structural component%3B Surface structures;note=flagellar fliJ protein%3B GO_component: GO:0019861 - flagellum%3B GO_process: GO:0009296 - flagellum assembly%3B GO_process: GO:0042330 - taxis;codon_start=1;transl_table=11;product=flagellar protein;protein_id=AAC75009.1;db_xref=GI:1788252;db_xref=ASAP:ABE-0006462;db_xref=UniProtKB/Swiss-Prot:P52613;db_xref=EcoGene:EG20267 EMBL gene 2018386 2019513 . + . ID=.4228;gene=fliK;locus_tag=b1943;gene_synonym=ECK1941;gene_synonym=flaE;gene_synonym=JW1927;db_xref=EcoGene:EG20268 EMBL CDS 2018386 2019513 . + 0 ID=.4229;gene=fliK;locus_tag=b1943;gene_synonym=ECK1941;gene_synonym=flaE;gene_synonym=JW1927;function=structural component%3B Surface structures;note=GO_component: GO:0019861 - flagellum%3B GO_process: GO:0009296 - flagellum assembly%3B GO_process: GO:0042330 - taxis;codon_start=1;transl_table=11;product=flagellar hook-length control protein;protein_id=AAC75010.1;db_xref=GI:1788253;db_xref=ASAP:ABE-0006464;db_xref=UniProtKB/Swiss-Prot:P52614;db_xref=EcoGene:EG20268 EMBL gene 2019618 2020082 . + . ID=.4230;gene=fliL;locus_tag=b1944;gene_synonym=cheC1;gene_synonym=ECK1942;gene_synonym=flaAI;gene_synonym=flaQI;gene_synonym=JW1928;db_xref=EcoGene:EG10322 EMBL CDS 2019618 2020082 . + 0 ID=.4231;gene=fliL;locus_tag=b1944;gene_synonym=cheC1;gene_synonym=ECK1942;gene_synonym=flaAI;gene_synonym=flaQI;gene_synonym=JW1928;function=putative structure%3B Surface structures;note=flagellar biosynthesis%3B GO_component: GO:0019861 - flagellum%3B GO_process: GO:0009296 - flagellum assembly%3B GO_process: GO:0042330 - taxis;codon_start=1;transl_table=11;product=flagellar biosynthesis protein;protein_id=AAC75011.1;db_xref=GI:1788254;db_xref=ASAP:ABE-0006467;db_xref=UniProtKB/Swiss-Prot:P0ABX8;db_xref=EcoGene:EG10322 EMBL gene 2020087 2021091 . + . ID=.4232;gene=fliM;locus_tag=b1945;gene_synonym=cheC2;gene_synonym=ECK1943;gene_synonym=flaA;gene_synonym=flaAII;gene_synonym=flaQII;gene_synonym=JW1929;db_xref=EcoGene:EG10323 EMBL CDS 2020087 2021091 . + 0 ID=.4233;gene=fliM;locus_tag=b1945;gene_synonym=cheC2;gene_synonym=ECK1943;gene_synonym=flaA;gene_synonym=flaAII;gene_synonym=flaQII;gene_synonym=JW1929;function=structural component%3B Surface structures;note=flagellar biosynthesis%2C component of motor switch and energizing%2C enabling rotation and determining its direction%3B GO_component: GO:0019861 - flagellum%3B GO_process: GO:0009296 - flagellum assembly%3B GO_process: GO:0042330 - taxis;codon_start=1;transl_table=11;product=flagellar motor switching and energizing component;protein_id=AAC75012.1;db_xref=GI:1788255;db_xref=ASAP:ABE-0006469;db_xref=UniProtKB/Swiss-Prot:P06974;db_xref=EcoGene:EG10323 EMBL gene 2021088 2021501 . + . ID=.4234;gene=fliN;locus_tag=b1946;gene_synonym=ECK1944;gene_synonym=JW1930;gene_synonym=motD;db_xref=EcoGene:EG10324 EMBL CDS 2021088 2021501 . + 0 ID=.4235;gene=fliN;locus_tag=b1946;gene_synonym=ECK1944;gene_synonym=JW1930;gene_synonym=motD;function=structural component%3B Surface structures;note=flagellar biosynthesis%2C component of motor switch and energizing%2C enabling rotation and determining its direction%3B GO_component: GO:0019861 - flagellum%3B GO_process: GO:0009296 - flagellum assembly%3B GO_process: GO:0042330 - taxis;codon_start=1;transl_table=11;product=flagellar motor switching and energizing component;protein_id=AAC75013.1;db_xref=GI:1788256;db_xref=ASAP:ABE-0006471;db_xref=UniProtKB/Swiss-Prot:P15070;db_xref=EcoGene:EG10324 EMBL gene 2021504 2021869 . + . ID=.4236;gene=fliO;locus_tag=b1947;gene_synonym=ECK1945;gene_synonym=flbD;gene_synonym=JW5316;db_xref=EcoGene:EG11224 EMBL CDS 2021504 2021869 . + 0 ID=.4237;gene=fliO;locus_tag=b1947;gene_synonym=ECK1945;gene_synonym=flbD;gene_synonym=JW5316;function=putative structure%3B Surface structures;note=flagellar biosynthesis%3B GO_component: GO:0019861 - flagellum%3B GO_process: GO:0009296 - flagellum assembly%3B GO_process: GO:0042330 - taxis;codon_start=1;transl_table=11;product=flagellar biosynthesis protein;protein_id=AAC75014.2;db_xref=GI:87082005;db_xref=ASAP:ABE-0006473;db_xref=UniProtKB/Swiss-Prot:P22586;db_xref=EcoGene:EG11224 EMBL gene 2021869 2022606 . + . ID=.4238;gene=fliP;locus_tag=b1948;gene_synonym=ECK1946;gene_synonym=flaR;gene_synonym=JW1932;db_xref=EcoGene:EG11975 EMBL CDS 2021869 2022606 . + 0 ID=.4239;gene=fliP;locus_tag=b1948;gene_synonym=ECK1946;gene_synonym=flaR;gene_synonym=JW1932;function=putative structure%3B Surface structures;note=flagellar biosynthesis%3B GO_component: GO:0019861 - flagellum%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_process: GO:0009296 - flagellum assembly%3B GO_process: GO:0042330 - taxis;codon_start=1;transl_table=11;product=flagellar biosynthesis protein;protein_id=AAC75015.1;db_xref=GI:1788259;db_xref=ASAP:ABE-0006475;db_xref=UniProtKB/Swiss-Prot:P0AC05;db_xref=EcoGene:EG11975 EMBL gene 2022616 2022885 . + . ID=.4240;gene=fliQ;locus_tag=b1949;gene_synonym=ECK1947;gene_synonym=flaQ;gene_synonym=JW1933;db_xref=EcoGene:EG11976 EMBL CDS 2022616 2022885 . + 0 ID=.4241;gene=fliQ;locus_tag=b1949;gene_synonym=ECK1947;gene_synonym=flaQ;gene_synonym=JW1933;function=putative structure%3B Surface structures;note=flagellar biosynthesis%3B GO_component: GO:0019861 - flagellum%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_process: GO:0009101 - glycoprotein biosynthetic process%3B GO_process: GO:0009296 - flagellum assembly;codon_start=1;transl_table=11;product=flagellar biosynthesis protein;protein_id=AAC75016.1;db_xref=GI:1788260;db_xref=ASAP:ABE-0006477;db_xref=UniProtKB/Swiss-Prot:P0AC07;db_xref=EcoGene:EG11976 EMBL gene 2022893 2023678 . + . ID=.4242;gene=fliR;locus_tag=b1950;gene_synonym=ECK1948;gene_synonym=flaP;gene_synonym=JW1934;db_xref=EcoGene:EG11977 EMBL CDS 2022893 2023678 . + 0 ID=.4243;gene=fliR;locus_tag=b1950;gene_synonym=ECK1948;gene_synonym=flaP;gene_synonym=JW1934;function=putative enzyme%3B Surface structures;note=flagellar biosynthesis%3B GO_component: GO:0019861 - flagellum%3B GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=flagellar export pore protein;protein_id=AAC75017.1;db_xref=GI:1788261;db_xref=ASAP:ABE-0006479;db_xref=UniProtKB/Swiss-Prot:P33135;db_xref=EcoGene:EG11977 EMBL gene 2023968 2024591 . + . ID=.4244;gene=rcsA;locus_tag=b1951;gene_synonym=cpsR;gene_synonym=ECK1949;gene_synonym=JW1935;db_xref=EcoGene:EG10820 EMBL CDS 2023968 2024591 . + 0 ID=.4245;gene=rcsA;locus_tag=b1951;gene_synonym=cpsR;gene_synonym=ECK1949;gene_synonym=JW1935;function=regulator%3B Surface polysaccharides %26 antigens;note=positive regulator for ctr capsule biosynthesis%2C positive transcription factor%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0009242 - colanic acid biosynthetic process%3B GO_process: GO:0009248 - K antigen biosynthetic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=transcriptional regulator of colanic acid capsular biosynthesis;protein_id=AAC75018.1;db_xref=GI:1788262;db_xref=ASAP:ABE-0006482;db_xref=UniProtKB/Swiss-Prot:P69405;db_xref=EcoGene:EG10820 EMBL gene 2024635 2024823 . - . ID=.4246;gene=dsrB;locus_tag=b1952;gene_synonym=ECK1950;gene_synonym=JW1936;db_xref=EcoGene:EG12636 EMBL CDS 2024635 2024823 . - 0 ID=.4247;gene=dsrB;locus_tag=b1952;gene_synonym=ECK1950;gene_synonym=JW1936;note=GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC75019.1;db_xref=GI:1788263;db_xref=ASAP:ABE-0006484;db_xref=UniProtKB/Swiss-Prot:P0AEG8;db_xref=EcoGene:EG12636 EMBL gene 2024986 2025213 . + . ID=.4248;gene=yodD;locus_tag=b1953;gene_synonym=ECK1951;gene_synonym=JW5317;db_xref=EcoGene:EG14387 EMBL CDS 2024986 2025213 . + 0 ID=.4249;gene=yodD;locus_tag=b1953;gene_synonym=ECK1951;gene_synonym=JW5317;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC75020.2;db_xref=GI:87082006;db_xref=ASAP:ABE-0006488;db_xref=UniProtKB/Swiss-Prot:P64519;db_xref=EcoGene:EG14387 EMBL gene 2025227 2025313 . - . ID=.4250;gene=dsrA;locus_tag=b1954;gene_synonym=ECK1952;gene_synonym=IS095;gene_synonym=JWR0036;db_xref=EcoGene:EG31118 EMBL ncRNA 2025227 2025313 . - . ID=.4251;ncrna_class=antisense_RNA;gene=dsrA;locus_tag=b1954;gene_synonym=ECK1952;gene_synonym=IS095;gene_synonym=JWR0036;product=sRNA antisense regulator enhances translation of RpoS%2C Hfq-dependent;note=silencer of rcsA gene%2C interacts with rpoS translation%3B component of acid resistance regulatory circuit;function=2.2.7 information transfer%3B RNA related%3B antisense RNA;function=3.1.3.6 regulation%3B type of regulation%3B posttranscriptional%3B antisense RNA;function=6.3 cell structure%3B surface antigens (ECA%2C O antigen of LPS);function=7.1 location of gene products%3B cytoplasm;function=regulatory RNA%3B regulates transcriptional silencing by H-NS protein%2C and enhances translation of RpoS;function=RNA%3B Surface polysaccharides %26 antigens;db_xref=ASAP:ABE-0006490;db_xref=EcoGene:EG31118 EMBL gene 2025511 2026326 . + . ID=.4252;gene=yedP;locus_tag=b1955;gene_synonym=ECK1953;gene_synonym=JW1938;db_xref=EcoGene:EG14039 EMBL CDS 2025511 2026326 . + 0 ID=.4253;gene=yedP;locus_tag=b1955;gene_synonym=ECK1953;gene_synonym=JW1938;codon_start=1;transl_table=11;product=putative mannosyl-3-phosphoglycerate phosphatase;protein_id=AAC75021.1;db_xref=GI:1788265;db_xref=ASAP:ABE-0006493;db_xref=UniProtKB/Swiss-Prot:P76329;db_xref=EcoGene:EG14039 EMBL gene 2026323 2028017 . - . ID=.4254;gene=yedQ;locus_tag=b1956;gene_synonym=ECK1954;gene_synonym=JW5832;db_xref=EcoGene:EG14040 EMBL CDS 2026323 2028017 . - 0 ID=.4255;gene=yedQ;locus_tag=b1956;gene_synonym=ECK1954;gene_synonym=JW5832;codon_start=1;transl_table=11;product=putative membrane-anchored diguanylate cyclase;protein_id=AAC75022.2;db_xref=GI:87082007;db_xref=ASAP:ABE-0006495;db_xref=UniProtKB/Swiss-Prot:P76330;db_xref=EcoGene:EG14040 EMBL gene 2028188 2028370 . - . ID=.4256;gene=yodC;locus_tag=b1957;gene_synonym=ECK1955;gene_synonym=JW1940;db_xref=EcoGene:EG14307 EMBL CDS 2028188 2028370 . - 0 ID=.4257;gene=yodC;locus_tag=b1957;gene_synonym=ECK1955;gene_synonym=JW1940;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC75023.1;db_xref=GI:1788267;db_xref=ASAP:ABE-0006498;db_xref=UniProtKB/Swiss-Prot:P64517;db_xref=EcoGene:EG14307 EMBL gene 2028449 2029366 . - . ID=.4258;gene=yedI;locus_tag=b1958;gene_synonym=ECK1956;gene_synonym=JW1941;db_xref=EcoGene:EG12709 EMBL CDS 2028449 2029366 . - 0 ID=.4259;gene=yedI;locus_tag=b1958;gene_synonym=ECK1956;gene_synonym=JW1941;note=GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=DUF808 family inner membrane protein;protein_id=AAC75024.1;db_xref=GI:1788268;db_xref=ASAP:ABE-0006500;db_xref=UniProtKB/Swiss-Prot:P46125;db_xref=EcoGene:EG12709 EMBL gene 2029539 2030459 . + . ID=.4260;gene=yedA;locus_tag=b1959;gene_synonym=ECK1957;gene_synonym=JW1942;db_xref=EcoGene:EG11141 EMBL CDS 2029539 2030459 . + 0 ID=.4261;gene=yedA;locus_tag=b1959;gene_synonym=ECK1957;gene_synonym=JW1942;function=putative membrane%3B Not classified;note=putative transmembrane subunit%3B GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=amino acid exporter for phenylalanine%2C threonine;protein_id=AAC75025.1;db_xref=GI:1788269;db_xref=ASAP:ABE-0006505;db_xref=UniProtKB/Swiss-Prot:P0AA70;db_xref=EcoGene:EG11141 EMBL gene 2030448 2030918 . - . ID=.4262;gene=vsr;locus_tag=b1960;gene_synonym=ECK1958;gene_synonym=JW1943;db_xref=EcoGene:EG11068 EMBL CDS 2030448 2030918 . - 0 ID=.4263;gene=vsr;locus_tag=b1960;gene_synonym=ECK1958;gene_synonym=JW1943;ec_number=3.1.-.-;function=enzyme%3B Degradation of DNA;note=DNA mismatch endonuclease%2C patch repair protein%3B GO_process: GO:0006308 - DNA catabolic process%3B GO_process: GO:0006281 - DNA repair;codon_start=1;transl_table=11;product=DNA mismatch endonuclease of very short patch repair;protein_id=AAC75026.1;db_xref=GI:1788270;db_xref=ASAP:ABE-0006507;db_xref=UniProtKB/Swiss-Prot:P09184;db_xref=EcoGene:EG11068 EMBL gene 2030899 2032317 . - . ID=.4264;gene=dcm;locus_tag=b1961;gene_synonym=ECK1959;gene_synonym=JW1944;gene_synonym=mec;db_xref=EcoGene:EG10211 EMBL CDS 2030899 2032317 . - 0 ID=.4265;gene=dcm;locus_tag=b1961;gene_synonym=ECK1959;gene_synonym=JW1944;gene_synonym=mec;ec_number=2.1.1.37;function=enzyme%3B DNA - replication%2C repair%2C restriction/modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006306 - DNA methylation;codon_start=1;transl_table=11;product=DNA cytosine methyltransferase;protein_id=AAC75027.1;db_xref=GI:1788271;db_xref=ASAP:ABE-0006509;db_xref=UniProtKB/Swiss-Prot:P0AED9;db_xref=EcoGene:EG10211 EMBL gene 2032384 2033079 . - . ID=.4266;gene=yedJ;locus_tag=b1962;gene_synonym=ECK1960;gene_synonym=JW1945;db_xref=EcoGene:EG12710 EMBL CDS 2032384 2033079 . - 0 ID=.4267;gene=yedJ;locus_tag=b1962;gene_synonym=ECK1960;gene_synonym=JW1945;codon_start=1;transl_table=11;product=putative HD superfamily phosphohydrolase;protein_id=AAC75028.1;db_xref=GI:1788273;db_xref=ASAP:ABE-0006512;db_xref=UniProtKB/Swiss-Prot:P46144;db_xref=EcoGene:EG12710 EMBL gene 2033119 2033484 . - . ID=.4268;gene=yedR;locus_tag=b1963;gene_synonym=ECK1961;gene_synonym=JW1946;db_xref=EcoGene:EG14041 EMBL CDS 2033119 2033484 . - 0 ID=.4269;gene=yedR;locus_tag=b1963;gene_synonym=ECK1961;gene_synonym=JW1946;codon_start=1;transl_table=11;product=inner membrane protein;protein_id=AAC75029.2;db_xref=GI:87082008;db_xref=ASAP:ABE-0006514;db_xref=UniProtKB/Swiss-Prot:P76334;db_xref=EcoGene:EG14041 EMBL gene 2033649 2033739 . + . ID=.4270;gene=rseX;locus_tag=b4603;gene_synonym=ECK4412;gene_synonym=IS96;db_xref=EcoGene:EG31170 EMBL ncRNA 2033649 2033739 . + . ID=.4271;ncrna_class=antisense_RNA;gene=rseX;locus_tag=b4603;gene_synonym=ECK4412;gene_synonym=IS96;product=sRNA antisense regulator of ompA and ompC translation%2C Hfq-dependent;db_xref=EcoGene:EG31170 EMBL gene 2034051 2035243 . + . ID=.4272;gene=yedS;locus_tag=b4496;gene_synonym=ECK1962;gene_synonym=JW1948;gene_synonym=JW1949;gene_synonym=JW5319;gene_synonym=yedT;pseudo=true;db_xref=EcoGene:EG14042 EMBL biological_region 2034051 2035243 . + 0 ID=.4273;featflags=type:CDS;gene=yedS;locus_tag=b4496;gene_synonym=ECK1962;gene_synonym=JW1948;gene_synonym=JW1949;gene_synonym=JW5319;gene_synonym=yedT;note=pseudogene%2C outer membrane protein homology%3B putative outer membrane protein;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0006518;db_xref=ASAP:ABE-0006521;db_xref=ASAP:ABE-0006526;db_xref=ASAP:ABE-0285097;db_xref=UniProtKB/Swiss-Prot:P76335;db_xref=EcoGene:EG14042 EMBL CDS 2034051 2034713 . + 0 Parent=.4273 EMBL CDS 2034713 2035243 . + 0 Parent=.4273 EMBL gene 2035835 2036686 . + . ID=.4276;gene=hchA;locus_tag=b1967;gene_synonym=ECK1963;gene_synonym=gloC;gene_synonym=JW1950;gene_synonym=yedU;gene_synonym=yzzC;db_xref=EcoGene:EG11755 EMBL CDS 2035835 2036686 . + 0 ID=.4277;gene=hchA;locus_tag=b1967;gene_synonym=ECK1963;gene_synonym=gloC;gene_synonym=JW1950;gene_synonym=yedU;gene_synonym=yzzC;codon_start=1;transl_table=11;product=glyoxalase III and Hsp31 molecular chaperone;protein_id=AAC75033.1;db_xref=GI:1788278;db_xref=ASAP:ABE-0006529;db_xref=UniProtKB/Swiss-Prot:P31658;db_xref=EcoGene:EG11755 EMBL gene 2036794 2038152 . - . ID=.4278;gene=yedV;locus_tag=b1968;gene_synonym=ECK1964;gene_synonym=JW1951;db_xref=EcoGene:EG14044 EMBL CDS 2036794 2038152 . - 0 ID=.4279;gene=yedV;locus_tag=b1968;gene_synonym=ECK1964;gene_synonym=JW1951;function=putative regulator%3B Not classified;note=putative 2-component sensor protein%3B GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=putative sensory kinase in two-component regulatory system with YedW;protein_id=AAC75034.1;db_xref=GI:1788279;db_xref=ASAP:ABE-0006531;db_xref=UniProtKB/Swiss-Prot:P76339;db_xref=EcoGene:EG14044 EMBL gene 2038152 2038823 . - . ID=.4280;gene=yedW;locus_tag=b1969;gene_synonym=ECK1965;gene_synonym=JW5322;db_xref=EcoGene:EG14045 EMBL CDS 2038152 2038823 . - 0 ID=.4281;gene=yedW;locus_tag=b1969;gene_synonym=ECK1965;gene_synonym=JW5322;function=putative regulator%3B Not classified;note=putative 2-component transcriptional regulator%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=response regulator family protein;protein_id=AAC75035.2;db_xref=GI:87082012;db_xref=ASAP:ABE-0006533;db_xref=UniProtKB/Swiss-Prot:P76340;db_xref=EcoGene:EG14045 EMBL gene 2038956 2039369 . + . ID=.4282;gene=hiuH;locus_tag=b1970;gene_synonym=ECK1966;gene_synonym=JW1953;gene_synonym=yedX;db_xref=EcoGene:EG14046 EMBL CDS 2038956 2039369 . + 0 ID=.4283;gene=hiuH;locus_tag=b1970;gene_synonym=ECK1966;gene_synonym=JW1953;gene_synonym=yedX;function=enzyme%3B Purine catabolism;codon_start=1;transl_table=11;product=hydroxyisourate hydrolase;protein_id=AAC75036.1;db_xref=GI:1788281;db_xref=ASAP:ABE-0006537;db_xref=UniProtKB/Swiss-Prot:P76341;db_xref=EcoGene:EG14046 EMBL gene 2039478 2040482 . + . ID=.4284;gene=yedY;locus_tag=b1971;gene_synonym=ECK1967;gene_synonym=JW1954;db_xref=EcoGene:EG14047 EMBL CDS 2039478 2040482 . + 0 ID=.4285;gene=yedY;locus_tag=b1971;gene_synonym=ECK1967;gene_synonym=JW1954;function=putative enzyme%3B Not classified;note=putative reductase;codon_start=1;transl_table=11;product=membrane-anchored%2C periplasmic TMAO%2C DMSO reductase;protein_id=AAC75037.1;db_xref=GI:1788282;db_xref=ASAP:ABE-0006540;db_xref=UniProtKB/Swiss-Prot:P76342;db_xref=EcoGene:EG14047 EMBL gene 2040483 2041118 . + . ID=.4286;gene=yedZ;locus_tag=b1972;gene_synonym=ECK1968;gene_synonym=JW1955;db_xref=EcoGene:EG14048 EMBL CDS 2040483 2041118 . + 0 ID=.4287;gene=yedZ;locus_tag=b1972;gene_synonym=ECK1968;gene_synonym=JW1955;codon_start=1;transl_table=11;product=inner membrane heme subunit for periplasmic YedYZ reductase;protein_id=AAC75038.1;db_xref=GI:1788283;db_xref=ASAP:ABE-0006542;db_xref=UniProtKB/Swiss-Prot:P76343;db_xref=EcoGene:EG14048 EMBL repeat_region 2041152 2041185 . + . ID=.4288;note=REP142 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 2041375 2042025 . + . ID=.4289;gene=zinT;locus_tag=b1973;gene_synonym=ECK1969;gene_synonym=JW1956;gene_synonym=yodA;db_xref=EcoGene:EG14049 EMBL CDS 2041375 2042025 . + 0 ID=.4290;gene=zinT;locus_tag=b1973;gene_synonym=ECK1969;gene_synonym=JW1956;gene_synonym=yodA;codon_start=1;transl_table=11;product=zinc and cadmium binding protein%2C periplasmic;protein_id=AAC75039.1;db_xref=GI:1788284;db_xref=ASAP:ABE-0006546;db_xref=UniProtKB/Swiss-Prot:P76344;db_xref=EcoGene:EG14049 EMBL gene 2042368 2042898 . + . ID=.4291;gene=yodB;locus_tag=b1974;gene_synonym=ECK1970;gene_synonym=JW5323;db_xref=EcoGene:EG14050 EMBL CDS 2042368 2042898 . + 0 ID=.4292;gene=yodB;locus_tag=b1974;gene_synonym=ECK1970;gene_synonym=JW5323;function=putative enzyme%3B Not classified;note=cytochrome b561 homolog 1%3B GO_process: GO:0017004 - cytochrome complex assembly;codon_start=1;transl_table=11;product=cytochrome b561 homolog;protein_id=AAC75040.2;db_xref=GI:87082013;db_xref=ASAP:ABE-0006552;db_xref=UniProtKB/Swiss-Prot:P76345;db_xref=EcoGene:EG14050 EMBL gene 2043468 2043557 . - . ID=.4293;gene=serU;locus_tag=b1975;gene_synonym=ECK1971;gene_synonym=ftsM;gene_synonym=JWR0037;gene_synonym=Su-1;gene_synonym=su1;gene_synonym=supD;gene_synonym=supH;db_xref=EcoGene:EG30094 EMBL tRNA 2043468 2043557 . - . ID=.4294;gene=serU;locus_tag=b1975;gene_synonym=ECK1971;gene_synonym=ftsM;gene_synonym=JWR0037;gene_synonym=Su-1;gene_synonym=su1;gene_synonym=supD;gene_synonym=supH;product=tRNA-Ser;note=anticodon: CGA;db_xref=ASAP:ABE-0006554;db_xref=EcoGene:EG30094 EMBL gene 2043651 2044448 . + . ID=.4295;gene=mtfA;locus_tag=b1976;gene_synonym=ECK1972;gene_synonym=JW1958;gene_synonym=yeeI;db_xref=EcoGene:EG13377 EMBL CDS 2043651 2044448 . + 0 ID=.4296;gene=mtfA;locus_tag=b1976;gene_synonym=ECK1972;gene_synonym=JW1958;gene_synonym=yeeI;codon_start=1;transl_table=11;product=anti-repressor for DgsA(Mlc);protein_id=AAC75041.2;db_xref=GI:87082014;db_xref=ASAP:ABE-0006558;db_xref=UniProtKB/Swiss-Prot:P76346;db_xref=EcoGene:EG13377 EMBL gene 2044549 2044624 . + . ID=.4297;gene=asnT;locus_tag=b1977;gene_synonym=ECK1973;gene_synonym=JWR0038;db_xref=EcoGene:EG30020 EMBL tRNA 2044549 2044624 . + . ID=.4298;gene=asnT;locus_tag=b1977;gene_synonym=ECK1973;gene_synonym=JWR0038;product=tRNA-Asn;note=anticodon: GUU;db_xref=ASAP:ABE-0006560;db_xref=EcoGene:EG30020 EMBL gene 2044938 2052014 . + . ID=.4299;gene=yeeJ;locus_tag=b1978;gene_synonym=ECK1974;gene_synonym=JW5833;db_xref=EcoGene:EG13378 EMBL CDS 2044938 2052014 . + 0 ID=.4300;gene=yeeJ;locus_tag=b1978;gene_synonym=ECK1974;gene_synonym=JW5833;function=putative factor%3B Not classified;note=putative factor%3B GO_process: GO:0006355 - regulation of transcription%2C DNA-dependent;codon_start=1;transl_table=11;product=putative adhesin;protein_id=AAC75042.4;db_xref=GI:145693153;db_xref=ASAP:ABE-0006563;db_xref=UniProtKB/Swiss-Prot:P76347;db_xref=EcoGene:EG13378 EMBL gene 2052276 2053328 . - . ID=.4301;gene=yeeL;locus_tag=b4497;gene_synonym=ECK1975;gene_synonym=JW1961;gene_synonym=JW5325;gene_synonym=yeeK;pseudo=true;db_xref=EcoGene:EG13380 EMBL CDS 2052276 2053328 . - 0 ID=.4302;gene=yeeL;locus_tag=b4497;gene_synonym=ECK1975;gene_synonym=JW1961;gene_synonym=JW5325;gene_synonym=yeeK;note=pseudogene%2C glycosyltransferase homology;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0006565;db_xref=ASAP:ABE-0006568;db_xref=ASAP:ABE-0285098;db_xref=UniProtKB/Swiss-Prot:P76349;db_xref=EcoGene:EG13380 EMBL gene 2053643 2054959 . + . ID=.4303;gene=shiA;locus_tag=b1981;gene_synonym=ECK1976;gene_synonym=JW1962;gene_synonym=yeeM;db_xref=EcoGene:EG20205 EMBL CDS 2053643 2054959 . + 0 ID=.4304;gene=shiA;locus_tag=b1981;gene_synonym=ECK1976;gene_synonym=JW1962;gene_synonym=yeeM;function=putative transport%3B Not classified;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009423 - chorismate biosynthetic process;codon_start=1;transl_table=11;product=shikimate transporter;protein_id=AAC75045.1;db_xref=GI:1788292;db_xref=ASAP:ABE-0006572;db_xref=UniProtKB/Swiss-Prot:P76350;db_xref=EcoGene:EG20205 EMBL gene 2055061 2056515 . + . ID=.4305;gene=amn;locus_tag=b1982;gene_synonym=ECK1977;gene_synonym=JW1963;db_xref=EcoGene:EG10039 EMBL CDS 2055061 2056515 . + 0 ID=.4306;gene=amn;locus_tag=b1982;gene_synonym=ECK1977;gene_synonym=JW1963;ec_number=3.2.2.4;function=enzyme%3B Salvage of nucleosides and nucleotides;experiment=N-terminus verified by Edman degradation: PMID 2690948;note=GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion;codon_start=1;transl_table=11;product=AMP nucleosidase;protein_id=AAC75046.1;db_xref=GI:1788293;db_xref=ASAP:ABE-0006579;db_xref=UniProtKB/Swiss-Prot:P0AE12;db_xref=EcoGene:EG10039 EMBL gene 2056858 2057574 . + . ID=.4307;gene=yeeN;locus_tag=b1983;gene_synonym=ECK1978;gene_synonym=JW1964;db_xref=EcoGene:EG13382 EMBL CDS 2056858 2057574 . + 0 ID=.4308;gene=yeeN;locus_tag=b1983;gene_synonym=ECK1978;gene_synonym=JW1964;codon_start=1;transl_table=11;product=UPF0082 family protein;protein_id=AAC75047.1;db_xref=GI:1788294;db_xref=ASAP:ABE-0006582;db_xref=UniProtKB/Swiss-Prot:P0A8A2;db_xref=EcoGene:EG13382 EMBL gene 2058027 2058102 . - . ID=.4309;gene=asnW;locus_tag=b1984;gene_synonym=ECK1979;gene_synonym=JWR0039;db_xref=EcoGene:EG31120 EMBL tRNA 2058027 2058102 . - . ID=.4310;gene=asnW;locus_tag=b1984;gene_synonym=ECK1979;gene_synonym=JWR0039;product=tRNA-Asn;note=anticodon: GUU;db_xref=ASAP:ABE-0006584;db_xref=EcoGene:EG31120 EMBL gene 2058203 2059690 . - . ID=.4311;gene=yeeO;locus_tag=b1985;gene_synonym=ECK1980;gene_synonym=JW1965;db_xref=EcoGene:EG13383 EMBL CDS 2058203 2059690 . - 0 ID=.4312;gene=yeeO;locus_tag=b1985;gene_synonym=ECK1980;gene_synonym=JW1965;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative multdrug exporter%2C MATE family;protein_id=AAC75048.2;db_xref=GI:226510954;db_xref=ASAP:ABE-0006586;db_xref=UniProtKB/Swiss-Prot:P76352;db_xref=EcoGene:EG13383 EMBL gene 2059851 2059926 . + . ID=.4313;gene=asnU;locus_tag=b1986;gene_synonym=ECK1981;gene_synonym=JWR0040;db_xref=EcoGene:EG30021 EMBL tRNA 2059851 2059926 . + . ID=.4314;gene=asnU;locus_tag=b1986;gene_synonym=ECK1981;gene_synonym=JWR0040;product=tRNA-Asn;note=anticodon: GUU;db_xref=ASAP:ABE-0006588;db_xref=EcoGene:EG30021 EMBL gene 2059964 2060914 . - . ID=.4315;gene=cbl;locus_tag=b1987;gene_synonym=ECK1982;gene_synonym=JW1966;db_xref=EcoGene:EG14264 EMBL CDS 2059964 2060914 . - 0 ID=.4316;gene=cbl;locus_tag=b1987;gene_synonym=ECK1982;gene_synonym=JW1966;function=regulator%3B Amino acid biosynthesis: Cysteine;note=transcriptional regulator cys regulon%3B accessory regulatory circuit affecting cysM%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0019344 - cysteine biosynthetic process%3B GO_process: GO:0006790 - sulfur metabolic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=ssuEADCB/tauABCD operon transcriptional activator;protein_id=AAC75049.1;db_xref=GI:1788296;db_xref=ASAP:ABE-0006590;db_xref=UniProtKB/Swiss-Prot:Q47083;db_xref=EcoGene:EG14264 EMBL gene 2061016 2061933 . - . ID=.4317;gene=nac;locus_tag=b1988;gene_synonym=ECK1983;gene_synonym=JW1967;db_xref=EcoGene:EG14265 EMBL CDS 2061016 2061933 . - 0 ID=.4318;gene=nac;locus_tag=b1988;gene_synonym=ECK1983;gene_synonym=JW1967;function=regulator%3B Central intermediary metabolism;note=nitrogen assimilation control protein%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0006807 - nitrogen compound metabolic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=nitrogen assimilation regulon transcriptional regulator%3B autorepressor;protein_id=AAC75050.1;db_xref=GI:1788297;db_xref=ASAP:ABE-0006594;db_xref=UniProtKB/Swiss-Prot:Q47005;db_xref=EcoGene:EG14265 EMBL gene 2062260 2062335 . + . ID=.4319;gene=asnV;locus_tag=b1989;gene_synonym=ECK1984;gene_synonym=JWR0041;db_xref=EcoGene:EG30022 EMBL tRNA 2062260 2062335 . + . ID=.4320;gene=asnV;locus_tag=b1989;gene_synonym=ECK1984;gene_synonym=JWR0041;product=tRNA-Asn;note=anticodon: GUU;db_xref=ASAP:ABE-0006605;db_xref=EcoGene:EG30022 EMBL gene 2062391 2063323 . - . ID=.4321;gene=ldtA;locus_tag=b1990;gene_synonym=ECK1985;gene_synonym=erfK;gene_synonym=JW1968;gene_synonym=srfK;gene_synonym=yeeG;gene_synonym=yzzT;db_xref=EcoGene:EG12682 EMBL CDS 2062391 2063323 . - 0 ID=.4322;gene=ldtA;locus_tag=b1990;gene_synonym=ECK1985;gene_synonym=erfK;gene_synonym=JW1968;gene_synonym=srfK;gene_synonym=yeeG;gene_synonym=yzzT;function=enzyme%3B Murein sacculus%2C peptidoglycan;codon_start=1;transl_table=11;product=L%2CD-transpeptidase linking Lpp to murein;protein_id=AAC75051.1;db_xref=GI:1788299;db_xref=ASAP:ABE-0006607;db_xref=UniProtKB/Swiss-Prot:P39176;db_xref=EcoGene:EG12682 EMBL gene 2063388 2064467 . - . ID=.4323;gene=cobT;locus_tag=b1991;gene_synonym=ECK1986;gene_synonym=JW1969;db_xref=EcoGene:EG12151 EMBL CDS 2063388 2064467 . - 0 ID=.4324;gene=cobT;locus_tag=b1991;gene_synonym=ECK1986;gene_synonym=JW1969;ec_number=2.4.2.21;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Cobalamin;codon_start=1;transl_table=11;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=AAC75052.1;db_xref=GI:1788300;db_xref=ASAP:ABE-0006611;db_xref=UniProtKB/Swiss-Prot:P36562;db_xref=EcoGene:EG12151 EMBL gene 2064479 2065222 . - . ID=.4325;gene=cobS;locus_tag=b1992;gene_synonym=ECK1987;gene_synonym=JW1970;db_xref=EcoGene:EG12150 EMBL CDS 2064479 2065222 . - 0 ID=.4326;gene=cobS;locus_tag=b1992;gene_synonym=ECK1987;gene_synonym=JW1970;ec_number=2.-.-.-;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Cobalamin;codon_start=1;transl_table=11;product=cobalamin synthase;protein_id=AAC75053.1;db_xref=GI:1788301;db_xref=ASAP:ABE-0006613;db_xref=UniProtKB/Swiss-Prot:P36561;db_xref=EcoGene:EG12150 EMBL gene 2065219 2065764 . - . ID=.4327;gene=cobU;locus_tag=b1993;gene_synonym=ECK1988;gene_synonym=JW1971;db_xref=EcoGene:EG13238 EMBL CDS 2065219 2065764 . - 0 ID=.4328;gene=cobU;locus_tag=b1993;gene_synonym=ECK1988;gene_synonym=JW1971;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Cobalamin;note=cobinamide kinase/cobinamide phosphate guanylyltransferase;codon_start=1;transl_table=11;product=cobinamide kinase and cobinamide phosphate guanylyltransferase;protein_id=AAC75054.1;db_xref=GI:1788302;db_xref=ASAP:ABE-0006616;db_xref=UniProtKB/Swiss-Prot:P0AE76;db_xref=EcoGene:EG13238 EMBL gene 2066068 2066154 . - . ID=.4329;gene=yeeH;locus_tag=b4639;gene_synonym=ECK4437;pseudo=true;db_xref=EcoGene:EG13239 EMBL CDS 2066068 2066154 . - 0 ID=.4330;gene=yeeH;locus_tag=b4639;gene_synonym=ECK4437;note=pseudogene;pseudo=true;codon_start=1;transl_table=11;db_xref=EcoGene:EG13239 EMBL sequence_feature 2066159 2067353 . - . ID=.4331;note=*mobile_element_type: insertion sequence:IS5H EMBL gene 2066305 2067321 . - . ID=.4332;gene=insH1;locus_tag=b1994;gene_synonym=ECK0261;db_xref=EcoGene:EG40008 EMBL CDS 2066305 2067321 . - 0 ID=.4333;gene=insH1;locus_tag=b1994;gene_synonym=ECK0261;function=IS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;codon_start=1;transl_table=11;product=IS5 transposase and trans-activator;protein_id=AAC75055.1;db_xref=GI:1788303;db_xref=ASAP:ABE-0006619;db_xref=UniProtKB/Swiss-Prot:P0CE53;db_xref=EcoGene:EG40008 EMBL sequence_feature 2067354 2079031 . + . ID=.4334;note=cryptic prophage CP4-44 EMBL gene 2067360 2067892 . - . ID=.4335;gene=yoeG;locus_tag=b4640;gene_synonym=ECK4451;pseudo=true;db_xref=EcoGene:EG14440 EMBL biological_region 2067360 2067892 . - 0 ID=.4336;featflags=type:CDS;gene=yoeG;locus_tag=b4640;gene_synonym=ECK4451;note=pseudogene%2C CP4-44 putative prophage remnant%3BPhage or Prophage Related;pseudo=true;codon_start=1;transl_table=11;db_xref=EcoGene:EG14440 EMBL CDS 2067360 2067458 . - 0 Parent=.4336 EMBL CDS 2067458 2067892 . - 0 Parent=.4336 EMBL gene 2068261 2068419 . - . ID=.4339;gene=yoeH;locus_tag=b4641;gene_synonym=ECK4452;pseudo=true;db_xref=EcoGene:EG14441 EMBL CDS 2068261 2068419 . - 0 ID=.4340;gene=yoeH;locus_tag=b4641;gene_synonym=ECK4452;note=pseudogene%2C CP4-44 putative prophage remnant%3BPhage or Prophage Related;pseudo=true;codon_start=1;transl_table=11;db_xref=EcoGene:EG14441 EMBL biological_region 2068635 2070474 . + . ID=.4341;featflags=type:gene;gene=yoeA;locus_tag=b4582;gene_synonym=ECK1989;gene_synonym=JW5326;gene_synonym=yoeE;pseudo=true;db_xref=EcoGene:EG14308 EMBL gene 2068635 2068940 . + . Parent=.4341 EMBL gene 2070277 2070474 . + . Parent=.4341 EMBL biological_region 2068635 2070474 . + 0 ID=.4344;featflags=type:CDS;gene=yoeA;locus_tag=b4582;gene_synonym=ECK1989;gene_synonym=JW5326;gene_synonym=yoeE;note=CP4-44 prophage%3B putative disrupted hemin or colicin receptor%3BPhage or Prophage Related%3B interrupted by IS2 and C-terminal deletion;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0006626;db_xref=ASAP:ABE-0006636;db_xref=ASAP:ABE-0285114;db_xref=UniProtKB/Swiss-Prot:P76356;db_xref=EcoGene:EG14308 EMBL CDS 2068635 2068940 . + 0 Parent=.4344 EMBL CDS 2070277 2070474 . + 0 Parent=.4344 EMBL sequence_feature 2068941 2070271 . - . ID=.4347;note=*mobile_element_type: insertion sequence:IS2F EMBL gene 2068952 2069857 . - . ID=.4348;gene=insD1;locus_tag=b1996;gene_synonym=ECK0358;db_xref=EcoGene:EG40004 EMBL CDS 2068952 2069857 . - 0 ID=.4349;gene=insD1;locus_tag=b1996;gene_synonym=ECK0358;function=IS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;codon_start=1;transl_table=11;product=IS2 transposase TnpB;protein_id=AAC75057.1;db_xref=GI:1788305;db_xref=ASAP:ABE-0006629;db_xref=UniProtKB/Swiss-Prot:P0CF55;db_xref=EcoGene:EG40004 EMBL gene 2069815 2070180 . - . ID=.4350;gene=insC1;locus_tag=b1997;gene_synonym=ECK0357;db_xref=EcoGene:EG40003 EMBL CDS 2069815 2070180 . - 0 ID=.4351;gene=insC1;locus_tag=b1997;gene_synonym=ECK0357;function=IS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;codon_start=1;transl_table=11;product=IS2 repressor TnpA;protein_id=AAT48140.2;db_xref=GI:145693154;db_xref=ASAP:ABE-0006631;db_xref=UniProtKB/Swiss-Prot:P0CF42;db_xref=EcoGene:EG40003 EMBL gene 2070660 2071211 . + . ID=.4352;gene=yeeP;locus_tag=b1999;gene_synonym=ECK1991;gene_synonym=JW5327;pseudo=true;db_xref=EcoGene:EG13384 EMBL CDS 2070660 2071211 . + 0 ID=.4353;gene=yeeP;locus_tag=b1999;gene_synonym=ECK1991;gene_synonym=JW5327;note=pseudogene%2C CP4-44 prophage%3B 50S ribosome-binding GTPase family%3BPhage or Prophage Related%3B putative histone;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0006639;db_xref=UniProtKB/Swiss-Prot:P76359;db_xref=EcoGene:EG13384 EMBL gene 2071317 2071511 . + . ID=.4354;gene=isrC;locus_tag=b4435;gene_synonym=ECK1992;gene_synonym=IS102;gene_synonym=JWR0240;db_xref=EcoGene:EG31150 EMBL ncRNA 2071317 2071511 . + . ID=.4355;ncrna_class=other;gene=isrC;locus_tag=b4435;gene_synonym=ECK1992;gene_synonym=IS102;gene_synonym=JWR0240;product=novel sRNA%2C CP4-44%3B putative prophage remnant;note=identified in a large scale screen;db_xref=ASAP:ABE-0047255;db_xref=EcoGene:EG31150 EMBL gene 2071539 2074658 . + . ID=.4356;gene=flu;locus_tag=b2000;gene_synonym=agn;gene_synonym=agn43;gene_synonym=ECK1993;gene_synonym=JW1982;gene_synonym=yeeQ;gene_synonym=yzzX;db_xref=EcoGene:EG12686 EMBL CDS 2071539 2074658 . + 0 ID=.4357;gene=flu;locus_tag=b2000;gene_synonym=agn;gene_synonym=agn43;gene_synonym=ECK1993;gene_synonym=JW1982;gene_synonym=yeeQ;gene_synonym=yzzX;function=membrane%3B Outer membrane constituents%3B Phage or Prophage Related;note=antigen 43%2C phase-variable bipartite outer membrane fluffing protein;codon_start=1;transl_table=11;product=CP4-44 prophage%3B antigen 43 (Ag43) phase-variable biofilm formation autotransporter;protein_id=AAT48141.1;db_xref=GI:48994897;db_xref=ASAP:ABE-0006642;db_xref=UniProtKB/Swiss-Prot:P39180;db_xref=EcoGene:EG12686 EMBL gene 2074779 2076311 . + . ID=.4358;gene=yeeR;locus_tag=b2001;gene_synonym=ECK1994;gene_synonym=JW1983;db_xref=EcoGene:EG13385 EMBL CDS 2074779 2076311 . + 0 ID=.4359;gene=yeeR;locus_tag=b2001;gene_synonym=ECK1994;gene_synonym=JW1983;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=CP4-44 prophage%3B putative membrane protein;protein_id=AAC75062.2;db_xref=GI:87082020;db_xref=ASAP:ABE-0006648;db_xref=UniProtKB/Swiss-Prot:P76361;db_xref=EcoGene:EG13385 EMBL gene 2076308 2076754 . + . ID=.4360;gene=yeeS;locus_tag=b2002;gene_synonym=ECK1995;gene_synonym=JW1984;db_xref=EcoGene:EG13386 EMBL CDS 2076308 2076754 . + 0 ID=.4361;gene=yeeS;locus_tag=b2002;gene_synonym=ECK1995;gene_synonym=JW1984;function=Phage or Prophage Related;note=putative DNA repair protein%2C RADC family;codon_start=1;transl_table=11;product=CP4-44 prophage%3B putative DNA repair protein;protein_id=AAC75063.1;db_xref=GI:1788312;db_xref=ASAP:ABE-0006650;db_xref=UniProtKB/Swiss-Prot:P76362;db_xref=EcoGene:EG13386 EMBL gene 2076817 2077038 . + . ID=.4362;gene=yeeT;locus_tag=b2003;gene_synonym=ECK1996;gene_synonym=JW1985;db_xref=EcoGene:EG13387 EMBL CDS 2076817 2077038 . + 0 ID=.4363;gene=yeeT;locus_tag=b2003;gene_synonym=ECK1996;gene_synonym=JW1985;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=CP4-44 prophage%3B uncharacterized protein;protein_id=AAC75064.1;db_xref=GI:1788313;db_xref=ASAP:ABE-0006653;db_xref=UniProtKB/Swiss-Prot:P64521;db_xref=EcoGene:EG13387 EMBL gene 2077112 2077480 . + . ID=.4364;gene=cbeA;locus_tag=b2004;gene_synonym=ECK1997;gene_synonym=JW1986;gene_synonym=yeeU;db_xref=EcoGene:EG13388 EMBL CDS 2077112 2077480 . + 0 ID=.4365;gene=cbeA;locus_tag=b2004;gene_synonym=ECK1997;gene_synonym=JW1986;gene_synonym=yeeU;function=Phage or Prophage Related;note=putative structural protein;codon_start=1;transl_table=11;product=CP4-44 prophage%3B cytoskeleton bundling-enhancing factor A%3B CbtA antitoxin;protein_id=AAC75065.1;db_xref=GI:1788314;db_xref=ASAP:ABE-0006656;db_xref=UniProtKB/Swiss-Prot:P76364;db_xref=EcoGene:EG13388 EMBL gene 2077569 2077943 . + . ID=.4366;gene=cbtA;locus_tag=b2005;gene_synonym=ECK1998;gene_synonym=JW1987;gene_synonym=yeeV;db_xref=EcoGene:EG13389 EMBL CDS 2077569 2077943 . + 0 ID=.4367;gene=cbtA;locus_tag=b2005;gene_synonym=ECK1998;gene_synonym=JW1987;gene_synonym=yeeV;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=CP4-44 prophage%3B toxin of the YeeV-YeeU toxin-antitoxin system;protein_id=AAC75066.1;db_xref=GI:1788315;db_xref=ASAP:ABE-0006659;db_xref=UniProtKB/Swiss-Prot:P64524;db_xref=EcoGene:EG13389 EMBL gene 2077940 2078107 . + . ID=.4368;gene=yeeW;locus_tag=b2006;gene_synonym=ECK1999;gene_synonym=JW1988;pseudo=true;db_xref=EcoGene:EG13390 EMBL CDS 2077940 2078107 . + 0 ID=.4369;gene=yeeW;locus_tag=b2006;gene_synonym=ECK1999;gene_synonym=JW1988;note=CP4-44 prophage%3B uncharacterized protein%3BPhage or Prophage Related;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0006661;db_xref=UniProtKB/Swiss-Prot:P64526;db_xref=EcoGene:EG13390 EMBL gene 2078549 2078677 . - . ID=.4370;gene=yoeD;locus_tag=b4642;gene_synonym=ECK4443;pseudo=true;db_xref=EcoGene:EG14362 EMBL CDS 2078549 2078677 . - 0 ID=.4371;gene=yoeD;locus_tag=b4642;gene_synonym=ECK4443;note=pseudogene%2C CP4-44 putative prophage remnant%3BPhage or Prophage Related;pseudo=true;codon_start=1;transl_table=11;db_xref=EcoGene:EG14362 EMBL gene 2078746 2078931 . + . ID=.4372;gene=yoeF;locus_tag=b4538;gene_synonym=ECK2000;gene_synonym=JW5328;pseudo=true;db_xref=EcoGene:EG14425 EMBL CDS 2078746 2078931 . + 0 ID=.4373;gene=yoeF;locus_tag=b4538;gene_synonym=ECK2000;gene_synonym=JW5328;note=pseudogene%2C CP4-44 putative prophage remnant%3BPhage or Prophage Related;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0285059;db_xref=UniProtKB/Swiss-Prot:Q2EES3;db_xref=EcoGene:EG14425 EMBL gene 2079032 2079361 . - . ID=.4374;gene=yeeX;locus_tag=b2007;gene_synonym=ECK2001;gene_synonym=JW1989;db_xref=EcoGene:EG13391 EMBL CDS 2079032 2079361 . - 0 ID=.4375;gene=yeeX;locus_tag=b2007;gene_synonym=ECK2001;gene_synonym=JW1989;function=phenotype%3B Not classified;experiment=N-terminus verified by Edman degradation: PMID 9868784;note=putative alpha helix protein;codon_start=1;transl_table=11;product=UPF0265 family protein;protein_id=AAC75068.2;db_xref=GI:145693155;db_xref=ASAP:ABE-0006663;db_xref=UniProtKB/Swiss-Prot:P0A8M6;db_xref=EcoGene:EG13391 EMBL gene 2079533 2080591 . - . ID=.4376;gene=yeeA;locus_tag=b2008;gene_synonym=ECK2002;gene_synonym=JW1990;db_xref=EcoGene:EG11891 EMBL CDS 2079533 2080591 . - 0 ID=.4377;gene=yeeA;locus_tag=b2008;gene_synonym=ECK2002;gene_synonym=JW1990;note=GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=putative transporter%2C FUSC family inner membrane protein;protein_id=AAC75069.1;db_xref=GI:1788318;db_xref=ASAP:ABE-0006667;db_xref=UniProtKB/Swiss-Prot:P33011;db_xref=EcoGene:EG11891 EMBL gene 2080789 2081262 . - . ID=.4378;gene=sbmC;locus_tag=b2009;gene_synonym=dgi;gene_synonym=ECK2003;gene_synonym=gyrI;gene_synonym=JW1991;gene_synonym=yeeB;db_xref=EcoGene:EG11892 EMBL CDS 2080789 2081262 . - 0 ID=.4379;gene=sbmC;locus_tag=b2009;gene_synonym=dgi;gene_synonym=ECK2003;gene_synonym=gyrI;gene_synonym=JW1991;gene_synonym=yeeB;experiment=N-terminus verified by Edman degradation: PMID 9442027;note=SbmC protein%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006261 - DNA-dependent DNA replication%3B GO_process: GO:0006281 - DNA repair%3B GO_process: GO:0009432 - SOS response;codon_start=1;transl_table=11;product=DNA gyrase inhibitor;protein_id=AAC75070.1;db_xref=GI:1788319;db_xref=ASAP:ABE-0006670;db_xref=UniProtKB/Swiss-Prot:P33012;db_xref=EcoGene:EG11892 EMBL gene 2081381 2082547 . - . ID=.4380;gene=dacD;locus_tag=b2010;gene_synonym=ECK2004;gene_synonym=JW5329;gene_synonym=phsE;gene_synonym=phsF;gene_synonym=yeeC;db_xref=EcoGene:EG11893 EMBL CDS 2081381 2082547 . - 0 ID=.4381;gene=dacD;locus_tag=b2010;gene_synonym=ECK2004;gene_synonym=JW5329;gene_synonym=phsE;gene_synonym=phsF;gene_synonym=yeeC;ec_number=3.4.16.4;function=putative enzyme%3B Murein sacculus%2C peptidoglycan;note=penicillin binding protein 6b%3B GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=D-alanyl-D-alanine carboxypeptidase%3B penicillin-binding protein 6b;protein_id=AAC75071.2;db_xref=GI:87082022;db_xref=ASAP:ABE-0006680;db_xref=UniProtKB/Swiss-Prot:P33013;db_xref=EcoGene:EG11893 EMBL gene 2082756 2084183 . + . ID=.4382;gene=sbcB;locus_tag=b2011;gene_synonym=cpeA;gene_synonym=ECK2005;gene_synonym=JW1993;gene_synonym=xonA;db_xref=EcoGene:EG10926 EMBL CDS 2082756 2084183 . + 0 ID=.4383;gene=sbcB;locus_tag=b2011;gene_synonym=cpeA;gene_synonym=ECK2005;gene_synonym=JW1993;gene_synonym=xonA;ec_number=3.1.11.1;function=enzyme%3B Degradation of DNA;experiment=N-terminus verified by Edman degradation: PMID 3539937;note=exonuclease I%2C 3' --> 5' specific%3B deoxyribophosphodiesterase%3B GO_process: GO:0006308 - DNA catabolic process;codon_start=1;transl_table=11;product=exodeoxyribonuclease I%3B exonuclease I;protein_id=AAC75072.1;db_xref=GI:1788321;db_xref=ASAP:ABE-0006686;db_xref=UniProtKB/Swiss-Prot:P04995;db_xref=EcoGene:EG10926 EMBL gene 2084226 2084453 . - . ID=.4384;gene=yeeD;locus_tag=b2012;gene_synonym=ECK2006;gene_synonym=JW1994;db_xref=EcoGene:EG11894 EMBL CDS 2084226 2084453 . - 0 ID=.4385;gene=yeeD;locus_tag=b2012;gene_synonym=ECK2006;gene_synonym=JW1994;codon_start=1;transl_table=11;product=putative TusA family sulfurtransferase;protein_id=AAC75073.1;db_xref=GI:1788322;db_xref=ASAP:ABE-0006688;db_xref=UniProtKB/Swiss-Prot:P33014;db_xref=EcoGene:EG11894 EMBL gene 2084467 2085525 . - . ID=.4386;gene=yeeE;locus_tag=b2013;gene_synonym=ECK2007;gene_synonym=JW1995;db_xref=EcoGene:EG11895 EMBL CDS 2084467 2085525 . - 0 ID=.4387;gene=yeeE;locus_tag=b2013;gene_synonym=ECK2007;gene_synonym=JW1995;function=putative transport%3B Not classified;note=putative transport system permease protein;codon_start=1;transl_table=11;product=UPF0394 family inner membrane protein;protein_id=AAC75074.1;db_xref=GI:1788323;db_xref=ASAP:ABE-0006691;db_xref=UniProtKB/Swiss-Prot:P33015;db_xref=EcoGene:EG11895 EMBL gene 2085704 2087062 . - . ID=.4388;gene=plaP;locus_tag=b2014;gene_synonym=ECK2008;gene_synonym=JW5330;gene_synonym=yeeF;db_xref=EcoGene:EG11896 EMBL CDS 2085704 2087062 . - 0 ID=.4389;gene=plaP;locus_tag=b2014;gene_synonym=ECK2008;gene_synonym=JW5330;gene_synonym=yeeF;function=transport%3B Not classified;note=putative amino acid/amine transport protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putrescine importer%2C low affinity;protein_id=AAC75075.2;db_xref=GI:87082023;db_xref=ASAP:ABE-0006696;db_xref=UniProtKB/Swiss-Prot:P0AA47;db_xref=EcoGene:EG11896 EMBL gene 2087052 2087114 . - . ID=.4390;gene=yoeI;locus_tag=b4678;gene_synonym=ECK4493;db_xref=EcoGene:EG14483 EMBL CDS 2087052 2087114 . - 0 ID=.4391;gene=yoeI;locus_tag=b4678;gene_synonym=ECK4493;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=ACO59998.1;db_xref=GI:226510955;db_xref=UniProtKB/Swiss-Prot:C1P606;db_xref=EcoGene:EG14483 EMBL gene 2087329 2088258 . - . ID=.4392;gene=yeeY;locus_tag=b2015;gene_synonym=ECK2009;gene_synonym=JW5834;db_xref=EcoGene:EG13392 EMBL CDS 2087329 2088258 . - 0 ID=.4393;gene=yeeY;locus_tag=b2015;gene_synonym=ECK2009;gene_synonym=JW5834;function=putative regulator%3B Not classified;note=putative transcriptional regulator LYSR-type%3B GO_function: GO:0016563 - transcription activator activity%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=LysR family putative transcriptional regulator;protein_id=AAC75076.2;db_xref=GI:87082024;db_xref=ASAP:ABE-0006700;db_xref=UniProtKB/Swiss-Prot:P76369;db_xref=EcoGene:EG13392 EMBL gene 2088304 2089128 . - . ID=.4394;gene=yeeZ;locus_tag=b2016;gene_synonym=ECK2010;gene_synonym=JW1998;db_xref=EcoGene:EG13393 EMBL CDS 2088304 2089128 . - 0 ID=.4395;gene=yeeZ;locus_tag=b2016;gene_synonym=ECK2010;gene_synonym=JW1998;function=putative enzyme%3B Not classified;note=putative enzyme of sugar metabolism%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=putative epimerase;protein_id=AAC75077.1;db_xref=GI:1788327;db_xref=ASAP:ABE-0006702;db_xref=UniProtKB/Swiss-Prot:P0AD12;db_xref=EcoGene:EG13393 EMBL gene 2089211 2089465 . - . ID=.4396;gene=yoeB;locus_tag=b4539;gene_synonym=ECK2011;gene_synonym=JW5331;db_xref=EcoGene:EG14356 EMBL CDS 2089211 2089465 . - 0 ID=.4397;gene=yoeB;locus_tag=b4539;gene_synonym=ECK2011;gene_synonym=JW5331;note=GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=toxin of the YoeB-YefM toxin-antitoxin system;protein_id=ABD18681.1;db_xref=GI:87082025;db_xref=ASAP:ABE-0285060;db_xref=UniProtKB/Swiss-Prot:P69348;db_xref=EcoGene:EG14356 EMBL gene 2089462 2089713 . - . ID=.4398;gene=yefM;locus_tag=b2017;gene_synonym=ECK2012;gene_synonym=JW5835;db_xref=EcoGene:EG12844 EMBL CDS 2089462 2089713 . - 0 ID=.4399;gene=yefM;locus_tag=b2017;gene_synonym=ECK2012;gene_synonym=JW5835;codon_start=1;transl_table=11;product=antitoxin of the YoeB-YefM toxin-antitoxin system;protein_id=AAC75078.2;db_xref=GI:87082026;db_xref=ASAP:ABE-0006705;db_xref=UniProtKB/Swiss-Prot:P69346;db_xref=EcoGene:EG12844 EMBL gene 2089996 2090046 . + . ID=.4400;gene=hisL;locus_tag=b2018;gene_synonym=ECK2013;gene_synonym=JW2000;db_xref=EcoGene:EG11269 EMBL CDS 2089996 2090046 . + 0 ID=.4401;gene=hisL;locus_tag=b2018;gene_synonym=ECK2013;gene_synonym=JW2000;function=leader%3B Amino acid biosynthesis: Histidine;note=GO_process: GO:0000105 - histidine biosynthetic process;codon_start=1;transl_table=11;product=his operon leader peptide;protein_id=AAC75079.1;db_xref=GI:1788329;db_xref=ASAP:ABE-0006710;db_xref=UniProtKB/Swiss-Prot:P60995;db_xref=EcoGene:EG11269 EMBL gene 2090192 2091091 . + . ID=.4402;gene=hisG;locus_tag=b2019;gene_synonym=ECK2014;gene_synonym=JW2001;db_xref=EcoGene:EG10449 EMBL CDS 2090192 2091091 . + 0 ID=.4403;gene=hisG;locus_tag=b2019;gene_synonym=ECK2014;gene_synonym=JW2001;ec_number=2.4.2.17;function=enzyme%3B Amino acid biosynthesis: Histidine;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0000105 - histidine biosynthetic process;codon_start=1;transl_table=11;product=ATP phosphoribosyltransferase;protein_id=AAC75080.1;db_xref=GI:1788330;db_xref=ASAP:ABE-0006713;db_xref=UniProtKB/Swiss-Prot:P60757;db_xref=EcoGene:EG10449 EMBL gene 2091097 2092401 . + . ID=.4404;gene=hisD;locus_tag=b2020;gene_synonym=ECK2015;gene_synonym=JW2002;db_xref=EcoGene:EG10447 EMBL CDS 2091097 2092401 . + 0 ID=.4405;gene=hisD;locus_tag=b2020;gene_synonym=ECK2015;gene_synonym=JW2002;ec_number=1.1.1.23;function=enzyme%3B Amino acid biosynthesis: Histidine;note=L-histidinal:NAD+ oxidoreductase%3B L-histidinol:NAD+ oxidoreductase%3B GO_process: GO:0000105 - histidine biosynthetic process;codon_start=1;transl_table=11;product=bifunctional histidinal dehydrogenase/ histidinol dehydrogenase;protein_id=AAC75081.1;db_xref=GI:1788331;db_xref=ASAP:ABE-0006715;db_xref=UniProtKB/Swiss-Prot:P06988;db_xref=EcoGene:EG10447 EMBL gene 2092398 2093468 . + . ID=.4406;gene=hisC;locus_tag=b2021;gene_synonym=ECK2016;gene_synonym=JW2003;db_xref=EcoGene:EG10446 EMBL CDS 2092398 2093468 . + 0 ID=.4407;gene=hisC;locus_tag=b2021;gene_synonym=ECK2016;gene_synonym=JW2003;ec_number=2.6.1.9;function=enzyme%3B Amino acid biosynthesis: Histidine;note=GO_process: GO:0000105 - histidine biosynthetic process;codon_start=1;transl_table=11;product=histidinol-phosphate aminotransferase;protein_id=AAC75082.1;db_xref=GI:1788332;db_xref=ASAP:ABE-0006717;db_xref=UniProtKB/Swiss-Prot:P06986;db_xref=EcoGene:EG10446 EMBL gene 2093468 2094535 . + . ID=.4408;gene=hisB;locus_tag=b2022;gene_synonym=ECK2017;gene_synonym=JW2004;db_xref=EcoGene:EG10445 EMBL CDS 2093468 2094535 . + 0 ID=.4409;gene=hisB;locus_tag=b2022;gene_synonym=ECK2017;gene_synonym=JW2004;ec_number=3.1.3.15;ec_number=4.2.1.19;function=enzyme%3B Amino acid biosynthesis: Histidine;note=imidazoleglycerolphosphate dehydratase and histidinol-phosphate phosphatase%3B GO_process: GO:0000105 - histidine biosynthetic process;codon_start=1;transl_table=11;product=histidinol-phosphatase and imidazoleglycerol-phosphate dehydratase;protein_id=AAC75083.2;db_xref=GI:87082027;db_xref=ASAP:ABE-0006720;db_xref=UniProtKB/Swiss-Prot:P06987;db_xref=EcoGene:EG10445 EMBL gene 2094535 2095125 . + . ID=.4410;gene=hisH;locus_tag=b2023;gene_synonym=ECK2018;gene_synonym=JW2005;db_xref=EcoGene:EG10450 EMBL CDS 2094535 2095125 . + 0 ID=.4411;gene=hisH;locus_tag=b2023;gene_synonym=ECK2018;gene_synonym=JW2005;ec_number=2.4.2.-;function=enzyme%3B Amino acid biosynthesis: Histidine;experiment=N-terminus verified by Edman degradation: PMID 17366475;note=glutamine amidotransferase subunit of heterodimer with HisF %3D imidazole glycerol phosphate synthase holoenzyme%3B GO_process: GO:0000105 - histidine biosynthetic process;codon_start=1;transl_table=11;product=imidazole glycerol phosphate synthase%2C glutamine amidotransferase subunit;protein_id=AAC75084.1;db_xref=GI:1788334;db_xref=ASAP:ABE-0006722;db_xref=UniProtKB/Swiss-Prot:P60595;db_xref=EcoGene:EG10450 EMBL gene 2095125 2095862 . + . ID=.4412;gene=hisA;locus_tag=b2024;gene_synonym=ECK2019;gene_synonym=JW2006;db_xref=EcoGene:EG10444 EMBL CDS 2095125 2095862 . + 0 ID=.4413;gene=hisA;locus_tag=b2024;gene_synonym=ECK2019;gene_synonym=JW2006;ec_number=5.3.1.16;function=enzyme%3B Amino acid biosynthesis: Histidine;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0000105 - histidine biosynthetic process;codon_start=1;transl_table=11;product=N-(5'-phospho-L-ribosyl-formimino)-5-amino-1- (5'-phosphoribosyl)-4-imidazolecarboxamide isomerase;protein_id=AAC75085.2;db_xref=GI:87082028;db_xref=ASAP:ABE-0006725;db_xref=UniProtKB/Swiss-Prot:P10371;db_xref=EcoGene:EG10444 EMBL gene 2095844 2096620 . + . ID=.4414;gene=hisF;locus_tag=b2025;gene_synonym=ECK2020;gene_synonym=JW2007;db_xref=EcoGene:EG10448 EMBL CDS 2095844 2096620 . + 0 ID=.4415;gene=hisF;locus_tag=b2025;gene_synonym=ECK2020;gene_synonym=JW2007;ec_number=2.4.2.-;function=enzyme%3B Amino acid biosynthesis: Histidine;note=imidazole glycerol phosphate synthase subunit in heterodimer with HisH %3D imidazole glycerol phsphate synthase holoenzyme%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0000105 - histidine biosynthetic process;codon_start=1;transl_table=11;product=imidazole glycerol phosphate synthase%2C catalytic subunit with HisH;protein_id=AAC75086.1;db_xref=GI:1788336;db_xref=ASAP:ABE-0006727;db_xref=UniProtKB/Swiss-Prot:P60664;db_xref=EcoGene:EG10448 EMBL gene 2096614 2097225 . + . ID=.4416;gene=hisI;locus_tag=b2026;gene_synonym=ECK2021;gene_synonym=hisE;gene_synonym=hisIE;gene_synonym=JW2008;db_xref=EcoGene:EG10451 EMBL CDS 2096614 2097225 . + 0 ID=.4417;gene=hisI;locus_tag=b2026;gene_synonym=ECK2021;gene_synonym=hisE;gene_synonym=hisIE;gene_synonym=JW2008;ec_number=3.5.4.19;ec_number=3.6.1.31;function=enzyme%3B Amino acid biosynthesis: Histidine;note=phosphoribosyl-amp cyclohydrolase%3B phosphoribosyl-ATP pyrophosphatase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0000105 - histidine biosynthetic process;codon_start=1;transl_table=11;product=phosphoribosyl-AMP cyclohydrolase and phosphoribosyl-ATP pyrophosphatase;protein_id=AAC75087.1;db_xref=GI:2367128;db_xref=ASAP:ABE-0006729;db_xref=UniProtKB/Swiss-Prot:P06989;db_xref=EcoGene:EG10451 EMBL repeat_region 2097237 2097266 . + . ID=.4418;note=REP143 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 2097321 2098301 . - . ID=.4419;gene=wzzB;locus_tag=b2027;gene_synonym=cld;gene_synonym=ECK2022;gene_synonym=JW5836;gene_synonym=rol;gene_synonym=wzz;db_xref=EcoGene:EG13406 EMBL CDS 2097321 2098301 . - 0 ID=.4420;gene=wzzB;locus_tag=b2027;gene_synonym=cld;gene_synonym=ECK2022;gene_synonym=JW5836;gene_synonym=rol;gene_synonym=wzz;function=regulator%3B Outer membrane constituents;note=GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0009243 - O antigen biosynthetic process;codon_start=1;transl_table=11;product=regulator of length of O-antigen component of lipopolysaccharide chains;protein_id=AAC75088.2;db_xref=GI:87082029;db_xref=ASAP:ABE-0006731;db_xref=UniProtKB/Swiss-Prot:P76372;db_xref=EcoGene:EG13406 EMBL gene 2098447 2099613 . - . ID=.4421;gene=ugd;locus_tag=b2028;gene_synonym=ECK2023;gene_synonym=JW2010;gene_synonym=pagA;gene_synonym=pmrE;gene_synonym=udg;gene_synonym=yefA;db_xref=EcoGene:EG13407 EMBL CDS 2098447 2099613 . - 0 ID=.4422;gene=ugd;locus_tag=b2028;gene_synonym=ECK2023;gene_synonym=JW2010;gene_synonym=pagA;gene_synonym=pmrE;gene_synonym=udg;gene_synonym=yefA;ec_number=1.1.1.22;function=enzyme%3B Central intermediary metabolism: Sugar-nucleotide biosynthesis%2C conversions;note=GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0009242 - colanic acid biosynthetic process%3B GO_process: GO:0009269 - response to desiccation;codon_start=1;transl_table=11;product=UDP-glucose 6-dehydrogenase;protein_id=AAC75089.1;db_xref=GI:1788340;db_xref=ASAP:ABE-0006734;db_xref=UniProtKB/Swiss-Prot:P76373;db_xref=EcoGene:EG13407 EMBL gene 2099862 2101268 . - . ID=.4423;gene=gnd;locus_tag=b2029;gene_synonym=ECK2024;gene_synonym=JW2011;db_xref=EcoGene:EG10411 EMBL CDS 2099862 2101268 . - 0 ID=.4424;gene=gnd;locus_tag=b2029;gene_synonym=ECK2024;gene_synonym=JW2011;ec_number=1.1.1.44;function=enzyme%3B Energy metabolism%2C carbon: Oxidative branch%2C pentose pathway;note=GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0009051 - pentose-phosphate shunt%2C oxidative branch%3B GO_process: GO:0009052 - pentose-phosphate shunt%2C non-oxidative branch;codon_start=1;transl_table=11;product=6-phosphogluconate dehydrogenase%2C decarboxylating;protein_id=AAC75090.1;db_xref=GI:1788341;db_xref=ASAP:ABE-0006737;db_xref=UniProtKB/Swiss-Prot:P00350;db_xref=EcoGene:EG10411 EMBL biological_region 2101396 2103389 . - . ID=.4425;featflags=type:gene;gene=wbbL;locus_tag=b4571;gene_synonym=ECK2025;gene_synonym=JW2012;gene_synonym=JW2016;gene_synonym=yefJ;pseudo=true;db_xref=EcoGene:EG11986 EMBL gene 2101396 2101744 . - . Parent=.4425 EMBL gene 2102944 2103389 . - . Parent=.4425 EMBL biological_region 2101396 2103389 . - 0 ID=.4428;featflags=type:CDS;gene=wbbL;locus_tag=b4571;gene_synonym=ECK2025;gene_synonym=JW2012;gene_synonym=JW2016;gene_synonym=yefJ;note=pseudogene%2C lipopolysaccharide biosynthesis protein;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0006744;db_xref=ASAP:ABE-0285061;db_xref=ASAP:ABE-0285104;db_xref=UniProtKB/Swiss-Prot:P36667;db_xref=EcoGene:EG11986 EMBL CDS 2101396 2101744 . - 0 Parent=.4428 EMBL CDS 2102944 2103389 . - 0 Parent=.4428 EMBL sequence_feature 2101749 2102943 . - . ID=.4431;note=*mobile_element_type: insertion sequence:IS5I EMBL gene 2101895 2102911 . - . ID=.4432;gene=insH1;locus_tag=b2030;gene_synonym=ECK0261;db_xref=EcoGene:EG40008 EMBL CDS 2101895 2102911 . - 0 ID=.4433;gene=insH1;locus_tag=b2030;gene_synonym=ECK0261;function=IS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;codon_start=1;transl_table=11;product=IS5 transposase and trans-activator;protein_id=AAC75091.1;db_xref=GI:1788342;db_xref=ASAP:ABE-0006742;db_xref=UniProtKB/Swiss-Prot:P0CE54;db_xref=EcoGene:EG40008 EMBL gene 2103391 2104509 . - . ID=.4434;gene=wbbK;locus_tag=b2032;gene_synonym=ECK2026;gene_synonym=JW2017;gene_synonym=yefI;db_xref=EcoGene:EG11985 EMBL CDS 2103391 2104509 . - 0 ID=.4435;gene=wbbK;locus_tag=b2032;gene_synonym=ECK2026;gene_synonym=JW2017;gene_synonym=yefI;function=putative enzyme%3B Not classified;note=putative glucose transferase;codon_start=1;transl_table=11;product=lipopolysaccharide biosynthesis protein;protein_id=AAC75093.1;db_xref=GI:1788344;db_xref=ASAP:ABE-0006747;db_xref=UniProtKB/Swiss-Prot:P37751;db_xref=EcoGene:EG11985 EMBL gene 2104494 2105084 . - . ID=.4436;gene=wbbJ;locus_tag=b2033;gene_synonym=ECK2027;gene_synonym=JW2018;gene_synonym=yefH;db_xref=EcoGene:EG11984 EMBL CDS 2104494 2105084 . - 0 ID=.4437;gene=wbbJ;locus_tag=b2033;gene_synonym=ECK2027;gene_synonym=JW2018;gene_synonym=yefH;function=putative enzyme%3B Not classified;note=putative O-acetyl transferase%3B GO_process: GO:0009103 - lipopolysaccharide biosynthetic process;codon_start=1;transl_table=11;product=putative lipopolysaccharide biosynthesis O-acetyl transferase;protein_id=AAC75094.1;db_xref=GI:1788345;db_xref=ASAP:ABE-0006749;db_xref=UniProtKB/Swiss-Prot:P37750;db_xref=EcoGene:EG11984 EMBL gene 2105065 2106057 . - . ID=.4438;gene=wbbI;locus_tag=b2034;gene_synonym=ECK2028;gene_synonym=JW2019;gene_synonym=yefG;db_xref=EcoGene:EG11983 EMBL CDS 2105065 2106057 . - 0 ID=.4439;gene=wbbI;locus_tag=b2034;gene_synonym=ECK2028;gene_synonym=JW2019;gene_synonym=yefG;function=enzyme%3B Lipopolysaccharide biosynthesis;note=putative Galf transferase;codon_start=1;transl_table=11;product=d-Galf:alpha-d-Glc beta-1%2C6-galactofuranosyltransferase;protein_id=AAC75095.1;db_xref=GI:1788346;db_xref=ASAP:ABE-0006751;db_xref=UniProtKB/Swiss-Prot:P37749;db_xref=EcoGene:EG11983 EMBL gene 2106060 2107226 . - . ID=.4440;gene=wbbH;locus_tag=b2035;gene_synonym=ECK2029;gene_synonym=JW2020;gene_synonym=rfc;gene_synonym=yefF;db_xref=EcoGene:EG11982 EMBL CDS 2106060 2107226 . - 0 ID=.4441;gene=wbbH;locus_tag=b2035;gene_synonym=ECK2029;gene_synonym=JW2020;gene_synonym=rfc;gene_synonym=yefF;function=enzyme%3B Macromolecule metabolism: Lipopolysaccharide;note=GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_function: GO:0008755 - O antigen polymerase activity%3B GO_process: GO:0009243 - O antigen biosynthetic process%3B GO_process: GO:0009103 - lipopolysaccharide biosynthetic process;codon_start=1;transl_table=11;product=O-antigen polymerase;protein_id=AAC75096.1;db_xref=GI:1788347;db_xref=ASAP:ABE-0006753;db_xref=UniProtKB/Swiss-Prot:P37748;db_xref=EcoGene:EG11982 EMBL gene 2107226 2108329 . - . ID=.4442;gene=glf;locus_tag=b2036;gene_synonym=ECK2030;gene_synonym=JW2021;gene_synonym=yefE;db_xref=EcoGene:EG11981 EMBL CDS 2107226 2108329 . - 0 ID=.4443;gene=glf;locus_tag=b2036;gene_synonym=ECK2030;gene_synonym=JW2021;gene_synonym=yefE;ec_number=5.4.99.9;function=enzyme%3B Degradation of small molecules: Carbon compounds;experiment=N-terminus verified by Edman degradation: PMID 8576037;note=UDP-galactopyranose mutase%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0009243 - O antigen biosynthetic process;codon_start=1;transl_table=11;product=UDP-galactopyranose mutase%2C FAD/NAD(P)-binding;protein_id=AAC75097.1;db_xref=GI:1788348;db_xref=ASAP:ABE-0006755;db_xref=UniProtKB/Swiss-Prot:P37747;db_xref=EcoGene:EG11981 EMBL gene 2108337 2109584 . - . ID=.4444;gene=wzxB;locus_tag=b2037;gene_synonym=ECK2031;gene_synonym=JW2022;gene_synonym=rfbX;gene_synonym=wzx;db_xref=EcoGene:EG11980 EMBL CDS 2108337 2109584 . - 0 ID=.4445;gene=wzxB;locus_tag=b2037;gene_synonym=ECK2031;gene_synonym=JW2022;gene_synonym=rfbX;gene_synonym=wzx;function=putative transport%3B Surface polysaccharides %26 antigens;note=putative O-antigen transporter%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0009243 - O antigen biosynthetic process;codon_start=1;transl_table=11;product=putative polisoprenol-linked O-antigen transporter;protein_id=AAC75098.1;db_xref=GI:1788349;db_xref=ASAP:ABE-0006757;db_xref=UniProtKB/Swiss-Prot:P37746;db_xref=EcoGene:EG11980 EMBL gene 2109581 2110138 . - . ID=.4446;gene=rfbC;locus_tag=b2038;gene_synonym=ECK2032;gene_synonym=JW2023;gene_synonym=rfbD;gene_synonym=rmlC;db_xref=EcoGene:EG11979 EMBL CDS 2109581 2110138 . - 0 ID=.4447;gene=rfbC;locus_tag=b2038;gene_synonym=ECK2032;gene_synonym=JW2023;gene_synonym=rfbD;gene_synonym=rmlC;ec_number=5.1.3.13;function=enzyme%3B Central intermediary metabolism: Sugar-nucleotide biosynthesis%2C conversions;note=dTDP-6-deoxy-D-glucose-3%2C5 epimerase%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0042803 - protein homodimerization activity%3B GO_process: GO:0009226 - nucleotide-sugar biosynthetic process%3B GO_process: GO:0009243 - O antigen biosynthetic process%3B GO_process: GO:0009103 - lipopolysaccharide biosynthetic process%3B GO_process: GO:0019305 - dTDP-rhamnose biosynthetic process;codon_start=1;transl_table=11;product=dTDP-4-deoxyrhamnose-3%2C5-epimerase;protein_id=AAC75099.1;db_xref=GI:1788350;db_xref=ASAP:ABE-0006759;db_xref=UniProtKB/Swiss-Prot:P37745;db_xref=EcoGene:EG11979 EMBL gene 2110138 2111019 . - . ID=.4448;gene=rfbA;locus_tag=b2039;gene_synonym=ECK2033;gene_synonym=JW2024;gene_synonym=rmlA;gene_synonym=som;db_xref=EcoGene:EG11978 EMBL CDS 2110138 2111019 . - 0 ID=.4449;gene=rfbA;locus_tag=b2039;gene_synonym=ECK2033;gene_synonym=JW2024;gene_synonym=rmlA;gene_synonym=som;ec_number=2.7.7.24;function=enzyme%3B Central intermediary metabolism: Sugar-nucleotide biosynthesis%2C conversions;note=dTDP-glucose pyrophosphorylase%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_function: GO:0000287 - magnesium ion binding%3B GO_process: GO:0009243 - O antigen biosynthetic process%3B GO_process: GO:0019305 - dTDP-rhamnose biosynthetic process%3B GO_process: GO:0009103 - lipopolysaccharide biosynthetic process;codon_start=1;transl_table=11;product=glucose-1-phosphate thymidylyltransferase;protein_id=AAC75100.1;db_xref=GI:1788351;db_xref=ASAP:ABE-0006762;db_xref=UniProtKB/Swiss-Prot:P37744;db_xref=EcoGene:EG11978 EMBL gene 2111077 2111976 . - . ID=.4450;gene=rfbD;locus_tag=b2040;gene_synonym=ECK2034;gene_synonym=JW2025;gene_synonym=rmlD;db_xref=EcoGene:EG12411 EMBL CDS 2111077 2111976 . - 0 ID=.4451;gene=rfbD;locus_tag=b2040;gene_synonym=ECK2034;gene_synonym=JW2025;gene_synonym=rmlD;ec_number=1.1.1.133;function=enzyme%3B Central intermediary metabolism: Sugar-nucleotide biosynthesis%2C conversions;note=dTDP-6-deoxy-L-mannose-dehydrogenase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009243 - O antigen biosynthetic process%3B GO_process: GO:0009226 - nucleotide-sugar biosynthetic process;codon_start=1;transl_table=11;product=dTDP-L-rhamnose synthase%2C NAD(P)-dependent dTDP-4-dehydrorhamnose reductase subunit;protein_id=AAC75101.1;db_xref=GI:1788352;db_xref=ASAP:ABE-0006764;db_xref=UniProtKB/Swiss-Prot:P37760;db_xref=EcoGene:EG12411 EMBL gene 2111976 2113061 . - . ID=.4452;gene=rfbB;locus_tag=b2041;gene_synonym=ECK2035;gene_synonym=JW2026;gene_synonym=rmlB;gene_synonym=som;db_xref=EcoGene:EG12412 EMBL CDS 2111976 2113061 . - 0 ID=.4453;gene=rfbB;locus_tag=b2041;gene_synonym=ECK2035;gene_synonym=JW2026;gene_synonym=rmlB;gene_synonym=som;ec_number=4.2.1.46;function=enzyme%3B Central intermediary metabolism: Sugar-nucleotide biosynthesis%2C conversions;note=dTDP-glucose 4%2C6 dehydratase%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0009243 - O antigen biosynthetic process%3B GO_process: GO:0009226 - nucleotide-sugar biosynthetic process%3B GO_process: GO:0009435 - NAD biosynthetic process;codon_start=1;transl_table=11;product=dTDP-glucose 4%2C6 dehydratase%2C NAD(P)-binding;protein_id=AAC75102.1;db_xref=GI:1788353;db_xref=ASAP:ABE-0006766;db_xref=UniProtKB/Swiss-Prot:P37759;db_xref=EcoGene:EG12412 EMBL gene 2113434 2114327 . - . ID=.4454;gene=wcaN;locus_tag=b2042;gene_synonym=ECK2036;gene_synonym=galF;gene_synonym=JW2027;db_xref=EcoGene:EG13578 EMBL CDS 2113434 2114327 . - 0 ID=.4455;gene=wcaN;locus_tag=b2042;gene_synonym=ECK2036;gene_synonym=galF;gene_synonym=JW2027;function=putative enzyme%3B Central intermediary metabolism: Sugar-nucleotide biosynthesis%2C conversions;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009226 - nucleotide-sugar biosynthetic process;codon_start=1;transl_table=11;product=putative regulatory subunit for GalU;protein_id=AAC75103.1;db_xref=GI:1788355;db_xref=ASAP:ABE-0006771;db_xref=UniProtKB/Swiss-Prot:P0AAB6;db_xref=EcoGene:EG13578 EMBL gene 2114502 2115896 . - . ID=.4456;gene=wcaM;locus_tag=b2043;gene_synonym=ECK2037;gene_synonym=JW2028;gene_synonym=yefK;db_xref=EcoGene:EG12651 EMBL CDS 2114502 2115896 . - 0 ID=.4457;gene=wcaM;locus_tag=b2043;gene_synonym=ECK2037;gene_synonym=JW2028;gene_synonym=yefK;note=putative colanic acid biosynthesis protein%3B GO_process: GO:0009242 - colanic acid biosynthetic process;codon_start=1;transl_table=11;product=colanic acid biosynthesis protein;protein_id=AAC75104.1;db_xref=GI:1788356;db_xref=ASAP:ABE-0006774;db_xref=UniProtKB/Swiss-Prot:P71244;db_xref=EcoGene:EG12651 EMBL gene 2115907 2117127 . - . ID=.4458;gene=wcaL;locus_tag=b2044;gene_synonym=ECK2038;gene_synonym=JW2029;gene_synonym=yefL;db_xref=EcoGene:EG12652 EMBL CDS 2115907 2117127 . - 0 ID=.4459;gene=wcaL;locus_tag=b2044;gene_synonym=ECK2038;gene_synonym=JW2029;gene_synonym=yefL;function=putative enzyme%3B Not classified;note=putative colanic acid biosynthesis glycosyl transferase%3B GO_process: GO:0009242 - colanic acid biosynthetic process;codon_start=1;transl_table=11;product=putative glycosyl transferase;protein_id=AAC75105.1;db_xref=GI:1788357;db_xref=ASAP:ABE-0006777;db_xref=UniProtKB/Swiss-Prot:P71243;db_xref=EcoGene:EG12652 EMBL gene 2117124 2118404 . - . ID=.4460;gene=wcaK;locus_tag=b2045;gene_synonym=ECK2039;gene_synonym=JW2030;db_xref=EcoGene:EG13577 EMBL CDS 2117124 2118404 . - 0 ID=.4461;gene=wcaK;locus_tag=b2045;gene_synonym=ECK2039;gene_synonym=JW2030;function=putative enzyme%3B Not classified;note=putative galactokinase%3B GO_process: GO:0009242 - colanic acid biosynthetic process;codon_start=1;transl_table=11;product=colanic acid biosynthesis protein;protein_id=AAC75106.1;db_xref=GI:1788358;db_xref=ASAP:ABE-0006780;db_xref=UniProtKB/Swiss-Prot:P71242;db_xref=EcoGene:EG13577 EMBL repeat_region 2118466 2118651 . + . ID=.4462;note=REP144 (repetitive extragenic palindromic) element%3B contains 4 REP sequences EMBL gene 2118680 2120158 . - . ID=.4463;gene=wzxC;locus_tag=b2046;gene_synonym=ECK2040;gene_synonym=JW2031;gene_synonym=wzx;db_xref=EcoGene:EG13576 EMBL CDS 2118680 2120158 . - 0 ID=.4464;gene=wzxC;locus_tag=b2046;gene_synonym=ECK2040;gene_synonym=JW2031;gene_synonym=wzx;function=putative transport%3B Protein%2C peptide secretion;note=probable export protein;codon_start=1;transl_table=11;product=putative colanic acid exporter;protein_id=AAC75107.1;db_xref=GI:1788359;db_xref=ASAP:ABE-0006783;db_xref=UniProtKB/Swiss-Prot:P77377;db_xref=EcoGene:EG13576 EMBL gene 2120160 2121554 . - . ID=.4465;gene=wcaJ;locus_tag=b2047;gene_synonym=ECK2041;gene_synonym=JW2032;db_xref=EcoGene:EG13575 EMBL CDS 2120160 2121554 . - 0 ID=.4466;gene=wcaJ;locus_tag=b2047;gene_synonym=ECK2041;gene_synonym=JW2032;function=putative enzyme%3B Not classified;note=putative UDP-glucose lipid carrier transferase%3B GO_process: GO:0009242 - colanic acid biosynthetic process;codon_start=1;transl_table=11;product=colanic biosynthesis UDP-glucose lipid carrier transferase;protein_id=AAC75108.1;db_xref=GI:1788360;db_xref=ASAP:ABE-0006785;db_xref=UniProtKB/Swiss-Prot:P71241;db_xref=EcoGene:EG13575 EMBL gene 2121609 2122979 . - . ID=.4467;gene=cpsG;locus_tag=b2048;gene_synonym=ECK2042;gene_synonym=JW2033;gene_synonym=manB;gene_synonym=rfbK;db_xref=EcoGene:EG10162 EMBL CDS 2121609 2122979 . - 0 ID=.4468;gene=cpsG;locus_tag=b2048;gene_synonym=ECK2042;gene_synonym=JW2033;gene_synonym=manB;gene_synonym=rfbK;ec_number=5.4.2.8;function=enzyme%3B Central intermediary metabolism: Pool%2C multipurpose conversions;note=GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0009226 - nucleotide-sugar biosynthetic process%3B GO_process: GO:0009242 - colanic acid biosynthetic process%3B GO_process: GO:0009269 - response to desiccation;codon_start=1;transl_table=11;product=phosphomannomutase;protein_id=AAC75109.1;db_xref=GI:1788361;db_xref=ASAP:ABE-0006788;db_xref=UniProtKB/Swiss-Prot:P24175;db_xref=EcoGene:EG10162 EMBL gene 2123084 2124520 . - . ID=.4469;gene=cpsB;locus_tag=b2049;gene_synonym=ECK2043;gene_synonym=JW2034;gene_synonym=manC;gene_synonym=mni;gene_synonym=rfbM;db_xref=EcoGene:EG10161 EMBL CDS 2123084 2124520 . - 0 ID=.4470;gene=cpsB;locus_tag=b2049;gene_synonym=ECK2043;gene_synonym=JW2034;gene_synonym=manC;gene_synonym=mni;gene_synonym=rfbM;ec_number=2.7.7.22;function=enzyme%3B Central intermediary metabolism: Sugar-nucleotide biosynthesis%2C conversions;note=GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0009242 - colanic acid biosynthetic process%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0009226 - nucleotide-sugar biosynthetic process%3B GO_process: GO:0009269 - response to desiccation;codon_start=1;transl_table=11;product=mannose-1-phosphate guanyltransferase;protein_id=AAC75110.1;db_xref=GI:1788362;db_xref=ASAP:ABE-0006791;db_xref=UniProtKB/Swiss-Prot:P24174;db_xref=EcoGene:EG10161 EMBL gene 2124523 2125746 . - . ID=.4471;gene=wcaI;locus_tag=b2050;gene_synonym=ECK2044;gene_synonym=JW2035;gene_synonym=yefD;db_xref=EcoGene:EG11790 EMBL CDS 2124523 2125746 . - 0 ID=.4472;gene=wcaI;locus_tag=b2050;gene_synonym=ECK2044;gene_synonym=JW2035;gene_synonym=yefD;function=putative enzyme%3B Not classified;note=putative colanic biosynthesis glycosyl transferase%3B GO_process: GO:0009242 - colanic acid biosynthetic process;codon_start=1;transl_table=11;product=putative glycosyl transferase;protein_id=AAC75111.1;db_xref=GI:1788363;db_xref=ASAP:ABE-0006794;db_xref=UniProtKB/Swiss-Prot:P32057;db_xref=EcoGene:EG11790 EMBL gene 2125743 2126222 . - . ID=.4473;gene=wcaH;locus_tag=b2051;gene_synonym=ECK2045;gene_synonym=gmm;gene_synonym=JW5335;gene_synonym=nudD;gene_synonym=yefC;db_xref=EcoGene:EG11789 EMBL CDS 2125743 2126222 . - 0 ID=.4474;gene=wcaH;locus_tag=b2051;gene_synonym=ECK2045;gene_synonym=gmm;gene_synonym=JW5335;gene_synonym=nudD;gene_synonym=yefC;ec_number=1.1.1.271;function=enzyme%3B Central intermediary metabolism: Sugar-nucleotide biosynthesis%2C conversions;note=GO_process: GO:0009226 - nucleotide-sugar biosynthetic process%3B GO_process: GO:0009242 - colanic acid biosynthetic process;codon_start=1;transl_table=11;product=GDP-mannose mannosyl hydrolase;protein_id=AAC75112.2;db_xref=GI:87082031;db_xref=ASAP:ABE-0006796;db_xref=UniProtKB/Swiss-Prot:P32056;db_xref=EcoGene:EG11789 EMBL gene 2126225 2127190 . - . ID=.4475;gene=wcaG;locus_tag=b2052;gene_synonym=ECK2046;gene_synonym=fcl;gene_synonym=JW2037;gene_synonym=yefB;db_xref=EcoGene:EG11788 EMBL CDS 2126225 2127190 . - 0 ID=.4476;gene=wcaG;locus_tag=b2052;gene_synonym=ECK2046;gene_synonym=fcl;gene_synonym=JW2037;gene_synonym=yefB;ec_number=1.1.1.271;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0009242 - colanic acid biosynthetic process%3B GO_process: GO:0009269 - response to desiccation;codon_start=1;transl_table=11;product=bifunctional GDP-fucose synthetase: GDP-4-dehydro-6-deoxy-D-mannose epimerase/ GDP-4-dehydro-6-L-deoxygalactose reductase;protein_id=AAC75113.1;db_xref=GI:1788365;db_xref=ASAP:ABE-0006801;db_xref=UniProtKB/Swiss-Prot:P32055;db_xref=EcoGene:EG11788 EMBL gene 2127193 2128314 . - . ID=.4477;gene=gmd;locus_tag=b2053;gene_synonym=ECK2047;gene_synonym=JW2038;gene_synonym=yefA;gene_synonym=yefN;db_xref=EcoGene:EG11787 EMBL CDS 2127193 2128314 . - 0 ID=.4478;gene=gmd;locus_tag=b2053;gene_synonym=ECK2047;gene_synonym=JW2038;gene_synonym=yefA;gene_synonym=yefN;ec_number=4.2.1.47;function=enzyme%3B Central intermediary metabolism: Sugar-nucleotide biosynthesis%2C conversions;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0009242 - colanic acid biosynthetic process%3B GO_process: GO:0009435 - NAD biosynthetic process%3B GO_process: GO:0009269 - response to desiccation;codon_start=1;transl_table=11;product=GDP-D-mannose dehydratase%2C NAD(P)-binding;protein_id=AAC75114.1;db_xref=GI:1788366;db_xref=ASAP:ABE-0006803;db_xref=UniProtKB/Swiss-Prot:P0AC88;db_xref=EcoGene:EG11787 EMBL gene 2128340 2128888 . - . ID=.4479;gene=wcaF;locus_tag=b2054;gene_synonym=ECK2048;gene_synonym=JW2039;db_xref=EcoGene:EG13574 EMBL CDS 2128340 2128888 . - 0 ID=.4480;gene=wcaF;locus_tag=b2054;gene_synonym=ECK2048;gene_synonym=JW2039;function=putative enzyme%3B Not classified;note=putative transferase%3B GO_process: GO:0009242 - colanic acid biosynthetic process;codon_start=1;transl_table=11;product=putative acyl transferase;protein_id=AAC75115.1;db_xref=GI:1788367;db_xref=ASAP:ABE-0006805;db_xref=UniProtKB/Swiss-Prot:P0ACD2;db_xref=EcoGene:EG13574 EMBL gene 2128904 2129650 . - . ID=.4481;gene=wcaE;locus_tag=b2055;gene_synonym=ECK2049;gene_synonym=JW2040;db_xref=EcoGene:EG13573 EMBL CDS 2128904 2129650 . - 0 ID=.4482;gene=wcaE;locus_tag=b2055;gene_synonym=ECK2049;gene_synonym=JW2040;function=putative enzyme%3B Not classified;note=putative colanic acid biosynthesis glycosyl transferase%3B GO_process: GO:0009242 - colanic acid biosynthetic process;codon_start=1;transl_table=11;product=putative glycosyl transferase;protein_id=AAC75116.1;db_xref=GI:1788368;db_xref=ASAP:ABE-0006807;db_xref=UniProtKB/Swiss-Prot:P71239;db_xref=EcoGene:EG13573 EMBL gene 2129661 2130878 . - . ID=.4483;gene=wcaD;locus_tag=b2056;gene_synonym=ECK2050;gene_synonym=JW2041;db_xref=EcoGene:EG13572 EMBL CDS 2129661 2130878 . - 0 ID=.4484;gene=wcaD;locus_tag=b2056;gene_synonym=ECK2050;gene_synonym=JW2041;function=putative enzyme%3B Phage-related functions and prophages;codon_start=1;transl_table=11;product=putative colanic acid polymerase;protein_id=AAC75117.1;db_xref=GI:1788369;db_xref=ASAP:ABE-0006809;db_xref=UniProtKB/Swiss-Prot:P71238;db_xref=EcoGene:EG13572 EMBL gene 2130853 2132070 . - . ID=.4485;gene=wcaC;locus_tag=b2057;gene_synonym=ECK2051;gene_synonym=JW2042;db_xref=EcoGene:EG13571 EMBL CDS 2130853 2132070 . - 0 ID=.4486;gene=wcaC;locus_tag=b2057;gene_synonym=ECK2051;gene_synonym=JW2042;function=putative enzyme%3B Not classified;note=GO_process: GO:0009242 - colanic acid biosynthetic process;codon_start=1;transl_table=11;product=putative glycosyl transferase;protein_id=AAC75118.1;db_xref=GI:1788370;db_xref=ASAP:ABE-0006811;db_xref=UniProtKB/Swiss-Prot:P71237;db_xref=EcoGene:EG13571 EMBL gene 2132067 2132555 . - . ID=.4487;gene=wcaB;locus_tag=b2058;gene_synonym=ECK2052;gene_synonym=JW2043;db_xref=EcoGene:EG13570 EMBL CDS 2132067 2132555 . - 0 ID=.4488;gene=wcaB;locus_tag=b2058;gene_synonym=ECK2052;gene_synonym=JW2043;function=putative enzyme%3B Not classified;note=putative transferase%3B GO_process: GO:0009242 - colanic acid biosynthetic process;codon_start=1;transl_table=11;product=putative acyl transferase;protein_id=AAC75119.1;db_xref=GI:1788371;db_xref=ASAP:ABE-0006813;db_xref=UniProtKB/Swiss-Prot:P0ACC9;db_xref=EcoGene:EG13570 EMBL gene 2132558 2133397 . - . ID=.4489;gene=wcaA;locus_tag=b2059;gene_synonym=ECK2053;gene_synonym=JW2044;db_xref=EcoGene:EG13569 EMBL CDS 2132558 2133397 . - 0 ID=.4490;gene=wcaA;locus_tag=b2059;gene_synonym=ECK2053;gene_synonym=JW2044;function=putative regulator%3B Not classified;note=putative regulator%3B GO_process: GO:0009242 - colanic acid biosynthetic process;codon_start=1;transl_table=11;product=putative glycosyl transferase;protein_id=AAC75120.1;db_xref=GI:1788372;db_xref=ASAP:ABE-0006816;db_xref=UniProtKB/Swiss-Prot:P77414;db_xref=EcoGene:EG13569 EMBL repeat_region 2133432 2133465 . + . ID=.4491;note=REP145 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 2133490 2135652 . - . ID=.4492;gene=wzc;locus_tag=b2060;gene_synonym=ECK2054;gene_synonym=JW2045;db_xref=EcoGene:EG13568 EMBL CDS 2133490 2135652 . - 0 ID=.4493;gene=wzc;locus_tag=b2060;gene_synonym=ECK2054;gene_synonym=JW2045;ec_number=2.7.10.2;function=enzyme%3B Not classified;note=GO_process: GO:0009242 - colanic acid biosynthetic process%3B GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=colanic acid production tyrosine-protein kinase%3B autokinase%3B Ugd phosphorylase;protein_id=AAC75121.2;db_xref=GI:87082032;db_xref=ASAP:ABE-0006819;db_xref=UniProtKB/Swiss-Prot:P76387;db_xref=EcoGene:EG13568 EMBL gene 2135655 2136098 . - . ID=.4494;gene=wzb;locus_tag=b2061;gene_synonym=ECK2055;gene_synonym=JW2046;db_xref=EcoGene:EG13567 EMBL CDS 2135655 2136098 . - 0 ID=.4495;gene=wzb;locus_tag=b2061;gene_synonym=ECK2055;gene_synonym=JW2046;ec_number=3.1.3.48;function=enzyme%3B Not classified;note=low molecular weight protein-tyrosine-phosphatase%3B GO_process: GO:0009242 - colanic acid biosynthetic process;codon_start=1;transl_table=11;product=colanic acid production protein-tyrosine-phosphatase%3B Wzc-P dephosphorylase;protein_id=AAC75122.1;db_xref=GI:1788375;db_xref=ASAP:ABE-0006822;db_xref=UniProtKB/Swiss-Prot:P0AAB2;db_xref=EcoGene:EG13567 EMBL gene 2136104 2137243 . - . ID=.4496;gene=wza;locus_tag=b2062;gene_synonym=ECK2056;gene_synonym=JW2047;db_xref=EcoGene:EG13566 EMBL CDS 2136104 2137243 . - 0 ID=.4497;gene=wza;locus_tag=b2062;gene_synonym=ECK2056;gene_synonym=JW2047;function=transport%3B Not classified;note=putative polysaccharide export protein;codon_start=1;transl_table=11;product=colanic acid export protein%3B outer membrane auxillary lipoprotein;protein_id=AAC75123.1;db_xref=GI:1788376;db_xref=ASAP:ABE-0006825;db_xref=UniProtKB/Swiss-Prot:P0A930;db_xref=EcoGene:EG13566 EMBL gene 2137902 2139485 . + . ID=.4498;gene=yegH;locus_tag=b2063;gene_synonym=ECK2057;gene_synonym=JW5336;db_xref=EcoGene:EG14051 EMBL CDS 2137902 2139485 . + 0 ID=.4499;gene=yegH;locus_tag=b2063;gene_synonym=ECK2057;gene_synonym=JW5336;function=putative transport%3B Not classified;note=putative transport protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=inner membrane protein;protein_id=AAC75124.2;db_xref=GI:87082033;db_xref=ASAP:ABE-0006830;db_xref=UniProtKB/Swiss-Prot:P76389;db_xref=EcoGene:EG14051 EMBL repeat_region 2139702 2139738 . + . ID=.4500;note=REP146 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 2139759 2141612 . - . ID=.4501;gene=asmA;locus_tag=b2064;gene_synonym=ECK2058;gene_synonym=JW2049;gene_synonym=yegA;db_xref=EcoGene:EG11361 EMBL CDS 2139759 2141612 . - 0 ID=.4502;gene=asmA;locus_tag=b2064;gene_synonym=ECK2058;gene_synonym=JW2049;gene_synonym=yegA;function=phenotype%3B Outer membrane constituents;note=suppressor of ompF assembly mutants%3B GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0009103 - lipopolysaccharide biosynthetic process;codon_start=1;transl_table=11;product=suppressor of OmpF assembly mutants%3B putative outer membrane protein assembly factor%3B inner membrane-anchored periplasmic protein;protein_id=AAC75125.1;db_xref=GI:1788378;db_xref=ASAP:ABE-0006833;db_xref=UniProtKB/Swiss-Prot:P28249;db_xref=EcoGene:EG11361 EMBL gene 2141634 2142215 . - . ID=.4503;gene=dcd;locus_tag=b2065;gene_synonym=dus;gene_synonym=ECK2059;gene_synonym=JW2050;gene_synonym=paxA;db_xref=EcoGene:EG11418 EMBL CDS 2141634 2142215 . - 0 ID=.4504;gene=dcd;locus_tag=b2065;gene_synonym=dus;gene_synonym=ECK2059;gene_synonym=JW2050;gene_synonym=paxA;ec_number=3.5.4.13;function=enzyme%3B 2'-Deoxyribonucleotide metabolism;experiment=N-terminus verified by Edman degradation: PMID 1324907;note=GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion;codon_start=1;transl_table=11;product=deoxycytidine triphosphate deaminase%3B dCTP deaminase;protein_id=AAC75126.1;db_xref=GI:1788379;db_xref=ASAP:ABE-0006835;db_xref=UniProtKB/Swiss-Prot:P28248;db_xref=EcoGene:EG11418 EMBL gene 2142307 2142948 . - . ID=.4505;gene=udk;locus_tag=b2066;gene_synonym=ECK2060;gene_synonym=JW2051;db_xref=EcoGene:EG11701 EMBL CDS 2142307 2142948 . - 0 ID=.4506;gene=udk;locus_tag=b2066;gene_synonym=ECK2060;gene_synonym=JW2051;ec_number=2.7.1.48;function=enzyme%3B Central intermediary metabolism: Nucleotide interconversions;note=GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion;codon_start=1;transl_table=11;product=uridine/cytidine kinase;protein_id=AAC75127.2;db_xref=GI:87082034;db_xref=ASAP:ABE-0006840;db_xref=UniProtKB/Swiss-Prot:P0A8F4;db_xref=EcoGene:EG11701 EMBL gene 2143266 2146583 . + . ID=.4507;gene=yegE;locus_tag=b2067;gene_synonym=ECK2061;gene_synonym=JW2052;db_xref=EcoGene:EG12396 EMBL CDS 2143266 2146583 . + 0 ID=.4508;gene=yegE;locus_tag=b2067;gene_synonym=ECK2061;gene_synonym=JW2052;function=putative regulator%3B Not classified;note=putative sensor-type protein%3B GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=putative diguanylate cyclase;protein_id=AAC75128.1;db_xref=GI:1788381;db_xref=ASAP:ABE-0006845;db_xref=UniProtKB/Swiss-Prot:P38097;db_xref=EcoGene:EG12396 EMBL repeat_region 2146600 2146683 . + . ID=.4509;note=REP147 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 2146692 2147540 . - . ID=.4510;gene=alkA;locus_tag=b2068;gene_synonym=aidA;gene_synonym=ECK2062;gene_synonym=JW2053;db_xref=EcoGene:EG11222 EMBL CDS 2146692 2147540 . - 0 ID=.4511;gene=alkA;locus_tag=b2068;gene_synonym=aidA;gene_synonym=ECK2062;gene_synonym=JW2053;ec_number=3.2.2.21;function=enzyme%3B DNA - replication%2C repair%2C restriction/modification;experiment=N-terminus verified by Edman degradation: PMID 6094528;note=3-methyl-adenine DNA glycosylase II%2C inducible%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006281 - DNA repair;codon_start=1;transl_table=11;product=3-methyl-adenine DNA glycosylase II;protein_id=AAC75129.1;db_xref=GI:1788383;db_xref=ASAP:ABE-0006848;db_xref=UniProtKB/Swiss-Prot:P04395;db_xref=EcoGene:EG11222 EMBL gene 2147674 2149026 . + . ID=.4512;gene=yegD;locus_tag=b2069;gene_synonym=ECK2063;gene_synonym=JW2054;db_xref=EcoGene:EG12200 EMBL CDS 2147674 2149026 . + 0 ID=.4513;gene=yegD;locus_tag=b2069;gene_synonym=ECK2063;gene_synonym=JW2054;function=putative regulator%3B Not classified;note=putative heat shock protein%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=Hsp70 chaperone family protein;protein_id=AAC75130.2;db_xref=GI:87082035;db_xref=ASAP:ABE-0006856;db_xref=UniProtKB/Swiss-Prot:P36928;db_xref=EcoGene:EG12200 EMBL gene 2149039 2150985 . - . ID=.4514;gene=yegI;locus_tag=b2070;gene_synonym=ECK2064;gene_synonym=JW2055;db_xref=EcoGene:EG14052 EMBL CDS 2149039 2150985 . - 0 ID=.4515;gene=yegI;locus_tag=b2070;gene_synonym=ECK2064;gene_synonym=JW2055;function=putative enzyme%3B Not classified;note=putative chaperonin;codon_start=1;transl_table=11;product=protein kinase-related putative non-specific DNA-binding protein;protein_id=AAC75131.1;db_xref=GI:1788385;db_xref=ASAP:ABE-0006858;db_xref=UniProtKB/Swiss-Prot:P76393;db_xref=EcoGene:EG14052 EMBL gene 2151185 2151646 . + . ID=.4516;gene=yegJ;locus_tag=b2071;gene_synonym=ECK2065;gene_synonym=JW2056;db_xref=EcoGene:EG14053 EMBL CDS 2151185 2151646 . + 0 ID=.4517;gene=yegJ;locus_tag=b2071;gene_synonym=ECK2065;gene_synonym=JW2056;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC75132.1;db_xref=GI:1788386;db_xref=ASAP:ABE-0006863;db_xref=UniProtKB/Swiss-Prot:P76394;db_xref=EcoGene:EG14053 EMBL repeat_region 2151674 2151701 . + . ID=.4518;note=REP148 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 2151711 2152472 . - . ID=.4519;gene=yegK;locus_tag=b2072;gene_synonym=ECK2066;gene_synonym=JW2057;db_xref=EcoGene:EG14054 EMBL CDS 2151711 2152472 . - 0 ID=.4520;gene=yegK;locus_tag=b2072;gene_synonym=ECK2066;gene_synonym=JW2057;codon_start=1;transl_table=11;product=ser/thr phosphatase-related protein;protein_id=AAC75133.1;db_xref=GI:1788387;db_xref=ASAP:ABE-0006865;db_xref=UniProtKB/Swiss-Prot:P76395;db_xref=EcoGene:EG14054 EMBL gene 2152469 2153128 . - . ID=.4521;gene=yegL;locus_tag=b2073;gene_synonym=ECK2067;gene_synonym=JW2058;db_xref=EcoGene:EG14055 EMBL CDS 2152469 2153128 . - 0 ID=.4522;gene=yegL;locus_tag=b2073;gene_synonym=ECK2067;gene_synonym=JW2058;codon_start=1;transl_table=11;product=VMA domain protein;protein_id=AAC75134.1;db_xref=GI:1788388;db_xref=ASAP:ABE-0006867;db_xref=UniProtKB/Swiss-Prot:P76396;db_xref=EcoGene:EG14055 EMBL gene 2153309 2153451 . + . ID=.4523;gene=sibA;locus_tag=b4436;gene_synonym=ECK2068;gene_synonym=JWR0241;gene_synonym=QUAD1a;gene_synonym=ryeC;gene_synonym=tp11;db_xref=EcoGene:EG31151 EMBL ncRNA 2153309 2153451 . + . ID=.4524;ncrna_class=antisense_RNA;gene=sibA;locus_tag=b4436;gene_synonym=ECK2068;gene_synonym=JWR0241;gene_synonym=QUAD1a;gene_synonym=ryeC;gene_synonym=tp11;product=sRNA antisense regulator of toxic IbsA protein;note=identified in a large scale screen;db_xref=ASAP:ABE-0047256;db_xref=EcoGene:EG31151 EMBL gene 2153349 2153408 . - . ID=.4525;gene=ibsA;locus_tag=b4667;gene_synonym=ECK4482;db_xref=EcoGene:EG14472 EMBL CDS 2153349 2153408 . - 0 ID=.4526;gene=ibsA;locus_tag=b4667;gene_synonym=ECK4482;codon_start=1;transl_table=11;product=toxic membrane protein;protein_id=ACO59999.1;db_xref=GI:226510956;db_xref=UniProtKB/Swiss-Prot:C1P607;db_xref=EcoGene:EG14472 EMBL gene 2153644 2153779 . + . ID=.4527;gene=sibB;locus_tag=b4437;gene_synonym=ECK2069;gene_synonym=JWR0242;gene_synonym=QUAD1b;gene_synonym=ryeD;gene_synonym=tpe60;db_xref=EcoGene:EG31152 EMBL ncRNA 2153644 2153779 . + . ID=.4528;ncrna_class=antisense_RNA;gene=sibB;locus_tag=b4437;gene_synonym=ECK2069;gene_synonym=JWR0242;gene_synonym=QUAD1b;gene_synonym=ryeD;gene_synonym=tpe60;product=sRNA antisense regulator of toxic IbsB protein;note=identified in a large scale screen;db_xref=ASAP:ABE-0047257;db_xref=EcoGene:EG31152 EMBL gene 2153681 2153737 . - . ID=.4529;gene=ibsB;locus_tag=b4668;gene_synonym=ECK4483;db_xref=EcoGene:EG14473 EMBL CDS 2153681 2153737 . - 0 ID=.4530;gene=ibsB;locus_tag=b4668;gene_synonym=ECK4483;codon_start=1;transl_table=11;product=toxic membrane protein;protein_id=ACO60000.1;db_xref=GI:226510957;db_xref=UniProtKB/Swiss-Prot:C1P608;db_xref=EcoGene:EG14473 EMBL gene 2154016 2155263 . + . ID=.4531;gene=mdtA;locus_tag=b2074;gene_synonym=ECK2070;gene_synonym=JW5338;gene_synonym=yegM;db_xref=EcoGene:EG14056 EMBL CDS 2154016 2155263 . + 0 ID=.4532;gene=mdtA;locus_tag=b2074;gene_synonym=ECK2070;gene_synonym=JW5338;gene_synonym=yegM;function=putative membrane%3B Not classified;note=putative membrane protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=multidrug efflux system%2C subunit A;protein_id=AAC75135.2;db_xref=GI:87082036;db_xref=ASAP:ABE-0006872;db_xref=UniProtKB/Swiss-Prot:P76397;db_xref=EcoGene:EG14056 EMBL gene 2155263 2158385 . + . ID=.4533;gene=mdtB;locus_tag=b2075;gene_synonym=ECK2071;gene_synonym=JW2060;gene_synonym=yegN;db_xref=EcoGene:EG14057 EMBL CDS 2155263 2158385 . + 0 ID=.4534;gene=mdtB;locus_tag=b2075;gene_synonym=ECK2071;gene_synonym=JW2060;gene_synonym=yegN;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane;codon_start=1;transl_table=11;product=multidrug efflux system%2C subunit B;protein_id=AAC75136.1;db_xref=GI:1788390;db_xref=ASAP:ABE-0006874;db_xref=UniProtKB/Swiss-Prot:P76398;db_xref=EcoGene:EG14057 EMBL gene 2158386 2161463 . + . ID=.4535;gene=mdtC;locus_tag=b2076;gene_synonym=ECK2072;gene_synonym=JW2061;gene_synonym=yegO;db_xref=EcoGene:EG14058 EMBL CDS 2158386 2161463 . + 0 ID=.4536;gene=mdtC;locus_tag=b2076;gene_synonym=ECK2072;gene_synonym=JW2061;gene_synonym=yegO;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane;codon_start=1;transl_table=11;product=multidrug efflux system%2C subunit C;protein_id=AAC75137.1;db_xref=GI:1788391;db_xref=ASAP:ABE-0006877;db_xref=UniProtKB/Swiss-Prot:P76399;db_xref=EcoGene:EG14058 EMBL gene 2161464 2162879 . + . ID=.4537;gene=iceT;locus_tag=b2077;gene_synonym=ECK2073;gene_synonym=JW2062;gene_synonym=mdtD;gene_synonym=yegB;db_xref=EcoGene:EG12136 EMBL CDS 2161464 2162879 . + 0 ID=.4538;gene=iceT;locus_tag=b2077;gene_synonym=ECK2073;gene_synonym=JW2062;gene_synonym=mdtD;gene_synonym=yegB;function=putative transport%3B Not classified;note=putative transport protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative citrate/iron-citrate/zinc-citrate efflux transporter;protein_id=AAC75138.1;db_xref=GI:1788392;db_xref=ASAP:ABE-0006879;db_xref=UniProtKB/Swiss-Prot:P36554;db_xref=EcoGene:EG12136 EMBL gene 2162876 2164279 . + . ID=.4539;gene=baeS;locus_tag=b2078;gene_synonym=ECK2074;gene_synonym=JW2063;db_xref=EcoGene:EG11617 EMBL CDS 2162876 2164279 . + 0 ID=.4540;gene=baeS;locus_tag=b2078;gene_synonym=ECK2074;gene_synonym=JW2063;function=enzyme%3B RNA synthesis%2C modification%2C DNA transcription;note=sensor protein (for BaeR)%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=sensory histidine kinase in two-component regulatory system with BaeR;protein_id=AAC75139.1;db_xref=GI:1788393;db_xref=ASAP:ABE-0006882;db_xref=UniProtKB/Swiss-Prot:P30847;db_xref=EcoGene:EG11617 EMBL gene 2164276 2164998 . + . ID=.4541;gene=baeR;locus_tag=b2079;gene_synonym=ECK2075;gene_synonym=JW2064;db_xref=EcoGene:EG11618 EMBL CDS 2164276 2164998 . + 0 ID=.4542;gene=baeR;locus_tag=b2079;gene_synonym=ECK2075;gene_synonym=JW2064;function=regulator%3B RNA synthesis%2C modification%2C DNA transcription;note=transcriptional response regulatory protein (sensor BaeS)%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=response regulator in two-component regulatory system with BaeS;protein_id=AAC75140.1;db_xref=GI:1788394;db_xref=ASAP:ABE-0006884;db_xref=UniProtKB/Swiss-Prot:P69228;db_xref=EcoGene:EG11618 EMBL repeat_region 2165017 2165096 . + . ID=.4543;note=REP149 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 2165189 2165521 . + . ID=.4544;gene=yegP;locus_tag=b2080;gene_synonym=ECK2076;gene_synonym=JW5339;db_xref=EcoGene:EG14059 EMBL CDS 2165189 2165521 . + 0 ID=.4545;gene=yegP;locus_tag=b2080;gene_synonym=ECK2076;gene_synonym=JW5339;codon_start=1;transl_table=11;product=UPF0339 family protein;protein_id=AAC75141.2;db_xref=GI:87082037;db_xref=ASAP:ABE-0006888;db_xref=UniProtKB/Swiss-Prot:P76402;db_xref=EcoGene:EG14059 EMBL gene 2165668 2167029 . + . ID=.4546;gene=yegQ;locus_tag=b2081;gene_synonym=ECK2077;gene_synonym=JW2066;db_xref=EcoGene:EG14060 EMBL CDS 2165668 2167029 . + 0 ID=.4547;gene=yegQ;locus_tag=b2081;gene_synonym=ECK2077;gene_synonym=JW2066;codon_start=1;transl_table=11;product=putative peptidase;protein_id=AAC75142.1;db_xref=GI:1788397;db_xref=ASAP:ABE-0006891;db_xref=UniProtKB/Swiss-Prot:P76403;db_xref=EcoGene:EG14060 EMBL gene 2167114 2167200 . + . ID=.4548;gene=cyaR;locus_tag=b4438;gene_synonym=ECK2078;gene_synonym=JWR0243;gene_synonym=ryeE;db_xref=EcoGene:EG31153 EMBL ncRNA 2167114 2167200 . + . ID=.4549;ncrna_class=antisense_RNA;gene=cyaR;locus_tag=b4438;gene_synonym=ECK2078;gene_synonym=JWR0243;gene_synonym=ryeE;product=sRNA antisense regulator of ompX mRNA instability%2C Hfq-dependent%2C cAMP-induced;note=identified in a large scale screen;db_xref=ASAP:ABE-0047258;db_xref=EcoGene:EG31153 EMBL sequence_feature 2167198 2167826 . - . ID=.4550;note=cryptic prophage PR-X EMBL gene 2167302 2167520 . - . ID=.4551;gene=ogrK;locus_tag=b2082;gene_synonym=ECK2079;gene_synonym=JW2067;db_xref=EcoGene:EG12425 EMBL CDS 2167302 2167520 . - 0 ID=.4552;gene=ogrK;locus_tag=b2082;gene_synonym=ECK2079;gene_synonym=JW2067;function=Phage or Prophage Related;note=prophage P2 ogr protein;codon_start=1;transl_table=11;product=orphan Ogr protein%2C positive regulator of P2 growth;protein_id=AAC75143.1;db_xref=GI:1788398;db_xref=ASAP:ABE-0006893;db_xref=UniProtKB/Swiss-Prot:P37057;db_xref=EcoGene:EG12425 EMBL gene 2167602 2167814 . - . ID=.4553;gene=yegZ;locus_tag=b2083;gene_synonym=ECK2080;gene_synonym=JW5886;pseudo=true;db_xref=EcoGene:EG14309 EMBL CDS 2167602 2167814 . - 0 ID=.4554;gene=yegZ;locus_tag=b2083;gene_synonym=ECK2080;gene_synonym=JW5886;note=pseudogene%2C gpD phage P2-like protein D;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0006896;db_xref=EcoGene:EG14309 EMBL gene 2167989 2168306 . - . ID=.4555;gene=yegR;locus_tag=b2085;gene_synonym=ECK2081;gene_synonym=JW5837;db_xref=EcoGene:EG14061 EMBL CDS 2167989 2168306 . - 0 ID=.4556;gene=yegR;locus_tag=b2085;gene_synonym=ECK2081;gene_synonym=JW5837;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC75146.2;db_xref=GI:87082038;db_xref=ASAP:ABE-0006907;db_xref=UniProtKB/Swiss-Prot:P76406;db_xref=EcoGene:EG14061 EMBL gene 2168712 2169611 . + . ID=.4557;gene=yegS;locus_tag=b2086;gene_synonym=ECK2082;gene_synonym=JW2070;db_xref=EcoGene:EG14367 EMBL CDS 2168712 2169611 . + 0 ID=.4558;gene=yegS;locus_tag=b2086;gene_synonym=ECK2082;gene_synonym=JW2070;codon_start=1;transl_table=11;product=phosphatidylglycerol kinase%2C metal-dependent;protein_id=AAC75147.1;db_xref=GI:1788402;db_xref=ASAP:ABE-0006911;db_xref=UniProtKB/Swiss-Prot:P76407;db_xref=EcoGene:EG14367 EMBL repeat_region 2169650 2169683 . + . ID=.4559;note=REP150 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL biological_region 2169693 2171727 . - . ID=.4560;featflags=type:gene;gene=gatR;locus_tag=b4498;gene_synonym=ECK2083;gene_synonym=JW2074;gene_synonym=JW5340;pseudo=true;db_xref=EcoGene:EG12162 EMBL gene 2169693 2170167 . - . Parent=.4560 EMBL gene 2171429 2171727 . - . Parent=.4560 EMBL biological_region 2169693 2171727 . - 0 ID=.4563;featflags=type:CDS;gene=gatR;locus_tag=b4498;gene_synonym=ECK2083;gene_synonym=JW2074;gene_synonym=JW5340;note=pseudogene%2C repressor for gat operon%3B interrupted by IS3%3B split galactitol utilization operon repressor%2C fragment 2%3B split galactitol utilization operon repressor%2C interrupted;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0006914;db_xref=ASAP:ABE-0006921;db_xref=ASAP:ABE-0285099;db_xref=UniProtKB/Swiss-Prot:P36930;db_xref=EcoGene:EG12162 EMBL CDS 2169693 2170167 . - 0 Parent=.4563 EMBL CDS 2171429 2171727 . - 0 Parent=.4563 EMBL sequence_feature 2170171 2171428 . + . ID=.4566;note=*mobile_element_type: insertion sequence:IS3E EMBL gene 2170236 2170535 . + . ID=.4567;gene=insE1;locus_tag=b2088;gene_synonym=ECK0298;db_xref=EcoGene:EG40005 EMBL CDS 2170236 2170535 . + 0 ID=.4568;gene=insE1;locus_tag=b2088;gene_synonym=ECK0298;function=IS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;codon_start=1;transl_table=11;product=IS3 transposase A;protein_id=AAC75149.2;db_xref=GI:226510958;db_xref=ASAP:ABE-0006917;db_xref=UniProtKB/Swiss-Prot:P0CF70;db_xref=EcoGene:EG40005 EMBL gene 2170532 2171398 . + . ID=.4569;gene=insF1;locus_tag=b2089;gene_synonym=ECK0299;db_xref=EcoGene:EG40006 EMBL CDS 2170532 2171398 . + 0 ID=.4570;gene=insF1;locus_tag=b2089;gene_synonym=ECK0299;function=IS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;codon_start=1;transl_table=11;product=IS3 transposase B;protein_id=AAC75150.1;db_xref=GI:1788405;db_xref=ASAP:ABE-0006919;db_xref=UniProtKB/Swiss-Prot:P0CF83;db_xref=EcoGene:EG40006 EMBL gene 2171833 2172873 . - . ID=.4571;gene=gatD;locus_tag=b2091;gene_synonym=ECK2084;gene_synonym=JW2075;db_xref=EcoGene:EG12417 EMBL CDS 2171833 2172873 . - 0 ID=.4572;gene=gatD;locus_tag=b2091;gene_synonym=ECK2084;gene_synonym=JW2075;ec_number=1.1.1.251;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=galactitol-1-phosphate dehydrogenase%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=galactitol-1-phosphate dehydrogenase%2C Zn-dependent and NAD(P)-binding;protein_id=AAC75152.1;db_xref=GI:1788407;db_xref=ASAP:ABE-0006924;db_xref=UniProtKB/Swiss-Prot:P0A9S3;db_xref=EcoGene:EG12417 EMBL gene 2172921 2174278 . - . ID=.4573;gene=gatC;locus_tag=b2092;gene_synonym=ECK2085;gene_synonym=JW2076;pseudo=true;db_xref=EcoGene:EG12416 EMBL biological_region 2172921 2174278 . - 0 ID=.4574;featflags=type:CDS;gene=gatC;locus_tag=b2092;gene_synonym=ECK2085;gene_synonym=JW2076;note=pseudogene%2C galactitol-specific enzyme IIC component of PTS%3Btransport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols%3B PTS system galactitol-specific enzyme IIC%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0016052 - carbohydrate catabolic process;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0006928;db_xref=UniProtKB/Swiss-Prot:P69831;db_xref=EcoGene:EG12416 EMBL CDS 2172921 2173362 . - 0 Parent=.4574 EMBL CDS 2173365 2174278 . - 0 Parent=.4574 EMBL gene 2174282 2174566 . - . ID=.4577;gene=gatB;locus_tag=b2093;gene_synonym=ECK2086;gene_synonym=JW2077;db_xref=EcoGene:EG12415 EMBL CDS 2174282 2174566 . - 0 ID=.4578;gene=gatB;locus_tag=b2093;gene_synonym=ECK2086;gene_synonym=JW2077;ec_number=2.7.1.69;function=enzyme%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;experiment=N-terminus verified by Edman degradation: PMID 9868784;note=galactitol-specific enzyme IIB of phosphotransferase system%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=galactitol-specific enzyme IIB component of PTS;protein_id=AAC75154.1;db_xref=GI:1788409;db_xref=ASAP:ABE-0006930;db_xref=UniProtKB/Swiss-Prot:P37188;db_xref=EcoGene:EG12415 EMBL gene 2174597 2175049 . - . ID=.4579;gene=gatA;locus_tag=b2094;gene_synonym=ECK2087;gene_synonym=JW2078;gene_synonym=JW2081;db_xref=EcoGene:EG12414 EMBL CDS 2174597 2175049 . - 0 ID=.4580;gene=gatA;locus_tag=b2094;gene_synonym=ECK2087;gene_synonym=JW2078;gene_synonym=JW2081;ec_number=2.7.1.69;function=enzyme%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=galactitol-specific enzyme IIA of phosphotransferase system%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=galactitol-specific enzyme IIA component of PTS;protein_id=AAC75155.1;db_xref=GI:1788410;db_xref=ASAP:ABE-0006932;db_xref=UniProtKB/Swiss-Prot:P69828;db_xref=EcoGene:EG12414 EMBL gene 2175059 2176321 . - . ID=.4581;gene=gatZ;locus_tag=b2095;gene_synonym=ECK2088;gene_synonym=JW2082;db_xref=EcoGene:EG12418 EMBL CDS 2175059 2176321 . - 0 ID=.4582;gene=gatZ;locus_tag=b2095;gene_synonym=ECK2088;gene_synonym=JW2082;ec_number=4.1.2.40;function=putative enzyme%3B Not classified;experiment=N-terminus verified by Edman degradation: PMID 17895580;note=putative tagatose 6-phosphate kinase 1%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=D-tagatose 1%2C6-bisphosphate aldolase 2%2C subunit;protein_id=AAC75156.1;db_xref=GI:1788411;db_xref=ASAP:ABE-0006934;db_xref=UniProtKB/Swiss-Prot:P0C8J8;db_xref=EcoGene:EG12418 EMBL gene 2176350 2177204 . - . ID=.4583;gene=gatY;locus_tag=b2096;gene_synonym=ECK2089;gene_synonym=JW5343;gene_synonym=yegF;db_xref=EcoGene:EG12419 EMBL CDS 2176350 2177204 . - 0 ID=.4584;gene=gatY;locus_tag=b2096;gene_synonym=ECK2089;gene_synonym=JW5343;gene_synonym=yegF;ec_number=4.1.2.40;function=enzyme%3B Degradation of small molecules: Carbon compounds;experiment=N-terminus verified by Edman degradation: PMID 10094700%2C17895580;note=tagatose-bisphosphate aldolase 1%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=D-tagatose 1%2C6-bisphosphate aldolase 2%2C catalytic subunit;protein_id=AAC75157.2;db_xref=GI:87082041;db_xref=ASAP:ABE-0006938;db_xref=UniProtKB/Swiss-Prot:P0C8J6;db_xref=EcoGene:EG12419 EMBL repeat_region 2177408 2177484 . + . ID=.4585;note=REP151 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 2177512 2178564 . - . ID=.4586;gene=fbaB;locus_tag=b2097;gene_synonym=dhnA;gene_synonym=ECK2090;gene_synonym=JW5344;db_xref=EcoGene:EG14062 EMBL CDS 2177512 2178564 . - 0 ID=.4587;gene=fbaB;locus_tag=b2097;gene_synonym=dhnA;gene_synonym=ECK2090;gene_synonym=JW5344;ec_number=4.1.2.13;note=GO_process: GO:0006096 - glycolysis;codon_start=1;transl_table=11;product=fructose-bisphosphate aldolase class I;protein_id=AAC75158.2;db_xref=GI:87082042;db_xref=ASAP:ABE-0006941;db_xref=UniProtKB/Swiss-Prot:P0A991;db_xref=EcoGene:EG14062 EMBL gene 2178821 2180098 . + . ID=.4588;gene=yegT;locus_tag=b2098;gene_synonym=ECK2091;gene_synonym=JW2085;db_xref=EcoGene:EG14063 EMBL CDS 2178821 2180098 . + 0 ID=.4589;gene=yegT;locus_tag=b2098;gene_synonym=ECK2091;gene_synonym=JW2085;function=transport%3B Transport of small molecules: Nucleosides%2C purines%2C pyrimidines;note=putative nucleoside permease protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=nucleoside transporter%2C low affinity;protein_id=AAC75159.1;db_xref=GI:1788415;db_xref=ASAP:ABE-0006946;db_xref=UniProtKB/Swiss-Prot:P76417;db_xref=EcoGene:EG14063 EMBL gene 2180095 2181099 . + . ID=.4590;gene=yegU;locus_tag=b2099;gene_synonym=ECK2092;gene_synonym=JW2086;db_xref=EcoGene:EG14064 EMBL CDS 2180095 2181099 . + 0 ID=.4591;gene=yegU;locus_tag=b2099;gene_synonym=ECK2092;gene_synonym=JW2086;codon_start=1;transl_table=11;product=ADP-ribosylglycohydrolase family protein;protein_id=AAC75160.1;db_xref=GI:1788416;db_xref=ASAP:ABE-0006948;db_xref=UniProtKB/Swiss-Prot:P76418;db_xref=EcoGene:EG14064 EMBL gene 2181096 2182061 . + . ID=.4592;gene=yegV;locus_tag=b2100;gene_synonym=ECK2093;gene_synonym=JW2087;db_xref=EcoGene:EG14065 EMBL CDS 2181096 2182061 . + 0 ID=.4593;gene=yegV;locus_tag=b2100;gene_synonym=ECK2093;gene_synonym=JW2087;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=putative kinase;protein_id=AAC75161.1;db_xref=GI:1788417;db_xref=ASAP:ABE-0006950;db_xref=UniProtKB/Swiss-Prot:P76419;db_xref=EcoGene:EG14065 EMBL gene 2182035 2182781 . - . ID=.4594;gene=yegW;locus_tag=b2101;gene_synonym=ECK2094;gene_synonym=JW2088;db_xref=EcoGene:EG14066 EMBL CDS 2182035 2182781 . - 0 ID=.4595;gene=yegW;locus_tag=b2101;gene_synonym=ECK2094;gene_synonym=JW2088;function=putative regulator%3B Not classified;note=putative transcriptional regulator%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=putative DNA-binding transcriptional regulator;protein_id=AAC75162.1;db_xref=GI:1788418;db_xref=ASAP:ABE-0006952;db_xref=UniProtKB/Swiss-Prot:P0ACM5;db_xref=EcoGene:EG14066 EMBL gene 2182833 2183651 . - . ID=.4596;gene=yegX;locus_tag=b2102;gene_synonym=ECK2095;gene_synonym=JW5345;db_xref=EcoGene:EG14067 EMBL CDS 2182833 2183651 . - 0 ID=.4597;gene=yegX;locus_tag=b2102;gene_synonym=ECK2095;gene_synonym=JW5345;codon_start=1;transl_table=11;product=putative family 25 glycosyl hydrolase;protein_id=AAC75163.2;db_xref=GI:87082043;db_xref=ASAP:ABE-0006955;db_xref=UniProtKB/Swiss-Prot:P76421;db_xref=EcoGene:EG14067 EMBL gene 2183716 2184516 . - . ID=.4598;gene=thiD;locus_tag=b2103;gene_synonym=ECK2096;gene_synonym=JW2090;gene_synonym=thiA;gene_synonym=thiJ;gene_synonym=thiN;db_xref=EcoGene:EG14068 EMBL CDS 2183716 2184516 . - 0 ID=.4599;gene=thiD;locus_tag=b2103;gene_synonym=ECK2096;gene_synonym=JW2090;gene_synonym=thiA;gene_synonym=thiJ;gene_synonym=thiN;ec_number=2.7.1.49;ec_number=2.7.4.7;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Thiamine;note=phosphomethylpyrimidine kinase%3B GO_process: GO:0009228 - thiamin biosynthetic process;codon_start=1;transl_table=11;product=hydroxy-methylpyrimidine kinase and hydroxy-phosphomethylpyrimidine kinase;protein_id=AAC75164.1;db_xref=GI:1788420;db_xref=ASAP:ABE-0006958;db_xref=UniProtKB/Swiss-Prot:P76422;db_xref=EcoGene:EG14068 EMBL gene 2184513 2185301 . - . ID=.4600;gene=thiM;locus_tag=b2104;gene_synonym=ECK2097;gene_synonym=JW2091;db_xref=EcoGene:EG14069 EMBL CDS 2184513 2185301 . - 0 ID=.4601;gene=thiM;locus_tag=b2104;gene_synonym=ECK2097;gene_synonym=JW2091;ec_number=2.7.1.50;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Thiamine;note=GO_process: GO:0009228 - thiamin biosynthetic process;codon_start=1;transl_table=11;product=hydoxyethylthiazole kinase;protein_id=AAC75165.1;db_xref=GI:1788421;db_xref=ASAP:ABE-0006960;db_xref=UniProtKB/Swiss-Prot:P76423;db_xref=EcoGene:EG14069 EMBL gene 2185524 2185796 . - . ID=.4602;gene=rcnR;locus_tag=b2105;gene_synonym=ECK2098;gene_synonym=JW2092;gene_synonym=yohL;db_xref=EcoGene:EG14070 EMBL CDS 2185524 2185796 . - 0 ID=.4603;gene=rcnR;locus_tag=b2105;gene_synonym=ECK2098;gene_synonym=JW2092;gene_synonym=yohL;codon_start=1;transl_table=11;product=transcriptional repressor of rcnA;protein_id=AAC75166.1;db_xref=GI:1788422;db_xref=ASAP:ABE-0006964;db_xref=UniProtKB/Swiss-Prot:P64530;db_xref=EcoGene:EG14070 EMBL gene 2185917 2186741 . + . ID=.4604;gene=rcnA;locus_tag=b2106;gene_synonym=ECK2099;gene_synonym=JW2093;gene_synonym=yohM;db_xref=EcoGene:EG14071 EMBL CDS 2185917 2186741 . + 0 ID=.4605;gene=rcnA;locus_tag=b2106;gene_synonym=ECK2099;gene_synonym=JW2093;gene_synonym=yohM;note=GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=membrane protein conferring nickel and cobalt resistance;protein_id=AAC75167.1;db_xref=GI:1788423;db_xref=ASAP:ABE-0006968;db_xref=UniProtKB/Swiss-Prot:P76425;db_xref=EcoGene:EG14071 EMBL gene 2186960 2187298 . + . ID=.4606;gene=rcnB;locus_tag=b2107;gene_synonym=ECK2100;gene_synonym=JW5346;gene_synonym=yohN;db_xref=EcoGene:EG14072 EMBL CDS 2186960 2187298 . + 0 ID=.4607;gene=rcnB;locus_tag=b2107;gene_synonym=ECK2100;gene_synonym=JW5346;gene_synonym=yohN;codon_start=1;transl_table=11;product=periplasmic modulator of Ni and Co efflux;protein_id=AAC75168.2;db_xref=GI:87082044;db_xref=ASAP:ABE-0006970;db_xref=UniProtKB/Swiss-Prot:P64534;db_xref=EcoGene:EG14072 EMBL gene 2187380 2188414 . - . ID=.4608;gene=yehA;locus_tag=b2108;gene_synonym=ECK2101;gene_synonym=JW2095;db_xref=EcoGene:EG11987 EMBL CDS 2187380 2188414 . - 0 ID=.4609;gene=yehA;locus_tag=b2108;gene_synonym=ECK2101;gene_synonym=JW2095;function=putative structural component%3B Surface structures;note=putative type-1 fimbrial protein;codon_start=1;transl_table=11;product=putative fimbrial-like adhesin protein;protein_id=AAC75169.1;db_xref=GI:1788426;db_xref=ASAP:ABE-0006972;db_xref=UniProtKB/Swiss-Prot:P33340;db_xref=EcoGene:EG11987 EMBL gene 2188430 2190910 . - . ID=.4610;gene=yehB;locus_tag=b2109;gene_synonym=ECK2102;gene_synonym=JW2096;db_xref=EcoGene:EG11988 EMBL CDS 2188430 2190910 . - 0 ID=.4611;gene=yehB;locus_tag=b2109;gene_synonym=ECK2102;gene_synonym=JW2096;function=putative membrane%3B Not classified;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane;codon_start=1;transl_table=11;product=putative outer membrane protein;protein_id=AAC75170.1;db_xref=GI:1788427;db_xref=ASAP:ABE-0006974;db_xref=UniProtKB/Swiss-Prot:P33341;db_xref=EcoGene:EG11988 EMBL gene 2190926 2191645 . - . ID=.4612;gene=yehC;locus_tag=b2110;gene_synonym=ECK2103;gene_synonym=JW2097;db_xref=EcoGene:EG11989 EMBL CDS 2190926 2191645 . - 0 ID=.4613;gene=yehC;locus_tag=b2110;gene_synonym=ECK2103;gene_synonym=JW2097;function=putative factor%3B Surface structures;note=putative chaperone%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=putative periplasmic pilin chaperone;protein_id=AAC75171.1;db_xref=GI:1788428;db_xref=ASAP:ABE-0006978;db_xref=UniProtKB/Swiss-Prot:P33342;db_xref=EcoGene:EG11989 EMBL gene 2191680 2192222 . - . ID=.4614;gene=yehD;locus_tag=b2111;gene_synonym=ECK2104;gene_synonym=JW2098;db_xref=EcoGene:EG11990 EMBL CDS 2191680 2192222 . - 0 ID=.4615;gene=yehD;locus_tag=b2111;gene_synonym=ECK2104;gene_synonym=JW2098;function=putative structural component%3B Surface structures;note=putative fimbrial-like protein%3B GO_component: GO:0009289 - pilus;codon_start=1;transl_table=11;product=putative fimbrial-like adhesin protein;protein_id=AAC75172.1;db_xref=GI:1788429;db_xref=ASAP:ABE-0006980;db_xref=UniProtKB/Swiss-Prot:P33343;db_xref=EcoGene:EG11990 EMBL gene 2192515 2192796 . - . ID=.4616;gene=yehE;locus_tag=b2112;gene_synonym=ECK2105;gene_synonym=JW2099;db_xref=EcoGene:EG11991 EMBL CDS 2192515 2192796 . - 0 ID=.4617;gene=yehE;locus_tag=b2112;gene_synonym=ECK2105;gene_synonym=JW2099;codon_start=1;transl_table=11;product=DUF2574 family protein;protein_id=AAC75173.1;db_xref=GI:1788430;db_xref=ASAP:ABE-0006984;db_xref=UniProtKB/Swiss-Prot:P33344;db_xref=EcoGene:EG11991 EMBL gene 2193059 2194168 . - . ID=.4618;gene=mrp;locus_tag=b2113;gene_synonym=apbC;gene_synonym=ECK2106;gene_synonym=JW2100;db_xref=EcoGene:EG10611 EMBL CDS 2193059 2194168 . - 0 ID=.4619;gene=mrp;locus_tag=b2113;gene_synonym=apbC;gene_synonym=ECK2106;gene_synonym=JW2100;function=putative enzyme%3B Not classified;note=putative ATPase;codon_start=1;transl_table=11;product=antiporter inner membrane protein;protein_id=AAC75174.2;db_xref=GI:87082045;db_xref=ASAP:ABE-0006987;db_xref=UniProtKB/Swiss-Prot:P0AF08;db_xref=EcoGene:EG10611 EMBL gene 2194300 2196333 . + . ID=.4620;gene=metG;locus_tag=b2114;gene_synonym=ECK2107;gene_synonym=JW2101;db_xref=EcoGene:EG10586 EMBL CDS 2194300 2196333 . + 0 ID=.4621;gene=metG;locus_tag=b2114;gene_synonym=ECK2107;gene_synonym=JW2101;ec_number=6.1.1.10;function=enzyme%3B Aminoacyl tRNA synthetases%2C tRNA modification;note=methionine tRNA synthetase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006418 - tRNA aminoacylation for protein translation;codon_start=1;transl_table=11;product=methionyl-tRNA synthetase;protein_id=AAC75175.1;db_xref=GI:1788432;db_xref=ASAP:ABE-0006991;db_xref=UniProtKB/Swiss-Prot:P00959;db_xref=EcoGene:EG10586 EMBL gene 2196474 2200269 . + . ID=.4622;gene=yehH;locus_tag=b4499;gene_synonym=dinO;gene_synonym=ECK2108;gene_synonym=JW2102;gene_synonym=JW5915;gene_synonym=JW5916;gene_synonym=molR;gene_synonym=sosF;gene_synonym=yehF;gene_synonym=yehG;pseudo=true;db_xref=EcoGene:EG11992 EMBL biological_region 2196474 2200269 . + 0 ID=.4623;featflags=type:CDS;gene=yehH;locus_tag=b4499;gene_synonym=dinO;gene_synonym=ECK2108;gene_synonym=JW2102;gene_synonym=JW5915;gene_synonym=JW5916;gene_synonym=molR;gene_synonym=sosF;gene_synonym=yehF;gene_synonym=yehG;note=DUF4132 family pseudogene%3B defective yehI paralog%3B molybdate metabolism regulator%2C first fragment%3B molybdate metabolism regulator%2C second fragment 2%3B yehI' molR mutations have phenotypes and the N-terminal molR fragment of yehI' may be expressed and may have retained or evolved MolR function;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0006997;db_xref=ASAP:ABE-0006999;db_xref=ASAP:ABE-0007001;db_xref=ASAP:ABE-0285100;db_xref=UniProtKB/Swiss-Prot:P33345;db_xref=EcoGene:EG11992 EMBL CDS 2196474 2199320 . + 0 Parent=.4623 EMBL CDS 2199322 2200269 . + 0 Parent=.4623 EMBL gene 2200279 2203911 . + . ID=.4626;gene=yehI;locus_tag=b2118;gene_synonym=ECK2109;gene_synonym=JW2105;db_xref=EcoGene:EG11995 EMBL CDS 2200279 2203911 . + 0 ID=.4627;gene=yehI;locus_tag=b2118;gene_synonym=ECK2109;gene_synonym=JW2105;function=putative regulator%3B Not classified;note=putative regulator;codon_start=1;transl_table=11;product=DUF4132 domain-containing protein;protein_id=AAC75179.1;db_xref=GI:1788436;db_xref=ASAP:ABE-0007003;db_xref=UniProtKB/Swiss-Prot:P33346;db_xref=EcoGene:EG11995 EMBL gene 2203972 2204289 . + . ID=.4628;gene=yehK;locus_tag=b4541;gene_synonym=ECK2110;gene_synonym=JW2106;db_xref=EcoGene:EG11997 EMBL CDS 2203972 2204289 . + 0 ID=.4629;gene=yehK;locus_tag=b4541;gene_synonym=ECK2110;gene_synonym=JW2106;note=GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=ABD18687.1;db_xref=GI:87082048;db_xref=ASAP:ABE-0285062;db_xref=UniProtKB/Swiss-Prot:P33347;db_xref=EcoGene:EG11997 EMBL gene 2204596 2205684 . + . ID=.4630;gene=yehL;locus_tag=b2119;gene_synonym=ECK2111;gene_synonym=JW5349;db_xref=EcoGene:EG11998 EMBL CDS 2204596 2205684 . + 0 ID=.4631;gene=yehL;locus_tag=b2119;gene_synonym=ECK2111;gene_synonym=JW5349;note=GO_function: GO:0004009 - ATP-binding cassette (ABC) transporter activity;codon_start=1;transl_table=11;product=putative hexameric AAA+ MoxR family ATPase;protein_id=AAC75180.2;db_xref=GI:87082049;db_xref=ASAP:ABE-0007006;db_xref=UniProtKB/Swiss-Prot:P33348;db_xref=EcoGene:EG11998 EMBL gene 2205695 2207974 . + . ID=.4632;gene=yehM;locus_tag=b2120;gene_synonym=ECK2112;gene_synonym=JW2108;gene_synonym=yehN;gene_synonym=yehO;db_xref=EcoGene:EG11999 EMBL CDS 2205695 2207974 . + 0 ID=.4633;gene=yehM;locus_tag=b2120;gene_synonym=ECK2112;gene_synonym=JW2108;gene_synonym=yehN;gene_synonym=yehO;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC75181.1;db_xref=GI:1788439;db_xref=ASAP:ABE-0007008;db_xref=UniProtKB/Swiss-Prot:P33349;db_xref=EcoGene:EG11999 EMBL gene 2207967 2209103 . + . ID=.4634;gene=yehP;locus_tag=b2121;gene_synonym=ECK2113;gene_synonym=JW5350;db_xref=EcoGene:EG12002 EMBL CDS 2207967 2209103 . + 0 ID=.4635;gene=yehP;locus_tag=b2121;gene_synonym=ECK2113;gene_synonym=JW5350;codon_start=1;transl_table=11;product=VMA domain putative YehL ATPase stimulator;protein_id=AAC75182.1;db_xref=GI:1788440;db_xref=ASAP:ABE-0007013;db_xref=UniProtKB/Swiss-Prot:P33352;db_xref=EcoGene:EG12002 EMBL gene 2209100 2211100 . + . ID=.4636;gene=yehQ;locus_tag=b2122;gene_synonym=ECK2114;gene_synonym=JW2110;pseudo=true;db_xref=EcoGene:EG12003 EMBL CDS 2209100 2211100 . + 0 ID=.4637;gene=yehQ;locus_tag=b2122;gene_synonym=ECK2114;gene_synonym=JW2110;note=pseudogene;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0007015;db_xref=UniProtKB/Swiss-Prot:P33353;db_xref=EcoGene:EG12003 EMBL gene 2211225 2211686 . + . ID=.4638;gene=yehR;locus_tag=b2123;gene_synonym=ECK2115;gene_synonym=JW5351;db_xref=EcoGene:EG12004 EMBL CDS 2211225 2211686 . + 0 ID=.4639;gene=yehR;locus_tag=b2123;gene_synonym=ECK2115;gene_synonym=JW5351;function=enzyme%3B Transport of small molecules: Cations;codon_start=1;transl_table=11;product=lipoprotein%2C DUF1307 family;protein_id=AAC75184.2;db_xref=GI:87082051;db_xref=ASAP:ABE-0007018;db_xref=UniProtKB/Swiss-Prot:P33354;db_xref=EcoGene:EG12004 EMBL gene 2211726 2212196 . - . ID=.4640;gene=yehS;locus_tag=b2124;gene_synonym=ECK2116;gene_synonym=JW2112;db_xref=EcoGene:EG12005 EMBL CDS 2211726 2212196 . - 0 ID=.4641;gene=yehS;locus_tag=b2124;gene_synonym=ECK2116;gene_synonym=JW2112;codon_start=1;transl_table=11;product=DUF1456 family protein;protein_id=AAC75185.1;db_xref=GI:1788443;db_xref=ASAP:ABE-0007021;db_xref=UniProtKB/Swiss-Prot:P33355;db_xref=EcoGene:EG12005 EMBL gene 2212243 2212962 . - . ID=.4642;gene=yehT;locus_tag=b2125;gene_synonym=ECK2117;gene_synonym=JW5352;db_xref=EcoGene:EG12006 EMBL CDS 2212243 2212962 . - 0 ID=.4643;gene=yehT;locus_tag=b2125;gene_synonym=ECK2117;gene_synonym=JW5352;codon_start=1;transl_table=11;product=putative response regulator in two-component system withYehU;protein_id=AAC75186.2;db_xref=GI:87082052;db_xref=ASAP:ABE-0007023;db_xref=UniProtKB/Swiss-Prot:P0AFT5;db_xref=EcoGene:EG12006 EMBL gene 2212959 2214644 . - . ID=.4644;gene=yehU;locus_tag=b2126;gene_synonym=ECK2118;gene_synonym=JW5353;db_xref=EcoGene:EG12007 EMBL CDS 2212959 2214644 . - 0 ID=.4645;gene=yehU;locus_tag=b2126;gene_synonym=ECK2118;gene_synonym=JW5353;function=putative regulator%3B Not classified;note=putative 2-component sensor protein%3B GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=inner membrane putative sensory kinase in two-component system with YehT;protein_id=AAC75187.1;db_xref=GI:1788446;db_xref=ASAP:ABE-0007027;db_xref=UniProtKB/Swiss-Prot:P0AD14;db_xref=EcoGene:EG12007 EMBL gene 2214866 2215597 . + . ID=.4646;gene=mlrA;locus_tag=b2127;gene_synonym=ECK2119;gene_synonym=JW2115;gene_synonym=yehV;db_xref=EcoGene:EG12008 EMBL CDS 2214866 2215597 . + 0 ID=.4647;gene=mlrA;locus_tag=b2127;gene_synonym=ECK2119;gene_synonym=JW2115;gene_synonym=yehV;function=regulator%3B Not classified;note=putative transcriptional regulator%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=transcriptional activator of csgD and csgBA;protein_id=AAC75188.1;db_xref=GI:1788448;db_xref=ASAP:ABE-0007030;db_xref=UniProtKB/Swiss-Prot:P33358;db_xref=EcoGene:EG12008 EMBL gene 2215657 2215764 . + . ID=.4648;gene=yohO;locus_tag=b4542;gene_synonym=ECK2120;gene_synonym=JW5354;db_xref=EcoGene:EG14426 EMBL CDS 2215657 2215764 . + 0 ID=.4649;gene=yohO;locus_tag=b4542;gene_synonym=ECK2120;gene_synonym=JW5354;codon_start=1;transl_table=11;product=putative membrane protein;protein_id=ABD18688.1;db_xref=GI:87082053;db_xref=ASAP:ABE-0285063;db_xref=UniProtKB/Swiss-Prot:Q2EES6;db_xref=EcoGene:EG14426 EMBL gene 2215745 2216476 . - . ID=.4650;gene=yehW;locus_tag=b2128;gene_synonym=ECK2121;gene_synonym=JW2116;db_xref=EcoGene:EG12009 EMBL CDS 2215745 2216476 . - 0 ID=.4651;gene=yehW;locus_tag=b2128;gene_synonym=ECK2121;gene_synonym=JW2116;function=putative transport%3B Not classified;note=putative transport system permease protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative ABC transporter permease;protein_id=AAC75189.1;db_xref=GI:1788449;db_xref=ASAP:ABE-0007032;db_xref=UniProtKB/Swiss-Prot:P33359;db_xref=EcoGene:EG12009 EMBL gene 2216481 2217407 . - . ID=.4652;gene=yehX;locus_tag=b2129;gene_synonym=ECK2122;gene_synonym=JW2117;db_xref=EcoGene:EG12010 EMBL CDS 2216481 2217407 . - 0 ID=.4653;gene=yehX;locus_tag=b2129;gene_synonym=ECK2122;gene_synonym=JW2117;function=putative transport%3B Not classified;note=putative ATP-binding component of a transport system%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=putative ABC transporter ATPase;protein_id=AAC75190.1;db_xref=GI:1788450;db_xref=ASAP:ABE-0007034;db_xref=UniProtKB/Swiss-Prot:P33360;db_xref=EcoGene:EG12010 EMBL gene 2217400 2218557 . - . ID=.4654;gene=yehY;locus_tag=b2130;gene_synonym=ECK2123;gene_synonym=JW2118;db_xref=EcoGene:EG12011 EMBL CDS 2217400 2218557 . - 0 ID=.4655;gene=yehY;locus_tag=b2130;gene_synonym=ECK2123;gene_synonym=JW2118;function=putative transport%3B Not classified;note=putative transport system permease protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative ABC transporter permease;protein_id=AAC75191.1;db_xref=GI:1788451;db_xref=ASAP:ABE-0007038;db_xref=UniProtKB/Swiss-Prot:P33361;db_xref=EcoGene:EG12011 EMBL gene 2218564 2219481 . - . ID=.4656;gene=osmF;locus_tag=b2131;gene_synonym=ECK2124;gene_synonym=JW2119;gene_synonym=yehZ;db_xref=EcoGene:EG12012 EMBL CDS 2218564 2219481 . - 0 ID=.4657;gene=osmF;locus_tag=b2131;gene_synonym=ECK2124;gene_synonym=JW2119;gene_synonym=yehZ;function=putative transport%3B Not classified;note=putative transport system permease protein%3B GO_component: GO:0042597 - periplasmic space;codon_start=1;transl_table=11;product=putative ABC transporter periplasmic binding protein;protein_id=AAC75192.1;db_xref=GI:1788452;db_xref=ASAP:ABE-0007040;db_xref=UniProtKB/Swiss-Prot:P33362;db_xref=EcoGene:EG12012 EMBL repeat_region 2219625 2219658 . + . ID=.4658;note=REP152 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 2219692 2221989 . - . ID=.4659;gene=bglX;locus_tag=b2132;gene_synonym=ECK2125;gene_synonym=glh;gene_synonym=JW2120;gene_synonym=yohA;db_xref=EcoGene:EG12013 EMBL CDS 2219692 2221989 . - 0 ID=.4660;gene=bglX;locus_tag=b2132;gene_synonym=ECK2125;gene_synonym=glh;gene_synonym=JW2120;gene_synonym=yohA;ec_number=3.2.1.21;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=beta-D-glucoside glucohydrolase%2C periplasmic;protein_id=AAC75193.1;db_xref=GI:1788453;db_xref=ASAP:ABE-0007043;db_xref=UniProtKB/Swiss-Prot:P33363;db_xref=EcoGene:EG12013 EMBL gene 2222185 2223900 . + . ID=.4661;gene=dld;locus_tag=b2133;gene_synonym=ECK2126;gene_synonym=JW2121;db_xref=EcoGene:EG10231 EMBL CDS 2222185 2223900 . + 0 ID=.4662;gene=dld;locus_tag=b2133;gene_synonym=ECK2126;gene_synonym=JW2121;ec_number=1.1.1.28;function=enzyme%3B Energy metabolism%2C carbon: Aerobic respiration;note=D-lactate dehydrogenase%2C FAD protein%2C NADH independent%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009060 - aerobic respiration;codon_start=1;transl_table=11;product=D-lactate dehydrogenase%2C FAD-binding%2C NADH independent;protein_id=AAC75194.1;db_xref=GI:1788454;db_xref=ASAP:ABE-0007048;db_xref=UniProtKB/Swiss-Prot:P06149;db_xref=EcoGene:EG10231 EMBL repeat_region 2223905 2223932 . + . ID=.4663;note=REP153 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 2223938 2224870 . - . ID=.4664;gene=pbpG;locus_tag=b2134;gene_synonym=ECK2127;gene_synonym=JW5355;gene_synonym=psv;gene_synonym=yohB;db_xref=EcoGene:EG12015 EMBL CDS 2223938 2224870 . - 0 ID=.4665;gene=pbpG;locus_tag=b2134;gene_synonym=ECK2127;gene_synonym=JW5355;gene_synonym=psv;gene_synonym=yohB;function=putative enzyme%3B Murein sacculus%2C peptidoglycan;note=penicillin-binding protein 7%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0009252 - peptidoglycan biosynthetic process%3B GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=D-alanyl-D-alanine endopeptidase;protein_id=AAC75195.2;db_xref=GI:87082054;db_xref=ASAP:ABE-0007050;db_xref=UniProtKB/Swiss-Prot:P0AFI5;db_xref=EcoGene:EG12015 EMBL gene 2225044 2225631 . - . ID=.4666;gene=yohC;locus_tag=b2135;gene_synonym=ECK2128;gene_synonym=JW5356;db_xref=EcoGene:EG12016 EMBL CDS 2225044 2225631 . - 0 ID=.4667;gene=yohC;locus_tag=b2135;gene_synonym=ECK2128;gene_synonym=JW5356;codon_start=1;transl_table=11;product=Yip1 family inner membrane protein;protein_id=AAC75196.2;db_xref=GI:87082055;db_xref=ASAP:ABE-0007053;db_xref=UniProtKB/Swiss-Prot:P0AD17;db_xref=EcoGene:EG12016 EMBL gene 2225801 2226379 . + . ID=.4668;gene=yohD;locus_tag=b2136;gene_synonym=ECK2129;gene_synonym=JW2124;db_xref=EcoGene:EG12017 EMBL CDS 2225801 2226379 . + 0 ID=.4669;gene=yohD;locus_tag=b2136;gene_synonym=ECK2129;gene_synonym=JW2124;note=GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=DedA family inner membrane protein;protein_id=AAC75197.2;db_xref=GI:87082056;db_xref=ASAP:ABE-0007059;db_xref=UniProtKB/Swiss-Prot:P33366;db_xref=EcoGene:EG12017 EMBL repeat_region 2226385 2226468 . + . ID=.4670;note=REP154 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 2226509 2227270 . - . ID=.4671;gene=yohF;locus_tag=b2137;gene_synonym=ECK2130;gene_synonym=JW2125;gene_synonym=yohE;db_xref=EcoGene:EG12019 EMBL CDS 2226509 2227270 . - 0 ID=.4672;gene=yohF;locus_tag=b2137;gene_synonym=ECK2130;gene_synonym=JW2125;gene_synonym=yohE;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=putative oxidoreductase;protein_id=AAC75198.1;db_xref=GI:1788459;db_xref=ASAP:ABE-0007062;db_xref=UniProtKB/Swiss-Prot:P33368;db_xref=EcoGene:EG12019 EMBL gene 2227323 2228758 . - . ID=.4673;gene=mdtQ;locus_tag=b2139;gene_synonym=ECK2131;gene_synonym=JW5838;gene_synonym=yohG;gene_synonym=yohH;pseudo=true;db_xref=EcoGene:EG12020 EMBL biological_region 2227323 2228758 . - 0 ID=.4674;featflags=type:CDS;gene=mdtQ;locus_tag=b2139;gene_synonym=ECK2131;gene_synonym=JW5838;gene_synonym=yohG;gene_synonym=yohH;note=pseudogene%3B putative channel/filament proteins%3B GO_component: GO:0009274 - peptidoglycan-based cell wall;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0007067;db_xref=ASAP:ABE-0007071;db_xref=UniProtKB/Swiss-Prot:P33369;db_xref=EcoGene:EG12020 EMBL CDS 2227323 2228609 . - 0 Parent=.4674 EMBL CDS 2228609 2228758 . - 0 Parent=.4674 EMBL gene 2228982 2229065 . + . ID=.4677;gene=yohP;locus_tag=b4679;gene_synonym=ECK4494;db_xref=EcoGene:EG14484 EMBL CDS 2228982 2229065 . + 0 ID=.4678;gene=yohP;locus_tag=b4679;gene_synonym=ECK4494;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=ACO60001.1;db_xref=GI:226510959;db_xref=UniProtKB/Swiss-Prot:C1P609;db_xref=EcoGene:EG14484 EMBL gene 2229438 2230385 . - . ID=.4679;gene=dusC;locus_tag=b2140;gene_synonym=ECK2133;gene_synonym=JW2128;gene_synonym=yohI;db_xref=EcoGene:EG12022 EMBL CDS 2229438 2230385 . - 0 ID=.4680;gene=dusC;locus_tag=b2140;gene_synonym=ECK2133;gene_synonym=JW2128;gene_synonym=yohI;function=enzyme%3B tRNA modification;note=putative regulator protein;codon_start=1;transl_table=11;product=tRNA-dihydrouridine synthase C;protein_id=AAC75201.1;db_xref=GI:1788462;db_xref=ASAP:ABE-0007074;db_xref=UniProtKB/Swiss-Prot:P33371;db_xref=EcoGene:EG12022 EMBL gene 2230624 2231022 . + . ID=.4681;gene=yohJ;locus_tag=b2141;gene_synonym=ECK2134;gene_synonym=JW2129;db_xref=EcoGene:EG12023 EMBL CDS 2230624 2231022 . + 0 ID=.4682;gene=yohJ;locus_tag=b2141;gene_synonym=ECK2134;gene_synonym=JW2129;codon_start=1;transl_table=11;product=UPF0299 family inner membrane protein;protein_id=AAC75202.1;db_xref=GI:1788463;db_xref=ASAP:ABE-0007078;db_xref=UniProtKB/Swiss-Prot:P60632;db_xref=EcoGene:EG12023 EMBL gene 2231019 2231714 . + . ID=.4683;gene=yohK;locus_tag=b2142;gene_synonym=ECK2135;gene_synonym=JW2130;db_xref=EcoGene:EG12024 EMBL CDS 2231019 2231714 . + 0 ID=.4684;gene=yohK;locus_tag=b2142;gene_synonym=ECK2135;gene_synonym=JW2130;function=putative transport%3B Not classified;note=putative seritonin transporter;codon_start=1;transl_table=11;product=LrgB family inner membrane protein;protein_id=AAC75203.1;db_xref=GI:1788464;db_xref=ASAP:ABE-0007080;db_xref=UniProtKB/Swiss-Prot:P0AD19;db_xref=EcoGene:EG12024 EMBL gene 2231844 2232728 . + . ID=.4685;gene=cdd;locus_tag=b2143;gene_synonym=ECK2136;gene_synonym=JW2131;db_xref=EcoGene:EG10137 EMBL CDS 2231844 2232728 . + 0 ID=.4686;gene=cdd;locus_tag=b2143;gene_synonym=ECK2136;gene_synonym=JW2131;ec_number=3.5.4.5;function=enzyme%3B Salvage of nucleosides and nucleotides;experiment=N-terminus verified by Edman degradation: PMID 1567863%2C2692708%2C8506346%2C18482579;note=GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion;codon_start=1;transl_table=11;product=cytidine/deoxycytidine deaminase;protein_id=AAC75204.1;db_xref=GI:1788465;db_xref=ASAP:ABE-0007086;db_xref=UniProtKB/Swiss-Prot:P0ABF6;db_xref=EcoGene:EG10137 EMBL repeat_region 2232736 2232769 . + . ID=.4687;note=REP155 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 2232878 2233597 . + . ID=.4688;gene=sanA;locus_tag=b2144;gene_synonym=ECK2137;gene_synonym=JW2132;gene_synonym=sfiX;gene_synonym=yeiF;db_xref=EcoGene:EG12025 EMBL CDS 2232878 2233597 . + 0 ID=.4689;gene=sanA;locus_tag=b2144;gene_synonym=ECK2137;gene_synonym=JW2132;gene_synonym=sfiX;gene_synonym=yeiF;function=transport%3B Drug/analog sensitivity;note=vancomycin sensitivity%3B sanA mutant has a defective envelope more permeable to vancomycin at 42 degrees%3B GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=DUF218 superfamily vancomycin high temperature exclusion protein;protein_id=AAC75205.1;db_xref=GI:1788466;db_xref=ASAP:ABE-0007091;db_xref=UniProtKB/Swiss-Prot:P0AFY2;db_xref=EcoGene:EG12025 EMBL gene 2233600 2233839 . + . ID=.4690;gene=yeiS;locus_tag=b2145;gene_synonym=ECK2138;gene_synonym=JW5359;db_xref=EcoGene:EG14073 EMBL CDS 2233600 2233839 . + 0 ID=.4691;gene=yeiS;locus_tag=b2145;gene_synonym=ECK2138;gene_synonym=JW5359;codon_start=1;transl_table=11;product=DUF2542 family protein;protein_id=AAC75206.1;db_xref=GI:1788467;db_xref=ASAP:ABE-0007093;db_xref=UniProtKB/Swiss-Prot:P64536;db_xref=EcoGene:EG14073 EMBL gene 2234033 2235271 . + . ID=.4692;gene=preT;locus_tag=b2146;gene_synonym=dpdA;gene_synonym=ECK2139;gene_synonym=JW2133;gene_synonym=preB;gene_synonym=yeiT;db_xref=EcoGene:EG14074 EMBL CDS 2234033 2235271 . + 0 ID=.4693;gene=preT;locus_tag=b2146;gene_synonym=dpdA;gene_synonym=ECK2139;gene_synonym=JW2133;gene_synonym=preB;gene_synonym=yeiT;function=enzyme%3B pyrimidine metabolism;experiment=N-terminus verified by Edman degradation: PMID 18482579;note=putative oxidoreductase;codon_start=1;transl_table=11;product=dihydropyrimidine dehydrogenase%2C NADH-dependent%2C subunit N;protein_id=AAC75207.1;db_xref=GI:1788468;db_xref=ASAP:ABE-0007096;db_xref=UniProtKB/Swiss-Prot:P76440;db_xref=EcoGene:EG14074 EMBL gene 2235265 2236500 . + . ID=.4694;gene=preA;locus_tag=b2147;gene_synonym=ECK2140;gene_synonym=JW2134;gene_synonym=yeiA;db_xref=EcoGene:EG11289 EMBL CDS 2235265 2236500 . + 0 ID=.4695;gene=preA;locus_tag=b2147;gene_synonym=ECK2140;gene_synonym=JW2134;gene_synonym=yeiA;function=enzyme%3B pyrimidine metabolism;experiment=N-terminus verified by Edman degradation: PMID 18482579;note=putative oxidoreductase;codon_start=1;transl_table=11;product=dihydropyrimidine dehydrogenase%2C NADH-dependent%2C subunit C;protein_id=AAC75208.2;db_xref=GI:87082059;db_xref=ASAP:ABE-0007098;db_xref=UniProtKB/Swiss-Prot:P25889;db_xref=EcoGene:EG11289 EMBL repeat_region 2236534 2236683 . + . ID=.4696;note=REP156 (repetitive extragenic palindromic) element%3B contains 3 REP sequences EMBL gene 2236743 2237753 . - . ID=.4697;gene=mglC;locus_tag=b2148;gene_synonym=ECK2141;gene_synonym=JW2135;gene_synonym=mglP;db_xref=EcoGene:EG10594 EMBL CDS 2236743 2237753 . - 0 ID=.4698;gene=mglC;locus_tag=b2148;gene_synonym=ECK2141;gene_synonym=JW2135;gene_synonym=mglP;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=methyl-galactoside transport and galactose taxis%3B membrane component of ABC superfamily%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=methyl-galactoside transporter subunit;protein_id=AAC75209.1;db_xref=GI:1788471;db_xref=ASAP:ABE-0007101;db_xref=UniProtKB/Swiss-Prot:P23200;db_xref=EcoGene:EG10594 EMBL gene 2237769 2239289 . - . ID=.4699;gene=mglA;locus_tag=b2149;gene_synonym=ECK2142;gene_synonym=JW2136;gene_synonym=mglP;db_xref=EcoGene:EG10592 EMBL CDS 2237769 2239289 . - 0 ID=.4700;gene=mglA;locus_tag=b2149;gene_synonym=ECK2142;gene_synonym=JW2136;gene_synonym=mglP;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=ATP-binding component of methyl-galactoside transport and galactose taxis%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=methyl-galactoside ABC transporter ATPase;protein_id=AAC75210.1;db_xref=GI:1788472;db_xref=ASAP:ABE-0007103;db_xref=UniProtKB/Swiss-Prot:P0AAG8;db_xref=EcoGene:EG10592 EMBL gene 2239350 2240348 . - . ID=.4701;gene=mglB;locus_tag=b2150;gene_synonym=ECK2143;gene_synonym=JW2137;db_xref=EcoGene:EG10593 EMBL CDS 2239350 2240348 . - 0 ID=.4702;gene=mglB;locus_tag=b2150;gene_synonym=ECK2143;gene_synonym=JW2137;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=galactose-binding transport protein%3B receptor for galactose taxis%3B periplasmic-binding component of ABC superfamily%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=methyl-galactoside transporter subunit;protein_id=AAC75211.1;db_xref=GI:1788473;db_xref=ASAP:ABE-0007108;db_xref=UniProtKB/Swiss-Prot:P0AEE5;db_xref=EcoGene:EG10593 EMBL gene 2240628 2241668 . - . ID=.4703;gene=galS;locus_tag=b2151;gene_synonym=ECK2144;gene_synonym=JW2138;gene_synonym=mglD;db_xref=EcoGene:EG10365 EMBL CDS 2240628 2241668 . - 0 ID=.4704;gene=galS;locus_tag=b2151;gene_synonym=ECK2144;gene_synonym=JW2138;gene_synonym=mglD;function=regulator%3B Degradation of small molecules: Carbon compounds;experiment=N-terminus verified by Edman degradation: PMID 8982002;note=mgl repressor%2C galactose operon inducer%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=galactose- and fucose-inducible galactose regulon transcriptional isorepressor%3B mgl operon transcriptional repressor%3B autorepressor;protein_id=AAC75212.1;db_xref=GI:1788474;db_xref=ASAP:ABE-0007110;db_xref=UniProtKB/Swiss-Prot:P25748;db_xref=EcoGene:EG10365 EMBL gene 2241810 2242967 . - . ID=.4705;gene=yeiB;locus_tag=b2152;gene_synonym=ECK2145;gene_synonym=JW2139;db_xref=EcoGene:EG11290 EMBL CDS 2241810 2242967 . - 0 ID=.4706;gene=yeiB;locus_tag=b2152;gene_synonym=ECK2145;gene_synonym=JW2139;codon_start=1;transl_table=11;product=DUF418 family putative inner membrane protein;protein_id=AAC75213.1;db_xref=GI:1788475;db_xref=ASAP:ABE-0007115;db_xref=UniProtKB/Swiss-Prot:P25747;db_xref=EcoGene:EG11290 EMBL gene 2242984 2243652 . - . ID=.4707;gene=folE;locus_tag=b2153;gene_synonym=ECK2146;gene_synonym=JW2140;db_xref=EcoGene:EG11375 EMBL CDS 2242984 2243652 . - 0 ID=.4708;gene=folE;locus_tag=b2153;gene_synonym=ECK2146;gene_synonym=JW2140;ec_number=3.5.4.16;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Folic acid;note=GO_process: GO:0046656 - folic acid biosynthetic process;codon_start=1;transl_table=11;product=GTP cyclohydrolase I;protein_id=AAC75214.1;db_xref=GI:1788476;db_xref=ASAP:ABE-0007117;db_xref=UniProtKB/Swiss-Prot:P0A6T5;db_xref=EcoGene:EG11375 EMBL gene 2243910 2244746 . + . ID=.4709;gene=yeiG;locus_tag=b2154;gene_synonym=ECK2147;gene_synonym=JW2141;db_xref=EcoGene:EG12026 EMBL CDS 2243910 2244746 . + 0 ID=.4710;gene=yeiG;locus_tag=b2154;gene_synonym=ECK2147;gene_synonym=JW2141;ec_number=3.1.1.-;function=enzyme%3B Formaldehyde degradation;note=putative esterase;codon_start=1;transl_table=11;product=S-formylglutathione hydrolase;protein_id=AAC75215.1;db_xref=GI:1788477;db_xref=ASAP:ABE-0007124;db_xref=UniProtKB/Swiss-Prot:P33018;db_xref=EcoGene:EG12026 EMBL gene 2244778 2246769 . - . ID=.4711;gene=cirA;locus_tag=b2155;gene_synonym=cir;gene_synonym=ECK2148;gene_synonym=feuA;gene_synonym=JW2142;db_xref=EcoGene:EG10155 EMBL CDS 2244778 2246769 . - 0 ID=.4712;gene=cirA;locus_tag=b2155;gene_synonym=cir;gene_synonym=ECK2148;gene_synonym=feuA;gene_synonym=JW2142;function=membrane%3B Outer membrane constituents;note=ferric iron outer membrane transporter%2C TonB-dependent%3B surface receptor and translocator for colicin I%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane;codon_start=1;transl_table=11;product=colicin IA outer membrane receptor and translocator%3B ferric iron-catecholate transporter;protein_id=AAC75216.1;db_xref=GI:1788478;db_xref=ASAP:ABE-0007126;db_xref=UniProtKB/Swiss-Prot:P17315;db_xref=EcoGene:EG10155 EMBL gene 2247063 2248532 . - . ID=.4713;gene=lysP;locus_tag=b2156;gene_synonym=cadR;gene_synonym=ECK2149;gene_synonym=JW2143;db_xref=EcoGene:EG11337 EMBL CDS 2247063 2248532 . - 0 ID=.4714;gene=lysP;locus_tag=b2156;gene_synonym=cadR;gene_synonym=ECK2149;gene_synonym=JW2143;function=transport%3B Transport of small molecules: Amino acids%2C amines;note=lysine-specific permease%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009089 - lysine biosynthetic process via diaminopimelate;codon_start=1;transl_table=11;product=lysine transporter;protein_id=AAC75217.1;db_xref=GI:1788480;db_xref=ASAP:ABE-0007131;db_xref=UniProtKB/Swiss-Prot:P25737;db_xref=EcoGene:EG11337 EMBL gene 2248737 2249618 . - . ID=.4715;gene=yeiE;locus_tag=b2157;gene_synonym=ECK2150;gene_synonym=JW2144;db_xref=EcoGene:EG12105 EMBL CDS 2248737 2249618 . - 0 ID=.4716;gene=yeiE;locus_tag=b2157;gene_synonym=ECK2150;gene_synonym=JW2144;function=putative regulator%3B Not classified;note=putative transcriptional regulator LYSR-type%3B GO_function: GO:0016563 - transcription activator activity%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=putative DNA-binding transcriptional regulator;protein_id=AAC75218.1;db_xref=GI:1788481;db_xref=ASAP:ABE-0007138;db_xref=UniProtKB/Swiss-Prot:P0ACR4;db_xref=EcoGene:EG12105 EMBL gene 2249717 2250766 . + . ID=.4717;gene=yeiH;locus_tag=b2158;gene_synonym=ECK2151;gene_synonym=JW2145;db_xref=EcoGene:EG12027 EMBL CDS 2249717 2250766 . + 0 ID=.4718;gene=yeiH;locus_tag=b2158;gene_synonym=ECK2151;gene_synonym=JW2145;codon_start=1;transl_table=11;product=UPF0324 family inner membrane protein;protein_id=AAC75219.1;db_xref=GI:1788482;db_xref=ASAP:ABE-0007142;db_xref=UniProtKB/Swiss-Prot:P62723;db_xref=EcoGene:EG12027 EMBL gene 2250840 2251697 . + . ID=.4719;gene=nfo;locus_tag=b2159;gene_synonym=ECK2152;gene_synonym=JW2146;db_xref=EcoGene:EG10651 EMBL CDS 2250840 2251697 . + 0 ID=.4720;gene=nfo;locus_tag=b2159;gene_synonym=ECK2152;gene_synonym=JW2146;ec_number=3.1.21.2;function=enzyme%3B Degradation of DNA;note=endonuclease IV%3B GO_process: GO:0006308 - DNA catabolic process%3B GO_process: GO:0009314 - response to radiation;codon_start=1;transl_table=11;product=endonuclease IV with intrinsic 3'-5' exonuclease activity;protein_id=AAC75220.1;db_xref=GI:1788483;db_xref=ASAP:ABE-0007146;db_xref=UniProtKB/Swiss-Prot:P0A6C1;db_xref=EcoGene:EG10651 EMBL gene 2251700 2252788 . + . ID=.4721;gene=yeiI;locus_tag=b2160;gene_synonym=ECK2153;gene_synonym=JW2147;db_xref=EcoGene:EG12028 EMBL CDS 2251700 2252788 . + 0 ID=.4722;gene=yeiI;locus_tag=b2160;gene_synonym=ECK2153;gene_synonym=JW2147;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=putative kinase;protein_id=AAC75221.1;db_xref=GI:1788484;db_xref=ASAP:ABE-0007149;db_xref=UniProtKB/Swiss-Prot:P33020;db_xref=EcoGene:EG12028 EMBL repeat_region 2252796 2252886 . + . ID=.4723;note=RIP157 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 2252895 2254145 . - . ID=.4724;gene=nupX;locus_tag=b2161;gene_synonym=ECK2154;gene_synonym=JW2148;gene_synonym=yeiJ;db_xref=EcoGene:EG12029 EMBL CDS 2252895 2254145 . - 0 ID=.4725;gene=nupX;locus_tag=b2161;gene_synonym=ECK2154;gene_synonym=JW2148;gene_synonym=yeiJ;function=putative transport%3B Not classified;note=putative pyrimidine nucleoside transporter%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=nucleoside permease;protein_id=AAC75222.1;db_xref=GI:1788485;db_xref=ASAP:ABE-0007152;db_xref=UniProtKB/Swiss-Prot:P33021;db_xref=EcoGene:EG12029 EMBL gene 2254245 2255186 . - . ID=.4726;gene=rihB;locus_tag=b2162;gene_synonym=ECK2155;gene_synonym=JW2149;gene_synonym=yeiK;db_xref=EcoGene:EG12030 EMBL CDS 2254245 2255186 . - 0 ID=.4727;gene=rihB;locus_tag=b2162;gene_synonym=ECK2155;gene_synonym=JW2149;gene_synonym=yeiK;ec_number=3.2.2.-;codon_start=1;transl_table=11;product=ribonucleoside hydrolase 2;protein_id=AAC75223.1;db_xref=GI:1788486;db_xref=ASAP:ABE-0007156;db_xref=UniProtKB/Swiss-Prot:P33022;db_xref=EcoGene:EG12030 EMBL gene 2255355 2256014 . + . ID=.4728;gene=yeiL;locus_tag=b2163;gene_synonym=ECK2156;gene_synonym=JW2150;db_xref=EcoGene:EG12031 EMBL CDS 2255355 2256014 . + 0 ID=.4729;gene=yeiL;locus_tag=b2163;gene_synonym=ECK2156;gene_synonym=JW2150;function=putative regulator%3B Not classified;note=stationary phase nitrogen starvation regulator%3B GO_process: GO:0006355 - regulation of transcription%2C DNA-dependent;codon_start=1;transl_table=11;product=putative transcriptional regulator;protein_id=AAC75224.1;db_xref=GI:1788487;db_xref=ASAP:ABE-0007160;db_xref=UniProtKB/Swiss-Prot:P0A9E9;db_xref=EcoGene:EG12031 EMBL repeat_region 2256038 2256074 . + . ID=.4730;note=REP158 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 2256085 2257335 . - . ID=.4731;gene=psuT;locus_tag=b2164;gene_synonym=ECK2157;gene_synonym=JW2151;gene_synonym=pscT;gene_synonym=yeiM;db_xref=EcoGene:EG12032 EMBL CDS 2256085 2257335 . - 0 ID=.4732;gene=psuT;locus_tag=b2164;gene_synonym=ECK2157;gene_synonym=JW2151;gene_synonym=pscT;gene_synonym=yeiM;function=putative transport%3B Not classified;note=putative transport system permease protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative nucleoside transporter;protein_id=AAC75225.1;db_xref=GI:1788488;db_xref=ASAP:ABE-0007163;db_xref=UniProtKB/Swiss-Prot:P33024;db_xref=EcoGene:EG12032 EMBL gene 2257429 2258367 . - . ID=.4733;gene=psuG;locus_tag=b2165;gene_synonym=ECK2158;gene_synonym=JW2152;gene_synonym=pscG;gene_synonym=yeiN;db_xref=EcoGene:EG12033 EMBL CDS 2257429 2258367 . - 0 ID=.4734;gene=psuG;locus_tag=b2165;gene_synonym=ECK2158;gene_synonym=JW2152;gene_synonym=pscG;gene_synonym=yeiN;function=enzyme%3B pseudouridine catabolism;codon_start=1;transl_table=11;product=pseudouridine 5'-phosphate glycosidase;protein_id=AAC75226.1;db_xref=GI:1788490;db_xref=ASAP:ABE-0007165;db_xref=UniProtKB/Swiss-Prot:P33025;db_xref=EcoGene:EG12033 EMBL gene 2258355 2259296 . - . ID=.4735;gene=psuK;locus_tag=b2166;gene_synonym=ECK2159;gene_synonym=JW2153;gene_synonym=pscK;gene_synonym=yeiC;db_xref=EcoGene:EG11646 EMBL CDS 2258355 2259296 . - 0 ID=.4736;gene=psuK;locus_tag=b2166;gene_synonym=ECK2159;gene_synonym=JW2153;gene_synonym=pscK;gene_synonym=yeiC;function=enzyme%3B pseudouridine utilization;note=putative kinase;codon_start=1;transl_table=11;product=pseudouridine kinase;protein_id=AAC75227.1;db_xref=GI:1788491;db_xref=ASAP:ABE-0007168;db_xref=UniProtKB/Swiss-Prot:P30235;db_xref=EcoGene:EG11646 EMBL gene 2259719 2261410 . - . ID=.4737;gene=fruA;locus_tag=b2167;gene_synonym=ECK2160;gene_synonym=JW2154;gene_synonym=ptsF;db_xref=EcoGene:EG10336 EMBL CDS 2259719 2261410 . - 0 ID=.4738;gene=fruA;locus_tag=b2167;gene_synonym=ECK2160;gene_synonym=JW2154;gene_synonym=ptsF;function=regulator%3B Degradation of small molecules: Carbon compounds;note=PTS system%2C fructose-specific transport protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=fused fructose-specific PTS enzymes: IIBcomponent/IIC components;protein_id=AAC75228.1;db_xref=GI:1788492;db_xref=ASAP:ABE-0007172;db_xref=UniProtKB/Swiss-Prot:P20966;db_xref=EcoGene:EG10336 EMBL gene 2261427 2262365 . - . ID=.4739;gene=fruK;locus_tag=b2168;gene_synonym=ECK2161;gene_synonym=fpk;gene_synonym=JW2155;db_xref=EcoGene:EG10337 EMBL CDS 2261427 2262365 . - 0 ID=.4740;gene=fruK;locus_tag=b2168;gene_synonym=ECK2161;gene_synonym=fpk;gene_synonym=JW2155;ec_number=2.7.1.56;function=enzyme%3B Energy metabolism%2C carbon: Glycolysis;note=GO_process: GO:0006096 - glycolysis;codon_start=1;transl_table=11;product=fructose-1-phosphate kinase;protein_id=AAC75229.1;db_xref=GI:1788493;db_xref=ASAP:ABE-0007174;db_xref=UniProtKB/Swiss-Prot:P0AEW9;db_xref=EcoGene:EG10337 EMBL gene 2262365 2263495 . - . ID=.4741;gene=fruB;locus_tag=b2169;gene_synonym=ECK2162;gene_synonym=fpr;gene_synonym=fruF;gene_synonym=JW2156;db_xref=EcoGene:EG10005 EMBL CDS 2262365 2263495 . - 0 ID=.4742;gene=fruB;locus_tag=b2169;gene_synonym=ECK2162;gene_synonym=fpr;gene_synonym=fruF;gene_synonym=JW2156;ec_number=2.7.1.69;function=enzyme%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=PTS system%2C fructose-specific IIA/fpr component%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=fused fructose-specific PTS enzymes: IIA component/HPr component;protein_id=AAC75230.1;db_xref=GI:1788494;db_xref=ASAP:ABE-0007180;db_xref=UniProtKB/Swiss-Prot:P69811;db_xref=EcoGene:EG10005 EMBL gene 2263863 2265044 . + . ID=.4743;gene=setB;locus_tag=b2170;gene_synonym=ECK2163;gene_synonym=JW2157;gene_synonym=yeiO;db_xref=EcoGene:EG12034 EMBL CDS 2263863 2265044 . + 0 ID=.4744;gene=setB;locus_tag=b2170;gene_synonym=ECK2163;gene_synonym=JW2157;gene_synonym=yeiO;function=orf%3B Not classified;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=lactose/glucose efflux system;protein_id=AAC75231.1;db_xref=GI:1788495;db_xref=ASAP:ABE-0007184;db_xref=UniProtKB/Swiss-Prot:P33026;db_xref=EcoGene:EG12034 EMBL gene 2265041 2265295 . - . ID=.4745;gene=yeiW;locus_tag=b4502;gene_synonym=ECK2164;gene_synonym=JW5361;db_xref=EcoGene:EG14375 EMBL CDS 2265041 2265295 . - 0 ID=.4746;gene=yeiW;locus_tag=b4502;gene_synonym=ECK2164;gene_synonym=JW5361;note=GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=UPF0153 cysteine cluster protein;protein_id=ABD18689.1;db_xref=GI:87082060;db_xref=ASAP:ABE-0285016;db_xref=UniProtKB/Swiss-Prot:P0AFT8;db_xref=EcoGene:EG14375 EMBL gene 2265450 2266022 . + . ID=.4747;gene=yeiP;locus_tag=b2171;gene_synonym=ECK2165;gene_synonym=JW5362;db_xref=EcoGene:EG12035 EMBL CDS 2265450 2266022 . + 0 ID=.4748;gene=yeiP;locus_tag=b2171;gene_synonym=ECK2165;gene_synonym=JW5362;note=putative elongation factor%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=elongation factor P-like protein;protein_id=AAC75232.2;db_xref=GI:87082061;db_xref=ASAP:ABE-0007187;db_xref=UniProtKB/Swiss-Prot:P0A6N8;db_xref=EcoGene:EG12035 EMBL gene 2266245 2267711 . + . ID=.4749;gene=yeiQ;locus_tag=b2172;gene_synonym=ECK2166;gene_synonym=JW2160;db_xref=EcoGene:EG12036 EMBL CDS 2266245 2267711 . + 0 ID=.4750;gene=yeiQ;locus_tag=b2172;gene_synonym=ECK2166;gene_synonym=JW2160;function=putative enzyme%3B Not classified;note=putative oxidoreductase;codon_start=1;transl_table=11;product=putative NAD-dependent D-mannonate oxidoreductase;protein_id=AAC75233.1;db_xref=GI:1788497;db_xref=ASAP:ABE-0007191;db_xref=UniProtKB/Swiss-Prot:P33029;db_xref=EcoGene:EG12036 EMBL gene 2267829 2268815 . + . ID=.4751;gene=yeiR;locus_tag=b2173;gene_synonym=ECK2167;gene_synonym=JW2161;db_xref=EcoGene:EG12104 EMBL CDS 2267829 2268815 . + 0 ID=.4752;gene=yeiR;locus_tag=b2173;gene_synonym=ECK2167;gene_synonym=JW2161;function=enzyme%3B Not classified;codon_start=1;transl_table=11;product=Zn-stimulated GTPase involved in zinc homeostasis%3B mutants are cadmium and EDTA sensitive%3B Zn(2+) binding protein;protein_id=AAC75234.1;db_xref=GI:1788499;db_xref=ASAP:ABE-0007194;db_xref=UniProtKB/Swiss-Prot:P33030;db_xref=EcoGene:EG12104 EMBL gene 2268854 2269567 . + . ID=.4753;gene=lpxT;locus_tag=b2174;gene_synonym=ECK2168;gene_synonym=JW2162;gene_synonym=yeiU;db_xref=EcoGene:EG14075 EMBL CDS 2268854 2269567 . + 0 ID=.4754;gene=lpxT;locus_tag=b2174;gene_synonym=ECK2168;gene_synonym=JW2162;gene_synonym=yeiU;codon_start=1;transl_table=11;product=lipid A 1-diphosphate synthase%3B undecaprenyl pyrophosphate:lipid A 1-phosphate phosphotransferase;protein_id=AAC75235.2;db_xref=GI:87082062;db_xref=ASAP:ABE-0007196;db_xref=UniProtKB/Swiss-Prot:P76445;db_xref=EcoGene:EG14075 EMBL gene 2269979 2270545 . + . ID=.4755;gene=mepS;locus_tag=b2175;gene_synonym=ECK2169;gene_synonym=JW2163;gene_synonym=spr;gene_synonym=yeiV;db_xref=EcoGene:EG14076 EMBL CDS 2269979 2270545 . + 0 ID=.4756;gene=mepS;locus_tag=b2175;gene_synonym=ECK2169;gene_synonym=JW2163;gene_synonym=spr;gene_synonym=yeiV;function=enzyme%3B Murein sacculus%2C peptidoglycan;note=putative lipoprotein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=murein DD-endopeptidase%2C space-maker hydrolase%2C mutational suppressor of prc thermosensitivity%2C outer membrane lipoprotein%2C weak murein LD-carboxypeptidase;protein_id=AAC75236.1;db_xref=GI:1788501;db_xref=ASAP:ABE-0007200;db_xref=UniProtKB/Swiss-Prot:P0AFV4;db_xref=EcoGene:EG14076 EMBL gene 2270726 2272282 . + . ID=.4757;gene=rtn;locus_tag=b2176;gene_synonym=ECK2170;gene_synonym=JW2164;db_xref=EcoGene:EG14077 EMBL CDS 2270726 2272282 . + 0 ID=.4758;gene=rtn;locus_tag=b2176;gene_synonym=ECK2170;gene_synonym=JW2164;codon_start=1;transl_table=11;product=resistance protein for phages lambda and N4%2C putative membrane-anchored cyclic-di-GMP phosphodiesterase;protein_id=AAC75237.1;db_xref=GI:1788502;db_xref=ASAP:ABE-0007203;db_xref=UniProtKB/Swiss-Prot:P76446;db_xref=EcoGene:EG14077 EMBL gene 2272364 2274178 . + . ID=.4759;gene=yejA;locus_tag=b2177;gene_synonym=ECK2171;gene_synonym=JW2165;db_xref=EcoGene:EG12037 EMBL CDS 2272364 2274178 . + 0 ID=.4760;gene=yejA;locus_tag=b2177;gene_synonym=ECK2171;gene_synonym=JW2165;note=periplasmic-binding component of ABC superfamily%3B GO_component: GO:0042597 - periplasmic space;codon_start=1;transl_table=11;product=microcin C ABC transporter periplasmic binding protein;protein_id=AAC75238.2;db_xref=GI:87082063;db_xref=ASAP:ABE-0007206;db_xref=UniProtKB/Swiss-Prot:P33913;db_xref=EcoGene:EG12037 EMBL gene 2274179 2275273 . + . ID=.4761;gene=yejB;locus_tag=b2178;gene_synonym=ECK2172;gene_synonym=JW2166;db_xref=EcoGene:EG12038 EMBL CDS 2274179 2275273 . + 0 ID=.4762;gene=yejB;locus_tag=b2178;gene_synonym=ECK2172;gene_synonym=JW2166;function=putative transport%3B Not classified;note=putative transport system permease protein%3B membrane component of ABC superfamily%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=microcin C ABC transporter permease;protein_id=AAC75239.1;db_xref=GI:1788504;db_xref=ASAP:ABE-0007208;db_xref=UniProtKB/Swiss-Prot:P0AFU0;db_xref=EcoGene:EG12038 EMBL gene 2275273 2276298 . + . ID=.4763;gene=yejE;locus_tag=b2179;gene_synonym=ECK2173;gene_synonym=JW2167;db_xref=EcoGene:EG12040 EMBL CDS 2275273 2276298 . + 0 ID=.4764;gene=yejE;locus_tag=b2179;gene_synonym=ECK2173;gene_synonym=JW2167;function=putative transport%3B Not classified;note=putative transport system permease protein%3B membrane component of ABC superfamily%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=microcin C ABC transporter permease;protein_id=AAC75240.1;db_xref=GI:1788505;db_xref=ASAP:ABE-0007210;db_xref=UniProtKB/Swiss-Prot:P33915;db_xref=EcoGene:EG12040 EMBL gene 2276300 2277889 . + . ID=.4765;gene=yejF;locus_tag=b2180;gene_synonym=ECK2174;gene_synonym=JW2168;db_xref=EcoGene:EG12041 EMBL CDS 2276300 2277889 . + 0 ID=.4766;gene=yejF;locus_tag=b2180;gene_synonym=ECK2174;gene_synonym=JW2168;function=putative transport%3B Not classified;note=putative ATP-binding component of a transport system%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=microcin C ABC transporter ATPase;protein_id=AAC75241.1;db_xref=GI:1788506;db_xref=ASAP:ABE-0007212;db_xref=UniProtKB/Swiss-Prot:P33916;db_xref=EcoGene:EG12041 EMBL gene 2277893 2278237 . - . ID=.4767;gene=yejG;locus_tag=b2181;gene_synonym=ECK2175;gene_synonym=JW2169;db_xref=EcoGene:EG12042 EMBL CDS 2277893 2278237 . - 0 ID=.4768;gene=yejG;locus_tag=b2181;gene_synonym=ECK2175;gene_synonym=JW2169;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC75242.1;db_xref=GI:1788507;db_xref=ASAP:ABE-0007214;db_xref=UniProtKB/Swiss-Prot:P0AD21;db_xref=EcoGene:EG12042 EMBL gene 2278570 2279760 . - . ID=.4769;gene=bcr;locus_tag=b2182;gene_synonym=bicA;gene_synonym=bicR;gene_synonym=ECK2176;gene_synonym=JW5363;gene_synonym=sur;gene_synonym=suxA;db_xref=EcoGene:EG11419 EMBL CDS 2278570 2279760 . - 0 ID=.4770;gene=bcr;locus_tag=b2182;gene_synonym=bicA;gene_synonym=bicR;gene_synonym=ECK2176;gene_synonym=JW5363;gene_synonym=sur;gene_synonym=suxA;function=transport%3B Drug/analog sensitivity;note=bicyclomycin resistance protein%3B transmembrane protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=bicyclomycin/cysteine/sulfonamide efflux transporter;protein_id=AAC75243.1;db_xref=GI:1788509;db_xref=ASAP:ABE-0007221;db_xref=UniProtKB/Swiss-Prot:P28246;db_xref=EcoGene:EG11419 EMBL gene 2279788 2280483 . - . ID=.4771;gene=rsuA;locus_tag=b2183;gene_synonym=ECK2177;gene_synonym=JW2171;gene_synonym=yejD;db_xref=EcoGene:EG12044 EMBL CDS 2279788 2280483 . - 0 ID=.4772;gene=rsuA;locus_tag=b2183;gene_synonym=ECK2177;gene_synonym=JW2171;gene_synonym=yejD;ec_number=4.2.1.70;function=enzyme%3B rRNA modification;experiment=N-terminus verified by Edman degradation: PMID 7612632;note=16S pseudouridylate 516 synthase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009451 - RNA modification;codon_start=1;transl_table=11;product=16S rRNA pseudouridine(516) synthase;protein_id=AAC75244.1;db_xref=GI:1788510;db_xref=ASAP:ABE-0007223;db_xref=UniProtKB/Swiss-Prot:P0AA43;db_xref=EcoGene:EG12044 EMBL gene 2280632 2282392 . + . ID=.4773;gene=yejH;locus_tag=b2184;gene_synonym=ECK2178;gene_synonym=JW2172;gene_synonym=yejI;gene_synonym=yejJ;db_xref=EcoGene:EG12045 EMBL CDS 2280632 2282392 . + 0 ID=.4774;gene=yejH;locus_tag=b2184;gene_synonym=ECK2178;gene_synonym=JW2172;gene_synonym=yejI;gene_synonym=yejJ;function=putative enzyme%3B Not classified;note=putative ATP-dependent helicase;codon_start=1;transl_table=11;product=putative ATP-dependent DNA or RNA helicase;protein_id=AAC75245.1;db_xref=GI:1788511;db_xref=ASAP:ABE-0007228;db_xref=UniProtKB/Swiss-Prot:P33919;db_xref=EcoGene:EG12045 EMBL gene 2282517 2282801 . + . ID=.4775;gene=rplY;locus_tag=b2185;gene_synonym=ECK2179;gene_synonym=JW2173;db_xref=EcoGene:EG10885 EMBL CDS 2282517 2282801 . + 0 ID=.4776;gene=rplY;locus_tag=b2185;gene_synonym=ECK2179;gene_synonym=JW2173;function=structural component%3B Ribosomal proteins - synthesis%2C modification;experiment=N-terminus verified by Edman degradation: PMID 1093874%2C1100506%2C9298646%2C9868784;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0003735 - structural constituent of ribosome%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=50S ribosomal subunit protein L25;protein_id=AAC75246.1;db_xref=GI:1788512;db_xref=ASAP:ABE-0007231;db_xref=UniProtKB/Swiss-Prot:P68919;db_xref=EcoGene:EG10885 EMBL repeat_region 2282887 2282920 . + . ID=.4777;note=REP159 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 2282940 2283947 . - . ID=.4778;gene=yejK;locus_tag=b2186;gene_synonym=ECK2180;gene_synonym=JW2174;gene_synonym=ndpA;db_xref=EcoGene:EG12048 EMBL CDS 2282940 2283947 . - 0 ID=.4779;gene=yejK;locus_tag=b2186;gene_synonym=ECK2180;gene_synonym=JW2174;gene_synonym=ndpA;note=protein present in spermidine nucleoids%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=spermidine nucleoid-associated protein;protein_id=AAC75247.1;db_xref=GI:1788513;db_xref=ASAP:ABE-0007234;db_xref=UniProtKB/Swiss-Prot:P33920;db_xref=EcoGene:EG12048 EMBL gene 2284129 2284356 . + . ID=.4780;gene=yejL;locus_tag=b2187;gene_synonym=ECK2181;gene_synonym=JW2175;db_xref=EcoGene:EG12043 EMBL CDS 2284129 2284356 . + 0 ID=.4781;gene=yejL;locus_tag=b2187;gene_synonym=ECK2181;gene_synonym=JW2175;codon_start=1;transl_table=11;product=UPF0352 family protein;protein_id=AAC75248.1;db_xref=GI:1788514;db_xref=ASAP:ABE-0007238;db_xref=UniProtKB/Swiss-Prot:P0AD24;db_xref=EcoGene:EG12043 EMBL gene 2284376 2286136 . + . ID=.4782;gene=yejM;locus_tag=b2188;gene_synonym=ECK2182;gene_synonym=JW2176;gene_synonym=yejN;db_xref=EcoGene:EG12049 EMBL CDS 2284376 2286136 . + 0 ID=.4783;gene=yejM;locus_tag=b2188;gene_synonym=ECK2182;gene_synonym=JW2176;gene_synonym=yejN;function=putative enzyme%3B Not classified;note=putative sulfatase;codon_start=1;transl_table=11;product=essential inner membrane DUF3413 domain-containing protein%3B lipid A production and membrane permeability factor;protein_id=AAC75249.1;db_xref=GI:1788515;db_xref=ASAP:ABE-0007240;db_xref=UniProtKB/Swiss-Prot:P0AD27;db_xref=EcoGene:EG12049 EMBL gene 2286211 2286287 . + . ID=.4784;gene=proL;locus_tag=b2189;gene_synonym=ECK2183;gene_synonym=JWR0042;gene_synonym=proW;db_xref=EcoGene:EG30067 EMBL tRNA 2286211 2286287 . + . ID=.4785;gene=proL;locus_tag=b2189;gene_synonym=ECK2183;gene_synonym=JWR0042;gene_synonym=proW;product=tRNA-Pro;note=anticodon: GGG;db_xref=ASAP:ABE-0007242;db_xref=EcoGene:EG30067 EMBL biological_region 2286390 2290180 . - . ID=.4786;featflags=type:gene;gene=yejO;locus_tag=b2190;gene_synonym=ECK2184;gene_synonym=JW5839;pseudo=true;db_xref=EcoGene:EG12051 EMBL gene 2286390 2288914 . - . Parent=.4786 EMBL gene 2290114 2290180 . - . Parent=.4786 EMBL biological_region 2286390 2290180 . - 0 ID=.4789;featflags=type:CDS;gene=yejO;locus_tag=b2190;gene_synonym=ECK2184;gene_synonym=JW5839;note=pseudogene%2C autotransporter outer membrane homology%3Bputative transport%3B Not classified%3B putative ATP-binding component of a transport system%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0007244;db_xref=UniProtKB/Swiss-Prot:P33924;db_xref=EcoGene:EG12051 EMBL CDS 2286390 2288914 . - 0 Parent=.4789 EMBL CDS 2290114 2290180 . - 0 Parent=.4789 EMBL sequence_feature 2288919 2290113 . - . ID=.4792;note=*mobile_element_type: insertion sequence:IS5K EMBL gene 2289065 2290081 . - . ID=.4793;gene=insH1;locus_tag=b2192;gene_synonym=ECK0261;db_xref=EcoGene:EG40008 EMBL CDS 2289065 2290081 . - 0 ID=.4794;gene=insH1;locus_tag=b2192;gene_synonym=ECK0261;function=IS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;codon_start=1;transl_table=11;product=IS5 transposase and trans-activator;protein_id=AAC75252.1;db_xref=GI:1788518;db_xref=ASAP:ABE-0007252;db_xref=UniProtKB/Swiss-Prot:P0CE55;db_xref=EcoGene:EG40008 EMBL gene 2290500 2291147 . + . ID=.4795;gene=narP;locus_tag=b2193;gene_synonym=ECK2185;gene_synonym=JW2181;db_xref=EcoGene:EG11527 EMBL CDS 2290500 2291147 . + 0 ID=.4796;gene=narP;locus_tag=b2193;gene_synonym=ECK2185;gene_synonym=JW2181;function=regulator%3B Energy metabolism%2C carbon: Anaerobic respiration;note=nitrate/nitrite response regulator (sensor NarQ)%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=response regulator in two-component regulatory system with NarQ;protein_id=AAC75253.1;db_xref=GI:1788521;db_xref=ASAP:ABE-0007259;db_xref=UniProtKB/Swiss-Prot:P31802;db_xref=EcoGene:EG11527 EMBL repeat_region 2291153 2291351 . + . ID=.4797;note=RIP160 (repetitive extragenic palindromic) element%3B contains 4 REP sequences and 1 IHF site EMBL gene 2291358 2292410 . - . ID=.4798;gene=ccmH;locus_tag=b2194;gene_synonym=ECK2186;gene_synonym=JW2182;gene_synonym=yejP;db_xref=EcoGene:EG12052 EMBL CDS 2291358 2292410 . - 0 ID=.4799;gene=ccmH;locus_tag=b2194;gene_synonym=ECK2186;gene_synonym=JW2182;gene_synonym=yejP;function=putative enzyme%3B Energy metabolism%2C carbon: Electron transport;note=possible subunit of heme lyase%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0017004 - cytochrome complex assembly%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=heme lyase%2C CcmH subunit;protein_id=AAC75254.1;db_xref=GI:1788522;db_xref=ASAP:ABE-0007262;db_xref=UniProtKB/Swiss-Prot:P0ABM9;db_xref=EcoGene:EG12052 EMBL gene 2292407 2292964 . - . ID=.4800;gene=dsbE;locus_tag=b2195;gene_synonym=ccmG;gene_synonym=ECK2187;gene_synonym=JW2183;gene_synonym=yejQ;db_xref=EcoGene:EG12053 EMBL CDS 2292407 2292964 . - 0 ID=.4801;gene=dsbE;locus_tag=b2195;gene_synonym=ccmG;gene_synonym=ECK2187;gene_synonym=JW2183;gene_synonym=yejQ;function=enzyme%3B Energy metabolism%2C carbon: Electron transport;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0017004 - cytochrome complex assembly%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=periplasmic thioredoxin of cytochrome c-type biogenesis;protein_id=AAC75255.1;db_xref=GI:1788523;db_xref=ASAP:ABE-0007264;db_xref=UniProtKB/Swiss-Prot:P0AA86;db_xref=EcoGene:EG12053 EMBL gene 2292961 2294904 . - . ID=.4802;gene=ccmF;locus_tag=b2196;gene_synonym=ECK2188;gene_synonym=JW2184;gene_synonym=yejR;db_xref=EcoGene:EG12054 EMBL CDS 2292961 2294904 . - 0 ID=.4803;gene=ccmF;locus_tag=b2196;gene_synonym=ECK2188;gene_synonym=JW2184;gene_synonym=yejR;function=putative enzyme%3B Energy metabolism%2C carbon: Electron transport;note=cytochrome c-type biogenesis protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0017004 - cytochrome complex assembly;codon_start=1;transl_table=11;product=heme lyase%2C CcmF subunit;protein_id=AAC75256.1;db_xref=GI:1788524;db_xref=ASAP:ABE-0007269;db_xref=UniProtKB/Swiss-Prot:P33927;db_xref=EcoGene:EG12054 EMBL gene 2294901 2295380 . - . ID=.4804;gene=ccmE;locus_tag=b2197;gene_synonym=ECK2189;gene_synonym=JW2185;gene_synonym=yejS;db_xref=EcoGene:EG12055 EMBL CDS 2294901 2295380 . - 0 ID=.4805;gene=ccmE;locus_tag=b2197;gene_synonym=ECK2189;gene_synonym=JW2185;gene_synonym=yejS;function=putative enzyme%3B Energy metabolism%2C carbon: Electron transport;experiment=N-terminus verified by Edman degradation: PMID 9770295;note=cytochrome c biogenesis%2C possible subunit of a heme lyase%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0017004 - cytochrome complex assembly%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=periplasmic heme chaperone;protein_id=AAC75257.1;db_xref=GI:1788525;db_xref=ASAP:ABE-0007271;db_xref=UniProtKB/Swiss-Prot:P69490;db_xref=EcoGene:EG12055 EMBL gene 2295377 2295586 . - . ID=.4806;gene=ccmD;locus_tag=b2198;gene_synonym=ECK2190;gene_synonym=JW2186;gene_synonym=yojM;db_xref=EcoGene:EG12169 EMBL CDS 2295377 2295586 . - 0 ID=.4807;gene=ccmD;locus_tag=b2198;gene_synonym=ECK2190;gene_synonym=JW2186;gene_synonym=yojM;function=transport%3B Protein%2C peptide secretion;note=heme exporter protein C%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0017004 - cytochrome complex assembly%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=cytochrome c biogenesis protein%3B heme export ABC transporter holo-CcmE release factor;protein_id=AAC75258.1;db_xref=GI:1788526;db_xref=ASAP:ABE-0007273;db_xref=UniProtKB/Swiss-Prot:P0ABM5;db_xref=EcoGene:EG12169 EMBL gene 2295583 2296320 . - . ID=.4808;gene=ccmC;locus_tag=b2199;gene_synonym=ECK2191;gene_synonym=JW2187;gene_synonym=yejT;gene_synonym=yejU;db_xref=EcoGene:EG12057 EMBL CDS 2295583 2296320 . - 0 ID=.4809;gene=ccmC;locus_tag=b2199;gene_synonym=ECK2191;gene_synonym=JW2187;gene_synonym=yejT;gene_synonym=yejU;function=transport%3B Protein%2C peptide secretion;note=heme exporter protein C%3B membrane component of ABC superfamily%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0017004 - cytochrome complex assembly%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=heme export ABC transporter permease%3B CcmE-interacting protein;protein_id=AAC75259.1;db_xref=GI:1788527;db_xref=ASAP:ABE-0007275;db_xref=UniProtKB/Swiss-Prot:P0ABM1;db_xref=EcoGene:EG12057 EMBL gene 2296362 2297024 . - . ID=.4810;gene=ccmB;locus_tag=b2200;gene_synonym=ECK2192;gene_synonym=JW2188;gene_synonym=yejV;db_xref=EcoGene:EG12058 EMBL CDS 2296362 2297024 . - 0 ID=.4811;gene=ccmB;locus_tag=b2200;gene_synonym=ECK2192;gene_synonym=JW2188;gene_synonym=yejV;function=transport%3B Protein%2C peptide secretion;note=heme exporter protein B%2C cytochrome c-type biogenesis protein%3B membrane component of ABC superfamily%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0017004 - cytochrome complex assembly%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=heme export ABC transporter permease;protein_id=AAC75260.1;db_xref=GI:1788528;db_xref=ASAP:ABE-0007277;db_xref=UniProtKB/Swiss-Prot:P0ABL8;db_xref=EcoGene:EG12058 EMBL gene 2297021 2297644 . - . ID=.4812;gene=ccmA;locus_tag=b2201;gene_synonym=ECK2193;gene_synonym=JW5366;gene_synonym=yejW;db_xref=EcoGene:EG12059 EMBL CDS 2297021 2297644 . - 0 ID=.4813;gene=ccmA;locus_tag=b2201;gene_synonym=ECK2193;gene_synonym=JW5366;gene_synonym=yejW;function=transport%3B Protein%2C peptide secretion;note=ATP binding protein of heme exporter A%3B ATP-binding component of ABC superfamily%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0017004 - cytochrome complex assembly%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=heme export ABC transporter ATPase;protein_id=AAC75261.2;db_xref=GI:87082064;db_xref=ASAP:ABE-0007279;db_xref=UniProtKB/Swiss-Prot:P33931;db_xref=EcoGene:EG12059 EMBL gene 2297657 2298259 . - . ID=.4814;gene=napC;locus_tag=b2202;gene_synonym=ECK2194;gene_synonym=JW2190;gene_synonym=yejX;db_xref=EcoGene:EG12060 EMBL CDS 2297657 2298259 . - 0 ID=.4815;gene=napC;locus_tag=b2202;gene_synonym=ECK2194;gene_synonym=JW2190;gene_synonym=yejX;function=putative enzyme%3B Energy metabolism%2C carbon: Electron transport;note=cytochrome c-type protein%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0017004 - cytochrome complex assembly;codon_start=1;transl_table=11;product=quinol dehydrogenase%2C electron source for NapAB;protein_id=AAC75262.1;db_xref=GI:1788530;db_xref=ASAP:ABE-0007281;db_xref=UniProtKB/Swiss-Prot:P0ABL5;db_xref=EcoGene:EG12060 EMBL gene 2298269 2298718 . - . ID=.4816;gene=napB;locus_tag=b2203;gene_synonym=ECK2195;gene_synonym=JW5367;gene_synonym=yejY;db_xref=EcoGene:EG12061 EMBL CDS 2298269 2298718 . - 0 ID=.4817;gene=napB;locus_tag=b2203;gene_synonym=ECK2195;gene_synonym=JW5367;gene_synonym=yejY;function=carrier%3B Energy metabolism%2C carbon: Electron transport;note=cytochrome c-type protein%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0017004 - cytochrome complex assembly;codon_start=1;transl_table=11;product=nitrate reductase%2C small%2C cytochrome C550 subunit%2C periplasmic;protein_id=AAC75263.2;db_xref=GI:87082065;db_xref=ASAP:ABE-0007283;db_xref=UniProtKB/Swiss-Prot:P0ABL3;db_xref=EcoGene:EG12061 EMBL gene 2298715 2299578 . - . ID=.4818;gene=napH;locus_tag=b2204;gene_synonym=ECK2196;gene_synonym=JW2192;gene_synonym=yejZ;db_xref=EcoGene:EG12062 EMBL CDS 2298715 2299578 . - 0 ID=.4819;gene=napH;locus_tag=b2204;gene_synonym=ECK2196;gene_synonym=JW2192;gene_synonym=yejZ;function=carrier%3B Energy metabolism%2C carbon: Electron transport;note=ferredoxin-type protein: electron transfer%3B GO_function: GO:0009055 - electron carrier activity%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=ferredoxin-type protein;protein_id=AAC75264.1;db_xref=GI:1788532;db_xref=ASAP:ABE-0007285;db_xref=UniProtKB/Swiss-Prot:P33934;db_xref=EcoGene:EG12062 EMBL gene 2299565 2300260 . - . ID=.4820;gene=napG;locus_tag=b2205;gene_synonym=ECK2197;gene_synonym=JW2193;gene_synonym=yojA;gene_synonym=yojB;db_xref=EcoGene:EG12064 EMBL CDS 2299565 2300260 . - 0 ID=.4821;gene=napG;locus_tag=b2205;gene_synonym=ECK2197;gene_synonym=JW2193;gene_synonym=yojA;gene_synonym=yojB;function=carrier%3B Energy metabolism%2C carbon: Electron transport;note=ferredoxin-type protein: electron transfer%3B GO_function: GO:0009055 - electron carrier activity%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=ferredoxin-type protein;protein_id=AAC75265.1;db_xref=GI:1788533;db_xref=ASAP:ABE-0007287;db_xref=UniProtKB/Swiss-Prot:P0AAL3;db_xref=EcoGene:EG12064 EMBL gene 2300267 2302753 . - . ID=.4822;gene=napA;locus_tag=b2206;gene_synonym=ECK2198;gene_synonym=JW2194;gene_synonym=yojC;gene_synonym=yojD;gene_synonym=yojE;db_xref=EcoGene:EG12067 EMBL CDS 2300267 2302753 . - 0 ID=.4823;gene=napA;locus_tag=b2206;gene_synonym=ECK2198;gene_synonym=JW2194;gene_synonym=yojC;gene_synonym=yojD;gene_synonym=yojE;ec_number=1.7.99.4;function=putative enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;note=probable nitrate reductase 3%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=nitrate reductase%2C periplasmic%2C large subunit;protein_id=AAC75266.1;db_xref=GI:1788534;db_xref=ASAP:ABE-0007289;db_xref=UniProtKB/Swiss-Prot:P33937;db_xref=EcoGene:EG12067 EMBL gene 2302750 2303013 . - . ID=.4824;gene=napD;locus_tag=b2207;gene_synonym=ECK2199;gene_synonym=JW2195;gene_synonym=yojF;db_xref=EcoGene:EG12143 EMBL CDS 2302750 2303013 . - 0 ID=.4825;gene=napD;locus_tag=b2207;gene_synonym=ECK2199;gene_synonym=JW2195;gene_synonym=yojF;note=GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=assembly protein for periplasmic nitrate reductase;protein_id=AAC75267.1;db_xref=GI:1788535;db_xref=ASAP:ABE-0007291;db_xref=UniProtKB/Swiss-Prot:P0A9I5;db_xref=EcoGene:EG12143 EMBL gene 2303003 2303497 . - . ID=.4826;gene=napF;locus_tag=b2208;gene_synonym=ECK2200;gene_synonym=JW2196;gene_synonym=yojG;db_xref=EcoGene:EG12068 EMBL CDS 2303003 2303497 . - 0 ID=.4827;gene=napF;locus_tag=b2208;gene_synonym=ECK2200;gene_synonym=JW2196;gene_synonym=yojG;function=carrier%3B Energy metabolism%2C carbon: Electron transport;note=ferredoxin-type protein: electron transfer%3B GO_function: GO:0009055 - electron carrier activity%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=ferredoxin-type protein%2C role in electron transfer to periplasmic nitrate reductase NapA;protein_id=AAC75268.1;db_xref=GI:1788536;db_xref=ASAP:ABE-0007293;db_xref=UniProtKB/Swiss-Prot:P0AAL0;db_xref=EcoGene:EG12068 EMBL gene 2303905 2304393 . + . ID=.4828;gene=eco;locus_tag=b2209;gene_synonym=ECK2201;gene_synonym=eti;gene_synonym=JW2197;db_xref=EcoGene:EG10255 EMBL CDS 2303905 2304393 . + 0 ID=.4829;gene=eco;locus_tag=b2209;gene_synonym=ECK2201;gene_synonym=eti;gene_synonym=JW2197;function=regulator%3B Degradation of proteins%2C peptides%2C glyco;note=GO_component: GO:0042597 - periplasmic space;codon_start=1;transl_table=11;product=ecotin%2C a serine protease inhibitor;protein_id=AAC75269.1;db_xref=GI:1788538;db_xref=ASAP:ABE-0007297;db_xref=UniProtKB/Swiss-Prot:P23827;db_xref=EcoGene:EG10255 EMBL repeat_region 2304417 2305071 . + . ID=.4830;note=REP161 (repetitive extragenic palindromic) element%3B contains 12 REP sequences EMBL gene 2305108 2306754 . - . ID=.4831;gene=mqo;locus_tag=b2210;gene_synonym=ECK2202;gene_synonym=JW2198;gene_synonym=yojH;db_xref=EcoGene:EG12069 EMBL CDS 2305108 2306754 . - 0 ID=.4832;gene=mqo;locus_tag=b2210;gene_synonym=ECK2202;gene_synonym=JW2198;gene_synonym=yojH;ec_number=1.1.5.4;note=GO_process: GO:0006099 - tricarboxylic acid cycle;codon_start=1;transl_table=11;product=malate dehydrogenase%2C FAD/NAD(P)-binding domain;protein_id=AAC75270.1;db_xref=GI:1788539;db_xref=ASAP:ABE-0007300;db_xref=UniProtKB/Swiss-Prot:P33940;db_xref=EcoGene:EG12069 EMBL gene 2306972 2308615 . - . ID=.4833;gene=yojI;locus_tag=b2211;gene_synonym=ECK2203;gene_synonym=JW2199;gene_synonym=yojJ;db_xref=EcoGene:EG12070 EMBL CDS 2306972 2308615 . - 0 ID=.4834;gene=yojI;locus_tag=b2211;gene_synonym=ECK2203;gene_synonym=JW2199;gene_synonym=yojJ;function=putative transport%3B Not classified;note=putative ATP-binding component of a transport system%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=microcin J25 efflux ABC transporter permease/ATPase;protein_id=AAC75271.1;db_xref=GI:1788540;db_xref=ASAP:ABE-0007303;db_xref=UniProtKB/Swiss-Prot:P33941;db_xref=EcoGene:EG12070 EMBL gene 2308691 2309341 . - . ID=.4835;gene=alkB;locus_tag=b2212;gene_synonym=aidD;gene_synonym=ECK2204;gene_synonym=JW2200;db_xref=EcoGene:EG10037 EMBL CDS 2308691 2309341 . - 0 ID=.4836;gene=alkB;locus_tag=b2212;gene_synonym=aidD;gene_synonym=ECK2204;gene_synonym=JW2200;function=putative enzyme%3B DNA - replication%2C repair%2C restriction/modification;experiment=N-terminus verified by Edman degradation: PMID 3536913;note=DNA repair system specific for alkylated DNA%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006281 - DNA repair;codon_start=1;transl_table=11;product=oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions;protein_id=AAC75272.1;db_xref=GI:1788541;db_xref=ASAP:ABE-0007308;db_xref=UniProtKB/Swiss-Prot:P05050;db_xref=EcoGene:EG10037 EMBL gene 2309341 2310405 . - . ID=.4837;gene=ada;locus_tag=b2213;gene_synonym=ECK2205;gene_synonym=JW2201;db_xref=EcoGene:EG10029 EMBL CDS 2309341 2310405 . - 0 ID=.4838;gene=ada;locus_tag=b2213;gene_synonym=ECK2205;gene_synonym=JW2201;ec_number=2.1.1.63;function=enzyme%3B DNA - replication%2C repair%2C restriction/modification;experiment=N-terminus verified by Edman degradation: PMID 2987251;note=O6-methylguanine-DNA methyltransferase%3B transcription activator/repressor%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006281 - DNA repair%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=fused DNA-binding transcriptional dual regulator/O6-methylguanine-DNA methyltransferase;protein_id=AAC75273.1;db_xref=GI:1788542;db_xref=ASAP:ABE-0007311;db_xref=UniProtKB/Swiss-Prot:P06134;db_xref=EcoGene:EG10029 EMBL gene 2310479 2311534 . - . ID=.4839;gene=apbE;locus_tag=b2214;gene_synonym=ECK2206;gene_synonym=JW5368;gene_synonym=yojK;gene_synonym=yojL;db_xref=EcoGene:EG12073 EMBL CDS 2310479 2311534 . - 0 ID=.4840;gene=apbE;locus_tag=b2214;gene_synonym=ECK2206;gene_synonym=JW5368;gene_synonym=yojK;gene_synonym=yojL;note=GO_process: GO:0009228 - thiamin biosynthetic process;codon_start=1;transl_table=11;product=putative thiamine-synthetic flavin transferase lipoprotein;protein_id=AAC75274.1;db_xref=GI:1788543;db_xref=ASAP:ABE-0007317;db_xref=UniProtKB/Swiss-Prot:P0AB85;db_xref=EcoGene:EG12073 EMBL gene 2311646 2312749 . - . ID=.4841;gene=ompC;locus_tag=b2215;gene_synonym=butR;gene_synonym=ECK2207;gene_synonym=JW2203;gene_synonym=meoA;gene_synonym=par;db_xref=EcoGene:EG10670 EMBL CDS 2311646 2312749 . - 0 ID=.4842;gene=ompC;locus_tag=b2215;gene_synonym=butR;gene_synonym=ECK2207;gene_synonym=JW2203;gene_synonym=meoA;gene_synonym=par;function=membrane%3B Outer membrane constituents;note=outer membrane protein 1b (Ib%3Bc)%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane;codon_start=1;transl_table=11;product=outer membrane porin protein C;protein_id=AAC75275.1;db_xref=GI:1788544;db_xref=ASAP:ABE-0007321;db_xref=UniProtKB/Swiss-Prot:P06996;db_xref=EcoGene:EG10670 EMBL gene 2313084 2313176 . + . ID=.4843;gene=micF;locus_tag=b4439;gene_synonym=ECK2208;gene_synonym=IS113;gene_synonym=JWR0043;gene_synonym=stc;db_xref=EcoGene:EG30063 EMBL ncRNA 2313084 2313176 . + . ID=.4844;ncrna_class=antisense_RNA;gene=micF;locus_tag=b4439;gene_synonym=ECK2208;gene_synonym=IS113;gene_synonym=JWR0043;gene_synonym=stc;product=sRNA antisense regulator affecting ompF expression%2C Hfq-dependent;note=regulatory antisense RNA affecting ompF expression%3B member of soxRS regulon;db_xref=ASAP:ABE-0047259;db_xref=EcoGene:EG30063 EMBL gene 2313488 2316160 . + . ID=.4845;gene=rcsD;locus_tag=b2216;gene_synonym=ECK2209;gene_synonym=JW2204;gene_synonym=yojN;gene_synonym=yojP;gene_synonym=yojQ;db_xref=EcoGene:EG12385 EMBL CDS 2313488 2316160 . + 0 ID=.4846;gene=rcsD;locus_tag=b2216;gene_synonym=ECK2209;gene_synonym=JW2204;gene_synonym=yojN;gene_synonym=yojP;gene_synonym=yojQ;function=putative regulator%3B Not classified;note=putative 2-component sensor protein%3B GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=phosphotransfer intermediate protein in two-component regulatory system with RcsBC;protein_id=AAC75276.1;db_xref=GI:1788545;db_xref=ASAP:ABE-0007330;db_xref=UniProtKB/Swiss-Prot:P39838;db_xref=EcoGene:EG12385 EMBL gene 2316177 2316827 . + . ID=.4847;gene=rcsB;locus_tag=b2217;gene_synonym=ECK2210;gene_synonym=JW2205;gene_synonym=viaA;db_xref=EcoGene:EG10821 EMBL CDS 2316177 2316827 . + 0 ID=.4848;gene=rcsB;locus_tag=b2217;gene_synonym=ECK2210;gene_synonym=JW2205;gene_synonym=viaA;function=regulator%3B Surface polysaccharides %26 antigens;note=positive response regulator for colanic capsule biosynthesis%2C (sensor%2C RcsC)%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0009242 - colanic acid biosynthetic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=response regulator in two-component regulatory system with RcsC and YojN;protein_id=AAC75277.1;db_xref=GI:1788546;db_xref=ASAP:ABE-0007333;db_xref=UniProtKB/Swiss-Prot:P69407;db_xref=EcoGene:EG10821 EMBL repeat_region 2316834 2317030 . + . ID=.4849;note=RIP162 (repetitive extragenic palindromic) element%3B contains 5 REP sequences and 1 IHF site EMBL gene 2317027 2319876 . - . ID=.4850;gene=rcsC;locus_tag=b2218;gene_synonym=ECK2211;gene_synonym=JW5917;gene_synonym=JW5920;db_xref=EcoGene:EG10822 EMBL CDS 2317027 2319876 . - 0 ID=.4851;gene=rcsC;locus_tag=b2218;gene_synonym=ECK2211;gene_synonym=JW5917;gene_synonym=JW5920;function=enzyme%3B Surface polysaccharides %26 antigens;note=sensor for ctr capsule biosynthesis%2C probable histidine kinase acting on RcsB%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0009242 - colanic acid biosynthetic process%3B GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=hybrid sensory kinase in two-component regulatory system with RcsB and YojN;protein_id=AAC75278.2;db_xref=GI:145693157;db_xref=ASAP:ABE-0007336;db_xref=UniProtKB/Swiss-Prot:P14376;db_xref=EcoGene:EG10822 EMBL gene 2320043 2321869 . + . ID=.4852;gene=atoS;locus_tag=b2219;gene_synonym=ECK2212;gene_synonym=JW2213;db_xref=EcoGene:EG11667 EMBL CDS 2320043 2321869 . + 0 ID=.4853;gene=atoS;locus_tag=b2219;gene_synonym=ECK2212;gene_synonym=JW2213;function=regulator%3B Not classified;note=sensor protein AtoS for response regulator AtoC%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0019395 - fatty acid oxidation%3B GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=sensory histidine kinase in two-component regulatory system with AtoC;protein_id=AAC75279.1;db_xref=GI:1788549;db_xref=ASAP:ABE-0007341;db_xref=UniProtKB/Swiss-Prot:Q06067;db_xref=EcoGene:EG11667 EMBL gene 2321866 2323251 . + . ID=.4854;gene=atoC;locus_tag=b2220;gene_synonym=Az;gene_synonym=ECK2213;gene_synonym=JW2214;db_xref=EcoGene:EG11668 EMBL CDS 2321866 2323251 . + 0 ID=.4855;gene=atoC;locus_tag=b2220;gene_synonym=Az;gene_synonym=ECK2213;gene_synonym=JW2214;function=regulator%3B Degradation of small molecules: Fatty acids;note=response regulator of ato%2C ornithine decarboxylase antizyme (sensor ATOS)%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0019395 - fatty acid oxidation%3B GO_process: GO:0006596 - polyamine biosynthetic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=fused response regulator of ato operon%2C in two-component system with AtoS: response regulator/sigma54 interaction protein;protein_id=AAC75280.1;db_xref=GI:1788550;db_xref=ASAP:ABE-0007343;db_xref=UniProtKB/Swiss-Prot:Q06065;db_xref=EcoGene:EG11668 EMBL gene 2323447 2324109 . + . ID=.4856;gene=atoD;locus_tag=b2221;gene_synonym=ECK2214;gene_synonym=JW2215;db_xref=EcoGene:EG11669 EMBL CDS 2323447 2324109 . + 0 ID=.4857;gene=atoD;locus_tag=b2221;gene_synonym=ECK2214;gene_synonym=JW2215;ec_number=2.8.3.8;function=enzyme%3B Degradation of small molecules: Fatty acids;note=acetyl-CoA:acetoacetyl-CoA transferase alpha subunit%3B GO_process: GO:0019395 - fatty acid oxidation;codon_start=1;transl_table=11;product=acetyl-CoA:acetoacetyl-CoA transferase%2C alpha subunit;protein_id=AAC75281.1;db_xref=GI:1788551;db_xref=ASAP:ABE-0007347;db_xref=UniProtKB/Swiss-Prot:P76458;db_xref=EcoGene:EG11669 EMBL gene 2324109 2324759 . + . ID=.4858;gene=atoA;locus_tag=b2222;gene_synonym=ECK2215;gene_synonym=JW2216;db_xref=EcoGene:EG11670 EMBL CDS 2324109 2324759 . + 0 ID=.4859;gene=atoA;locus_tag=b2222;gene_synonym=ECK2215;gene_synonym=JW2216;ec_number=2.8.3.8;function=enzyme%3B Degradation of small molecules: Fatty acids;note=acetyl-CoA:acetoacetyl-CoA transferase beta subunit%3B GO_process: GO:0019395 - fatty acid oxidation;codon_start=1;transl_table=11;product=acetyl-CoA:acetoacetyl-CoA transferase%2C beta subunit;protein_id=AAC75282.1;db_xref=GI:1788552;db_xref=ASAP:ABE-0007349;db_xref=UniProtKB/Swiss-Prot:P76459;db_xref=EcoGene:EG11670 EMBL gene 2324756 2326078 . + . ID=.4860;gene=atoE;locus_tag=b2223;gene_synonym=ECK2216;gene_synonym=JW2217;db_xref=EcoGene:EG11671 EMBL CDS 2324756 2326078 . + 0 ID=.4861;gene=atoE;locus_tag=b2223;gene_synonym=ECK2216;gene_synonym=JW2217;function=transport%3B Degradation of small molecules: Fatty acids;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0019395 - fatty acid oxidation;codon_start=1;transl_table=11;product=short chain fatty acid transporter;protein_id=AAC75283.1;db_xref=GI:1788553;db_xref=ASAP:ABE-0007353;db_xref=UniProtKB/Swiss-Prot:P76460;db_xref=EcoGene:EG11671 EMBL gene 2326109 2327293 . + . ID=.4862;gene=atoB;locus_tag=b2224;gene_synonym=ECK2217;gene_synonym=JW2218;db_xref=EcoGene:EG11672 EMBL CDS 2326109 2327293 . + 0 ID=.4863;gene=atoB;locus_tag=b2224;gene_synonym=ECK2217;gene_synonym=JW2218;ec_number=2.3.1.9;function=enzyme%3B Degradation of small molecules: Fatty acids;note=GO_process: GO:0019395 - fatty acid oxidation;codon_start=1;transl_table=11;product=acetyl-CoA acetyltransferase;protein_id=AAC75284.1;db_xref=GI:1788554;db_xref=ASAP:ABE-0007355;db_xref=UniProtKB/Swiss-Prot:P76461;db_xref=EcoGene:EG11672 EMBL gene 2327367 2328143 . - . ID=.4864;gene=yfaP;locus_tag=b2225;gene_synonym=ECK2218;gene_synonym=JW2219;db_xref=EcoGene:EG14078 EMBL CDS 2327367 2328143 . - 0 ID=.4865;gene=yfaP;locus_tag=b2225;gene_synonym=ECK2218;gene_synonym=JW2219;codon_start=1;transl_table=11;product=DUF2135 family protein%2C putative host defense protein;protein_id=AAC75285.1;db_xref=GI:1788556;db_xref=ASAP:ABE-0007357;db_xref=UniProtKB/Swiss-Prot:P76462;db_xref=EcoGene:EG14078 EMBL gene 2328148 2329797 . - . ID=.4866;gene=yfaQ;locus_tag=b2226;gene_synonym=ECK2219;gene_synonym=JW2220;db_xref=EcoGene:EG14079 EMBL CDS 2328148 2329797 . - 0 ID=.4867;gene=yfaQ;locus_tag=b2226;gene_synonym=ECK2219;gene_synonym=JW2220;codon_start=1;transl_table=11;product=tandem DUF2300 domain protein%2C putative host defense protein;protein_id=AAC75286.1;db_xref=GI:1788557;db_xref=ASAP:ABE-0007359;db_xref=UniProtKB/Swiss-Prot:P76463;db_xref=EcoGene:EG14079 EMBL gene 2329798 2334402 . - . ID=.4868;gene=yfaS;locus_tag=b4500;gene_synonym=ECK2220;gene_synonym=JW2221;gene_synonym=JW2222;gene_synonym=yfaR;pseudo=true;db_xref=EcoGene:EG14081 EMBL CDS 2329798 2334402 . - 0 ID=.4869;gene=yfaS;locus_tag=b4500;gene_synonym=ECK2220;gene_synonym=JW2221;gene_synonym=JW2222;gene_synonym=yfaR;note=pseudogene%2C bacterial alpha2-macroglobulin YfaS variant family%3B putative membrane protein;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0007362;db_xref=ASAP:ABE-0007364;db_xref=ASAP:ABE-0285101;db_xref=UniProtKB/Swiss-Prot:P76464;db_xref=EcoGene:EG14081 EMBL gene 2334336 2334959 . - . ID=.4870;gene=yfaT;locus_tag=b2229;gene_synonym=ECK2221;gene_synonym=JW2223;db_xref=EcoGene:EG14082 EMBL CDS 2334336 2334959 . - 0 ID=.4871;gene=yfaT;locus_tag=b2229;gene_synonym=ECK2221;gene_synonym=JW2223;codon_start=1;transl_table=11;product=DUF1175 family protein%2C putative host defense protein;protein_id=AAC75289.2;db_xref=GI:87082068;db_xref=ASAP:ABE-0007366;db_xref=UniProtKB/Swiss-Prot:P76466;db_xref=EcoGene:EG14082 EMBL gene 2334956 2336644 . - . ID=.4872;gene=yfaA;locus_tag=b2230;gene_synonym=ECK2222;gene_synonym=JW2224;gene_synonym=pufY;db_xref=EcoGene:EG11142 EMBL CDS 2334956 2336644 . - 0 ID=.4873;gene=yfaA;locus_tag=b2230;gene_synonym=ECK2222;gene_synonym=JW2224;gene_synonym=pufY;codon_start=1;transl_table=11;product=DUF2138 family protein%2C putative host defense protein;protein_id=AAC75290.2;db_xref=GI:87082069;db_xref=ASAP:ABE-0007368;db_xref=UniProtKB/Swiss-Prot:P17994;db_xref=EcoGene:EG11142 EMBL gene 2336793 2339420 . - . ID=.4874;gene=gyrA;locus_tag=b2231;gene_synonym=ECK2223;gene_synonym=hisW;gene_synonym=JW2225;gene_synonym=nalA;gene_synonym=nfxA;gene_synonym=norA;gene_synonym=parD;db_xref=EcoGene:EG10423 EMBL CDS 2336793 2339420 . - 0 ID=.4875;gene=gyrA;locus_tag=b2231;gene_synonym=ECK2223;gene_synonym=hisW;gene_synonym=JW2225;gene_synonym=nalA;gene_synonym=nfxA;gene_synonym=norA;gene_synonym=parD;ec_number=5.99.1.3;function=enzyme%3B DNA - replication%2C repair%2C restriction/modification;note=DNA gyrase%2C subunit A%2C type II topoisomerase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006261 - DNA-dependent DNA replication%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=DNA gyrase (type II topoisomerase)%2C subunit A;protein_id=AAC75291.1;db_xref=GI:1788562;db_xref=ASAP:ABE-0007370;db_xref=UniProtKB/Swiss-Prot:P0AES4;db_xref=EcoGene:EG10423 EMBL gene 2339567 2340289 . + . ID=.4876;gene=ubiG;locus_tag=b2232;gene_synonym=ECK2224;gene_synonym=JW2226;gene_synonym=pufX;gene_synonym=yfaB;db_xref=EcoGene:EG11143 EMBL CDS 2339567 2340289 . + 0 ID=.4877;gene=ubiG;locus_tag=b2232;gene_synonym=ECK2224;gene_synonym=JW2226;gene_synonym=pufX;gene_synonym=yfaB;ec_number=2.1.1.64;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Menaquinone%2C ubiquinone;note=3-demethylubiquinone-9 3-methyltransferase and 2-octaprenyl-6-hydroxy phenol methylase%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009060 - aerobic respiration;codon_start=1;transl_table=11;product=bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase;protein_id=AAC75292.1;db_xref=GI:1788564;db_xref=ASAP:ABE-0007374;db_xref=UniProtKB/Swiss-Prot:P17993;db_xref=EcoGene:EG11143 EMBL repeat_region 2340313 2340394 . + . ID=.4878;note=REP163 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 2340417 2344169 . - . ID=.4879;gene=yfaL;locus_tag=b2233;gene_synonym=ECK2225;gene_synonym=JW2227;gene_synonym=yfaF;gene_synonym=yfaJ;gene_synonym=yfaK;db_xref=EcoGene:EG12850 EMBL CDS 2340417 2344169 . - 0 ID=.4880;gene=yfaL;locus_tag=b2233;gene_synonym=ECK2225;gene_synonym=JW2227;gene_synonym=yfaF;gene_synonym=yfaJ;gene_synonym=yfaK;function=putative transport%3B Not classified;note=putative ATP-binding component of a transport system;codon_start=1;transl_table=11;product=adhesin;protein_id=AAC75293.1;db_xref=GI:1788565;db_xref=ASAP:ABE-0007377;db_xref=UniProtKB/Swiss-Prot:P45508;db_xref=EcoGene:EG12850 EMBL gene 2344865 2347150 . + . ID=.4881;gene=nrdA;locus_tag=b2234;gene_synonym=dnaF;gene_synonym=ECK2226;gene_synonym=JW2228;db_xref=EcoGene:EG10660 EMBL CDS 2344865 2347150 . + 0 ID=.4882;gene=nrdA;locus_tag=b2234;gene_synonym=dnaF;gene_synonym=ECK2226;gene_synonym=JW2228;ec_number=1.17.4.1;function=enzyme%3B 2'-Deoxyribonucleotide metabolism;experiment=N-terminus verified by Edman degradation: PMID 3894026;note=ribonucleoside diphosphate reductase 1%2C alpha subunit%2C B1%3B GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion;codon_start=1;transl_table=11;product=ribonucleoside-diphosphate reductase 1%2C alpha subunit;protein_id=AAC75294.1;db_xref=GI:2367133;db_xref=ASAP:ABE-0007383;db_xref=UniProtKB/Swiss-Prot:P00452;db_xref=EcoGene:EG10660 EMBL repeat_region 2347160 2347362 . + . ID=.4883;note=REP164 (repetitive extragenic palindromic) element%3B contains 5 REP sequences EMBL gene 2347384 2348514 . + . ID=.4884;gene=nrdB;locus_tag=b2235;gene_synonym=ECK2227;gene_synonym=ftsB;gene_synonym=JW2229;db_xref=EcoGene:EG10661 EMBL CDS 2347384 2348514 . + 0 ID=.4885;gene=nrdB;locus_tag=b2235;gene_synonym=ECK2227;gene_synonym=ftsB;gene_synonym=JW2229;ec_number=1.17.4.1;function=enzyme%3B 2'-Deoxyribonucleotide metabolism;note=ribonucleoside-diphosphate reductase 1%2C beta subunit%2C B2%3B GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion;codon_start=1;transl_table=11;product=ribonucleoside-diphosphate reductase 1%2C beta subunit%2C ferritin-like protein;protein_id=AAC75295.1;db_xref=GI:1788567;db_xref=ASAP:ABE-0007386;db_xref=UniProtKB/Swiss-Prot:P69924;db_xref=EcoGene:EG10661 EMBL gene 2348514 2348768 . + . ID=.4886;gene=yfaE;locus_tag=b2236;gene_synonym=ECK2228;gene_synonym=JW2230;db_xref=EcoGene:EG12360 EMBL CDS 2348514 2348768 . + 0 ID=.4887;gene=yfaE;locus_tag=b2236;gene_synonym=ECK2228;gene_synonym=JW2230;codon_start=1;transl_table=11;product=ferredoxin involved with ribonucleotide reductase diferric-tyrosyl radical (Y*) cofactor maintenance;protein_id=AAC75296.1;db_xref=GI:1788568;db_xref=ASAP:ABE-0007390;db_xref=UniProtKB/Swiss-Prot:P0ABW3;db_xref=EcoGene:EG12360 EMBL repeat_region 2348781 2348816 . + . ID=.4888;note=REP165 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 2348822 2349472 . - . ID=.4889;gene=inaA;locus_tag=b2237;gene_synonym=ECK2229;gene_synonym=JW2231;gene_synonym=yfaG;db_xref=EcoGene:EG11422 EMBL CDS 2348822 2349472 . - 0 ID=.4890;gene=inaA;locus_tag=b2237;gene_synonym=ECK2229;gene_synonym=JW2231;gene_synonym=yfaG;function=phenotype%3B Adaptations%2C atypical conditions;note=pH-inducible protein involved in stress response;codon_start=1;transl_table=11;product=acid-inducible Kdo/WaaP family putative kinase;protein_id=AAC75297.1;db_xref=GI:1788569;db_xref=ASAP:ABE-0007393;db_xref=UniProtKB/Swiss-Prot:P27294;db_xref=EcoGene:EG11422 EMBL gene 2349651 2349893 . + . ID=.4891;gene=yfaH;locus_tag=b2238;gene_synonym=ECK2230;gene_synonym=JW2232;pseudo=true;db_xref=EcoGene:EG12881 EMBL CDS 2349651 2349893 . + 0 ID=.4892;gene=yfaH;locus_tag=b2238;gene_synonym=ECK2230;gene_synonym=JW2232;note=pseudogene;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0007397;db_xref=UniProtKB/Swiss-Prot:P45505;db_xref=EcoGene:EG12881 EMBL gene 2349935 2351011 . - . ID=.4893;gene=glpQ;locus_tag=b2239;gene_synonym=ECK2231;gene_synonym=JW2233;db_xref=EcoGene:EG10399 EMBL CDS 2349935 2351011 . - 0 ID=.4894;gene=glpQ;locus_tag=b2239;gene_synonym=ECK2231;gene_synonym=JW2233;ec_number=3.1.4.46;function=enzyme%3B Central intermediary metabolism: Pool%2C multipurpose conversions;note=glycerophosphodiester phosphodiesterase%2C periplasmic%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0006071 - glycerol metabolic process;codon_start=1;transl_table=11;product=periplasmic glycerophosphodiester phosphodiesterase;protein_id=AAC75299.1;db_xref=GI:1788572;db_xref=ASAP:ABE-0007399;db_xref=UniProtKB/Swiss-Prot:P09394;db_xref=EcoGene:EG10399 EMBL gene 2351016 2352374 . - . ID=.4895;gene=glpT;locus_tag=b2240;gene_synonym=ECK2232;gene_synonym=JW2234;db_xref=EcoGene:EG10401 EMBL CDS 2351016 2352374 . - 0 ID=.4896;gene=glpT;locus_tag=b2240;gene_synonym=ECK2232;gene_synonym=JW2234;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=sn-glycerol-3-phosphate permease%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009060 - aerobic respiration%3B GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0006071 - glycerol metabolic process;codon_start=1;transl_table=11;product=sn-glycerol-3-phosphate transporter;protein_id=AAC75300.1;db_xref=GI:1788573;db_xref=ASAP:ABE-0007401;db_xref=UniProtKB/Swiss-Prot:P08194;db_xref=EcoGene:EG10401 EMBL gene 2352647 2354275 . + . ID=.4897;gene=glpA;locus_tag=b2241;gene_synonym=ECK2233;gene_synonym=JW2235;db_xref=EcoGene:EG10391 EMBL CDS 2352647 2354275 . + 0 ID=.4898;gene=glpA;locus_tag=b2241;gene_synonym=ECK2233;gene_synonym=JW2235;ec_number=1.1.5.3;function=enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;experiment=N-terminus verified by Edman degradation: PMID 3286606;note=sn-glycerol-3-phosphate dehydrogenase (anaerobic)%2C large subunit%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0006071 - glycerol metabolic process;codon_start=1;transl_table=11;product=anaerobic sn-glycerol-3-phosphate dehydrogenase%2C large FAD/NAD(P)-binding subunit;protein_id=AAC75301.1;db_xref=GI:1788574;db_xref=ASAP:ABE-0007422;db_xref=UniProtKB/Swiss-Prot:P0A9C0;db_xref=EcoGene:EG10391 EMBL gene 2354265 2355524 . + . ID=.4899;gene=glpB;locus_tag=b2242;gene_synonym=ECK2234;gene_synonym=glpC;gene_synonym=JW2236;gene_synonym=psi-51;db_xref=EcoGene:EG10392 EMBL CDS 2354265 2355524 . + 0 ID=.4900;gene=glpB;locus_tag=b2242;gene_synonym=ECK2234;gene_synonym=glpC;gene_synonym=JW2236;gene_synonym=psi-51;ec_number=1.1.5.3;function=enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;experiment=N-terminus verified by Edman degradation: PMID 3286606;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0006071 - glycerol metabolic process;codon_start=1;transl_table=11;product=anaerobic sn-glycerol-3-phosphate dehydrogenase membrane anchor subunit;protein_id=AAC75302.1;db_xref=GI:1788575;db_xref=ASAP:ABE-0007424;db_xref=UniProtKB/Swiss-Prot:P13033;db_xref=EcoGene:EG10392 EMBL gene 2355521 2356711 . + . ID=.4901;gene=glpC;locus_tag=b2243;gene_synonym=ECK2235;gene_synonym=glpB;gene_synonym=JW2237;db_xref=EcoGene:EG10393 EMBL CDS 2355521 2356711 . + 0 ID=.4902;gene=glpC;locus_tag=b2243;gene_synonym=ECK2235;gene_synonym=glpB;gene_synonym=JW2237;function=enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;experiment=N-terminus verified by Edman degradation: PMID 3286606;note=sn-glycerol-3-phosphate dehydrogenase (anaerobic)%2C K-small subunit%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0006071 - glycerol metabolic process;codon_start=1;transl_table=11;product=anaerobic sn-glycerol-3-phosphate dehydrogenase%2C C subunit%2C 4Fe-4S iron-sulfur cluster;protein_id=AAC75303.1;db_xref=GI:1788576;db_xref=ASAP:ABE-0007426;db_xref=UniProtKB/Swiss-Prot:P0A996;db_xref=EcoGene:EG10393 EMBL gene 2356904 2357803 . + . ID=.4903;gene=yfaD;locus_tag=b2244;gene_synonym=ECK2236;gene_synonym=JW2238;db_xref=EcoGene:EG12323 EMBL CDS 2356904 2357803 . + 0 ID=.4904;gene=yfaD;locus_tag=b2244;gene_synonym=ECK2236;gene_synonym=JW2238;codon_start=1;transl_table=11;product=transposase_31 family protein;protein_id=AAC75304.1;db_xref=GI:1788577;db_xref=ASAP:ABE-0007429;db_xref=UniProtKB/Swiss-Prot:P37014;db_xref=EcoGene:EG12323 EMBL gene 2357804 2358001 . + . ID=.4905;gene=ypaA;locus_tag=b4543;gene_synonym=ECK2237;gene_synonym=JW5964;pseudo=true;db_xref=EcoGene:EG14427 EMBL CDS 2357804 2358001 . + 0 ID=.4906;gene=ypaA;locus_tag=b4543;gene_synonym=ECK2237;gene_synonym=JW5964;note=pseudogene%2C C-terminal fragment%2C Transposase_31 family;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0285064;db_xref=EcoGene:EG14427 EMBL gene 2358042 2358845 . - . ID=.4907;gene=rhmA;locus_tag=b2245;gene_synonym=ECK2238;gene_synonym=JW2239;gene_synonym=yfaU;db_xref=EcoGene:EG14083 EMBL CDS 2358042 2358845 . - 0 ID=.4908;gene=rhmA;locus_tag=b2245;gene_synonym=ECK2238;gene_synonym=JW2239;gene_synonym=yfaU;function=enzyme%3B Sugar metabolism;codon_start=1;transl_table=11;product=2-keto-3-deoxy-L-rhamnonate aldolase;protein_id=AAC75305.1;db_xref=GI:1788578;db_xref=ASAP:ABE-0007431;db_xref=UniProtKB/Swiss-Prot:P76469;db_xref=EcoGene:EG14083 EMBL gene 2358863 2360152 . - . ID=.4909;gene=rhmT;locus_tag=b2246;gene_synonym=ECK2239;gene_synonym=JW2240;gene_synonym=yfaV;db_xref=EcoGene:EG14084 EMBL CDS 2358863 2360152 . - 0 ID=.4910;gene=rhmT;locus_tag=b2246;gene_synonym=ECK2239;gene_synonym=JW2240;gene_synonym=yfaV;function=putative transport%3B Not classified;note=putative transport protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative L-rhamnonate transporter;protein_id=AAC75306.2;db_xref=GI:87082071;db_xref=ASAP:ABE-0007433;db_xref=UniProtKB/Swiss-Prot:P76470;db_xref=EcoGene:EG14084 EMBL gene 2360209 2361414 . - . ID=.4911;gene=rhmD;locus_tag=b2247;gene_synonym=ECK2240;gene_synonym=JW2241;gene_synonym=yfaW;db_xref=EcoGene:EG14085 EMBL CDS 2360209 2361414 . - 0 ID=.4912;gene=rhmD;locus_tag=b2247;gene_synonym=ECK2240;gene_synonym=JW2241;gene_synonym=yfaW;function=enzyme%3B Sugar metabolism;note=putative racemase;codon_start=1;transl_table=11;product=L-rhamnonate dehydratase;protein_id=AAC75307.2;db_xref=GI:226510960;db_xref=ASAP:ABE-0007436;db_xref=UniProtKB/Swiss-Prot:P77215;db_xref=EcoGene:EG14085 EMBL gene 2361429 2362211 . - . ID=.4913;gene=rhmR;locus_tag=b2248;gene_synonym=ECK2241;gene_synonym=JW2242;gene_synonym=yfaX;db_xref=EcoGene:EG14086 EMBL CDS 2361429 2362211 . - 0 ID=.4914;gene=rhmR;locus_tag=b2248;gene_synonym=ECK2241;gene_synonym=JW2242;gene_synonym=yfaX;function=putative regulator%3B Not classified;note=putative regulator%3B GO_process: GO:0006350 - transcription%3B GO_process: GO:0006355 - regulation of transcription%2C DNA-dependent;codon_start=1;transl_table=11;product=putative DNA-binding transcriptional regulator for the rhm operon;protein_id=AAC75308.1;db_xref=GI:1788581;db_xref=ASAP:ABE-0007438;db_xref=UniProtKB/Swiss-Prot:P77732;db_xref=EcoGene:EG14086 EMBL gene 2362431 2363633 . - . ID=.4915;gene=yfaY;locus_tag=b2249;gene_synonym=cinA;gene_synonym=ECK2242;gene_synonym=JW2243;db_xref=EcoGene:EG14087 EMBL CDS 2362431 2363633 . - 0 ID=.4916;gene=yfaY;locus_tag=b2249;gene_synonym=cinA;gene_synonym=ECK2242;gene_synonym=JW2243;codon_start=1;transl_table=11;product=inactive PncC family protein;protein_id=AAC75309.1;db_xref=GI:1788583;db_xref=ASAP:ABE-0007441;db_xref=UniProtKB/Swiss-Prot:P77808;db_xref=EcoGene:EG14087 EMBL gene 2363733 2364275 . - . ID=.4917;gene=yfaZ;locus_tag=b2250;gene_synonym=ECK2243;gene_synonym=JW5371;db_xref=EcoGene:EG14088 EMBL CDS 2363733 2364275 . - 0 ID=.4918;gene=yfaZ;locus_tag=b2250;gene_synonym=ECK2243;gene_synonym=JW5371;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane;codon_start=1;transl_table=11;product=outer membrane protein%2C putative porin;protein_id=AAC75310.2;db_xref=GI:87082072;db_xref=ASAP:ABE-0007445;db_xref=UniProtKB/Swiss-Prot:P76471;db_xref=EcoGene:EG14088 EMBL gene 2364554 2364979 . + . ID=.4919;gene=nudI;locus_tag=b2251;gene_synonym=ECK2244;gene_synonym=JW2245;gene_synonym=yfaO;db_xref=EcoGene:EG13275 EMBL CDS 2364554 2364979 . + 0 ID=.4920;gene=nudI;locus_tag=b2251;gene_synonym=ECK2244;gene_synonym=JW2245;gene_synonym=yfaO;codon_start=1;transl_table=11;product=nucleoside triphosphatase;protein_id=AAC75311.1;db_xref=GI:1788585;db_xref=ASAP:ABE-0007449;db_xref=UniProtKB/Swiss-Prot:P52006;db_xref=EcoGene:EG13275 EMBL gene 2365018 2365620 . - . ID=.4921;gene=ais;locus_tag=b2252;gene_synonym=ECK2245;gene_synonym=JW2246;gene_synonym=pagH;gene_synonym=pmrG;db_xref=EcoGene:EG13155 EMBL CDS 2365018 2365620 . - 0 ID=.4922;gene=ais;locus_tag=b2252;gene_synonym=ECK2245;gene_synonym=JW2246;gene_synonym=pagH;gene_synonym=pmrG;function=phenotype%3B Not classified;note=protein induced by aluminum;codon_start=1;transl_table=11;product=putative LPS core heptose(II)-phosphate phosphatase;protein_id=AAC75312.1;db_xref=GI:1788586;db_xref=ASAP:ABE-0007451;db_xref=UniProtKB/Swiss-Prot:P45565;db_xref=EcoGene:EG13155 EMBL gene 2365928 2367067 . + . ID=.4923;gene=arnB;locus_tag=b2253;gene_synonym=ECK2246;gene_synonym=JW5372;gene_synonym=pgbP1;gene_synonym=pmrH;gene_synonym=yfbE;db_xref=EcoGene:EG14089 EMBL CDS 2365928 2367067 . + 0 ID=.4924;gene=arnB;locus_tag=b2253;gene_synonym=ECK2246;gene_synonym=JW5372;gene_synonym=pgbP1;gene_synonym=pmrH;gene_synonym=yfbE;function=putative enzyme%3B Not classified;note=putative enzyme;codon_start=1;transl_table=11;product=uridine 5'-(beta-1-threo-pentapyranosyl-4-ulose diphosphate) aminotransferase%2C PLP-dependent;protein_id=AAC75313.3;db_xref=GI:145693159;db_xref=ASAP:ABE-0007456;db_xref=UniProtKB/Swiss-Prot:P77690;db_xref=EcoGene:EG14089 EMBL gene 2367071 2368039 . + . ID=.4925;gene=arnC;locus_tag=b2254;gene_synonym=ECK2247;gene_synonym=JW2248;gene_synonym=ORF2;gene_synonym=pmrF;gene_synonym=yfbF;db_xref=EcoGene:EG14090 EMBL CDS 2367071 2368039 . + 0 ID=.4926;gene=arnC;locus_tag=b2254;gene_synonym=ECK2247;gene_synonym=JW2248;gene_synonym=ORF2;gene_synonym=pmrF;gene_synonym=yfbF;function=putative enzyme%3B Not classified;note=putative sugar transferase;codon_start=1;transl_table=11;product=undecaprenyl phosphate-L-Ara4FN transferase;protein_id=AAC75314.1;db_xref=GI:1788588;db_xref=ASAP:ABE-0007458;db_xref=UniProtKB/Swiss-Prot:P77757;db_xref=EcoGene:EG14090 EMBL gene 2368039 2370021 . + . ID=.4927;gene=arnA;locus_tag=b2255;gene_synonym=ECK2248;gene_synonym=JW2249;gene_synonym=pbgP3;gene_synonym=pmrI;gene_synonym=SAF;gene_synonym=yfbG;db_xref=EcoGene:EG14091 EMBL CDS 2368039 2370021 . + 0 ID=.4928;gene=arnA;locus_tag=b2255;gene_synonym=ECK2248;gene_synonym=JW2249;gene_synonym=pbgP3;gene_synonym=pmrI;gene_synonym=SAF;gene_synonym=yfbG;ec_number=2.1.2.-;ec_number=4.1.1.35;function=putative enzyme%3B Not classified;experiment=N-terminus verified by Edman degradation: PMID 11248028;note=putative transformylase;codon_start=1;transl_table=11;product=fused UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase;protein_id=AAC75315.1;db_xref=GI:1788589;db_xref=ASAP:ABE-0007460;db_xref=UniProtKB/Swiss-Prot:P77398;db_xref=EcoGene:EG14091 EMBL gene 2370018 2370908 . + . ID=.4929;gene=arnD;locus_tag=b2256;gene_synonym=ECK2249;gene_synonym=JW2250;gene_synonym=pbgP4;gene_synonym=pmrJ;gene_synonym=yfbH;db_xref=EcoGene:EG14092 EMBL CDS 2370018 2370908 . + 0 ID=.4930;gene=arnD;locus_tag=b2256;gene_synonym=ECK2249;gene_synonym=JW2250;gene_synonym=pbgP4;gene_synonym=pmrJ;gene_synonym=yfbH;codon_start=1;transl_table=11;product=undecaprenyl phosphate-alpha-L-ara4FN deformylase;protein_id=AAC75316.1;db_xref=GI:1788590;db_xref=ASAP:ABE-0007462;db_xref=UniProtKB/Swiss-Prot:P76472;db_xref=EcoGene:EG14092 EMBL gene 2370908 2372560 . + . ID=.4931;gene=arnT;locus_tag=b2257;gene_synonym=ECK2250;gene_synonym=JW2251;gene_synonym=pbgE1;gene_synonym=pmrK;gene_synonym=pqaB;gene_synonym=yfbI;db_xref=EcoGene:EG14093 EMBL CDS 2370908 2372560 . + 0 ID=.4932;gene=arnT;locus_tag=b2257;gene_synonym=ECK2250;gene_synonym=JW2251;gene_synonym=pbgE1;gene_synonym=pmrK;gene_synonym=pqaB;gene_synonym=yfbI;note=4-amino-4-deoxy-L-arabinose transferase (lipid A modification)%3B GO_process: GO:0006950 - response to stress;codon_start=1;transl_table=11;product=4-amino-4-deoxy-L-arabinose transferase;protein_id=AAC75317.1;db_xref=GI:1788591;db_xref=ASAP:ABE-0007464;db_xref=UniProtKB/Swiss-Prot:P76473;db_xref=EcoGene:EG14093 EMBL gene 2372557 2372892 . + . ID=.4933;gene=arnE;locus_tag=b4544;gene_synonym=ECK2251;gene_synonym=JW2252;gene_synonym=pbgE2;gene_synonym=pmrL;gene_synonym=yfbW;db_xref=EcoGene:EG14344 EMBL CDS 2372557 2372892 . + 0 ID=.4934;gene=arnE;locus_tag=b4544;gene_synonym=ECK2251;gene_synonym=JW2252;gene_synonym=pbgE2;gene_synonym=pmrL;gene_synonym=yfbW;function=transport%3B Transport of small molecules: lipids;note=GO_component: GO:0016021 - integral to membrane;codon_start=1;transl_table=11;product=undecaprenyl phosphate-alpha-L-ara4N exporter%3B flippase ArnEF subunit;protein_id=ABD18693.1;db_xref=GI:87082074;db_xref=ASAP:ABE-0285065;db_xref=UniProtKB/Swiss-Prot:Q47377;db_xref=EcoGene:EG14344 EMBL gene 2372892 2373278 . + . ID=.4935;gene=arnF;locus_tag=b2258;gene_synonym=ECK2252;gene_synonym=JW5373;gene_synonym=pbgE3;gene_synonym=pmrM;gene_synonym=yfbJ;db_xref=EcoGene:EG14094 EMBL CDS 2372892 2373278 . + 0 ID=.4936;gene=arnF;locus_tag=b2258;gene_synonym=ECK2252;gene_synonym=JW5373;gene_synonym=pbgE3;gene_synonym=pmrM;gene_synonym=yfbJ;function=transport%3B Transport of small molecules: lipids;note=putative transport/receptor protein;codon_start=1;transl_table=11;product=undecaprenyl phosphate-alpha-L-ara4N exporter%3B flippase ArnEF subunit;protein_id=AAC75318.2;db_xref=GI:87082075;db_xref=ASAP:ABE-0007466;db_xref=UniProtKB/Swiss-Prot:P76474;db_xref=EcoGene:EG14094 EMBL gene 2373272 2373538 . - . ID=.4937;gene=pmrD;locus_tag=b2259;gene_synonym=ECK2253;gene_synonym=JW2254;db_xref=EcoGene:EG12671 EMBL CDS 2373272 2373538 . - 0 ID=.4938;gene=pmrD;locus_tag=b2259;gene_synonym=ECK2253;gene_synonym=JW2254;function=putative transport%3B Drug/analog sensitivity;note=an active Salmonella PmrD ortholog blocks dephosphorylation of PmrA(BasR) by PmrB(BasS)%3B GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=inactive two-component system connector protein;protein_id=AAC75319.2;db_xref=GI:87082076;db_xref=ASAP:ABE-0007468;db_xref=UniProtKB/Swiss-Prot:P37590;db_xref=EcoGene:EG12671 EMBL gene 2373648 2375003 . - . ID=.4939;gene=menE;locus_tag=b2260;gene_synonym=ECK2254;gene_synonym=JW2255;db_xref=EcoGene:EG12437 EMBL CDS 2373648 2375003 . - 0 ID=.4940;gene=menE;locus_tag=b2260;gene_synonym=ECK2254;gene_synonym=JW2255;ec_number=6.2.1.26;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Menaquinone%2C ubiquinone;note=GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=O-succinylbenzoate-CoA ligase;protein_id=AAC75320.1;db_xref=GI:1788595;db_xref=ASAP:ABE-0007471;db_xref=UniProtKB/Swiss-Prot:P37353;db_xref=EcoGene:EG12437 EMBL gene 2375000 2375962 . - . ID=.4941;gene=menC;locus_tag=b2261;gene_synonym=ECK2255;gene_synonym=JW2256;db_xref=EcoGene:EG11532 EMBL CDS 2375000 2375962 . - 0 ID=.4942;gene=menC;locus_tag=b2261;gene_synonym=ECK2255;gene_synonym=JW2256;ec_number=4.2.1.-;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Menaquinone%2C ubiquinone;note=o-succinylbenzoyl-CoA synthase%3B conversion of chorismate to 2-o-succinylbenzoyl-CoA%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=O-succinylbenzoyl-CoA synthase;protein_id=AAC75321.1;db_xref=GI:1788596;db_xref=ASAP:ABE-0007473;db_xref=UniProtKB/Swiss-Prot:P29208;db_xref=EcoGene:EG11532 EMBL gene 2375962 2376819 . - . ID=.4943;gene=menB;locus_tag=b2262;gene_synonym=ECK2256;gene_synonym=JW2257;db_xref=EcoGene:EG11368 EMBL CDS 2375962 2376819 . - 0 ID=.4944;gene=menB;locus_tag=b2262;gene_synonym=ECK2256;gene_synonym=JW2257;ec_number=4.1.3.36;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Menaquinone%2C ubiquinone;note=dihydroxynaphtoic acid synthetase%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=dihydroxynaphthoic acid synthetase;protein_id=AAC75322.1;db_xref=GI:1788597;db_xref=ASAP:ABE-0007476;db_xref=UniProtKB/Swiss-Prot:P0ABU0;db_xref=EcoGene:EG11368 EMBL gene 2376834 2377592 . - . ID=.4945;gene=menH;locus_tag=b2263;gene_synonym=ECK2257;gene_synonym=JW2258;gene_synonym=yfbB;db_xref=EcoGene:EG12438 EMBL CDS 2376834 2377592 . - 0 ID=.4946;gene=menH;locus_tag=b2263;gene_synonym=ECK2257;gene_synonym=JW2258;gene_synonym=yfbB;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Menaquinone%2C ubiquinone;note=putative enzyme;codon_start=1;transl_table=11;product=2-succinyl-6-hydroxy-2%2C 4-cyclohexadiene-1-carboxylate synthase;protein_id=AAC75323.1;db_xref=GI:1788598;db_xref=ASAP:ABE-0007478;db_xref=UniProtKB/Swiss-Prot:P37355;db_xref=EcoGene:EG12438 EMBL gene 2377589 2379259 . - . ID=.4947;gene=menD;locus_tag=b2264;gene_synonym=ECK2258;gene_synonym=JW5374;db_xref=EcoGene:EG10579 EMBL CDS 2377589 2379259 . - 0 ID=.4948;gene=menD;locus_tag=b2264;gene_synonym=ECK2258;gene_synonym=JW5374;ec_number=2.2.1.9;ec_number=4.1.1.71;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Menaquinone%2C ubiquinone;note=2-oxoglutarate decarboxylase%3B SHCHC synthase%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase%3B SEPHCHC synthase;protein_id=AAC75324.1;db_xref=GI:1788599;db_xref=ASAP:ABE-0007482;db_xref=UniProtKB/Swiss-Prot:P17109;db_xref=EcoGene:EG10579 EMBL gene 2379348 2380643 . - . ID=.4949;gene=menF;locus_tag=b2265;gene_synonym=ECK2259;gene_synonym=JW2260;gene_synonym=yfbA;db_xref=EcoGene:EG12362 EMBL CDS 2379348 2380643 . - 0 ID=.4950;gene=menF;locus_tag=b2265;gene_synonym=ECK2259;gene_synonym=JW2260;gene_synonym=yfbA;ec_number=5.4.4.2;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Menaquinone%2C ubiquinone;note=isochorismate hydroxymutase 2%2C menaquinone biosynthesis%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=isochorismate synthase 2;protein_id=AAC75325.2;db_xref=GI:87082077;db_xref=ASAP:ABE-0007485;db_xref=UniProtKB/Swiss-Prot:P38051;db_xref=EcoGene:EG12362 EMBL gene 2380722 2381027 . - . ID=.4951;gene=elaB;locus_tag=b2266;gene_synonym=ECK2260;gene_synonym=JW2261;gene_synonym=yfbD;db_xref=EcoGene:EG13185 EMBL CDS 2380722 2381027 . - 0 ID=.4952;gene=elaB;locus_tag=b2266;gene_synonym=ECK2260;gene_synonym=JW2261;gene_synonym=yfbD;codon_start=1;transl_table=11;product=putative membrane-anchored DUF883 family ribosome-binding protein;protein_id=AAC75326.1;db_xref=GI:1788601;db_xref=ASAP:ABE-0007487;db_xref=UniProtKB/Swiss-Prot:P0AEH5;db_xref=EcoGene:EG13185 EMBL gene 2381082 2381543 . - . ID=.4953;gene=elaA;locus_tag=b2267;gene_synonym=ECK2261;gene_synonym=JW2262;gene_synonym=yfbC;db_xref=EcoGene:EG13184 EMBL CDS 2381082 2381543 . - 0 ID=.4954;gene=elaA;locus_tag=b2267;gene_synonym=ECK2261;gene_synonym=JW2262;gene_synonym=yfbC;codon_start=1;transl_table=11;product=GNAT family putative N-acetyltransferase;protein_id=AAC75327.1;db_xref=GI:1788602;db_xref=ASAP:ABE-0007489;db_xref=UniProtKB/Swiss-Prot:P0AEH3;db_xref=EcoGene:EG13184 EMBL gene 2381608 2382525 . + . ID=.4955;gene=rbn;locus_tag=b2268;gene_synonym=ECK2262;gene_synonym=ecoZ;gene_synonym=elaC;gene_synonym=JW2263;gene_synonym=rnz;gene_synonym=zipD;db_xref=EcoGene:EG14260 EMBL CDS 2381608 2382525 . + 0 ID=.4956;gene=rbn;locus_tag=b2268;gene_synonym=ECK2262;gene_synonym=ecoZ;gene_synonym=elaC;gene_synonym=JW2263;gene_synonym=rnz;gene_synonym=zipD;codon_start=1;transl_table=11;product=RNase BN%2C tRNA processing enzyme;protein_id=AAC75328.2;db_xref=GI:87082078;db_xref=ASAP:ABE-0007496;db_xref=UniProtKB/Swiss-Prot:P0A8V0;db_xref=EcoGene:EG14260 EMBL gene 2382713 2383924 . + . ID=.4957;gene=elaD;locus_tag=b2269;gene_synonym=ECK2263;gene_synonym=JW5840;db_xref=EcoGene:EG14261 EMBL CDS 2382713 2383924 . + 0 ID=.4958;gene=elaD;locus_tag=b2269;gene_synonym=ECK2263;gene_synonym=JW5840;function=putative enzyme%3B Not classified;note=putative sulfatase / phosphatase;codon_start=1;transl_table=11;product=protease%2C capable of cleaving an AMC-ubiquitin model substrate;protein_id=AAC75329.1;db_xref=GI:1788604;db_xref=ASAP:ABE-0007499;db_xref=UniProtKB/Swiss-Prot:Q47013;db_xref=EcoGene:EG14261 EMBL gene 2383995 2385722 . - . ID=.4959;gene=yfbK;locus_tag=b2270;gene_synonym=ECK2264;gene_synonym=JW2265;db_xref=EcoGene:EG14095 EMBL CDS 2383995 2385722 . - 0 ID=.4960;gene=yfbK;locus_tag=b2270;gene_synonym=ECK2264;gene_synonym=JW2265;codon_start=1;transl_table=11;product=Von Willebrand factor domain putative lipoprotein;protein_id=AAC75330.1;db_xref=GI:1788606;db_xref=ASAP:ABE-0007501;db_xref=UniProtKB/Swiss-Prot:P76481;db_xref=EcoGene:EG14095 EMBL gene 2385860 2386831 . + . ID=.4961;gene=yfbL;locus_tag=b2271;gene_synonym=ECK2265;gene_synonym=JW2266;db_xref=EcoGene:EG14096 EMBL CDS 2385860 2386831 . + 0 ID=.4962;gene=yfbL;locus_tag=b2271;gene_synonym=ECK2265;gene_synonym=JW2266;function=putative enzyme%3B Not classified;note=putative aminopeptidase;codon_start=1;transl_table=11;product=putative M28A family peptidase;protein_id=AAC75331.2;db_xref=GI:87082079;db_xref=ASAP:ABE-0007506;db_xref=UniProtKB/Swiss-Prot:P76482;db_xref=EcoGene:EG14096 EMBL gene 2386934 2387437 . + . ID=.4963;gene=yfbM;locus_tag=b2272;gene_synonym=ECK2266;gene_synonym=JW2267;db_xref=EcoGene:EG14097 EMBL CDS 2386934 2387437 . + 0 ID=.4964;gene=yfbM;locus_tag=b2272;gene_synonym=ECK2266;gene_synonym=JW2267;codon_start=1;transl_table=11;product=DUF1877 family protein;protein_id=AAC75332.1;db_xref=GI:1788608;db_xref=ASAP:ABE-0007509;db_xref=UniProtKB/Swiss-Prot:P76483;db_xref=EcoGene:EG14097 EMBL gene 2387710 2388426 . - . ID=.4965;gene=yfbN;locus_tag=b2273;gene_synonym=ECK2267;gene_synonym=JW2268;db_xref=EcoGene:EG14098 EMBL CDS 2387710 2388426 . - 0 ID=.4966;gene=yfbN;locus_tag=b2273;gene_synonym=ECK2267;gene_synonym=JW2268;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC75333.1;db_xref=GI:1788609;db_xref=ASAP:ABE-0007511;db_xref=UniProtKB/Swiss-Prot:P76484;db_xref=EcoGene:EG14098 EMBL gene 2388635 2389057 . + . ID=.4967;gene=yfbO;locus_tag=b2274;gene_synonym=ECK2268;gene_synonym=JW2269;db_xref=EcoGene:EG14099 EMBL CDS 2388635 2389057 . + 0 ID=.4968;gene=yfbO;locus_tag=b2274;gene_synonym=ECK2268;gene_synonym=JW2269;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC75334.2;db_xref=GI:226510961;db_xref=ASAP:ABE-0007518;db_xref=UniProtKB/Swiss-Prot:P76485;db_xref=EcoGene:EG14099 EMBL gene 2389116 2389964 . + . ID=.4969;gene=yfbP;locus_tag=b2275;gene_synonym=ECK2269;gene_synonym=JW2270;db_xref=EcoGene:EG14100 EMBL CDS 2389116 2389964 . + 0 ID=.4970;gene=yfbP;locus_tag=b2275;gene_synonym=ECK2269;gene_synonym=JW2270;codon_start=1;transl_table=11;product=TPR-like repeats-containing protein;protein_id=AAC75335.2;db_xref=GI:345297176;db_xref=ASAP:ABE-0007524;db_xref=UniProtKB/Swiss-Prot:P76486;db_xref=EcoGene:EG14100 EMBL gene 2390048 2391505 . - . ID=.4971;gene=nuoN;locus_tag=b2276;gene_synonym=ECK2270;gene_synonym=JW2271;db_xref=EcoGene:EG12093 EMBL CDS 2390048 2391505 . - 0 ID=.4972;gene=nuoN;locus_tag=b2276;gene_synonym=ECK2270;gene_synonym=JW2271;function=enzyme%3B Energy metabolism%2C carbon: Aerobic respiration;note=NADH dehydrogenase I chain N%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009060 - aerobic respiration%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=NADH:ubiquinone oxidoreductase%2C membrane subunit N;protein_id=AAC75336.2;db_xref=GI:145693160;db_xref=ASAP:ABE-0007526;db_xref=UniProtKB/Swiss-Prot:P0AFF0;db_xref=EcoGene:EG12093 EMBL gene 2391512 2393041 . - . ID=.4973;gene=nuoM;locus_tag=b2277;gene_synonym=ECK2271;gene_synonym=JW2272;gene_synonym=nuoA;db_xref=EcoGene:EG11773 EMBL CDS 2391512 2393041 . - 0 ID=.4974;gene=nuoM;locus_tag=b2277;gene_synonym=ECK2271;gene_synonym=JW2272;gene_synonym=nuoA;function=enzyme%3B Energy metabolism%2C carbon: Aerobic respiration;note=NADH dehydrogenase I chain M%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009060 - aerobic respiration%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=NADH:ubiquinone oxidoreductase%2C membrane subunit M;protein_id=AAC75337.1;db_xref=GI:1788613;db_xref=ASAP:ABE-0007529;db_xref=UniProtKB/Swiss-Prot:P0AFE8;db_xref=EcoGene:EG11773 EMBL repeat_region 2393131 2393166 . + . ID=.4975;note=REP166 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 2393205 2395046 . - . ID=.4976;gene=nuoL;locus_tag=b2278;gene_synonym=ECK2272;gene_synonym=JW2273;db_xref=EcoGene:EG12092 EMBL CDS 2393205 2395046 . - 0 ID=.4977;gene=nuoL;locus_tag=b2278;gene_synonym=ECK2272;gene_synonym=JW2273;function=enzyme%3B Energy metabolism%2C carbon: Aerobic respiration;note=NADH dehydrogenase I chain L%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009060 - aerobic respiration%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=NADH:ubiquinone oxidoreductase%2C membrane subunit L;protein_id=AAC75338.1;db_xref=GI:1788614;db_xref=ASAP:ABE-0007532;db_xref=UniProtKB/Swiss-Prot:P33607;db_xref=EcoGene:EG12092 EMBL gene 2395043 2395345 . - . ID=.4978;gene=nuoK;locus_tag=b2279;gene_synonym=ECK2273;gene_synonym=JW2274;db_xref=EcoGene:EG12091 EMBL CDS 2395043 2395345 . - 0 ID=.4979;gene=nuoK;locus_tag=b2279;gene_synonym=ECK2273;gene_synonym=JW2274;function=enzyme%3B Energy metabolism%2C carbon: Aerobic respiration;note=NADH dehydrogenase I chain K%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009060 - aerobic respiration%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=NADH:ubiquinone oxidoreductase%2C membrane subunit K;protein_id=AAC75339.1;db_xref=GI:1788615;db_xref=ASAP:ABE-0007534;db_xref=UniProtKB/Swiss-Prot:P0AFE4;db_xref=EcoGene:EG12091 EMBL gene 2395342 2395896 . - . ID=.4980;gene=nuoJ;locus_tag=b2280;gene_synonym=ECK2274;gene_synonym=JW2275;db_xref=EcoGene:EG12090 EMBL CDS 2395342 2395896 . - 0 ID=.4981;gene=nuoJ;locus_tag=b2280;gene_synonym=ECK2274;gene_synonym=JW2275;function=enzyme%3B Energy metabolism%2C carbon: Aerobic respiration;note=NADH dehydrogenase I chain J%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009060 - aerobic respiration%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=NADH:ubiquinone oxidoreductase%2C membrane subunit J;protein_id=AAC75340.1;db_xref=GI:1788616;db_xref=ASAP:ABE-0007536;db_xref=UniProtKB/Swiss-Prot:P0AFE0;db_xref=EcoGene:EG12090 EMBL gene 2395908 2396450 . - . ID=.4982;gene=nuoI;locus_tag=b2281;gene_synonym=ECK2275;gene_synonym=JW2276;db_xref=EcoGene:EG12089 EMBL CDS 2395908 2396450 . - 0 ID=.4983;gene=nuoI;locus_tag=b2281;gene_synonym=ECK2275;gene_synonym=JW2276;ec_number=1.6.5.3;function=enzyme%3B Energy metabolism%2C carbon: Aerobic respiration;experiment=N-terminus verified by Edman degradation: PMID 9298646%2C11416161;note=NADH dehydrogenase I chain I%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009060 - aerobic respiration%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=NADH:ubiquinone oxidoreductase%2C chain I;protein_id=AAC75341.1;db_xref=GI:1788617;db_xref=ASAP:ABE-0007539;db_xref=UniProtKB/Swiss-Prot:P0AFD6;db_xref=EcoGene:EG12089 EMBL gene 2396465 2397442 . - . ID=.4984;gene=nuoH;locus_tag=b2282;gene_synonym=ECK2276;gene_synonym=JW2277;db_xref=EcoGene:EG12088 EMBL CDS 2396465 2397442 . - 0 ID=.4985;gene=nuoH;locus_tag=b2282;gene_synonym=ECK2276;gene_synonym=JW2277;function=enzyme%3B Energy metabolism%2C carbon: Aerobic respiration;note=NADH dehydrogenase I chain H%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009060 - aerobic respiration%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=NADH:ubiquinone oxidoreductase%2C membrane subunit H;protein_id=AAC75342.1;db_xref=GI:1788618;db_xref=ASAP:ABE-0007541;db_xref=UniProtKB/Swiss-Prot:P0AFD4;db_xref=EcoGene:EG12088 EMBL gene 2397439 2400165 . - . ID=.4986;gene=nuoG;locus_tag=b2283;gene_synonym=ECK2277;gene_synonym=JW2278;db_xref=EcoGene:EG12087 EMBL CDS 2397439 2400165 . - 0 ID=.4987;gene=nuoG;locus_tag=b2283;gene_synonym=ECK2277;gene_synonym=JW2278;ec_number=1.6.5.3;function=enzyme%3B Energy metabolism%2C carbon: Aerobic respiration;note=NADH dehydrogenase I chain G%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009060 - aerobic respiration%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=NADH:ubiquinone oxidoreductase%2C chain G;protein_id=AAC75343.2;db_xref=GI:145693161;db_xref=ASAP:ABE-0007543;db_xref=UniProtKB/Swiss-Prot:P33602;db_xref=EcoGene:EG12087 EMBL gene 2400218 2401555 . - . ID=.4988;gene=nuoF;locus_tag=b2284;gene_synonym=ECK2278;gene_synonym=JW2279;gene_synonym=nuoB;db_xref=EcoGene:EG11774 EMBL CDS 2400218 2401555 . - 0 ID=.4989;gene=nuoF;locus_tag=b2284;gene_synonym=ECK2278;gene_synonym=JW2279;gene_synonym=nuoB;ec_number=1.6.5.3;function=enzyme%3B Energy metabolism%2C carbon: Aerobic respiration;experiment=N-terminus verified by Edman degradation: PMID 11416161%2C11997136;note=NADH dehydrogenase I chain F%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009060 - aerobic respiration%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=NADH:ubiquinone oxidoreductase%2C chain F;protein_id=AAC75344.1;db_xref=GI:1788620;db_xref=ASAP:ABE-0007545;db_xref=UniProtKB/Swiss-Prot:P31979;db_xref=EcoGene:EG11774 EMBL gene 2401552 2402052 . - . ID=.4990;gene=nuoE;locus_tag=b2285;gene_synonym=ECK2279;gene_synonym=JW2280;db_xref=EcoGene:EG12086 EMBL CDS 2401552 2402052 . - 0 ID=.4991;gene=nuoE;locus_tag=b2285;gene_synonym=ECK2279;gene_synonym=JW2280;ec_number=1.6.5.3;function=enzyme%3B Energy metabolism%2C carbon: Aerobic respiration;experiment=N-terminus verified by Edman degradation: PMID 11416161%2C11997136;note=NADH dehydrogenase I chain E%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009060 - aerobic respiration%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=NADH:ubiquinone oxidoreductase%2C chain E;protein_id=AAC75345.1;db_xref=GI:1788621;db_xref=ASAP:ABE-0007547;db_xref=UniProtKB/Swiss-Prot:P0AFD1;db_xref=EcoGene:EG12086 EMBL gene 2402055 2403845 . - . ID=.4992;gene=nuoC;locus_tag=b2286;gene_synonym=ECK2280;gene_synonym=JW5375;gene_synonym=nuoCD;gene_synonym=nuoD;db_xref=EcoGene:EG12084 EMBL CDS 2402055 2403845 . - 0 ID=.4993;gene=nuoC;locus_tag=b2286;gene_synonym=ECK2280;gene_synonym=JW5375;gene_synonym=nuoCD;gene_synonym=nuoD;ec_number=1.6.5.3;function=enzyme%3B Energy metabolism%2C carbon: Aerobic respiration;note=NADH dehydrogenase I chain C%2C D%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009060 - aerobic respiration%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=NADH:ubiquinone oxidoreductase%2C fused CD subunit;protein_id=AAC75346.2;db_xref=GI:145693162;db_xref=ASAP:ABE-0007549;db_xref=UniProtKB/Swiss-Prot:P33599;db_xref=EcoGene:EG12084 EMBL gene 2403951 2404613 . - . ID=.4994;gene=nuoB;locus_tag=b2287;gene_synonym=ECK2281;gene_synonym=JW5875;db_xref=EcoGene:EG12083 EMBL CDS 2403951 2404613 . - 0 ID=.4995;gene=nuoB;locus_tag=b2287;gene_synonym=ECK2281;gene_synonym=JW5875;ec_number=1.6.5.3;function=enzyme%3B Energy metabolism%2C carbon: Aerobic respiration;experiment=N-terminus verified by Edman degradation: PMID 7607227%2C11997136;note=NADH dehydrogenase I chain B%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009060 - aerobic respiration%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=NADH:ubiquinone oxidoreductase%2C chain B;protein_id=AAC75347.1;db_xref=GI:1788624;db_xref=ASAP:ABE-0007551;db_xref=UniProtKB/Swiss-Prot:P0AFC7;db_xref=EcoGene:EG12083 EMBL gene 2404629 2405072 . - . ID=.4996;gene=nuoA;locus_tag=b2288;gene_synonym=ECK2282;gene_synonym=JW2283;db_xref=EcoGene:EG12082 EMBL CDS 2404629 2405072 . - 0 ID=.4997;gene=nuoA;locus_tag=b2288;gene_synonym=ECK2282;gene_synonym=JW2283;function=enzyme%3B Energy metabolism%2C carbon: Aerobic respiration;note=NADH dehydrogenase I chain A%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009060 - aerobic respiration%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=NADH:ubiquinone oxidoreductase%2C membrane subunit A;protein_id=AAC75348.1;db_xref=GI:1788625;db_xref=ASAP:ABE-0007553;db_xref=UniProtKB/Swiss-Prot:P0AFC3;db_xref=EcoGene:EG12082 EMBL gene 2405703 2406641 . - . ID=.4998;gene=lrhA;locus_tag=b2289;gene_synonym=ECK2283;gene_synonym=genR;gene_synonym=hexA;gene_synonym=JW2284;db_xref=EcoGene:EG12123 EMBL CDS 2405703 2406641 . - 0 ID=.4999;gene=lrhA;locus_tag=b2289;gene_synonym=ECK2283;gene_synonym=genR;gene_synonym=hexA;gene_synonym=JW2284;function=regulator%3B Energy metabolism%2C carbon: Aerobic respiration;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0009060 - aerobic respiration%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=transcriptional repressor of flagellar%2C motility and chemotaxis genes;protein_id=AAC75349.1;db_xref=GI:1788626;db_xref=ASAP:ABE-0007555;db_xref=UniProtKB/Swiss-Prot:P36771;db_xref=EcoGene:EG12123 EMBL gene 2407561 2408778 . + . ID=.5000;gene=alaA;locus_tag=b2290;gene_synonym=ECK2284;gene_synonym=JW2287;gene_synonym=yfbQ;db_xref=EcoGene:EG14101 EMBL CDS 2407561 2408778 . + 0 ID=.5001;gene=alaA;locus_tag=b2290;gene_synonym=ECK2284;gene_synonym=JW2287;gene_synonym=yfbQ;ec_number=2.6.1.2;function=enzyme%3B Amino acid biosynthesis: Alanine;note=putative aminotransferase;codon_start=1;transl_table=11;product=glutamate-pyruvate aminotransferase%3B glutamic-pyruvic transaminase (GPT)%3B alanine transaminase;protein_id=AAC75350.1;db_xref=GI:1788627;db_xref=ASAP:ABE-0007560;db_xref=UniProtKB/Swiss-Prot:P0A959;db_xref=EcoGene:EG14101 EMBL repeat_region 2408792 2408810 . + . ID=.5002;note=REP167 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 2408862 2409461 . + . ID=.5003;gene=yfbR;locus_tag=b2291;gene_synonym=ECK2285;gene_synonym=JW2288;db_xref=EcoGene:EG14102 EMBL CDS 2408862 2409461 . + 0 ID=.5004;gene=yfbR;locus_tag=b2291;gene_synonym=ECK2285;gene_synonym=JW2288;function=phenotype%3B Not classified;note=putative alpha helix protein;codon_start=1;transl_table=11;product=5'-nucleotidase;protein_id=AAC75351.1;db_xref=GI:1788628;db_xref=ASAP:ABE-0007563;db_xref=UniProtKB/Swiss-Prot:P76491;db_xref=EcoGene:EG14102 EMBL repeat_region 2409496 2409514 . + . ID=.5005;note=REP168 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 2409520 2411352 . - . ID=.5006;gene=yfbS;locus_tag=b2292;gene_synonym=ECK2286;gene_synonym=JW2289;db_xref=EcoGene:EG14103 EMBL CDS 2409520 2411352 . - 0 ID=.5007;gene=yfbS;locus_tag=b2292;gene_synonym=ECK2286;gene_synonym=JW2289;function=putative transport%3B Not classified;note=putative transport protein;codon_start=1;transl_table=11;product=putative transporter;protein_id=AAC75352.1;db_xref=GI:1788629;db_xref=ASAP:ABE-0007565;db_xref=UniProtKB/Swiss-Prot:P0AFU2;db_xref=EcoGene:EG14103 EMBL gene 2411439 2412089 . - . ID=.5008;gene=yfbT;locus_tag=b2293;gene_synonym=ECK2287;gene_synonym=JW5376;db_xref=EcoGene:EG14104 EMBL CDS 2411439 2412089 . - 0 ID=.5009;gene=yfbT;locus_tag=b2293;gene_synonym=ECK2287;gene_synonym=JW5376;function=putative enzyme%3B Not classified;note=putative phosphatase;codon_start=1;transl_table=11;product=sugar phosphatas;protein_id=AAC75353.2;db_xref=GI:87082080;db_xref=ASAP:ABE-0007567;db_xref=UniProtKB/Swiss-Prot:P77625;db_xref=EcoGene:EG14104 EMBL gene 2412100 2412594 . - . ID=.5010;gene=yfbU;locus_tag=b2294;gene_synonym=ECK2288;gene_synonym=JW2291;db_xref=EcoGene:EG14105 EMBL CDS 2412100 2412594 . - 0 ID=.5011;gene=yfbU;locus_tag=b2294;gene_synonym=ECK2288;gene_synonym=JW2291;codon_start=1;transl_table=11;product=UPF0304 family protein;protein_id=AAC75354.2;db_xref=GI:87082081;db_xref=ASAP:ABE-0007571;db_xref=UniProtKB/Swiss-Prot:P0A8W8;db_xref=EcoGene:EG14105 EMBL gene 2412677 2413132 . - . ID=.5012;gene=yfbV;locus_tag=b2295;gene_synonym=ECK2289;gene_synonym=JW2292;db_xref=EcoGene:EG14106 EMBL CDS 2412677 2413132 . - 0 ID=.5013;gene=yfbV;locus_tag=b2295;gene_synonym=ECK2289;gene_synonym=JW2292;codon_start=1;transl_table=11;product=UPF0208 family inner membrane protein;protein_id=AAC75355.1;db_xref=GI:1788632;db_xref=ASAP:ABE-0007575;db_xref=UniProtKB/Swiss-Prot:P0A8D9;db_xref=EcoGene:EG14106 EMBL gene 2413470 2414672 . + . ID=.5014;gene=ackA;locus_tag=b2296;gene_synonym=ECK2290;gene_synonym=JW2293;db_xref=EcoGene:EG10027 EMBL CDS 2413470 2414672 . + 0 ID=.5015;gene=ackA;locus_tag=b2296;gene_synonym=ECK2290;gene_synonym=JW2293;ec_number=2.7.2.-;ec_number=2.7.2.1;function=enzyme%3B Energy metabolism%2C carbon: Electron transport;note=acetate kinase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0009063 - cellular amino acid catabolic process%3B GO_process: GO:0042867 - pyruvate catabolic process%3B GO_process: GO:0045733 - acetate catabolic process;codon_start=1;transl_table=11;product=acetate kinase A and propionate kinase 2;protein_id=AAC75356.1;db_xref=GI:1788633;db_xref=ASAP:ABE-0007579;db_xref=UniProtKB/Swiss-Prot:P0A6A3;db_xref=EcoGene:EG10027 EMBL gene 2414747 2416891 . + . ID=.5016;gene=pta;locus_tag=b2297;gene_synonym=ECK2291;gene_synonym=JW2294;db_xref=EcoGene:EG20173 EMBL CDS 2414747 2416891 . + 0 ID=.5017;gene=pta;locus_tag=b2297;gene_synonym=ECK2291;gene_synonym=JW2294;ec_number=2.3.1.8;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=phosphotransacetylase%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0009063 - cellular amino acid catabolic process%3B GO_process: GO:0042867 - pyruvate catabolic process%3B GO_process: GO:0045733 - acetate catabolic process;codon_start=1;transl_table=11;product=phosphate acetyltransferase;protein_id=AAC75357.1;db_xref=GI:1788635;db_xref=ASAP:ABE-0007582;db_xref=UniProtKB/Swiss-Prot:P0A9M8;db_xref=EcoGene:EG20173 EMBL gene 2417081 2418601 . + . ID=.5018;gene=yfcC;locus_tag=b2298;gene_synonym=ECK2292;gene_synonym=JW2295;db_xref=EcoGene:EG12607 EMBL CDS 2417081 2418601 . + 0 ID=.5019;gene=yfcC;locus_tag=b2298;gene_synonym=ECK2292;gene_synonym=JW2295;function=putative enzyme%3B Not classified;note=putative S-transferase%3B GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=putative inner membrane transporter%3B C4-dicarboxylate anaerobic carrier family protein;protein_id=AAC75358.2;db_xref=GI:87082082;db_xref=ASAP:ABE-0007585;db_xref=UniProtKB/Swiss-Prot:P39263;db_xref=EcoGene:EG12607 EMBL gene 2418634 2419176 . - . ID=.5020;gene=yfcD;locus_tag=b2299;gene_synonym=ECK2293;gene_synonym=JW2296;db_xref=EcoGene:EG14107 EMBL CDS 2418634 2419176 . - 0 ID=.5021;gene=yfcD;locus_tag=b2299;gene_synonym=ECK2293;gene_synonym=JW2296;function=putative regulator%3B Not classified;note=putative regulator;codon_start=1;transl_table=11;product=putative NUDIX hydrolase;protein_id=AAC75359.1;db_xref=GI:1788637;db_xref=ASAP:ABE-0007587;db_xref=UniProtKB/Swiss-Prot:P65556;db_xref=EcoGene:EG14107 EMBL gene 2419234 2419788 . - . ID=.5022;gene=yfcE;locus_tag=b2300;gene_synonym=ECK2294;gene_synonym=JW5377;db_xref=EcoGene:EG14108 EMBL CDS 2419234 2419788 . - 0 ID=.5023;gene=yfcE;locus_tag=b2300;gene_synonym=ECK2294;gene_synonym=JW5377;codon_start=1;transl_table=11;product=phosphodiesterase activity on bis-pNPP;protein_id=AAC75360.1;db_xref=GI:1788638;db_xref=ASAP:ABE-0007589;db_xref=UniProtKB/Swiss-Prot:P67095;db_xref=EcoGene:EG14108 EMBL gene 2419841 2420485 . - . ID=.5024;gene=yfcF;locus_tag=b2301;gene_synonym=ECK2295;gene_synonym=JW2298;db_xref=EcoGene:EG14109 EMBL CDS 2419841 2420485 . - 0 ID=.5025;gene=yfcF;locus_tag=b2301;gene_synonym=ECK2295;gene_synonym=JW2298;codon_start=1;transl_table=11;product=glutathione S-transferase;protein_id=AAC75361.1;db_xref=GI:1788639;db_xref=ASAP:ABE-0007593;db_xref=UniProtKB/Swiss-Prot:P77544;db_xref=EcoGene:EG14109 EMBL gene 2420621 2421268 . + . ID=.5026;gene=yfcG;locus_tag=b2302;gene_synonym=ECK2296;gene_synonym=JW2299;db_xref=EcoGene:EG14110 EMBL CDS 2420621 2421268 . + 0 ID=.5027;gene=yfcG;locus_tag=b2302;gene_synonym=ECK2296;gene_synonym=JW2299;note=putative S-transferase;codon_start=1;transl_table=11;product=GSH-dependent disulfide bond oxidoreductase;protein_id=AAC75362.1;db_xref=GI:1788640;db_xref=ASAP:ABE-0007600;db_xref=UniProtKB/Swiss-Prot:P77526;db_xref=EcoGene:EG14110 EMBL gene 2421325 2421687 . + . ID=.5028;gene=folX;locus_tag=b2303;gene_synonym=ECK2297;gene_synonym=JW2300;db_xref=EcoGene:EG14263 EMBL CDS 2421325 2421687 . + 0 ID=.5029;gene=folX;locus_tag=b2303;gene_synonym=ECK2297;gene_synonym=JW2300;ec_number=5.-.-.-;function=enzyme%3B Central intermediary metabolism: Pool%2C multipurpose conversions;note=D-erythro-7%2C8-dihydroneopterin tri P epimerase;codon_start=1;transl_table=11;product=D-erythro-7%2C8-dihydroneopterin triphosphate 2'-epimerase and dihydroneopterin aldolase;protein_id=AAC75363.1;db_xref=GI:1788641;db_xref=ASAP:ABE-0007603;db_xref=UniProtKB/Swiss-Prot:P0AC19;db_xref=EcoGene:EG14263 EMBL gene 2421708 2422601 . + . ID=.5030;gene=yfcH;locus_tag=b2304;gene_synonym=ECK2298;gene_synonym=JW2301;db_xref=EcoGene:EG14111 EMBL CDS 2421708 2422601 . + 0 ID=.5031;gene=yfcH;locus_tag=b2304;gene_synonym=ECK2298;gene_synonym=JW2301;function=putative enzyme%3B Not classified;note=putative sugar nucleotide epimerase;codon_start=1;transl_table=11;product=putative NAD-dependent nucleotide-sugar epimerase;protein_id=AAC75364.1;db_xref=GI:1788642;db_xref=ASAP:ABE-0007605;db_xref=UniProtKB/Swiss-Prot:P77775;db_xref=EcoGene:EG14111 EMBL gene 2422649 2423539 . - . ID=.5032;gene=yfcI;locus_tag=b2305;gene_synonym=ECK2299;gene_synonym=JW2302;db_xref=EcoGene:EG14112 EMBL CDS 2422649 2423539 . - 0 ID=.5033;gene=yfcI;locus_tag=b2305;gene_synonym=ECK2299;gene_synonym=JW2302;codon_start=1;transl_table=11;product=transposase_31 family protein;protein_id=AAC75365.1;db_xref=GI:1788643;db_xref=ASAP:ABE-0007607;db_xref=UniProtKB/Swiss-Prot:P77768;db_xref=EcoGene:EG14112 EMBL gene 2423736 2424509 . - . ID=.5034;gene=hisP;locus_tag=b2306;gene_synonym=ECK2300;gene_synonym=JW2303;db_xref=EcoGene:EG10452 EMBL CDS 2423736 2424509 . - 0 ID=.5035;gene=hisP;locus_tag=b2306;gene_synonym=ECK2300;gene_synonym=JW2303;function=transport%3B Transport of small molecules: Amino acids%2C amines;note=ATP-binding component of histidine transport%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009089 - lysine biosynthetic process via diaminopimelate%3B GO_process: GO:0006526 - arginine biosynthetic process%3B GO_process: GO:0000105 - histidine biosynthetic process%3B GO_process: GO:0009063 - cellular amino acid catabolic process;codon_start=1;transl_table=11;product=histidine ABC transporter ATPase;protein_id=AAC75366.1;db_xref=GI:1788644;db_xref=ASAP:ABE-0007610;db_xref=UniProtKB/Swiss-Prot:P07109;db_xref=EcoGene:EG10452 EMBL gene 2424517 2425233 . - . ID=.5036;gene=hisM;locus_tag=b2307;gene_synonym=ECK2301;gene_synonym=JW2304;db_xref=EcoGene:EG10007 EMBL CDS 2424517 2425233 . - 0 ID=.5037;gene=hisM;locus_tag=b2307;gene_synonym=ECK2301;gene_synonym=JW2304;function=transport%3B Transport of small molecules: Amino acids%2C amines;note=histidine transport%2C membrane protein M%3B membrane component of ABC superfamily%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009089 - lysine biosynthetic process via diaminopimelate%3B GO_process: GO:0006526 - arginine biosynthetic process;codon_start=1;transl_table=11;product=histidine ABC transporter permease;protein_id=AAC75367.1;db_xref=GI:1788645;db_xref=ASAP:ABE-0007613;db_xref=UniProtKB/Swiss-Prot:P0AEU3;db_xref=EcoGene:EG10007 EMBL gene 2425230 2425916 . - . ID=.5038;gene=hisQ;locus_tag=b2308;gene_synonym=ECK2302;gene_synonym=JW2305;db_xref=EcoGene:EG12125 EMBL CDS 2425230 2425916 . - 0 ID=.5039;gene=hisQ;locus_tag=b2308;gene_synonym=ECK2302;gene_synonym=JW2305;function=transport%3B Transport of small molecules: Amino acids%2C amines;note=histidine transport system permease protein%3B membrane component of ABC superfamily%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009089 - lysine biosynthetic process via diaminopimelate%3B GO_process: GO:0006526 - arginine biosynthetic process;codon_start=1;transl_table=11;product=histidine ABC transporter permease;protein_id=AAC75368.1;db_xref=GI:1788646;db_xref=ASAP:ABE-0007615;db_xref=UniProtKB/Swiss-Prot:P52094;db_xref=EcoGene:EG12125 EMBL gene 2426006 2426788 . - . ID=.5040;gene=hisJ;locus_tag=b2309;gene_synonym=ECK2303;gene_synonym=JW2306;db_xref=EcoGene:EG12124 EMBL CDS 2426006 2426788 . - 0 ID=.5041;gene=hisJ;locus_tag=b2309;gene_synonym=ECK2303;gene_synonym=JW2306;function=transport%3B Transport of small molecules: Amino acids%2C amines;note=histidine-binding periplasmic protein of high-affinity histidine transport system%3B periplasmic-binding component of ABC superfamily%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0000105 - histidine biosynthetic process;codon_start=1;transl_table=11;product=histidine ABC transporter periplasmic binding protein;protein_id=AAC75369.1;db_xref=GI:1788648;db_xref=ASAP:ABE-0007617;db_xref=UniProtKB/Swiss-Prot:P0AEU0;db_xref=EcoGene:EG12124 EMBL gene 2427009 2427791 . - . ID=.5042;gene=argT;locus_tag=b2310;gene_synonym=ECK2304;gene_synonym=JW2307;db_xref=EcoGene:EG10072 EMBL CDS 2427009 2427791 . - 0 ID=.5043;gene=argT;locus_tag=b2310;gene_synonym=ECK2304;gene_synonym=JW2307;function=transport%3B Transport of small molecules: Amino acids%2C amines;note=lysine-%2C arginine-%2C ornithine-binding periplasmic protein%3B periplasmic-binding component of ABC superfamily%3B GO_component: GO:0042597 - periplasmic space%3B GO_function: GO:0015597 - histidine/arginine/lysine/ornithine porter activity%3B GO_process: GO:0009089 - lysine biosynthetic process via diaminopimelate%3B GO_process: GO:0006526 - arginine biosynthetic process;codon_start=1;transl_table=11;product=lysine/arginine/ornithine transporter subunit;protein_id=AAC75370.1;db_xref=GI:1788649;db_xref=ASAP:ABE-0007621;db_xref=UniProtKB/Swiss-Prot:P09551;db_xref=EcoGene:EG10072 EMBL gene 2428057 2428626 . - . ID=.5044;gene=ubiX;locus_tag=b2311;gene_synonym=dedF;gene_synonym=ECK2305;gene_synonym=JW2308;db_xref=EcoGene:EG11044 EMBL CDS 2428057 2428626 . - 0 ID=.5045;gene=ubiX;locus_tag=b2311;gene_synonym=dedF;gene_synonym=ECK2305;gene_synonym=JW2308;ec_number=4.1.1.-;function=putative enzyme%3B Not classified;note=GO_process: GO:0009060 - aerobic respiration;codon_start=1;transl_table=11;product=3-octaprenyl-4-hydroxybenzoate carboxy-lyase;protein_id=AAC75371.1;db_xref=GI:1788650;db_xref=ASAP:ABE-0007628;db_xref=UniProtKB/Swiss-Prot:P0AG03;db_xref=EcoGene:EG11044 EMBL gene 2428721 2430238 . - . ID=.5046;gene=purF;locus_tag=b2312;gene_synonym=ade;gene_synonym=ECK2306;gene_synonym=JW2309;gene_synonym=purC;db_xref=EcoGene:EG10794 EMBL CDS 2428721 2430238 . - 0 ID=.5047;gene=purF;locus_tag=b2312;gene_synonym=ade;gene_synonym=ECK2306;gene_synonym=JW2309;gene_synonym=purC;ec_number=2.4.2.14;function=enzyme%3B Purine ribonucleotide biosynthesis;note=amidophosphoribosyltransferase %3D PRPP amidotransferase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006164 - purine nucleotide biosynthetic process;codon_start=1;transl_table=11;product=amidophosphoribosyltransferase;protein_id=AAC75372.1;db_xref=GI:1788651;db_xref=ASAP:ABE-0007631;db_xref=UniProtKB/Swiss-Prot:P0AG16;db_xref=EcoGene:EG10794 EMBL gene 2430275 2430763 . - . ID=.5048;gene=cvpA;locus_tag=b2313;gene_synonym=dedE;gene_synonym=ECK2307;gene_synonym=JW2310;db_xref=EcoGene:EG10169 EMBL CDS 2430275 2430763 . - 0 ID=.5049;gene=cvpA;locus_tag=b2313;gene_synonym=dedE;gene_synonym=ECK2307;gene_synonym=JW2310;function=membrane%3B Colicin-related functions;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=colicin V production protein;protein_id=AAC75373.1;db_xref=GI:1788652;db_xref=ASAP:ABE-0007633;db_xref=UniProtKB/Swiss-Prot:P08550;db_xref=EcoGene:EG10169 EMBL repeat_region 2430929 2431012 . + . ID=.5050;note=REP169 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 2431022 2431684 . - . ID=.5051;gene=dedD;locus_tag=b2314;gene_synonym=ECK2308;gene_synonym=JW5378;db_xref=EcoGene:EG10218 EMBL CDS 2431022 2431684 . - 0 ID=.5052;gene=dedD;locus_tag=b2314;gene_synonym=ECK2308;gene_synonym=JW5378;function=putative membrane%3B Not classified;note=putative lipoprotein;codon_start=1;transl_table=11;product=membrane-anchored periplasmic protein involved in septation;protein_id=AAC75374.2;db_xref=GI:87082083;db_xref=ASAP:ABE-0007643;db_xref=UniProtKB/Swiss-Prot:P09549;db_xref=EcoGene:EG10218 EMBL gene 2431674 2432942 . - . ID=.5053;gene=folC;locus_tag=b2315;gene_synonym=dedC;gene_synonym=ECK2309;gene_synonym=JW2312;db_xref=EcoGene:EG10327 EMBL CDS 2431674 2432942 . - 0 ID=.5054;gene=folC;locus_tag=b2315;gene_synonym=dedC;gene_synonym=ECK2309;gene_synonym=JW2312;ec_number=6.3.2.12;ec_number=6.3.2.17;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Folic acid;experiment=N-terminus verified by Edman degradation: PMID 3040739;note=dihydrofolate:folylpolyglutamate synthetase%3B dihydrofolate synthetase%3B GO_process: GO:0046656 - folic acid biosynthetic process;codon_start=1;transl_table=11;product=bifunctional folylpolyglutamate synthase/ dihydrofolate synthase;protein_id=AAC75375.1;db_xref=GI:1788654;db_xref=ASAP:ABE-0007645;db_xref=UniProtKB/Swiss-Prot:P08192;db_xref=EcoGene:EG10327 EMBL gene 2433012 2433926 . - . ID=.5055;gene=accD;locus_tag=b2316;gene_synonym=dedB;gene_synonym=ECK2310;gene_synonym=JW2313;gene_synonym=usg;db_xref=EcoGene:EG10217 EMBL CDS 2433012 2433926 . - 0 ID=.5056;gene=accD;locus_tag=b2316;gene_synonym=dedB;gene_synonym=ECK2310;gene_synonym=JW2313;gene_synonym=usg;ec_number=6.4.1.2;function=enzyme%3B Fatty acid and phosphatidic acid biosynthesis;note=acetylCoA carboxylase%2C carboxytransferase component%2C beta subunit%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=acetyl-CoA carboxylase%2C beta (carboxyltransferase) subunit;protein_id=AAC75376.1;db_xref=GI:1788655;db_xref=ASAP:ABE-0007648;db_xref=UniProtKB/Swiss-Prot:P0A9Q5;db_xref=EcoGene:EG10217 EMBL gene 2434082 2434741 . - . ID=.5057;gene=dedA;locus_tag=b2317;gene_synonym=ECK2311;gene_synonym=JW2314;db_xref=EcoGene:EG10216 EMBL CDS 2434082 2434741 . - 0 ID=.5058;gene=dedA;locus_tag=b2317;gene_synonym=ECK2311;gene_synonym=JW2314;note=GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=DedA family inner membrane protein;protein_id=AAC75377.1;db_xref=GI:1788656;db_xref=ASAP:ABE-0007653;db_xref=UniProtKB/Swiss-Prot:P0ABP6;db_xref=EcoGene:EG10216 EMBL gene 2434824 2435636 . - . ID=.5059;gene=truA;locus_tag=b2318;gene_synonym=asuC;gene_synonym=ECK2312;gene_synonym=hisT;gene_synonym=JW2315;gene_synonym=leuK;db_xref=EcoGene:EG10454 EMBL CDS 2434824 2435636 . - 0 ID=.5060;gene=truA;locus_tag=b2318;gene_synonym=asuC;gene_synonym=ECK2312;gene_synonym=hisT;gene_synonym=JW2315;gene_synonym=leuK;ec_number=4.2.1.70;function=enzyme%3B tRNA modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006418 - tRNA aminoacylation for protein translation;codon_start=1;transl_table=11;product=tRNA pseudouridine(38-40) synthase;protein_id=AAC75378.1;db_xref=GI:1788657;db_xref=ASAP:ABE-0007657;db_xref=UniProtKB/Swiss-Prot:P07649;db_xref=EcoGene:EG10454 EMBL gene 2435636 2436649 . - . ID=.5061;gene=usg;locus_tag=b2319;gene_synonym=ECK2313;gene_synonym=JW2316;db_xref=EcoGene:EG11059 EMBL CDS 2435636 2436649 . - 0 ID=.5062;gene=usg;locus_tag=b2319;gene_synonym=ECK2313;gene_synonym=JW2316;function=putative transport%3B Not classified;experiment=N-terminus verified by Edman degradation: PMID 2681152;note=putative PTS system enzyme II A component;codon_start=1;transl_table=11;product=putative semialdehyde dehydrogenase;protein_id=AAC75379.1;db_xref=GI:1788658;db_xref=ASAP:ABE-0007660;db_xref=UniProtKB/Swiss-Prot:P08390;db_xref=EcoGene:EG11059 EMBL gene 2436715 2437851 . - . ID=.5063;gene=pdxB;locus_tag=b2320;gene_synonym=ECK2314;gene_synonym=JW2317;db_xref=EcoGene:EG10692 EMBL CDS 2436715 2437851 . - 0 ID=.5064;gene=pdxB;locus_tag=b2320;gene_synonym=ECK2314;gene_synonym=JW2317;ec_number=1.1.1.-;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Pyridoxine;note=erythronate-4-phosphate dehyrogenase%3B GO_process: GO:0008615 - pyridoxine biosynthetic process;codon_start=1;transl_table=11;product=erythronate-4-phosphate dehydrogenase;protein_id=AAC75380.1;db_xref=GI:1788660;db_xref=ASAP:ABE-0007663;db_xref=UniProtKB/Swiss-Prot:P05459;db_xref=EcoGene:EG10692 EMBL gene 2437950 2438945 . + . ID=.5065;gene=flk;locus_tag=b2321;gene_synonym=div;gene_synonym=ECK2315;gene_synonym=JW2318;gene_synonym=rflH;db_xref=EcoGene:EG10229 EMBL CDS 2437950 2438945 . + 0 ID=.5066;gene=flk;locus_tag=b2321;gene_synonym=div;gene_synonym=ECK2315;gene_synonym=JW2318;gene_synonym=rflH;function=putative factor%3B Surface structures;note=flagellar assembly protein;codon_start=1;transl_table=11;product=putative flagella assembly protein;protein_id=AAC75381.1;db_xref=GI:1788661;db_xref=ASAP:ABE-0007667;db_xref=UniProtKB/Swiss-Prot:P15286;db_xref=EcoGene:EG10229 EMBL gene 2438942 2440120 . - . ID=.5067;gene=yfcJ;locus_tag=b2322;gene_synonym=ECK2316;gene_synonym=JW2319;db_xref=EcoGene:EG14113 EMBL CDS 2438942 2440120 . - 0 ID=.5068;gene=yfcJ;locus_tag=b2322;gene_synonym=ECK2316;gene_synonym=JW2319;function=putative transport%3B Not classified;note=putative transport protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative arabinose efflux transporter;protein_id=AAC75382.1;db_xref=GI:1788662;db_xref=ASAP:ABE-0007669;db_xref=UniProtKB/Swiss-Prot:P77549;db_xref=EcoGene:EG14113 EMBL repeat_region 2440343 2440378 . + . ID=.5069;note=REP170 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 2440385 2441605 . - . ID=.5070;gene=fabB;locus_tag=b2323;gene_synonym=ECK2317;gene_synonym=fabC;gene_synonym=JW2320;db_xref=EcoGene:EG10274 EMBL CDS 2440385 2441605 . - 0 ID=.5071;gene=fabB;locus_tag=b2323;gene_synonym=ECK2317;gene_synonym=fabC;gene_synonym=JW2320;ec_number=2.3.1.41;function=enzyme%3B Fatty acid and phosphatidic acid biosynthesis;experiment=N-terminus verified by Edman degradation: PMID 3076376;note=GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=3-oxoacyl-[acyl-carrier-protein] synthase I;protein_id=AAC75383.1;db_xref=GI:1788663;db_xref=ASAP:ABE-0007675;db_xref=UniProtKB/Swiss-Prot:P0A953;db_xref=EcoGene:EG10274 EMBL gene 2441764 2443770 . + . ID=.5072;gene=mnmC;locus_tag=b2324;gene_synonym=ECK2318;gene_synonym=JW5380;gene_synonym=trmC;gene_synonym=yfcK;db_xref=EcoGene:EG14114 EMBL CDS 2441764 2443770 . + 0 ID=.5073;gene=mnmC;locus_tag=b2324;gene_synonym=ECK2318;gene_synonym=JW5380;gene_synonym=trmC;gene_synonym=yfcK;function=enzyme%3B tRNA modification;note=putative peptidase;codon_start=1;transl_table=11;product=fused 5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase and FAD-dependent demodification enzyme;protein_id=AAC75384.2;db_xref=GI:87082084;db_xref=ASAP:ABE-0007681;db_xref=UniProtKB/Swiss-Prot:P77182;db_xref=EcoGene:EG14114 EMBL repeat_region 2443789 2443868 . + . ID=.5074;note=REP171 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 2443891 2444169 . - . ID=.5075;gene=yfcL;locus_tag=b2325;gene_synonym=ECK2319;gene_synonym=JW2322;db_xref=EcoGene:EG14115 EMBL CDS 2443891 2444169 . - 0 ID=.5076;gene=yfcL;locus_tag=b2325;gene_synonym=ECK2319;gene_synonym=JW2322;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC75385.1;db_xref=GI:1788665;db_xref=ASAP:ABE-0007684;db_xref=UniProtKB/Swiss-Prot:P64540;db_xref=EcoGene:EG14115 EMBL gene 2444203 2444751 . - . ID=.5077;gene=epmC;locus_tag=b2326;gene_synonym=ECK2320;gene_synonym=JW5381;gene_synonym=yfcM;db_xref=EcoGene:EG14116 EMBL CDS 2444203 2444751 . - 0 ID=.5078;gene=epmC;locus_tag=b2326;gene_synonym=ECK2320;gene_synonym=JW5381;gene_synonym=yfcM;function=enzyme%3B Protein modification;note=putative transporting ATPase;codon_start=1;transl_table=11;product=Elongation Factor P Lys34 hydroxylase;protein_id=AAC75386.1;db_xref=GI:1788666;db_xref=ASAP:ABE-0007686;db_xref=UniProtKB/Swiss-Prot:P76938;db_xref=EcoGene:EG14116 EMBL gene 2444751 2445560 . - . ID=.5079;gene=yfcA;locus_tag=b2327;gene_synonym=ECK2321;gene_synonym=JW2324;db_xref=EcoGene:EG11144 EMBL CDS 2444751 2445560 . - 0 ID=.5080;gene=yfcA;locus_tag=b2327;gene_synonym=ECK2321;gene_synonym=JW2324;function=putative structure%3B Not classified;note=putative structural protein;codon_start=1;transl_table=11;product=TauE/TSUP family inner membrane protein;protein_id=AAC75387.1;db_xref=GI:1788667;db_xref=ASAP:ABE-0007689;db_xref=UniProtKB/Swiss-Prot:P0AD30;db_xref=EcoGene:EG11144 EMBL gene 2445560 2446384 . - . ID=.5081;gene=mepA;locus_tag=b2328;gene_synonym=ECK2322;gene_synonym=JW2325;db_xref=EcoGene:EG10580 EMBL CDS 2445560 2446384 . - 0 ID=.5082;gene=mepA;locus_tag=b2328;gene_synonym=ECK2322;gene_synonym=JW2325;ec_number=3.4.24.-;function=enzyme%3B Murein sacculus%2C peptidoglycan;note=murein DD-endopeptidase%2C penicillin-insensitive%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_process: GO:0009252 - peptidoglycan biosynthetic process%3B GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=murein DD-endopeptidase;protein_id=AAC75388.1;db_xref=GI:1788668;db_xref=ASAP:ABE-0007691;db_xref=UniProtKB/Swiss-Prot:P0C0T5;db_xref=EcoGene:EG10580 EMBL gene 2446388 2447473 . - . ID=.5083;gene=aroC;locus_tag=b2329;gene_synonym=ECK2323;gene_synonym=JW2326;db_xref=EcoGene:EG10075 EMBL CDS 2446388 2447473 . - 0 ID=.5084;gene=aroC;locus_tag=b2329;gene_synonym=ECK2323;gene_synonym=JW2326;ec_number=4.2.3.5;function=enzyme%3B Amino acid biosynthesis: Chorismate;note=GO_process: GO:0009423 - chorismate biosynthetic process;codon_start=1;transl_table=11;product=chorismate synthase;protein_id=AAC75389.1;db_xref=GI:1788669;db_xref=ASAP:ABE-0007693;db_xref=UniProtKB/Swiss-Prot:P12008;db_xref=EcoGene:EG10075 EMBL gene 2447508 2448440 . - . ID=.5085;gene=prmB;locus_tag=b2330;gene_synonym=ECK2324;gene_synonym=JW5841;gene_synonym=yfcB;db_xref=EcoGene:EG12449 EMBL CDS 2447508 2448440 . - 0 ID=.5086;gene=prmB;locus_tag=b2330;gene_synonym=ECK2324;gene_synonym=JW5841;gene_synonym=yfcB;ec_number=2.1.1.-;function=putative enzyme%3B Not classified;note=putative adenine-specific methylase;codon_start=1;transl_table=11;product=N5-glutamine methyltransferase;protein_id=AAC75390.2;db_xref=GI:87082085;db_xref=ASAP:ABE-0007695;db_xref=UniProtKB/Swiss-Prot:P39199;db_xref=EcoGene:EG12449 EMBL gene 2448606 2449157 . + . ID=.5087;gene=smrB;locus_tag=b2331;gene_synonym=ECK2325;gene_synonym=JW2328;gene_synonym=yfcN;db_xref=EcoGene:EG14117 EMBL CDS 2448606 2449157 . + 0 ID=.5088;gene=smrB;locus_tag=b2331;gene_synonym=ECK2325;gene_synonym=JW2328;gene_synonym=yfcN;codon_start=1;transl_table=11;product=putative DNA endonuclease;protein_id=AAC75391.1;db_xref=GI:1788671;db_xref=ASAP:ABE-0007698;db_xref=UniProtKB/Swiss-Prot:P0A8B2;db_xref=EcoGene:EG14117 EMBL gene 2449228 2450049 . - . ID=.5089;gene=yfcO;locus_tag=b2332;gene_synonym=ECK2326;gene_synonym=JW2329;db_xref=EcoGene:EG14118 EMBL CDS 2449228 2450049 . - 0 ID=.5090;gene=yfcO;locus_tag=b2332;gene_synonym=ECK2326;gene_synonym=JW2329;codon_start=1;transl_table=11;product=DUF2544 family putative outer membrane protein;protein_id=AAC75392.2;db_xref=GI:87082086;db_xref=ASAP:ABE-0007700;db_xref=UniProtKB/Swiss-Prot:P76498;db_xref=EcoGene:EG14118 EMBL gene 2450051 2450590 . - . ID=.5091;gene=yfcP;locus_tag=b2333;gene_synonym=ECK2327;gene_synonym=JW2330;db_xref=EcoGene:EG14119 EMBL CDS 2450051 2450590 . - 0 ID=.5092;gene=yfcP;locus_tag=b2333;gene_synonym=ECK2327;gene_synonym=JW2330;function=putative structural component%3B Surface structures;note=putative fimbrial-like protein%3B GO_component: GO:0009289 - pilus;codon_start=1;transl_table=11;product=putative fimbrial-like adhesin protein;protein_id=AAC75393.1;db_xref=GI:1788674;db_xref=ASAP:ABE-0007702;db_xref=UniProtKB/Swiss-Prot:P76499;db_xref=EcoGene:EG14119 EMBL gene 2450587 2451075 . - . ID=.5093;gene=yfcQ;locus_tag=b2334;gene_synonym=ECK2328;gene_synonym=JW2331;db_xref=EcoGene:EG14120 EMBL CDS 2450587 2451075 . - 0 ID=.5094;gene=yfcQ;locus_tag=b2334;gene_synonym=ECK2328;gene_synonym=JW2331;function=putative structural component%3B Surface structures;note=GO_component: GO:0009289 - pilus;codon_start=1;transl_table=11;product=putative fimbrial-like adhesin protein;protein_id=AAC75394.1;db_xref=GI:1788675;db_xref=ASAP:ABE-0007705;db_xref=UniProtKB/Swiss-Prot:P76500;db_xref=EcoGene:EG14120 EMBL gene 2451072 2451584 . - . ID=.5095;gene=yfcR;locus_tag=b2335;gene_synonym=ECK2329;gene_synonym=JW2332;db_xref=EcoGene:EG14121 EMBL CDS 2451072 2451584 . - 0 ID=.5096;gene=yfcR;locus_tag=b2335;gene_synonym=ECK2329;gene_synonym=JW2332;function=putative structural component%3B Surface structures;note=putative fimbrial protein%3B GO_component: GO:0009289 - pilus;codon_start=1;transl_table=11;product=putative fimbrial-like adhesin protein;protein_id=AAC75395.1;db_xref=GI:1788676;db_xref=ASAP:ABE-0007707;db_xref=UniProtKB/Swiss-Prot:P76501;db_xref=EcoGene:EG14121 EMBL gene 2451584 2452336 . - . ID=.5097;gene=yfcS;locus_tag=b2336;gene_synonym=ECK2330;gene_synonym=JW2333;db_xref=EcoGene:EG14122 EMBL CDS 2451584 2452336 . - 0 ID=.5098;gene=yfcS;locus_tag=b2336;gene_synonym=ECK2330;gene_synonym=JW2333;function=putative factor%3B Surface structures;note=putative chaperone%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=putative periplasmic pilin chaperone;protein_id=AAC75396.1;db_xref=GI:1788677;db_xref=ASAP:ABE-0007709;db_xref=UniProtKB/Swiss-Prot:P77599;db_xref=EcoGene:EG14122 EMBL gene 2452356 2455001 . - . ID=.5099;gene=yfcU;locus_tag=b4661;gene_synonym=ECK2332;gene_synonym=JW2334;gene_synonym=yfcT;pseudo=true;db_xref=EcoGene:EG14124 EMBL CDS 2452356 2455001 . - 0 ID=.5100;gene=yfcU;locus_tag=b4661;gene_synonym=ECK2332;gene_synonym=JW2334;gene_synonym=yfcT;note=pseudogene%2C FimD fimbrial export usher family%3Bputative membrane%3B Not classified%3B putative outer membrane protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0007711;db_xref=ASAP:ABE-0007713;db_xref=UniProtKB/Swiss-Prot:P77196;db_xref=EcoGene:EG14124 EMBL gene 2455083 2455646 . - . ID=.5101;gene=yfcV;locus_tag=b2339;gene_synonym=ECK2333;gene_synonym=JW2336;db_xref=EcoGene:EG14125 EMBL CDS 2455083 2455646 . - 0 ID=.5102;gene=yfcV;locus_tag=b2339;gene_synonym=ECK2333;gene_synonym=JW2336;function=putative structural component%3B Surface structures;note=putative fimbrial-like protein%3B GO_component: GO:0009289 - pilus;codon_start=1;transl_table=11;product=putative fimbrial-like adhesin protein;protein_id=AAC75399.1;db_xref=GI:1788680;db_xref=ASAP:ABE-0007715;db_xref=UniProtKB/Swiss-Prot:P77288;db_xref=EcoGene:EG14125 EMBL gene 2456327 2456812 . - . ID=.5103;gene=sixA;locus_tag=b2340;gene_synonym=ECK2334;gene_synonym=JW2337;gene_synonym=yfcW;db_xref=EcoGene:EG14126 EMBL CDS 2456327 2456812 . - 0 ID=.5104;gene=sixA;locus_tag=b2340;gene_synonym=ECK2334;gene_synonym=JW2337;gene_synonym=yfcW;ec_number=3.1.3.-;note=GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=phosphohistidine phosphatase;protein_id=AAC75400.1;db_xref=GI:1788681;db_xref=ASAP:ABE-0007720;db_xref=UniProtKB/Swiss-Prot:P76502;db_xref=EcoGene:EG14126 EMBL gene 2457015 2459159 . - . ID=.5105;gene=fadJ;locus_tag=b2341;gene_synonym=ECK2335;gene_synonym=JW2338;gene_synonym=yfcX;db_xref=EcoGene:EG14127 EMBL CDS 2457015 2459159 . - 0 ID=.5106;gene=fadJ;locus_tag=b2341;gene_synonym=ECK2335;gene_synonym=JW2338;gene_synonym=yfcX;ec_number=1.1.1.35;ec_number=4.2.1.17;ec_number=5.1.2.3;ec_number=5.3.3.8;function=putative enzyme%3B Not classified;note=putative enzyme%3B GO_process: GO:0019395 - fatty acid oxidation;codon_start=1;transl_table=11;product=enoyl-CoA hydratase/epimerase and isomerase/3-hydroxyacyl-CoA dehydrogenase;protein_id=AAC75401.1;db_xref=GI:1788682;db_xref=ASAP:ABE-0007723;db_xref=UniProtKB/Swiss-Prot:P77399;db_xref=EcoGene:EG14127 EMBL gene 2459159 2460469 . - . ID=.5107;gene=fadI;locus_tag=b2342;gene_synonym=ECK2336;gene_synonym=JW2339;gene_synonym=yfcY;db_xref=EcoGene:EG14128 EMBL CDS 2459159 2460469 . - 0 ID=.5108;gene=fadI;locus_tag=b2342;gene_synonym=ECK2336;gene_synonym=JW2339;gene_synonym=yfcY;ec_number=2.3.1.16;function=putative enzyme%3B Not classified;note=putative acyltransferase;codon_start=1;transl_table=11;product=beta-ketoacyl-CoA thiolase%2C anaerobic%2C subunit;protein_id=AAC75402.1;db_xref=GI:1788683;db_xref=ASAP:ABE-0007725;db_xref=UniProtKB/Swiss-Prot:P76503;db_xref=EcoGene:EG14128 EMBL gene 2460650 2460934 . - . ID=.5109;gene=yfcZ;locus_tag=b2343;gene_synonym=ECK2337;gene_synonym=JW2340;db_xref=EcoGene:EG14129 EMBL CDS 2460650 2460934 . - 0 ID=.5110;gene=yfcZ;locus_tag=b2343;gene_synonym=ECK2337;gene_synonym=JW2340;codon_start=1;transl_table=11;product=UPF0381 family protein;protein_id=AAC75403.2;db_xref=GI:87082087;db_xref=ASAP:ABE-0007731;db_xref=UniProtKB/Swiss-Prot:P0AD33;db_xref=EcoGene:EG14129 EMBL gene 2461306 2462646 . + . ID=.5111;gene=fadL;locus_tag=b2344;gene_synonym=ECK2338;gene_synonym=JW2341;gene_synonym=ttr;db_xref=EcoGene:EG10280 EMBL CDS 2461306 2462646 . + 0 ID=.5112;gene=fadL;locus_tag=b2344;gene_synonym=ECK2338;gene_synonym=JW2341;gene_synonym=ttr;function=enzyme%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=long-chain fatty acid transport protein (outer membrane flp protein)%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane%3B GO_process: GO:0019395 - fatty acid oxidation;codon_start=1;transl_table=11;product=long-chain fatty acid outer membrane transporter;protein_id=AAC75404.2;db_xref=GI:145693163;db_xref=ASAP:ABE-0007740;db_xref=UniProtKB/Swiss-Prot:P10384;db_xref=EcoGene:EG10280 EMBL gene 2463012 2464070 . + . ID=.5113;gene=yfdF;locus_tag=b2345;gene_synonym=ECK2339;gene_synonym=JW2342;db_xref=EcoGene:EG14130 EMBL CDS 2463012 2464070 . + 0 ID=.5114;gene=yfdF;locus_tag=b2345;gene_synonym=ECK2339;gene_synonym=JW2342;note=GO_process: GO:0006259 - DNA metabolic process;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC75405.1;db_xref=GI:1788687;db_xref=ASAP:ABE-0007743;db_xref=UniProtKB/Swiss-Prot:P76505;db_xref=EcoGene:EG14130 EMBL gene 2464252 2465007 . - . ID=.5115;gene=mlaA;locus_tag=b2346;gene_synonym=ECK2340;gene_synonym=JW2343;gene_synonym=vacJ;db_xref=EcoGene:EG14276 EMBL CDS 2464252 2465007 . - 0 ID=.5116;gene=mlaA;locus_tag=b2346;gene_synonym=ECK2340;gene_synonym=JW2343;gene_synonym=vacJ;function=transport%3B Transport of small molecules: phospholipids%3B Macromolecule synthesis%2C modification: Lipoprotein;note=lipoprotein precursor%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=ABC transporter maintaining OM lipid asymmetry%2C OM lipoprotein component;protein_id=AAC75406.1;db_xref=GI:1788688;db_xref=ASAP:ABE-0007745;db_xref=UniProtKB/Swiss-Prot:P76506;db_xref=EcoGene:EG14276 EMBL gene 2465301 2466233 . + . ID=.5117;gene=yfdC;locus_tag=b2347;gene_synonym=ECK2341;gene_synonym=JW2344;db_xref=EcoGene:EG12420 EMBL CDS 2465301 2466233 . + 0 ID=.5118;gene=yfdC;locus_tag=b2347;gene_synonym=ECK2341;gene_synonym=JW2344;function=putative transport%3B Not classified;note=putative transport protein;codon_start=1;transl_table=11;product=putative inner membrane protein;protein_id=AAC75407.1;db_xref=GI:1788689;db_xref=ASAP:ABE-0007751;db_xref=UniProtKB/Swiss-Prot:P37327;db_xref=EcoGene:EG12420 EMBL gene 2466309 2466383 . + . ID=.5119;gene=argW;locus_tag=b2348;gene_synonym=ECK2342;gene_synonym=JWR0044;db_xref=EcoGene:EG30016 EMBL tRNA 2466309 2466383 . + . ID=.5120;gene=argW;locus_tag=b2348;gene_synonym=ECK2342;gene_synonym=JWR0044;product=tRNA-Arg;note=anticodon: CCU;db_xref=ASAP:ABE-0007753;db_xref=EcoGene:EG30016 EMBL sequence_feature 2466385 2476599 . + . ID=.5121;note=cryptic prophage CPS-53 EMBL gene 2466545 2467702 . + . ID=.5122;gene=intS;locus_tag=b2349;gene_synonym=ECK2343;gene_synonym=intC;gene_synonym=JW2345;gene_synonym=yfdB;db_xref=EcoGene:EG12413 EMBL CDS 2466545 2467702 . + 0 ID=.5123;gene=intS;locus_tag=b2349;gene_synonym=ECK2343;gene_synonym=intC;gene_synonym=JW2345;gene_synonym=yfdB;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=CPS-53 (KpLE1) prophage%3B putative prophage CPS-53 integrase;protein_id=AAC75408.1;db_xref=GI:1788690;db_xref=ASAP:ABE-0007756;db_xref=UniProtKB/Swiss-Prot:P37326;db_xref=EcoGene:EG12413 EMBL gene 2467855 2468217 . + . ID=.5124;gene=gtrA;locus_tag=b2350;gene_synonym=ECK2344;gene_synonym=JW2346;gene_synonym=yfdG;db_xref=EcoGene:EG14131 EMBL CDS 2467855 2468217 . + 0 ID=.5125;gene=gtrA;locus_tag=b2350;gene_synonym=ECK2344;gene_synonym=JW2346;gene_synonym=yfdG;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=CPS-53 (KpLE1) prophage%3B bactoprenol-linked glucose translocase/flippase;protein_id=AAC75409.1;db_xref=GI:1788691;db_xref=ASAP:ABE-0007761;db_xref=UniProtKB/Swiss-Prot:P77682;db_xref=EcoGene:EG14131 EMBL gene 2468214 2469134 . + . ID=.5126;gene=gtrB;locus_tag=b2351;gene_synonym=ECK2345;gene_synonym=JW2347;gene_synonym=yfdH;db_xref=EcoGene:EG14132 EMBL CDS 2468214 2469134 . + 0 ID=.5127;gene=gtrB;locus_tag=b2351;gene_synonym=ECK2345;gene_synonym=JW2347;gene_synonym=yfdH;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=CPS-53 (KpLE1) prophage%3B bactoprenol glucosyl transferase;protein_id=AAC75410.1;db_xref=GI:1788692;db_xref=ASAP:ABE-0007763;db_xref=UniProtKB/Swiss-Prot:P77293;db_xref=EcoGene:EG14132 EMBL gene 2469131 2470462 . + . ID=.5128;gene=gtrS;locus_tag=b2352;gene_synonym=ECK2346;gene_synonym=gtrIV;gene_synonym=JW5382;gene_synonym=yfdI;db_xref=EcoGene:EG14133 EMBL CDS 2469131 2470462 . + 0 ID=.5129;gene=gtrS;locus_tag=b2352;gene_synonym=ECK2346;gene_synonym=gtrIV;gene_synonym=JW5382;gene_synonym=yfdI;function=Phage or Prophage Related;note=putative ligase;codon_start=1;transl_table=11;product=serotype-specific glucosyl transferase%2C CPS-53 (KpLE1) prophage;protein_id=AAC75411.1;db_xref=GI:1788693;db_xref=ASAP:ABE-0007765;db_xref=UniProtKB/Swiss-Prot:P76507;db_xref=EcoGene:EG14133 EMBL gene 2470815 2471105 . + . ID=.5130;gene=tfaS;locus_tag=b2353;gene_synonym=ECK2347;gene_synonym=JW5383;gene_synonym=yfdJ;pseudo=true;db_xref=EcoGene:EG14134 EMBL CDS 2470815 2471105 . + 0 ID=.5131;gene=tfaS;locus_tag=b2353;gene_synonym=ECK2347;gene_synonym=JW5383;gene_synonym=yfdJ;note=pseudogene%2C CPS-53 (KpLE1) prophage%3B tail fiber assembly protein fragment%3BPhage or Prophage Related;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0007768;db_xref=UniProtKB/Swiss-Prot:P77326;db_xref=EcoGene:EG14134 EMBL gene 2471077 2471517 . - . ID=.5132;gene=yfdK;locus_tag=b2354;gene_synonym=ECK2348;gene_synonym=JW2350;db_xref=EcoGene:EG14135 EMBL CDS 2471077 2471517 . - 0 ID=.5133;gene=yfdK;locus_tag=b2354;gene_synonym=ECK2348;gene_synonym=JW2350;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=CPS-53 (KpLE1) prophage%3B conserved protein;protein_id=AAC75413.1;db_xref=GI:1788696;db_xref=ASAP:ABE-0007770;db_xref=UniProtKB/Swiss-Prot:P77656;db_xref=EcoGene:EG14135 EMBL gene 2471544 2472122 . - . ID=.5134;gene=yfdL;locus_tag=b2355;gene_synonym=ECK2349;gene_synonym=JW5384;pseudo=true;db_xref=EcoGene:EG14136 EMBL CDS 2471544 2472122 . - 0 ID=.5135;gene=yfdL;locus_tag=b2355;gene_synonym=ECK2349;gene_synonym=JW5384;note=pseudogene%2C CPS-53 (KpLE1) prophage%3BPhage or Prophage Related;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0007773;db_xref=UniProtKB/Swiss-Prot:P76508;db_xref=EcoGene:EG14136 EMBL gene 2472118 2472387 . - . ID=.5136;gene=yfdM;locus_tag=b2356;gene_synonym=ECK2350;gene_synonym=JW2352;gene_synonym=yzyB;pseudo=true;db_xref=EcoGene:EG12950 EMBL CDS 2472118 2472387 . - 0 ID=.5137;gene=yfdM;locus_tag=b2356;gene_synonym=ECK2350;gene_synonym=JW2352;gene_synonym=yzyB;note=CPS-53 (KpLE1) prophage%3B putative methyltransferase%3BPhage or Prophage Related;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0007775;db_xref=UniProtKB/Swiss-Prot:P76509;db_xref=EcoGene:EG12950 EMBL gene 2472387 2472881 . - . ID=.5138;gene=yfdN;locus_tag=b2357;gene_synonym=ECK2351;gene_synonym=JW5385;gene_synonym=yzyA;db_xref=EcoGene:EG12949 EMBL CDS 2472387 2472881 . - 0 ID=.5139;gene=yfdN;locus_tag=b2357;gene_synonym=ECK2351;gene_synonym=JW5385;gene_synonym=yzyA;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=CPS-53 (KpLE1) prophage%3B uncharacterized protein;protein_id=AAC75416.1;db_xref=GI:1788699;db_xref=ASAP:ABE-0007777;db_xref=UniProtKB/Swiss-Prot:P76510;db_xref=EcoGene:EG12949 EMBL gene 2472878 2473585 . - . ID=.5140;gene=oweS;locus_tag=b2358;gene_synonym=ECK2352;gene_synonym=JW2355;gene_synonym=yfdO;pseudo=true;db_xref=EcoGene:EG14137 EMBL CDS 2472878 2473585 . - 0 ID=.5141;gene=oweS;locus_tag=b2358;gene_synonym=ECK2352;gene_synonym=JW2355;gene_synonym=yfdO;note=pseudogene%2C CPS-53 (KpLE1) prophage%3B bacteriophage replication protein O family%3BPhage or Prophage Related;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0007779;db_xref=UniProtKB/Swiss-Prot:P0AD35;db_xref=EcoGene:EG14137 EMBL gene 2473604 2473966 . + . ID=.5142;gene=yfdP;locus_tag=b2359;gene_synonym=ECK2353;gene_synonym=JW2356;db_xref=EcoGene:EG14138 EMBL CDS 2473604 2473966 . + 0 ID=.5143;gene=yfdP;locus_tag=b2359;gene_synonym=ECK2353;gene_synonym=JW2356;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=CPS-53 (KpLE1) prophage%3B uncharacterized protein;protein_id=AAC75418.2;db_xref=GI:145693164;db_xref=ASAP:ABE-0007785;db_xref=UniProtKB/Swiss-Prot:P76512;db_xref=EcoGene:EG14138 EMBL gene 2474032 2474856 . + . ID=.5144;gene=yfdQ;locus_tag=b2360;gene_synonym=ECK2354;gene_synonym=JW2357;db_xref=EcoGene:EG14139 EMBL CDS 2474032 2474856 . + 0 ID=.5145;gene=yfdQ;locus_tag=b2360;gene_synonym=ECK2354;gene_synonym=JW2357;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=CPS-53 (KpLE1) prophage%3B uncharacterized protein;protein_id=AAC75419.1;db_xref=GI:1788702;db_xref=ASAP:ABE-0007788;db_xref=UniProtKB/Swiss-Prot:P76513;db_xref=EcoGene:EG14139 EMBL gene 2474984 2475520 . + . ID=.5146;gene=yfdR;locus_tag=b2361;gene_synonym=ECK2355;gene_synonym=JW2358;db_xref=EcoGene:EG14140 EMBL CDS 2474984 2475520 . + 0 ID=.5147;gene=yfdR;locus_tag=b2361;gene_synonym=ECK2355;gene_synonym=JW2358;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=CPS-53 (KpLE1) prophage%3B conserved protein;protein_id=AAC75420.2;db_xref=GI:87082090;db_xref=ASAP:ABE-0007791;db_xref=UniProtKB/Swiss-Prot:P76514;db_xref=EcoGene:EG14140 EMBL gene 2475511 2475873 . + . ID=.5148;gene=yfdS;locus_tag=b2362;gene_synonym=ECK2356;gene_synonym=JW2359;db_xref=EcoGene:EG14141 EMBL CDS 2475511 2475873 . + 0 ID=.5149;gene=yfdS;locus_tag=b2362;gene_synonym=ECK2356;gene_synonym=JW2359;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=CPS-53 (KpLE1) prophage%3B uncharacterized protein;protein_id=AAC75421.1;db_xref=GI:1788704;db_xref=ASAP:ABE-0007793;db_xref=UniProtKB/Swiss-Prot:P76515;db_xref=EcoGene:EG14141 EMBL gene 2475873 2476178 . + . ID=.5150;gene=yfdT;locus_tag=b2363;gene_synonym=ECK2357;gene_synonym=JW5887;db_xref=EcoGene:EG14142 EMBL CDS 2475873 2476178 . + 0 ID=.5151;gene=yfdT;locus_tag=b2363;gene_synonym=ECK2357;gene_synonym=JW5887;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=CPS-53 (KpLE1) prophage%3B uncharacterized protein;protein_id=AAC75422.1;db_xref=GI:1788705;db_xref=ASAP:ABE-0007795;db_xref=UniProtKB/Swiss-Prot:P76516;db_xref=EcoGene:EG14142 EMBL gene 2476181 2476231 . + . ID=.5152;gene=ypdJ;locus_tag=b4545;gene_synonym=ECK2358;gene_synonym=JW5386;pseudo=true;db_xref=EcoGene:EG14428 EMBL CDS 2476181 2476231 . + 0 ID=.5153;gene=ypdJ;locus_tag=b4545;gene_synonym=ECK2358;gene_synonym=JW5386;note=exisonase remnant;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0285066;db_xref=UniProtKB/Swiss-Prot:Q2EET0;db_xref=EcoGene:EG14428 EMBL gene 2476310 2476510 . + . ID=.5154;gene=torI;locus_tag=b4501;gene_synonym=ECK2359;gene_synonym=JW5387;db_xref=EcoGene:EG14411 EMBL CDS 2476310 2476510 . + 0 ID=.5155;gene=torI;locus_tag=b4501;gene_synonym=ECK2359;gene_synonym=JW5387;codon_start=1;transl_table=11;product=response regulator inhibitor for tor operon;protein_id=ABD18695.1;db_xref=GI:87082092;db_xref=ASAP:ABE-0269710;db_xref=UniProtKB/Swiss-Prot:Q2EES9;db_xref=EcoGene:EG14411 EMBL gene 2476584 2476598 . + . ID=.5156;gene=pawZ;locus_tag=b4643;gene_synonym=ECK4464;pseudo=true;db_xref=EcoGene:EG31173 EMBL tRNA 2476584 2476598 . + . ID=.5157;gene=pawZ;locus_tag=b4643;gene_synonym=ECK4464;product=tRNA-OTHER;pseudo=true;db_xref=EcoGene:EG31173 EMBL gene 2476694 2477629 . - . ID=.5158;gene=dsdC;locus_tag=b2364;gene_synonym=ECK2360;gene_synonym=JW2361;db_xref=EcoGene:EG13161 EMBL CDS 2476694 2477629 . - 0 ID=.5159;gene=dsdC;locus_tag=b2364;gene_synonym=ECK2360;gene_synonym=JW2361;function=regulator%3B Degradation of small molecules: Amino acids;note=D-serine dehydratase (deaminase) transcriptional activator%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0009063 - cellular amino acid catabolic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=dsd operon activator%3B autorepressor;protein_id=AAC75423.1;db_xref=GI:1788706;db_xref=ASAP:ABE-0007797;db_xref=UniProtKB/Swiss-Prot:P46068;db_xref=EcoGene:EG13161 EMBL gene 2477847 2479184 . + . ID=.5160;gene=dsdX;locus_tag=b2365;gene_synonym=dsdC;gene_synonym=ECK2361;gene_synonym=JW2362;gene_synonym=yfdA;gene_synonym=yfdD;db_xref=EcoGene:EG10250 EMBL CDS 2477847 2479184 . + 0 ID=.5161;gene=dsdX;locus_tag=b2365;gene_synonym=dsdC;gene_synonym=ECK2361;gene_synonym=JW2362;gene_synonym=yfdA;gene_synonym=yfdD;function=transport%3B Not classified;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=D-serine transporter;protein_id=AAC75424.1;db_xref=GI:1788707;db_xref=ASAP:ABE-0007801;db_xref=UniProtKB/Swiss-Prot:P08555;db_xref=EcoGene:EG10250 EMBL gene 2479202 2480530 . + . ID=.5162;gene=dsdA;locus_tag=b2366;gene_synonym=ECK2362;gene_synonym=JW2363;db_xref=EcoGene:EG10249 EMBL CDS 2479202 2480530 . + 0 ID=.5163;gene=dsdA;locus_tag=b2366;gene_synonym=ECK2362;gene_synonym=JW2363;ec_number=4.3.1.18;function=enzyme%3B Degradation of small molecules: Amino acids;experiment=N-terminus verified by Edman degradation: PMID 795658%2C9222324;note=D-serine dehydratase (deaminase)%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009063 - cellular amino acid catabolic process;codon_start=1;transl_table=11;product=D-serine dehydratase;protein_id=AAC75425.1;db_xref=GI:1788708;db_xref=ASAP:ABE-0007804;db_xref=UniProtKB/Swiss-Prot:P00926;db_xref=EcoGene:EG10249 EMBL gene 2480638 2482176 . - . ID=.5164;gene=emrY;locus_tag=b2367;gene_synonym=ECK2363;gene_synonym=JW2364;db_xref=EcoGene:EG13283 EMBL CDS 2480638 2482176 . - 0 ID=.5165;gene=emrY;locus_tag=b2367;gene_synonym=ECK2363;gene_synonym=JW2364;function=putative transport%3B Drug/analog sensitivity;note=multidrug resistance protein Y%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=putative multidrug efflux system;protein_id=AAC75426.1;db_xref=GI:1788710;db_xref=ASAP:ABE-0007806;db_xref=UniProtKB/Swiss-Prot:P52600;db_xref=EcoGene:EG13283 EMBL gene 2482176 2483339 . - . ID=.5166;gene=emrK;locus_tag=b2368;gene_synonym=ECK2364;gene_synonym=JW2365;db_xref=EcoGene:EG13282 EMBL CDS 2482176 2483339 . - 0 ID=.5167;gene=emrK;locus_tag=b2368;gene_synonym=ECK2364;gene_synonym=JW2365;function=putative transport%3B Drug/analog sensitivity;note=multidrug resistance protein K%3B GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=multidrug resistance efflux pump membrane fusion protein;protein_id=AAC75427.1;db_xref=GI:1788711;db_xref=ASAP:ABE-0007808;db_xref=UniProtKB/Swiss-Prot:P52599;db_xref=EcoGene:EG13282 EMBL gene 2483755 2484369 . + . ID=.5168;gene=evgA;locus_tag=b2369;gene_synonym=ECK2365;gene_synonym=JW2366;db_xref=EcoGene:EG11609 EMBL CDS 2483755 2484369 . + 0 ID=.5169;gene=evgA;locus_tag=b2369;gene_synonym=ECK2365;gene_synonym=JW2366;function=putative regulator%3B Not classified;note=putative positive transcription regulator (sensor EvgS)%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=response regulator in two-component regulatory system with EvgS;protein_id=AAC75428.1;db_xref=GI:1788712;db_xref=ASAP:ABE-0007817;db_xref=UniProtKB/Swiss-Prot:P0ACZ4;db_xref=EcoGene:EG11609 EMBL gene 2484374 2487967 . + . ID=.5170;gene=evgS;locus_tag=b2370;gene_synonym=ECK2366;gene_synonym=JW2367;db_xref=EcoGene:EG11610 EMBL CDS 2484374 2487967 . + 0 ID=.5171;gene=evgS;locus_tag=b2370;gene_synonym=ECK2366;gene_synonym=JW2367;function=putative regulator%3B Not classified;note=putative sensor for regulator EvgA%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=hybrid sensory histidine kinase in two-component regulatory system with EvgA;protein_id=AAC75429.1;db_xref=GI:1788713;db_xref=ASAP:ABE-0007819;db_xref=UniProtKB/Swiss-Prot:P30855;db_xref=EcoGene:EG11610 EMBL gene 2488023 2489168 . - . ID=.5172;gene=yfdE;locus_tag=b2371;gene_synonym=ECK2367;gene_synonym=JW2368;db_xref=EcoGene:EG13284 EMBL CDS 2488023 2489168 . - 0 ID=.5173;gene=yfdE;locus_tag=b2371;gene_synonym=ECK2367;gene_synonym=JW2368;function=putative enzyme%3B Not classified;note=putative enzyme;codon_start=1;transl_table=11;product=acetyl-CoA:oxalate CoA-transferase;protein_id=AAC75430.2;db_xref=GI:87082093;db_xref=ASAP:ABE-0007821;db_xref=UniProtKB/Swiss-Prot:P76518;db_xref=EcoGene:EG13284 EMBL gene 2489242 2490186 . - . ID=.5174;gene=yfdV;locus_tag=b2372;gene_synonym=ECK2368;gene_synonym=JW2369;db_xref=EcoGene:EG14144 EMBL CDS 2489242 2490186 . - 0 ID=.5175;gene=yfdV;locus_tag=b2372;gene_synonym=ECK2368;gene_synonym=JW2369;function=putative factor%3B Not classified;note=putative receptor protein;codon_start=1;transl_table=11;product=putative transporter;protein_id=AAC75431.1;db_xref=GI:1788715;db_xref=ASAP:ABE-0007824;db_xref=UniProtKB/Swiss-Prot:P0AA49;db_xref=EcoGene:EG14144 EMBL gene 2490256 2491950 . - . ID=.5176;gene=oxc;locus_tag=b2373;gene_synonym=ECK2369;gene_synonym=JW2370;gene_synonym=yfdU;db_xref=EcoGene:EG14143 EMBL CDS 2490256 2491950 . - 0 ID=.5177;gene=oxc;locus_tag=b2373;gene_synonym=ECK2369;gene_synonym=JW2370;gene_synonym=yfdU;function=enzyme%3B Oxalate catabolism;codon_start=1;transl_table=11;product=oxalyl CoA decarboxylase%2C ThDP-dependent;protein_id=AAC75432.1;db_xref=GI:1788716;db_xref=ASAP:ABE-0007826;db_xref=UniProtKB/Swiss-Prot:P0AFI0;db_xref=EcoGene:EG14143 EMBL gene 2492004 2493254 . - . ID=.5178;gene=frc;locus_tag=b2374;gene_synonym=ECK2370;gene_synonym=JW2371;gene_synonym=yfdW;db_xref=EcoGene:EG14145 EMBL CDS 2492004 2493254 . - 0 ID=.5179;gene=frc;locus_tag=b2374;gene_synonym=ECK2370;gene_synonym=JW2371;gene_synonym=yfdW;function=enzyme%3B Oxalate catabolism;note=putative enzyme;codon_start=1;transl_table=11;product=formyl-CoA transferase%2C NAD(P)-binding;protein_id=AAC75433.1;db_xref=GI:1788717;db_xref=ASAP:ABE-0007828;db_xref=UniProtKB/Swiss-Prot:P69902;db_xref=EcoGene:EG14145 EMBL gene 2493767 2494402 . - . ID=.5180;gene=yfdX;locus_tag=b2375;gene_synonym=ECK2371;gene_synonym=JW2372;db_xref=EcoGene:EG14146 EMBL CDS 2493767 2494402 . - 0 ID=.5181;gene=yfdX;locus_tag=b2375;gene_synonym=ECK2371;gene_synonym=JW2372;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC75434.1;db_xref=GI:1788719;db_xref=ASAP:ABE-0007835;db_xref=UniProtKB/Swiss-Prot:P76520;db_xref=EcoGene:EG14146 EMBL gene 2494698 2494973 . + . ID=.5182;gene=ypdI;locus_tag=b2376;gene_synonym=ECK2372;gene_synonym=JW2373;db_xref=EcoGene:EG14376 EMBL CDS 2494698 2494973 . + 0 ID=.5183;gene=ypdI;locus_tag=b2376;gene_synonym=ECK2372;gene_synonym=JW2373;codon_start=1;transl_table=11;product=putative lipoprotein involved in colanic acid biosynthesis;protein_id=AAC75435.1;db_xref=GI:2367134;db_xref=ASAP:ABE-0007839;db_xref=UniProtKB/Swiss-Prot:O32528;db_xref=EcoGene:EG14376 EMBL gene 2495050 2495292 . - . ID=.5184;gene=yfdY;locus_tag=b2377;gene_synonym=ECK2373;gene_synonym=JW2374;db_xref=EcoGene:EG14147 EMBL CDS 2495050 2495292 . - 0 ID=.5185;gene=yfdY;locus_tag=b2377;gene_synonym=ECK2373;gene_synonym=JW2374;codon_start=1;transl_table=11;product=DUF2545 family putative inner membrane protein;protein_id=AAC75436.1;db_xref=GI:1788720;db_xref=ASAP:ABE-0007841;db_xref=UniProtKB/Swiss-Prot:P76521;db_xref=EcoGene:EG14147 EMBL gene 2495645 2496565 . + . ID=.5186;gene=lpxP;locus_tag=b2378;gene_synonym=ddg;gene_synonym=ECK2374;gene_synonym=JW2375;db_xref=EcoGene:EG12901 EMBL CDS 2495645 2496565 . + 0 ID=.5187;gene=lpxP;locus_tag=b2378;gene_synonym=ddg;gene_synonym=ECK2374;gene_synonym=JW2375;function=enzyme%3B Not classified;note=putative heat shock protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0009245 - lipid A biosynthetic process%3B GO_process: GO:0009266 - response to temperature stimulus;codon_start=1;transl_table=11;product=palmitoleoyl-acyl carrier protein (ACP)-dependent acyltransferase;protein_id=AAC75437.2;db_xref=GI:87082094;db_xref=ASAP:ABE-0007848;db_xref=UniProtKB/Swiss-Prot:P0ACV2;db_xref=EcoGene:EG12901 EMBL gene 2496921 2496992 . + . ID=.5188;gene=ypdK;locus_tag=b4680;gene_synonym=ECK4495;db_xref=EcoGene:EG14485 EMBL CDS 2496921 2496992 . + 0 ID=.5189;gene=ypdK;locus_tag=b4680;gene_synonym=ECK4495;codon_start=1;transl_table=11;product=inner membrane protein;protein_id=ACO60002.1;db_xref=GI:226510962;db_xref=UniProtKB/Swiss-Prot:C1P610;db_xref=EcoGene:EG14485 EMBL gene 2497057 2498295 . - . ID=.5190;gene=alaC;locus_tag=b2379;gene_synonym=ECK2375;gene_synonym=JW2376;gene_synonym=yfdZ;db_xref=EcoGene:EG14198 EMBL CDS 2497057 2498295 . - 0 ID=.5191;gene=alaC;locus_tag=b2379;gene_synonym=ECK2375;gene_synonym=JW2376;gene_synonym=yfdZ;ec_number=2.6.1.2;function=enzyme%3B Amino acid biosynthesis: Alanine;note=putative aminotransferase;codon_start=1;transl_table=11;product=glutamate-pyruvate aminotransferase%3B glutamic-pyruvic transaminase (GPT)%3B alanine transaminase;protein_id=AAC75438.1;db_xref=GI:1788722;db_xref=ASAP:ABE-0007850;db_xref=UniProtKB/Swiss-Prot:P77434;db_xref=EcoGene:EG14198 EMBL gene 2498671 2500368 . + . ID=.5192;gene=ypdA;locus_tag=b2380;gene_synonym=ECK2376;gene_synonym=JW5388;db_xref=EcoGene:EG14148 EMBL CDS 2498671 2500368 . + 0 ID=.5193;gene=ypdA;locus_tag=b2380;gene_synonym=ECK2376;gene_synonym=JW5388;function=putative regulator%3B Not classified;note=putative sensor protein;codon_start=1;transl_table=11;product=sensor kinase regulating yhjX%3B pyruvate-responsive YpdAB two-component system;protein_id=AAC75439.1;db_xref=GI:1788723;db_xref=ASAP:ABE-0007855;db_xref=UniProtKB/Swiss-Prot:P0AA93;db_xref=EcoGene:EG14148 EMBL gene 2500383 2501117 . + . ID=.5194;gene=ypdB;locus_tag=b2381;gene_synonym=ECK2377;gene_synonym=JW2378;db_xref=EcoGene:EG14149 EMBL CDS 2500383 2501117 . + 0 ID=.5195;gene=ypdB;locus_tag=b2381;gene_synonym=ECK2377;gene_synonym=JW2378;function=putative regulator%3B Not classified;note=putative 2-component transcriptional regulator%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=response regulator activating yhjX%3B pyruvate-responsive YpdAB two-component system;protein_id=AAC75440.1;db_xref=GI:1788724;db_xref=ASAP:ABE-0007857;db_xref=UniProtKB/Swiss-Prot:P0AE39;db_xref=EcoGene:EG14149 EMBL gene 2501130 2501987 . + . ID=.5196;gene=ypdC;locus_tag=b2382;gene_synonym=ECK2378;gene_synonym=JW2379;db_xref=EcoGene:EG14150 EMBL CDS 2501130 2501987 . + 0 ID=.5197;gene=ypdC;locus_tag=b2382;gene_synonym=ECK2378;gene_synonym=JW2379;function=putative regulator%3B Not classified;note=putative ARAC-type regulatory protein%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=putative DNA-binding protein;protein_id=AAC75441.1;db_xref=GI:1788725;db_xref=ASAP:ABE-0007859;db_xref=UniProtKB/Swiss-Prot:P77396;db_xref=EcoGene:EG14150 EMBL gene 2501990 2504485 . - . ID=.5198;gene=fryA;locus_tag=b2383;gene_synonym=ECK2379;gene_synonym=JW2380;gene_synonym=ypdD;db_xref=EcoGene:EG14151 EMBL CDS 2501990 2504485 . - 0 ID=.5199;gene=fryA;locus_tag=b2383;gene_synonym=ECK2379;gene_synonym=JW2380;gene_synonym=ypdD;function=putative transport%3B Not classified;note=putative PTS system enzyme IIA component%2C enzyme I%3B GO_process: GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system;codon_start=1;transl_table=11;product=putative PTS enzyme: Hpr%2C enzyme I and IIA components;protein_id=AAC75442.1;db_xref=GI:1788726;db_xref=ASAP:ABE-0007861;db_xref=UniProtKB/Swiss-Prot:P77439;db_xref=EcoGene:EG14151 EMBL gene 2504510 2505547 . - . ID=.5200;gene=ypdE;locus_tag=b2384;gene_synonym=ECK2380;gene_synonym=JW2381;db_xref=EcoGene:EG14152 EMBL CDS 2504510 2505547 . - 0 ID=.5201;gene=ypdE;locus_tag=b2384;gene_synonym=ECK2380;gene_synonym=JW2381;codon_start=1;transl_table=11;product=aminopeptidase;protein_id=AAC75443.1;db_xref=GI:1788727;db_xref=ASAP:ABE-0007864;db_xref=UniProtKB/Swiss-Prot:P77585;db_xref=EcoGene:EG14152 EMBL gene 2505547 2506632 . - . ID=.5202;gene=ypdF;locus_tag=b2385;gene_synonym=ECK2381;gene_synonym=JW2382;db_xref=EcoGene:EG14153 EMBL CDS 2505547 2506632 . - 0 ID=.5203;gene=ypdF;locus_tag=b2385;gene_synonym=ECK2381;gene_synonym=JW2382;function=putative enzyme%3B Not classified;note=putative peptidase;codon_start=1;transl_table=11;product=Xaa-Pro aminopeptidase;protein_id=AAC75444.1;db_xref=GI:1788728;db_xref=ASAP:ABE-0007869;db_xref=UniProtKB/Swiss-Prot:P76524;db_xref=EcoGene:EG14153 EMBL gene 2506647 2507894 . - . ID=.5204;gene=fryC;locus_tag=b2386;gene_synonym=ECK2382;gene_synonym=JW2383;gene_synonym=ypdG;db_xref=EcoGene:EG14154 EMBL CDS 2506647 2507894 . - 0 ID=.5205;gene=fryC;locus_tag=b2386;gene_synonym=ECK2382;gene_synonym=JW2383;gene_synonym=ypdG;function=putative transport%3B Not classified;note=GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=putative enzyme IIC component of PTS;protein_id=AAC75445.1;db_xref=GI:1788729;db_xref=ASAP:ABE-0007871;db_xref=UniProtKB/Swiss-Prot:P77579;db_xref=EcoGene:EG14154 EMBL gene 2507916 2508242 . - . ID=.5206;gene=fryB;locus_tag=b2387;gene_synonym=ECK2383;gene_synonym=JW5389;gene_synonym=ypdH;db_xref=EcoGene:EG14155 EMBL CDS 2507916 2508242 . - 0 ID=.5207;gene=fryB;locus_tag=b2387;gene_synonym=ECK2383;gene_synonym=JW5389;gene_synonym=ypdH;function=putative transport%3B Not classified;note=putative PTS system enzyme IIB component%3B GO_process: GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system;codon_start=1;transl_table=11;product=putative enzyme IIB component of PTS;protein_id=AAC75446.1;db_xref=GI:1788730;db_xref=ASAP:ABE-0007873;db_xref=UniProtKB/Swiss-Prot:P69808;db_xref=EcoGene:EG14155 EMBL gene 2508461 2509426 . - . ID=.5208;gene=glk;locus_tag=b2388;gene_synonym=ECK2384;gene_synonym=JW2385;db_xref=EcoGene:EG12957 EMBL CDS 2508461 2509426 . - 0 ID=.5209;gene=glk;locus_tag=b2388;gene_synonym=ECK2384;gene_synonym=JW2385;ec_number=2.7.1.2;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=glucokinase;protein_id=AAC75447.1;db_xref=GI:1788732;db_xref=ASAP:ABE-0007875;db_xref=UniProtKB/Swiss-Prot:P0A6V8;db_xref=EcoGene:EG12957 EMBL gene 2509630 2510886 . + . ID=.5210;gene=yfeO;locus_tag=b2389;gene_synonym=ECK2385;gene_synonym=JW2386;db_xref=EcoGene:EG14156 EMBL CDS 2509630 2510886 . + 0 ID=.5211;gene=yfeO;locus_tag=b2389;gene_synonym=ECK2385;gene_synonym=JW2386;codon_start=1;transl_table=11;product=putative ion channel protein;protein_id=AAC75448.1;db_xref=GI:1788733;db_xref=ASAP:ABE-0007880;db_xref=UniProtKB/Swiss-Prot:P67729;db_xref=EcoGene:EG14156 EMBL gene 2511001 2511327 . + . ID=.5212;gene=ypeC;locus_tag=b2390;gene_synonym=ECK2386;gene_synonym=JW2387;db_xref=EcoGene:EG14385 EMBL CDS 2511001 2511327 . + 0 ID=.5213;gene=ypeC;locus_tag=b2390;gene_synonym=ECK2386;gene_synonym=JW2387;note=the overlapping reading frame (b2391) is no longer thought to be an actual gene%2C and has been deaccessioned;codon_start=1;transl_table=11;product=DUF2502 family putative periplasmic protein;protein_id=AAC75449.1;db_xref=GI:1788734;db_xref=ASAP:ABE-0007883;db_xref=UniProtKB/Swiss-Prot:P64542;db_xref=EcoGene:EG14385 EMBL repeat_region 2511352 2511439 . + . ID=.5214;note=REP172 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 2511468 2512706 . - . ID=.5215;gene=mntH;locus_tag=b2392;gene_synonym=ECK2387;gene_synonym=JW2388;gene_synonym=mntA;gene_synonym=yfeP;db_xref=EcoGene:EG14157 EMBL CDS 2511468 2512706 . - 0 ID=.5216;gene=mntH;locus_tag=b2392;gene_synonym=ECK2387;gene_synonym=JW2388;gene_synonym=mntA;gene_synonym=yfeP;function=putative transport%3B Not classified;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006805 - xenobiotic metabolic process;codon_start=1;transl_table=11;product=manganese/divalent cation transporter;protein_id=AAC75451.1;db_xref=GI:1788736;db_xref=ASAP:ABE-0007889;db_xref=UniProtKB/Swiss-Prot:P0A769;db_xref=EcoGene:EG14157 EMBL gene 2513042 2514244 . + . ID=.5217;gene=nupC;locus_tag=b2393;gene_synonym=cru;gene_synonym=ECK2388;gene_synonym=JW2389;db_xref=EcoGene:EG11971 EMBL CDS 2513042 2514244 . + 0 ID=.5218;gene=nupC;locus_tag=b2393;gene_synonym=cru;gene_synonym=ECK2388;gene_synonym=JW2389;function=transport%3B Transport of small molecules: Nucleosides%2C purines%2C pyrimidines;note=permease of transport system for 3 nucleosides%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion;codon_start=1;transl_table=11;product=nucleoside (except guanosine) transporter;protein_id=AAC75452.1;db_xref=GI:1788737;db_xref=ASAP:ABE-0007893;db_xref=UniProtKB/Swiss-Prot:P0AFF2;db_xref=EcoGene:EG11971 EMBL sequence_feature 2514273 2515617 . + . ID=.5219;note=*mobile_element_type: insertion sequence:IS186C EMBL gene 2514331 2515443 . + . ID=.5220;gene=insL1;locus_tag=b2394;gene_synonym=ECK0016;db_xref=EcoGene:EG40012 EMBL CDS 2514331 2515443 . + 0 ID=.5221;gene=insL1;locus_tag=b2394;gene_synonym=ECK0016;function=IS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;codon_start=1;transl_table=11;product=IS186 transposase;protein_id=AAC75453.2;db_xref=GI:87082095;db_xref=ASAP:ABE-0007897;db_xref=UniProtKB/Swiss-Prot:P0CF93;db_xref=EcoGene:EG40012 EMBL gene 2515643 2517832 . - . ID=.5222;gene=yfeA;locus_tag=b2395;gene_synonym=ECK2389;gene_synonym=JW5391;db_xref=EcoGene:EG11145 EMBL CDS 2515643 2517832 . - 0 ID=.5223;gene=yfeA;locus_tag=b2395;gene_synonym=ECK2389;gene_synonym=JW5391;codon_start=1;transl_table=11;product=putative diguanylate cyclase;protein_id=AAC75454.2;db_xref=GI:87082096;db_xref=ASAP:ABE-0007899;db_xref=UniProtKB/Swiss-Prot:P23842;db_xref=EcoGene:EG11145 EMBL gene 2518041 2518116 . - . ID=.5224;gene=alaX;locus_tag=b2396;gene_synonym=alaWbeta;gene_synonym=ECK2390;gene_synonym=JWR0046;db_xref=EcoGene:EG30012 EMBL tRNA 2518041 2518116 . - . ID=.5225;gene=alaX;locus_tag=b2396;gene_synonym=alaWbeta;gene_synonym=ECK2390;gene_synonym=JWR0046;product=tRNA-Ala;note=anticodon: GGC;db_xref=ASAP:ABE-0007902;db_xref=EcoGene:EG30012 EMBL gene 2518156 2518231 . - . ID=.5226;gene=alaW;locus_tag=b2397;gene_synonym=alaWalpha;gene_synonym=ECK2391;gene_synonym=JWR0045;db_xref=EcoGene:EG30011 EMBL tRNA 2518156 2518231 . - . ID=.5227;gene=alaW;locus_tag=b2397;gene_synonym=alaWalpha;gene_synonym=ECK2391;gene_synonym=JWR0045;product=tRNA-Ala;note=anticodon: GGC;db_xref=ASAP:ABE-0007904;db_xref=EcoGene:EG30011 EMBL gene 2518467 2518811 . + . ID=.5228;gene=yfeC;locus_tag=b2398;gene_synonym=ECK2392;gene_synonym=JW2393;db_xref=EcoGene:EG11431 EMBL CDS 2518467 2518811 . + 0 ID=.5229;gene=yfeC;locus_tag=b2398;gene_synonym=ECK2392;gene_synonym=JW2393;codon_start=1;transl_table=11;product=DUF1323 family putative DNA-binding protein;protein_id=AAC75455.2;db_xref=GI:87082097;db_xref=ASAP:ABE-0007907;db_xref=UniProtKB/Swiss-Prot:P0AD37;db_xref=EcoGene:EG11431 EMBL gene 2518813 2519205 . + . ID=.5230;gene=yfeD;locus_tag=b2399;gene_synonym=ECK2393;gene_synonym=JW2394;db_xref=EcoGene:EG11432 EMBL CDS 2518813 2519205 . + 0 ID=.5231;gene=yfeD;locus_tag=b2399;gene_synonym=ECK2393;gene_synonym=JW2394;codon_start=1;transl_table=11;product=DUF1323 family putative DNA-binding protein;protein_id=AAC75456.3;db_xref=GI:226510963;db_xref=ASAP:ABE-0007909;db_xref=UniProtKB/Swiss-Prot:P27238;db_xref=EcoGene:EG11432 EMBL gene 2519257 2520672 . - . ID=.5232;gene=gltX;locus_tag=b2400;gene_synonym=ECK2394;gene_synonym=JW2395;db_xref=EcoGene:EG10407 EMBL CDS 2519257 2520672 . - 0 ID=.5233;gene=gltX;locus_tag=b2400;gene_synonym=ECK2394;gene_synonym=JW2395;ec_number=6.1.1.17;function=enzyme%3B Aminoacyl tRNA synthetases%2C tRNA modification;note=glutamate tRNA synthetase%2C catalytic subunit%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006418 - tRNA aminoacylation for protein translation;codon_start=1;transl_table=11;product=glutamyl-tRNA synthetase;protein_id=AAC75457.1;db_xref=GI:1788743;db_xref=ASAP:ABE-0007911;db_xref=UniProtKB/Swiss-Prot:P04805;db_xref=EcoGene:EG10407 EMBL gene 2520931 2521006 . + . ID=.5234;gene=valU;locus_tag=b2401;gene_synonym=ECK2395;gene_synonym=JWR0047;gene_synonym=valUalpha;db_xref=EcoGene:EG30110 EMBL tRNA 2520931 2521006 . + . ID=.5235;gene=valU;locus_tag=b2401;gene_synonym=ECK2395;gene_synonym=JWR0047;gene_synonym=valUalpha;product=tRNA-Val;note=anticodon: UAC;db_xref=ASAP:ABE-0007914;db_xref=EcoGene:EG30110 EMBL gene 2521051 2521126 . + . ID=.5236;gene=valX;locus_tag=b2402;gene_synonym=ECK2396;gene_synonym=JWR0048;gene_synonym=valUbeta;db_xref=EcoGene:EG30113 EMBL tRNA 2521051 2521126 . + . ID=.5237;gene=valX;locus_tag=b2402;gene_synonym=ECK2396;gene_synonym=JWR0048;gene_synonym=valUbeta;product=tRNA-Val;note=anticodon: UAC;db_xref=ASAP:ABE-0007916;db_xref=EcoGene:EG30113 EMBL gene 2521173 2521248 . + . ID=.5238;gene=valY;locus_tag=b2403;gene_synonym=ECK2397;gene_synonym=JWR0049;gene_synonym=valUgamma;db_xref=EcoGene:EG30114 EMBL tRNA 2521173 2521248 . + . ID=.5239;gene=valY;locus_tag=b2403;gene_synonym=ECK2397;gene_synonym=JWR0049;gene_synonym=valUgamma;product=tRNA-Val;note=anticodon: UAC;db_xref=ASAP:ABE-0007918;db_xref=EcoGene:EG30114 EMBL gene 2521253 2521328 . + . ID=.5240;gene=lysV;locus_tag=b2404;gene_synonym=ECK2398;gene_synonym=JWR0050;gene_synonym=supN;db_xref=EcoGene:EG30056 EMBL tRNA 2521253 2521328 . + . ID=.5241;gene=lysV;locus_tag=b2404;gene_synonym=ECK2398;gene_synonym=JWR0050;gene_synonym=supN;product=tRNA-Lys;note=anticodon: UUU;db_xref=ASAP:ABE-0007920;db_xref=EcoGene:EG30056 EMBL repeat_region 2521538 2521566 . + . ID=.5242;note=REP173 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 2521593 2522477 . - . ID=.5243;gene=xapR;locus_tag=b2405;gene_synonym=ECK2399;gene_synonym=JW2396;gene_synonym=pRndR;gene_synonym=yfeB;db_xref=EcoGene:EG11146 EMBL CDS 2521593 2522477 . - 0 ID=.5244;gene=xapR;locus_tag=b2405;gene_synonym=ECK2399;gene_synonym=JW2396;gene_synonym=pRndR;gene_synonym=yfeB;function=regulator%3B Central intermediary metabolism: Nucleotide interconversions;note=regulator for xapA%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=transcriptional activator of xapAB;protein_id=AAC75458.1;db_xref=GI:2367136;db_xref=ASAP:ABE-0007922;db_xref=UniProtKB/Swiss-Prot:P23841;db_xref=EcoGene:EG11146 EMBL gene 2522729 2523985 . - . ID=.5245;gene=xapB;locus_tag=b2406;gene_synonym=ECK2400;gene_synonym=JW2397;db_xref=EcoGene:EG13159 EMBL CDS 2522729 2523985 . - 0 ID=.5246;gene=xapB;locus_tag=b2406;gene_synonym=ECK2400;gene_synonym=JW2397;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=xanthosine permease%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=xanthosine transporter;protein_id=AAC75459.1;db_xref=GI:1788745;db_xref=ASAP:ABE-0007925;db_xref=UniProtKB/Swiss-Prot:P45562;db_xref=EcoGene:EG13159 EMBL gene 2524045 2524878 . - . ID=.5247;gene=xapA;locus_tag=b2407;gene_synonym=ECK2401;gene_synonym=JW2398;gene_synonym=pndA;db_xref=EcoGene:EG20250 EMBL CDS 2524045 2524878 . - 0 ID=.5248;gene=xapA;locus_tag=b2407;gene_synonym=ECK2401;gene_synonym=JW2398;gene_synonym=pndA;ec_number=2.4.2.1;function=enzyme%3B Central intermediary metabolism: Nucleotide interconversions;note=xanthosine phosphorylase%3B GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion;codon_start=1;transl_table=11;product=purine nucleoside phosphorylase 2%3B nicotinamide 1-beta-D-riboside synthase;protein_id=AAC75460.1;db_xref=GI:1788746;db_xref=ASAP:ABE-0007927;db_xref=UniProtKB/Swiss-Prot:P45563;db_xref=EcoGene:EG20250 EMBL gene 2525127 2525891 . + . ID=.5249;gene=yfeN;locus_tag=b2408;gene_synonym=ECK2402;gene_synonym=JW2399;db_xref=EcoGene:EG13160 EMBL CDS 2525127 2525891 . + 0 ID=.5250;gene=yfeN;locus_tag=b2408;gene_synonym=ECK2402;gene_synonym=JW2399;function=putative enzyme%3B Not classified;note=putative sugar hydrolase;codon_start=1;transl_table=11;product=putative outer membrane protein;protein_id=AAC75461.1;db_xref=GI:1788747;db_xref=ASAP:ABE-0007930;db_xref=UniProtKB/Swiss-Prot:P45564;db_xref=EcoGene:EG13160 EMBL gene 2525930 2526856 . - . ID=.5251;gene=yfeR;locus_tag=b2409;gene_synonym=ECK2403;gene_synonym=JW2400;gene_synonym=osmT;db_xref=EcoGene:EG14159 EMBL CDS 2525930 2526856 . - 0 ID=.5252;gene=yfeR;locus_tag=b2409;gene_synonym=ECK2403;gene_synonym=JW2400;gene_synonym=osmT;function=putative regulator%3B Not classified;note=putative transcriptional regulator LYSR-type%3B GO_function: GO:0016563 - transcription activator activity%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=transcriptional regulator of yefH;protein_id=AAC75462.1;db_xref=GI:1788748;db_xref=ASAP:ABE-0007932;db_xref=UniProtKB/Swiss-Prot:P0ACR7;db_xref=EcoGene:EG14159 EMBL gene 2526946 2527944 . + . ID=.5253;gene=yfeH;locus_tag=b2410;gene_synonym=ECK2404;gene_synonym=JW5876;db_xref=EcoGene:EG12376 EMBL CDS 2526946 2527944 . + 0 ID=.5254;gene=yfeH;locus_tag=b2410;gene_synonym=ECK2404;gene_synonym=JW5876;function=putative enzyme%3B Not classified;note=putative cytochrome oxidase;codon_start=1;transl_table=11;product=putative inorganic ion transporter;protein_id=AAC75463.1;db_xref=GI:1788749;db_xref=ASAP:ABE-0007936;db_xref=UniProtKB/Swiss-Prot:P39836;db_xref=EcoGene:EG12376 EMBL gene 2527941 2528159 . - . ID=.5255;gene=ypeB;locus_tag=b4546;gene_synonym=ECK2405;gene_synonym=JW5877;db_xref=EcoGene:EG14366 EMBL CDS 2527941 2528159 . - 0 ID=.5256;gene=ypeB;locus_tag=b4546;gene_synonym=ECK2405;gene_synonym=JW5877;note=GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=DUF3820 family protein;protein_id=ABD18696.1;db_xref=GI:87082098;db_xref=ASAP:ABE-0285067;db_xref=UniProtKB/Swiss-Prot:P0AD40;db_xref=EcoGene:EG14366 EMBL gene 2528161 2530176 . - . ID=.5257;gene=ligA;locus_tag=b2411;gene_synonym=dnaL;gene_synonym=ECK2406;gene_synonym=JW2403;gene_synonym=lig;gene_synonym=lop;gene_synonym=pdeC;db_xref=EcoGene:EG10534 EMBL CDS 2528161 2530176 . - 0 ID=.5258;gene=ligA;locus_tag=b2411;gene_synonym=dnaL;gene_synonym=ECK2406;gene_synonym=JW2403;gene_synonym=lig;gene_synonym=lop;gene_synonym=pdeC;ec_number=6.5.1.2;function=enzyme%3B DNA - replication%2C repair%2C restriction/modification;experiment=N-terminus verified by Edman degradation: PMID 3018436;note=DNA ligase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006281 - DNA repair;codon_start=1;transl_table=11;product=DNA ligase%2C NAD(+)-dependent;protein_id=AAC75464.1;db_xref=GI:1788750;db_xref=ASAP:ABE-0007938;db_xref=UniProtKB/Swiss-Prot:P15042;db_xref=EcoGene:EG10534 EMBL gene 2530247 2531233 . - . ID=.5259;gene=zipA;locus_tag=b2412;gene_synonym=ECK2407;gene_synonym=JW2404;db_xref=EcoGene:EG14169 EMBL CDS 2530247 2531233 . - 0 ID=.5260;gene=zipA;locus_tag=b2412;gene_synonym=ECK2407;gene_synonym=JW2404;function=membrane%3B Cell division;note=cell division protein involved in FtsZ ring%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=FtsZ stabilizer;protein_id=AAC75465.1;db_xref=GI:1788752;db_xref=ASAP:ABE-0007942;db_xref=UniProtKB/Swiss-Prot:P77173;db_xref=EcoGene:EG14169 EMBL gene 2531463 2532224 . + . ID=.5261;gene=cysZ;locus_tag=b2413;gene_synonym=ECK2408;gene_synonym=JW2406;db_xref=EcoGene:EG10003 EMBL CDS 2531463 2532224 . + 0 ID=.5262;gene=cysZ;locus_tag=b2413;gene_synonym=ECK2408;gene_synonym=JW2406;function=putative transport%3B Transport of small molecules: Anions;note=required for sulfate transport%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006790 - sulfur metabolic process;codon_start=1;transl_table=11;product=sulfate transporter%2C sulfite inhibited;protein_id=AAC75466.1;db_xref=GI:1788753;db_xref=ASAP:ABE-0007953;db_xref=UniProtKB/Swiss-Prot:P0A6J3;db_xref=EcoGene:EG10003 EMBL gene 2532409 2533380 . + . ID=.5263;gene=cysK;locus_tag=b2414;gene_synonym=cysZ;gene_synonym=ECK2409;gene_synonym=JW2407;db_xref=EcoGene:EG10192 EMBL CDS 2532409 2533380 . + 0 ID=.5264;gene=cysK;locus_tag=b2414;gene_synonym=cysZ;gene_synonym=ECK2409;gene_synonym=JW2407;ec_number=2.5.1.47;function=enzyme%3B Amino acid biosynthesis: Cysteine;note=cysteine synthase A%2C O-acetylserine sulfhydrolase A%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0019344 - cysteine biosynthetic process;codon_start=1;transl_table=11;product=cysteine synthase A%2C O-acetylserine sulfhydrolase A subunit;protein_id=AAC75467.1;db_xref=GI:1788754;db_xref=ASAP:ABE-0007957;db_xref=UniProtKB/Swiss-Prot:P0ABK5;db_xref=EcoGene:EG10192 EMBL gene 2533764 2534021 . + . ID=.5265;gene=ptsH;locus_tag=b2415;gene_synonym=ctr;gene_synonym=ECK2410;gene_synonym=hpr;gene_synonym=iex?;gene_synonym=JW2408;db_xref=EcoGene:EG10788 EMBL CDS 2533764 2534021 . + 0 ID=.5266;gene=ptsH;locus_tag=b2415;gene_synonym=ctr;gene_synonym=ECK2410;gene_synonym=hpr;gene_synonym=iex?;gene_synonym=JW2408;function=enzyme%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;experiment=N-terminus verified by Edman degradation: PMID 9298646%2C9868784%2C10094700;note=PTS system protein HPr%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=phosphohistidinoprotein-hexose phosphotransferase component of PTS system (Hpr);protein_id=AAC75468.1;db_xref=GI:1788755;db_xref=ASAP:ABE-0007962;db_xref=UniProtKB/Swiss-Prot:P0AA04;db_xref=EcoGene:EG10788 EMBL gene 2534066 2535793 . + . ID=.5267;gene=ptsI;locus_tag=b2416;gene_synonym=ctr;gene_synonym=ECK2411;gene_synonym=JW2409;db_xref=EcoGene:EG10789 EMBL CDS 2534066 2535793 . + 0 ID=.5268;gene=ptsI;locus_tag=b2416;gene_synonym=ctr;gene_synonym=ECK2411;gene_synonym=JW2409;ec_number=2.7.3.9;function=enzyme%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;experiment=N-terminus verified by Edman degradation: PMID 9298646;note=PEP-protein phosphotransferase system enzyme I%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=PEP-protein phosphotransferase of PTS system (enzyme I);protein_id=AAC75469.1;db_xref=GI:1788756;db_xref=ASAP:ABE-0007967;db_xref=UniProtKB/Swiss-Prot:P08839;db_xref=EcoGene:EG10789 EMBL gene 2535834 2536343 . + . ID=.5269;gene=crr;locus_tag=b2417;gene_synonym=ECK2412;gene_synonym=gsr;gene_synonym=iex;gene_synonym=JW2410;gene_synonym=tgs;gene_synonym=treD;db_xref=EcoGene:EG10165 EMBL CDS 2535834 2536343 . + 0 ID=.5270;gene=crr;locus_tag=b2417;gene_synonym=ECK2412;gene_synonym=gsr;gene_synonym=iex;gene_synonym=JW2410;gene_synonym=tgs;gene_synonym=treD;ec_number=2.7.1.69;function=enzyme%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=PTS system%2C glucose-specific IIA component%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=glucose-specific enzyme IIA component of PTS;protein_id=AAC75470.1;db_xref=GI:1788757;db_xref=ASAP:ABE-0007971;db_xref=UniProtKB/Swiss-Prot:P69783;db_xref=EcoGene:EG10165 EMBL gene 2536386 2537237 . - . ID=.5271;gene=pdxK;locus_tag=b2418;gene_synonym=ECK2413;gene_synonym=JW2411;gene_synonym=pdxL;gene_synonym=thiJ;gene_synonym=yfeI;db_xref=EcoGene:EG12642 EMBL CDS 2536386 2537237 . - 0 ID=.5272;gene=pdxK;locus_tag=b2418;gene_synonym=ECK2413;gene_synonym=JW2411;gene_synonym=pdxL;gene_synonym=thiJ;gene_synonym=yfeI;ec_number=2.7.1.35;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Pyridoxine;note=pyridoxal/pyridoxine/pyridoxamine kinase;codon_start=1;transl_table=11;product=pyridoxal-pyridoxamine kinase/hydroxymethylpyrimidine kinase;protein_id=AAC75471.1;db_xref=GI:1788758;db_xref=ASAP:ABE-0007973;db_xref=UniProtKB/Swiss-Prot:P40191;db_xref=EcoGene:EG12642 EMBL gene 2537342 2537716 . + . ID=.5273;gene=yfeK;locus_tag=b2419;gene_synonym=ECK2414;gene_synonym=JW2412;db_xref=EcoGene:EG12644 EMBL CDS 2537342 2537716 . + 0 ID=.5274;gene=yfeK;locus_tag=b2419;gene_synonym=ECK2414;gene_synonym=JW2412;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC75472.1;db_xref=GI:1788759;db_xref=ASAP:ABE-0007977;db_xref=UniProtKB/Swiss-Prot:Q47702;db_xref=EcoGene:EG12644 EMBL gene 2537749 2538483 . + . ID=.5275;gene=yfeS;locus_tag=b2420;gene_synonym=ECK2415;gene_synonym=JW2413;db_xref=EcoGene:EG14160 EMBL CDS 2537749 2538483 . + 0 ID=.5276;gene=yfeS;locus_tag=b2420;gene_synonym=ECK2415;gene_synonym=JW2413;codon_start=1;transl_table=11;product=WGR domain protein;protein_id=AAC75473.1;db_xref=GI:1788760;db_xref=ASAP:ABE-0007979;db_xref=UniProtKB/Swiss-Prot:P78271;db_xref=EcoGene:EG14160 EMBL repeat_region 2538535 2538632 . + . ID=.5277;note=RIP174 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 2538672 2539583 . - . ID=.5278;gene=cysM;locus_tag=b2421;gene_synonym=ECK2416;gene_synonym=JW2414;db_xref=EcoGene:EG10193 EMBL CDS 2538672 2539583 . - 0 ID=.5279;gene=cysM;locus_tag=b2421;gene_synonym=ECK2416;gene_synonym=JW2414;ec_number=2.5.1.47;function=enzyme%3B Amino acid biosynthesis: Cysteine;experiment=N-terminus verified by Edman degradation: PMID 8663055;note=cysteine synthase B%2C O-acetylserine sulfhydrolase B%3B GO_process: GO:0019344 - cysteine biosynthetic process;codon_start=1;transl_table=11;product=cysteine synthase B (O-acetylserine sulfhydrolase B);protein_id=AAC75474.1;db_xref=GI:2367138;db_xref=ASAP:ABE-0007982;db_xref=UniProtKB/Swiss-Prot:P16703;db_xref=EcoGene:EG10193 EMBL repeat_region 2539607 2539642 . + . ID=.5280;note=REP175 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 2539717 2540814 . - . ID=.5281;gene=cysA;locus_tag=b2422;gene_synonym=ECK2417;gene_synonym=JW2415;db_xref=EcoGene:EG10183 EMBL CDS 2539717 2540814 . - 0 ID=.5282;gene=cysA;locus_tag=b2422;gene_synonym=ECK2417;gene_synonym=JW2415;ec_number=3.6.3.25;function=transport%3B Transport of small molecules: Anions;note=ATP-binding component of sulfate permease A protein%3B chromate resistance%3B ATP-binding component of ABC superfamily%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0015419 - sulfate transmembrane-transporting ATPase activity%3B GO_process: GO:0006790 - sulfur metabolic process%3B GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=sulfate/thiosulfate transporter subunit;protein_id=AAC75475.1;db_xref=GI:1788761;db_xref=ASAP:ABE-0007986;db_xref=UniProtKB/Swiss-Prot:P16676;db_xref=EcoGene:EG10183 EMBL gene 2540804 2541679 . - . ID=.5283;gene=cysW;locus_tag=b2423;gene_synonym=ECK2418;gene_synonym=JW2416;db_xref=EcoGene:EG10198 EMBL CDS 2540804 2541679 . - 0 ID=.5284;gene=cysW;locus_tag=b2423;gene_synonym=ECK2418;gene_synonym=JW2416;function=transport%3B Transport of small molecules: Anions;note=sulfate transport system permease W protein%3B membrane component of ABC superfamily%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006790 - sulfur metabolic process;codon_start=1;transl_table=11;product=sulfate/thiosulfate ABC transporter permease;protein_id=AAC75476.2;db_xref=GI:87082099;db_xref=ASAP:ABE-0007988;db_xref=UniProtKB/Swiss-Prot:P0AEB0;db_xref=EcoGene:EG10198 EMBL gene 2541679 2542512 . - . ID=.5285;gene=cysU;locus_tag=b2424;gene_synonym=cysT;gene_synonym=ECK2419;gene_synonym=JW2417;db_xref=EcoGene:EG10197 EMBL CDS 2541679 2542512 . - 0 ID=.5286;gene=cysU;locus_tag=b2424;gene_synonym=cysT;gene_synonym=ECK2419;gene_synonym=JW2417;function=transport%3B Transport of small molecules: Anions;note=sulfate%2C thiosulfate transport system permease T protein%3B membrane component of ABC superfamily%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006790 - sulfur metabolic process;codon_start=1;transl_table=11;product=sulfate/thiosulfate ABC transporter permease;protein_id=AAC75477.1;db_xref=GI:1788764;db_xref=ASAP:ABE-0007990;db_xref=UniProtKB/Swiss-Prot:P16701;db_xref=EcoGene:EG10197 EMBL gene 2542512 2543528 . - . ID=.5287;gene=cysP;locus_tag=b2425;gene_synonym=ECK2420;gene_synonym=JW2418;db_xref=EcoGene:EG10195 EMBL CDS 2542512 2543528 . - 0 ID=.5288;gene=cysP;locus_tag=b2425;gene_synonym=ECK2420;gene_synonym=JW2418;function=transport%3B Transport of small molecules: Anions;note=thiosulfate binding protein%3B periplasmic-binding component of ABC superfamily%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0006790 - sulfur metabolic process;codon_start=1;transl_table=11;product=thiosulfate-binding protein;protein_id=AAC75478.1;db_xref=GI:1788765;db_xref=ASAP:ABE-0007992;db_xref=UniProtKB/Swiss-Prot:P16700;db_xref=EcoGene:EG10195 EMBL gene 2543832 2544623 . - . ID=.5289;gene=ucpA;locus_tag=b2426;gene_synonym=ECK2421;gene_synonym=JW5394;gene_synonym=yfeF;db_xref=EcoGene:EG12133 EMBL CDS 2543832 2544623 . - 0 ID=.5290;gene=ucpA;locus_tag=b2426;gene_synonym=ECK2421;gene_synonym=JW5394;gene_synonym=yfeF;function=putative enzyme%3B Not classified;note=putative oxidoreductase;codon_start=1;transl_table=11;product=furfural resistance protein%2C putative short-chain oxidoreductase;protein_id=AAC75479.2;db_xref=GI:87082100;db_xref=ASAP:ABE-0007996;db_xref=UniProtKB/Swiss-Prot:P37440;db_xref=EcoGene:EG12133 EMBL gene 2544752 2545609 . - . ID=.5291;gene=murR;locus_tag=b2427;gene_synonym=ECK2422;gene_synonym=JW2420;gene_synonym=yfeT;db_xref=EcoGene:EG14161 EMBL CDS 2544752 2545609 . - 0 ID=.5292;gene=murR;locus_tag=b2427;gene_synonym=ECK2422;gene_synonym=JW2420;gene_synonym=yfeT;codon_start=1;transl_table=11;product=repressor for murPQ%2C MurNAc 6-P inducible;protein_id=AAC75480.1;db_xref=GI:1788767;db_xref=ASAP:ABE-0008000;db_xref=UniProtKB/Swiss-Prot:P77245;db_xref=EcoGene:EG14161 EMBL gene 2545773 2546669 . + . ID=.5293;gene=murQ;locus_tag=b2428;gene_synonym=ECK2423;gene_synonym=JW2421;gene_synonym=yfeU;db_xref=EcoGene:EG14162 EMBL CDS 2545773 2546669 . + 0 ID=.5294;gene=murQ;locus_tag=b2428;gene_synonym=ECK2423;gene_synonym=JW2421;gene_synonym=yfeU;function=putative regulator%3B Not classified;note=putative regulator;codon_start=1;transl_table=11;product=N-acetylmuramic acid 6-phosphate (MurNAc-6-P) etherase;protein_id=AAC75481.1;db_xref=GI:1788768;db_xref=ASAP:ABE-0008007;db_xref=UniProtKB/Swiss-Prot:P76535;db_xref=EcoGene:EG14162 EMBL gene 2546673 2548097 . + . ID=.5295;gene=murP;locus_tag=b2429;gene_synonym=ECK2424;gene_synonym=JW2422;gene_synonym=yfeV;db_xref=EcoGene:EG14163 EMBL CDS 2546673 2548097 . + 0 ID=.5296;gene=murP;locus_tag=b2429;gene_synonym=ECK2424;gene_synonym=JW2422;gene_synonym=yfeV;function=transport%3B Murein sacculus%2C peptidoglycan;note=GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=N-acetylmuramic acid permease%2C EIIBC component%2C PTS system;protein_id=AAC75482.1;db_xref=GI:1788769;db_xref=ASAP:ABE-0008009;db_xref=UniProtKB/Swiss-Prot:P77272;db_xref=EcoGene:EG14163 EMBL gene 2548102 2549406 . + . ID=.5297;gene=yfeW;locus_tag=b2430;gene_synonym=ECK2425;gene_synonym=JW5395;gene_synonym=pbp4B;db_xref=EcoGene:EG14164 EMBL CDS 2548102 2549406 . + 0 ID=.5298;gene=yfeW;locus_tag=b2430;gene_synonym=ECK2425;gene_synonym=JW5395;gene_synonym=pbp4B;function=enzyme%3B Murein sacculus%2C peptidoglycan;note=putative beta-lactamase%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=penicillin binding protein PBP4B%3B weak DD-carboxypeptidase activity;protein_id=AAC75483.2;db_xref=GI:87082101;db_xref=ASAP:ABE-0008012;db_xref=UniProtKB/Swiss-Prot:P77619;db_xref=EcoGene:EG14164 EMBL repeat_region 2549466 2549563 . + . ID=.5299;note=RIP176 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 2549646 2550545 . - . ID=.5300;gene=yfeX;locus_tag=b2431;gene_synonym=ECK2426;gene_synonym=JW2424;db_xref=EcoGene:EG14165 EMBL CDS 2549646 2550545 . - 0 ID=.5301;gene=yfeX;locus_tag=b2431;gene_synonym=ECK2426;gene_synonym=JW2424;function=enzyme%3B Transport of small molecules: Cations;codon_start=1;transl_table=11;product=porphyrinogen oxidase%2C cytoplasmic;protein_id=AAC75484.2;db_xref=GI:87082102;db_xref=ASAP:ABE-0008015;db_xref=UniProtKB/Swiss-Prot:P76536;db_xref=EcoGene:EG14165 EMBL gene 2550641 2551216 . - . ID=.5302;gene=yfeY;locus_tag=b2432;gene_synonym=ECK2427;gene_synonym=JW2425;db_xref=EcoGene:EG14166 EMBL CDS 2550641 2551216 . - 0 ID=.5303;gene=yfeY;locus_tag=b2432;gene_synonym=ECK2427;gene_synonym=JW2425;codon_start=1;transl_table=11;product=RpoE-regulated lipoprotein;protein_id=AAC75485.1;db_xref=GI:1788772;db_xref=ASAP:ABE-0008017;db_xref=UniProtKB/Swiss-Prot:P76537;db_xref=EcoGene:EG14166 EMBL gene 2551277 2551726 . - . ID=.5304;gene=yfeZ;locus_tag=b2433;gene_synonym=ECK2428;gene_synonym=JW2426;db_xref=EcoGene:EG14167 EMBL CDS 2551277 2551726 . - 0 ID=.5305;gene=yfeZ;locus_tag=b2433;gene_synonym=ECK2428;gene_synonym=JW2426;codon_start=1;transl_table=11;product=inner membrane protein;protein_id=AAC75486.2;db_xref=GI:87082103;db_xref=ASAP:ABE-0008023;db_xref=UniProtKB/Swiss-Prot:P76538;db_xref=EcoGene:EG14167 EMBL gene 2551713 2552138 . - . ID=.5306;gene=ypeA;locus_tag=b2434;gene_synonym=ECK2429;gene_synonym=JW2427;db_xref=EcoGene:EG14168 EMBL CDS 2551713 2552138 . - 0 ID=.5307;gene=ypeA;locus_tag=b2434;gene_synonym=ECK2429;gene_synonym=JW2427;codon_start=1;transl_table=11;product=GNAT family putative N-acetyltransferase;protein_id=AAC75487.2;db_xref=GI:87082104;db_xref=ASAP:ABE-0008028;db_xref=UniProtKB/Swiss-Prot:P76539;db_xref=EcoGene:EG14168 EMBL gene 2552352 2553221 . + . ID=.5308;gene=amiA;locus_tag=b2435;gene_synonym=ECK2430;gene_synonym=JW2428;gene_synonym=yfeE;db_xref=EcoGene:EG11823 EMBL CDS 2552352 2553221 . + 0 ID=.5309;gene=amiA;locus_tag=b2435;gene_synonym=ECK2430;gene_synonym=JW2428;gene_synonym=yfeE;ec_number=3.5.1.28;function=enzyme%3B Murein sacculus%2C peptidoglycan;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_process: GO:0009252 - peptidoglycan biosynthetic process;codon_start=1;transl_table=11;product=N-acetylmuramoyl-l-alanine amidase I;protein_id=AAC75488.1;db_xref=GI:1788776;db_xref=ASAP:ABE-0008032;db_xref=UniProtKB/Swiss-Prot:P36548;db_xref=EcoGene:EG11823 EMBL gene 2553225 2554124 . + . ID=.5310;gene=hemF;locus_tag=b2436;gene_synonym=ECK2431;gene_synonym=JW2429;gene_synonym=popB;gene_synonym=sec;db_xref=EcoGene:EG12189 EMBL CDS 2553225 2554124 . + 0 ID=.5311;gene=hemF;locus_tag=b2436;gene_synonym=ECK2431;gene_synonym=JW2429;gene_synonym=popB;gene_synonym=sec;ec_number=1.3.3.3;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Heme%2C porphyrin;note=GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=coproporphyrinogen III oxidase;protein_id=AAC75489.1;db_xref=GI:1788777;db_xref=ASAP:ABE-0008034;db_xref=UniProtKB/Swiss-Prot:P36553;db_xref=EcoGene:EG12189 EMBL gene 2554130 2555182 . - . ID=.5312;gene=eutR;locus_tag=b2437;gene_synonym=ECK2432;gene_synonym=JW2430;gene_synonym=yfeG;db_xref=EcoGene:EG12190 EMBL CDS 2554130 2555182 . - 0 ID=.5313;gene=eutR;locus_tag=b2437;gene_synonym=ECK2432;gene_synonym=JW2430;gene_synonym=yfeG;function=regulator%3B Not classified;note=putative ARAC-type regulatory protein%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0009310 - amine catabolic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=eut operon transcriptional activator%2C AraC family;protein_id=AAC75490.1;db_xref=GI:1788778;db_xref=ASAP:ABE-0008036;db_xref=UniProtKB/Swiss-Prot:P36547;db_xref=EcoGene:EG12190 EMBL repeat_region 2555192 2555215 . + . ID=.5314;note=REP177 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 2555228 2555728 . - . ID=.5315;gene=eutK;locus_tag=b2438;gene_synonym=ECK2433;gene_synonym=JW2431;gene_synonym=yffI;db_xref=EcoGene:EG14170 EMBL CDS 2555228 2555728 . - 0 ID=.5316;gene=eutK;locus_tag=b2438;gene_synonym=ECK2433;gene_synonym=JW2431;gene_synonym=yffI;note=GO_process: GO:0009310 - amine catabolic process;codon_start=1;transl_table=11;product=putative ethanol utilization carboxysome structural protein;protein_id=AAC75491.2;db_xref=GI:87082105;db_xref=ASAP:ABE-0008039;db_xref=UniProtKB/Swiss-Prot:P76540;db_xref=EcoGene:EG14170 EMBL gene 2555741 2556400 . - . ID=.5317;gene=eutL;locus_tag=b2439;gene_synonym=ECK2434;gene_synonym=JW2432;gene_synonym=yffJ;db_xref=EcoGene:EG14171 EMBL CDS 2555741 2556400 . - 0 ID=.5318;gene=eutL;locus_tag=b2439;gene_synonym=ECK2434;gene_synonym=JW2432;gene_synonym=yffJ;note=GO_process: GO:0009310 - amine catabolic process;codon_start=1;transl_table=11;product=putative ethanol utilization carboxysome structural protein;protein_id=AAC75492.1;db_xref=GI:1788780;db_xref=ASAP:ABE-0008041;db_xref=UniProtKB/Swiss-Prot:P76541;db_xref=EcoGene:EG14171 EMBL gene 2556410 2557297 . - . ID=.5319;gene=eutC;locus_tag=b2440;gene_synonym=ECK2435;gene_synonym=JW2433;db_xref=EcoGene:EG50007 EMBL CDS 2556410 2557297 . - 0 ID=.5320;gene=eutC;locus_tag=b2440;gene_synonym=ECK2435;gene_synonym=JW2433;ec_number=4.3.1.7;function=enzyme%3B Degradation of small molecules: Amines;experiment=N-terminus verified by Edman degradation: PMID 2197274;note=ethanolamine ammonia-lyase%2C light chain%3B GO_process: GO:0009310 - amine catabolic process;codon_start=1;transl_table=11;product=ethanolamine ammonia-lyase%2C small subunit (light chain);protein_id=AAC75493.1;db_xref=GI:1788781;db_xref=ASAP:ABE-0008043;db_xref=UniProtKB/Swiss-Prot:P19636;db_xref=EcoGene:EG50007 EMBL gene 2557318 2558679 . - . ID=.5321;gene=eutB;locus_tag=b2441;gene_synonym=ECK2436;gene_synonym=JW2434;db_xref=EcoGene:EG50006 EMBL CDS 2557318 2558679 . - 0 ID=.5322;gene=eutB;locus_tag=b2441;gene_synonym=ECK2436;gene_synonym=JW2434;ec_number=4.3.1.7;function=enzyme%3B Degradation of small molecules: Amines;experiment=N-terminus verified by Edman degradation: PMID 2197274;note=ethanolamine ammonia-lyase%2C heavy chain%3B GO_process: GO:0009310 - amine catabolic process;codon_start=1;transl_table=11;product=ethanolamine ammonia-lyase%2C large subunit%2C heavy chain;protein_id=AAC75494.2;db_xref=GI:87082106;db_xref=ASAP:ABE-0008046;db_xref=UniProtKB/Swiss-Prot:P0AEJ6;db_xref=EcoGene:EG50006 EMBL sequence_feature 2558699 2565461 . + . ID=.5323;note=cryptic prophage Eut/CPZ-55 EMBL gene 2558858 2560066 . + . ID=.5324;gene=intZ;locus_tag=b2442;gene_synonym=ECK2437;db_xref=EcoGene:EG14172 EMBL CDS 2558858 2560066 . + 0 ID=.5325;gene=intZ;locus_tag=b2442;gene_synonym=ECK2437;function=Phage or Prophage Related;note=putative prophage integrase;codon_start=1;transl_table=11;product=CPZ-55 prophage%3B putative phage integrase;protein_id=AAC75495.2;db_xref=GI:145693166;db_xref=ASAP:ABE-0008052;db_xref=UniProtKB/Swiss-Prot:P76542;db_xref=EcoGene:EG14172 EMBL gene 2560257 2560898 . + . ID=.5326;gene=yffL;locus_tag=b2443;gene_synonym=ECK2438;db_xref=EcoGene:EG14173 EMBL CDS 2560257 2560898 . + 0 ID=.5327;gene=yffL;locus_tag=b2443;gene_synonym=ECK2438;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=CPZ-55 prophage%3B uncharacterized protein;protein_id=AAC75496.1;db_xref=GI:1788784;db_xref=ASAP:ABE-0008055;db_xref=UniProtKB/Swiss-Prot:P76543;db_xref=EcoGene:EG14173 EMBL gene 2561368 2561613 . + . ID=.5328;gene=yffM;locus_tag=b2444;gene_synonym=ECK2439;db_xref=EcoGene:EG14174 EMBL CDS 2561368 2561613 . + 0 ID=.5329;gene=yffM;locus_tag=b2444;gene_synonym=ECK2439;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=CPZ-55 prophage%3B uncharacterized protein;protein_id=AAC75497.1;db_xref=GI:1788785;db_xref=ASAP:ABE-0008061;db_xref=UniProtKB/Swiss-Prot:P76544;db_xref=EcoGene:EG14174 EMBL gene 2561625 2561993 . + . ID=.5330;gene=yffN;locus_tag=b2445;gene_synonym=ECK2440;db_xref=EcoGene:EG14175 EMBL CDS 2561625 2561993 . + 0 ID=.5331;gene=yffN;locus_tag=b2445;gene_synonym=ECK2440;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=CPZ-55 prophage%3B uncharacterized protein;protein_id=AAC75498.2;db_xref=GI:145693167;db_xref=ASAP:ABE-0008063;db_xref=UniProtKB/Swiss-Prot:P76545;db_xref=EcoGene:EG14175 EMBL gene 2562111 2562527 . + . ID=.5332;gene=yffO;locus_tag=b2446;gene_synonym=ECK2441;db_xref=EcoGene:EG14176 EMBL CDS 2562111 2562527 . + 0 ID=.5333;gene=yffO;locus_tag=b2446;gene_synonym=ECK2441;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=CPZ-55 prophage%3B uncharacterized protein;protein_id=AAC75499.1;db_xref=GI:1788787;db_xref=ASAP:ABE-0008066;db_xref=UniProtKB/Swiss-Prot:P76546;db_xref=EcoGene:EG14176 EMBL gene 2562524 2563117 . + . ID=.5334;gene=yffP;locus_tag=b2447;gene_synonym=ECK2442;db_xref=EcoGene:EG14177 EMBL CDS 2562524 2563117 . + 0 ID=.5335;gene=yffP;locus_tag=b2447;gene_synonym=ECK2442;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=CPZ-55 prophage%3B uncharacterized protein;protein_id=AAC75500.1;db_xref=GI:1788788;db_xref=ASAP:ABE-0008069;db_xref=UniProtKB/Swiss-Prot:P76547;db_xref=EcoGene:EG14177 EMBL gene 2563592 2563969 . + . ID=.5336;gene=yffQ;locus_tag=b2448;gene_synonym=ECK2443;db_xref=EcoGene:EG14178 EMBL CDS 2563592 2563969 . + 0 ID=.5337;gene=yffQ;locus_tag=b2448;gene_synonym=ECK2443;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=CPZ-55 prophage%3B uncharacterized protein;protein_id=AAC75501.2;db_xref=GI:145693168;db_xref=ASAP:ABE-0008072;db_xref=UniProtKB/Swiss-Prot:P76548;db_xref=EcoGene:EG14178 EMBL gene 2563980 2564372 . + . ID=.5338;gene=yffR;locus_tag=b2449;gene_synonym=ECK2444;db_xref=EcoGene:EG14179 EMBL CDS 2563980 2564372 . + 0 ID=.5339;gene=yffR;locus_tag=b2449;gene_synonym=ECK2444;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=CPZ-55 prophage%3B uncharacterized protein;protein_id=AAC75502.1;db_xref=GI:1788791;db_xref=ASAP:ABE-0008074;db_xref=UniProtKB/Swiss-Prot:P76549;db_xref=EcoGene:EG14179 EMBL gene 2564523 2565332 . + . ID=.5340;gene=yffS;locus_tag=b2450;gene_synonym=ECK2445;db_xref=EcoGene:EG14180 EMBL CDS 2564523 2565332 . + 0 ID=.5341;gene=yffS;locus_tag=b2450;gene_synonym=ECK2445;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=CPZ-55 prophage%3B uncharacterized protein;protein_id=AAC75503.2;db_xref=GI:145693169;db_xref=ASAP:ABE-0008077;db_xref=UniProtKB/Swiss-Prot:P76550;db_xref=EcoGene:EG14180 EMBL gene 2565481 2566884 . - . ID=.5342;gene=eutA;locus_tag=b2451;gene_synonym=ECK2446;gene_synonym=JW2435;gene_synonym=yffT;db_xref=EcoGene:EG14181 EMBL CDS 2565481 2566884 . - 0 ID=.5343;gene=eutA;locus_tag=b2451;gene_synonym=ECK2446;gene_synonym=JW2435;gene_synonym=yffT;codon_start=1;transl_table=11;product=reactivating factor for ethanolamine ammonia lyase;protein_id=AAC75504.1;db_xref=GI:1788793;db_xref=ASAP:ABE-0008079;db_xref=UniProtKB/Swiss-Prot:P76551;db_xref=EcoGene:EG14181 EMBL gene 2566881 2568107 . - . ID=.5344;gene=eutH;locus_tag=b2452;gene_synonym=ECK2447;gene_synonym=JW2436;gene_synonym=yffU;db_xref=EcoGene:EG14182 EMBL CDS 2566881 2568107 . - 0 ID=.5345;gene=eutH;locus_tag=b2452;gene_synonym=ECK2447;gene_synonym=JW2436;gene_synonym=yffU;function=putative transport%3B Degradation of small molecules: Amines;note=ethanolamine utilization%3B homolog of Salmonella putative transport protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009310 - amine catabolic process;codon_start=1;transl_table=11;product=ethanolamine transporter;protein_id=AAC75505.1;db_xref=GI:1788794;db_xref=ASAP:ABE-0008081;db_xref=UniProtKB/Swiss-Prot:P76552;db_xref=EcoGene:EG14182 EMBL repeat_region 2568139 2568321 . + . ID=.5346;note=REP178 (repetitive extragenic palindromic) element%3B contains 4 REP sequences EMBL gene 2568324 2569511 . - . ID=.5347;gene=eutG;locus_tag=b2453;gene_synonym=ECK2448;gene_synonym=JW2437;gene_synonym=yffV;db_xref=EcoGene:EG14183 EMBL CDS 2568324 2569511 . - 0 ID=.5348;gene=eutG;locus_tag=b2453;gene_synonym=ECK2448;gene_synonym=JW2437;gene_synonym=yffV;function=putative enzyme%3B Degradation of small molecules: Amines;note=ethanolamine utilization%3B homolog of Salmonella enzyme%2C similar to iron-containing alcohol dehydrogenase%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_process: GO:0009310 - amine catabolic process;codon_start=1;transl_table=11;product=ethanol dehydrogenase involved in ethanolamine utilization%3B aldehyde reductase;protein_id=AAC75506.2;db_xref=GI:87082107;db_xref=ASAP:ABE-0008087;db_xref=UniProtKB/Swiss-Prot:P76553;db_xref=EcoGene:EG14183 EMBL gene 2569501 2570337 . - . ID=.5349;gene=eutJ;locus_tag=b2454;gene_synonym=ECK2449;gene_synonym=JW2438;gene_synonym=yffW;db_xref=EcoGene:EG14184 EMBL CDS 2569501 2570337 . - 0 ID=.5350;gene=eutJ;locus_tag=b2454;gene_synonym=ECK2449;gene_synonym=JW2438;gene_synonym=yffW;function=putative enzyme%3B Degradation of small molecules: Amines;note=ethanolamine utilization%3B homolog of Salmonella gene%3B GO_process: GO:0009310 - amine catabolic process%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=ethanolamine utilization protein%2C HSP70/actin superfamily protein;protein_id=AAC75507.1;db_xref=GI:1788796;db_xref=ASAP:ABE-0008089;db_xref=UniProtKB/Swiss-Prot:P77277;db_xref=EcoGene:EG14184 EMBL gene 2570348 2571751 . - . ID=.5351;gene=eutE;locus_tag=b2455;gene_synonym=ECK2450;gene_synonym=JW2439;gene_synonym=yffX;db_xref=EcoGene:EG14185 EMBL CDS 2570348 2571751 . - 0 ID=.5352;gene=eutE;locus_tag=b2455;gene_synonym=ECK2450;gene_synonym=JW2439;gene_synonym=yffX;function=putative enzyme%3B Degradation of small molecules: Amines;note=ethanolamine utilization%3B similar to acetaldehyde dehydrogenase%3B GO_process: GO:0009310 - amine catabolic process;codon_start=1;transl_table=11;product=aldehyde oxidoreductase%2C ethanolamine utilization protein;protein_id=AAC75508.1;db_xref=GI:1788797;db_xref=ASAP:ABE-0008091;db_xref=UniProtKB/Swiss-Prot:P77445;db_xref=EcoGene:EG14185 EMBL gene 2571763 2572050 . - . ID=.5353;gene=eutN;locus_tag=b2456;gene_synonym=cchB;gene_synonym=ECK2451;gene_synonym=JW2440;gene_synonym=yffY;db_xref=EcoGene:EG14186 EMBL CDS 2571763 2572050 . - 0 ID=.5354;gene=eutN;locus_tag=b2456;gene_synonym=cchB;gene_synonym=ECK2451;gene_synonym=JW2440;gene_synonym=yffY;function=phenotype%3B Not classified;note=detox protein%3B GO_process: GO:0006805 - xenobiotic metabolic process;codon_start=1;transl_table=11;product=Ethanolamine catabolic microcompartment shell protein;protein_id=AAC75509.1;db_xref=GI:1788798;db_xref=ASAP:ABE-0008093;db_xref=UniProtKB/Swiss-Prot:P0AEJ8;db_xref=EcoGene:EG14186 EMBL gene 2572157 2572450 . - . ID=.5355;gene=eutM;locus_tag=b2457;gene_synonym=cchA;gene_synonym=ECK2452;gene_synonym=JW2441;gene_synonym=yffZ;db_xref=EcoGene:EG14187 EMBL CDS 2572157 2572450 . - 0 ID=.5356;gene=eutM;locus_tag=b2457;gene_synonym=cchA;gene_synonym=ECK2452;gene_synonym=JW2441;gene_synonym=yffZ;function=phenotype%3B Not classified;note=detox protein%3B GO_process: GO:0006805 - xenobiotic metabolic process;codon_start=1;transl_table=11;product=ethanolamine utilization protein%2C putative carboxysome structural protein;protein_id=AAC75510.2;db_xref=GI:87082108;db_xref=ASAP:ABE-0008095;db_xref=UniProtKB/Swiss-Prot:P0ABF4;db_xref=EcoGene:EG14187 EMBL gene 2572489 2573505 . - . ID=.5357;gene=eutD;locus_tag=b2458;gene_synonym=ECK2453;gene_synonym=eutI;gene_synonym=JW2442;gene_synonym=ypfA;db_xref=EcoGene:EG14188 EMBL CDS 2572489 2573505 . - 0 ID=.5358;gene=eutD;locus_tag=b2458;gene_synonym=ECK2453;gene_synonym=eutI;gene_synonym=JW2442;gene_synonym=ypfA;function=putative enzyme%3B Degradation of small molecules: Amines;note=ethanolamine utilization%3B homolog of Salmonella acetyl/butyryl P transferase%3B GO_process: GO:0009310 - amine catabolic process;codon_start=1;transl_table=11;product=phosphate acetyltransferase;protein_id=AAC75511.1;db_xref=GI:1788800;db_xref=ASAP:ABE-0008097;db_xref=UniProtKB/Swiss-Prot:P77218;db_xref=EcoGene:EG14188 EMBL gene 2573502 2574305 . - . ID=.5359;gene=eutT;locus_tag=b2459;gene_synonym=ECK2454;gene_synonym=JW2443;gene_synonym=ypfB;db_xref=EcoGene:EG14189 EMBL CDS 2573502 2574305 . - 0 ID=.5360;gene=eutT;locus_tag=b2459;gene_synonym=ECK2454;gene_synonym=JW2443;gene_synonym=ypfB;note=GO_process: GO:0009310 - amine catabolic process;codon_start=1;transl_table=11;product=cobalamin adenosyltransferase involved in ethanolamine utilization;protein_id=AAC75512.1;db_xref=GI:1788801;db_xref=ASAP:ABE-0008100;db_xref=UniProtKB/Swiss-Prot:P65643;db_xref=EcoGene:EG14189 EMBL gene 2574302 2575003 . - . ID=.5361;gene=eutQ;locus_tag=b2460;gene_synonym=ECK2455;gene_synonym=JW2444;gene_synonym=ypfC;db_xref=EcoGene:EG14190 EMBL CDS 2574302 2575003 . - 0 ID=.5362;gene=eutQ;locus_tag=b2460;gene_synonym=ECK2455;gene_synonym=JW2444;gene_synonym=ypfC;function=putative enzyme%3B Not classified;note=GO_process: GO:0009310 - amine catabolic process;codon_start=1;transl_table=11;product=RmlC-like cupin domain protein;protein_id=AAC75513.1;db_xref=GI:1788802;db_xref=ASAP:ABE-0008102;db_xref=UniProtKB/Swiss-Prot:P76555;db_xref=EcoGene:EG14190 EMBL gene 2574978 2575457 . - . ID=.5363;gene=eutP;locus_tag=b2461;gene_synonym=ECK2456;gene_synonym=JW2445;gene_synonym=ypfD;db_xref=EcoGene:EG14191 EMBL CDS 2574978 2575457 . - 0 ID=.5364;gene=eutP;locus_tag=b2461;gene_synonym=ECK2456;gene_synonym=JW2445;gene_synonym=ypfD;note=GO_process: GO:0009310 - amine catabolic process;codon_start=1;transl_table=11;product=putative P-loop NTPase ethanolamine utilization protein;protein_id=AAC75514.1;db_xref=GI:1788803;db_xref=ASAP:ABE-0008105;db_xref=UniProtKB/Swiss-Prot:P76556;db_xref=EcoGene:EG14191 EMBL gene 2575470 2575805 . - . ID=.5365;gene=eutS;locus_tag=b2462;gene_synonym=ECK2457;gene_synonym=JW2446;gene_synonym=ypfE;db_xref=EcoGene:EG14192 EMBL CDS 2575470 2575805 . - 0 ID=.5366;gene=eutS;locus_tag=b2462;gene_synonym=ECK2457;gene_synonym=JW2446;gene_synonym=ypfE;note=GO_process: GO:0009310 - amine catabolic process;codon_start=1;transl_table=11;product=putative ethanol utilization carboxysome structural protein;protein_id=AAC75515.2;db_xref=GI:87082109;db_xref=ASAP:ABE-0008108;db_xref=UniProtKB/Swiss-Prot:P63746;db_xref=EcoGene:EG14192 EMBL gene 2576098 2578377 . - . ID=.5367;gene=maeB;locus_tag=b2463;gene_synonym=ECK2458;gene_synonym=JW2447;gene_synonym=ypfF;db_xref=EcoGene:EG14193 EMBL CDS 2576098 2578377 . - 0 ID=.5368;gene=maeB;locus_tag=b2463;gene_synonym=ECK2458;gene_synonym=JW2447;gene_synonym=ypfF;function=putative enzyme%3B Not classified;note=putative multimodular enzyme;codon_start=1;transl_table=11;product=malic enzyme: putative oxidoreductase/phosphotransacetylase;protein_id=AAC75516.1;db_xref=GI:1788806;db_xref=ASAP:ABE-0008111;db_xref=UniProtKB/Swiss-Prot:P76558;db_xref=EcoGene:EG14193 EMBL gene 2578666 2579616 . + . ID=.5369;gene=talA;locus_tag=b2464;gene_synonym=ECK2459;gene_synonym=JW2448;db_xref=EcoGene:EG11797 EMBL CDS 2578666 2579616 . + 0 ID=.5370;gene=talA;locus_tag=b2464;gene_synonym=ECK2459;gene_synonym=JW2448;ec_number=2.2.1.2;function=enzyme%3B Central intermediary metabolism: Non-oxidative branch%2C pentose pathway;note=GO_process: GO:0009052 - pentose-phosphate shunt%2C non-oxidative branch;codon_start=1;transl_table=11;product=transaldolase A;protein_id=AAC75517.1;db_xref=GI:1788807;db_xref=ASAP:ABE-0008115;db_xref=UniProtKB/Swiss-Prot:P0A867;db_xref=EcoGene:EG11797 EMBL gene 2579636 2581639 . + . ID=.5371;gene=tktB;locus_tag=b2465;gene_synonym=ECK2460;gene_synonym=JW2449;db_xref=EcoGene:EG12100 EMBL CDS 2579636 2581639 . + 0 ID=.5372;gene=tktB;locus_tag=b2465;gene_synonym=ECK2460;gene_synonym=JW2449;ec_number=2.2.1.1;function=enzyme%3B Central intermediary metabolism: Non-oxidative branch%2C pentose pathway;note=transketolase 2 isozyme%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0009052 - pentose-phosphate shunt%2C non-oxidative branch%3B GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion;codon_start=1;transl_table=11;product=transketolase 2%2C thiamine triphosphate-binding;protein_id=AAC75518.1;db_xref=GI:1788808;db_xref=ASAP:ABE-0008117;db_xref=UniProtKB/Swiss-Prot:P33570;db_xref=EcoGene:EG12100 EMBL repeat_region 2581648 2581716 . + . ID=.5373;note=REP179 (repetitive extragenic palindromic) element%3B contains 3 REP sequences EMBL gene 2581734 2582777 . - . ID=.5374;gene=ypfG;locus_tag=b2466;gene_synonym=ECK2461;gene_synonym=JW2450;db_xref=EcoGene:EG14194 EMBL CDS 2581734 2582777 . - 0 ID=.5375;gene=ypfG;locus_tag=b2466;gene_synonym=ECK2461;gene_synonym=JW2450;codon_start=1;transl_table=11;product=DUF1176 family protein;protein_id=AAC75519.1;db_xref=GI:1788809;db_xref=ASAP:ABE-0008120;db_xref=UniProtKB/Swiss-Prot:P76559;db_xref=EcoGene:EG14194 EMBL gene 2582903 2583478 . - . ID=.5376;gene=nudK;locus_tag=b2467;gene_synonym=ECK2462;gene_synonym=JW2451;gene_synonym=yffH;db_xref=EcoGene:EG12410 EMBL CDS 2582903 2583478 . - 0 ID=.5377;gene=nudK;locus_tag=b2467;gene_synonym=ECK2462;gene_synonym=JW2451;gene_synonym=yffH;codon_start=1;transl_table=11;product=GDP-mannose pyrophosphatase;protein_id=AAC75520.1;db_xref=GI:1788810;db_xref=ASAP:ABE-0008123;db_xref=UniProtKB/Swiss-Prot:P37128;db_xref=EcoGene:EG12410 EMBL gene 2583546 2585525 . - . ID=.5378;gene=aegA;locus_tag=b2468;gene_synonym=ECK2463;gene_synonym=JW2452;gene_synonym=yffG;db_xref=EcoGene:EG12409 EMBL CDS 2583546 2585525 . - 0 ID=.5379;gene=aegA;locus_tag=b2468;gene_synonym=ECK2463;gene_synonym=JW2452;gene_synonym=yffG;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=putative oxidoreductase%2C FeS binding subunit/NAD/FAD-binding subunit;protein_id=AAC75521.1;db_xref=GI:1788811;db_xref=ASAP:ABE-0008127;db_xref=UniProtKB/Swiss-Prot:P37127;db_xref=EcoGene:EG12409 EMBL gene 2585731 2587431 . + . ID=.5380;gene=narQ;locus_tag=b2469;gene_synonym=ECK2464;gene_synonym=JW2453;db_xref=EcoGene:EG11460 EMBL CDS 2585731 2587431 . + 0 ID=.5381;gene=narQ;locus_tag=b2469;gene_synonym=ECK2464;gene_synonym=JW2453;function=enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;note=sensor for nitrate reductase system%2C protein histidine kinase (acts on NarP and narL)%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=sensory histidine kinase in two-component regulatory system with NarP;protein_id=AAC75522.1;db_xref=GI:1788812;db_xref=ASAP:ABE-0008132;db_xref=UniProtKB/Swiss-Prot:P27896;db_xref=EcoGene:EG11460 EMBL gene 2587595 2590708 . + . ID=.5382;gene=acrD;locus_tag=b2470;gene_synonym=ECK2465;gene_synonym=JW2454;gene_synonym=yffA;db_xref=EcoGene:EG10014 EMBL CDS 2587595 2590708 . + 0 ID=.5383;gene=acrD;locus_tag=b2470;gene_synonym=ECK2465;gene_synonym=JW2454;gene_synonym=yffA;function=putative transport%3B Drug/analog sensitivity;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=aminoglycoside/multidrug efflux system;protein_id=AAC75523.1;db_xref=GI:1788814;db_xref=ASAP:ABE-0008136;db_xref=UniProtKB/Swiss-Prot:P24177;db_xref=EcoGene:EG10014 EMBL gene 2590807 2590866 . - . ID=.5384;gene=ypfM;locus_tag=b4606;gene_synonym=ECK4415;db_xref=EcoGene:EG14396 EMBL CDS 2590807 2590866 . - 0 ID=.5385;gene=ypfM;locus_tag=b4606;gene_synonym=ECK4415;codon_start=1;transl_table=11;product=stress-induced small enterobacterial protein;protein_id=ABP93450.1;db_xref=GI:145693170;db_xref=UniProtKB/Swiss-Prot:A5A621;db_xref=EcoGene:EG14396 EMBL gene 2591247 2591603 . + . ID=.5386;gene=yffB;locus_tag=b2471;gene_synonym=ECK2466;gene_synonym=JW2455;db_xref=EcoGene:EG11147 EMBL CDS 2591247 2591603 . + 0 ID=.5387;gene=yffB;locus_tag=b2471;gene_synonym=ECK2466;gene_synonym=JW2455;codon_start=1;transl_table=11;product=putative ArsC family reductase;protein_id=AAC75524.1;db_xref=GI:1788815;db_xref=ASAP:ABE-0008140;db_xref=UniProtKB/Swiss-Prot:P24178;db_xref=EcoGene:EG11147 EMBL gene 2591607 2592734 . + . ID=.5388;gene=dapE;locus_tag=b2472;gene_synonym=ECK2467;gene_synonym=JW2456;gene_synonym=msgB;db_xref=EcoGene:EG10208 EMBL CDS 2591607 2592734 . + 0 ID=.5389;gene=dapE;locus_tag=b2472;gene_synonym=ECK2467;gene_synonym=JW2456;gene_synonym=msgB;ec_number=3.5.1.18;function=enzyme%3B Amino acid biosynthesis: Lysine;note=GO_process: GO:0009089 - lysine biosynthetic process via diaminopimelate;codon_start=1;transl_table=11;product=N-succinyl-diaminopimelate deacylase;protein_id=AAC75525.1;db_xref=GI:1788816;db_xref=ASAP:ABE-0008142;db_xref=UniProtKB/Swiss-Prot:P0AED7;db_xref=EcoGene:EG10208 EMBL gene 2592762 2592962 . + . ID=.5390;gene=ypfN;locus_tag=b4547;gene_synonym=ECK2468;gene_synonym=JW2457;db_xref=EcoGene:EG14399 EMBL CDS 2592762 2592962 . + 0 ID=.5391;gene=ypfN;locus_tag=b4547;gene_synonym=ECK2468;gene_synonym=JW2457;note=GO_component: GO:0031225 - anchored to membrane;codon_start=1;transl_table=11;product=putative membrane protein%2C UPF0370 family;protein_id=ABD18697.1;db_xref=GI:87082110;db_xref=ASAP:ABE-0285068;db_xref=UniProtKB/Swiss-Prot:Q2EET2;db_xref=EcoGene:EG14399 EMBL repeat_region 2592978 2593060 . + . ID=.5392;note=REP180 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 2593072 2593770 . - . ID=.5393;gene=ypfH;locus_tag=b2473;gene_synonym=ECK2469;gene_synonym=JW5396;db_xref=EcoGene:EG14195 EMBL CDS 2593072 2593770 . - 0 ID=.5394;gene=ypfH;locus_tag=b2473;gene_synonym=ECK2469;gene_synonym=JW5396;codon_start=1;transl_table=11;product=palmitoyl-CoA esterase activity%2C uncertain physiological substrate;protein_id=AAC75526.2;db_xref=GI:87082111;db_xref=ASAP:ABE-0008145;db_xref=UniProtKB/Swiss-Prot:P76561;db_xref=EcoGene:EG14195 EMBL gene 2593844 2595859 . - . ID=.5395;gene=tmcA;locus_tag=b2474;gene_synonym=ECK2470;gene_synonym=JW2459;gene_synonym=ypfI;db_xref=EcoGene:EG14196 EMBL CDS 2593844 2595859 . - 0 ID=.5396;gene=tmcA;locus_tag=b2474;gene_synonym=ECK2470;gene_synonym=JW2459;gene_synonym=ypfI;function=enzyme%3B tRNA modification;codon_start=1;transl_table=11;product=elongator methionine tRNA (ac4C34) acetyltransferase;protein_id=AAC75527.1;db_xref=GI:1788818;db_xref=ASAP:ABE-0008150;db_xref=UniProtKB/Swiss-Prot:P76562;db_xref=EcoGene:EG14196 EMBL gene 2595874 2596737 . - . ID=.5397;gene=ypfJ;locus_tag=b2475;gene_synonym=ECK2471;gene_synonym=JW2460;db_xref=EcoGene:EG14197 EMBL CDS 2595874 2596737 . - 0 ID=.5398;gene=ypfJ;locus_tag=b2475;gene_synonym=ECK2471;gene_synonym=JW2460;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=putative neutral zinc metallopeptidase;protein_id=AAC75528.1;db_xref=GI:1788819;db_xref=ASAP:ABE-0008153;db_xref=UniProtKB/Swiss-Prot:P64429;db_xref=EcoGene:EG14197 EMBL gene 2596905 2597618 . - . ID=.5399;gene=purC;locus_tag=b2476;gene_synonym=ade;gene_synonym=ECK2472;gene_synonym=JW2461;db_xref=EcoGene:EG10791 EMBL CDS 2596905 2597618 . - 0 ID=.5400;gene=purC;locus_tag=b2476;gene_synonym=ade;gene_synonym=ECK2472;gene_synonym=JW2461;ec_number=6.3.2.6;function=enzyme%3B Purine ribonucleotide biosynthesis;experiment=N-terminus verified by Edman degradation: PMID 2120198%2C9298646;note=phosphoribosylaminoimidazole-succinocarboxamide synthetase %3D SAICAR synthetase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006164 - purine nucleotide biosynthetic process;codon_start=1;transl_table=11;product=phosphoribosylaminoimidazole-succinocarboxamide synthetase;protein_id=AAC75529.1;db_xref=GI:1788820;db_xref=ASAP:ABE-0008156;db_xref=UniProtKB/Swiss-Prot:P0A7D7;db_xref=EcoGene:EG10791 EMBL repeat_region 2597673 2597718 . + . ID=.5401;note=REP181 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 2597831 2598865 . - . ID=.5402;gene=bamC;locus_tag=b2477;gene_synonym=dapX;gene_synonym=ECK2473;gene_synonym=JW2462;gene_synonym=nlpB;db_xref=EcoGene:EG10658 EMBL CDS 2597831 2598865 . - 0 ID=.5403;gene=bamC;locus_tag=b2477;gene_synonym=dapX;gene_synonym=ECK2473;gene_synonym=JW2462;gene_synonym=nlpB;function=membrane%3B Macromolecule synthesis%2C modification: Lipoprotein;note=lipoprotein-34%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=BamABCDE complex OM biogenesis lipoprotein;protein_id=AAC75530.2;db_xref=GI:87082112;db_xref=ASAP:ABE-0008161;db_xref=UniProtKB/Swiss-Prot:P0A903;db_xref=EcoGene:EG10658 EMBL gene 2598882 2599760 . - . ID=.5404;gene=dapA;locus_tag=b2478;gene_synonym=ECK2474;gene_synonym=JW2463;db_xref=EcoGene:EG10205 EMBL CDS 2598882 2599760 . - 0 ID=.5405;gene=dapA;locus_tag=b2478;gene_synonym=ECK2474;gene_synonym=JW2463;ec_number=4.3.3.7;function=enzyme%3B Amino acid biosynthesis: Lysine;experiment=N-terminus verified by Edman degradation: PMID 9298646%2C9600841%2C9740056;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009089 - lysine biosynthetic process via diaminopimelate;codon_start=1;transl_table=11;product=dihydrodipicolinate synthase;protein_id=AAC75531.1;db_xref=GI:1788823;db_xref=ASAP:ABE-0008163;db_xref=UniProtKB/Swiss-Prot:P0A6L2;db_xref=EcoGene:EG10205 EMBL gene 2599906 2600478 . + . ID=.5406;gene=gcvR;locus_tag=b2479;gene_synonym=ECK2475;gene_synonym=JW2464;gene_synonym=yffD;db_xref=EcoGene:EG11149 EMBL CDS 2599906 2600478 . + 0 ID=.5407;gene=gcvR;locus_tag=b2479;gene_synonym=ECK2475;gene_synonym=JW2464;gene_synonym=yffD;function=regulator%3B Central intermediary metabolism: Pool%2C multipurpose conversions;note=transcriptional regulation of gcv operon%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0009063 - cellular amino acid catabolic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=transcriptional repressor%2C regulatory protein accessory to GcvA;protein_id=AAC75532.2;db_xref=GI:87082113;db_xref=ASAP:ABE-0008168;db_xref=UniProtKB/Swiss-Prot:P0A9I3;db_xref=EcoGene:EG11149 EMBL gene 2600478 2600948 . + . ID=.5408;gene=bcp;locus_tag=b2480;gene_synonym=ECK2476;gene_synonym=JW2465;db_xref=EcoGene:EG10108 EMBL CDS 2600478 2600948 . + 0 ID=.5409;gene=bcp;locus_tag=b2480;gene_synonym=ECK2476;gene_synonym=JW2465;ec_number=1.11.1.-;ec_number=1.11.1.7;function=phenotype%3B Not classified;experiment=N-terminus verified by Edman degradation: PMID 9298646%2C9740056;note=bacterioferritin comigratory protein%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006805 - xenobiotic metabolic process;codon_start=1;transl_table=11;product=peroxiredoxin%3B thiol peroxidase%2C thioredoxin-dependent;protein_id=AAC75533.1;db_xref=GI:1788825;db_xref=ASAP:ABE-0008171;db_xref=UniProtKB/Swiss-Prot:P0AE52;db_xref=EcoGene:EG10108 EMBL gene 2601201 2601818 . + . ID=.5410;gene=hyfA;locus_tag=b2481;gene_synonym=ECK2477;gene_synonym=JW2466;gene_synonym=yffE;db_xref=EcoGene:EG11150 EMBL CDS 2601201 2601818 . + 0 ID=.5411;gene=hyfA;locus_tag=b2481;gene_synonym=ECK2477;gene_synonym=JW2466;gene_synonym=yffE;ec_number=1.-.-.-;function=enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;note=hydrogenase 4 Fe-S subunit%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=hydrogenase 4%2C 4Fe-4S subunit;protein_id=AAC75534.2;db_xref=GI:87082114;db_xref=ASAP:ABE-0008179;db_xref=UniProtKB/Swiss-Prot:P23481;db_xref=EcoGene:EG11150 EMBL gene 2601818 2603836 . + . ID=.5412;gene=hyfB;locus_tag=b2482;gene_synonym=ECK2478;gene_synonym=JW2467;gene_synonym=yffF;db_xref=EcoGene:EG11282 EMBL CDS 2601818 2603836 . + 0 ID=.5413;gene=hyfB;locus_tag=b2482;gene_synonym=ECK2478;gene_synonym=JW2467;gene_synonym=yffF;function=enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;note=hydrogenase 4 membrane subunit%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=hydrogenase 4%2C membrane subunit;protein_id=AAC75535.1;db_xref=GI:1788827;db_xref=ASAP:ABE-0008181;db_xref=UniProtKB/Swiss-Prot:P23482;db_xref=EcoGene:EG11282 EMBL gene 2603847 2604794 . + . ID=.5414;gene=hyfC;locus_tag=b2483;gene_synonym=ECK2479;gene_synonym=JW2468;db_xref=EcoGene:EG14211 EMBL CDS 2603847 2604794 . + 0 ID=.5415;gene=hyfC;locus_tag=b2483;gene_synonym=ECK2479;gene_synonym=JW2468;function=enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;note=hydrogenase 4 membrane subunit%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=hydrogenase 4%2C membrane subunit;protein_id=AAC75536.2;db_xref=GI:87082115;db_xref=ASAP:ABE-0008183;db_xref=UniProtKB/Swiss-Prot:P77858;db_xref=EcoGene:EG14211 EMBL gene 2604811 2606250 . + . ID=.5416;gene=hyfD;locus_tag=b2484;gene_synonym=ECK2480;gene_synonym=JW2469;db_xref=EcoGene:EG14212 EMBL CDS 2604811 2606250 . + 0 ID=.5417;gene=hyfD;locus_tag=b2484;gene_synonym=ECK2480;gene_synonym=JW2469;function=enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;note=hydrogenase 4 membrane subunit%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=hydrogenase 4%2C membrane subunit;protein_id=AAC75537.1;db_xref=GI:1788829;db_xref=ASAP:ABE-0008185;db_xref=UniProtKB/Swiss-Prot:P77416;db_xref=EcoGene:EG14212 EMBL gene 2606262 2606912 . + . ID=.5418;gene=hyfE;locus_tag=b2485;gene_synonym=ECK2481;gene_synonym=JW2470;db_xref=EcoGene:EG14213 EMBL CDS 2606262 2606912 . + 0 ID=.5419;gene=hyfE;locus_tag=b2485;gene_synonym=ECK2481;gene_synonym=JW2470;function=enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;note=hydrogenase 4 membrane subunit%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=hydrogenase 4%2C membrane subunit;protein_id=AAC75538.1;db_xref=GI:1788830;db_xref=ASAP:ABE-0008188;db_xref=UniProtKB/Swiss-Prot:P0AEW1;db_xref=EcoGene:EG14213 EMBL gene 2606917 2608497 . + . ID=.5420;gene=hyfF;locus_tag=b2486;gene_synonym=ECK2482;gene_synonym=JW2471;db_xref=EcoGene:EG14214 EMBL CDS 2606917 2608497 . + 0 ID=.5421;gene=hyfF;locus_tag=b2486;gene_synonym=ECK2482;gene_synonym=JW2471;function=enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;note=hydrogenase 4 membrane subunit%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=hydrogenase 4%2C membrane subunit;protein_id=AAC75539.1;db_xref=GI:1788831;db_xref=ASAP:ABE-0008191;db_xref=UniProtKB/Swiss-Prot:P77437;db_xref=EcoGene:EG14214 EMBL gene 2608487 2610154 . + . ID=.5422;gene=hyfG;locus_tag=b2487;gene_synonym=ECK2483;gene_synonym=JW2472;db_xref=EcoGene:EG14215 EMBL CDS 2608487 2610154 . + 0 ID=.5423;gene=hyfG;locus_tag=b2487;gene_synonym=ECK2483;gene_synonym=JW2472;ec_number=1.-.-.-;function=enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;note=hydrogenase 4 subunit%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=hydrogenase 4%2C subunit;protein_id=AAC75540.1;db_xref=GI:1788832;db_xref=ASAP:ABE-0008194;db_xref=UniProtKB/Swiss-Prot:P77329;db_xref=EcoGene:EG14215 EMBL gene 2610164 2610709 . + . ID=.5424;gene=hyfH;locus_tag=b2488;gene_synonym=ECK2484;gene_synonym=JW2473;db_xref=EcoGene:EG14216 EMBL CDS 2610164 2610709 . + 0 ID=.5425;gene=hyfH;locus_tag=b2488;gene_synonym=ECK2484;gene_synonym=JW2473;ec_number=1.-.-.-;function=enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;note=hydrogenase 4 Fe-S subunit%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=hydrogenase 4%2C Fe-S subunit;protein_id=AAC75541.1;db_xref=GI:1788833;db_xref=ASAP:ABE-0008196;db_xref=UniProtKB/Swiss-Prot:P77423;db_xref=EcoGene:EG14216 EMBL gene 2610706 2611464 . + . ID=.5426;gene=hyfI;locus_tag=b2489;gene_synonym=ECK2485;gene_synonym=JW5805;db_xref=EcoGene:EG14217 EMBL CDS 2610706 2611464 . + 0 ID=.5427;gene=hyfI;locus_tag=b2489;gene_synonym=ECK2485;gene_synonym=JW5805;ec_number=1.-.-.-;function=enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;note=hydrogenase 4 Fe-S subunit%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=hydrogenase 4%2C Fe-S subunit;protein_id=AAC75542.1;db_xref=GI:1788834;db_xref=ASAP:ABE-0008198;db_xref=UniProtKB/Swiss-Prot:P77668;db_xref=EcoGene:EG14217 EMBL gene 2611457 2611870 . + . ID=.5428;gene=hyfJ;locus_tag=b2490;gene_synonym=ECK2486;gene_synonym=JW2475;db_xref=EcoGene:EG14218 EMBL CDS 2611457 2611870 . + 0 ID=.5429;gene=hyfJ;locus_tag=b2490;gene_synonym=ECK2486;gene_synonym=JW2475;function=putative factor%3B Not classified;note=GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=putative processing element hydrogenase 4;protein_id=AAC75543.2;db_xref=GI:87082116;db_xref=ASAP:ABE-0008200;db_xref=UniProtKB/Swiss-Prot:P77453;db_xref=EcoGene:EG14218 EMBL gene 2611900 2613912 . + . ID=.5430;gene=hyfR;locus_tag=b2491;gene_synonym=ECK2487;gene_synonym=JW2476;db_xref=EcoGene:EG14219 EMBL CDS 2611900 2613912 . + 0 ID=.5431;gene=hyfR;locus_tag=b2491;gene_synonym=ECK2487;gene_synonym=JW2476;function=putative regulator%3B Not classified;note=putative 2-component regulator%2C interaction with sigma 54%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=hydrogenase-4 transcriptional activator;protein_id=AAC75544.2;db_xref=GI:87082117;db_xref=ASAP:ABE-0008204;db_xref=UniProtKB/Swiss-Prot:P71229;db_xref=EcoGene:EG14219 EMBL gene 2613934 2614782 . + . ID=.5432;gene=focB;locus_tag=b2492;gene_synonym=ECK2488;gene_synonym=JW2477;db_xref=EcoGene:EG14220 EMBL CDS 2613934 2614782 . + 0 ID=.5433;gene=focB;locus_tag=b2492;gene_synonym=ECK2488;gene_synonym=JW2477;function=putative transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=probable formate transporter (formate channel 2)%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative formate transporter;protein_id=AAC75545.1;db_xref=GI:1788837;db_xref=ASAP:ABE-0008206;db_xref=UniProtKB/Swiss-Prot:P77733;db_xref=EcoGene:EG14220 EMBL gene 2614820 2615881 . - . ID=.5434;gene=yfgO;locus_tag=b2493;gene_synonym=ECK2489;gene_synonym=JW2478;gene_synonym=perM;db_xref=EcoGene:EG14221 EMBL CDS 2614820 2615881 . - 0 ID=.5435;gene=yfgO;locus_tag=b2493;gene_synonym=ECK2489;gene_synonym=JW2478;gene_synonym=perM;function=putative transport%3B Not classified;note=putative permease%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative UPF0118 family inner membrane permease;protein_id=AAC75546.1;db_xref=GI:1788838;db_xref=ASAP:ABE-0008208;db_xref=UniProtKB/Swiss-Prot:P0AFI9;db_xref=EcoGene:EG14221 EMBL gene 2616094 2617557 . + . ID=.5436;gene=bepA;locus_tag=b2494;gene_synonym=ECK2490;gene_synonym=JW2479;gene_synonym=yfgC;db_xref=EcoGene:EG14199 EMBL CDS 2616094 2617557 . + 0 ID=.5437;gene=bepA;locus_tag=b2494;gene_synonym=ECK2490;gene_synonym=JW2479;gene_synonym=yfgC;codon_start=1;transl_table=11;product=OM protein maintenance and assembly metalloprotease and chaperone%2C periplasmic;protein_id=AAC75547.1;db_xref=GI:1788840;db_xref=ASAP:ABE-0008212;db_xref=UniProtKB/Swiss-Prot:P66948;db_xref=EcoGene:EG14199 EMBL gene 2617578 2617937 . + . ID=.5438;gene=yfgD;locus_tag=b2495;gene_synonym=ECK2491;gene_synonym=JW2480;db_xref=EcoGene:EG14200 EMBL CDS 2617578 2617937 . + 0 ID=.5439;gene=yfgD;locus_tag=b2495;gene_synonym=ECK2491;gene_synonym=JW2480;function=putative enzyme%3B Not classified;note=GO_process: GO:0006805 - xenobiotic metabolic process;codon_start=1;transl_table=11;product=putative oxidoreductase;protein_id=AAC75548.1;db_xref=GI:1788841;db_xref=ASAP:ABE-0008214;db_xref=UniProtKB/Swiss-Prot:P76569;db_xref=EcoGene:EG14200 EMBL repeat_region 2617968 2618004 . + . ID=.5440;note=REP182 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 2618075 2618776 . - . ID=.5441;gene=hda;locus_tag=b2496;gene_synonym=ECK2492;gene_synonym=idaB;gene_synonym=JW5397;gene_synonym=yfgE;db_xref=EcoGene:EG14201 EMBL CDS 2618075 2618776 . - 0 ID=.5442;gene=hda;locus_tag=b2496;gene_synonym=ECK2492;gene_synonym=idaB;gene_synonym=JW5397;gene_synonym=yfgE;function=putative factor%3B Not classified;experiment=N-terminus verified by Edman degradation: PMID 18977760;note=putative DNA replication factor%3B GO_process: GO:0006261 - DNA-dependent DNA replication;codon_start=1;transl_table=11;product=ATPase regulatory factor involved in DnaA inactivation;protein_id=AAC75549.2;db_xref=GI:226510964;db_xref=ASAP:ABE-0008217;db_xref=UniProtKB/Swiss-Prot:P69931;db_xref=EcoGene:EG14201 EMBL gene 2618871 2620160 . - . ID=.5443;gene=uraA;locus_tag=b2497;gene_synonym=ECK2493;gene_synonym=JW2482;db_xref=EcoGene:EG12129 EMBL CDS 2618871 2620160 . - 0 ID=.5444;gene=uraA;locus_tag=b2497;gene_synonym=ECK2493;gene_synonym=JW2482;function=transport%3B Transport of small molecules: Nucleosides%2C purines%2C pyrimidines;note=uracil transport%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion;codon_start=1;transl_table=11;product=uracil permease;protein_id=AAC75550.1;db_xref=GI:1788843;db_xref=ASAP:ABE-0008219;db_xref=UniProtKB/Swiss-Prot:P0AGM7;db_xref=EcoGene:EG12129 EMBL gene 2620246 2620872 . - . ID=.5445;gene=upp;locus_tag=b2498;gene_synonym=ECK2494;gene_synonym=JW2483;gene_synonym=uraP;db_xref=EcoGene:EG11332 EMBL CDS 2620246 2620872 . - 0 ID=.5446;gene=upp;locus_tag=b2498;gene_synonym=ECK2494;gene_synonym=JW2483;gene_synonym=uraP;ec_number=2.4.2.9;function=enzyme%3B Salvage of nucleosides and nucleotides;experiment=N-terminus verified by Edman degradation: PMID 9298646;note=GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion;codon_start=1;transl_table=11;product=uracil phosphoribosyltransferase;protein_id=AAC75551.2;db_xref=GI:87082118;db_xref=ASAP:ABE-0008224;db_xref=UniProtKB/Swiss-Prot:P0A8F0;db_xref=EcoGene:EG11332 EMBL gene 2621197 2622234 . + . ID=.5447;gene=purM;locus_tag=b2499;gene_synonym=ECK2495;gene_synonym=JW2484;gene_synonym=purG;gene_synonym=purI;db_xref=EcoGene:EG10798 EMBL CDS 2621197 2622234 . + 0 ID=.5448;gene=purM;locus_tag=b2499;gene_synonym=ECK2495;gene_synonym=JW2484;gene_synonym=purG;gene_synonym=purI;ec_number=6.3.3.1;function=enzyme%3B Purine ribonucleotide biosynthesis;note=phosphoribosylaminoimidazole synthetase %3D AIR synthetase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006164 - purine nucleotide biosynthetic process;codon_start=1;transl_table=11;product=phosphoribosylaminoimidazole synthetase;protein_id=AAC75552.1;db_xref=GI:1788845;db_xref=ASAP:ABE-0008230;db_xref=UniProtKB/Swiss-Prot:P08178;db_xref=EcoGene:EG10798 EMBL gene 2622234 2622872 . + . ID=.5449;gene=purN;locus_tag=b2500;gene_synonym=ade;gene_synonym=ECK2496;gene_synonym=JW2485;db_xref=EcoGene:EG10799 EMBL CDS 2622234 2622872 . + 0 ID=.5450;gene=purN;locus_tag=b2500;gene_synonym=ade;gene_synonym=ECK2496;gene_synonym=JW2485;ec_number=2.1.2.2;function=enzyme%3B Purine ribonucleotide biosynthesis;experiment=N-terminus verified by Edman degradation: PMID 2204419;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006164 - purine nucleotide biosynthetic process;codon_start=1;transl_table=11;product=phosphoribosylglycinamide formyltransferase 1;protein_id=AAC75553.1;db_xref=GI:1788846;db_xref=ASAP:ABE-0008232;db_xref=UniProtKB/Swiss-Prot:P08179;db_xref=EcoGene:EG10799 EMBL gene 2623044 2625110 . + . ID=.5451;gene=ppk;locus_tag=b2501;gene_synonym=ECK2497;gene_synonym=JW2486;db_xref=EcoGene:EG11510 EMBL CDS 2623044 2625110 . + 0 ID=.5452;gene=ppk;locus_tag=b2501;gene_synonym=ECK2497;gene_synonym=JW2486;ec_number=2.7.4.1;function=enzyme%3B Central intermediary metabolism: Phosphorus compounds;note=polyphosphate kinase%3B GO_process: GO:0006793 - phosphorus metabolic process;codon_start=1;transl_table=11;product=polyphosphate kinase%2C component of RNA degradosome;protein_id=AAC75554.1;db_xref=GI:1788847;db_xref=ASAP:ABE-0008235;db_xref=UniProtKB/Swiss-Prot:P0A7B1;db_xref=EcoGene:EG11510 EMBL gene 2625115 2626656 . + . ID=.5453;gene=ppx;locus_tag=b2502;gene_synonym=ECK2498;gene_synonym=JW2487;db_xref=EcoGene:EG11403 EMBL CDS 2625115 2626656 . + 0 ID=.5454;gene=ppx;locus_tag=b2502;gene_synonym=ECK2498;gene_synonym=JW2487;ec_number=3.6.1.11;function=enzyme%3B Central intermediary metabolism: Phosphorus compounds;note=GO_process: GO:0006793 - phosphorus metabolic process;codon_start=1;transl_table=11;product=exopolyphosphatase;protein_id=AAC75555.1;db_xref=GI:1788848;db_xref=ASAP:ABE-0008238;db_xref=UniProtKB/Swiss-Prot:P0AFL6;db_xref=EcoGene:EG11403 EMBL gene 2626695 2628938 . - . ID=.5455;gene=yfgF;locus_tag=b2503;gene_synonym=ECK2499;gene_synonym=JW2488;db_xref=EcoGene:EG14202 EMBL CDS 2626695 2628938 . - 0 ID=.5456;gene=yfgF;locus_tag=b2503;gene_synonym=ECK2499;gene_synonym=JW2488;function=enzyme%3B Not classified;note=putative cytochrome C-type biogenesis protein;codon_start=1;transl_table=11;product=cyclic-di-GMP phosphodiesterase%2C anaerobic;protein_id=AAC75556.1;db_xref=GI:1788849;db_xref=ASAP:ABE-0008240;db_xref=UniProtKB/Swiss-Prot:P77172;db_xref=EcoGene:EG14202 EMBL gene 2629290 2629481 . + . ID=.5457;gene=yfgG;locus_tag=b2504;gene_synonym=ECK2500;gene_synonym=JW5399;db_xref=EcoGene:EG14203 EMBL CDS 2629290 2629481 . + 0 ID=.5458;gene=yfgG;locus_tag=b2504;gene_synonym=ECK2500;gene_synonym=JW5399;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC75557.1;db_xref=GI:1788851;db_xref=ASAP:ABE-0008247;db_xref=UniProtKB/Swiss-Prot:P64545;db_xref=EcoGene:EG14203 EMBL gene 2629792 2630310 . + . ID=.5459;gene=yfgH;locus_tag=b2505;gene_synonym=ECK2501;gene_synonym=JW5400;db_xref=EcoGene:EG14204 EMBL CDS 2629792 2630310 . + 0 ID=.5460;gene=yfgH;locus_tag=b2505;gene_synonym=ECK2501;gene_synonym=JW5400;function=putative membrane%3B Not classified;note=putative outer membrane lipoprotein%3B GO_component: GO:0009279 - cell outer membrane;codon_start=1;transl_table=11;product=outer membrane integrity lipoprotein;protein_id=AAC75558.1;db_xref=GI:1788852;db_xref=ASAP:ABE-0008250;db_xref=UniProtKB/Swiss-Prot:P65290;db_xref=EcoGene:EG14204 EMBL gene 2630326 2630865 . + . ID=.5461;gene=yfgI;locus_tag=b2506;gene_synonym=ECK2502;gene_synonym=JW2490;db_xref=EcoGene:EG14205 EMBL CDS 2630326 2630865 . + 0 ID=.5462;gene=yfgI;locus_tag=b2506;gene_synonym=ECK2502;gene_synonym=JW2490;note=putative membrane protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=nalidixic acid resistance protein%2C putative periplasmic protein;protein_id=AAC75559.1;db_xref=GI:1788853;db_xref=ASAP:ABE-0008252;db_xref=UniProtKB/Swiss-Prot:P76573;db_xref=EcoGene:EG14205 EMBL gene 2630958 2632535 . - . ID=.5463;gene=guaA;locus_tag=b2507;gene_synonym=ECK2503;gene_synonym=JW2491;db_xref=EcoGene:EG10420 EMBL CDS 2630958 2632535 . - 0 ID=.5464;gene=guaA;locus_tag=b2507;gene_synonym=ECK2503;gene_synonym=JW2491;ec_number=6.3.5.2;function=enzyme%3B Purine ribonucleotide biosynthesis;experiment=N-terminus verified by Edman degradation: PMID 3894345;note=GMP synthetase (glutamine-hydrolyzing)%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006164 - purine nucleotide biosynthetic process%3B GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion;codon_start=1;transl_table=11;product=GMP synthetase (glutamine aminotransferase);protein_id=AAC75560.1;db_xref=GI:1788854;db_xref=ASAP:ABE-0008254;db_xref=UniProtKB/Swiss-Prot:P04079;db_xref=EcoGene:EG10420 EMBL gene 2632604 2634070 . - . ID=.5465;gene=guaB;locus_tag=b2508;gene_synonym=ECK2504;gene_synonym=guaR;gene_synonym=JW5401;db_xref=EcoGene:EG10421 EMBL CDS 2632604 2634070 . - 0 ID=.5466;gene=guaB;locus_tag=b2508;gene_synonym=ECK2504;gene_synonym=guaR;gene_synonym=JW5401;ec_number=1.1.1.205;function=enzyme%3B Purine ribonucleotide biosynthesis;experiment=N-terminus verified by Edman degradation: PMID 9298646%2C9600841%2C9629924%2C9740056;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006164 - purine nucleotide biosynthetic process%3B GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion;codon_start=1;transl_table=11;product=IMP dehydrogenase;protein_id=AAC75561.1;db_xref=GI:1788855;db_xref=ASAP:ABE-0008257;db_xref=UniProtKB/Swiss-Prot:P0ADG7;db_xref=EcoGene:EG10421 EMBL gene 2634232 2635602 . + . ID=.5467;gene=xseA;locus_tag=b2509;gene_synonym=ECK2505;gene_synonym=JW2493;gene_synonym=xse;db_xref=EcoGene:EG11072 EMBL CDS 2634232 2635602 . + 0 ID=.5468;gene=xseA;locus_tag=b2509;gene_synonym=ECK2505;gene_synonym=JW2493;gene_synonym=xse;ec_number=3.1.11.6;function=enzyme%3B Degradation of DNA;experiment=N-terminus verified by Edman degradation: PMID 3021756;note=GO_process: GO:0006308 - DNA catabolic process;codon_start=1;transl_table=11;product=exonuclease VII%2C large subunit;protein_id=AAC75562.1;db_xref=GI:1788856;db_xref=ASAP:ABE-0008263;db_xref=UniProtKB/Swiss-Prot:P04994;db_xref=EcoGene:EG11072 EMBL gene 2635599 2635814 . - . ID=.5469;gene=yfgJ;locus_tag=b2510;gene_synonym=ECK2506;gene_synonym=JW5402;db_xref=EcoGene:EG14206 EMBL CDS 2635599 2635814 . - 0 ID=.5470;gene=yfgJ;locus_tag=b2510;gene_synonym=ECK2506;gene_synonym=JW5402;note=GO_process: GO:0042966 - biotin carboxyl carrier protein biosynthetic process;codon_start=1;transl_table=11;product=DUF1407 family protein;protein_id=AAC75563.2;db_xref=GI:87082119;db_xref=ASAP:ABE-0008266;db_xref=UniProtKB/Swiss-Prot:P76575;db_xref=EcoGene:EG14206 EMBL gene 2635884 2637356 . - . ID=.5471;gene=der;locus_tag=b2511;gene_synonym=ECK2507;gene_synonym=engA;gene_synonym=JW5403;gene_synonym=yfgK;db_xref=EcoGene:EG14207 EMBL CDS 2635884 2637356 . - 0 ID=.5472;gene=der;locus_tag=b2511;gene_synonym=ECK2507;gene_synonym=engA;gene_synonym=JW5403;gene_synonym=yfgK;function=putative factor%3B Not classified;note=putative GTP-binding factor;codon_start=1;transl_table=11;product=GTPase%3B multicopy suppressor of ftsJ;protein_id=AAC75564.2;db_xref=GI:87082120;db_xref=ASAP:ABE-0008270;db_xref=UniProtKB/Swiss-Prot:P0A6P5;db_xref=EcoGene:EG14207 EMBL gene 2637474 2638652 . - . ID=.5473;gene=bamB;locus_tag=b2512;gene_synonym=ECK2508;gene_synonym=JW2496;gene_synonym=yfgL;db_xref=EcoGene:EG14208 EMBL CDS 2637474 2638652 . - 0 ID=.5474;gene=bamB;locus_tag=b2512;gene_synonym=ECK2508;gene_synonym=JW2496;gene_synonym=yfgL;note=putative dehydrogenase%3B GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=BamABCDE complex OM biogenesis lipoprotein;protein_id=AAC75565.1;db_xref=GI:1788859;db_xref=ASAP:ABE-0008272;db_xref=UniProtKB/Swiss-Prot:P77774;db_xref=EcoGene:EG14208 EMBL gene 2638663 2639283 . - . ID=.5475;gene=yfgM;locus_tag=b2513;gene_synonym=ECK2509;gene_synonym=JW2497;db_xref=EcoGene:EG14209 EMBL CDS 2638663 2639283 . - 0 ID=.5476;gene=yfgM;locus_tag=b2513;gene_synonym=ECK2509;gene_synonym=JW2497;codon_start=1;transl_table=11;product=ancillary SecYEG translocon subunit%3B putative anti-RcsB factor;protein_id=AAC75566.1;db_xref=GI:1788860;db_xref=ASAP:ABE-0008274;db_xref=UniProtKB/Swiss-Prot:P76576;db_xref=EcoGene:EG14209 EMBL gene 2639301 2640575 . - . ID=.5477;gene=hisS;locus_tag=b2514;gene_synonym=ECK2510;gene_synonym=JW2498;db_xref=EcoGene:EG10453 EMBL CDS 2639301 2640575 . - 0 ID=.5478;gene=hisS;locus_tag=b2514;gene_synonym=ECK2510;gene_synonym=JW2498;ec_number=6.1.1.21;function=enzyme%3B Aminoacyl tRNA synthetases%2C tRNA modification;note=histidine tRNA synthetase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006418 - tRNA aminoacylation for protein translation;codon_start=1;transl_table=11;product=histidyl tRNA synthetase;protein_id=AAC75567.1;db_xref=GI:1788861;db_xref=ASAP:ABE-0008278;db_xref=UniProtKB/Swiss-Prot:P60906;db_xref=EcoGene:EG10453 EMBL gene 2640686 2641804 . - . ID=.5479;gene=ispG;locus_tag=b2515;gene_synonym=ECK2511;gene_synonym=gcpE;gene_synonym=JW2499;db_xref=EcoGene:EG10370 EMBL CDS 2640686 2641804 . - 0 ID=.5480;gene=ispG;locus_tag=b2515;gene_synonym=ECK2511;gene_synonym=gcpE;gene_synonym=JW2499;ec_number=1.17.7.1;codon_start=1;transl_table=11;product=1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase;protein_id=AAC75568.1;db_xref=GI:1788863;db_xref=ASAP:ABE-0008281;db_xref=UniProtKB/Swiss-Prot:P62620;db_xref=EcoGene:EG10370 EMBL gene 2641831 2642844 . - . ID=.5481;gene=rodZ;locus_tag=b2516;gene_synonym=ECK2512;gene_synonym=JW2500;gene_synonym=yfgA;db_xref=EcoGene:EG10015 EMBL CDS 2641831 2642844 . - 0 ID=.5482;gene=rodZ;locus_tag=b2516;gene_synonym=ECK2512;gene_synonym=JW2500;gene_synonym=yfgA;function=putative membrane%3B Not classified;note=putative membrane protein;codon_start=1;transl_table=11;product=MreB assembly cytoskeletal protein;protein_id=AAC75569.1;db_xref=GI:1788864;db_xref=ASAP:ABE-0008283;db_xref=UniProtKB/Swiss-Prot:P27434;db_xref=EcoGene:EG10015 EMBL gene 2643129 2644283 . - . ID=.5483;gene=rlmN;locus_tag=b2517;gene_synonym=ECK2513;gene_synonym=JW2501;gene_synonym=yfgB;db_xref=EcoGene:EG12401 EMBL CDS 2643129 2644283 . - 0 ID=.5484;gene=rlmN;locus_tag=b2517;gene_synonym=ECK2513;gene_synonym=JW2501;gene_synonym=yfgB;function=enzyme%3B rRNA modification;codon_start=1;transl_table=11;product=dual specificity 23S rRNA m(2)A2503%2C tRNA m(2)A37 methyltransferase%2C SAM-dependent;protein_id=AAC75570.1;db_xref=GI:1788865;db_xref=ASAP:ABE-0008287;db_xref=UniProtKB/Swiss-Prot:P36979;db_xref=EcoGene:EG12401 EMBL gene 2644433 2644864 . - . ID=.5485;gene=ndk;locus_tag=b2518;gene_synonym=ECK2514;gene_synonym=JW2502;db_xref=EcoGene:EG10650 EMBL CDS 2644433 2644864 . - 0 ID=.5486;gene=ndk;locus_tag=b2518;gene_synonym=ECK2514;gene_synonym=JW2502;ec_number=2.7.4.6;function=enzyme%3B Purine ribonucleotide biosynthesis;note=nucleoside diphosphate kinase%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion%3B GO_process: GO:0009152 - purine ribonucleotide biosynthetic process;codon_start=1;transl_table=11;product=multifunctional nucleoside diphosphate kinase and apyrimidinic endonuclease and 3'-phosphodiesterase;protein_id=AAC75571.1;db_xref=GI:1788866;db_xref=ASAP:ABE-0008291;db_xref=UniProtKB/Swiss-Prot:P0A763;db_xref=EcoGene:EG10650 EMBL gene 2645013 2647325 . - . ID=.5487;gene=pbpC;locus_tag=b2519;gene_synonym=ECK2515;gene_synonym=JW2503;gene_synonym=yfgN;db_xref=EcoGene:EG14210 EMBL CDS 2645013 2647325 . - 0 ID=.5488;gene=pbpC;locus_tag=b2519;gene_synonym=ECK2515;gene_synonym=JW2503;gene_synonym=yfgN;ec_number=2.4.1.-;function=enzyme%3B Murein sacculus%2C peptidoglycan;note=penicillin binding protein 1C (PBP 1C)%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_process: GO:0009252 - peptidoglycan biosynthetic process;codon_start=1;transl_table=11;product=penicillin-insensitive murein repair transglycosylase%3B inactive transpeptidase domain protein;protein_id=AAC75572.1;db_xref=GI:1788867;db_xref=ASAP:ABE-0008294;db_xref=UniProtKB/Swiss-Prot:P76577;db_xref=EcoGene:EG14210 EMBL gene 2647326 2652287 . - . ID=.5489;gene=yfhM;locus_tag=b2520;gene_synonym=ECK2516;gene_synonym=JW2504;db_xref=EcoGene:EG13394 EMBL CDS 2647326 2652287 . - 0 ID=.5490;gene=yfhM;locus_tag=b2520;gene_synonym=ECK2516;gene_synonym=JW2504;codon_start=1;transl_table=11;product=bacterial alpha2-macroglobulin colonization factor ECAM%3B anti-host protease defense factor%3B periplasmic inner membrane-anchored lipoprotein;protein_id=AAC75573.1;db_xref=GI:1788868;db_xref=ASAP:ABE-0008296;db_xref=UniProtKB/Swiss-Prot:P76578;db_xref=EcoGene:EG13394 EMBL gene 2652494 2653339 . + . ID=.5491;gene=sseA;locus_tag=b2521;gene_synonym=ECK2517;gene_synonym=JW2505;db_xref=EcoGene:EG11600 EMBL CDS 2652494 2653339 . + 0 ID=.5492;gene=sseA;locus_tag=b2521;gene_synonym=ECK2517;gene_synonym=JW2505;ec_number=2.8.1.2;function=putative enzyme%3B Not classified;note=putative thiosulfate sulfurtransferase%3B GO_process: GO:0006790 - sulfur metabolic process;codon_start=1;transl_table=11;product=3-mercaptopyruvate sulfurtransferase;protein_id=AAC75574.2;db_xref=GI:87082121;db_xref=ASAP:ABE-0008299;db_xref=UniProtKB/Swiss-Prot:P31142;db_xref=EcoGene:EG11600 EMBL gene 2653855 2654158 . + . ID=.5493;gene=ryfA;locus_tag=b4440;gene_synonym=ECK2518;gene_synonym=JWR0244;gene_synonym=PAIR3b;gene_synonym=tp1;db_xref=EcoGene:EG31154 EMBL ncRNA 2653855 2654158 . + . ID=.5494;ncrna_class=other;gene=ryfA;locus_tag=b4440;gene_synonym=ECK2518;gene_synonym=JWR0244;gene_synonym=PAIR3b;gene_synonym=tp1;product=novel sRNA%2C function unknown;note=identified in a large scale screen;db_xref=ASAP:ABE-0047260;db_xref=EcoGene:EG31154 EMBL gene 2654157 2654933 . - . ID=.5495;gene=sseB;locus_tag=b2522;gene_synonym=ECK2519;gene_synonym=JW5404;db_xref=EcoGene:EG11601 EMBL CDS 2654157 2654933 . - 0 ID=.5496;gene=sseB;locus_tag=b2522;gene_synonym=ECK2519;gene_synonym=JW5404;function=phenotype%3B Not classified;note=enhanced serine sensitivity%3B GO_process: GO:0006790 - sulfur metabolic process;codon_start=1;transl_table=11;product=rhodanase-like enzyme%2C sulfur transfer from thiosulfate;protein_id=AAC75575.2;db_xref=GI:87082122;db_xref=ASAP:ABE-0008301;db_xref=UniProtKB/Swiss-Prot:P0AFZ1;db_xref=EcoGene:EG11601 EMBL repeat_region 2654970 2655066 . + . ID=.5497;note=RIP183 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 2655075 2656358 . - . ID=.5498;gene=pepB;locus_tag=b2523;gene_synonym=ECK2520;gene_synonym=JW2507;gene_synonym=yfhI;db_xref=EcoGene:EG12310 EMBL CDS 2655075 2656358 . - 0 ID=.5499;gene=pepB;locus_tag=b2523;gene_synonym=ECK2520;gene_synonym=JW2507;gene_synonym=yfhI;ec_number=3.4.11.23;function=putative enzyme%3B Not classified;note=putative peptidase;codon_start=1;transl_table=11;product=aminopeptidase B;protein_id=AAC75576.2;db_xref=GI:87082123;db_xref=ASAP:ABE-0008305;db_xref=UniProtKB/Swiss-Prot:P37095;db_xref=EcoGene:EG12310 EMBL gene 2656536 2656736 . - . ID=.5500;gene=iscX;locus_tag=b2524;gene_synonym=ECK2521;gene_synonym=JW2508;gene_synonym=yfhJ;db_xref=EcoGene:EG12311 EMBL CDS 2656536 2656736 . - 0 ID=.5501;gene=iscX;locus_tag=b2524;gene_synonym=ECK2521;gene_synonym=JW2508;gene_synonym=yfhJ;note=GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=Fe(2+) donor and activity modulator for cysteine desulfurase;protein_id=AAC75577.1;db_xref=GI:1788873;db_xref=ASAP:ABE-0008309;db_xref=UniProtKB/Swiss-Prot:P0C0L9;db_xref=EcoGene:EG12311 EMBL gene 2656748 2657083 . - . ID=.5502;gene=fdx;locus_tag=b2525;gene_synonym=ECK2522;gene_synonym=JW2509;db_xref=EcoGene:EG11328 EMBL CDS 2656748 2657083 . - 0 ID=.5503;gene=fdx;locus_tag=b2525;gene_synonym=ECK2522;gene_synonym=JW2509;function=carrier%3B Energy metabolism%2C carbon: Electron transport;note=[2FE-2S] ferredoxin%2C electron carrer protein%3B GO_function: GO:0009055 - electron carrier activity;codon_start=1;transl_table=11;product=[2Fe-2S] ferredoxin;protein_id=AAC75578.1;db_xref=GI:1788874;db_xref=ASAP:ABE-0008311;db_xref=UniProtKB/Swiss-Prot:P0A9R4;db_xref=EcoGene:EG11328 EMBL gene 2657085 2658935 . - . ID=.5504;gene=hscA;locus_tag=b2526;gene_synonym=ECK2523;gene_synonym=hsc;gene_synonym=JW2510;db_xref=EcoGene:EG12130 EMBL CDS 2657085 2658935 . - 0 ID=.5505;gene=hscA;locus_tag=b2526;gene_synonym=ECK2523;gene_synonym=hsc;gene_synonym=JW2510;function=factor%3B Chaperones;note=DnaK-homologue chaperone Hsc66%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=DnaK-like molecular chaperone specific for IscU;protein_id=AAC75579.1;db_xref=GI:1788875;db_xref=ASAP:ABE-0008315;db_xref=UniProtKB/Swiss-Prot:P0A6Z1;db_xref=EcoGene:EG12130 EMBL gene 2658952 2659467 . - . ID=.5506;gene=hscB;locus_tag=b2527;gene_synonym=ECK2524;gene_synonym=JW2511;gene_synonym=yfhE;db_xref=EcoGene:EG12131 EMBL CDS 2658952 2659467 . - 0 ID=.5507;gene=hscB;locus_tag=b2527;gene_synonym=ECK2524;gene_synonym=JW2511;gene_synonym=yfhE;function=factor%3B Chaperones;note=GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=HscA co-chaperone%2C J domain-containing protein Hsc56%3B IscU-specific chaperone HscAB;protein_id=AAC75580.1;db_xref=GI:1788876;db_xref=ASAP:ABE-0008317;db_xref=UniProtKB/Swiss-Prot:P0A6L9;db_xref=EcoGene:EG12131 EMBL gene 2659563 2659886 . - . ID=.5508;gene=iscA;locus_tag=b2528;gene_synonym=ECK2525;gene_synonym=JW2512;gene_synonym=yfhF;db_xref=EcoGene:EG12132 EMBL CDS 2659563 2659886 . - 0 ID=.5509;gene=iscA;locus_tag=b2528;gene_synonym=ECK2525;gene_synonym=JW2512;gene_synonym=yfhF;function=putative regulator%3B Not classified;note=GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=FeS cluster assembly protein;protein_id=AAC75581.1;db_xref=GI:1788877;db_xref=ASAP:ABE-0008319;db_xref=UniProtKB/Swiss-Prot:P0AAC8;db_xref=EcoGene:EG12132 EMBL gene 2659903 2660289 . - . ID=.5510;gene=iscU;locus_tag=b2529;gene_synonym=ECK2526;gene_synonym=hsm-5;gene_synonym=JW2513;gene_synonym=miaC;gene_synonym=nifU;gene_synonym=yfhN;db_xref=EcoGene:EG13395 EMBL CDS 2659903 2660289 . - 0 ID=.5511;gene=iscU;locus_tag=b2529;gene_synonym=ECK2526;gene_synonym=hsm-5;gene_synonym=JW2513;gene_synonym=miaC;gene_synonym=nifU;gene_synonym=yfhN;note=GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=iron-sulfur cluster assembly scaffold protein;protein_id=AAC75582.1;db_xref=GI:1788878;db_xref=ASAP:ABE-0008321;db_xref=UniProtKB/Swiss-Prot:P0ACD4;db_xref=EcoGene:EG13395 EMBL gene 2660317 2661531 . - . ID=.5512;gene=iscS;locus_tag=b2530;gene_synonym=ECK2527;gene_synonym=JW2514;gene_synonym=nuvC;gene_synonym=yfhO;gene_synonym=yzzO;db_xref=EcoGene:EG12677 EMBL CDS 2660317 2661531 . - 0 ID=.5513;gene=iscS;locus_tag=b2530;gene_synonym=ECK2527;gene_synonym=JW2514;gene_synonym=nuvC;gene_synonym=yfhO;gene_synonym=yzzO;ec_number=2.8.1.7;function=enzyme%3B tRNA modification;experiment=N-terminus verified by Edman degradation: PMID 9298646;note=cysteine desulfurase%3B cysteine desulfurase (tRNA sulfurtransferase) PLP-dependent%3B GO_process: GO:0009451 - RNA modification;codon_start=1;transl_table=11;product=cysteine desulfurase (tRNA sulfurtransferase)%2C PLP-dependent;protein_id=AAT48142.1;db_xref=GI:48994898;db_xref=ASAP:ABE-0008324;db_xref=UniProtKB/Swiss-Prot:P0A6B7;db_xref=EcoGene:EG12677 EMBL gene 2661643 2662131 . - . ID=.5514;gene=iscR;locus_tag=b2531;gene_synonym=ECK2528;gene_synonym=JW2515;gene_synonym=yfhP;db_xref=EcoGene:EG13397 EMBL CDS 2661643 2662131 . - 0 ID=.5515;gene=iscR;locus_tag=b2531;gene_synonym=ECK2528;gene_synonym=JW2515;gene_synonym=yfhP;function=regulation of Fe-S cluster assembly genes;note=Fe-S cluster-containing transcription factor%3B transcriptional repressor of iscRSUA operon%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=isc operon transcriptional repressor%3B suf operon transcriptional activator%3B oxidative stress- and iron starvation-inducible%3B autorepressor;protein_id=AAC75584.1;db_xref=GI:1788880;db_xref=ASAP:ABE-0008326;db_xref=UniProtKB/Swiss-Prot:P0AGK8;db_xref=EcoGene:EG13397 EMBL repeat_region 2662309 2662574 . + . ID=.5516;note=REP184 (repetitive extragenic palindromic) element%3B contains 6 REP sequences EMBL gene 2662583 2663323 . - . ID=.5517;gene=trmJ;locus_tag=b2532;gene_synonym=ECK2529;gene_synonym=JW2516;gene_synonym=yfhQ;db_xref=EcoGene:EG13452 EMBL CDS 2662583 2663323 . - 0 ID=.5518;gene=trmJ;locus_tag=b2532;gene_synonym=ECK2529;gene_synonym=JW2516;gene_synonym=yfhQ;function=enzyme%3B tRNA modification;codon_start=1;transl_table=11;product=tRNA mC32%2CmU32 2'-O-methyltransferase%2C SAM-dependent;protein_id=AAC75585.1;db_xref=GI:1788881;db_xref=ASAP:ABE-0008332;db_xref=UniProtKB/Swiss-Prot:P0AE01;db_xref=EcoGene:EG13452 EMBL gene 2663442 2664245 . + . ID=.5519;gene=suhB;locus_tag=b2533;gene_synonym=ECK2530;gene_synonym=JW2517;gene_synonym=ssyA;db_xref=EcoGene:EG10983 EMBL CDS 2663442 2664245 . + 0 ID=.5520;gene=suhB;locus_tag=b2533;gene_synonym=ECK2530;gene_synonym=JW2517;gene_synonym=ssyA;ec_number=3.1.3.25;function=phenotype%3B Global regulatory functions;note=inositol-1-monophosphatase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=inositol monophosphatase;protein_id=AAC75586.1;db_xref=GI:1788882;db_xref=ASAP:ABE-0008337;db_xref=UniProtKB/Swiss-Prot:P0ADG4;db_xref=EcoGene:EG10983 EMBL gene 2664390 2665244 . + . ID=.5521;gene=yfhR;locus_tag=b2534;gene_synonym=ECK2531;gene_synonym=JW2518;db_xref=EcoGene:EG13453 EMBL CDS 2664390 2665244 . + 0 ID=.5522;gene=yfhR;locus_tag=b2534;gene_synonym=ECK2531;gene_synonym=JW2518;function=putative enzyme%3B Not classified;note=putative enzyme (3.4.-);codon_start=1;transl_table=11;product=putative S9 family prolyl oligopeptidase;protein_id=AAC75587.2;db_xref=GI:226510965;db_xref=ASAP:ABE-0008340;db_xref=UniProtKB/Swiss-Prot:P77538;db_xref=EcoGene:EG13453 EMBL gene 2665435 2666715 . + . ID=.5523;gene=csiE;locus_tag=b2535;gene_synonym=csi-16;gene_synonym=ECK2532;gene_synonym=JW5878;db_xref=EcoGene:EG13418 EMBL CDS 2665435 2666715 . + 0 ID=.5524;gene=csiE;locus_tag=b2535;gene_synonym=csi-16;gene_synonym=ECK2532;gene_synonym=JW5878;codon_start=1;transl_table=11;product=stationary phase inducible protein;protein_id=AAC75588.2;db_xref=GI:87082124;db_xref=ASAP:ABE-0008346;db_xref=UniProtKB/Swiss-Prot:P54901;db_xref=EcoGene:EG13418 EMBL gene 2666707 2667846 . - . ID=.5525;gene=hcaT;locus_tag=b2536;gene_synonym=ECK2533;gene_synonym=JW2520;gene_synonym=yfhS;db_xref=EcoGene:EG13454 EMBL CDS 2666707 2667846 . - 0 ID=.5526;gene=hcaT;locus_tag=b2536;gene_synonym=ECK2533;gene_synonym=JW2520;gene_synonym=yfhS;function=transport%3B Degradation of small molecules: Carbon compounds;note=MFS (major facilitator superfamily) transporter%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative 3-phenylpropionic transporter;protein_id=AAC75589.1;db_xref=GI:1788886;db_xref=ASAP:ABE-0008348;db_xref=UniProtKB/Swiss-Prot:Q47142;db_xref=EcoGene:EG13454 EMBL gene 2668006 2668896 . - . ID=.5527;gene=hcaR;locus_tag=b2537;gene_synonym=ECK2534;gene_synonym=JW2521;gene_synonym=phdR;gene_synonym=yfhT;db_xref=EcoGene:EG13455 EMBL CDS 2668006 2668896 . - 0 ID=.5528;gene=hcaR;locus_tag=b2537;gene_synonym=ECK2534;gene_synonym=JW2521;gene_synonym=phdR;gene_synonym=yfhT;function=regulator%3B Degradation of small molecules: Carbon compounds;note=transcriptional activator of hca cluster%3B completely contained in another CDS%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=hca operon transcriptional regulator;protein_id=AAC75590.1;db_xref=GI:1788887;db_xref=ASAP:ABE-0008351;db_xref=UniProtKB/Swiss-Prot:Q47141;db_xref=EcoGene:EG13455 EMBL gene 2668006 2668071 . - . ID=.5529;gene=iroK;locus_tag=b4706;gene_synonym=ECK4518;db_xref=EcoGene:EG14501 EMBL CDS 2668006 2668071 . - 0 ID=.5530;gene=iroK;locus_tag=b4706;gene_synonym=ECK4518;note=completely contained in another CDS;codon_start=1;transl_table=11;product=3-hydroxypropionic acid resistance peptide;protein_id=AGW80435.1;db_xref=GI:545778207;db_xref=EcoGene:EG14501 EMBL gene 2669032 2670393 . + . ID=.5531;gene=hcaE;locus_tag=b2538;gene_synonym=digA;gene_synonym=ECK2535;gene_synonym=hcaA;gene_synonym=hcaA1;gene_synonym=JW2522;gene_synonym=phdC1;gene_synonym=yfhU;db_xref=EcoGene:EG13456 EMBL CDS 2669032 2670393 . + 0 ID=.5532;gene=hcaE;locus_tag=b2538;gene_synonym=digA;gene_synonym=ECK2535;gene_synonym=hcaA;gene_synonym=hcaA1;gene_synonym=JW2522;gene_synonym=phdC1;gene_synonym=yfhU;ec_number=1.14.12.19;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=3-phenylpropionate dioxygenase%2C large (alpha) subunit;protein_id=AAC75591.1;db_xref=GI:1788888;db_xref=ASAP:ABE-0008355;db_xref=UniProtKB/Swiss-Prot:P0ABR5;db_xref=EcoGene:EG13456 EMBL gene 2670390 2670908 . + . ID=.5533;gene=hcaF;locus_tag=b2539;gene_synonym=digB;gene_synonym=ECK2536;gene_synonym=hcaA;gene_synonym=hcaA2;gene_synonym=hcaB;gene_synonym=JW2523;gene_synonym=phdC2;gene_synonym=yfhV;db_xref=EcoGene:EG13457 EMBL CDS 2670390 2670908 . + 0 ID=.5534;gene=hcaF;locus_tag=b2539;gene_synonym=digB;gene_synonym=ECK2536;gene_synonym=hcaA;gene_synonym=hcaA2;gene_synonym=hcaB;gene_synonym=JW2523;gene_synonym=phdC2;gene_synonym=yfhV;ec_number=1.14.12.19;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=small terminal subunit of phenylpropionate dioxygenase%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=3-phenylpropionate dioxygenase%2C small (beta) subunit;protein_id=AAC75592.1;db_xref=GI:1788889;db_xref=ASAP:ABE-0008357;db_xref=UniProtKB/Swiss-Prot:Q47140;db_xref=EcoGene:EG13457 EMBL gene 2670908 2671228 . + . ID=.5535;gene=hcaC;locus_tag=b2540;gene_synonym=ECK2537;gene_synonym=hcaA3;gene_synonym=JW2524;gene_synonym=phdB;gene_synonym=yfhW;db_xref=EcoGene:EG13458 EMBL CDS 2670908 2671228 . + 0 ID=.5536;gene=hcaC;locus_tag=b2540;gene_synonym=ECK2537;gene_synonym=hcaA3;gene_synonym=JW2524;gene_synonym=phdB;gene_synonym=yfhW;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=ferredoxin subunit of phenylpropionate dioxygenase%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=3-phenylpropionate dioxygenase%2C ferredoxin subunit;protein_id=AAC75593.1;db_xref=GI:1788890;db_xref=ASAP:ABE-0008359;db_xref=UniProtKB/Swiss-Prot:P0ABW0;db_xref=EcoGene:EG13458 EMBL gene 2671225 2672037 . + . ID=.5537;gene=hcaB;locus_tag=b2541;gene_synonym=ECK2538;gene_synonym=JW2525;gene_synonym=phdD;gene_synonym=yfhX;db_xref=EcoGene:EG13459 EMBL CDS 2671225 2672037 . + 0 ID=.5538;gene=hcaB;locus_tag=b2541;gene_synonym=ECK2538;gene_synonym=JW2525;gene_synonym=phdD;gene_synonym=yfhX;ec_number=1.3.1.-;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=2%2C3-dihydroxy-2%2C3-dihydrophenylpropionate dehydrogenase;protein_id=AAC75594.1;db_xref=GI:1788891;db_xref=ASAP:ABE-0008361;db_xref=UniProtKB/Swiss-Prot:P0CI31;db_xref=EcoGene:EG13459 EMBL gene 2672047 2673249 . + . ID=.5539;gene=hcaD;locus_tag=b2542;gene_synonym=ECK2539;gene_synonym=hcaA4;gene_synonym=JW2526;gene_synonym=phdA;gene_synonym=yfhY;db_xref=EcoGene:EG13460 EMBL CDS 2672047 2673249 . + 0 ID=.5540;gene=hcaD;locus_tag=b2542;gene_synonym=ECK2539;gene_synonym=hcaA4;gene_synonym=JW2526;gene_synonym=phdA;gene_synonym=yfhY;ec_number=1.18.1.3;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=ferredoxin reductase subunit of phenylpropionate dioxygenase%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=phenylpropionate dioxygenase%2C ferredoxin reductase subunit;protein_id=AAC75595.1;db_xref=GI:1788892;db_xref=ASAP:ABE-0008363;db_xref=UniProtKB/Swiss-Prot:P77650;db_xref=EcoGene:EG13460 EMBL gene 2673346 2673768 . + . ID=.5541;gene=yphA;locus_tag=b2543;gene_synonym=ECK2540;gene_synonym=JW2527;db_xref=EcoGene:EG13462 EMBL CDS 2673346 2673768 . + 0 ID=.5542;gene=yphA;locus_tag=b2543;gene_synonym=ECK2540;gene_synonym=JW2527;note=GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=DoxX family inner membrane protein;protein_id=AAC75596.2;db_xref=GI:145693171;db_xref=ASAP:ABE-0008365;db_xref=UniProtKB/Swiss-Prot:P0AD47;db_xref=EcoGene:EG13462 EMBL repeat_region 2673776 2673809 . + . ID=.5543;note=REP185 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 2673816 2674688 . - . ID=.5544;gene=yphB;locus_tag=b2544;gene_synonym=ECK2541;gene_synonym=JW2528;db_xref=EcoGene:EG13463 EMBL CDS 2673816 2674688 . - 0 ID=.5545;gene=yphB;locus_tag=b2544;gene_synonym=ECK2541;gene_synonym=JW2528;codon_start=1;transl_table=11;product=mutarotase superfamily protein%2C YphB family;protein_id=AAC75597.1;db_xref=GI:1788894;db_xref=ASAP:ABE-0008368;db_xref=UniProtKB/Swiss-Prot:P76584;db_xref=EcoGene:EG13463 EMBL gene 2674700 2675761 . - . ID=.5546;gene=yphC;locus_tag=b2545;gene_synonym=ECK2542;gene_synonym=JW5842;db_xref=EcoGene:EG13464 EMBL CDS 2674700 2675761 . - 0 ID=.5547;gene=yphC;locus_tag=b2545;gene_synonym=ECK2542;gene_synonym=JW5842;function=putative enzyme%3B Not classified;note=putative oxidoreductase;codon_start=1;transl_table=11;product=putative Zn-dependent NAD(P)-binding oxidoreductase;protein_id=AAC75598.2;db_xref=GI:87082125;db_xref=ASAP:ABE-0008370;db_xref=UniProtKB/Swiss-Prot:P77360;db_xref=EcoGene:EG13464 EMBL gene 2675827 2676825 . - . ID=.5548;gene=yphD;locus_tag=b2546;gene_synonym=ECK2543;gene_synonym=JW2530;db_xref=EcoGene:EG13465 EMBL CDS 2675827 2676825 . - 0 ID=.5549;gene=yphD;locus_tag=b2546;gene_synonym=ECK2543;gene_synonym=JW2530;function=putative transport%3B Not classified;note=putative transport system permease protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative sugar ABC transporter permease;protein_id=AAC75599.1;db_xref=GI:1788896;db_xref=ASAP:ABE-0008373;db_xref=UniProtKB/Swiss-Prot:P77315;db_xref=EcoGene:EG13465 EMBL gene 2676850 2678361 . - . ID=.5550;gene=yphE;locus_tag=b2547;gene_synonym=ECK2544;gene_synonym=JW2531;db_xref=EcoGene:EG13466 EMBL CDS 2676850 2678361 . - 0 ID=.5551;gene=yphE;locus_tag=b2547;gene_synonym=ECK2544;gene_synonym=JW2531;function=putative transport%3B Not classified;note=putative ATP-binding component of a transport system%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=putative sugar ABC transporter ATPase;protein_id=AAC75600.1;db_xref=GI:1788897;db_xref=ASAP:ABE-0008376;db_xref=UniProtKB/Swiss-Prot:P77509;db_xref=EcoGene:EG13466 EMBL gene 2678384 2679367 . - . ID=.5552;gene=yphF;locus_tag=b2548;gene_synonym=ECK2545;gene_synonym=JW2532;db_xref=EcoGene:EG13467 EMBL CDS 2678384 2679367 . - 0 ID=.5553;gene=yphF;locus_tag=b2548;gene_synonym=ECK2545;gene_synonym=JW2532;function=putative regulator%3B Not classified;note=putative LACI-type transcriptional regulator%3B GO_component: GO:0042597 - periplasmic space;codon_start=1;transl_table=11;product=putative sugar ABC transporter periplasmic binding protein;protein_id=AAC75601.1;db_xref=GI:1788898;db_xref=ASAP:ABE-0008378;db_xref=UniProtKB/Swiss-Prot:P77269;db_xref=EcoGene:EG13467 EMBL gene 2679464 2682745 . - . ID=.5554;gene=yphG;locus_tag=b2549;gene_synonym=ECK2546;gene_synonym=JW5405;db_xref=EcoGene:EG13468 EMBL CDS 2679464 2682745 . - 0 ID=.5555;gene=yphG;locus_tag=b2549;gene_synonym=ECK2546;gene_synonym=JW5405;codon_start=1;transl_table=11;product=DUF4380 domain-containing TPR repeat protein;protein_id=AAC75602.2;db_xref=GI:87082126;db_xref=ASAP:ABE-0008380;db_xref=UniProtKB/Swiss-Prot:P76585;db_xref=EcoGene:EG13468 EMBL gene 2682863 2684056 . + . ID=.5556;gene=yphH;locus_tag=b2550;gene_synonym=ECK2547;gene_synonym=JW5406;db_xref=EcoGene:EG13469 EMBL CDS 2682863 2684056 . + 0 ID=.5557;gene=yphH;locus_tag=b2550;gene_synonym=ECK2547;gene_synonym=JW5406;function=putative regulator%3B Not classified;note=putative NAGC-like transcriptional regulator%3B GO_process: GO:0006355 - regulation of transcription%2C DNA-dependent;codon_start=1;transl_table=11;product=putative DNA-binding transcriptional regulator;protein_id=AAC75603.2;db_xref=GI:87082127;db_xref=ASAP:ABE-0008384;db_xref=UniProtKB/Swiss-Prot:P76586;db_xref=EcoGene:EG13469 EMBL repeat_region 2684117 2684214 . + . ID=.5558;note=RIP186 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 2684254 2685507 . - . ID=.5559;gene=glyA;locus_tag=b2551;gene_synonym=ECK2548;gene_synonym=JW2535;db_xref=EcoGene:EG10408 EMBL CDS 2684254 2685507 . - 0 ID=.5560;gene=glyA;locus_tag=b2551;gene_synonym=ECK2548;gene_synonym=JW2535;ec_number=2.1.2.1;function=enzyme%3B Amino acid biosynthesis: Glycine;experiment=N-terminus verified by Edman degradation: PMID 2034230%2C9119048%2C9298646%2C9740056%2C10972807;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009063 - cellular amino acid catabolic process%3B GO_process: GO:0006545 - glycine biosynthetic process%3B GO_process: GO:0046656 - folic acid biosynthetic process;codon_start=1;transl_table=11;product=serine hydroxymethyltransferase;protein_id=AAC75604.1;db_xref=GI:1788902;db_xref=ASAP:ABE-0008389;db_xref=UniProtKB/Swiss-Prot:P0A825;db_xref=EcoGene:EG10408 EMBL gene 2685835 2687025 . + . ID=.5561;gene=hmp;locus_tag=b2552;gene_synonym=ECK2549;gene_synonym=fsrB;gene_synonym=hmpA;gene_synonym=JW2536;db_xref=EcoGene:EG10456 EMBL CDS 2685835 2687025 . + 0 ID=.5562;gene=hmp;locus_tag=b2552;gene_synonym=ECK2549;gene_synonym=fsrB;gene_synonym=hmpA;gene_synonym=JW2536;ec_number=1.14.12.1;ec_number=1.5.1.34;function=enzyme%3B Energy metabolism%2C carbon: Electron transport;experiment=N-terminus verified by Edman degradation: PMID 1601132%2C2034230%2C9298646%2C9724711;note=dihydropteridine reductase%2C ferrisiderophore reductase activity;codon_start=1;transl_table=11;product=fused nitric oxide dioxygenase/dihydropteridine reductase 2;protein_id=AAC75605.1;db_xref=GI:1788903;db_xref=ASAP:ABE-0008396;db_xref=UniProtKB/Swiss-Prot:P24232;db_xref=EcoGene:EG10456 EMBL repeat_region 2687035 2687054 . + . ID=.5563;note=REP187 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 2687070 2687408 . - . ID=.5564;gene=glnB;locus_tag=b2553;gene_synonym=ECK2550;gene_synonym=JW2537;db_xref=EcoGene:EG10384 EMBL CDS 2687070 2687408 . - 0 ID=.5565;gene=glnB;locus_tag=b2553;gene_synonym=ECK2550;gene_synonym=JW2537;function=regulator%3B Amino acid biosynthesis: Glutamine;experiment=N-terminus verified by Edman degradation: PMID 8293810;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006542 - glutamine biosynthetic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=regulatory protein P-II for glutamine synthetase;protein_id=AAC75606.1;db_xref=GI:1788904;db_xref=ASAP:ABE-0008398;db_xref=UniProtKB/Swiss-Prot:P0A9Z1;db_xref=EcoGene:EG10384 EMBL gene 2687469 2688803 . - . ID=.5566;gene=glrR;locus_tag=b2554;gene_synonym=ECK2551;gene_synonym=JW2538;gene_synonym=qseF;gene_synonym=yfhA;db_xref=EcoGene:EG11285 EMBL CDS 2687469 2688803 . - 0 ID=.5567;gene=glrR;locus_tag=b2554;gene_synonym=ECK2551;gene_synonym=JW2538;gene_synonym=qseF;gene_synonym=yfhA;function=putative regulator%3B Not classified;note=putative 2-component transcriptional regulator%3B GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=response regulator regulating glmY sRNA in two-component system with sensor protein GlrK;protein_id=AAC75607.1;db_xref=GI:1788905;db_xref=ASAP:ABE-0008400;db_xref=UniProtKB/Swiss-Prot:P0AFU4;db_xref=EcoGene:EG11285 EMBL gene 2688793 2689506 . - . ID=.5568;gene=yfhG;locus_tag=b2555;gene_synonym=ECK2552;gene_synonym=JW2539;gene_synonym=qseG;db_xref=EcoGene:EG12139 EMBL CDS 2688793 2689506 . - 0 ID=.5569;gene=yfhG;locus_tag=b2555;gene_synonym=ECK2552;gene_synonym=JW2539;gene_synonym=qseG;function=phenotype%3B Not classified;note=putative alpha helix protein;codon_start=1;transl_table=11;product=putative outer membrane protein modulating the QseEF response;protein_id=AAC75608.1;db_xref=GI:1788906;db_xref=ASAP:ABE-0008405;db_xref=UniProtKB/Swiss-Prot:P0AD44;db_xref=EcoGene:EG12139 EMBL gene 2689671 2691098 . - . ID=.5570;gene=glrK;locus_tag=b2556;gene_synonym=ECK2553;gene_synonym=JW5407;gene_synonym=qseE;gene_synonym=yfhK;gene_synonym=yfhZ;db_xref=EcoGene:EG13461 EMBL CDS 2689671 2691098 . - 0 ID=.5571;gene=glrK;locus_tag=b2556;gene_synonym=ECK2553;gene_synonym=JW5407;gene_synonym=qseE;gene_synonym=yfhK;gene_synonym=yfhZ;function=putative regulator%3B Not classified;note=putative 2-component sensor protein%3B GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=sensor protein kinase regulating glmY sRNA in two-component system with response regulator GlrR;protein_id=AAC75609.2;db_xref=GI:87082128;db_xref=ASAP:ABE-0008409;db_xref=UniProtKB/Swiss-Prot:P52101;db_xref=EcoGene:EG13461 EMBL gene 2691157 2691340 . - . ID=.5572;gene=glmY;locus_tag=b4441;gene_synonym=ECK2554;gene_synonym=JWR0245;gene_synonym=sroF;gene_synonym=tke1;db_xref=EcoGene:EG31155 EMBL ncRNA 2691157 2691340 . - . ID=.5573;ncrna_class=other;gene=glmY;locus_tag=b4441;gene_synonym=ECK2554;gene_synonym=JWR0245;gene_synonym=sroF;gene_synonym=tke1;product=sRNA activator of glmS mRNA%2C glmZ processing antagonist;note=identified in a large scale screen;db_xref=ASAP:ABE-0047261;db_xref=EcoGene:EG31155 EMBL gene 2691656 2695543 . - . ID=.5574;gene=purL;locus_tag=b2557;gene_synonym=ECK2555;gene_synonym=JW2541;gene_synonym=purG;gene_synonym=purI;db_xref=EcoGene:EG10797 EMBL CDS 2691656 2695543 . - 0 ID=.5575;gene=purL;locus_tag=b2557;gene_synonym=ECK2555;gene_synonym=JW2541;gene_synonym=purG;gene_synonym=purI;ec_number=6.3.5.3;function=enzyme%3B Purine ribonucleotide biosynthesis;experiment=N-terminus verified by Edman degradation: PMID 2659070;note=phosphoribosylformyl-glycineamide synthetase %3D FGAM synthetase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006164 - purine nucleotide biosynthetic process;codon_start=1;transl_table=11;product=phosphoribosylformyl-glycineamide synthetase;protein_id=AAT48143.1;db_xref=GI:48994899;db_xref=ASAP:ABE-0008412;db_xref=UniProtKB/Swiss-Prot:P15254;db_xref=EcoGene:EG10797 EMBL gene 2695801 2697357 . + . ID=.5576;gene=mltF;locus_tag=b2558;gene_synonym=ECK2556;gene_synonym=JW2542;gene_synonym=yfhD;db_xref=EcoGene:EG11373 EMBL CDS 2695801 2697357 . + 0 ID=.5577;gene=mltF;locus_tag=b2558;gene_synonym=ECK2556;gene_synonym=JW2542;gene_synonym=yfhD;function=enzyme%3B Transporter%3B Not classified;note=putative periplasmic binding transport protein%3B GO_component: GO:0042597 - periplasmic space;codon_start=1;transl_table=11;product=membrane-bound lytic transglycosylase F%2C murein hydrolase;protein_id=AAC75611.2;db_xref=GI:171474010;db_xref=ASAP:ABE-0008417;db_xref=UniProtKB/Swiss-Prot:P0AGC5;db_xref=EcoGene:EG11373 EMBL gene 2697354 2697857 . - . ID=.5578;gene=tadA;locus_tag=b2559;gene_synonym=ECK2557;gene_synonym=JW2543;gene_synonym=yfhC;db_xref=EcoGene:EG11372 EMBL CDS 2697354 2697857 . - 0 ID=.5579;gene=tadA;locus_tag=b2559;gene_synonym=ECK2557;gene_synonym=JW2543;gene_synonym=yfhC;ec_number=3.5.4.-;function=enzyme%3B tRNA modification;note=GO_process: GO:0009451 - RNA modification;codon_start=1;transl_table=11;product=tRNA-specific adenosine deaminase;protein_id=AAC75612.2;db_xref=GI:145693172;db_xref=ASAP:ABE-0008419;db_xref=UniProtKB/Swiss-Prot:P68398;db_xref=EcoGene:EG11372 EMBL gene 2697915 2698550 . - . ID=.5580;gene=pgpC;locus_tag=b2560;gene_synonym=ECK2558;gene_synonym=JW5408;gene_synonym=yfhB;db_xref=EcoGene:EG11371 EMBL CDS 2697915 2698550 . - 0 ID=.5581;gene=pgpC;locus_tag=b2560;gene_synonym=ECK2558;gene_synonym=JW5408;gene_synonym=yfhB;function=enzyme%3B Macromolecule synthesis%2C modification: Phospholipids;codon_start=1;transl_table=11;product=phosphatidylglycerophosphatase C%2C membrane bound;protein_id=AAC75613.2;db_xref=GI:87082129;db_xref=ASAP:ABE-0008421;db_xref=UniProtKB/Swiss-Prot:P0AD42;db_xref=EcoGene:EG11371 EMBL gene 2698759 2699607 . + . ID=.5582;gene=yfhH;locus_tag=b2561;gene_synonym=ECK2559;gene_synonym=JW2545;db_xref=EcoGene:EG12308 EMBL CDS 2698759 2699607 . + 0 ID=.5583;gene=yfhH;locus_tag=b2561;gene_synonym=ECK2559;gene_synonym=JW2545;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative DNA-binding transcriptional regulator;protein_id=AAC75614.2;db_xref=GI:87082130;db_xref=ASAP:ABE-0008428;db_xref=UniProtKB/Swiss-Prot:P37767;db_xref=EcoGene:EG12308 EMBL gene 2699663 2699923 . + . ID=.5584;gene=yfhL;locus_tag=b2562;gene_synonym=ECK2560;gene_synonym=JW2546;db_xref=EcoGene:EG13215 EMBL CDS 2699663 2699923 . + 0 ID=.5585;gene=yfhL;locus_tag=b2562;gene_synonym=ECK2560;gene_synonym=JW2546;note=GO_function: GO:0009055 - electron carrier activity;codon_start=1;transl_table=11;product=putative 4Fe-4S cluster-containing protein;protein_id=AAC75615.1;db_xref=GI:1788914;db_xref=ASAP:ABE-0008431;db_xref=UniProtKB/Swiss-Prot:P52102;db_xref=EcoGene:EG13215 EMBL gene 2700117 2700197 . - . ID=.5586;gene=shoB;locus_tag=b4687;gene_synonym=ECK4502;gene_synonym=ryfB;gene_synonym=yphI;db_xref=EcoGene:EG14494 EMBL CDS 2700117 2700197 . - 0 ID=.5587;gene=shoB;locus_tag=b4687;gene_synonym=ECK4502;gene_synonym=ryfB;gene_synonym=yphI;codon_start=1;transl_table=11;product=toxic membrane protein;protein_id=ACO60003.1;db_xref=GI:226510966;db_xref=UniProtKB/Swiss-Prot:C1P611;db_xref=EcoGene:EG14494 EMBL gene 2700520 2700596 . + . ID=.5588;gene=ohsC;locus_tag=b4608;gene_synonym=ECK4417;gene_synonym=ryfC;db_xref=EcoGene:EG31178 EMBL ncRNA 2700520 2700596 . + . ID=.5589;ncrna_class=antisense_RNA;gene=ohsC;locus_tag=b4608;gene_synonym=ECK4417;gene_synonym=ryfC;product=sRNA antisense regulator of shoB toxin;db_xref=EcoGene:EG31178 EMBL gene 2700618 2700998 . - . ID=.5590;gene=acpS;locus_tag=b2563;gene_synonym=dpj;gene_synonym=ECK2561;gene_synonym=JW2547;db_xref=EcoGene:EG10247 EMBL CDS 2700618 2700998 . - 0 ID=.5591;gene=acpS;locus_tag=b2563;gene_synonym=dpj;gene_synonym=ECK2561;gene_synonym=JW2547;ec_number=2.7.8.7;function=enzyme%3B Fatty acid and phosphatidic acid biosynthesis;note=CoA:apo-[acyl-carrier-protein] pantetheinephosphotransferase%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=holo-[acyl-carrier-protein] synthase 1;protein_id=AAC75616.1;db_xref=GI:1788916;db_xref=ASAP:ABE-0008433;db_xref=UniProtKB/Swiss-Prot:P24224;db_xref=EcoGene:EG10247 EMBL gene 2700998 2701729 . - . ID=.5592;gene=pdxJ;locus_tag=b2564;gene_synonym=ECK2562;gene_synonym=JW2548;db_xref=EcoGene:EG10693 EMBL CDS 2700998 2701729 . - 0 ID=.5593;gene=pdxJ;locus_tag=b2564;gene_synonym=ECK2562;gene_synonym=JW2548;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Pyridoxine;note=pyridoxine biosynthesis%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0008615 - pyridoxine biosynthetic process;codon_start=1;transl_table=11;product=pyridoxine 5'-phosphate synthase;protein_id=AAC75617.1;db_xref=GI:1788917;db_xref=ASAP:ABE-0008435;db_xref=UniProtKB/Swiss-Prot:P0A794;db_xref=EcoGene:EG10693 EMBL gene 2701741 2702469 . - . ID=.5594;gene=recO;locus_tag=b2565;gene_synonym=ECK2563;gene_synonym=JW2549;db_xref=EcoGene:EG10832 EMBL CDS 2701741 2702469 . - 0 ID=.5595;gene=recO;locus_tag=b2565;gene_synonym=ECK2563;gene_synonym=JW2549;function=regulator%3B DNA - replication%2C repair%2C restriction/modification;note=protein interacts with RecR and possibly RecF proteins%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006281 - DNA repair%3B GO_process: GO:0006310 - DNA recombination;codon_start=1;transl_table=11;product=gap repair protein;protein_id=AAC75618.1;db_xref=GI:2367140;db_xref=ASAP:ABE-0008438;db_xref=UniProtKB/Swiss-Prot:P0A7H3;db_xref=EcoGene:EG10832 EMBL gene 2702481 2703386 . - . ID=.5596;gene=era;locus_tag=b2566;gene_synonym=ECK2564;gene_synonym=JW2550;gene_synonym=sdgE;db_xref=EcoGene:EG10270 EMBL CDS 2702481 2703386 . - 0 ID=.5597;gene=era;locus_tag=b2566;gene_synonym=ECK2564;gene_synonym=JW2550;gene_synonym=sdgE;function=factor%3B Global regulatory functions;note=GTP-binding protein%3B GO_process: GO:0007049 - cell cycle;codon_start=1;transl_table=11;product=membrane-associated%2C 16S rRNA-binding GTPase;protein_id=AAC75619.1;db_xref=GI:1788919;db_xref=ASAP:ABE-0008440;db_xref=UniProtKB/Swiss-Prot:P06616;db_xref=EcoGene:EG10270 EMBL gene 2703383 2704063 . - . ID=.5598;gene=rnc;locus_tag=b2567;gene_synonym=ECK2565;gene_synonym=JW2551;gene_synonym=ranA;db_xref=EcoGene:EG10857 EMBL CDS 2703383 2704063 . - 0 ID=.5599;gene=rnc;locus_tag=b2567;gene_synonym=ECK2565;gene_synonym=JW2551;gene_synonym=ranA;ec_number=3.1.26.3;function=enzyme%3B Degradation of RNA;experiment=N-terminus verified by Edman degradation: PMID 2105934;note=RNase III%2C ds RNA%3B GO_process: GO:0006401 - RNA catabolic process;codon_start=1;transl_table=11;product=RNase III;protein_id=AAC75620.1;db_xref=GI:1788920;db_xref=ASAP:ABE-0008448;db_xref=UniProtKB/Swiss-Prot:P0A7Y0;db_xref=EcoGene:EG10857 EMBL gene 2704335 2705309 . - . ID=.5600;gene=lepB;locus_tag=b2568;gene_synonym=ECK2566;gene_synonym=JW2552;gene_synonym=lep;db_xref=EcoGene:EG10530 EMBL CDS 2704335 2705309 . - 0 ID=.5601;gene=lepB;locus_tag=b2568;gene_synonym=ECK2566;gene_synonym=JW2552;gene_synonym=lep;ec_number=3.4.21.89;function=enzyme%3B Protein%2C peptide secretion;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=leader peptidase (signal peptidase I);protein_id=AAC75621.1;db_xref=GI:1788921;db_xref=ASAP:ABE-0008450;db_xref=UniProtKB/Swiss-Prot:P00803;db_xref=EcoGene:EG10530 EMBL gene 2705325 2707124 . - . ID=.5602;gene=lepA;locus_tag=b2569;gene_synonym=ECK2567;gene_synonym=JW2553;db_xref=EcoGene:EG10529 EMBL CDS 2705325 2707124 . - 0 ID=.5603;gene=lepA;locus_tag=b2569;gene_synonym=ECK2567;gene_synonym=JW2553;function=factor%3B Proteins - translation and modification;note=GTP-binding elongation factor%2C may be inner membrane protein%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=back-translocating elongation factor EF4%2C GTPase;protein_id=AAC75622.1;db_xref=GI:1788922;db_xref=ASAP:ABE-0008452;db_xref=UniProtKB/Swiss-Prot:P60785;db_xref=EcoGene:EG10529 EMBL gene 2707322 2707801 . - . ID=.5604;gene=rseC;locus_tag=b2570;gene_synonym=ECK2568;gene_synonym=JW2554;db_xref=EcoGene:EG13178 EMBL CDS 2707322 2707801 . - 0 ID=.5605;gene=rseC;locus_tag=b2570;gene_synonym=ECK2568;gene_synonym=JW2554;function=regulator%3B Global regulatory functions;note=sigma-E factor%2C negative regulatory protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006350 - transcription%3B GO_process: GO:0042594 - response to starvation;codon_start=1;transl_table=11;product=SoxR iron-sulfur cluster reduction factor component;protein_id=AAC75623.1;db_xref=GI:1788923;db_xref=ASAP:ABE-0008457;db_xref=UniProtKB/Swiss-Prot:P46187;db_xref=EcoGene:EG13178 EMBL gene 2707798 2708754 . - . ID=.5606;gene=rseB;locus_tag=b2571;gene_synonym=ECK2569;gene_synonym=JW2555;db_xref=EcoGene:EG13177 EMBL CDS 2707798 2708754 . - 0 ID=.5607;gene=rseB;locus_tag=b2571;gene_synonym=ECK2569;gene_synonym=JW2555;function=regulator%3B Global regulatory functions;note=regulates activity of sigma-E factor%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006350 - transcription%3B GO_process: GO:0042594 - response to starvation;codon_start=1;transl_table=11;product=anti-sigma E factor%2C binds RseA;protein_id=AAC75624.1;db_xref=GI:1788924;db_xref=ASAP:ABE-0008459;db_xref=UniProtKB/Swiss-Prot:P0AFX9;db_xref=EcoGene:EG13177 EMBL gene 2708754 2709404 . - . ID=.5608;gene=rseA;locus_tag=b2572;gene_synonym=ECK2570;gene_synonym=JW2556;gene_synonym=mclA;gene_synonym=yfiJ;db_xref=EcoGene:EG12341 EMBL CDS 2708754 2709404 . - 0 ID=.5609;gene=rseA;locus_tag=b2572;gene_synonym=ECK2570;gene_synonym=JW2556;gene_synonym=mclA;gene_synonym=yfiJ;function=regulator%3B Global regulatory functions;note=sigma-E factor%2C negative regulatory protein%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006350 - transcription%3B GO_process: GO:0009266 - response to temperature stimulus;codon_start=1;transl_table=11;product=anti-sigma factor;protein_id=AAC75625.1;db_xref=GI:1788925;db_xref=ASAP:ABE-0008462;db_xref=UniProtKB/Swiss-Prot:P0AFX7;db_xref=EcoGene:EG12341 EMBL gene 2709437 2710012 . - . ID=.5610;gene=rpoE;locus_tag=b2573;gene_synonym=ECK2571;gene_synonym=JW2557;gene_synonym=sigE;db_xref=EcoGene:EG11897 EMBL CDS 2709437 2710012 . - 0 ID=.5611;gene=rpoE;locus_tag=b2573;gene_synonym=ECK2571;gene_synonym=JW2557;gene_synonym=sigE;function=regulator%3B Global regulatory functions;note=RNA polymerase%2C sigma-E factor%3B heat shock and oxidative stress%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006350 - transcription%3B GO_process: GO:0009266 - response to temperature stimulus;codon_start=1;transl_table=11;product=RNA polymerase sigma E factor;protein_id=AAC75626.1;db_xref=GI:1788926;db_xref=ASAP:ABE-0008467;db_xref=UniProtKB/Swiss-Prot:P0AGB6;db_xref=EcoGene:EG11897 EMBL gene 2710420 2712042 . + . ID=.5612;gene=nadB;locus_tag=b2574;gene_synonym=ECK2572;gene_synonym=JW2558;gene_synonym=nic;gene_synonym=nicB;db_xref=EcoGene:EG10631 EMBL CDS 2710420 2712042 . + 0 ID=.5613;gene=nadB;locus_tag=b2574;gene_synonym=ECK2572;gene_synonym=JW2558;gene_synonym=nic;gene_synonym=nicB;ec_number=1.4.3.16;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Pyridine nucleotide;experiment=N-terminus verified by Edman degradation: PMID 2187483%2C2841129;note=quinolinate synthetase%2C B protein%3B GO_process: GO:0009435 - NAD biosynthetic process;codon_start=1;transl_table=11;product=quinolinate synthase%2C L-aspartate oxidase (B protein) subunit;protein_id=AAC75627.1;db_xref=GI:1788928;db_xref=ASAP:ABE-0008471;db_xref=UniProtKB/Swiss-Prot:P10902;db_xref=EcoGene:EG10631 EMBL gene 2712027 2712764 . - . ID=.5614;gene=trmN;locus_tag=b2575;gene_synonym=ECK2573;gene_synonym=JW2559;gene_synonym=trmN6;gene_synonym=yfiC;db_xref=EcoGene:EG11538 EMBL CDS 2712027 2712764 . - 0 ID=.5615;gene=trmN;locus_tag=b2575;gene_synonym=ECK2573;gene_synonym=JW2559;gene_synonym=trmN6;gene_synonym=yfiC;ec_number=2.1.1.223;function=enzyme%3B tRNA modification;note=putative enzyme;codon_start=1;transl_table=11;product=tRNA1(Val) (adenine(37)-N6)-methyltransferase;protein_id=AAC75628.2;db_xref=GI:87082131;db_xref=ASAP:ABE-0008473;db_xref=UniProtKB/Swiss-Prot:P31825;db_xref=EcoGene:EG11538 EMBL gene 2712896 2714230 . + . ID=.5616;gene=srmB;locus_tag=b2576;gene_synonym=ECK2574;gene_synonym=JW2560;gene_synonym=rbaB;gene_synonym=rhlA;db_xref=EcoGene:EG10975 EMBL CDS 2712896 2714230 . + 0 ID=.5617;gene=srmB;locus_tag=b2576;gene_synonym=ECK2574;gene_synonym=JW2560;gene_synonym=rbaB;gene_synonym=rhlA;ec_number=2.7.7.-;function=enzyme%3B RNA synthesis%2C modification%2C DNA transcription;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009451 - RNA modification;codon_start=1;transl_table=11;product=ATP-dependent RNA helicase;protein_id=AAC75629.1;db_xref=GI:1788930;db_xref=ASAP:ABE-0008478;db_xref=UniProtKB/Swiss-Prot:P21507;db_xref=EcoGene:EG10975 EMBL repeat_region 2714283 2714380 . + . ID=.5618;note=RIP188 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 2714439 2715320 . - . ID=.5619;gene=yfiE;locus_tag=b2577;gene_synonym=ECK2575;gene_synonym=JW2561;db_xref=EcoGene:EG11785 EMBL CDS 2714439 2715320 . - 0 ID=.5620;gene=yfiE;locus_tag=b2577;gene_synonym=ECK2575;gene_synonym=JW2561;function=putative regulator%3B Not classified;note=putative transcriptional regulator LYSR-type%3B GO_function: GO:0016563 - transcription activator activity%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=putative DNA-binding transcriptional regulator;protein_id=AAC75630.2;db_xref=GI:87082132;db_xref=ASAP:ABE-0008483;db_xref=UniProtKB/Swiss-Prot:P33634;db_xref=EcoGene:EG11785 EMBL gene 2715423 2716010 . + . ID=.5621;gene=eamB;locus_tag=b2578;gene_synonym=ECK2576;gene_synonym=JW2562;gene_synonym=yfiK;db_xref=EcoGene:EG12445 EMBL CDS 2715423 2716010 . + 0 ID=.5622;gene=eamB;locus_tag=b2578;gene_synonym=ECK2576;gene_synonym=JW2562;gene_synonym=yfiK;codon_start=1;transl_table=11;product=cysteine and O-acetylserine exporter;protein_id=AAC75631.1;db_xref=GI:1788932;db_xref=ASAP:ABE-0008487;db_xref=UniProtKB/Swiss-Prot:P38101;db_xref=EcoGene:EG12445 EMBL gene 2716066 2716449 . - . ID=.5623;gene=grcA;locus_tag=b2579;gene_synonym=ECK2577;gene_synonym=JW2563;gene_synonym=yfiD;db_xref=EcoGene:EG11784 EMBL CDS 2716066 2716449 . - 0 ID=.5624;gene=grcA;locus_tag=b2579;gene_synonym=ECK2577;gene_synonym=JW2563;gene_synonym=yfiD;function=putative enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;experiment=N-terminus verified by Edman degradation: PMID 9600841%2C9740056%2C9868784%2C10094700;note=putative formate acetyltransferase%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=autonomous glycyl radical cofactor;protein_id=AAC75632.1;db_xref=GI:1788933;db_xref=ASAP:ABE-0008489;db_xref=UniProtKB/Swiss-Prot:P68066;db_xref=EcoGene:EG11784 EMBL gene 2716754 2717443 . + . ID=.5625;gene=ung;locus_tag=b2580;gene_synonym=ECK2578;gene_synonym=JW2564;db_xref=EcoGene:EG11058 EMBL CDS 2716754 2717443 . + 0 ID=.5626;gene=ung;locus_tag=b2580;gene_synonym=ECK2578;gene_synonym=JW2564;ec_number=3.2.2.-;function=enzyme%3B DNA - replication%2C repair%2C restriction/modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006281 - DNA repair;codon_start=1;transl_table=11;product=uracil-DNA-glycosylase;protein_id=AAC75633.1;db_xref=GI:1788934;db_xref=ASAP:ABE-0008495;db_xref=UniProtKB/Swiss-Prot:P12295;db_xref=EcoGene:EG11058 EMBL repeat_region 2717458 2717483 . + . ID=.5627;note=REP189 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 2717491 2718528 . - . ID=.5628;gene=yfiF;locus_tag=b2581;gene_synonym=ECK2579;gene_synonym=JW2565;db_xref=EcoGene:EG11786 EMBL CDS 2717491 2718528 . - 0 ID=.5629;gene=yfiF;locus_tag=b2581;gene_synonym=ECK2579;gene_synonym=JW2565;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009451 - RNA modification;codon_start=1;transl_table=11;product=putative methyltransferase;protein_id=AAC75634.1;db_xref=GI:1788935;db_xref=ASAP:ABE-0008497;db_xref=UniProtKB/Swiss-Prot:P0AGJ5;db_xref=EcoGene:EG11786 EMBL gene 2718735 2719154 . + . ID=.5630;gene=trxC;locus_tag=b2582;gene_synonym=ECK2580;gene_synonym=JW2566;gene_synonym=yfiG;db_xref=EcoGene:EG11887 EMBL CDS 2718735 2719154 . + 0 ID=.5631;gene=trxC;locus_tag=b2582;gene_synonym=ECK2580;gene_synonym=JW2566;gene_synonym=yfiG;ec_number=1.8.1.8;function=putative enzyme%3B Not classified;note=putative thioredoxin-like protein;codon_start=1;transl_table=11;product=thioredoxin 2;protein_id=AAC75635.1;db_xref=GI:1788936;db_xref=ASAP:ABE-0008501;db_xref=UniProtKB/Swiss-Prot:P0AGG4;db_xref=EcoGene:EG11887 EMBL gene 2719223 2719921 . + . ID=.5632;gene=yfiP;locus_tag=b2583;gene_synonym=ECK2581;gene_synonym=JW5409;db_xref=EcoGene:EG14223 EMBL CDS 2719223 2719921 . + 0 ID=.5633;gene=yfiP;locus_tag=b2583;gene_synonym=ECK2581;gene_synonym=JW5409;codon_start=1;transl_table=11;product=DTW domain protein;protein_id=AAC75636.2;db_xref=GI:87082133;db_xref=ASAP:ABE-0008503;db_xref=UniProtKB/Swiss-Prot:Q47319;db_xref=EcoGene:EG14223 EMBL gene 2719953 2722613 . + . ID=.5634;gene=pka;locus_tag=b2584;gene_synonym=ECK2582;gene_synonym=JW2568;gene_synonym=pat;gene_synonym=patZ;gene_synonym=yfiQ;db_xref=EcoGene:EG14224 EMBL CDS 2719953 2722613 . + 0 ID=.5635;gene=pka;locus_tag=b2584;gene_synonym=ECK2582;gene_synonym=JW2568;gene_synonym=pat;gene_synonym=patZ;gene_synonym=yfiQ;function=enzyme%3B Proteins - translation and modification;codon_start=1;transl_table=11;product=protein lysine acetyltransferase;protein_id=AAC75637.1;db_xref=GI:1788938;db_xref=ASAP:ABE-0008506;db_xref=UniProtKB/Swiss-Prot:P76594;db_xref=EcoGene:EG14224 EMBL gene 2722727 2724082 . + . ID=.5636;gene=pssA;locus_tag=b2585;gene_synonym=ECK2583;gene_synonym=JW2569;gene_synonym=pss;db_xref=EcoGene:EG10781 EMBL CDS 2722727 2724082 . + 0 ID=.5637;gene=pssA;locus_tag=b2585;gene_synonym=ECK2583;gene_synonym=JW2569;gene_synonym=pss;ec_number=2.7.8.8;function=enzyme%3B Macromolecule synthesis%2C modification: Phospholipids;experiment=N-terminus verified by Edman degradation: PMID 2002065;note=phosphatidylserine synthase%3B phospholipid synthesis%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0008654 - phospholipid biosynthetic process;codon_start=1;transl_table=11;product=phosphatidylserine synthase%3B CDP-diacylglycerol-serine O-phosphatidyltransferase;protein_id=AAC75638.2;db_xref=GI:87082134;db_xref=ASAP:ABE-0008510;db_xref=UniProtKB/Swiss-Prot:P23830;db_xref=EcoGene:EG10781 EMBL gene 2724128 2724451 . + . ID=.5638;gene=yfiM;locus_tag=b2586;gene_synonym=ECK2584;gene_synonym=JW2570;db_xref=EcoGene:EG12857 EMBL CDS 2724128 2724451 . + 0 ID=.5639;gene=yfiM;locus_tag=b2586;gene_synonym=ECK2584;gene_synonym=JW2570;codon_start=1;transl_table=11;product=putative lipoprotein;protein_id=AAC75639.2;db_xref=GI:145693173;db_xref=ASAP:ABE-0008513;db_xref=UniProtKB/Swiss-Prot:P46126;db_xref=EcoGene:EG12857 EMBL gene 2724448 2725746 . - . ID=.5640;gene=kgtP;locus_tag=b2587;gene_synonym=ECK2585;gene_synonym=JW2571;gene_synonym=witA;db_xref=EcoGene:EG10522 EMBL CDS 2724448 2725746 . - 0 ID=.5641;gene=kgtP;locus_tag=b2587;gene_synonym=ECK2585;gene_synonym=JW2571;gene_synonym=witA;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=alpha-ketoglutarate permease%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=alpha-ketoglutarate transporter;protein_id=AAC75640.1;db_xref=GI:1788942;db_xref=ASAP:ABE-0008515;db_xref=UniProtKB/Swiss-Prot:P0AEX3;db_xref=EcoGene:EG10522 EMBL gene 2726069 2726188 . - . ID=.5642;gene=rrfG;locus_tag=b2588;gene_synonym=ECK2586;gene_synonym=JWR0051;db_xref=EcoGene:EG30075 EMBL rRNA 2726069 2726188 . - . ID=.5643;gene=rrfG;locus_tag=b2588;gene_synonym=ECK2586;gene_synonym=JWR0051;product=5S ribosomal RNA of rrnG operon;db_xref=ASAP:ABE-0008519;db_xref=EcoGene:EG30075 EMBL gene 2726281 2729184 . - . ID=.5644;gene=rrlG;locus_tag=b2589;gene_synonym=ECK2587;gene_synonym=JWR0052;db_xref=EcoGene:EG30082 EMBL rRNA 2726281 2729184 . - . ID=.5645;gene=rrlG;locus_tag=b2589;gene_synonym=ECK2587;gene_synonym=JWR0052;product=23S ribosomal RNA of rrnG operon;db_xref=ASAP:ABE-0008521;db_xref=EcoGene:EG30082 EMBL gene 2729369 2729444 . - . ID=.5646;gene=gltW;locus_tag=b2590;gene_synonym=ECK2588;gene_synonym=JWR0053;db_xref=EcoGene:EG30035 EMBL tRNA 2729369 2729444 . - . ID=.5647;gene=gltW;locus_tag=b2590;gene_synonym=ECK2588;gene_synonym=JWR0053;product=tRNA-Glu;note=anticodon: UUC;db_xref=ASAP:ABE-0008523;db_xref=EcoGene:EG30035 EMBL gene 2729616 2731157 . - . ID=.5648;gene=rrsG;locus_tag=b2591;gene_synonym=ECK2589;gene_synonym=JWR0054;db_xref=EcoGene:EG30089 EMBL rRNA 2729616 2731157 . - . ID=.5649;gene=rrsG;locus_tag=b2591;gene_synonym=ECK2589;gene_synonym=JWR0054;product=16S ribosomal RNA of rrnG operon;db_xref=ASAP:ABE-0008525;db_xref=EcoGene:EG30089 EMBL gene 2731600 2734173 . - . ID=.5650;gene=clpB;locus_tag=b2592;gene_synonym=ECK2590;gene_synonym=htpM;gene_synonym=JW2573;db_xref=EcoGene:EG10157 EMBL CDS 2731600 2734173 . - 0 ID=.5651;gene=clpB;locus_tag=b2592;gene_synonym=ECK2590;gene_synonym=htpM;gene_synonym=JW2573;function=putative enzyme%3B Degradation of proteins%2C peptides%2C glyco;experiment=N-terminus verified by Edman degradation: PMID 1953774;note=heat shock protein%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=protein disaggregation chaperone;protein_id=AAC75641.1;db_xref=GI:1788943;db_xref=ASAP:ABE-0008527;db_xref=UniProtKB/Swiss-Prot:P63284;db_xref=EcoGene:EG10157 EMBL gene 2734153 2734295 . - . ID=.5652;gene=ryfD;locus_tag=b4609;gene_synonym=ECK4418;db_xref=EcoGene:EG31179 EMBL ncRNA 2734153 2734295 . - . ID=.5653;ncrna_class=other;gene=ryfD;locus_tag=b4609;gene_synonym=ECK4418;product=novel sRNA%2C function unknown;db_xref=EcoGene:EG31179 EMBL gene 2734303 2735034 . - . ID=.5654;gene=yfiH;locus_tag=b2593;gene_synonym=ECK2591;gene_synonym=JW2575;db_xref=EcoGene:EG12097 EMBL CDS 2734303 2735034 . - 0 ID=.5655;gene=yfiH;locus_tag=b2593;gene_synonym=ECK2591;gene_synonym=JW2575;codon_start=1;transl_table=11;product=UPF0124 family protein;protein_id=AAC75642.1;db_xref=GI:1788945;db_xref=ASAP:ABE-0008530;db_xref=UniProtKB/Swiss-Prot:P33644;db_xref=EcoGene:EG12097 EMBL gene 2735031 2736011 . - . ID=.5656;gene=rluD;locus_tag=b2594;gene_synonym=ECK2592;gene_synonym=JW2576;gene_synonym=sfhB;gene_synonym=yfiI;db_xref=EcoGene:EG12098 EMBL CDS 2735031 2736011 . - 0 ID=.5657;gene=rluD;locus_tag=b2594;gene_synonym=ECK2592;gene_synonym=JW2576;gene_synonym=sfhB;gene_synonym=yfiI;ec_number=4.2.1.70;function=enzyme%3B rRNA modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009451 - RNA modification;codon_start=1;transl_table=11;product=23S rRNA pseudouridine(1911%2C1915%2C1917) synthase;protein_id=AAC75643.1;db_xref=GI:1788946;db_xref=ASAP:ABE-0008532;db_xref=UniProtKB/Swiss-Prot:P33643;db_xref=EcoGene:EG12098 EMBL gene 2736146 2736883 . + . ID=.5658;gene=bamD;locus_tag=b2595;gene_synonym=ecfD;gene_synonym=ECK2593;gene_synonym=JW2577;gene_synonym=yfiO;db_xref=EcoGene:EG14222 EMBL CDS 2736146 2736883 . + 0 ID=.5659;gene=bamD;locus_tag=b2595;gene_synonym=ecfD;gene_synonym=ECK2593;gene_synonym=JW2577;gene_synonym=yfiO;codon_start=1;transl_table=11;product=BamABCDE complex OM biogenesis lipoprotein;protein_id=AAC75644.1;db_xref=GI:1788947;db_xref=ASAP:ABE-0008536;db_xref=UniProtKB/Swiss-Prot:P0AC02;db_xref=EcoGene:EG14222 EMBL gene 2737154 2737495 . + . ID=.5660;gene=raiA;locus_tag=b2597;gene_synonym=ECK2594;gene_synonym=JW2578;gene_synonym=yfiA;db_xref=EcoGene:EG11151 EMBL CDS 2737154 2737495 . + 0 ID=.5661;gene=raiA;locus_tag=b2597;gene_synonym=ECK2594;gene_synonym=JW2578;gene_synonym=yfiA;function=putative regulator%3B Not classified;note=putative yhbH sigma 54 modulator%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=cold shock protein associated with 30S ribosomal subunit;protein_id=AAC75646.1;db_xref=GI:1788949;db_xref=ASAP:ABE-0008540;db_xref=UniProtKB/Swiss-Prot:P0AD49;db_xref=EcoGene:EG11151 EMBL gene 2737599 2737646 . + . ID=.5662;gene=pheL;locus_tag=b2598;gene_synonym=ECK2595;gene_synonym=JW2579;gene_synonym=pheAE;db_xref=EcoGene:EG11271 EMBL CDS 2737599 2737646 . + 0 ID=.5663;gene=pheL;locus_tag=b2598;gene_synonym=ECK2595;gene_synonym=JW2579;gene_synonym=pheAE;function=leader%3B Amino acid biosynthesis: Phenylalanine;note=leader peptide of chorismate mutase-P-prephenate dehydratase%3B GO_process: GO:0009094 - L-phenylalanine biosynthetic process;codon_start=1;transl_table=11;product=pheA gene leader peptide;protein_id=AAC75647.1;db_xref=GI:1788950;db_xref=ASAP:ABE-0008543;db_xref=UniProtKB/Swiss-Prot:P0AD72;db_xref=EcoGene:EG11271 EMBL gene 2737745 2738905 . + . ID=.5664;gene=pheA;locus_tag=b2599;gene_synonym=ECK2596;gene_synonym=JW2580;db_xref=EcoGene:EG10707 EMBL CDS 2737745 2738905 . + 0 ID=.5665;gene=pheA;locus_tag=b2599;gene_synonym=ECK2596;gene_synonym=JW2580;ec_number=4.2.1.51;ec_number=5.4.99.5;function=enzyme%3B Amino acid biosynthesis: Phenylalanine;note=chorismate mutase-P and prephenate dehydratase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009094 - L-phenylalanine biosynthetic process%3B GO_process: GO:0006571 - tyrosine biosynthetic process;codon_start=1;transl_table=11;product=chorismate mutase and prephenate dehydratase%2C P-protein;protein_id=AAC75648.1;db_xref=GI:1788951;db_xref=ASAP:ABE-0008545;db_xref=UniProtKB/Swiss-Prot:P0A9J8;db_xref=EcoGene:EG10707 EMBL repeat_region 2738915 2738938 . + . ID=.5666;note=REP190 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 2738948 2740069 . - . ID=.5667;gene=tyrA;locus_tag=b2600;gene_synonym=ECK2597;gene_synonym=JW2581;db_xref=EcoGene:EG11039 EMBL CDS 2738948 2740069 . - 0 ID=.5668;gene=tyrA;locus_tag=b2600;gene_synonym=ECK2597;gene_synonym=JW2581;ec_number=1.3.1.12;ec_number=5.4.99.5;function=enzyme%3B Amino acid biosynthesis: Tyrosine;note=chorismate mutase-T and prephenate dehydrogenase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009094 - L-phenylalanine biosynthetic process%3B GO_process: GO:0006571 - tyrosine biosynthetic process;codon_start=1;transl_table=11;product=fused chorismate mutase T/prephenate dehydrogenase;protein_id=AAC75649.1;db_xref=GI:1788952;db_xref=ASAP:ABE-0008547;db_xref=UniProtKB/Swiss-Prot:P07023;db_xref=EcoGene:EG11039 EMBL gene 2740080 2741150 . - . ID=.5669;gene=aroF;locus_tag=b2601;gene_synonym=ECK2598;gene_synonym=JW2582;db_xref=EcoGene:EG10078 EMBL CDS 2740080 2741150 . - 0 ID=.5670;gene=aroF;locus_tag=b2601;gene_synonym=ECK2598;gene_synonym=JW2582;ec_number=2.5.1.54;function=enzyme%3B Amino acid biosynthesis: Tyrosine;experiment=N-terminus verified by Edman degradation: PMID 6104668%2C6146618;note=3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase%2C tyrosine repressible)%3B GO_process: GO:0009423 - chorismate biosynthetic process;codon_start=1;transl_table=11;product=3-deoxy-D-arabino-heptulosonate-7-phosphate synthase%2C tyrosine-repressible;protein_id=AAC75650.1;db_xref=GI:1788953;db_xref=ASAP:ABE-0008549;db_xref=UniProtKB/Swiss-Prot:P00888;db_xref=EcoGene:EG10078 EMBL gene 2741360 2741725 . + . ID=.5671;gene=yfiL;locus_tag=b2602;gene_synonym=ECK2599;gene_synonym=JW5412;db_xref=EcoGene:EG12446 EMBL CDS 2741360 2741725 . + 0 ID=.5672;gene=yfiL;locus_tag=b2602;gene_synonym=ECK2599;gene_synonym=JW5412;codon_start=1;transl_table=11;product=lipoprotein;protein_id=AAC75651.2;db_xref=GI:87082135;db_xref=ASAP:ABE-0008565;db_xref=UniProtKB/Swiss-Prot:P11289;db_xref=EcoGene:EG12446 EMBL gene 2741875 2742393 . + . ID=.5673;gene=yfiR;locus_tag=b2603;gene_synonym=ECK2600;gene_synonym=JW2584;db_xref=EcoGene:EG14225 EMBL CDS 2741875 2742393 . + 0 ID=.5674;gene=yfiR;locus_tag=b2603;gene_synonym=ECK2600;gene_synonym=JW2584;codon_start=1;transl_table=11;product=putative periplasmic inhibitor of YfiN activity;protein_id=AAC75652.1;db_xref=GI:1788955;db_xref=ASAP:ABE-0008568;db_xref=UniProtKB/Swiss-Prot:P64548;db_xref=EcoGene:EG14225 EMBL gene 2742383 2743609 . + . ID=.5675;gene=yfiN;locus_tag=b2604;gene_synonym=ECK2601;gene_synonym=JW2585;db_xref=EcoGene:EG12880 EMBL CDS 2742383 2743609 . + 0 ID=.5676;gene=yfiN;locus_tag=b2604;gene_synonym=ECK2601;gene_synonym=JW2585;codon_start=1;transl_table=11;product=putative membrane-anchored diguanylate cyclase;protein_id=AAC75653.1;db_xref=GI:1788956;db_xref=ASAP:ABE-0008570;db_xref=UniProtKB/Swiss-Prot:P46139;db_xref=EcoGene:EG12880 EMBL gene 2743625 2744107 . + . ID=.5677;gene=yfiB;locus_tag=b2605;gene_synonym=ECK2602;gene_synonym=JW2586;db_xref=EcoGene:EG11152 EMBL CDS 2743625 2744107 . + 0 ID=.5678;gene=yfiB;locus_tag=b2605;gene_synonym=ECK2602;gene_synonym=JW2586;function=putative membrane%3B Not classified;note=putative outer membrane protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=OM lipoprotein putative positive effector of YfiN activity;protein_id=AAC75654.1;db_xref=GI:1788957;db_xref=ASAP:ABE-0008572;db_xref=UniProtKB/Swiss-Prot:P07021;db_xref=EcoGene:EG11152 EMBL gene 2744183 2744530 . - . ID=.5679;gene=rplS;locus_tag=b2606;gene_synonym=ECK2603;gene_synonym=JW2587;db_xref=EcoGene:EG10880 EMBL CDS 2744183 2744530 . - 0 ID=.5680;gene=rplS;locus_tag=b2606;gene_synonym=ECK2603;gene_synonym=JW2587;function=structural component%3B Ribosomal proteins - synthesis%2C modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0003735 - structural constituent of ribosome%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=50S ribosomal subunit protein L19;protein_id=AAC75655.1;db_xref=GI:1788958;db_xref=ASAP:ABE-0008574;db_xref=UniProtKB/Swiss-Prot:P0A7K6;db_xref=EcoGene:EG10880 EMBL gene 2744572 2745339 . - . ID=.5681;gene=trmD;locus_tag=b2607;gene_synonym=ECK2604;gene_synonym=JW2588;db_xref=EcoGene:EG11023 EMBL CDS 2744572 2745339 . - 0 ID=.5682;gene=trmD;locus_tag=b2607;gene_synonym=ECK2604;gene_synonym=JW2588;ec_number=2.1.1.228;function=enzyme%3B tRNA modification;experiment=N-terminus verified by Edman degradation: PMID 6337136;note=tRNA methyltransferase%3B tRNA (guanine-7-)-methyltransferase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009451 - RNA modification;codon_start=1;transl_table=11;product=tRNA m(1)G37 methyltransferase%2C SAM-dependent;protein_id=AAC75656.1;db_xref=GI:1788959;db_xref=ASAP:ABE-0008576;db_xref=UniProtKB/Swiss-Prot:P0A873;db_xref=EcoGene:EG11023 EMBL gene 2745370 2745918 . - . ID=.5683;gene=rimM;locus_tag=b2608;gene_synonym=ECK2605;gene_synonym=JW5413;gene_synonym=yfjA;db_xref=EcoGene:EG11153 EMBL CDS 2745370 2745918 . - 0 ID=.5684;gene=rimM;locus_tag=b2608;gene_synonym=ECK2605;gene_synonym=JW5413;gene_synonym=yfjA;function=enzyme%3B rRNA processing;note=GO_process: GO:0009451 - RNA modification;codon_start=1;transl_table=11;product=ribosome maturation factor;protein_id=AAC75657.2;db_xref=GI:87082136;db_xref=ASAP:ABE-0008579;db_xref=UniProtKB/Swiss-Prot:P0A7X6;db_xref=EcoGene:EG11153 EMBL gene 2745937 2746185 . - . ID=.5685;gene=rpsP;locus_tag=b2609;gene_synonym=ECK2606;gene_synonym=JW2590;db_xref=EcoGene:EG10915 EMBL CDS 2745937 2746185 . - 0 ID=.5686;gene=rpsP;locus_tag=b2609;gene_synonym=ECK2606;gene_synonym=JW2590;function=structural component%3B Ribosomal proteins - synthesis%2C modification;experiment=N-terminus verified by Edman degradation: PMID 336510%2C8730873%2C9298646;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0003735 - structural constituent of ribosome%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=30S ribosomal subunit protein S16;protein_id=AAC75658.1;db_xref=GI:1788961;db_xref=ASAP:ABE-0008583;db_xref=UniProtKB/Swiss-Prot:P0A7T3;db_xref=EcoGene:EG10915 EMBL gene 2746434 2747795 . - . ID=.5687;gene=ffh;locus_tag=b2610;gene_synonym=ECK2607;gene_synonym=JW5414;db_xref=EcoGene:EG10300 EMBL CDS 2746434 2747795 . - 0 ID=.5688;gene=ffh;locus_tag=b2610;gene_synonym=ECK2607;gene_synonym=JW5414;function=transport%3B Protein%2C peptide secretion;note=GTP-binding export factor binds to signal sequence%2C GTP and RNA;codon_start=1;transl_table=11;product=Signal Recognition Particle (SRP) component with 4.5S RNA (ffs);protein_id=AAC75659.1;db_xref=GI:1788963;db_xref=ASAP:ABE-0008586;db_xref=UniProtKB/Swiss-Prot:P0AGD7;db_xref=EcoGene:EG10300 EMBL gene 2747962 2748753 . + . ID=.5689;gene=ypjD;locus_tag=b2611;gene_synonym=corE;gene_synonym=ECK2608;gene_synonym=JW2592;db_xref=EcoGene:EG14226 EMBL CDS 2747962 2748753 . + 0 ID=.5690;gene=ypjD;locus_tag=b2611;gene_synonym=corE;gene_synonym=ECK2608;gene_synonym=JW2592;codon_start=1;transl_table=11;product=cytochrome c assembly protein family inner membrane protein;protein_id=AAC75660.2;db_xref=GI:145693174;db_xref=ASAP:ABE-0008591;db_xref=UniProtKB/Swiss-Prot:P64432;db_xref=EcoGene:EG14226 EMBL gene 2748774 2750060 . + . ID=.5691;gene=yfjD;locus_tag=b4461;gene_synonym=corB;gene_synonym=corF;gene_synonym=ECK2609;gene_synonym=JW5415;gene_synonym=ypjE;db_xref=EcoGene:EG12442 EMBL CDS 2748774 2750060 . + 0 ID=.5692;gene=yfjD;locus_tag=b4461;gene_synonym=corB;gene_synonym=corF;gene_synonym=ECK2609;gene_synonym=JW5415;gene_synonym=ypjE;note=putative membrane protein;codon_start=1;transl_table=11;product=UPF0053 family inner membrane protein;protein_id=AAT48144.3;db_xref=GI:145693175;db_xref=ASAP:ABE-0174111;db_xref=UniProtKB/Swiss-Prot:P37908;db_xref=EcoGene:EG12442 EMBL gene 2750115 2750708 . - . ID=.5693;gene=grpE;locus_tag=b2614;gene_synonym=ECK2610;gene_synonym=JW2594;db_xref=EcoGene:EG10416 EMBL CDS 2750115 2750708 . - 0 ID=.5694;gene=grpE;locus_tag=b2614;gene_synonym=ECK2610;gene_synonym=JW2594;function=IS%2C phage%2C Tn%3B Phage-related functions and prophages;note=phage lambda replication%3B host DNA synthesis%3B heat shock protein%3B protein repair%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=heat shock protein;protein_id=AAC75663.1;db_xref=GI:1788967;db_xref=ASAP:ABE-0008598;db_xref=UniProtKB/Swiss-Prot:P09372;db_xref=EcoGene:EG10416 EMBL gene 2750831 2751709 . + . ID=.5695;gene=nadK;locus_tag=b2615;gene_synonym=ECK2611;gene_synonym=JW2596;gene_synonym=yfjB;gene_synonym=yfjE;db_xref=EcoGene:EG12192 EMBL CDS 2750831 2751709 . + 0 ID=.5696;gene=nadK;locus_tag=b2615;gene_synonym=ECK2611;gene_synonym=JW2596;gene_synonym=yfjB;gene_synonym=yfjE;ec_number=2.7.1.23;experiment=N-terminus verified by Edman degradation: PMID 11488932;codon_start=1;transl_table=11;product=NAD kinase;protein_id=AAC75664.1;db_xref=GI:1788968;db_xref=ASAP:ABE-0008603;db_xref=UniProtKB/Swiss-Prot:P0A7B3;db_xref=EcoGene:EG12192 EMBL gene 2751795 2753456 . + . ID=.5697;gene=recN;locus_tag=b2616;gene_synonym=ECK2612;gene_synonym=JW5416;gene_synonym=radB;db_xref=EcoGene:EG10831 EMBL CDS 2751795 2753456 . + 0 ID=.5698;gene=recN;locus_tag=b2616;gene_synonym=ECK2612;gene_synonym=JW5416;gene_synonym=radB;function=putative enzyme%3B DNA - replication%2C repair%2C restriction/modification;note=protein used in recombination and DNA repair%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006310 - DNA recombination%3B GO_process: GO:0006281 - DNA repair%3B GO_process: GO:0009432 - SOS response;codon_start=1;transl_table=11;product=recombination and repair protein;protein_id=AAT48145.1;db_xref=GI:48994901;db_xref=ASAP:ABE-0008611;db_xref=UniProtKB/Swiss-Prot:P05824;db_xref=EcoGene:EG10831 EMBL gene 2753605 2753946 . + . ID=.5699;gene=bamE;locus_tag=b2617;gene_synonym=ECK2613;gene_synonym=JW2598;gene_synonym=smpA;gene_synonym=smqA;db_xref=EcoGene:EG10952 EMBL CDS 2753605 2753946 . + 0 ID=.5700;gene=bamE;locus_tag=b2617;gene_synonym=ECK2613;gene_synonym=JW2598;gene_synonym=smpA;gene_synonym=smqA;note=small membrane protein A%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=lipoprotein component of BamABCDE OM biogenesis complex;protein_id=AAC75666.2;db_xref=GI:87082138;db_xref=ASAP:ABE-0008614;db_xref=UniProtKB/Swiss-Prot:P0A937;db_xref=EcoGene:EG10952 EMBL gene 2754008 2754298 . - . ID=.5701;gene=ratB;locus_tag=b2618;gene_synonym=ECK2614;gene_synonym=JW2599;gene_synonym=pasI;gene_synonym=yfjF;db_xref=EcoGene:EG13192 EMBL CDS 2754008 2754298 . - 0 ID=.5702;gene=ratB;locus_tag=b2618;gene_synonym=ECK2614;gene_synonym=JW2599;gene_synonym=pasI;gene_synonym=yfjF;codon_start=1;transl_table=11;product=UPF0125 family protein;protein_id=AAC75667.2;db_xref=GI:87082139;db_xref=ASAP:ABE-0008616;db_xref=UniProtKB/Swiss-Prot:P52119;db_xref=EcoGene:EG13192 EMBL gene 2754288 2754764 . - . ID=.5703;gene=ratA;locus_tag=b2619;gene_synonym=ECK2615;gene_synonym=JW2600;gene_synonym=pasT;gene_synonym=yfjG;db_xref=EcoGene:EG13193 EMBL CDS 2754288 2754764 . - 0 ID=.5704;gene=ratA;locus_tag=b2619;gene_synonym=ECK2615;gene_synonym=JW2600;gene_synonym=pasT;gene_synonym=yfjG;codon_start=1;transl_table=11;product=toxic UPF0083 family protein inhibitor of 70S ribosome formation;protein_id=AAC75668.1;db_xref=GI:1788972;db_xref=ASAP:ABE-0008618;db_xref=UniProtKB/Swiss-Prot:P0AGL5;db_xref=EcoGene:EG13193 EMBL gene 2754896 2755378 . + . ID=.5705;gene=smpB;locus_tag=b2620;gene_synonym=ECK2616;gene_synonym=JW2601;gene_synonym=smqB;db_xref=EcoGene:EG11782 EMBL CDS 2754896 2755378 . + 0 ID=.5706;gene=smpB;locus_tag=b2620;gene_synonym=ECK2616;gene_synonym=JW2601;gene_synonym=smqB;note=small protein B;codon_start=1;transl_table=11;product=tmRNA-binding trans-translation protein;protein_id=AAC75669.1;db_xref=GI:1788973;db_xref=ASAP:ABE-0008622;db_xref=UniProtKB/Swiss-Prot:P0A832;db_xref=EcoGene:EG11782 EMBL gene 2755593 2755955 . + . ID=.5707;gene=ssrA;locus_tag=b2621;gene_synonym=ECK2617;gene_synonym=JWR0055;gene_synonym=sipB;db_xref=EcoGene:EG30100 EMBL tmRNA 2755593 2755955 . + . ID=.5708;gene=ssrA;locus_tag=b2621;gene_synonym=ECK2617;gene_synonym=JWR0055;gene_synonym=sipB;product=tmRNA%2C 10Sa RNA;note=acts as tRNA-Ala and mRNA template for tagging proteins resulting from premature transcription termination for degradation%2C a process known as trans-translation;function=2.2.6 information transfer%3B RNA related%3B rRNA%2C stable RNA;function=2.3.6 information transfer%3B protein related%3B turnover%2C degradation;function=6.6 cell structure%3B ribosome;function=7.1 location of gene products%3B cytoplasm;function=RNA%3B Ribosomal and stable RNAs;db_xref=ASAP:ABE-0008624;db_xref=EcoGene:EG30100 EMBL sequence_feature 2755957 2777986 . + . ID=.5709;note=cryptic prophage CP4-57 EMBL gene 2756159 2757400 . + . ID=.5710;gene=intA;locus_tag=b2622;gene_synonym=ECK2618;gene_synonym=intX;gene_synonym=JW2602;gene_synonym=slpA;db_xref=EcoGene:EG11783 EMBL CDS 2756159 2757400 . + 0 ID=.5711;gene=intA;locus_tag=b2622;gene_synonym=ECK2618;gene_synonym=intX;gene_synonym=JW2602;gene_synonym=slpA;function=Phage or Prophage Related;note=prophage CP4-57 integrase;codon_start=1;transl_table=11;product=CP4-57 prophage%3B integrase;protein_id=AAC75670.1;db_xref=GI:1788974;db_xref=ASAP:ABE-0008630;db_xref=UniProtKB/Swiss-Prot:P32053;db_xref=EcoGene:EG11783 EMBL gene 2757644 2758600 . - . ID=.5712;gene=yfjH;locus_tag=b2623;gene_synonym=ECK2619;gene_synonym=JW2603;db_xref=EcoGene:EG13194 EMBL CDS 2757644 2758600 . - 0 ID=.5713;gene=yfjH;locus_tag=b2623;gene_synonym=ECK2619;gene_synonym=JW2603;function=Phage or Prophage Related;note=putative histone;codon_start=1;transl_table=11;product=CP4-57 prophage%3B uncharacterized protein;protein_id=AAC75671.1;db_xref=GI:1788976;db_xref=ASAP:ABE-0008632;db_xref=UniProtKB/Swiss-Prot:P52123;db_xref=EcoGene:EG13194 EMBL gene 2758644 2758856 . + . ID=.5714;gene=alpA;locus_tag=b2624;gene_synonym=ECK2620;gene_synonym=JW2604;db_xref=EcoGene:EG12112 EMBL CDS 2758644 2758856 . + 0 ID=.5715;gene=alpA;locus_tag=b2624;gene_synonym=ECK2620;gene_synonym=JW2604;function=IS%2C phage%2C Tn%3B Phage or Prophage Related;note=prophage CP4-57 regulatory protein alpA%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=CP4-57 prophage%3B DNA-binding transcriptional activator;protein_id=AAC75672.1;db_xref=GI:1788977;db_xref=ASAP:ABE-0008636;db_xref=UniProtKB/Swiss-Prot:P33997;db_xref=EcoGene:EG12112 EMBL gene 2758985 2760394 . + . ID=.5716;gene=yfjI;locus_tag=b2625;gene_synonym=ECK2621;gene_synonym=JW2605;db_xref=EcoGene:EG13195 EMBL CDS 2758985 2760394 . + 0 ID=.5717;gene=yfjI;locus_tag=b2625;gene_synonym=ECK2621;gene_synonym=JW2605;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=CP4-57 prophage%3B uncharacterized protein;protein_id=AAC75673.1;db_xref=GI:1788978;db_xref=ASAP:ABE-0008643;db_xref=UniProtKB/Swiss-Prot:P52124;db_xref=EcoGene:EG13195 EMBL gene 2760547 2761173 . + . ID=.5718;gene=yfjJ;locus_tag=b2626;gene_synonym=ECK2622;gene_synonym=JW2607;db_xref=EcoGene:EG13196 EMBL CDS 2760547 2761173 . + 0 ID=.5719;gene=yfjJ;locus_tag=b2626;gene_synonym=ECK2622;gene_synonym=JW2607;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=CP4-57 prophage%3B uncharacterized protein;protein_id=AAC75674.1;db_xref=GI:1788979;db_xref=ASAP:ABE-0008646;db_xref=UniProtKB/Swiss-Prot:P52125;db_xref=EcoGene:EG13196 EMBL gene 2761351 2763540 . - . ID=.5720;gene=yfjK;locus_tag=b2627;gene_synonym=ECK2623;gene_synonym=JW2608;db_xref=EcoGene:EG13197 EMBL CDS 2761351 2763540 . - 0 ID=.5721;gene=yfjK;locus_tag=b2627;gene_synonym=ECK2623;gene_synonym=JW2608;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=radiation resistance protein%3B DEAD/H helicase-like protein%3B CP4-57 putative defective prophage;protein_id=AAC75675.1;db_xref=GI:1788980;db_xref=ASAP:ABE-0008648;db_xref=UniProtKB/Swiss-Prot:P52126;db_xref=EcoGene:EG13197 EMBL gene 2763537 2765153 . - . ID=.5722;gene=yfjL;locus_tag=b2628;gene_synonym=ECK2624;gene_synonym=JW2609;db_xref=EcoGene:EG13198 EMBL CDS 2763537 2765153 . - 0 ID=.5723;gene=yfjL;locus_tag=b2628;gene_synonym=ECK2624;gene_synonym=JW2609;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=CP4-57 putative defective prophage%2C DUF4297/DUF1837 polymorphic toxin family protein;protein_id=AAC75676.1;db_xref=GI:1788981;db_xref=ASAP:ABE-0008650;db_xref=UniProtKB/Swiss-Prot:P52127;db_xref=EcoGene:EG13198 EMBL gene 2765513 2765776 . - . ID=.5724;gene=yfjM;locus_tag=b2629;gene_synonym=ECK2625;gene_synonym=JW2610;db_xref=EcoGene:EG13199 EMBL CDS 2765513 2765776 . - 0 ID=.5725;gene=yfjM;locus_tag=b2629;gene_synonym=ECK2625;gene_synonym=JW2610;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=CP4-57 prophage%3B uncharacterized protein;protein_id=AAC75677.1;db_xref=GI:1788982;db_xref=ASAP:ABE-0008654;db_xref=UniProtKB/Swiss-Prot:P52128;db_xref=EcoGene:EG13199 EMBL gene 2765918 2766991 . + . ID=.5726;gene=rnlA;locus_tag=b2630;gene_synonym=ECK2626;gene_synonym=JW2611;gene_synonym=std;gene_synonym=yfjN;db_xref=EcoGene:EG13200 EMBL CDS 2765918 2766991 . + 0 ID=.5727;gene=rnlA;locus_tag=b2630;gene_synonym=ECK2626;gene_synonym=JW2611;gene_synonym=std;gene_synonym=yfjN;function=Phage or Prophage Related;note=putative cell division protein;codon_start=1;transl_table=11;product=CP4-57 prophage%3B RNase LS;protein_id=AAC75678.1;db_xref=GI:1788983;db_xref=ASAP:ABE-0008659;db_xref=UniProtKB/Swiss-Prot:P52129;db_xref=EcoGene:EG13200 EMBL gene 2766984 2767355 . + . ID=.5728;gene=rnlB;locus_tag=b2631;gene_synonym=ECK2627;gene_synonym=JW5418;gene_synonym=yfjO;db_xref=EcoGene:EG13201 EMBL CDS 2766984 2767355 . + 0 ID=.5729;gene=rnlB;locus_tag=b2631;gene_synonym=ECK2627;gene_synonym=JW5418;gene_synonym=yfjO;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=CP4-57 prophage%3B uncharacterized protein;protein_id=AAC75679.2;db_xref=GI:87082140;db_xref=ASAP:ABE-0008665;db_xref=UniProtKB/Swiss-Prot:P52130;db_xref=EcoGene:EG13201 EMBL gene 2767710 2768573 . + . ID=.5730;gene=yfjP;locus_tag=b2632;gene_synonym=ECK2628;gene_synonym=JW5419;db_xref=EcoGene:EG13202 EMBL CDS 2767710 2768573 . + 0 ID=.5731;gene=yfjP;locus_tag=b2632;gene_synonym=ECK2628;gene_synonym=JW5419;function=Phage or Prophage Related;note=putative GTP-binding protein;codon_start=1;transl_table=11;product=CP4-57 prophage%3B 50S ribosome-binding GTPase family protein;protein_id=AAT48146.1;db_xref=GI:48994902;db_xref=ASAP:ABE-0008669;db_xref=UniProtKB/Swiss-Prot:P52131;db_xref=EcoGene:EG13202 EMBL gene 2768665 2769486 . + . ID=.5732;gene=yfjQ;locus_tag=b2633;gene_synonym=ECK2629;gene_synonym=JW2614;db_xref=EcoGene:EG13203 EMBL CDS 2768665 2769486 . + 0 ID=.5733;gene=yfjQ;locus_tag=b2633;gene_synonym=ECK2629;gene_synonym=JW2614;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=CP4-57 prophage%3B uncharacterized protein;protein_id=AAC75681.1;db_xref=GI:1788987;db_xref=ASAP:ABE-0008673;db_xref=UniProtKB/Swiss-Prot:P52132;db_xref=EcoGene:EG13203 EMBL gene 2769703 2770404 . + . ID=.5734;gene=yfjR;locus_tag=b2634;gene_synonym=ECK2630;gene_synonym=JW2615;db_xref=EcoGene:EG13204 EMBL CDS 2769703 2770404 . + 0 ID=.5735;gene=yfjR;locus_tag=b2634;gene_synonym=ECK2630;gene_synonym=JW2615;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=CP4-57 prophage%3B putative DNA-binding transcriptional regulator;protein_id=AAC75682.1;db_xref=GI:1788988;db_xref=ASAP:ABE-0008676;db_xref=UniProtKB/Swiss-Prot:P52133;db_xref=EcoGene:EG13204 EMBL gene 2770445 2770681 . + . ID=.5736;gene=ypjK;locus_tag=b2635;gene_synonym=ECK2631;gene_synonym=JW5888;db_xref=EcoGene:EG14379 EMBL CDS 2770445 2770681 . + 0 ID=.5737;gene=ypjK;locus_tag=b2635;gene_synonym=ECK2631;gene_synonym=JW5888;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=CP4-57 prophage%3B putative inner membrane protein;protein_id=AAC75683.2;db_xref=GI:87082141;db_xref=ASAP:ABE-0008678;db_xref=UniProtKB/Swiss-Prot:P52134;db_xref=EcoGene:EG14379 EMBL gene 2770681 2771124 . + . ID=.5738;gene=yfjS;locus_tag=b2636;gene_synonym=ECK2632;gene_synonym=JW5921;db_xref=EcoGene:EG13205 EMBL CDS 2770681 2771124 . + 0 ID=.5739;gene=yfjS;locus_tag=b2636;gene_synonym=ECK2632;gene_synonym=JW5921;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=CP4-57 prophage%3B uncharacterized protein;protein_id=AAC75684.2;db_xref=GI:87082142;db_xref=ASAP:ABE-0008680;db_xref=UniProtKB/Swiss-Prot:O52982;db_xref=EcoGene:EG13205 EMBL gene 2771148 2771615 . + . ID=.5740;gene=yfjT;locus_tag=b2637;gene_synonym=ECK2633;gene_synonym=JW2618;db_xref=EcoGene:EG13206 EMBL CDS 2771148 2771615 . + 0 ID=.5741;gene=yfjT;locus_tag=b2637;gene_synonym=ECK2633;gene_synonym=JW2618;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=CP4-57 prophage%3B putative periplasmic protein;protein_id=AAC75685.1;db_xref=GI:1788990;db_xref=ASAP:ABE-0008683;db_xref=UniProtKB/Swiss-Prot:P52135;db_xref=EcoGene:EG13206 EMBL gene 2772002 2772154 . - . ID=.5742;gene=yfjU;locus_tag=b2638;gene_synonym=ECK2634;gene_synonym=JW2619;pseudo=true;db_xref=EcoGene:EG13207 EMBL CDS 2772002 2772154 . - 0 ID=.5743;gene=yfjU;locus_tag=b2638;gene_synonym=ECK2634;gene_synonym=JW2619;note=CP4-57 prophage%3B conserved protein%3BPhage or Prophage Related;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0008685;db_xref=UniProtKB/Swiss-Prot:P0CF86;db_xref=EcoGene:EG13207 EMBL gene 2772167 2773182 . - . ID=.5744;gene=yfjV;locus_tag=b2641;gene_synonym=ECK2635;gene_synonym=JW5922;gene_synonym=ypjL;gene_synonym=ypjM;pseudo=true;db_xref=EcoGene:EG13208 EMBL biological_region 2772167 2773182 . - 0 ID=.5745;featflags=type:CDS;gene=yfjV;locus_tag=b2641;gene_synonym=ECK2635;gene_synonym=JW5922;gene_synonym=ypjL;gene_synonym=ypjM;note=pseudogene%2C CP4-57 prophage%3BPhage or Prophage Related%3B putative pump protein;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0008687;db_xref=ASAP:ABE-0008690;db_xref=ASAP:ABE-0008692;db_xref=UniProtKB/Swiss-Prot:P52137;db_xref=EcoGene:EG13208 EMBL CDS 2772167 2773066 . - 0 Parent=.5745 EMBL CDS 2773066 2773182 . - 0 Parent=.5745 EMBL gene 2773318 2775021 . + . ID=.5748;gene=yfjW;locus_tag=b2642;gene_synonym=ECK2638;gene_synonym=JW2623;db_xref=EcoGene:EG13209 EMBL CDS 2773318 2775021 . + 0 ID=.5749;gene=yfjW;locus_tag=b2642;gene_synonym=ECK2638;gene_synonym=JW2623;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=CP4-57 prophage%3B putative inner membrane protein;protein_id=AAC75690.1;db_xref=GI:2367146;db_xref=ASAP:ABE-0008699;db_xref=UniProtKB/Swiss-Prot:P52138;db_xref=EcoGene:EG13209 EMBL gene 2775545 2775816 . + . ID=.5750;gene=ypjI;locus_tag=b4644;gene_synonym=ECK4438;pseudo=true;db_xref=EcoGene:EG13309 EMBL biological_region 2775545 2775816 . + 0 ID=.5751;featflags=type:CDS;gene=ypjI;locus_tag=b4644;gene_synonym=ECK4438;note=pseudogene%2C CP4-57 putative prophage remnant%3BPhage or Prophage Related;pseudo=true;codon_start=1;transl_table=11;db_xref=UniProtKB/Swiss-Prot:P58095;db_xref=EcoGene:EG13309 EMBL CDS 2775545 2775724 . + 0 Parent=.5751 EMBL CDS 2775724 2775816 . + 0 Parent=.5751 EMBL gene 2775919 2776377 . + . ID=.5754;gene=yfjX;locus_tag=b2643;gene_synonym=ECK2639;gene_synonym=JW2624;db_xref=EcoGene:EG13210 EMBL CDS 2775919 2776377 . + 0 ID=.5755;gene=yfjX;locus_tag=b2643;gene_synonym=ECK2639;gene_synonym=JW2624;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=CP4-57 prophage%3B putative antirestriction protein;protein_id=AAC75691.1;db_xref=GI:1788996;db_xref=ASAP:ABE-0008704;db_xref=UniProtKB/Swiss-Prot:P52139;db_xref=EcoGene:EG13210 EMBL gene 2776386 2776868 . + . ID=.5756;gene=yfjY;locus_tag=b2644;gene_synonym=ECK2640;gene_synonym=JW2625;db_xref=EcoGene:EG13211 EMBL CDS 2776386 2776868 . + 0 ID=.5757;gene=yfjY;locus_tag=b2644;gene_synonym=ECK2640;gene_synonym=JW2625;function=Phage or Prophage Related;note=putative DNA repair protein;codon_start=1;transl_table=11;product=CP4-57 prophage%3B putative DNA repair protein;protein_id=AAC75692.1;db_xref=GI:1788997;db_xref=ASAP:ABE-0008706;db_xref=UniProtKB/Swiss-Prot:P52140;db_xref=EcoGene:EG13211 EMBL gene 2776877 2777077 . + . ID=.5758;gene=ypjJ;locus_tag=b4548;gene_synonym=ECK2641;gene_synonym=JW5421;db_xref=EcoGene:EG14330 EMBL CDS 2776877 2777077 . + 0 ID=.5759;gene=ypjJ;locus_tag=b4548;gene_synonym=ECK2641;gene_synonym=JW5421;note=GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=ABD18698.1;db_xref=GI:87082144;db_xref=ASAP:ABE-0285069;db_xref=UniProtKB/Swiss-Prot:P58033;db_xref=EcoGene:EG14330 EMBL gene 2777115 2777432 . + . ID=.5760;gene=yfjZ;locus_tag=b2645;gene_synonym=ECK2642;gene_synonym=JW2626;db_xref=EcoGene:EG13212 EMBL CDS 2777115 2777432 . + 0 ID=.5761;gene=yfjZ;locus_tag=b2645;gene_synonym=ECK2642;gene_synonym=JW2626;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=CP4-57 prophage%3B antitoxin of the YpjF-YfjZ toxin-antitoxin system;protein_id=AAC75693.1;db_xref=GI:1788998;db_xref=ASAP:ABE-0008709;db_xref=UniProtKB/Swiss-Prot:P52141;db_xref=EcoGene:EG13212 EMBL gene 2777453 2777782 . + . ID=.5762;gene=ypjF;locus_tag=b2646;gene_synonym=ECK2643;gene_synonym=JW2627;db_xref=EcoGene:EG14284 EMBL CDS 2777453 2777782 . + 0 ID=.5763;gene=ypjF;locus_tag=b2646;gene_synonym=ECK2643;gene_synonym=JW2627;function=Phage or Prophage Related;codon_start=1;transl_table=11;product=CP4-57 prophage%3B toxin of the YpjF-YfjZ toxin-antitoxin system;protein_id=AAC75694.1;db_xref=GI:1788999;db_xref=ASAP:ABE-0008711;db_xref=UniProtKB/Swiss-Prot:Q46953;db_xref=EcoGene:EG14284 EMBL gene 2777972 2777985 . + . ID=.5764;gene=psaA;locus_tag=b4645;gene_synonym=ECK4465;pseudo=true;db_xref=EcoGene:EG31174 EMBL tmRNA 2777972 2777985 . + . ID=.5765;gene=psaA;locus_tag=b4645;gene_synonym=ECK4465;note=CP4-57 attachment site duplication%2C ssrA pseudogene;pseudo=true;db_xref=EcoGene:EG31174 EMBL gene 2778146 2782726 . - . ID=.5766;gene=ypjA;locus_tag=b2647;gene_synonym=ECK2644;gene_synonym=JW5422;db_xref=EcoGene:EG13213 EMBL CDS 2778146 2782726 . - 0 ID=.5767;gene=ypjA;locus_tag=b2647;gene_synonym=ECK2644;gene_synonym=JW5422;function=putative transport%3B Not classified;note=putative ATP-binding component of a transport system%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane;codon_start=1;transl_table=11;product=adhesin-like autotransporter;protein_id=AAC75695.2;db_xref=GI:87082145;db_xref=ASAP:ABE-0008713;db_xref=UniProtKB/Swiss-Prot:P52143;db_xref=EcoGene:EG13213 EMBL gene 2783065 2783304 . - . ID=.5768;gene=pinH;locus_tag=b2648;gene_synonym=ECK2645;gene_synonym=JW5423;gene_synonym=ypjG;pseudo=true;db_xref=EcoGene:EG14310 EMBL CDS 2783065 2783304 . - 0 ID=.5769;gene=pinH;locus_tag=b2648;gene_synonym=ECK2645;gene_synonym=JW5423;gene_synonym=ypjG;note=pseudogene%2C invertase resolvase family;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0008721;db_xref=UniProtKB/Swiss-Prot:P76611;db_xref=EcoGene:EG14310 EMBL gene 2783638 2785011 . - . ID=.5770;gene=ypjC;locus_tag=b2650;gene_synonym=ECK2646;gene_synonym=JW2629;gene_synonym=ypjB;pseudo=true;db_xref=EcoGene:EG13519 EMBL CDS 2783638 2785011 . - 0 ID=.5771;gene=ypjC;locus_tag=b2650;gene_synonym=ECK2646;gene_synonym=JW2629;gene_synonym=ypjB;note=pseudogene;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0008724;db_xref=ASAP:ABE-0008727;db_xref=UniProtKB/Swiss-Prot:P76613;db_xref=EcoGene:EG13519 EMBL gene 2785762 2785837 . - . ID=.5772;gene=ileY;locus_tag=b2652;gene_synonym=ECK2648;gene_synonym=JWR0056;db_xref=EcoGene:EG31121 EMBL tRNA 2785762 2785837 . - . ID=.5773;gene=ileY;locus_tag=b2652;gene_synonym=ECK2648;gene_synonym=JWR0056;product=tRNA-Ile;note=anticodon: GAU;db_xref=ASAP:ABE-0008733;db_xref=EcoGene:EG31121 EMBL gene 2786397 2788649 . + . ID=.5774;gene=ygaQ;locus_tag=b4462;gene_synonym=ECK2649;gene_synonym=JW5425;gene_synonym=ygaR;gene_synonym=yqaC;gene_synonym=yqaD;pseudo=true;db_xref=EcoGene:EG13520 EMBL CDS 2786397 2788649 . + 0 ID=.5775;gene=ygaQ;locus_tag=b4462;gene_synonym=ECK2649;gene_synonym=JW5425;gene_synonym=ygaR;gene_synonym=yqaC;gene_synonym=yqaD;note=uncharacterized protein%3B putative enzyme;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0008739;db_xref=ASAP:ABE-0008747;db_xref=ASAP:ABE-0008751;db_xref=ASAP:ABE-0174112;db_xref=UniProtKB/Swiss-Prot:P76616;db_xref=EcoGene:EG13520 EMBL gene 2788985 2789962 . + . ID=.5776;gene=csiD;locus_tag=b2659;gene_synonym=csi-12;gene_synonym=ECK2653;gene_synonym=JW5427;gene_synonym=ygaT;db_xref=EcoGene:EG13523 EMBL CDS 2788985 2789962 . + 0 ID=.5777;gene=csiD;locus_tag=b2659;gene_synonym=csi-12;gene_synonym=ECK2653;gene_synonym=JW5427;gene_synonym=ygaT;experiment=N-terminus verified by Edman degradation: PMID 9512707;codon_start=1;transl_table=11;product=carbon starvation protein;protein_id=AAC75706.2;db_xref=GI:87082147;db_xref=ASAP:ABE-0008754;db_xref=UniProtKB/Swiss-Prot:P76621;db_xref=EcoGene:EG13523 EMBL gene 2789982 2791250 . + . ID=.5778;gene=lhgO;locus_tag=b2660;gene_synonym=ECK2654;gene_synonym=JW2635;gene_synonym=ygaF;db_xref=EcoGene:EG12387 EMBL CDS 2789982 2791250 . + 0 ID=.5779;gene=lhgO;locus_tag=b2660;gene_synonym=ECK2654;gene_synonym=JW2635;gene_synonym=ygaF;codon_start=1;transl_table=11;product=L-2-hydroxyglutarate oxidase;protein_id=AAC75707.2;db_xref=GI:87082148;db_xref=ASAP:ABE-0008756;db_xref=UniProtKB/Swiss-Prot:P37339;db_xref=EcoGene:EG12387 EMBL gene 2791273 2792721 . + . ID=.5780;gene=gabD;locus_tag=b2661;gene_synonym=ECK2655;gene_synonym=JW2636;db_xref=EcoGene:EG11329 EMBL CDS 2791273 2792721 . + 0 ID=.5781;gene=gabD;locus_tag=b2661;gene_synonym=ECK2655;gene_synonym=JW2636;ec_number=1.2.1.16;function=enzyme%3B Central intermediary metabolism: Pool%2C multipurpose conversions;note=succinate-semialdehyde dehydrogenase%2C NADP-dependent activity%3B GO_process: GO:0009450 - gamma-aminobutyric acid catabolic process%3B GO_process: GO:0009447 - putrescine catabolic process;codon_start=1;transl_table=11;product=succinate-semialdehyde dehydrogenase I%2C NADP-dependent;protein_id=AAC75708.1;db_xref=GI:1789015;db_xref=ASAP:ABE-0008758;db_xref=UniProtKB/Swiss-Prot:P25526;db_xref=EcoGene:EG11329 EMBL gene 2792735 2794015 . + . ID=.5782;gene=gabT;locus_tag=b2662;gene_synonym=ECK2656;gene_synonym=JW2637;db_xref=EcoGene:EG10361 EMBL CDS 2792735 2794015 . + 0 ID=.5783;gene=gabT;locus_tag=b2662;gene_synonym=ECK2656;gene_synonym=JW2637;ec_number=2.6.1.19;function=enzyme%3B Central intermediary metabolism: Pool%2C multipurpose conversions;experiment=N-terminus verified by Edman degradation: PMID 2178550;note=4-aminobutyrate aminotransferase activity%3B GO_process: GO:0009450 - gamma-aminobutyric acid catabolic process%3B GO_process: GO:0009447 - putrescine catabolic process;codon_start=1;transl_table=11;product=4-aminobutyrate aminotransferase%2C PLP-dependent;protein_id=AAC75709.1;db_xref=GI:1789016;db_xref=ASAP:ABE-0008760;db_xref=UniProtKB/Swiss-Prot:P22256;db_xref=EcoGene:EG10361 EMBL repeat_region 2794028 2794163 . + . ID=.5784;note=REP191 (repetitive extragenic palindromic) element%3B contains 3 REP sequences EMBL gene 2794253 2795653 . + . ID=.5785;gene=gabP;locus_tag=b2663;gene_synonym=ECK2657;gene_synonym=JW2638;db_xref=EcoGene:EG11330 EMBL CDS 2794253 2795653 . + 0 ID=.5786;gene=gabP;locus_tag=b2663;gene_synonym=ECK2657;gene_synonym=JW2638;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=transport permease protein of gamma-aminobutyrate%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=gamma-aminobutyrate transporter;protein_id=AAC75710.1;db_xref=GI:1789017;db_xref=ASAP:ABE-0008763;db_xref=UniProtKB/Swiss-Prot:P25527;db_xref=EcoGene:EG11330 EMBL gene 2795674 2796336 . + . ID=.5787;gene=csiR;locus_tag=b2664;gene_synonym=ECK2658;gene_synonym=gabC;gene_synonym=JW2639;gene_synonym=ygaE;db_xref=EcoGene:EG12386 EMBL CDS 2795674 2796336 . + 0 ID=.5788;gene=csiR;locus_tag=b2664;gene_synonym=ECK2658;gene_synonym=gabC;gene_synonym=JW2639;gene_synonym=ygaE;function=regulator%3B Not classified;note=putative transcriptional regulator%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=transcriptional repressor of csiD;protein_id=AAC75711.2;db_xref=GI:87082149;db_xref=ASAP:ABE-0008765;db_xref=UniProtKB/Swiss-Prot:P37338;db_xref=EcoGene:EG12386 EMBL gene 2796337 2796786 . - . ID=.5789;gene=ygaU;locus_tag=b2665;gene_synonym=ECK2659;gene_synonym=JW2640;gene_synonym=yzzM;db_xref=EcoGene:EG12675 EMBL CDS 2796337 2796786 . - 0 ID=.5790;gene=ygaU;locus_tag=b2665;gene_synonym=ECK2659;gene_synonym=JW2640;gene_synonym=yzzM;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC75712.1;db_xref=GI:1789019;db_xref=ASAP:ABE-0008767;db_xref=UniProtKB/Swiss-Prot:P0ADE6;db_xref=EcoGene:EG12675 EMBL gene 2796870 2797028 . - . ID=.5791;gene=yqaE;locus_tag=b2666;gene_synonym=ECK2660;gene_synonym=JW2641;db_xref=EcoGene:EG14313 EMBL CDS 2796870 2797028 . - 0 ID=.5792;gene=yqaE;locus_tag=b2666;gene_synonym=ECK2660;gene_synonym=JW2641;codon_start=1;transl_table=11;product=cyaR sRNA-regulated protein;protein_id=AAC75713.1;db_xref=GI:1789020;db_xref=ASAP:ABE-0008770;db_xref=UniProtKB/Swiss-Prot:P0AE42;db_xref=EcoGene:EG14313 EMBL gene 2797211 2797510 . + . ID=.5793;gene=ygaV;locus_tag=b2667;gene_synonym=ECK2661;gene_synonym=JW2642;db_xref=EcoGene:EG13524 EMBL CDS 2797211 2797510 . + 0 ID=.5794;gene=ygaV;locus_tag=b2667;gene_synonym=ECK2661;gene_synonym=JW2642;codon_start=1;transl_table=11;product=tributyltin-inducible repressor of ygaVP;protein_id=AAC75714.1;db_xref=GI:1789021;db_xref=ASAP:ABE-0008784;db_xref=UniProtKB/Swiss-Prot:P77295;db_xref=EcoGene:EG13524 EMBL gene 2797520 2798044 . + . ID=.5795;gene=ygaP;locus_tag=b2668;gene_synonym=ECK2662;gene_synonym=JW2643;db_xref=EcoGene:EG13288 EMBL CDS 2797520 2798044 . + 0 ID=.5796;gene=ygaP;locus_tag=b2668;gene_synonym=ECK2662;gene_synonym=JW2643;codon_start=1;transl_table=11;product=DUF2892 family inner membrane rhodanese;protein_id=AAC75715.1;db_xref=GI:1789022;db_xref=ASAP:ABE-0008786;db_xref=UniProtKB/Swiss-Prot:P55734;db_xref=EcoGene:EG13288 EMBL repeat_region 2798053 2798082 . + . ID=.5797;note=REP192 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 2798091 2798495 . - . ID=.5798;gene=stpA;locus_tag=b2669;gene_synonym=ECK2663;gene_synonym=hnsB;gene_synonym=hsm-3;gene_synonym=JW2644;gene_synonym=rsv;db_xref=EcoGene:EG11554 EMBL CDS 2798091 2798495 . - 0 ID=.5799;gene=stpA;locus_tag=b2669;gene_synonym=ECK2663;gene_synonym=hnsB;gene_synonym=hsm-3;gene_synonym=JW2644;gene_synonym=rsv;function=regulator%3B Basic proteins - synthesis%2C modification;note=DNA-binding protein%3B H-NS-like protein%3B chaperone activity%3B RNA splicing?%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=DNA binding protein%2C nucleoid-associated;protein_id=AAC75716.1;db_xref=GI:1789023;db_xref=ASAP:ABE-0008788;db_xref=UniProtKB/Swiss-Prot:P0ACG1;db_xref=EcoGene:EG11554 EMBL gene 2799164 2799613 . + . ID=.5800;gene=alaE;locus_tag=b2670;gene_synonym=ECK2664;gene_synonym=JW2645;gene_synonym=ygaW;db_xref=EcoGene:EG13525 EMBL CDS 2799164 2799613 . + 0 ID=.5801;gene=alaE;locus_tag=b2670;gene_synonym=ECK2664;gene_synonym=JW2645;gene_synonym=ygaW;codon_start=1;transl_table=11;product=alanine exporter%2C alanine-inducible%2C stress-responsive;protein_id=AAC75717.1;db_xref=GI:1789025;db_xref=ASAP:ABE-0008793;db_xref=UniProtKB/Swiss-Prot:P64550;db_xref=EcoGene:EG13525 EMBL gene 2799650 2799994 . - . ID=.5802;gene=ygaC;locus_tag=b2671;gene_synonym=ECK2665;gene_synonym=JW2646;db_xref=EcoGene:EG12201 EMBL CDS 2799650 2799994 . - 0 ID=.5803;gene=ygaC;locus_tag=b2671;gene_synonym=ECK2665;gene_synonym=JW2646;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC75718.1;db_xref=GI:1789026;db_xref=ASAP:ABE-0008795;db_xref=UniProtKB/Swiss-Prot:P0AD53;db_xref=EcoGene:EG12201 EMBL gene 2800146 2800475 . + . ID=.5804;gene=ygaM;locus_tag=b2672;gene_synonym=ECK2666;gene_synonym=JW2647;db_xref=EcoGene:EG13285 EMBL CDS 2800146 2800475 . + 0 ID=.5805;gene=ygaM;locus_tag=b2672;gene_synonym=ECK2666;gene_synonym=JW2647;codon_start=1;transl_table=11;product=putative membrane-anchored DUF883 family ribosome-binding protein;protein_id=AAC75719.2;db_xref=GI:452909628;db_xref=ASAP:ABE-0008799;db_xref=UniProtKB/Swiss-Prot:P0ADQ7;db_xref=EcoGene:EG13285 EMBL gene 2800723 2800968 . + . ID=.5806;gene=nrdH;locus_tag=b2673;gene_synonym=ECK2667;gene_synonym=JW2648;gene_synonym=ygaN;db_xref=EcoGene:EG13286 EMBL CDS 2800723 2800968 . + 0 ID=.5807;gene=nrdH;locus_tag=b2673;gene_synonym=ECK2667;gene_synonym=JW2648;gene_synonym=ygaN;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Thioredoxin%2C glutaredoxin%2C glutathione;note=glutaredoxin-like protein%3B hydrogen donor;codon_start=1;transl_table=11;product=hydrogen donor for NrdEF electron transport system%3B glutaredoxin-like protein;protein_id=AAC75720.1;db_xref=GI:1789028;db_xref=ASAP:ABE-0008802;db_xref=UniProtKB/Swiss-Prot:P0AC65;db_xref=EcoGene:EG13286 EMBL gene 2800965 2801375 . + . ID=.5808;gene=nrdI;locus_tag=b2674;gene_synonym=ECK2668;gene_synonym=JW2649;gene_synonym=ygaO;db_xref=EcoGene:EG13287 EMBL CDS 2800965 2801375 . + 0 ID=.5809;gene=nrdI;locus_tag=b2674;gene_synonym=ECK2668;gene_synonym=JW2649;gene_synonym=ygaO;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Thioredoxin%2C glutaredoxin%2C glutathione;codon_start=1;transl_table=11;product=NrdEF cluster assembly flavodoxin;protein_id=AAC75721.1;db_xref=GI:1789029;db_xref=ASAP:ABE-0008804;db_xref=UniProtKB/Swiss-Prot:P0A772;db_xref=EcoGene:EG13287 EMBL gene 2801348 2803492 . + . ID=.5810;gene=nrdE;locus_tag=b2675;gene_synonym=ECK2669;gene_synonym=JW2650;db_xref=EcoGene:EG20257 EMBL CDS 2801348 2803492 . + 0 ID=.5811;gene=nrdE;locus_tag=b2675;gene_synonym=ECK2669;gene_synonym=JW2650;ec_number=1.17.4.1;function=enzyme%3B Central intermediary metabolism: Nucleotide interconversions;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion;codon_start=1;transl_table=11;product=ribonucleoside-diphosphate reductase 2%2C alpha subunit;protein_id=AAC75722.1;db_xref=GI:1789030;db_xref=ASAP:ABE-0008806;db_xref=UniProtKB/Swiss-Prot:P39452;db_xref=EcoGene:EG20257 EMBL gene 2803502 2804461 . + . ID=.5812;gene=nrdF;locus_tag=b2676;gene_synonym=ECK2670;gene_synonym=JW2651;gene_synonym=ygaD;db_xref=EcoGene:EG12381 EMBL CDS 2803502 2804461 . + 0 ID=.5813;gene=nrdF;locus_tag=b2676;gene_synonym=ECK2670;gene_synonym=JW2651;gene_synonym=ygaD;ec_number=1.17.4.1;function=enzyme%3B Central intermediary metabolism: Nucleotide interconversions;note=ribonucleoside-diphosphate reductase 2%2C beta chain%2C frag%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion;codon_start=1;transl_table=11;product=ribonucleoside-diphosphate reductase 2%2C beta subunit%2C ferritin-like protein;protein_id=AAC75723.1;db_xref=GI:1789031;db_xref=ASAP:ABE-0008808;db_xref=UniProtKB/Swiss-Prot:P37146;db_xref=EcoGene:EG12381 EMBL gene 2804815 2806017 . + . ID=.5814;gene=proV;locus_tag=b2677;gene_synonym=ECK2671;gene_synonym=JW2652;gene_synonym=osrA;gene_synonym=proU;db_xref=EcoGene:EG10771 EMBL CDS 2804815 2806017 . + 0 ID=.5815;gene=proV;locus_tag=b2677;gene_synonym=ECK2671;gene_synonym=JW2652;gene_synonym=osrA;gene_synonym=proU;function=transport%3B Transport of small molecules: Amino acids%2C amines;note=ATP-binding component of transport system for glycine%2C betaine and proline%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0015596 - glycine betaine/proline porter activity%3B GO_process: GO:0006561 - proline biosynthetic process;codon_start=1;transl_table=11;product=glycine betaine/proline ABC transporter periplasmic binding protein;protein_id=AAC75724.1;db_xref=GI:1789032;db_xref=ASAP:ABE-0008814;db_xref=UniProtKB/Swiss-Prot:P14175;db_xref=EcoGene:EG10771 EMBL gene 2806010 2807074 . + . ID=.5816;gene=proW;locus_tag=b2678;gene_synonym=ECK2672;gene_synonym=JW2653;gene_synonym=osrA;gene_synonym=proU;db_xref=EcoGene:EG10772 EMBL CDS 2806010 2807074 . + 0 ID=.5817;gene=proW;locus_tag=b2678;gene_synonym=ECK2672;gene_synonym=JW2653;gene_synonym=osrA;gene_synonym=proU;function=transport%3B Transport of small molecules: Amino acids%2C amines;note=high-affinity transport system for glycine betaine and proline%3B membrane component of ABC superfamily%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_function: GO:0015596 - glycine betaine/proline porter activity%3B GO_process: GO:0006561 - proline biosynthetic process;codon_start=1;transl_table=11;product=glycine betaine/proline ABC transporter permease;protein_id=AAC75725.1;db_xref=GI:1789033;db_xref=ASAP:ABE-0008816;db_xref=UniProtKB/Swiss-Prot:P14176;db_xref=EcoGene:EG10772 EMBL gene 2807132 2808124 . + . ID=.5818;gene=proX;locus_tag=b2679;gene_synonym=ECK2673;gene_synonym=JW2654;gene_synonym=osrA;gene_synonym=proU;db_xref=EcoGene:EG10773 EMBL CDS 2807132 2808124 . + 0 ID=.5819;gene=proX;locus_tag=b2679;gene_synonym=ECK2673;gene_synonym=JW2654;gene_synonym=osrA;gene_synonym=proU;function=transport%3B Osmotic adaptation;note=high-affinity transport system for glycine betaine and proline%3B periplasmic-binding component of ABC superfamily%3B GO_component: GO:0042597 - periplasmic space%3B GO_function: GO:0015596 - glycine betaine/proline porter activity%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0006561 - proline biosynthetic process%3B GO_process: GO:0006545 - glycine biosynthetic process%3B GO_process: GO:0006578 - betaine biosynthetic process%3B GO_process: GO:0006970 - response to osmotic stress;codon_start=1;transl_table=11;product=glycine betaine/proline ABC transporter periplasmic binding protein%3B cold shock protein;protein_id=AAC75726.1;db_xref=GI:1789034;db_xref=ASAP:ABE-0008818;db_xref=UniProtKB/Swiss-Prot:P0AFM2;db_xref=EcoGene:EG10773 EMBL repeat_region 2808131 2808214 . + . ID=.5820;note=REP193 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 2808316 2809493 . + . ID=.5821;gene=ygaY;locus_tag=b2681;gene_synonym=ECK2674;gene_synonym=JW2655;gene_synonym=ygaX;pseudo=true;db_xref=EcoGene:EG13527 EMBL biological_region 2808316 2809493 . + 0 ID=.5822;featflags=type:CDS;gene=ygaY;locus_tag=b2681;gene_synonym=ECK2674;gene_synonym=JW2655;gene_synonym=ygaX;note=pseudogene%2C major facilitator transporter superfamily%3Bputative transport%3B Not classified%3B putative transport protein%3B GO_process: GO:0006950 - response to stress;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0008822;db_xref=ASAP:ABE-0008824;db_xref=UniProtKB/Swiss-Prot:P76628;db_xref=EcoGene:EG13527 EMBL CDS 2808316 2808576 . + 0 Parent=.5822 EMBL CDS 2808570 2809493 . + 0 Parent=.5822 EMBL gene 2809617 2810354 . + . ID=.5825;gene=ygaZ;locus_tag=b2682;gene_synonym=ECK2676;gene_synonym=JW2657;db_xref=EcoGene:EG13528 EMBL CDS 2809617 2810354 . + 0 ID=.5826;gene=ygaZ;locus_tag=b2682;gene_synonym=ECK2676;gene_synonym=JW2657;codon_start=1;transl_table=11;product=putative L-valine exporter%2C norvaline resistance protein;protein_id=AAC75729.1;db_xref=GI:1789038;db_xref=ASAP:ABE-0008829;db_xref=UniProtKB/Swiss-Prot:P76630;db_xref=EcoGene:EG13528 EMBL gene 2810344 2810679 . + . ID=.5827;gene=ygaH;locus_tag=b2683;gene_synonym=ECK2677;gene_synonym=JW2658;db_xref=EcoGene:EG12940 EMBL CDS 2810344 2810679 . + 0 ID=.5828;gene=ygaH;locus_tag=b2683;gene_synonym=ECK2677;gene_synonym=JW2658;codon_start=1;transl_table=11;product=putative L-valine exporter%2C norvaline resistance protein;protein_id=AAC75730.1;db_xref=GI:1789039;db_xref=ASAP:ABE-0008831;db_xref=UniProtKB/Swiss-Prot:P43667;db_xref=EcoGene:EG12940 EMBL gene 2810770 2811300 . + . ID=.5829;gene=mprA;locus_tag=b2684;gene_synonym=ECK2678;gene_synonym=emrR;gene_synonym=JW2659;db_xref=EcoGene:EG10603 EMBL CDS 2810770 2811300 . + 0 ID=.5830;gene=mprA;locus_tag=b2684;gene_synonym=ECK2678;gene_synonym=emrR;gene_synonym=JW2659;function=regulator%3B Plasmid-related functions;note=regulator of plasmid mcrB operon (microcin B17 synthesis)%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription%3B GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=transcriptional repressor of microcin B17 synthesis and multidrug efflux;protein_id=AAC75731.1;db_xref=GI:1789040;db_xref=ASAP:ABE-0008834;db_xref=UniProtKB/Swiss-Prot:P0ACR9;db_xref=EcoGene:EG10603 EMBL gene 2811427 2812599 . + . ID=.5831;gene=emrA;locus_tag=b2685;gene_synonym=ECK2679;gene_synonym=JW2660;db_xref=EcoGene:EG11354 EMBL CDS 2811427 2812599 . + 0 ID=.5832;gene=emrA;locus_tag=b2685;gene_synonym=ECK2679;gene_synonym=JW2660;function=transport%3B Drug/analog sensitivity;note=multidrug resistance secretion protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=multidrug efflux system;protein_id=AAC75732.1;db_xref=GI:1789041;db_xref=ASAP:ABE-0008838;db_xref=UniProtKB/Swiss-Prot:P27303;db_xref=EcoGene:EG11354 EMBL gene 2812616 2814154 . + . ID=.5833;gene=emrB;locus_tag=b2686;gene_synonym=ECK2680;gene_synonym=JW2661;db_xref=EcoGene:EG11439 EMBL CDS 2812616 2814154 . + 0 ID=.5834;gene=emrB;locus_tag=b2686;gene_synonym=ECK2680;gene_synonym=JW2661;function=putative transport%3B Drug/analog sensitivity;note=multidrug resistance%3B probably membrane translocase%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=multidrug efflux system protein;protein_id=AAC75733.1;db_xref=GI:1789042;db_xref=ASAP:ABE-0008840;db_xref=UniProtKB/Swiss-Prot:P0AEJ0;db_xref=EcoGene:EG11439 EMBL gene 2814218 2814733 . - . ID=.5835;gene=luxS;locus_tag=b2687;gene_synonym=ECK2681;gene_synonym=JW2662;gene_synonym=ygaG;db_xref=EcoGene:EG12712 EMBL CDS 2814218 2814733 . - 0 ID=.5836;gene=luxS;locus_tag=b2687;gene_synonym=ECK2681;gene_synonym=JW2662;gene_synonym=ygaG;codon_start=1;transl_table=11;product=S-ribosylhomocysteine lyase;protein_id=AAC75734.1;db_xref=GI:1789043;db_xref=ASAP:ABE-0008842;db_xref=UniProtKB/Swiss-Prot:P45578;db_xref=EcoGene:EG12712 EMBL gene 2814802 2814879 . + . ID=.5837;gene=micA;locus_tag=b4442;gene_synonym=ECK2682;gene_synonym=JWR0246;gene_synonym=psrA10;gene_synonym=sraD;db_xref=EcoGene:EG31156 EMBL ncRNA 2814802 2814879 . + . ID=.5838;ncrna_class=antisense_RNA;gene=micA;locus_tag=b4442;gene_synonym=ECK2682;gene_synonym=JWR0246;gene_synonym=psrA10;gene_synonym=sraD;product=sRNA antisense regulator of ompA%2C lamB%2C ompX%2C and phoP%3B Hfq-dependent;note=identified in a large scale screen;db_xref=ASAP:ABE-0047262;db_xref=EcoGene:EG31156 EMBL gene 2814883 2816439 . - . ID=.5839;gene=gshA;locus_tag=b2688;gene_synonym=ECK2683;gene_synonym=gshI;gene_synonym=JW2663;db_xref=EcoGene:EG10418 EMBL CDS 2814883 2816439 . - 0 ID=.5840;gene=gshA;locus_tag=b2688;gene_synonym=ECK2683;gene_synonym=gshI;gene_synonym=JW2663;ec_number=6.3.2.2;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Thioredoxin%2C glutaredoxin%2C glutathione;experiment=N-terminus verified by Edman degradation: PMID 2872655;note=GO_process: GO:0006750 - glutathione biosynthetic process;codon_start=1;transl_table=11;product=glutamate-cysteine ligase;protein_id=AAC75735.1;db_xref=GI:1789044;db_xref=ASAP:ABE-0008845;db_xref=UniProtKB/Swiss-Prot:P0A6W9;db_xref=EcoGene:EG10418 EMBL gene 2816512 2816940 . - . ID=.5841;gene=yqaA;locus_tag=b2689;gene_synonym=ECK2684;gene_synonym=JW2664;db_xref=EcoGene:EG13529 EMBL CDS 2816512 2816940 . - 0 ID=.5842;gene=yqaA;locus_tag=b2689;gene_synonym=ECK2684;gene_synonym=JW2664;note=GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=COG1238 family inner membrane protein;protein_id=AAC75736.1;db_xref=GI:1789045;db_xref=ASAP:ABE-0008847;db_xref=UniProtKB/Swiss-Prot:P0ADR0;db_xref=EcoGene:EG13529 EMBL gene 2816937 2817503 . - . ID=.5843;gene=yqaB;locus_tag=b2690;gene_synonym=ECK2685;gene_synonym=JW2665;db_xref=EcoGene:EG13530 EMBL CDS 2816937 2817503 . - 0 ID=.5844;gene=yqaB;locus_tag=b2690;gene_synonym=ECK2685;gene_synonym=JW2665;function=putative enzyme%3B Not classified;note=putative phosphatase;codon_start=1;transl_table=11;product=fructose-1-P and 6-phosphogluconate phosphatase;protein_id=AAC75737.1;db_xref=GI:1789046;db_xref=ASAP:ABE-0008850;db_xref=UniProtKB/Swiss-Prot:P77475;db_xref=EcoGene:EG13530 EMBL gene 2817784 2817860 . - . ID=.5845;gene=argQ;locus_tag=b2691;gene_synonym=argVdelta;gene_synonym=ECK2686;gene_synonym=JWR0057;db_xref=EcoGene:EG30013 EMBL tRNA 2817784 2817860 . - . ID=.5846;gene=argQ;locus_tag=b2691;gene_synonym=argVdelta;gene_synonym=ECK2686;gene_synonym=JWR0057;product=tRNA-Arg;note=anticodon: ACG;db_xref=ASAP:ABE-0008856;db_xref=EcoGene:EG30013 EMBL gene 2818059 2818135 . - . ID=.5847;gene=argZ;locus_tag=b2692;gene_synonym=argVgamma;gene_synonym=ECK2687;gene_synonym=JWR0058;db_xref=EcoGene:EG30019 EMBL tRNA 2818059 2818135 . - . ID=.5848;gene=argZ;locus_tag=b2692;gene_synonym=argVgamma;gene_synonym=ECK2687;gene_synonym=JWR0058;product=tRNA-Arg;note=anticodon: ACG;db_xref=ASAP:ABE-0008858;db_xref=EcoGene:EG30019 EMBL gene 2818198 2818274 . - . ID=.5849;gene=argY;locus_tag=b2693;gene_synonym=argVbeta;gene_synonym=ECK2688;gene_synonym=JWR0059;db_xref=EcoGene:EG30018 EMBL tRNA 2818198 2818274 . - . ID=.5850;gene=argY;locus_tag=b2693;gene_synonym=argVbeta;gene_synonym=ECK2688;gene_synonym=JWR0059;product=tRNA-Arg;note=anticodon: ACG;db_xref=ASAP:ABE-0008860;db_xref=EcoGene:EG30018 EMBL gene 2818473 2818549 . - . ID=.5851;gene=argV;locus_tag=b2694;gene_synonym=argValpha;gene_synonym=ECK2689;gene_synonym=JWR0060;db_xref=EcoGene:EG30015 EMBL tRNA 2818473 2818549 . - . ID=.5852;gene=argV;locus_tag=b2694;gene_synonym=argValpha;gene_synonym=ECK2689;gene_synonym=JWR0060;product=tRNA-Arg;note=anticodon: ACG;db_xref=ASAP:ABE-0008862;db_xref=EcoGene:EG30015 EMBL gene 2818553 2818645 . - . ID=.5853;gene=serV;locus_tag=b2695;gene_synonym=ECK2690;gene_synonym=JWR0061;gene_synonym=supD;db_xref=EcoGene:EG30095 EMBL tRNA 2818553 2818645 . - . ID=.5854;gene=serV;locus_tag=b2695;gene_synonym=ECK2690;gene_synonym=JWR0061;gene_synonym=supD;product=tRNA-Ser;note=anticodon: GCU;db_xref=ASAP:ABE-0008864;db_xref=EcoGene:EG30095 EMBL gene 2818961 2819146 . - . ID=.5855;gene=csrA;locus_tag=b2696;gene_synonym=ECK2691;gene_synonym=JW2666;gene_synonym=zfiA;db_xref=EcoGene:EG11447 EMBL CDS 2818961 2819146 . - 0 ID=.5856;gene=csrA;locus_tag=b2696;gene_synonym=ECK2691;gene_synonym=JW2666;gene_synonym=zfiA;function=regulator%3B Global regulatory functions;note=carbon storage regulator%3B controls glycogen synthesis%2C gluconeogenesis%2C cell size and surface properties%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0006096 - glycolysis%3B GO_process: GO:0006094 - gluconeogenesis%3B GO_process: GO:0006401 - RNA catabolic process%3B GO_process: GO:0009386 - translational attenuation%3B GO_process: GO:0042330 - taxis;codon_start=1;transl_table=11;product=pleiotropic regulatory protein for carbon source metabolism;protein_id=AAC75738.1;db_xref=GI:1789047;db_xref=ASAP:ABE-0008866;db_xref=UniProtKB/Swiss-Prot:P69913;db_xref=EcoGene:EG11447 EMBL gene 2819381 2822011 . - . ID=.5857;gene=alaS;locus_tag=b2697;gene_synonym=act;gene_synonym=ala-act;gene_synonym=ECK2692;gene_synonym=JW2667;gene_synonym=lovB;db_xref=EcoGene:EG10034 EMBL CDS 2819381 2822011 . - 0 ID=.5858;gene=alaS;locus_tag=b2697;gene_synonym=act;gene_synonym=ala-act;gene_synonym=ECK2692;gene_synonym=JW2667;gene_synonym=lovB;ec_number=6.1.1.7;function=enzyme%3B Aminoacyl tRNA synthetases%2C tRNA modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006418 - tRNA aminoacylation for protein translation;codon_start=1;transl_table=11;product=alanyl-tRNA synthetase;protein_id=AAC75739.1;db_xref=GI:1789048;db_xref=ASAP:ABE-0008869;db_xref=UniProtKB/Swiss-Prot:P00957;db_xref=EcoGene:EG10034 EMBL gene 2822139 2822639 . - . ID=.5859;gene=recX;locus_tag=b2698;gene_synonym=ECK2693;gene_synonym=JW2668;gene_synonym=oraA;db_xref=EcoGene:EG12080 EMBL CDS 2822139 2822639 . - 0 ID=.5860;gene=recX;locus_tag=b2698;gene_synonym=ECK2693;gene_synonym=JW2668;gene_synonym=oraA;function=putative regulator%3B Not classified;note=regulator%2C OraA protein;codon_start=1;transl_table=11;product=regulatory protein for RecA;protein_id=AAC75740.1;db_xref=GI:1789050;db_xref=ASAP:ABE-0008872;db_xref=UniProtKB/Swiss-Prot:P33596;db_xref=EcoGene:EG12080 EMBL gene 2822708 2823769 . - . ID=.5861;gene=recA;locus_tag=b2699;gene_synonym=ECK2694;gene_synonym=JW2669;gene_synonym=lexB;gene_synonym=recH;gene_synonym=rnmB;gene_synonym=srf;gene_synonym=tif;gene_synonym=umuB;gene_synonym=umuR;gene_synonym=zab;db_xref=EcoGene:EG10823 EMBL CDS 2822708 2823769 . - 0 ID=.5862;gene=recA;locus_tag=b2699;gene_synonym=ECK2694;gene_synonym=JW2669;gene_synonym=lexB;gene_synonym=recH;gene_synonym=rnmB;gene_synonym=srf;gene_synonym=tif;gene_synonym=umuB;gene_synonym=umuR;gene_synonym=zab;function=enzyme%3B DNA - replication%2C repair%2C restriction/modification;note=DNA strand exchange and renaturation%2C DNA-dependent ATPase%2C DNA- and ATP-dependent coprotease%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0008233 - peptidase activity%3B GO_process: GO:0006310 - DNA recombination%3B GO_process: GO:0006281 - DNA repair%3B GO_process: GO:0006508 - proteolysis%3B GO_process: GO:0009432 - SOS response;codon_start=1;transl_table=11;product=DNA recombination and repair protein%3B ssDNA-dependent ATPase%3B synaptase%3B ssDNA and dsDNA binding protein%3B ATP-dependent homologous DNA strand exchanger%3B recombinase A%3B LexA autocleavage cofactor;protein_id=AAC75741.1;db_xref=GI:1789051;db_xref=ASAP:ABE-0008876;db_xref=UniProtKB/Swiss-Prot:P0A7G6;db_xref=EcoGene:EG10823 EMBL gene 2823849 2824346 . - . ID=.5863;gene=pncC;locus_tag=b2700;gene_synonym=ECK2695;gene_synonym=JW2670;gene_synonym=ygaD;db_xref=EcoGene:EG12698 EMBL CDS 2823849 2824346 . - 0 ID=.5864;gene=pncC;locus_tag=b2700;gene_synonym=ECK2695;gene_synonym=JW2670;gene_synonym=ygaD;ec_number=3.5.1.42;function=enzyme%3B NMN catabolism;codon_start=1;transl_table=11;product=nicotinamide-nucleotide amidohydrolase%3B NMN amidohydrolase;protein_id=AAC75742.1;db_xref=GI:1789052;db_xref=ASAP:ABE-0008882;db_xref=UniProtKB/Swiss-Prot:P0A6G3;db_xref=EcoGene:EG12698 EMBL gene 2824491 2825576 . - . ID=.5865;gene=mltB;locus_tag=b2701;gene_synonym=ECK2696;gene_synonym=JW2671;db_xref=EcoGene:EG12699 EMBL CDS 2824491 2825576 . - 0 ID=.5866;gene=mltB;locus_tag=b2701;gene_synonym=ECK2696;gene_synonym=JW2671;ec_number=3.2.1.-;function=enzyme%3B Murein sacculus%2C peptidoglycan;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane%3B GO_process: GO:0009252 - peptidoglycan biosynthetic process;codon_start=1;transl_table=11;product=membrane-bound lytic murein transglycosylase B;protein_id=AAC75743.1;db_xref=GI:1789053;db_xref=ASAP:ABE-0008885;db_xref=UniProtKB/Swiss-Prot:P41052;db_xref=EcoGene:EG12699 EMBL gene 2825832 2826395 . + . ID=.5867;gene=srlA;locus_tag=b2702;gene_synonym=ECK2697;gene_synonym=gutA;gene_synonym=JW5429;gene_synonym=sbl;db_xref=EcoGene:EG10969 EMBL CDS 2825832 2826395 . + 0 ID=.5868;gene=srlA;locus_tag=b2702;gene_synonym=ECK2697;gene_synonym=gutA;gene_synonym=JW5429;gene_synonym=sbl;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=PTS system%2C glucitol/sorbitol-specific IIC component%2C one of two%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=glucitol/sorbitol-specific enzyme IIC component of PTS;protein_id=AAT48148.1;db_xref=GI:48994904;db_xref=ASAP:ABE-0008890;db_xref=UniProtKB/Swiss-Prot:P56579;db_xref=EcoGene:EG10969 EMBL gene 2826392 2827351 . + . ID=.5869;gene=srlE;locus_tag=b2703;gene_synonym=ECK2698;gene_synonym=gutA;gene_synonym=gutE;gene_synonym=JW5430;gene_synonym=sbl;gene_synonym=srlA;db_xref=EcoGene:EG14373 EMBL CDS 2826392 2827351 . + 0 ID=.5870;gene=srlE;locus_tag=b2703;gene_synonym=ECK2698;gene_synonym=gutA;gene_synonym=gutE;gene_synonym=JW5430;gene_synonym=sbl;gene_synonym=srlA;ec_number=2.7.1.69;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=PTS system%2C glucitol/sorbitol-specific IIB component and second of two IIC components%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=glucitol/sorbitol-specific enzyme IIB component of PTS;protein_id=AAT48149.1;db_xref=GI:48994905;db_xref=ASAP:ABE-0008892;db_xref=UniProtKB/Swiss-Prot:P56580;db_xref=EcoGene:EG14373 EMBL gene 2827362 2827733 . + . ID=.5871;gene=srlB;locus_tag=b2704;gene_synonym=ECK2699;gene_synonym=gutB;gene_synonym=JW2673;db_xref=EcoGene:EG10970 EMBL CDS 2827362 2827733 . + 0 ID=.5872;gene=srlB;locus_tag=b2704;gene_synonym=ECK2699;gene_synonym=gutB;gene_synonym=JW2673;ec_number=2.7.1.69;function=enzyme%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=PTS system%2C glucitol/sorbitol-specific enzyme IIA component%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=glucitol/sorbitol-specific enzyme IIA component of PTS;protein_id=AAC75746.1;db_xref=GI:1789056;db_xref=ASAP:ABE-0008894;db_xref=UniProtKB/Swiss-Prot:P05706;db_xref=EcoGene:EG10970 EMBL gene 2827737 2828516 . + . ID=.5873;gene=srlD;locus_tag=b2705;gene_synonym=ECK2700;gene_synonym=gutD;gene_synonym=JW2674;db_xref=EcoGene:EG10971 EMBL CDS 2827737 2828516 . + 0 ID=.5874;gene=srlD;locus_tag=b2705;gene_synonym=ECK2700;gene_synonym=gutD;gene_synonym=JW2674;ec_number=1.1.1.140;function=enzyme%3B Degradation of small molecules: Carbon compounds;experiment=N-terminus verified by Edman degradation: PMID 6384188;note=glucitol (sorbitol)-6-phosphate dehydrogenase%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=sorbitol-6-phosphate dehydrogenase;protein_id=AAC75747.1;db_xref=GI:1789057;db_xref=ASAP:ABE-0008896;db_xref=UniProtKB/Swiss-Prot:P05707;db_xref=EcoGene:EG10971 EMBL repeat_region 2828561 2828589 . + . ID=.5875;note=REP194 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 2828621 2828980 . + . ID=.5876;gene=srlM;locus_tag=b2706;gene_synonym=ECK2701;gene_synonym=gutM;gene_synonym=JW2675;db_xref=EcoGene:EG10972 EMBL CDS 2828621 2828980 . + 0 ID=.5877;gene=srlM;locus_tag=b2706;gene_synonym=ECK2701;gene_synonym=gutM;gene_synonym=JW2675;function=regulator%3B Degradation of small molecules: Carbon compounds;note=glucitol operon activator%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=sorbitol%3Dresponsive srl operon transcriptional activator;protein_id=AAC75748.1;db_xref=GI:1789058;db_xref=ASAP:ABE-0008898;db_xref=UniProtKB/Swiss-Prot:P15081;db_xref=EcoGene:EG10972 EMBL gene 2829047 2829820 . + . ID=.5878;gene=srlR;locus_tag=b2707;gene_synonym=ECK2702;gene_synonym=gutR;gene_synonym=JW2676;db_xref=EcoGene:EG10974 EMBL CDS 2829047 2829820 . + 0 ID=.5879;gene=srlR;locus_tag=b2707;gene_synonym=ECK2702;gene_synonym=gutR;gene_synonym=JW2676;function=regulator%3B Degradation of small molecules: Carbon compounds;note=regulator for gut (srl)%2C glucitol operon%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0006350 - transcription%3B GO_process: GO:0006355 - regulation of transcription%2C DNA-dependent;codon_start=1;transl_table=11;product=sorbitol-inducible srl operon transcriptional repressor;protein_id=AAC75749.1;db_xref=GI:1789059;db_xref=ASAP:ABE-0008900;db_xref=UniProtKB/Swiss-Prot:P15082;db_xref=EcoGene:EG10974 EMBL gene 2829813 2830778 . + . ID=.5880;gene=srlQ;locus_tag=b2708;gene_synonym=ECK2703;gene_synonym=gutQ;gene_synonym=JW5431;db_xref=EcoGene:EG10973 EMBL CDS 2829813 2830778 . + 0 ID=.5881;gene=srlQ;locus_tag=b2708;gene_synonym=ECK2703;gene_synonym=gutQ;gene_synonym=JW5431;codon_start=1;transl_table=11;product=D-arabinose 5-phosphate isomerase;protein_id=AAC75750.2;db_xref=GI:87082151;db_xref=ASAP:ABE-0008902;db_xref=UniProtKB/Swiss-Prot:P17115;db_xref=EcoGene:EG10973 EMBL gene 2830775 2832289 . - . ID=.5882;gene=norR;locus_tag=b2709;gene_synonym=ECK2704;gene_synonym=JW5843;gene_synonym=ygaA;db_xref=EcoGene:EG12108 EMBL CDS 2830775 2832289 . - 0 ID=.5883;gene=norR;locus_tag=b2709;gene_synonym=ECK2704;gene_synonym=JW5843;gene_synonym=ygaA;function=regulator%3B Not classified;note=putative 2-component transcriptional regulator%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=anaerobic nitric oxide reductase DNA-binding transcriptional activator;protein_id=AAC75751.2;db_xref=GI:87082152;db_xref=ASAP:ABE-0008904;db_xref=UniProtKB/Swiss-Prot:P37013;db_xref=EcoGene:EG12108 EMBL gene 2832476 2833915 . + . ID=.5884;gene=norV;locus_tag=b2710;gene_synonym=ECK2705;gene_synonym=flrd;gene_synonym=JW2680;gene_synonym=ygaI;gene_synonym=ygaJ;gene_synonym=ygaK;db_xref=EcoGene:EG12963 EMBL CDS 2832476 2833915 . + 0 ID=.5885;gene=norV;locus_tag=b2710;gene_synonym=ECK2705;gene_synonym=flrd;gene_synonym=JW2680;gene_synonym=ygaI;gene_synonym=ygaJ;gene_synonym=ygaK;function=putative enzyme%3B Not classified;note=putative flavodoxin%3B GO_function: GO:0009055 - electron carrier activity;codon_start=1;transl_table=11;product=anaerobic nitric oxide reductase flavorubredoxin;protein_id=AAC75752.1;db_xref=GI:1789064;db_xref=ASAP:ABE-0008910;db_xref=UniProtKB/Swiss-Prot:Q46877;db_xref=EcoGene:EG12963 EMBL gene 2833912 2835045 . + . ID=.5886;gene=norW;locus_tag=b2711;gene_synonym=ECK2706;gene_synonym=JW2681;gene_synonym=ygaL;gene_synonym=ygbD;db_xref=EcoGene:EG12450 EMBL CDS 2833912 2835045 . + 0 ID=.5887;gene=norW;locus_tag=b2711;gene_synonym=ECK2706;gene_synonym=JW2681;gene_synonym=ygaL;gene_synonym=ygbD;ec_number=1.18.1.-;function=putative enzyme%3B Not classified;note=putative oxidoreductase;codon_start=1;transl_table=11;product=NADH:flavorubredoxin oxidoreductase;protein_id=AAC75753.1;db_xref=GI:1789065;db_xref=ASAP:ABE-0008912;db_xref=UniProtKB/Swiss-Prot:P37596;db_xref=EcoGene:EG12450 EMBL repeat_region 2835067 2835148 . + . ID=.5888;note=REP195 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 2835173 2837425 . - . ID=.5889;gene=hypF;locus_tag=b2712;gene_synonym=ECK2707;gene_synonym=hydA;gene_synonym=JW5433;db_xref=EcoGene:EG11551 EMBL CDS 2835173 2837425 . - 0 ID=.5890;gene=hypF;locus_tag=b2712;gene_synonym=ECK2707;gene_synonym=hydA;gene_synonym=JW5433;function=regulator%3B Energy metabolism%2C carbon: Anaerobic respiration;note=transcriptional regulatory protein%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=carbamoyl phosphate phosphatase and [NiFe] hydrogenase maturation protein;protein_id=AAC75754.1;db_xref=GI:2367152;db_xref=ASAP:ABE-0008915;db_xref=UniProtKB/Swiss-Prot:P30131;db_xref=EcoGene:EG11551 EMBL repeat_region 2837465 2837491 . + . ID=.5891;note=REP196 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 2837578 2838105 . - . ID=.5892;gene=hydN;locus_tag=b2713;gene_synonym=ECK2708;gene_synonym=JW2683;db_xref=EcoGene:EG11552 EMBL CDS 2837578 2838105 . - 0 ID=.5893;gene=hydN;locus_tag=b2713;gene_synonym=ECK2708;gene_synonym=JW2683;function=enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;note=involved in electron transport from formate to hydrogen%2C Fe-S centers%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=formate dehydrogenase-H%2C [4Fe-4S] ferredoxin subunit;protein_id=AAC75755.1;db_xref=GI:1789067;db_xref=ASAP:ABE-0008919;db_xref=UniProtKB/Swiss-Prot:P0AAK4;db_xref=EcoGene:EG11552 EMBL gene 2838254 2839264 . - . ID=.5894;gene=ascG;locus_tag=b2714;gene_synonym=ECK2709;gene_synonym=JW5434;gene_synonym=sac;db_xref=EcoGene:EG10087 EMBL CDS 2838254 2839264 . - 0 ID=.5895;gene=ascG;locus_tag=b2714;gene_synonym=ECK2709;gene_synonym=JW5434;gene_synonym=sac;function=regulator%3B Degradation of small molecules: Carbon compounds;note=ascBF operon repressor%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=asc operon transcriptional repressor%3B prpBC operon repressor;protein_id=AAC75756.2;db_xref=GI:345297177;db_xref=ASAP:ABE-0008922;db_xref=UniProtKB/Swiss-Prot:P24242;db_xref=EcoGene:EG10087 EMBL gene 2839524 2840981 . + . ID=.5896;gene=ascF;locus_tag=b2715;gene_synonym=ECK2710;gene_synonym=JW5435;gene_synonym=sac;db_xref=EcoGene:EG10086 EMBL CDS 2839524 2840981 . + 0 ID=.5897;gene=ascF;locus_tag=b2715;gene_synonym=ECK2710;gene_synonym=JW5435;gene_synonym=sac;ec_number=2.7.1.69;function=enzyme%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=PTS system enzyme II ABC (asc)%2C cryptic%2C transports specific beta-glucosides%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=cellobiose/arbutin/salicin-specific PTS enzymes%2C IIB and IC components;protein_id=AAT48150.1;db_xref=GI:48994906;db_xref=ASAP:ABE-0008926;db_xref=UniProtKB/Swiss-Prot:P24241;db_xref=EcoGene:EG10086 EMBL gene 2840990 2842414 . + . ID=.5898;gene=ascB;locus_tag=b2716;gene_synonym=ECK2711;gene_synonym=JW2686;gene_synonym=sac;db_xref=EcoGene:EG10085 EMBL CDS 2840990 2842414 . + 0 ID=.5899;gene=ascB;locus_tag=b2716;gene_synonym=ECK2711;gene_synonym=JW2686;gene_synonym=sac;ec_number=3.2.1.86;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=6-phospho-beta-glucosidase%3B cryptic%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=cryptic 6-phospho-beta-glucosidase;protein_id=AAC75758.1;db_xref=GI:1789070;db_xref=ASAP:ABE-0008928;db_xref=UniProtKB/Swiss-Prot:P24240;db_xref=EcoGene:EG10085 EMBL repeat_region 2842423 2842501 . + . ID=.5900;note=REP197 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 2842573 2843043 . - . ID=.5901;gene=hycI;locus_tag=b2717;gene_synonym=ECK2712;gene_synonym=JW2687;db_xref=EcoGene:EG13396 EMBL CDS 2842573 2843043 . - 0 ID=.5902;gene=hycI;locus_tag=b2717;gene_synonym=ECK2712;gene_synonym=JW2687;ec_number=3.4.-.-;function=enzyme%3B Degradation of proteins%2C peptides%2C glyco;note=protease involved in processing C-terminal end of the large subunit of hydrogenase 3%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=protease involved in processing C-terminal end of HycE;protein_id=AAC75759.1;db_xref=GI:1789072;db_xref=ASAP:ABE-0008931;db_xref=UniProtKB/Swiss-Prot:P0AEV9;db_xref=EcoGene:EG13396 EMBL gene 2843036 2843446 . - . ID=.5903;gene=hycH;locus_tag=b2718;gene_synonym=ECK2713;gene_synonym=hevH;gene_synonym=JW2688;db_xref=EcoGene:EG10481 EMBL CDS 2843036 2843446 . - 0 ID=.5904;gene=hycH;locus_tag=b2718;gene_synonym=ECK2713;gene_synonym=hevH;gene_synonym=JW2688;function=factor%3B Energy metabolism%2C carbon: Fermentation;note=processing of large subunit (HycE) of hydrogenase 3 (part of the FHL complex)%3B GO_process: GO:0006113 - fermentation;codon_start=1;transl_table=11;product=hydrogenase 3 maturation protein;protein_id=AAC75760.1;db_xref=GI:1789073;db_xref=ASAP:ABE-0008933;db_xref=UniProtKB/Swiss-Prot:P0AEV7;db_xref=EcoGene:EG10481 EMBL gene 2843443 2844210 . - . ID=.5905;gene=hycG;locus_tag=b2719;gene_synonym=ECK2714;gene_synonym=hevG;gene_synonym=JW2689;db_xref=EcoGene:EG10480 EMBL CDS 2843443 2844210 . - 0 ID=.5906;gene=hycG;locus_tag=b2719;gene_synonym=ECK2714;gene_synonym=hevG;gene_synonym=JW2689;ec_number=1.12.7.2;function=phenotype%3B Energy metabolism%2C carbon: Fermentation;note=hydrogenase activity%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006113 - fermentation%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=hydrogenase 3 and formate hydrogenase complex%2C HycG subunit;protein_id=AAC75761.1;db_xref=GI:1789074;db_xref=ASAP:ABE-0008936;db_xref=UniProtKB/Swiss-Prot:P16433;db_xref=EcoGene:EG10480 EMBL gene 2844210 2844752 . - . ID=.5907;gene=hycF;locus_tag=b2720;gene_synonym=ECK2715;gene_synonym=hevF;gene_synonym=JW2690;db_xref=EcoGene:EG10479 EMBL CDS 2844210 2844752 . - 0 ID=.5908;gene=hycF;locus_tag=b2720;gene_synonym=ECK2715;gene_synonym=hevF;gene_synonym=JW2690;ec_number=1.12.7.2;function=putative enzyme%3B Energy metabolism%2C carbon: Fermentation;note=probable iron-sulfur protein of hydrogenase 3 (part of FHL complex)%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006113 - fermentation%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=formate hydrogenlyase complex iron-sulfur protein;protein_id=AAC75762.1;db_xref=GI:1789075;db_xref=ASAP:ABE-0008942;db_xref=UniProtKB/Swiss-Prot:P16432;db_xref=EcoGene:EG10479 EMBL gene 2844762 2846471 . - . ID=.5909;gene=hycE;locus_tag=b2721;gene_synonym=ECK2716;gene_synonym=hevE;gene_synonym=JW2691;db_xref=EcoGene:EG10478 EMBL CDS 2844762 2846471 . - 0 ID=.5910;gene=hycE;locus_tag=b2721;gene_synonym=ECK2716;gene_synonym=hevE;gene_synonym=JW2691;ec_number=1.12.7.2;function=enzyme%3B Energy metabolism%2C carbon: Fermentation;experiment=N-terminus verified by Edman degradation: PMID 8125094;note=large subunit of hydrogenase 3 (part of FHL complex)%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006113 - fermentation%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=hydrogenase 3%2C large subunit;protein_id=AAC75763.1;db_xref=GI:1789076;db_xref=ASAP:ABE-0008944;db_xref=UniProtKB/Swiss-Prot:P16431;db_xref=EcoGene:EG10478 EMBL gene 2846489 2847412 . - . ID=.5911;gene=hycD;locus_tag=b2722;gene_synonym=ECK2717;gene_synonym=hevD;gene_synonym=JW2692;db_xref=EcoGene:EG10477 EMBL CDS 2846489 2847412 . - 0 ID=.5912;gene=hycD;locus_tag=b2722;gene_synonym=ECK2717;gene_synonym=hevD;gene_synonym=JW2692;function=enzyme%3B Energy metabolism%2C carbon: Fermentation;note=membrane-spanning protein of hydrogenase 3 (part of FHL complex)%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006113 - fermentation;codon_start=1;transl_table=11;product=hydrogenase 3%2C membrane subunit;protein_id=AAC75764.1;db_xref=GI:1789077;db_xref=ASAP:ABE-0008946;db_xref=UniProtKB/Swiss-Prot:P16430;db_xref=EcoGene:EG10477 EMBL gene 2847415 2849241 . - . ID=.5913;gene=hycC;locus_tag=b2723;gene_synonym=ECK2718;gene_synonym=hevC;gene_synonym=JW2693;db_xref=EcoGene:EG10476 EMBL CDS 2847415 2849241 . - 0 ID=.5914;gene=hycC;locus_tag=b2723;gene_synonym=ECK2718;gene_synonym=hevC;gene_synonym=JW2693;function=enzyme%3B Energy metabolism%2C carbon: Fermentation;note=membrane-spanning protein of hydrogenase 3 (part of FHL complex)%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006113 - fermentation;codon_start=1;transl_table=11;product=hydrogenase 3%2C membrane subunit;protein_id=AAC75765.1;db_xref=GI:2367154;db_xref=ASAP:ABE-0008948;db_xref=UniProtKB/Swiss-Prot:P16429;db_xref=EcoGene:EG10476 EMBL gene 2849238 2849849 . - . ID=.5915;gene=hycB;locus_tag=b2724;gene_synonym=ECK2719;gene_synonym=hevB;gene_synonym=JW2694;db_xref=EcoGene:EG10475 EMBL CDS 2849238 2849849 . - 0 ID=.5916;gene=hycB;locus_tag=b2724;gene_synonym=ECK2719;gene_synonym=hevB;gene_synonym=JW2694;ec_number=1.12.7.2;function=putative enzyme%3B Energy metabolism%2C carbon: Fermentation;note=probable small subunit of hydrogenase-3%2C iron-sulfur protein (part of formate hydrogenlyase (FHL) complex)%3B GO_process: GO:0006113 - fermentation%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=hydrogenase 3%2C Fe-S subunit;protein_id=AAC75766.1;db_xref=GI:1789079;db_xref=ASAP:ABE-0008950;db_xref=UniProtKB/Swiss-Prot:P0AAK1;db_xref=EcoGene:EG10475 EMBL gene 2849974 2850435 . - . ID=.5917;gene=hycA;locus_tag=b2725;gene_synonym=ECK2720;gene_synonym=hevA;gene_synonym=JW2695;db_xref=EcoGene:EG10474 EMBL CDS 2849974 2850435 . - 0 ID=.5918;gene=hycA;locus_tag=b2725;gene_synonym=ECK2720;gene_synonym=hevA;gene_synonym=JW2695;function=regulator%3B Energy metabolism%2C carbon: Fermentation;note=transcriptional repression of hyc and hyp operons%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006113 - fermentation%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=regulator of the transcriptional regulator FhlA;protein_id=AAC75767.1;db_xref=GI:1789080;db_xref=ASAP:ABE-0008952;db_xref=UniProtKB/Swiss-Prot:P0AEV4;db_xref=EcoGene:EG10474 EMBL gene 2850647 2850997 . + . ID=.5919;gene=hypA;locus_tag=b2726;gene_synonym=ECK2721;gene_synonym=JW2696;db_xref=EcoGene:EG10483 EMBL CDS 2850647 2850997 . + 0 ID=.5920;gene=hypA;locus_tag=b2726;gene_synonym=ECK2721;gene_synonym=JW2696;function=phenotype%3B Energy metabolism%2C carbon: Anaerobic respiration;note=pleiotrophic effects on 3 hydrogenase isozymes%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=protein involved in nickel insertion into hydrogenases 3;protein_id=AAC75768.1;db_xref=GI:1789081;db_xref=ASAP:ABE-0008958;db_xref=UniProtKB/Swiss-Prot:P0A700;db_xref=EcoGene:EG10483 EMBL gene 2851001 2851873 . + . ID=.5921;gene=hypB;locus_tag=b2727;gene_synonym=ECK2722;gene_synonym=hydB;gene_synonym=hydE;gene_synonym=JW2697;db_xref=EcoGene:EG10484 EMBL CDS 2851001 2851873 . + 0 ID=.5922;gene=hypB;locus_tag=b2727;gene_synonym=ECK2722;gene_synonym=hydB;gene_synonym=hydE;gene_synonym=JW2697;function=phenotype%3B Energy metabolism%2C carbon: Fermentation;experiment=N-terminus verified by Edman degradation: PMID 8423137%2C9740056;note=guanine-nucleotide binding protein%2C functions as nickel donor for large subunit of hydrogenase 3%3B GO_process: GO:0006113 - fermentation%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=GTP hydrolase involved in nickel liganding into hydrogenases;protein_id=AAC75769.1;db_xref=GI:1789082;db_xref=ASAP:ABE-0008960;db_xref=UniProtKB/Swiss-Prot:P0AAN3;db_xref=EcoGene:EG10484 EMBL gene 2851864 2852136 . + . ID=.5923;gene=hypC;locus_tag=b2728;gene_synonym=ECK2723;gene_synonym=JW2698;db_xref=EcoGene:EG10485 EMBL CDS 2851864 2852136 . + 0 ID=.5924;gene=hypC;locus_tag=b2728;gene_synonym=ECK2723;gene_synonym=JW2698;function=phenotype%3B Energy metabolism%2C carbon: Anaerobic respiration;note=pleiotrophic effects on 3 hydrogenase isozymes%3B GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=hydrogenase maturation protein;protein_id=AAC75770.1;db_xref=GI:1789083;db_xref=ASAP:ABE-0008962;db_xref=UniProtKB/Swiss-Prot:P0AAM3;db_xref=EcoGene:EG10485 EMBL gene 2852136 2853257 . + . ID=.5925;gene=hypD;locus_tag=b2729;gene_synonym=ECK2724;gene_synonym=hydF;gene_synonym=JW2699;db_xref=EcoGene:EG10486 EMBL CDS 2852136 2853257 . + 0 ID=.5926;gene=hypD;locus_tag=b2729;gene_synonym=ECK2724;gene_synonym=hydF;gene_synonym=JW2699;function=phenotype%3B Energy metabolism%2C carbon: Anaerobic respiration;note=pleiotrophic effects on 3 hydrogenase isozymes%3B GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=hydrogenase maturation protein;protein_id=AAC75771.1;db_xref=GI:1789084;db_xref=ASAP:ABE-0008965;db_xref=UniProtKB/Swiss-Prot:P24192;db_xref=EcoGene:EG10486 EMBL gene 2853254 2854264 . + . ID=.5927;gene=hypE;locus_tag=b2730;gene_synonym=ECK2725;gene_synonym=hydB;gene_synonym=JW2700;db_xref=EcoGene:EG10487 EMBL CDS 2853254 2854264 . + 0 ID=.5928;gene=hypE;locus_tag=b2730;gene_synonym=ECK2725;gene_synonym=hydB;gene_synonym=JW2700;function=factor%3B Energy metabolism%2C carbon: Anaerobic respiration;note=plays structural role in maturation of all 3 hydrogenases%3B GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=carbamoyl dehydratase%2C hydrogenases 1%2C2%2C3 maturation protein;protein_id=AAC75772.2;db_xref=GI:226510967;db_xref=ASAP:ABE-0008967;db_xref=UniProtKB/Swiss-Prot:P24193;db_xref=EcoGene:EG10487 EMBL gene 2854338 2856416 . + . ID=.5929;gene=fhlA;locus_tag=b2731;gene_synonym=ECK2726;gene_synonym=fhl;gene_synonym=JW2701;db_xref=EcoGene:EG10301 EMBL CDS 2854338 2856416 . + 0 ID=.5930;gene=fhlA;locus_tag=b2731;gene_synonym=ECK2726;gene_synonym=fhl;gene_synonym=JW2701;function=regulator%3B Energy metabolism%2C carbon: Fermentation;note=formate hydrogen-lyase transcriptional activator for fdhF%2C hyc and hyp operons%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0006113 - fermentation%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=formate hydrogenlyase transcriptional activator;protein_id=AAC75773.1;db_xref=GI:1789087;db_xref=ASAP:ABE-0008971;db_xref=UniProtKB/Swiss-Prot:P19323;db_xref=EcoGene:EG10301 EMBL repeat_region 2856426 2856449 . + . ID=.5931;note=REP198 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 2856453 2856806 . - . ID=.5932;gene=ygbA;locus_tag=b2732;gene_synonym=ECK2727;gene_synonym=JW2702;db_xref=EcoGene:EG11287 EMBL CDS 2856453 2856806 . - 0 ID=.5933;gene=ygbA;locus_tag=b2732;gene_synonym=ECK2727;gene_synonym=JW2702;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC75774.1;db_xref=GI:1789088;db_xref=ASAP:ABE-0008973;db_xref=UniProtKB/Swiss-Prot:P25728;db_xref=EcoGene:EG11287 EMBL gene 2857093 2859654 . + . ID=.5934;gene=mutS;locus_tag=b2733;gene_synonym=ant;gene_synonym=ECK2728;gene_synonym=fdv;gene_synonym=JW2703;gene_synonym=plm;db_xref=EcoGene:EG10625 EMBL CDS 2857093 2859654 . + 0 ID=.5935;gene=mutS;locus_tag=b2733;gene_synonym=ant;gene_synonym=ECK2728;gene_synonym=fdv;gene_synonym=JW2703;gene_synonym=plm;function=enzyme%3B DNA - replication%2C repair%2C restriction/modification;note=methyl-directed mismatch repair%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006281 - DNA repair;codon_start=1;transl_table=11;product=methyl-directed mismatch repair protein;protein_id=AAC75775.1;db_xref=GI:1789089;db_xref=ASAP:ABE-0008977;db_xref=UniProtKB/Swiss-Prot:P23909;db_xref=EcoGene:EG10625 EMBL gene 2859760 2860416 . + . ID=.5936;gene=pphB;locus_tag=b2734;gene_synonym=ECK2729;gene_synonym=JW2704;gene_synonym=prpB;gene_synonym=ygbH;db_xref=EcoGene:EG13102 EMBL CDS 2859760 2860416 . + 0 ID=.5937;gene=pphB;locus_tag=b2734;gene_synonym=ECK2729;gene_synonym=JW2704;gene_synonym=prpB;gene_synonym=ygbH;ec_number=3.1.3.16;function=enzyme%3B Not classified;note=protein phosphatase 2%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=serine/threonine-specific protein phosphatase 2;protein_id=AAC75776.1;db_xref=GI:1789090;db_xref=ASAP:ABE-0008980;db_xref=UniProtKB/Swiss-Prot:P55799;db_xref=EcoGene:EG13102 EMBL gene 2860467 2861234 . - . ID=.5938;gene=ygbI;locus_tag=b2735;gene_synonym=ECK2730;gene_synonym=JW2705;db_xref=EcoGene:EG13103 EMBL CDS 2860467 2861234 . - 0 ID=.5939;gene=ygbI;locus_tag=b2735;gene_synonym=ECK2730;gene_synonym=JW2705;function=putative regulator%3B Not classified;note=putative DEOR-type transcriptional regulator%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=DeoR family putative transcriptional regulator;protein_id=AAC75777.2;db_xref=GI:226510968;db_xref=ASAP:ABE-0008982;db_xref=UniProtKB/Swiss-Prot:P52598;db_xref=EcoGene:EG13103 EMBL gene 2861430 2862338 . + . ID=.5940;gene=ygbJ;locus_tag=b2736;gene_synonym=ECK2731;gene_synonym=JW2706;db_xref=EcoGene:EG13104 EMBL CDS 2861430 2862338 . + 0 ID=.5941;gene=ygbJ;locus_tag=b2736;gene_synonym=ECK2731;gene_synonym=JW2706;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=putative dehydrogenase;protein_id=AAC75778.1;db_xref=GI:1789092;db_xref=ASAP:ABE-0008986;db_xref=UniProtKB/Swiss-Prot:Q46888;db_xref=EcoGene:EG13104 EMBL gene 2862335 2863501 . + . ID=.5942;gene=ygbK;locus_tag=b2737;gene_synonym=ECK2732;gene_synonym=JW2707;db_xref=EcoGene:EG13105 EMBL CDS 2862335 2863501 . + 0 ID=.5943;gene=ygbK;locus_tag=b2737;gene_synonym=ECK2732;gene_synonym=JW2707;codon_start=1;transl_table=11;product=FliA-regulated DUF1537 family protein;protein_id=AAC75779.1;db_xref=GI:1789093;db_xref=ASAP:ABE-0008988;db_xref=UniProtKB/Swiss-Prot:Q46889;db_xref=EcoGene:EG13105 EMBL gene 2863593 2864231 . + . ID=.5944;gene=ygbL;locus_tag=b2738;gene_synonym=ECK2733;gene_synonym=JW2708;db_xref=EcoGene:EG13106 EMBL CDS 2863593 2864231 . + 0 ID=.5945;gene=ygbL;locus_tag=b2738;gene_synonym=ECK2733;gene_synonym=JW2708;function=putative enzyme%3B Not classified;note=putative epimerase/aldolase;codon_start=1;transl_table=11;product=putative class II aldolase;protein_id=AAC75780.1;db_xref=GI:1789094;db_xref=ASAP:ABE-0008994;db_xref=UniProtKB/Swiss-Prot:Q46890;db_xref=EcoGene:EG13106 EMBL gene 2864236 2865012 . + . ID=.5946;gene=ygbM;locus_tag=b2739;gene_synonym=ECK2734;gene_synonym=JW2709;db_xref=EcoGene:EG13107 EMBL CDS 2864236 2865012 . + 0 ID=.5947;gene=ygbM;locus_tag=b2739;gene_synonym=ECK2734;gene_synonym=JW2709;codon_start=1;transl_table=11;product=putative hydroxypyruvate isomerase;protein_id=AAC75781.1;db_xref=GI:1789095;db_xref=ASAP:ABE-0008996;db_xref=UniProtKB/Swiss-Prot:Q46891;db_xref=EcoGene:EG13107 EMBL gene 2865101 2866465 . + . ID=.5948;gene=ygbN;locus_tag=b2740;gene_synonym=ECK2735;gene_synonym=JW2710;db_xref=EcoGene:EG13108 EMBL CDS 2865101 2866465 . + 0 ID=.5949;gene=ygbN;locus_tag=b2740;gene_synonym=ECK2735;gene_synonym=JW2710;function=putative transport%3B Not classified;note=putative transport protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative transporter;protein_id=AAC75782.1;db_xref=GI:1789097;db_xref=ASAP:ABE-0008999;db_xref=UniProtKB/Swiss-Prot:Q46892;db_xref=EcoGene:EG13108 EMBL repeat_region 2866479 2866496 . + . ID=.5950;note=REP199 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 2866559 2867551 . - . ID=.5951;gene=rpoS;locus_tag=b2741;gene_synonym=abrD;gene_synonym=appR;gene_synonym=csi2;gene_synonym=dpeB;gene_synonym=ECK2736;gene_synonym=JW5437;gene_synonym=katF;gene_synonym=nur;gene_synonym=otsX;gene_synonym=sigS;db_xref=EcoGene:EG10510 EMBL CDS 2866559 2867551 . - 0 ID=.5952;gene=rpoS;locus_tag=b2741;gene_synonym=abrD;gene_synonym=appR;gene_synonym=csi2;gene_synonym=dpeB;gene_synonym=ECK2736;gene_synonym=JW5437;gene_synonym=katF;gene_synonym=nur;gene_synonym=otsX;gene_synonym=sigS;function=enzyme%3B Global regulatory functions;note=RNA polymerase%2C sigma S (sigma38) factor%3B synthesis of many growth phase related proteins%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006350 - transcription%3B GO_process: GO:0006970 - response to osmotic stress;codon_start=1;transl_table=11;product=RNA polymerase%2C sigma S (sigma 38) factor;protein_id=AAC75783.1;db_xref=GI:1789098;db_xref=ASAP:ABE-0009001;db_xref=UniProtKB/Swiss-Prot:P13445;db_xref=EcoGene:EG10510 EMBL gene 2867614 2868753 . - . ID=.5953;gene=nlpD;locus_tag=b2742;gene_synonym=ECK2737;gene_synonym=JW2712;db_xref=EcoGene:EG12111 EMBL CDS 2867614 2868753 . - 0 ID=.5954;gene=nlpD;locus_tag=b2742;gene_synonym=ECK2737;gene_synonym=JW2712;function=enzyme%3B Murein sacculus%2C peptidoglycan%3B membrane%3B Macromolecule synthesis%2C modification: Lipoprotein;note=lipoprotein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=activator of AmiC murein hydrolase activity%2C lipoprotein;protein_id=AAC75784.1;db_xref=GI:1789099;db_xref=ASAP:ABE-0009004;db_xref=UniProtKB/Swiss-Prot:P0ADA3;db_xref=EcoGene:EG12111 EMBL gene 2868893 2869519 . - . ID=.5955;gene=pcm;locus_tag=b2743;gene_synonym=ECK2738;gene_synonym=JW2713;db_xref=EcoGene:EG10689 EMBL CDS 2868893 2869519 . - 0 ID=.5956;gene=pcm;locus_tag=b2743;gene_synonym=ECK2738;gene_synonym=JW2713;ec_number=2.1.1.77;function=enzyme%3B Proteins - translation and modification;note=GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=L-isoaspartate protein carboxylmethyltransferase type II;protein_id=AAC75785.1;db_xref=GI:1789100;db_xref=ASAP:ABE-0009006;db_xref=UniProtKB/Swiss-Prot:P0A7A5;db_xref=EcoGene:EG10689 EMBL gene 2869513 2870274 . - . ID=.5957;gene=umpG;locus_tag=b2744;gene_synonym=ECK2739;gene_synonym=JW2714;gene_synonym=surE;gene_synonym=ygbC;db_xref=EcoGene:EG11817 EMBL CDS 2869513 2870274 . - 0 ID=.5958;gene=umpG;locus_tag=b2744;gene_synonym=ECK2739;gene_synonym=JW2714;gene_synonym=surE;gene_synonym=ygbC;function=phenotype%3B Not classified;note=survival protein%3B GO_process: GO:0006950 - response to stress;codon_start=1;transl_table=11;product=broad specificity 5'(3')-nucleotidase and polyphosphatase;protein_id=AAC75786.1;db_xref=GI:1789101;db_xref=ASAP:ABE-0009008;db_xref=UniProtKB/Swiss-Prot:P0A840;db_xref=EcoGene:EG11817 EMBL gene 2870255 2871304 . - . ID=.5959;gene=truD;locus_tag=b2745;gene_synonym=ECK2740;gene_synonym=JW2715;gene_synonym=ygbO;db_xref=EcoGene:EG13109 EMBL CDS 2870255 2871304 . - 0 ID=.5960;gene=truD;locus_tag=b2745;gene_synonym=ECK2740;gene_synonym=JW2715;gene_synonym=ygbO;ec_number=4.2.1.70;function=enzyme%3B tRNA modification;experiment=N-terminus verified by Edman degradation: PMID 12756329;note=putative hydrogenase subunit;codon_start=1;transl_table=11;product=tRNA(Glu) pseudouridine(13) synthase;protein_id=AAC75787.1;db_xref=GI:1789102;db_xref=ASAP:ABE-0009011;db_xref=UniProtKB/Swiss-Prot:Q57261;db_xref=EcoGene:EG13109 EMBL gene 2871301 2871780 . - . ID=.5961;gene=ispF;locus_tag=b2746;gene_synonym=ECK2741;gene_synonym=JW2716;gene_synonym=ygbB;db_xref=EcoGene:EG11816 EMBL CDS 2871301 2871780 . - 0 ID=.5962;gene=ispF;locus_tag=b2746;gene_synonym=ECK2741;gene_synonym=JW2716;gene_synonym=ygbB;ec_number=4.6.1.12;note=GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=2C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=AAC75788.1;db_xref=GI:1789103;db_xref=ASAP:ABE-0009013;db_xref=UniProtKB/Swiss-Prot:P62617;db_xref=EcoGene:EG11816 EMBL gene 2871780 2872490 . - . ID=.5963;gene=ispD;locus_tag=b2747;gene_synonym=ECK2742;gene_synonym=JW2717;gene_synonym=ygbP;db_xref=EcoGene:EG13110 EMBL CDS 2871780 2872490 . - 0 ID=.5964;gene=ispD;locus_tag=b2747;gene_synonym=ECK2742;gene_synonym=JW2717;gene_synonym=ygbP;ec_number=2.7.7.60;note=GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=4-diphosphocytidyl-2C-methyl-D-erythritol synthase;protein_id=AAC75789.1;db_xref=GI:1789104;db_xref=ASAP:ABE-0009017;db_xref=UniProtKB/Swiss-Prot:Q46893;db_xref=EcoGene:EG13110 EMBL gene 2872509 2872820 . - . ID=.5965;gene=ftsB;locus_tag=b2748;gene_synonym=ECK2743;gene_synonym=JW2718;gene_synonym=ygbQ;db_xref=EcoGene:EG13111 EMBL CDS 2872509 2872820 . - 0 ID=.5966;gene=ftsB;locus_tag=b2748;gene_synonym=ECK2743;gene_synonym=JW2718;gene_synonym=ygbQ;codon_start=1;transl_table=11;product=cell division protein;protein_id=AAC75790.1;db_xref=GI:1789105;db_xref=ASAP:ABE-0009019;db_xref=UniProtKB/Swiss-Prot:P0A6S5;db_xref=EcoGene:EG13111 EMBL gene 2873014 2873337 . - . ID=.5967;gene=ygbE;locus_tag=b2749;gene_synonym=ECK2744;gene_synonym=JW2719;db_xref=EcoGene:EG12707 EMBL CDS 2873014 2873337 . - 0 ID=.5968;gene=ygbE;locus_tag=b2749;gene_synonym=ECK2744;gene_synonym=JW2719;function=putative enzyme%3B Not classified;note=putative cytochrome oxidase subunit;codon_start=1;transl_table=11;product=DUF3561 family inner membrane protein;protein_id=AAC75791.1;db_xref=GI:1789106;db_xref=ASAP:ABE-0009021;db_xref=UniProtKB/Swiss-Prot:P46141;db_xref=EcoGene:EG12707 EMBL gene 2873387 2873992 . - . ID=.5969;gene=cysC;locus_tag=b2750;gene_synonym=ECK2745;gene_synonym=JW2720;db_xref=EcoGene:EG10185 EMBL CDS 2873387 2873992 . - 0 ID=.5970;gene=cysC;locus_tag=b2750;gene_synonym=ECK2745;gene_synonym=JW2720;ec_number=2.7.1.25;function=enzyme%3B Central intermediary metabolism: Sulfur metabolism;note=GO_process: GO:0006790 - sulfur metabolic process;codon_start=1;transl_table=11;product=adenosine 5'-phosphosulfate kinase;protein_id=AAC75792.1;db_xref=GI:1789107;db_xref=ASAP:ABE-0009023;db_xref=UniProtKB/Swiss-Prot:P0A6J1;db_xref=EcoGene:EG10185 EMBL gene 2873992 2875419 . - . ID=.5971;gene=cysN;locus_tag=b2751;gene_synonym=ECK2746;gene_synonym=JW2721;db_xref=EcoGene:EG10194 EMBL CDS 2873992 2875419 . - 0 ID=.5972;gene=cysN;locus_tag=b2751;gene_synonym=ECK2746;gene_synonym=JW2721;ec_number=2.7.7.4;function=enzyme%3B Central intermediary metabolism: Sulfur metabolism;experiment=N-terminus verified by Edman degradation: PMID 1316900;note=ATP-sulfurylase (ATP:sulfate adenylyltransferase)%2C subunit 1%2C probably a GTPase%3B GO_process: GO:0006790 - sulfur metabolic process;codon_start=1;transl_table=11;product=sulfate adenylyltransferase%2C subunit 1;protein_id=AAC75793.1;db_xref=GI:1789108;db_xref=ASAP:ABE-0009026;db_xref=UniProtKB/Swiss-Prot:P23845;db_xref=EcoGene:EG10194 EMBL gene 2875421 2876329 . - . ID=.5973;gene=cysD;locus_tag=b2752;gene_synonym=ECK2747;gene_synonym=JW2722;db_xref=EcoGene:EG10186 EMBL CDS 2875421 2876329 . - 0 ID=.5974;gene=cysD;locus_tag=b2752;gene_synonym=ECK2747;gene_synonym=JW2722;ec_number=2.7.7.4;function=enzyme%3B Central intermediary metabolism: Sulfur metabolism;experiment=N-terminus verified by Edman degradation: PMID 1316900;note=ATP:sulfurylase (ATP:sulfate adenylyltransferase)%2C subunit 2%3B GO_process: GO:0006790 - sulfur metabolic process;codon_start=1;transl_table=11;product=sulfate adenylyltransferase%2C subunit 2;protein_id=AAC75794.1;db_xref=GI:1789109;db_xref=ASAP:ABE-0009029;db_xref=UniProtKB/Swiss-Prot:P21156;db_xref=EcoGene:EG10186 EMBL gene 2876581 2877618 . + . ID=.5975;gene=iap;locus_tag=b2753;gene_synonym=ECK2748;gene_synonym=JW2723;db_xref=EcoGene:EG10488 EMBL CDS 2876581 2877618 . + 0 ID=.5976;gene=iap;locus_tag=b2753;gene_synonym=ECK2748;gene_synonym=JW2723;ec_number=3.4.11.-;function=enzyme%3B Proteins - translation and modification;note=GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=aminopeptidase in alkaline phosphatase isozyme conversion;protein_id=AAC75795.1;db_xref=GI:1789111;db_xref=ASAP:ABE-0009033;db_xref=UniProtKB/Swiss-Prot:P10423;db_xref=EcoGene:EG10488 EMBL gene 2878569 2878853 . - . ID=.5977;gene=ygbF;locus_tag=b2754;gene_synonym=cas2;gene_synonym=ECK2749;gene_synonym=JW5438;db_xref=EcoGene:EG12845 EMBL CDS 2878569 2878853 . - 0 ID=.5978;gene=ygbF;locus_tag=b2754;gene_synonym=cas2;gene_synonym=ECK2749;gene_synonym=JW5438;codon_start=1;transl_table=11;product=CRISPR adaptation ssRNA endonuclease;protein_id=AAC75796.2;db_xref=GI:87082153;db_xref=ASAP:ABE-0009036;db_xref=UniProtKB/Swiss-Prot:P45956;db_xref=EcoGene:EG12845 EMBL gene 2878855 2879772 . - . ID=.5979;gene=ygbT;locus_tag=b2755;gene_synonym=cas1;gene_synonym=ECK2750;gene_synonym=JW2725;db_xref=EcoGene:EG13114 EMBL CDS 2878855 2879772 . - 0 ID=.5980;gene=ygbT;locus_tag=b2755;gene_synonym=cas1;gene_synonym=ECK2750;gene_synonym=JW2725;codon_start=1;transl_table=11;product=multifunctional endonuclease Cas1%2C CRISPR adaptation protein%3B DNA repair enzyme;protein_id=AAC75797.1;db_xref=GI:1789113;db_xref=ASAP:ABE-0009038;db_xref=UniProtKB/Swiss-Prot:Q46896;db_xref=EcoGene:EG13114 EMBL gene 2879788 2880387 . - . ID=.5981;gene=casE;locus_tag=b2756;gene_synonym=cas6e;gene_synonym=cse3;gene_synonym=ECK2751;gene_synonym=JW2726;gene_synonym=ygcH;db_xref=EcoGene:EG13115 EMBL CDS 2879788 2880387 . - 0 ID=.5982;gene=casE;locus_tag=b2756;gene_synonym=cas6e;gene_synonym=cse3;gene_synonym=ECK2751;gene_synonym=JW2726;gene_synonym=ygcH;codon_start=1;transl_table=11;product=CRISPR RNA precursor cleavage enzyme%3B CRISP RNA (crRNA) containing Cascade antiviral complex protein;protein_id=AAC75798.1;db_xref=GI:1789114;db_xref=ASAP:ABE-0009042;db_xref=UniProtKB/Swiss-Prot:Q46897;db_xref=EcoGene:EG13115 EMBL gene 2880374 2881048 . - . ID=.5983;gene=casD;locus_tag=b2757;gene_synonym=cas5;gene_synonym=ECK2752;gene_synonym=JW5844;gene_synonym=ygcI;db_xref=EcoGene:EG13116 EMBL CDS 2880374 2881048 . - 0 ID=.5984;gene=casD;locus_tag=b2757;gene_synonym=cas5;gene_synonym=ECK2752;gene_synonym=JW5844;gene_synonym=ygcI;codon_start=1;transl_table=11;product=CRISP RNA (crRNA) containing Cascade antiviral complex protein;protein_id=AAC75799.2;db_xref=GI:87082154;db_xref=ASAP:ABE-0009044;db_xref=UniProtKB/Swiss-Prot:Q46898;db_xref=EcoGene:EG13116 EMBL gene 2881051 2882142 . - . ID=.5985;gene=casC;locus_tag=b2758;gene_synonym=cas4;gene_synonym=cas7;gene_synonym=cse4;gene_synonym=ECK2753;gene_synonym=JW2728;gene_synonym=ygcJ;db_xref=EcoGene:EG13117 EMBL CDS 2881051 2882142 . - 0 ID=.5986;gene=casC;locus_tag=b2758;gene_synonym=cas4;gene_synonym=cas7;gene_synonym=cse4;gene_synonym=ECK2753;gene_synonym=JW2728;gene_synonym=ygcJ;codon_start=1;transl_table=11;product=CRISP RNA (crRNA) containing Cascade antiviral complex protein;protein_id=AAC75800.1;db_xref=GI:1789116;db_xref=ASAP:ABE-0009046;db_xref=UniProtKB/Swiss-Prot:Q46899;db_xref=EcoGene:EG13117 EMBL gene 2882155 2882637 . - . ID=.5987;gene=casB;locus_tag=b2759;gene_synonym=cse2;gene_synonym=ECK2754;gene_synonym=JW2729;gene_synonym=ygcK;db_xref=EcoGene:EG13118 EMBL CDS 2882155 2882637 . - 0 ID=.5988;gene=casB;locus_tag=b2759;gene_synonym=cse2;gene_synonym=ECK2754;gene_synonym=JW2729;gene_synonym=ygcK;codon_start=1;transl_table=11;product=CRISP RNA (crRNA) containing Cascade antiviral complex protein;protein_id=AAC75801.1;db_xref=GI:1789117;db_xref=ASAP:ABE-0009048;db_xref=UniProtKB/Swiss-Prot:P76632;db_xref=EcoGene:EG13118 EMBL gene 2882630 2884138 . - . ID=.5989;gene=casA;locus_tag=b2760;gene_synonym=cse1;gene_synonym=ECK2755;gene_synonym=JW2730;gene_synonym=ygcL;db_xref=EcoGene:EG13119 EMBL CDS 2882630 2884138 . - 0 ID=.5990;gene=casA;locus_tag=b2760;gene_synonym=cse1;gene_synonym=ECK2755;gene_synonym=JW2730;gene_synonym=ygcL;codon_start=1;transl_table=11;product=CRISP RNA (crRNA) containing Cascade antiviral complex protein;protein_id=AAC75802.1;db_xref=GI:1789118;db_xref=ASAP:ABE-0009050;db_xref=UniProtKB/Swiss-Prot:Q46901;db_xref=EcoGene:EG13119 EMBL gene 2884553 2887219 . - . ID=.5991;gene=ygcB;locus_tag=b2761;gene_synonym=cas3;gene_synonym=ECK2756;gene_synonym=JW2731;db_xref=EcoGene:EG12634 EMBL CDS 2884553 2887219 . - 0 ID=.5992;gene=ygcB;locus_tag=b2761;gene_synonym=cas3;gene_synonym=ECK2756;gene_synonym=JW2731;codon_start=1;transl_table=11;product=Cascade complex anti-viral R-loop helicase-annealase Cas3;protein_id=AAC75803.1;db_xref=GI:1789119;db_xref=ASAP:ABE-0009054;db_xref=UniProtKB/Swiss-Prot:P38036;db_xref=EcoGene:EG12634 EMBL gene 2887354 2887409 . + . ID=.5993;gene=sokX;locus_tag=b4701;gene_synonym=ECK4514;db_xref=EcoGene:EG31187 EMBL ncRNA 2887354 2887409 . + . ID=.5994;ncrna_class=antisense_RNA;gene=sokX;locus_tag=b4701;gene_synonym=ECK4514;product=sok-related sRNA%2C function unknown;db_xref=EcoGene:EG31187 EMBL gene 2887578 2888312 . - . ID=.5995;gene=cysH;locus_tag=b2762;gene_synonym=ECK2757;gene_synonym=JW2732;db_xref=EcoGene:EG10189 EMBL CDS 2887578 2888312 . - 0 ID=.5996;gene=cysH;locus_tag=b2762;gene_synonym=ECK2757;gene_synonym=JW2732;ec_number=1.8.4.8;function=enzyme%3B Central intermediary metabolism: Sulfur metabolism;note=GO_process: GO:0006790 - sulfur metabolic process;codon_start=1;transl_table=11;product=phosphoadenosine phosphosulfate reductase%3B PAPS reductase%2C thioredoxin dependent;protein_id=AAC75804.1;db_xref=GI:1789121;db_xref=ASAP:ABE-0009057;db_xref=UniProtKB/Swiss-Prot:P17854;db_xref=EcoGene:EG10189 EMBL repeat_region 2888334 2888370 . + . ID=.5997;note=REP200 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 2888387 2890099 . - . ID=.5998;gene=cysI;locus_tag=b2763;gene_synonym=ECK2758;gene_synonym=JW2733;db_xref=EcoGene:EG10190 EMBL CDS 2888387 2890099 . - 0 ID=.5999;gene=cysI;locus_tag=b2763;gene_synonym=ECK2758;gene_synonym=JW2733;ec_number=1.8.1.2;function=enzyme%3B Central intermediary metabolism: Sulfur metabolism;note=sulfite reductase%2C alpha subunit%3B GO_process: GO:0006790 - sulfur metabolic process;codon_start=1;transl_table=11;product=sulfite reductase%2C beta subunit%2C NAD(P)-binding%2C heme-binding;protein_id=AAC75805.1;db_xref=GI:1789122;db_xref=ASAP:ABE-0009061;db_xref=UniProtKB/Swiss-Prot:P17846;db_xref=EcoGene:EG10190 EMBL gene 2890099 2891898 . - . ID=.6000;gene=cysJ;locus_tag=b2764;gene_synonym=ECK2759;gene_synonym=JW2734;db_xref=EcoGene:EG10191 EMBL CDS 2890099 2891898 . - 0 ID=.6001;gene=cysJ;locus_tag=b2764;gene_synonym=ECK2759;gene_synonym=JW2734;ec_number=1.5.1.30;ec_number=1.5.1.38;ec_number=1.8.1.2;function=enzyme%3B Central intermediary metabolism: Sulfur metabolism;note=sulfite reductase (NADPH)%2C flavoprotein beta subunit%3B GO_process: GO:0006790 - sulfur metabolic process;codon_start=1;transl_table=11;product=sulfite reductase%2C alpha subunit%2C flavoprotein;protein_id=AAC75806.1;db_xref=GI:1789123;db_xref=ASAP:ABE-0009063;db_xref=UniProtKB/Swiss-Prot:P38038;db_xref=EcoGene:EG10191 EMBL gene 2892214 2892579 . + . ID=.6002;gene=queD;locus_tag=b2765;gene_synonym=ECK2760;gene_synonym=JW2735;gene_synonym=sscR;gene_synonym=ygcM;db_xref=EcoGene:EG13120 EMBL CDS 2892214 2892579 . + 0 ID=.6003;gene=queD;locus_tag=b2765;gene_synonym=ECK2760;gene_synonym=JW2735;gene_synonym=sscR;gene_synonym=ygcM;function=putative enzyme%3B Not classified;note=putative 6-pyruvoyl tetrahydrobiopterin synthase;codon_start=1;transl_table=11;product=6-pyruvoyl tetrahydrobiopterin synthase (PTPS);protein_id=AAC75807.1;db_xref=GI:1789124;db_xref=ASAP:ABE-0009068;db_xref=UniProtKB/Swiss-Prot:P65870;db_xref=EcoGene:EG13120 EMBL gene 2892657 2893928 . + . ID=.6004;gene=ygcN;locus_tag=b2766;gene_synonym=ECK2761;gene_synonym=JW2736;db_xref=EcoGene:EG13121 EMBL CDS 2892657 2893928 . + 0 ID=.6005;gene=ygcN;locus_tag=b2766;gene_synonym=ECK2761;gene_synonym=JW2736;function=putative enzyme%3B Not classified;note=GO_function: GO:0009055 - electron carrier activity;codon_start=1;transl_table=11;product=putative oxidoreductase;protein_id=AAC75808.2;db_xref=GI:87082155;db_xref=ASAP:ABE-0009070;db_xref=UniProtKB/Swiss-Prot:Q46904;db_xref=EcoGene:EG13121 EMBL gene 2893919 2894179 . + . ID=.6006;gene=ygcO;locus_tag=b2767;gene_synonym=ECK2762;gene_synonym=JW2737;db_xref=EcoGene:EG13122 EMBL CDS 2893919 2894179 . + 0 ID=.6007;gene=ygcO;locus_tag=b2767;gene_synonym=ECK2762;gene_synonym=JW2737;note=GO_function: GO:0009055 - electron carrier activity;codon_start=1;transl_table=11;product=putative 4Fe-4S cluster-containing protein;protein_id=AAC75809.2;db_xref=GI:87082156;db_xref=ASAP:ABE-0009072;db_xref=UniProtKB/Swiss-Prot:Q46905;db_xref=EcoGene:EG13122 EMBL gene 2894196 2894771 . + . ID=.6008;gene=ygcP;locus_tag=b2768;gene_synonym=ECK2763;gene_synonym=JW2738;db_xref=EcoGene:EG13123 EMBL CDS 2894196 2894771 . + 0 ID=.6009;gene=ygcP;locus_tag=b2768;gene_synonym=ECK2763;gene_synonym=JW2738;function=putative regulator%3B Not classified;note=putative anti-terminator regulatory protein;codon_start=1;transl_table=11;product=putative antiterminator regulatory protein;protein_id=AAC75810.1;db_xref=GI:1789127;db_xref=ASAP:ABE-0009074;db_xref=UniProtKB/Swiss-Prot:Q46906;db_xref=EcoGene:EG13123 EMBL repeat_region 2894808 2894874 . + . ID=.6010;note=REP201 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 2894919 2895779 . - . ID=.6011;gene=ygcQ;locus_tag=b2769;gene_synonym=ECK2764;gene_synonym=JW5440;db_xref=EcoGene:EG13124 EMBL CDS 2894919 2895779 . - 0 ID=.6012;gene=ygcQ;locus_tag=b2769;gene_synonym=ECK2764;gene_synonym=JW5440;function=putative enzyme%3B Not classified;note=GO_function: GO:0009055 - electron carrier activity;codon_start=1;transl_table=11;product=putative flavoprotein;protein_id=AAC75811.2;db_xref=GI:87082157;db_xref=ASAP:ABE-0009077;db_xref=UniProtKB/Swiss-Prot:Q46907;db_xref=EcoGene:EG13124 EMBL gene 2895776 2896555 . - . ID=.6013;gene=ygcR;locus_tag=b2770;gene_synonym=ECK2765;gene_synonym=JW5441;db_xref=EcoGene:EG13125 EMBL CDS 2895776 2896555 . - 0 ID=.6014;gene=ygcR;locus_tag=b2770;gene_synonym=ECK2765;gene_synonym=JW5441;function=putative transport%3B Not classified;note=putative transport protein%3B GO_function: GO:0009055 - electron carrier activity;codon_start=1;transl_table=11;product=putative flavoprotein;protein_id=AAC75812.2;db_xref=GI:87082158;db_xref=ASAP:ABE-0009079;db_xref=UniProtKB/Swiss-Prot:Q46908;db_xref=EcoGene:EG13125 EMBL gene 2896533 2897870 . - . ID=.6015;gene=ygcS;locus_tag=b2771;gene_synonym=ECK2766;gene_synonym=JW5845;db_xref=EcoGene:EG13126 EMBL CDS 2896533 2897870 . - 0 ID=.6016;gene=ygcS;locus_tag=b2771;gene_synonym=ECK2766;gene_synonym=JW5845;function=putative transport%3B Not classified;note=putative transport protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative MFS sugar transporter%3B membrane protein;protein_id=AAC75813.2;db_xref=GI:87082159;db_xref=ASAP:ABE-0009082;db_xref=UniProtKB/Swiss-Prot:Q46909;db_xref=EcoGene:EG13126 EMBL gene 2897964 2899418 . - . ID=.6017;gene=ygcU;locus_tag=b4463;gene_synonym=ECK2767;gene_synonym=JW5442;gene_synonym=ygcT;gene_synonym=ygcV;db_xref=EcoGene:EG13128 EMBL CDS 2897964 2899418 . - 0 ID=.6018;gene=ygcU;locus_tag=b4463;gene_synonym=ECK2767;gene_synonym=JW5442;gene_synonym=ygcT;gene_synonym=ygcV;codon_start=1;transl_table=11;product=putative FAD-linked oxidoreductase;protein_id=AAT48151.1;db_xref=GI:48994907;db_xref=ASAP:ABE-0174094;db_xref=UniProtKB/Swiss-Prot:Q46911;db_xref=EcoGene:EG13128 EMBL gene 2899488 2900273 . - . ID=.6019;gene=ygcW;locus_tag=b2774;gene_synonym=ECK2768;gene_synonym=JW5443;db_xref=EcoGene:EG13130 EMBL CDS 2899488 2900273 . - 0 ID=.6020;gene=ygcW;locus_tag=b2774;gene_synonym=ECK2768;gene_synonym=JW5443;function=putative enzyme%3B Not classified;note=putative oxidoreductase;codon_start=1;transl_table=11;product=putative SDR family oxidoreductase;protein_id=AAC75816.2;db_xref=GI:87082160;db_xref=ASAP:ABE-0009088;db_xref=UniProtKB/Swiss-Prot:P76633;db_xref=EcoGene:EG13130 EMBL gene 2900592 2901869 . + . ID=.6021;gene=yqcE;locus_tag=b2775;gene_synonym=ECK2769;gene_synonym=JW2746;gene_synonym=yqcF;db_xref=EcoGene:EG13174 EMBL CDS 2900592 2901869 . + 0 ID=.6022;gene=yqcE;locus_tag=b2775;gene_synonym=ECK2769;gene_synonym=JW2746;gene_synonym=yqcF;function=putative transport%3B Not classified;note=putative transport protein;codon_start=1;transl_table=11;product=putative MFS transporter%2C inner membrane protein;protein_id=AAC75817.1;db_xref=GI:2367161;db_xref=ASAP:ABE-0009095;db_xref=UniProtKB/Swiss-Prot:P77031;db_xref=EcoGene:EG13174 EMBL gene 2901896 2903374 . + . ID=.6023;gene=ygcE;locus_tag=b2776;gene_synonym=ECK2770;gene_synonym=JW5444;db_xref=EcoGene:EG13033 EMBL CDS 2901896 2903374 . + 0 ID=.6024;gene=ygcE;locus_tag=b2776;gene_synonym=ECK2770;gene_synonym=JW5444;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=putative kinase;protein_id=AAC75818.1;db_xref=GI:1789138;db_xref=ASAP:ABE-0009097;db_xref=UniProtKB/Swiss-Prot:P55138;db_xref=EcoGene:EG13033 EMBL gene 2904747 2905418 . - . ID=.6025;gene=queE;locus_tag=b2777;gene_synonym=ECK2771;gene_synonym=JW2748;gene_synonym=ygcF;db_xref=EcoGene:EG13034 EMBL CDS 2904747 2905418 . - 0 ID=.6026;gene=queE;locus_tag=b2777;gene_synonym=ECK2771;gene_synonym=JW2748;gene_synonym=ygcF;function=enzyme%3B cofactor biosynthesis;note=GO_process: GO:0046138 - coenzyme and prosthetic group biosynthetic process;codon_start=1;transl_table=11;product=7-carboxy-7-deazaguanine synthase%3B queosine biosynthesis;protein_id=AAC75819.1;db_xref=GI:1789139;db_xref=ASAP:ABE-0009101;db_xref=UniProtKB/Swiss-Prot:P64554;db_xref=EcoGene:EG13034 EMBL gene 2905557 2905697 . + . ID=.6027;gene=yqcG;locus_tag=b4682;gene_synonym=ECK4497;db_xref=EcoGene:EG14487 EMBL CDS 2905557 2905697 . + 0 ID=.6028;gene=yqcG;locus_tag=b4682;gene_synonym=ECK4497;codon_start=1;transl_table=11;product=membrane stress resistance protein;protein_id=ACO60004.1;db_xref=GI:226510969;db_xref=UniProtKB/Swiss-Prot:C1P612;db_xref=EcoGene:EG14487 EMBL gene 2905711 2906583 . + . ID=.6029;gene=ygcG;locus_tag=b2778;gene_synonym=ECK2772;gene_synonym=JW5445;db_xref=EcoGene:EG13035 EMBL CDS 2905711 2906583 . + 0 ID=.6030;gene=ygcG;locus_tag=b2778;gene_synonym=ECK2772;gene_synonym=JW5445;codon_start=1;transl_table=11;product=TPM domain protein%2C putative phosphatase;protein_id=AAC75820.2;db_xref=GI:87082161;db_xref=ASAP:ABE-0009108;db_xref=UniProtKB/Swiss-Prot:P55140;db_xref=EcoGene:EG13035 EMBL gene 2906643 2907941 . - . ID=.6031;gene=eno;locus_tag=b2779;gene_synonym=ECK2773;gene_synonym=JW2750;db_xref=EcoGene:EG10258 EMBL CDS 2906643 2907941 . - 0 ID=.6032;gene=eno;locus_tag=b2779;gene_synonym=ECK2773;gene_synonym=JW2750;ec_number=4.2.1.11;function=enzyme%3B Energy metabolism%2C carbon: Glycolysis;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006096 - glycolysis%3B GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0006094 - gluconeogenesis;codon_start=1;transl_table=11;product=enolase;protein_id=AAC75821.1;db_xref=GI:1789141;db_xref=ASAP:ABE-0009110;db_xref=UniProtKB/Swiss-Prot:P0A6P9;db_xref=EcoGene:EG10258 EMBL gene 2908029 2909666 . - . ID=.6033;gene=pyrG;locus_tag=b2780;gene_synonym=ECK2774;gene_synonym=JW2751;db_xref=EcoGene:EG10810 EMBL CDS 2908029 2909666 . - 0 ID=.6034;gene=pyrG;locus_tag=b2780;gene_synonym=ECK2774;gene_synonym=JW2751;ec_number=6.3.4.2;function=enzyme%3B Central intermediary metabolism: Nucleotide interconversions;note=GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion;codon_start=1;transl_table=11;product=CTP synthetase;protein_id=AAC75822.1;db_xref=GI:1789142;db_xref=ASAP:ABE-0009112;db_xref=UniProtKB/Swiss-Prot:P0A7E5;db_xref=EcoGene:EG10810 EMBL gene 2909894 2910685 . - . ID=.6035;gene=mazG;locus_tag=b2781;gene_synonym=ECK2775;gene_synonym=JW2752;db_xref=EcoGene:EG10572 EMBL CDS 2909894 2910685 . - 0 ID=.6036;gene=mazG;locus_tag=b2781;gene_synonym=ECK2775;gene_synonym=JW2752;codon_start=1;transl_table=11;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=AAC75823.1;db_xref=GI:1789144;db_xref=ASAP:ABE-0009117;db_xref=UniProtKB/Swiss-Prot:P0AEY3;db_xref=EcoGene:EG10572 EMBL gene 2910756 2911091 . - . ID=.6037;gene=mazF;locus_tag=b2782;gene_synonym=chpA;gene_synonym=chpAK;gene_synonym=ECK2776;gene_synonym=JW2753;db_xref=EcoGene:EG11249 EMBL CDS 2910756 2911091 . - 0 ID=.6038;gene=mazF;locus_tag=b2782;gene_synonym=chpA;gene_synonym=chpAK;gene_synonym=ECK2776;gene_synonym=JW2753;function=putative factor%3B Not classified;note=probable growth inhibitor%2C PemK-like%2C autoregulated;codon_start=1;transl_table=11;product=mRNA interferase toxin%2C antitoxin is MazE;protein_id=AAC75824.1;db_xref=GI:1789145;db_xref=ASAP:ABE-0009119;db_xref=UniProtKB/Swiss-Prot:P0AE70;db_xref=EcoGene:EG11249 EMBL gene 2911091 2911339 . - . ID=.6039;gene=mazE;locus_tag=b2783;gene_synonym=chpAI;gene_synonym=chpR;gene_synonym=ECK2777;gene_synonym=JW2754;gene_synonym=tasA;db_xref=EcoGene:EG10571 EMBL CDS 2911091 2911339 . - 0 ID=.6040;gene=mazE;locus_tag=b2783;gene_synonym=chpAI;gene_synonym=chpR;gene_synonym=ECK2777;gene_synonym=JW2754;gene_synonym=tasA;function=phenotype%3B Not classified;note=suppressor of inhibitory function of ChpA%2C PemI-like%2C autoregulated;codon_start=1;transl_table=11;product=antitoxin of the ChpA-ChpR toxin-antitoxin system;protein_id=AAC75825.1;db_xref=GI:1789146;db_xref=ASAP:ABE-0009122;db_xref=UniProtKB/Swiss-Prot:P0AE72;db_xref=EcoGene:EG10571 EMBL gene 2911417 2913651 . - . ID=.6041;gene=relA;locus_tag=b2784;gene_synonym=ECK2778;gene_synonym=JW2755;gene_synonym=RC;db_xref=EcoGene:EG10835 EMBL CDS 2911417 2913651 . - 0 ID=.6042;gene=relA;locus_tag=b2784;gene_synonym=ECK2778;gene_synonym=JW2755;gene_synonym=RC;ec_number=2.7.6.5;function=enzyme%3B Global regulatory functions;note=(p)ppGpp synthetase I (GTP pyrophosphokinase)%3B regulation of RNA synthesis%3B stringent factor%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion;codon_start=1;transl_table=11;product=(p)ppGpp synthetase I/GTP pyrophosphokinase;protein_id=AAC75826.1;db_xref=GI:1789147;db_xref=ASAP:ABE-0009125;db_xref=UniProtKB/Swiss-Prot:P0AG20;db_xref=EcoGene:EG10835 EMBL gene 2913699 2915000 . - . ID=.6043;gene=rlmD;locus_tag=b2785;gene_synonym=ECK2779;gene_synonym=JW2756;gene_synonym=rumA;gene_synonym=ygcA;db_xref=EcoGene:EG11247 EMBL CDS 2913699 2915000 . - 0 ID=.6044;gene=rlmD;locus_tag=b2785;gene_synonym=ECK2779;gene_synonym=JW2756;gene_synonym=rumA;gene_synonym=ygcA;ec_number=2.1.1.-;function=enzyme%3B rRNA modification;note=GO_process: GO:0009451 - RNA modification;codon_start=1;transl_table=11;product=23S rRNA m(5)U1939 methyltransferase%2C SAM-dependent;protein_id=AAC75827.1;db_xref=GI:1789148;db_xref=ASAP:ABE-0009127;db_xref=UniProtKB/Swiss-Prot:P55135;db_xref=EcoGene:EG11247 EMBL gene 2915057 2917813 . + . ID=.6045;gene=barA;locus_tag=b2786;gene_synonym=airS;gene_synonym=ECK2780;gene_synonym=gacC;gene_synonym=JW2757;db_xref=EcoGene:EG11367 EMBL CDS 2915057 2917813 . + 0 ID=.6046;gene=barA;locus_tag=b2786;gene_synonym=airS;gene_synonym=ECK2780;gene_synonym=gacC;gene_synonym=JW2757;function=enzyme%3B Global regulatory functions;note=sensor-regulator%2C activates OmpR by phophorylation%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=hybrid sensory histidine kinase%2C in two-component regulatory system with UvrY;protein_id=AAC75828.1;db_xref=GI:1789149;db_xref=ASAP:ABE-0009131;db_xref=UniProtKB/Swiss-Prot:P0AEC5;db_xref=EcoGene:EG11367 EMBL repeat_region 2917888 2917982 . + . ID=.6047;note=RIP202 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 2918045 2919385 . - . ID=.6048;gene=gudD;locus_tag=b2787;gene_synonym=ECK2781;gene_synonym=JW2758;gene_synonym=ygcX;db_xref=EcoGene:EG13167 EMBL CDS 2918045 2919385 . - 0 ID=.6049;gene=gudD;locus_tag=b2787;gene_synonym=ECK2781;gene_synonym=JW2758;gene_synonym=ygcX;ec_number=4.2.1.40;note=(D)-glucarate dehydratase 1%3B (L)-idarate dehydratase%3B (L)-idarate epimerase%3B (D)-glucarate epimerase%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=D-glucarate dehydratase 1;protein_id=AAC75829.1;db_xref=GI:1789150;db_xref=ASAP:ABE-0009134;db_xref=UniProtKB/Swiss-Prot:P0AES2;db_xref=EcoGene:EG13167 EMBL gene 2919406 2920746 . - . ID=.6050;gene=gudX;locus_tag=b2788;gene_synonym=ECK2782;gene_synonym=JW2759;gene_synonym=ygcY;db_xref=EcoGene:EG13168 EMBL CDS 2919406 2920746 . - 0 ID=.6051;gene=gudX;locus_tag=b2788;gene_synonym=ECK2782;gene_synonym=JW2759;gene_synonym=ygcY;function=putative enzyme%3B Not classified;note=putative (D)-glucarate dehydratase 2%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=glucarate dehydratase-related protein%2C substrate unknown;protein_id=AAC75830.1;db_xref=GI:1789151;db_xref=ASAP:ABE-0009136;db_xref=UniProtKB/Swiss-Prot:Q46915;db_xref=EcoGene:EG13168 EMBL gene 2920748 2922100 . - . ID=.6052;gene=gudP;locus_tag=b2789;gene_synonym=ECK2783;gene_synonym=JW2760;gene_synonym=ygcZ;db_xref=EcoGene:EG13169 EMBL CDS 2920748 2922100 . - 0 ID=.6053;gene=gudP;locus_tag=b2789;gene_synonym=ECK2783;gene_synonym=JW2760;gene_synonym=ygcZ;note=putative D-glucarate permease (MFS family)%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=putative D-glucarate transporter;protein_id=AAC75831.1;db_xref=GI:1789152;db_xref=ASAP:ABE-0009139;db_xref=UniProtKB/Swiss-Prot:Q46916;db_xref=EcoGene:EG13169 EMBL gene 2922535 2922984 . - . ID=.6054;gene=yqcA;locus_tag=b2790;gene_synonym=ECK2784;gene_synonym=JW2761;db_xref=EcoGene:EG13170 EMBL CDS 2922535 2922984 . - 0 ID=.6055;gene=yqcA;locus_tag=b2790;gene_synonym=ECK2784;gene_synonym=JW2761;codon_start=1;transl_table=11;product=short-chain flavodoxin%2C FMN-binding;protein_id=AAC75832.1;db_xref=GI:1789154;db_xref=ASAP:ABE-0009142;db_xref=UniProtKB/Swiss-Prot:P65367;db_xref=EcoGene:EG13170 EMBL gene 2923002 2923784 . - . ID=.6056;gene=truC;locus_tag=b2791;gene_synonym=ECK2785;gene_synonym=JW2762;gene_synonym=yqcB;db_xref=EcoGene:EG13171 EMBL CDS 2923002 2923784 . - 0 ID=.6057;gene=truC;locus_tag=b2791;gene_synonym=ECK2785;gene_synonym=JW2762;gene_synonym=yqcB;ec_number=4.2.1.70;function=enzyme%3B tRNA modification;codon_start=1;transl_table=11;product=tRNA(Ile1%2CAsp) pseudouridine(65) synthase;protein_id=AAC75833.1;db_xref=GI:1789155;db_xref=ASAP:ABE-0009147;db_xref=UniProtKB/Swiss-Prot:P0AA41;db_xref=EcoGene:EG13171 EMBL gene 2923784 2924113 . - . ID=.6058;gene=yqcC;locus_tag=b2792;gene_synonym=ECK2786;gene_synonym=JW2763;db_xref=EcoGene:EG13172 EMBL CDS 2923784 2924113 . - 0 ID=.6059;gene=yqcC;locus_tag=b2792;gene_synonym=ECK2786;gene_synonym=JW2763;codon_start=1;transl_table=11;product=DUF446 family protein;protein_id=AAC75834.1;db_xref=GI:1789156;db_xref=ASAP:ABE-0009152;db_xref=UniProtKB/Swiss-Prot:Q46919;db_xref=EcoGene:EG13172 EMBL gene 2924156 2924524 . - . ID=.6060;gene=csrB;locus_tag=b4408;gene_synonym=ECK2787;gene_synonym=JWR0062;db_xref=EcoGene:EG31119 EMBL ncRNA 2924156 2924524 . - . ID=.6061;ncrna_class=other;gene=csrB;locus_tag=b4408;gene_synonym=ECK2787;gene_synonym=JWR0062;product=CsrA-binding sRNA%2C antagonizing CsrA regulation;note=CsrB regulatory RNA%3B binds global regulatory protein CsrA%2C antagonizing CsrA regulation%2C blocking the CsrA binding of glgC mRNA;db_xref=ASAP:ABE-0047213;db_xref=EcoGene:EG31119 EMBL gene 2924735 2925280 . - . ID=.6062;gene=syd;locus_tag=b2793;gene_synonym=ECK2788;gene_synonym=JW2764;gene_synonym=ydr;db_xref=EcoGene:EG12959 EMBL CDS 2924735 2925280 . - 0 ID=.6063;gene=syd;locus_tag=b2793;gene_synonym=ECK2788;gene_synonym=JW2764;gene_synonym=ydr;experiment=N-terminus verified by Edman degradation: PMID 7890670;note=interacts with secY%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=SecY-interacting protein;protein_id=AAC75835.1;db_xref=GI:1789157;db_xref=ASAP:ABE-0009154;db_xref=UniProtKB/Swiss-Prot:P0A8U0;db_xref=EcoGene:EG12959 EMBL gene 2925348 2926196 . + . ID=.6064;gene=queF;locus_tag=b2794;gene_synonym=ECK2789;gene_synonym=JW2765;gene_synonym=yqcD;db_xref=EcoGene:EG13173 EMBL CDS 2925348 2926196 . + 0 ID=.6065;gene=queF;locus_tag=b2794;gene_synonym=ECK2789;gene_synonym=JW2765;gene_synonym=yqcD;ec_number=1.7.1.-;function=enzyme%3B Queuosine biosynthesis;codon_start=1;transl_table=11;product=7-cyano-7-deazaguanine reductase (NADPH-dependent);protein_id=AAC75836.1;db_xref=GI:1789158;db_xref=ASAP:ABE-0009162;db_xref=UniProtKB/Swiss-Prot:Q46920;db_xref=EcoGene:EG13173 EMBL gene 2926308 2927672 . + . ID=.6066;gene=ygdH;locus_tag=b2795;gene_synonym=ECK2790;gene_synonym=JW2766;db_xref=EcoGene:EG12373 EMBL CDS 2926308 2927672 . + 0 ID=.6067;gene=ygdH;locus_tag=b2795;gene_synonym=ECK2790;gene_synonym=JW2766;codon_start=1;transl_table=11;product=UPF0717 family protein;protein_id=AAC75837.1;db_xref=GI:1789159;db_xref=ASAP:ABE-0009166;db_xref=UniProtKB/Swiss-Prot:P0ADR8;db_xref=EcoGene:EG12373 EMBL gene 2928229 2929518 . + . ID=.6068;gene=sdaC;locus_tag=b2796;gene_synonym=dcrA;gene_synonym=ECK2791;gene_synonym=JW2767;db_xref=EcoGene:EG12142 EMBL CDS 2928229 2929518 . + 0 ID=.6069;gene=sdaC;locus_tag=b2796;gene_synonym=dcrA;gene_synonym=ECK2791;gene_synonym=JW2767;function=putative transport%3B Transport of small molecules: Amino acids%2C amines;note=probable serine transporter%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006564 - L-serine biosynthetic process;codon_start=1;transl_table=11;product=putative serine transporter;protein_id=AAC75838.1;db_xref=GI:1789160;db_xref=ASAP:ABE-0009169;db_xref=UniProtKB/Swiss-Prot:P0AAD6;db_xref=EcoGene:EG12142 EMBL gene 2929576 2930943 . + . ID=.6070;gene=sdaB;locus_tag=b2797;gene_synonym=ECK2792;gene_synonym=JW2768;db_xref=EcoGene:EG11623 EMBL CDS 2929576 2930943 . + 0 ID=.6071;gene=sdaB;locus_tag=b2797;gene_synonym=ECK2792;gene_synonym=JW2768;ec_number=4.3.1.17;function=enzyme%3B Degradation of small molecules: Amino acids;note=L-serine dehydratase (deaminase)%2C L-SD2%3B GO_process: GO:0019395 - fatty acid oxidation%3B GO_process: GO:0009063 - cellular amino acid catabolic process;codon_start=1;transl_table=11;product=L-serine dehydratase 2;protein_id=AAC75839.1;db_xref=GI:1789161;db_xref=ASAP:ABE-0009172;db_xref=UniProtKB/Swiss-Prot:P30744;db_xref=EcoGene:EG11623 EMBL gene 2931055 2931810 . + . ID=.6072;gene=ygdG;locus_tag=b2798;gene_synonym=ECK2793;gene_synonym=exo;gene_synonym=JW5446;gene_synonym=xni;db_xref=EcoGene:EG12372 EMBL CDS 2931055 2931810 . + 0 ID=.6073;gene=ygdG;locus_tag=b2798;gene_synonym=ECK2793;gene_synonym=exo;gene_synonym=JW5446;gene_synonym=xni;ec_number=3.1.11.-;note=5'-3' exonuclease%3B GO_process: GO:0006308 - DNA catabolic process;codon_start=1;transl_table=11;product=Ssb-binding protein%2C misidentified as ExoIX;protein_id=AAC75840.2;db_xref=GI:226510970;db_xref=ASAP:ABE-0009174;db_xref=UniProtKB/Swiss-Prot:P38506;db_xref=EcoGene:EG12372 EMBL repeat_region 2931817 2931846 . + . ID=.6074;note=REP203 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 2931865 2933013 . - . ID=.6075;gene=fucO;locus_tag=b2799;gene_synonym=ECK2794;gene_synonym=JW2770;db_xref=EcoGene:EG10351 EMBL CDS 2931865 2933013 . - 0 ID=.6076;gene=fucO;locus_tag=b2799;gene_synonym=ECK2794;gene_synonym=JW2770;ec_number=1.1.1.77;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0009441 - glycolate metabolic process;codon_start=1;transl_table=11;product=L-1%2C2-propanediol oxidoreductase;protein_id=AAC75841.2;db_xref=GI:345297178;db_xref=ASAP:ABE-0009177;db_xref=UniProtKB/Swiss-Prot:P0A9S1;db_xref=EcoGene:EG10351 EMBL gene 2933041 2933688 . - . ID=.6077;gene=fucA;locus_tag=b2800;gene_synonym=ECK2795;gene_synonym=fucC;gene_synonym=JW2771;gene_synonym=prd;db_xref=EcoGene:EG10348 EMBL CDS 2933041 2933688 . - 0 ID=.6078;gene=fucA;locus_tag=b2800;gene_synonym=ECK2795;gene_synonym=fucC;gene_synonym=JW2771;gene_synonym=prd;ec_number=4.1.2.17;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=L-fuculose-1-phosphate aldolase;protein_id=AAC75842.1;db_xref=GI:1789164;db_xref=ASAP:ABE-0009179;db_xref=UniProtKB/Swiss-Prot:P0AB87;db_xref=EcoGene:EG10348 EMBL gene 2934235 2935551 . + . ID=.6079;gene=fucP;locus_tag=b2801;gene_synonym=ECK2796;gene_synonym=JW2772;db_xref=EcoGene:EG10352 EMBL CDS 2934235 2935551 . + 0 ID=.6080;gene=fucP;locus_tag=b2801;gene_synonym=ECK2796;gene_synonym=JW2772;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=fucose permease%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=L-fucose transporter;protein_id=AAC75843.1;db_xref=GI:1789166;db_xref=ASAP:ABE-0009187;db_xref=UniProtKB/Swiss-Prot:P11551;db_xref=EcoGene:EG10352 EMBL gene 2935584 2937359 . + . ID=.6081;gene=fucI;locus_tag=b2802;gene_synonym=ECK2797;gene_synonym=JW2773;db_xref=EcoGene:EG10349 EMBL CDS 2935584 2937359 . + 0 ID=.6082;gene=fucI;locus_tag=b2802;gene_synonym=ECK2797;gene_synonym=JW2773;ec_number=5.3.1.25;function=enzyme%3B Degradation of small molecules: Carbon compounds;experiment=N-terminus verified by Edman degradation: PMID 8052131;note=GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=L-fucose isomerase;protein_id=AAC75844.1;db_xref=GI:1789167;db_xref=ASAP:ABE-0009189;db_xref=UniProtKB/Swiss-Prot:P69922;db_xref=EcoGene:EG10349 EMBL repeat_region 2937426 2937449 . + . ID=.6083;note=REP204 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 2937468 2938886 . + . ID=.6084;gene=fucK;locus_tag=b2803;gene_synonym=ECK2798;gene_synonym=JW2774;db_xref=EcoGene:EG10350 EMBL CDS 2937468 2938886 . + 0 ID=.6085;gene=fucK;locus_tag=b2803;gene_synonym=ECK2798;gene_synonym=JW2774;ec_number=2.7.1.51;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=L-fuculokinase;protein_id=AAC75845.2;db_xref=GI:669802029;db_xref=ASAP:ABE-0009191;db_xref=UniProtKB/Swiss-Prot:P11553;db_xref=EcoGene:EG10350 EMBL gene 2938888 2939310 . + . ID=.6086;gene=fucU;locus_tag=b2804;gene_synonym=ECK2799;gene_synonym=JW2775;db_xref=EcoGene:EG10355 EMBL CDS 2938888 2939310 . + 0 ID=.6087;gene=fucU;locus_tag=b2804;gene_synonym=ECK2799;gene_synonym=JW2775;function=phenotype%3B Degradation of small molecules: Carbon compounds;note=protein of fucose operon;codon_start=1;transl_table=11;product=L-fucose mutarotase;protein_id=AAC75846.1;db_xref=GI:1789169;db_xref=ASAP:ABE-0009193;db_xref=UniProtKB/Swiss-Prot:P0AEN8;db_xref=EcoGene:EG10355 EMBL gene 2939368 2940099 . + . ID=.6088;gene=fucR;locus_tag=b2805;gene_synonym=ECK2800;gene_synonym=JW2776;db_xref=EcoGene:EG10353 EMBL CDS 2939368 2940099 . + 0 ID=.6089;gene=fucR;locus_tag=b2805;gene_synonym=ECK2800;gene_synonym=JW2776;function=regulator%3B Degradation of small molecules: Carbon compounds;note=positive regulator of the fuc operon%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=l-fucose operon activator;protein_id=AAC75847.1;db_xref=GI:1789170;db_xref=ASAP:ABE-0009195;db_xref=UniProtKB/Swiss-Prot:P0ACK8;db_xref=EcoGene:EG10353 EMBL gene 2940143 2941243 . - . ID=.6090;gene=rlmM;locus_tag=b2806;gene_synonym=ECK2801;gene_synonym=JW2777;gene_synonym=ygdE;db_xref=EcoGene:EG11794 EMBL CDS 2940143 2941243 . - 0 ID=.6091;gene=rlmM;locus_tag=b2806;gene_synonym=ECK2801;gene_synonym=JW2777;gene_synonym=ygdE;function=enzyme%3B rRNA modification;codon_start=1;transl_table=11;product=23S rRNA C2498 2'-O-ribose methyltransferase%2C SAM-dependent;protein_id=AAC75848.1;db_xref=GI:1789171;db_xref=ASAP:ABE-0009197;db_xref=UniProtKB/Swiss-Prot:P0ADR6;db_xref=EcoGene:EG11794 EMBL gene 2941236 2941631 . - . ID=.6092;gene=ygdD;locus_tag=b2807;gene_synonym=ECK2802;gene_synonym=JW2778;db_xref=EcoGene:EG11793 EMBL CDS 2941236 2941631 . - 0 ID=.6093;gene=ygdD;locus_tag=b2807;gene_synonym=ECK2802;gene_synonym=JW2778;codon_start=1;transl_table=11;product=UPF0382 family inner membrane protein;protein_id=AAC75849.1;db_xref=GI:1789172;db_xref=ASAP:ABE-0009199;db_xref=UniProtKB/Swiss-Prot:P0ADR2;db_xref=EcoGene:EG11793 EMBL gene 2941650 2942567 . - . ID=.6094;gene=gcvA;locus_tag=b2808;gene_synonym=ECK2803;gene_synonym=JW2779;db_xref=EcoGene:EG11795 EMBL CDS 2941650 2942567 . - 0 ID=.6095;gene=gcvA;locus_tag=b2808;gene_synonym=ECK2803;gene_synonym=JW2779;function=regulator%3B Central intermediary metabolism: Pool%2C multipurpose conversions;note=positive regulator of gcv operon%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0009063 - cellular amino acid catabolic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=glycine cleavage system transcriptional activator%3B autorepressor;protein_id=AAC75850.1;db_xref=GI:1789173;db_xref=ASAP:ABE-0009202;db_xref=UniProtKB/Swiss-Prot:P0A9F6;db_xref=EcoGene:EG11795 EMBL gene 2942696 2942901 . + . ID=.6096;gene=gcvB;locus_tag=b4443;gene_synonym=ECK2804;gene_synonym=IS145;gene_synonym=JWR0247;gene_synonym=psrA11;db_xref=EcoGene:EG31129 EMBL ncRNA 2942696 2942901 . + . ID=.6097;ncrna_class=antisense_RNA;gene=gcvB;locus_tag=b4443;gene_synonym=ECK2804;gene_synonym=IS145;gene_synonym=JWR0247;gene_synonym=psrA11;product=sRNA antisense regulator represses oppA%2C dppA%2C gltI and livJ expression%2C Hfq-dependent;note=regulated by gcvA and gcvR;function=represses oppA%2C dppA%2C gltI%2C and livJ expression%3B mechanism unknown;db_xref=ASAP:ABE-0047263;db_xref=EcoGene:EG31129 EMBL gene 2942918 2943145 . - . ID=.6098;gene=ygdI;locus_tag=b2809;gene_synonym=ECK2805;gene_synonym=JW5448;db_xref=EcoGene:EG13081 EMBL CDS 2942918 2943145 . - 0 ID=.6099;gene=ygdI;locus_tag=b2809;gene_synonym=ECK2805;gene_synonym=JW5448;codon_start=1;transl_table=11;product=DUF903 family verified lipoprotein;protein_id=AAC75851.2;db_xref=GI:87082162;db_xref=ASAP:ABE-0009214;db_xref=UniProtKB/Swiss-Prot:P65292;db_xref=EcoGene:EG13081 EMBL gene 2943337 2944542 . + . ID=.6100;gene=csdA;locus_tag=b2810;gene_synonym=ECK2806;gene_synonym=JW2781;gene_synonym=ygdJ;db_xref=EcoGene:EG13082 EMBL CDS 2943337 2944542 . + 0 ID=.6101;gene=csdA;locus_tag=b2810;gene_synonym=ECK2806;gene_synonym=JW2781;gene_synonym=ygdJ;ec_number=4.4.1.-;experiment=N-terminus verified by Edman degradation: PMID 9278392;note=GO_process: GO:0006790 - sulfur metabolic process%3B GO_process: GO:0006520 - cellular amino acid metabolic process;codon_start=1;transl_table=11;product=cysteine sulfinate desulfinase;protein_id=AAC75852.1;db_xref=GI:1789175;db_xref=ASAP:ABE-0009218;db_xref=UniProtKB/Swiss-Prot:Q46925;db_xref=EcoGene:EG13082 EMBL gene 2944542 2944985 . + . ID=.6102;gene=csdE;locus_tag=b2811;gene_synonym=ECK2807;gene_synonym=JW2782;gene_synonym=ygdK;db_xref=EcoGene:EG13083 EMBL CDS 2944542 2944985 . + 0 ID=.6103;gene=csdE;locus_tag=b2811;gene_synonym=ECK2807;gene_synonym=JW2782;gene_synonym=ygdK;codon_start=1;transl_table=11;product=CsdA-binding activator%3B Fe-S protein;protein_id=AAC75853.1;db_xref=GI:1789176;db_xref=ASAP:ABE-0009220;db_xref=UniProtKB/Swiss-Prot:P0AGF2;db_xref=EcoGene:EG13083 EMBL repeat_region 2944994 2945027 . + . ID=.6104;note=REP205 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 2945036 2945842 . - . ID=.6105;gene=tcdA;locus_tag=b2812;gene_synonym=csdL;gene_synonym=ECK2808;gene_synonym=JW2783;gene_synonym=ygdL;db_xref=EcoGene:EG13084 EMBL CDS 2945036 2945842 . - 0 ID=.6106;gene=tcdA;locus_tag=b2812;gene_synonym=csdL;gene_synonym=ECK2808;gene_synonym=JW2783;gene_synonym=ygdL;function=putative enzyme%3B Not classified;note=putative enzyme;codon_start=1;transl_table=11;product=tRNA threonylcarbamoyladenosine dehydratase%3B sulfur acceptor for CsdA;protein_id=AAC75854.1;db_xref=GI:1789177;db_xref=ASAP:ABE-0009223;db_xref=UniProtKB/Swiss-Prot:Q46927;db_xref=EcoGene:EG13084 EMBL repeat_region 2945896 2945992 . + . ID=.6107;note=RIP206 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 2946081 2947178 . - . ID=.6108;gene=mltA;locus_tag=b2813;gene_synonym=ECK2809;gene_synonym=JW2784;gene_synonym=mlt;gene_synonym=ygdM;db_xref=EcoGene:EG13085 EMBL CDS 2946081 2947178 . - 0 ID=.6109;gene=mltA;locus_tag=b2813;gene_synonym=ECK2809;gene_synonym=JW2784;gene_synonym=mlt;gene_synonym=ygdM;ec_number=3.2.1.-;function=enzyme%3B Murein sacculus%2C peptidoglycan;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane%3B GO_process: GO:0009252 - peptidoglycan biosynthetic process;codon_start=1;transl_table=11;product=membrane-bound lytic murein transglycosylase A;protein_id=AAC75855.1;db_xref=GI:1789179;db_xref=ASAP:ABE-0009228;db_xref=UniProtKB/Swiss-Prot:P0A935;db_xref=EcoGene:EG13085 EMBL gene 2947387 2947463 . + . ID=.6110;gene=metZ;locus_tag=b2814;gene_synonym=ECK2810;gene_synonym=JWR0206;gene_synonym=metZalpha;db_xref=EcoGene:EG30062 EMBL tRNA 2947387 2947463 . + . ID=.6111;gene=metZ;locus_tag=b2814;gene_synonym=ECK2810;gene_synonym=JWR0206;gene_synonym=metZalpha;product=tRNA-Met;note=anticodon: CAU;db_xref=ASAP:ABE-0009232;db_xref=EcoGene:EG30062 EMBL gene 2947497 2947573 . + . ID=.6112;gene=metW;locus_tag=b2815;gene_synonym=ECK2811;gene_synonym=JWR0207;db_xref=EcoGene:EG31117 EMBL tRNA 2947497 2947573 . + . ID=.6113;gene=metW;locus_tag=b2815;gene_synonym=ECK2811;gene_synonym=JWR0207;product=tRNA-Met;note=anticodon: CAU;db_xref=ASAP:ABE-0009234;db_xref=EcoGene:EG31117 EMBL gene 2947607 2947683 . + . ID=.6114;gene=metV;locus_tag=b2816;gene_synonym=ECK2812;gene_synonym=JWR0208;gene_synonym=metX;gene_synonym=metZbeta;db_xref=EcoGene:EG30060 EMBL tRNA 2947607 2947683 . + . ID=.6115;gene=metV;locus_tag=b2816;gene_synonym=ECK2812;gene_synonym=JWR0208;gene_synonym=metX;gene_synonym=metZbeta;product=tRNA-Met;note=anticodon: CAU;db_xref=ASAP:ABE-0009236;db_xref=EcoGene:EG30060 EMBL gene 2947757 2949010 . - . ID=.6116;gene=amiC;locus_tag=b2817;gene_synonym=ECK2813;gene_synonym=JW5449;gene_synonym=ygdN;db_xref=EcoGene:EG13086 EMBL CDS 2947757 2949010 . - 0 ID=.6117;gene=amiC;locus_tag=b2817;gene_synonym=ECK2813;gene_synonym=JW5449;gene_synonym=ygdN;ec_number=3.5.1.28;function=putative enzyme%3B Not classified;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_process: GO:0009252 - peptidoglycan biosynthetic process;codon_start=1;transl_table=11;product=N-acetylmuramoyl-L-alanine amidase;protein_id=AAC75856.2;db_xref=GI:87082163;db_xref=ASAP:ABE-0009238;db_xref=UniProtKB/Swiss-Prot:P63883;db_xref=EcoGene:EG13086 EMBL gene 2949242 2950573 . + . ID=.6118;gene=argA;locus_tag=b2818;gene_synonym=Arg1;gene_synonym=Arg2;gene_synonym=argB;gene_synonym=ECK2814;gene_synonym=JW2786;db_xref=EcoGene:EG10063 EMBL CDS 2949242 2950573 . + 0 ID=.6119;gene=argA;locus_tag=b2818;gene_synonym=Arg1;gene_synonym=Arg2;gene_synonym=argB;gene_synonym=ECK2814;gene_synonym=JW2786;ec_number=2.3.1.1;function=enzyme%3B Amino acid biosynthesis: Arginine;note=N-acetylglutamate synthase%3B amino acid acetyltransferase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006526 - arginine biosynthetic process;codon_start=1;transl_table=11;product=amino acid N-acetyltransferase and inactive acetylglutamate kinase;protein_id=AAC75857.1;db_xref=GI:1789181;db_xref=ASAP:ABE-0009245;db_xref=UniProtKB/Swiss-Prot:P0A6C5;db_xref=EcoGene:EG10063 EMBL repeat_region 2950613 2950626 . + . ID=.6120;note=REP207 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 2950635 2952461 . - . ID=.6121;gene=recD;locus_tag=b2819;gene_synonym=ECK2815;gene_synonym=hopE;gene_synonym=JW2787;db_xref=EcoGene:EG10826 EMBL CDS 2950635 2952461 . - 0 ID=.6122;gene=recD;locus_tag=b2819;gene_synonym=ECK2815;gene_synonym=hopE;gene_synonym=JW2787;ec_number=3.1.11.5;function=enzyme%3B Degradation of DNA;experiment=N-terminus verified by Edman degradation: PMID 1618858;note=DNA helicase%2C ATP-dependent dsDNA/ssDNA exonuclease V subunit%2C ssDNA endonuclease%3B GO_process: GO:0006308 - DNA catabolic process%3B GO_process: GO:0006310 - DNA recombination;codon_start=1;transl_table=11;product=exonuclease V (RecBCD complex)%2C alpha chain;protein_id=AAC75858.1;db_xref=GI:1789182;db_xref=ASAP:ABE-0009247;db_xref=UniProtKB/Swiss-Prot:P04993;db_xref=EcoGene:EG10826 EMBL gene 2952461 2956003 . - . ID=.6123;gene=recB;locus_tag=b2820;gene_synonym=ECK2816;gene_synonym=ior;gene_synonym=JW2788;gene_synonym=rorA;db_xref=EcoGene:EG10824 EMBL CDS 2952461 2956003 . - 0 ID=.6124;gene=recB;locus_tag=b2820;gene_synonym=ECK2816;gene_synonym=ior;gene_synonym=JW2788;gene_synonym=rorA;ec_number=3.1.11.5;function=enzyme%3B Degradation of DNA;note=DNA helicase%2C ATP-dependent dsDNA/ssDNA exonuclease V subunit%2C ssDNA endonuclease%3B GO_process: GO:0006308 - DNA catabolic process%3B GO_process: GO:0006310 - DNA recombination;codon_start=1;transl_table=11;product=exonuclease V (RecBCD complex)%2C beta subunit;protein_id=AAC75859.1;db_xref=GI:1789183;db_xref=ASAP:ABE-0009249;db_xref=UniProtKB/Swiss-Prot:P08394;db_xref=EcoGene:EG10824 EMBL gene 2955996 2958884 . - . ID=.6125;gene=ptrA;locus_tag=b2821;gene_synonym=ECK2817;gene_synonym=JW2789;gene_synonym=ptr;db_xref=EcoGene:EG10786 EMBL CDS 2955996 2958884 . - 0 ID=.6126;gene=ptrA;locus_tag=b2821;gene_synonym=ECK2817;gene_synonym=JW2789;gene_synonym=ptr;ec_number=3.4.24.55;function=enzyme%3B Degradation of proteins%2C peptides%2C glyco;codon_start=1;transl_table=11;product=protease III;protein_id=AAC75860.1;db_xref=GI:2367164;db_xref=ASAP:ABE-0009252;db_xref=UniProtKB/Swiss-Prot:P05458;db_xref=EcoGene:EG10786 EMBL gene 2959060 2962428 . - . ID=.6127;gene=recC;locus_tag=b2822;gene_synonym=ECK2818;gene_synonym=JW2790;db_xref=EcoGene:EG10825 EMBL CDS 2959060 2962428 . - 0 ID=.6128;gene=recC;locus_tag=b2822;gene_synonym=ECK2818;gene_synonym=JW2790;ec_number=3.1.11.5;function=enzyme%3B Degradation of DNA;experiment=N-terminus verified by Edman degradation: PMID 3520484;note=DNA helicase%2C ATP-dependent dsDNA/ssDNA exonuclease V subunit%2C ssDNA endonuclease%3B GO_process: GO:0006308 - DNA catabolic process%3B GO_process: GO:0006310 - DNA recombination;codon_start=1;transl_table=11;product=exonuclease V (RecBCD complex)%2C gamma chain;protein_id=AAC75861.1;db_xref=GI:1789186;db_xref=ASAP:ABE-0009255;db_xref=UniProtKB/Swiss-Prot:P07648;db_xref=EcoGene:EG10825 EMBL gene 2962441 2962764 . - . ID=.6129;gene=ppdC;locus_tag=b2823;gene_synonym=ECK2819;gene_synonym=JW2791;gene_synonym=ygdA;db_xref=EcoGene:EG11154 EMBL CDS 2962441 2962764 . - 0 ID=.6130;gene=ppdC;locus_tag=b2823;gene_synonym=ECK2819;gene_synonym=JW2791;gene_synonym=ygdA;function=putative structural component%3B Surface structures;note=prepilin peptidase dependent protein C%3B GO_component: GO:0009289 - pilus%3B GO_process: GO:0009101 - glycoprotein biosynthetic process;codon_start=1;transl_table=11;product=putative prepilin peptidase-dependent protein;protein_id=AAC75862.1;db_xref=GI:1789187;db_xref=ASAP:ABE-0009257;db_xref=UniProtKB/Swiss-Prot:P08372;db_xref=EcoGene:EG11154 EMBL gene 2962749 2963156 . - . ID=.6131;gene=ygdB;locus_tag=b2824;gene_synonym=ECK2820;gene_synonym=JW5450;db_xref=EcoGene:EG11155 EMBL CDS 2962749 2963156 . - 0 ID=.6132;gene=ygdB;locus_tag=b2824;gene_synonym=ECK2820;gene_synonym=JW5450;codon_start=1;transl_table=11;product=DUF2509 family protein;protein_id=AAC75863.2;db_xref=GI:87082164;db_xref=ASAP:ABE-0009261;db_xref=UniProtKB/Swiss-Prot:P08370;db_xref=EcoGene:EG11155 EMBL gene 2963153 2963716 . - . ID=.6133;gene=ppdB;locus_tag=b2825;gene_synonym=ECK2821;gene_synonym=JW5451;gene_synonym=ygdC;db_xref=EcoGene:EG11156 EMBL CDS 2963153 2963716 . - 0 ID=.6134;gene=ppdB;locus_tag=b2825;gene_synonym=ECK2821;gene_synonym=JW5451;gene_synonym=ygdC;function=putative structural component%3B Surface structures;note=prepilin peptidase dependent protein B%3B GO_component: GO:0009289 - pilus%3B GO_process: GO:0009101 - glycoprotein biosynthetic process;codon_start=1;transl_table=11;product=putative prepilin peptidase-dependent protein;protein_id=AAC75864.1;db_xref=GI:1789189;db_xref=ASAP:ABE-0009263;db_xref=UniProtKB/Swiss-Prot:P08371;db_xref=EcoGene:EG11156 EMBL gene 2963707 2964177 . - . ID=.6135;gene=ppdA;locus_tag=b2826;gene_synonym=ECK2822;gene_synonym=JW2794;db_xref=EcoGene:EG12081 EMBL CDS 2963707 2964177 . - 0 ID=.6136;gene=ppdA;locus_tag=b2826;gene_synonym=ECK2822;gene_synonym=JW2794;function=putative structural component%3B Surface structures;note=prepilin peptidase dependent protein A%3B GO_component: GO:0009289 - pilus%3B GO_process: GO:0009101 - glycoprotein biosynthetic process;codon_start=1;transl_table=11;product=putative prepilin peptidase-dependent protein;protein_id=AAC75865.1;db_xref=GI:1789190;db_xref=ASAP:ABE-0009266;db_xref=UniProtKB/Swiss-Prot:P33554;db_xref=EcoGene:EG12081 EMBL gene 2964361 2965155 . - . ID=.6137;gene=thyA;locus_tag=b2827;gene_synonym=ECK2823;gene_synonym=JW2795;db_xref=EcoGene:EG11002 EMBL CDS 2964361 2965155 . - 0 ID=.6138;gene=thyA;locus_tag=b2827;gene_synonym=ECK2823;gene_synonym=JW2795;ec_number=2.1.1.45;function=enzyme%3B 2'-Deoxyribonucleotide metabolism;experiment=N-terminus verified by Edman degradation: PMID 6308660;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion;codon_start=1;transl_table=11;product=thymidylate synthetase;protein_id=AAC75866.1;db_xref=GI:1789191;db_xref=ASAP:ABE-0009268;db_xref=UniProtKB/Swiss-Prot:P0A884;db_xref=EcoGene:EG11002 EMBL gene 2965162 2966037 . - . ID=.6139;gene=lgt;locus_tag=b2828;gene_synonym=ECK2824;gene_synonym=JW2796;gene_synonym=umpA;db_xref=EcoGene:EG12128 EMBL CDS 2965162 2966037 . - 0 ID=.6140;gene=lgt;locus_tag=b2828;gene_synonym=ECK2824;gene_synonym=JW2796;gene_synonym=umpA;ec_number=2.4.99.-;function=enzyme%3B Macromolecule synthesis%2C modification: Phospholipids;note=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase%3B a major membrane phospholipid%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0008654 - phospholipid biosynthetic process%3B GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase;protein_id=AAC75867.1;db_xref=GI:1789192;db_xref=ASAP:ABE-0009270;db_xref=UniProtKB/Swiss-Prot:P60955;db_xref=EcoGene:EG12128 EMBL gene 2966188 2968434 . - . ID=.6141;gene=ptsP;locus_tag=b2829;gene_synonym=ECK2825;gene_synonym=JW2797;gene_synonym=ygdF;gene_synonym=ygdO;db_xref=EcoGene:EG12188 EMBL CDS 2966188 2968434 . - 0 ID=.6142;gene=ptsP;locus_tag=b2829;gene_synonym=ECK2825;gene_synonym=JW2797;gene_synonym=ygdF;gene_synonym=ygdO;ec_number=2.7.3.9;function=enzyme%3B Transport of small molecules: Other;note=PTS system%2C enzyme I%2C transcriptional regulator (with NPR and NTR proteins)%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=PEP-protein phosphotransferase enzyme I%3B GAF domain containing protein;protein_id=AAC75868.1;db_xref=GI:1789193;db_xref=ASAP:ABE-0009274;db_xref=UniProtKB/Swiss-Prot:P37177;db_xref=EcoGene:EG12188 EMBL gene 2968447 2968977 . - . ID=.6143;gene=rppH;locus_tag=b2830;gene_synonym=ECK2826;gene_synonym=JW2798;gene_synonym=nudH;gene_synonym=ygdP;db_xref=EcoGene:EG13091 EMBL CDS 2968447 2968977 . - 0 ID=.6144;gene=rppH;locus_tag=b2830;gene_synonym=ECK2826;gene_synonym=JW2798;gene_synonym=nudH;gene_synonym=ygdP;ec_number=3.6.1.-;function=putative factor%3B Not classified;note=putative invasion protein;codon_start=1;transl_table=11;product=RNA pyrophosphohydrolase;protein_id=AAC75869.1;db_xref=GI:1789194;db_xref=ASAP:ABE-0009276;db_xref=UniProtKB/Swiss-Prot:P0A776;db_xref=EcoGene:EG13091 EMBL gene 2969662 2970351 . + . ID=.6145;gene=mutH;locus_tag=b2831;gene_synonym=ECK2827;gene_synonym=JW2799;gene_synonym=mutR;gene_synonym=prv;db_xref=EcoGene:EG10624 EMBL CDS 2969662 2970351 . + 0 ID=.6146;gene=mutH;locus_tag=b2831;gene_synonym=ECK2827;gene_synonym=JW2799;gene_synonym=mutR;gene_synonym=prv;function=enzyme%3B DNA - replication%2C repair%2C restriction/modification;note=methyl-directed mismatch repair%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006281 - DNA repair;codon_start=1;transl_table=11;product=methyl-directed mismatch repair protein;protein_id=AAC75870.1;db_xref=GI:1789196;db_xref=ASAP:ABE-0009287;db_xref=UniProtKB/Swiss-Prot:P06722;db_xref=EcoGene:EG10624 EMBL gene 2970420 2971133 . + . ID=.6147;gene=ygdQ;locus_tag=b2832;gene_synonym=ECK2828;gene_synonym=JW2800;db_xref=EcoGene:EG13092 EMBL CDS 2970420 2971133 . + 0 ID=.6148;gene=ygdQ;locus_tag=b2832;gene_synonym=ECK2828;gene_synonym=JW2800;function=putative transport%3B Not classified;note=putative transport protein;codon_start=1;transl_table=11;product=UPF0053 family inner membrane protein;protein_id=AAC75871.1;db_xref=GI:1789197;db_xref=ASAP:ABE-0009290;db_xref=UniProtKB/Swiss-Prot:P67127;db_xref=EcoGene:EG13092 EMBL gene 2971271 2971489 . + . ID=.6149;gene=ygdR;locus_tag=b2833;gene_synonym=ECK2829;gene_synonym=JW2801;db_xref=EcoGene:EG13076 EMBL CDS 2971271 2971489 . + 0 ID=.6150;gene=ygdR;locus_tag=b2833;gene_synonym=ECK2829;gene_synonym=JW2801;codon_start=1;transl_table=11;product=DUF903 family verified lipoprotein;protein_id=AAC75872.1;db_xref=GI:1789198;db_xref=ASAP:ABE-0009293;db_xref=UniProtKB/Swiss-Prot:P65294;db_xref=EcoGene:EG13076 EMBL gene 2971597 2972637 . + . ID=.6151;gene=tas;locus_tag=b2834;gene_synonym=ECK2830;gene_synonym=JW2802;gene_synonym=ygdS;db_xref=EcoGene:EG13093 EMBL CDS 2971597 2972637 . + 0 ID=.6152;gene=tas;locus_tag=b2834;gene_synonym=ECK2830;gene_synonym=JW2802;gene_synonym=ygdS;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=putative NADP(H)-dependent aldo-keto reductase;protein_id=AAC75873.1;db_xref=GI:1789199;db_xref=ASAP:ABE-0009298;db_xref=UniProtKB/Swiss-Prot:P0A9T4;db_xref=EcoGene:EG13093 EMBL gene 2972669 2973862 . - . ID=.6153;gene=lplT;locus_tag=b2835;gene_synonym=ECK2831;gene_synonym=JW2803;gene_synonym=ygeD;db_xref=EcoGene:EG12455 EMBL CDS 2972669 2973862 . - 0 ID=.6154;gene=lplT;locus_tag=b2835;gene_synonym=ECK2831;gene_synonym=JW2803;gene_synonym=ygeD;function=orf%3B Drug/analog sensitivity;note=putative resistance proteins%3B GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=lysophospholipid transporter;protein_id=AAC75874.1;db_xref=GI:1789200;db_xref=ASAP:ABE-0009300;db_xref=UniProtKB/Swiss-Prot:P39196;db_xref=EcoGene:EG12455 EMBL gene 2973855 2976014 . - . ID=.6155;gene=aas;locus_tag=b2836;gene_synonym=ECK2832;gene_synonym=JW2804;db_xref=EcoGene:EG11679 EMBL CDS 2973855 2976014 . - 0 ID=.6156;gene=aas;locus_tag=b2836;gene_synonym=ECK2832;gene_synonym=JW2804;ec_number=2.3.1.40;ec_number=6.2.1.20;function=enzyme%3B Fatty acid and phosphatidic acid biosynthesis;note=2-acyl-glycerophospho-ethanolamine acyltransferase%3B acyl-acyl-carrier protein synthetase%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=fused 2-acylglycerophospho-ethanolamine acyl transferase/acyl-acyl carrier protein synthetase;protein_id=AAC75875.1;db_xref=GI:1789201;db_xref=ASAP:ABE-0009302;db_xref=UniProtKB/Swiss-Prot:P31119;db_xref=EcoGene:EG11679 EMBL gene 2976102 2976189 . - . ID=.6157;gene=omrA;locus_tag=b4444;gene_synonym=ECK2833;gene_synonym=JWR0248;gene_synonym=PAIR2a;gene_synonym=psrA12;gene_synonym=rygA;gene_synonym=sraE;gene_synonym=t59;db_xref=EcoGene:EG31157 EMBL ncRNA 2976102 2976189 . - . ID=.6158;ncrna_class=antisense_RNA;gene=omrA;locus_tag=b4444;gene_synonym=ECK2833;gene_synonym=JWR0248;gene_synonym=PAIR2a;gene_synonym=psrA12;gene_synonym=rygA;gene_synonym=sraE;gene_synonym=t59;product=sRNA antisense regulator downregulates OM proteins and curli%3B positively regulated by OmpR/EnvZ%2C Hfq-dependent;note=identified in a large scale screen;db_xref=ASAP:ABE-0047264;db_xref=EcoGene:EG31157 EMBL gene 2976304 2976385 . - . ID=.6159;gene=omrB;locus_tag=b4445;gene_synonym=ECK2834;gene_synonym=JWR0249;gene_synonym=PAIR2b;gene_synonym=rygB;gene_synonym=t59;db_xref=EcoGene:EG31158 EMBL ncRNA 2976304 2976385 . - . ID=.6160;ncrna_class=antisense_RNA;gene=omrB;locus_tag=b4445;gene_synonym=ECK2834;gene_synonym=JWR0249;gene_synonym=PAIR2b;gene_synonym=rygB;gene_synonym=t59;product=sRNA antisense regulator downregulates OM proteins and curli%3B positively regulated by OmpR/EnvZ%2C Hfq-dependent;note=identified in a large scale screen;db_xref=ASAP:ABE-0047265;db_xref=EcoGene:EG31158 EMBL gene 2976599 2977630 . + . ID=.6161;gene=galR;locus_tag=b2837;gene_synonym=ECK2835;gene_synonym=JW2805;db_xref=EcoGene:EG10364 EMBL CDS 2976599 2977630 . + 0 ID=.6162;gene=galR;locus_tag=b2837;gene_synonym=ECK2835;gene_synonym=JW2805;function=regulator%3B Degradation of small molecules: Carbon compounds;note=repressor of galETK operon%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=galactose-inducible d-galactose regulon transcriptional repressor%3B autorepressor;protein_id=AAC75876.1;db_xref=GI:1789202;db_xref=ASAP:ABE-0009307;db_xref=UniProtKB/Swiss-Prot:P03024;db_xref=EcoGene:EG10364 EMBL gene 2977637 2978899 . - . ID=.6163;gene=lysA;locus_tag=b2838;gene_synonym=ECK2836;gene_synonym=JW2806;db_xref=EcoGene:EG10549 EMBL CDS 2977637 2978899 . - 0 ID=.6164;gene=lysA;locus_tag=b2838;gene_synonym=ECK2836;gene_synonym=JW2806;ec_number=4.1.1.20;function=enzyme%3B Amino acid biosynthesis: Lysine;note=diaminopimelate decarboxylase%3B GO_process: GO:0009089 - lysine biosynthetic process via diaminopimelate;codon_start=1;transl_table=11;product=diaminopimelate decarboxylase%2C PLP-binding;protein_id=AAC75877.1;db_xref=GI:1789203;db_xref=ASAP:ABE-0009309;db_xref=UniProtKB/Swiss-Prot:P00861;db_xref=EcoGene:EG10549 EMBL gene 2979021 2979956 . + . ID=.6165;gene=lysR;locus_tag=b2839;gene_synonym=ECK2837;gene_synonym=JW2807;db_xref=EcoGene:EG10551 EMBL CDS 2979021 2979956 . + 0 ID=.6166;gene=lysR;locus_tag=b2839;gene_synonym=ECK2837;gene_synonym=JW2807;function=regulator%3B Amino acid biosynthesis: Lysine;note=positive regulator for lys%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0009089 - lysine biosynthetic process via diaminopimelate%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=transcriptional activator of lysA%3B autorepressor;protein_id=AAC75878.1;db_xref=GI:1789204;db_xref=ASAP:ABE-0009313;db_xref=UniProtKB/Swiss-Prot:P03030;db_xref=EcoGene:EG10551 EMBL gene 2979943 2980635 . - . ID=.6167;gene=ygeA;locus_tag=b2840;gene_synonym=ECK2838;gene_synonym=JW2808;db_xref=EcoGene:EG11157 EMBL CDS 2979943 2980635 . - 0 ID=.6168;gene=ygeA;locus_tag=b2840;gene_synonym=ECK2838;gene_synonym=JW2808;function=putative transport%3B Drug/analog sensitivity;note=putative resistance proteins%3B GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=Asp/Glu_racemase family protein;protein_id=AAC75879.1;db_xref=GI:1789205;db_xref=ASAP:ABE-0009315;db_xref=UniProtKB/Swiss-Prot:P03813;db_xref=EcoGene:EG11157 EMBL repeat_region 2980733 2980755 . + . ID=.6169;note=REP208 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 2980764 2982182 . - . ID=.6170;gene=araE;locus_tag=b2841;gene_synonym=ECK2839;gene_synonym=JW2809;db_xref=EcoGene:EG10056 EMBL CDS 2980764 2982182 . - 0 ID=.6171;gene=araE;locus_tag=b2841;gene_synonym=ECK2839;gene_synonym=JW2809;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=low-affinity L-arabinose transport system proton symport protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_function: GO:0015524 - L-arabinose/beta-D-thiogalactopyranoside:hydrogen antiporter activity%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=arabinose transporter;protein_id=AAC75880.1;db_xref=GI:1789207;db_xref=ASAP:ABE-0009319;db_xref=UniProtKB/Swiss-Prot:P0AE24;db_xref=EcoGene:EG10056 EMBL gene 2982497 2983258 . - . ID=.6172;gene=kduD;locus_tag=b2842;gene_synonym=ECK2840;gene_synonym=JW2810;gene_synonym=ygeC;gene_synonym=yqeD;db_xref=EcoGene:EG12361 EMBL CDS 2982497 2983258 . - 0 ID=.6173;gene=kduD;locus_tag=b2842;gene_synonym=ECK2840;gene_synonym=JW2810;gene_synonym=ygeC;gene_synonym=yqeD;ec_number=1.1.1.127;ec_number=1.1.1.149;function=enzyme%3B Degradation of small molecules: Carbon compounds;codon_start=1;transl_table=11;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase%3B KDG oxidoreductase%3B 20-ketosteroid reductase;protein_id=AAC75881.1;db_xref=GI:1789208;db_xref=ASAP:ABE-0009330;db_xref=UniProtKB/Swiss-Prot:P37769;db_xref=EcoGene:EG12361 EMBL gene 2983288 2984124 . - . ID=.6174;gene=kduI;locus_tag=b2843;gene_synonym=ECK2841;gene_synonym=JW2811;gene_synonym=yqeE;db_xref=EcoGene:EG13096 EMBL CDS 2983288 2984124 . - 0 ID=.6175;gene=kduI;locus_tag=b2843;gene_synonym=ECK2841;gene_synonym=JW2811;gene_synonym=yqeE;function=enzyme%3B Degradation of small molecules: Carbon compounds;experiment=N-terminus verified by Edman degradation: PMID 9761873;note=homolog of pectin degrading enzyme 5-keto 4-deoxyuronate isomerase%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=hexuronate isomerase;protein_id=AAC75882.1;db_xref=GI:1789209;db_xref=ASAP:ABE-0009332;db_xref=UniProtKB/Swiss-Prot:Q46938;db_xref=EcoGene:EG13096 EMBL gene 2984411 2985592 . - . ID=.6176;gene=yqeF;locus_tag=b2844;gene_synonym=ECK2842;gene_synonym=JW5453;db_xref=EcoGene:EG13097 EMBL CDS 2984411 2985592 . - 0 ID=.6177;gene=yqeF;locus_tag=b2844;gene_synonym=ECK2842;gene_synonym=JW5453;function=enzyme%3B Not classified;note=putative acyltransferase;codon_start=1;transl_table=11;product=short chain acyltransferase;protein_id=AAC75883.2;db_xref=GI:87082165;db_xref=ASAP:ABE-0009335;db_xref=UniProtKB/Swiss-Prot:Q46939;db_xref=EcoGene:EG13097 EMBL gene 2985847 2987076 . + . ID=.6178;gene=yqeG;locus_tag=b2845;gene_synonym=ECK2843;gene_synonym=JW2813;db_xref=EcoGene:EG13098 EMBL CDS 2985847 2987076 . + 0 ID=.6179;gene=yqeG;locus_tag=b2845;gene_synonym=ECK2843;gene_synonym=JW2813;function=putative transport%3B Not classified;note=putative transporter protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative transporter;protein_id=AAC75884.1;db_xref=GI:1789211;db_xref=ASAP:ABE-0009345;db_xref=UniProtKB/Swiss-Prot:P63340;db_xref=EcoGene:EG13098 EMBL gene 2987536 2988168 . + . ID=.6180;gene=yqeH;locus_tag=b2846;gene_synonym=ECK2844;gene_synonym=JW5454;db_xref=EcoGene:EG13099 EMBL CDS 2987536 2988168 . + 0 ID=.6181;gene=yqeH;locus_tag=b2846;gene_synonym=ECK2844;gene_synonym=JW5454;codon_start=1;transl_table=11;product=putative LuxR family transcriptional regulator;protein_id=AAC75885.2;db_xref=GI:87082166;db_xref=ASAP:ABE-0009349;db_xref=UniProtKB/Swiss-Prot:Q46941;db_xref=EcoGene:EG13099 EMBL gene 2988502 2989311 . + . ID=.6182;gene=yqeI;locus_tag=b2847;gene_synonym=ECK2845;gene_synonym=JW2815;db_xref=EcoGene:EG13100 EMBL CDS 2988502 2989311 . + 0 ID=.6183;gene=yqeI;locus_tag=b2847;gene_synonym=ECK2845;gene_synonym=JW2815;function=putative transport%3B Not classified;note=putative sensory transducer;codon_start=1;transl_table=11;product=putative transcriptional regulator;protein_id=AAC75886.1;db_xref=GI:1789213;db_xref=ASAP:ABE-0009352;db_xref=UniProtKB/Swiss-Prot:Q46942;db_xref=EcoGene:EG13100 EMBL gene 2989304 2989786 . + . ID=.6184;gene=yqeJ;locus_tag=b2848;gene_synonym=ECK2846;gene_synonym=JW5455;db_xref=EcoGene:EG13101 EMBL CDS 2989304 2989786 . + 0 ID=.6185;gene=yqeJ;locus_tag=b2848;gene_synonym=ECK2846;gene_synonym=JW5455;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC75887.2;db_xref=GI:87082167;db_xref=ASAP:ABE-0009354;db_xref=UniProtKB/Swiss-Prot:Q46943;db_xref=EcoGene:EG13101 EMBL gene 2989819 2989899 . - . ID=.6186;gene=yqeL;locus_tag=b4683;gene_synonym=ECK4498;db_xref=EcoGene:EG14488 EMBL CDS 2989819 2989899 . - 0 ID=.6187;gene=yqeL;locus_tag=b4683;gene_synonym=ECK4498;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=ACO60005.1;db_xref=GI:226510971;db_xref=UniProtKB/Swiss-Prot:C1P613;db_xref=EcoGene:EG14488 EMBL gene 2989935 2990360 . - . ID=.6188;gene=yqeK;locus_tag=b2849;gene_synonym=ECK2847;gene_synonym=JW2817;db_xref=EcoGene:EG13274 EMBL CDS 2989935 2990360 . - 0 ID=.6189;gene=yqeK;locus_tag=b2849;gene_synonym=ECK2847;gene_synonym=JW2817;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC75888.2;db_xref=GI:87082168;db_xref=ASAP:ABE-0009356;db_xref=UniProtKB/Swiss-Prot:P77136;db_xref=EcoGene:EG13274 EMBL gene 2990554 2991043 . + . ID=.6190;gene=ygeF;locus_tag=b2850;gene_synonym=ECK2848;gene_synonym=JW2818;pseudo=true;db_xref=EcoGene:EG13036 EMBL biological_region 2990554 2991043 . + 0 ID=.6191;featflags=type:CDS;gene=ygeF;locus_tag=b2850;gene_synonym=ECK2848;gene_synonym=JW2818;note=pseudogene;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0009361;db_xref=UniProtKB/Swiss-Prot:Q46786;db_xref=EcoGene:EG13036 EMBL CDS 2990554 2990949 . + 0 Parent=.6191 EMBL CDS 2990948 2991043 . + 0 Parent=.6191 EMBL gene 2991268 2991759 . + . ID=.6194;gene=ygeG;locus_tag=b2851;gene_synonym=ECK2849;gene_synonym=JW2819;db_xref=EcoGene:EG13037 EMBL CDS 2991268 2991759 . + 0 ID=.6195;gene=ygeG;locus_tag=b2851;gene_synonym=ECK2849;gene_synonym=JW2819;codon_start=1;transl_table=11;product=SycD-like chaperone family TPR-repeat-containing protein;protein_id=AAC75890.1;db_xref=GI:1789215;db_xref=ASAP:ABE-0009364;db_xref=UniProtKB/Swiss-Prot:Q46787;db_xref=EcoGene:EG13037 EMBL gene 2992094 2993470 . + . ID=.6196;gene=ygeH;locus_tag=b2852;gene_synonym=ECK2850;gene_synonym=JW2820;db_xref=EcoGene:EG13038 EMBL CDS 2992094 2993470 . + 0 ID=.6197;gene=ygeH;locus_tag=b2852;gene_synonym=ECK2850;gene_synonym=JW2820;function=putative factor%3B Not classified;note=putative invasion protein;codon_start=1;transl_table=11;product=putative transcriptional regulator;protein_id=AAC75891.1;db_xref=GI:1789216;db_xref=ASAP:ABE-0009368;db_xref=UniProtKB/Swiss-Prot:P76639;db_xref=EcoGene:EG13038 EMBL gene 2993638 2993856 . + . ID=.6198;gene=ygeI;locus_tag=b2853;gene_synonym=ECK2851;gene_synonym=JW5456;db_xref=EcoGene:EG13039 EMBL CDS 2993638 2993856 . + 0 ID=.6199;gene=ygeI;locus_tag=b2853;gene_synonym=ECK2851;gene_synonym=JW5456;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC75892.1;db_xref=GI:1789217;db_xref=ASAP:ABE-0009374;db_xref=UniProtKB/Swiss-Prot:Q46789;db_xref=EcoGene:EG13039 EMBL gene 2993939 2994441 . + . ID=.6200;gene=pbl;locus_tag=b2854;gene_synonym=ECK2852;gene_synonym=JW5457;gene_synonym=ygeJ;pseudo=true;db_xref=EcoGene:EG13040 EMBL biological_region 2993939 2994441 . + 0 ID=.6201;featflags=type:CDS;gene=pbl;locus_tag=b2854;gene_synonym=ECK2852;gene_synonym=JW5457;gene_synonym=ygeJ;note=pseudogene%2C peptidoglycan-binding enzyme family;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0009377;db_xref=UniProtKB/Swiss-Prot:Q46790;db_xref=EcoGene:EG13040 EMBL CDS 2993939 2994382 . + 0 Parent=.6201 EMBL CDS 2994382 2994441 . + 0 Parent=.6201 EMBL gene 2994460 2995092 . - . ID=.6204;gene=ygeK;locus_tag=b2856;gene_synonym=ECK2853;gene_synonym=JW5458;gene_synonym=ygeL;pseudo=true;db_xref=EcoGene:EG13041 EMBL CDS 2994460 2995092 . - 0 ID=.6205;gene=ygeK;locus_tag=b2856;gene_synonym=ECK2853;gene_synonym=JW5458;gene_synonym=ygeL;note=pseudogene%2C response regulator family%2C part of T3SS PAI ETT2 remnant%3B putative 2-component transcriptional regulator%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0006350 - transcription;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0009379;db_xref=ASAP:ABE-0009381;db_xref=UniProtKB/Swiss-Prot:Q46791;db_xref=EcoGene:EG13041 EMBL gene 2995314 2996020 . - . ID=.6206;gene=ygeN;locus_tag=b2858;gene_synonym=ECK2855;gene_synonym=JW5459;gene_synonym=ygeM;pseudo=true;db_xref=EcoGene:EG13044 EMBL biological_region 2995314 2996020 . - 0 ID=.6207;featflags=type:CDS;gene=ygeN;locus_tag=b2858;gene_synonym=ECK2855;gene_synonym=JW5459;gene_synonym=ygeM;note=pseudogene%2C orgB family%2C part of T3SS PAI ETT2 remnant;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0009385;db_xref=ASAP:ABE-0009387;db_xref=UniProtKB/Swiss-Prot:Q46793;db_xref=EcoGene:EG13044 EMBL CDS 2995314 2995760 . - 0 Parent=.6207 EMBL CDS 2995760 2996020 . - 0 Parent=.6207 EMBL gene 2995962 2996360 . - . ID=.6210;gene=ygeO;locus_tag=b2859;gene_synonym=ECK2857;gene_synonym=JW5846;pseudo=true;db_xref=EcoGene:EG13045 EMBL CDS 2995962 2996360 . - 0 ID=.6211;gene=ygeO;locus_tag=b2859;gene_synonym=ECK2857;gene_synonym=JW5846;note=pseudogene%2C orgA family%2C part of T3SS PAI ETT2 remnant;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0009390;db_xref=UniProtKB/Swiss-Prot:Q46795;db_xref=EcoGene:EG13045 EMBL sequence_feature 2996361 2997691 . - . ID=.6212;note=*mobile_element_type: insertion sequence:IS2H EMBL gene 2996372 2997277 . - . ID=.6213;gene=insD1;locus_tag=b2860;gene_synonym=ECK0358;db_xref=EcoGene:EG40004 EMBL CDS 2996372 2997277 . - 0 ID=.6214;gene=insD1;locus_tag=b2860;gene_synonym=ECK0358;function=IS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;codon_start=1;transl_table=11;product=IS2 transposase TnpB;protein_id=AAC75899.1;db_xref=GI:1789224;db_xref=ASAP:ABE-0009395;db_xref=UniProtKB/Swiss-Prot:P0CF56;db_xref=EcoGene:EG40004 EMBL gene 2997235 2997600 . - . ID=.6215;gene=insC1;locus_tag=b2861;gene_synonym=ECK0357;db_xref=EcoGene:EG40003 EMBL CDS 2997235 2997600 . - 0 ID=.6216;gene=insC1;locus_tag=b2861;gene_synonym=ECK0357;function=IS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;codon_start=1;transl_table=11;product=IS2 repressor TnpA;protein_id=AAC75900.3;db_xref=GI:145693177;db_xref=ASAP:ABE-0009397;db_xref=UniProtKB/Swiss-Prot:P0CF43;db_xref=EcoGene:EG40003 EMBL gene 2997692 2998828 . - . ID=.6217;gene=ygeQ;locus_tag=b2863;gene_synonym=ECK2858;gene_synonym=JW2831;gene_synonym=ygeP;pseudo=true;db_xref=EcoGene:EG13047 EMBL CDS 2997692 2998828 . - 0 ID=.6218;gene=ygeQ;locus_tag=b2863;gene_synonym=ECK2858;gene_synonym=JW2831;gene_synonym=ygeP;note=pseudogene%2C glycosyl hydrolase family 15%2C part of T3SS PAI ETT2 remnant;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0009399;db_xref=ASAP:ABE-0009401;db_xref=UniProtKB/Swiss-Prot:Q46797;db_xref=EcoGene:EG13047 EMBL gene 2998984 2999057 . - . ID=.6219;gene=glyU;locus_tag=b2864;gene_synonym=ECK2860;gene_synonym=JWR0066;gene_synonym=suA36;gene_synonym=sufD;gene_synonym=sumB;gene_synonym=supT;db_xref=EcoGene:EG30037 EMBL tRNA 2998984 2999057 . - . ID=.6220;gene=glyU;locus_tag=b2864;gene_synonym=ECK2860;gene_synonym=JWR0066;gene_synonym=suA36;gene_synonym=sufD;gene_synonym=sumB;gene_synonym=supT;product=tRNA-Gly;note=anticodon: CCC;db_xref=ASAP:ABE-0009405;db_xref=EcoGene:EG30037 EMBL gene 2999136 2999891 . - . ID=.6221;gene=ygeR;locus_tag=b2865;gene_synonym=ECK2861;gene_synonym=JW2833;db_xref=EcoGene:EG13048 EMBL CDS 2999136 2999891 . - 0 ID=.6222;gene=ygeR;locus_tag=b2865;gene_synonym=ECK2861;gene_synonym=JW2833;function=putative structure%3B Not classified;note=putative lipoprotein%3B GO_component: GO:0009279 - cell outer membrane;codon_start=1;transl_table=11;product=LysM domain-containing M23 family putative peptidase%3B septation lipoprotein;protein_id=AAC75903.2;db_xref=GI:87082174;db_xref=ASAP:ABE-0009407;db_xref=UniProtKB/Swiss-Prot:Q46798;db_xref=EcoGene:EG13048 EMBL gene 3000345 3002603 . + . ID=.6223;gene=xdhA;locus_tag=b2866;gene_synonym=ECK2862;gene_synonym=JW5462;gene_synonym=ygeS;db_xref=EcoGene:EG13049 EMBL CDS 3000345 3002603 . + 0 ID=.6224;gene=xdhA;locus_tag=b2866;gene_synonym=ECK2862;gene_synonym=JW5462;gene_synonym=ygeS;codon_start=1;transl_table=11;product=xanthine dehydrogenase%2C molybdenum binding subunit;protein_id=AAC75904.1;db_xref=GI:1789230;db_xref=ASAP:ABE-0009413;db_xref=UniProtKB/Swiss-Prot:Q46799;db_xref=EcoGene:EG13049 EMBL gene 3002614 3003492 . + . ID=.6225;gene=xdhB;locus_tag=b2867;gene_synonym=ECK2863;gene_synonym=JW2835;gene_synonym=ygeT;db_xref=EcoGene:EG13050 EMBL CDS 3002614 3003492 . + 0 ID=.6226;gene=xdhB;locus_tag=b2867;gene_synonym=ECK2863;gene_synonym=JW2835;gene_synonym=ygeT;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=xanthine dehydrogenase%2C FAD-binding subunit;protein_id=AAC75905.1;db_xref=GI:1789231;db_xref=ASAP:ABE-0009416;db_xref=UniProtKB/Swiss-Prot:Q46800;db_xref=EcoGene:EG13050 EMBL gene 3003489 3003968 . + . ID=.6227;gene=xdhC;locus_tag=b2868;gene_synonym=ECK2864;gene_synonym=JW2836;gene_synonym=ygeU;db_xref=EcoGene:EG13051 EMBL CDS 3003489 3003968 . + 0 ID=.6228;gene=xdhC;locus_tag=b2868;gene_synonym=ECK2864;gene_synonym=JW2836;gene_synonym=ygeU;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=xanthine dehydrogenase%2C Fe-S binding subunit;protein_id=AAC75906.1;db_xref=GI:1789232;db_xref=ASAP:ABE-0009418;db_xref=UniProtKB/Swiss-Prot:Q46801;db_xref=EcoGene:EG13051 EMBL gene 3004008 3005786 . - . ID=.6229;gene=ygeV;locus_tag=b2869;gene_synonym=ECK2865;gene_synonym=JW2837;db_xref=EcoGene:EG13052 EMBL CDS 3004008 3005786 . - 0 ID=.6230;gene=ygeV;locus_tag=b2869;gene_synonym=ECK2865;gene_synonym=JW2837;function=putative regulator%3B Not classified;note=putative transcriptional regulator%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=putative sigma-54-interacting transcriptional activator;protein_id=AAC75907.1;db_xref=GI:1789233;db_xref=ASAP:ABE-0009420;db_xref=UniProtKB/Swiss-Prot:Q46802;db_xref=EcoGene:EG13052 EMBL gene 3006262 3007452 . + . ID=.6231;gene=ygeW;locus_tag=b2870;gene_synonym=ECK2866;gene_synonym=JW5463;db_xref=EcoGene:EG13053 EMBL CDS 3006262 3007452 . + 0 ID=.6232;gene=ygeW;locus_tag=b2870;gene_synonym=ECK2866;gene_synonym=JW5463;function=putative enzyme%3B Not classified;note=putative carbamoyl transferase;codon_start=1;transl_table=11;product=putative carbamoyltransferase;protein_id=AAT48152.1;db_xref=GI:48994908;db_xref=ASAP:ABE-0009425;db_xref=UniProtKB/Swiss-Prot:Q46803;db_xref=EcoGene:EG13053 EMBL gene 3007510 3008706 . + . ID=.6233;gene=ygeX;locus_tag=b2871;gene_synonym=ECK2867;gene_synonym=JW2839;db_xref=EcoGene:EG13054 EMBL CDS 3007510 3008706 . + 0 ID=.6234;gene=ygeX;locus_tag=b2871;gene_synonym=ECK2867;gene_synonym=JW2839;ec_number=4.3.1.15;function=enzyme%3B Not classified;note=putative diaminopropionate ammonia-lyase;codon_start=1;transl_table=11;product=2%2C3-diaminopropionate ammonia lyase%2C PLP-dependent;protein_id=AAC75909.1;db_xref=GI:1789235;db_xref=ASAP:ABE-0009428;db_xref=UniProtKB/Swiss-Prot:P66899;db_xref=EcoGene:EG13054 EMBL gene 3008764 3009975 . + . ID=.6235;gene=ygeY;locus_tag=b2872;gene_synonym=ECK2868;gene_synonym=JW2840;db_xref=EcoGene:EG13055 EMBL CDS 3008764 3009975 . + 0 ID=.6236;gene=ygeY;locus_tag=b2872;gene_synonym=ECK2868;gene_synonym=JW2840;function=putative enzyme%3B Not classified;note=putative deacetylase;codon_start=1;transl_table=11;product=putative peptidase;protein_id=AAC75910.1;db_xref=GI:1789236;db_xref=ASAP:ABE-0009434;db_xref=UniProtKB/Swiss-Prot:P65807;db_xref=EcoGene:EG13055 EMBL gene 3010028 3011413 . + . ID=.6237;gene=hyuA;locus_tag=b2873;gene_synonym=ECK2869;gene_synonym=JW2841;gene_synonym=ygeZ;db_xref=EcoGene:EG13056 EMBL CDS 3010028 3011413 . + 0 ID=.6238;gene=hyuA;locus_tag=b2873;gene_synonym=ECK2869;gene_synonym=JW2841;gene_synonym=ygeZ;ec_number=3.5.2.-;codon_start=1;transl_table=11;product=D-stereospecific phenylhydantoinase;protein_id=AAC75911.2;db_xref=GI:87082175;db_xref=ASAP:ABE-0009436;db_xref=UniProtKB/Swiss-Prot:Q46806;db_xref=EcoGene:EG13056 EMBL gene 3011461 3012393 . + . ID=.6239;gene=yqeA;locus_tag=b2874;gene_synonym=ECK2870;gene_synonym=JW2842;db_xref=EcoGene:EG13057 EMBL CDS 3011461 3012393 . + 0 ID=.6240;gene=yqeA;locus_tag=b2874;gene_synonym=ECK2870;gene_synonym=JW2842;function=putative enzyme%3B Not classified;note=putative kinase;codon_start=1;transl_table=11;product=putative amino acid kinase;protein_id=AAC75912.1;db_xref=GI:1789238;db_xref=ASAP:ABE-0009438;db_xref=UniProtKB/Swiss-Prot:Q46807;db_xref=EcoGene:EG13057 EMBL repeat_region 3012401 3012604 . + . ID=.6241;note=RIP209 (repetitive extragenic palindromic) element%3B contains 4 REP sequences and 1 IHF site EMBL gene 3012614 3014239 . - . ID=.6242;gene=yqeB;locus_tag=b2875;gene_synonym=ECK2871;gene_synonym=JW2843;db_xref=EcoGene:EG13058 EMBL CDS 3012614 3014239 . - 0 ID=.6243;gene=yqeB;locus_tag=b2875;gene_synonym=ECK2871;gene_synonym=JW2843;function=putative enzyme%3B Not classified;note=putative synthases;codon_start=1;transl_table=11;product=XdhC-CoxI family protein with NAD(P)-binding Rossman fold;protein_id=AAC75913.1;db_xref=GI:1789240;db_xref=ASAP:ABE-0009441;db_xref=UniProtKB/Swiss-Prot:Q46808;db_xref=EcoGene:EG13058 EMBL gene 3014287 3015057 . - . ID=.6244;gene=yqeC;locus_tag=b2876;gene_synonym=ECK2872;gene_synonym=JW5464;db_xref=EcoGene:EG13059 EMBL CDS 3014287 3015057 . - 0 ID=.6245;gene=yqeC;locus_tag=b2876;gene_synonym=ECK2872;gene_synonym=JW5464;codon_start=1;transl_table=11;product=putative selenium-dependent hydroxylase accessory protein;protein_id=AAC75914.2;db_xref=GI:87082176;db_xref=ASAP:ABE-0009443;db_xref=UniProtKB/Swiss-Prot:Q46809;db_xref=EcoGene:EG13059 EMBL gene 3015160 3015738 . + . ID=.6246;gene=mocA;locus_tag=b2877;gene_synonym=ECK2873;gene_synonym=JW2845;gene_synonym=ygfJ;db_xref=EcoGene:EG13060 EMBL CDS 3015160 3015738 . + 0 ID=.6247;gene=mocA;locus_tag=b2877;gene_synonym=ECK2873;gene_synonym=JW2845;gene_synonym=ygfJ;codon_start=1;transl_table=11;product=CTP:molybdopterin cytidylyltransferase;protein_id=AAC75915.1;db_xref=GI:1789242;db_xref=ASAP:ABE-0009447;db_xref=UniProtKB/Swiss-Prot:Q46810;db_xref=EcoGene:EG13060 EMBL gene 3016060 3019158 . + . ID=.6248;gene=ygfK;locus_tag=b2878;gene_synonym=ECK2874;gene_synonym=JW5923;db_xref=EcoGene:EG13061 EMBL CDS 3016060 3019158 . + 0 ID=.6249;gene=ygfK;locus_tag=b2878;gene_synonym=ECK2874;gene_synonym=JW5923;function=putative enzyme%3B Not classified;note=putative oxidoreductase%2C Fe-S subunit;codon_start=1;transl_table=11;product=putative Fe-S subunit oxidoreductase subunit;protein_id=AAC75916.1;db_xref=GI:1789243;db_xref=ASAP:ABE-0009450;db_xref=UniProtKB/Swiss-Prot:Q46811;db_xref=EcoGene:EG13061 EMBL gene 3019161 3020489 . + . ID=.6250;gene=ssnA;locus_tag=b2879;gene_synonym=ECK2875;gene_synonym=JW2847;gene_synonym=ygfL;db_xref=EcoGene:EG13062 EMBL CDS 3019161 3020489 . + 0 ID=.6251;gene=ssnA;locus_tag=b2879;gene_synonym=ECK2875;gene_synonym=JW2847;gene_synonym=ygfL;function=putative structure%3B Not classified;experiment=N-terminus verified by Edman degradation: PMID 10074077;note=GO_process: GO:0007049 - cell cycle;codon_start=1;transl_table=11;product=putative chlorohydrolase/aminohydrolase;protein_id=AAC75917.2;db_xref=GI:87082177;db_xref=ASAP:ABE-0009452;db_xref=UniProtKB/Swiss-Prot:Q46812;db_xref=EcoGene:EG13062 EMBL gene 3020540 3021319 . + . ID=.6252;gene=ygfM;locus_tag=b2880;gene_synonym=ECK2876;gene_synonym=JW2848;db_xref=EcoGene:EG13063 EMBL CDS 3020540 3021319 . + 0 ID=.6253;gene=ygfM;locus_tag=b2880;gene_synonym=ECK2876;gene_synonym=JW2848;codon_start=1;transl_table=11;product=putative oxidoreductase;protein_id=AAC75918.1;db_xref=GI:1789245;db_xref=ASAP:ABE-0009456;db_xref=UniProtKB/Swiss-Prot:P64557;db_xref=EcoGene:EG13063 EMBL gene 3021316 3024186 . + . ID=.6254;gene=xdhD;locus_tag=b2881;gene_synonym=ECK2877;gene_synonym=JW2849;gene_synonym=ygfN;db_xref=EcoGene:EG13064 EMBL CDS 3021316 3024186 . + 0 ID=.6255;gene=xdhD;locus_tag=b2881;gene_synonym=ECK2877;gene_synonym=JW2849;gene_synonym=ygfN;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=putative hypoxanthine oxidase%2C molybdopterin-binding/Fe-S binding;protein_id=AAC75919.1;db_xref=GI:1789246;db_xref=ASAP:ABE-0009459;db_xref=UniProtKB/Swiss-Prot:Q46814;db_xref=EcoGene:EG13064 EMBL gene 3024351 3025751 . + . ID=.6256;gene=xanQ;locus_tag=b2882;gene_synonym=ECK2878;gene_synonym=JW2850;gene_synonym=ygfO;db_xref=EcoGene:EG13065 EMBL CDS 3024351 3025751 . + 0 ID=.6257;gene=xanQ;locus_tag=b2882;gene_synonym=ECK2878;gene_synonym=JW2850;gene_synonym=ygfO;function=transport%3B Transport of small molecules: Nucleosides%2C purines%2C pyrimidines;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=xanthine permease;protein_id=AAC75920.2;db_xref=GI:87082178;db_xref=ASAP:ABE-0009463;db_xref=UniProtKB/Swiss-Prot:P67444;db_xref=EcoGene:EG13065 EMBL gene 3025766 3027085 . + . ID=.6258;gene=guaD;locus_tag=b2883;gene_synonym=ECK2879;gene_synonym=JW5466;gene_synonym=ygfP;db_xref=EcoGene:EG13066 EMBL CDS 3025766 3027085 . + 0 ID=.6259;gene=guaD;locus_tag=b2883;gene_synonym=ECK2879;gene_synonym=JW5466;gene_synonym=ygfP;ec_number=3.5.4.3;codon_start=1;transl_table=11;product=guanine deaminase;protein_id=AAC75921.1;db_xref=GI:1789249;db_xref=ASAP:ABE-0009465;db_xref=UniProtKB/Swiss-Prot:P76641;db_xref=EcoGene:EG13066 EMBL gene 3027121 3028488 . + . ID=.6260;gene=ghxQ;locus_tag=b4464;gene_synonym=ECK2880;gene_synonym=JW5467;gene_synonym=ygfQ;gene_synonym=ygfR;db_xref=EcoGene:EG13067 EMBL CDS 3027121 3028488 . + 0 ID=.6261;gene=ghxQ;locus_tag=b4464;gene_synonym=ECK2880;gene_synonym=JW5467;gene_synonym=ygfQ;gene_synonym=ygfR;function=transport%3B Transport of small molecules: Nucleosides%2C purines%2C pyrimidines;codon_start=1;transl_table=11;product=guanine/hypoxanthine permease%2C high affinity%3B guanine/hypoxanthine:H+ symporter;protein_id=AAT48153.1;db_xref=GI:48994909;db_xref=ASAP:ABE-0174113;db_xref=UniProtKB/Swiss-Prot:Q46817;db_xref=EcoGene:EG13067 EMBL gene 3028524 3029012 . - . ID=.6262;gene=ygfS;locus_tag=b2886;gene_synonym=ECK2881;gene_synonym=JW5468;db_xref=EcoGene:EG13069 EMBL CDS 3028524 3029012 . - 0 ID=.6263;gene=ygfS;locus_tag=b2886;gene_synonym=ECK2881;gene_synonym=JW5468;function=putative enzyme%3B Not classified;note=putative oxidoreductase%2C Fe-S subunit;codon_start=1;transl_table=11;product=putative 4Fe-4S ferredoxin-type oxidoreductase subunit;protein_id=AAC75924.2;db_xref=GI:87082179;db_xref=ASAP:ABE-0009471;db_xref=UniProtKB/Swiss-Prot:Q46819;db_xref=EcoGene:EG13069 EMBL gene 3029012 3030931 . - . ID=.6264;gene=ygfT;locus_tag=b2887;gene_synonym=ECK2882;gene_synonym=JW5469;db_xref=EcoGene:EG13070 EMBL CDS 3029012 3030931 . - 0 ID=.6265;gene=ygfT;locus_tag=b2887;gene_synonym=ECK2882;gene_synonym=JW5469;function=putative enzyme%3B Not classified;note=putative oxidoreductase%2C Fe-S subunit;codon_start=1;transl_table=11;product=putative oxidoreductase%2C Fe-S subunit/nucleotide-binding subunit;protein_id=AAC75925.2;db_xref=GI:87082180;db_xref=ASAP:ABE-0009473;db_xref=UniProtKB/Swiss-Prot:Q46820;db_xref=EcoGene:EG13070 EMBL gene 3031367 3032815 . + . ID=.6266;gene=uacT;locus_tag=b2888;gene_synonym=ECK2883;gene_synonym=JW5470;gene_synonym=ygfU;db_xref=EcoGene:EG13071 EMBL CDS 3031367 3032815 . + 0 ID=.6267;gene=uacT;locus_tag=b2888;gene_synonym=ECK2883;gene_synonym=JW5470;gene_synonym=ygfU;function=transport%3B Transport of small molecules: Nucleosides%2C purines%2C pyrimidines;note=putative permease%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=uric acid permease;protein_id=AAC75926.2;db_xref=GI:87082181;db_xref=ASAP:ABE-0009478;db_xref=UniProtKB/Swiss-Prot:Q46821;db_xref=EcoGene:EG13071 EMBL gene 3032817 3032942 . + . ID=.6268;gene=yqfG;locus_tag=b4684;gene_synonym=ECK4499;db_xref=EcoGene:EG14489 EMBL CDS 3032817 3032942 . + 0 ID=.6269;gene=yqfG;locus_tag=b4684;gene_synonym=ECK4499;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=ACO60006.1;db_xref=GI:226510972;db_xref=UniProtKB/Swiss-Prot:C1P614;db_xref=EcoGene:EG14489 EMBL gene 3033065 3033613 . + . ID=.6270;gene=idi;locus_tag=b2889;gene_synonym=ECK2884;gene_synonym=JW2857;gene_synonym=ygfV;db_xref=EcoGene:EG13072 EMBL CDS 3033065 3033613 . + 0 ID=.6271;gene=idi;locus_tag=b2889;gene_synonym=ECK2884;gene_synonym=JW2857;gene_synonym=ygfV;ec_number=5.3.3.2;function=putative enzyme%3B Not classified;note=GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=isopentenyl diphosphate isomerase;protein_id=AAC75927.1;db_xref=GI:1789255;db_xref=ASAP:ABE-0009484;db_xref=UniProtKB/Swiss-Prot:Q46822;db_xref=EcoGene:EG13072 EMBL gene 3033657 3035174 . - . ID=.6272;gene=lysS;locus_tag=b2890;gene_synonym=asuD;gene_synonym=ECK2885;gene_synonym=herC;gene_synonym=JW2858;db_xref=EcoGene:EG10552 EMBL CDS 3033657 3035174 . - 0 ID=.6273;gene=lysS;locus_tag=b2890;gene_synonym=asuD;gene_synonym=ECK2885;gene_synonym=herC;gene_synonym=JW2858;ec_number=6.1.1.6;function=enzyme%3B Aminoacyl tRNA synthetases%2C tRNA modification;note=lysine tRNA synthetase%2C constitutive%3B suppressor of ColE1 mutation in primer RNA%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006418 - tRNA aminoacylation for protein translation;codon_start=1;transl_table=11;product=lysine tRNA synthetase%2C constitutive;protein_id=AAC75928.1;db_xref=GI:1789256;db_xref=ASAP:ABE-0009486;db_xref=UniProtKB/Swiss-Prot:P0A8N3;db_xref=EcoGene:EG10552 EMBL gene 3035184 3036282 . - . ID=.6274;gene=prfB;locus_tag=b2891;gene_synonym=ECK2886;gene_synonym=JW5847;gene_synonym=supK;db_xref=EcoGene:EG10762 EMBL biological_region 3035184 3036282 . - 0 ID=.6275;featflags=type:CDS;gene=prfB;locus_tag=b2891;gene_synonym=ECK2886;gene_synonym=JW5847;gene_synonym=supK;function=factor%3B Proteins - translation and modification;experiment=N-terminus verified by Edman degradation: PMID 3889910;ribosomal_slippage=true;note=an in-frame premature UGA termination codon is located within the prfB sequence%2C and a naturally occuring +1 frameshift is required for synthesis of RF-2%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=peptide chain release factor RF-2;protein_id=AAC75929.1;db_xref=GI:2367172;db_xref=ASAP:ABE-0009488;db_xref=UniProtKB/Swiss-Prot:P07012;db_xref=EcoGene:EG10762 EMBL CDS 3035184 3036206 . - 0 Parent=.6275 EMBL CDS 3036208 3036282 . - 0 Parent=.6275 EMBL gene 3036373 3038106 . - . ID=.6278;gene=recJ;locus_tag=b2892;gene_synonym=ECK2887;gene_synonym=JW2860;db_xref=EcoGene:EG10830 EMBL CDS 3036373 3038106 . - 0 ID=.6279;gene=recJ;locus_tag=b2892;gene_synonym=ECK2887;gene_synonym=JW2860;ec_number=3.1.-.-;function=enzyme%3B Degradation of DNA;note=ssDNA exonuclease%2C 5' --> 3' specific%3B GO_process: GO:0006308 - DNA catabolic process;codon_start=1;transl_table=11;product=ssDNA exonuclease%2C 5' --> 3'-specific;protein_id=AAC75930.1;db_xref=GI:1789259;db_xref=ASAP:ABE-0009492;db_xref=UniProtKB/Swiss-Prot:P21893;db_xref=EcoGene:EG10830 EMBL gene 3038112 3038822 . - . ID=.6280;gene=dsbC;locus_tag=b2893;gene_synonym=ECK2888;gene_synonym=JW2861;gene_synonym=xprA;db_xref=EcoGene:EG11070 EMBL CDS 3038112 3038822 . - 0 ID=.6281;gene=dsbC;locus_tag=b2893;gene_synonym=ECK2888;gene_synonym=JW2861;gene_synonym=xprA;ec_number=5.3.4.1;function=enzyme%3B Surface structures;note=GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=protein disulfide isomerase II;protein_id=AAC75931.1;db_xref=GI:1789260;db_xref=ASAP:ABE-0009494;db_xref=UniProtKB/Swiss-Prot:P0AEG6;db_xref=EcoGene:EG11070 EMBL gene 3038847 3039743 . - . ID=.6282;gene=xerD;locus_tag=b2894;gene_synonym=ECK2889;gene_synonym=JW2862;gene_synonym=xprB;db_xref=EcoGene:EG11071 EMBL CDS 3038847 3039743 . - 0 ID=.6283;gene=xerD;locus_tag=b2894;gene_synonym=ECK2889;gene_synonym=JW2862;gene_synonym=xprB;function=enzyme%3B DNA - replication%2C repair%2C restriction/modification;experiment=N-terminus verified by Edman degradation: PMID 8402918;note=GO_process: GO:0006310 - DNA recombination;codon_start=1;transl_table=11;product=site-specific tyrosine recombinase;protein_id=AAC75932.1;db_xref=GI:1789261;db_xref=ASAP:ABE-0009500;db_xref=UniProtKB/Swiss-Prot:P0A8P8;db_xref=EcoGene:EG11071 EMBL gene 3039855 3040376 . + . ID=.6284;gene=fldB;locus_tag=b2895;gene_synonym=ECK2890;gene_synonym=JW2863;db_xref=EcoGene:EG12697 EMBL CDS 3039855 3040376 . + 0 ID=.6285;gene=fldB;locus_tag=b2895;gene_synonym=ECK2890;gene_synonym=JW2863;function=enzyme%3B Energy metabolism%2C carbon: Aerobic respiration;note=GO_function: GO:0009055 - electron carrier activity%3B GO_process: GO:0009060 - aerobic respiration;codon_start=1;transl_table=11;product=flavodoxin 2;protein_id=AAC75933.1;db_xref=GI:1789262;db_xref=ASAP:ABE-0009503;db_xref=UniProtKB/Swiss-Prot:P0ABY4;db_xref=EcoGene:EG12697 EMBL gene 3040416 3040823 . - . ID=.6286;gene=cptA;locus_tag=b2896;gene_synonym=ECK2891;gene_synonym=JW2864;gene_synonym=pigV;gene_synonym=ygfX;db_xref=EcoGene:EG13074 EMBL CDS 3040416 3040823 . - 0 ID=.6287;gene=cptA;locus_tag=b2896;gene_synonym=ECK2891;gene_synonym=JW2864;gene_synonym=pigV;gene_synonym=ygfX;codon_start=1;transl_table=11;product=toxin of CptAB toxin-antitoxin pair;protein_id=AAC75934.1;db_xref=GI:1789263;db_xref=ASAP:ABE-0009505;db_xref=UniProtKB/Swiss-Prot:Q46824;db_xref=EcoGene:EG13074 EMBL gene 3040804 3041070 . - . ID=.6288;gene=sdhE;locus_tag=b2897;gene_synonym=cptB;gene_synonym=ECK2892;gene_synonym=JW2865;gene_synonym=ygfY;db_xref=EcoGene:EG13075 EMBL CDS 3040804 3041070 . - 0 ID=.6289;gene=sdhE;locus_tag=b2897;gene_synonym=cptB;gene_synonym=ECK2892;gene_synonym=JW2865;gene_synonym=ygfY;function=factor%3B Energy metabolism%2C carbon: TCA cycle;codon_start=1;transl_table=11;product=flavinator of succinate dehydrogenase%3B antitoxin of CptAB toxin-antitoxin pair;protein_id=AAC75935.1;db_xref=GI:1789264;db_xref=ASAP:ABE-0009507;db_xref=UniProtKB/Swiss-Prot:P64559;db_xref=EcoGene:EG13075 EMBL gene 3041313 3042293 . + . ID=.6290;gene=ygfZ;locus_tag=b2898;gene_synonym=ECK2893;gene_synonym=JW2866;gene_synonym=yzzW;db_xref=EcoGene:EG12685 EMBL CDS 3041313 3042293 . + 0 ID=.6291;gene=ygfZ;locus_tag=b2898;gene_synonym=ECK2893;gene_synonym=JW2866;gene_synonym=yzzW;codon_start=1;transl_table=11;product=iron-sulfur cluster repair protein%2C plumbagin resistance;protein_id=AAC75936.1;db_xref=GI:1789265;db_xref=ASAP:ABE-0009512;db_xref=UniProtKB/Swiss-Prot:P0ADE8;db_xref=EcoGene:EG12685 EMBL repeat_region 3042321 3042475 . + . ID=.6292;note=REP210 (repetitive extragenic palindromic) element%3B contains 3 REP sequences EMBL gene 3042489 3043148 . - . ID=.6293;gene=yqfA;locus_tag=b2899;gene_synonym=ECK2894;gene_synonym=JW2867;db_xref=EcoGene:EG13077 EMBL CDS 3042489 3043148 . - 0 ID=.6294;gene=yqfA;locus_tag=b2899;gene_synonym=ECK2894;gene_synonym=JW2867;function=putative enzyme%3B Not classified;note=putative oxidoreductase%3B GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=hemolysin III family HylIII inner membrane protein;protein_id=AAC75937.1;db_xref=GI:1789266;db_xref=ASAP:ABE-0009515;db_xref=UniProtKB/Swiss-Prot:P67153;db_xref=EcoGene:EG13077 EMBL gene 3043312 3043623 . - . ID=.6295;gene=yqfB;locus_tag=b2900;gene_synonym=ECK2895;gene_synonym=JW2868;db_xref=EcoGene:EG13078 EMBL CDS 3043312 3043623 . - 0 ID=.6296;gene=yqfB;locus_tag=b2900;gene_synonym=ECK2895;gene_synonym=JW2868;codon_start=1;transl_table=11;product=UPF0267 family protein;protein_id=AAC75938.1;db_xref=GI:1789267;db_xref=ASAP:ABE-0009518;db_xref=UniProtKB/Swiss-Prot:P67603;db_xref=EcoGene:EG13078 EMBL gene 3043662 3045101 . + . ID=.6297;gene=bglA;locus_tag=b2901;gene_synonym=bglD;gene_synonym=ECK2896;gene_synonym=JW2869;gene_synonym=yqfC;db_xref=EcoGene:EG13079 EMBL CDS 3043662 3045101 . + 0 ID=.6298;gene=bglA;locus_tag=b2901;gene_synonym=bglD;gene_synonym=ECK2896;gene_synonym=JW2869;gene_synonym=yqfC;ec_number=3.2.1.86;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=6-phospho-beta-glucosidase A%3B cryptic%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=6-phospho-beta-glucosidase A;protein_id=AAC75939.1;db_xref=GI:2367174;db_xref=ASAP:ABE-0009523;db_xref=UniProtKB/Swiss-Prot:Q46829;db_xref=EcoGene:EG13079 EMBL repeat_region 3045113 3045140 . + . ID=.6299;note=REP211 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 3045158 3045901 . - . ID=.6300;gene=ygfF;locus_tag=b2902;gene_synonym=ECK2897;gene_synonym=JW2870;gene_synonym=yqfD;db_xref=EcoGene:EG12971 EMBL CDS 3045158 3045901 . - 0 ID=.6301;gene=ygfF;locus_tag=b2902;gene_synonym=ECK2897;gene_synonym=JW2870;gene_synonym=yqfD;function=putative enzyme%3B Not classified;note=putative oxidoreductase;codon_start=1;transl_table=11;product=putative NAD(P)-dependent oxidoreductase;protein_id=AAC75940.1;db_xref=GI:2367175;db_xref=ASAP:ABE-0009526;db_xref=UniProtKB/Swiss-Prot:P52037;db_xref=EcoGene:EG12971 EMBL gene 3046168 3049041 . - . ID=.6302;gene=gcvP;locus_tag=b2903;gene_synonym=ECK2898;gene_synonym=JW2871;db_xref=EcoGene:EG11810 EMBL CDS 3046168 3049041 . - 0 ID=.6303;gene=gcvP;locus_tag=b2903;gene_synonym=ECK2898;gene_synonym=JW2871;ec_number=1.4.4.2;function=enzyme%3B Central intermediary metabolism: Pool%2C multipurpose conversions;note=glycine decarboxylase%2C P protein of glycine cleavage system%3B GO_process: GO:0009063 - cellular amino acid catabolic process;codon_start=1;transl_table=11;product=glycine decarboxylase%2C PLP-dependent%2C subunit P of glycine cleavage complex;protein_id=AAC75941.1;db_xref=GI:1789269;db_xref=ASAP:ABE-0009531;db_xref=UniProtKB/Swiss-Prot:P33195;db_xref=EcoGene:EG11810 EMBL gene 3049160 3049549 . - . ID=.6304;gene=gcvH;locus_tag=b2904;gene_synonym=ECK2899;gene_synonym=JW2872;db_xref=EcoGene:EG10371 EMBL CDS 3049160 3049549 . - 0 ID=.6305;gene=gcvH;locus_tag=b2904;gene_synonym=ECK2899;gene_synonym=JW2872;function=carrier%3B Central intermediary metabolism: Pool%2C multipurpose conversions;note=in glycine cleavage complex%2C carrier of aminomethyl moiety via covalently bound lipoyl cofactor%3B GO_process: GO:0009063 - cellular amino acid catabolic process;codon_start=1;transl_table=11;product=glycine cleavage complex lipoylprotein;protein_id=AAC75942.1;db_xref=GI:1789271;db_xref=ASAP:ABE-0009534;db_xref=UniProtKB/Swiss-Prot:P0A6T9;db_xref=EcoGene:EG10371 EMBL gene 3049573 3050667 . - . ID=.6306;gene=gcvT;locus_tag=b2905;gene_synonym=ECK2900;gene_synonym=JW2873;db_xref=EcoGene:EG11442 EMBL CDS 3049573 3050667 . - 0 ID=.6307;gene=gcvT;locus_tag=b2905;gene_synonym=ECK2900;gene_synonym=JW2873;ec_number=2.1.2.10;function=enzyme%3B Central intermediary metabolism: Pool%2C multipurpose conversions;note=aminomethyltransferase (T protein%3B tetrahydrofolate-dependent) of glycine cleavage system%3B GO_process: GO:0009063 - cellular amino acid catabolic process;codon_start=1;transl_table=11;product=aminomethyltransferase%2C tetrahydrofolate-dependent%2C subunit (T protein) of glycine cleavage complex;protein_id=AAC75943.1;db_xref=GI:1789272;db_xref=ASAP:ABE-0009536;db_xref=UniProtKB/Swiss-Prot:P27248;db_xref=EcoGene:EG11442 EMBL gene 3051115 3052317 . - . ID=.6308;gene=ubiI;locus_tag=b2906;gene_synonym=ECK2901;gene_synonym=JW2874;gene_synonym=visC;db_xref=EcoGene:EG11333 EMBL CDS 3051115 3052317 . - 0 ID=.6309;gene=ubiI;locus_tag=b2906;gene_synonym=ECK2901;gene_synonym=JW2874;gene_synonym=visC;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Menaquinone%2C ubiquinone;codon_start=1;transl_table=11;product=2-octaprenylphenol hydroxylase%2C FAD-dependent;protein_id=AAC75944.1;db_xref=GI:1789273;db_xref=ASAP:ABE-0009543;db_xref=UniProtKB/Swiss-Prot:P25535;db_xref=EcoGene:EG11333 EMBL gene 3052340 3053518 . - . ID=.6310;gene=ubiH;locus_tag=b2907;gene_synonym=acd;gene_synonym=ECK2902;gene_synonym=JW2875;gene_synonym=visB;db_xref=EcoGene:EG11324 EMBL CDS 3052340 3053518 . - 0 ID=.6311;gene=ubiH;locus_tag=b2907;gene_synonym=acd;gene_synonym=ECK2902;gene_synonym=JW2875;gene_synonym=visB;ec_number=1.14.13.-;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Menaquinone%2C ubiquinone;note=2-octaprenyl-6-methoxyphenol--> 2-octaprenyl-6-methoxy-1%2C 4-benzoquinone%3B GO_process: GO:0009060 - aerobic respiration;codon_start=1;transl_table=11;product=2-octaprenyl-6-methoxyphenol hydroxylase%2C FAD/NAD(P)-binding;protein_id=AAC75945.1;db_xref=GI:1789274;db_xref=ASAP:ABE-0009545;db_xref=UniProtKB/Swiss-Prot:P25534;db_xref=EcoGene:EG11324 EMBL gene 3053515 3054840 . - . ID=.6312;gene=pepP;locus_tag=b2908;gene_synonym=ECK2903;gene_synonym=JW2876;db_xref=EcoGene:EG10697 EMBL CDS 3053515 3054840 . - 0 ID=.6313;gene=pepP;locus_tag=b2908;gene_synonym=ECK2903;gene_synonym=JW2876;ec_number=3.4.11.9;function=enzyme%3B Degradation of proteins%2C peptides%2C glyco;codon_start=1;transl_table=11;product=proline aminopeptidase P II;protein_id=AAC75946.1;db_xref=GI:1789275;db_xref=ASAP:ABE-0009549;db_xref=UniProtKB/Swiss-Prot:P15034;db_xref=EcoGene:EG10697 EMBL gene 3054866 3055444 . - . ID=.6314;gene=ygfB;locus_tag=b2909;gene_synonym=ECK2904;gene_synonym=JW5473;db_xref=EcoGene:EG11323 EMBL CDS 3054866 3055444 . - 0 ID=.6315;gene=ygfB;locus_tag=b2909;gene_synonym=ECK2904;gene_synonym=JW5473;codon_start=1;transl_table=11;product=UPF0149 family protein;protein_id=AAC75947.2;db_xref=GI:87082182;db_xref=ASAP:ABE-0009551;db_xref=UniProtKB/Swiss-Prot:P0A8C4;db_xref=EcoGene:EG11323 EMBL gene 3055612 3055941 . + . ID=.6316;gene=zapA;locus_tag=b2910;gene_synonym=ECK2905;gene_synonym=JW2878;gene_synonym=ygfE;db_xref=EcoGene:EG12878 EMBL CDS 3055612 3055941 . + 0 ID=.6317;gene=zapA;locus_tag=b2910;gene_synonym=ECK2905;gene_synonym=JW2878;gene_synonym=ygfE;codon_start=1;transl_table=11;product=FtsZ stabilizer;protein_id=AAC75948.1;db_xref=GI:1789277;db_xref=ASAP:ABE-0009554;db_xref=UniProtKB/Swiss-Prot:P0ADS2;db_xref=EcoGene:EG12878 EMBL gene 3055983 3056165 . + . ID=.6318;gene=ssrS;locus_tag=b2911;gene_synonym=ECK2906;gene_synonym=JWR0067;gene_synonym=ssr;gene_synonym=ssrI;db_xref=EcoGene:EG30099 EMBL ncRNA 3055983 3056165 . + . ID=.6319;ncrna_class=other;gene=ssrS;locus_tag=b2911;gene_synonym=ECK2906;gene_synonym=JWR0067;gene_synonym=ssr;gene_synonym=ssrI;product=6S RNA inhibits RNA polymerase promoter binding;note=template for RNA-directed pRNA synthesis by RNAP%3B mimics an open promoter;function=2.2.6 information transfer%3B RNA related%3B rRNA%2C stable RNA;function=7.1 location of gene products%3B cytoplasm;function=modulates promoter use via interaction with RNA polymerase;function=RNA%3B Ribosomal and stable RNAs;db_xref=ASAP:ABE-0009556;db_xref=EcoGene:EG30099 EMBL gene 3056241 3056789 . + . ID=.6320;gene=fau;locus_tag=b2912;gene_synonym=ECK2907;gene_synonym=JW2879;gene_synonym=ygfA;db_xref=EcoGene:EG11158 EMBL CDS 3056241 3056789 . + 0 ID=.6321;gene=fau;locus_tag=b2912;gene_synonym=ECK2907;gene_synonym=JW2879;gene_synonym=ygfA;function=putative enzyme%3B Not classified;note=putative ligase;codon_start=1;transl_table=11;product=5-formyltetrahydrofolate cyclo-ligase family protein;protein_id=AAC75949.1;db_xref=GI:1789278;db_xref=ASAP:ABE-0009559;db_xref=UniProtKB/Swiss-Prot:P0AC28;db_xref=EcoGene:EG11158 EMBL gene 3056849 3056988 . + . ID=.6322;gene=sibC;locus_tag=b4446;gene_synonym=ECK2908;gene_synonym=JWR0250;gene_synonym=QUAD1c;gene_synonym=rygC;gene_synonym=t27;db_xref=EcoGene:EG31159 EMBL ncRNA 3056849 3056988 . + . ID=.6323;ncrna_class=antisense_RNA;gene=sibC;locus_tag=b4446;gene_synonym=ECK2908;gene_synonym=JWR0250;gene_synonym=QUAD1c;gene_synonym=rygC;gene_synonym=t27;product=sRNA antisense regulator of toxic IbsC protein;note=identified in a large scale screen;db_xref=ASAP:ABE-0047266;db_xref=EcoGene:EG31159 EMBL gene 3056890 3056949 . - . ID=.6324;gene=ibsC;locus_tag=b4665;gene_synonym=ECK4480;db_xref=EcoGene:EG14470 EMBL CDS 3056890 3056949 . - 0 ID=.6325;gene=ibsC;locus_tag=b4665;gene_synonym=ECK4480;codon_start=1;transl_table=11;product=toxic membrane protein;protein_id=ACO60007.1;db_xref=GI:226510973;db_xref=UniProtKB/Swiss-Prot:C1P615;db_xref=EcoGene:EG14470 EMBL gene 3057178 3058410 . - . ID=.6326;gene=serA;locus_tag=b2913;gene_synonym=ECK2909;gene_synonym=JW2880;db_xref=EcoGene:EG10944 EMBL CDS 3057178 3058410 . - 0 ID=.6327;gene=serA;locus_tag=b2913;gene_synonym=ECK2909;gene_synonym=JW2880;ec_number=1.1.1.95;function=enzyme%3B Amino acid biosynthesis: Serine;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006564 - L-serine biosynthetic process;codon_start=1;transl_table=11;product=D-3-phosphoglycerate dehydrogenase;protein_id=AAC75950.1;db_xref=GI:1789279;db_xref=ASAP:ABE-0009561;db_xref=UniProtKB/Swiss-Prot:P0A9T0;db_xref=EcoGene:EG10944 EMBL gene 3058666 3059325 . - . ID=.6328;gene=rpiA;locus_tag=b2914;gene_synonym=ECK2910;gene_synonym=JW5475;gene_synonym=ygfC;db_xref=EcoGene:EG11443 EMBL CDS 3058666 3059325 . - 0 ID=.6329;gene=rpiA;locus_tag=b2914;gene_synonym=ECK2910;gene_synonym=JW5475;gene_synonym=ygfC;ec_number=5.3.1.6;function=enzyme%3B Central intermediary metabolism: Non-oxidative branch%2C pentose pathway;experiment=N-terminus verified by Edman degradation: PMID 8366047%2C9298646%2C9600841%2C9740056;note=ribosephosphate isomerase%2C constitutive%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0009052 - pentose-phosphate shunt%2C non-oxidative branch;codon_start=1;transl_table=11;product=ribose 5-phosphate isomerase%2C constitutive;protein_id=AAC75951.1;db_xref=GI:1789280;db_xref=ASAP:ABE-0009567;db_xref=UniProtKB/Swiss-Prot:P0A7Z0;db_xref=EcoGene:EG11443 EMBL gene 3059381 3059701 . - . ID=.6330;gene=yqfE;locus_tag=b2915;gene_synonym=ECK2911;gene_synonym=JW2882;pseudo=true;db_xref=EcoGene:EG13163 EMBL CDS 3059381 3059701 . - 0 ID=.6331;gene=yqfE;locus_tag=b2915;gene_synonym=ECK2911;gene_synonym=JW2882;note=pseudogene%2C LysR family;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0009570;db_xref=UniProtKB/Swiss-Prot:P64562;db_xref=EcoGene:EG13163 EMBL gene 3059753 3060646 . + . ID=.6332;gene=argP;locus_tag=b2916;gene_synonym=can;gene_synonym=canR;gene_synonym=ECK2912;gene_synonym=iciA;gene_synonym=JW2883;db_xref=EcoGene:EG10490 EMBL CDS 3059753 3060646 . + 0 ID=.6333;gene=argP;locus_tag=b2916;gene_synonym=can;gene_synonym=canR;gene_synonym=ECK2912;gene_synonym=iciA;gene_synonym=JW2883;function=regulator%3B DNA - replication%2C repair%2C restriction/modification;experiment=N-terminus verified by Edman degradation: PMID 2034653;note=replication initiation inhibitor%2C binds to 13-mers at oriC%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006261 - DNA-dependent DNA replication%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=transcriptional regulator for arginine transport and DNA replication genes%3B replication initiation inhibitor;protein_id=AAC75953.1;db_xref=GI:1789283;db_xref=ASAP:ABE-0009574;db_xref=UniProtKB/Swiss-Prot:P0A8S1;db_xref=EcoGene:EG10490 EMBL repeat_region 3060660 3060680 . + . ID=.6334;note=REP212 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 3060850 3062994 . + . ID=.6335;gene=scpA;locus_tag=b2917;gene_synonym=ECK2913;gene_synonym=JW2884;gene_synonym=mcm;gene_synonym=sbm;gene_synonym=yliK;db_xref=EcoGene:EG11444 EMBL CDS 3060850 3062994 . + 0 ID=.6336;gene=scpA;locus_tag=b2917;gene_synonym=ECK2913;gene_synonym=JW2884;gene_synonym=mcm;gene_synonym=sbm;gene_synonym=yliK;ec_number=5.4.99.2;function=enzyme%3B Degradation of small molecules: Fatty acids;note=methylmalonyl-CoA mutase (MCM)%3B GO_process: GO:0019395 - fatty acid oxidation;codon_start=1;transl_table=11;product=methylmalonyl-CoA mutase;protein_id=AAC75954.1;db_xref=GI:1789284;db_xref=ASAP:ABE-0009577;db_xref=UniProtKB/Swiss-Prot:P27253;db_xref=EcoGene:EG11444 EMBL gene 3062987 3063982 . + . ID=.6337;gene=argK;locus_tag=b2918;gene_synonym=ECK2914;gene_synonym=JW2885;gene_synonym=meaB;gene_synonym=scpK?;gene_synonym=ygfD;db_xref=EcoGene:EG11445 EMBL CDS 3062987 3063982 . + 0 ID=.6338;gene=argK;locus_tag=b2918;gene_synonym=ECK2914;gene_synonym=JW2885;gene_synonym=meaB;gene_synonym=scpK?;gene_synonym=ygfD;function=phenotype%3B Not classified;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=membrane ATPase/protein kinase;protein_id=AAC75955.1;db_xref=GI:1789285;db_xref=ASAP:ABE-0009579;db_xref=UniProtKB/Swiss-Prot:P27254;db_xref=EcoGene:EG11445 EMBL gene 3063993 3064778 . + . ID=.6339;gene=scpB;locus_tag=b2919;gene_synonym=ECK2915;gene_synonym=JW2886;gene_synonym=mmcD;gene_synonym=ygfG;db_xref=EcoGene:EG12972 EMBL CDS 3063993 3064778 . + 0 ID=.6340;gene=scpB;locus_tag=b2919;gene_synonym=ECK2915;gene_synonym=JW2886;gene_synonym=mmcD;gene_synonym=ygfG;ec_number=4.1.1.41;function=enzyme%3B Not classified;note=putative enzyme;codon_start=1;transl_table=11;product=methylmalonyl-CoA decarboxylase%2C biotin-independent;protein_id=AAC75956.2;db_xref=GI:87082183;db_xref=ASAP:ABE-0009581;db_xref=UniProtKB/Swiss-Prot:P52045;db_xref=EcoGene:EG12972 EMBL gene 3064802 3066280 . + . ID=.6341;gene=scpC;locus_tag=b2920;gene_synonym=ECK2916;gene_synonym=JW2887;gene_synonym=ygfH;db_xref=EcoGene:EG12973 EMBL CDS 3064802 3066280 . + 0 ID=.6342;gene=scpC;locus_tag=b2920;gene_synonym=ECK2916;gene_synonym=JW2887;gene_synonym=ygfH;ec_number=2.8.3.-;function=enzyme%3B Not classified;note=putative coenzyme A transferase;codon_start=1;transl_table=11;product=propionyl-CoA:succinate CoA transferase;protein_id=AAC75957.1;db_xref=GI:1789287;db_xref=ASAP:ABE-0009583;db_xref=UniProtKB/Swiss-Prot:P52043;db_xref=EcoGene:EG12973 EMBL gene 3066277 3067173 . - . ID=.6343;gene=ygfI;locus_tag=b2921;gene_synonym=ECK2917;gene_synonym=JW5476;db_xref=EcoGene:EG12974 EMBL CDS 3066277 3067173 . - 0 ID=.6344;gene=ygfI;locus_tag=b2921;gene_synonym=ECK2917;gene_synonym=JW5476;function=putative regulator%3B Not classified;note=putative transcriptional regulator LYSR-type%3B GO_function: GO:0016563 - transcription activator activity%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=putative DNA-binding transcriptional regulator;protein_id=AAC75958.2;db_xref=GI:87082184;db_xref=ASAP:ABE-0009585;db_xref=UniProtKB/Swiss-Prot:P52044;db_xref=EcoGene:EG12974 EMBL gene 3067340 3068080 . - . ID=.6345;gene=yggE;locus_tag=b2922;gene_synonym=ECK2918;gene_synonym=JW2889;db_xref=EcoGene:EG11244 EMBL CDS 3067340 3068080 . - 0 ID=.6346;gene=yggE;locus_tag=b2922;gene_synonym=ECK2918;gene_synonym=JW2889;function=phenotype%3B Not classified;note=putative actin;codon_start=1;transl_table=11;product=oxidative stress defense protein;protein_id=AAC75959.1;db_xref=GI:1789289;db_xref=ASAP:ABE-0009588;db_xref=UniProtKB/Swiss-Prot:P0ADS6;db_xref=EcoGene:EG11244 EMBL gene 3068173 3068808 . - . ID=.6347;gene=argO;locus_tag=b2923;gene_synonym=ECK2919;gene_synonym=JW2890;gene_synonym=yggA;db_xref=EcoGene:EG11159 EMBL CDS 3068173 3068808 . - 0 ID=.6348;gene=argO;locus_tag=b2923;gene_synonym=ECK2919;gene_synonym=JW2890;gene_synonym=yggA;codon_start=1;transl_table=11;product=arginine transporter;protein_id=AAC75960.1;db_xref=GI:1789290;db_xref=ASAP:ABE-0009591;db_xref=UniProtKB/Swiss-Prot:P11667;db_xref=EcoGene:EG11159 EMBL gene 3068947 3069807 . - . ID=.6349;gene=mscS;locus_tag=b2924;gene_synonym=ECK2920;gene_synonym=JW2891;gene_synonym=yggB;db_xref=EcoGene:EG11160 EMBL CDS 3068947 3069807 . - 0 ID=.6350;gene=mscS;locus_tag=b2924;gene_synonym=ECK2920;gene_synonym=JW2891;gene_synonym=yggB;function=transport%3B Transport of small molecules: Other;codon_start=1;transl_table=11;product=mechanosensitive channel protein%2C small conductance;protein_id=AAC75961.1;db_xref=GI:1789291;db_xref=ASAP:ABE-0009595;db_xref=UniProtKB/Swiss-Prot:P0C0S1;db_xref=EcoGene:EG11160 EMBL repeat_region 3070003 3070100 . + . ID=.6351;note=RIP213 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 3070165 3071244 . - . ID=.6352;gene=fbaA;locus_tag=b2925;gene_synonym=ald;gene_synonym=ECK2921;gene_synonym=fba;gene_synonym=fda;gene_synonym=JW2892;db_xref=EcoGene:EG10282 EMBL CDS 3070165 3071244 . - 0 ID=.6353;gene=fbaA;locus_tag=b2925;gene_synonym=ald;gene_synonym=ECK2921;gene_synonym=fba;gene_synonym=fda;gene_synonym=JW2892;ec_number=4.1.2.13;function=enzyme%3B Energy metabolism%2C carbon: Glycolysis;note=GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=fructose-bisphosphate aldolase%2C class II;protein_id=AAC75962.1;db_xref=GI:1789293;db_xref=ASAP:ABE-0009600;db_xref=UniProtKB/Swiss-Prot:P0AB71;db_xref=EcoGene:EG10282 EMBL gene 3071459 3072622 . - . ID=.6354;gene=pgk;locus_tag=b2926;gene_synonym=ECK2922;gene_synonym=JW2893;db_xref=EcoGene:EG10703 EMBL CDS 3071459 3072622 . - 0 ID=.6355;gene=pgk;locus_tag=b2926;gene_synonym=ECK2922;gene_synonym=JW2893;ec_number=2.7.2.3;function=enzyme%3B Energy metabolism%2C carbon: Glycolysis;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006096 - glycolysis%3B GO_process: GO:0006094 - gluconeogenesis;codon_start=1;transl_table=11;product=phosphoglycerate kinase;protein_id=AAC75963.1;db_xref=GI:1789294;db_xref=ASAP:ABE-0009605;db_xref=UniProtKB/Swiss-Prot:P0A799;db_xref=EcoGene:EG10703 EMBL gene 3072672 3073691 . - . ID=.6356;gene=epd;locus_tag=b2927;gene_synonym=ECK2923;gene_synonym=gapB;gene_synonym=JW2894;db_xref=EcoGene:EG10368 EMBL CDS 3072672 3073691 . - 0 ID=.6357;gene=epd;locus_tag=b2927;gene_synonym=ECK2923;gene_synonym=gapB;gene_synonym=JW2894;ec_number=1.2.1.9;function=enzyme%3B Central intermediary metabolism;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0008615 - pyridoxine biosynthetic process%3B GO_process: GO:0006094 - gluconeogenesis;codon_start=1;transl_table=11;product=D-erythrose 4-phosphate dehydrogenase;protein_id=AAC75964.1;db_xref=GI:1789295;db_xref=ASAP:ABE-0009607;db_xref=UniProtKB/Swiss-Prot:P0A9B6;db_xref=EcoGene:EG10368 EMBL gene 3073976 3074689 . - . ID=.6358;gene=yggC;locus_tag=b2928;gene_synonym=ECK2924;gene_synonym=JW2895;db_xref=EcoGene:EG11161 EMBL CDS 3073976 3074689 . - 0 ID=.6359;gene=yggC;locus_tag=b2928;gene_synonym=ECK2924;gene_synonym=JW2895;function=putative enzyme%3B Not classified;note=putative kinase;codon_start=1;transl_table=11;product=putative PanK family P-loop kinase;protein_id=AAC75965.1;db_xref=GI:1789296;db_xref=ASAP:ABE-0009610;db_xref=UniProtKB/Swiss-Prot:P11664;db_xref=EcoGene:EG11161 EMBL gene 3074686 3075195 . - . ID=.6360;gene=yggD;locus_tag=b2929;gene_synonym=ECK2925;gene_synonym=JW2896;db_xref=EcoGene:EG11162 EMBL CDS 3074686 3075195 . - 0 ID=.6361;gene=yggD;locus_tag=b2929;gene_synonym=ECK2925;gene_synonym=JW2896;function=putative regulator%3B Not classified;note=putative transcriptional regulator;codon_start=1;transl_table=11;product=MtlR family putative transcriptional repressor;protein_id=AAC75966.1;db_xref=GI:1789297;db_xref=ASAP:ABE-0009612;db_xref=UniProtKB/Swiss-Prot:P11663;db_xref=EcoGene:EG11162 EMBL gene 3075217 3076182 . - . ID=.6362;gene=yggF;locus_tag=b2930;gene_synonym=ECK2926;gene_synonym=JW2897;gene_synonym=yggK;db_xref=EcoGene:EG11245 EMBL CDS 3075217 3076182 . - 0 ID=.6363;gene=yggF;locus_tag=b2930;gene_synonym=ECK2926;gene_synonym=JW2897;gene_synonym=yggK;codon_start=1;transl_table=11;product=fructose 1%2C6 bisphosphatase isozyme;protein_id=AAC75967.1;db_xref=GI:1789298;db_xref=ASAP:ABE-0009615;db_xref=UniProtKB/Swiss-Prot:P21437;db_xref=EcoGene:EG11245 EMBL gene 3076179 3077456 . - . ID=.6364;gene=yggP;locus_tag=b4465;gene_synonym=ECK2927;gene_synonym=JW5477;db_xref=EcoGene:EG12976 EMBL CDS 3076179 3077456 . - 0 ID=.6365;gene=yggP;locus_tag=b4465;gene_synonym=ECK2927;gene_synonym=JW5477;codon_start=1;transl_table=11;product=putative Zn-binding dehydrogenase;protein_id=AAT48154.1;db_xref=GI:48994910;db_xref=ASAP:ABE-0174095;db_xref=UniProtKB/Swiss-Prot:P52048;db_xref=EcoGene:EG12976 EMBL gene 3077471 3078859 . - . ID=.6366;gene=cmtA;locus_tag=b2933;gene_synonym=ECK2928;gene_synonym=JW2900;db_xref=EcoGene:EG11792 EMBL CDS 3077471 3078859 . - 0 ID=.6367;gene=cmtA;locus_tag=b2933;gene_synonym=ECK2928;gene_synonym=JW2900;ec_number=2.7.1.69;function=enzyme%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=PTS system%2C mannitol-specific enzyme II component%2C cryptic%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=putative mannitol-specific PTS IIB and IIC components;protein_id=AAC75970.1;db_xref=GI:1789301;db_xref=ASAP:ABE-0009621;db_xref=UniProtKB/Swiss-Prot:P69826;db_xref=EcoGene:EG11792 EMBL gene 3078887 3079330 . - . ID=.6368;gene=cmtB;locus_tag=b2934;gene_synonym=ECK2929;gene_synonym=JW2901;gene_synonym=tolM;db_xref=EcoGene:EG11791 EMBL CDS 3078887 3079330 . - 0 ID=.6369;gene=cmtB;locus_tag=b2934;gene_synonym=ECK2929;gene_synonym=JW2901;gene_synonym=tolM;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=PTS system%2C mannitol-specific enzyme II component%2C cryptic%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=putative mannitol-specific enzyme IIA component of PTS;protein_id=AAC75971.1;db_xref=GI:1789302;db_xref=ASAP:ABE-0009623;db_xref=UniProtKB/Swiss-Prot:P69824;db_xref=EcoGene:EG11791 EMBL gene 3079644 3081635 . - . ID=.6370;gene=tktA;locus_tag=b2935;gene_synonym=ECK2930;gene_synonym=JW5478;gene_synonym=tkt;db_xref=EcoGene:EG11427 EMBL CDS 3079644 3081635 . - 0 ID=.6371;gene=tktA;locus_tag=b2935;gene_synonym=ECK2930;gene_synonym=JW5478;gene_synonym=tkt;ec_number=2.2.1.1;function=enzyme%3B Central intermediary metabolism: Non-oxidative branch%2C pentose pathway;experiment=N-terminus verified by Edman degradation: PMID 1537815;note=transketolase 1 isozyme%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0009052 - pentose-phosphate shunt%2C non-oxidative branch%3B GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion;codon_start=1;transl_table=11;product=transketolase 1%2C thiamine triphosphate-binding;protein_id=AAT48155.1;db_xref=GI:48994911;db_xref=ASAP:ABE-0009625;db_xref=UniProtKB/Swiss-Prot:P27302;db_xref=EcoGene:EG11427 EMBL gene 3081913 3082671 . + . ID=.6372;gene=loiP;locus_tag=b2936;gene_synonym=ECK2931;gene_synonym=JW2903;gene_synonym=yggG;db_xref=EcoGene:EG11291 EMBL CDS 3081913 3082671 . + 0 ID=.6373;gene=loiP;locus_tag=b2936;gene_synonym=ECK2931;gene_synonym=JW2903;gene_synonym=yggG;function=enzyme%3B Degradation of proteins%2C peptides%2C glycopeptides;codon_start=1;transl_table=11;product=Phe-Phe periplasmic metalloprotease%2C OM lipoprotein%3B low salt-inducible%3B Era-binding heat shock protein;protein_id=AAC75973.2;db_xref=GI:87082185;db_xref=ASAP:ABE-0009629;db_xref=UniProtKB/Swiss-Prot:P25894;db_xref=EcoGene:EG11291 EMBL repeat_region 3082690 3082836 . + . ID=.6374;note=REP214 (repetitive extragenic palindromic) element%3B contains 3 REP sequences EMBL gene 3082877 3083797 . - . ID=.6375;gene=speB;locus_tag=b2937;gene_synonym=ECK2932;gene_synonym=JW2904;db_xref=EcoGene:EG10960 EMBL CDS 3082877 3083797 . - 0 ID=.6376;gene=speB;locus_tag=b2937;gene_synonym=ECK2932;gene_synonym=JW2904;ec_number=3.5.3.11;function=enzyme%3B Central intermediary metabolism: Polyamine biosynthesis;note=GO_process: GO:0006596 - polyamine biosynthetic process;codon_start=1;transl_table=11;product=agmatinase;protein_id=AAC75974.1;db_xref=GI:1789306;db_xref=ASAP:ABE-0009632;db_xref=UniProtKB/Swiss-Prot:P60651;db_xref=EcoGene:EG10960 EMBL gene 3083935 3085911 . - . ID=.6377;gene=speA;locus_tag=b2938;gene_synonym=ECK2933;gene_synonym=JW2905;db_xref=EcoGene:EG10959 EMBL CDS 3083935 3085911 . - 0 ID=.6378;gene=speA;locus_tag=b2938;gene_synonym=ECK2933;gene_synonym=JW2905;ec_number=4.1.1.19;function=enzyme%3B Central intermediary metabolism: Polyamine biosynthesis;note=biosynthetic arginine decarboxylase%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0006596 - polyamine biosynthetic process;codon_start=1;transl_table=11;product=biosynthetic arginine decarboxylase%2C PLP-binding;protein_id=AAC75975.1;db_xref=GI:1789307;db_xref=ASAP:ABE-0009634;db_xref=UniProtKB/Swiss-Prot:P21170;db_xref=EcoGene:EG10959 EMBL gene 3085920 3086051 . - . ID=.6379;gene=yqgB;locus_tag=b2939;gene_synonym=ECK2934;gene_synonym=JW2906;db_xref=EcoGene:EG13164 EMBL CDS 3085920 3086051 . - 0 ID=.6380;gene=yqgB;locus_tag=b2939;gene_synonym=ECK2934;gene_synonym=JW2906;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC75976.2;db_xref=GI:145693178;db_xref=ASAP:ABE-0009638;db_xref=UniProtKB/Swiss-Prot:P64567;db_xref=EcoGene:EG13164 EMBL gene 3086187 3086402 . + . ID=.6381;gene=yqgC;locus_tag=b2940;gene_synonym=ECK2935;gene_synonym=JW2907;db_xref=EcoGene:EG13165 EMBL CDS 3086187 3086402 . + 0 ID=.6382;gene=yqgC;locus_tag=b2940;gene_synonym=ECK2935;gene_synonym=JW2907;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC75977.1;db_xref=GI:1789309;db_xref=ASAP:ABE-0009643;db_xref=UniProtKB/Swiss-Prot:P64570;db_xref=EcoGene:EG13165 EMBL gene 3086706 3087860 . + . ID=.6383;gene=metK;locus_tag=b2942;gene_synonym=ECK2937;gene_synonym=JW2909;gene_synonym=metX;db_xref=EcoGene:EG10589 EMBL CDS 3086706 3087860 . + 0 ID=.6384;gene=metK;locus_tag=b2942;gene_synonym=ECK2937;gene_synonym=JW2909;gene_synonym=metX;ec_number=2.5.1.6;function=enzyme%3B Central intermediary metabolism: Pool%2C multipurpose conversions;note=methionine adenosyltransferase 1 (AdoMet synthetase)%3B methyl and propylamine donor%2C corepressor of met genes%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006556 - S-adenosylmethionine biosynthetic process;codon_start=1;transl_table=11;product=S-adenosylmethionine synthetase;protein_id=AAC75979.1;db_xref=GI:1789311;db_xref=ASAP:ABE-0009650;db_xref=UniProtKB/Swiss-Prot:P0A817;db_xref=EcoGene:EG10589 EMBL repeat_region 3087912 3087937 . + . ID=.6385;note=REP215 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 3088284 3089678 . + . ID=.6386;gene=galP;locus_tag=b2943;gene_synonym=ECK2938;gene_synonym=JW2910;gene_synonym=Pgal;db_xref=EcoGene:EG12148 EMBL CDS 3088284 3089678 . + 0 ID=.6387;gene=galP;locus_tag=b2943;gene_synonym=ECK2938;gene_synonym=JW2910;gene_synonym=Pgal;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=galactose-proton symport of transport system%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=D-galactose transporter;protein_id=AAC75980.1;db_xref=GI:1789312;db_xref=ASAP:ABE-0009654;db_xref=UniProtKB/Swiss-Prot:P0AEP1;db_xref=EcoGene:EG12148 EMBL gene 3089755 3090252 . + . ID=.6388;gene=yggI;locus_tag=b2944;gene_synonym=ECK2939;gene_synonym=JW2911;gene_synonym=sprT;db_xref=EcoGene:EG12122 EMBL CDS 3089755 3090252 . + 0 ID=.6389;gene=yggI;locus_tag=b2944;gene_synonym=ECK2939;gene_synonym=JW2911;gene_synonym=sprT;codon_start=1;transl_table=11;product=Zn-dependent metalloprotease-related protein;protein_id=AAC75981.1;db_xref=GI:1789313;db_xref=ASAP:ABE-0009657;db_xref=UniProtKB/Swiss-Prot:P39902;db_xref=EcoGene:EG12122 EMBL gene 3090347 3091054 . + . ID=.6390;gene=endA;locus_tag=b2945;gene_synonym=ECK2940;gene_synonym=JW2912;db_xref=EcoGene:EG11336 EMBL CDS 3090347 3091054 . + 0 ID=.6391;gene=endA;locus_tag=b2945;gene_synonym=ECK2940;gene_synonym=JW2912;ec_number=3.1.21.1;function=enzyme%3B Degradation of DNA;note=GO_process: GO:0006308 - DNA catabolic process;codon_start=1;transl_table=11;product=DNA-specific endonuclease I;protein_id=AAC75982.1;db_xref=GI:1789314;db_xref=ASAP:ABE-0009661;db_xref=UniProtKB/Swiss-Prot:P25736;db_xref=EcoGene:EG11336 EMBL gene 3091134 3091865 . + . ID=.6392;gene=rsmE;locus_tag=b2946;gene_synonym=ECK2941;gene_synonym=JW2913;gene_synonym=yggJ;db_xref=EcoGene:EG12366 EMBL CDS 3091134 3091865 . + 0 ID=.6393;gene=rsmE;locus_tag=b2946;gene_synonym=ECK2941;gene_synonym=JW2913;gene_synonym=yggJ;function=enzyme%3B rRNA modification;codon_start=1;transl_table=11;product=16S rRNA m(3)U1498 methyltransferase%2C SAM-dependent;protein_id=AAC75983.2;db_xref=GI:87082186;db_xref=ASAP:ABE-0009665;db_xref=UniProtKB/Swiss-Prot:P0AGL7;db_xref=EcoGene:EG12366 EMBL gene 3091878 3092828 . + . ID=.6394;gene=gshB;locus_tag=b2947;gene_synonym=ECK2942;gene_synonym=gsh-II;gene_synonym=JW2914;db_xref=EcoGene:EG10419 EMBL CDS 3091878 3092828 . + 0 ID=.6395;gene=gshB;locus_tag=b2947;gene_synonym=ECK2942;gene_synonym=gsh-II;gene_synonym=JW2914;ec_number=6.3.2.3;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Thioredoxin%2C glutaredoxin%2C glutathione;experiment=N-terminus verified by Edman degradation: PMID 6393055;note=GO_process: GO:0006750 - glutathione biosynthetic process;codon_start=1;transl_table=11;product=glutathione synthetase;protein_id=AAC75984.1;db_xref=GI:1789316;db_xref=ASAP:ABE-0009667;db_xref=UniProtKB/Swiss-Prot:P04425;db_xref=EcoGene:EG10419 EMBL gene 3092937 3093500 . + . ID=.6396;gene=yqgE;locus_tag=b2948;gene_synonym=ECK2943;gene_synonym=JW2915;db_xref=EcoGene:EG13289 EMBL CDS 3092937 3093500 . + 0 ID=.6397;gene=yqgE;locus_tag=b2948;gene_synonym=ECK2943;gene_synonym=JW2915;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC75985.2;db_xref=GI:87082187;db_xref=ASAP:ABE-0009669;db_xref=UniProtKB/Swiss-Prot:P0A8W5;db_xref=EcoGene:EG13289 EMBL gene 3093500 3093916 . + . ID=.6398;gene=yqgF;locus_tag=b2949;gene_synonym=ECK2944;gene_synonym=JW2916;db_xref=EcoGene:EG13290 EMBL CDS 3093500 3093916 . + 0 ID=.6399;gene=yqgF;locus_tag=b2949;gene_synonym=ECK2944;gene_synonym=JW2916;codon_start=1;transl_table=11;product=putative Holliday junction resolvase;protein_id=AAC75986.1;db_xref=GI:1789318;db_xref=ASAP:ABE-0009672;db_xref=UniProtKB/Swiss-Prot:P0A8I1;db_xref=EcoGene:EG13290 EMBL repeat_region 3093966 3094090 . + . ID=.6400;note=REP216 (repetitive extragenic palindromic) element%3B contains 3 REP sequences EMBL gene 3094100 3095080 . - . ID=.6401;gene=yggR;locus_tag=b2950;gene_synonym=ECK2945;gene_synonym=JW2917;db_xref=EcoGene:EG12978 EMBL CDS 3094100 3095080 . - 0 ID=.6402;gene=yggR;locus_tag=b2950;gene_synonym=ECK2945;gene_synonym=JW2917;function=putative transport%3B Not classified;note=putative protein transport;codon_start=1;transl_table=11;product=putative PilT family AAA+ ATPase;protein_id=AAC75987.2;db_xref=GI:87082188;db_xref=ASAP:ABE-0009675;db_xref=UniProtKB/Swiss-Prot:P52052;db_xref=EcoGene:EG12978 EMBL gene 3095098 3095802 . + . ID=.6403;gene=yggS;locus_tag=b2951;gene_synonym=ECK2946;gene_synonym=JW2918;db_xref=EcoGene:EG12979 EMBL CDS 3095098 3095802 . + 0 ID=.6404;gene=yggS;locus_tag=b2951;gene_synonym=ECK2946;gene_synonym=JW2918;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=UPF0001 family protein%2C PLP-binding;protein_id=AAC75988.1;db_xref=GI:1789321;db_xref=ASAP:ABE-0009681;db_xref=UniProtKB/Swiss-Prot:P67080;db_xref=EcoGene:EG12979 EMBL gene 3095820 3096386 . + . ID=.6405;gene=yggT;locus_tag=b2952;gene_synonym=ECK2947;gene_synonym=JW2919;db_xref=EcoGene:EG12980 EMBL CDS 3095820 3096386 . + 0 ID=.6406;gene=yggT;locus_tag=b2952;gene_synonym=ECK2947;gene_synonym=JW2919;note=conserved hypothetical integral membrane protein;codon_start=1;transl_table=11;product=putative inner membrane protein%3B compensates for loss in K+ uptake;protein_id=AAC75989.1;db_xref=GI:1789322;db_xref=ASAP:ABE-0009685;db_xref=UniProtKB/Swiss-Prot:P64564;db_xref=EcoGene:EG12980 EMBL gene 3096383 3096673 . + . ID=.6407;gene=yggU;locus_tag=b2953;gene_synonym=ECK2948;gene_synonym=JW5479;db_xref=EcoGene:EG12981 EMBL CDS 3096383 3096673 . + 0 ID=.6408;gene=yggU;locus_tag=b2953;gene_synonym=ECK2948;gene_synonym=JW5479;codon_start=1;transl_table=11;product=UPF0235 family protein;protein_id=AAC75990.2;db_xref=GI:87082189;db_xref=ASAP:ABE-0009690;db_xref=UniProtKB/Swiss-Prot:P52060;db_xref=EcoGene:EG12981 EMBL gene 3096681 3097274 . + . ID=.6409;gene=rdgB;locus_tag=b2954;gene_synonym=ECK2949;gene_synonym=JW2921;gene_synonym=yggV;db_xref=EcoGene:EG12982 EMBL CDS 3096681 3097274 . + 0 ID=.6410;gene=rdgB;locus_tag=b2954;gene_synonym=ECK2949;gene_synonym=JW2921;gene_synonym=yggV;ec_number=3.6.1.-;function=enzyme%3B Not classified;note=putative ribosomal protein;codon_start=1;transl_table=11;product=dITP/XTP pyrophosphatase;protein_id=AAC75991.1;db_xref=GI:1789324;db_xref=ASAP:ABE-0009692;db_xref=UniProtKB/Swiss-Prot:P52061;db_xref=EcoGene:EG12982 EMBL gene 3097267 3098403 . + . ID=.6411;gene=yggW;locus_tag=b2955;gene_synonym=ECK2950;gene_synonym=JW2922;db_xref=EcoGene:EG12983 EMBL CDS 3097267 3098403 . + 0 ID=.6412;gene=yggW;locus_tag=b2955;gene_synonym=ECK2950;gene_synonym=JW2922;function=putative enzyme%3B Not classified;note=putative oxidase;codon_start=1;transl_table=11;product=HemN family putative oxidoreductase;protein_id=AAC75992.1;db_xref=GI:1789325;db_xref=ASAP:ABE-0009694;db_xref=UniProtKB/Swiss-Prot:P52062;db_xref=EcoGene:EG12983 EMBL repeat_region 3098413 3098533 . + . ID=.6413;note=REP217 (repetitive extragenic palindromic) element%3B contains 3 REP sequences EMBL gene 3098558 3099565 . - . ID=.6414;gene=yggM;locus_tag=b2956;gene_synonym=ECK2951;gene_synonym=JW2923;db_xref=EcoGene:EG12704 EMBL CDS 3098558 3099565 . - 0 ID=.6415;gene=yggM;locus_tag=b2956;gene_synonym=ECK2951;gene_synonym=JW2923;function=phenotype%3B Not classified;note=putative alpha helix chain;codon_start=1;transl_table=11;product=DUF1202 family putative secreted protein;protein_id=AAC75993.1;db_xref=GI:1789326;db_xref=ASAP:ABE-0009697;db_xref=UniProtKB/Swiss-Prot:P46142;db_xref=EcoGene:EG12704 EMBL gene 3099682 3100728 . - . ID=.6416;gene=ansB;locus_tag=b2957;gene_synonym=ECK2952;gene_synonym=JW2924;db_xref=EcoGene:EG10046 EMBL CDS 3099682 3100728 . - 0 ID=.6417;gene=ansB;locus_tag=b2957;gene_synonym=ECK2952;gene_synonym=JW2924;ec_number=3.5.1.1;function=enzyme%3B Degradation of small molecules: Amino acids;note=GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0009063 - cellular amino acid catabolic process;codon_start=1;transl_table=11;product=periplasmic L-asparaginase 2;protein_id=AAC75994.1;db_xref=GI:1789327;db_xref=ASAP:ABE-0009700;db_xref=UniProtKB/Swiss-Prot:P00805;db_xref=EcoGene:EG10046 EMBL gene 3100904 3101623 . - . ID=.6418;gene=yggN;locus_tag=b2958;gene_synonym=ecfF;gene_synonym=ECK2953;gene_synonym=JW2925;db_xref=EcoGene:EG12705 EMBL CDS 3100904 3101623 . - 0 ID=.6419;gene=yggN;locus_tag=b2958;gene_synonym=ecfF;gene_synonym=ECK2953;gene_synonym=JW2925;codon_start=1;transl_table=11;product=DUF2884 family putative periplasmic protein;protein_id=AAC75995.1;db_xref=GI:1789328;db_xref=ASAP:ABE-0009706;db_xref=UniProtKB/Swiss-Prot:P0ADS9;db_xref=EcoGene:EG12705 EMBL repeat_region 3101696 3101774 . + . ID=.6420;note=REP218 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 3101807 3102133 . - . ID=.6421;gene=yggL;locus_tag=b2959;gene_synonym=ECK2954;gene_synonym=JW2926;db_xref=EcoGene:EG12443 EMBL CDS 3101807 3102133 . - 0 ID=.6422;gene=yggL;locus_tag=b2959;gene_synonym=ECK2954;gene_synonym=JW2926;codon_start=1;transl_table=11;product=DUF469 family protein;protein_id=AAC75996.2;db_xref=GI:87082190;db_xref=ASAP:ABE-0009712;db_xref=UniProtKB/Swiss-Prot:P38521;db_xref=EcoGene:EG12443 EMBL gene 3102133 3102852 . - . ID=.6423;gene=trmI;locus_tag=b2960;gene_synonym=ECK2955;gene_synonym=JW2927;gene_synonym=trmB?;gene_synonym=yggH;db_xref=EcoGene:EG11779 EMBL CDS 3102133 3102852 . - 0 ID=.6424;gene=trmI;locus_tag=b2960;gene_synonym=ECK2955;gene_synonym=JW2927;gene_synonym=trmB?;gene_synonym=yggH;ec_number=2.1.1.33;function=enzyme%3B tRNA modification;codon_start=1;transl_table=11;product=tRNA m(7)G46 methyltransferase%2C SAM-dependent;protein_id=AAC75997.1;db_xref=GI:1789330;db_xref=ASAP:ABE-0009714;db_xref=UniProtKB/Swiss-Prot:P0A8I5;db_xref=EcoGene:EG11779 EMBL gene 3103013 3104065 . + . ID=.6425;gene=mutY;locus_tag=b2961;gene_synonym=ECK2956;gene_synonym=JW2928;gene_synonym=micA;gene_synonym=mutB;db_xref=EcoGene:EG10627 EMBL CDS 3103013 3104065 . + 0 ID=.6426;gene=mutY;locus_tag=b2961;gene_synonym=ECK2956;gene_synonym=JW2928;gene_synonym=micA;gene_synonym=mutB;ec_number=3.2.2.-;function=enzyme%3B DNA - replication%2C repair%2C restriction/modification;note=adenine glycosylase%3B G.C --> T.A transversions%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006281 - DNA repair;codon_start=1;transl_table=11;product=adenine DNA glycosylase;protein_id=AAC75998.1;db_xref=GI:1789331;db_xref=ASAP:ABE-0009720;db_xref=UniProtKB/Swiss-Prot:P17802;db_xref=EcoGene:EG10627 EMBL gene 3104093 3104368 . + . ID=.6427;gene=yggX;locus_tag=b2962;gene_synonym=ECK2957;gene_synonym=JW2929;db_xref=EcoGene:EG12984 EMBL CDS 3104093 3104368 . + 0 ID=.6428;gene=yggX;locus_tag=b2962;gene_synonym=ECK2957;gene_synonym=JW2929;codon_start=1;transl_table=11;product=oxidative damage protective factor for iron-sulfur proteins;protein_id=AAC75999.1;db_xref=GI:1789332;db_xref=ASAP:ABE-0009722;db_xref=UniProtKB/Swiss-Prot:P0A8P3;db_xref=EcoGene:EG12984 EMBL gene 3104433 3105512 . + . ID=.6429;gene=mltC;locus_tag=b2963;gene_synonym=ECK2958;gene_synonym=JW5481;gene_synonym=yggZ;db_xref=EcoGene:EG12986 EMBL CDS 3104433 3105512 . + 0 ID=.6430;gene=mltC;locus_tag=b2963;gene_synonym=ECK2958;gene_synonym=JW5481;gene_synonym=yggZ;ec_number=3.2.1.-;function=putative enzyme%3B Murein sacculus%2C peptidoglycan;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009252 - peptidoglycan biosynthetic process;codon_start=1;transl_table=11;product=membrane-bound lytic murein transglycosylase C;protein_id=AAC76000.2;db_xref=GI:87082191;db_xref=ASAP:ABE-0009725;db_xref=UniProtKB/Swiss-Prot:P0C066;db_xref=EcoGene:EG12986 EMBL gene 3105714 3106970 . + . ID=.6431;gene=nupG;locus_tag=b2964;gene_synonym=ECK2959;gene_synonym=JW2932;db_xref=EcoGene:EG10664 EMBL CDS 3105714 3106970 . + 0 ID=.6432;gene=nupG;locus_tag=b2964;gene_synonym=ECK2959;gene_synonym=JW2932;function=transport%3B Transport of small molecules: Nucleosides%2C purines%2C pyrimidines;note=transport of nucleosides%2C permease protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion;codon_start=1;transl_table=11;product=nucleoside transporter;protein_id=AAC76001.2;db_xref=GI:87082192;db_xref=ASAP:ABE-0009728;db_xref=UniProtKB/Swiss-Prot:P0AFF4;db_xref=EcoGene:EG10664 EMBL gene 3107020 3109155 . - . ID=.6433;gene=speC;locus_tag=b2965;gene_synonym=ECK2960;gene_synonym=JW5482;db_xref=EcoGene:EG10961 EMBL CDS 3107020 3109155 . - 0 ID=.6434;gene=speC;locus_tag=b2965;gene_synonym=ECK2960;gene_synonym=JW5482;ec_number=4.1.1.17;function=enzyme%3B Central intermediary metabolism: Polyamine biosynthesis;note=ornithine decarboxylase isozyme%3B GO_process: GO:0006596 - polyamine biosynthetic process;codon_start=1;transl_table=11;product=ornithine decarboxylase%2C constitutive;protein_id=AAC76002.2;db_xref=GI:87082193;db_xref=ASAP:ABE-0009730;db_xref=UniProtKB/Swiss-Prot:P21169;db_xref=EcoGene:EG10961 EMBL gene 3109553 3110260 . + . ID=.6435;gene=yqgA;locus_tag=b2966;gene_synonym=ECK2961;gene_synonym=JW2934;db_xref=EcoGene:EG12987 EMBL CDS 3109553 3110260 . + 0 ID=.6436;gene=yqgA;locus_tag=b2966;gene_synonym=ECK2961;gene_synonym=JW2934;function=putative transport%3B Not classified;note=putative transport protein;codon_start=1;transl_table=11;product=DUF554 family putative inner membrane protein;protein_id=AAC76003.1;db_xref=GI:1789338;db_xref=ASAP:ABE-0009736;db_xref=UniProtKB/Swiss-Prot:Q46831;db_xref=EcoGene:EG12987 EMBL gene 3110366 3110441 . + . ID=.6437;gene=pheV;locus_tag=b2967;gene_synonym=ECK2962;gene_synonym=JWR0068;gene_synonym=pheC;db_xref=EcoGene:EG30065 EMBL tRNA 3110366 3110441 . + . ID=.6438;gene=pheV;locus_tag=b2967;gene_synonym=ECK2962;gene_synonym=JWR0068;gene_synonym=pheC;product=tRNA-Phe;note=anticodon: GAA;db_xref=ASAP:ABE-0009738;db_xref=EcoGene:EG30065 EMBL gene 3110590 3111126 . - . ID=.6439;gene=yghD;locus_tag=b2968;gene_synonym=ecfC;gene_synonym=ECK2963;gene_synonym=gspMbeta;gene_synonym=JW2935;db_xref=EcoGene:EG12988 EMBL CDS 3110590 3111126 . - 0 ID=.6440;gene=yghD;locus_tag=b2968;gene_synonym=ecfC;gene_synonym=ECK2963;gene_synonym=gspMbeta;gene_synonym=JW2935;function=putative transport%3B Not classified;note=putative secretion pathway protein;codon_start=1;transl_table=11;product=putative membrane-anchored secretion pathway M-type protein;protein_id=AAC76004.1;db_xref=GI:1789339;db_xref=ASAP:ABE-0009740;db_xref=UniProtKB/Swiss-Prot:Q46832;db_xref=EcoGene:EG12988 EMBL gene 3111128 3112090 . - . ID=.6441;gene=yghE;locus_tag=b2969;gene_synonym=ecfB;gene_synonym=ECK2964;gene_synonym=gspLbeta;gene_synonym=JW5924;pseudo=true;db_xref=EcoGene:EG12989 EMBL CDS 3111128 3112090 . - 0 ID=.6442;gene=yghE;locus_tag=b2969;gene_synonym=ecfB;gene_synonym=ECK2964;gene_synonym=gspLbeta;gene_synonym=JW5924;note=pseudogene%2C secretion pathway protein%2C L-type protein homology%3B putative general secretion pathway for protein export (GSP);pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0009742;db_xref=UniProtKB/Swiss-Prot:Q46833;db_xref=EcoGene:EG12989 EMBL gene 3112093 3112941 . - . ID=.6443;gene=yghF;locus_tag=b2970;gene_synonym=ecfA;gene_synonym=ECK2965;gene_synonym=gspCbeta;gene_synonym=JW5484;pseudo=true;db_xref=EcoGene:EG12990 EMBL CDS 3112093 3112941 . - 0 ID=.6444;gene=yghF;locus_tag=b2970;gene_synonym=ecfA;gene_synonym=ECK2965;gene_synonym=gspCbeta;gene_synonym=JW5484;note=pseudogene%2C secretion pathway protein%2C C-type protein homology%3Bputative transport%3B Not classified%3B putative general secretion pathway for protein export (GSP);pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0009745;db_xref=UniProtKB/Swiss-Prot:Q46834;db_xref=EcoGene:EG12990 EMBL gene 3113067 3113477 . - . ID=.6445;gene=yghG;locus_tag=b2971;gene_synonym=ECK2966;gene_synonym=gspSbeta;gene_synonym=JW2938;db_xref=EcoGene:EG12991 EMBL CDS 3113067 3113477 . - 0 ID=.6446;gene=yghG;locus_tag=b2971;gene_synonym=ECK2966;gene_synonym=gspSbeta;gene_synonym=JW2938;codon_start=1;transl_table=11;product=secretin (GspDbeta) OM localization lipoprotein pilotin;protein_id=AAC76007.1;db_xref=GI:1789342;db_xref=ASAP:ABE-0009748;db_xref=UniProtKB/Swiss-Prot:Q46835;db_xref=EcoGene:EG12991 EMBL gene 3113543 3114352 . - . ID=.6447;gene=pppA;locus_tag=b2972;gene_synonym=ECK2967;gene_synonym=JW2939;gene_synonym=yghH;db_xref=EcoGene:EG12992 EMBL CDS 3113543 3114352 . - 0 ID=.6448;gene=pppA;locus_tag=b2972;gene_synonym=ECK2967;gene_synonym=JW2939;gene_synonym=yghH;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=bifunctional prepilin leader peptidase/ methylase;protein_id=AAC76008.2;db_xref=GI:87082194;db_xref=ASAP:ABE-0009751;db_xref=UniProtKB/Swiss-Prot:Q46836;db_xref=EcoGene:EG12992 EMBL repeat_region 3114378 3114545 . + . ID=.6449;note=REP219 (repetitive extragenic palindromic) element%3B contains 3 REP sequences EMBL gene 3114550 3119112 . - . ID=.6450;gene=sslE;locus_tag=b4466;gene_synonym=acfD;gene_synonym=ECK2968;gene_synonym=JW5925;gene_synonym=yghJ;db_xref=EcoGene:EG12994 EMBL CDS 3114550 3119112 . - 0 ID=.6451;gene=sslE;locus_tag=b4466;gene_synonym=acfD;gene_synonym=ECK2968;gene_synonym=JW5925;gene_synonym=yghJ;note=putative lipoprotein;codon_start=1;transl_table=11;product=putative secreted and surface-associated lipoprotein mucinase;protein_id=AAT48156.1;db_xref=GI:48994912;db_xref=ASAP:ABE-0174096;db_xref=UniProtKB/Swiss-Prot:P0CK95;db_xref=EcoGene:EG12994 EMBL repeat_region 3119561 3119587 . + . ID=.6452;note=REP220 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 3119597 3121279 . - . ID=.6453;gene=glcA;locus_tag=b2975;gene_synonym=ECK2969;gene_synonym=JW2942;gene_synonym=yghK;db_xref=EcoGene:EG12995 EMBL CDS 3119597 3121279 . - 0 ID=.6454;gene=glcA;locus_tag=b2975;gene_synonym=ECK2969;gene_synonym=JW2942;gene_synonym=yghK;function=putative transport%3B Not classified;note=putative permease%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=glycolate transporter;protein_id=AAC76011.1;db_xref=GI:1789347;db_xref=ASAP:ABE-0009763;db_xref=UniProtKB/Swiss-Prot:Q46839;db_xref=EcoGene:EG12995 EMBL gene 3121634 3123805 . - . ID=.6455;gene=glcB;locus_tag=b2976;gene_synonym=ECK2970;gene_synonym=glc;gene_synonym=JW2943;db_xref=EcoGene:EG20080 EMBL CDS 3121634 3123805 . - 0 ID=.6456;gene=glcB;locus_tag=b2976;gene_synonym=ECK2970;gene_synonym=glc;gene_synonym=JW2943;ec_number=2.3.3.9;function=enzyme%3B Central intermediary metabolism: Glyoxylate bypass;note=GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0009436 - glyoxylate catabolic process;codon_start=1;transl_table=11;product=malate synthase G;protein_id=AAC76012.1;db_xref=GI:1789348;db_xref=ASAP:ABE-0009767;db_xref=UniProtKB/Swiss-Prot:P37330;db_xref=EcoGene:EG20080 EMBL gene 3123827 3124231 . - . ID=.6457;gene=glcG;locus_tag=b2977;gene_synonym=ECK2971;gene_synonym=JW2944;gene_synonym=yghC;db_xref=EcoGene:EG12952 EMBL CDS 3123827 3124231 . - 0 ID=.6458;gene=glcG;locus_tag=b2977;gene_synonym=ECK2971;gene_synonym=JW2944;gene_synonym=yghC;codon_start=1;transl_table=11;product=DUF336 family protein;protein_id=AAC76013.1;db_xref=GI:1789349;db_xref=ASAP:ABE-0009769;db_xref=UniProtKB/Swiss-Prot:P0AEQ1;db_xref=EcoGene:EG12952 EMBL gene 3124236 3125459 . - . ID=.6459;gene=glcF;locus_tag=b4467;gene_synonym=ECK2972;gene_synonym=gox;gene_synonym=JW5486;gene_synonym=yghL;db_xref=EcoGene:EG13291 EMBL CDS 3124236 3125459 . - 0 ID=.6460;gene=glcF;locus_tag=b4467;gene_synonym=ECK2972;gene_synonym=gox;gene_synonym=JW5486;gene_synonym=yghL;function=enzyme%3B Central intermediary metabolism: Pool%2C multipurpose conversions;codon_start=1;transl_table=11;product=glycolate oxidase 4Fe-4S iron-sulfur cluster subunit;protein_id=AAT48157.1;db_xref=GI:48994913;db_xref=ASAP:ABE-0174097;db_xref=UniProtKB/Swiss-Prot:P52074;db_xref=EcoGene:EG13291 EMBL gene 3125470 3126522 . - . ID=.6461;gene=glcE;locus_tag=b4468;gene_synonym=ECK2973;gene_synonym=gox;gene_synonym=JW5487;gene_synonym=yghL;db_xref=EcoGene:EG12996 EMBL CDS 3125470 3126522 . - 0 ID=.6462;gene=glcE;locus_tag=b4468;gene_synonym=ECK2973;gene_synonym=gox;gene_synonym=JW5487;gene_synonym=yghL;function=enzyme%3B Central intermediary metabolism: Pool%2C multipurpose conversions;note=glycolate oxidase iron-sulfur subunit;codon_start=1;transl_table=11;product=glycolate oxidase FAD binding subunit;protein_id=AAT48158.1;db_xref=GI:48994914;db_xref=ASAP:ABE-0174098;db_xref=UniProtKB/Swiss-Prot:P52073;db_xref=EcoGene:EG12996 EMBL gene 3126522 3128021 . - . ID=.6463;gene=glcD;locus_tag=b2979;gene_synonym=ECK2974;gene_synonym=gox;gene_synonym=JW2946;gene_synonym=yghM;db_xref=EcoGene:EG12997 EMBL CDS 3126522 3128021 . - 0 ID=.6464;gene=glcD;locus_tag=b2979;gene_synonym=ECK2974;gene_synonym=gox;gene_synonym=JW2946;gene_synonym=yghM;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=glycolate oxidase subunit D%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=glycolate oxidase subunit%2C FAD-linked;protein_id=AAC76015.1;db_xref=GI:1789351;db_xref=ASAP:ABE-0009773;db_xref=UniProtKB/Swiss-Prot:P0AEP9;db_xref=EcoGene:EG12997 EMBL gene 3128272 3129036 . + . ID=.6465;gene=glcC;locus_tag=b2980;gene_synonym=ECK2975;gene_synonym=JW2947;gene_synonym=yghN;db_xref=EcoGene:EG12998 EMBL CDS 3128272 3129036 . + 0 ID=.6466;gene=glcC;locus_tag=b2980;gene_synonym=ECK2975;gene_synonym=JW2947;gene_synonym=yghN;function=regulator%3B Degradation of small molecules: Carbon compounds;note=transcriptional activator for glc operon%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=glycolate-inducible glc operon transcriptional repressor%3B autorepressor;protein_id=AAC76016.1;db_xref=GI:1789353;db_xref=ASAP:ABE-0009777;db_xref=UniProtKB/Swiss-Prot:P0ACL5;db_xref=EcoGene:EG12998 EMBL gene 3129043 3130143 . - . ID=.6467;gene=yghO;locus_tag=b2981;gene_synonym=ECK2976;gene_synonym=JW5848;pseudo=true;db_xref=EcoGene:EG12999 EMBL CDS 3129043 3130143 . - 0 ID=.6468;gene=yghO;locus_tag=b2981;gene_synonym=ECK2976;gene_synonym=JW5848;note=pseudogene%2C IS-interrupted;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0009779;db_xref=UniProtKB/Swiss-Prot:Q46840;db_xref=EcoGene:EG12999 EMBL sequence_feature 3130146 3131340 . + . ID=.6469;note=*mobile_element_type: insertion sequence:IS5LO EMBL gene 3130178 3131194 . + . ID=.6470;gene=insH1;locus_tag=b2982;gene_synonym=ECK0261;db_xref=EcoGene:EG40008 EMBL CDS 3130178 3131194 . + 0 ID=.6471;gene=insH1;locus_tag=b2982;gene_synonym=ECK0261;function=IS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;codon_start=1;transl_table=11;product=IS5 transposase and trans-activator;protein_id=AAC76018.1;db_xref=GI:1789355;db_xref=ASAP:ABE-0009783;db_xref=UniProtKB/Swiss-Prot:P0CE56;db_xref=EcoGene:EG40008 EMBL gene 3131341 3132408 . - . ID=.6472;gene=yghQ;locus_tag=b2983;gene_synonym=ECK2977;gene_synonym=JW5490;db_xref=EcoGene:EG13001 EMBL CDS 3131341 3132408 . - 0 ID=.6473;gene=yghQ;locus_tag=b2983;gene_synonym=ECK2977;gene_synonym=JW5490;codon_start=1;transl_table=11;product=putative inner membrane polysaccharide flippase;protein_id=AAT48159.1;db_xref=GI:48994915;db_xref=ASAP:ABE-0009786;db_xref=UniProtKB/Swiss-Prot:Q46841;db_xref=EcoGene:EG13001 EMBL gene 3132454 3133212 . - . ID=.6474;gene=yghR;locus_tag=b2984;gene_synonym=ECK2978;gene_synonym=JW2952;db_xref=EcoGene:EG13002 EMBL CDS 3132454 3133212 . - 0 ID=.6475;gene=yghR;locus_tag=b2984;gene_synonym=ECK2978;gene_synonym=JW2952;codon_start=1;transl_table=11;product=putative ATP-binding protein;protein_id=AAC76020.1;db_xref=GI:1789357;db_xref=ASAP:ABE-0009789;db_xref=UniProtKB/Swiss-Prot:P64572;db_xref=EcoGene:EG13002 EMBL gene 3133244 3133957 . - . ID=.6476;gene=yghS;locus_tag=b2985;gene_synonym=ECK2979;gene_synonym=JW5491;db_xref=EcoGene:EG13003 EMBL CDS 3133244 3133957 . - 0 ID=.6477;gene=yghS;locus_tag=b2985;gene_synonym=ECK2979;gene_synonym=JW5491;codon_start=1;transl_table=11;product=putative ATP-binding protein;protein_id=AAC76021.1;db_xref=GI:1789358;db_xref=ASAP:ABE-0009793;db_xref=UniProtKB/Swiss-Prot:Q46843;db_xref=EcoGene:EG13003 EMBL gene 3134131 3134823 . + . ID=.6478;gene=yghT;locus_tag=b2986;gene_synonym=ECK2980;gene_synonym=JW2954;db_xref=EcoGene:EG13004 EMBL CDS 3134131 3134823 . + 0 ID=.6479;gene=yghT;locus_tag=b2986;gene_synonym=ECK2980;gene_synonym=JW2954;codon_start=1;transl_table=11;product=putative ATP-binding protein;protein_id=AAC76022.1;db_xref=GI:1789359;db_xref=ASAP:ABE-0009798;db_xref=UniProtKB/Swiss-Prot:Q46844;db_xref=EcoGene:EG13004 EMBL gene 3134872 3136371 . - . ID=.6480;gene=pitB;locus_tag=b2987;gene_synonym=ECK2981;gene_synonym=JW2955;db_xref=EcoGene:EG12883 EMBL CDS 3134872 3136371 . - 0 ID=.6481;gene=pitB;locus_tag=b2987;gene_synonym=ECK2981;gene_synonym=JW2955;function=transport%3B Transport of small molecules: Anions;note=low-affinity phosphate transport%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006793 - phosphorus metabolic process;codon_start=1;transl_table=11;product=phosphate transporter;protein_id=AAC76023.1;db_xref=GI:1789360;db_xref=ASAP:ABE-0009800;db_xref=UniProtKB/Swiss-Prot:P43676;db_xref=EcoGene:EG12883 EMBL gene 3136663 3138522 . - . ID=.6482;gene=gss;locus_tag=b2988;gene_synonym=ECK2982;gene_synonym=gsp;gene_synonym=JW2956;db_xref=EcoGene:EG12882 EMBL CDS 3136663 3138522 . - 0 ID=.6483;gene=gss;locus_tag=b2988;gene_synonym=ECK2982;gene_synonym=gsp;gene_synonym=JW2956;ec_number=3.5.1.78;ec_number=6.3.1.8;function=enzyme%3B Central intermediary metabolism: Polyamine biosynthesis;note=glutathionylspermidine synthetase/amidase%3B GO_process: GO:0006596 - polyamine biosynthetic process;codon_start=1;transl_table=11;product=glutathionylspermidine amidase and glutathionylspermidine synthetase;protein_id=AAC76024.1;db_xref=GI:1789361;db_xref=ASAP:ABE-0009804;db_xref=UniProtKB/Swiss-Prot:P0AES0;db_xref=EcoGene:EG12882 EMBL gene 3138727 3139593 . + . ID=.6484;gene=yghU;locus_tag=b2989;gene_synonym=ECK2983;gene_synonym=JW5492;db_xref=EcoGene:EG13005 EMBL CDS 3138727 3139593 . + 0 ID=.6485;gene=yghU;locus_tag=b2989;gene_synonym=ECK2983;gene_synonym=JW5492;codon_start=1;transl_table=11;product=putative S-transferase;protein_id=AAC76025.2;db_xref=GI:87082195;db_xref=ASAP:ABE-0009812;db_xref=UniProtKB/Swiss-Prot:Q46845;db_xref=EcoGene:EG13005 EMBL repeat_region 3139621 3139703 . + . ID=.6486;note=REP221 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 3139716 3139964 . - . ID=.6487;gene=hybG;locus_tag=b2990;gene_synonym=ECK2984;gene_synonym=JW2958;db_xref=EcoGene:EG11805 EMBL CDS 3139716 3139964 . - 0 ID=.6488;gene=hybG;locus_tag=b2990;gene_synonym=ECK2984;gene_synonym=JW2958;function=phenotype%3B Energy metabolism%2C carbon: Anaerobic respiration;note=hydrogenase-2 operon protein: may effect maturation of large subunit of hydrogenase-2%3B GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=hydrogenase 2 accessory protein;protein_id=AAC76026.1;db_xref=GI:1789364;db_xref=ASAP:ABE-0009816;db_xref=UniProtKB/Swiss-Prot:P0AAM7;db_xref=EcoGene:EG11805 EMBL gene 3139977 3140318 . - . ID=.6489;gene=hybF;locus_tag=b2991;gene_synonym=ECK2985;gene_synonym=JW5493;db_xref=EcoGene:EG11804 EMBL CDS 3139977 3140318 . - 0 ID=.6490;gene=hybF;locus_tag=b2991;gene_synonym=ECK2985;gene_synonym=JW5493;function=regulator%3B Energy metabolism%2C carbon: Anaerobic respiration;note=may modulate levels of hydrogenease-2%3B GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=protein involved with the maturation of hydrogenases 1 and 2;protein_id=AAC76027.1;db_xref=GI:1789365;db_xref=ASAP:ABE-0009818;db_xref=UniProtKB/Swiss-Prot:P0A703;db_xref=EcoGene:EG11804 EMBL gene 3140311 3140799 . - . ID=.6491;gene=hybE;locus_tag=b2992;gene_synonym=ECK2986;gene_synonym=JW2960;db_xref=EcoGene:EG11803 EMBL CDS 3140311 3140799 . - 0 ID=.6492;gene=hybE;locus_tag=b2992;gene_synonym=ECK2986;gene_synonym=JW2960;function=phenotype%3B Energy metabolism%2C carbon: Anaerobic respiration;note=member of hyb operon;codon_start=1;transl_table=11;product=hydrogenase 2-specific chaperone;protein_id=AAC76028.1;db_xref=GI:1789366;db_xref=ASAP:ABE-0009824;db_xref=UniProtKB/Swiss-Prot:P0AAN1;db_xref=EcoGene:EG11803 EMBL gene 3140792 3141286 . - . ID=.6493;gene=hybD;locus_tag=b2993;gene_synonym=ECK2987;gene_synonym=JW2961;db_xref=EcoGene:EG11802 EMBL CDS 3140792 3141286 . - 0 ID=.6494;gene=hybD;locus_tag=b2993;gene_synonym=ECK2987;gene_synonym=JW2961;function=putative enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;note=probable processing element for hydrogenase-2%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=maturation protease for hydrogenase 2;protein_id=AAC76029.1;db_xref=GI:1789367;db_xref=ASAP:ABE-0009826;db_xref=UniProtKB/Swiss-Prot:P37182;db_xref=EcoGene:EG11802 EMBL gene 3141286 3142989 . - . ID=.6495;gene=hybC;locus_tag=b2994;gene_synonym=ECK2988;gene_synonym=JW2962;db_xref=EcoGene:EG11801 EMBL CDS 3141286 3142989 . - 0 ID=.6496;gene=hybC;locus_tag=b2994;gene_synonym=ECK2988;gene_synonym=JW2962;ec_number=1.12.99.6;function=putative enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;note=probable large subunit%2C hydrogenase-2%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=hydrogenase 2%2C large subunit;protein_id=AAC76030.1;db_xref=GI:1789368;db_xref=ASAP:ABE-0009828;db_xref=UniProtKB/Swiss-Prot:P0ACE0;db_xref=EcoGene:EG11801 EMBL gene 3142986 3144164 . - . ID=.6497;gene=hybB;locus_tag=b2995;gene_synonym=ECK2989;gene_synonym=JW5494;db_xref=EcoGene:EG11800 EMBL CDS 3142986 3144164 . - 0 ID=.6498;gene=hybB;locus_tag=b2995;gene_synonym=ECK2989;gene_synonym=JW5494;function=putative enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;note=probable cytochrome Ni/Fe component of hydrogenase-2%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0017004 - cytochrome complex assembly;codon_start=1;transl_table=11;product=putative hydrogenase 2 cytochrome b type component;protein_id=AAC76031.1;db_xref=GI:2367183;db_xref=ASAP:ABE-0009830;db_xref=UniProtKB/Swiss-Prot:P37180;db_xref=EcoGene:EG11800 EMBL gene 3144154 3145140 . - . ID=.6499;gene=hybA;locus_tag=b2996;gene_synonym=ECK2990;gene_synonym=hydL;gene_synonym=JW2964;db_xref=EcoGene:EG11799 EMBL CDS 3144154 3145140 . - 0 ID=.6500;gene=hybA;locus_tag=b2996;gene_synonym=ECK2990;gene_synonym=hydL;gene_synonym=JW2964;function=enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;note=hydrogenase-2 small subunit;codon_start=1;transl_table=11;product=hydrogenase 2 4Fe-4S ferredoxin-type component;protein_id=AAC76032.1;db_xref=GI:1789370;db_xref=ASAP:ABE-0009832;db_xref=UniProtKB/Swiss-Prot:P0AAJ8;db_xref=EcoGene:EG11799 EMBL gene 3145143 3146261 . - . ID=.6501;gene=hybO;locus_tag=b2997;gene_synonym=ECK2991;gene_synonym=JW2965;gene_synonym=yghV;db_xref=EcoGene:EG13006 EMBL CDS 3145143 3146261 . - 0 ID=.6502;gene=hybO;locus_tag=b2997;gene_synonym=ECK2991;gene_synonym=JW2965;gene_synonym=yghV;ec_number=1.12.99.6;function=putative enzyme%3B Not classified;note=GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=hydrogenase 2%2C small subunit;protein_id=AAC76033.1;db_xref=GI:1789371;db_xref=ASAP:ABE-0009834;db_xref=UniProtKB/Swiss-Prot:P69741;db_xref=EcoGene:EG13006 EMBL gene 3146450 3146737 . - . ID=.6503;gene=yghW;locus_tag=b2998;gene_synonym=ECK2992;gene_synonym=JW2966;db_xref=EcoGene:EG13007 EMBL CDS 3146450 3146737 . - 0 ID=.6504;gene=yghW;locus_tag=b2998;gene_synonym=ECK2992;gene_synonym=JW2966;codon_start=1;transl_table=11;product=DUF2623 family protein;protein_id=AAC76034.1;db_xref=GI:1789372;db_xref=ASAP:ABE-0009839;db_xref=UniProtKB/Swiss-Prot:P64574;db_xref=EcoGene:EG13007 EMBL gene 3146856 3147691 . - . ID=.6505;gene=yghX;locus_tag=b4658;gene_synonym=ECK2993;gene_synonym=JW5926;gene_synonym=yghY;pseudo=true;db_xref=EcoGene:EG13008 EMBL biological_region 3146856 3147691 . - 0 ID=.6506;featflags=type:CDS;gene=yghX;locus_tag=b4658;gene_synonym=ECK2993;gene_synonym=JW5926;gene_synonym=yghY;note=pseudogene%2C dienlactone hydrolase family;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0009842;db_xref=ASAP:ABE-0009844;db_xref=UniProtKB/Swiss-Prot:Q7DFU6;db_xref=EcoGene:EG13008 EMBL CDS 3146856 3147272 . - 0 Parent=.6506 EMBL CDS 3147272 3147691 . - 0 Parent=.6506 EMBL gene 3147897 3148937 . + . ID=.6509;gene=gpr;locus_tag=b3001;gene_synonym=ECK2995;gene_synonym=JW2970;gene_synonym=mgrA;gene_synonym=yghZ;db_xref=EcoGene:EG13010 EMBL CDS 3147897 3148937 . + 0 ID=.6510;gene=gpr;locus_tag=b3001;gene_synonym=ECK2995;gene_synonym=JW2970;gene_synonym=mgrA;gene_synonym=yghZ;note=putative reductase%3B GO_function: GO:0005244 - voltage-gated ion channel activity;codon_start=1;transl_table=11;product=L-glyceraldehyde 3-phosphate reductase;protein_id=AAC76037.1;db_xref=GI:1789375;db_xref=ASAP:ABE-0009848;db_xref=UniProtKB/Swiss-Prot:Q46851;db_xref=EcoGene:EG13010 EMBL gene 3148977 3149471 . - . ID=.6511;gene=yqhA;locus_tag=b3002;gene_synonym=ECK2996;gene_synonym=JW2971;db_xref=EcoGene:EG13011 EMBL CDS 3148977 3149471 . - 0 ID=.6512;gene=yqhA;locus_tag=b3002;gene_synonym=ECK2996;gene_synonym=JW2971;note=GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=UPF0114 family putative inner membrane protein;protein_id=AAC76038.1;db_xref=GI:1789376;db_xref=ASAP:ABE-0009850;db_xref=UniProtKB/Swiss-Prot:P67244;db_xref=EcoGene:EG13011 EMBL gene 3149662 3150546 . + . ID=.6513;gene=yghA;locus_tag=b3003;gene_synonym=ECK2997;gene_synonym=JW2972;db_xref=EcoGene:EG11292 EMBL CDS 3149662 3150546 . + 0 ID=.6514;gene=yghA;locus_tag=b3003;gene_synonym=ECK2997;gene_synonym=JW2972;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=putative oxidoreductase;protein_id=AAC76039.1;db_xref=GI:1789378;db_xref=ASAP:ABE-0009859;db_xref=UniProtKB/Swiss-Prot:P0AG84;db_xref=EcoGene:EG11292 EMBL repeat_region 3150554 3150808 . + . ID=.6515;note=RIP222 (repetitive extragenic palindromic) element%3B contains 5 REP sequences and 2 IHF sites EMBL gene 3150818 3151243 . - . ID=.6516;gene=exbD;locus_tag=b3005;gene_synonym=ECK2998;gene_synonym=JW2973;db_xref=EcoGene:EG10272 EMBL CDS 3150818 3151243 . - 0 ID=.6517;gene=exbD;locus_tag=b3005;gene_synonym=ECK2998;gene_synonym=JW2973;function=transport%3B Transport of small molecules: Cations;note=uptake of enterochelin%3B tonB-dependent uptake of B colicins%3B GO_process: GO:0006826 - iron ion transport;codon_start=1;transl_table=11;product=membrane spanning protein in TonB-ExbB-ExbD complex;protein_id=AAC76041.1;db_xref=GI:1789380;db_xref=ASAP:ABE-0009866;db_xref=UniProtKB/Swiss-Prot:P0ABV2;db_xref=EcoGene:EG10272 EMBL gene 3151250 3151984 . - . ID=.6518;gene=exbB;locus_tag=b3006;gene_synonym=ECK2999;gene_synonym=JW2974;db_xref=EcoGene:EG10271 EMBL CDS 3151250 3151984 . - 0 ID=.6519;gene=exbB;locus_tag=b3006;gene_synonym=ECK2999;gene_synonym=JW2974;function=transport%3B Transport of small molecules: Cations;note=uptake of enterochelin%3B tonB-dependent uptake of B colicins%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006826 - iron ion transport;codon_start=1;transl_table=11;product=membrane spanning protein in TonB-ExbB-ExbD complex;protein_id=AAC76042.1;db_xref=GI:1789381;db_xref=ASAP:ABE-0009869;db_xref=UniProtKB/Swiss-Prot:P0ABU7;db_xref=EcoGene:EG10271 EMBL gene 3152236 3153423 . + . ID=.6520;gene=metC;locus_tag=b3008;gene_synonym=ECK3000;gene_synonym=JW2975;db_xref=EcoGene:EG10583 EMBL CDS 3152236 3153423 . + 0 ID=.6521;gene=metC;locus_tag=b3008;gene_synonym=ECK3000;gene_synonym=JW2975;ec_number=4.4.1.8;function=enzyme%3B Amino acid biosynthesis: Methionine;note=cystathionine beta-lyase (beta-cystathionase)%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009086 - methionine biosynthetic process;codon_start=1;transl_table=11;product=cystathionine beta-lyase%2C PLP-dependent;protein_id=AAC76044.1;db_xref=GI:1789383;db_xref=ASAP:ABE-0009878;db_xref=UniProtKB/Swiss-Prot:P06721;db_xref=EcoGene:EG10583 EMBL gene 3153563 3154222 . + . ID=.6522;gene=yghB;locus_tag=b3009;gene_synonym=ECK3001;gene_synonym=JW2976;db_xref=EcoGene:EG11824 EMBL CDS 3153563 3154222 . + 0 ID=.6523;gene=yghB;locus_tag=b3009;gene_synonym=ECK3001;gene_synonym=JW2976;function=membrane%3B inner membrane%3B cell division;note=GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=general envelope maintenance protein%3B DedA family inner membrane protein%3B putative multidrug efflux transporter;protein_id=AAC76045.1;db_xref=GI:1789384;db_xref=ASAP:ABE-0009882;db_xref=UniProtKB/Swiss-Prot:P0AA60;db_xref=EcoGene:EG11824 EMBL gene 3154262 3155218 . - . ID=.6524;gene=yqhC;locus_tag=b3010;gene_synonym=ECK3002;gene_synonym=JW5849;db_xref=EcoGene:EG13013 EMBL CDS 3154262 3155218 . - 0 ID=.6525;gene=yqhC;locus_tag=b3010;gene_synonym=ECK3002;gene_synonym=JW5849;function=regulator%3B Not classified;note=putative ARAC-type regulatory protein%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=transcriptional activator of yqhD;protein_id=AAC76046.2;db_xref=GI:87082197;db_xref=ASAP:ABE-0009884;db_xref=UniProtKB/Swiss-Prot:Q46855;db_xref=EcoGene:EG13013 EMBL gene 3155355 3156518 . + . ID=.6526;gene=yqhD;locus_tag=b3011;gene_synonym=ECK3003;gene_synonym=JW2978;db_xref=EcoGene:EG13014 EMBL CDS 3155355 3156518 . + 0 ID=.6527;gene=yqhD;locus_tag=b3011;gene_synonym=ECK3003;gene_synonym=JW2978;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=putative oxidoreductase;codon_start=1;transl_table=11;product=aldehyde reductase%2C NADPH-dependent;protein_id=AAC76047.1;db_xref=GI:1789386;db_xref=ASAP:ABE-0009888;db_xref=UniProtKB/Swiss-Prot:Q46856;db_xref=EcoGene:EG13014 EMBL gene 3156623 3157450 . + . ID=.6528;gene=dkgA;locus_tag=b3012;gene_synonym=ECK3004;gene_synonym=JW5499;gene_synonym=yqhE;db_xref=EcoGene:EG13015 EMBL CDS 3156623 3157450 . + 0 ID=.6529;gene=dkgA;locus_tag=b3012;gene_synonym=ECK3004;gene_synonym=JW5499;gene_synonym=yqhE;ec_number=1.1.1.274;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=2%2C5-diketo-D-gluconate reductase A;protein_id=AAC76048.2;db_xref=GI:87082198;db_xref=ASAP:ABE-0009892;db_xref=UniProtKB/Swiss-Prot:Q46857;db_xref=EcoGene:EG13015 EMBL gene 3157650 3158576 . + . ID=.6530;gene=yqhG;locus_tag=b3013;gene_synonym=ECK3005;gene_synonym=JW5500;gene_synonym=yqhF;db_xref=EcoGene:EG13017 EMBL CDS 3157650 3158576 . + 0 ID=.6531;gene=yqhG;locus_tag=b3013;gene_synonym=ECK3005;gene_synonym=JW5500;gene_synonym=yqhF;codon_start=1;transl_table=11;product=DUF3828 family putative periplasmic protein;protein_id=AAT48160.1;db_xref=GI:48994916;db_xref=ASAP:ABE-0009895;db_xref=UniProtKB/Swiss-Prot:Q46858;db_xref=EcoGene:EG13017 EMBL gene 3158627 3158884 . + . ID=.6532;gene=yqhH;locus_tag=b3014;gene_synonym=ECK3006;gene_synonym=JW2982;db_xref=EcoGene:EG13018 EMBL CDS 3158627 3158884 . + 0 ID=.6533;gene=yqhH;locus_tag=b3014;gene_synonym=ECK3006;gene_synonym=JW2982;note=GO_component: GO:0009279 - cell outer membrane;codon_start=1;transl_table=11;product=outer membrane lipoprotein%2C Lpp paralog;protein_id=AAC76050.1;db_xref=GI:1789390;db_xref=ASAP:ABE-0009898;db_xref=UniProtKB/Swiss-Prot:P65298;db_xref=EcoGene:EG13018 EMBL gene 3158927 3161146 . - . ID=.6534;gene=ygiQ;locus_tag=b4469;gene_synonym=ECK3007;gene_synonym=JW5501;gene_synonym=ygiR;db_xref=EcoGene:EG13019 EMBL CDS 3158927 3161146 . - 0 ID=.6535;gene=ygiQ;locus_tag=b4469;gene_synonym=ECK3007;gene_synonym=JW5501;gene_synonym=ygiR;codon_start=1;transl_table=11;product=Radical SAM superfamily protein;protein_id=AAT48161.1;db_xref=GI:48994917;db_xref=ASAP:ABE-0174099;db_xref=UniProtKB/Swiss-Prot:Q46861;db_xref=EcoGene:EG13019 EMBL gene 3161257 3162669 . - . ID=.6536;gene=ftsP;locus_tag=b3017;gene_synonym=ECK3008;gene_synonym=JW2985;gene_synonym=sufI;gene_synonym=sui;gene_synonym=ygiJ;db_xref=EcoGene:EG11376 EMBL CDS 3161257 3162669 . - 0 ID=.6537;gene=ftsP;locus_tag=b3017;gene_synonym=ECK3008;gene_synonym=JW2985;gene_synonym=sufI;gene_synonym=sui;gene_synonym=ygiJ;function=phenotype%3B Not classified;note=suppressor of ftsI;codon_start=1;transl_table=11;product=septal ring component that protects the divisome from stress%3B multicopy suppressor of ftsI(Ts);protein_id=AAC76053.1;db_xref=GI:1789394;db_xref=ASAP:ABE-0009905;db_xref=UniProtKB/Swiss-Prot:P26648;db_xref=EcoGene:EG11376 EMBL gene 3162744 3163481 . - . ID=.6538;gene=plsC;locus_tag=b3018;gene_synonym=ECK3009;gene_synonym=JW2986;gene_synonym=parF;db_xref=EcoGene:EG11377 EMBL CDS 3162744 3163481 . - 0 ID=.6539;gene=plsC;locus_tag=b3018;gene_synonym=ECK3009;gene_synonym=JW2986;gene_synonym=parF;ec_number=2.3.1.51;function=enzyme%3B Macromolecule synthesis%2C modification: Phospholipids;experiment=N-terminus verified by Edman degradation: PMID 1557036;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0008654 - phospholipid biosynthetic process;codon_start=1;transl_table=11;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;protein_id=AAC76054.1;db_xref=GI:1789395;db_xref=ASAP:ABE-0009910;db_xref=UniProtKB/Swiss-Prot:P26647;db_xref=EcoGene:EG11377 EMBL repeat_region 3163644 3163673 . + . ID=.6540;note=REP223 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 3163715 3165973 . - . ID=.6541;gene=parC;locus_tag=b3019;gene_synonym=ECK3010;gene_synonym=JW2987;db_xref=EcoGene:EG10686 EMBL CDS 3163715 3165973 . - 0 ID=.6542;gene=parC;locus_tag=b3019;gene_synonym=ECK3010;gene_synonym=JW2987;ec_number=5.99.1.-;function=enzyme%3B DNA - replication%2C repair%2C restriction/modification;note=DNA topoisomerase IV subunit A%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006261 - DNA-dependent DNA replication;codon_start=1;transl_table=11;product=DNA topoisomerase IV%2C subunit A;protein_id=AAC76055.1;db_xref=GI:1789396;db_xref=ASAP:ABE-0009916;db_xref=UniProtKB/Swiss-Prot:P0AFI2;db_xref=EcoGene:EG10686 EMBL gene 3166111 3167718 . - . ID=.6543;gene=ygiS;locus_tag=b3020;gene_synonym=ECK3011;gene_synonym=JW2988;db_xref=EcoGene:EG13021 EMBL CDS 3166111 3167718 . - 0 ID=.6544;gene=ygiS;locus_tag=b3020;gene_synonym=ECK3011;gene_synonym=JW2988;function=putative transport%3B Not classified;note=putative transport periplasmic protein%3B GO_component: GO:0042597 - periplasmic space;codon_start=1;transl_table=11;product=putative ABC transporter permease;protein_id=AAC76056.1;db_xref=GI:1789397;db_xref=ASAP:ABE-0009920;db_xref=UniProtKB/Swiss-Prot:Q46863;db_xref=EcoGene:EG13021 EMBL gene 3167851 3168246 . - . ID=.6545;gene=mqsA;locus_tag=b3021;gene_synonym=ECK3012;gene_synonym=JW2989;gene_synonym=ygiT;db_xref=EcoGene:EG13022 EMBL CDS 3167851 3168246 . - 0 ID=.6546;gene=mqsA;locus_tag=b3021;gene_synonym=ECK3012;gene_synonym=JW2989;gene_synonym=ygiT;codon_start=1;transl_table=11;product=antitoxin for MqsR toxin%3B transcriptional repressor;protein_id=AAC76057.1;db_xref=GI:1789398;db_xref=ASAP:ABE-0009923;db_xref=UniProtKB/Swiss-Prot:Q46864;db_xref=EcoGene:EG13022 EMBL gene 3168248 3168544 . - . ID=.6547;gene=mqsR;locus_tag=b3022;gene_synonym=ECK3013;gene_synonym=JW2990;gene_synonym=ygiU;db_xref=EcoGene:EG13023 EMBL CDS 3168248 3168544 . - 0 ID=.6548;gene=mqsR;locus_tag=b3022;gene_synonym=ECK3013;gene_synonym=JW2990;gene_synonym=ygiU;codon_start=1;transl_table=11;product=GCU-specific mRNA interferase toxin of the MqsR-MqsA toxin-antitoxin system%3B biofilm/motility regulator%3B anti-repressor;protein_id=AAC76058.1;db_xref=GI:1789399;db_xref=ASAP:ABE-0009925;db_xref=UniProtKB/Swiss-Prot:Q46865;db_xref=EcoGene:EG13023 EMBL gene 3168749 3169231 . - . ID=.6549;gene=ygiV;locus_tag=b3023;gene_synonym=ECK3014;gene_synonym=JW5502;db_xref=EcoGene:EG13024 EMBL CDS 3168749 3169231 . - 0 ID=.6550;gene=ygiV;locus_tag=b3023;gene_synonym=ECK3014;gene_synonym=JW5502;codon_start=1;transl_table=11;product=transcriptional repressor for mcbR biofilm gene;protein_id=AAT48162.1;db_xref=GI:48994918;db_xref=ASAP:ABE-0009928;db_xref=UniProtKB/Swiss-Prot:Q46866;db_xref=EcoGene:EG13024 EMBL gene 3169284 3169676 . - . ID=.6551;gene=ygiW;locus_tag=b3024;gene_synonym=ECK3015;gene_synonym=JW2992;db_xref=EcoGene:EG13025 EMBL CDS 3169284 3169676 . - 0 ID=.6552;gene=ygiW;locus_tag=b3024;gene_synonym=ECK3015;gene_synonym=JW2992;codon_start=1;transl_table=11;product=hydrogen peroxide and cadmium resistance periplasmic protein%3B stress-induced OB-fold protein;protein_id=AAC76060.1;db_xref=GI:1789401;db_xref=ASAP:ABE-0009930;db_xref=UniProtKB/Swiss-Prot:P0ADU5;db_xref=EcoGene:EG13025 EMBL gene 3169828 3170487 . + . ID=.6553;gene=qseB;locus_tag=b3025;gene_synonym=ECK3016;gene_synonym=JW2993;gene_synonym=preA;gene_synonym=ygiX;db_xref=EcoGene:EG13026 EMBL CDS 3169828 3170487 . + 0 ID=.6554;gene=qseB;locus_tag=b3025;gene_synonym=ECK3016;gene_synonym=JW2993;gene_synonym=preA;gene_synonym=ygiX;note=putative 2-component transcriptional regulator%3B GO_process: GO:0006355 - regulation of transcription%2C DNA-dependent;codon_start=1;transl_table=11;product=quorum sensing DNA-binding response regulator in two-component regulatory system with QseC;protein_id=AAC76061.1;db_xref=GI:1789402;db_xref=ASAP:ABE-0009936;db_xref=UniProtKB/Swiss-Prot:P52076;db_xref=EcoGene:EG13026 EMBL gene 3170484 3171833 . + . ID=.6555;gene=qseC;locus_tag=b3026;gene_synonym=ECK3017;gene_synonym=JW2994;gene_synonym=preB;gene_synonym=ygiY;db_xref=EcoGene:EG13027 EMBL CDS 3170484 3171833 . + 0 ID=.6556;gene=qseC;locus_tag=b3026;gene_synonym=ECK3017;gene_synonym=JW2994;gene_synonym=preB;gene_synonym=ygiY;note=putative 2-component sensor protein%3B GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=quorum sensing sensory histidine kinase in two-component regulatory system with QseB;protein_id=AAC76062.1;db_xref=GI:1789403;db_xref=ASAP:ABE-0009938;db_xref=UniProtKB/Swiss-Prot:P40719;db_xref=EcoGene:EG13027 EMBL gene 3171879 3172211 . - . ID=.6557;gene=ygiZ;locus_tag=b3027;gene_synonym=ECK3018;gene_synonym=JW2995;db_xref=EcoGene:EG13028 EMBL CDS 3171879 3172211 . - 0 ID=.6558;gene=ygiZ;locus_tag=b3027;gene_synonym=ECK3018;gene_synonym=JW2995;codon_start=1;transl_table=11;product=inner membrane protein;protein_id=AAC76063.1;db_xref=GI:1789404;db_xref=ASAP:ABE-0009940;db_xref=UniProtKB/Swiss-Prot:Q46867;db_xref=EcoGene:EG13028 EMBL gene 3172530 3173111 . + . ID=.6559;gene=mdaB;locus_tag=b3028;gene_synonym=ECK3019;gene_synonym=JW2996;gene_synonym=mda66;db_xref=EcoGene:EG12656 EMBL CDS 3172530 3173111 . + 0 ID=.6560;gene=mdaB;locus_tag=b3028;gene_synonym=ECK3019;gene_synonym=JW2996;gene_synonym=mda66;ec_number=1.6.5.10;function=phenotype%3B Not classified;note=modulator of drug activity B%3B GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=NADPH quinone reductase;protein_id=AAC76064.1;db_xref=GI:1789406;db_xref=ASAP:ABE-0009946;db_xref=UniProtKB/Swiss-Prot:P0AEY5;db_xref=EcoGene:EG12656 EMBL gene 3173142 3173456 . + . ID=.6561;gene=ygiN;locus_tag=b3029;gene_synonym=ECK3020;gene_synonym=JW2997;db_xref=EcoGene:EG12657 EMBL CDS 3173142 3173456 . + 0 ID=.6562;gene=ygiN;locus_tag=b3029;gene_synonym=ECK3020;gene_synonym=JW2997;experiment=N-terminus verified by Edman degradation: PMID 9298646%2C9600841%2C9740056%2C9868784;codon_start=1;transl_table=11;product=quinol monooxygenase;protein_id=AAC76065.1;db_xref=GI:1789407;db_xref=ASAP:ABE-0009948;db_xref=UniProtKB/Swiss-Prot:P0ADU2;db_xref=EcoGene:EG12657 EMBL gene 3173504 3175396 . - . ID=.6563;gene=parE;locus_tag=b3030;gene_synonym=ECK3021;gene_synonym=JW2998;gene_synonym=nfxD;db_xref=EcoGene:EG10687 EMBL CDS 3173504 3175396 . - 0 ID=.6564;gene=parE;locus_tag=b3030;gene_synonym=ECK3021;gene_synonym=JW2998;gene_synonym=nfxD;ec_number=5.99.1.-;function=enzyme%3B DNA - replication%2C repair%2C restriction/modification;note=DNA topoisomerase IV subunit B%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006261 - DNA-dependent DNA replication;codon_start=1;transl_table=11;product=DNA topoisomerase IV%2C subunit B;protein_id=AAC76066.1;db_xref=GI:1789408;db_xref=ASAP:ABE-0009950;db_xref=UniProtKB/Swiss-Prot:P20083;db_xref=EcoGene:EG10687 EMBL gene 3175425 3176006 . - . ID=.6565;gene=yqiA;locus_tag=b3031;gene_synonym=ECK3022;gene_synonym=JW2999;gene_synonym=yzzI;db_xref=EcoGene:EG12186 EMBL CDS 3175425 3176006 . - 0 ID=.6566;gene=yqiA;locus_tag=b3031;gene_synonym=ECK3022;gene_synonym=JW2999;gene_synonym=yzzI;codon_start=1;transl_table=11;product=acyl CoA esterase;protein_id=AAC76067.1;db_xref=GI:1789409;db_xref=ASAP:ABE-0009953;db_xref=UniProtKB/Swiss-Prot:P0A8Z7;db_xref=EcoGene:EG12186 EMBL gene 3176006 3176833 . - . ID=.6567;gene=cpdA;locus_tag=b3032;gene_synonym=ECK3023;gene_synonym=icc;gene_synonym=JW3000;db_xref=EcoGene:EG12187 EMBL CDS 3176006 3176833 . - 0 ID=.6568;gene=cpdA;locus_tag=b3032;gene_synonym=ECK3023;gene_synonym=icc;gene_synonym=JW3000;ec_number=3.1.4.17;function=regulator%3B Degradation of small molecules: Carbon compounds;experiment=N-terminus verified by Edman degradation: PMID 8810311;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0008233 - peptidase activity%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=3'%2C5' cAMP phosphodiesterase;protein_id=AAC76068.1;db_xref=GI:1789410;db_xref=ASAP:ABE-0009957;db_xref=UniProtKB/Swiss-Prot:P0AEW4;db_xref=EcoGene:EG12187 EMBL gene 3176858 3177280 . - . ID=.6569;gene=yqiB;locus_tag=b3033;gene_synonym=ECK3024;gene_synonym=JW3001;gene_synonym=yzzH;db_xref=EcoGene:EG12185 EMBL CDS 3176858 3177280 . - 0 ID=.6570;gene=yqiB;locus_tag=b3033;gene_synonym=ECK3024;gene_synonym=JW3001;gene_synonym=yzzH;note=putative enzyme;codon_start=1;transl_table=11;product=DUF1249 protein YqiB;protein_id=AAC76069.1;db_xref=GI:1789411;db_xref=ASAP:ABE-0009959;db_xref=UniProtKB/Swiss-Prot:P0ADU7;db_xref=EcoGene:EG12185 EMBL gene 3177281 3177910 . - . ID=.6571;gene=nudF;locus_tag=b3034;gene_synonym=adpP;gene_synonym=aspP;gene_synonym=ECK3025;gene_synonym=JW3002;gene_synonym=rdsA;gene_synonym=trgB;gene_synonym=yqiE;gene_synonym=yzzG;db_xref=EcoGene:EG12184 EMBL CDS 3177281 3177910 . - 0 ID=.6572;gene=nudF;locus_tag=b3034;gene_synonym=adpP;gene_synonym=aspP;gene_synonym=ECK3025;gene_synonym=JW3002;gene_synonym=rdsA;gene_synonym=trgB;gene_synonym=yqiE;gene_synonym=yzzG;ec_number=3.6.1.13;experiment=N-terminus verified by Edman degradation: PMID 11416161%2C11997136;codon_start=1;transl_table=11;product=ADP-ribose pyrophosphatase;protein_id=AAC76070.1;db_xref=GI:1789412;db_xref=ASAP:ABE-0009961;db_xref=UniProtKB/Swiss-Prot:Q93K97;db_xref=EcoGene:EG12184 EMBL gene 3178115 3179596 . + . ID=.6573;gene=tolC;locus_tag=b3035;gene_synonym=colE1-i;gene_synonym=ECK3026;gene_synonym=JW5503;gene_synonym=mtcB;gene_synonym=mukA;gene_synonym=refI;gene_synonym=toc;gene_synonym=weeA;db_xref=EcoGene:EG11009 EMBL CDS 3178115 3179596 . + 0 ID=.6574;gene=tolC;locus_tag=b3035;gene_synonym=colE1-i;gene_synonym=ECK3026;gene_synonym=JW5503;gene_synonym=mtcB;gene_synonym=mukA;gene_synonym=refI;gene_synonym=toc;gene_synonym=weeA;function=putative membrane%3B Cell division;note=outer membrane channel%3B specific tolerance to colicin E1%3B segregation of daughter chromosomes%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane;codon_start=1;transl_table=11;product=transport channel;protein_id=AAC76071.2;db_xref=GI:87082199;db_xref=ASAP:ABE-0009965;db_xref=UniProtKB/Swiss-Prot:P02930;db_xref=EcoGene:EG11009 EMBL gene 3179744 3180415 . + . ID=.6575;gene=ygiB;locus_tag=b3037;gene_synonym=ECK3028;gene_synonym=JW5927;db_xref=EcoGene:EG11164 EMBL CDS 3179744 3180415 . + 0 ID=.6576;gene=ygiB;locus_tag=b3037;gene_synonym=ECK3028;gene_synonym=JW5927;codon_start=1;transl_table=11;product=DUF1190 family protein;protein_id=AAC76073.3;db_xref=GI:145693179;db_xref=ASAP:ABE-0009969;db_xref=UniProtKB/Swiss-Prot:P0ADT2;db_xref=EcoGene:EG11164 EMBL gene 3180421 3181581 . + . ID=.6577;gene=ygiC;locus_tag=b3038;gene_synonym=ECK3029;gene_synonym=JW3006;db_xref=EcoGene:EG11165 EMBL CDS 3180421 3181581 . + 0 ID=.6578;gene=ygiC;locus_tag=b3038;gene_synonym=ECK3029;gene_synonym=JW3006;function=putative enzyme%3B Not classified;note=putative synthetase/amidase;codon_start=1;transl_table=11;product=ATP-Grasp family ATPase;protein_id=AAC76074.1;db_xref=GI:1789416;db_xref=ASAP:ABE-0009971;db_xref=UniProtKB/Swiss-Prot:P0ADT5;db_xref=EcoGene:EG11165 EMBL repeat_region 3181590 3181613 . + . ID=.6579;note=REP224 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 3181619 3182407 . - . ID=.6580;gene=ygiD;locus_tag=b3039;gene_synonym=ECK3030;gene_synonym=JW3007;db_xref=EcoGene:EG11166 EMBL CDS 3181619 3182407 . - 0 ID=.6581;gene=ygiD;locus_tag=b3039;gene_synonym=ECK3030;gene_synonym=JW3007;codon_start=1;transl_table=11;product=4%2C5- DOPA-extradiol-dioxygenase;protein_id=AAC76075.2;db_xref=GI:226510974;db_xref=ASAP:ABE-0009973;db_xref=UniProtKB/Swiss-Prot:P24197;db_xref=EcoGene:EG11166 EMBL gene 3182550 3183323 . + . ID=.6582;gene=zupT;locus_tag=b3040;gene_synonym=ECK3031;gene_synonym=JW3008;gene_synonym=ygiE;db_xref=EcoGene:EG11167 EMBL CDS 3182550 3183323 . + 0 ID=.6583;gene=zupT;locus_tag=b3040;gene_synonym=ECK3031;gene_synonym=JW3008;gene_synonym=ygiE;codon_start=1;transl_table=11;product=zinc transporter;protein_id=AAC76076.1;db_xref=GI:1789419;db_xref=ASAP:ABE-0009977;db_xref=UniProtKB/Swiss-Prot:P0A8H3;db_xref=EcoGene:EG11167 EMBL gene 3183813 3184466 . - . ID=.6584;gene=ribB;locus_tag=b3041;gene_synonym=ECK3032;gene_synonym=htrP;gene_synonym=JW3009;gene_synonym=luxH;db_xref=EcoGene:EG10465 EMBL CDS 3183813 3184466 . - 0 ID=.6585;gene=ribB;locus_tag=b3041;gene_synonym=ECK3032;gene_synonym=htrP;gene_synonym=JW3009;gene_synonym=luxH;ec_number=4.1.99.12;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Riboflavin;experiment=N-terminus verified by Edman degradation: PMID 1597419;note=3%2C4 dihydroxy-2-butanone-4-phosphate synthase;codon_start=1;transl_table=11;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=AAC76077.1;db_xref=GI:1789420;db_xref=ASAP:ABE-0009980;db_xref=UniProtKB/Swiss-Prot:P0A7J0;db_xref=EcoGene:EG10465 EMBL gene 3184840 3185130 . + . ID=.6586;gene=yqiC;locus_tag=b3042;gene_synonym=ECK3033;gene_synonym=JW5505;db_xref=EcoGene:EG13031 EMBL CDS 3184840 3185130 . + 0 ID=.6587;gene=yqiC;locus_tag=b3042;gene_synonym=ECK3033;gene_synonym=JW5505;experiment=N-terminus verified by Edman degradation: PMID 9868784;codon_start=1;transl_table=11;product=BMFP family putative fusogenic protein;protein_id=AAC76078.2;db_xref=GI:87082201;db_xref=ASAP:ABE-0009987;db_xref=UniProtKB/Swiss-Prot:Q46868;db_xref=EcoGene:EG13031 EMBL gene 3185414 3185965 . + . ID=.6588;gene=ygiL;locus_tag=b3043;gene_synonym=ECK3034;gene_synonym=JW3011;db_xref=EcoGene:EG12363 EMBL CDS 3185414 3185965 . + 0 ID=.6589;gene=ygiL;locus_tag=b3043;gene_synonym=ECK3034;gene_synonym=JW3011;function=putative structural component%3B Surface structures;note=putative fimbrial-like protein%3B GO_component: GO:0009289 - pilus;codon_start=1;transl_table=11;product=putative fimbrial-like adhesin protein;protein_id=AAC76079.1;db_xref=GI:1789422;db_xref=ASAP:ABE-0009992;db_xref=UniProtKB/Swiss-Prot:P39834;db_xref=EcoGene:EG12363 EMBL biological_region 3186061 3189865 . + . ID=.6590;featflags=type:gene;gene=yqiG;locus_tag=b3046;gene_synonym=ECK3035;gene_synonym=JW5507;pseudo=true;db_xref=EcoGene:EG14228 EMBL gene 3186061 3186090 . + . Parent=.6590 EMBL gene 3187427 3189865 . + . Parent=.6590 EMBL biological_region 3186061 3189865 . + 0 ID=.6593;featflags=type:CDS;gene=yqiG;locus_tag=b3046;gene_synonym=ECK3035;gene_synonym=JW5507;note=pseudogene%3B fimbrial export usher family%3Bputative membrane%3B Not classified%3B putative membrane protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0010001;db_xref=UniProtKB/Swiss-Prot:P76655;db_xref=EcoGene:EG14228 EMBL CDS 3186061 3186090 . + 0 Parent=.6593 EMBL CDS 3187427 3189865 . + 0 Parent=.6593 EMBL sequence_feature 3186096 3187426 . + . ID=.6596;note=*mobile_element_type: insertion sequence:IS2I EMBL gene 3186187 3186552 . + . ID=.6597;gene=insC1;locus_tag=b3044;gene_synonym=ECK0357;db_xref=EcoGene:EG40003 EMBL CDS 3186187 3186552 . + 0 ID=.6598;gene=insC1;locus_tag=b3044;gene_synonym=ECK0357;function=IS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;codon_start=1;transl_table=11;product=IS2 repressor TnpA;protein_id=AAC76080.3;db_xref=GI:145693180;db_xref=ASAP:ABE-0009997;db_xref=UniProtKB/Swiss-Prot:P0CF44;db_xref=EcoGene:EG40003 EMBL gene 3186510 3187415 . + . ID=.6599;gene=insD1;locus_tag=b3045;gene_synonym=ECK0358;db_xref=EcoGene:EG40004 EMBL CDS 3186510 3187415 . + 0 ID=.6600;gene=insD1;locus_tag=b3045;gene_synonym=ECK0358;function=IS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;codon_start=1;transl_table=11;product=IS2 transposase TnpB;protein_id=AAC76081.1;db_xref=GI:1789424;db_xref=ASAP:ABE-0009999;db_xref=UniProtKB/Swiss-Prot:P0CF57;db_xref=EcoGene:EG40004 EMBL gene 3189881 3190630 . + . ID=.6601;gene=yqiH;locus_tag=b3047;gene_synonym=ECK3036;gene_synonym=JW5508;db_xref=EcoGene:EG14229 EMBL CDS 3189881 3190630 . + 0 ID=.6602;gene=yqiH;locus_tag=b3047;gene_synonym=ECK3036;gene_synonym=JW5508;function=putative factor%3B Surface structures;note=putative membrane protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=putative periplasmic pilin chaperone;protein_id=AAC76083.2;db_xref=GI:87082203;db_xref=ASAP:ABE-0010003;db_xref=UniProtKB/Swiss-Prot:P77616;db_xref=EcoGene:EG14229 EMBL gene 3190632 3191696 . + . ID=.6603;gene=yqiI;locus_tag=b3048;gene_synonym=ECK3037;gene_synonym=JW5509;db_xref=EcoGene:EG14230 EMBL CDS 3190632 3191696 . + 0 ID=.6604;gene=yqiI;locus_tag=b3048;gene_synonym=ECK3037;gene_synonym=JW5509;function=structural component%3B Surface structures;codon_start=1;transl_table=11;product=fimbrial protein;protein_id=AAC76084.1;db_xref=GI:1789427;db_xref=ASAP:ABE-0010005;db_xref=UniProtKB/Swiss-Prot:P76656;db_xref=EcoGene:EG14230 EMBL gene 3191739 3191939 . - . ID=.6605;gene=glgS;locus_tag=b3049;gene_synonym=ECK3038;gene_synonym=JW3021;gene_synonym=scoR;db_xref=EcoGene:EG11381 EMBL CDS 3191739 3191939 . - 0 ID=.6606;gene=glgS;locus_tag=b3049;gene_synonym=ECK3038;gene_synonym=JW3021;gene_synonym=scoR;function=putative enzyme%3B Macromolecule synthesis%2C modification: Polysaccharides - (cytoplasmic);note=glycogen biosynthesis%2C rpoS dependent%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0000271 - polysaccharide biosynthetic process;codon_start=1;transl_table=11;product=motility and biofilm regulator;protein_id=AAC76085.1;db_xref=GI:1789428;db_xref=ASAP:ABE-0010007;db_xref=UniProtKB/Swiss-Prot:P26649;db_xref=EcoGene:EG11381 EMBL gene 3192208 3192837 . + . ID=.6607;gene=yqiJ;locus_tag=b3050;gene_synonym=ECK3039;gene_synonym=JW3022;db_xref=EcoGene:EG14231 EMBL CDS 3192208 3192837 . + 0 ID=.6608;gene=yqiJ;locus_tag=b3050;gene_synonym=ECK3039;gene_synonym=JW3022;function=putative enzyme%3B Not classified;note=putative oxidoreductase;codon_start=1;transl_table=11;product=DUF1449 family inner membrane protein;protein_id=AAC76086.1;db_xref=GI:1789429;db_xref=ASAP:ABE-0010011;db_xref=UniProtKB/Swiss-Prot:P76657;db_xref=EcoGene:EG14231 EMBL gene 3192864 3194525 . + . ID=.6609;gene=yqiK;locus_tag=b3051;gene_synonym=ECK3040;gene_synonym=JW3023;db_xref=EcoGene:EG14232 EMBL CDS 3192864 3194525 . + 0 ID=.6610;gene=yqiK;locus_tag=b3051;gene_synonym=ECK3040;gene_synonym=JW3023;function=putative membrane%3B Not classified;note=putative membrane protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=PHB family membrane protein%2C function unknown;protein_id=AAC76087.1;db_xref=GI:1789430;db_xref=ASAP:ABE-0010013;db_xref=UniProtKB/Swiss-Prot:P77306;db_xref=EcoGene:EG14232 EMBL gene 3194723 3194865 . - . ID=.6611;gene=sibD;locus_tag=b4447;gene_synonym=C0730;gene_synonym=ECK3041;gene_synonym=IS156;gene_synonym=JWR0251;gene_synonym=QUAD1d;gene_synonym=rygD;gene_synonym=tp8;db_xref=EcoGene:EG31160 EMBL ncRNA 3194723 3194865 . - . ID=.6612;ncrna_class=antisense_RNA;gene=sibD;locus_tag=b4447;gene_synonym=C0730;gene_synonym=ECK3041;gene_synonym=IS156;gene_synonym=JWR0251;gene_synonym=QUAD1d;gene_synonym=rygD;gene_synonym=tp8;product=sRNA antisense regulator of toxic IbsD protein;note=identified in a large scale screen;db_xref=ASAP:ABE-0047267;db_xref=EcoGene:EG31160 EMBL gene 3194766 3194825 . + . ID=.6613;gene=ibsD;locus_tag=b4664;gene_synonym=ECK4479;db_xref=EcoGene:EG14469 EMBL CDS 3194766 3194825 . + 0 ID=.6614;gene=ibsD;locus_tag=b4664;gene_synonym=ECK4479;codon_start=1;transl_table=11;product=toxic membrane protein;protein_id=ACO60008.1;db_xref=GI:226510975;db_xref=UniProtKB/Swiss-Prot:C1P616;db_xref=EcoGene:EG14469 EMBL gene 3195099 3195240 . - . ID=.6615;gene=sibE;locus_tag=b4611;gene_synonym=ECK4420;gene_synonym=QUAD1e;gene_synonym=rygE;db_xref=EcoGene:EG31169 EMBL ncRNA 3195099 3195240 . - . ID=.6616;ncrna_class=antisense_RNA;gene=sibE;locus_tag=b4611;gene_synonym=ECK4420;gene_synonym=QUAD1e;gene_synonym=rygE;product=sRNA antisense regulator of toxic IbsE protein;db_xref=EcoGene:EG31169 EMBL gene 3195141 3195200 . + . ID=.6617;gene=ibsE;locus_tag=b4666;gene_synonym=ECK4481;db_xref=EcoGene:EG14471 EMBL CDS 3195141 3195200 . + 0 ID=.6618;gene=ibsE;locus_tag=b4666;gene_synonym=ECK4481;codon_start=1;transl_table=11;product=toxic membrane protein;protein_id=ACO60009.1;db_xref=GI:226510976;db_xref=UniProtKB/Swiss-Prot:C1P617;db_xref=EcoGene:EG14471 EMBL gene 3195320 3196753 . - . ID=.6619;gene=hldE;locus_tag=b3052;gene_synonym=ECK3042;gene_synonym=gmhC;gene_synonym=JW3024;gene_synonym=rfaE;gene_synonym=waaE;gene_synonym=yqiF;db_xref=EcoGene:EG13416 EMBL CDS 3195320 3196753 . - 0 ID=.6620;gene=hldE;locus_tag=b3052;gene_synonym=ECK3042;gene_synonym=gmhC;gene_synonym=JW3024;gene_synonym=rfaE;gene_synonym=waaE;gene_synonym=yqiF;ec_number=2.7.1.-;ec_number=2.7.7.-;function=putative enzyme%3B Not classified;note=GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0009244 - lipopolysaccharide core region biosynthetic process;codon_start=1;transl_table=11;product=heptose 7-phosphate kinase and heptose 1-phosphate adenyltransferase;protein_id=AAC76088.1;db_xref=GI:1789432;db_xref=ASAP:ABE-0010015;db_xref=UniProtKB/Swiss-Prot:P76658;db_xref=EcoGene:EG13416 EMBL gene 3196801 3199641 . - . ID=.6621;gene=glnE;locus_tag=b3053;gene_synonym=ECK3043;gene_synonym=JW3025;db_xref=EcoGene:EG11602 EMBL CDS 3196801 3199641 . - 0 ID=.6622;gene=glnE;locus_tag=b3053;gene_synonym=ECK3043;gene_synonym=JW3025;ec_number=2.7.7.42;function=enzyme%3B Proteins - translation and modification;note=adenylylating enzyme for glutamine synthetase%3B GO_process: GO:0006807 - nitrogen compound metabolic process%3B GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=fused deadenylyltransferase/adenylyltransferase for glutamine synthetase;protein_id=AAC76089.1;db_xref=GI:1789433;db_xref=ASAP:ABE-0010018;db_xref=UniProtKB/Swiss-Prot:P30870;db_xref=EcoGene:EG11602 EMBL gene 3199664 3200965 . - . ID=.6623;gene=ygiF;locus_tag=b3054;gene_synonym=ECK3044;gene_synonym=JW3026;db_xref=EcoGene:EG11603 EMBL CDS 3199664 3200965 . - 0 ID=.6624;gene=ygiF;locus_tag=b3054;gene_synonym=ECK3044;gene_synonym=JW3026;codon_start=1;transl_table=11;product=inorganic triphosphatase;protein_id=AAC76090.1;db_xref=GI:1789434;db_xref=ASAP:ABE-0010020;db_xref=UniProtKB/Swiss-Prot:P30871;db_xref=EcoGene:EG11603 EMBL gene 3201207 3201827 . + . ID=.6625;gene=ygiM;locus_tag=b3055;gene_synonym=ecfG;gene_synonym=ECK3045;gene_synonym=htrG;gene_synonym=JW3027;db_xref=EcoGene:EG12434 EMBL CDS 3201207 3201827 . + 0 ID=.6626;gene=ygiM;locus_tag=b3055;gene_synonym=ecfG;gene_synonym=ECK3045;gene_synonym=htrG;gene_synonym=JW3027;note=GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=SH3 domain protein;protein_id=AAC76091.1;db_xref=GI:1789435;db_xref=ASAP:ABE-0010028;db_xref=UniProtKB/Swiss-Prot:P0ADT8;db_xref=EcoGene:EG12434 EMBL gene 3201891 3203129 . + . ID=.6627;gene=cca;locus_tag=b3056;gene_synonym=ECK3046;gene_synonym=JW3028;db_xref=EcoGene:EG10136 EMBL CDS 3201891 3203129 . + 0 ID=.6628;gene=cca;locus_tag=b3056;gene_synonym=ECK3046;gene_synonym=JW3028;ec_number=2.7.7.72;ec_number=3.1.4.16;function=enzyme%3B Aminoacyl tRNA synthetases%2C tRNA modification;note=tRNA nucleotidyl transferase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009451 - RNA modification;codon_start=1;transl_table=11;product=fused tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase and phosphatase;protein_id=AAC76092.1;db_xref=GI:1789436;db_xref=ASAP:ABE-0010031;db_xref=UniProtKB/Swiss-Prot:P06961;db_xref=EcoGene:EG10136 EMBL repeat_region 3203144 3203268 . + . ID=.6629;note=REP225 (repetitive extragenic palindromic) element%3B contains 3 REP sequences EMBL gene 3203310 3204131 . - . ID=.6630;gene=bacA;locus_tag=b3057;gene_synonym=ECK3047;gene_synonym=JW3029;gene_synonym=uppP;db_xref=EcoGene:EG11665 EMBL CDS 3203310 3204131 . - 0 ID=.6631;gene=bacA;locus_tag=b3057;gene_synonym=ECK3047;gene_synonym=JW3029;gene_synonym=uppP;ec_number=3.6.1.27;function=putative transport%3B Drug/analog sensitivity;note=bacitracin resistance%3B possibly phosphorylates undecaprenol%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=undecaprenyl pyrophosphate phosphatase;protein_id=AAC76093.1;db_xref=GI:1789437;db_xref=ASAP:ABE-0010034;db_xref=UniProtKB/Swiss-Prot:P60932;db_xref=EcoGene:EG11665 EMBL gene 3204221 3204589 . - . ID=.6632;gene=folB;locus_tag=b3058;gene_synonym=ECK3048;gene_synonym=JW3030;gene_synonym=ygiG;db_xref=EcoGene:EG11673 EMBL CDS 3204221 3204589 . - 0 ID=.6633;gene=folB;locus_tag=b3058;gene_synonym=ECK3048;gene_synonym=JW3030;gene_synonym=ygiG;ec_number=4.1.2.25;function=putative enzyme%3B Not classified;experiment=N-terminus verified by Edman degradation: PMID 8809757;note=putative kinase%3B GO_process: GO:0046656 - folic acid biosynthetic process;codon_start=1;transl_table=11;product=dihydroneopterin aldolase and dihydroneopterin triphosphate 2'-epimerase;protein_id=AAC76094.2;db_xref=GI:87082204;db_xref=ASAP:ABE-0010036;db_xref=UniProtKB/Swiss-Prot:P0AC16;db_xref=EcoGene:EG11673 EMBL gene 3204694 3205311 . + . ID=.6634;gene=plsY;locus_tag=b3059;gene_synonym=ECK3049;gene_synonym=JW3031;gene_synonym=ygiH;db_xref=EcoGene:EG11674 EMBL CDS 3204694 3205311 . + 0 ID=.6635;gene=plsY;locus_tag=b3059;gene_synonym=ECK3049;gene_synonym=JW3031;gene_synonym=ygiH;codon_start=1;transl_table=11;product=putative glycerol-3-phosphate acyltransferase;protein_id=AAC76095.1;db_xref=GI:1789439;db_xref=ASAP:ABE-0010042;db_xref=UniProtKB/Swiss-Prot:P60782;db_xref=EcoGene:EG11674 EMBL gene 3205324 3206256 . - . ID=.6636;gene=ttdR;locus_tag=b3060;gene_synonym=dan;gene_synonym=ECK3050;gene_synonym=JW3032;gene_synonym=ygiP;db_xref=EcoGene:EG12694 EMBL CDS 3205324 3206256 . - 0 ID=.6637;gene=ttdR;locus_tag=b3060;gene_synonym=dan;gene_synonym=ECK3050;gene_synonym=JW3032;gene_synonym=ygiP;function=putative regulator%3B Not classified;note=putative transcriptional regulator LYSR-type%3B GO_function: GO:0016563 - transcription activator activity%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=transcriptional activator of ttdABT;protein_id=AAC76096.1;db_xref=GI:1789440;db_xref=ASAP:ABE-0010045;db_xref=UniProtKB/Swiss-Prot:P45463;db_xref=EcoGene:EG12694 EMBL gene 3206463 3207374 . + . ID=.6638;gene=ttdA;locus_tag=b3061;gene_synonym=ECK3051;gene_synonym=JW3033;gene_synonym=ygjA;db_xref=EcoGene:EG11168 EMBL CDS 3206463 3207374 . + 0 ID=.6639;gene=ttdA;locus_tag=b3061;gene_synonym=ECK3051;gene_synonym=JW3033;gene_synonym=ygjA;ec_number=4.2.1.32;function=enzyme%3B Energy metabolism%2C carbon: Fermentation;note=L-tartrate dehydratase%2C subunit A%3B GO_process: GO:0006113 - fermentation;codon_start=1;transl_table=11;product=L-tartrate dehydratase%2C alpha subunit;protein_id=AAC76097.1;db_xref=GI:1789442;db_xref=ASAP:ABE-0010050;db_xref=UniProtKB/Swiss-Prot:P05847;db_xref=EcoGene:EG11168 EMBL gene 3207371 3207976 . + . ID=.6640;gene=ttdB;locus_tag=b3062;gene_synonym=ECK3052;gene_synonym=JW3034;gene_synonym=ygjB;db_xref=EcoGene:EG11169 EMBL CDS 3207371 3207976 . + 0 ID=.6641;gene=ttdB;locus_tag=b3062;gene_synonym=ECK3052;gene_synonym=JW3034;gene_synonym=ygjB;ec_number=4.2.1.32;function=enzyme%3B Energy metabolism%2C carbon: Fermentation;note=L-tartrate dehydratase%2C subunit B%3B GO_process: GO:0006113 - fermentation;codon_start=1;transl_table=11;product=L-tartrate dehydratase%2C beta subunit;protein_id=AAC76098.1;db_xref=GI:1789443;db_xref=ASAP:ABE-0010052;db_xref=UniProtKB/Swiss-Prot:P0AC35;db_xref=EcoGene:EG11169 EMBL gene 3208024 3209487 . + . ID=.6642;gene=ttdT;locus_tag=b3063;gene_synonym=ECK3053;gene_synonym=JW3035;gene_synonym=ygjC;gene_synonym=ygjE;db_xref=EcoGene:EG12393 EMBL CDS 3208024 3209487 . + 0 ID=.6643;gene=ttdT;locus_tag=b3063;gene_synonym=ECK3053;gene_synonym=JW3035;gene_synonym=ygjC;gene_synonym=ygjE;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=L-tartrate/succinate antiporte;protein_id=AAC76099.1;db_xref=GI:1789444;db_xref=ASAP:ABE-0010056;db_xref=UniProtKB/Swiss-Prot:P39414;db_xref=EcoGene:EG12393 EMBL repeat_region 3209499 3209518 . + . ID=.6644;note=REP226 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 3209530 3210543 . - . ID=.6645;gene=tsaD;locus_tag=b3064;gene_synonym=ECK3054;gene_synonym=gcp;gene_synonym=JW3036;gene_synonym=ygjD;db_xref=EcoGene:EG11171 EMBL CDS 3209530 3210543 . - 0 ID=.6646;gene=tsaD;locus_tag=b3064;gene_synonym=ECK3054;gene_synonym=gcp;gene_synonym=JW3036;gene_synonym=ygjD;function=enzyme%3B tRNA modification;note=putative O-sialoglycoprotein endopeptidase;codon_start=1;transl_table=11;product=tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein%3B glycation binding protein;protein_id=AAC76100.1;db_xref=GI:1789445;db_xref=ASAP:ABE-0010058;db_xref=UniProtKB/Swiss-Prot:P05852;db_xref=EcoGene:EG11171 EMBL gene 3210781 3210996 . + . ID=.6647;gene=rpsU;locus_tag=b3065;gene_synonym=ECK3055;gene_synonym=JW3037;db_xref=EcoGene:EG10920 EMBL CDS 3210781 3210996 . + 0 ID=.6648;gene=rpsU;locus_tag=b3065;gene_synonym=ECK3055;gene_synonym=JW3037;function=structural component%3B Ribosomal proteins - synthesis%2C modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0003735 - structural constituent of ribosome%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=30S ribosomal subunit protein S21;protein_id=AAC76101.1;db_xref=GI:1789446;db_xref=ASAP:ABE-0010063;db_xref=UniProtKB/Swiss-Prot:P68679;db_xref=EcoGene:EG10920 EMBL gene 3211107 3212852 . + . ID=.6649;gene=dnaG;locus_tag=b3066;gene_synonym=dnaP;gene_synonym=ECK3056;gene_synonym=JW3038;gene_synonym=parB;gene_synonym=sdgA;db_xref=EcoGene:EG10239 EMBL CDS 3211107 3212852 . + 0 ID=.6650;gene=dnaG;locus_tag=b3066;gene_synonym=dnaP;gene_synonym=ECK3056;gene_synonym=JW3038;gene_synonym=parB;gene_synonym=sdgA;ec_number=2.7.7.-;function=enzyme%3B DNA - replication%2C repair%2C restriction/modification;note=DNA biosynthesis%3B DNA primase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006261 - DNA-dependent DNA replication;codon_start=1;transl_table=11;product=DNA primase;protein_id=AAC76102.1;db_xref=GI:1789447;db_xref=ASAP:ABE-0010065;db_xref=UniProtKB/Swiss-Prot:P0ABS5;db_xref=EcoGene:EG10239 EMBL gene 3213047 3214888 . + . ID=.6651;gene=rpoD;locus_tag=b3067;gene_synonym=alt;gene_synonym=ECK3057;gene_synonym=JW3039;db_xref=EcoGene:EG10896 EMBL CDS 3213047 3214888 . + 0 ID=.6652;gene=rpoD;locus_tag=b3067;gene_synonym=alt;gene_synonym=ECK3057;gene_synonym=JW3039;function=factor%3B Global regulatory functions;experiment=N-terminus verified by Edman degradation: PMID 1095419;note=RNA polymerase%2C sigma(70) factor%3B regulation of proteins induced at high temperatures%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=RNA polymerase%2C sigma 70 (sigma D) factor;protein_id=AAC76103.1;db_xref=GI:1789448;db_xref=ASAP:ABE-0010070;db_xref=UniProtKB/Swiss-Prot:P00579;db_xref=EcoGene:EG10896 EMBL repeat_region 3214892 3214924 . + . ID=.6653;note=REP227 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 3214967 3215473 . - . ID=.6654;gene=mug;locus_tag=b3068;gene_synonym=dug;gene_synonym=ECK3058;gene_synonym=JW3040;gene_synonym=ygjF;db_xref=EcoGene:EG12717 EMBL CDS 3214967 3215473 . - 0 ID=.6655;gene=mug;locus_tag=b3068;gene_synonym=dug;gene_synonym=ECK3058;gene_synonym=JW3040;gene_synonym=ygjF;ec_number=3.2.2.-;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006281 - DNA repair;codon_start=1;transl_table=11;product=G/U mismatch-specific DNA glycosylase%3B xanthine DNA glycosylase;protein_id=AAC76104.1;db_xref=GI:1789449;db_xref=ASAP:ABE-0010073;db_xref=UniProtKB/Swiss-Prot:P0A9H1;db_xref=EcoGene:EG12717 EMBL gene 3215598 3215673 . + . ID=.6656;gene=ileX;locus_tag=b3069;gene_synonym=ECK3059;gene_synonym=JWR0069;db_xref=EcoGene:EG30046 EMBL tRNA 3215598 3215673 . + . ID=.6657;gene=ileX;locus_tag=b3069;gene_synonym=ECK3059;gene_synonym=JWR0069;product=tRNA-Ile;note=anticodon: CAU;db_xref=ASAP:ABE-0010076;db_xref=EcoGene:EG30046 EMBL gene 3215727 3216491 . - . ID=.6658;gene=yqjH;locus_tag=b3070;gene_synonym=ECK3060;gene_synonym=JW3041;db_xref=EcoGene:EG12953 EMBL CDS 3215727 3216491 . - 0 ID=.6659;gene=yqjH;locus_tag=b3070;gene_synonym=ECK3060;gene_synonym=JW3041;codon_start=1;transl_table=11;product=putative siderophore interacting protein;protein_id=AAC76105.1;db_xref=GI:1789450;db_xref=ASAP:ABE-0010079;db_xref=UniProtKB/Swiss-Prot:Q46871;db_xref=EcoGene:EG12953 EMBL repeat_region 3216601 3216678 . + . ID=.6660;note=REP228 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 3216779 3217402 . + . ID=.6661;gene=yqjI;locus_tag=b3071;gene_synonym=ECK3061;gene_synonym=JW3042;db_xref=EcoGene:EG12954 EMBL CDS 3216779 3217402 . + 0 ID=.6662;gene=yqjI;locus_tag=b3071;gene_synonym=ECK3061;gene_synonym=JW3042;codon_start=1;transl_table=11;product=PadR family putative transcriptional regulator;protein_id=AAC76106.1;db_xref=GI:1789452;db_xref=ASAP:ABE-0010084;db_xref=UniProtKB/Swiss-Prot:P64588;db_xref=EcoGene:EG12954 EMBL repeat_region 3217434 3217522 . + . ID=.6663;note=REP229 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 3217556 3219076 . - . ID=.6664;gene=aer;locus_tag=b3072;gene_synonym=air;gene_synonym=ECK3062;gene_synonym=JW3043;gene_synonym=yqjJ;db_xref=EcoGene:EG12955 EMBL CDS 3217556 3219076 . - 0 ID=.6665;gene=aer;locus_tag=b3072;gene_synonym=air;gene_synonym=ECK3062;gene_synonym=JW3043;gene_synonym=yqjJ;function=regulator%3B Degradation of small molecules: Carbon compounds;note=aerotaxis sensor receptor%2C flavoprotein%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0042330 - taxis;codon_start=1;transl_table=11;product=fused signal transducer for aerotaxis sensory component/methyl accepting chemotaxis component;protein_id=AAC76107.1;db_xref=GI:1789453;db_xref=ASAP:ABE-0010087;db_xref=UniProtKB/Swiss-Prot:P50466;db_xref=EcoGene:EG12955 EMBL gene 3219494 3220873 . + . ID=.6666;gene=patA;locus_tag=b3073;gene_synonym=ECK3063;gene_synonym=JW5510;gene_synonym=ygjG;db_xref=EcoGene:EG12718 EMBL CDS 3219494 3220873 . + 0 ID=.6667;gene=patA;locus_tag=b3073;gene_synonym=ECK3063;gene_synonym=JW5510;gene_synonym=ygjG;ec_number=2.6.1.29;function=putative enzyme%3B Amino acid biosynthesis: Arginine;note=probable ornithine aminotransferase%3B GO_process: GO:0006526 - arginine biosynthetic process%3B GO_process: GO:0008615 - pyridoxine biosynthetic process;codon_start=1;transl_table=11;product=putrescine:2-oxoglutaric acid aminotransferase%2C PLP-dependent;protein_id=AAC76108.3;db_xref=GI:145693181;db_xref=ASAP:ABE-0010092;db_xref=UniProtKB/Swiss-Prot:P42588;db_xref=EcoGene:EG12718 EMBL repeat_region 3220880 3220910 . + . ID=.6668;note=REP230 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 3220915 3221247 . - . ID=.6669;gene=ygjH;locus_tag=b3074;gene_synonym=ECK3064;gene_synonym=JW3045;db_xref=EcoGene:EG12719 EMBL CDS 3220915 3221247 . - 0 ID=.6670;gene=ygjH;locus_tag=b3074;gene_synonym=ECK3064;gene_synonym=JW3045;function=putative enzyme%3B Not classified;note=putative tRNA synthetase%3B GO_process: GO:0006418 - tRNA aminoacylation for protein translation;codon_start=1;transl_table=11;product=putative tRNA binding protein%3B putative tRNA corner chaperone;protein_id=AAC76109.1;db_xref=GI:1789455;db_xref=ASAP:ABE-0010094;db_xref=UniProtKB/Swiss-Prot:P42589;db_xref=EcoGene:EG12719 EMBL gene 3221466 3222449 . + . ID=.6671;gene=ebgR;locus_tag=b3075;gene_synonym=ECK3065;gene_synonym=JW3046;db_xref=EcoGene:EG10254 EMBL CDS 3221466 3222449 . + 0 ID=.6672;gene=ebgR;locus_tag=b3075;gene_synonym=ECK3065;gene_synonym=JW3046;function=regulator%3B Degradation of small molecules: Carbon compounds;note=regulator of ebg operon%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=transcriptional repressor;protein_id=AAC76110.1;db_xref=GI:1789456;db_xref=ASAP:ABE-0010099;db_xref=UniProtKB/Swiss-Prot:P06846;db_xref=EcoGene:EG10254 EMBL gene 3222633 3225725 . + . ID=.6673;gene=ebgA;locus_tag=b3076;gene_synonym=ECK3066;gene_synonym=JW5511;db_xref=EcoGene:EG10252 EMBL CDS 3222633 3225725 . + 0 ID=.6674;gene=ebgA;locus_tag=b3076;gene_synonym=ECK3066;gene_synonym=JW5511;ec_number=3.2.1.23;function=enzyme%3B Degradation of small molecules: Carbon compounds;experiment=N-terminus verified by Edman degradation: PMID 7492325;note=evolved beta-D-galactosidase%2C alpha subunit%3B cryptic gene%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=evolved beta-D-galactosidase%2C alpha subunit;protein_id=AAT48164.1;db_xref=GI:48994920;db_xref=ASAP:ABE-0010104;db_xref=UniProtKB/Swiss-Prot:P06864;db_xref=EcoGene:EG10252 EMBL gene 3225722 3226171 . + . ID=.6675;gene=ebgC;locus_tag=b3077;gene_synonym=ECK3067;gene_synonym=JW3048;db_xref=EcoGene:EG10253 EMBL CDS 3225722 3226171 . + 0 ID=.6676;gene=ebgC;locus_tag=b3077;gene_synonym=ECK3067;gene_synonym=JW3048;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=evolved beta-D-galactosidase%2C beta subunit%3B cryptic gene%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=evolved beta-D-galactosidase%2C beta subunit%3B cupin superfamily;protein_id=AAC76112.1;db_xref=GI:1789458;db_xref=ASAP:ABE-0010106;db_xref=UniProtKB/Swiss-Prot:P0AC73;db_xref=EcoGene:EG10253 EMBL gene 3226234 3227667 . + . ID=.6677;gene=ygjI;locus_tag=b3078;gene_synonym=ebgB;gene_synonym=ECK3068;gene_synonym=JW5512;db_xref=EcoGene:EG12720 EMBL CDS 3226234 3227667 . + 0 ID=.6678;gene=ygjI;locus_tag=b3078;gene_synonym=ebgB;gene_synonym=ECK3068;gene_synonym=JW5512;function=orf%3B Not classified;note=putative oxidoreductase%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative transporter;protein_id=AAT48165.1;db_xref=GI:48994921;db_xref=ASAP:ABE-0010110;db_xref=UniProtKB/Swiss-Prot:P42590;db_xref=EcoGene:EG12720 EMBL gene 3227801 3228871 . + . ID=.6679;gene=ygjJ;locus_tag=b3079;gene_synonym=ECK3069;gene_synonym=JW3050;db_xref=EcoGene:EG12721 EMBL CDS 3227801 3228871 . + 0 ID=.6680;gene=ygjJ;locus_tag=b3079;gene_synonym=ECK3069;gene_synonym=JW3050;codon_start=1;transl_table=11;product=putative periplasmic protein;protein_id=AAC76114.1;db_xref=GI:1789461;db_xref=ASAP:ABE-0010115;db_xref=UniProtKB/Swiss-Prot:P42591;db_xref=EcoGene:EG12721 EMBL gene 3228888 3231239 . + . ID=.6681;gene=ygjK;locus_tag=b3080;gene_synonym=ECK3070;gene_synonym=JW3051;db_xref=EcoGene:EG12722 EMBL CDS 3228888 3231239 . + 0 ID=.6682;gene=ygjK;locus_tag=b3080;gene_synonym=ECK3070;gene_synonym=JW3051;function=enzyme%3B Not classified;note=putative isomerase;codon_start=1;transl_table=11;product=alpha-glucosidase;protein_id=AAC76115.1;db_xref=GI:1789462;db_xref=ASAP:ABE-0010118;db_xref=UniProtKB/Swiss-Prot:P42592;db_xref=EcoGene:EG12722 EMBL repeat_region 3231252 3231534 . + . ID=.6683;note=REP231 (repetitive extragenic palindromic) element%3B contains 6 REP sequences EMBL gene 3231665 3233683 . + . ID=.6684;gene=fadH;locus_tag=b3081;gene_synonym=ECK3071;gene_synonym=JW3052;gene_synonym=ygjL;db_xref=EcoGene:EG12723 EMBL CDS 3231665 3233683 . + 0 ID=.6685;gene=fadH;locus_tag=b3081;gene_synonym=ECK3071;gene_synonym=JW3052;gene_synonym=ygjL;ec_number=1.3.1.34;function=orf%3B Not classified;note=GO_process: GO:0019395 - fatty acid oxidation;codon_start=1;transl_table=11;product=2%2C4-dienoyl-CoA reductase%2C NADH and FMN-linked;protein_id=AAC76116.1;db_xref=GI:1789463;db_xref=ASAP:ABE-0010124;db_xref=UniProtKB/Swiss-Prot:P42593;db_xref=EcoGene:EG12723 EMBL repeat_region 3233699 3233719 . + . ID=.6686;note=REP232 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 3233728 3234144 . - . ID=.6687;gene=higA;locus_tag=b3082;gene_synonym=ECK3072;gene_synonym=JW3053;gene_synonym=ygjM;db_xref=EcoGene:EG12724 EMBL CDS 3233728 3234144 . - 0 ID=.6688;gene=higA;locus_tag=b3082;gene_synonym=ECK3072;gene_synonym=JW3053;gene_synonym=ygjM;note=GO_process: GO:0006355 - regulation of transcription%2C DNA-dependent;codon_start=1;transl_table=11;product=antitoxinof the HigB-HigA toxin-antitoxin system;protein_id=AAC76117.1;db_xref=GI:1789464;db_xref=ASAP:ABE-0010126;db_xref=UniProtKB/Swiss-Prot:P67701;db_xref=EcoGene:EG12724 EMBL gene 3234141 3234455 . - . ID=.6689;gene=higB;locus_tag=b3083;gene_synonym=ECK3073;gene_synonym=JW3054;gene_synonym=ygjN;db_xref=EcoGene:EG12725 EMBL CDS 3234141 3234455 . - 0 ID=.6690;gene=higB;locus_tag=b3083;gene_synonym=ECK3073;gene_synonym=JW3054;gene_synonym=ygjN;codon_start=1;transl_table=11;product=mRNA interferase toxin of the HigB-HigA toxin-antitoxin system;protein_id=AAC76118.1;db_xref=GI:1789465;db_xref=ASAP:ABE-0010128;db_xref=UniProtKB/Swiss-Prot:P64578;db_xref=EcoGene:EG12725 EMBL repeat_region 3234638 3234723 . + . ID=.6691;note=REP233 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 3234739 3235875 . - . ID=.6692;gene=rlmG;locus_tag=b3084;gene_synonym=ECK3074;gene_synonym=JW5513;gene_synonym=rsmD;gene_synonym=ygjO;db_xref=EcoGene:EG12726 EMBL CDS 3234739 3235875 . - 0 ID=.6693;gene=rlmG;locus_tag=b3084;gene_synonym=ECK3074;gene_synonym=JW5513;gene_synonym=rsmD;gene_synonym=ygjO;function=enzyme%3B rRNA modification;note=putative enzyme;codon_start=1;transl_table=11;product=23S rRNA m(2)G1835 methyltransferase%2C SAM-dependent;protein_id=AAC76119.2;db_xref=GI:87082206;db_xref=ASAP:ABE-0010133;db_xref=UniProtKB/Swiss-Prot:P42596;db_xref=EcoGene:EG12726 EMBL gene 3235960 3236463 . + . ID=.6694;gene=ygjP;locus_tag=b3085;gene_synonym=ECK3075;gene_synonym=JW5514;db_xref=EcoGene:EG12727 EMBL CDS 3235960 3236463 . + 0 ID=.6695;gene=ygjP;locus_tag=b3085;gene_synonym=ECK3075;gene_synonym=JW5514;codon_start=1;transl_table=11;product=putative metal dependent hydrolase;protein_id=AAC76120.2;db_xref=GI:87082207;db_xref=ASAP:ABE-0010138;db_xref=UniProtKB/Swiss-Prot:P42597;db_xref=EcoGene:EG12727 EMBL gene 3236540 3237232 . + . ID=.6696;gene=ygjQ;locus_tag=b3086;gene_synonym=ECK3076;gene_synonym=JW3057;db_xref=EcoGene:EG12728 EMBL CDS 3236540 3237232 . + 0 ID=.6697;gene=ygjQ;locus_tag=b3086;gene_synonym=ECK3076;gene_synonym=JW3057;note=GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=DUF218 superfamily protein;protein_id=AAC76121.1;db_xref=GI:1789468;db_xref=ASAP:ABE-0010142;db_xref=UniProtKB/Swiss-Prot:P42598;db_xref=EcoGene:EG12728 EMBL gene 3237311 3238297 . + . ID=.6698;gene=ygjR;locus_tag=b3087;gene_synonym=ECK3077;gene_synonym=JW3058;db_xref=EcoGene:EG12729 EMBL CDS 3237311 3238297 . + 0 ID=.6699;gene=ygjR;locus_tag=b3087;gene_synonym=ECK3077;gene_synonym=JW3058;codon_start=1;transl_table=11;product=putative NAD(P)-dependent dehydrogenase;protein_id=AAC76122.2;db_xref=GI:145693182;db_xref=ASAP:ABE-0010148;db_xref=UniProtKB/Swiss-Prot:P42599;db_xref=EcoGene:EG12729 EMBL gene 3238580 3239545 . + . ID=.6700;gene=alx;locus_tag=b3088;gene_synonym=ECK3079;gene_synonym=JW5515;gene_synonym=ygjT;db_xref=EcoGene:EG12731 EMBL CDS 3238580 3239545 . + 0 ID=.6701;gene=alx;locus_tag=b3088;gene_synonym=ECK3079;gene_synonym=JW5515;gene_synonym=ygjT;function=putative transport%3B Not classified;note=putative transport protein%3B GO_process: GO:0006950 - response to stress;codon_start=1;transl_table=11;product=putative membrane-bound redox modulator;protein_id=AAT48166.1;db_xref=GI:48994922;db_xref=ASAP:ABE-0010151;db_xref=UniProtKB/Swiss-Prot:P42601;db_xref=EcoGene:EG12731 EMBL gene 3239944 3241188 . + . ID=.6702;gene=sstT;locus_tag=b3089;gene_synonym=ECK3080;gene_synonym=JW3060;gene_synonym=ygjU;db_xref=EcoGene:EG12732 EMBL CDS 3239944 3241188 . + 0 ID=.6703;gene=sstT;locus_tag=b3089;gene_synonym=ECK3080;gene_synonym=JW3060;gene_synonym=ygjU;function=putative transport%3B Not classified;note=putative transport protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006564 - L-serine biosynthetic process%3B GO_process: GO:0009088 - threonine biosynthetic process;codon_start=1;transl_table=11;product=sodium:serine/threonine symporter;protein_id=AAC76124.1;db_xref=GI:1789473;db_xref=ASAP:ABE-0010159;db_xref=UniProtKB/Swiss-Prot:P0AGE4;db_xref=EcoGene:EG12732 EMBL gene 3241193 3241744 . - . ID=.6704;gene=ygjV;locus_tag=b3090;gene_synonym=ECK3081;gene_synonym=JW3061;db_xref=EcoGene:EG12733 EMBL CDS 3241193 3241744 . - 0 ID=.6705;gene=ygjV;locus_tag=b3090;gene_synonym=ECK3081;gene_synonym=JW3061;codon_start=1;transl_table=11;product=Imp-YgjV family inner membrane protein;protein_id=AAC76125.1;db_xref=GI:1789474;db_xref=ASAP:ABE-0010161;db_xref=UniProtKB/Swiss-Prot:P42603;db_xref=EcoGene:EG12733 EMBL gene 3241827 3243314 . - . ID=.6706;gene=uxaA;locus_tag=b3091;gene_synonym=ECK3082;gene_synonym=JW3062;gene_synonym=ygjW;db_xref=EcoGene:EG12734 EMBL CDS 3241827 3243314 . - 0 ID=.6707;gene=uxaA;locus_tag=b3091;gene_synonym=ECK3082;gene_synonym=JW3062;gene_synonym=ygjW;ec_number=4.2.1.7;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=altronate hydrolase;protein_id=AAC76126.1;db_xref=GI:1789475;db_xref=ASAP:ABE-0010164;db_xref=UniProtKB/Swiss-Prot:P42604;db_xref=EcoGene:EG12734 EMBL gene 3243329 3244741 . - . ID=.6708;gene=uxaC;locus_tag=b3092;gene_synonym=ECK3083;gene_synonym=JW3063;gene_synonym=ygjX;gene_synonym=ygjY;gene_synonym=ygjZ;db_xref=EcoGene:EG12737 EMBL CDS 3243329 3244741 . - 0 ID=.6709;gene=uxaC;locus_tag=b3092;gene_synonym=ECK3083;gene_synonym=JW3063;gene_synonym=ygjX;gene_synonym=ygjY;gene_synonym=ygjZ;ec_number=5.3.1.12;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=uronate isomerase;protein_id=AAC76127.1;db_xref=GI:2367192;db_xref=ASAP:ABE-0010167;db_xref=UniProtKB/Swiss-Prot:P0A8G3;db_xref=EcoGene:EG12737 EMBL gene 3245224 3246522 . + . ID=.6710;gene=exuT;locus_tag=b3093;gene_synonym=ECK3084;gene_synonym=JW3064;db_xref=EcoGene:EG12738 EMBL CDS 3245224 3246522 . + 0 ID=.6711;gene=exuT;locus_tag=b3093;gene_synonym=ECK3084;gene_synonym=JW3064;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=transport of hexuronates%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=hexuronate transporter;protein_id=AAC76128.2;db_xref=GI:669802030;db_xref=ASAP:ABE-0010171;db_xref=UniProtKB/Swiss-Prot:P0AA78;db_xref=EcoGene:EG12738 EMBL gene 3246652 3247428 . + . ID=.6712;gene=exuR;locus_tag=b3094;gene_synonym=ECK3085;gene_synonym=JW3065;db_xref=EcoGene:EG12739 EMBL CDS 3246652 3247428 . + 0 ID=.6713;gene=exuR;locus_tag=b3094;gene_synonym=ECK3085;gene_synonym=JW3065;function=regulator%3B Degradation of small molecules: Carbon compounds;note=negative regulator of exu regulon%2C exuT%2C uxaAC%2C and uxuB%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=hexuronate regulon transcriptional repressor%3B autorepressor;protein_id=AAC76129.2;db_xref=GI:87082208;db_xref=ASAP:ABE-0010176;db_xref=UniProtKB/Swiss-Prot:P0ACL2;db_xref=EcoGene:EG12739 EMBL gene 3247773 3248435 . + . ID=.6714;gene=yqjA;locus_tag=b3095;gene_synonym=ecfL;gene_synonym=ECK3086;gene_synonym=JW3066;db_xref=EcoGene:EG12740 EMBL CDS 3247773 3248435 . + 0 ID=.6715;gene=yqjA;locus_tag=b3095;gene_synonym=ecfL;gene_synonym=ECK3086;gene_synonym=JW3066;function=membrane%3B inner membrane%3B cell division;note=GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=general envelope maintenance protein%3B DedA family inner membrane protein%3B putative multidrug efflux transporter;protein_id=AAC76130.1;db_xref=GI:1789481;db_xref=ASAP:ABE-0010181;db_xref=UniProtKB/Swiss-Prot:P0AA63;db_xref=EcoGene:EG12740 EMBL gene 3248439 3248822 . + . ID=.6716;gene=mzrA;locus_tag=b3096;gene_synonym=ecfM;gene_synonym=ECK3087;gene_synonym=JW3067;gene_synonym=yqjB;db_xref=EcoGene:EG12741 EMBL CDS 3248439 3248822 . + 0 ID=.6717;gene=mzrA;locus_tag=b3096;gene_synonym=ecfM;gene_synonym=ECK3087;gene_synonym=JW3067;gene_synonym=yqjB;codon_start=1;transl_table=11;product=modulator of EnvZ/OmpR regulon;protein_id=AAC76131.1;db_xref=GI:1789482;db_xref=ASAP:ABE-0010183;db_xref=UniProtKB/Swiss-Prot:P42615;db_xref=EcoGene:EG12741 EMBL gene 3248969 3249337 . + . ID=.6718;gene=yqjC;locus_tag=b3097;gene_synonym=ECK3088;gene_synonym=JW5516;db_xref=EcoGene:EG12742 EMBL CDS 3248969 3249337 . + 0 ID=.6719;gene=yqjC;locus_tag=b3097;gene_synonym=ECK3088;gene_synonym=JW5516;codon_start=1;transl_table=11;product=DUF1090 family putative periplasmic protein;protein_id=AAC76132.2;db_xref=GI:87082209;db_xref=ASAP:ABE-0010188;db_xref=UniProtKB/Swiss-Prot:P42616;db_xref=EcoGene:EG12742 EMBL gene 3249375 3249680 . + . ID=.6720;gene=yqjD;locus_tag=b3098;gene_synonym=ECK3089;gene_synonym=JW3069;db_xref=EcoGene:EG12743 EMBL CDS 3249375 3249680 . + 0 ID=.6721;gene=yqjD;locus_tag=b3098;gene_synonym=ECK3089;gene_synonym=JW3069;codon_start=1;transl_table=11;product=membrane-anchored ribosome-binding protein;protein_id=AAC76133.1;db_xref=GI:1789485;db_xref=ASAP:ABE-0010192;db_xref=UniProtKB/Swiss-Prot:P64581;db_xref=EcoGene:EG12743 EMBL gene 3249683 3250087 . + . ID=.6722;gene=yqjE;locus_tag=b3099;gene_synonym=ECK3090;gene_synonym=JW3070;db_xref=EcoGene:EG12744 EMBL CDS 3249683 3250087 . + 0 ID=.6723;gene=yqjE;locus_tag=b3099;gene_synonym=ECK3090;gene_synonym=JW3070;codon_start=1;transl_table=11;product=DUF1469 family inner membrane protein;protein_id=AAC76134.1;db_xref=GI:1789486;db_xref=ASAP:ABE-0010195;db_xref=UniProtKB/Swiss-Prot:P64585;db_xref=EcoGene:EG12744 EMBL gene 3250077 3250376 . + . ID=.6724;gene=yqjK;locus_tag=b3100;gene_synonym=ECK3091;gene_synonym=JW3071;db_xref=EcoGene:EG14314 EMBL CDS 3250077 3250376 . + 0 ID=.6725;gene=yqjK;locus_tag=b3100;gene_synonym=ECK3091;gene_synonym=JW3071;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC76135.1;db_xref=GI:1789487;db_xref=ASAP:ABE-0010197;db_xref=UniProtKB/Swiss-Prot:Q47710;db_xref=EcoGene:EG14314 EMBL gene 3250562 3250954 . + . ID=.6726;gene=yqjF;locus_tag=b3101;gene_synonym=ECK3092;gene_synonym=JW5850;db_xref=EcoGene:EG12745 EMBL CDS 3250562 3250954 . + 0 ID=.6727;gene=yqjF;locus_tag=b3101;gene_synonym=ECK3092;gene_synonym=JW5850;note=GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=putative quinol oxidase subunit;protein_id=AAC76136.2;db_xref=GI:87082210;db_xref=ASAP:ABE-0010200;db_xref=UniProtKB/Swiss-Prot:P42619;db_xref=EcoGene:EG12745 EMBL gene 3251024 3252010 . + . ID=.6728;gene=yqjG;locus_tag=b3102;gene_synonym=ECK3093;gene_synonym=JW3073;db_xref=EcoGene:EG12746 EMBL CDS 3251024 3252010 . + 0 ID=.6729;gene=yqjG;locus_tag=b3102;gene_synonym=ECK3093;gene_synonym=JW3073;function=putative enzyme%3B Not classified;note=putative transferase;codon_start=1;transl_table=11;product=putative S-transferase;protein_id=AAC76137.1;db_xref=GI:1789489;db_xref=ASAP:ABE-0010203;db_xref=UniProtKB/Swiss-Prot:P42620;db_xref=EcoGene:EG12746 EMBL repeat_region 3252065 3252162 . + . ID=.6730;note=RIP234 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 3252304 3252669 . + . ID=.6731;gene=yhaH;locus_tag=b3103;gene_synonym=ECK3094;gene_synonym=JW3074;db_xref=EcoGene:EG12747 EMBL CDS 3252304 3252669 . + 0 ID=.6732;gene=yhaH;locus_tag=b3103;gene_synonym=ECK3094;gene_synonym=JW3074;function=putative carrier%3B Not classified;note=putative cytochrome%3B GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=DUF805 family inner membrane protein;protein_id=AAC76138.1;db_xref=GI:2367196;db_xref=ASAP:ABE-0010207;db_xref=UniProtKB/Swiss-Prot:P64590;db_xref=EcoGene:EG12747 EMBL repeat_region 3252683 3252705 . + . ID=.6733;note=REP235 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 3252911 3253267 . + . ID=.6734;gene=yhaI;locus_tag=b3104;gene_synonym=ECK3095;gene_synonym=JW3075;db_xref=EcoGene:EG12748 EMBL CDS 3252911 3253267 . + 0 ID=.6735;gene=yhaI;locus_tag=b3104;gene_synonym=ECK3095;gene_synonym=JW3075;function=putative carrier%3B Not classified;note=putative cytochrome%3B GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=DUF805 family inner membrane protein;protein_id=AAC76139.1;db_xref=GI:1789491;db_xref=ASAP:ABE-0010211;db_xref=UniProtKB/Swiss-Prot:P64592;db_xref=EcoGene:EG12748 EMBL gene 3253318 3254214 . - . ID=.6736;gene=yhaJ;locus_tag=b3105;gene_synonym=ECK3096;gene_synonym=JW3076;db_xref=EcoGene:EG12749 EMBL CDS 3253318 3254214 . - 0 ID=.6737;gene=yhaJ;locus_tag=b3105;gene_synonym=ECK3096;gene_synonym=JW3076;function=putative regulator%3B Not classified;note=putative transcriptional regulator LYSR-type%3B GO_function: GO:0016563 - transcription activator activity%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=LysR family putative transcriptional regulator;protein_id=AAC76140.1;db_xref=GI:1789492;db_xref=ASAP:ABE-0010213;db_xref=UniProtKB/Swiss-Prot:P67660;db_xref=EcoGene:EG12749 EMBL gene 3254319 3255020 . + . ID=.6738;gene=yhaK;locus_tag=b3106;gene_synonym=ECK3097;gene_synonym=JW3077;db_xref=EcoGene:EG12750 EMBL CDS 3254319 3255020 . + 0 ID=.6739;gene=yhaK;locus_tag=b3106;gene_synonym=ECK3097;gene_synonym=JW3077;codon_start=1;transl_table=11;product=redox-sensitive bicupin;protein_id=AAC76141.1;db_xref=GI:1789493;db_xref=ASAP:ABE-0010217;db_xref=UniProtKB/Swiss-Prot:P42624;db_xref=EcoGene:EG12750 EMBL gene 3255043 3255207 . + . ID=.6740;gene=yhaL;locus_tag=b3107;gene_synonym=ECK3098;gene_synonym=JW5517;db_xref=EcoGene:EG12751 EMBL CDS 3255043 3255207 . + 0 ID=.6741;gene=yhaL;locus_tag=b3107;gene_synonym=ECK3098;gene_synonym=JW5517;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC76142.2;db_xref=GI:87082211;db_xref=ASAP:ABE-0010219;db_xref=UniProtKB/Swiss-Prot:P42625;db_xref=EcoGene:EG12751 EMBL repeat_region 3255217 3255319 . + . ID=.6742;note=REP236 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 3255341 3256651 . - . ID=.6743;gene=yhaM;locus_tag=b4470;gene_synonym=ECK3099;gene_synonym=JW5518;gene_synonym=yhaN;db_xref=EcoGene:EG12752 EMBL CDS 3255341 3256651 . - 0 ID=.6744;gene=yhaM;locus_tag=b4470;gene_synonym=ECK3099;gene_synonym=JW5518;gene_synonym=yhaN;note=conserved hypothetical protein;codon_start=1;transl_table=11;product=putative L-serine dehydratase alpha chain;protein_id=AAT48167.1;db_xref=GI:48994923;db_xref=ASAP:ABE-0174100;db_xref=UniProtKB/Swiss-Prot:P42626;db_xref=EcoGene:EG12752 EMBL gene 3256679 3258010 . - . ID=.6745;gene=yhaO;locus_tag=b3110;gene_synonym=ECK3100;gene_synonym=JW5519;db_xref=EcoGene:EG12754 EMBL CDS 3256679 3258010 . - 0 ID=.6746;gene=yhaO;locus_tag=b3110;gene_synonym=ECK3100;gene_synonym=JW5519;function=putative transport%3B Not classified;note=putative transport system permease protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative transporter;protein_id=AAT48168.3;db_xref=GI:145693183;db_xref=ASAP:ABE-0010228;db_xref=UniProtKB/Swiss-Prot:P42628;db_xref=EcoGene:EG12754 EMBL gene 3258285 3259649 . - . ID=.6747;gene=tdcG;locus_tag=b4471;gene_synonym=ECK3101;gene_synonym=JW5520;gene_synonym=yhaP;gene_synonym=yhaQ;db_xref=EcoGene:EG12756 EMBL CDS 3258285 3259649 . - 0 ID=.6748;gene=tdcG;locus_tag=b4471;gene_synonym=ECK3101;gene_synonym=JW5520;gene_synonym=yhaP;gene_synonym=yhaQ;ec_number=4.3.1.17;note=L-serine dehydratase%3B GO_process: GO:0009063 - cellular amino acid catabolic process;codon_start=1;transl_table=11;product=L-serine dehydratase 3%2C anaerobic;protein_id=AAT48169.1;db_xref=GI:48994925;db_xref=ASAP:ABE-0174101;db_xref=UniProtKB/Swiss-Prot:P42630;db_xref=EcoGene:EG12756 EMBL gene 3259721 3260110 . - . ID=.6749;gene=tdcF;locus_tag=b3113;gene_synonym=ECK3102;gene_synonym=JW5521;gene_synonym=yhaR;db_xref=EcoGene:EG12757 EMBL CDS 3259721 3260110 . - 0 ID=.6750;gene=tdcF;locus_tag=b3113;gene_synonym=ECK3102;gene_synonym=JW5521;gene_synonym=yhaR;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=putative reactive intermediate deaminase;protein_id=AAC76148.2;db_xref=GI:87082213;db_xref=ASAP:ABE-0010240;db_xref=UniProtKB/Swiss-Prot:P0AGL2;db_xref=EcoGene:EG12757 EMBL gene 3260124 3262418 . - . ID=.6751;gene=tdcE;locus_tag=b3114;gene_synonym=ECK3103;gene_synonym=JW5522;gene_synonym=yhaS;db_xref=EcoGene:EG12758 EMBL CDS 3260124 3262418 . - 0 ID=.6752;gene=tdcE;locus_tag=b3114;gene_synonym=ECK3103;gene_synonym=JW5522;gene_synonym=yhaS;ec_number=2.3.1.54;function=putative enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;note=probable formate acetyltransferase 3%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009063 - cellular amino acid catabolic process%3B GO_process: GO:0006113 - fermentation%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=pyruvate formate-lyase 4/2-ketobutyrate formate-lyase;protein_id=AAT48170.1;db_xref=GI:48994926;db_xref=ASAP:ABE-0010242;db_xref=UniProtKB/Swiss-Prot:P42632;db_xref=EcoGene:EG12758 EMBL gene 3262452 3263660 . - . ID=.6753;gene=tdcD;locus_tag=b3115;gene_synonym=ECK3104;gene_synonym=JW5806;gene_synonym=yhaA;db_xref=EcoGene:EG11172 EMBL CDS 3262452 3263660 . - 0 ID=.6754;gene=tdcD;locus_tag=b3115;gene_synonym=ECK3104;gene_synonym=JW5806;gene_synonym=yhaA;ec_number=2.7.2.15;function=putative enzyme%3B Not classified;note=propionate kinase/acetate kinase II%2C anaerobic%3B GO_process: GO:0009063 - cellular amino acid catabolic process;codon_start=1;transl_table=11;product=propionate kinase/acetate kinase C%2C anaerobic;protein_id=AAC76150.2;db_xref=GI:145693184;db_xref=ASAP:ABE-0010245;db_xref=UniProtKB/Swiss-Prot:P11868;db_xref=EcoGene:EG11172 EMBL gene 3263686 3265017 . - . ID=.6755;gene=tdcC;locus_tag=b3116;gene_synonym=ECK3105;gene_synonym=JW3087;db_xref=EcoGene:EG10991 EMBL CDS 3263686 3265017 . - 0 ID=.6756;gene=tdcC;locus_tag=b3116;gene_synonym=ECK3105;gene_synonym=JW3087;function=transport%3B Transport of small molecules: Amino acids%2C amines;note=anaerobically inducible L-threonine%2C L-serine permease%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009088 - threonine biosynthetic process;codon_start=1;transl_table=11;product=L-threonine/L-serine transporter;protein_id=AAC76151.1;db_xref=GI:1789504;db_xref=ASAP:ABE-0010247;db_xref=UniProtKB/Swiss-Prot:P0AAD8;db_xref=EcoGene:EG10991 EMBL gene 3265039 3266028 . - . ID=.6757;gene=tdcB;locus_tag=b3117;gene_synonym=ECK3106;gene_synonym=JW3088;db_xref=EcoGene:EG10990 EMBL CDS 3265039 3266028 . - 0 ID=.6758;gene=tdcB;locus_tag=b3117;gene_synonym=ECK3106;gene_synonym=JW3088;ec_number=4.3.1.19;function=enzyme%3B Degradation of small molecules: Amino acids;experiment=N-terminus verified by Edman degradation: PMID 6751404;note=threonine dehydratase%2C catabolic%3B GO_process: GO:0009063 - cellular amino acid catabolic process;codon_start=1;transl_table=11;product=L-threonine dehydratase%2C catabolic;protein_id=AAC76152.1;db_xref=GI:1789505;db_xref=ASAP:ABE-0010249;db_xref=UniProtKB/Swiss-Prot:P0AGF6;db_xref=EcoGene:EG10990 EMBL gene 3266127 3267065 . - . ID=.6759;gene=tdcA;locus_tag=b3118;gene_synonym=ECK3107;gene_synonym=JW3089;db_xref=EcoGene:EG10989 EMBL CDS 3266127 3267065 . - 0 ID=.6760;gene=tdcA;locus_tag=b3118;gene_synonym=ECK3107;gene_synonym=JW3089;function=regulator%3B Degradation of small molecules: Amino acids;note=transcriptional activator of tdc operon%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0009063 - cellular amino acid catabolic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=tdc operon transcriptional activator;protein_id=AAC76153.1;db_xref=GI:1789506;db_xref=ASAP:ABE-0010252;db_xref=UniProtKB/Swiss-Prot:P0ACQ7;db_xref=EcoGene:EG10989 EMBL gene 3267380 3267598 . + . ID=.6761;gene=tdcR;locus_tag=b3119;gene_synonym=ECK3108;gene_synonym=JW5525;db_xref=EcoGene:EG10992 EMBL CDS 3267380 3267598 . + 0 ID=.6762;gene=tdcR;locus_tag=b3119;gene_synonym=ECK3108;gene_synonym=JW5525;function=regulator%3B Degradation of small molecules: Amino acids;note=threonine dehydratase operon activator protein%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0009063 - cellular amino acid catabolic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=L-threonine dehydratase operon activator protein;protein_id=AAC76154.2;db_xref=GI:87082214;db_xref=ASAP:ABE-0010255;db_xref=UniProtKB/Swiss-Prot:P11866;db_xref=EcoGene:EG10992 EMBL gene 3267854 3268393 . + . ID=.6763;gene=yhaB;locus_tag=b3120;gene_synonym=ECK3109;gene_synonym=JW3091;db_xref=EcoGene:EG11173 EMBL CDS 3267854 3268393 . + 0 ID=.6764;gene=yhaB;locus_tag=b3120;gene_synonym=ECK3109;gene_synonym=JW3091;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC76155.2;db_xref=GI:87082215;db_xref=ASAP:ABE-0010261;db_xref=UniProtKB/Swiss-Prot:P11865;db_xref=EcoGene:EG11173 EMBL gene 3268415 3269602 . + . ID=.6765;gene=yhaC;locus_tag=b3121;gene_synonym=ECK3110;gene_synonym=JW3092;db_xref=EcoGene:EG11174 EMBL CDS 3268415 3269602 . + 0 ID=.6766;gene=yhaC;locus_tag=b3121;gene_synonym=ECK3110;gene_synonym=JW3092;codon_start=1;transl_table=11;product=pentapetide repeats-related protein;protein_id=AAC76156.1;db_xref=GI:1789509;db_xref=ASAP:ABE-0010263;db_xref=UniProtKB/Swiss-Prot:P11864;db_xref=EcoGene:EG11174 EMBL repeat_region 3269722 3269819 . + . ID=.6767;note=RIP237 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 3270216 3270592 . - . ID=.6768;gene=rnpB;locus_tag=b3123;gene_synonym=ECK3111;gene_synonym=JWR0070;db_xref=EcoGene:EG30069 EMBL ncRNA 3270216 3270592 . - . ID=.6769;ncrna_class=RNase_P_RNA;gene=rnpB;locus_tag=b3123;gene_synonym=ECK3111;gene_synonym=JWR0070;product=RNase P%2C M1 RNA component;note=RNase P is an essential enzyme responsible for the processing of the 5' ends of precursors to tRNA%2C 4.5S RNA%2C and other naturally occurring stable RNA molecules%3B RNase P also affects gene expression of polycistronic operon mRNAs;function=1.2.1 metabolism%3B macromolecule degradation%3B RNA;function=2.2.3 information transfer%3B RNA related%3B RNA modification;function=enzyme%3B Degradation of RNA;db_xref=ASAP:ABE-0010269;db_xref=EcoGene:EG30069 EMBL gene 3270625 3271770 . - . ID=.6770;gene=garK;locus_tag=b3124;gene_synonym=ECK3112;gene_synonym=JW3093;gene_synonym=yhaD;db_xref=EcoGene:EG11175 EMBL CDS 3270625 3271770 . - 0 ID=.6771;gene=garK;locus_tag=b3124;gene_synonym=ECK3112;gene_synonym=JW3093;gene_synonym=yhaD;ec_number=2.7.1.165;note=GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=glycerate kinase I;protein_id=AAC76158.2;db_xref=GI:145693185;db_xref=ASAP:ABE-0010271;db_xref=UniProtKB/Swiss-Prot:P23524;db_xref=EcoGene:EG11175 EMBL gene 3271867 3272751 . - . ID=.6772;gene=garR;locus_tag=b3125;gene_synonym=ECK3113;gene_synonym=JW5526;gene_synonym=yhaE;db_xref=EcoGene:EG11176 EMBL CDS 3271867 3272751 . - 0 ID=.6773;gene=garR;locus_tag=b3125;gene_synonym=ECK3113;gene_synonym=JW5526;gene_synonym=yhaE;ec_number=1.1.1.60;note=tartronate semialdehyde reductase (TSAR)%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0009441 - glycolate metabolic process;codon_start=1;transl_table=11;product=tartronate semialdehyde reductase;protein_id=AAC76159.3;db_xref=GI:145693186;db_xref=ASAP:ABE-0010273;db_xref=UniProtKB/Swiss-Prot:P0ABQ2;db_xref=EcoGene:EG11176 EMBL gene 3272787 3273557 . - . ID=.6774;gene=garL;locus_tag=b3126;gene_synonym=ECK3114;gene_synonym=JW3095;gene_synonym=yhaF;db_xref=EcoGene:EG10016 EMBL CDS 3272787 3273557 . - 0 ID=.6775;gene=garL;locus_tag=b3126;gene_synonym=ECK3114;gene_synonym=JW3095;gene_synonym=yhaF;ec_number=4.1.2.20;experiment=N-terminus verified by Edman degradation: PMID 9772162;note=GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=alpha-dehydro-beta-deoxy-D-glucarate aldolase;protein_id=AAC76160.1;db_xref=GI:1789514;db_xref=ASAP:ABE-0010276;db_xref=UniProtKB/Swiss-Prot:P23522;db_xref=EcoGene:EG10016 EMBL gene 3273573 3274907 . - . ID=.6776;gene=garP;locus_tag=b3127;gene_synonym=ECK3115;gene_synonym=JW3096;gene_synonym=yhaU;db_xref=EcoGene:EG12760 EMBL CDS 3273573 3274907 . - 0 ID=.6777;gene=garP;locus_tag=b3127;gene_synonym=ECK3115;gene_synonym=JW3096;gene_synonym=yhaU;note=putative transport protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=putative (D)-galactarate transporter;protein_id=AAC76161.1;db_xref=GI:1789515;db_xref=ASAP:ABE-0010279;db_xref=UniProtKB/Swiss-Prot:P0AA80;db_xref=EcoGene:EG12760 EMBL gene 3275282 3276853 . + . ID=.6778;gene=garD;locus_tag=b3128;gene_synonym=ECK3116;gene_synonym=JW3097;gene_synonym=yhaG;db_xref=EcoGene:EG12522 EMBL CDS 3275282 3276853 . + 0 ID=.6779;gene=garD;locus_tag=b3128;gene_synonym=ECK3116;gene_synonym=JW3097;gene_synonym=yhaG;ec_number=4.2.1.42;note=GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=D-galactarate dehydrogenase;protein_id=AAC76162.1;db_xref=GI:1789516;db_xref=ASAP:ABE-0010284;db_xref=UniProtKB/Swiss-Prot:P39829;db_xref=EcoGene:EG12522 EMBL gene 3277002 3277337 . + . ID=.6780;gene=prlF;locus_tag=b3129;gene_synonym=ECK3117;gene_synonym=JW3098;gene_synonym=sohA;db_xref=EcoGene:EG10955 EMBL CDS 3277002 3277337 . + 0 ID=.6781;gene=prlF;locus_tag=b3129;gene_synonym=ECK3117;gene_synonym=JW3098;gene_synonym=sohA;function=putative enzyme%3B Not classified;note=putative protease%3B htrA suppressor protein;codon_start=1;transl_table=11;product=antitoxin of the SohA(PrlF)-YhaV toxin-antitoxin system;protein_id=AAC76163.1;db_xref=GI:1789517;db_xref=ASAP:ABE-0010287;db_xref=UniProtKB/Swiss-Prot:P15373;db_xref=EcoGene:EG10955 EMBL gene 3277337 3277801 . + . ID=.6782;gene=yhaV;locus_tag=b3130;gene_synonym=ECK3118;gene_synonym=JW3099;db_xref=EcoGene:EG12761 EMBL CDS 3277337 3277801 . + 0 ID=.6783;gene=yhaV;locus_tag=b3130;gene_synonym=ECK3118;gene_synonym=JW3099;codon_start=1;transl_table=11;product=toxin of the SohB(PrlF)-YhaV toxin-antitoxin system;protein_id=AAC76164.1;db_xref=GI:1789518;db_xref=ASAP:ABE-0010289;db_xref=UniProtKB/Swiss-Prot:P64594;db_xref=EcoGene:EG12761 EMBL repeat_region 3277819 3277847 . + . ID=.6784;note=REP238 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 3277856 3278665 . - . ID=.6785;gene=agaR;locus_tag=b3131;gene_synonym=ECK3119;gene_synonym=JW3100;gene_synonym=yhaW;db_xref=EcoGene:EG12762 EMBL CDS 3277856 3278665 . - 0 ID=.6786;gene=agaR;locus_tag=b3131;gene_synonym=ECK3119;gene_synonym=JW3100;gene_synonym=yhaW;function=regulator%3B Not classified;note=putative DEOR-type transcriptional regulator of aga operon%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0046349 - amino sugar biosynthetic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=transcriptional repressor of the aga regulon;protein_id=AAC76165.1;db_xref=GI:1789519;db_xref=ASAP:ABE-0010291;db_xref=UniProtKB/Swiss-Prot:P0ACK2;db_xref=EcoGene:EG12762 EMBL gene 3278914 3280194 . + . ID=.6787;gene=kbaZ;locus_tag=b3132;gene_synonym=agaZ;gene_synonym=ECK3120;gene_synonym=JW3101;gene_synonym=yhaX;db_xref=EcoGene:EG12763 EMBL CDS 3278914 3280194 . + 0 ID=.6788;gene=kbaZ;locus_tag=b3132;gene_synonym=agaZ;gene_synonym=ECK3120;gene_synonym=JW3101;gene_synonym=yhaX;ec_number=4.1.2.40;function=putative enzyme%3B Not classified;note=putative tagatose 6-phosphate kinase 2%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=tagatose 6-phosphate aldolase 1%2C kbaZ subunit;protein_id=AAC76166.1;db_xref=GI:1789520;db_xref=ASAP:ABE-0010295;db_xref=UniProtKB/Swiss-Prot:P0C8K0;db_xref=EcoGene:EG12763 EMBL gene 3280217 3280690 . + . ID=.6789;gene=agaV;locus_tag=b3133;gene_synonym=ECK3121;gene_synonym=JW3102;gene_synonym=yhaY;db_xref=EcoGene:EG12764 EMBL CDS 3280217 3280690 . + 0 ID=.6790;gene=agaV;locus_tag=b3133;gene_synonym=ECK3121;gene_synonym=JW3102;gene_synonym=yhaY;ec_number=2.7.1.69;function=enzyme%3B Central intermediary metabolism: Amino sugars;note=PTS system%2C cytoplasmic%2C N-acetylgalactosamine-specific IIB component 2 (EIIB-AGA)%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0046349 - amino sugar biosynthetic process;codon_start=1;transl_table=11;product=N-acetylgalactosamine-specific enzyme IIB component of PTS;protein_id=AAC76167.2;db_xref=GI:87082217;db_xref=ASAP:ABE-0010297;db_xref=UniProtKB/Swiss-Prot:P42904;db_xref=EcoGene:EG12764 EMBL gene 3280701 3281075 . + . ID=.6791;gene=agaW;locus_tag=b3134;gene_synonym=ECK3122;gene_synonym=JW3103;gene_synonym=yhaZ;pseudo=true;db_xref=EcoGene:EG12765 EMBL CDS 3280701 3281075 . + 0 ID=.6792;gene=agaW;locus_tag=b3134;gene_synonym=ECK3122;gene_synonym=JW3103;gene_synonym=yhaZ;note=pseudogene%2C N-acetylgalactosamine-specific enzyme IIC component of PTS%3Benzyme%3B Central intermediary metabolism: Amino sugars%3B PTS system N-acetylgalactosameine-specific IIC component 2%3B GO_process: GO:0046349 - amino sugar biosynthetic process;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0010299;db_xref=UniProtKB/Swiss-Prot:P42905;db_xref=EcoGene:EG12765 EMBL gene 3281071 3281625 . + . ID=.6793;gene=agaA;locus_tag=b3135;gene_synonym=ECK3123;gene_synonym=JW5527;gene_synonym=yraA;pseudo=true;db_xref=EcoGene:EG12766 EMBL CDS 3281071 3281625 . + 0 ID=.6794;gene=agaA;locus_tag=b3135;gene_synonym=ECK3123;gene_synonym=JW5527;gene_synonym=yraA;note=pseudogene%2C N-acetylgalactosamine-6-phosphate deacetylase fragment%3B putative N-acetylgalactosamine-6-phosphate deacetylase;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0010302;db_xref=UniProtKB/Swiss-Prot:P42906;db_xref=EcoGene:EG12766 EMBL repeat_region 3281702 3281783 . + . ID=.6795;note=REP239 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 3281976 3283130 . + . ID=.6796;gene=agaS;locus_tag=b3136;gene_synonym=ECK3124;gene_synonym=JW3105;gene_synonym=yraB;db_xref=EcoGene:EG12767 EMBL CDS 3281976 3283130 . + 0 ID=.6797;gene=agaS;locus_tag=b3136;gene_synonym=ECK3124;gene_synonym=JW3105;gene_synonym=yraB;function=putative enzyme%3B Not classified;note=putative tagatose-6-phosphate aldose/ketose isomerase;codon_start=1;transl_table=11;product=tagatose-6-phosphate ketose/aldose isomerase;protein_id=AAC76170.1;db_xref=GI:1789525;db_xref=ASAP:ABE-0010305;db_xref=UniProtKB/Swiss-Prot:P42907;db_xref=EcoGene:EG12767 EMBL gene 3283143 3284003 . + . ID=.6798;gene=kbaY;locus_tag=b3137;gene_synonym=agaY;gene_synonym=ECK3125;gene_synonym=JW3106;gene_synonym=kba;gene_synonym=yraC;db_xref=EcoGene:EG12768 EMBL CDS 3283143 3284003 . + 0 ID=.6799;gene=kbaY;locus_tag=b3137;gene_synonym=agaY;gene_synonym=ECK3125;gene_synonym=JW3106;gene_synonym=kba;gene_synonym=yraC;ec_number=4.1.2.40;function=enzyme%3B Central intermediary metabolism: Pool%2C multipurpose conversions;note=tagatose-bisphosphate aldolase 2%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=tagatose 6-phosphate aldolase 1%2C kbaY subunit;protein_id=AAC76171.1;db_xref=GI:1789526;db_xref=ASAP:ABE-0010307;db_xref=UniProtKB/Swiss-Prot:P0AB74;db_xref=EcoGene:EG12768 EMBL gene 3284170 3284646 . + . ID=.6800;gene=agaB;locus_tag=b3138;gene_synonym=ECK3126;gene_synonym=JW3107;gene_synonym=yraD;db_xref=EcoGene:EG12769 EMBL CDS 3284170 3284646 . + 0 ID=.6801;gene=agaB;locus_tag=b3138;gene_synonym=ECK3126;gene_synonym=JW3107;gene_synonym=yraD;ec_number=2.7.1.69;function=enzyme%3B Central intermediary metabolism: Amino sugars;note=PTS system%2C cytoplasmic%2C N-acetylgalactosamine-specific IIB component 1 (EIIB-AGA)%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=N-acetylgalactosamine-specific enzyme IIB component of PTS;protein_id=AAC76172.1;db_xref=GI:1789527;db_xref=ASAP:ABE-0010310;db_xref=UniProtKB/Swiss-Prot:P42909;db_xref=EcoGene:EG12769 EMBL gene 3284685 3285488 . + . ID=.6802;gene=agaC;locus_tag=b3139;gene_synonym=ECK3127;gene_synonym=JW3108;gene_synonym=yraE;db_xref=EcoGene:EG12770 EMBL CDS 3284685 3285488 . + 0 ID=.6803;gene=agaC;locus_tag=b3139;gene_synonym=ECK3127;gene_synonym=JW3108;gene_synonym=yraE;ec_number=2.7.1.69;function=enzyme%3B Central intermediary metabolism: Amino sugars;note=PTS system N-acetylgalactosamine-specific IIC component 1;codon_start=1;transl_table=11;product=N-acetylgalactosamine-specific enzyme IIC component of PTS;protein_id=AAC76173.1;db_xref=GI:1789528;db_xref=ASAP:ABE-0010312;db_xref=UniProtKB/Swiss-Prot:P42910;db_xref=EcoGene:EG12770 EMBL gene 3285478 3286269 . + . ID=.6804;gene=agaD;locus_tag=b3140;gene_synonym=ECK3128;gene_synonym=JW3109;gene_synonym=yraF;db_xref=EcoGene:EG12771 EMBL CDS 3285478 3286269 . + 0 ID=.6805;gene=agaD;locus_tag=b3140;gene_synonym=ECK3128;gene_synonym=JW3109;gene_synonym=yraF;ec_number=2.7.1.69;function=enzyme%3B Central intermediary metabolism: Amino sugars;note=PTS system%2C N-acetylglucosamine enzyme IID component 1%3B GO_process: GO:0046349 - amino sugar biosynthetic process;codon_start=1;transl_table=11;product=N-acetylgalactosamine-specific enzyme IID component of PTS;protein_id=AAC76174.1;db_xref=GI:1789529;db_xref=ASAP:ABE-0010314;db_xref=UniProtKB/Swiss-Prot:P42911;db_xref=EcoGene:EG12771 EMBL gene 3286270 3287025 . + . ID=.6806;gene=agaI;locus_tag=b3141;gene_synonym=ECK3129;gene_synonym=JW3110;gene_synonym=yraG;db_xref=EcoGene:EG12772 EMBL CDS 3286270 3287025 . + 0 ID=.6807;gene=agaI;locus_tag=b3141;gene_synonym=ECK3129;gene_synonym=JW3110;gene_synonym=yraG;function=putative enzyme%3B Not classified;note=putative galactosamine-6-phosphate isomerase;codon_start=1;transl_table=11;product=galactosamine-6-phosphate isomerase;protein_id=AAC76175.1;db_xref=GI:1789530;db_xref=ASAP:ABE-0010317;db_xref=UniProtKB/Swiss-Prot:P42912;db_xref=EcoGene:EG12772 EMBL gene 3287426 3288010 . + . ID=.6808;gene=yraH;locus_tag=b3142;gene_synonym=ECK3130;gene_synonym=JW3111;db_xref=EcoGene:EG12773 EMBL CDS 3287426 3288010 . + 0 ID=.6809;gene=yraH;locus_tag=b3142;gene_synonym=ECK3130;gene_synonym=JW3111;function=putative structural component%3B Surface structures;note=putative fimbrial-like protein%3B GO_component: GO:0009289 - pilus;codon_start=1;transl_table=11;product=putative fimbrial-like adhesin protein;protein_id=AAC76176.1;db_xref=GI:1789531;db_xref=ASAP:ABE-0010325;db_xref=UniProtKB/Swiss-Prot:P42913;db_xref=EcoGene:EG12773 EMBL gene 3288090 3288785 . + . ID=.6810;gene=yraI;locus_tag=b3143;gene_synonym=ECK3131;gene_synonym=JW3112;db_xref=EcoGene:EG12774 EMBL CDS 3288090 3288785 . + 0 ID=.6811;gene=yraI;locus_tag=b3143;gene_synonym=ECK3131;gene_synonym=JW3112;function=putative factor%3B Surface structures;note=putative chaperone%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=putative periplasmic pilin chaperone;protein_id=AAC76177.1;db_xref=GI:1789532;db_xref=ASAP:ABE-0010331;db_xref=UniProtKB/Swiss-Prot:P42914;db_xref=EcoGene:EG12774 EMBL gene 3288814 3291330 . + . ID=.6812;gene=yraJ;locus_tag=b3144;gene_synonym=ECK3132;gene_synonym=JW3113;db_xref=EcoGene:EG12775 EMBL CDS 3288814 3291330 . + 0 ID=.6813;gene=yraJ;locus_tag=b3144;gene_synonym=ECK3132;gene_synonym=JW3113;function=putative membrane%3B Not classified;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane;codon_start=1;transl_table=11;product=putative outer membrane protein;protein_id=AAC76178.1;db_xref=GI:1789533;db_xref=ASAP:ABE-0010333;db_xref=UniProtKB/Swiss-Prot:P42915;db_xref=EcoGene:EG12775 EMBL gene 3291341 3292432 . + . ID=.6814;gene=yraK;locus_tag=b3145;gene_synonym=ECK3133;gene_synonym=JW3114;db_xref=EcoGene:EG12776 EMBL CDS 3291341 3292432 . + 0 ID=.6815;gene=yraK;locus_tag=b3145;gene_synonym=ECK3133;gene_synonym=JW3114;function=putative structural component%3B Surface structures;note=putative fimbrial protein%3B GO_component: GO:0009289 - pilus;codon_start=1;transl_table=11;product=putative fimbrial-like adhesin protein;protein_id=AAC76179.1;db_xref=GI:1789534;db_xref=ASAP:ABE-0010335;db_xref=UniProtKB/Swiss-Prot:P43319;db_xref=EcoGene:EG12776 EMBL gene 3292475 3293335 . - . ID=.6816;gene=rsmI;locus_tag=b3146;gene_synonym=ECK3134;gene_synonym=JW3115;gene_synonym=yraL;db_xref=EcoGene:EG12777 EMBL CDS 3292475 3293335 . - 0 ID=.6817;gene=rsmI;locus_tag=b3146;gene_synonym=ECK3134;gene_synonym=JW3115;gene_synonym=yraL;function=enzyme%3B rRNA modification;codon_start=1;transl_table=11;product=16S rRNA C1402 2'-O-ribose methyltransferase%2C SAM-dependent;protein_id=AAC76180.1;db_xref=GI:1789535;db_xref=ASAP:ABE-0010337;db_xref=UniProtKB/Swiss-Prot:P67087;db_xref=EcoGene:EG12777 EMBL gene 3293400 3295436 . + . ID=.6818;gene=lpoA;locus_tag=b3147;gene_synonym=ECK3135;gene_synonym=JW3116;gene_synonym=yraM;db_xref=EcoGene:EG12778 EMBL CDS 3293400 3295436 . + 0 ID=.6819;gene=lpoA;locus_tag=b3147;gene_synonym=ECK3135;gene_synonym=JW3116;gene_synonym=yraM;function=factor%3B Not classified;note=putative glycosylase;codon_start=1;transl_table=11;product=OM lipoprotein stimulator of MrcA transpeptidase;protein_id=AAC76181.1;db_xref=GI:1789537;db_xref=ASAP:ABE-0010343;db_xref=UniProtKB/Swiss-Prot:P45464;db_xref=EcoGene:EG12778 EMBL gene 3295394 3295789 . + . ID=.6820;gene=yraN;locus_tag=b3148;gene_synonym=ECK3136;gene_synonym=JW3117;db_xref=EcoGene:EG12779 EMBL CDS 3295394 3295789 . + 0 ID=.6821;gene=yraN;locus_tag=b3148;gene_synonym=ECK3136;gene_synonym=JW3117;codon_start=1;transl_table=11;product=UPF0102 family protein;protein_id=AAC76182.1;db_xref=GI:1789538;db_xref=ASAP:ABE-0010346;db_xref=UniProtKB/Swiss-Prot:P45465;db_xref=EcoGene:EG12779 EMBL gene 3295809 3296399 . + . ID=.6822;gene=diaA;locus_tag=b3149;gene_synonym=ECK3137;gene_synonym=JW3118;gene_synonym=yraO;db_xref=EcoGene:EG12780 EMBL CDS 3295809 3296399 . + 0 ID=.6823;gene=diaA;locus_tag=b3149;gene_synonym=ECK3137;gene_synonym=JW3118;gene_synonym=yraO;codon_start=1;transl_table=11;product=DnaA initiator-associating factor for replication initiation;protein_id=AAC76183.1;db_xref=GI:1789539;db_xref=ASAP:ABE-0010348;db_xref=UniProtKB/Swiss-Prot:P66817;db_xref=EcoGene:EG12780 EMBL gene 3296409 3296984 . + . ID=.6824;gene=yraP;locus_tag=b3150;gene_synonym=ecfH;gene_synonym=ECK3138;gene_synonym=JW3119;db_xref=EcoGene:EG12781 EMBL CDS 3296409 3296984 . + 0 ID=.6825;gene=yraP;locus_tag=b3150;gene_synonym=ecfH;gene_synonym=ECK3138;gene_synonym=JW3119;function=putative transport%3B Not classified;note=putative periplasmic protein%3B GO_component: GO:0042597 - periplasmic space;codon_start=1;transl_table=11;product=outer membrane lipoprotein;protein_id=AAC76184.1;db_xref=GI:1789540;db_xref=ASAP:ABE-0010350;db_xref=UniProtKB/Swiss-Prot:P64596;db_xref=EcoGene:EG12781 EMBL repeat_region 3296999 3297082 . + . ID=.6826;note=REP240 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 3297098 3298138 . - . ID=.6827;gene=yraQ;locus_tag=b3151;gene_synonym=ECK3139;gene_synonym=JW3120;db_xref=EcoGene:EG12782 EMBL CDS 3297098 3298138 . - 0 ID=.6828;gene=yraQ;locus_tag=b3151;gene_synonym=ECK3139;gene_synonym=JW3120;codon_start=1;transl_table=11;product=putative inner membrane permease;protein_id=AAC76185.1;db_xref=GI:1789541;db_xref=ASAP:ABE-0010353;db_xref=UniProtKB/Swiss-Prot:P45468;db_xref=EcoGene:EG12782 EMBL gene 3298211 3298846 . - . ID=.6829;gene=yraR;locus_tag=b3152;gene_synonym=ECK3140;gene_synonym=JW5528;db_xref=EcoGene:EG12783 EMBL CDS 3298211 3298846 . - 0 ID=.6830;gene=yraR;locus_tag=b3152;gene_synonym=ECK3140;gene_synonym=JW5528;codon_start=1;transl_table=11;product=putative nucleoside-diphosphate-sugar epimerase;protein_id=AAC76186.2;db_xref=GI:87082218;db_xref=ASAP:ABE-0010356;db_xref=UniProtKB/Swiss-Prot:P45469;db_xref=EcoGene:EG12783 EMBL gene 3298974 3299492 . + . ID=.6831;gene=yhbO;locus_tag=b3153;gene_synonym=ECK3141;gene_synonym=JW5529;db_xref=EcoGene:EG12784 EMBL CDS 3298974 3299492 . + 0 ID=.6832;gene=yhbO;locus_tag=b3153;gene_synonym=ECK3141;gene_synonym=JW5529;codon_start=1;transl_table=11;product=stress-resistance protein;protein_id=AAC76187.2;db_xref=GI:87082219;db_xref=ASAP:ABE-0010361;db_xref=UniProtKB/Swiss-Prot:P45470;db_xref=EcoGene:EG12784 EMBL gene 3299472 3299915 . - . ID=.6833;gene=yhbP;locus_tag=b3154;gene_synonym=ECK3142;gene_synonym=JW3123;db_xref=EcoGene:EG12785 EMBL CDS 3299472 3299915 . - 0 ID=.6834;gene=yhbP;locus_tag=b3154;gene_synonym=ECK3142;gene_synonym=JW3123;codon_start=1;transl_table=11;product=UPF0306 family protein;protein_id=AAC76188.1;db_xref=GI:1789544;db_xref=ASAP:ABE-0010363;db_xref=UniProtKB/Swiss-Prot:P67762;db_xref=EcoGene:EG12785 EMBL gene 3299966 3300268 . + . ID=.6835;gene=yhbQ;locus_tag=b3155;gene_synonym=ECK3143;gene_synonym=JW3124;db_xref=EcoGene:EG12786 EMBL CDS 3299966 3300268 . + 0 ID=.6836;gene=yhbQ;locus_tag=b3155;gene_synonym=ECK3143;gene_synonym=JW3124;codon_start=1;transl_table=11;product=GIY-YIG nuclease superfamily protein;protein_id=AAC76189.1;db_xref=GI:1789545;db_xref=ASAP:ABE-0010370;db_xref=UniProtKB/Swiss-Prot:P45472;db_xref=EcoGene:EG12786 EMBL gene 3300255 3300758 . - . ID=.6837;gene=yhbS;locus_tag=b3156;gene_synonym=ECK3144;gene_synonym=JW3125;db_xref=EcoGene:EG12788 EMBL CDS 3300255 3300758 . - 0 ID=.6838;gene=yhbS;locus_tag=b3156;gene_synonym=ECK3144;gene_synonym=JW3125;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=GNAT family putative N-acetyltransferase;protein_id=AAC76190.1;db_xref=GI:1789546;db_xref=ASAP:ABE-0010373;db_xref=UniProtKB/Swiss-Prot:P63417;db_xref=EcoGene:EG12788 EMBL gene 3300752 3301276 . - . ID=.6839;gene=yhbT;locus_tag=b3157;gene_synonym=ECK3145;gene_synonym=JW3126;db_xref=EcoGene:EG12789 EMBL CDS 3300752 3301276 . - 0 ID=.6840;gene=yhbT;locus_tag=b3157;gene_synonym=ECK3145;gene_synonym=JW3126;codon_start=1;transl_table=11;product=SCP-2 sterol transfer family protein;protein_id=AAC76191.1;db_xref=GI:1789547;db_xref=ASAP:ABE-0010375;db_xref=UniProtKB/Swiss-Prot:P64599;db_xref=EcoGene:EG12789 EMBL gene 3301485 3302480 . + . ID=.6841;gene=yhbU;locus_tag=b3158;gene_synonym=ECK3146;gene_synonym=JW3127;db_xref=EcoGene:EG12790 EMBL CDS 3301485 3302480 . + 0 ID=.6842;gene=yhbU;locus_tag=b3158;gene_synonym=ECK3146;gene_synonym=JW3127;function=orf%3B Not classified;note=putative collagenase;codon_start=1;transl_table=11;product=U32 peptidase family protein;protein_id=AAC76192.1;db_xref=GI:1789548;db_xref=ASAP:ABE-0010380;db_xref=UniProtKB/Swiss-Prot:P45527;db_xref=EcoGene:EG12790 EMBL gene 3302489 3303367 . + . ID=.6843;gene=yhbV;locus_tag=b3159;gene_synonym=ECK3147;gene_synonym=JW5530;db_xref=EcoGene:EG12791 EMBL CDS 3302489 3303367 . + 0 ID=.6844;gene=yhbV;locus_tag=b3159;gene_synonym=ECK3147;gene_synonym=JW5530;codon_start=1;transl_table=11;product=U32 peptidase family protein;protein_id=AAC76193.2;db_xref=GI:87082220;db_xref=ASAP:ABE-0010382;db_xref=UniProtKB/Swiss-Prot:P45475;db_xref=EcoGene:EG12791 EMBL gene 3303448 3304455 . + . ID=.6845;gene=yhbW;locus_tag=b3160;gene_synonym=ECK3148;gene_synonym=JW3129;db_xref=EcoGene:EG12792 EMBL CDS 3303448 3304455 . + 0 ID=.6846;gene=yhbW;locus_tag=b3160;gene_synonym=ECK3148;gene_synonym=JW3129;function=putative enzyme%3B Not classified;note=putative enzyme;codon_start=1;transl_table=11;product=putative luciferase-like monooxygenase;protein_id=AAC76194.1;db_xref=GI:1789551;db_xref=ASAP:ABE-0010385;db_xref=UniProtKB/Swiss-Prot:P0ADV5;db_xref=EcoGene:EG12792 EMBL repeat_region 3304504 3304532 . + . ID=.6847;note=REP241 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 3304573 3305817 . - . ID=.6848;gene=mtr;locus_tag=b3161;gene_synonym=ECK3149;gene_synonym=JW3130;db_xref=EcoGene:EG10617 EMBL CDS 3304573 3305817 . - 0 ID=.6849;gene=mtr;locus_tag=b3161;gene_synonym=ECK3149;gene_synonym=JW3130;function=transport%3B Transport of small molecules: Amino acids%2C amines;note=tryptophan-specific transport protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0000162 - tryptophan biosynthetic process;codon_start=1;transl_table=11;product=tryptophan transporter of high affinity;protein_id=AAC76195.1;db_xref=GI:1789552;db_xref=ASAP:ABE-0010387;db_xref=UniProtKB/Swiss-Prot:P0AAD2;db_xref=EcoGene:EG10617 EMBL gene 3305971 3307860 . - . ID=.6850;gene=deaD;locus_tag=b3162;gene_synonym=csdA;gene_synonym=ECK3150;gene_synonym=JW5531;gene_synonym=mssB;gene_synonym=rhlD;db_xref=EcoGene:EG10215 EMBL CDS 3305971 3307860 . - 0 ID=.6851;gene=deaD;locus_tag=b3162;gene_synonym=csdA;gene_synonym=ECK3150;gene_synonym=JW5531;gene_synonym=mssB;gene_synonym=rhlD;function=enzyme%3B RNA synthesis%2C modification%2C DNA transcription;note=inducible ATP-independent RNA helicase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009451 - RNA modification;codon_start=1;transl_table=11;product=ATP-dependent RNA helicase;protein_id=AAC76196.2;db_xref=GI:87082221;db_xref=ASAP:ABE-0010392;db_xref=UniProtKB/Swiss-Prot:P0A9P6;db_xref=EcoGene:EG10215 EMBL gene 3307853 3307933 . - . ID=.6852;gene=yrbN;locus_tag=b4685;gene_synonym=ECK4500;db_xref=EcoGene:EG14490 EMBL CDS 3307853 3307933 . - 0 ID=.6853;gene=yrbN;locus_tag=b4685;gene_synonym=ECK4500;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=ACO60010.1;db_xref=GI:226510977;db_xref=UniProtKB/Swiss-Prot:C1P618;db_xref=EcoGene:EG14490 EMBL gene 3308040 3308924 . - . ID=.6854;gene=nlpI;locus_tag=b3163;gene_synonym=ECK3151;gene_synonym=JW3132;gene_synonym=yhbM;db_xref=EcoGene:EG12371 EMBL CDS 3308040 3308924 . - 0 ID=.6855;gene=nlpI;locus_tag=b3163;gene_synonym=ECK3151;gene_synonym=JW3132;gene_synonym=yhbM;function=putative regulator%3B Not classified;codon_start=1;transl_table=11;product=lipoprotein involved in osmotic sensitivity and filamentation;protein_id=AAC76197.1;db_xref=GI:1789554;db_xref=ASAP:ABE-0010395;db_xref=UniProtKB/Swiss-Prot:P0AFB1;db_xref=EcoGene:EG12371 EMBL gene 3309033 3311168 . - . ID=.6856;gene=pnp;locus_tag=b3164;gene_synonym=bfl;gene_synonym=ECK3152;gene_synonym=JW5851;db_xref=EcoGene:EG10743 EMBL CDS 3309033 3311168 . - 0 ID=.6857;gene=pnp;locus_tag=b3164;gene_synonym=bfl;gene_synonym=ECK3152;gene_synonym=JW5851;ec_number=2.7.7.8;function=enzyme%3B RNA synthesis%2C modification%2C DNA transcription;experiment=N-terminus verified by Edman degradation: PMID 9298646;note=polynucleotide phosphorylase%3B cytidylate kinase activity%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006401 - RNA catabolic process;codon_start=1;transl_table=11;product=polynucleotide phosphorylase/polyadenylase;protein_id=AAC76198.2;db_xref=GI:145693187;db_xref=ASAP:ABE-0010397;db_xref=UniProtKB/Swiss-Prot:P05055;db_xref=EcoGene:EG10743 EMBL gene 3311225 3311398 . + . ID=.6858;gene=psrO;locus_tag=b4449;gene_synonym=ECK3153;gene_synonym=JWR0253;gene_synonym=p3;gene_synonym=psrA15;gene_synonym=sraG;db_xref=EcoGene:EG31162 EMBL ncRNA 3311225 3311398 . + . ID=.6859;ncrna_class=other;gene=psrO;locus_tag=b4449;gene_synonym=ECK3153;gene_synonym=JWR0253;gene_synonym=p3;gene_synonym=psrA15;gene_synonym=sraG;product=novel sRNA%2C function unknown;note=identified in a large scale screen;db_xref=ASAP:ABE-0047269;db_xref=EcoGene:EG31162 EMBL gene 3311415 3311684 . - . ID=.6860;gene=rpsO;locus_tag=b3165;gene_synonym=ECK3154;gene_synonym=JW3134;gene_synonym=secC;db_xref=EcoGene:EG10914 EMBL CDS 3311415 3311684 . - 0 ID=.6861;gene=rpsO;locus_tag=b3165;gene_synonym=ECK3154;gene_synonym=JW3134;gene_synonym=secC;function=structural component%3B Ribosomal proteins - synthesis%2C modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0003735 - structural constituent of ribosome%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=30S ribosomal subunit protein S15;protein_id=AAC76199.1;db_xref=GI:1789556;db_xref=ASAP:ABE-0010401;db_xref=UniProtKB/Swiss-Prot:P0ADZ4;db_xref=EcoGene:EG10914 EMBL gene 3311833 3312777 . - . ID=.6862;gene=truB;locus_tag=b3166;gene_synonym=ECK3155;gene_synonym=JW3135;gene_synonym=yhbA;db_xref=EcoGene:EG11177 EMBL CDS 3311833 3312777 . - 0 ID=.6863;gene=truB;locus_tag=b3166;gene_synonym=ECK3155;gene_synonym=JW3135;gene_synonym=yhbA;ec_number=4.2.1.70;function=enzyme%3B tRNA modification;note=tRNA pseudouridine 5S synthase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009451 - RNA modification;codon_start=1;transl_table=11;product=tRNA pseudouridine synthase B: tRNA pseudouridine(55) synthase and putative tmRNA pseudouridine(342) synthase;protein_id=AAC76200.1;db_xref=GI:2367200;db_xref=ASAP:ABE-0010404;db_xref=UniProtKB/Swiss-Prot:P60340;db_xref=EcoGene:EG11177 EMBL gene 3312777 3313178 . - . ID=.6864;gene=rbfA;locus_tag=b3167;gene_synonym=ECK3156;gene_synonym=JW3136;gene_synonym=sdr-43;gene_synonym=yhbB;db_xref=EcoGene:EG11178 EMBL CDS 3312777 3313178 . - 0 ID=.6865;gene=rbfA;locus_tag=b3167;gene_synonym=ECK3156;gene_synonym=JW3136;gene_synonym=sdr-43;gene_synonym=yhbB;function=factor%3B Proteins - translation and modification;note=ribosome-binding factor A%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009451 - RNA modification;codon_start=1;transl_table=11;product=30s ribosome binding factor;protein_id=AAC76201.1;db_xref=GI:1789558;db_xref=ASAP:ABE-0010406;db_xref=UniProtKB/Swiss-Prot:P0A7G2;db_xref=EcoGene:EG11178 EMBL repeat_region 3313252 3313328 . + . ID=.6866;note=REP242 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 3313342 3316014 . - . ID=.6867;gene=infB;locus_tag=b3168;gene_synonym=ECK3157;gene_synonym=gicD;gene_synonym=JW3137;gene_synonym=ssyG;db_xref=EcoGene:EG10505 EMBL CDS 3313342 3316014 . - 0 ID=.6868;gene=infB;locus_tag=b3168;gene_synonym=ECK3157;gene_synonym=gicD;gene_synonym=JW3137;gene_synonym=ssyG;function=factor%3B Proteins - translation and modification;experiment=N-terminus verified by Edman degradation: PMID 3894004;note=protein chain initiation factor IF-2%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=translation initiation factor IF-2;protein_id=AAC76202.1;db_xref=GI:1789559;db_xref=ASAP:ABE-0010410;db_xref=UniProtKB/Swiss-Prot:P0A705;db_xref=EcoGene:EG10505 EMBL gene 3316039 3317526 . - . ID=.6869;gene=nusA;locus_tag=b3169;gene_synonym=ECK3158;gene_synonym=JW3138;db_xref=EcoGene:EG10665 EMBL CDS 3316039 3317526 . - 0 ID=.6870;gene=nusA;locus_tag=b3169;gene_synonym=ECK3158;gene_synonym=JW3138;function=factor%3B RNA synthesis%2C modification%2C DNA transcription;experiment=N-terminus verified by Edman degradation: PMID 1847365%2C6364142%2C9298646;note=transcription pausing%3B L factor%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006350 - transcription%3B GO_process: GO:0006355 - regulation of transcription%2C DNA-dependent;codon_start=1;transl_table=11;product=transcription termination/antitermination L factor;protein_id=AAC76203.1;db_xref=GI:1789560;db_xref=ASAP:ABE-0010413;db_xref=UniProtKB/Swiss-Prot:P0AFF6;db_xref=EcoGene:EG10665 EMBL gene 3317554 3318006 . - . ID=.6871;gene=rimP;locus_tag=b3170;gene_synonym=ECK3159;gene_synonym=JW5533;gene_synonym=yhbC;db_xref=EcoGene:EG11179 EMBL CDS 3317554 3318006 . - 0 ID=.6872;gene=rimP;locus_tag=b3170;gene_synonym=ECK3159;gene_synonym=JW5533;gene_synonym=yhbC;codon_start=1;transl_table=11;product=ribosome maturation factor for 30S subunits;protein_id=AAC76204.4;db_xref=GI:226510978;db_xref=ASAP:ABE-0010417;db_xref=UniProtKB/Swiss-Prot:P0A8A8;db_xref=EcoGene:EG11179 EMBL gene 3318213 3318289 . - . ID=.6873;gene=metY;locus_tag=b3171;gene_synonym=ECK3160;gene_synonym=JWR0071;db_xref=EcoGene:EG30061 EMBL tRNA 3318213 3318289 . - . ID=.6874;gene=metY;locus_tag=b3171;gene_synonym=ECK3160;gene_synonym=JWR0071;product=tRNA-Met;note=anticodon: CAU;db_xref=ASAP:ABE-0010420;db_xref=EcoGene:EG30061 EMBL gene 3318637 3319980 . + . ID=.6875;gene=argG;locus_tag=b3172;gene_synonym=Arg6;gene_synonym=argE;gene_synonym=ECK3161;gene_synonym=JW3140;db_xref=EcoGene:EG10068 EMBL CDS 3318637 3319980 . + 0 ID=.6876;gene=argG;locus_tag=b3172;gene_synonym=Arg6;gene_synonym=argE;gene_synonym=ECK3161;gene_synonym=JW3140;ec_number=6.3.4.5;function=enzyme%3B Amino acid biosynthesis: Arginine;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006526 - arginine biosynthetic process;codon_start=1;transl_table=11;product=argininosuccinate synthetase;protein_id=AAC76205.1;db_xref=GI:1789563;db_xref=ASAP:ABE-0010428;db_xref=UniProtKB/Swiss-Prot:P0A6E4;db_xref=EcoGene:EG10068 EMBL gene 3319988 3321613 . - . ID=.6877;gene=yhbX;locus_tag=b3173;gene_synonym=ECK3162;gene_synonym=JW5534;db_xref=EcoGene:EG12793 EMBL CDS 3319988 3321613 . - 0 ID=.6878;gene=yhbX;locus_tag=b3173;gene_synonym=ECK3162;gene_synonym=JW5534;function=putative enzyme%3B Not classified;note=putative alkaline phosphatase I%3B GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=putative EptAB family phosphoethanolamine transferase%2C inner membrane protein;protein_id=AAC76206.2;db_xref=GI:87082223;db_xref=ASAP:ABE-0010430;db_xref=UniProtKB/Swiss-Prot:P42640;db_xref=EcoGene:EG12793 EMBL gene 3322072 3322158 . - . ID=.6879;gene=leuU;locus_tag=b3174;gene_synonym=ECK3163;gene_synonym=JWR0072;db_xref=EcoGene:EG30050 EMBL tRNA 3322072 3322158 . - . ID=.6880;gene=leuU;locus_tag=b3174;gene_synonym=ECK3163;gene_synonym=JWR0072;product=tRNA-Leu;note=anticodon: UAG;db_xref=ASAP:ABE-0010434;db_xref=EcoGene:EG30050 EMBL gene 3322173 3322505 . - . ID=.6881;gene=secG;locus_tag=b3175;gene_synonym=ECK3164;gene_synonym=JW3142;gene_synonym=prlH;db_xref=EcoGene:EG12095 EMBL CDS 3322173 3322505 . - 0 ID=.6882;gene=secG;locus_tag=b3175;gene_synonym=ECK3164;gene_synonym=JW3142;gene_synonym=prlH;function=transport%3B Protein%2C peptide secretion;note=protein export - membrane protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=preprotein translocase membrane subunit;protein_id=AAC76207.1;db_xref=GI:1789565;db_xref=ASAP:ABE-0010436;db_xref=UniProtKB/Swiss-Prot:P0AG99;db_xref=EcoGene:EG12095 EMBL gene 3322733 3324070 . - . ID=.6883;gene=glmM;locus_tag=b3176;gene_synonym=ECK3165;gene_synonym=JW3143;gene_synonym=mrsA;gene_synonym=yhbF;db_xref=EcoGene:EG11553 EMBL CDS 3322733 3324070 . - 0 ID=.6884;gene=glmM;locus_tag=b3176;gene_synonym=ECK3165;gene_synonym=JW3143;gene_synonym=mrsA;gene_synonym=yhbF;ec_number=5.4.2.10;function=putative enzyme%3B Central intermediary metabolism: Miscellaneous glucose metabolism;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0009243 - O antigen biosynthetic process%3B GO_process: GO:0009246 - enterobacterial common antigen biosynthetic process%3B GO_process: GO:0006006 - glucose metabolic process%3B GO_process: GO:0009252 - peptidoglycan biosynthetic process;codon_start=1;transl_table=11;product=phosphoglucosamine mutase;protein_id=AAC76208.1;db_xref=GI:1789566;db_xref=ASAP:ABE-0010439;db_xref=UniProtKB/Swiss-Prot:P31120;db_xref=EcoGene:EG11553 EMBL gene 3324063 3324911 . - . ID=.6885;gene=folP;locus_tag=b3177;gene_synonym=dhpS;gene_synonym=ECK3166;gene_synonym=JW3144;db_xref=EcoGene:EG50011 EMBL CDS 3324063 3324911 . - 0 ID=.6886;gene=folP;locus_tag=b3177;gene_synonym=dhpS;gene_synonym=ECK3166;gene_synonym=JW3144;ec_number=2.5.1.15;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Folic acid;experiment=N-terminus verified by Edman degradation: PMID 1657875;note=GO_process: GO:0046656 - folic acid biosynthetic process;codon_start=1;transl_table=11;product=7%2C8-dihydropteroate synthase;protein_id=AAC76209.2;db_xref=GI:87082224;db_xref=ASAP:ABE-0010441;db_xref=UniProtKB/Swiss-Prot:P0AC13;db_xref=EcoGene:EG50011 EMBL gene 3325001 3326935 . - . ID=.6887;gene=ftsH;locus_tag=b3178;gene_synonym=ECK3167;gene_synonym=hflB;gene_synonym=JW3145;gene_synonym=mrsC;gene_synonym=std;gene_synonym=tolZ;db_xref=EcoGene:EG11506 EMBL CDS 3325001 3326935 . - 0 ID=.6888;gene=ftsH;locus_tag=b3178;gene_synonym=ECK3167;gene_synonym=hflB;gene_synonym=JW3145;gene_synonym=mrsC;gene_synonym=std;gene_synonym=tolZ;ec_number=3.4.24.-;function=enzyme%3B Degradation of proteins%2C peptides%2C glyco;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=protease%2C ATP-dependent zinc-metallo;protein_id=AAC76210.1;db_xref=GI:1789568;db_xref=ASAP:ABE-0010444;db_xref=UniProtKB/Swiss-Prot:P0AAI3;db_xref=EcoGene:EG11506 EMBL gene 3327035 3327664 . - . ID=.6889;gene=rlmE;locus_tag=b3179;gene_synonym=ECK3168;gene_synonym=ftsJ;gene_synonym=JW3146;gene_synonym=mrsF;gene_synonym=rrmJ;db_xref=EcoGene:EG11507 EMBL CDS 3327035 3327664 . - 0 ID=.6890;gene=rlmE;locus_tag=b3179;gene_synonym=ECK3168;gene_synonym=ftsJ;gene_synonym=JW3146;gene_synonym=mrsF;gene_synonym=rrmJ;ec_number=2.1.1.-;function=enzyme%3B rRNA modification%3B phenotype%3B Cell division;codon_start=1;transl_table=11;product=23S rRNA U2552 2'-O-ribose methyltransferase%2C SAM-dependent;protein_id=AAC76211.1;db_xref=GI:1789569;db_xref=ASAP:ABE-0010447;db_xref=UniProtKB/Swiss-Prot:P0C0R7;db_xref=EcoGene:EG11507 EMBL gene 3327790 3328083 . + . ID=.6891;gene=yhbY;locus_tag=b3180;gene_synonym=ECK3169;gene_synonym=JW3147;db_xref=EcoGene:EG12794 EMBL CDS 3327790 3328083 . + 0 ID=.6892;gene=yhbY;locus_tag=b3180;gene_synonym=ECK3169;gene_synonym=JW3147;codon_start=1;transl_table=11;product=RNA binding protein associated with pre-50S ribosomal subunits;protein_id=AAC76212.1;db_xref=GI:1789570;db_xref=ASAP:ABE-0010452;db_xref=UniProtKB/Swiss-Prot:P0AGK4;db_xref=EcoGene:EG12794 EMBL gene 3328239 3328715 . - . ID=.6893;gene=greA;locus_tag=b3181;gene_synonym=ECK3170;gene_synonym=JW3148;db_xref=EcoGene:EG10415 EMBL CDS 3328239 3328715 . - 0 ID=.6894;gene=greA;locus_tag=b3181;gene_synonym=ECK3170;gene_synonym=JW3148;function=regulator%3B Proteins - translation and modification;experiment=N-terminus verified by Edman degradation: PMID 1384037;note=transcription elongation factor: cleaves 3' nucleotide of paused mRNA%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006350 - transcription%3B GO_process: GO:0006355 - regulation of transcription%2C DNA-dependent;codon_start=1;transl_table=11;product=transcript cleavage factor;protein_id=AAC76213.2;db_xref=GI:87082225;db_xref=ASAP:ABE-0010454;db_xref=UniProtKB/Swiss-Prot:P0A6W5;db_xref=EcoGene:EG10415 EMBL gene 3328963 3330396 . + . ID=.6895;gene=dacB;locus_tag=b3182;gene_synonym=ECK3171;gene_synonym=JW3149;db_xref=EcoGene:EG10202 EMBL CDS 3328963 3330396 . + 0 ID=.6896;gene=dacB;locus_tag=b3182;gene_synonym=ECK3171;gene_synonym=JW3149;ec_number=3.4.16.4;function=enzyme%3B Murein sacculus%2C peptidoglycan;note=D-alanyl-D-alanine carboxypeptidase%2C fraction B%3B penicillin-binding protein 4%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0009252 - peptidoglycan biosynthetic process%3B GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=D-alanyl-D-alanine carboxypeptidase;protein_id=AAC76214.1;db_xref=GI:1789573;db_xref=ASAP:ABE-0010458;db_xref=UniProtKB/Swiss-Prot:P24228;db_xref=EcoGene:EG10202 EMBL repeat_region 3330460 3330557 . + . ID=.6897;note=RIP243 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 3330582 3331754 . - . ID=.6898;gene=obgE;locus_tag=b3183;gene_synonym=cgtA;gene_synonym=ECK3172;gene_synonym=JW3150;gene_synonym=obg;gene_synonym=yhbZ;db_xref=EcoGene:EG12795 EMBL CDS 3330582 3331754 . - 0 ID=.6899;gene=obgE;locus_tag=b3183;gene_synonym=cgtA;gene_synonym=ECK3172;gene_synonym=JW3150;gene_synonym=obg;gene_synonym=yhbZ;function=putative factor%3B Not classified;note=putative GTP-binding factor;codon_start=1;transl_table=11;product=GTPase involved in cell partioning and DNA repair;protein_id=AAC76215.1;db_xref=GI:1789574;db_xref=ASAP:ABE-0010462;db_xref=UniProtKB/Swiss-Prot:P42641;db_xref=EcoGene:EG12795 EMBL gene 3331770 3332735 . - . ID=.6900;gene=yhbE;locus_tag=b3184;gene_synonym=ECK3173;gene_synonym=JW3151;db_xref=EcoGene:EG11499 EMBL CDS 3331770 3332735 . - 0 ID=.6901;gene=yhbE;locus_tag=b3184;gene_synonym=ECK3173;gene_synonym=JW3151;note=GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=EamA family inner membrane putative transporter;protein_id=AAC76216.1;db_xref=GI:1789575;db_xref=ASAP:ABE-0010464;db_xref=UniProtKB/Swiss-Prot:P0AA73;db_xref=EcoGene:EG11499 EMBL gene 3332862 3333119 . - . ID=.6902;gene=rpmA;locus_tag=b3185;gene_synonym=ECK3174;gene_synonym=JW3152;gene_synonym=rpz;db_xref=EcoGene:EG50002 EMBL CDS 3332862 3333119 . - 0 ID=.6903;gene=rpmA;locus_tag=b3185;gene_synonym=ECK3174;gene_synonym=JW3152;gene_synonym=rpz;function=structural component%3B Ribosomal proteins - synthesis%2C modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0003735 - structural constituent of ribosome%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=50S ribosomal subunit protein L27;protein_id=AAC76217.1;db_xref=GI:1789576;db_xref=ASAP:ABE-0010468;db_xref=UniProtKB/Swiss-Prot:P0A7L8;db_xref=EcoGene:EG50002 EMBL gene 3333140 3333451 . - . ID=.6904;gene=rplU;locus_tag=b3186;gene_synonym=ECK3175;gene_synonym=JW3153;db_xref=EcoGene:EG50001 EMBL CDS 3333140 3333451 . - 0 ID=.6905;gene=rplU;locus_tag=b3186;gene_synonym=ECK3175;gene_synonym=JW3153;function=structural component%3B Ribosomal proteins - synthesis%2C modification;experiment=N-terminus verified by Edman degradation: PMID 387076%2C8740179;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0003735 - structural constituent of ribosome%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=50S ribosomal subunit protein L21;protein_id=AAC76218.1;db_xref=GI:1789577;db_xref=ASAP:ABE-0010470;db_xref=UniProtKB/Swiss-Prot:P0AG48;db_xref=EcoGene:EG50001 EMBL gene 3333710 3334681 . + . ID=.6906;gene=ispB;locus_tag=b3187;gene_synonym=cel;gene_synonym=ECK3176;gene_synonym=JW3154;gene_synonym=yhbD;db_xref=EcoGene:EG10017 EMBL CDS 3333710 3334681 . + 0 ID=.6907;gene=ispB;locus_tag=b3187;gene_synonym=cel;gene_synonym=ECK3176;gene_synonym=JW3154;gene_synonym=yhbD;ec_number=2.5.1.-;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Menaquinone%2C ubiquinone;codon_start=1;transl_table=11;product=octaprenyl diphosphate synthase;protein_id=AAC76219.1;db_xref=GI:1789578;db_xref=ASAP:ABE-0010474;db_xref=UniProtKB/Swiss-Prot:P0AD57;db_xref=EcoGene:EG10017 EMBL gene 3334909 3335187 . + . ID=.6908;gene=sfsB;locus_tag=b3188;gene_synonym=ECK3177;gene_synonym=JW3155;gene_synonym=nlp;gene_synonym=sfs7;db_xref=EcoGene:EG10656 EMBL CDS 3334909 3335187 . + 0 ID=.6909;gene=sfsB;locus_tag=b3188;gene_synonym=ECK3177;gene_synonym=JW3155;gene_synonym=nlp;gene_synonym=sfs7;function=regulator%3B Degradation of small molecules: Carbon compounds;note=regulatory factor of maltose metabolism%3B similar to Ner repressor protein of phage Mu%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=malPQ operon transcriptional activator;protein_id=AAC76220.1;db_xref=GI:1789579;db_xref=ASAP:ABE-0010477;db_xref=UniProtKB/Swiss-Prot:P0ACH1;db_xref=EcoGene:EG10656 EMBL gene 3335235 3336494 . - . ID=.6910;gene=murA;locus_tag=b3189;gene_synonym=ECK3178;gene_synonym=JW3156;gene_synonym=mrbA;gene_synonym=murZ;db_xref=EcoGene:EG11358 EMBL CDS 3335235 3336494 . - 0 ID=.6911;gene=murA;locus_tag=b3189;gene_synonym=ECK3178;gene_synonym=JW3156;gene_synonym=mrbA;gene_synonym=murZ;ec_number=2.5.1.7;function=enzyme%3B Murein sacculus%2C peptidoglycan;experiment=N-terminus verified by Edman degradation: PMID 1512209;note=first step in murein biosynthesis%3BUDP-N-glucosamine 1-carboxyvinyltransferase%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_process: GO:0009252 - peptidoglycan biosynthetic process;codon_start=1;transl_table=11;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=AAC76221.1;db_xref=GI:1789580;db_xref=ASAP:ABE-0010479;db_xref=UniProtKB/Swiss-Prot:P0A749;db_xref=EcoGene:EG11358 EMBL gene 3336549 3336803 . - . ID=.6912;gene=ibaG;locus_tag=b3190;gene_synonym=ECK3179;gene_synonym=JW3157;gene_synonym=yrbA;db_xref=EcoGene:EG12796 EMBL CDS 3336549 3336803 . - 0 ID=.6913;gene=ibaG;locus_tag=b3190;gene_synonym=ECK3179;gene_synonym=JW3157;gene_synonym=yrbA;note=GO_process: GO:0006355 - regulation of transcription%2C DNA-dependent;codon_start=1;transl_table=11;product=acid stress protein%3B putative BolA family transcriptional regulator;protein_id=AAC76222.2;db_xref=GI:87082226;db_xref=ASAP:ABE-0010481;db_xref=UniProtKB/Swiss-Prot:P0A9W6;db_xref=EcoGene:EG12796 EMBL repeat_region 3336919 3336952 . + . ID=.6914;note=REP244 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 3336963 3337256 . - . ID=.6915;gene=mlaB;locus_tag=b3191;gene_synonym=ECK3180;gene_synonym=JW5535;gene_synonym=yrbB;db_xref=EcoGene:EG12797 EMBL CDS 3336963 3337256 . - 0 ID=.6916;gene=mlaB;locus_tag=b3191;gene_synonym=ECK3180;gene_synonym=JW5535;gene_synonym=yrbB;function=transport%3B Transport of small molecules: phospholipids;codon_start=1;transl_table=11;product=ABC transporter maintaining OM lipid asymmetry%2C cytoplasmic STAS component;protein_id=AAC76223.2;db_xref=GI:87082227;db_xref=ASAP:ABE-0010487;db_xref=UniProtKB/Swiss-Prot:P64602;db_xref=EcoGene:EG12797 EMBL gene 3337256 3337891 . - . ID=.6917;gene=mlaC;locus_tag=b3192;gene_synonym=ECK3181;gene_synonym=JW3159;gene_synonym=yrbC;db_xref=EcoGene:EG12798 EMBL CDS 3337256 3337891 . - 0 ID=.6918;gene=mlaC;locus_tag=b3192;gene_synonym=ECK3181;gene_synonym=JW3159;gene_synonym=yrbC;function=transport%3B Transport of small molecules: phospholipids;note=GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=ABC transporter maintaining OM lipid asymmetry%2C periplasmic binding protein;protein_id=AAC76224.1;db_xref=GI:1789583;db_xref=ASAP:ABE-0010489;db_xref=UniProtKB/Swiss-Prot:P0ADV7;db_xref=EcoGene:EG12798 EMBL gene 3337910 3338461 . - . ID=.6919;gene=mlaD;locus_tag=b3193;gene_synonym=ECK3182;gene_synonym=JW3160;gene_synonym=vpsC;gene_synonym=yrbD;db_xref=EcoGene:EG12799 EMBL CDS 3337910 3338461 . - 0 ID=.6920;gene=mlaD;locus_tag=b3193;gene_synonym=ECK3182;gene_synonym=JW3160;gene_synonym=vpsC;gene_synonym=yrbD;function=transport%3B Transport of small molecules: phospholipids;codon_start=1;transl_table=11;product=OM lipid asymmetry maintenance protein%3B membrane-anchored ABC family periplasmic binding protein;protein_id=AAC76225.1;db_xref=GI:1789584;db_xref=ASAP:ABE-0010493;db_xref=UniProtKB/Swiss-Prot:P64604;db_xref=EcoGene:EG12799 EMBL gene 3338466 3339248 . - . ID=.6921;gene=mlaE;locus_tag=b3194;gene_synonym=ECK3183;gene_synonym=JW3161;gene_synonym=vpsB;gene_synonym=yrbE;db_xref=EcoGene:EG12800 EMBL CDS 3338466 3339248 . - 0 ID=.6922;gene=mlaE;locus_tag=b3194;gene_synonym=ECK3183;gene_synonym=JW3161;gene_synonym=vpsB;gene_synonym=yrbE;function=transport%3B Transport of small molecules: phospholipids;codon_start=1;transl_table=11;product=ABC transporter maintaining OM lipid asymmetry%2C inner membrane permease protein;protein_id=AAC76226.1;db_xref=GI:1789585;db_xref=ASAP:ABE-0010495;db_xref=UniProtKB/Swiss-Prot:P64606;db_xref=EcoGene:EG12800 EMBL gene 3339256 3340065 . - . ID=.6923;gene=mlaF;locus_tag=b3195;gene_synonym=ECK3184;gene_synonym=JW3162;gene_synonym=vpsA;gene_synonym=yrbF;db_xref=EcoGene:EG12801 EMBL CDS 3339256 3340065 . - 0 ID=.6924;gene=mlaF;locus_tag=b3195;gene_synonym=ECK3184;gene_synonym=JW3162;gene_synonym=vpsA;gene_synonym=yrbF;function=transport%3B Transport of small molecules: phospholipids;note=putative ATP-binding component of a transport system%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=ABC transporter maintaining OM lipid asymmetry%2C ATP-binding protein;protein_id=AAC76227.1;db_xref=GI:1789586;db_xref=ASAP:ABE-0010498;db_xref=UniProtKB/Swiss-Prot:P63386;db_xref=EcoGene:EG12801 EMBL gene 3340275 3341252 . + . ID=.6925;gene=yrbG;locus_tag=b3196;gene_synonym=ECK3185;gene_synonym=JW3163;db_xref=EcoGene:EG12802 EMBL CDS 3340275 3341252 . + 0 ID=.6926;gene=yrbG;locus_tag=b3196;gene_synonym=ECK3185;gene_synonym=JW3163;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_function: GO:0005432 - calcium:sodium antiporter activity;codon_start=1;transl_table=11;product=putative calcium/sodium:proton antiporter;protein_id=AAC76228.1;db_xref=GI:1789587;db_xref=ASAP:ABE-0010502;db_xref=UniProtKB/Swiss-Prot:P45394;db_xref=EcoGene:EG12802 EMBL gene 3341266 3342252 . + . ID=.6927;gene=kdsD;locus_tag=b3197;gene_synonym=ECK3186;gene_synonym=JW3164;gene_synonym=yrbH;db_xref=EcoGene:EG12803 EMBL CDS 3341266 3342252 . + 0 ID=.6928;gene=kdsD;locus_tag=b3197;gene_synonym=ECK3186;gene_synonym=JW3164;gene_synonym=yrbH;ec_number=5.3.1.13;function=putative enzyme%3B Not classified;note=putative isomerase;codon_start=1;transl_table=11;product=D-arabinose 5-phosphate isomerase;protein_id=AAC76229.1;db_xref=GI:1789588;db_xref=ASAP:ABE-0010504;db_xref=UniProtKB/Swiss-Prot:P45395;db_xref=EcoGene:EG12803 EMBL gene 3342273 3342839 . + . ID=.6929;gene=kdsC;locus_tag=b3198;gene_synonym=ECK3187;gene_synonym=JW3165;gene_synonym=yrbI;gene_synonym=yrbJ;db_xref=EcoGene:EG12804 EMBL CDS 3342273 3342839 . + 0 ID=.6930;gene=kdsC;locus_tag=b3198;gene_synonym=ECK3187;gene_synonym=JW3165;gene_synonym=yrbI;gene_synonym=yrbJ;ec_number=3.1.3.45;codon_start=1;transl_table=11;product=3-deoxy-D-manno-octulosonate 8-phosphate phosphatase;protein_id=AAC76230.1;db_xref=GI:2367202;db_xref=ASAP:ABE-0010506;db_xref=UniProtKB/Swiss-Prot:P0ABZ4;db_xref=EcoGene:EG12804 EMBL gene 3342836 3343411 . + . ID=.6931;gene=lptC;locus_tag=b3199;gene_synonym=ECK3188;gene_synonym=JW3166;gene_synonym=yrbK;db_xref=EcoGene:EG12806 EMBL CDS 3342836 3343411 . + 0 ID=.6932;gene=lptC;locus_tag=b3199;gene_synonym=ECK3188;gene_synonym=JW3166;gene_synonym=yrbK;codon_start=1;transl_table=11;product=periplasmic membrane-anchored LPS-binding protein%3B LPS export protein;protein_id=AAC76231.1;db_xref=GI:1789591;db_xref=ASAP:ABE-0010508;db_xref=UniProtKB/Swiss-Prot:P0ADV9;db_xref=EcoGene:EG12806 EMBL gene 3343380 3343937 . + . ID=.6933;gene=lptA;locus_tag=b3200;gene_synonym=ECK3189;gene_synonym=JW3167;gene_synonym=yhbN;db_xref=EcoGene:EG12618 EMBL CDS 3343380 3343937 . + 0 ID=.6934;gene=lptA;locus_tag=b3200;gene_synonym=ECK3189;gene_synonym=JW3167;gene_synonym=yhbN;function=lipopolysaccharide biosynthesis;codon_start=1;transl_table=11;product=lipopolysaccharide export ABC transporter periplasmic binding protein%3B Lipid A binding protein%3B LPS export and assembly protein;protein_id=AAC76232.1;db_xref=GI:1789592;db_xref=ASAP:ABE-0010510;db_xref=UniProtKB/Swiss-Prot:P0ADV1;db_xref=EcoGene:EG12618 EMBL gene 3343944 3344669 . + . ID=.6935;gene=lptB;locus_tag=b3201;gene_synonym=ECK3190;gene_synonym=JW3168;gene_synonym=yhbG;db_xref=EcoGene:EG11680 EMBL CDS 3343944 3344669 . + 0 ID=.6936;gene=lptB;locus_tag=b3201;gene_synonym=ECK3190;gene_synonym=JW3168;gene_synonym=yhbG;function=putative transport%3B Not classified;note=putative ATP-binding component of a transport system%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=lipopolysaccharide export ABC transporter ATPase;protein_id=AAC76233.1;db_xref=GI:1789593;db_xref=ASAP:ABE-0010512;db_xref=UniProtKB/Swiss-Prot:P0A9V1;db_xref=EcoGene:EG11680 EMBL gene 3344717 3346150 . + . ID=.6937;gene=rpoN;locus_tag=b3202;gene_synonym=ECK3191;gene_synonym=glnF;gene_synonym=JW3169;gene_synonym=ntrA;db_xref=EcoGene:EG10898 EMBL CDS 3344717 3346150 . + 0 ID=.6938;gene=rpoN;locus_tag=b3202;gene_synonym=ECK3191;gene_synonym=glnF;gene_synonym=JW3169;gene_synonym=ntrA;function=regulator%3B Global regulatory functions;note=RNA polymerase%2C sigma(54 or 60) factor%3B nitrogen and fermentation regulation%3B GO_process: GO:0006807 - nitrogen compound metabolic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=RNA polymerase%2C sigma 54 (sigma N) factor;protein_id=AAC76234.1;db_xref=GI:1789594;db_xref=ASAP:ABE-0010514;db_xref=UniProtKB/Swiss-Prot:P24255;db_xref=EcoGene:EG10898 EMBL gene 3346173 3346460 . + . ID=.6939;gene=hpf;locus_tag=b3203;gene_synonym=ECK3192;gene_synonym=JW3170;gene_synonym=yhbH;db_xref=EcoGene:EG11681 EMBL CDS 3346173 3346460 . + 0 ID=.6940;gene=hpf;locus_tag=b3203;gene_synonym=ECK3192;gene_synonym=JW3170;gene_synonym=yhbH;function=putative regulator%3B Global regulatory functions;experiment=N-terminus verified by Edman degradation: PMID 11168583;note=probable sigma-54 modulation protein%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=ribosome hibernation promoting factor HPF%3B stabilizes 100S dimers;protein_id=AAC76235.1;db_xref=GI:1789595;db_xref=ASAP:ABE-0010516;db_xref=UniProtKB/Swiss-Prot:P0AFX0;db_xref=EcoGene:EG11681 EMBL gene 3346578 3347069 . + . ID=.6941;gene=ptsN;locus_tag=b3204;gene_synonym=ECK3193;gene_synonym=JW3171;gene_synonym=rpoP;gene_synonym=yhbI;db_xref=EcoGene:EG11682 EMBL CDS 3346578 3347069 . + 0 ID=.6942;gene=ptsN;locus_tag=b3204;gene_synonym=ECK3193;gene_synonym=JW3171;gene_synonym=rpoP;gene_synonym=yhbI;ec_number=2.7.1.69;function=enzyme%3B Transport of small molecules: Amino acids%2C amines;note=phosphotransferase system enzyme IIA%2C regulates N metabolism;codon_start=1;transl_table=11;product=sugar-specific enzyme IIA component of PTS;protein_id=AAC76236.1;db_xref=GI:1789597;db_xref=ASAP:ABE-0010520;db_xref=UniProtKB/Swiss-Prot:P69829;db_xref=EcoGene:EG11682 EMBL gene 3347115 3347969 . + . ID=.6943;gene=yhbJ;locus_tag=b3205;gene_synonym=ECK3194;gene_synonym=JW3172;gene_synonym=rapZ;db_xref=EcoGene:EG12146 EMBL CDS 3347115 3347969 . + 0 ID=.6944;gene=yhbJ;locus_tag=b3205;gene_synonym=ECK3194;gene_synonym=JW3172;gene_synonym=rapZ;codon_start=1;transl_table=11;product=adaptor protein for GlmZ/GlmY sRNA decay%2C glucosamine-6-phosphate-regulated%3B NTPase;protein_id=AAC76237.1;db_xref=GI:1789598;db_xref=ASAP:ABE-0010522;db_xref=UniProtKB/Swiss-Prot:P0A894;db_xref=EcoGene:EG12146 EMBL gene 3347966 3348238 . + . ID=.6945;gene=npr;locus_tag=b3206;gene_synonym=ECK3195;gene_synonym=JW3173;gene_synonym=ptsO;gene_synonym=rpoR;gene_synonym=yhbK;db_xref=EcoGene:EG12147 EMBL CDS 3347966 3348238 . + 0 ID=.6946;gene=npr;locus_tag=b3206;gene_synonym=ECK3195;gene_synonym=JW3173;gene_synonym=ptsO;gene_synonym=rpoR;gene_synonym=yhbK;function=transport%3B Transport of small molecules: Other;note=phosphocarrier protein HPr-like NPr%2C nitrogen related%2C exchanges phosphate with Enzyme I%2C Hpr%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr);protein_id=AAC76238.1;db_xref=GI:1789599;db_xref=ASAP:ABE-0010524;db_xref=UniProtKB/Swiss-Prot:P0A9N0;db_xref=EcoGene:EG12147 EMBL gene 3348452 3349084 . + . ID=.6947;gene=yrbL;locus_tag=b3207;gene_synonym=ECK3196;gene_synonym=JW3174;db_xref=EcoGene:EG12807 EMBL CDS 3348452 3349084 . + 0 ID=.6948;gene=yrbL;locus_tag=b3207;gene_synonym=ECK3196;gene_synonym=JW3174;codon_start=1;transl_table=11;product=Mg(2+)-starvation-stimulated protein;protein_id=AAC76239.1;db_xref=GI:1789600;db_xref=ASAP:ABE-0010528;db_xref=UniProtKB/Swiss-Prot:P64610;db_xref=EcoGene:EG12807 EMBL gene 3349081 3349809 . - . ID=.6949;gene=mtgA;locus_tag=b3208;gene_synonym=ECK3197;gene_synonym=JW3175;gene_synonym=mgt;gene_synonym=yrbM;db_xref=EcoGene:EG12808 EMBL CDS 3349081 3349809 . - 0 ID=.6950;gene=mtgA;locus_tag=b3208;gene_synonym=ECK3197;gene_synonym=JW3175;gene_synonym=mgt;gene_synonym=yrbM;ec_number=2.4.2.-;function=putative enzyme%3B Not classified;note=putative peptidoglycan enzyme%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_process: GO:0009252 - peptidoglycan biosynthetic process;codon_start=1;transl_table=11;product=biosynthetic peptidoglycan transglycosylase;protein_id=AAC76240.1;db_xref=GI:1789601;db_xref=ASAP:ABE-0010530;db_xref=UniProtKB/Swiss-Prot:P46022;db_xref=EcoGene:EG12808 EMBL gene 3349806 3350459 . - . ID=.6951;gene=elbB;locus_tag=b3209;gene_synonym=ECK3198;gene_synonym=elb2;gene_synonym=JW3176;gene_synonym=yhbL;gene_synonym=yzzB;db_xref=EcoGene:EG11383 EMBL CDS 3349806 3350459 . - 0 ID=.6952;gene=elbB;locus_tag=b3209;gene_synonym=ECK3198;gene_synonym=elb2;gene_synonym=JW3176;gene_synonym=yhbL;gene_synonym=yzzB;function=putative factor%3B Not classified;experiment=N-terminus verified by Edman degradation: PMID 1575737;note=sigma cross-reacting protein 27A (SCRP-27A);codon_start=1;transl_table=11;product=isoprenoid biosynthesis protein with amidotransferase-like domain;protein_id=AAC76241.2;db_xref=GI:87082228;db_xref=ASAP:ABE-0010532;db_xref=UniProtKB/Swiss-Prot:P0ABU5;db_xref=EcoGene:EG11383 EMBL gene 3350577 3350697 . + . ID=.6953;gene=arcZ;locus_tag=b4450;gene_synonym=ECK3199;gene_synonym=JWR0254;gene_synonym=psrA16;gene_synonym=ryhA;gene_synonym=sraH;db_xref=EcoGene:EG31163 EMBL ncRNA 3350577 3350697 . + . ID=.6954;ncrna_class=antisense_RNA;gene=arcZ;locus_tag=b4450;gene_synonym=ECK3199;gene_synonym=JWR0254;gene_synonym=psrA16;gene_synonym=ryhA;gene_synonym=sraH;product=sRNA positive antisense regulator of rpoS%3B binds Hfq;note=identified in a large scale screen;db_xref=ASAP:ABE-0047270;db_xref=EcoGene:EG31163 EMBL gene 3350689 3353025 . - . ID=.6955;gene=arcB;locus_tag=b3210;gene_synonym=ECK3200;gene_synonym=JW5536;db_xref=EcoGene:EG10062 EMBL CDS 3350689 3353025 . - 0 ID=.6956;gene=arcB;locus_tag=b3210;gene_synonym=ECK3200;gene_synonym=JW5536;function=enzyme%3B Global regulatory functions;note=aerobic respiration sensor-response protein%3B histidine protein kinase/phosphatase%2C sensor for arcA%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009060 - aerobic respiration%3B GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=aerobic respiration control sensor histidine protein kinase%2C cognate to two-component response regulators ArcA and RssB;protein_id=AAT48172.1;db_xref=GI:48994928;db_xref=ASAP:ABE-0010537;db_xref=UniProtKB/Swiss-Prot:P0AEC3;db_xref=EcoGene:EG10062 EMBL gene 3353121 3354050 . - . ID=.6957;gene=yhcC;locus_tag=b3211;gene_synonym=ECK3201;gene_synonym=JW3178;db_xref=EcoGene:EG12809 EMBL CDS 3353121 3354050 . - 0 ID=.6958;gene=yhcC;locus_tag=b3211;gene_synonym=ECK3201;gene_synonym=JW3178;codon_start=1;transl_table=11;product=putative Fe-S oxidoreductase%2C Radical SAM superfamily protein;protein_id=AAC76243.1;db_xref=GI:2367204;db_xref=ASAP:ABE-0010540;db_xref=UniProtKB/Swiss-Prot:P0ADW6;db_xref=EcoGene:EG12809 EMBL gene 3354725 3359185 . + . ID=.6959;gene=gltB;locus_tag=b3212;gene_synonym=aspB;gene_synonym=ECK3202;gene_synonym=JW3179;gene_synonym=ossB;gene_synonym=psiQ;db_xref=EcoGene:EG10403 EMBL CDS 3354725 3359185 . + 0 ID=.6960;gene=gltB;locus_tag=b3212;gene_synonym=aspB;gene_synonym=ECK3202;gene_synonym=JW3179;gene_synonym=ossB;gene_synonym=psiQ;ec_number=1.4.1.13;function=enzyme%3B Central intermediary metabolism: Pool%2C multipurpose conversions;note=GO_process: GO:0006537 - glutamate biosynthetic process%3B GO_process: GO:0006807 - nitrogen compound metabolic process;codon_start=1;transl_table=11;product=glutamate synthase%2C large subunit;protein_id=AAC76244.2;db_xref=GI:308199519;db_xref=ASAP:ABE-0010545;db_xref=UniProtKB/Swiss-Prot:P09831;db_xref=EcoGene:EG10403 EMBL gene 3359198 3360616 . + . ID=.6961;gene=gltD;locus_tag=b3213;gene_synonym=aspB;gene_synonym=ECK3203;gene_synonym=JW3180;gene_synonym=ossB;gene_synonym=psiQ;db_xref=EcoGene:EG10404 EMBL CDS 3359198 3360616 . + 0 ID=.6962;gene=gltD;locus_tag=b3213;gene_synonym=aspB;gene_synonym=ECK3203;gene_synonym=JW3180;gene_synonym=ossB;gene_synonym=psiQ;ec_number=1.4.1.13;function=enzyme%3B Central intermediary metabolism: Pool%2C multipurpose conversions;note=glutamate synthase%2C small subunit%3B GO_process: GO:0006537 - glutamate biosynthetic process%3B GO_process: GO:0006807 - nitrogen compound metabolic process;codon_start=1;transl_table=11;product=glutamate synthase%2C 4Fe-4S protein%2C small subunit;protein_id=AAC76245.1;db_xref=GI:1789606;db_xref=ASAP:ABE-0010547;db_xref=UniProtKB/Swiss-Prot:P09832;db_xref=EcoGene:EG10404 EMBL repeat_region 3360688 3360786 . + . ID=.6963;note=RIP51 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 3361176 3361940 . + . ID=.6964;gene=gltF;locus_tag=b3214;gene_synonym=ECK3204;gene_synonym=JW3181;gene_synonym=ossB;db_xref=EcoGene:EG11514 EMBL CDS 3361176 3361940 . + 0 ID=.6965;gene=gltF;locus_tag=b3214;gene_synonym=ECK3204;gene_synonym=JW3181;gene_synonym=ossB;function=regulator%3B Central intermediary metabolism: Pool%2C multipurpose conversions;note=regulator of gltBDF operon%2C induction of Ntr enzymes%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0006537 - glutamate biosynthetic process%3B GO_process: GO:0006807 - nitrogen compound metabolic process%3B GO_process: GO:0006355 - regulation of transcription%2C DNA-dependent;codon_start=1;transl_table=11;product=periplasmic protein;protein_id=AAC76246.1;db_xref=GI:1789608;db_xref=ASAP:ABE-0010549;db_xref=UniProtKB/Swiss-Prot:P28721;db_xref=EcoGene:EG11514 EMBL gene 3362112 3362786 . + . ID=.6966;gene=yhcA;locus_tag=b3215;gene_synonym=ECK3205;gene_synonym=JW3182;db_xref=EcoGene:EG11515 EMBL CDS 3362112 3362786 . + 0 ID=.6967;gene=yhcA;locus_tag=b3215;gene_synonym=ECK3205;gene_synonym=JW3182;function=putative factor%3B Not classified;note=putative chaperone%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=putative periplasmic chaperone protein;protein_id=AAC76247.1;db_xref=GI:1789609;db_xref=ASAP:ABE-0010552;db_xref=UniProtKB/Swiss-Prot:P28722;db_xref=EcoGene:EG11515 EMBL gene 3362807 3365188 . + . ID=.6968;gene=yhcD;locus_tag=b3216;gene_synonym=ECK3206;gene_synonym=JW3183;db_xref=EcoGene:EG12810 EMBL CDS 3362807 3365188 . + 0 ID=.6969;gene=yhcD;locus_tag=b3216;gene_synonym=ECK3206;gene_synonym=JW3183;function=putative membrane%3B Not classified;note=putative outer membrane protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane;codon_start=1;transl_table=11;product=putative outer membrane fimbrial subunit usher protein;protein_id=AAC76248.1;db_xref=GI:1789610;db_xref=ASAP:ABE-0010554;db_xref=UniProtKB/Swiss-Prot:P45420;db_xref=EcoGene:EG12810 EMBL biological_region 3365185 3366929 . + . ID=.6970;featflags=type:gene;gene=yhcE;locus_tag=b4569;gene_synonym=ECK3207;gene_synonym=JW3184;gene_synonym=JW3187;pseudo=true;db_xref=EcoGene:EG12811 EMBL gene 3365185 3365551 . + . Parent=.6970 EMBL gene 3366751 3366929 . + . Parent=.6970 EMBL biological_region 3365185 3366929 . + 0 ID=.6973;featflags=type:CDS;gene=yhcE;locus_tag=b4569;gene_synonym=ECK3207;gene_synonym=JW3184;gene_synonym=JW3187;note=pseudogene fragment%3B interrupted by IS5;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0010556;db_xref=ASAP:ABE-0285070;db_xref=ASAP:ABE-0285102;db_xref=UniProtKB/Swiss-Prot:P45421;db_xref=EcoGene:EG12811 EMBL CDS 3365185 3365551 . + 0 Parent=.6973 EMBL CDS 3366751 3366929 . + 0 Parent=.6973 EMBL sequence_feature 3365556 3366750 . - . ID=.6976;note=*mobile_element_type: insertion sequence:IS5R EMBL gene 3365702 3366718 . - . ID=.6977;gene=insH1;locus_tag=b3218;gene_synonym=ECK0261;db_xref=EcoGene:EG40008 EMBL CDS 3365702 3366718 . - 0 ID=.6978;gene=insH1;locus_tag=b3218;gene_synonym=ECK0261;function=IS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;codon_start=1;transl_table=11;product=IS5 transposase and trans-activator;protein_id=AAC76250.1;db_xref=GI:1789612;db_xref=ASAP:ABE-0010559;db_xref=UniProtKB/Swiss-Prot:P0CE57;db_xref=EcoGene:EG40008 EMBL gene 3366926 3367642 . + . ID=.6979;gene=yhcF;locus_tag=b3219;gene_synonym=ECK3208;gene_synonym=JW3188;db_xref=EcoGene:EG12812 EMBL CDS 3366926 3367642 . + 0 ID=.6980;gene=yhcF;locus_tag=b3219;gene_synonym=ECK3208;gene_synonym=JW3188;function=putative regulator%3B Not classified;note=GO_process: GO:0006350 - transcription%3B GO_process: GO:0006355 - regulation of transcription%2C DNA-dependent;codon_start=1;transl_table=11;product=putative transcriptional regulator;protein_id=AAC76251.1;db_xref=GI:1789613;db_xref=ASAP:ABE-0010564;db_xref=UniProtKB/Swiss-Prot:P45422;db_xref=EcoGene:EG12812 EMBL gene 3367827 3368954 . + . ID=.6981;gene=yhcG;locus_tag=b3220;gene_synonym=ECK3209;gene_synonym=JW3189;db_xref=EcoGene:EG12813 EMBL CDS 3367827 3368954 . + 0 ID=.6982;gene=yhcG;locus_tag=b3220;gene_synonym=ECK3209;gene_synonym=JW3189;codon_start=1;transl_table=11;product=DUF1016 family protein in the PD-(D/E)XK nuclease superfamily;protein_id=AAC76252.1;db_xref=GI:1789614;db_xref=ASAP:ABE-0010567;db_xref=UniProtKB/Swiss-Prot:P45423;db_xref=EcoGene:EG12813 EMBL gene 3369014 3369478 . - . ID=.6983;gene=yhcH;locus_tag=b3221;gene_synonym=ECK3210;gene_synonym=JW3190;db_xref=EcoGene:EG12814 EMBL CDS 3369014 3369478 . - 0 ID=.6984;gene=yhcH;locus_tag=b3221;gene_synonym=ECK3210;gene_synonym=JW3190;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=DUF386 family protein%2C cupin superfamily;protein_id=AAC76253.1;db_xref=GI:1789615;db_xref=ASAP:ABE-0010569;db_xref=UniProtKB/Swiss-Prot:P45424;db_xref=EcoGene:EG12814 EMBL gene 3369475 3370350 . - . ID=.6985;gene=nanK;locus_tag=b3222;gene_synonym=ECK3211;gene_synonym=JW5538;gene_synonym=yhcI;db_xref=EcoGene:EG12815 EMBL CDS 3369475 3370350 . - 0 ID=.6986;gene=nanK;locus_tag=b3222;gene_synonym=ECK3211;gene_synonym=JW5538;gene_synonym=yhcI;function=putative regulator%3B Not classified;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0046349 - amino sugar biosynthetic process;codon_start=1;transl_table=11;product=N-acetylmannosamine kinase;protein_id=AAC76254.2;db_xref=GI:87082230;db_xref=ASAP:ABE-0010571;db_xref=UniProtKB/Swiss-Prot:P45425;db_xref=EcoGene:EG12815 EMBL gene 3370347 3371036 . - . ID=.6987;gene=nanE;locus_tag=b3223;gene_synonym=ECK3212;gene_synonym=JW3192;gene_synonym=yhcJ;db_xref=EcoGene:EG12816 EMBL CDS 3370347 3371036 . - 0 ID=.6988;gene=nanE;locus_tag=b3223;gene_synonym=ECK3212;gene_synonym=JW3192;gene_synonym=yhcJ;function=putative enzyme%3B Not classified;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0046349 - amino sugar biosynthetic process;codon_start=1;transl_table=11;product=putative N-acetylmannosamine-6-P epimerase;protein_id=AAC76255.1;db_xref=GI:1789617;db_xref=ASAP:ABE-0010575;db_xref=UniProtKB/Swiss-Prot:P0A761;db_xref=EcoGene:EG12816 EMBL gene 3371084 3372574 . - . ID=.6989;gene=nanT;locus_tag=b3224;gene_synonym=ECK3213;gene_synonym=JW3193;db_xref=EcoGene:EG20145 EMBL CDS 3371084 3372574 . - 0 ID=.6990;gene=nanT;locus_tag=b3224;gene_synonym=ECK3213;gene_synonym=JW3193;function=transport%3B Murein sacculus%2C peptidoglycan;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0046349 - amino sugar biosynthetic process;codon_start=1;transl_table=11;product=sialic acid transporter;protein_id=AAC76256.2;db_xref=GI:87082231;db_xref=ASAP:ABE-0010577;db_xref=UniProtKB/Swiss-Prot:P41036;db_xref=EcoGene:EG20145 EMBL gene 3372683 3373576 . - . ID=.6991;gene=nanA;locus_tag=b3225;gene_synonym=ECK3214;gene_synonym=JW3194;gene_synonym=npl;db_xref=EcoGene:EG10637 EMBL CDS 3372683 3373576 . - 0 ID=.6992;gene=nanA;locus_tag=b3225;gene_synonym=ECK3214;gene_synonym=JW3194;gene_synonym=npl;ec_number=4.1.3.3;function=enzyme%3B Surface polysaccharides %26 antigens;experiment=N-terminus verified by Edman degradation: PMID 3909108;note=N-acetylneuraminate lyase (aldolase)%3B catabolism of sialic acid%3B not K-12?%3B GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0046349 - amino sugar biosynthetic process;codon_start=1;transl_table=11;product=N-acetylneuraminate lyase;protein_id=AAC76257.1;db_xref=GI:1789620;db_xref=ASAP:ABE-0010579;db_xref=UniProtKB/Swiss-Prot:P0A6L4;db_xref=EcoGene:EG10637 EMBL gene 3373698 3374489 . - . ID=.6993;gene=nanR;locus_tag=b3226;gene_synonym=ECK3215;gene_synonym=JW3195;gene_synonym=yhcK;db_xref=EcoGene:EG12817 EMBL CDS 3373698 3374489 . - 0 ID=.6994;gene=nanR;locus_tag=b3226;gene_synonym=ECK3215;gene_synonym=JW3195;gene_synonym=yhcK;function=regulator%3B Not classified;note=GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=sialic acid-inducible nan operon repressor;protein_id=AAC76258.1;db_xref=GI:1789621;db_xref=ASAP:ABE-0010584;db_xref=UniProtKB/Swiss-Prot:P0A8W0;db_xref=EcoGene:EG12817 EMBL gene 3374869 3376236 . + . ID=.6995;gene=dcuD;locus_tag=b3227;gene_synonym=ECK3216;gene_synonym=JW3196;gene_synonym=yhcL;db_xref=EcoGene:EG12818 EMBL CDS 3374869 3376236 . + 0 ID=.6996;gene=dcuD;locus_tag=b3227;gene_synonym=ECK3216;gene_synonym=JW3196;gene_synonym=yhcL;function=putative transport%3B Not classified;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative transporter;protein_id=AAC76259.1;db_xref=GI:1789622;db_xref=ASAP:ABE-0010589;db_xref=UniProtKB/Swiss-Prot:P45428;db_xref=EcoGene:EG12818 EMBL gene 3376279 3376776 . - . ID=.6997;gene=sspB;locus_tag=b3228;gene_synonym=ECK3217;gene_synonym=JW3197;db_xref=EcoGene:EG10978 EMBL CDS 3376279 3376776 . - 0 ID=.6998;gene=sspB;locus_tag=b3228;gene_synonym=ECK3217;gene_synonym=JW3197;function=regulator%3B Global regulatory functions;experiment=N-terminus verified by Edman degradation: PMID 11009422;note=stringent starvation protein B%3B GO_process: GO:0042594 - response to starvation;codon_start=1;transl_table=11;product=ClpXP protease specificity enhancing factor;protein_id=AAC76260.1;db_xref=GI:1789623;db_xref=ASAP:ABE-0010591;db_xref=UniProtKB/Swiss-Prot:P0AFZ3;db_xref=EcoGene:EG10978 EMBL gene 3376782 3377420 . - . ID=.6999;gene=sspA;locus_tag=b3229;gene_synonym=ECK3218;gene_synonym=JW3198;gene_synonym=pog;gene_synonym=ssp;db_xref=EcoGene:EG10977 EMBL CDS 3376782 3377420 . - 0 ID=.7000;gene=sspA;locus_tag=b3229;gene_synonym=ECK3218;gene_synonym=JW3198;gene_synonym=pog;gene_synonym=ssp;function=regulator%3B Global regulatory functions;note=regulator of transcription%3B stringent starvation protein A%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006350 - transcription%3B GO_process: GO:0006355 - regulation of transcription%2C DNA-dependent%3B GO_process: GO:0042594 - response to starvation;codon_start=1;transl_table=11;product=stringent starvation protein A%2C phage P1 late gene activator%2C RNAP-associated acid-resistance protein%2C inactive glutathione S-transferase homolog;protein_id=AAC76261.1;db_xref=GI:1789624;db_xref=ASAP:ABE-0010594;db_xref=UniProtKB/Swiss-Prot:P0ACA3;db_xref=EcoGene:EG10977 EMBL gene 3377815 3378207 . - . ID=.7001;gene=rpsI;locus_tag=b3230;gene_synonym=ECK3219;gene_synonym=JW3199;db_xref=EcoGene:EG10908 EMBL CDS 3377815 3378207 . - 0 ID=.7002;gene=rpsI;locus_tag=b3230;gene_synonym=ECK3219;gene_synonym=JW3199;function=structural component%3B Ribosomal proteins - synthesis%2C modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0003735 - structural constituent of ribosome%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=30S ribosomal subunit protein S9;protein_id=AAC76262.1;db_xref=GI:1789625;db_xref=ASAP:ABE-0010597;db_xref=UniProtKB/Swiss-Prot:P0A7X3;db_xref=EcoGene:EG10908 EMBL gene 3378223 3378651 . - . ID=.7003;gene=rplM;locus_tag=b3231;gene_synonym=ECK3220;gene_synonym=JW3200;db_xref=EcoGene:EG10874 EMBL CDS 3378223 3378651 . - 0 ID=.7004;gene=rplM;locus_tag=b3231;gene_synonym=ECK3220;gene_synonym=JW3200;function=structural component%3B Ribosomal proteins - synthesis%2C modification;experiment=N-terminus verified by Edman degradation: PMID 365580%2C10739205;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0003735 - structural constituent of ribosome%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=50S ribosomal subunit protein L13;protein_id=AAC76263.1;db_xref=GI:1789626;db_xref=ASAP:ABE-0010599;db_xref=UniProtKB/Swiss-Prot:P0AA10;db_xref=EcoGene:EG10874 EMBL gene 3378870 3379997 . - . ID=.7005;gene=zapE;locus_tag=b3232;gene_synonym=ECK3221;gene_synonym=JW3201;gene_synonym=yhcM;db_xref=EcoGene:EG12819 EMBL CDS 3378870 3379997 . - 0 ID=.7006;gene=zapE;locus_tag=b3232;gene_synonym=ECK3221;gene_synonym=JW3201;gene_synonym=yhcM;function=enzyme%3B Not classified;codon_start=1;transl_table=11;product=divisome ATPase;protein_id=AAC76264.1;db_xref=GI:1789627;db_xref=ASAP:ABE-0010602;db_xref=UniProtKB/Swiss-Prot:P64612;db_xref=EcoGene:EG12819 EMBL gene 3380191 3380589 . + . ID=.7007;gene=yhcB;locus_tag=b3233;gene_synonym=ECK3222;gene_synonym=JW5539;db_xref=EcoGene:EG12614 EMBL CDS 3380191 3380589 . + 0 ID=.7008;gene=yhcB;locus_tag=b3233;gene_synonym=ECK3222;gene_synonym=JW5539;codon_start=1;transl_table=11;product=DUF1043 family inner membrane-anchored protein;protein_id=AAC76265.2;db_xref=GI:87082232;db_xref=ASAP:ABE-0010606;db_xref=UniProtKB/Swiss-Prot:P0ADW3;db_xref=EcoGene:EG12614 EMBL gene 3380743 3382110 . + . ID=.7009;gene=degQ;locus_tag=b3234;gene_synonym=ECK3223;gene_synonym=hhoA;gene_synonym=JW3203;db_xref=EcoGene:EG12612 EMBL CDS 3380743 3382110 . + 0 ID=.7010;gene=degQ;locus_tag=b3234;gene_synonym=ECK3223;gene_synonym=hhoA;gene_synonym=JW3203;ec_number=3.4.21.-;function=enzyme%3B Degradation of proteins%2C peptides%2C glycopeptides;note=serine endoprotease;codon_start=1;transl_table=11;product=serine endoprotease%2C periplasmic;protein_id=AAC76266.1;db_xref=GI:1789629;db_xref=ASAP:ABE-0010609;db_xref=UniProtKB/Swiss-Prot:P39099;db_xref=EcoGene:EG12612 EMBL gene 3382200 3383267 . + . ID=.7011;gene=degS;locus_tag=b3235;gene_synonym=ECK3224;gene_synonym=hhoB;gene_synonym=htrH;gene_synonym=JW3204;db_xref=EcoGene:EG11652 EMBL CDS 3382200 3383267 . + 0 ID=.7012;gene=degS;locus_tag=b3235;gene_synonym=ECK3224;gene_synonym=hhoB;gene_synonym=htrH;gene_synonym=JW3204;ec_number=3.4.21.-;function=enzyme%3B Degradation of proteins%2C peptides%2C glyco;note=protease%3B GO_component: GO:0042597 - periplasmic space%3B GO_function: GO:0008233 - peptidase activity%3B GO_process: GO:0006508 - proteolysis;codon_start=1;transl_table=11;product=serine endoprotease%2C periplasmic;protein_id=AAC76267.1;db_xref=GI:1789630;db_xref=ASAP:ABE-0010611;db_xref=UniProtKB/Swiss-Prot:P0AEE3;db_xref=EcoGene:EG11652 EMBL gene 3383330 3384268 . - . ID=.7013;gene=mdh;locus_tag=b3236;gene_synonym=ECK3225;gene_synonym=JW3205;db_xref=EcoGene:EG10576 EMBL CDS 3383330 3384268 . - 0 ID=.7014;gene=mdh;locus_tag=b3236;gene_synonym=ECK3225;gene_synonym=JW3205;ec_number=1.1.1.37;function=enzyme%3B Energy metabolism%2C carbon: TCA cycle;experiment=N-terminus verified by Edman degradation: PMID 7028159%2C8506346%2C8670822%2C9298646%2C9600841%2C9740056;note=malate dehydrogenase%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0006099 - tricarboxylic acid cycle%3B GO_process: GO:0006113 - fermentation%3B GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0006094 - gluconeogenesis%3B GO_process: GO:0009436 - glyoxylate catabolic process;codon_start=1;transl_table=11;product=malate dehydrogenase%2C NAD(P)-binding;protein_id=AAC76268.1;db_xref=GI:1789632;db_xref=ASAP:ABE-0010613;db_xref=UniProtKB/Swiss-Prot:P61889;db_xref=EcoGene:EG10576 EMBL gene 3384703 3385173 . + . ID=.7015;gene=argR;locus_tag=b3237;gene_synonym=ECK3226;gene_synonym=JW3206;gene_synonym=Rarg;gene_synonym=xerA;db_xref=EcoGene:EG10070 EMBL CDS 3384703 3385173 . + 0 ID=.7016;gene=argR;locus_tag=b3237;gene_synonym=ECK3226;gene_synonym=JW3206;gene_synonym=Rarg;gene_synonym=xerA;function=regulator%3B Amino acid biosynthesis: Arginine;experiment=N-terminus verified by Edman degradation: PMID 3116542;note=repressor of arg regulon%3B cer-mediated site specific recombination%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006526 - arginine biosynthetic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=l-arginine-responsive arginine metabolism regulon transcriptional regulator;protein_id=AAC76269.1;db_xref=GI:1789633;db_xref=ASAP:ABE-0010620;db_xref=UniProtKB/Swiss-Prot:P0A6D0;db_xref=EcoGene:EG10070 EMBL gene 3385538 3385801 . + . ID=.7017;gene=yhcN;locus_tag=b3238;gene_synonym=ECK3227;gene_synonym=JW5540;db_xref=EcoGene:EG12820 EMBL CDS 3385538 3385801 . + 0 ID=.7018;gene=yhcN;locus_tag=b3238;gene_synonym=ECK3227;gene_synonym=JW5540;codon_start=1;transl_table=11;product=cadmium and peroxide resistance protein%2C stress-induced;protein_id=AAC76270.2;db_xref=GI:87082233;db_xref=ASAP:ABE-0010623;db_xref=UniProtKB/Swiss-Prot:P64614;db_xref=EcoGene:EG12820 EMBL gene 3385857 3386129 . - . ID=.7019;gene=yhcO;locus_tag=b3239;gene_synonym=ECK3228;gene_synonym=JW3208;db_xref=EcoGene:EG12821 EMBL CDS 3385857 3386129 . - 0 ID=.7020;gene=yhcO;locus_tag=b3239;gene_synonym=ECK3228;gene_synonym=JW3208;codon_start=1;transl_table=11;product=putative barnase inhibitor;protein_id=AAC76271.1;db_xref=GI:1789635;db_xref=ASAP:ABE-0010625;db_xref=UniProtKB/Swiss-Prot:P64616;db_xref=EcoGene:EG12821 EMBL gene 3386221 3388188 . - . ID=.7021;gene=aaeB;locus_tag=b3240;gene_synonym=ECK3229;gene_synonym=JW3209;gene_synonym=yhcP;db_xref=EcoGene:EG12822 EMBL CDS 3386221 3388188 . - 0 ID=.7022;gene=aaeB;locus_tag=b3240;gene_synonym=ECK3229;gene_synonym=JW3209;gene_synonym=yhcP;note=GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=p-hydroxybenzoic acid efflux system component;protein_id=AAC76272.1;db_xref=GI:1789636;db_xref=ASAP:ABE-0010629;db_xref=UniProtKB/Swiss-Prot:P46481;db_xref=EcoGene:EG12822 EMBL gene 3388194 3389126 . - . ID=.7023;gene=aaeA;locus_tag=b3241;gene_synonym=ECK3230;gene_synonym=JW3210;gene_synonym=yhcQ;db_xref=EcoGene:EG12823 EMBL CDS 3388194 3389126 . - 0 ID=.7024;gene=aaeA;locus_tag=b3241;gene_synonym=ECK3230;gene_synonym=JW3210;gene_synonym=yhcQ;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=p-hydroxybenzoic acid efflux system component;protein_id=AAC76273.1;db_xref=GI:1789637;db_xref=ASAP:ABE-0010631;db_xref=UniProtKB/Swiss-Prot:P46482;db_xref=EcoGene:EG12823 EMBL gene 3389134 3389337 . - . ID=.7025;gene=aaeX;locus_tag=b3242;gene_synonym=ECK3231;gene_synonym=JW5541;gene_synonym=yhcR;db_xref=EcoGene:EG12824 EMBL CDS 3389134 3389337 . - 0 ID=.7026;gene=aaeX;locus_tag=b3242;gene_synonym=ECK3231;gene_synonym=JW5541;gene_synonym=yhcR;codon_start=1;transl_table=11;product=DUF1656 family putative inner membrane efflux pump associated protein;protein_id=AAC76274.2;db_xref=GI:87082234;db_xref=ASAP:ABE-0010636;db_xref=UniProtKB/Swiss-Prot:P46478;db_xref=EcoGene:EG12824 EMBL gene 3389520 3390449 . + . ID=.7027;gene=aaeR;locus_tag=b3243;gene_synonym=ECK3232;gene_synonym=JW3212;gene_synonym=qseA;gene_synonym=yhcS;db_xref=EcoGene:EG12825 EMBL CDS 3389520 3390449 . + 0 ID=.7028;gene=aaeR;locus_tag=b3243;gene_synonym=ECK3232;gene_synonym=JW3212;gene_synonym=qseA;gene_synonym=yhcS;note=GO_function: GO:0016563 - transcription activator activity%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=transcriptional regulator for aaeXAB operon;protein_id=AAC76275.1;db_xref=GI:1789639;db_xref=ASAP:ABE-0010639;db_xref=UniProtKB/Swiss-Prot:P67662;db_xref=EcoGene:EG12825 EMBL gene 3390583 3392028 . - . ID=.7029;gene=tldD;locus_tag=b3244;gene_synonym=ECK3233;gene_synonym=JW3213;gene_synonym=yhdO;db_xref=EcoGene:EG12826 EMBL CDS 3390583 3392028 . - 0 ID=.7030;gene=tldD;locus_tag=b3244;gene_synonym=ECK3233;gene_synonym=JW3213;gene_synonym=yhdO;function=phenotype%3B Not classified;note=suppresses inhibitory activity of CsrA;codon_start=1;transl_table=11;product=putative peptidase;protein_id=AAC76276.1;db_xref=GI:1789640;db_xref=ASAP:ABE-0010642;db_xref=UniProtKB/Swiss-Prot:P0AGG8;db_xref=EcoGene:EG12826 EMBL repeat_region 3392076 3392383 . + . ID=.7031;note=REP245 (repetitive extragenic palindromic) element%3B contains 7 REP sequences EMBL gene 3392458 3396258 . - . ID=.7032;gene=yhdP;locus_tag=b4472;gene_synonym=ECK3234;gene_synonym=JW5542;gene_synonym=yhdQ;gene_synonym=yhdR;db_xref=EcoGene:EG12827 EMBL CDS 3392458 3396258 . - 0 ID=.7033;gene=yhdP;locus_tag=b4472;gene_synonym=ECK3234;gene_synonym=JW5542;gene_synonym=yhdQ;gene_synonym=yhdR;codon_start=1;transl_table=11;product=DUF3971-AsmA2 domains protein;protein_id=AAT48173.1;db_xref=GI:48994929;db_xref=ASAP:ABE-0174102;db_xref=UniProtKB/Swiss-Prot:P46474;db_xref=EcoGene:EG12827 EMBL gene 3396326 3397795 . - . ID=.7034;gene=rng;locus_tag=b3247;gene_synonym=adhR;gene_synonym=cafA;gene_synonym=ECK3235;gene_synonym=JW3216;gene_synonym=yhdF;db_xref=EcoGene:EG11299 EMBL CDS 3396326 3397795 . - 0 ID=.7035;gene=rng;locus_tag=b3247;gene_synonym=adhR;gene_synonym=cafA;gene_synonym=ECK3235;gene_synonym=JW3216;gene_synonym=yhdF;ec_number=3.1.4.-;function=structural component%3B Cell division;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009451 - RNA modification;codon_start=1;transl_table=11;product=ribonuclease G;protein_id=AAC76279.2;db_xref=GI:87082235;db_xref=ASAP:ABE-0010651;db_xref=UniProtKB/Swiss-Prot:P0A9J0;db_xref=EcoGene:EG11299 EMBL gene 3397785 3398378 . - . ID=.7036;gene=yhdE;locus_tag=b3248;gene_synonym=ECK3236;gene_synonym=JW3217;gene_synonym=maf;db_xref=EcoGene:EG11298 EMBL CDS 3397785 3398378 . - 0 ID=.7037;gene=yhdE;locus_tag=b3248;gene_synonym=ECK3236;gene_synonym=JW3217;gene_synonym=maf;codon_start=1;transl_table=11;product=dTTP/UTP pyrophosphatase%3B m(5)UTP/m(5)CTP/pseudo-UTP pyrophosphatase;protein_id=AAC76280.1;db_xref=GI:1789646;db_xref=ASAP:ABE-0010653;db_xref=UniProtKB/Swiss-Prot:P25536;db_xref=EcoGene:EG11298 EMBL gene 3398387 3398875 . - . ID=.7038;gene=mreD;locus_tag=b3249;gene_synonym=ECK3237;gene_synonym=JW3218;db_xref=EcoGene:EG10610 EMBL CDS 3398387 3398875 . - 0 ID=.7039;gene=mreD;locus_tag=b3249;gene_synonym=ECK3237;gene_synonym=JW3218;function=structural component%3B Murein sacculus%2C peptidoglycan;note=rod shape-determining protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009252 - peptidoglycan biosynthetic process;codon_start=1;transl_table=11;product=cell wall structural complex MreBCD transmembrane component MreD;protein_id=AAC76281.1;db_xref=GI:1789647;db_xref=ASAP:ABE-0010656;db_xref=UniProtKB/Swiss-Prot:P0ABH4;db_xref=EcoGene:EG10610 EMBL gene 3398875 3399978 . - . ID=.7040;gene=mreC;locus_tag=b3250;gene_synonym=ECK3238;gene_synonym=JW3219;db_xref=EcoGene:EG10609 EMBL CDS 3398875 3399978 . - 0 ID=.7041;gene=mreC;locus_tag=b3250;gene_synonym=ECK3238;gene_synonym=JW3219;function=structural component%3B Murein sacculus%2C peptidoglycan;note=rod shape-determining protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_process: GO:0009252 - peptidoglycan biosynthetic process;codon_start=1;transl_table=11;product=cell wall structural complex MreBCD transmembrane component MreC;protein_id=AAC76282.1;db_xref=GI:1789648;db_xref=ASAP:ABE-0010658;db_xref=UniProtKB/Swiss-Prot:P16926;db_xref=EcoGene:EG10609 EMBL gene 3400044 3401087 . - . ID=.7042;gene=mreB;locus_tag=b3251;gene_synonym=ECK3239;gene_synonym=envB;gene_synonym=JW3220;gene_synonym=mon;gene_synonym=rodY;db_xref=EcoGene:EG10608 EMBL CDS 3400044 3401087 . - 0 ID=.7043;gene=mreB;locus_tag=b3251;gene_synonym=ECK3239;gene_synonym=envB;gene_synonym=JW3220;gene_synonym=mon;gene_synonym=rodY;function=phenotype%3B Cell division;experiment=N-terminus verified by Edman degradation: PMID 3049542%2C9298646;note=regulator of ftsI%2C penicillin binding protein 3%2C septation function%3B GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=cell wall structural complex MreBCD%2C actin-like component MreB;protein_id=AAC76283.2;db_xref=GI:87082236;db_xref=ASAP:ABE-0010661;db_xref=UniProtKB/Swiss-Prot:P0A9X4;db_xref=EcoGene:EG10608 EMBL gene 3401392 3403332 . - . ID=.7044;gene=csrD;locus_tag=b3252;gene_synonym=ECK3240;gene_synonym=JW3221;gene_synonym=yhdA;db_xref=EcoGene:EG10018 EMBL CDS 3401392 3403332 . - 0 ID=.7045;gene=csrD;locus_tag=b3252;gene_synonym=ECK3240;gene_synonym=JW3221;gene_synonym=yhdA;codon_start=1;transl_table=11;product=targeting factor for csrBC sRNA degradation;protein_id=AAC76284.1;db_xref=GI:1789650;db_xref=ASAP:ABE-0010663;db_xref=UniProtKB/Swiss-Prot:P13518;db_xref=EcoGene:EG10018 EMBL gene 3403484 3404458 . + . ID=.7046;gene=acuI;locus_tag=b3253;gene_synonym=ECK3241;gene_synonym=JW3222;gene_synonym=yhdH;db_xref=EcoGene:EG11315 EMBL CDS 3403484 3404458 . + 0 ID=.7047;gene=acuI;locus_tag=b3253;gene_synonym=ECK3241;gene_synonym=JW3222;gene_synonym=yhdH;function=putative enzyme%3B Not classified;note=putative dehydrogenase;codon_start=1;transl_table=11;product=putative acryloyl-CoA reductase;protein_id=AAC76285.1;db_xref=GI:1789651;db_xref=ASAP:ABE-0010667;db_xref=UniProtKB/Swiss-Prot:P26646;db_xref=EcoGene:EG11315 EMBL gene 3404495 3404637 . + . ID=.7048;gene=yrdF;locus_tag=b4697;gene_synonym=ECK4509;pseudo=true;db_xref=EcoGene:EG14497 EMBL CDS 3404495 3404637 . + 0 ID=.7049;gene=yrdF;locus_tag=b4697;gene_synonym=ECK4509;note=pseudogene%2C conserved protein;pseudo=true;codon_start=1;transl_table=11;db_xref=EcoGene:EG14497 EMBL gene 3404638 3405031 . + . ID=.7050;gene=yrdE;locus_tag=b4646;gene_synonym=ECK4442;pseudo=true;db_xref=EcoGene:EG14352 EMBL biological_region 3404638 3405031 . + 0 ID=.7051;featflags=type:CDS;gene=yrdE;locus_tag=b4646;gene_synonym=ECK4442;note=pseudogene%2C yedZ paralog;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0285243;db_xref=EcoGene:EG14352 EMBL CDS 3404638 3404733 . + 0 Parent=.7051 EMBL CDS 3404732 3405031 . + 0 Parent=.7051 EMBL gene 3405436 3405906 . + . ID=.7054;gene=accB;locus_tag=b3255;gene_synonym=ECK3242;gene_synonym=fabE;gene_synonym=JW3223;db_xref=EcoGene:EG10275 EMBL CDS 3405436 3405906 . + 0 ID=.7055;gene=accB;locus_tag=b3255;gene_synonym=ECK3242;gene_synonym=fabE;gene_synonym=JW3223;function=carrier%3B Biosynthesis of cofactors%2C carriers: biotin carboxyl carrier protein (BCCP);experiment=N-terminus verified by Edman degradation: PMID 1370469%2C9740056;note=acetylCoA carboxylase%2C BCCP subunit%3B carrier of biotin%3B GO_process: GO:0042966 - biotin carboxyl carrier protein biosynthetic process;codon_start=1;transl_table=11;product=acetyl CoA carboxylase%2C BCCP subunit;protein_id=AAC76287.1;db_xref=GI:1789653;db_xref=ASAP:ABE-0010675;db_xref=UniProtKB/Swiss-Prot:P0ABD8;db_xref=EcoGene:EG10275 EMBL gene 3405917 3407266 . + . ID=.7056;gene=accC;locus_tag=b3256;gene_synonym=ECK3243;gene_synonym=fabG;gene_synonym=JW3224;db_xref=EcoGene:EG10276 EMBL CDS 3405917 3407266 . + 0 ID=.7057;gene=accC;locus_tag=b3256;gene_synonym=ECK3243;gene_synonym=fabG;gene_synonym=JW3224;ec_number=6.3.4.14;function=enzyme%3B Fatty acid and phosphatidic acid biosynthesis;experiment=N-terminus verified by Edman degradation: PMID 1370469%2C1682920%2C9298646;note=acetyl CoA carboxylase%2C biotin carboxylase subunit%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=acetyl-CoA carboxylase%2C biotin carboxylase subunit;protein_id=AAC76288.1;db_xref=GI:1789654;db_xref=ASAP:ABE-0010677;db_xref=UniProtKB/Swiss-Prot:P24182;db_xref=EcoGene:EG10276 EMBL gene 3407375 3407617 . + . ID=.7058;gene=yhdT;locus_tag=b3257;gene_synonym=ECK3244;gene_synonym=JW3225;db_xref=EcoGene:EG12831 EMBL CDS 3407375 3407617 . + 0 ID=.7059;gene=yhdT;locus_tag=b3257;gene_synonym=ECK3244;gene_synonym=JW3225;codon_start=1;transl_table=11;product=DUF997 family putative inner membrane protein;protein_id=AAC76289.1;db_xref=GI:1789655;db_xref=ASAP:ABE-0010690;db_xref=UniProtKB/Swiss-Prot:P45566;db_xref=EcoGene:EG12831 EMBL gene 3407607 3409058 . + . ID=.7060;gene=panF;locus_tag=b3258;gene_synonym=ECK3245;gene_synonym=JW3226;db_xref=EcoGene:EG10685 EMBL CDS 3407607 3409058 . + 0 ID=.7061;gene=panF;locus_tag=b3258;gene_synonym=ECK3245;gene_synonym=JW3226;function=transport%3B Transport of small molecules: Cations;note=sodium/pantothenate symporter%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0015937 - coenzyme A biosynthetic process;codon_start=1;transl_table=11;product=pantothenate:sodium symporter;protein_id=AAC76290.2;db_xref=GI:87082237;db_xref=ASAP:ABE-0010695;db_xref=UniProtKB/Swiss-Prot:P16256;db_xref=EcoGene:EG10685 EMBL gene 3409070 3409951 . + . ID=.7062;gene=prmA;locus_tag=b3259;gene_synonym=ECK3246;gene_synonym=JW3227;gene_synonym=prm-1;gene_synonym=yhdI;db_xref=EcoGene:EG11497 EMBL CDS 3409070 3409951 . + 0 ID=.7063;gene=prmA;locus_tag=b3259;gene_synonym=ECK3246;gene_synonym=JW3227;gene_synonym=prm-1;gene_synonym=yhdI;ec_number=2.1.1.-;function=enzyme%3B Ribosomal proteins - synthesis%2C modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009451 - RNA modification;codon_start=1;transl_table=11;product=methyltransferase for 50S ribosomal subunit protein L11;protein_id=AAC76291.1;db_xref=GI:2367208;db_xref=ASAP:ABE-0010697;db_xref=UniProtKB/Swiss-Prot:P0A8T1;db_xref=EcoGene:EG11497 EMBL gene 3410280 3411245 . + . ID=.7064;gene=dusB;locus_tag=b3260;gene_synonym=ECK3247;gene_synonym=JW3228;gene_synonym=yhdG;db_xref=EcoGene:EG11311 EMBL CDS 3410280 3411245 . + 0 ID=.7065;gene=dusB;locus_tag=b3260;gene_synonym=ECK3247;gene_synonym=JW3228;gene_synonym=yhdG;function=enzyme%3B tRNA modification;note=putative dehydrogenase;codon_start=1;transl_table=11;product=tRNA-dihydrouridine synthase B;protein_id=AAC76292.1;db_xref=GI:1789660;db_xref=ASAP:ABE-0010700;db_xref=UniProtKB/Swiss-Prot:P0ABT5;db_xref=EcoGene:EG11311 EMBL gene 3411271 3411567 . + . ID=.7066;gene=fis;locus_tag=b3261;gene_synonym=ECK3248;gene_synonym=JW3229;gene_synonym=nbp;db_xref=EcoGene:EG10317 EMBL CDS 3411271 3411567 . + 0 ID=.7067;gene=fis;locus_tag=b3261;gene_synonym=ECK3248;gene_synonym=JW3229;gene_synonym=nbp;function=factor%3B DNA - replication%2C repair%2C restriction/modification;experiment=N-terminus verified by Edman degradation: PMID 2835774%2C2837762%2C8809757;note=site-specific DNA inversion stimulation factor%3B DNA-binding protein%3B a trans activator for transcription%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006310 - DNA recombination;codon_start=1;transl_table=11;product=global DNA-binding transcriptional dual regulator;protein_id=AAC76293.1;db_xref=GI:1789661;db_xref=ASAP:ABE-0010703;db_xref=UniProtKB/Swiss-Prot:P0A6R3;db_xref=EcoGene:EG10317 EMBL gene 3411653 3412537 . + . ID=.7068;gene=yhdJ;locus_tag=b3262;gene_synonym=ccrM;gene_synonym=ECK3249;gene_synonym=JW5543;db_xref=EcoGene:EG11498 EMBL CDS 3411653 3412537 . + 0 ID=.7069;gene=yhdJ;locus_tag=b3262;gene_synonym=ccrM;gene_synonym=ECK3249;gene_synonym=JW5543;function=putative enzyme%3B Not classified;note=putative methyltransferase;codon_start=1;transl_table=11;product=DNA adenine methyltransferase%2C SAM-dependent;protein_id=AAC76294.2;db_xref=GI:87082238;db_xref=ASAP:ABE-0010706;db_xref=UniProtKB/Swiss-Prot:P28638;db_xref=EcoGene:EG11498 EMBL gene 3412621 3412800 . + . ID=.7070;gene=yhdU;locus_tag=b3263;gene_synonym=ECK3250;gene_synonym=JW3231;db_xref=EcoGene:EG12832 EMBL CDS 3412621 3412800 . + 0 ID=.7071;gene=yhdU;locus_tag=b3263;gene_synonym=ECK3250;gene_synonym=JW3231;codon_start=1;transl_table=11;product=putative membrane protein;protein_id=AAC76295.1;db_xref=GI:1789663;db_xref=ASAP:ABE-0010710;db_xref=UniProtKB/Swiss-Prot:P64619;db_xref=EcoGene:EG12832 EMBL gene 3412803 3413465 . - . ID=.7072;gene=acrS;locus_tag=b3264;gene_synonym=ECK3251;gene_synonym=envR;gene_synonym=JW3232;gene_synonym=yhdK;db_xref=EcoGene:EG11741 EMBL CDS 3412803 3413465 . - 0 ID=.7073;gene=acrS;locus_tag=b3264;gene_synonym=ECK3251;gene_synonym=envR;gene_synonym=JW3232;gene_synonym=yhdK;function=regulator%3B Not classified;note=putative transcriptional regulator%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription%3B GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=acrAB operon transcriptional repressor;protein_id=AAC76296.1;db_xref=GI:1789664;db_xref=ASAP:ABE-0010712;db_xref=UniProtKB/Swiss-Prot:P0ACT2;db_xref=EcoGene:EG11741 EMBL gene 3413864 3415021 . + . ID=.7074;gene=acrE;locus_tag=b3265;gene_synonym=ECK3252;gene_synonym=envC;gene_synonym=JW3233;db_xref=EcoGene:EG10266 EMBL CDS 3413864 3415021 . + 0 ID=.7075;gene=acrE;locus_tag=b3265;gene_synonym=ECK3252;gene_synonym=envC;gene_synonym=JW3233;function=membrane%3B Inner membrane;note=transmembrane protein affects septum formation and cell membrane permeability%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=cytoplasmic membrane lipoprotein;protein_id=AAC76297.1;db_xref=GI:1789665;db_xref=ASAP:ABE-0010722;db_xref=UniProtKB/Swiss-Prot:P24180;db_xref=EcoGene:EG10266 EMBL gene 3415033 3418137 . + . ID=.7076;gene=acrF;locus_tag=b3266;gene_synonym=ECK3253;gene_synonym=envD;gene_synonym=JW3234;db_xref=EcoGene:EG10267 EMBL CDS 3415033 3418137 . + 0 ID=.7077;gene=acrF;locus_tag=b3266;gene_synonym=ECK3253;gene_synonym=envD;gene_synonym=JW3234;function=membrane%3B Drug/analog sensitivity;note=integral transmembrane protein%3B acridine resistance%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=multidrug efflux system protein;protein_id=AAC76298.1;db_xref=GI:1789666;db_xref=ASAP:ABE-0010724;db_xref=UniProtKB/Swiss-Prot:P24181;db_xref=EcoGene:EG10267 EMBL gene 3418390 3418611 . + . ID=.7078;gene=yhdV;locus_tag=b3267;gene_synonym=ECK3254;gene_synonym=JW3235;db_xref=EcoGene:EG12833 EMBL CDS 3418390 3418611 . + 0 ID=.7079;gene=yhdV;locus_tag=b3267;gene_synonym=ECK3254;gene_synonym=JW3235;codon_start=1;transl_table=11;product=putative outer membrane protein;protein_id=AAC76299.1;db_xref=GI:1789667;db_xref=ASAP:ABE-0010728;db_xref=UniProtKB/Swiss-Prot:P64622;db_xref=EcoGene:EG12833 EMBL gene 3419042 3420066 . + . ID=.7080;gene=yhdW;locus_tag=b3268;gene_synonym=ECK3255;gene_synonym=JW3236;pseudo=true;db_xref=EcoGene:EG12834 EMBL biological_region 3419042 3420066 . + 0 ID=.7081;featflags=type:CDS;gene=yhdW;locus_tag=b3268;gene_synonym=ECK3255;gene_synonym=JW3236;note=pseudogene%2C ABC transporter periplasmic binding protein family%3Bputative transport%3B Not classified%3B putative periplasmic binding transport protein%3B periplasmic-binding component of ABC superfamily%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0009063 - cellular amino acid catabolic process;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0010731;db_xref=UniProtKB/Swiss-Prot:P45766;db_xref=EcoGene:EG12834 EMBL CDS 3419042 3419107 . + 0 Parent=.7081 EMBL CDS 3419107 3420066 . + 0 Parent=.7081 EMBL gene 3420134 3421315 . + . ID=.7084;gene=yhdX;locus_tag=b3269;gene_synonym=ECK3256;gene_synonym=JW5544;db_xref=EcoGene:EG12835 EMBL CDS 3420134 3421315 . + 0 ID=.7085;gene=yhdX;locus_tag=b3269;gene_synonym=ECK3256;gene_synonym=JW5544;function=putative transport%3B Not classified;note=putative transport system permease protein%3B membrane component of ABC superfamily%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative amino acid ABC transporter permease;protein_id=AAT48174.1;db_xref=GI:48994930;db_xref=ASAP:ABE-0010733;db_xref=UniProtKB/Swiss-Prot:P45767;db_xref=EcoGene:EG12835 EMBL gene 3421325 3422428 . + . ID=.7086;gene=yhdY;locus_tag=b3270;gene_synonym=ECK3257;gene_synonym=JW5545;db_xref=EcoGene:EG12836 EMBL CDS 3421325 3422428 . + 0 ID=.7087;gene=yhdY;locus_tag=b3270;gene_synonym=ECK3257;gene_synonym=JW5545;function=putative transport%3B Not classified;note=putative transport system permease protein%3B membrane component of ABC superfamily%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative amino acid ABC transporter permease;protein_id=AAC76302.2;db_xref=GI:87082239;db_xref=ASAP:ABE-0010736;db_xref=UniProtKB/Swiss-Prot:P45768;db_xref=EcoGene:EG12836 EMBL gene 3422436 3423194 . + . ID=.7088;gene=yhdZ;locus_tag=b3271;gene_synonym=ECK3258;gene_synonym=JW3239;db_xref=EcoGene:EG12837 EMBL CDS 3422436 3423194 . + 0 ID=.7089;gene=yhdZ;locus_tag=b3271;gene_synonym=ECK3258;gene_synonym=JW3239;function=putative transport%3B Not classified;note=putative ATP-binding component of a transport system%3B ATP-binding component of ABC superfamily%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=putative amino acid ABC transporter ATPase;protein_id=AAC76303.1;db_xref=GI:1789672;db_xref=ASAP:ABE-0010738;db_xref=UniProtKB/Swiss-Prot:P45769;db_xref=EcoGene:EG12837 EMBL gene 3423423 3423542 . - . ID=.7090;gene=rrfF;locus_tag=b3272;gene_synonym=ECK3259;gene_synonym=JWR0073;gene_synonym=rrfDbeta;gene_synonym=rrvD;db_xref=EcoGene:EG30091 EMBL rRNA 3423423 3423542 . - . ID=.7091;gene=rrfF;locus_tag=b3272;gene_synonym=ECK3259;gene_synonym=JWR0073;gene_synonym=rrfDbeta;gene_synonym=rrvD;product=5S ribosomal RNA of rrnD operon;db_xref=ASAP:ABE-0010740;db_xref=EcoGene:EG30091 EMBL gene 3423580 3423655 . - . ID=.7092;gene=thrV;locus_tag=b3273;gene_synonym=ECK3260;gene_synonym=JWR0074;db_xref=EcoGene:EG30103 EMBL tRNA 3423580 3423655 . - . ID=.7093;gene=thrV;locus_tag=b3273;gene_synonym=ECK3260;gene_synonym=JWR0074;product=tRNA-Thr;note=anticodon: GGU;db_xref=ASAP:ABE-0010742;db_xref=EcoGene:EG30103 EMBL gene 3423668 3423787 . - . ID=.7094;gene=rrfD;locus_tag=b3274;gene_synonym=ECK3261;gene_synonym=JWR0075;db_xref=EcoGene:EG30073 EMBL rRNA 3423668 3423787 . - . ID=.7095;gene=rrfD;locus_tag=b3274;gene_synonym=ECK3261;gene_synonym=JWR0075;product=5S ribosomal RNA of rrnD operon;db_xref=ASAP:ABE-0010744;db_xref=EcoGene:EG30073 EMBL gene 3423880 3426783 . - . ID=.7096;gene=rrlD;locus_tag=b3275;gene_synonym=ECK3262;gene_synonym=JWR0076;db_xref=EcoGene:EG30080 EMBL rRNA 3423880 3426783 . - . ID=.7097;gene=rrlD;locus_tag=b3275;gene_synonym=ECK3262;gene_synonym=JWR0076;product=23S ribosomal RNA of rrnD operon;db_xref=ASAP:ABE-0010746;db_xref=EcoGene:EG30080 EMBL gene 3426958 3427033 . - . ID=.7098;gene=alaU;locus_tag=b3276;gene_synonym=ECK3263;gene_synonym=JWR0077;gene_synonym=talD;db_xref=EcoGene:EG30009 EMBL tRNA 3426958 3427033 . - . ID=.7099;gene=alaU;locus_tag=b3276;gene_synonym=ECK3263;gene_synonym=JWR0077;gene_synonym=talD;product=tRNA-Ala;note=anticodon: UGC;db_xref=ASAP:ABE-0010748;db_xref=EcoGene:EG30009 EMBL gene 3427076 3427152 . - . ID=.7100;gene=ileU;locus_tag=b3277;gene_synonym=ECK3264;gene_synonym=JWR0078;gene_synonym=tilD;db_xref=EcoGene:EG30044 EMBL tRNA 3427076 3427152 . - . ID=.7101;gene=ileU;locus_tag=b3277;gene_synonym=ECK3264;gene_synonym=JWR0078;gene_synonym=tilD;product=tRNA-Ile;note=anticodon: GAU;db_xref=ASAP:ABE-0010750;db_xref=EcoGene:EG30044 EMBL gene 3427221 3428762 . - . ID=.7102;gene=rrsD;locus_tag=b3278;gene_synonym=ECK3265;gene_synonym=JWR0079;db_xref=EcoGene:EG30087 EMBL rRNA 3427221 3428762 . - . ID=.7103;gene=rrsD;locus_tag=b3278;gene_synonym=ECK3265;gene_synonym=JWR0079;product=16S ribosomal RNA of rrnD operon;db_xref=ASAP:ABE-0010753;db_xref=EcoGene:EG30087 EMBL gene 3429236 3429790 . + . ID=.7104;gene=yrdA;locus_tag=b3279;gene_synonym=ECK3266;gene_synonym=JW5710;db_xref=EcoGene:EG12838 EMBL CDS 3429236 3429790 . + 0 ID=.7105;gene=yrdA;locus_tag=b3279;gene_synonym=ECK3266;gene_synonym=JW5710;function=putative enzyme%3B Not classified;note=putative transferase;codon_start=1;transl_table=11;product=bacterial transferase hexapeptide domain protein;protein_id=AAC76304.2;db_xref=GI:87082240;db_xref=ASAP:ABE-0010759;db_xref=UniProtKB/Swiss-Prot:P0A9W9;db_xref=EcoGene:EG12838 EMBL gene 3429766 3430023 . - . ID=.7106;gene=yrdB;locus_tag=b3280;gene_synonym=ECK3267;gene_synonym=JW3241;db_xref=EcoGene:EG12839 EMBL CDS 3429766 3430023 . - 0 ID=.7107;gene=yrdB;locus_tag=b3280;gene_synonym=ECK3267;gene_synonym=JW3241;codon_start=1;transl_table=11;product=DUF1488 family protein;protein_id=AAC76305.1;db_xref=GI:1789674;db_xref=ASAP:ABE-0010761;db_xref=UniProtKB/Swiss-Prot:P45795;db_xref=EcoGene:EG12839 EMBL gene 3430020 3430838 . - . ID=.7108;gene=aroE;locus_tag=b3281;gene_synonym=ECK3268;gene_synonym=JW3242;db_xref=EcoGene:EG10077 EMBL CDS 3430020 3430838 . - 0 ID=.7109;gene=aroE;locus_tag=b3281;gene_synonym=ECK3268;gene_synonym=JW3242;ec_number=1.1.1.25;function=enzyme%3B Amino acid biosynthesis: Chorismate;experiment=N-terminus verified by Edman degradation: PMID 3277621;note=dehydroshikimate reductase%3B GO_process: GO:0009423 - chorismate biosynthetic process;codon_start=1;transl_table=11;product=dehydroshikimate reductase%2C NAD(P)-binding;protein_id=AAC76306.1;db_xref=GI:1789675;db_xref=ASAP:ABE-0010763;db_xref=UniProtKB/Swiss-Prot:P15770;db_xref=EcoGene:EG10077 EMBL gene 3430843 3431415 . - . ID=.7110;gene=tsaC;locus_tag=b3282;gene_synonym=ECK3269;gene_synonym=JW3243;gene_synonym=rimN;gene_synonym=yrdC;db_xref=EcoGene:EG12840 EMBL CDS 3430843 3431415 . - 0 ID=.7111;gene=tsaC;locus_tag=b3282;gene_synonym=ECK3269;gene_synonym=JW3243;gene_synonym=rimN;gene_synonym=yrdC;function=enzyme%3B tRNA modification;codon_start=1;transl_table=11;product=tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein%2C threonine-dependent ADP-forming ATPase;protein_id=AAC76307.1;db_xref=GI:2367210;db_xref=ASAP:ABE-0010766;db_xref=UniProtKB/Swiss-Prot:P45748;db_xref=EcoGene:EG12840 EMBL gene 3431420 3431962 . - . ID=.7112;gene=yrdD;locus_tag=b3283;gene_synonym=ECK3270;gene_synonym=JW5949;db_xref=EcoGene:EG12841 EMBL CDS 3431420 3431962 . - 0 ID=.7113;gene=yrdD;locus_tag=b3283;gene_synonym=ECK3270;gene_synonym=JW5949;function=putative enzyme%3B Not classified;note=putative DNA topoisomerase;codon_start=1;transl_table=11;product=ssDNA-binding protein%2C function unknown;protein_id=AAT48175.1;db_xref=GI:48994931;db_xref=ASAP:ABE-0010768;db_xref=UniProtKB/Swiss-Prot:P45771;db_xref=EcoGene:EG12841 EMBL gene 3431991 3432464 . - . ID=.7114;gene=smg;locus_tag=b3284;gene_synonym=ECK3271;gene_synonym=JW3245;db_xref=EcoGene:EG11605 EMBL CDS 3431991 3432464 . - 0 ID=.7115;gene=smg;locus_tag=b3284;gene_synonym=ECK3271;gene_synonym=JW3245;codon_start=1;transl_table=11;product=DUF494 family putative periplasmic protein;protein_id=AAC76309.1;db_xref=GI:1789679;db_xref=ASAP:ABE-0010770;db_xref=UniProtKB/Swiss-Prot:P0A828;db_xref=EcoGene:EG11605 EMBL gene 3432436 3433560 . - . ID=.7116;gene=smf;locus_tag=b4473;gene_synonym=ECK3272;gene_synonym=JW5708;db_xref=EcoGene:EG11604 EMBL CDS 3432436 3433560 . - 0 ID=.7117;gene=smf;locus_tag=b4473;gene_synonym=ECK3272;gene_synonym=JW5708;codon_start=1;transl_table=11;product=DNA recombination-mediator A family protein;protein_id=AAT48176.1;db_xref=GI:48994932;db_xref=ASAP:ABE-0174103;db_xref=UniProtKB/Swiss-Prot:P30852;db_xref=EcoGene:EG11604 EMBL gene 3433690 3434199 . + . ID=.7118;gene=def;locus_tag=b3287;gene_synonym=ECK3273;gene_synonym=fms;gene_synonym=JW3248;db_xref=EcoGene:EG11440 EMBL CDS 3433690 3434199 . + 0 ID=.7119;gene=def;locus_tag=b3287;gene_synonym=ECK3273;gene_synonym=fms;gene_synonym=JW3248;ec_number=3.5.1.88;function=enzyme%3B Proteins - translation and modification;note=GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=peptide deformylase;protein_id=AAC76312.1;db_xref=GI:1789682;db_xref=ASAP:ABE-0010779;db_xref=UniProtKB/Swiss-Prot:P0A6K3;db_xref=EcoGene:EG11440 EMBL gene 3434214 3435161 . + . ID=.7120;gene=fmt;locus_tag=b3288;gene_synonym=ECK3274;gene_synonym=JW3249;gene_synonym=yhdD;db_xref=EcoGene:EG11268 EMBL CDS 3434214 3435161 . + 0 ID=.7121;gene=fmt;locus_tag=b3288;gene_synonym=ECK3274;gene_synonym=JW3249;gene_synonym=yhdD;ec_number=2.1.2.9;function=enzyme%3B Aminoacyl tRNA synthetases%2C tRNA modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009451 - RNA modification;codon_start=1;transl_table=11;product=10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferase;protein_id=AAC76313.1;db_xref=GI:1789683;db_xref=ASAP:ABE-0010781;db_xref=UniProtKB/Swiss-Prot:P23882;db_xref=EcoGene:EG11268 EMBL gene 3435207 3436496 . + . ID=.7122;gene=rsmB;locus_tag=b3289;gene_synonym=ECK3275;gene_synonym=fmu;gene_synonym=fmv;gene_synonym=JW3250;gene_synonym=rrmB;gene_synonym=sun;gene_synonym=yhdB;db_xref=EcoGene:EG12163 EMBL CDS 3435207 3436496 . + 0 ID=.7123;gene=rsmB;locus_tag=b3289;gene_synonym=ECK3275;gene_synonym=fmu;gene_synonym=fmv;gene_synonym=JW3250;gene_synonym=rrmB;gene_synonym=sun;gene_synonym=yhdB;ec_number=2.1.1.61;function=enzyme%3B rRNA modification;experiment=N-terminus verified by Edman degradation: PMID 10026269;note=16S rRNA m5C967 methyltransferase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009451 - RNA modification;codon_start=1;transl_table=11;product=16S rRNA m(5)C967 methyltransferase%2C SAM-dependent;protein_id=AAC76314.1;db_xref=GI:2367212;db_xref=ASAP:ABE-0010785;db_xref=UniProtKB/Swiss-Prot:P36929;db_xref=EcoGene:EG12163 EMBL gene 3436518 3437894 . + . ID=.7124;gene=trkA;locus_tag=b3290;gene_synonym=ECK3276;gene_synonym=JW3251;gene_synonym=sapG;db_xref=EcoGene:EG11019 EMBL CDS 3436518 3437894 . + 0 ID=.7125;gene=trkA;locus_tag=b3290;gene_synonym=ECK3276;gene_synonym=JW3251;gene_synonym=sapG;function=transport%3B Transport of small molecules: Cations;experiment=N-terminus verified by Edman degradation: PMID 8412700;note=transport of potassium%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=NAD-binding component of TrK potassium transporter;protein_id=AAC76315.1;db_xref=GI:1789685;db_xref=ASAP:ABE-0010787;db_xref=UniProtKB/Swiss-Prot:P0AGI8;db_xref=EcoGene:EG11019 EMBL gene 3438024 3438434 . + . ID=.7126;gene=mscL;locus_tag=b3291;gene_synonym=ECK3277;gene_synonym=JW3252;gene_synonym=stkA;gene_synonym=yhdC;db_xref=EcoGene:EG11180 EMBL CDS 3438024 3438434 . + 0 ID=.7127;gene=mscL;locus_tag=b3291;gene_synonym=ECK3277;gene_synonym=JW3252;gene_synonym=stkA;gene_synonym=yhdC;function=transport%3B Transport of small molecules: Other;experiment=N-terminus verified by Edman degradation: PMID 7511799;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=mechanosensitive channel protein%2C high conductance;protein_id=AAC76316.1;db_xref=GI:1789686;db_xref=ASAP:ABE-0010790;db_xref=UniProtKB/Swiss-Prot:P0A742;db_xref=EcoGene:EG11180 EMBL gene 3438431 3438649 . - . ID=.7128;gene=arfA;locus_tag=b4550;gene_synonym=ECK3278;gene_synonym=JW3253;gene_synonym=yhdL;db_xref=EcoGene:EG11968 EMBL CDS 3438431 3438649 . - 0 ID=.7129;gene=arfA;locus_tag=b4550;gene_synonym=ECK3278;gene_synonym=JW3253;gene_synonym=yhdL;note=GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=alternate ribosome-rescue factor A;protein_id=ABD18700.1;db_xref=GI:87082241;db_xref=ASAP:ABE-0285071;db_xref=UniProtKB/Swiss-Prot:P36675;db_xref=EcoGene:EG11968 EMBL gene 3438705 3439130 . - . ID=.7130;gene=zntR;locus_tag=b3292;gene_synonym=ECK3279;gene_synonym=JW3254;gene_synonym=yhdM;db_xref=EcoGene:EG11969 EMBL CDS 3438705 3439130 . - 0 ID=.7131;gene=zntR;locus_tag=b3292;gene_synonym=ECK3279;gene_synonym=JW3254;gene_synonym=yhdM;function=putative regulator%3B Not classified;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0006350 - transcription%3B GO_process: GO:0006805 - xenobiotic metabolic process;codon_start=1;transl_table=11;product=zntA gene transcriptional activator;protein_id=AAC76317.1;db_xref=GI:1789687;db_xref=ASAP:ABE-0010793;db_xref=UniProtKB/Swiss-Prot:P0ACS5;db_xref=EcoGene:EG11969 EMBL gene 3439141 3439509 . - . ID=.7132;gene=yhdN;locus_tag=b3293;gene_synonym=ECK3280;gene_synonym=JW3255;db_xref=EcoGene:EG11970 EMBL CDS 3439141 3439509 . - 0 ID=.7133;gene=yhdN;locus_tag=b3293;gene_synonym=ECK3280;gene_synonym=JW3255;codon_start=1;transl_table=11;product=DUF1992 family protein;protein_id=AAC76318.1;db_xref=GI:1789688;db_xref=ASAP:ABE-0010795;db_xref=UniProtKB/Swiss-Prot:P36677;db_xref=EcoGene:EG11970 EMBL gene 3439616 3439999 . - . ID=.7134;gene=rplQ;locus_tag=b3294;gene_synonym=ECK3281;gene_synonym=JW3256;db_xref=EcoGene:EG10878 EMBL CDS 3439616 3439999 . - 0 ID=.7135;gene=rplQ;locus_tag=b3294;gene_synonym=ECK3281;gene_synonym=JW3256;function=structural component%3B Ribosomal proteins - synthesis%2C modification;experiment=N-terminus verified by Edman degradation: PMID 1098937%2C10739205;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0003735 - structural constituent of ribosome%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=50S ribosomal subunit protein L17;protein_id=AAC76319.1;db_xref=GI:1789689;db_xref=ASAP:ABE-0010799;db_xref=UniProtKB/Swiss-Prot:P0AG44;db_xref=EcoGene:EG10878 EMBL gene 3440040 3441029 . - . ID=.7136;gene=rpoA;locus_tag=b3295;gene_synonym=ECK3282;gene_synonym=JW3257;gene_synonym=pez;gene_synonym=phs;gene_synonym=sez;db_xref=EcoGene:EG10893 EMBL CDS 3440040 3441029 . - 0 ID=.7137;gene=rpoA;locus_tag=b3295;gene_synonym=ECK3282;gene_synonym=JW3257;gene_synonym=pez;gene_synonym=phs;gene_synonym=sez;ec_number=2.7.7.6;function=enzyme%3B RNA synthesis%2C modification%2C DNA transcription;experiment=N-terminus verified by Edman degradation: PMID 387752%2C1095419%2C9298646;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=RNA polymerase%2C alpha subunit;protein_id=AAC76320.1;db_xref=GI:1789690;db_xref=ASAP:ABE-0010802;db_xref=UniProtKB/Swiss-Prot:P0A7Z4;db_xref=EcoGene:EG10893 EMBL gene 3441055 3441675 . - . ID=.7138;gene=rpsD;locus_tag=b3296;gene_synonym=ECK3283;gene_synonym=JW3258;gene_synonym=ramA;gene_synonym=sud;db_xref=EcoGene:EG10903 EMBL CDS 3441055 3441675 . - 0 ID=.7139;gene=rpsD;locus_tag=b3296;gene_synonym=ECK3283;gene_synonym=JW3258;gene_synonym=ramA;gene_synonym=sud;function=structural component%3B Ribosomal proteins - synthesis%2C modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0003735 - structural constituent of ribosome%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=30S ribosomal subunit protein S4;protein_id=AAC76321.1;db_xref=GI:1789691;db_xref=ASAP:ABE-0010805;db_xref=UniProtKB/Swiss-Prot:P0A7V8;db_xref=EcoGene:EG10903 EMBL gene 3441709 3442098 . - . ID=.7140;gene=rpsK;locus_tag=b3297;gene_synonym=ECK3284;gene_synonym=JW3259;db_xref=EcoGene:EG10910 EMBL CDS 3441709 3442098 . - 0 ID=.7141;gene=rpsK;locus_tag=b3297;gene_synonym=ECK3284;gene_synonym=JW3259;function=structural component%3B Ribosomal proteins - synthesis%2C modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0003735 - structural constituent of ribosome%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=30S ribosomal subunit protein S11;protein_id=AAC76322.1;db_xref=GI:1789692;db_xref=ASAP:ABE-0010807;db_xref=UniProtKB/Swiss-Prot:P0A7R9;db_xref=EcoGene:EG10910 EMBL gene 3442115 3442471 . - . ID=.7142;gene=rpsM;locus_tag=b3298;gene_synonym=ECK3285;gene_synonym=JW3260;db_xref=EcoGene:EG10912 EMBL CDS 3442115 3442471 . - 0 ID=.7143;gene=rpsM;locus_tag=b3298;gene_synonym=ECK3285;gene_synonym=JW3260;function=structural component%3B Ribosomal proteins - synthesis%2C modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0003735 - structural constituent of ribosome%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=30S ribosomal subunit protein S13;protein_id=AAC76323.1;db_xref=GI:1789693;db_xref=ASAP:ABE-0010809;db_xref=UniProtKB/Swiss-Prot:P0A7S9;db_xref=EcoGene:EG10912 EMBL gene 3442618 3442734 . - . ID=.7144;gene=rpmJ;locus_tag=b3299;gene_synonym=ECK3286;gene_synonym=JW3261;gene_synonym=secX;db_xref=EcoGene:EG11232 EMBL CDS 3442618 3442734 . - 0 ID=.7145;gene=rpmJ;locus_tag=b3299;gene_synonym=ECK3286;gene_synonym=JW3261;gene_synonym=secX;function=structural component%3B Ribosomal proteins - synthesis%2C modification;experiment=N-terminus verified by Edman degradation: PMID 3542048%2C10739205;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0003735 - structural constituent of ribosome%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=50S ribosomal subunit protein L36;protein_id=AAC76324.1;db_xref=GI:1789695;db_xref=ASAP:ABE-0010812;db_xref=UniProtKB/Swiss-Prot:P0A7Q6;db_xref=EcoGene:EG11232 EMBL gene 3442766 3444097 . - . ID=.7146;gene=secY;locus_tag=b3300;gene_synonym=ECK3287;gene_synonym=JW3262;gene_synonym=prlA;db_xref=EcoGene:EG10766 EMBL CDS 3442766 3444097 . - 0 ID=.7147;gene=secY;locus_tag=b3300;gene_synonym=ECK3287;gene_synonym=JW3262;gene_synonym=prlA;function=putative transport%3B Not classified;note=putative ATPase subunit of translocase%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=preprotein translocase membrane subunit;protein_id=AAC76325.1;db_xref=GI:1789696;db_xref=ASAP:ABE-0010814;db_xref=UniProtKB/Swiss-Prot:P0AGA2;db_xref=EcoGene:EG10766 EMBL gene 3444105 3444539 . - . ID=.7148;gene=rplO;locus_tag=b3301;gene_synonym=ECK3288;gene_synonym=JW3263;db_xref=EcoGene:EG10876 EMBL CDS 3444105 3444539 . - 0 ID=.7149;gene=rplO;locus_tag=b3301;gene_synonym=ECK3288;gene_synonym=JW3263;function=structural component%3B Ribosomal proteins - synthesis%2C modification;experiment=N-terminus verified by Edman degradation: PMID 340263;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0003735 - structural constituent of ribosome%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=50S ribosomal subunit protein L15;protein_id=AAC76326.1;db_xref=GI:1789697;db_xref=ASAP:ABE-0010819;db_xref=UniProtKB/Swiss-Prot:P02413;db_xref=EcoGene:EG10876 EMBL gene 3444543 3444722 . - . ID=.7150;gene=rpmD;locus_tag=b3302;gene_synonym=ECK3289;gene_synonym=JW3264;db_xref=EcoGene:EG10888 EMBL CDS 3444543 3444722 . - 0 ID=.7151;gene=rpmD;locus_tag=b3302;gene_synonym=ECK3289;gene_synonym=JW3264;function=structural component%3B Ribosomal proteins - synthesis%2C modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0003735 - structural constituent of ribosome%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=50S ribosomal subunit protein L30;protein_id=AAC76327.1;db_xref=GI:1789698;db_xref=ASAP:ABE-0010821;db_xref=UniProtKB/Swiss-Prot:P0AG51;db_xref=EcoGene:EG10888 EMBL gene 3444726 3445229 . - . ID=.7152;gene=rpsE;locus_tag=b3303;gene_synonym=ECK3290;gene_synonym=eps;gene_synonym=JW3265;gene_synonym=spc;gene_synonym=spcA;db_xref=EcoGene:EG10904 EMBL CDS 3444726 3445229 . - 0 ID=.7153;gene=rpsE;locus_tag=b3303;gene_synonym=ECK3290;gene_synonym=eps;gene_synonym=JW3265;gene_synonym=spc;gene_synonym=spcA;function=structural component%3B Ribosomal proteins - synthesis%2C modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0003735 - structural constituent of ribosome%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=30S ribosomal subunit protein S5;protein_id=AAC76328.1;db_xref=GI:1789699;db_xref=ASAP:ABE-0010823;db_xref=UniProtKB/Swiss-Prot:P0A7W1;db_xref=EcoGene:EG10904 EMBL gene 3445244 3445597 . - . ID=.7154;gene=rplR;locus_tag=b3304;gene_synonym=ECK3291;gene_synonym=JW3266;db_xref=EcoGene:EG10879 EMBL CDS 3445244 3445597 . - 0 ID=.7155;gene=rplR;locus_tag=b3304;gene_synonym=ECK3291;gene_synonym=JW3266;function=structural component%3B Ribosomal proteins - synthesis%2C modification;experiment=N-terminus verified by Edman degradation: PMID 1098937%2C10739205;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0003735 - structural constituent of ribosome%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=50S ribosomal subunit protein L18;protein_id=AAC76329.1;db_xref=GI:1789700;db_xref=ASAP:ABE-0010825;db_xref=UniProtKB/Swiss-Prot:P0C018;db_xref=EcoGene:EG10879 EMBL gene 3445607 3446140 . - . ID=.7156;gene=rplF;locus_tag=b3305;gene_synonym=ECK3292;gene_synonym=JW3267;db_xref=EcoGene:EG10869 EMBL CDS 3445607 3446140 . - 0 ID=.7157;gene=rplF;locus_tag=b3305;gene_synonym=ECK3292;gene_synonym=JW3267;function=structural component%3B Ribosomal proteins - synthesis%2C modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0003735 - structural constituent of ribosome%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=50S ribosomal subunit protein L6;protein_id=AAC76330.1;db_xref=GI:1789701;db_xref=ASAP:ABE-0010827;db_xref=UniProtKB/Swiss-Prot:P0AG55;db_xref=EcoGene:EG10869 EMBL gene 3446153 3446545 . - . ID=.7158;gene=rpsH;locus_tag=b3306;gene_synonym=ECK3293;gene_synonym=JW3268;db_xref=EcoGene:EG10907 EMBL CDS 3446153 3446545 . - 0 ID=.7159;gene=rpsH;locus_tag=b3306;gene_synonym=ECK3293;gene_synonym=JW3268;function=structural component%3B Ribosomal proteins - synthesis%2C modification;note=30S ribosomal subunit protein S8%2C and regulator%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0003735 - structural constituent of ribosome%3B GO_process: GO:0006412 - translation%3B GO_process: GO:0009386 - translational attenuation;codon_start=1;transl_table=11;product=30S ribosomal subunit protein S8;protein_id=AAC76331.1;db_xref=GI:1789702;db_xref=ASAP:ABE-0010829;db_xref=UniProtKB/Swiss-Prot:P0A7W7;db_xref=EcoGene:EG10907 EMBL gene 3446579 3446884 . - . ID=.7160;gene=rpsN;locus_tag=b3307;gene_synonym=ECK3294;gene_synonym=JW3269;db_xref=EcoGene:EG10913 EMBL CDS 3446579 3446884 . - 0 ID=.7161;gene=rpsN;locus_tag=b3307;gene_synonym=ECK3294;gene_synonym=JW3269;function=structural component%3B Ribosomal proteins - synthesis%2C modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0003735 - structural constituent of ribosome%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=30S ribosomal subunit protein S14;protein_id=AAC76332.1;db_xref=GI:1789703;db_xref=ASAP:ABE-0010831;db_xref=UniProtKB/Swiss-Prot:P0AG59;db_xref=EcoGene:EG10913 EMBL gene 3446899 3447438 . - . ID=.7162;gene=rplE;locus_tag=b3308;gene_synonym=ECK3295;gene_synonym=JW3270;db_xref=EcoGene:EG10868 EMBL CDS 3446899 3447438 . - 0 ID=.7163;gene=rplE;locus_tag=b3308;gene_synonym=ECK3295;gene_synonym=JW3270;function=structural component%3B Ribosomal proteins - synthesis%2C modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0003735 - structural constituent of ribosome%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=50S ribosomal subunit protein L5;protein_id=AAC76333.1;db_xref=GI:1789704;db_xref=ASAP:ABE-0010833;db_xref=UniProtKB/Swiss-Prot:P62399;db_xref=EcoGene:EG10868 EMBL gene 3447453 3447767 . - . ID=.7164;gene=rplX;locus_tag=b3309;gene_synonym=ECK3296;gene_synonym=JW3271;db_xref=EcoGene:EG10884 EMBL CDS 3447453 3447767 . - 0 ID=.7165;gene=rplX;locus_tag=b3309;gene_synonym=ECK3296;gene_synonym=JW3271;function=structural component%3B Ribosomal proteins - synthesis%2C modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0003735 - structural constituent of ribosome%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=50S ribosomal subunit protein L24;protein_id=AAC76334.1;db_xref=GI:1789705;db_xref=ASAP:ABE-0010835;db_xref=UniProtKB/Swiss-Prot:P60624;db_xref=EcoGene:EG10884 EMBL gene 3447778 3448149 . - . ID=.7166;gene=rplN;locus_tag=b3310;gene_synonym=ECK3297;gene_synonym=JW3272;db_xref=EcoGene:EG10875 EMBL CDS 3447778 3448149 . - 0 ID=.7167;gene=rplN;locus_tag=b3310;gene_synonym=ECK3297;gene_synonym=JW3272;function=structural component%3B Ribosomal proteins - synthesis%2C modification;experiment=N-terminus verified by Edman degradation: PMID 352727;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0003735 - structural constituent of ribosome%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=50S ribosomal subunit protein L14;protein_id=AAC76335.1;db_xref=GI:1789706;db_xref=ASAP:ABE-0010837;db_xref=UniProtKB/Swiss-Prot:P0ADY3;db_xref=EcoGene:EG10875 EMBL gene 3448314 3448568 . - . ID=.7168;gene=rpsQ;locus_tag=b3311;gene_synonym=ECK3298;gene_synonym=JW3273;gene_synonym=neaA;db_xref=EcoGene:EG10916 EMBL CDS 3448314 3448568 . - 0 ID=.7169;gene=rpsQ;locus_tag=b3311;gene_synonym=ECK3298;gene_synonym=JW3273;gene_synonym=neaA;function=structural component%3B Ribosomal proteins - synthesis%2C modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0003735 - structural constituent of ribosome%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=30S ribosomal subunit protein S17;protein_id=AAC76336.1;db_xref=GI:1789707;db_xref=ASAP:ABE-0010840;db_xref=UniProtKB/Swiss-Prot:P0AG63;db_xref=EcoGene:EG10916 EMBL gene 3448568 3448759 . - . ID=.7170;gene=rpmC;locus_tag=b3312;gene_synonym=ECK3299;gene_synonym=JW3274;db_xref=EcoGene:EG10887 EMBL CDS 3448568 3448759 . - 0 ID=.7171;gene=rpmC;locus_tag=b3312;gene_synonym=ECK3299;gene_synonym=JW3274;function=structural component%3B Ribosomal proteins - synthesis%2C modification;experiment=N-terminus verified by Edman degradation: PMID 1092361%2C10739205;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0003735 - structural constituent of ribosome%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=50S ribosomal subunit protein L29;protein_id=AAC76337.1;db_xref=GI:1789708;db_xref=ASAP:ABE-0010842;db_xref=UniProtKB/Swiss-Prot:P0A7M6;db_xref=EcoGene:EG10887 EMBL gene 3448759 3449169 . - . ID=.7172;gene=rplP;locus_tag=b3313;gene_synonym=ECK3300;gene_synonym=JW3275;db_xref=EcoGene:EG10877 EMBL CDS 3448759 3449169 . - 0 ID=.7173;gene=rplP;locus_tag=b3313;gene_synonym=ECK3300;gene_synonym=JW3275;function=structural component%3B Ribosomal proteins - synthesis%2C modification;experiment=N-terminus verified by Edman degradation: PMID 786730;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0003735 - structural constituent of ribosome%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=50S ribosomal subunit protein L16;protein_id=AAC76338.1;db_xref=GI:1789709;db_xref=ASAP:ABE-0010846;db_xref=UniProtKB/Swiss-Prot:P0ADY7;db_xref=EcoGene:EG10877 EMBL gene 3449182 3449883 . - . ID=.7174;gene=rpsC;locus_tag=b3314;gene_synonym=ECK3301;gene_synonym=JW3276;db_xref=EcoGene:EG10902 EMBL CDS 3449182 3449883 . - 0 ID=.7175;gene=rpsC;locus_tag=b3314;gene_synonym=ECK3301;gene_synonym=JW3276;function=structural component%3B Ribosomal proteins - synthesis%2C modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0003735 - structural constituent of ribosome%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=30S ribosomal subunit protein S3;protein_id=AAC76339.1;db_xref=GI:1789710;db_xref=ASAP:ABE-0010848;db_xref=UniProtKB/Swiss-Prot:P0A7V3;db_xref=EcoGene:EG10902 EMBL gene 3449901 3450233 . - . ID=.7176;gene=rplV;locus_tag=b3315;gene_synonym=ECK3302;gene_synonym=eryB;gene_synonym=JW3277;db_xref=EcoGene:EG10882 EMBL CDS 3449901 3450233 . - 0 ID=.7177;gene=rplV;locus_tag=b3315;gene_synonym=ECK3302;gene_synonym=eryB;gene_synonym=JW3277;function=structural component%3B Ribosomal proteins - synthesis%2C modification;experiment=N-terminus verified by Edman degradation: PMID 7007072;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0003735 - structural constituent of ribosome%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=50S ribosomal subunit protein L22;protein_id=AAC76340.1;db_xref=GI:1789711;db_xref=ASAP:ABE-0010850;db_xref=UniProtKB/Swiss-Prot:P61175;db_xref=EcoGene:EG10882 EMBL gene 3450248 3450526 . - . ID=.7178;gene=rpsS;locus_tag=b3316;gene_synonym=ECK3303;gene_synonym=JW3278;db_xref=EcoGene:EG10918 EMBL CDS 3450248 3450526 . - 0 ID=.7179;gene=rpsS;locus_tag=b3316;gene_synonym=ECK3303;gene_synonym=JW3278;function=structural component%3B Ribosomal proteins - synthesis%2C modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0003735 - structural constituent of ribosome%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=30S ribosomal subunit protein S19;protein_id=AAC76341.1;db_xref=GI:1789712;db_xref=ASAP:ABE-0010852;db_xref=UniProtKB/Swiss-Prot:P0A7U3;db_xref=EcoGene:EG10918 EMBL gene 3450543 3451364 . - . ID=.7180;gene=rplB;locus_tag=b3317;gene_synonym=ECK3304;gene_synonym=JW3279;db_xref=EcoGene:EG10865 EMBL CDS 3450543 3451364 . - 0 ID=.7181;gene=rplB;locus_tag=b3317;gene_synonym=ECK3304;gene_synonym=JW3279;function=structural component%3B Ribosomal proteins - synthesis%2C modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0003735 - structural constituent of ribosome%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=50S ribosomal subunit protein L2;protein_id=AAC76342.1;db_xref=GI:1789713;db_xref=ASAP:ABE-0010854;db_xref=UniProtKB/Swiss-Prot:P60422;db_xref=EcoGene:EG10865 EMBL gene 3451382 3451684 . - . ID=.7182;gene=rplW;locus_tag=b3318;gene_synonym=ECK3305;gene_synonym=JW3280;db_xref=EcoGene:EG10883 EMBL CDS 3451382 3451684 . - 0 ID=.7183;gene=rplW;locus_tag=b3318;gene_synonym=ECK3305;gene_synonym=JW3280;function=structural component%3B Ribosomal proteins - synthesis%2C modification;experiment=N-terminus verified by Edman degradation: PMID 391594;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0003735 - structural constituent of ribosome%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=50S ribosomal subunit protein L23;protein_id=AAC76343.1;db_xref=GI:1789714;db_xref=ASAP:ABE-0010856;db_xref=UniProtKB/Swiss-Prot:P0ADZ0;db_xref=EcoGene:EG10883 EMBL gene 3451681 3452286 . - . ID=.7184;gene=rplD;locus_tag=b3319;gene_synonym=ECK3306;gene_synonym=eryA;gene_synonym=JW3281;db_xref=EcoGene:EG10867 EMBL CDS 3451681 3452286 . - 0 ID=.7185;gene=rplD;locus_tag=b3319;gene_synonym=ECK3306;gene_synonym=eryA;gene_synonym=JW3281;function=structural component%3B Ribosomal proteins - synthesis%2C modification;experiment=N-terminus verified by Edman degradation: PMID 9298646;note=50S ribosomal subunit protein L4%2C regulates expression of S10 operon%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0003735 - structural constituent of ribosome%3B GO_process: GO:0006412 - translation%3B GO_process: GO:0006355 - regulation of transcription%2C DNA-dependent%3B GO_process: GO:0009386 - translational attenuation;codon_start=1;transl_table=11;product=50S ribosomal subunit protein L4;protein_id=AAC76344.1;db_xref=GI:1789715;db_xref=ASAP:ABE-0010858;db_xref=UniProtKB/Swiss-Prot:P60723;db_xref=EcoGene:EG10867 EMBL gene 3452297 3452926 . - . ID=.7186;gene=rplC;locus_tag=b3320;gene_synonym=ECK3307;gene_synonym=JW3282;db_xref=EcoGene:EG10866 EMBL CDS 3452297 3452926 . - 0 ID=.7187;gene=rplC;locus_tag=b3320;gene_synonym=ECK3307;gene_synonym=JW3282;function=structural component%3B Ribosomal proteins - synthesis%2C modification;experiment=N-terminus verified by Edman degradation: PMID 365579%2C9298646%2C10739205;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0003735 - structural constituent of ribosome%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=50S ribosomal subunit protein L3;protein_id=AAC76345.1;db_xref=GI:1789716;db_xref=ASAP:ABE-0010860;db_xref=UniProtKB/Swiss-Prot:P60438;db_xref=EcoGene:EG10866 EMBL gene 3452959 3453270 . - . ID=.7188;gene=rpsJ;locus_tag=b3321;gene_synonym=ECK3308;gene_synonym=JW3283;gene_synonym=nusE;db_xref=EcoGene:EG10909 EMBL CDS 3452959 3453270 . - 0 ID=.7189;gene=rpsJ;locus_tag=b3321;gene_synonym=ECK3308;gene_synonym=JW3283;gene_synonym=nusE;function=structural component%3B Ribosomal proteins - synthesis%2C modification;experiment=N-terminus verified by Edman degradation: PMID 7007073%2C9298646;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0003735 - structural constituent of ribosome%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=30S ribosomal subunit protein S10;protein_id=AAC76346.1;db_xref=GI:1789717;db_xref=ASAP:ABE-0010862;db_xref=UniProtKB/Swiss-Prot:P0A7R5;db_xref=EcoGene:EG10909 EMBL gene 3453508 3453927 . - . ID=.7190;gene=gspB;locus_tag=b3322;gene_synonym=ECK3309;gene_synonym=JW3284;gene_synonym=pinO;gene_synonym=pioO;db_xref=EcoGene:EG11263 EMBL CDS 3453508 3453927 . - 0 ID=.7191;gene=gspB;locus_tag=b3322;gene_synonym=ECK3309;gene_synonym=JW3284;gene_synonym=pinO;gene_synonym=pioO;function=factor%3B DNA - replication%2C repair%2C restriction/modification;note=calcium-binding protein required for initiation of chromosome replication%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006261 - DNA-dependent DNA replication;codon_start=1;transl_table=11;product=part of gsp divergon involved in type II protein secretion;protein_id=AAC76347.1;db_xref=GI:1789719;db_xref=ASAP:ABE-0010865;db_xref=UniProtKB/Swiss-Prot:P03825;db_xref=EcoGene:EG11263 EMBL gene 3453929 3455398 . - . ID=.7192;gene=gspA;locus_tag=b3323;gene_synonym=ECK3310;gene_synonym=JW3285;gene_synonym=yheD;db_xref=EcoGene:EG12888 EMBL CDS 3453929 3455398 . - 0 ID=.7193;gene=gspA;locus_tag=b3323;gene_synonym=ECK3310;gene_synonym=JW3285;gene_synonym=yheD;function=putative transport%3B Not classified;note=putative export protein A for general secretion pathway (GSP);codon_start=1;transl_table=11;product=general secretory pathway component%2C cryptic;protein_id=AAC76348.1;db_xref=GI:1789720;db_xref=ASAP:ABE-0010867;db_xref=UniProtKB/Swiss-Prot:P45756;db_xref=EcoGene:EG12888 EMBL gene 3455578 3456393 . + . ID=.7194;gene=gspC;locus_tag=b3324;gene_synonym=ECK3311;gene_synonym=JW3286;gene_synonym=yheE;db_xref=EcoGene:EG12889 EMBL CDS 3455578 3456393 . + 0 ID=.7195;gene=gspC;locus_tag=b3324;gene_synonym=ECK3311;gene_synonym=JW3286;gene_synonym=yheE;function=putative transport%3B Not classified;codon_start=1;transl_table=11;product=general secretory pathway component%2C cryptic;protein_id=AAC76349.1;db_xref=GI:1789721;db_xref=ASAP:ABE-0010877;db_xref=UniProtKB/Swiss-Prot:P45757;db_xref=EcoGene:EG12889 EMBL gene 3456377 3458329 . + . ID=.7196;gene=gspD;locus_tag=b3325;gene_synonym=ECK3312;gene_synonym=JW5707;gene_synonym=yheF;db_xref=EcoGene:EG12890 EMBL CDS 3456377 3458329 . + 0 ID=.7197;gene=gspD;locus_tag=b3325;gene_synonym=ECK3312;gene_synonym=JW5707;gene_synonym=yheF;function=putative transport%3B Not classified;codon_start=1;transl_table=11;product=general secretory pathway component%2C cryptic;protein_id=AAC76350.2;db_xref=GI:87082242;db_xref=ASAP:ABE-0010879;db_xref=UniProtKB/Swiss-Prot:P45758;db_xref=EcoGene:EG12890 EMBL gene 3458339 3459820 . + . ID=.7198;gene=gspE;locus_tag=b3326;gene_synonym=ECK3313;gene_synonym=JW3288;gene_synonym=yheG;db_xref=EcoGene:EG12891 EMBL CDS 3458339 3459820 . + 0 ID=.7199;gene=gspE;locus_tag=b3326;gene_synonym=ECK3313;gene_synonym=JW3288;gene_synonym=yheG;function=putative transport%3B Not classified;codon_start=1;transl_table=11;product=general secretory pathway component%2C cryptic;protein_id=AAC76351.1;db_xref=GI:1789723;db_xref=ASAP:ABE-0010881;db_xref=UniProtKB/Swiss-Prot:P45759;db_xref=EcoGene:EG12891 EMBL gene 3459817 3461013 . + . ID=.7200;gene=gspF;locus_tag=b3327;gene_synonym=ECK3314;gene_synonym=hofF;gene_synonym=hopF;gene_synonym=JW3289;db_xref=EcoGene:EG12885 EMBL CDS 3459817 3461013 . + 0 ID=.7201;gene=gspF;locus_tag=b3327;gene_synonym=ECK3314;gene_synonym=hofF;gene_synonym=hopF;gene_synonym=JW3289;function=putative transport%3B Not classified;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=general secretory pathway component%2C cryptic;protein_id=AAC76352.1;db_xref=GI:1789724;db_xref=ASAP:ABE-0010883;db_xref=UniProtKB/Swiss-Prot:P41441;db_xref=EcoGene:EG12885 EMBL gene 3461023 3461460 . + . ID=.7202;gene=gspG;locus_tag=b3328;gene_synonym=ECK3315;gene_synonym=hofG;gene_synonym=hopG;gene_synonym=JW3290;db_xref=EcoGene:EG12886 EMBL CDS 3461023 3461460 . + 0 ID=.7203;gene=gspG;locus_tag=b3328;gene_synonym=ECK3315;gene_synonym=hofG;gene_synonym=hopG;gene_synonym=JW3290;function=putative transport%3B Not classified;codon_start=1;transl_table=11;product=pseudopilin%2C cryptic%2C general secretion pathway;protein_id=AAC76353.1;db_xref=GI:1789725;db_xref=ASAP:ABE-0010885;db_xref=UniProtKB/Swiss-Prot:P41442;db_xref=EcoGene:EG12886 EMBL gene 3461468 3461977 . + . ID=.7204;gene=gspH;locus_tag=b3329;gene_synonym=ECK3316;gene_synonym=hofH;gene_synonym=hopH;gene_synonym=JW3291;db_xref=EcoGene:EG12887 EMBL CDS 3461468 3461977 . + 0 ID=.7205;gene=gspH;locus_tag=b3329;gene_synonym=ECK3316;gene_synonym=hofH;gene_synonym=hopH;gene_synonym=JW3291;function=putative transport%3B Not classified;codon_start=1;transl_table=11;product=putative general secretory pathway component%2C cryptic;protein_id=AAC76354.1;db_xref=GI:1789726;db_xref=ASAP:ABE-0010888;db_xref=UniProtKB/Swiss-Prot:P41443;db_xref=EcoGene:EG12887 EMBL gene 3461974 3462351 . + . ID=.7206;gene=gspI;locus_tag=b3330;gene_synonym=ECK3317;gene_synonym=JW5706;gene_synonym=yheH;db_xref=EcoGene:EG12892 EMBL CDS 3461974 3462351 . + 0 ID=.7207;gene=gspI;locus_tag=b3330;gene_synonym=ECK3317;gene_synonym=JW5706;gene_synonym=yheH;function=putative transport%3B Not classified;codon_start=1;transl_table=11;product=general secretory pathway component%2C cryptic;protein_id=AAC76355.2;db_xref=GI:87082243;db_xref=ASAP:ABE-0010890;db_xref=UniProtKB/Swiss-Prot:P45760;db_xref=EcoGene:EG12892 EMBL gene 3462344 3462931 . + . ID=.7208;gene=gspJ;locus_tag=b3331;gene_synonym=ECK3318;gene_synonym=JW3293;gene_synonym=yheI;db_xref=EcoGene:EG12893 EMBL CDS 3462344 3462931 . + 0 ID=.7209;gene=gspJ;locus_tag=b3331;gene_synonym=ECK3318;gene_synonym=JW3293;gene_synonym=yheI;function=putative transport%3B Not classified;codon_start=1;transl_table=11;product=putative general secretory pathway component%2C cryptic;protein_id=AAC76356.1;db_xref=GI:1789728;db_xref=ASAP:ABE-0010892;db_xref=UniProtKB/Swiss-Prot:P45761;db_xref=EcoGene:EG12893 EMBL gene 3462924 3463907 . + . ID=.7210;gene=gspK;locus_tag=b3332;gene_synonym=ECK3319;gene_synonym=JW3294;gene_synonym=yheJ;db_xref=EcoGene:EG12894 EMBL CDS 3462924 3463907 . + 0 ID=.7211;gene=gspK;locus_tag=b3332;gene_synonym=ECK3319;gene_synonym=JW3294;gene_synonym=yheJ;function=putative transport%3B Not classified;codon_start=1;transl_table=11;product=general secretory pathway component%2C cryptic;protein_id=AAC76357.1;db_xref=GI:1789729;db_xref=ASAP:ABE-0010894;db_xref=UniProtKB/Swiss-Prot:P45762;db_xref=EcoGene:EG12894 EMBL gene 3463922 3465085 . + . ID=.7212;gene=gspL;locus_tag=b3333;gene_synonym=ECK3320;gene_synonym=JW5705;gene_synonym=yheK;db_xref=EcoGene:EG12895 EMBL CDS 3463922 3465085 . + 0 ID=.7213;gene=gspL;locus_tag=b3333;gene_synonym=ECK3320;gene_synonym=JW5705;gene_synonym=yheK;function=putative transport%3B Not classified;codon_start=1;transl_table=11;product=general secretory pathway component%2C cryptic;protein_id=AAC76358.2;db_xref=GI:87082244;db_xref=ASAP:ABE-0010896;db_xref=UniProtKB/Swiss-Prot:P45763;db_xref=EcoGene:EG12895 EMBL gene 3465082 3465543 . + . ID=.7214;gene=gspM;locus_tag=b3334;gene_synonym=ECK3321;gene_synonym=hopZ;gene_synonym=JW5704;gene_synonym=pshM;db_xref=EcoGene:EG12173 EMBL CDS 3465082 3465543 . + 0 ID=.7215;gene=gspM;locus_tag=b3334;gene_synonym=ECK3321;gene_synonym=hopZ;gene_synonym=JW5704;gene_synonym=pshM;function=putative transport%3B Not classified;codon_start=1;transl_table=11;product=general secretory pathway component%2C cryptic;protein_id=AAC76359.2;db_xref=GI:87082245;db_xref=ASAP:ABE-0010898;db_xref=UniProtKB/Swiss-Prot:P36678;db_xref=EcoGene:EG12173 EMBL gene 3465543 3466220 . + . ID=.7216;gene=gspO;locus_tag=b3335;gene_synonym=ECK3322;gene_synonym=hofD;gene_synonym=hopD;gene_synonym=hopO;gene_synonym=JW3297;gene_synonym=yheC;db_xref=EcoGene:EG11359 EMBL CDS 3465543 3466220 . + 0 ID=.7217;gene=gspO;locus_tag=b3335;gene_synonym=ECK3322;gene_synonym=hofD;gene_synonym=hopD;gene_synonym=hopO;gene_synonym=JW3297;gene_synonym=yheC;ec_number=2.1.1.-;ec_number=3.4.23.43;function=enzyme%3B Degradation of proteins%2C peptides%2C glyco;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=bifunctional prepilin leader peptidase/ methylase;protein_id=AAC76360.1;db_xref=GI:1789732;db_xref=ASAP:ABE-0010901;db_xref=UniProtKB/Swiss-Prot:P25960;db_xref=EcoGene:EG11359 EMBL gene 3466249 3466725 . - . ID=.7218;gene=bfr;locus_tag=b3336;gene_synonym=ECK3323;gene_synonym=JW3298;db_xref=EcoGene:EG10113 EMBL CDS 3466249 3466725 . - 0 ID=.7219;gene=bfr;locus_tag=b3336;gene_synonym=ECK3323;gene_synonym=JW3298;function=carrier%3B Transport of small molecules: Cations;experiment=N-terminus verified by Edman degradation: PMID 2644932;note=bacterioferrin%2C an iron storage homoprotein%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006826 - iron ion transport;codon_start=1;transl_table=11;product=bacterioferritin%2C iron storage and detoxification protein;protein_id=AAC76361.1;db_xref=GI:1789733;db_xref=ASAP:ABE-0010903;db_xref=UniProtKB/Swiss-Prot:P0ABD3;db_xref=EcoGene:EG10113 EMBL gene 3466797 3466991 . - . ID=.7220;gene=bfd;locus_tag=b3337;gene_synonym=ECK3324;gene_synonym=JW3299;gene_synonym=yheA;db_xref=EcoGene:EG11181 EMBL CDS 3466797 3466991 . - 0 ID=.7221;gene=bfd;locus_tag=b3337;gene_synonym=ECK3324;gene_synonym=JW3299;gene_synonym=yheA;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006826 - iron ion transport;codon_start=1;transl_table=11;product=bacterioferritin-associated ferredoxin;protein_id=AAC76362.1;db_xref=GI:1789735;db_xref=ASAP:ABE-0010906;db_xref=UniProtKB/Swiss-Prot:P0AE56;db_xref=EcoGene:EG11181 EMBL gene 3467160 3469853 . - . ID=.7222;gene=chiA;locus_tag=b3338;gene_synonym=ECK3325;gene_synonym=JW3300;gene_synonym=yheB;db_xref=EcoGene:EG11237 EMBL CDS 3467160 3469853 . - 0 ID=.7223;gene=chiA;locus_tag=b3338;gene_synonym=ECK3325;gene_synonym=JW3300;gene_synonym=yheB;ec_number=3.2.1.14;ec_number=3.2.1.17;function=putative enzyme%3B Not classified;note=GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0009057 - macromolecule catabolic process;codon_start=1;transl_table=11;product=periplasmic endochitinase;protein_id=AAC76363.1;db_xref=GI:1789736;db_xref=ASAP:ABE-0010909;db_xref=UniProtKB/Swiss-Prot:P13656;db_xref=EcoGene:EG11237 EMBL gene 3470145 3471329 . - . ID=.7224;gene=tufA;locus_tag=b3339;gene_synonym=ECK3326;gene_synonym=JW3301;gene_synonym=kirT;gene_synonym=pulT;db_xref=EcoGene:EG11036 EMBL CDS 3470145 3471329 . - 0 ID=.7225;gene=tufA;locus_tag=b3339;gene_synonym=ECK3326;gene_synonym=JW3301;gene_synonym=kirT;gene_synonym=pulT;function=factor%3B Proteins - translation and modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006412 - translation%3B GO_process: GO:0006970 - response to osmotic stress;codon_start=1;transl_table=11;product=translation elongation factor EF-Tu 1;protein_id=AAC76364.1;db_xref=GI:1789737;db_xref=ASAP:ABE-0010912;db_xref=UniProtKB/Swiss-Prot:P0CE47;db_xref=EcoGene:EG11036 EMBL gene 3471400 3473514 . - . ID=.7226;gene=fusA;locus_tag=b3340;gene_synonym=ECK3327;gene_synonym=far;gene_synonym=fus;gene_synonym=JW3302;db_xref=EcoGene:EG10360 EMBL CDS 3471400 3473514 . - 0 ID=.7227;gene=fusA;locus_tag=b3340;gene_synonym=ECK3327;gene_synonym=far;gene_synonym=fus;gene_synonym=JW3302;function=factor%3B Proteins - translation and modification;note=GTP-binding protein chain elongation factor EF-G%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=protein chain elongation factor EF-G%2C GTP-binding;protein_id=AAC76365.1;db_xref=GI:1789738;db_xref=ASAP:ABE-0010914;db_xref=UniProtKB/Swiss-Prot:P0A6M8;db_xref=EcoGene:EG10360 EMBL gene 3473542 3474081 . - . ID=.7228;gene=rpsG;locus_tag=b3341;gene_synonym=ECK3328;gene_synonym=JW3303;db_xref=EcoGene:EG10906 EMBL CDS 3473542 3474081 . - 0 ID=.7229;gene=rpsG;locus_tag=b3341;gene_synonym=ECK3328;gene_synonym=JW3303;function=structural component%3B Ribosomal proteins - synthesis%2C modification;note=30S ribosomal subunit protein S7%2C initiates assembly%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0003735 - structural constituent of ribosome%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=30S ribosomal subunit protein S7;protein_id=AAC76366.1;db_xref=GI:1789739;db_xref=ASAP:ABE-0010917;db_xref=UniProtKB/Swiss-Prot:P02359;db_xref=EcoGene:EG10906 EMBL gene 3474178 3474552 . - . ID=.7230;gene=rpsL;locus_tag=b3342;gene_synonym=asuB;gene_synonym=ECK3329;gene_synonym=JW3304;gene_synonym=strA;db_xref=EcoGene:EG10911 EMBL CDS 3474178 3474552 . - 0 ID=.7231;gene=rpsL;locus_tag=b3342;gene_synonym=asuB;gene_synonym=ECK3329;gene_synonym=JW3304;gene_synonym=strA;function=structural component%3B Ribosomal proteins - synthesis%2C modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0003735 - structural constituent of ribosome%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=30S ribosomal subunit protein S12;protein_id=AAC76367.1;db_xref=GI:1789740;db_xref=ASAP:ABE-0010919;db_xref=UniProtKB/Swiss-Prot:P0A7S3;db_xref=EcoGene:EG10911 EMBL gene 3474678 3474965 . - . ID=.7232;gene=tusB;locus_tag=b3343;gene_synonym=ECK3330;gene_synonym=JW3305;gene_synonym=yheL;db_xref=EcoGene:EG12896 EMBL CDS 3474678 3474965 . - 0 ID=.7233;gene=tusB;locus_tag=b3343;gene_synonym=ECK3330;gene_synonym=JW3305;gene_synonym=yheL;codon_start=1;transl_table=11;product=mnm(5)-s(2)U34-tRNA synthesis 2-thiolation protein;protein_id=AAC76368.1;db_xref=GI:1789741;db_xref=ASAP:ABE-0010922;db_xref=UniProtKB/Swiss-Prot:P45530;db_xref=EcoGene:EG12896 EMBL gene 3474973 3475332 . - . ID=.7234;gene=tusC;locus_tag=b3344;gene_synonym=ECK3331;gene_synonym=JW3306;gene_synonym=yheM;db_xref=EcoGene:EG12897 EMBL CDS 3474973 3475332 . - 0 ID=.7235;gene=tusC;locus_tag=b3344;gene_synonym=ECK3331;gene_synonym=JW3306;gene_synonym=yheM;codon_start=1;transl_table=11;product=mnm(5)-s(2)U34-tRNA synthesis 2-thiolation protein;protein_id=AAC76369.1;db_xref=GI:1789742;db_xref=ASAP:ABE-0010928;db_xref=UniProtKB/Swiss-Prot:P45531;db_xref=EcoGene:EG12897 EMBL gene 3475332 3475718 . - . ID=.7236;gene=tusD;locus_tag=b3345;gene_synonym=ECK3332;gene_synonym=JW3307;gene_synonym=yheN;db_xref=EcoGene:EG12898 EMBL CDS 3475332 3475718 . - 0 ID=.7237;gene=tusD;locus_tag=b3345;gene_synonym=ECK3332;gene_synonym=JW3307;gene_synonym=yheN;codon_start=1;transl_table=11;product=sulfurtransferase for 2-thiolation step of mnm(5)-s(2)U34-tRNA synthesis;protein_id=AAC76370.1;db_xref=GI:1789743;db_xref=ASAP:ABE-0010933;db_xref=UniProtKB/Swiss-Prot:P45532;db_xref=EcoGene:EG12898 EMBL gene 3475718 3476440 . - . ID=.7238;gene=yheO;locus_tag=b3346;gene_synonym=ECK3333;gene_synonym=JW5703;db_xref=EcoGene:EG12899 EMBL CDS 3475718 3476440 . - 0 ID=.7239;gene=yheO;locus_tag=b3346;gene_synonym=ECK3333;gene_synonym=JW5703;codon_start=1;transl_table=11;product=putative PAS domain-containing DNA-binding transcriptional regulator;protein_id=AAC76371.2;db_xref=GI:87082246;db_xref=ASAP:ABE-0010936;db_xref=UniProtKB/Swiss-Prot:P64624;db_xref=EcoGene:EG12899 EMBL gene 3476607 3477419 . - . ID=.7240;gene=fkpA;locus_tag=b3347;gene_synonym=ECK3334;gene_synonym=JW3309;gene_synonym=yzzS;db_xref=EcoGene:EG12900 EMBL CDS 3476607 3477419 . - 0 ID=.7241;gene=fkpA;locus_tag=b3347;gene_synonym=ECK3334;gene_synonym=JW3309;gene_synonym=yzzS;ec_number=5.2.1.8;function=enzyme%3B Proteins - translation and modification;note=GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase);protein_id=AAC76372.1;db_xref=GI:1789745;db_xref=ASAP:ABE-0010938;db_xref=UniProtKB/Swiss-Prot:P45523;db_xref=EcoGene:EG12900 EMBL gene 3477640 3477858 . + . ID=.7242;gene=slyX;locus_tag=b3348;gene_synonym=ECK3335;gene_synonym=JW3310;db_xref=EcoGene:EG11664 EMBL CDS 3477640 3477858 . + 0 ID=.7243;gene=slyX;locus_tag=b3348;gene_synonym=ECK3335;gene_synonym=JW3310;note=host factor for lysis of phiX174 infection;codon_start=1;transl_table=11;product=phi X174 lysis protein;protein_id=AAC76373.1;db_xref=GI:1789747;db_xref=ASAP:ABE-0010944;db_xref=UniProtKB/Swiss-Prot:P0A8R4;db_xref=EcoGene:EG11664 EMBL gene 3477907 3478497 . - . ID=.7244;gene=slyD;locus_tag=b3349;gene_synonym=ECK3336;gene_synonym=JW3311;db_xref=EcoGene:EG11663 EMBL CDS 3477907 3478497 . - 0 ID=.7245;gene=slyD;locus_tag=b3349;gene_synonym=ECK3336;gene_synonym=JW3311;ec_number=5.2.1.8;function=enzyme%3B Proteins - translation and modification;experiment=N-terminus verified by Edman degradation: PMID 8300624%2C9188461;note=FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase)%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=FKBP-type peptidyl prolyl cis-trans isomerase (rotamase);protein_id=AAC76374.1;db_xref=GI:1789748;db_xref=ASAP:ABE-0010946;db_xref=UniProtKB/Swiss-Prot:P0A9K9;db_xref=EcoGene:EG11663 EMBL gene 3478592 3478792 . - . ID=.7246;gene=yheV;locus_tag=b4551;gene_synonym=ECK3337;gene_synonym=JW3312;db_xref=EcoGene:EG14364 EMBL CDS 3478592 3478792 . - 0 ID=.7247;gene=yheV;locus_tag=b4551;gene_synonym=ECK3337;gene_synonym=JW3312;note=GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=DUF2387 family putative metal-binding protein;protein_id=ABD18701.1;db_xref=GI:87082247;db_xref=ASAP:ABE-0285072;db_xref=UniProtKB/Swiss-Prot:P0ADW8;db_xref=EcoGene:EG14364 EMBL gene 3478802 3480607 . - . ID=.7248;gene=kefB;locus_tag=b3350;gene_synonym=ECK3338;gene_synonym=JW3313;gene_synonym=trkB;db_xref=EcoGene:EG20110 EMBL CDS 3478802 3480607 . - 0 ID=.7249;gene=kefB;locus_tag=b3350;gene_synonym=ECK3338;gene_synonym=JW3313;gene_synonym=trkB;function=transport%3B Transport of small molecules: Cations;note=K+ efflux%3B NEM-activable K+/H+ antiporter%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_function: GO:0015386 - potassium:hydrogen antiporter activity;codon_start=1;transl_table=11;product=potassium:proton antiporter;protein_id=AAC76375.1;db_xref=GI:1789749;db_xref=ASAP:ABE-0010949;db_xref=UniProtKB/Swiss-Prot:P45522;db_xref=EcoGene:EG20110 EMBL gene 3480607 3481161 . - . ID=.7250;gene=kefG;locus_tag=b3351;gene_synonym=ECK3339;gene_synonym=JW3314;gene_synonym=yheR;db_xref=EcoGene:EG12902 EMBL CDS 3480607 3481161 . - 0 ID=.7251;gene=kefG;locus_tag=b3351;gene_synonym=ECK3339;gene_synonym=JW3314;gene_synonym=yheR;function=putative enzyme%3B Not classified;note=putative NAD(P)H oxidoreductase;codon_start=1;transl_table=11;product=potassium-efflux system ancillary protein for KefB%2C glutathione-regulated;protein_id=AAC76376.1;db_xref=GI:1789750;db_xref=ASAP:ABE-0010951;db_xref=UniProtKB/Swiss-Prot:P0A756;db_xref=EcoGene:EG12902 EMBL gene 3481289 3483202 . + . ID=.7252;gene=yheS;locus_tag=b3352;gene_synonym=ECK3340;gene_synonym=JW3315;db_xref=EcoGene:EG12903 EMBL CDS 3481289 3483202 . + 0 ID=.7253;gene=yheS;locus_tag=b3352;gene_synonym=ECK3340;gene_synonym=JW3315;function=putative transport%3B Not classified;note=putative ATP-binding component of a transport system%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=ABC-F family protein predicted regulatory ATPase;protein_id=AAC76377.1;db_xref=GI:1789751;db_xref=ASAP:ABE-0010955;db_xref=UniProtKB/Swiss-Prot:P63389;db_xref=EcoGene:EG12903 EMBL gene 3483202 3484224 . + . ID=.7254;gene=yheT;locus_tag=b3353;gene_synonym=ECK3341;gene_synonym=JW3316;db_xref=EcoGene:EG12904 EMBL CDS 3483202 3484224 . + 0 ID=.7255;gene=yheT;locus_tag=b3353;gene_synonym=ECK3341;gene_synonym=JW3316;codon_start=1;transl_table=11;product=UPF0017 family putative hydrolase;protein_id=AAC76378.1;db_xref=GI:1789752;db_xref=ASAP:ABE-0010957;db_xref=UniProtKB/Swiss-Prot:P45524;db_xref=EcoGene:EG12904 EMBL gene 3484218 3484436 . + . ID=.7256;gene=yheU;locus_tag=b3354;gene_synonym=ECK3342;gene_synonym=JW3317;db_xref=EcoGene:EG12905 EMBL CDS 3484218 3484436 . + 0 ID=.7257;gene=yheU;locus_tag=b3354;gene_synonym=ECK3342;gene_synonym=JW3317;codon_start=1;transl_table=11;product=UPF0270 family protein;protein_id=AAC76379.1;db_xref=GI:1789753;db_xref=ASAP:ABE-0010959;db_xref=UniProtKB/Swiss-Prot:P67624;db_xref=EcoGene:EG12905 EMBL gene 3484490 3485359 . + . ID=.7258;gene=prkB;locus_tag=b3355;gene_synonym=ECK3343;gene_synonym=JW3318;gene_synonym=prk?;gene_synonym=yhfF;db_xref=EcoGene:EG12365 EMBL CDS 3484490 3485359 . + 0 ID=.7259;gene=prkB;locus_tag=b3355;gene_synonym=ECK3343;gene_synonym=JW3318;gene_synonym=prk?;gene_synonym=yhfF;function=putative enzyme%3B Central intermediary metabolism: Miscellaneous glucose metabolism;note=probable phosphoribulokinase%3B GO_process: GO:0006006 - glucose metabolic process;codon_start=1;transl_table=11;product=putative phosphoribulokinase;protein_id=AAC76380.1;db_xref=GI:2367214;db_xref=ASAP:ABE-0010962;db_xref=UniProtKB/Swiss-Prot:P0AEX5;db_xref=EcoGene:EG12365 EMBL repeat_region 3485372 3485393 . + . ID=.7260;note=REP246 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 3485414 3485818 . - . ID=.7261;gene=yhfA;locus_tag=b3356;gene_synonym=ECK3344;gene_synonym=JW3319;db_xref=EcoGene:EG11182 EMBL CDS 3485414 3485818 . - 0 ID=.7262;gene=yhfA;locus_tag=b3356;gene_synonym=ECK3344;gene_synonym=JW3319;codon_start=1;transl_table=11;product=OsmC family protein;protein_id=AAC76381.1;db_xref=GI:1789755;db_xref=ASAP:ABE-0010964;db_xref=UniProtKB/Swiss-Prot:P0ADX1;db_xref=EcoGene:EG11182 EMBL gene 3486120 3486752 . + . ID=.7263;gene=crp;locus_tag=b3357;gene_synonym=cap;gene_synonym=csm;gene_synonym=ECK3345;gene_synonym=JW5702;db_xref=EcoGene:EG10164 EMBL CDS 3486120 3486752 . + 0 ID=.7264;gene=crp;locus_tag=b3357;gene_synonym=cap;gene_synonym=csm;gene_synonym=ECK3345;gene_synonym=JW5702;function=regulator%3B Global regulatory functions;note=cyclic AMP receptor protein%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=cAMP-activated global transcription factor%2C mediator of catabolite repression;protein_id=AAC76382.1;db_xref=GI:1789756;db_xref=ASAP:ABE-0010970;db_xref=UniProtKB/Swiss-Prot:P0ACJ8;db_xref=EcoGene:EG10164 EMBL gene 3486791 3488893 . + . ID=.7265;gene=yhfK;locus_tag=b3358;gene_synonym=ECK3346;gene_synonym=JW5701;db_xref=EcoGene:EG12906 EMBL CDS 3486791 3488893 . + 0 ID=.7266;gene=yhfK;locus_tag=b3358;gene_synonym=ECK3346;gene_synonym=JW5701;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0008152 - metabolic process;codon_start=1;transl_table=11;product=putative transporter%2C FUSC superfamily inner membrane protein;protein_id=AAC76383.2;db_xref=GI:87082248;db_xref=ASAP:ABE-0010974;db_xref=UniProtKB/Swiss-Prot:P45537;db_xref=EcoGene:EG12906 EMBL repeat_region 3488903 3488958 . + . ID=.7267;note=REP247 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 3488960 3490180 . - . ID=.7268;gene=argD;locus_tag=b3359;gene_synonym=alaB;gene_synonym=Arg1;gene_synonym=argG;gene_synonym=dapC;gene_synonym=dtu;gene_synonym=ECK3347;gene_synonym=JW3322;db_xref=EcoGene:EG10066 EMBL CDS 3488960 3490180 . - 0 ID=.7269;gene=argD;locus_tag=b3359;gene_synonym=alaB;gene_synonym=Arg1;gene_synonym=argG;gene_synonym=dapC;gene_synonym=dtu;gene_synonym=ECK3347;gene_synonym=JW3322;ec_number=2.6.1.11;ec_number=2.6.1.17;function=enzyme%3B Amino acid biosynthesis: Arginine;note=acetylornithine delta-aminotransferase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006526 - arginine biosynthetic process%3B GO_process: GO:0009089 - lysine biosynthetic process via diaminopimelate;codon_start=1;transl_table=11;product=bifunctional acetylornithine aminotransferase and succinyldiaminopimelate aminotransferase;protein_id=AAC76384.1;db_xref=GI:1789759;db_xref=ASAP:ABE-0010976;db_xref=UniProtKB/Swiss-Prot:P18335;db_xref=EcoGene:EG10066 EMBL gene 3490266 3490829 . - . ID=.7270;gene=pabA;locus_tag=b3360;gene_synonym=ECK3348;gene_synonym=JW3323;db_xref=EcoGene:EG10682 EMBL CDS 3490266 3490829 . - 0 ID=.7271;gene=pabA;locus_tag=b3360;gene_synonym=ECK3348;gene_synonym=JW3323;ec_number=2.6.1.85;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Folic acid;note=p-aminobenzoate synthetase%2C component II%3B GO_process: GO:0046656 - folic acid biosynthetic process;codon_start=1;transl_table=11;product=aminodeoxychorismate synthase%2C subunit II;protein_id=AAC76385.1;db_xref=GI:1789760;db_xref=ASAP:ABE-0010983;db_xref=UniProtKB/Swiss-Prot:P00903;db_xref=EcoGene:EG10682 EMBL gene 3490861 3491463 . - . ID=.7272;gene=fic;locus_tag=b3361;gene_synonym=ECK3349;gene_synonym=JW3324;gene_synonym=vhpT;db_xref=EcoGene:EG10307 EMBL CDS 3490861 3491463 . - 0 ID=.7273;gene=fic;locus_tag=b3361;gene_synonym=ECK3349;gene_synonym=JW3324;gene_synonym=vhpT;note=induced in stationary phase%2C recognized by rpoS%2C affects cell division;codon_start=1;transl_table=11;product=stationary phase-induced protein%2C putative toxin;protein_id=AAC76386.1;db_xref=GI:1789761;db_xref=ASAP:ABE-0010987;db_xref=UniProtKB/Swiss-Prot:P20605;db_xref=EcoGene:EG10307 EMBL gene 3491453 3491620 . - . ID=.7274;gene=yhfG;locus_tag=b3362;gene_synonym=ECK3350;gene_synonym=JW3325;gene_synonym=vhpA;db_xref=EcoGene:EG12374 EMBL CDS 3491453 3491620 . - 0 ID=.7275;gene=yhfG;locus_tag=b3362;gene_synonym=ECK3350;gene_synonym=JW3325;gene_synonym=vhpA;codon_start=1;transl_table=11;product=putative antitoxin for Fic;protein_id=AAC76387.1;db_xref=GI:1789762;db_xref=ASAP:ABE-0010989;db_xref=UniProtKB/Swiss-Prot:P0ADX5;db_xref=EcoGene:EG12374 EMBL gene 3491725 3492297 . - . ID=.7276;gene=ppiA;locus_tag=b3363;gene_synonym=ECK3351;gene_synonym=JW3326;gene_synonym=rot;gene_synonym=rotA;db_xref=EcoGene:EG10757 EMBL CDS 3491725 3492297 . - 0 ID=.7277;gene=ppiA;locus_tag=b3363;gene_synonym=ECK3351;gene_synonym=JW3326;gene_synonym=rot;gene_synonym=rotA;ec_number=5.2.1.8;function=enzyme%3B Proteins - translation and modification;note=GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=peptidyl-prolyl cis-trans isomerase A (rotamase A);protein_id=AAC76388.1;db_xref=GI:1789763;db_xref=ASAP:ABE-0010992;db_xref=UniProtKB/Swiss-Prot:P0AFL3;db_xref=EcoGene:EG10757 EMBL gene 3492568 3493749 . + . ID=.7278;gene=tsgA;locus_tag=b3364;gene_synonym=ECK3352;gene_synonym=gutS;gene_synonym=JW3327;gene_synonym=yhfC;gene_synonym=yhfH;db_xref=EcoGene:EG11262 EMBL CDS 3492568 3493749 . + 0 ID=.7279;gene=tsgA;locus_tag=b3364;gene_synonym=ECK3352;gene_synonym=gutS;gene_synonym=JW3327;gene_synonym=yhfC;gene_synonym=yhfH;function=putative transport%3B Not classified;note=putative transport%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative transporter;protein_id=AAC76389.1;db_xref=GI:1789764;db_xref=ASAP:ABE-0010997;db_xref=UniProtKB/Swiss-Prot:P60778;db_xref=EcoGene:EG11262 EMBL repeat_region 3493758 3493783 . + . ID=.7280;note=REP248 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 3494011 3496554 . + . ID=.7281;gene=nirB;locus_tag=b3365;gene_synonym=ECK3353;gene_synonym=JW3328;db_xref=EcoGene:EG10653 EMBL CDS 3494011 3496554 . + 0 ID=.7282;gene=nirB;locus_tag=b3365;gene_synonym=ECK3353;gene_synonym=JW3328;ec_number=1.7.1.4;function=enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;note=nitrite reductase (NAD(P)H) subunit%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=nitrite reductase%2C large subunit%2C NAD(P)H-binding;protein_id=AAC76390.1;db_xref=GI:1789765;db_xref=ASAP:ABE-0011003;db_xref=UniProtKB/Swiss-Prot:P08201;db_xref=EcoGene:EG10653 EMBL gene 3496551 3496877 . + . ID=.7283;gene=nirD;locus_tag=b3366;gene_synonym=ECK3354;gene_synonym=JW3329;db_xref=EcoGene:EG10655 EMBL CDS 3496551 3496877 . + 0 ID=.7284;gene=nirD;locus_tag=b3366;gene_synonym=ECK3354;gene_synonym=JW3329;ec_number=1.7.1.4;function=enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;note=nitrite reductase (NAD(P)H) subunit%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=nitrite reductase (NADH) small subunit;protein_id=AAC76391.1;db_xref=GI:1789766;db_xref=ASAP:ABE-0011005;db_xref=UniProtKB/Swiss-Prot:P0A9I8;db_xref=EcoGene:EG10655 EMBL gene 3497003 3497809 . + . ID=.7285;gene=nirC;locus_tag=b3367;gene_synonym=ECK3355;gene_synonym=JW3330;db_xref=EcoGene:EG10654 EMBL CDS 3497003 3497809 . + 0 ID=.7286;gene=nirC;locus_tag=b3367;gene_synonym=ECK3355;gene_synonym=JW3330;function=enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;note=nitrite reductase activity%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006807 - nitrogen compound metabolic process;codon_start=1;transl_table=11;product=nitrite transporter;protein_id=AAC76392.2;db_xref=GI:87082249;db_xref=ASAP:ABE-0011008;db_xref=UniProtKB/Swiss-Prot:P0AC26;db_xref=EcoGene:EG10654 EMBL gene 3497828 3499201 . + . ID=.7287;gene=cysG;locus_tag=b3368;gene_synonym=ECK3356;gene_synonym=JW3331;db_xref=EcoGene:EG10188 EMBL CDS 3497828 3499201 . + 0 ID=.7288;gene=cysG;locus_tag=b3368;gene_synonym=ECK3356;gene_synonym=JW3331;ec_number=1.3.1.76;ec_number=2.1.1.107;ec_number=4.99.1.4;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Heme%2C porphyrin;experiment=N-terminus verified by Edman degradation: PMID 2407558;note=uroporphyrinogen III methylase%3B sirohaeme biosynthesis;codon_start=1;transl_table=11;product=fused siroheme synthase 1%2C3-dimethyluroporphyriongen III dehydrogenase and siroheme ferrochelatase/uroporphyrinogen methyltransferase;protein_id=AAC76393.1;db_xref=GI:1789768;db_xref=ASAP:ABE-0011010;db_xref=UniProtKB/Swiss-Prot:P0AEA8;db_xref=EcoGene:EG10188 EMBL gene 3499448 3499615 . + . ID=.7289;gene=yhfL;locus_tag=b3369;gene_synonym=ECK3357;gene_synonym=JW3332;db_xref=EcoGene:EG12907 EMBL CDS 3499448 3499615 . + 0 ID=.7290;gene=yhfL;locus_tag=b3369;gene_synonym=ECK3357;gene_synonym=JW3332;codon_start=1;transl_table=11;product=small lipoprotein;protein_id=AAC76394.1;db_xref=GI:1789770;db_xref=ASAP:ABE-0011016;db_xref=UniProtKB/Swiss-Prot:P64627;db_xref=EcoGene:EG12907 EMBL gene 3499910 3501247 . + . ID=.7291;gene=frlA;locus_tag=b3370;gene_synonym=ECK3358;gene_synonym=JW3333;gene_synonym=yhfM;db_xref=EcoGene:EG12908 EMBL CDS 3499910 3501247 . + 0 ID=.7292;gene=frlA;locus_tag=b3370;gene_synonym=ECK3358;gene_synonym=JW3333;gene_synonym=yhfM;function=putative transport%3B Not classified;note=putative amino acid/amine transport protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative fructoselysine transporter;protein_id=AAC76395.2;db_xref=GI:87082250;db_xref=ASAP:ABE-0011019;db_xref=UniProtKB/Swiss-Prot:P45539;db_xref=EcoGene:EG12908 EMBL gene 3501268 3502290 . + . ID=.7293;gene=frlB;locus_tag=b3371;gene_synonym=ECK3359;gene_synonym=JW5700;gene_synonym=yhfN;db_xref=EcoGene:EG12909 EMBL CDS 3501268 3502290 . + 0 ID=.7294;gene=frlB;locus_tag=b3371;gene_synonym=ECK3359;gene_synonym=JW5700;gene_synonym=yhfN;function=putative transport%3B Not classified;note=putative transport protein;codon_start=1;transl_table=11;product=fructoselysine-6-P-deglycase;protein_id=AAC76396.2;db_xref=GI:87082251;db_xref=ASAP:ABE-0011021;db_xref=UniProtKB/Swiss-Prot:P0AC00;db_xref=EcoGene:EG12909 EMBL gene 3502340 3503170 . + . ID=.7295;gene=frlC;locus_tag=b4474;gene_synonym=ECK3360;gene_synonym=JW5699;gene_synonym=yhfO;gene_synonym=yhfP;db_xref=EcoGene:EG12910 EMBL CDS 3502340 3503170 . + 0 ID=.7296;gene=frlC;locus_tag=b4474;gene_synonym=ECK3360;gene_synonym=JW5699;gene_synonym=yhfO;gene_synonym=yhfP;note=putative fructoselysine or fructoselysine 6-P isomerase;codon_start=1;transl_table=11;product=fructoselysine 3-epimerase;protein_id=AAT48177.1;db_xref=GI:48994933;db_xref=ASAP:ABE-0174114;db_xref=UniProtKB/Swiss-Prot:P45541;db_xref=EcoGene:EG12910 EMBL gene 3503167 3503952 . + . ID=.7297;gene=frlD;locus_tag=b3374;gene_synonym=ECK3361;gene_synonym=JW3337;gene_synonym=yhfQ;db_xref=EcoGene:EG12912 EMBL CDS 3503167 3503952 . + 0 ID=.7298;gene=frlD;locus_tag=b3374;gene_synonym=ECK3361;gene_synonym=JW3337;gene_synonym=yhfQ;ec_number=2.7.1.-;function=putative enzyme%3B Not classified;note=putative kinase;codon_start=1;transl_table=11;product=fructoselysine 6-kinase;protein_id=AAC76399.1;db_xref=GI:1789775;db_xref=ASAP:ABE-0011029;db_xref=UniProtKB/Swiss-Prot:P45543;db_xref=EcoGene:EG12912 EMBL gene 3504052 3504783 . + . ID=.7299;gene=frlR;locus_tag=b3375;gene_synonym=ECK3362;gene_synonym=JW5698;gene_synonym=yhfR;db_xref=EcoGene:EG12913 EMBL CDS 3504052 3504783 . + 0 ID=.7300;gene=frlR;locus_tag=b3375;gene_synonym=ECK3362;gene_synonym=JW5698;gene_synonym=yhfR;function=putative regulator%3B Not classified;note=putative transcriptional regulator%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=putative DNA-binding transcriptional regulator;protein_id=AAC76400.2;db_xref=GI:87082252;db_xref=ASAP:ABE-0011031;db_xref=UniProtKB/Swiss-Prot:P45544;db_xref=EcoGene:EG12913 EMBL repeat_region 3504786 3504821 . + . ID=.7301;note=REP249 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 3504935 3506020 . - . ID=.7302;gene=yhfS;locus_tag=b3376;gene_synonym=ECK3363;gene_synonym=JW3339;db_xref=EcoGene:EG12914 EMBL CDS 3504935 3506020 . - 0 ID=.7303;gene=yhfS;locus_tag=b3376;gene_synonym=ECK3363;gene_synonym=JW3339;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=FNR-regulated pyridoxal phosphate-dependent aminotransferase family protein;protein_id=AAC76401.1;db_xref=GI:1789777;db_xref=ASAP:ABE-0011035;db_xref=UniProtKB/Swiss-Prot:P45545;db_xref=EcoGene:EG12914 EMBL gene 3506032 3507336 . - . ID=.7304;gene=yhfT;locus_tag=b3377;gene_synonym=ECK3364;gene_synonym=JW3340;db_xref=EcoGene:EG12915 EMBL CDS 3506032 3507336 . - 0 ID=.7305;gene=yhfT;locus_tag=b3377;gene_synonym=ECK3364;gene_synonym=JW3340;function=putative transport%3B Not classified;note=putative transport system permease protein;codon_start=1;transl_table=11;product=inner membrane protein;protein_id=AAC76402.1;db_xref=GI:2367218;db_xref=ASAP:ABE-0011037;db_xref=UniProtKB/Swiss-Prot:P45546;db_xref=EcoGene:EG12915 EMBL gene 3507348 3507701 . - . ID=.7306;gene=yhfU;locus_tag=b3378;gene_synonym=ECK3365;gene_synonym=JW5697;db_xref=EcoGene:EG12916 EMBL CDS 3507348 3507701 . - 0 ID=.7307;gene=yhfU;locus_tag=b3378;gene_synonym=ECK3365;gene_synonym=JW5697;codon_start=1;transl_table=11;product=DUF2620 family protein;protein_id=AAC76403.2;db_xref=GI:87082253;db_xref=ASAP:ABE-0011041;db_xref=UniProtKB/Swiss-Prot:P64631;db_xref=EcoGene:EG12916 EMBL gene 3507712 3508590 . - . ID=.7308;gene=php;locus_tag=b3379;gene_synonym=ECK3366;gene_synonym=JW3342;gene_synonym=yhfV;db_xref=EcoGene:EG12917 EMBL CDS 3507712 3508590 . - 0 ID=.7309;gene=php;locus_tag=b3379;gene_synonym=ECK3366;gene_synonym=JW3342;gene_synonym=yhfV;function=putative enzyme%3B Not classified;experiment=N-terminus verified by Edman degradation: PMID 9692977;note=putative hydrolase;codon_start=1;transl_table=11;product=phosphotriesterase homology protein;protein_id=AAC76404.1;db_xref=GI:1789780;db_xref=ASAP:ABE-0011044;db_xref=UniProtKB/Swiss-Prot:P45548;db_xref=EcoGene:EG12917 EMBL gene 3508587 3509813 . - . ID=.7310;gene=yhfW;locus_tag=b3380;gene_synonym=ECK3367;gene_synonym=JW3343;db_xref=EcoGene:EG12918 EMBL CDS 3508587 3509813 . - 0 ID=.7311;gene=yhfW;locus_tag=b3380;gene_synonym=ECK3367;gene_synonym=JW3343;function=putative enzyme%3B Not classified;note=putative mutase;codon_start=1;transl_table=11;product=phosphopentomutase-related metalloenzyme superfamily protein;protein_id=AAC76405.1;db_xref=GI:1789781;db_xref=ASAP:ABE-0011046;db_xref=UniProtKB/Swiss-Prot:P45549;db_xref=EcoGene:EG12918 EMBL gene 3509813 3510976 . - . ID=.7312;gene=yhfX;locus_tag=b3381;gene_synonym=ECK3368;gene_synonym=JW3344;db_xref=EcoGene:EG12919 EMBL CDS 3509813 3510976 . - 0 ID=.7313;gene=yhfX;locus_tag=b3381;gene_synonym=ECK3368;gene_synonym=JW3344;codon_start=1;transl_table=11;product=putative pyridoxal 5'-phosphate binding protein;protein_id=AAC76406.1;db_xref=GI:1789782;db_xref=ASAP:ABE-0011048;db_xref=UniProtKB/Swiss-Prot:P45550;db_xref=EcoGene:EG12919 EMBL gene 3511060 3511422 . - . ID=.7314;gene=yhfY;locus_tag=b3382;gene_synonym=ECK3369;gene_synonym=JW5696;db_xref=EcoGene:EG12920 EMBL CDS 3511060 3511422 . - 0 ID=.7315;gene=yhfY;locus_tag=b3382;gene_synonym=ECK3369;gene_synonym=JW5696;codon_start=1;transl_table=11;product=PRD domain protein;protein_id=AAC76407.2;db_xref=GI:87082254;db_xref=ASAP:ABE-0011050;db_xref=UniProtKB/Swiss-Prot:P45551;db_xref=EcoGene:EG12920 EMBL gene 3511439 3512344 . - . ID=.7316;gene=yhfZ;locus_tag=b3383;gene_synonym=ECK3370;gene_synonym=JW5948;db_xref=EcoGene:EG12921 EMBL CDS 3511439 3512344 . - 0 ID=.7317;gene=yhfZ;locus_tag=b3383;gene_synonym=ECK3370;gene_synonym=JW5948;codon_start=1;transl_table=11;product=putative DNA-binding transcriptional regulator;protein_id=AAT48178.1;db_xref=GI:48994934;db_xref=ASAP:ABE-0011052;db_xref=UniProtKB/Swiss-Prot:P45552;db_xref=EcoGene:EG12921 EMBL repeat_region 3512511 3512600 . + . ID=.7318;note=REP250 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 3512634 3513638 . - . ID=.7319;gene=trpS;locus_tag=b3384;gene_synonym=ECK3371;gene_synonym=JW3347;db_xref=EcoGene:EG11030 EMBL CDS 3512634 3513638 . - 0 ID=.7320;gene=trpS;locus_tag=b3384;gene_synonym=ECK3371;gene_synonym=JW3347;ec_number=6.1.1.2;function=enzyme%3B Aminoacyl tRNA synthetases%2C tRNA modification;note=tryptophan tRNA synthetase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006418 - tRNA aminoacylation for protein translation;codon_start=1;transl_table=11;product=tryptophanyl-tRNA synthetase;protein_id=AAC76409.1;db_xref=GI:1789786;db_xref=ASAP:ABE-0011056;db_xref=UniProtKB/Swiss-Prot:P00954;db_xref=EcoGene:EG11030 EMBL gene 3513631 3514389 . - . ID=.7321;gene=gph;locus_tag=b3385;gene_synonym=ECK3372;gene_synonym=JW3348;gene_synonym=yhfE;db_xref=EcoGene:EG11871 EMBL CDS 3513631 3514389 . - 0 ID=.7322;gene=gph;locus_tag=b3385;gene_synonym=ECK3372;gene_synonym=JW3348;gene_synonym=yhfE;ec_number=3.1.3.18;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=phosphoglycolate phosphatase;protein_id=AAC76410.1;db_xref=GI:1789787;db_xref=ASAP:ABE-0011058;db_xref=UniProtKB/Swiss-Prot:P32662;db_xref=EcoGene:EG11871 EMBL gene 3514382 3515059 . - . ID=.7323;gene=rpe;locus_tag=b3386;gene_synonym=dod;gene_synonym=ECK3373;gene_synonym=JW3349;gene_synonym=yhfD;db_xref=EcoGene:EG11960 EMBL CDS 3514382 3515059 . - 0 ID=.7324;gene=rpe;locus_tag=b3386;gene_synonym=dod;gene_synonym=ECK3373;gene_synonym=JW3349;gene_synonym=yhfD;ec_number=5.1.3.1;function=enzyme%3B Central intermediary metabolism: Non-oxidative branch%2C pentose pathway;note=GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0009052 - pentose-phosphate shunt%2C non-oxidative branch;codon_start=1;transl_table=11;product=D-ribulose-5-phosphate 3-epimerase;protein_id=AAC76411.1;db_xref=GI:1789788;db_xref=ASAP:ABE-0011061;db_xref=UniProtKB/Swiss-Prot:P0AG07;db_xref=EcoGene:EG11960 EMBL gene 3515077 3515913 . - . ID=.7325;gene=dam;locus_tag=b3387;gene_synonym=ECK3374;gene_synonym=JW3350;db_xref=EcoGene:EG10204 EMBL CDS 3515077 3515913 . - 0 ID=.7326;gene=dam;locus_tag=b3387;gene_synonym=ECK3374;gene_synonym=JW3350;ec_number=2.1.1.72;function=enzyme%3B DNA - replication%2C repair%2C restriction/modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006306 - DNA methylation;codon_start=1;transl_table=11;product=DNA adenine methyltransferase;protein_id=AAC76412.1;db_xref=GI:1789789;db_xref=ASAP:ABE-0011063;db_xref=UniProtKB/Swiss-Prot:P0AEE8;db_xref=EcoGene:EG10204 EMBL gene 3516020 3517306 . - . ID=.7327;gene=damX;locus_tag=b3388;gene_synonym=ECK3375;gene_synonym=JW3351;gene_synonym=yhfB;db_xref=EcoGene:EG11183 EMBL CDS 3516020 3517306 . - 0 ID=.7328;gene=damX;locus_tag=b3388;gene_synonym=ECK3375;gene_synonym=JW3351;gene_synonym=yhfB;function=putative membrane%3B Cell division;note=putative membrane protein%3B interferes with cell division%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=cell division protein that binds to the septal ring;protein_id=AAC76413.1;db_xref=GI:1789790;db_xref=ASAP:ABE-0011065;db_xref=UniProtKB/Swiss-Prot:P11557;db_xref=EcoGene:EG11183 EMBL gene 3517398 3518486 . - . ID=.7329;gene=aroB;locus_tag=b3389;gene_synonym=ECK3376;gene_synonym=JW3352;db_xref=EcoGene:EG10074 EMBL CDS 3517398 3518486 . - 0 ID=.7330;gene=aroB;locus_tag=b3389;gene_synonym=ECK3376;gene_synonym=JW3352;ec_number=4.2.3.4;function=enzyme%3B Amino acid biosynthesis: Chorismate;experiment=N-terminus verified by Edman degradation: PMID 3009224;note=GO_process: GO:0009423 - chorismate biosynthetic process;codon_start=1;transl_table=11;product=3-dehydroquinate synthase;protein_id=AAC76414.1;db_xref=GI:1789791;db_xref=ASAP:ABE-0011067;db_xref=UniProtKB/Swiss-Prot:P07639;db_xref=EcoGene:EG10074 EMBL gene 3518543 3519064 . - . ID=.7331;gene=aroK;locus_tag=b3390;gene_synonym=ECK3377;gene_synonym=JW5947;db_xref=EcoGene:EG10081 EMBL CDS 3518543 3519064 . - 0 ID=.7332;gene=aroK;locus_tag=b3390;gene_synonym=ECK3377;gene_synonym=JW5947;ec_number=2.7.1.71;function=enzyme%3B Amino acid biosynthesis: Chorismate;note=GO_process: GO:0009423 - chorismate biosynthetic process;codon_start=1;transl_table=11;product=shikimate kinase I;protein_id=AAC76415.2;db_xref=GI:87082255;db_xref=ASAP:ABE-0011069;db_xref=UniProtKB/Swiss-Prot:P0A6D7;db_xref=EcoGene:EG10081 EMBL gene 3519465 3520703 . - . ID=.7333;gene=hofQ;locus_tag=b3391;gene_synonym=ECK3378;gene_synonym=hopQ;gene_synonym=JW3354;db_xref=EcoGene:EG12113 EMBL CDS 3519465 3520703 . - 0 ID=.7334;gene=hofQ;locus_tag=b3391;gene_synonym=ECK3378;gene_synonym=hopQ;gene_synonym=JW3354;function=putative transport%3B Not classified;note=putative transport portein;codon_start=1;transl_table=11;product=DNA catabolic putative fimbrial transporter;protein_id=AAC76416.1;db_xref=GI:1789793;db_xref=ASAP:ABE-0011071;db_xref=UniProtKB/Swiss-Prot:P34749;db_xref=EcoGene:EG12113 EMBL gene 3520615 3521019 . - . ID=.7335;gene=hofP;locus_tag=b3392;gene_synonym=ECK3379;gene_synonym=JW5694;gene_synonym=yrfA;db_xref=EcoGene:EG12922 EMBL CDS 3520615 3521019 . - 0 ID=.7336;gene=hofP;locus_tag=b3392;gene_synonym=ECK3379;gene_synonym=JW5694;gene_synonym=yrfA;codon_start=1;transl_table=11;product=DNA catabolic protein;protein_id=AAC76417.2;db_xref=GI:87082256;db_xref=ASAP:ABE-0011073;db_xref=UniProtKB/Swiss-Prot:P45750;db_xref=EcoGene:EG12922 EMBL gene 3521009 3521449 . - . ID=.7337;gene=hofO;locus_tag=b3393;gene_synonym=ECK3380;gene_synonym=JW3356;gene_synonym=yrfB;db_xref=EcoGene:EG12923 EMBL CDS 3521009 3521449 . - 0 ID=.7338;gene=hofO;locus_tag=b3393;gene_synonym=ECK3380;gene_synonym=JW3356;gene_synonym=yrfB;codon_start=1;transl_table=11;product=DNA catabolic protein;protein_id=AAC76418.1;db_xref=GI:1789795;db_xref=ASAP:ABE-0011075;db_xref=UniProtKB/Swiss-Prot:P45751;db_xref=EcoGene:EG12923 EMBL gene 3521433 3521972 . - . ID=.7339;gene=hofN;locus_tag=b3394;gene_synonym=ECK3381;gene_synonym=JW3357;gene_synonym=yrfC;db_xref=EcoGene:EG12924 EMBL CDS 3521433 3521972 . - 0 ID=.7340;gene=hofN;locus_tag=b3394;gene_synonym=ECK3381;gene_synonym=JW3357;gene_synonym=yrfC;codon_start=1;transl_table=11;product=DNA catabolic putative fimbrial assembly protein;protein_id=AAC76419.1;db_xref=GI:1789796;db_xref=ASAP:ABE-0011077;db_xref=UniProtKB/Swiss-Prot:P64634;db_xref=EcoGene:EG12924 EMBL gene 3521972 3522751 . - . ID=.7341;gene=hofM;locus_tag=b3395;gene_synonym=ECK3382;gene_synonym=JW5693;gene_synonym=yrfD;db_xref=EcoGene:EG12925 EMBL CDS 3521972 3522751 . - 0 ID=.7342;gene=hofM;locus_tag=b3395;gene_synonym=ECK3382;gene_synonym=JW5693;gene_synonym=yrfD;codon_start=1;transl_table=11;product=DNA catabolic putative pilus assembly protein;protein_id=AAC76420.2;db_xref=GI:87082257;db_xref=ASAP:ABE-0011079;db_xref=UniProtKB/Swiss-Prot:P45753;db_xref=EcoGene:EG12925 EMBL gene 3522871 3525423 . + . ID=.7343;gene=mrcA;locus_tag=b3396;gene_synonym=ECK3383;gene_synonym=JW3359;gene_synonym=ponA;db_xref=EcoGene:EG10748 EMBL CDS 3522871 3525423 . + 0 ID=.7344;gene=mrcA;locus_tag=b3396;gene_synonym=ECK3383;gene_synonym=JW3359;gene_synonym=ponA;ec_number=2.4.2.-;ec_number=3.4.-.-;function=enzyme%3B Murein sacculus%2C peptidoglycan;note=peptidoglycan synthetase%3B penicillin-binding protein 1A%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009252 - peptidoglycan biosynthetic process%3B GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=penicillin-binding protein 1a%2C murein transglycosylase and transpeptidase;protein_id=AAC76421.2;db_xref=GI:87082258;db_xref=ASAP:ABE-0011082;db_xref=UniProtKB/Swiss-Prot:P02918;db_xref=EcoGene:EG10748 EMBL repeat_region 3525478 3525575 . + . ID=.7345;note=RIP251 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 3525589 3526149 . - . ID=.7346;gene=nudE;locus_tag=b3397;gene_synonym=ECK3384;gene_synonym=JW3360;gene_synonym=yrfE;db_xref=EcoGene:EG12926 EMBL CDS 3525589 3526149 . - 0 ID=.7347;gene=nudE;locus_tag=b3397;gene_synonym=ECK3384;gene_synonym=JW3360;gene_synonym=yrfE;ec_number=3.6.1.-;codon_start=1;transl_table=11;product=adenosine nucleotide hydrolase%3B Ap3A/Ap2A/ADP-ribose/NADH hydrolase;protein_id=AAC76422.1;db_xref=GI:1789800;db_xref=ASAP:ABE-0011086;db_xref=UniProtKB/Swiss-Prot:P45799;db_xref=EcoGene:EG12926 EMBL gene 3526469 3528604 . + . ID=.7348;gene=yrfF;locus_tag=b3398;gene_synonym=ECK3385;gene_synonym=igaA;gene_synonym=JW3361;gene_synonym=mucM;gene_synonym=umoB;db_xref=EcoGene:EG12927 EMBL CDS 3526469 3528604 . + 0 ID=.7349;gene=yrfF;locus_tag=b3398;gene_synonym=ECK3385;gene_synonym=igaA;gene_synonym=JW3361;gene_synonym=mucM;gene_synonym=umoB;function=putative factor%3B Not classified;note=putative dehydrogenase;codon_start=1;transl_table=11;product=putative RcsCDB-response attenuator%2C inner membrane protein;protein_id=AAC76423.1;db_xref=GI:1789801;db_xref=ASAP:ABE-0011090;db_xref=UniProtKB/Swiss-Prot:P45800;db_xref=EcoGene:EG12927 EMBL gene 3528669 3529337 . + . ID=.7350;gene=yrfG;locus_tag=b3399;gene_synonym=ECK3386;gene_synonym=JW5865;db_xref=EcoGene:EG12928 EMBL CDS 3528669 3529337 . + 0 ID=.7351;gene=yrfG;locus_tag=b3399;gene_synonym=ECK3386;gene_synonym=JW5865;function=putative enzyme%3B Not classified;note=putative phosphatase;codon_start=1;transl_table=11;product=GMP/IMP nucleotidase;protein_id=AAC76424.2;db_xref=GI:87082259;db_xref=ASAP:ABE-0011092;db_xref=UniProtKB/Swiss-Prot:P64636;db_xref=EcoGene:EG12928 EMBL gene 3529348 3529749 . + . ID=.7352;gene=hslR;locus_tag=b3400;gene_synonym=ECK3387;gene_synonym=JW3363;gene_synonym=yrfH;db_xref=EcoGene:EG12929 EMBL CDS 3529348 3529749 . + 0 ID=.7353;gene=hslR;locus_tag=b3400;gene_synonym=ECK3387;gene_synonym=JW3363;gene_synonym=yrfH;experiment=N-terminus verified by Edman degradation: PMID 9867837;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009266 - response to temperature stimulus;codon_start=1;transl_table=11;product=ribosome-associated heat shock protein Hsp15;protein_id=AAC76425.1;db_xref=GI:1789803;db_xref=ASAP:ABE-0011094;db_xref=UniProtKB/Swiss-Prot:P0ACG8;db_xref=EcoGene:EG12929 EMBL gene 3529774 3530652 . + . ID=.7354;gene=hslO;locus_tag=b3401;gene_synonym=ECK3388;gene_synonym=JW5692;gene_synonym=yrfI;db_xref=EcoGene:EG12930 EMBL CDS 3529774 3530652 . + 0 ID=.7355;gene=hslO;locus_tag=b3401;gene_synonym=ECK3388;gene_synonym=JW5692;gene_synonym=yrfI;note=GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=heat shock protein Hsp33;protein_id=AAC76426.2;db_xref=GI:87082260;db_xref=ASAP:ABE-0011096;db_xref=UniProtKB/Swiss-Prot:P0A6Y5;db_xref=EcoGene:EG12930 EMBL gene 3530715 3532439 . - . ID=.7356;gene=yhgE;locus_tag=b3402;gene_synonym=ECK3389;gene_synonym=JW3365;db_xref=EcoGene:EG12931 EMBL CDS 3530715 3532439 . - 0 ID=.7357;gene=yhgE;locus_tag=b3402;gene_synonym=ECK3389;gene_synonym=JW3365;function=putative transport%3B Not classified;note=putative transport%3B GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=DUF4153 family putative inner membrane protein;protein_id=AAC76427.1;db_xref=GI:1789805;db_xref=ASAP:ABE-0011098;db_xref=UniProtKB/Swiss-Prot:P45804;db_xref=EcoGene:EG12931 EMBL gene 3532818 3534440 . + . ID=.7358;gene=pck;locus_tag=b3403;gene_synonym=ECK3390;gene_synonym=JW3366;gene_synonym=pckA;db_xref=EcoGene:EG10688 EMBL CDS 3532818 3534440 . + 0 ID=.7359;gene=pck;locus_tag=b3403;gene_synonym=ECK3390;gene_synonym=JW3366;gene_synonym=pckA;ec_number=4.1.1.49;function=enzyme%3B Central intermediary metabolism: Gluconeogenesis;experiment=N-terminus verified by Edman degradation: PMID 1701430%2C9298646;note=GO_process: GO:0006094 - gluconeogenesis;codon_start=1;transl_table=11;product=phosphoenolpyruvate carboxykinase [ATP];protein_id=AAC76428.1;db_xref=GI:1789807;db_xref=ASAP:ABE-0011106;db_xref=UniProtKB/Swiss-Prot:P22259;db_xref=EcoGene:EG10688 EMBL gene 3534516 3535868 . - . ID=.7360;gene=envZ;locus_tag=b3404;gene_synonym=cpr;gene_synonym=ECK3391;gene_synonym=JW3367;gene_synonym=ompB;gene_synonym=perA;gene_synonym=tpo;db_xref=EcoGene:EG10269 EMBL CDS 3534516 3535868 . - 0 ID=.7361;gene=envZ;locus_tag=b3404;gene_synonym=cpr;gene_synonym=ECK3391;gene_synonym=JW3367;gene_synonym=ompB;gene_synonym=perA;gene_synonym=tpo;function=enzyme%3B Global regulatory functions;note=protein histidine kinase/phosphatase sensor for OmpR%2C modulates expression of ompF and ompC%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=sensory histidine kinase in two-component regulatory system with OmpR;protein_id=AAC76429.1;db_xref=GI:1789808;db_xref=ASAP:ABE-0011108;db_xref=UniProtKB/Swiss-Prot:P0AEJ4;db_xref=EcoGene:EG10269 EMBL gene 3535865 3536584 . - . ID=.7362;gene=ompR;locus_tag=b3405;gene_synonym=ECK3392;gene_synonym=JW3368;gene_synonym=kmt;gene_synonym=ompB;db_xref=EcoGene:EG10672 EMBL CDS 3535865 3536584 . - 0 ID=.7363;gene=ompR;locus_tag=b3405;gene_synonym=ECK3392;gene_synonym=JW3368;gene_synonym=kmt;gene_synonym=ompB;function=regulator%3B Global regulatory functions;note=response regulator (sensor%2C EnvZ) affecting transcription of ompC and ompF: outer membrane protein synthesis%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=response regulator in two-component regulatory system with EnvZ;protein_id=AAC76430.1;db_xref=GI:1789809;db_xref=ASAP:ABE-0011110;db_xref=UniProtKB/Swiss-Prot:P0AA16;db_xref=EcoGene:EG10672 EMBL gene 3536812 3537288 . + . ID=.7364;gene=greB;locus_tag=b3406;gene_synonym=ECK3393;gene_synonym=JW3369;db_xref=EcoGene:EG11578 EMBL CDS 3536812 3537288 . + 0 ID=.7365;gene=greB;locus_tag=b3406;gene_synonym=ECK3393;gene_synonym=JW3369;function=regulator%3B RNA synthesis%2C modification%2C DNA transcription;experiment=N-terminus verified by Edman degradation: PMID 8431948;note=transcription elongation factor and transcript cleavage%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006350 - transcription%3B GO_process: GO:0006355 - regulation of transcription%2C DNA-dependent;codon_start=1;transl_table=11;product=transcript cleavage factor;protein_id=AAC76431.2;db_xref=GI:87082261;db_xref=ASAP:ABE-0011117;db_xref=UniProtKB/Swiss-Prot:P30128;db_xref=EcoGene:EG11578 EMBL gene 3537385 3539706 . + . ID=.7366;gene=yhgF;locus_tag=b3407;gene_synonym=ECK3394;gene_synonym=JW3370;gene_synonym=tex;db_xref=EcoGene:EG12932 EMBL CDS 3537385 3539706 . + 0 ID=.7367;gene=yhgF;locus_tag=b3407;gene_synonym=ECK3394;gene_synonym=JW3370;gene_synonym=tex;codon_start=1;transl_table=11;product=putative transcriptional accessory protein;protein_id=AAC76432.2;db_xref=GI:87082262;db_xref=ASAP:ABE-0011120;db_xref=UniProtKB/Swiss-Prot:P46837;db_xref=EcoGene:EG12932 EMBL repeat_region 3539746 3539779 . + . ID=.7368;note=REP252 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 3540163 3540390 . + . ID=.7369;gene=feoA;locus_tag=b3408;gene_synonym=ECK3395;gene_synonym=JW3371;db_xref=EcoGene:EG12101 EMBL CDS 3540163 3540390 . + 0 ID=.7370;gene=feoA;locus_tag=b3408;gene_synonym=ECK3395;gene_synonym=JW3371;function=transport%3B Transport of small molecules: Cations;note=ferrous iron transport protein A%3B GO_process: GO:0006826 - iron ion transport;codon_start=1;transl_table=11;product=ferrous iron transporter%2C protein A;protein_id=AAC76433.1;db_xref=GI:1789812;db_xref=ASAP:ABE-0011124;db_xref=UniProtKB/Swiss-Prot:P0AEL3;db_xref=EcoGene:EG12101 EMBL gene 3540407 3542728 . + . ID=.7371;gene=feoB;locus_tag=b3409;gene_synonym=ECK3396;gene_synonym=JW3372;db_xref=EcoGene:EG12102 EMBL CDS 3540407 3542728 . + 0 ID=.7372;gene=feoB;locus_tag=b3409;gene_synonym=ECK3396;gene_synonym=JW3372;function=transport%3B Transport of small molecules: Cations;note=ferrous iron transport protein B%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006826 - iron ion transport;codon_start=1;transl_table=11;product=ferrous iron transporter protein B and GTP-binding protein%3B membrane protein;protein_id=AAC76434.1;db_xref=GI:1789813;db_xref=ASAP:ABE-0011126;db_xref=UniProtKB/Swiss-Prot:P33650;db_xref=EcoGene:EG12102 EMBL gene 3542728 3542964 . + . ID=.7373;gene=feoC;locus_tag=b3410;gene_synonym=ECK3397;gene_synonym=JW3373;gene_synonym=yhgG;db_xref=EcoGene:EG12933 EMBL CDS 3542728 3542964 . + 0 ID=.7374;gene=feoC;locus_tag=b3410;gene_synonym=ECK3397;gene_synonym=JW3373;gene_synonym=yhgG;note=GO_process: GO:0006355 - regulation of transcription%2C DNA-dependent;codon_start=1;transl_table=11;product=putative DNA-binding transcriptional regulator;protein_id=AAC76435.1;db_xref=GI:1789814;db_xref=ASAP:ABE-0011130;db_xref=UniProtKB/Swiss-Prot:P64638;db_xref=EcoGene:EG12933 EMBL gene 3543167 3544045 . + . ID=.7375;gene=yhgA;locus_tag=b3411;gene_synonym=ECK3398;gene_synonym=JW3374;db_xref=EcoGene:EG11750 EMBL CDS 3543167 3544045 . + 0 ID=.7376;gene=yhgA;locus_tag=b3411;gene_synonym=ECK3398;gene_synonym=JW3374;codon_start=1;transl_table=11;product=transposase_31 family protein;protein_id=AAC76436.1;db_xref=GI:1789816;db_xref=ASAP:ABE-0011134;db_xref=UniProtKB/Swiss-Prot:P31667;db_xref=EcoGene:EG11750 EMBL gene 3544074 3544844 . - . ID=.7377;gene=bioH;locus_tag=b3412;gene_synonym=bioB;gene_synonym=ECK3399;gene_synonym=JW3375;db_xref=EcoGene:EG10122 EMBL CDS 3544074 3544844 . - 0 ID=.7378;gene=bioH;locus_tag=b3412;gene_synonym=bioB;gene_synonym=ECK3399;gene_synonym=JW3375;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Biotin;note=biotin biosynthesis%3B reaction prior to pimeloyl CoA%3B GO_process: GO:0009102 - biotin biosynthetic process;codon_start=1;transl_table=11;product=pimeloyl-ACP methyl ester carboxylesterase;protein_id=AAC76437.1;db_xref=GI:1789817;db_xref=ASAP:ABE-0011136;db_xref=UniProtKB/Swiss-Prot:P13001;db_xref=EcoGene:EG10122 EMBL gene 3544882 3545565 . + . ID=.7379;gene=gntX;locus_tag=b3413;gene_synonym=ECK3400;gene_synonym=JW5691;gene_synonym=yhgH;db_xref=EcoGene:EG12934 EMBL CDS 3544882 3545565 . + 0 ID=.7380;gene=gntX;locus_tag=b3413;gene_synonym=ECK3400;gene_synonym=JW5691;gene_synonym=yhgH;codon_start=1;transl_table=11;product=DNA catabolic protein;protein_id=AAC76438.2;db_xref=GI:87082263;db_xref=ASAP:ABE-0011139;db_xref=UniProtKB/Swiss-Prot:P46846;db_xref=EcoGene:EG12934 EMBL gene 3545624 3546199 . + . ID=.7381;gene=nfuA;locus_tag=b3414;gene_synonym=ECK3401;gene_synonym=gntY;gene_synonym=JW3377;gene_synonym=yhgI;db_xref=EcoGene:EG12935 EMBL CDS 3545624 3546199 . + 0 ID=.7382;gene=nfuA;locus_tag=b3414;gene_synonym=ECK3401;gene_synonym=gntY;gene_synonym=JW3377;gene_synonym=yhgI;codon_start=1;transl_table=11;product=Fe/S biogenesis protein%2C putative scaffold/chaperone protein;protein_id=AAC76439.1;db_xref=GI:1789819;db_xref=ASAP:ABE-0011144;db_xref=UniProtKB/Swiss-Prot:P63020;db_xref=EcoGene:EG12935 EMBL repeat_region 3546222 3546257 . + . ID=.7383;note=REP253 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 3546559 3547875 . + . ID=.7384;gene=gntT;locus_tag=b3415;gene_synonym=ECK3402;gene_synonym=gntM;gene_synonym=gntTalpha;gene_synonym=JW5690;gene_synonym=usgA;gene_synonym=yhgC;db_xref=EcoGene:EG12380 EMBL CDS 3546559 3547875 . + 0 ID=.7385;gene=gntT;locus_tag=b3415;gene_synonym=ECK3402;gene_synonym=gntM;gene_synonym=gntTalpha;gene_synonym=JW5690;gene_synonym=usgA;gene_synonym=yhgC;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=high-affinity transport of gluconate / gluconate permease%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=gluconate transporter%2C high-affinity GNT I system;protein_id=AAT48179.1;db_xref=GI:48994935;db_xref=ASAP:ABE-0011148;db_xref=UniProtKB/Swiss-Prot:P39835;db_xref=EcoGene:EG12380 EMBL repeat_region 3547887 3547973 . + . ID=.7386;note=REP254 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 3547986 3550070 . - . ID=.7387;gene=malQ;locus_tag=b3416;gene_synonym=ECK3403;gene_synonym=JW3379;gene_synonym=malA;db_xref=EcoGene:EG10561 EMBL CDS 3547986 3550070 . - 0 ID=.7388;gene=malQ;locus_tag=b3416;gene_synonym=ECK3403;gene_synonym=JW3379;gene_synonym=malA;ec_number=2.4.1.25;function=enzyme%3B Degradation of polysaccharides;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0000272 - polysaccharide catabolic process;codon_start=1;transl_table=11;product=4-alpha-glucanotransferase (amylomaltase);protein_id=AAC76441.1;db_xref=GI:1789821;db_xref=ASAP:ABE-0011151;db_xref=UniProtKB/Swiss-Prot:P15977;db_xref=EcoGene:EG10561 EMBL gene 3550080 3552473 . - . ID=.7389;gene=malP;locus_tag=b3417;gene_synonym=blu;gene_synonym=ECK3404;gene_synonym=JW5689;gene_synonym=malA;db_xref=EcoGene:EG10560 EMBL CDS 3550080 3552473 . - 0 ID=.7390;gene=malP;locus_tag=b3417;gene_synonym=blu;gene_synonym=ECK3404;gene_synonym=JW5689;gene_synonym=malA;ec_number=2.4.1.1;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0000272 - polysaccharide catabolic process;codon_start=1;transl_table=11;product=maltodextrin phosphorylase;protein_id=AAT48180.1;db_xref=GI:48994936;db_xref=ASAP:ABE-0011154;db_xref=UniProtKB/Swiss-Prot:P00490;db_xref=EcoGene:EG10560 EMBL gene 3553085 3555790 . + . ID=.7391;gene=malT;locus_tag=b3418;gene_synonym=ECK3405;gene_synonym=JW3381;gene_synonym=malA;db_xref=EcoGene:EG10562 EMBL CDS 3553085 3555790 . + 0 ID=.7392;gene=malT;locus_tag=b3418;gene_synonym=ECK3405;gene_synonym=JW3381;gene_synonym=malA;function=regulator%3B Degradation of small molecules: Carbon compounds;note=positive regulator of mal regulon%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=mal regulon transcriptional activator;protein_id=AAC76443.1;db_xref=GI:2367223;db_xref=ASAP:ABE-0011162;db_xref=UniProtKB/Swiss-Prot:P06993;db_xref=EcoGene:EG10562 EMBL repeat_region 3555796 3555819 . + . ID=.7393;note=REP255 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 3555833 3556849 . - . ID=.7394;gene=rtcA;locus_tag=b4475;gene_synonym=ECK3406;gene_synonym=JW5688;gene_synonym=yhgJ;gene_synonym=yhgK;db_xref=EcoGene:EG12938 EMBL CDS 3555833 3556849 . - 0 ID=.7395;gene=rtcA;locus_tag=b4475;gene_synonym=ECK3406;gene_synonym=JW5688;gene_synonym=yhgJ;gene_synonym=yhgK;ec_number=6.5.1.4;function=enzyme%3B RNA synthesis%2C modification%2C DNA transcription;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0016070 - RNA metabolic process;codon_start=1;transl_table=11;product=RNA 3'-terminal phosphate cyclase;protein_id=AAT48181.1;db_xref=GI:48994937;db_xref=ASAP:ABE-0174104;db_xref=UniProtKB/Swiss-Prot:P46849;db_xref=EcoGene:EG12938 EMBL gene 3556853 3558079 . - . ID=.7396;gene=rtcB;locus_tag=b3421;gene_synonym=ECK3407;gene_synonym=JW3384;gene_synonym=yhgL;db_xref=EcoGene:EG12939 EMBL CDS 3556853 3558079 . - 0 ID=.7397;gene=rtcB;locus_tag=b3421;gene_synonym=ECK3407;gene_synonym=JW3384;gene_synonym=yhgL;codon_start=1;transl_table=11;product=RNA-splicing ligase;protein_id=AAC76446.1;db_xref=GI:2367224;db_xref=ASAP:ABE-0011170;db_xref=UniProtKB/Swiss-Prot:P46850;db_xref=EcoGene:EG12939 EMBL gene 3558268 3559866 . + . ID=.7398;gene=rtcR;locus_tag=b3422;gene_synonym=ECK3408;gene_synonym=JW3385;gene_synonym=yhgB;db_xref=EcoGene:EG12356 EMBL CDS 3558268 3559866 . + 0 ID=.7399;gene=rtcR;locus_tag=b3422;gene_synonym=ECK3408;gene_synonym=JW3385;gene_synonym=yhgB;function=putative regulator%3B Not classified;note=sigma54-dependent regulator of rtcBA expression%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006350 - transcription%3B GO_process: GO:0006355 - regulation of transcription%2C DNA-dependent;codon_start=1;transl_table=11;product=sigma 54-dependent transcriptional regulator of rtcBA expression;protein_id=AAC76447.1;db_xref=GI:1789828;db_xref=ASAP:ABE-0011174;db_xref=UniProtKB/Swiss-Prot:P38035;db_xref=EcoGene:EG12356 EMBL gene 3559848 3560605 . - . ID=.7400;gene=glpR;locus_tag=b3423;gene_synonym=ECK3409;gene_synonym=JW3386;pseudo=true;db_xref=EcoGene:EG10400 EMBL biological_region 3559848 3560605 . - 0 ID=.7401;featflags=type:CDS;gene=glpR;locus_tag=b3423;gene_synonym=ECK3409;gene_synonym=JW3386;experiment=N-terminus verified by Edman degradation: PMID 8955387;note=pseudogene%2C DNA-binding transcriptional repressor%3Bregulator%3B Energy metabolism%2C carbon: Anaerobic respiration%3B repressor of the glp operon%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0006350 - transcription;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0011176;db_xref=UniProtKB/Swiss-Prot:P0ACL0;db_xref=EcoGene:EG10400 EMBL CDS 3559848 3560453 . - 0 Parent=.7401 EMBL CDS 3560456 3560605 . - 0 Parent=.7401 EMBL gene 3560622 3561452 . - . ID=.7404;gene=glpG;locus_tag=b3424;gene_synonym=ECK3410;gene_synonym=JW5687;db_xref=EcoGene:EG10397 EMBL CDS 3560622 3561452 . - 0 ID=.7405;gene=glpG;locus_tag=b3424;gene_synonym=ECK3410;gene_synonym=JW5687;function=phenotype%3B Energy metabolism%2C carbon: Anaerobic respiration;experiment=N-terminus verified by Edman degradation: PMID 8955387;note=protein of glp regulon;codon_start=1;transl_table=11;product=rhomboid intramembrane serine protease;protein_id=AAT48182.1;db_xref=GI:48994938;db_xref=ASAP:ABE-0011179;db_xref=UniProtKB/Swiss-Prot:P09391;db_xref=EcoGene:EG10397 EMBL gene 3561497 3561823 . - . ID=.7406;gene=glpE;locus_tag=b3425;gene_synonym=ECK3411;gene_synonym=JW3388;db_xref=EcoGene:EG10395 EMBL CDS 3561497 3561823 . - 0 ID=.7407;gene=glpE;locus_tag=b3425;gene_synonym=ECK3411;gene_synonym=JW3388;ec_number=2.8.1.1;function=phenotype%3B Energy metabolism%2C carbon: Anaerobic respiration;note=rhodanese (thiosulfate:cyanide sulfertransferase)%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=thiosulfate:cyanide sulfurtransferase (rhodanese);protein_id=AAC76450.1;db_xref=GI:1789831;db_xref=ASAP:ABE-0011182;db_xref=UniProtKB/Swiss-Prot:P0A6V5;db_xref=EcoGene:EG10395 EMBL gene 3562013 3563518 . + . ID=.7408;gene=glpD;locus_tag=b3426;gene_synonym=ECK3412;gene_synonym=glyD;gene_synonym=JW3389;db_xref=EcoGene:EG10394 EMBL CDS 3562013 3563518 . + 0 ID=.7409;gene=glpD;locus_tag=b3426;gene_synonym=ECK3412;gene_synonym=glyD;gene_synonym=JW3389;ec_number=1.1.5.3;function=enzyme%3B Energy metabolism%2C carbon: Aerobic respiration;experiment=N-terminus verified by Edman degradation: PMID 8982270;note=sn-glycerol-3-phosphate dehydrogenase (aerobic)%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009060 - aerobic respiration%3B GO_process: GO:0006071 - glycerol metabolic process;codon_start=1;transl_table=11;product=sn-glycerol-3-phosphate dehydrogenase%2C aerobic%2C FAD/NAD(P)-binding;protein_id=AAC76451.1;db_xref=GI:2367226;db_xref=ASAP:ABE-0011191;db_xref=UniProtKB/Swiss-Prot:P13035;db_xref=EcoGene:EG10394 EMBL repeat_region 3563582 3563679 . + . ID=.7410;note=RIP256 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 3563787 3564005 . - . ID=.7411;gene=yzgL;locus_tag=b3427;gene_synonym=ECK3413;gene_synonym=JW3390;pseudo=true;db_xref=EcoGene:EG14434 EMBL CDS 3563787 3564005 . - 0 ID=.7412;gene=yzgL;locus_tag=b3427;gene_synonym=ECK3413;gene_synonym=JW3390;note=pseudogene%2C periplasmic solute binding protein homology;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0011194;db_xref=UniProtKB/Swiss-Prot:P76692;db_xref=EcoGene:EG14434 EMBL gene 3564134 3566581 . - . ID=.7413;gene=glgP;locus_tag=b3428;gene_synonym=ECK3414;gene_synonym=glgY;gene_synonym=JW3391;db_xref=EcoGene:EG10380 EMBL CDS 3564134 3566581 . - 0 ID=.7414;gene=glgP;locus_tag=b3428;gene_synonym=ECK3414;gene_synonym=glgY;gene_synonym=JW3391;ec_number=2.4.1.1;function=enzyme%3B Macromolecule synthesis%2C modification: Polysaccharides - (cytoplasmic);note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0000271 - polysaccharide biosynthetic process;codon_start=1;transl_table=11;product=glycogen phosphorylase;protein_id=AAC76453.1;db_xref=GI:2367228;db_xref=ASAP:ABE-0011198;db_xref=UniProtKB/Swiss-Prot:P0AC86;db_xref=EcoGene:EG10380 EMBL gene 3566600 3568033 . - . ID=.7415;gene=glgA;locus_tag=b3429;gene_synonym=ECK3415;gene_synonym=JW3392;db_xref=EcoGene:EG10377 EMBL CDS 3566600 3568033 . - 0 ID=.7416;gene=glgA;locus_tag=b3429;gene_synonym=ECK3415;gene_synonym=JW3392;ec_number=2.4.1.21;function=enzyme%3B Macromolecule synthesis%2C modification: Polysaccharides - (cytoplasmic);experiment=N-terminus verified by Edman degradation: PMID 1644773;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0000271 - polysaccharide biosynthetic process;codon_start=1;transl_table=11;product=glycogen synthase;protein_id=AAC76454.1;db_xref=GI:1789836;db_xref=ASAP:ABE-0011200;db_xref=UniProtKB/Swiss-Prot:P0A6U8;db_xref=EcoGene:EG10377 EMBL gene 3568033 3569328 . - . ID=.7417;gene=glgC;locus_tag=b3430;gene_synonym=ECK3416;gene_synonym=JW3393;db_xref=EcoGene:EG10379 EMBL CDS 3568033 3569328 . - 0 ID=.7418;gene=glgC;locus_tag=b3430;gene_synonym=ECK3416;gene_synonym=JW3393;ec_number=2.7.7.27;function=enzyme%3B Macromolecule synthesis%2C modification: Polysaccharides - (cytoplasmic);note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0000271 - polysaccharide biosynthetic process;codon_start=1;transl_table=11;product=glucose-1-phosphate adenylyltransferase;protein_id=AAC76455.1;db_xref=GI:1789837;db_xref=ASAP:ABE-0011204;db_xref=UniProtKB/Swiss-Prot:P0A6V1;db_xref=EcoGene:EG10379 EMBL gene 3569346 3571319 . - . ID=.7419;gene=glgX;locus_tag=b3431;gene_synonym=ECK3417;gene_synonym=JW3394;db_xref=EcoGene:EG10381 EMBL CDS 3569346 3571319 . - 0 ID=.7420;gene=glgX;locus_tag=b3431;gene_synonym=ECK3417;gene_synonym=JW3394;ec_number=3.2.1.-;function=enzyme%3B Macromolecule synthesis%2C modification: Polysaccharides - (cytoplasmic);note=part of glycogen operon%2C a glycosyl hydrolase%2C debranching enzyme%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0000271 - polysaccharide biosynthetic process;codon_start=1;transl_table=11;product=glycogen debranching enzyme;protein_id=AAC76456.1;db_xref=GI:2367229;db_xref=ASAP:ABE-0011206;db_xref=UniProtKB/Swiss-Prot:P15067;db_xref=EcoGene:EG10381 EMBL gene 3571316 3573502 . - . ID=.7421;gene=glgB;locus_tag=b3432;gene_synonym=ECK3418;gene_synonym=JW3395;db_xref=EcoGene:EG10378 EMBL CDS 3571316 3573502 . - 0 ID=.7422;gene=glgB;locus_tag=b3432;gene_synonym=ECK3418;gene_synonym=JW3395;ec_number=2.4.1.18;function=enzyme%3B Macromolecule synthesis%2C modification: Polysaccharides - (cytoplasmic);note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0000271 - polysaccharide biosynthetic process;codon_start=1;transl_table=11;product=1%2C4-alpha-glucan branching enzyme;protein_id=AAC76457.1;db_xref=GI:1789839;db_xref=ASAP:ABE-0011209;db_xref=UniProtKB/Swiss-Prot:P07762;db_xref=EcoGene:EG10378 EMBL gene 3573775 3574878 . - . ID=.7423;gene=asd;locus_tag=b3433;gene_synonym=dap;gene_synonym=ECK3419;gene_synonym=hom;gene_synonym=JW3396;db_xref=EcoGene:EG10088 EMBL CDS 3573775 3574878 . - 0 ID=.7424;gene=asd;locus_tag=b3433;gene_synonym=dap;gene_synonym=ECK3419;gene_synonym=hom;gene_synonym=JW3396;ec_number=1.2.1.11;function=enzyme%3B Amino acid biosynthesis: Lysine;experiment=N-terminus verified by Edman degradation: PMID 9298646;note=aspartate-semialdehyde dehydrogenase%3B GO_process: GO:0009089 - lysine biosynthetic process via diaminopimelate%3B GO_process: GO:0009088 - threonine biosynthetic process%3B GO_process: GO:0009086 - methionine biosynthetic process%3B GO_process: GO:0009090 - homoserine biosynthetic process;codon_start=1;transl_table=11;product=aspartate-semialdehyde dehydrogenase%2C NAD(P)-binding;protein_id=AAC76458.1;db_xref=GI:1789841;db_xref=ASAP:ABE-0011211;db_xref=UniProtKB/Swiss-Prot:P0A9Q9;db_xref=EcoGene:EG10088 EMBL gene 3575071 3575664 . + . ID=.7425;gene=yhgN;locus_tag=b3434;gene_synonym=ECK3420;gene_synonym=JW3397;db_xref=EcoGene:EG12941 EMBL CDS 3575071 3575664 . + 0 ID=.7426;gene=yhgN;locus_tag=b3434;gene_synonym=ECK3420;gene_synonym=JW3397;note=GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=UPF0056 family inner membrane protein;protein_id=AAC76459.1;db_xref=GI:1789842;db_xref=ASAP:ABE-0011216;db_xref=UniProtKB/Swiss-Prot:P67143;db_xref=EcoGene:EG12941 EMBL gene 3575721 3577061 . - . ID=.7427;gene=gntU;locus_tag=b4476;gene_synonym=ECK3421;gene_synonym=JW5686;db_xref=EcoGene:EG12631 EMBL CDS 3575721 3577061 . - 0 ID=.7428;gene=gntU;locus_tag=b4476;gene_synonym=ECK3421;gene_synonym=JW5686;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=split gene%2C low-affinity gluconate transport permease protein in GNT I system%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=gluconate transporter%2C low affinity GNT 1 system;protein_id=AAT48183.1;db_xref=GI:48994939;db_xref=ASAP:ABE-0174105;db_xref=UniProtKB/Swiss-Prot:P0AC96;db_xref=EcoGene:EG12631 EMBL gene 3577065 3577592 . - . ID=.7429;gene=gntK;locus_tag=b3437;gene_synonym=ECK3422;gene_synonym=JW3400;db_xref=EcoGene:EG12629 EMBL CDS 3577065 3577592 . - 0 ID=.7430;gene=gntK;locus_tag=b3437;gene_synonym=ECK3422;gene_synonym=JW3400;ec_number=2.7.1.12;function=enzyme%3B Central intermediary metabolism: Miscellaneous glucose metabolism;note=gluconokinase 2%2C thermoresistant%3B gluconate transport%2C GNT I system%3B GO_process: GO:0006006 - glucose metabolic process;codon_start=1;transl_table=11;product=gluconate kinase 2;protein_id=AAC76462.2;db_xref=GI:87082265;db_xref=ASAP:ABE-0011224;db_xref=UniProtKB/Swiss-Prot:P46859;db_xref=EcoGene:EG12629 EMBL gene 3577731 3578726 . - . ID=.7431;gene=gntR;locus_tag=b3438;gene_synonym=ECK3423;gene_synonym=JW5946;db_xref=EcoGene:EG12630 EMBL CDS 3577731 3578726 . - 0 ID=.7432;gene=gntR;locus_tag=b3438;gene_synonym=ECK3423;gene_synonym=JW5946;function=regulator%3B Central intermediary metabolism: Entner-Douderoff;note=regulator of gluconate (gnt) operon%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0009255 - Entner-Doudoroff pathway%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=d-gluconate inducible gluconate regulon transcriptional repressor;protein_id=AAT48184.1;db_xref=GI:48994940;db_xref=ASAP:ABE-0011226;db_xref=UniProtKB/Swiss-Prot:P0ACP5;db_xref=EcoGene:EG12630 EMBL gene 3578950 3579645 . - . ID=.7433;gene=yhhW;locus_tag=b3439;gene_synonym=ECK3424;gene_synonym=JW3402;db_xref=EcoGene:EG12943 EMBL CDS 3578950 3579645 . - 0 ID=.7434;gene=yhhW;locus_tag=b3439;gene_synonym=ECK3424;gene_synonym=JW3402;codon_start=1;transl_table=11;product=quercetinase activity in vitro;protein_id=AAC76464.1;db_xref=GI:1789847;db_xref=ASAP:ABE-0011228;db_xref=UniProtKB/Swiss-Prot:P46852;db_xref=EcoGene:EG12943 EMBL gene 3579768 3580805 . - . ID=.7435;gene=yhhX;locus_tag=b3440;gene_synonym=ECK3425;gene_synonym=JW3403;db_xref=EcoGene:EG12944 EMBL CDS 3579768 3580805 . - 0 ID=.7436;gene=yhhX;locus_tag=b3440;gene_synonym=ECK3425;gene_synonym=JW3403;function=putative regulator%3B Not classified;note=putative regulator;codon_start=1;transl_table=11;product=putative oxidoreductase;protein_id=AAC76465.1;db_xref=GI:1789848;db_xref=ASAP:ABE-0011232;db_xref=UniProtKB/Swiss-Prot:P46853;db_xref=EcoGene:EG12944 EMBL gene 3580927 3581016 . - . ID=.7437;gene=ryhB;locus_tag=b4451;gene_synonym=ECK3426;gene_synonym=IS176;gene_synonym=JWR0219;gene_synonym=psrA18;gene_synonym=sraI;db_xref=EcoGene:EG31133 EMBL ncRNA 3580927 3581016 . - . ID=.7438;ncrna_class=antisense_RNA;gene=ryhB;locus_tag=b4451;gene_synonym=ECK3426;gene_synonym=IS176;gene_synonym=JWR0219;gene_synonym=psrA18;gene_synonym=sraI;product=sRNA antisense regulator mediating positive Fur regulon response%2C Hfq-dependent%3B global iron regulator;note=Fur represses this inhibitory RNA%2C relieving acnA%2C fumA%2C sdhCDAB%2C bfr%2C ftnA%2C and sodB from RyhB-mediated repression%3B gvcB is regulated by gcvA and gcvR;db_xref=ASAP:ABE-0047271;db_xref=EcoGene:EG31133 EMBL gene 3581138 3581626 . + . ID=.7439;gene=yhhY;locus_tag=b3441;gene_synonym=ECK3427;gene_synonym=JW3405;db_xref=EcoGene:EG12945 EMBL CDS 3581138 3581626 . + 0 ID=.7440;gene=yhhY;locus_tag=b3441;gene_synonym=ECK3427;gene_synonym=JW3405;function=enzyme%3B Not classified;codon_start=1;transl_table=11;product=aminoacyl nucleotide detoxifying acetyltransferase;protein_id=AAC76466.1;db_xref=GI:1789849;db_xref=ASAP:ABE-0011240;db_xref=UniProtKB/Swiss-Prot:P46854;db_xref=EcoGene:EG12945 EMBL gene 3581863 3583041 . + . ID=.7441;gene=yhhZ;locus_tag=b3442;gene_synonym=ECK3428;gene_synonym=JW3406;db_xref=EcoGene:EG12946 EMBL CDS 3581863 3583041 . + 0 ID=.7442;gene=yhhZ;locus_tag=b3442;gene_synonym=ECK3428;gene_synonym=JW3406;codon_start=1;transl_table=11;product=putative Hcp1 family polymorphic toxin protein%3B putative colicin-like DNase/tRNase activity;protein_id=AAC76467.1;db_xref=GI:1789850;db_xref=ASAP:ABE-0011244;db_xref=UniProtKB/Swiss-Prot:P46855;db_xref=EcoGene:EG12946 EMBL biological_region 3583038 3584309 . + . ID=.7443;featflags=type:gene;gene=yrhA;locus_tag=b3443;gene_synonym=ECK3429;gene_synonym=JW5864;pseudo=true;db_xref=EcoGene:EG12947 EMBL gene 3583038 3583418 . + . Parent=.7443 EMBL gene 3584196 3584309 . + . Parent=.7443 EMBL biological_region 3583038 3584309 . + 0 ID=.7446;featflags=type:CDS;gene=yrhA;locus_tag=b3443;gene_synonym=ECK3429;gene_synonym=JW5864;note=pseudogene%2C interrupted by IS1E;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0011246;db_xref=UniProtKB/Swiss-Prot:P46856;db_xref=EcoGene:EG12947 EMBL CDS 3583038 3583418 . + 0 Parent=.7446 EMBL CDS 3584196 3584309 . + 0 Parent=.7446 EMBL sequence_feature 3583428 3584195 . + . ID=.7449;note=*mobile_element_type: insertion sequence:IS1E EMBL gene 3583483 3583758 . + . ID=.7450;gene=insA;locus_tag=b3444;gene_synonym=ECK4556;note=insA5;db_xref=EcoGene:EG40001 EMBL CDS 3583483 3583758 . + 0 ID=.7451;gene=insA;locus_tag=b3444;gene_synonym=ECK4556;function=IS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;codon_start=1;transl_table=11;product=IS1 repressor TnpA;protein_id=AAC76469.1;db_xref=GI:1789852;db_xref=ASAP:ABE-0011249;db_xref=UniProtKB/Swiss-Prot:P0CF11;db_xref=EcoGene:EG40001 EMBL gene 3583677 3584180 . + . ID=.7452;gene=insB1;locus_tag=b3445;gene_synonym=ECK0022;db_xref=EcoGene:EG40002 EMBL CDS 3583677 3584180 . + 0 ID=.7453;gene=insB1;locus_tag=b3445;gene_synonym=ECK0022;function=IS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;codon_start=1;transl_table=11;product=IS1 transposase B;protein_id=AAC76470.1;db_xref=GI:1789853;db_xref=ASAP:ABE-0011251;db_xref=UniProtKB/Swiss-Prot:P0CF28;db_xref=EcoGene:EG40002 EMBL gene 3584759 3585043 . + . ID=.7454;gene=yrhB;locus_tag=b3446;gene_synonym=ECK3430;gene_synonym=JW3411;db_xref=EcoGene:EG12948 EMBL CDS 3584759 3585043 . + 0 ID=.7455;gene=yrhB;locus_tag=b3446;gene_synonym=ECK3430;gene_synonym=JW3411;function=factor%3B Adaptations%2C atypical conditions;codon_start=1;transl_table=11;product=stable heat shock chaperone;protein_id=AAC76471.1;db_xref=GI:1789855;db_xref=ASAP:ABE-0011255;db_xref=UniProtKB/Swiss-Prot:P46857;db_xref=EcoGene:EG12948 EMBL gene 3585081 3586823 . - . ID=.7456;gene=ggt;locus_tag=b3447;gene_synonym=ECK3431;gene_synonym=JW3412;db_xref=EcoGene:EG10374 EMBL CDS 3585081 3586823 . - 0 ID=.7457;gene=ggt;locus_tag=b3447;gene_synonym=ECK3431;gene_synonym=JW3412;ec_number=2.3.2.2;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Thioredoxin%2C glutaredoxin%2C glutathione;codon_start=1;transl_table=11;product=gamma-glutamyltranspeptidase;protein_id=AAC76472.1;db_xref=GI:1789856;db_xref=ASAP:ABE-0011257;db_xref=UniProtKB/Swiss-Prot:P18956;db_xref=EcoGene:EG10374 EMBL gene 3586943 3587383 . + . ID=.7458;gene=yhhA;locus_tag=b3448;gene_synonym=ECK3432;gene_synonym=JW3413;db_xref=EcoGene:EG11184 EMBL CDS 3586943 3587383 . + 0 ID=.7459;gene=yhhA;locus_tag=b3448;gene_synonym=ECK3432;gene_synonym=JW3413;codon_start=1;transl_table=11;product=DUF2756 family protein;protein_id=AAC76473.1;db_xref=GI:1789857;db_xref=ASAP:ABE-0011262;db_xref=UniProtKB/Swiss-Prot:P0ADX7;db_xref=EcoGene:EG11184 EMBL gene 3587370 3588113 . - . ID=.7460;gene=ugpQ;locus_tag=b3449;gene_synonym=ECK3433;gene_synonym=JW3414;db_xref=EcoGene:EG11050 EMBL CDS 3587370 3588113 . - 0 ID=.7461;gene=ugpQ;locus_tag=b3449;gene_synonym=ECK3433;gene_synonym=JW3414;ec_number=3.1.4.46;function=enzyme%3B Central intermediary metabolism: Pool%2C multipurpose conversions;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006071 - glycerol metabolic process;codon_start=1;transl_table=11;product=glycerophosphodiester phosphodiesterase%2C cytosolic;protein_id=AAC76474.1;db_xref=GI:1789858;db_xref=ASAP:ABE-0011264;db_xref=UniProtKB/Swiss-Prot:P10908;db_xref=EcoGene:EG11050 EMBL gene 3588110 3589180 . - . ID=.7462;gene=ugpC;locus_tag=b3450;gene_synonym=ECK3434;gene_synonym=JW3415;db_xref=EcoGene:EG11048 EMBL CDS 3588110 3589180 . - 0 ID=.7463;gene=ugpC;locus_tag=b3450;gene_synonym=ECK3434;gene_synonym=JW3415;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=ATP-binding component of sn-glycerol 3-phosphate transport system%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009060 - aerobic respiration%3B GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0006071 - glycerol metabolic process%3B GO_process: GO:0008654 - phospholipid biosynthetic process;codon_start=1;transl_table=11;product=sn-glycerol-3-phosphate ABC transporter ATPase;protein_id=AAC76475.2;db_xref=GI:87082267;db_xref=ASAP:ABE-0011266;db_xref=UniProtKB/Swiss-Prot:P10907;db_xref=EcoGene:EG11048 EMBL gene 3589182 3590027 . - . ID=.7464;gene=ugpE;locus_tag=b3451;gene_synonym=ECK3435;gene_synonym=JW3416;db_xref=EcoGene:EG11049 EMBL CDS 3589182 3590027 . - 0 ID=.7465;gene=ugpE;locus_tag=b3451;gene_synonym=ECK3435;gene_synonym=JW3416;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=sn-glycerol 3-phosphate transport system%2C integral membrane protein%3B membrane component of ABC superfamily%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009060 - aerobic respiration%3B GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0006071 - glycerol metabolic process%3B GO_process: GO:0008654 - phospholipid biosynthetic process;codon_start=1;transl_table=11;product=sn-glycerol-3-phosphate ABC transporter permease;protein_id=AAC76476.1;db_xref=GI:1789860;db_xref=ASAP:ABE-0011270;db_xref=UniProtKB/Swiss-Prot:P10906;db_xref=EcoGene:EG11049 EMBL gene 3590024 3590911 . - . ID=.7466;gene=ugpA;locus_tag=b3452;gene_synonym=ECK3436;gene_synonym=JW3417;gene_synonym=psiB;gene_synonym=psiC;db_xref=EcoGene:EG11046 EMBL CDS 3590024 3590911 . - 0 ID=.7467;gene=ugpA;locus_tag=b3452;gene_synonym=ECK3436;gene_synonym=JW3417;gene_synonym=psiB;gene_synonym=psiC;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=sn-glycerol 3-phosphate transport system%2C integral membrane protein%3B membrane component of ABC superfamily%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009060 - aerobic respiration%3B GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0006071 - glycerol metabolic process%3B GO_process: GO:0008654 - phospholipid biosynthetic process;codon_start=1;transl_table=11;product=sn-glycerol-3-phosphate ABC transporter permease;protein_id=AAC76477.1;db_xref=GI:1789861;db_xref=ASAP:ABE-0011272;db_xref=UniProtKB/Swiss-Prot:P10905;db_xref=EcoGene:EG11046 EMBL repeat_region 3590933 3590998 . + . ID=.7468;note=REP257 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 3591009 3592325 . - . ID=.7469;gene=ugpB;locus_tag=b3453;gene_synonym=ECK3437;gene_synonym=JW3418;gene_synonym=psiB;gene_synonym=psiC;db_xref=EcoGene:EG11047 EMBL CDS 3591009 3592325 . - 0 ID=.7470;gene=ugpB;locus_tag=b3453;gene_synonym=ECK3437;gene_synonym=JW3418;gene_synonym=psiB;gene_synonym=psiC;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=sn-glycerol 3-phosphate transport system%3B periplasmic binding protein%3B periplasmic-binding component of ABC superfamily%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0009060 - aerobic respiration%3B GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0006071 - glycerol metabolic process%3B GO_process: GO:0008654 - phospholipid biosynthetic process;codon_start=1;transl_table=11;product=sn-glycerol-3-phosphate ABC transporter periplasmic binding protein;protein_id=AAC76478.1;db_xref=GI:1789862;db_xref=ASAP:ABE-0011274;db_xref=UniProtKB/Swiss-Prot:P0AG80;db_xref=EcoGene:EG11047 EMBL repeat_region 3592564 3592662 . + . ID=.7471;note=RIP258 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 3592724 3593437 . - . ID=.7472;gene=livF;locus_tag=b3454;gene_synonym=ECK3438;gene_synonym=JW3419;db_xref=EcoGene:EG10536 EMBL CDS 3592724 3593437 . - 0 ID=.7473;gene=livF;locus_tag=b3454;gene_synonym=ECK3438;gene_synonym=JW3419;function=transport%3B Transport of small molecules: Amino acids%2C amines;note=ATP-binding component of leucine transport%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009063 - cellular amino acid catabolic process%3B GO_process: GO:0009098 - leucine biosynthetic process;codon_start=1;transl_table=11;product=branched-chain amino acid ABC transporter ATPase;protein_id=AAC76479.2;db_xref=GI:87082268;db_xref=ASAP:ABE-0011282;db_xref=UniProtKB/Swiss-Prot:P22731;db_xref=EcoGene:EG10536 EMBL gene 3593439 3594206 . - . ID=.7474;gene=livG;locus_tag=b3455;gene_synonym=ECK3439;gene_synonym=hrbB;gene_synonym=hrbC;gene_synonym=hrbD;gene_synonym=JW3420;db_xref=EcoGene:EG10537 EMBL CDS 3593439 3594206 . - 0 ID=.7475;gene=livG;locus_tag=b3455;gene_synonym=ECK3439;gene_synonym=hrbB;gene_synonym=hrbC;gene_synonym=hrbD;gene_synonym=JW3420;function=transport%3B Transport of small molecules: Amino acids%2C amines;note=ATP-binding component of high-affinity branched-chain amino acid transport system%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009063 - cellular amino acid catabolic process%3B GO_process: GO:0009098 - leucine biosynthetic process;codon_start=1;transl_table=11;product=branched-chain amino acid ABC transporter ATPase;protein_id=AAC76480.1;db_xref=GI:1789864;db_xref=ASAP:ABE-0011284;db_xref=UniProtKB/Swiss-Prot:P0A9S7;db_xref=EcoGene:EG10537 EMBL gene 3594203 3595480 . - . ID=.7476;gene=livM;locus_tag=b3456;gene_synonym=ECK3440;gene_synonym=JW3421;db_xref=EcoGene:EG10541 EMBL CDS 3594203 3595480 . - 0 ID=.7477;gene=livM;locus_tag=b3456;gene_synonym=ECK3440;gene_synonym=JW3421;function=transport%3B Transport of small molecules: Amino acids%2C amines;note=high-affinity branched-chain amino acid transport%3B membrane component of ABC superfamily%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009098 - leucine biosynthetic process;codon_start=1;transl_table=11;product=branched-chain amino acid ABC transporter permease;protein_id=AAC76481.1;db_xref=GI:1789865;db_xref=ASAP:ABE-0011287;db_xref=UniProtKB/Swiss-Prot:P22729;db_xref=EcoGene:EG10541 EMBL gene 3595477 3596403 . - . ID=.7478;gene=livH;locus_tag=b3457;gene_synonym=ECK3441;gene_synonym=hrbB;gene_synonym=hrbC;gene_synonym=hrbD;gene_synonym=JW3422;db_xref=EcoGene:EG10538 EMBL CDS 3595477 3596403 . - 0 ID=.7479;gene=livH;locus_tag=b3457;gene_synonym=ECK3441;gene_synonym=hrbB;gene_synonym=hrbC;gene_synonym=hrbD;gene_synonym=JW3422;function=transport%3B Transport of small molecules: Amino acids%2C amines;note=high-affinity branched-chain amino acid transport system%3B membrane component%3B membrane component of ABC superfamily%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009098 - leucine biosynthetic process;codon_start=1;transl_table=11;product=branched-chain amino acid ABC transporter permease;protein_id=AAC76482.1;db_xref=GI:1789866;db_xref=ASAP:ABE-0011290;db_xref=UniProtKB/Swiss-Prot:P0AEX7;db_xref=EcoGene:EG10538 EMBL gene 3596451 3597560 . - . ID=.7480;gene=livK;locus_tag=b3458;gene_synonym=ECK3442;gene_synonym=hrbB;gene_synonym=hrbC;gene_synonym=hrbD;gene_synonym=JW3423;db_xref=EcoGene:EG10540 EMBL CDS 3596451 3597560 . - 0 ID=.7481;gene=livK;locus_tag=b3458;gene_synonym=ECK3442;gene_synonym=hrbB;gene_synonym=hrbC;gene_synonym=hrbD;gene_synonym=JW3423;function=transport%3B Transport of small molecules: Amino acids%2C amines;note=high-affinity leucine-specific transport system%3B periplasmic binding protein%3B periplasmic-binding component of ABC superfamily%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0009098 - leucine biosynthetic process;codon_start=1;transl_table=11;product=leucine transporter subunit;protein_id=AAC76483.1;db_xref=GI:1789867;db_xref=ASAP:ABE-0011292;db_xref=UniProtKB/Swiss-Prot:P04816;db_xref=EcoGene:EG10540 EMBL gene 3597984 3598367 . + . ID=.7482;gene=panM;locus_tag=b3459;gene_synonym=ECK3443;gene_synonym=JW3424;gene_synonym=livL;gene_synonym=panZ;gene_synonym=yhhK;db_xref=EcoGene:EG12211 EMBL CDS 3597984 3598367 . + 0 ID=.7483;gene=panM;locus_tag=b3459;gene_synonym=ECK3443;gene_synonym=JW3424;gene_synonym=livL;gene_synonym=panZ;gene_synonym=yhhK;function=factor%3B Biosynthesis of cofactors%2C carriers: Pantothenate;codon_start=1;transl_table=11;product=PanD autocleavage accelerator%2C panothenate synthesis;protein_id=AAC76484.1;db_xref=GI:1789869;db_xref=ASAP:ABE-0011296;db_xref=UniProtKB/Swiss-Prot:P37613;db_xref=EcoGene:EG12211 EMBL repeat_region 3598397 3598495 . + . ID=.7484;note=RIP259 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 3598555 3599658 . - . ID=.7485;gene=livJ;locus_tag=b3460;gene_synonym=ECK3444;gene_synonym=hrbB;gene_synonym=hrbC;gene_synonym=hrbD;gene_synonym=JW3425;db_xref=EcoGene:EG10539 EMBL CDS 3598555 3599658 . - 0 ID=.7486;gene=livJ;locus_tag=b3460;gene_synonym=ECK3444;gene_synonym=hrbB;gene_synonym=hrbC;gene_synonym=hrbD;gene_synonym=JW3425;function=transport%3B Transport of small molecules: Amino acids%2C amines;note=high-affinity branched-chain amino acid transport protein (ABC superfamily%2C peri_bind)%3B periplasmic-binding component of ABC superfamily%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0009098 - leucine biosynthetic process;codon_start=1;transl_table=11;product=branched-chain amino acid ABC transporter periplasmic binding protein;protein_id=AAT48185.1;db_xref=GI:48994941;db_xref=ASAP:ABE-0011299;db_xref=UniProtKB/Swiss-Prot:P0AD96;db_xref=EcoGene:EG10539 EMBL gene 3599929 3600783 . - . ID=.7487;gene=rpoH;locus_tag=b3461;gene_synonym=ECK3445;gene_synonym=fam;gene_synonym=hin;gene_synonym=htpR;gene_synonym=JW3426;db_xref=EcoGene:EG10897 EMBL CDS 3599929 3600783 . - 0 ID=.7488;gene=rpoH;locus_tag=b3461;gene_synonym=ECK3445;gene_synonym=fam;gene_synonym=hin;gene_synonym=htpR;gene_synonym=JW3426;function=factor%3B Global regulatory functions;note=RNA polymerase%2C sigma(32) factor%3B regulation of proteins induced at high temperatures%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006350 - transcription%3B GO_process: GO:0009266 - response to temperature stimulus;codon_start=1;transl_table=11;product=RNA polymerase%2C sigma 32 (sigma H) factor;protein_id=AAC76486.1;db_xref=GI:1789871;db_xref=ASAP:ABE-0011303;db_xref=UniProtKB/Swiss-Prot:P0AGB3;db_xref=EcoGene:EG10897 EMBL gene 3601028 3602086 . - . ID=.7489;gene=ftsX;locus_tag=b3462;gene_synonym=ECK3446;gene_synonym=ftsS;gene_synonym=JW3427;db_xref=EcoGene:EG10345 EMBL CDS 3601028 3602086 . - 0 ID=.7490;gene=ftsX;locus_tag=b3462;gene_synonym=ECK3446;gene_synonym=ftsS;gene_synonym=JW3427;function=membrane%3B Cell division;note=cell division membrane protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative ABC transporter permease;protein_id=AAC76487.1;db_xref=GI:1789872;db_xref=ASAP:ABE-0011311;db_xref=UniProtKB/Swiss-Prot:P0AC30;db_xref=EcoGene:EG10345 EMBL gene 3602079 3602747 . - . ID=.7491;gene=ftsE;locus_tag=b3463;gene_synonym=ECK3447;gene_synonym=JW3428;db_xref=EcoGene:EG10340 EMBL CDS 3602079 3602747 . - 0 ID=.7492;gene=ftsE;locus_tag=b3463;gene_synonym=ECK3447;gene_synonym=JW3428;function=phenotype%3B Not classified;note=ATP-binding component of a membrane-associated complex involved in cell division%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=cell division ATP-binding protein;protein_id=AAC76488.1;db_xref=GI:1789873;db_xref=ASAP:ABE-0011313;db_xref=UniProtKB/Swiss-Prot:P0A9R7;db_xref=EcoGene:EG10340 EMBL gene 3602750 3604243 . - . ID=.7493;gene=ftsY;locus_tag=b3464;gene_synonym=ECK3448;gene_synonym=JW3429;db_xref=EcoGene:EG10346 EMBL CDS 3602750 3604243 . - 0 ID=.7494;gene=ftsY;locus_tag=b3464;gene_synonym=ECK3448;gene_synonym=JW3429;function=membrane%3B Cell division;note=cell division membrane protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=Signal Recognition Particle (SRP) receptor;protein_id=AAC76489.1;db_xref=GI:1789874;db_xref=ASAP:ABE-0011318;db_xref=UniProtKB/Swiss-Prot:P10121;db_xref=EcoGene:EG10346 EMBL gene 3604393 3604989 . + . ID=.7495;gene=rsmD;locus_tag=b3465;gene_synonym=ECK3449;gene_synonym=JW3430;gene_synonym=yhhF;db_xref=EcoGene:EG10343 EMBL CDS 3604393 3604989 . + 0 ID=.7496;gene=rsmD;locus_tag=b3465;gene_synonym=ECK3449;gene_synonym=JW3430;gene_synonym=yhhF;function=enzyme%3B rRNA modification;codon_start=1;transl_table=11;product=16S rRNA m(2)G966 methyltransferase%2C SAM-dependent;protein_id=AAC76490.1;db_xref=GI:1789875;db_xref=ASAP:ABE-0011321;db_xref=UniProtKB/Swiss-Prot:P0ADX9;db_xref=EcoGene:EG10343 EMBL gene 3604979 3605248 . + . ID=.7497;gene=yhhL;locus_tag=b3466;gene_synonym=ECK3450;gene_synonym=JW5683;db_xref=EcoGene:EG12212 EMBL CDS 3604979 3605248 . + 0 ID=.7498;gene=yhhL;locus_tag=b3466;gene_synonym=ECK3450;gene_synonym=JW5683;codon_start=1;transl_table=11;product=DUF1145 family protein;protein_id=AAC76491.1;db_xref=GI:1789876;db_xref=ASAP:ABE-0011323;db_xref=UniProtKB/Swiss-Prot:P37614;db_xref=EcoGene:EG12212 EMBL gene 3605251 3605610 . - . ID=.7499;gene=yhhM;locus_tag=b3467;gene_synonym=ECK3451;gene_synonym=JW3432;db_xref=EcoGene:EG12213 EMBL CDS 3605251 3605610 . - 0 ID=.7500;gene=yhhM;locus_tag=b3467;gene_synonym=ECK3451;gene_synonym=JW3432;function=putative factor%3B Not classified;note=putative receptor;codon_start=1;transl_table=11;product=DUF2500 family protein;protein_id=AAC76492.1;db_xref=GI:1789877;db_xref=ASAP:ABE-0011325;db_xref=UniProtKB/Swiss-Prot:P37615;db_xref=EcoGene:EG12213 EMBL gene 3605751 3606377 . + . ID=.7501;gene=yhhN;locus_tag=b3468;gene_synonym=ECK3452;gene_synonym=JW3433;db_xref=EcoGene:EG12214 EMBL CDS 3605751 3606377 . + 0 ID=.7502;gene=yhhN;locus_tag=b3468;gene_synonym=ECK3452;gene_synonym=JW3433;function=putative enzyme%3B Not classified;note=putative enzyme;codon_start=1;transl_table=11;product=TMEM86 family putative inner membrane protein;protein_id=AAC76493.1;db_xref=GI:1789878;db_xref=ASAP:ABE-0011329;db_xref=UniProtKB/Swiss-Prot:P0ADI9;db_xref=EcoGene:EG12214 EMBL gene 3606451 3608649 . + . ID=.7503;gene=zntA;locus_tag=b3469;gene_synonym=ECK3453;gene_synonym=JW3434;gene_synonym=yhhO;db_xref=EcoGene:EG12215 EMBL CDS 3606451 3608649 . + 0 ID=.7504;gene=zntA;locus_tag=b3469;gene_synonym=ECK3453;gene_synonym=JW3434;gene_synonym=yhhO;ec_number=3.6.3.3;ec_number=3.6.3.5;function=transport%3B Transport of small molecules: Cations;note=zinc-transporting ATPase%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_function: GO:0015662 - ATPase activity%2C coupled to transmembrane movement of ions%2C phosphorylative mechanism%3B GO_process: GO:0015986 - ATP synthesis coupled proton transport%3B GO_process: GO:0006805 - xenobiotic metabolic process;codon_start=1;transl_table=11;product=zinc%2C cobalt and lead efflux system;protein_id=AAC76494.1;db_xref=GI:1789879;db_xref=ASAP:ABE-0011332;db_xref=UniProtKB/Swiss-Prot:P37617;db_xref=EcoGene:EG12215 EMBL gene 3608751 3608996 . - . ID=.7505;gene=tusA;locus_tag=b3470;gene_synonym=ECK3454;gene_synonym=JW3435;gene_synonym=sirA;gene_synonym=yhhP;db_xref=EcoGene:EG12216 EMBL CDS 3608751 3608996 . - 0 ID=.7506;gene=tusA;locus_tag=b3470;gene_synonym=ECK3454;gene_synonym=JW3435;gene_synonym=sirA;gene_synonym=yhhP;note=small protein required for cell growth%3B affects RpoS stability%3B small ubiquitous RNA-binding protein required for normal growth%2C cytoplasmic;codon_start=1;transl_table=11;product=mnm(5)-s(2)U34-tRNA 2-thiolation sulfurtransferase;protein_id=AAC76495.1;db_xref=GI:1789881;db_xref=ASAP:ABE-0011336;db_xref=UniProtKB/Swiss-Prot:P0A890;db_xref=EcoGene:EG12216 EMBL gene 3609217 3609882 . + . ID=.7507;gene=yhhQ;locus_tag=b3471;gene_synonym=ECK3455;gene_synonym=JW3436;db_xref=EcoGene:EG12217 EMBL CDS 3609217 3609882 . + 0 ID=.7508;gene=yhhQ;locus_tag=b3471;gene_synonym=ECK3455;gene_synonym=JW3436;note=GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=DUF165 family inner membrane protein;protein_id=AAC76496.1;db_xref=GI:1789882;db_xref=ASAP:ABE-0011340;db_xref=UniProtKB/Swiss-Prot:P37619;db_xref=EcoGene:EG12217 EMBL gene 3609955 3610512 . + . ID=.7509;gene=dcrB;locus_tag=b3472;gene_synonym=ECK3456;gene_synonym=JW5682;gene_synonym=yhhR;db_xref=EcoGene:EG12218 EMBL CDS 3609955 3610512 . + 0 ID=.7510;gene=dcrB;locus_tag=b3472;gene_synonym=ECK3456;gene_synonym=JW5682;gene_synonym=yhhR;codon_start=1;transl_table=11;product=putative lipoprotein;protein_id=AAC76497.2;db_xref=GI:87082269;db_xref=ASAP:ABE-0011342;db_xref=UniProtKB/Swiss-Prot:P0AEE1;db_xref=EcoGene:EG12218 EMBL gene 3610516 3611733 . - . ID=.7511;gene=yhhS;locus_tag=b3473;gene_synonym=ECK3457;gene_synonym=JW5945;db_xref=EcoGene:EG12219 EMBL CDS 3610516 3611733 . - 0 ID=.7512;gene=yhhS;locus_tag=b3473;gene_synonym=ECK3457;gene_synonym=JW5945;function=putative transport%3B Not classified;note=putative transport%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative arabinose efflux transporter;protein_id=AAC76498.2;db_xref=GI:87082270;db_xref=ASAP:ABE-0011344;db_xref=UniProtKB/Swiss-Prot:P37621;db_xref=EcoGene:EG12219 EMBL gene 3611865 3612914 . + . ID=.7513;gene=yhhT;locus_tag=b3474;gene_synonym=ECK3458;gene_synonym=JW5680;db_xref=EcoGene:EG12220 EMBL CDS 3611865 3612914 . + 0 ID=.7514;gene=yhhT;locus_tag=b3474;gene_synonym=ECK3458;gene_synonym=JW5680;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=UPF0118 family putative transporter;protein_id=AAC76499.2;db_xref=GI:87082271;db_xref=ASAP:ABE-0011347;db_xref=UniProtKB/Swiss-Prot:P0AGM0;db_xref=EcoGene:EG12220 EMBL gene 3612969 3613556 . + . ID=.7515;gene=acpT;locus_tag=b3475;gene_synonym=ECK3459;gene_synonym=JW3440;gene_synonym=yhhU;db_xref=EcoGene:EG12221 EMBL CDS 3612969 3613556 . + 0 ID=.7516;gene=acpT;locus_tag=b3475;gene_synonym=ECK3459;gene_synonym=JW3440;gene_synonym=yhhU;ec_number=2.7.8.-;codon_start=1;transl_table=11;product=4'-phosphopantetheinyl transferase;protein_id=AAC76500.1;db_xref=GI:1789886;db_xref=ASAP:ABE-0011351;db_xref=UniProtKB/Swiss-Prot:P37623;db_xref=EcoGene:EG12221 EMBL gene 3613667 3615241 . + . ID=.7517;gene=nikA;locus_tag=b3476;gene_synonym=ECK3460;gene_synonym=hydC;gene_synonym=hydD;gene_synonym=JW3441;db_xref=EcoGene:EG12075 EMBL CDS 3613667 3615241 . + 0 ID=.7518;gene=nikA;locus_tag=b3476;gene_synonym=ECK3460;gene_synonym=hydC;gene_synonym=hydD;gene_synonym=JW3441;function=transport%3B Transport of small molecules: Cations;note=periplasmic binding protein for nickel%3B periplasmic-binding component of ABC superfamily%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0042330 - taxis;codon_start=1;transl_table=11;product=nickel/heme ABC transporter periplasmic binding protein;protein_id=AAC76501.1;db_xref=GI:1789887;db_xref=ASAP:ABE-0011354;db_xref=UniProtKB/Swiss-Prot:P33590;db_xref=EcoGene:EG12075 EMBL gene 3615241 3616185 . + . ID=.7519;gene=nikB;locus_tag=b3477;gene_synonym=ECK3461;gene_synonym=hydC;gene_synonym=hydD;gene_synonym=JW3442;db_xref=EcoGene:EG12076 EMBL CDS 3615241 3616185 . + 0 ID=.7520;gene=nikB;locus_tag=b3477;gene_synonym=ECK3461;gene_synonym=hydC;gene_synonym=hydD;gene_synonym=JW3442;function=transport%3B Transport of small molecules: Cations;note=transport of nickel%2C membrane protein%3B membrane component of ABC superfamily%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=nickel ABC transporter permease;protein_id=AAC76502.1;db_xref=GI:1789888;db_xref=ASAP:ABE-0011356;db_xref=UniProtKB/Swiss-Prot:P33591;db_xref=EcoGene:EG12076 EMBL gene 3616182 3617015 . + . ID=.7521;gene=nikC;locus_tag=b3478;gene_synonym=ECK3462;gene_synonym=hydC;gene_synonym=hydD;gene_synonym=JW3443;db_xref=EcoGene:EG12077 EMBL CDS 3616182 3617015 . + 0 ID=.7522;gene=nikC;locus_tag=b3478;gene_synonym=ECK3462;gene_synonym=hydC;gene_synonym=hydD;gene_synonym=JW3443;function=transport%3B Transport of small molecules: Cations;note=transport of nickel%2C membrane protein%3B membrane component of ABC superfamily%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=nickel ABC transporter permease;protein_id=AAC76503.1;db_xref=GI:1789889;db_xref=ASAP:ABE-0011358;db_xref=UniProtKB/Swiss-Prot:P0AFA9;db_xref=EcoGene:EG12077 EMBL gene 3617015 3617779 . + . ID=.7523;gene=nikD;locus_tag=b3479;gene_synonym=ECK3463;gene_synonym=hydC;gene_synonym=hydD;gene_synonym=JW3444;db_xref=EcoGene:EG12078 EMBL CDS 3617015 3617779 . + 0 ID=.7524;gene=nikD;locus_tag=b3479;gene_synonym=ECK3463;gene_synonym=hydC;gene_synonym=hydD;gene_synonym=JW3444;function=transport%3B Transport of small molecules: Cations;note=ATP-binding protein of nickel transport system%3B ATP-binding component of ABC superfamily%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009060 - aerobic respiration%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=nickel ABC transporter ATPase;protein_id=AAC76504.1;db_xref=GI:1789890;db_xref=ASAP:ABE-0011360;db_xref=UniProtKB/Swiss-Prot:P33593;db_xref=EcoGene:EG12078 EMBL gene 3617776 3618582 . + . ID=.7525;gene=nikE;locus_tag=b3480;gene_synonym=ECK3464;gene_synonym=hydC;gene_synonym=hydD;gene_synonym=JW3445;db_xref=EcoGene:EG12079 EMBL CDS 3617776 3618582 . + 0 ID=.7526;gene=nikE;locus_tag=b3480;gene_synonym=ECK3464;gene_synonym=hydC;gene_synonym=hydD;gene_synonym=JW3445;function=transport%3B Transport of small molecules: Cations;note=ATP-binding protein of nickel transport system%3B ATP-binding component of ABC superfamily%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009060 - aerobic respiration%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=nickel ABC transporter ATPase;protein_id=AAC76505.1;db_xref=GI:1789891;db_xref=ASAP:ABE-0011362;db_xref=UniProtKB/Swiss-Prot:P33594;db_xref=EcoGene:EG12079 EMBL gene 3618588 3618989 . + . ID=.7527;gene=nikR;locus_tag=b3481;gene_synonym=ECK3465;gene_synonym=JW3446;gene_synonym=yhhG;db_xref=EcoGene:EG11519 EMBL CDS 3618588 3618989 . + 0 ID=.7528;gene=nikR;locus_tag=b3481;gene_synonym=ECK3465;gene_synonym=JW3446;gene_synonym=yhhG;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=transcriptional repressor%2C Ni-binding;protein_id=AAC76506.1;db_xref=GI:1789892;db_xref=ASAP:ABE-0011366;db_xref=UniProtKB/Swiss-Prot:P0A6Z6;db_xref=EcoGene:EG11519 EMBL gene 3619192 3623427 . + . ID=.7529;gene=rhsB;locus_tag=b3482;gene_synonym=ECK3466;gene_synonym=JW5679;db_xref=EcoGene:EG10847 EMBL CDS 3619192 3623427 . + 0 ID=.7530;gene=rhsB;locus_tag=b3482;gene_synonym=ECK3466;gene_synonym=JW5679;note=rhsB protein in rhs element;codon_start=1;transl_table=11;product=Rhs protein with DUF4329 family putative toxin domain%3B putative neighboring cell growth inhibitor;protein_id=AAT48186.1;db_xref=GI:48994942;db_xref=ASAP:ABE-0011371;db_xref=UniProtKB/Swiss-Prot:P16917;db_xref=EcoGene:EG10847 EMBL gene 3623399 3623782 . + . ID=.7531;gene=yhhH;locus_tag=b3483;gene_synonym=ECK3467;gene_synonym=JW3449;db_xref=EcoGene:EG11520 EMBL CDS 3623399 3623782 . + 0 ID=.7532;gene=yhhH;locus_tag=b3483;gene_synonym=ECK3467;gene_synonym=JW3449;codon_start=1;transl_table=11;product=putative NTF2 fold immunity protein for polymorphic toxin RhsB;protein_id=AAC76508.2;db_xref=GI:87082272;db_xref=ASAP:ABE-0011373;db_xref=UniProtKB/Swiss-Prot:P28911;db_xref=EcoGene:EG11520 EMBL gene 3623887 3624237 . + . ID=.7533;gene=yrhC;locus_tag=b4552;gene_synonym=ECK3468;gene_synonym=JW5678;pseudo=true;db_xref=EcoGene:EG14369 EMBL CDS 3623887 3624237 . + 0 ID=.7534;gene=yrhC;locus_tag=b4552;gene_synonym=ECK3468;gene_synonym=JW5678;note=pseudogene fragment%3B GO_component: GO:0005737 - cytoplasm;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0285073;db_xref=EcoGene:EG14369 EMBL gene 3624378 3625514 . + . ID=.7535;gene=yhhI;locus_tag=b3484;gene_synonym=ECK3469;gene_synonym=JW3451;db_xref=EcoGene:EG11525 EMBL CDS 3624378 3625514 . + 0 ID=.7536;gene=yhhI;locus_tag=b3484;gene_synonym=ECK3469;gene_synonym=JW3451;function=putative factor%3B Not classified;note=putative receptor;codon_start=1;transl_table=11;product=putative transposase;protein_id=AAC76509.1;db_xref=GI:1789896;db_xref=ASAP:ABE-0011377;db_xref=UniProtKB/Swiss-Prot:P28912;db_xref=EcoGene:EG11525 EMBL repeat_region 3625589 3625670 . + . ID=.7537;note=RIP260 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 3625679 3626803 . - . ID=.7538;gene=yhhJ;locus_tag=b3485;gene_synonym=ECK3470;gene_synonym=JW5677;db_xref=EcoGene:EG11767 EMBL CDS 3625679 3626803 . - 0 ID=.7539;gene=yhhJ;locus_tag=b3485;gene_synonym=ECK3470;gene_synonym=JW5677;function=putative transport%3B Not classified;note=putative transporter%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative ABC transporter permease;protein_id=AAC76510.4;db_xref=GI:226510979;db_xref=ASAP:ABE-0011379;db_xref=UniProtKB/Swiss-Prot:P0AGH1;db_xref=EcoGene:EG11767 EMBL gene 3626803 3629538 . - . ID=.7540;gene=rbbA;locus_tag=b3486;gene_synonym=ECK3471;gene_synonym=JW5676;gene_synonym=yhiG;gene_synonym=yhiH;db_xref=EcoGene:EG12223 EMBL CDS 3626803 3629538 . - 0 ID=.7541;gene=rbbA;locus_tag=b3486;gene_synonym=ECK3471;gene_synonym=JW5676;gene_synonym=yhiG;gene_synonym=yhiH;function=putative transport%3B Not classified;note=ribosome-associated ATPase%2C ATP-binding domain (N-terminal)%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=ribosome-associated ATPase: ATP-binding protein/ATP-binding membrane protein;protein_id=AAT48187.1;db_xref=GI:48994943;db_xref=ASAP:ABE-0011381;db_xref=UniProtKB/Swiss-Prot:P37624;db_xref=EcoGene:EG12223 EMBL gene 3629535 3630602 . - . ID=.7542;gene=yhiI;locus_tag=b3487;gene_synonym=ECK3472;gene_synonym=JW3454;db_xref=EcoGene:EG12224 EMBL CDS 3629535 3630602 . - 0 ID=.7543;gene=yhiI;locus_tag=b3487;gene_synonym=ECK3472;gene_synonym=JW3454;function=putative membrane%3B Not classified;note=putative membrane protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative membrane fusion protein (MFP) of efflux pump;protein_id=AAC76512.1;db_xref=GI:1789900;db_xref=ASAP:ABE-0011385;db_xref=UniProtKB/Swiss-Prot:P37626;db_xref=EcoGene:EG12224 EMBL gene 3630968 3632590 . - . ID=.7544;gene=yhiJ;locus_tag=b3488;gene_synonym=ECK3473;gene_synonym=JW3455;db_xref=EcoGene:EG12225 EMBL CDS 3630968 3632590 . - 0 ID=.7545;gene=yhiJ;locus_tag=b3488;gene_synonym=ECK3473;gene_synonym=JW3455;codon_start=1;transl_table=11;product=DUF4049 family protein;protein_id=AAC76513.1;db_xref=GI:1789902;db_xref=ASAP:ABE-0011387;db_xref=UniProtKB/Swiss-Prot:P37627;db_xref=EcoGene:EG12225 EMBL gene 3632852 3634458 . - . ID=.7546;gene=yhiL;locus_tag=b4660;gene_synonym=ECK3475;gene_synonym=JW5674;gene_synonym=yhiK;pseudo=true;db_xref=EcoGene:EG12227 EMBL biological_region 3632852 3634458 . - 0 ID=.7547;featflags=type:CDS;gene=yhiL;locus_tag=b4660;gene_synonym=ECK3475;gene_synonym=JW5674;gene_synonym=yhiK;note=pseudogene%2C DUF4049 family protein;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0011391;db_xref=ASAP:ABE-0011393;db_xref=UniProtKB/Swiss-Prot:P37629;db_xref=EcoGene:EG12227 EMBL CDS 3632852 3633265 . - 0 Parent=.7547 EMBL CDS 3633265 3634458 . - 0 Parent=.7547 EMBL gene 3634841 3635893 . + . ID=.7550;gene=yhiM;locus_tag=b3491;gene_synonym=ECK3476;gene_synonym=JW5944;db_xref=EcoGene:EG12228 EMBL CDS 3634841 3635893 . + 0 ID=.7551;gene=yhiM;locus_tag=b3491;gene_synonym=ECK3476;gene_synonym=JW5944;codon_start=1;transl_table=11;product=acid resistance protein%2C inner membrane;protein_id=AAC76516.4;db_xref=GI:226510980;db_xref=ASAP:ABE-0011400;db_xref=UniProtKB/Swiss-Prot:P37630;db_xref=EcoGene:EG12228 EMBL gene 3636208 3637410 . - . ID=.7552;gene=yhiN;locus_tag=b3492;gene_synonym=ECK3477;gene_synonym=JW3459;db_xref=EcoGene:EG12229 EMBL CDS 3636208 3637410 . - 0 ID=.7553;gene=yhiN;locus_tag=b3492;gene_synonym=ECK3477;gene_synonym=JW3459;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=putative oxidoreductase;protein_id=AAC76517.1;db_xref=GI:2367234;db_xref=ASAP:ABE-0011402;db_xref=UniProtKB/Swiss-Prot:P37631;db_xref=EcoGene:EG12229 EMBL gene 3637642 3639141 . + . ID=.7554;gene=pitA;locus_tag=b3493;gene_synonym=ECK3478;gene_synonym=JW3460;gene_synonym=pit;db_xref=EcoGene:EG12230 EMBL CDS 3637642 3639141 . + 0 ID=.7555;gene=pitA;locus_tag=b3493;gene_synonym=ECK3478;gene_synonym=JW3460;gene_synonym=pit;function=transport%3B Transport of small molecules: Anions;note=low-affinity phosphate transport%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006793 - phosphorus metabolic process;codon_start=1;transl_table=11;product=phosphate transporter%2C low-affinity%3B tellurite importer;protein_id=AAC76518.1;db_xref=GI:1789907;db_xref=ASAP:ABE-0011407;db_xref=UniProtKB/Swiss-Prot:P0AFJ7;db_xref=EcoGene:EG12230 EMBL repeat_region 3639209 3639306 . + . ID=.7556;note=RIP261 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 3639385 3639720 . - . ID=.7557;gene=uspB;locus_tag=b3494;gene_synonym=ECK3479;gene_synonym=JW3461;gene_synonym=yhiO;db_xref=EcoGene:EG12231 EMBL CDS 3639385 3639720 . - 0 ID=.7558;gene=uspB;locus_tag=b3494;gene_synonym=ECK3479;gene_synonym=JW3461;gene_synonym=yhiO;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006950 - response to stress%3B GO_process: GO:0006805 - xenobiotic metabolic process;codon_start=1;transl_table=11;product=universal stress (ethanol tolerance) protein B;protein_id=AAC76519.1;db_xref=GI:1789908;db_xref=ASAP:ABE-0011410;db_xref=UniProtKB/Swiss-Prot:P0A8S5;db_xref=EcoGene:EG12231 EMBL gene 3640111 3640545 . + . ID=.7559;gene=uspA;locus_tag=b3495;gene_synonym=ECK3480;gene_synonym=JW3462;db_xref=EcoGene:EG11390 EMBL CDS 3640111 3640545 . + 0 ID=.7560;gene=uspA;locus_tag=b3495;gene_synonym=ECK3480;gene_synonym=JW3462;function=putative regulator%3B Adaptations%2C atypical conditions;note=universal stress protein%3B broad regulatory function?%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006950 - response to stress;codon_start=1;transl_table=11;product=universal stress global response regulator;protein_id=AAC76520.1;db_xref=GI:1789909;db_xref=ASAP:ABE-0011414;db_xref=UniProtKB/Swiss-Prot:P0AED0;db_xref=EcoGene:EG11390 EMBL gene 3640862 3642331 . + . ID=.7561;gene=dtpB;locus_tag=b3496;gene_synonym=ECK3481;gene_synonym=JW3463;gene_synonym=yhiP;db_xref=EcoGene:EG12232 EMBL CDS 3640862 3642331 . + 0 ID=.7562;gene=dtpB;locus_tag=b3496;gene_synonym=ECK3481;gene_synonym=JW3463;gene_synonym=yhiP;function=transport%3B Not classified;note=putative transport protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=dipeptide and tripeptide permease B;protein_id=AAC76521.1;db_xref=GI:1789911;db_xref=ASAP:ABE-0011417;db_xref=UniProtKB/Swiss-Prot:P36837;db_xref=EcoGene:EG12232 EMBL gene 3642380 3643132 . - . ID=.7563;gene=rsmJ;locus_tag=b3497;gene_synonym=ECK3482;gene_synonym=JW5672;gene_synonym=yhiQ;db_xref=EcoGene:EG12233 EMBL CDS 3642380 3643132 . - 0 ID=.7564;gene=rsmJ;locus_tag=b3497;gene_synonym=ECK3482;gene_synonym=JW5672;gene_synonym=yhiQ;function=enzyme%3B rRNA modification;codon_start=1;transl_table=11;product=16S rRNA m(2)G1516 methyltransferase%2C SAM-dependent;protein_id=AAC76522.1;db_xref=GI:1789912;db_xref=ASAP:ABE-0011419;db_xref=UniProtKB/Swiss-Prot:P68567;db_xref=EcoGene:EG12233 EMBL gene 3643140 3645182 . - . ID=.7565;gene=prlC;locus_tag=b3498;gene_synonym=ECK3483;gene_synonym=JW3465;gene_synonym=opdA;db_xref=EcoGene:EG11441 EMBL CDS 3643140 3645182 . - 0 ID=.7566;gene=prlC;locus_tag=b3498;gene_synonym=ECK3483;gene_synonym=JW3465;gene_synonym=opdA;ec_number=3.4.24.70;function=enzyme%3B Degradation of proteins%2C peptides%2C glyco;codon_start=1;transl_table=11;product=oligopeptidase A;protein_id=AAC76523.1;db_xref=GI:1789913;db_xref=ASAP:ABE-0011421;db_xref=UniProtKB/Swiss-Prot:P27298;db_xref=EcoGene:EG11441 EMBL gene 3645385 3646227 . + . ID=.7567;gene=rlmJ;locus_tag=b3499;gene_synonym=ECK3484;gene_synonym=JW3466;gene_synonym=yhiR;db_xref=EcoGene:EG12234 EMBL CDS 3645385 3646227 . + 0 ID=.7568;gene=rlmJ;locus_tag=b3499;gene_synonym=ECK3484;gene_synonym=JW3466;gene_synonym=yhiR;function=enzyme%3B rRNA modification;codon_start=1;transl_table=11;product=23S rRNA m(6)A2030 methyltransferase%2C SAM-dependent;protein_id=AAC76524.1;db_xref=GI:1789914;db_xref=ASAP:ABE-0011428;db_xref=UniProtKB/Swiss-Prot:P37634;db_xref=EcoGene:EG12234 EMBL gene 3646299 3647651 . + . ID=.7569;gene=gor;locus_tag=b3500;gene_synonym=ECK3485;gene_synonym=gorA;gene_synonym=JW3467;db_xref=EcoGene:EG10412 EMBL CDS 3646299 3647651 . + 0 ID=.7570;gene=gor;locus_tag=b3500;gene_synonym=ECK3485;gene_synonym=gorA;gene_synonym=JW3467;ec_number=1.8.1.7;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Thioredoxin%2C glutaredoxin%2C glutathione;note=GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=glutathione oxidoreductase;protein_id=AAC76525.1;db_xref=GI:1789915;db_xref=ASAP:ABE-0011432;db_xref=UniProtKB/Swiss-Prot:P06715;db_xref=EcoGene:EG10412 EMBL gene 3647705 3647788 . - . ID=.7571;gene=dinQ;locus_tag=b4613;gene_synonym=ECK4422;db_xref=EcoGene:EG14431 EMBL CDS 3647705 3647788 . - 0 ID=.7572;gene=dinQ;locus_tag=b4613;gene_synonym=ECK4422;codon_start=1;transl_table=11;product=UV-inducible membrane toxin%2C DinQ-AgrB type I toxin-antitoxin system;protein_id=ABP93453.2;db_xref=GI:558094919;db_xref=UniProtKB/Swiss-Prot:A5A624;db_xref=EcoGene:EG14431 EMBL gene 3648063 3648146 . + . ID=.7573;gene=agrA;locus_tag=b4712;gene_synonym=ECK4569;db_xref=EcoGene:EG31189 EMBL ncRNA 3648063 3648146 . + . ID=.7574;ncrna_class=antisense_RNA;gene=agrA;locus_tag=b4712;gene_synonym=ECK4569;product=inactive antisense sRNA;db_xref=EcoGene:EG31189 EMBL gene 3648294 3648377 . + . ID=.7575;gene=agrB;locus_tag=b4713;gene_synonym=ECK4570;db_xref=EcoGene:EG31190 EMBL ncRNA 3648294 3648377 . + . ID=.7576;ncrna_class=antisense_RNA;gene=agrB;locus_tag=b4713;gene_synonym=ECK4570;product=antisense sRNA antitoxin for the DinQ toxin;db_xref=EcoGene:EG31190 EMBL gene 3648528 3648881 . + . ID=.7577;gene=arsR;locus_tag=b3501;gene_synonym=arsE;gene_synonym=ECK3486;gene_synonym=JW3468;db_xref=EcoGene:EG12235 EMBL CDS 3648528 3648881 . + 0 ID=.7578;gene=arsR;locus_tag=b3501;gene_synonym=arsE;gene_synonym=ECK3486;gene_synonym=JW3468;function=regulator%3B Drug/analog sensitivity;note=transcriptional repressor of chromosomal ars operon%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription%3B GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=arsenical resistance operon transcriptional repressor%3B autorepressor;protein_id=AAC76526.1;db_xref=GI:1789916;db_xref=ASAP:ABE-0011435;db_xref=UniProtKB/Swiss-Prot:P37309;db_xref=EcoGene:EG12235 EMBL gene 3648935 3650224 . + . ID=.7579;gene=arsB;locus_tag=b3502;gene_synonym=arsF;gene_synonym=ECK3487;gene_synonym=JW3469;db_xref=EcoGene:EG12236 EMBL CDS 3648935 3650224 . + 0 ID=.7580;gene=arsB;locus_tag=b3502;gene_synonym=arsF;gene_synonym=ECK3487;gene_synonym=JW3469;function=transport%3B Drug/analog sensitivity;note=arsenical pump membrane protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006805 - xenobiotic metabolic process;codon_start=1;transl_table=11;product=arsenite/antimonite transporter;protein_id=AAC76527.2;db_xref=GI:87082277;db_xref=ASAP:ABE-0011437;db_xref=UniProtKB/Swiss-Prot:P0AB93;db_xref=EcoGene:EG12236 EMBL gene 3650237 3650662 . + . ID=.7581;gene=arsC;locus_tag=b3503;gene_synonym=arsG;gene_synonym=ECK3488;gene_synonym=JW3470;db_xref=EcoGene:EG12237 EMBL CDS 3650237 3650662 . + 0 ID=.7582;gene=arsC;locus_tag=b3503;gene_synonym=arsG;gene_synonym=ECK3488;gene_synonym=JW3470;ec_number=1.20.4.1;function=enzyme%3B Drug/analog sensitivity;note=GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=arsenate reductase;protein_id=AAC76528.1;db_xref=GI:1789918;db_xref=ASAP:ABE-0011439;db_xref=UniProtKB/Swiss-Prot:P0AB96;db_xref=EcoGene:EG12237 EMBL repeat_region 3650712 3650811 . + . ID=.7583;note=RIP262 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL biological_region 3651291 3653713 . + . ID=.7584;featflags=type:gene;gene=yhiS;locus_tag=b3504;gene_synonym=ECK3489;gene_synonym=JW3471;pseudo=true;db_xref=EcoGene:EG12238 EMBL gene 3651291 3652031 . + . Parent=.7584 EMBL gene 3653231 3653713 . + . Parent=.7584 EMBL biological_region 3651291 3653713 . + 0 ID=.7587;featflags=type:CDS;gene=yhiS;locus_tag=b3504;gene_synonym=ECK3489;gene_synonym=JW3471;note=pseudogene;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0011443;db_xref=UniProtKB/Swiss-Prot:P37635;db_xref=EcoGene:EG12238 EMBL CDS 3651291 3652031 . + 0 Parent=.7587 EMBL CDS 3653231 3653713 . + 0 Parent=.7587 EMBL sequence_feature 3652036 3653230 . - . ID=.7590;note=*mobile_element_type: insertion sequence:IS5T EMBL gene 3652182 3653198 . - . ID=.7591;gene=insH1;locus_tag=b3505;gene_synonym=ECK0261;db_xref=EcoGene:EG40008 EMBL CDS 3652182 3653198 . - 0 ID=.7592;gene=insH1;locus_tag=b3505;gene_synonym=ECK0261;function=IS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;codon_start=1;transl_table=11;product=IS5 transposase and trans-activator;protein_id=AAC76530.1;db_xref=GI:1789921;db_xref=ASAP:ABE-0011446;db_xref=UniProtKB/Swiss-Prot:P0CE58;db_xref=EcoGene:EG40008 EMBL gene 3653961 3654527 . + . ID=.7593;gene=slp;locus_tag=b3506;gene_synonym=ECK3490;gene_synonym=JW3474;db_xref=EcoGene:EG11890 EMBL CDS 3653961 3654527 . + 0 ID=.7594;gene=slp;locus_tag=b3506;gene_synonym=ECK3490;gene_synonym=JW3474;function=membrane%3B Outer membrane constituents;note=outer membrane protein induced after carbon starvation%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane%3B GO_process: GO:0042594 - response to starvation;codon_start=1;transl_table=11;product=outer membrane lipoprotein;protein_id=AAC76531.2;db_xref=GI:87082278;db_xref=ASAP:ABE-0011451;db_xref=UniProtKB/Swiss-Prot:P37194;db_xref=EcoGene:EG11890 EMBL gene 3654683 3655213 . + . ID=.7595;gene=dctR;locus_tag=b3507;gene_synonym=ECK3491;gene_synonym=JW3475;gene_synonym=yhiF;db_xref=EcoGene:EG11889 EMBL CDS 3654683 3655213 . + 0 ID=.7596;gene=dctR;locus_tag=b3507;gene_synonym=ECK3491;gene_synonym=JW3475;gene_synonym=yhiF;note=GO_process: GO:0006355 - regulation of transcription%2C DNA-dependent;codon_start=1;transl_table=11;product=Putative LuxR family repressor for dicarboxylate transport;protein_id=AAC76532.1;db_xref=GI:1789923;db_xref=ASAP:ABE-0011454;db_xref=UniProtKB/Swiss-Prot:P37195;db_xref=EcoGene:EG11889 EMBL gene 3655255 3655902 . - . ID=.7597;gene=yhiD;locus_tag=b3508;gene_synonym=ECK3492;gene_synonym=JW5670;gene_synonym=yhhE;db_xref=EcoGene:EG11400 EMBL CDS 3655255 3655902 . - 0 ID=.7598;gene=yhiD;locus_tag=b3508;gene_synonym=ECK3492;gene_synonym=JW5670;gene_synonym=yhhE;function=putative transport%3B Not classified;note=putative transport ATPase;codon_start=1;transl_table=11;product=putative Mg(2+) transport ATPase%2C inner membrane protein;protein_id=AAC76533.1;db_xref=GI:1789924;db_xref=ASAP:ABE-0011456;db_xref=UniProtKB/Swiss-Prot:P0AFV2;db_xref=EcoGene:EG11400 EMBL gene 3655966 3656292 . - . ID=.7599;gene=hdeB;locus_tag=b3509;gene_synonym=ECK3493;gene_synonym=JW5669;gene_synonym=yhhD;gene_synonym=yhiC;db_xref=EcoGene:EG11399 EMBL CDS 3655966 3656292 . - 0 ID=.7600;gene=hdeB;locus_tag=b3509;gene_synonym=ECK3493;gene_synonym=JW5669;gene_synonym=yhhD;gene_synonym=yhiC;codon_start=1;transl_table=11;product=acid-resistance protein;protein_id=AAC76534.2;db_xref=GI:87082279;db_xref=ASAP:ABE-0011458;db_xref=UniProtKB/Swiss-Prot:P0AET2;db_xref=EcoGene:EG11399 EMBL gene 3656408 3656740 . - . ID=.7601;gene=hdeA;locus_tag=b3510;gene_synonym=ECK3494;gene_synonym=JW3478;gene_synonym=yhhC;gene_synonym=yhiB;db_xref=EcoGene:EG11398 EMBL CDS 3656408 3656740 . - 0 ID=.7602;gene=hdeA;locus_tag=b3510;gene_synonym=ECK3494;gene_synonym=JW3478;gene_synonym=yhhC;gene_synonym=yhiB;codon_start=1;transl_table=11;product=stress response protein acid-resistance protein;protein_id=AAC76535.1;db_xref=GI:1789926;db_xref=ASAP:ABE-0011464;db_xref=UniProtKB/Swiss-Prot:P0AES9;db_xref=EcoGene:EG11398 EMBL gene 3656995 3657567 . + . ID=.7603;gene=hdeD;locus_tag=b3511;gene_synonym=ECK3495;gene_synonym=JW3479;gene_synonym=yhiA;db_xref=EcoGene:EG11495 EMBL CDS 3656995 3657567 . + 0 ID=.7604;gene=hdeD;locus_tag=b3511;gene_synonym=ECK3495;gene_synonym=JW3479;gene_synonym=yhiA;codon_start=1;transl_table=11;product=acid-resistance membrane protein;protein_id=AAC76536.1;db_xref=GI:1789927;db_xref=ASAP:ABE-0011467;db_xref=UniProtKB/Swiss-Prot:P0AET5;db_xref=EcoGene:EG11495 EMBL gene 3657986 3658054 . - . ID=.7605;gene=arrS;locus_tag=b4704;gene_synonym=ECK4516;db_xref=EcoGene:EG31188 EMBL ncRNA 3657986 3658054 . - . ID=.7606;ncrna_class=antisense_RNA;gene=arrS;locus_tag=b4704;gene_synonym=ECK4516;product=antisense sRNA ArrS%2C function unknown;db_xref=EcoGene:EG31188 EMBL gene 3658366 3658893 . + . ID=.7607;gene=gadE;locus_tag=b3512;gene_synonym=ECK3496;gene_synonym=JW3480;gene_synonym=yhiE;gene_synonym=yhiT;db_xref=EcoGene:EG11544 EMBL CDS 3658366 3658893 . + 0 ID=.7608;gene=gadE;locus_tag=b3512;gene_synonym=ECK3496;gene_synonym=JW3480;gene_synonym=yhiE;gene_synonym=yhiT;function=regulator%3B Not classified;codon_start=1;transl_table=11;product=gad regulon transcriptional activator;protein_id=AAC76537.1;db_xref=GI:1789928;db_xref=ASAP:ABE-0011475;db_xref=UniProtKB/Swiss-Prot:P63204;db_xref=EcoGene:EG11544 EMBL gene 3659232 3660389 . + . ID=.7609;gene=mdtE;locus_tag=b3513;gene_synonym=ECK3497;gene_synonym=JW3481;gene_synonym=yhiU;db_xref=EcoGene:EG12240 EMBL CDS 3659232 3660389 . + 0 ID=.7610;gene=mdtE;locus_tag=b3513;gene_synonym=ECK3497;gene_synonym=JW3481;gene_synonym=yhiU;function=putative membrane%3B Not classified;note=putative membrane protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=anaerobic multidrug efflux transporter%2C ArcA-regulated;protein_id=AAC76538.1;db_xref=GI:1789929;db_xref=ASAP:ABE-0011478;db_xref=UniProtKB/Swiss-Prot:P37636;db_xref=EcoGene:EG12240 EMBL gene 3660414 3663527 . + . ID=.7611;gene=mdtF;locus_tag=b3514;gene_synonym=ECK3498;gene_synonym=JW3482;gene_synonym=yhiV;db_xref=EcoGene:EG12241 EMBL CDS 3660414 3663527 . + 0 ID=.7612;gene=mdtF;locus_tag=b3514;gene_synonym=ECK3498;gene_synonym=JW3482;gene_synonym=yhiV;function=putative transport%3B Not classified;note=putative transport system permease protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane;codon_start=1;transl_table=11;product=anaerobic multidrug efflux transporter%2C ArcA-regulated;protein_id=AAC76539.1;db_xref=GI:1789930;db_xref=ASAP:ABE-0011480;db_xref=UniProtKB/Swiss-Prot:P37637;db_xref=EcoGene:EG12241 EMBL gene 3663890 3664618 . - . ID=.7613;gene=gadW;locus_tag=b3515;gene_synonym=ECK3499;gene_synonym=JW3483;gene_synonym=yhiW;db_xref=EcoGene:EG12242 EMBL CDS 3663890 3664618 . - 0 ID=.7614;gene=gadW;locus_tag=b3515;gene_synonym=ECK3499;gene_synonym=JW3483;gene_synonym=yhiW;function=putative regulator%3B Not classified;note=putative ARAC-type regulatory protein%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=transcriptional activator of gadA and gadBC%3B repressor of gadX;protein_id=AAC76540.1;db_xref=GI:1789932;db_xref=ASAP:ABE-0011482;db_xref=UniProtKB/Swiss-Prot:P63201;db_xref=EcoGene:EG12242 EMBL gene 3664864 3664968 . + . ID=.7615;gene=gadY;locus_tag=b4452;gene_synonym=ECK3500;gene_synonym=IS183;gene_synonym=JWR0255;db_xref=EcoGene:EG31164 EMBL ncRNA 3664864 3664968 . + . ID=.7616;ncrna_class=antisense_RNA;gene=gadY;locus_tag=b4452;gene_synonym=ECK3500;gene_synonym=IS183;gene_synonym=JWR0255;product=sRNA antisense regulator of gadAB transcriptional activator GadX mRNA%2C Hfq-dependent;note=identified in a large scale screen;db_xref=ASAP:ABE-0047272;db_xref=EcoGene:EG31164 EMBL gene 3664986 3665810 . - . ID=.7617;gene=gadX;locus_tag=b3516;gene_synonym=ECK3501;gene_synonym=JW3484;gene_synonym=yhiX;db_xref=EcoGene:EG12243 EMBL CDS 3664986 3665810 . - 0 ID=.7618;gene=gadX;locus_tag=b3516;gene_synonym=ECK3501;gene_synonym=JW3484;gene_synonym=yhiX;note=GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=acid resistance regulon transcriptional activator%3B autoactivator;protein_id=AAC76541.1;db_xref=GI:1789933;db_xref=ASAP:ABE-0011487;db_xref=UniProtKB/Swiss-Prot:P37639;db_xref=EcoGene:EG12243 EMBL gene 3666180 3667580 . - . ID=.7619;gene=gadA;locus_tag=b3517;gene_synonym=ECK3502;gene_synonym=gadS;gene_synonym=JW3485;db_xref=EcoGene:EG50009 EMBL CDS 3666180 3667580 . - 0 ID=.7620;gene=gadA;locus_tag=b3517;gene_synonym=ECK3502;gene_synonym=gadS;gene_synonym=JW3485;ec_number=4.1.1.15;function=enzyme%3B Central intermediary metabolism: Pool%2C multipurpose conversions;experiment=N-terminus verified by Edman degradation: PMID 1740158%2C7764225%2C8455549%2C10094700;note=glutamate decarboxylase isozyme%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009063 - cellular amino acid catabolic process%3B GO_process: GO:0006520 - cellular amino acid metabolic process;codon_start=1;transl_table=11;product=glutamate decarboxylase A%2C PLP-dependent;protein_id=AAC76542.1;db_xref=GI:1789934;db_xref=ASAP:ABE-0011490;db_xref=UniProtKB/Swiss-Prot:P69908;db_xref=EcoGene:EG50009 EMBL gene 3667791 3669188 . - . ID=.7621;gene=yhjA;locus_tag=b3518;gene_synonym=ECK3503;gene_synonym=JW3486;db_xref=EcoGene:EG12244 EMBL CDS 3667791 3669188 . - 0 ID=.7622;gene=yhjA;locus_tag=b3518;gene_synonym=ECK3503;gene_synonym=JW3486;function=putative enzyme%3B Not classified;note=GO_process: GO:0017004 - cytochrome complex assembly;codon_start=1;transl_table=11;product=putative cytochrome C peroxidase;protein_id=AAC76543.1;db_xref=GI:1789935;db_xref=ASAP:ABE-0011493;db_xref=UniProtKB/Swiss-Prot:P37197;db_xref=EcoGene:EG12244 EMBL gene 3669592 3671241 . + . ID=.7623;gene=treF;locus_tag=b3519;gene_synonym=ECK3504;gene_synonym=JW3487;db_xref=EcoGene:EG12245 EMBL CDS 3669592 3671241 . + 0 ID=.7624;gene=treF;locus_tag=b3519;gene_synonym=ECK3504;gene_synonym=JW3487;ec_number=3.2.1.28;function=enzyme%3B Degradation of small molecules: Carbon compounds;experiment=N-terminus verified by Edman degradation: PMID 8892826;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=cytoplasmic trehalase;protein_id=AAC76544.1;db_xref=GI:1789936;db_xref=ASAP:ABE-0011497;db_xref=UniProtKB/Swiss-Prot:P62601;db_xref=EcoGene:EG12245 EMBL gene 3671292 3671894 . - . ID=.7625;gene=yhjB;locus_tag=b3520;gene_synonym=ECK3505;gene_synonym=JW3488;db_xref=EcoGene:EG12246 EMBL CDS 3671292 3671894 . - 0 ID=.7626;gene=yhjB;locus_tag=b3520;gene_synonym=ECK3505;gene_synonym=JW3488;function=putative regulator%3B Not classified;note=putative regulator%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=putative DNA-binding transcriptional response regulator;protein_id=AAC76545.1;db_xref=GI:1789937;db_xref=ASAP:ABE-0011499;db_xref=UniProtKB/Swiss-Prot:P37640;db_xref=EcoGene:EG12246 EMBL gene 3672414 3673313 . + . ID=.7627;gene=yhjC;locus_tag=b3521;gene_synonym=ECK3506;gene_synonym=JW3489;db_xref=EcoGene:EG12247 EMBL CDS 3672414 3673313 . + 0 ID=.7628;gene=yhjC;locus_tag=b3521;gene_synonym=ECK3506;gene_synonym=JW3489;function=putative regulator%3B Not classified;note=putative transcriptional regulator LYSR-type%3B GO_function: GO:0016563 - transcription activator activity%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=LysR family putative transcriptional regulator;protein_id=AAC76546.2;db_xref=GI:145693193;db_xref=ASAP:ABE-0011503;db_xref=UniProtKB/Swiss-Prot:P37641;db_xref=EcoGene:EG12247 EMBL gene 3673362 3674375 . + . ID=.7629;gene=yhjD;locus_tag=b3522;gene_synonym=ECK3507;gene_synonym=JW3490;db_xref=EcoGene:EG12248 EMBL CDS 3673362 3674375 . + 0 ID=.7630;gene=yhjD;locus_tag=b3522;gene_synonym=ECK3507;gene_synonym=JW3490;codon_start=1;transl_table=11;product=inner membrane putative BrbK family alternate lipid exporter;protein_id=AAC76547.1;db_xref=GI:1789939;db_xref=ASAP:ABE-0011505;db_xref=UniProtKB/Swiss-Prot:P37642;db_xref=EcoGene:EG12248 EMBL repeat_region 3674381 3674473 . + . ID=.7631;note=REP263 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 3674786 3676108 . + . ID=.7632;gene=yhjE;locus_tag=b3523;gene_synonym=ECK3508;gene_synonym=JW3491;db_xref=EcoGene:EG12249 EMBL CDS 3674786 3676108 . + 0 ID=.7633;gene=yhjE;locus_tag=b3523;gene_synonym=ECK3508;gene_synonym=JW3491;function=putative transport%3B Not classified;note=putative transport protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative MFS transporter%3B membrane protein;protein_id=AAC76548.1;db_xref=GI:1789941;db_xref=ASAP:ABE-0011509;db_xref=UniProtKB/Swiss-Prot:P37643;db_xref=EcoGene:EG12249 EMBL repeat_region 3676121 3676281 . + . ID=.7634;note=RIP264 (repetitive extragenic palindromic) element%3B contains 3 REP sequences and 1 IHF site EMBL gene 3676290 3678350 . - . ID=.7635;gene=yhjG;locus_tag=b3524;gene_synonym=ECK3509;gene_synonym=JW3492;gene_synonym=yhjF;db_xref=EcoGene:EG12251 EMBL CDS 3676290 3678350 . - 0 ID=.7636;gene=yhjG;locus_tag=b3524;gene_synonym=ECK3509;gene_synonym=JW3492;gene_synonym=yhjF;codon_start=1;transl_table=11;product=putative inner membrane-anchored periplasmic AsmA family protein;protein_id=AAC76549.2;db_xref=GI:226510981;db_xref=ASAP:ABE-0011512;db_xref=UniProtKB/Swiss-Prot:P37645;db_xref=EcoGene:EG12251 EMBL gene 3678420 3679187 . - . ID=.7637;gene=yhjH;locus_tag=b3525;gene_synonym=ECK3510;gene_synonym=JW3493;db_xref=EcoGene:EG12252 EMBL CDS 3678420 3679187 . - 0 ID=.7638;gene=yhjH;locus_tag=b3525;gene_synonym=ECK3510;gene_synonym=JW3493;codon_start=1;transl_table=11;product=cyclic-di-GMP phosphodiesterase%2C FlhDC-regulated;protein_id=AAC76550.2;db_xref=GI:87082280;db_xref=ASAP:ABE-0011515;db_xref=UniProtKB/Swiss-Prot:P37646;db_xref=EcoGene:EG12252 EMBL gene 3679419 3680348 . + . ID=.7639;gene=kdgK;locus_tag=b3526;gene_synonym=ECK3511;gene_synonym=JW5668;gene_synonym=yhjI;db_xref=EcoGene:EG12253 EMBL CDS 3679419 3680348 . + 0 ID=.7640;gene=kdgK;locus_tag=b3526;gene_synonym=ECK3511;gene_synonym=JW5668;gene_synonym=yhjI;ec_number=2.7.1.45;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=2-dehydro-3-deoxygluconokinase;protein_id=AAC76551.2;db_xref=GI:87082281;db_xref=ASAP:ABE-0011519;db_xref=UniProtKB/Swiss-Prot:P37647;db_xref=EcoGene:EG12253 EMBL repeat_region 3680367 3680442 . + . ID=.7641;note=REP265 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 3680444 3681940 . - . ID=.7642;gene=yhjJ;locus_tag=b3527;gene_synonym=ECK3512;gene_synonym=JW3495;db_xref=EcoGene:EG12254 EMBL CDS 3680444 3681940 . - 0 ID=.7643;gene=yhjJ;locus_tag=b3527;gene_synonym=ECK3512;gene_synonym=JW3495;codon_start=1;transl_table=11;product=putative periplasmic M16 family chaperone;protein_id=AAC76552.1;db_xref=GI:1789946;db_xref=ASAP:ABE-0011524;db_xref=UniProtKB/Swiss-Prot:P37648;db_xref=EcoGene:EG12254 EMBL gene 3682161 3683447 . - . ID=.7644;gene=dctA;locus_tag=b3528;gene_synonym=ECK3513;gene_synonym=JW3496;gene_synonym=out;db_xref=EcoGene:EG20044 EMBL CDS 3682161 3683447 . - 0 ID=.7645;gene=dctA;locus_tag=b3528;gene_synonym=ECK3513;gene_synonym=JW3496;gene_synonym=out;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=uptake of C4-dicarboxylic acids%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_function: GO:0005311 - sodium:dicarboxylate/tricarboxylate symporter activity%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=C4-dicarboxylic acid%2C orotate and citrate transporter;protein_id=AAC76553.1;db_xref=GI:1789947;db_xref=ASAP:ABE-0011527;db_xref=UniProtKB/Swiss-Prot:P0A830;db_xref=EcoGene:EG20044 EMBL gene 3683630 3685618 . - . ID=.7646;gene=yhjK;locus_tag=b3529;gene_synonym=ECK3514;gene_synonym=JW5943;db_xref=EcoGene:EG12256 EMBL CDS 3683630 3685618 . - 0 ID=.7647;gene=yhjK;locus_tag=b3529;gene_synonym=ECK3514;gene_synonym=JW5943;codon_start=1;transl_table=11;product=cyclic-di-GMP phosphodiesterase;protein_id=AAC76554.4;db_xref=GI:226510982;db_xref=ASAP:ABE-0011533;db_xref=UniProtKB/Swiss-Prot:P37649;db_xref=EcoGene:EG12256 EMBL gene 3685700 3689173 . - . ID=.7648;gene=bcsC;locus_tag=b3530;gene_synonym=ECK3515;gene_synonym=JW5942;gene_synonym=yhjL;db_xref=EcoGene:EG12257 EMBL CDS 3685700 3689173 . - 0 ID=.7649;gene=bcsC;locus_tag=b3530;gene_synonym=ECK3515;gene_synonym=JW5942;gene_synonym=yhjL;function=putative enzyme%3B Not classified;note=putative oxidoreductase subunit;codon_start=1;transl_table=11;product=cellulose synthase subunit;protein_id=AAT48188.4;db_xref=GI:226510983;db_xref=ASAP:ABE-0011538;db_xref=UniProtKB/Swiss-Prot:P37650;db_xref=EcoGene:EG12257 EMBL gene 3689155 3690261 . - . ID=.7650;gene=bcsZ;locus_tag=b3531;gene_synonym=bcsC;gene_synonym=ECK3516;gene_synonym=JW3499;gene_synonym=yhjM;db_xref=EcoGene:EG12258 EMBL CDS 3689155 3690261 . - 0 ID=.7651;gene=bcsZ;locus_tag=b3531;gene_synonym=bcsC;gene_synonym=ECK3516;gene_synonym=JW3499;gene_synonym=yhjM;ec_number=3.2.1.4;note=GO_component: GO:0005576 - extracellular region%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0000272 - polysaccharide catabolic process;codon_start=1;transl_table=11;product=endo-1%2C4-D-glucanase;protein_id=AAC76556.1;db_xref=GI:1789951;db_xref=ASAP:ABE-0011541;db_xref=UniProtKB/Swiss-Prot:P37651;db_xref=EcoGene:EG12258 EMBL gene 3690268 3692607 . - . ID=.7652;gene=bcsB;locus_tag=b3532;gene_synonym=ECK3517;gene_synonym=JW3500;gene_synonym=yhjN;db_xref=EcoGene:EG12259 EMBL CDS 3690268 3692607 . - 0 ID=.7653;gene=bcsB;locus_tag=b3532;gene_synonym=ECK3517;gene_synonym=JW3500;gene_synonym=yhjN;codon_start=1;transl_table=11;product=regulator of cellulose synthase%2C cyclic di-GMP binding;protein_id=AAC76557.1;db_xref=GI:1789952;db_xref=ASAP:ABE-0011545;db_xref=UniProtKB/Swiss-Prot:P37652;db_xref=EcoGene:EG12259 EMBL gene 3692618 3695236 . - . ID=.7654;gene=bcsA;locus_tag=b3533;gene_synonym=ECK3518;gene_synonym=JW5665;gene_synonym=yhjO;gene_synonym=yhjP;db_xref=EcoGene:EG12260 EMBL CDS 3692618 3695236 . - 0 ID=.7655;gene=bcsA;locus_tag=b3533;gene_synonym=ECK3518;gene_synonym=JW5665;gene_synonym=yhjO;gene_synonym=yhjP;ec_number=2.4.1.12;function=putative enzyme%3B Not classified;note=putative cellulose synthase;codon_start=1;transl_table=11;product=cellulose synthase%2C catalytic subunit;protein_id=AAC76558.2;db_xref=GI:87082284;db_xref=ASAP:ABE-0011547;db_xref=UniProtKB/Swiss-Prot:P37653;db_xref=EcoGene:EG12260 EMBL gene 3695233 3695985 . - . ID=.7656;gene=bcsQ;locus_tag=b3534;gene_synonym=ECK3519;gene_synonym=JW5941;gene_synonym=yhjQ;pseudo=true;db_xref=EcoGene:EG12261 EMBL CDS 3695233 3695985 . - 0 ID=.7657;gene=bcsQ;locus_tag=b3534;gene_synonym=ECK3519;gene_synonym=JW5941;gene_synonym=yhjQ;note=involved in cellulose production%2C minD superfamily (pseudogene);pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0011549;db_xref=UniProtKB/Swiss-Prot:P37655;db_xref=EcoGene:EG12261 EMBL gene 3695997 3696185 . - . ID=.7658;gene=yhjR;locus_tag=b3535;gene_synonym=ECK3520;gene_synonym=JW3503;db_xref=EcoGene:EG12262 EMBL CDS 3695997 3696185 . - 0 ID=.7659;gene=yhjR;locus_tag=b3535;gene_synonym=ECK3520;gene_synonym=JW3503;codon_start=1;transl_table=11;product=DUF2629 family protein;protein_id=AAC76560.1;db_xref=GI:1789956;db_xref=ASAP:ABE-0011551;db_xref=UniProtKB/Swiss-Prot:P0ADJ3;db_xref=EcoGene:EG12262 EMBL gene 3696458 3698029 . + . ID=.7660;gene=bcsE;locus_tag=b3536;gene_synonym=ECK3521;gene_synonym=JW3504;gene_synonym=yhjS;db_xref=EcoGene:EG12263 EMBL CDS 3696458 3698029 . + 0 ID=.7661;gene=bcsE;locus_tag=b3536;gene_synonym=ECK3521;gene_synonym=JW3504;gene_synonym=yhjS;note=conserved hypothetical protein%3B Salmonella ortholog implicated in the biosynthesis of cellulose%2C although the precise role remains unclear;codon_start=1;transl_table=11;product=cellulose production protein;protein_id=AAC76561.1;db_xref=GI:1789958;db_xref=ASAP:ABE-0011554;db_xref=UniProtKB/Swiss-Prot:P37657;db_xref=EcoGene:EG12263 EMBL gene 3698026 3698217 . + . ID=.7662;gene=bcsF;locus_tag=b3537;gene_synonym=ECK3522;gene_synonym=JW5663;gene_synonym=yhjT;db_xref=EcoGene:EG12264 EMBL CDS 3698026 3698217 . + 0 ID=.7663;gene=bcsF;locus_tag=b3537;gene_synonym=ECK3522;gene_synonym=JW5663;gene_synonym=yhjT;codon_start=1;transl_table=11;product=DUF2636 family cellulose production small membrane protein;protein_id=AAC76562.2;db_xref=GI:87082285;db_xref=ASAP:ABE-0011556;db_xref=UniProtKB/Swiss-Prot:P0ADJ5;db_xref=EcoGene:EG12264 EMBL gene 3698214 3699893 . + . ID=.7664;gene=bcsG;locus_tag=b3538;gene_synonym=ECK3523;gene_synonym=JW3506;gene_synonym=yhjU;db_xref=EcoGene:EG12265 EMBL CDS 3698214 3699893 . + 0 ID=.7665;gene=bcsG;locus_tag=b3538;gene_synonym=ECK3523;gene_synonym=JW3506;gene_synonym=yhjU;codon_start=1;transl_table=11;product=DUF3260 family cellulose production inner membrane protein;protein_id=AAC76563.1;db_xref=GI:1789960;db_xref=ASAP:ABE-0011558;db_xref=UniProtKB/Swiss-Prot:P37659;db_xref=EcoGene:EG12265 EMBL gene 3699980 3700087 . - . ID=.7666;gene=ldrD;locus_tag=b4453;gene_synonym=ECK3524;gene_synonym=JW5966;db_xref=EcoGene:EG14406 EMBL CDS 3699980 3700087 . - 0 ID=.7667;gene=ldrD;locus_tag=b4453;gene_synonym=ECK3524;gene_synonym=JW5966;note=small toxic polypeptide;codon_start=1;transl_table=11;product=toxic polypeptide%2C small;protein_id=AAT48189.1;db_xref=GI:48994945;db_xref=ASAP:ABE-0047284;db_xref=UniProtKB/Swiss-Prot:Q6BF25;db_xref=EcoGene:EG14406 EMBL gene 3700136 3700201 . + . ID=.7668;gene=rdlD;locus_tag=b4454;gene_synonym=ECK3525;gene_synonym=JWR0256;db_xref=EcoGene:EG31142 EMBL ncRNA 3700136 3700201 . + . ID=.7669;ncrna_class=antisense_RNA;gene=rdlD;locus_tag=b4454;gene_synonym=ECK3525;gene_synonym=JWR0256;product=sRNA antisense regulator affects LdrD translation%3B proposed addiction module in LDR-D repeat%2C with toxic peptide LdrD;note=antisense RNA%2C trans-acting regulator of ldrD translation;function=component of addiction module;db_xref=ASAP:ABE-0047273;db_xref=EcoGene:EG31142 EMBL gene 3700563 3701834 . + . ID=.7670;gene=yhjV;locus_tag=b3539;gene_synonym=ECK3526;gene_synonym=JW3508;db_xref=EcoGene:EG12266 EMBL CDS 3700563 3701834 . + 0 ID=.7671;gene=yhjV;locus_tag=b3539;gene_synonym=ECK3526;gene_synonym=JW3508;function=putative transport%3B Not classified;note=putative transporter protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative transporter;protein_id=AAC76564.1;db_xref=GI:1789961;db_xref=ASAP:ABE-0011562;db_xref=UniProtKB/Swiss-Prot:P37660;db_xref=EcoGene:EG12266 EMBL gene 3701864 3702868 . - . ID=.7672;gene=dppF;locus_tag=b3540;gene_synonym=ECK3527;gene_synonym=JW3509;db_xref=EcoGene:EG12628 EMBL CDS 3701864 3702868 . - 0 ID=.7673;gene=dppF;locus_tag=b3540;gene_synonym=ECK3527;gene_synonym=JW3509;function=transport%3B Not classified;note=putative ATP-binding component of dipeptide transport system%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009063 - cellular amino acid catabolic process;codon_start=1;transl_table=11;product=dipeptide/heme ABC transporter ATPas;protein_id=AAC76565.1;db_xref=GI:1789962;db_xref=ASAP:ABE-0011564;db_xref=UniProtKB/Swiss-Prot:P37313;db_xref=EcoGene:EG12628 EMBL gene 3702865 3703848 . - . ID=.7674;gene=dppD;locus_tag=b3541;gene_synonym=ECK3528;gene_synonym=JW3510;db_xref=EcoGene:EG12627 EMBL CDS 3702865 3703848 . - 0 ID=.7675;gene=dppD;locus_tag=b3541;gene_synonym=ECK3528;gene_synonym=JW3510;function=transport%3B Not classified;note=putative ATP-binding component of dipeptide transport system%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009063 - cellular amino acid catabolic process;codon_start=1;transl_table=11;product=dipeptide/heme ABC transporter ATPas;protein_id=AAC76566.1;db_xref=GI:1789963;db_xref=ASAP:ABE-0011566;db_xref=UniProtKB/Swiss-Prot:P0AAG0;db_xref=EcoGene:EG12627 EMBL gene 3703859 3704761 . - . ID=.7676;gene=dppC;locus_tag=b3542;gene_synonym=ECK3529;gene_synonym=JW3511;db_xref=EcoGene:EG12626 EMBL CDS 3703859 3704761 . - 0 ID=.7677;gene=dppC;locus_tag=b3542;gene_synonym=ECK3529;gene_synonym=JW3511;function=transport%3B Not classified;note=dipeptide transport system permease protein 2%3B membrane component of ABC superfamily%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=dipeptide/heme ABC transporter permease;protein_id=AAC76567.1;db_xref=GI:1789964;db_xref=ASAP:ABE-0011570;db_xref=UniProtKB/Swiss-Prot:P0AEG1;db_xref=EcoGene:EG12626 EMBL gene 3704771 3705790 . - . ID=.7678;gene=dppB;locus_tag=b3543;gene_synonym=ECK3530;gene_synonym=JW3512;db_xref=EcoGene:EG12625 EMBL CDS 3704771 3705790 . - 0 ID=.7679;gene=dppB;locus_tag=b3543;gene_synonym=ECK3530;gene_synonym=JW3512;function=transport%3B Not classified;note=dipeptide transport system permease protein 1%3B membrane component of ABC superfamily%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=dipeptide/heme ABC transporter permease;protein_id=AAC76568.1;db_xref=GI:1789965;db_xref=ASAP:ABE-0011572;db_xref=UniProtKB/Swiss-Prot:P0AEF8;db_xref=EcoGene:EG12625 EMBL repeat_region 3705963 3706060 . + . ID=.7680;note=RIP266 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 3706098 3707705 . - . ID=.7681;gene=dppA;locus_tag=b3544;gene_synonym=alu;gene_synonym=dpp;gene_synonym=ECK3531;gene_synonym=fpp;gene_synonym=JW3513;db_xref=EcoGene:EG10248 EMBL CDS 3706098 3707705 . - 0 ID=.7682;gene=dppA;locus_tag=b3544;gene_synonym=alu;gene_synonym=dpp;gene_synonym=ECK3531;gene_synonym=fpp;gene_synonym=JW3513;function=transport%3B Not classified;note=dipeptide transport protein%3B periplasmic-binding component of ABC superfamily%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0009063 - cellular amino acid catabolic process;codon_start=1;transl_table=11;product=dipeptide/heme ABC transporter periplasmic binding protein%3B dipeptide chemotaxis receptor;protein_id=AAC76569.1;db_xref=GI:1789966;db_xref=ASAP:ABE-0011576;db_xref=UniProtKB/Swiss-Prot:P23847;db_xref=EcoGene:EG10248 EMBL repeat_region 3708272 3708357 . + . ID=.7683;note=REP267 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 3708616 3708692 . - . ID=.7684;gene=proK;locus_tag=b3545;gene_synonym=ECK3532;gene_synonym=JWR0080;gene_synonym=proV;db_xref=EcoGene:EG30066 EMBL tRNA 3708616 3708692 . - . ID=.7685;gene=proK;locus_tag=b3545;gene_synonym=ECK3532;gene_synonym=JWR0080;gene_synonym=proV;product=tRNA-Pro;note=anticodon: CGG%3B proline tRNA1;db_xref=ASAP:ABE-0011579;db_xref=EcoGene:EG30066 EMBL gene 3708784 3710475 . - . ID=.7686;gene=eptB;locus_tag=b3546;gene_synonym=ECK3533;gene_synonym=JW5660;gene_synonym=pagC;gene_synonym=yhjW;db_xref=EcoGene:EG12267 EMBL CDS 3708784 3710475 . - 0 ID=.7687;gene=eptB;locus_tag=b3546;gene_synonym=ECK3533;gene_synonym=JW5660;gene_synonym=pagC;gene_synonym=yhjW;note=GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=KDO phosphoethanolamine transferase%2C Ca(2+)-inducible;protein_id=AAC76570.2;db_xref=GI:87082286;db_xref=ASAP:ABE-0011581;db_xref=UniProtKB/Swiss-Prot:P37661;db_xref=EcoGene:EG12267 EMBL gene 3710799 3712007 . - . ID=.7688;gene=yhjX;locus_tag=b3547;gene_synonym=ECK3534;gene_synonym=JW3516;gene_synonym=oxlT;db_xref=EcoGene:EG12268 EMBL CDS 3710799 3712007 . - 0 ID=.7689;gene=yhjX;locus_tag=b3547;gene_synonym=ECK3534;gene_synonym=JW3516;gene_synonym=oxlT;function=putative transport%3B Drug/analog sensitivity;note=putative resistance protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=pyruvate-inducible inner membrane protein%2C putative transporter;protein_id=AAC76571.1;db_xref=GI:1789969;db_xref=ASAP:ABE-0011586;db_xref=UniProtKB/Swiss-Prot:P37662;db_xref=EcoGene:EG12268 EMBL gene 3712236 3712934 . - . ID=.7690;gene=yhjY;locus_tag=b3548;gene_synonym=ECK3535;gene_synonym=JW5659;db_xref=EcoGene:EG12269 EMBL CDS 3712236 3712934 . - 0 ID=.7691;gene=yhjY;locus_tag=b3548;gene_synonym=ECK3535;gene_synonym=JW5659;function=putative enzyme%3B Not classified;note=putative lipase%3B GO_process: GO:0019395 - fatty acid oxidation;codon_start=1;transl_table=11;product=autotransporter beta-domain protein;protein_id=AAC76572.2;db_xref=GI:87082287;db_xref=ASAP:ABE-0011589;db_xref=UniProtKB/Swiss-Prot:P37663;db_xref=EcoGene:EG12269 EMBL gene 3713092 3713655 . + . ID=.7692;gene=tag;locus_tag=b3549;gene_synonym=ECK3536;gene_synonym=JW3518;gene_synonym=tagA;db_xref=EcoGene:EG10986 EMBL CDS 3713092 3713655 . + 0 ID=.7693;gene=tag;locus_tag=b3549;gene_synonym=ECK3536;gene_synonym=JW3518;gene_synonym=tagA;ec_number=3.2.2.20;function=enzyme%3B DNA - replication%2C repair%2C restriction/modification;experiment=N-terminus verified by Edman degradation: PMID 3536912;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006281 - DNA repair;codon_start=1;transl_table=11;product=3-methyl-adenine DNA glycosylase I%2C constitutive;protein_id=AAC76573.1;db_xref=GI:1789971;db_xref=ASAP:ABE-0011593;db_xref=UniProtKB/Swiss-Prot:P05100;db_xref=EcoGene:EG10986 EMBL gene 3713652 3714092 . + . ID=.7694;gene=yiaC;locus_tag=b3550;gene_synonym=ECK3537;gene_synonym=JW3519;db_xref=EcoGene:EG12270 EMBL CDS 3713652 3714092 . + 0 ID=.7695;gene=yiaC;locus_tag=b3550;gene_synonym=ECK3537;gene_synonym=JW3519;codon_start=1;transl_table=11;product=GNAT family putative N-acetyltransferase;protein_id=AAC76574.1;db_xref=GI:1789972;db_xref=ASAP:ABE-0011595;db_xref=UniProtKB/Swiss-Prot:P37664;db_xref=EcoGene:EG12270 EMBL gene 3714061 3716394 . - . ID=.7696;gene=bisC;locus_tag=b3551;gene_synonym=ECK3538;gene_synonym=JW5940;db_xref=EcoGene:EG10124 EMBL CDS 3714061 3716394 . - 0 ID=.7697;gene=bisC;locus_tag=b3551;gene_synonym=ECK3538;gene_synonym=JW5940;ec_number=1.-.-.-;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Biotin;note=GO_process: GO:0009102 - biotin biosynthetic process;codon_start=1;transl_table=11;product=biotin sulfoxide reductase;protein_id=AAC76575.3;db_xref=GI:145693196;db_xref=ASAP:ABE-0011597;db_xref=UniProtKB/Swiss-Prot:P20099;db_xref=EcoGene:EG10124 EMBL gene 3716547 3717206 . + . ID=.7698;gene=yiaD;locus_tag=b3552;gene_synonym=ECK3539;gene_synonym=JW5657;db_xref=EcoGene:EG12271 EMBL CDS 3716547 3717206 . + 0 ID=.7699;gene=yiaD;locus_tag=b3552;gene_synonym=ECK3539;gene_synonym=JW5657;function=putative membrane%3B Not classified;note=putative outer membrane protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=multicopy suppressor of bamB%3B outer membrane lipoprotein;protein_id=AAT48190.1;db_xref=GI:48994946;db_xref=ASAP:ABE-0011601;db_xref=UniProtKB/Swiss-Prot:P37665;db_xref=EcoGene:EG12271 EMBL gene 3717310 3718284 . + . ID=.7700;gene=ghrB;locus_tag=b3553;gene_synonym=ECK3540;gene_synonym=JW5656;gene_synonym=tkrA;gene_synonym=yiaE;db_xref=EcoGene:EG12272 EMBL CDS 3717310 3718284 . + 0 ID=.7701;gene=ghrB;locus_tag=b3553;gene_synonym=ECK3540;gene_synonym=JW5656;gene_synonym=tkrA;gene_synonym=yiaE;ec_number=1.1.1.215;ec_number=1.1.1.79;experiment=N-terminus verified by Edman degradation: PMID 9298646%2C12639950;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=glyoxylate/hydroxypyruvate reductase B;protein_id=AAC76577.2;db_xref=GI:87082289;db_xref=ASAP:ABE-0011604;db_xref=UniProtKB/Swiss-Prot:P37666;db_xref=EcoGene:EG12272 EMBL gene 3718334 3719044 . - . ID=.7702;gene=yiaF;locus_tag=b3554;gene_synonym=ECK3541;gene_synonym=JW5655;db_xref=EcoGene:EG12273 EMBL CDS 3718334 3719044 . - 0 ID=.7703;gene=yiaF;locus_tag=b3554;gene_synonym=ECK3541;gene_synonym=JW5655;codon_start=1;transl_table=11;product=barrier effect co-colonization resistance factor%3B DUF3053 family lipoprotein;protein_id=AAC76578.2;db_xref=GI:87082290;db_xref=ASAP:ABE-0011606;db_xref=UniProtKB/Swiss-Prot:P0ADK0;db_xref=EcoGene:EG12273 EMBL gene 3719478 3719768 . + . ID=.7704;gene=yiaG;locus_tag=b3555;gene_synonym=ECK3542;gene_synonym=JW3524;db_xref=EcoGene:EG12624 EMBL CDS 3719478 3719768 . + 0 ID=.7705;gene=yiaG;locus_tag=b3555;gene_synonym=ECK3542;gene_synonym=JW3524;note=GO_process: GO:0006355 - regulation of transcription%2C DNA-dependent;codon_start=1;transl_table=11;product=HTH_CROC1 family putative transcriptional regulator;protein_id=AAC76579.1;db_xref=GI:1789978;db_xref=ASAP:ABE-0011612;db_xref=UniProtKB/Swiss-Prot:P0A9V5;db_xref=EcoGene:EG12624 EMBL gene 3720049 3720261 . + . ID=.7706;gene=cspA;locus_tag=b3556;gene_synonym=ECK3543;gene_synonym=JW3525;db_xref=EcoGene:EG10166 EMBL CDS 3720049 3720261 . + 0 ID=.7707;gene=cspA;locus_tag=b3556;gene_synonym=ECK3543;gene_synonym=JW3525;function=regulator%3B Adaptations%2C atypical conditions;note=cold shock protein 7.4%2C transcriptional activator of hns%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0006350 - transcription%3B GO_process: GO:0009266 - response to temperature stimulus;codon_start=1;transl_table=11;product=RNA chaperone and antiterminator%2C cold-inducible;protein_id=AAC76580.1;db_xref=GI:1789979;db_xref=ASAP:ABE-0011616;db_xref=UniProtKB/Swiss-Prot:P0A9X9;db_xref=EcoGene:EG10166 EMBL gene 3720448 3720632 . - . ID=.7708;gene=mokA;locus_tag=b4647;gene_synonym=ECK4448;pseudo=true;db_xref=EcoGene:EG14436 EMBL CDS 3720448 3720632 . - 0 ID=.7709;gene=mokA;locus_tag=b4647;gene_synonym=ECK4448;note=pseudogene%2C overlapping regulatory peptide%2C enables hokB%3B completely contained in another CDS;pseudo=true;codon_start=1;transl_table=11;db_xref=EcoGene:EG14436 EMBL gene 3720448 3720600 . - . ID=.7710;gene=hokA;locus_tag=b4455;gene_synonym=ECK3544;gene_synonym=JW3526;gene_synonym=yiaZ;db_xref=EcoGene:EG12346 EMBL CDS 3720448 3720600 . - 0 ID=.7711;gene=hokA;locus_tag=b4455;gene_synonym=ECK3544;gene_synonym=JW3526;gene_synonym=yiaZ;function=component of addiction module (incomplete);note=small toxic membrane polypeptide%3B IS150 insertion and apparent 39 bp deletion disrupt the associated mokA and sokA genes%3B completely contained in another CDS;codon_start=1;transl_table=11;product=toxic polypeptide%2C small;protein_id=AAT48191.1;db_xref=GI:48994947;db_xref=ASAP:ABE-0047285;db_xref=UniProtKB/Swiss-Prot:P37305;db_xref=EcoGene:EG12346 EMBL sequence_feature 3720633 3722075 . + . ID=.7712;note=*mobile_element_type: insertion sequence:IS150 EMBL gene 3720680 3721201 . + . ID=.7713;gene=insJ;locus_tag=b3557;gene_synonym=ECK3545;db_xref=EcoGene:EG40010 EMBL CDS 3720680 3721201 . + 0 ID=.7714;gene=insJ;locus_tag=b3557;gene_synonym=ECK3545;function=IS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;codon_start=1;transl_table=11;product=IS150 transposase A;protein_id=AAC76581.1;db_xref=GI:1789980;db_xref=ASAP:ABE-0011620;db_xref=UniProtKB/Swiss-Prot:P19768;db_xref=EcoGene:EG40010 EMBL gene 3721198 3722049 . + . ID=.7715;gene=insK;locus_tag=b3558;gene_synonym=dinS;gene_synonym=ECK3546;db_xref=EcoGene:EG40011 EMBL CDS 3721198 3722049 . + 0 ID=.7716;gene=insK;locus_tag=b3558;gene_synonym=dinS;gene_synonym=ECK3546;function=IS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;codon_start=1;transl_table=11;product=IS150 transposase B;protein_id=AAC76582.1;db_xref=GI:1789981;db_xref=ASAP:ABE-0011622;db_xref=UniProtKB/Swiss-Prot:P19769;db_xref=EcoGene:EG40011 EMBL gene 3722076 3722105 . + . ID=.7717;gene=sokA;locus_tag=b4614;gene_synonym=ECK4423;pseudo=true;db_xref=EcoGene:EG31176 EMBL ncRNA 3722076 3722105 . + . ID=.7718;ncrna_class=other;gene=sokA;locus_tag=b4614;gene_synonym=ECK4423;note=pseudogene%2C sRNA antisense regulator blocking mokA/hokA translation;pseudo=true;db_xref=EcoGene:EG31176 EMBL gene 3722328 3724397 . - . ID=.7719;gene=glyS;locus_tag=b3559;gene_synonym=ECK3547;gene_synonym=gly-act;gene_synonym=JW3530;db_xref=EcoGene:EG10410 EMBL CDS 3722328 3724397 . - 0 ID=.7720;gene=glyS;locus_tag=b3559;gene_synonym=ECK3547;gene_synonym=gly-act;gene_synonym=JW3530;ec_number=6.1.1.14;function=enzyme%3B Aminoacyl tRNA synthetases%2C tRNA modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006418 - tRNA aminoacylation for protein translation;codon_start=1;transl_table=11;product=glycine tRNA synthetase%2C beta subunit;protein_id=AAC76583.1;db_xref=GI:1789982;db_xref=ASAP:ABE-0011624;db_xref=UniProtKB/Swiss-Prot:P00961;db_xref=EcoGene:EG10410 EMBL gene 3724407 3725318 . - . ID=.7721;gene=glyQ;locus_tag=b3560;gene_synonym=cfcA;gene_synonym=ECK3548;gene_synonym=glyS;gene_synonym=JW3531;db_xref=EcoGene:EG10409 EMBL CDS 3724407 3725318 . - 0 ID=.7722;gene=glyQ;locus_tag=b3560;gene_synonym=cfcA;gene_synonym=ECK3548;gene_synonym=glyS;gene_synonym=JW3531;ec_number=6.1.1.14;function=enzyme%3B Aminoacyl tRNA synthetases%2C tRNA modification;experiment=N-terminus verified by Edman degradation: PMID 6290471;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006418 - tRNA aminoacylation for protein translation;codon_start=1;transl_table=11;product=glycine tRNA synthetase%2C alpha subunit;protein_id=AAC76584.1;db_xref=GI:1789983;db_xref=ASAP:ABE-0011626;db_xref=UniProtKB/Swiss-Prot:P00960;db_xref=EcoGene:EG10409 EMBL gene 3725413 3725712 . - . ID=.7723;gene=ysaB;locus_tag=b4553;gene_synonym=ECK3549;gene_synonym=JW3532;db_xref=EcoGene:EG14400 EMBL CDS 3725413 3725712 . - 0 ID=.7724;gene=ysaB;locus_tag=b4553;gene_synonym=ECK3549;gene_synonym=JW3532;note=GO_component: GO:0009279 - cell outer membrane;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=ABD18703.1;db_xref=GI:87082291;db_xref=ASAP:ABE-0285074;db_xref=UniProtKB/Swiss-Prot:Q2M7M3;db_xref=EcoGene:EG14400 EMBL gene 3725887 3726882 . + . ID=.7725;gene=wecH;locus_tag=b3561;gene_synonym=ECK3550;gene_synonym=JW3533;gene_synonym=yiaH;db_xref=EcoGene:EG12274 EMBL CDS 3725887 3726882 . + 0 ID=.7726;gene=wecH;locus_tag=b3561;gene_synonym=ECK3550;gene_synonym=JW3533;gene_synonym=yiaH;codon_start=1;transl_table=11;product=O-acetyltransferase for enterobacterial common antigen (ECA);protein_id=AAC76585.1;db_xref=GI:1789984;db_xref=ASAP:ABE-0011630;db_xref=UniProtKB/Swiss-Prot:P37669;db_xref=EcoGene:EG12274 EMBL gene 3726924 3727361 . - . ID=.7727;gene=yiaA;locus_tag=b3562;gene_synonym=ECK3551;gene_synonym=JW3534;db_xref=EcoGene:EG11186 EMBL CDS 3726924 3727361 . - 0 ID=.7728;gene=yiaA;locus_tag=b3562;gene_synonym=ECK3551;gene_synonym=JW3534;note=GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=YiaAB family inner membrane protein%2C tandem domains;protein_id=AAC76586.2;db_xref=GI:87082292;db_xref=ASAP:ABE-0011632;db_xref=UniProtKB/Swiss-Prot:P0ADJ8;db_xref=EcoGene:EG11186 EMBL gene 3727407 3727748 . - . ID=.7729;gene=yiaB;locus_tag=b3563;gene_synonym=ECK3552;gene_synonym=JW5654;db_xref=EcoGene:EG11267 EMBL CDS 3727407 3727748 . - 0 ID=.7730;gene=yiaB;locus_tag=b3563;gene_synonym=ECK3552;gene_synonym=JW5654;codon_start=1;transl_table=11;product=YiaAB family inner membrane protein;protein_id=AAC76587.2;db_xref=GI:87082293;db_xref=ASAP:ABE-0011634;db_xref=UniProtKB/Swiss-Prot:P11286;db_xref=EcoGene:EG11267 EMBL gene 3727917 3729371 . - . ID=.7731;gene=xylB;locus_tag=b3564;gene_synonym=ECK3553;gene_synonym=JW3536;db_xref=EcoGene:EG11075 EMBL CDS 3727917 3729371 . - 0 ID=.7732;gene=xylB;locus_tag=b3564;gene_synonym=ECK3553;gene_synonym=JW3536;ec_number=2.7.1.17;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=xylulokinase;protein_id=AAC76588.1;db_xref=GI:1789987;db_xref=ASAP:ABE-0011637;db_xref=UniProtKB/Swiss-Prot:P09099;db_xref=EcoGene:EG11075 EMBL gene 3729443 3730765 . - . ID=.7733;gene=xylA;locus_tag=b3565;gene_synonym=ECK3554;gene_synonym=JW3537;db_xref=EcoGene:EG11074 EMBL CDS 3729443 3730765 . - 0 ID=.7734;gene=xylA;locus_tag=b3565;gene_synonym=ECK3554;gene_synonym=JW3537;ec_number=5.3.1.5;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0006006 - glucose metabolic process;codon_start=1;transl_table=11;product=D-xylose isomerase;protein_id=AAC76589.1;db_xref=GI:1789988;db_xref=ASAP:ABE-0011639;db_xref=UniProtKB/Swiss-Prot:P00944;db_xref=EcoGene:EG11074 EMBL gene 3731131 3732123 . + . ID=.7735;gene=xylF;locus_tag=b3566;gene_synonym=ECK3555;gene_synonym=JW3538;gene_synonym=xylT;db_xref=EcoGene:EG20252 EMBL CDS 3731131 3732123 . + 0 ID=.7736;gene=xylF;locus_tag=b3566;gene_synonym=ECK3555;gene_synonym=JW3538;gene_synonym=xylT;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=xylose binding protein transport system%3B periplasmic-binding component of ABC superfamily%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=D-xylose transporter subunit;protein_id=AAC76590.1;db_xref=GI:1789990;db_xref=ASAP:ABE-0011646;db_xref=UniProtKB/Swiss-Prot:P37387;db_xref=EcoGene:EG20252 EMBL gene 3732201 3733742 . + . ID=.7737;gene=xylG;locus_tag=b3567;gene_synonym=ECK3556;gene_synonym=JW3539;db_xref=EcoGene:EG12275 EMBL CDS 3732201 3733742 . + 0 ID=.7738;gene=xylG;locus_tag=b3567;gene_synonym=ECK3556;gene_synonym=JW3539;function=transport%3B Sugar metabolism;note=putative ATP-binding protein of xylose transport system%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=D-xylose ABC transporter dual domain ATPase;protein_id=AAC76591.1;db_xref=GI:1789991;db_xref=ASAP:ABE-0011648;db_xref=UniProtKB/Swiss-Prot:P37388;db_xref=EcoGene:EG12275 EMBL gene 3733720 3734901 . + . ID=.7739;gene=xylH;locus_tag=b3568;gene_synonym=ECK3557;gene_synonym=JW3540;db_xref=EcoGene:EG12276 EMBL CDS 3733720 3734901 . + 0 ID=.7740;gene=xylH;locus_tag=b3568;gene_synonym=ECK3557;gene_synonym=JW3540;function=putative transport%3B Not classified;note=putative xylose transport%2C membrane component%3B membrane component of ABC superfamily%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=D-xylose ABC transporter permease;protein_id=AAC76592.1;db_xref=GI:1789992;db_xref=ASAP:ABE-0011650;db_xref=UniProtKB/Swiss-Prot:P0AGI4;db_xref=EcoGene:EG12276 EMBL gene 3734979 3736157 . + . ID=.7741;gene=xylR;locus_tag=b3569;gene_synonym=ECK3558;gene_synonym=JW3541;db_xref=EcoGene:EG20253 EMBL CDS 3734979 3736157 . + 0 ID=.7742;gene=xylR;locus_tag=b3569;gene_synonym=ECK3558;gene_synonym=JW3541;function=putative regulator%3B Degradation of small molecules: Carbon compounds;note=putative regulator of xyl operon%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=xylose divergent operon transcriptional activator;protein_id=AAC76593.1;db_xref=GI:1789993;db_xref=ASAP:ABE-0011652;db_xref=UniProtKB/Swiss-Prot:P0ACI3;db_xref=EcoGene:EG20253 EMBL repeat_region 3736154 3736324 . + . ID=.7743;note=REP268 (repetitive extragenic palindromic) element%3B contains 4 REP sequences EMBL gene 3736353 3737177 . - . ID=.7744;gene=bax;locus_tag=b3570;gene_synonym=ECK3559;gene_synonym=JW5653;db_xref=EcoGene:EG11360 EMBL CDS 3736353 3737177 . - 0 ID=.7745;gene=bax;locus_tag=b3570;gene_synonym=ECK3559;gene_synonym=JW5653;function=putative enzyme%3B Not classified;note=putative ATP-binding protein;codon_start=1;transl_table=11;product=putative glucosaminidase;protein_id=AAT48192.1;db_xref=GI:48994948;db_xref=ASAP:ABE-0011655;db_xref=UniProtKB/Swiss-Prot:P27297;db_xref=EcoGene:EG11360 EMBL gene 3737497 3739527 . + . ID=.7746;gene=malS;locus_tag=b3571;gene_synonym=ECK3560;gene_synonym=JW3543;db_xref=EcoGene:EG11316 EMBL CDS 3737497 3739527 . + 0 ID=.7747;gene=malS;locus_tag=b3571;gene_synonym=ECK3560;gene_synonym=JW3543;ec_number=3.2.1.1;function=enzyme%3B Degradation of polysaccharides;note=GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0000272 - polysaccharide catabolic process%3B GO_process: GO:0006508 - proteolysis;codon_start=1;transl_table=11;product=alpha-amylase;protein_id=AAC76595.1;db_xref=GI:1789995;db_xref=ASAP:ABE-0011668;db_xref=UniProtKB/Swiss-Prot:P25718;db_xref=EcoGene:EG11316 EMBL gene 3739705 3740958 . + . ID=.7748;gene=avtA;locus_tag=b3572;gene_synonym=ECK3561;gene_synonym=JW5652;db_xref=EcoGene:EG10107 EMBL CDS 3739705 3740958 . + 0 ID=.7749;gene=avtA;locus_tag=b3572;gene_synonym=ECK3561;gene_synonym=JW5652;ec_number=2.6.1.66;function=enzyme%3B Amino acid biosynthesis: Alanine;note=alanine-alpha-ketoisovalerate (or valine-pyruvate) transaminase%2C transaminase C%3B GO_process: GO:0006523 - alanine biosynthetic process;codon_start=1;transl_table=11;product=valine-pyruvate aminotransferase%3B transaminase C%3B alanine-valine transaminase;protein_id=AAT48193.1;db_xref=GI:48994949;db_xref=ASAP:ABE-0011671;db_xref=UniProtKB/Swiss-Prot:P09053;db_xref=EcoGene:EG10107 EMBL repeat_region 3740964 3741061 . + . ID=.7750;note=RIP269 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 3741109 3741582 . - . ID=.7751;gene=ysaA;locus_tag=b3573;gene_synonym=ECK3562;gene_synonym=JW3545;db_xref=EcoGene:EG14319 EMBL CDS 3741109 3741582 . - 0 ID=.7752;gene=ysaA;locus_tag=b3573;gene_synonym=ECK3562;gene_synonym=JW3545;codon_start=1;transl_table=11;product=putative hydrogenase%2C 4Fe-4S ferredoxin-type component;protein_id=AAC76597.1;db_xref=GI:2367245;db_xref=ASAP:ABE-0011674;db_xref=UniProtKB/Swiss-Prot:P56256;db_xref=EcoGene:EG14319 EMBL gene 3741684 3742532 . - . ID=.7753;gene=yiaJ;locus_tag=b3574;gene_synonym=ECK3563;gene_synonym=JW3546;db_xref=EcoGene:EG12278 EMBL CDS 3741684 3742532 . - 0 ID=.7754;gene=yiaJ;locus_tag=b3574;gene_synonym=ECK3563;gene_synonym=JW3546;function=putative regulator%3B Not classified;note=GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=transcriptional repressor for the yiaKLMNO-lyxK-sgbHUE operon;protein_id=AAC76598.1;db_xref=GI:1789999;db_xref=ASAP:ABE-0011677;db_xref=UniProtKB/Swiss-Prot:P37671;db_xref=EcoGene:EG12278 EMBL gene 3742733 3743731 . + . ID=.7755;gene=yiaK;locus_tag=b3575;gene_synonym=ECK3564;gene_synonym=JW3547;db_xref=EcoGene:EG12279 EMBL CDS 3742733 3743731 . + 0 ID=.7756;gene=yiaK;locus_tag=b3575;gene_synonym=ECK3564;gene_synonym=JW3547;ec_number=1.1.1.-;function=putative enzyme%3B Not classified;note=putative dehydrogenase;codon_start=1;transl_table=11;product=2%2C3-diketo-L-gulonate reductase%2C NADH-dependent;protein_id=AAC76599.1;db_xref=GI:1790000;db_xref=ASAP:ABE-0011682;db_xref=UniProtKB/Swiss-Prot:P37672;db_xref=EcoGene:EG12279 EMBL gene 3743743 3744210 . + . ID=.7757;gene=yiaL;locus_tag=b3576;gene_synonym=ECK3565;gene_synonym=JW3548;db_xref=EcoGene:EG12280 EMBL CDS 3743743 3744210 . + 0 ID=.7758;gene=yiaL;locus_tag=b3576;gene_synonym=ECK3565;gene_synonym=JW3548;function=putative enzyme%3B Not classified;note=putative lipase;codon_start=1;transl_table=11;product=DUF386 family protein;protein_id=AAC76600.1;db_xref=GI:1790001;db_xref=ASAP:ABE-0011684;db_xref=UniProtKB/Swiss-Prot:P37673;db_xref=EcoGene:EG12280 EMBL gene 3744328 3744801 . + . ID=.7759;gene=yiaM;locus_tag=b3577;gene_synonym=ECK3566;gene_synonym=JW3549;db_xref=EcoGene:EG12281 EMBL CDS 3744328 3744801 . + 0 ID=.7760;gene=yiaM;locus_tag=b3577;gene_synonym=ECK3566;gene_synonym=JW3549;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;codon_start=1;transl_table=11;product=2%2C3-diketo-L-gulonate TRAP transporter small permease protein;protein_id=AAC76601.1;db_xref=GI:1790002;db_xref=ASAP:ABE-0011690;db_xref=UniProtKB/Swiss-Prot:P37674;db_xref=EcoGene:EG12281 EMBL gene 3744804 3746081 . + . ID=.7761;gene=yiaN;locus_tag=b3578;gene_synonym=ECK3567;gene_synonym=JW5651;db_xref=EcoGene:EG12282 EMBL CDS 3744804 3746081 . + 0 ID=.7762;gene=yiaN;locus_tag=b3578;gene_synonym=ECK3567;gene_synonym=JW5651;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=putative membrane protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=2%2C3-diketo-L-gulonate TRAP transporter large permease protein;protein_id=AAT48194.1;db_xref=GI:48994950;db_xref=ASAP:ABE-0011692;db_xref=UniProtKB/Swiss-Prot:P37675;db_xref=EcoGene:EG12282 EMBL gene 3746094 3747080 . + . ID=.7763;gene=yiaO;locus_tag=b3579;gene_synonym=ECK3568;gene_synonym=JW3551;db_xref=EcoGene:EG12283 EMBL CDS 3746094 3747080 . + 0 ID=.7764;gene=yiaO;locus_tag=b3579;gene_synonym=ECK3568;gene_synonym=JW3551;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=putative solute-binding transport protein;codon_start=1;transl_table=11;product=2%2C3-diketo-L-gulonate-binding periplasmic protein;protein_id=AAC76603.1;db_xref=GI:1790004;db_xref=ASAP:ABE-0011694;db_xref=UniProtKB/Swiss-Prot:P37676;db_xref=EcoGene:EG12283 EMBL gene 3747084 3748580 . + . ID=.7765;gene=lyxK;locus_tag=b3580;gene_synonym=ECK3569;gene_synonym=JW3552;gene_synonym=lyx;gene_synonym=xylK;gene_synonym=yiaP;db_xref=EcoGene:EG12284 EMBL CDS 3747084 3748580 . + 0 ID=.7766;gene=lyxK;locus_tag=b3580;gene_synonym=ECK3569;gene_synonym=JW3552;gene_synonym=lyx;gene_synonym=xylK;gene_synonym=yiaP;ec_number=2.7.1.53;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=L-xylulose kinase%2C cryptic%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=L-xylulose kinase;protein_id=AAC76604.1;db_xref=GI:1790005;db_xref=ASAP:ABE-0011696;db_xref=UniProtKB/Swiss-Prot:P37677;db_xref=EcoGene:EG12284 EMBL gene 3748577 3749239 . + . ID=.7767;gene=sgbH;locus_tag=b3581;gene_synonym=ECK3570;gene_synonym=JW3553;gene_synonym=yiaQ;db_xref=EcoGene:EG12285 EMBL CDS 3748577 3749239 . + 0 ID=.7768;gene=sgbH;locus_tag=b3581;gene_synonym=ECK3570;gene_synonym=JW3553;gene_synonym=yiaQ;ec_number=4.1.2.-;function=enzyme%3B Central intermediary metabolism: Pool%2C multipurpose conversions;note=probable 3-hexulose 6-phosphate synthase;codon_start=1;transl_table=11;product=3-keto-L-gulonate 6-phosphate decarboxylase;protein_id=AAC76605.1;db_xref=GI:1790006;db_xref=ASAP:ABE-0011698;db_xref=UniProtKB/Swiss-Prot:P37678;db_xref=EcoGene:EG12285 EMBL gene 3749232 3750092 . + . ID=.7769;gene=sgbU;locus_tag=b3582;gene_synonym=ECK3571;gene_synonym=JW5650;gene_synonym=yiaR;db_xref=EcoGene:EG12286 EMBL CDS 3749232 3750092 . + 0 ID=.7770;gene=sgbU;locus_tag=b3582;gene_synonym=ECK3571;gene_synonym=JW5650;gene_synonym=yiaR;function=putative enzyme%3B Central intermediary metabolism: Pool%2C multipurpose conversions;codon_start=1;transl_table=11;product=putative L-xylulose 5-phosphate 3-epimerase;protein_id=AAC76606.2;db_xref=GI:87082294;db_xref=ASAP:ABE-0011700;db_xref=UniProtKB/Swiss-Prot:P37679;db_xref=EcoGene:EG12286 EMBL gene 3750086 3750781 . + . ID=.7771;gene=sgbE;locus_tag=b3583;gene_synonym=ECK3572;gene_synonym=JW3555;gene_synonym=yiaS;db_xref=EcoGene:EG12287 EMBL CDS 3750086 3750781 . + 0 ID=.7772;gene=sgbE;locus_tag=b3583;gene_synonym=ECK3572;gene_synonym=JW3555;gene_synonym=yiaS;ec_number=5.1.3.4;function=enzyme%3B Central intermediary metabolism: Pool%2C multipurpose conversions;note=GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=L-ribulose-5-phosphate 4-epimerase;protein_id=AAC76607.1;db_xref=GI:1790008;db_xref=ASAP:ABE-0011702;db_xref=UniProtKB/Swiss-Prot:P37680;db_xref=EcoGene:EG12287 EMBL gene 3750813 3750914 . - . ID=.7773;gene=ysaC;locus_tag=b4648;gene_synonym=ECK4459;pseudo=true;db_xref=EcoGene:EG14455 EMBL CDS 3750813 3750914 . - 0 ID=.7774;gene=ysaC;locus_tag=b4648;gene_synonym=ECK4459;note=pseudogene;pseudo=true;codon_start=1;transl_table=11;db_xref=EcoGene:EG14455 EMBL gene 3750918 3751109 . + . ID=.7775;gene=ysaD;locus_tag=b4649;gene_synonym=ECK4460;pseudo=true;db_xref=EcoGene:EG14456 EMBL CDS 3750918 3751109 . + 0 ID=.7776;gene=ysaD;locus_tag=b4649;gene_synonym=ECK4460;note=pseudogene%2C internal sequence remnant;pseudo=true;codon_start=1;transl_table=11;db_xref=EcoGene:EG14456 EMBL gene 3751128 3751868 . - . ID=.7777;gene=yiaT;locus_tag=b3584;gene_synonym=ECK3573;gene_synonym=JW3556;db_xref=EcoGene:EG12288 EMBL CDS 3751128 3751868 . - 0 ID=.7778;gene=yiaT;locus_tag=b3584;gene_synonym=ECK3573;gene_synonym=JW3556;function=putative membrane%3B Not classified;note=GO_component: GO:0009279 - cell outer membrane;codon_start=1;transl_table=11;product=putative outer membrane protein;protein_id=AAC76608.1;db_xref=GI:1790010;db_xref=ASAP:ABE-0011704;db_xref=UniProtKB/Swiss-Prot:P37681;db_xref=EcoGene:EG12288 EMBL gene 3751992 3752966 . + . ID=.7779;gene=yiaU;locus_tag=b3585;gene_synonym=ECK3574;gene_synonym=JW3557;db_xref=EcoGene:EG12289 EMBL CDS 3751992 3752966 . + 0 ID=.7780;gene=yiaU;locus_tag=b3585;gene_synonym=ECK3574;gene_synonym=JW3557;function=putative regulator%3B Not classified;note=putative transcriptional regulator LYSR-type%3B GO_function: GO:0016563 - transcription activator activity%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=putative DNA-binding transcriptional regulator;protein_id=AAC76609.1;db_xref=GI:1790011;db_xref=ASAP:ABE-0011710;db_xref=UniProtKB/Swiss-Prot:P37682;db_xref=EcoGene:EG12289 EMBL gene 3752963 3754099 . - . ID=.7781;gene=yiaV;locus_tag=b3586;gene_synonym=ECK3575;gene_synonym=JW3558;db_xref=EcoGene:EG12290 EMBL CDS 3752963 3754099 . - 0 ID=.7782;gene=yiaV;locus_tag=b3586;gene_synonym=ECK3575;gene_synonym=JW3558;function=putative membrane%3B Not classified;note=putative membrane protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=signal-anchored membrane fusion protein (MFP) component of efflux pump;protein_id=AAC76610.1;db_xref=GI:1790012;db_xref=ASAP:ABE-0011712;db_xref=UniProtKB/Swiss-Prot:P37683;db_xref=EcoGene:EG12290 EMBL gene 3754105 3754428 . - . ID=.7783;gene=yiaW;locus_tag=b3587;gene_synonym=ECK3576;gene_synonym=JW3559;db_xref=EcoGene:EG12291 EMBL CDS 3754105 3754428 . - 0 ID=.7784;gene=yiaW;locus_tag=b3587;gene_synonym=ECK3576;gene_synonym=JW3559;codon_start=1;transl_table=11;product=DUF3302 family inner membrane protein;protein_id=AAC76611.1;db_xref=GI:1790013;db_xref=ASAP:ABE-0011714;db_xref=UniProtKB/Swiss-Prot:P0ADK4;db_xref=EcoGene:EG12291 EMBL repeat_region 3754860 3754941 . + . ID=.7785;note=REP270 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 3754973 3756511 . - . ID=.7786;gene=aldB;locus_tag=b3588;gene_synonym=ECK3577;gene_synonym=JW3561;gene_synonym=yiaX;db_xref=EcoGene:EG12292 EMBL CDS 3754973 3756511 . - 0 ID=.7787;gene=aldB;locus_tag=b3588;gene_synonym=ECK3577;gene_synonym=JW3561;gene_synonym=yiaX;ec_number=1.2.1.22;function=enzyme%3B Degradation of small molecules: Carbon compounds;experiment=N-terminus verified by Edman degradation: PMID 15659684;note=aldehyde dehydrogenase B (lactaldehyde dehydrogenase)%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0009438 - methylglyoxal metabolic process;codon_start=1;transl_table=11;product=aldehyde dehydrogenase B;protein_id=AAC76612.2;db_xref=GI:87082295;db_xref=ASAP:ABE-0011718;db_xref=UniProtKB/Swiss-Prot:P37685;db_xref=EcoGene:EG12292 EMBL gene 3756676 3757827 . - . ID=.7788;gene=yiaY;locus_tag=b3589;gene_synonym=ECK3578;gene_synonym=JW5648;db_xref=EcoGene:EG12293 EMBL CDS 3756676 3757827 . - 0 ID=.7789;gene=yiaY;locus_tag=b3589;gene_synonym=ECK3578;gene_synonym=JW5648;function=enzyme%3B Not classified;note=putative oxidoreductase;codon_start=1;transl_table=11;product=L-threonine dehydrogenase;protein_id=AAT48195.1;db_xref=GI:48994951;db_xref=ASAP:ABE-0011725;db_xref=UniProtKB/Swiss-Prot:P37686;db_xref=EcoGene:EG12293 EMBL gene 3758017 3759861 . - . ID=.7790;gene=selB;locus_tag=b3590;gene_synonym=ECK3579;gene_synonym=fdhA;gene_synonym=JW3563;db_xref=EcoGene:EG10942 EMBL CDS 3758017 3759861 . - 0 ID=.7791;gene=selB;locus_tag=b3590;gene_synonym=ECK3579;gene_synonym=fdhA;gene_synonym=JW3563;function=factor%3B Proteins - translation and modification;experiment=N-terminus verified by Edman degradation: PMID 2140572;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=selenocysteinyl-tRNA-specific translation factor;protein_id=AAC76614.1;db_xref=GI:2367247;db_xref=ASAP:ABE-0011729;db_xref=UniProtKB/Swiss-Prot:P14081;db_xref=EcoGene:EG10942 EMBL gene 3759858 3761249 . - . ID=.7792;gene=selA;locus_tag=b3591;gene_synonym=ECK3580;gene_synonym=fdhA;gene_synonym=JW3564;db_xref=EcoGene:EG10941 EMBL CDS 3759858 3761249 . - 0 ID=.7793;gene=selA;locus_tag=b3591;gene_synonym=ECK3580;gene_synonym=fdhA;gene_synonym=JW3564;ec_number=2.9.1.1;function=enzyme%3B Aminoacyl tRNA synthetases%2C tRNA modification;note=selenocysteine synthase: L-seryl-tRNA (Ser) selenium transferase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0008615 - pyridoxine biosynthetic process%3B GO_process: GO:0009451 - RNA modification;codon_start=1;transl_table=11;product=selenocysteine synthase;protein_id=AAC76615.1;db_xref=GI:2367248;db_xref=ASAP:ABE-0011731;db_xref=UniProtKB/Swiss-Prot:P0A821;db_xref=EcoGene:EG10941 EMBL gene 3761347 3761955 . - . ID=.7794;gene=yibF;locus_tag=b3592;gene_synonym=ECK3581;gene_synonym=JW3565;db_xref=EcoGene:EG11762 EMBL CDS 3761347 3761955 . - 0 ID=.7795;gene=yibF;locus_tag=b3592;gene_synonym=ECK3581;gene_synonym=JW3565;function=putative enzyme%3B Not classified;note=putative S-transferase;codon_start=1;transl_table=11;product=glutathione S-transferase homolog;protein_id=AAC76616.1;db_xref=GI:1790018;db_xref=ASAP:ABE-0011736;db_xref=UniProtKB/Swiss-Prot:P0ACA1;db_xref=EcoGene:EG11762 EMBL gene 3762183 3766316 . + . ID=.7796;gene=rhsA;locus_tag=b3593;gene_synonym=ECK3582;gene_synonym=JW3566;db_xref=EcoGene:EG10846 EMBL CDS 3762183 3766316 . + 0 ID=.7797;gene=rhsA;locus_tag=b3593;gene_synonym=ECK3582;gene_synonym=JW3566;note=rhsA protein in rhs element;codon_start=1;transl_table=11;product=Rhs protein with putative toxin 55 domain%3B putative polysaccharide synthesis/export protein%3B putative neighboring cell growth inhibitor;protein_id=AAC76617.1;db_xref=GI:1790020;db_xref=ASAP:ABE-0011742;db_xref=UniProtKB/Swiss-Prot:P16916;db_xref=EcoGene:EG10846 EMBL gene 3766337 3767179 . + . ID=.7798;gene=yibA;locus_tag=b3594;gene_synonym=ECK3583;gene_synonym=JW3568;db_xref=EcoGene:EG11187 EMBL CDS 3766337 3767179 . + 0 ID=.7799;gene=yibA;locus_tag=b3594;gene_synonym=ECK3583;gene_synonym=JW3568;codon_start=1;transl_table=11;product=putative immunity protein for polymorphic toxin RhsA%3B HEAT-domain protein%3B lethality reduction protein;protein_id=AAC76618.1;db_xref=GI:1790021;db_xref=ASAP:ABE-0011744;db_xref=UniProtKB/Swiss-Prot:P0ADK6;db_xref=EcoGene:EG11187 EMBL gene 3767221 3768165 . + . ID=.7800;gene=rhsJ;locus_tag=b3595;gene_synonym=ECK3584;gene_synonym=JW5647;gene_synonym=yibJ;pseudo=true;db_xref=EcoGene:EG11766 EMBL CDS 3767221 3768165 . + 0 ID=.7801;gene=rhsJ;locus_tag=b3595;gene_synonym=ECK3584;gene_synonym=JW5647;gene_synonym=yibJ;note=Rhs-family protein;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0011746;db_xref=UniProtKB/Swiss-Prot:P32109;db_xref=EcoGene:EG11766 EMBL gene 3768177 3768638 . + . ID=.7802;gene=yibG;locus_tag=b3596;gene_synonym=ECK3585;gene_synonym=JW3570;db_xref=EcoGene:EG11763 EMBL CDS 3768177 3768638 . + 0 ID=.7803;gene=yibG;locus_tag=b3596;gene_synonym=ECK3585;gene_synonym=JW3570;codon_start=1;transl_table=11;product=TPR-like repeat protein;protein_id=AAC76620.1;db_xref=GI:1790023;db_xref=ASAP:ABE-0011750;db_xref=UniProtKB/Swiss-Prot:P32106;db_xref=EcoGene:EG11763 EMBL gene 3768639 3768890 . + . ID=.7804;gene=yibS;locus_tag=b4650;gene_synonym=ECK4440;pseudo=true;db_xref=EcoGene:EG14348 EMBL CDS 3768639 3768890 . + 0 ID=.7805;gene=yibS;locus_tag=b4650;gene_synonym=ECK4440;note=pseudogene%2C Rhs family protein;pseudo=true;codon_start=1;transl_table=11;db_xref=EcoGene:EG14348 EMBL gene 3768892 3769256 . + . ID=.7806;gene=yibW;locus_tag=b4651;gene_synonym=ECK4450;pseudo=true;db_xref=EcoGene:EG14439 EMBL biological_region 3768892 3769256 . + 0 ID=.7807;featflags=type:CDS;gene=yibW;locus_tag=b4651;gene_synonym=ECK4450;note=pseudogene%2C rhsA-linked;pseudo=true;codon_start=1;transl_table=11;db_xref=EcoGene:EG14439 EMBL CDS 3768892 3768975 . + 0 Parent=.7807 EMBL CDS 3768975 3769256 . + 0 Parent=.7807 EMBL gene 3769345 3769783 . + . ID=.7810;gene=yibV;locus_tag=b4615;gene_synonym=ECK4424;pseudo=true;db_xref=EcoGene:EG14438 EMBL biological_region 3769345 3769783 . + 0 ID=.7811;featflags=type:CDS;gene=yibV;locus_tag=b4615;gene_synonym=ECK4424;note=pseudogene%2C putative cryptic Rhs immunity protein;pseudo=true;codon_start=1;transl_table=11;db_xref=UniProtKB/Swiss-Prot:A5A625;db_xref=EcoGene:EG14438 EMBL CDS 3769345 3769671 . + 0 Parent=.7811 EMBL CDS 3769673 3769783 . + 0 Parent=.7811 EMBL gene 3769948 3770146 . + . ID=.7814;gene=yibU;locus_tag=b4652;gene_synonym=ECK4449;pseudo=true;db_xref=EcoGene:EG14437 EMBL biological_region 3769948 3770146 . + 0 ID=.7815;featflags=type:CDS;gene=yibU;locus_tag=b4652;gene_synonym=ECK4449;note=pseudogene%2C H repeat-associated protein;pseudo=true;codon_start=1;transl_table=11;db_xref=EcoGene:EG14437 EMBL CDS 3769948 3770034 . + 0 Parent=.7815 EMBL CDS 3770033 3770146 . + 0 Parent=.7815 EMBL gene 3770243 3771379 . - . ID=.7818;gene=yibH;locus_tag=b3597;gene_synonym=ECK3586;gene_synonym=JW3571;db_xref=EcoGene:EG11764 EMBL CDS 3770243 3771379 . - 0 ID=.7819;gene=yibH;locus_tag=b3597;gene_synonym=ECK3586;gene_synonym=JW3571;function=putative membrane%3B Not classified;note=putative membrane protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative membrane fusion protein (MFP) component of efflux pump;protein_id=AAC76621.1;db_xref=GI:1790024;db_xref=ASAP:ABE-0011752;db_xref=UniProtKB/Swiss-Prot:P0AFV0;db_xref=EcoGene:EG11764 EMBL gene 3771382 3771744 . - . ID=.7820;gene=yibI;locus_tag=b3598;gene_synonym=ECK3587;gene_synonym=JW3572;db_xref=EcoGene:EG11765 EMBL CDS 3771382 3771744 . - 0 ID=.7821;gene=yibI;locus_tag=b3598;gene_synonym=ECK3587;gene_synonym=JW3572;codon_start=1;transl_table=11;product=DUF3302 family inner membrane protein;protein_id=AAC76622.1;db_xref=GI:1790025;db_xref=ASAP:ABE-0011754;db_xref=UniProtKB/Swiss-Prot:P32108;db_xref=EcoGene:EG11765 EMBL gene 3772281 3774194 . + . ID=.7822;gene=mtlA;locus_tag=b3599;gene_synonym=ECK3588;gene_synonym=JW3573;gene_synonym=mtlC;db_xref=EcoGene:EG10615 EMBL CDS 3772281 3774194 . + 0 ID=.7823;gene=mtlA;locus_tag=b3599;gene_synonym=ECK3588;gene_synonym=JW3573;gene_synonym=mtlC;ec_number=2.7.1.69;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=PTS system%2C mannitol-specific enzyme IIABC components%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=mannitol-specific PTS enzyme: IIA%2C IIB and IIC components;protein_id=AAC76623.1;db_xref=GI:1790027;db_xref=ASAP:ABE-0011761;db_xref=UniProtKB/Swiss-Prot:P00550;db_xref=EcoGene:EG10615 EMBL repeat_region 3774236 3774334 . + . ID=.7824;note=RIP271 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 3774424 3775572 . + . ID=.7825;gene=mtlD;locus_tag=b3600;gene_synonym=ECK3589;gene_synonym=JW3574;db_xref=EcoGene:EG10616 EMBL CDS 3774424 3775572 . + 0 ID=.7826;gene=mtlD;locus_tag=b3600;gene_synonym=ECK3589;gene_synonym=JW3574;ec_number=1.1.1.17;function=enzyme%3B Degradation of small molecules: Carbon compounds;experiment=N-terminus verified by Edman degradation: PMID 6384188;note=mannitol-1-phosphate dehydrogenase%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=mannitol-1-phosphate dehydrogenase%2C NAD-dependent;protein_id=AAC76624.1;db_xref=GI:1790028;db_xref=ASAP:ABE-0011767;db_xref=UniProtKB/Swiss-Prot:P09424;db_xref=EcoGene:EG10616 EMBL gene 3775572 3776159 . + . ID=.7827;gene=mtlR;locus_tag=b3601;gene_synonym=ECK3590;gene_synonym=JW3575;db_xref=EcoGene:EG11965 EMBL CDS 3775572 3776159 . + 0 ID=.7828;gene=mtlR;locus_tag=b3601;gene_synonym=ECK3590;gene_synonym=JW3575;function=regulator%3B Degradation of small molecules: Carbon compounds;note=repressor for mtl%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=mannitol operon repressor;protein_id=AAC76625.1;db_xref=GI:1790029;db_xref=ASAP:ABE-0011769;db_xref=UniProtKB/Swiss-Prot:P0AF10;db_xref=EcoGene:EG11965 EMBL gene 3776171 3776380 . - . ID=.7829;gene=yibT;locus_tag=b4554;gene_synonym=ECK3591;gene_synonym=JW3576;db_xref=EcoGene:EG14397 EMBL CDS 3776171 3776380 . - 0 ID=.7830;gene=yibT;locus_tag=b4554;gene_synonym=ECK3591;gene_synonym=JW3576;note=GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=ABD18704.1;db_xref=GI:87082296;db_xref=ASAP:ABE-0285075;db_xref=UniProtKB/Swiss-Prot:Q2M7R5;db_xref=EcoGene:EG14397 EMBL gene 3776665 3777027 . + . ID=.7831;gene=yibL;locus_tag=b3602;gene_synonym=ECK3592;gene_synonym=JW3577;db_xref=EcoGene:EG11964 EMBL CDS 3776665 3777027 . + 0 ID=.7832;gene=yibL;locus_tag=b3602;gene_synonym=ECK3592;gene_synonym=JW3577;codon_start=1;transl_table=11;product=ribosome-associated DUF2810 family protein;protein_id=AAC76626.1;db_xref=GI:1790030;db_xref=ASAP:ABE-0011773;db_xref=UniProtKB/Swiss-Prot:P0ADK8;db_xref=EcoGene:EG11964 EMBL repeat_region 3777064 3777097 . + . ID=.7833;note=REP272 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 3777399 3779054 . + . ID=.7834;gene=lldP;locus_tag=b3603;gene_synonym=ECK3593;gene_synonym=JW3578;gene_synonym=lct;gene_synonym=lctP;db_xref=EcoGene:EG11961 EMBL CDS 3777399 3779054 . + 0 ID=.7835;gene=lldP;locus_tag=b3603;gene_synonym=ECK3593;gene_synonym=JW3578;gene_synonym=lct;gene_synonym=lctP;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=L-lactate permease;protein_id=AAC76627.1;db_xref=GI:1790031;db_xref=ASAP:ABE-0011777;db_xref=UniProtKB/Swiss-Prot:P33231;db_xref=EcoGene:EG11961 EMBL gene 3779054 3779830 . + . ID=.7836;gene=lldR;locus_tag=b3604;gene_synonym=ECK3594;gene_synonym=JW3579;gene_synonym=lct;gene_synonym=lctR;db_xref=EcoGene:EG11962 EMBL CDS 3779054 3779830 . + 0 ID=.7837;gene=lldR;locus_tag=b3604;gene_synonym=ECK3594;gene_synonym=JW3579;gene_synonym=lct;gene_synonym=lctR;function=regulator%3B Energy metabolism%2C carbon: Aerobic respiration;note=transcriptional regulator%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0009060 - aerobic respiration%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=dual role activator/repressor for lldPRD operon;protein_id=AAC76628.1;db_xref=GI:1790032;db_xref=ASAP:ABE-0011782;db_xref=UniProtKB/Swiss-Prot:P0ACL7;db_xref=EcoGene:EG11962 EMBL gene 3779827 3781017 . + . ID=.7838;gene=lldD;locus_tag=b3605;gene_synonym=ECK3595;gene_synonym=JW3580;gene_synonym=lct;gene_synonym=lctD;db_xref=EcoGene:EG11963 EMBL CDS 3779827 3781017 . + 0 ID=.7839;gene=lldD;locus_tag=b3605;gene_synonym=ECK3595;gene_synonym=JW3580;gene_synonym=lct;gene_synonym=lctD;ec_number=1.1.2.3;function=enzyme%3B Energy metabolism%2C carbon: Aerobic respiration;note=L-lactate dehydrogenase%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009060 - aerobic respiration%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=L-lactate dehydrogenase%2C FMN-linked;protein_id=AAC76629.1;db_xref=GI:1790033;db_xref=ASAP:ABE-0011784;db_xref=UniProtKB/Swiss-Prot:P33232;db_xref=EcoGene:EG11963 EMBL gene 3781215 3781688 . + . ID=.7840;gene=trmL;locus_tag=b3606;gene_synonym=ECK3596;gene_synonym=JW3581;gene_synonym=yibK;db_xref=EcoGene:EG11888 EMBL CDS 3781215 3781688 . + 0 ID=.7841;gene=trmL;locus_tag=b3606;gene_synonym=ECK3596;gene_synonym=JW3581;gene_synonym=yibK;function=enzyme%3B tRNA modification;note=GO_process: GO:0009451 - RNA modification;codon_start=1;transl_table=11;product=tRNA Leu mC34%2CmU34 2'-O-methyltransferase%2C SAM-dependent;protein_id=AAC76630.1;db_xref=GI:1790034;db_xref=ASAP:ABE-0011790;db_xref=UniProtKB/Swiss-Prot:P0AGJ7;db_xref=EcoGene:EG11888 EMBL repeat_region 3781698 3781726 . + . ID=.7842;note=REP273 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 3781741 3782562 . - . ID=.7843;gene=cysE;locus_tag=b3607;gene_synonym=ECK3597;gene_synonym=JW3582;db_xref=EcoGene:EG10187 EMBL CDS 3781741 3782562 . - 0 ID=.7844;gene=cysE;locus_tag=b3607;gene_synonym=ECK3597;gene_synonym=JW3582;ec_number=2.3.1.30;function=enzyme%3B Amino acid biosynthesis: Cysteine;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0019344 - cysteine biosynthetic process;codon_start=1;transl_table=11;product=serine acetyltransferase;protein_id=AAC76631.1;db_xref=GI:1790035;db_xref=ASAP:ABE-0011793;db_xref=UniProtKB/Swiss-Prot:P0A9D4;db_xref=EcoGene:EG10187 EMBL gene 3782642 3783661 . - . ID=.7845;gene=gpsA;locus_tag=b3608;gene_synonym=ECK3598;gene_synonym=JW3583;db_xref=EcoGene:EG20091 EMBL CDS 3782642 3783661 . - 0 ID=.7846;gene=gpsA;locus_tag=b3608;gene_synonym=ECK3598;gene_synonym=JW3583;ec_number=1.1.1.94;function=enzyme%3B Energy metabolism%2C carbon: Aerobic respiration;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006071 - glycerol metabolic process%3B GO_process: GO:0006793 - phosphorus metabolic process;codon_start=1;transl_table=11;product=glycerol-3-phosphate dehydrogenase (NAD+);protein_id=AAC76632.1;db_xref=GI:1790037;db_xref=ASAP:ABE-0011795;db_xref=UniProtKB/Swiss-Prot:P0A6S7;db_xref=EcoGene:EG20091 EMBL gene 3783661 3784128 . - . ID=.7847;gene=secB;locus_tag=b3609;gene_synonym=ECK3599;gene_synonym=JW3584;db_xref=EcoGene:EG10937 EMBL CDS 3783661 3784128 . - 0 ID=.7848;gene=secB;locus_tag=b3609;gene_synonym=ECK3599;gene_synonym=JW3584;function=transport%3B Protein%2C peptide secretion;note=protein export%3B molecular chaperone%3B may bind to signel sequence%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=protein export chaperone;protein_id=AAC76633.1;db_xref=GI:1790038;db_xref=ASAP:ABE-0011798;db_xref=UniProtKB/Swiss-Prot:P0AG86;db_xref=EcoGene:EG10937 EMBL gene 3784191 3784442 . - . ID=.7849;gene=grxC;locus_tag=b3610;gene_synonym=ECK3600;gene_synonym=JW3585;gene_synonym=yibM;db_xref=EcoGene:EG12294 EMBL CDS 3784191 3784442 . - 0 ID=.7850;gene=grxC;locus_tag=b3610;gene_synonym=ECK3600;gene_synonym=JW3585;gene_synonym=yibM;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Thioredoxin%2C glutaredoxin%2C glutathione;codon_start=1;transl_table=11;product=glutaredoxin 3;protein_id=AAC76634.1;db_xref=GI:1790039;db_xref=ASAP:ABE-0011801;db_xref=UniProtKB/Swiss-Prot:P0AC62;db_xref=EcoGene:EG12294 EMBL gene 3784584 3785015 . - . ID=.7851;gene=yibN;locus_tag=b3611;gene_synonym=ECK3601;gene_synonym=JW3586;db_xref=EcoGene:EG12295 EMBL CDS 3784584 3785015 . - 0 ID=.7852;gene=yibN;locus_tag=b3611;gene_synonym=ECK3601;gene_synonym=JW3586;codon_start=1;transl_table=11;product=putative rhodanese-related sulfurtransferase;protein_id=AAC76635.1;db_xref=GI:1790040;db_xref=ASAP:ABE-0011805;db_xref=UniProtKB/Swiss-Prot:P0AG27;db_xref=EcoGene:EG12295 EMBL gene 3785260 3786804 . + . ID=.7853;gene=gpmM;locus_tag=b3612;gene_synonym=ECK3602;gene_synonym=gpmC;gene_synonym=gpmI;gene_synonym=JW3587;gene_synonym=pgmI;gene_synonym=yibO;db_xref=EcoGene:EG12296 EMBL CDS 3785260 3786804 . + 0 ID=.7854;gene=gpmM;locus_tag=b3612;gene_synonym=ECK3602;gene_synonym=gpmC;gene_synonym=gpmI;gene_synonym=JW3587;gene_synonym=pgmI;gene_synonym=yibO;function=putative enzyme%3B Not classified;note=putative 2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=phosphoglycero mutase III%2C cofactor-independent;protein_id=AAC76636.1;db_xref=GI:1790041;db_xref=ASAP:ABE-0011818;db_xref=UniProtKB/Swiss-Prot:P37689;db_xref=EcoGene:EG12296 EMBL gene 3786838 3788097 . + . ID=.7855;gene=envC;locus_tag=b3613;gene_synonym=ECK3603;gene_synonym=JW5646;gene_synonym=slm11;gene_synonym=yibP;db_xref=EcoGene:EG12297 EMBL CDS 3786838 3788097 . + 0 ID=.7856;gene=envC;locus_tag=b3613;gene_synonym=ECK3603;gene_synonym=JW5646;gene_synonym=slm11;gene_synonym=yibP;function=enzyme%3B Murein sacculus%2C peptidoglycan;note=putative membrane protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=activator of AmiB%2CC murein hydrolases%2C septal ring factor;protein_id=AAC76637.2;db_xref=GI:87082297;db_xref=ASAP:ABE-0011820;db_xref=UniProtKB/Swiss-Prot:P37690;db_xref=EcoGene:EG12297 EMBL gene 3788101 3789060 . + . ID=.7857;gene=yibQ;locus_tag=b3614;gene_synonym=ECK3604;gene_synonym=JW5645;db_xref=EcoGene:EG12298 EMBL CDS 3788101 3789060 . + 0 ID=.7858;gene=yibQ;locus_tag=b3614;gene_synonym=ECK3604;gene_synonym=JW5645;codon_start=1;transl_table=11;product=putative polysaccharide deacetylase;protein_id=AAC76638.2;db_xref=GI:87082298;db_xref=ASAP:ABE-0011824;db_xref=UniProtKB/Swiss-Prot:P37691;db_xref=EcoGene:EG12298 EMBL gene 3789047 3790081 . - . ID=.7859;gene=waaH;locus_tag=b3615;gene_synonym=ECK3605;gene_synonym=JW3590;gene_synonym=yibD;db_xref=EcoGene:EG11266 EMBL CDS 3789047 3790081 . - 0 ID=.7860;gene=waaH;locus_tag=b3615;gene_synonym=ECK3605;gene_synonym=JW3590;gene_synonym=yibD;function=putative regulator%3B Not classified;note=putative regulator;codon_start=1;transl_table=11;product=LPS(HepIII)-glucuronic acid glycosyltransferase;protein_id=AAC76639.1;db_xref=GI:1790044;db_xref=ASAP:ABE-0011826;db_xref=UniProtKB/Swiss-Prot:P11290;db_xref=EcoGene:EG11266 EMBL gene 3790320 3791345 . - . ID=.7861;gene=tdh;locus_tag=b3616;gene_synonym=ECK3606;gene_synonym=JW3591;db_xref=EcoGene:EG10993 EMBL CDS 3790320 3791345 . - 0 ID=.7862;gene=tdh;locus_tag=b3616;gene_synonym=ECK3606;gene_synonym=JW3591;ec_number=1.1.1.103;function=enzyme%3B Degradation of small molecules: Amino acids;experiment=N-terminus verified by Edman degradation: PMID 2647748;note=threonine dehydrogenase%3B GO_process: GO:0009063 - cellular amino acid catabolic process;codon_start=1;transl_table=11;product=L-threonine 3-dehydrogenase%2C NAD(P)-binding;protein_id=AAC76640.1;db_xref=GI:1790045;db_xref=ASAP:ABE-0011830;db_xref=UniProtKB/Swiss-Prot:P07913;db_xref=EcoGene:EG10993 EMBL gene 3791355 3792551 . - . ID=.7863;gene=kbl;locus_tag=b3617;gene_synonym=ECK3607;gene_synonym=JW3592;db_xref=EcoGene:EG10512 EMBL CDS 3791355 3792551 . - 0 ID=.7864;gene=kbl;locus_tag=b3617;gene_synonym=ECK3607;gene_synonym=JW3592;ec_number=2.3.1.29;function=enzyme%3B Central intermediary metabolism: Pool%2C multipurpose conversions;experiment=N-terminus verified by Edman degradation: PMID 3117785;note=2-amino-3-ketobutyrate CoA ligase (glycine acetyltransferase)%3B GO_process: GO:0009063 - cellular amino acid catabolic process;codon_start=1;transl_table=11;product=glycine C-acetyltransferase;protein_id=AAC76641.1;db_xref=GI:1790046;db_xref=ASAP:ABE-0011832;db_xref=UniProtKB/Swiss-Prot:P0AB77;db_xref=EcoGene:EG10512 EMBL gene 3792826 3793683 . - . ID=.7865;gene=yibB;locus_tag=b3618;gene_synonym=ECK3608;gene_synonym=htrL;gene_synonym=JW5644;db_xref=EcoGene:EG11188 EMBL CDS 3792826 3793683 . - 0 ID=.7866;gene=yibB;locus_tag=b3618;gene_synonym=ECK3608;gene_synonym=htrL;gene_synonym=JW5644;function=phenotype%3B Not classified;note=involved in lipopolysaccharide biosynthesis%3B GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0009103 - lipopolysaccharide biosynthetic process;codon_start=1;transl_table=11;product=YibB family protein%2C function unknown;protein_id=AAC76642.2;db_xref=GI:87082299;db_xref=ASAP:ABE-0011838;db_xref=UniProtKB/Swiss-Prot:P25666;db_xref=EcoGene:EG11188 EMBL gene 3793987 3794919 . + . ID=.7867;gene=hldD;locus_tag=b3619;gene_synonym=ECK3609;gene_synonym=gmhD;gene_synonym=htrM;gene_synonym=JW3594;gene_synonym=nbsB;gene_synonym=rfaD;gene_synonym=waaD;db_xref=EcoGene:EG10838 EMBL CDS 3793987 3794919 . + 0 ID=.7868;gene=hldD;locus_tag=b3619;gene_synonym=ECK3609;gene_synonym=gmhD;gene_synonym=htrM;gene_synonym=JW3594;gene_synonym=nbsB;gene_synonym=rfaD;gene_synonym=waaD;ec_number=5.1.3.20;function=enzyme%3B Surface polysaccharides %26 antigens;experiment=N-terminus verified by Edman degradation: PMID 2198271%2C9298646;note=ADP-L-glycero-D-mannoheptose-6-epimerase%3B GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0009435 - NAD biosynthetic process;codon_start=1;transl_table=11;product=ADP-L-glycero-D-mannoheptose-6-epimerase%2C NAD(P)-binding;protein_id=AAC76643.1;db_xref=GI:1790049;db_xref=ASAP:ABE-0011843;db_xref=UniProtKB/Swiss-Prot:P67910;db_xref=EcoGene:EG10838 EMBL gene 3794929 3795975 . + . ID=.7869;gene=waaF;locus_tag=b3620;gene_synonym=ECK3610;gene_synonym=JW3595;gene_synonym=rfaF;db_xref=EcoGene:EG12210 EMBL CDS 3794929 3795975 . + 0 ID=.7870;gene=waaF;locus_tag=b3620;gene_synonym=ECK3610;gene_synonym=JW3595;gene_synonym=rfaF;ec_number=2.-.-.-;function=enzyme%3B Macromolecule metabolism: Lipopolysaccharide;note=ADP-heptose--lps heptosyltransferase II%3B lipopolysaccharide core biosynthesis%3B GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0009244 - lipopolysaccharide core region biosynthetic process;codon_start=1;transl_table=11;product=ADP-heptose:LPS heptosyltransferase II;protein_id=AAC76644.1;db_xref=GI:1790050;db_xref=ASAP:ABE-0011845;db_xref=UniProtKB/Swiss-Prot:P37692;db_xref=EcoGene:EG12210 EMBL gene 3795979 3796938 . + . ID=.7871;gene=waaC;locus_tag=b3621;gene_synonym=ECK3611;gene_synonym=JW3596;gene_synonym=rfaC;gene_synonym=yibC;db_xref=EcoGene:EG11189 EMBL CDS 3795979 3796938 . + 0 ID=.7872;gene=waaC;locus_tag=b3621;gene_synonym=ECK3611;gene_synonym=JW3596;gene_synonym=rfaC;gene_synonym=yibC;ec_number=2.-.-.-;function=enzyme%3B Macromolecule metabolism: Lipopolysaccharide;experiment=N-terminus verified by Edman degradation: PMID 8478319;note=heptosyl transferase I%3B lipopolysaccharide core biosynthesis%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0009244 - lipopolysaccharide core region biosynthetic process;codon_start=1;transl_table=11;product=ADP-heptose:LPS heptosyl transferase I;protein_id=AAC76645.1;db_xref=GI:1790051;db_xref=ASAP:ABE-0011847;db_xref=UniProtKB/Swiss-Prot:P24173;db_xref=EcoGene:EG11189 EMBL gene 3796948 3798207 . + . ID=.7873;gene=waaL;locus_tag=b3622;gene_synonym=ECK3612;gene_synonym=JW3597;gene_synonym=rfaL;db_xref=EcoGene:EG11424 EMBL CDS 3796948 3798207 . + 0 ID=.7874;gene=waaL;locus_tag=b3622;gene_synonym=ECK3612;gene_synonym=JW3597;gene_synonym=rfaL;function=enzyme%3B Macromolecule metabolism: Lipopolysaccharide;note=O-antigen ligase%3B lipopolysaccharide core biosynthesis%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0009244 - lipopolysaccharide core region biosynthetic process;codon_start=1;transl_table=11;product=O-antigen ligase;protein_id=AAC76646.1;db_xref=GI:1790052;db_xref=ASAP:ABE-0011849;db_xref=UniProtKB/Swiss-Prot:P27243;db_xref=EcoGene:EG11424 EMBL gene 3798239 3799312 . - . ID=.7875;gene=waaU;locus_tag=b3623;gene_synonym=ECK3613;gene_synonym=JW3598;gene_synonym=rfaK;gene_synonym=waaK;db_xref=EcoGene:EG11423 EMBL CDS 3798239 3799312 . - 0 ID=.7876;gene=waaU;locus_tag=b3623;gene_synonym=ECK3613;gene_synonym=JW3598;gene_synonym=rfaK;gene_synonym=waaK;function=enzyme%3B Macromolecule metabolism: Lipopolysaccharide;note=probably hexose transferase%3B lipopolysaccharide core biosynthesis%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0009244 - lipopolysaccharide core region biosynthetic process;codon_start=1;transl_table=11;product=lipopolysaccharide core biosynthesis;protein_id=AAC76647.1;db_xref=GI:1790053;db_xref=ASAP:ABE-0011851;db_xref=UniProtKB/Swiss-Prot:P27242;db_xref=EcoGene:EG11423 EMBL gene 3799345 3800196 . - . ID=.7877;gene=waaZ;locus_tag=b3624;gene_synonym=ECK3614;gene_synonym=JW3599;gene_synonym=rfaZ;db_xref=EcoGene:EG11426 EMBL CDS 3799345 3800196 . - 0 ID=.7878;gene=waaZ;locus_tag=b3624;gene_synonym=ECK3614;gene_synonym=JW3599;gene_synonym=rfaZ;function=enzyme%3B Macromolecule metabolism: Lipopolysaccharide;note=lipopolysaccharide core biosynthesis%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0009244 - lipopolysaccharide core region biosynthetic process;codon_start=1;transl_table=11;product=lipopolysaccharide KdoIII transferase%3B lipopolysaccharide core biosynthesis protein;protein_id=AAC76648.1;db_xref=GI:1790054;db_xref=ASAP:ABE-0011854;db_xref=UniProtKB/Swiss-Prot:P27241;db_xref=EcoGene:EG11426 EMBL gene 3800267 3800965 . - . ID=.7879;gene=waaY;locus_tag=b3625;gene_synonym=ECK3615;gene_synonym=JW3600;gene_synonym=rfaY;db_xref=EcoGene:EG11425 EMBL CDS 3800267 3800965 . - 0 ID=.7880;gene=waaY;locus_tag=b3625;gene_synonym=ECK3615;gene_synonym=JW3600;gene_synonym=rfaY;function=enzyme%3B Macromolecule metabolism: Lipopolysaccharide;note=lipopolysaccharide core biosynthesis%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0009244 - lipopolysaccharide core region biosynthetic process;codon_start=1;transl_table=11;product=lipopolysaccharide core biosynthesis protein;protein_id=AAC76649.1;db_xref=GI:1790055;db_xref=ASAP:ABE-0011856;db_xref=UniProtKB/Swiss-Prot:P27240;db_xref=EcoGene:EG11425 EMBL gene 3800983 3801999 . - . ID=.7881;gene=waaR;locus_tag=b3626;gene_synonym=ECK3616;gene_synonym=JW3601;gene_synonym=rfaJ;gene_synonym=rfaN;gene_synonym=waaJ;db_xref=EcoGene:EG11353 EMBL CDS 3800983 3801999 . - 0 ID=.7882;gene=waaR;locus_tag=b3626;gene_synonym=ECK3616;gene_synonym=JW3601;gene_synonym=rfaJ;gene_synonym=rfaN;gene_synonym=waaJ;ec_number=2.4.1.58;function=enzyme%3B Surface polysaccharides %26 antigens;note=GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting;codon_start=1;transl_table=11;product=lipopolysaccharide 1%2C2-glucosyltransferase%3B UDP-glucose:(glucosyl)LPS alpha-1%2C2-glucosyltransferase;protein_id=AAC76650.1;db_xref=GI:1790056;db_xref=ASAP:ABE-0011858;db_xref=UniProtKB/Swiss-Prot:P27129;db_xref=EcoGene:EG11353 EMBL gene 3802039 3803058 . - . ID=.7883;gene=waaO;locus_tag=b3627;gene_synonym=ECK3617;gene_synonym=JW3602;gene_synonym=rfaI;gene_synonym=rfaM;gene_synonym=waaI;db_xref=EcoGene:EG11352 EMBL CDS 3802039 3803058 . - 0 ID=.7884;gene=waaO;locus_tag=b3627;gene_synonym=ECK3617;gene_synonym=JW3602;gene_synonym=rfaI;gene_synonym=rfaM;gene_synonym=waaI;ec_number=2.4.1.44;function=enzyme%3B Surface polysaccharides %26 antigens;note=UDP-D-galactose:(glucosyl)lipopolysaccharide- alpha-1%2C3-D-galactosyltransferase%3B GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting;codon_start=1;transl_table=11;product=UDP-D-galactose:(glucosyl)lipopolysaccharide- alpha-1%2C3-D-galactosyltransferase;protein_id=AAC76651.1;db_xref=GI:1790057;db_xref=ASAP:ABE-0011860;db_xref=UniProtKB/Swiss-Prot:P27128;db_xref=EcoGene:EG11352 EMBL gene 3803058 3804137 . - . ID=.7885;gene=waaB;locus_tag=b3628;gene_synonym=ECK3618;gene_synonym=JW3603;gene_synonym=lps;gene_synonym=phx*;gene_synonym=rfaB;gene_synonym=syn*;db_xref=EcoGene:EG11351 EMBL CDS 3803058 3804137 . - 0 ID=.7886;gene=waaB;locus_tag=b3628;gene_synonym=ECK3618;gene_synonym=JW3603;gene_synonym=lps;gene_synonym=phx*;gene_synonym=rfaB;gene_synonym=syn*;ec_number=2.4.1.-;function=enzyme%3B Surface polysaccharides %26 antigens;note=GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting;codon_start=1;transl_table=11;product=lipopolysaccharide 1%2C6-galactosyltransferase%3B UDP-D-galactose:(glucosyl)lipopolysaccharide-1%2C 6-D-galactosyltransferase;protein_id=AAC76652.2;db_xref=GI:226510984;db_xref=ASAP:ABE-0011862;db_xref=UniProtKB/Swiss-Prot:P27127;db_xref=EcoGene:EG11351 EMBL gene 3804181 3805116 . - . ID=.7887;gene=waaS;locus_tag=b3629;gene_synonym=ECK3619;gene_synonym=JW3604;gene_synonym=rfaS;db_xref=EcoGene:EG11350 EMBL CDS 3804181 3805116 . - 0 ID=.7888;gene=waaS;locus_tag=b3629;gene_synonym=ECK3619;gene_synonym=JW3604;gene_synonym=rfaS;function=enzyme%3B Macromolecule metabolism: Lipopolysaccharide;note=lipopolysaccharide core biosynthesis%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0009244 - lipopolysaccharide core region biosynthetic process;codon_start=1;transl_table=11;product=lipopolysaccharide rhamnose:KdoIII transferase%3B lipopolysaccharide core biosynthesis protein;protein_id=AAC76653.1;db_xref=GI:1790059;db_xref=ASAP:ABE-0011864;db_xref=UniProtKB/Swiss-Prot:P27126;db_xref=EcoGene:EG11350 EMBL gene 3805153 3805950 . - . ID=.7889;gene=waaP;locus_tag=b3630;gene_synonym=ECK3620;gene_synonym=JW3605;gene_synonym=rfaP;db_xref=EcoGene:EG11340 EMBL CDS 3805153 3805950 . - 0 ID=.7890;gene=waaP;locus_tag=b3630;gene_synonym=ECK3620;gene_synonym=JW3605;gene_synonym=rfaP;function=enzyme%3B Macromolecule metabolism: Lipopolysaccharide;note=lipopolysaccharide core biosynthesis%3B phosphorylation of core heptose%3B attaches phosphate-containing substrate to LPS co%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0009244 - lipopolysaccharide core region biosynthetic process;codon_start=1;transl_table=11;product=kinase that phosphorylates core heptose of lipopolysaccharide;protein_id=AAC76654.1;db_xref=GI:1790060;db_xref=ASAP:ABE-0011866;db_xref=UniProtKB/Swiss-Prot:P25741;db_xref=EcoGene:EG11340 EMBL gene 3805943 3807067 . - . ID=.7891;gene=waaG;locus_tag=b3631;gene_synonym=ECK3621;gene_synonym=JW3606;gene_synonym=rfaG;db_xref=EcoGene:EG11339 EMBL CDS 3805943 3807067 . - 0 ID=.7892;gene=waaG;locus_tag=b3631;gene_synonym=ECK3621;gene_synonym=JW3606;gene_synonym=rfaG;ec_number=2.4.1.-;function=enzyme%3B Macromolecule metabolism: Lipopolysaccharide;note=glucosyltransferase I%3B lipopolysaccharide core biosynthesis%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0009244 - lipopolysaccharide core region biosynthetic process%3B GO_process: GO:0009432 - SOS response;codon_start=1;transl_table=11;product=UDP-glucose:(heptosyl)lipopolysaccharide alpha-1%2C3-glucosyltransferase%3B lipopolysaccharide core biosynthesis protein%3B lipopolysaccharide glucosyltransferase I;protein_id=AAC76655.1;db_xref=GI:1790061;db_xref=ASAP:ABE-0011868;db_xref=UniProtKB/Swiss-Prot:P25740;db_xref=EcoGene:EG11339 EMBL gene 3807064 3808098 . - . ID=.7893;gene=waaQ;locus_tag=b3632;gene_synonym=ECK3622;gene_synonym=JW3607;gene_synonym=rfaQ;db_xref=EcoGene:EG11341 EMBL CDS 3807064 3808098 . - 0 ID=.7894;gene=waaQ;locus_tag=b3632;gene_synonym=ECK3622;gene_synonym=JW3607;gene_synonym=rfaQ;function=enzyme%3B Macromolecule metabolism: Lipopolysaccharide;note=lipopolysaccharide core biosynthesis%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0009244 - lipopolysaccharide core region biosynthetic process;codon_start=1;transl_table=11;product=lipopolysaccharide core biosynthesis protein;protein_id=AAC76656.1;db_xref=GI:1790062;db_xref=ASAP:ABE-0011870;db_xref=UniProtKB/Swiss-Prot:P25742;db_xref=EcoGene:EG11341 EMBL gene 3808540 3809817 . + . ID=.7895;gene=waaA;locus_tag=b3633;gene_synonym=ECK3623;gene_synonym=JW3608;gene_synonym=kdtA;db_xref=EcoGene:EG10520 EMBL CDS 3808540 3809817 . + 0 ID=.7896;gene=waaA;locus_tag=b3633;gene_synonym=ECK3623;gene_synonym=JW3608;gene_synonym=kdtA;ec_number=2.-.-.-;function=enzyme%3B Surface polysaccharides %26 antigens;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0009245 - lipid A biosynthetic process%3B GO_process: GO:0009244 - lipopolysaccharide core region biosynthetic process%3B GO_process: GO:0009248 - K antigen biosynthetic process;codon_start=1;transl_table=11;product=3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase);protein_id=AAC76657.1;db_xref=GI:1790064;db_xref=ASAP:ABE-0011873;db_xref=UniProtKB/Swiss-Prot:P0AC75;db_xref=EcoGene:EG10520 EMBL gene 3809825 3810304 . + . ID=.7897;gene=coaD;locus_tag=b3634;gene_synonym=ECK3624;gene_synonym=JW3609;gene_synonym=kdtB;gene_synonym=yicA;db_xref=EcoGene:EG11190 EMBL CDS 3809825 3810304 . + 0 ID=.7898;gene=coaD;locus_tag=b3634;gene_synonym=ECK3624;gene_synonym=JW3609;gene_synonym=kdtB;gene_synonym=yicA;ec_number=2.7.7.3;function=enzyme%3B Not classified;experiment=N-terminus verified by Edman degradation: PMID 10480925;note=GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting;codon_start=1;transl_table=11;product=pantetheine-phosphate adenylyltransferase;protein_id=AAC76658.1;db_xref=GI:1790065;db_xref=ASAP:ABE-0011875;db_xref=UniProtKB/Swiss-Prot:P0A6I6;db_xref=EcoGene:EG11190 EMBL repeat_region 3810312 3810333 . + . ID=.7899;note=REP274 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 3810343 3811152 . - . ID=.7900;gene=mutM;locus_tag=b3635;gene_synonym=ECK3625;gene_synonym=fpg;gene_synonym=JW3610;db_xref=EcoGene:EG10329 EMBL CDS 3810343 3811152 . - 0 ID=.7901;gene=mutM;locus_tag=b3635;gene_synonym=ECK3625;gene_synonym=fpg;gene_synonym=JW3610;ec_number=3.2.2.23;function=enzyme%3B DNA - replication%2C repair%2C restriction/modification;note=formamidopyrimidine DNA glycosylase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006281 - DNA repair;codon_start=1;transl_table=11;product=formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase;protein_id=AAC76659.1;db_xref=GI:1790066;db_xref=ASAP:ABE-0011877;db_xref=UniProtKB/Swiss-Prot:P05523;db_xref=EcoGene:EG10329 EMBL gene 3811250 3811417 . - . ID=.7902;gene=rpmG;locus_tag=b3636;gene_synonym=ECK3626;gene_synonym=JW3611;db_xref=EcoGene:EG10891 EMBL CDS 3811250 3811417 . - 0 ID=.7903;gene=rpmG;locus_tag=b3636;gene_synonym=ECK3626;gene_synonym=JW3611;function=structural component%3B Ribosomal proteins - synthesis%2C modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0003735 - structural constituent of ribosome%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=50S ribosomal subunit protein L33;protein_id=AAC76660.1;db_xref=GI:1790067;db_xref=ASAP:ABE-0011883;db_xref=UniProtKB/Swiss-Prot:P0A7N9;db_xref=EcoGene:EG10891 EMBL gene 3811438 3811674 . - . ID=.7904;gene=rpmB;locus_tag=b3637;gene_synonym=ECK3627;gene_synonym=JW3612;db_xref=EcoGene:EG10886 EMBL CDS 3811438 3811674 . - 0 ID=.7905;gene=rpmB;locus_tag=b3637;gene_synonym=ECK3627;gene_synonym=JW3612;function=structural component%3B Ribosomal proteins - synthesis%2C modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0003735 - structural constituent of ribosome%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=50S ribosomal subunit protein L28;protein_id=AAC76661.1;db_xref=GI:1790068;db_xref=ASAP:ABE-0011885;db_xref=UniProtKB/Swiss-Prot:P0A7M2;db_xref=EcoGene:EG10886 EMBL gene 3811891 3812559 . - . ID=.7906;gene=yicR;locus_tag=b3638;gene_synonym=ECK3628;gene_synonym=JW5643;gene_synonym=radC;db_xref=EcoGene:EG11312 EMBL CDS 3811891 3812559 . - 0 ID=.7907;gene=yicR;locus_tag=b3638;gene_synonym=ECK3628;gene_synonym=JW5643;gene_synonym=radC;function=phenotype%3B Not classified;note=DNA repair protein%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006261 - DNA-dependent DNA replication%3B GO_process: GO:0006281 - DNA repair;codon_start=1;transl_table=11;product=UPF0758 family protein;protein_id=AAC76662.2;db_xref=GI:87082300;db_xref=ASAP:ABE-0011889;db_xref=UniProtKB/Swiss-Prot:P25531;db_xref=EcoGene:EG11312 EMBL gene 3812731 3813951 . + . ID=.7908;gene=dfp;locus_tag=b3639;gene_synonym=coaBC;gene_synonym=ECK3629;gene_synonym=JW5642;db_xref=EcoGene:EG10004 EMBL CDS 3812731 3813951 . + 0 ID=.7909;gene=dfp;locus_tag=b3639;gene_synonym=coaBC;gene_synonym=ECK3629;gene_synonym=JW5642;ec_number=4.1.1.36;ec_number=6.3.2.5;function=phenotype%3B DNA - replication%2C repair%2C restriction/modification;note=flavoprotein affecting synthesis of DNA and pantothenate metabolism%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0015937 - coenzyme A biosynthetic process%3B GO_process: GO:0006261 - DNA-dependent DNA replication;codon_start=1;transl_table=11;product=fused 4'-phosphopantothenoylcysteine decarboxylase/phosphopantothenoylcysteine synthetase%2C FMN-binding;protein_id=AAC76663.2;db_xref=GI:87082301;db_xref=ASAP:ABE-0011896;db_xref=UniProtKB/Swiss-Prot:P0ABQ0;db_xref=EcoGene:EG10004 EMBL gene 3813932 3814387 . + . ID=.7910;gene=dut;locus_tag=b3640;gene_synonym=dnaS;gene_synonym=ECK3630;gene_synonym=JW3615;gene_synonym=sof;db_xref=EcoGene:EG10251 EMBL CDS 3813932 3814387 . + 0 ID=.7911;gene=dut;locus_tag=b3640;gene_synonym=dnaS;gene_synonym=ECK3630;gene_synonym=JW3615;gene_synonym=sof;ec_number=3.6.1.23;function=enzyme%3B 2'-Deoxyribonucleotide metabolism;note=GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion;codon_start=1;transl_table=11;product=deoxyuridinetriphosphatase;protein_id=AAC76664.1;db_xref=GI:1790071;db_xref=ASAP:ABE-0011899;db_xref=UniProtKB/Swiss-Prot:P06968;db_xref=EcoGene:EG10251 EMBL gene 3814494 3815090 . + . ID=.7912;gene=slmA;locus_tag=b3641;gene_synonym=ECK3631;gene_synonym=JW5641;gene_synonym=ttk;gene_synonym=yicB;db_xref=EcoGene:EG11191 EMBL CDS 3814494 3815090 . + 0 ID=.7913;gene=slmA;locus_tag=b3641;gene_synonym=ECK3631;gene_synonym=JW5641;gene_synonym=ttk;gene_synonym=yicB;function=putative regulator%3B Not classified;note=putative transcriptional regulator%3B GO_function: GO:0016563 - transcription activator activity%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=nucleoid occlusion factor%2C anti-FtsZ division inhibitor;protein_id=AAC76665.2;db_xref=GI:87082302;db_xref=ASAP:ABE-0011902;db_xref=UniProtKB/Swiss-Prot:P0C093;db_xref=EcoGene:EG11191 EMBL repeat_region 3815097 3815118 . + . ID=.7914;note=REP275 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 3815127 3815768 . - . ID=.7915;gene=pyrE;locus_tag=b3642;gene_synonym=ECK3632;gene_synonym=JW3617;db_xref=EcoGene:EG10808 EMBL CDS 3815127 3815768 . - 0 ID=.7916;gene=pyrE;locus_tag=b3642;gene_synonym=ECK3632;gene_synonym=JW3617;ec_number=2.4.2.10;function=enzyme%3B Pyrimidine ribonucleotide biosynthesis;experiment=N-terminus verified by Edman degradation: PMID 6349999;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006221 - pyrimidine nucleotide biosynthetic process;codon_start=1;transl_table=11;product=orotate phosphoribosyltransferase;protein_id=AAC76666.1;db_xref=GI:1790073;db_xref=ASAP:ABE-0011904;db_xref=UniProtKB/Swiss-Prot:P0A7E3;db_xref=EcoGene:EG10808 EMBL gene 3815834 3816549 . - . ID=.7917;gene=rph;locus_tag=b3643;gene_synonym=ECK3633;gene_synonym=JW3618;gene_synonym=orfE;pseudo=true;db_xref=EcoGene:EG10863 EMBL biological_region 3815834 3816549 . - 0 ID=.7918;featflags=type:CDS;gene=rph;locus_tag=b3643;gene_synonym=ECK3633;gene_synonym=JW3618;gene_synonym=orfE;experiment=N-terminus verified by Edman degradation: PMID 1885537;note=ribonuclease PH (defective)%3Benzyme%3B Degradation of RNA%3B RNase PH%3B GO_process: GO:0006401 - RNA catabolic process;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0011909;db_xref=UniProtKB/Swiss-Prot:P0CG19;db_xref=EcoGene:EG10863 EMBL CDS 3815834 3815881 . - 0 Parent=.7918 EMBL CDS 3815881 3816549 . - 0 Parent=.7918 EMBL gene 3816676 3817539 . + . ID=.7921;gene=yicC;locus_tag=b3644;gene_synonym=ECK3634;gene_synonym=JW3619;gene_synonym=orfX;db_xref=EcoGene:EG11192 EMBL CDS 3816676 3817539 . + 0 ID=.7922;gene=yicC;locus_tag=b3644;gene_synonym=ECK3634;gene_synonym=JW3619;gene_synonym=orfX;function=phenotype%3B Not classified;note=putative alpha helix protein;codon_start=1;transl_table=11;product=UPF0701 family protein;protein_id=AAC76668.1;db_xref=GI:1790075;db_xref=ASAP:ABE-0011913;db_xref=UniProtKB/Swiss-Prot:P23839;db_xref=EcoGene:EG11192 EMBL gene 3817760 3818584 . + . ID=.7923;gene=dinD;locus_tag=b3645;gene_synonym=ECK3635;gene_synonym=JW3620;gene_synonym=orfY;gene_synonym=pcsA;gene_synonym=yicD;db_xref=EcoGene:EG11193 EMBL CDS 3817760 3818584 . + 0 ID=.7924;gene=dinD;locus_tag=b3645;gene_synonym=ECK3635;gene_synonym=JW3620;gene_synonym=orfY;gene_synonym=pcsA;gene_synonym=yicD;function=phenotype%3B DNA - replication%2C repair%2C restriction/modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006281 - DNA repair;codon_start=1;transl_table=11;product=DNA damage-inducible protein;protein_id=AAC76669.2;db_xref=GI:87082303;db_xref=ASAP:ABE-0011918;db_xref=UniProtKB/Swiss-Prot:P23840;db_xref=EcoGene:EG11193 EMBL gene 3818874 3819491 . + . ID=.7925;gene=yicG;locus_tag=b3646;gene_synonym=ECK3636;gene_synonym=JW3621;db_xref=EcoGene:EG11683 EMBL CDS 3818874 3819491 . + 0 ID=.7926;gene=yicG;locus_tag=b3646;gene_synonym=ECK3636;gene_synonym=JW3621;codon_start=1;transl_table=11;product=UPF0126 family inner membrane protein;protein_id=AAC76670.2;db_xref=GI:87082304;db_xref=ASAP:ABE-0011921;db_xref=UniProtKB/Swiss-Prot:P0AGM2;db_xref=EcoGene:EG11683 EMBL gene 3819488 3821170 . - . ID=.7927;gene=ligB;locus_tag=b3647;gene_synonym=ECK3637;gene_synonym=JW3622;gene_synonym=yicF;db_xref=EcoGene:EG11334 EMBL CDS 3819488 3821170 . - 0 ID=.7928;gene=ligB;locus_tag=b3647;gene_synonym=ECK3637;gene_synonym=JW3622;gene_synonym=yicF;function=putative enzyme%3B Not classified;note=putative enzyme%3B GO_process: GO:0006259 - DNA metabolic process;codon_start=1;transl_table=11;product=DNA ligase%2C NAD(+)-dependent;protein_id=AAC76671.2;db_xref=GI:87082305;db_xref=ASAP:ABE-0011923;db_xref=UniProtKB/Swiss-Prot:P25772;db_xref=EcoGene:EG11334 EMBL gene 3821428 3822051 . + . ID=.7929;gene=gmk;locus_tag=b3648;gene_synonym=ECK3638;gene_synonym=JW3623;gene_synonym=spoR;db_xref=EcoGene:EG10965 EMBL CDS 3821428 3822051 . + 0 ID=.7930;gene=gmk;locus_tag=b3648;gene_synonym=ECK3638;gene_synonym=JW3623;gene_synonym=spoR;ec_number=2.7.4.8;function=enzyme%3B Purine ribonucleotide biosynthesis;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion%3B GO_process: GO:0009152 - purine ribonucleotide biosynthetic process;codon_start=1;transl_table=11;product=guanylate kinase;protein_id=AAC76672.1;db_xref=GI:1790080;db_xref=ASAP:ABE-0011930;db_xref=UniProtKB/Swiss-Prot:P60546;db_xref=EcoGene:EG10965 EMBL gene 3822106 3822381 . + . ID=.7931;gene=rpoZ;locus_tag=b3649;gene_synonym=ECK3639;gene_synonym=JW3624;gene_synonym=spoS;db_xref=EcoGene:EG10899 EMBL CDS 3822106 3822381 . + 0 ID=.7932;gene=rpoZ;locus_tag=b3649;gene_synonym=ECK3639;gene_synonym=JW3624;gene_synonym=spoS;ec_number=2.7.7.6;function=enzyme%3B RNA synthesis%2C modification%2C DNA transcription;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=RNA polymerase%2C omega subunit;protein_id=AAC76673.1;db_xref=GI:1790081;db_xref=ASAP:ABE-0011933;db_xref=UniProtKB/Swiss-Prot:P0A800;db_xref=EcoGene:EG10899 EMBL gene 3822400 3824508 . + . ID=.7933;gene=spoT;locus_tag=b3650;gene_synonym=ECK3640;gene_synonym=JW3625;db_xref=EcoGene:EG10966 EMBL CDS 3822400 3824508 . + 0 ID=.7934;gene=spoT;locus_tag=b3650;gene_synonym=ECK3640;gene_synonym=JW3625;ec_number=2.7.6.5;ec_number=3.1.7.2;function=enzyme%3B Global regulatory functions;note=(p)ppGpp synthetase II%3B also guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0008233 - peptidase activity%3B GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion%3B GO_process: GO:0042594 - response to starvation;codon_start=1;transl_table=11;product=bifunctional (p)ppGpp synthetase II/ guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=AAC76674.1;db_xref=GI:1790082;db_xref=ASAP:ABE-0011935;db_xref=UniProtKB/Swiss-Prot:P0AG24;db_xref=EcoGene:EG10966 EMBL gene 3824515 3825204 . + . ID=.7935;gene=trmH;locus_tag=b3651;gene_synonym=ECK3641;gene_synonym=JW3626;gene_synonym=spoU;db_xref=EcoGene:EG10967 EMBL CDS 3824515 3825204 . + 0 ID=.7936;gene=trmH;locus_tag=b3651;gene_synonym=ECK3641;gene_synonym=JW3626;gene_synonym=spoU;function=enzyme%3B tRNA modification;note=GO_process: GO:0009451 - RNA modification;codon_start=1;transl_table=11;product=tRNA mG18-2'-O-methyltransferase%2C SAM-dependent;protein_id=AAC76675.1;db_xref=GI:1790083;db_xref=ASAP:ABE-0011937;db_xref=UniProtKB/Swiss-Prot:P0AGJ2;db_xref=EcoGene:EG10967 EMBL gene 3825210 3827291 . + . ID=.7937;gene=recG;locus_tag=b3652;gene_synonym=ECK3642;gene_synonym=JW3627;gene_synonym=radC;gene_synonym=spoV;db_xref=EcoGene:EG10829 EMBL CDS 3825210 3827291 . + 0 ID=.7938;gene=recG;locus_tag=b3652;gene_synonym=ECK3642;gene_synonym=JW3627;gene_synonym=radC;gene_synonym=spoV;ec_number=3.6.1.-;function=enzyme%3B DNA - replication%2C repair%2C restriction/modification;note=DNA helicase%2C resolution of Holliday junctions%2C branch migration%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006261 - DNA-dependent DNA replication;codon_start=1;transl_table=11;product=ATP-dependent DNA helicase;protein_id=AAC76676.1;db_xref=GI:2367254;db_xref=ASAP:ABE-0011939;db_xref=UniProtKB/Swiss-Prot:P24230;db_xref=EcoGene:EG10829 EMBL repeat_region 3827338 3827416 . + . ID=.7939;note=RIP276 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 3827460 3828665 . - . ID=.7940;gene=gltS;locus_tag=b3653;gene_synonym=ECK3643;gene_synonym=gltC;gene_synonym=JW3628;db_xref=EcoGene:EG10406 EMBL CDS 3827460 3828665 . - 0 ID=.7941;gene=gltS;locus_tag=b3653;gene_synonym=ECK3643;gene_synonym=gltC;gene_synonym=JW3628;function=transport%3B Transport of small molecules: Amino acids%2C amines;note=glutamate transport%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006537 - glutamate biosynthetic process%3B GO_process: GO:0006532 - aspartate biosynthetic process;codon_start=1;transl_table=11;product=glutamate transporter;protein_id=AAC76677.1;db_xref=GI:1790085;db_xref=ASAP:ABE-0011941;db_xref=UniProtKB/Swiss-Prot:P0AER8;db_xref=EcoGene:EG10406 EMBL gene 3828945 3830336 . + . ID=.7942;gene=xanP;locus_tag=b3654;gene_synonym=ECK3644;gene_synonym=JW3629;gene_synonym=yicE;db_xref=EcoGene:EG11194 EMBL CDS 3828945 3830336 . + 0 ID=.7943;gene=xanP;locus_tag=b3654;gene_synonym=ECK3644;gene_synonym=JW3629;gene_synonym=yicE;function=transport%3B Transport of small molecules: Nucleosides%2C purines%2C pyrimidines;note=putative transport protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=xanthine permease;protein_id=AAC76678.1;db_xref=GI:1790087;db_xref=ASAP:ABE-0011946;db_xref=UniProtKB/Swiss-Prot:P0AGM9;db_xref=EcoGene:EG11194 EMBL gene 3830457 3832166 . + . ID=.7944;gene=yicH;locus_tag=b3655;gene_synonym=ECK3645;gene_synonym=JW3630;db_xref=EcoGene:EG11684 EMBL CDS 3830457 3832166 . + 0 ID=.7945;gene=yicH;locus_tag=b3655;gene_synonym=ECK3645;gene_synonym=JW3630;codon_start=1;transl_table=11;product=putative inner membrane-anchored periplasmic AsmA family protein;protein_id=AAC76679.1;db_xref=GI:1790088;db_xref=ASAP:ABE-0011949;db_xref=UniProtKB/Swiss-Prot:P31433;db_xref=EcoGene:EG11684 EMBL repeat_region 3832178 3832204 . + . ID=.7946;note=REP277 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 3832219 3834537 . - . ID=.7947;gene=yicI;locus_tag=b3656;gene_synonym=ECK3646;gene_synonym=JW3631;db_xref=EcoGene:EG11685 EMBL CDS 3832219 3834537 . - 0 ID=.7948;gene=yicI;locus_tag=b3656;gene_synonym=ECK3646;gene_synonym=JW3631;codon_start=1;transl_table=11;product=putative alpha-glucosidase;protein_id=AAC76680.1;db_xref=GI:2367256;db_xref=ASAP:ABE-0011951;db_xref=UniProtKB/Swiss-Prot:P31434;db_xref=EcoGene:EG11685 EMBL gene 3834547 3835929 . - . ID=.7949;gene=yicJ;locus_tag=b3657;gene_synonym=ECK3647;gene_synonym=JW5939;db_xref=EcoGene:EG11686 EMBL CDS 3834547 3835929 . - 0 ID=.7950;gene=yicJ;locus_tag=b3657;gene_synonym=ECK3647;gene_synonym=JW5939;function=putative transport%3B Not classified;note=putative permease%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative transporter;protein_id=AAC76681.2;db_xref=GI:87082306;db_xref=ASAP:ABE-0011953;db_xref=UniProtKB/Swiss-Prot:P31435;db_xref=EcoGene:EG11686 EMBL gene 3836222 3836316 . + . ID=.7951;gene=selC;locus_tag=b3658;gene_synonym=ECK3648;gene_synonym=fdhC;gene_synonym=JWR0081;db_xref=EcoGene:EG30092 EMBL tRNA 3836222 3836316 . + . ID=.7952;gene=selC;locus_tag=b3658;gene_synonym=ECK3648;gene_synonym=fdhC;gene_synonym=JWR0081;product=tRNA-Sec;db_xref=ASAP:ABE-0011956;db_xref=EcoGene:EG30092 EMBL gene 3836425 3836556 . + . ID=.7953;gene=yicT;locus_tag=b4653;gene_synonym=ECK4456;gene_synonym=erhM;gene_synonym=rhuM;pseudo=true;db_xref=EcoGene:EG14448 EMBL CDS 3836425 3836556 . + 0 ID=.7954;gene=yicT;locus_tag=b4653;gene_synonym=ECK4456;gene_synonym=erhM;gene_synonym=rhuM;note=pseudogene;pseudo=true;codon_start=1;transl_table=11;db_xref=EcoGene:EG14448 EMBL gene 3836953 3838137 . + . ID=.7955;gene=setC;locus_tag=b3659;gene_synonym=ECK3649;gene_synonym=JW3633;gene_synonym=yicK;db_xref=EcoGene:EG11687 EMBL CDS 3836953 3838137 . + 0 ID=.7956;gene=setC;locus_tag=b3659;gene_synonym=ECK3649;gene_synonym=JW3633;gene_synonym=yicK;function=putative transport%3B Not classified;note=two-module transport protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative arabinose efflux transporter;protein_id=AAC76682.1;db_xref=GI:1790091;db_xref=ASAP:ABE-0011959;db_xref=UniProtKB/Swiss-Prot:P31436;db_xref=EcoGene:EG11687 EMBL gene 3838248 3839171 . + . ID=.7957;gene=yicL;locus_tag=b3660;gene_synonym=ECK3650;gene_synonym=JW3634;db_xref=EcoGene:EG11688 EMBL CDS 3838248 3839171 . + 0 ID=.7958;gene=yicL;locus_tag=b3660;gene_synonym=ECK3650;gene_synonym=JW3634;function=putative transport%3B Not classified;note=putative permease transporter%3B GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=EamA family inner membrane putative transporter;protein_id=AAC76683.1;db_xref=GI:1790092;db_xref=ASAP:ABE-0011962;db_xref=UniProtKB/Swiss-Prot:P31437;db_xref=EcoGene:EG11688 EMBL gene 3839175 3839993 . - . ID=.7959;gene=nlpA;locus_tag=b3661;gene_synonym=ECK3651;gene_synonym=JW3635;db_xref=EcoGene:EG10657 EMBL CDS 3839175 3839993 . - 0 ID=.7960;gene=nlpA;locus_tag=b3661;gene_synonym=ECK3651;gene_synonym=JW3635;function=membrane%3B Macromolecule synthesis%2C modification: Lipoprotein;note=lipoprotein-28%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=cytoplasmic membrane lipoprotein-28;protein_id=AAC76684.1;db_xref=GI:1790093;db_xref=ASAP:ABE-0011964;db_xref=UniProtKB/Swiss-Prot:P04846;db_xref=EcoGene:EG10657 EMBL gene 3840215 3840508 . + . ID=.7961;gene=yicS;locus_tag=b4555;gene_synonym=ECK3652;gene_synonym=JW5965;db_xref=EcoGene:EG14429 EMBL CDS 3840215 3840508 . + 0 ID=.7962;gene=yicS;locus_tag=b4555;gene_synonym=ECK3652;gene_synonym=JW5965;codon_start=1;transl_table=11;product=putative periplasmic protein;protein_id=ABD18705.1;db_xref=GI:87082307;db_xref=ASAP:ABE-0285076;db_xref=UniProtKB/Swiss-Prot:Q2M7X4;db_xref=EcoGene:EG14429 EMBL gene 3840549 3841739 . - . ID=.7963;gene=nepI;locus_tag=b3662;gene_synonym=ECK3653;gene_synonym=gaiA;gene_synonym=JW5938;gene_synonym=yicM;db_xref=EcoGene:EG11689 EMBL CDS 3840549 3841739 . - 0 ID=.7964;gene=nepI;locus_tag=b3662;gene_synonym=ECK3653;gene_synonym=gaiA;gene_synonym=JW5938;gene_synonym=yicM;function=putative transport%3B Not classified;note=putative transport protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative transporter;protein_id=AAC76685.2;db_xref=GI:145693198;db_xref=ASAP:ABE-0011967;db_xref=UniProtKB/Swiss-Prot:P0ADL1;db_xref=EcoGene:EG11689 EMBL repeat_region 3841876 3841944 . + . ID=.7965;note=REP278 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 3841950 3842402 . - . ID=.7966;gene=yicN;locus_tag=b3663;gene_synonym=ECK3654;gene_synonym=JW5637;db_xref=EcoGene:EG11690 EMBL CDS 3841950 3842402 . - 0 ID=.7967;gene=yicN;locus_tag=b3663;gene_synonym=ECK3654;gene_synonym=JW5637;codon_start=1;transl_table=11;product=DUF1198 family protein;protein_id=AAC76686.2;db_xref=GI:87082308;db_xref=ASAP:ABE-0011972;db_xref=UniProtKB/Swiss-Prot:P0ADL3;db_xref=EcoGene:EG11690 EMBL gene 3842455 3843789 . - . ID=.7968;gene=adeQ;locus_tag=b3664;gene_synonym=ECK3655;gene_synonym=JW5636;gene_synonym=pbuA;gene_synonym=yicO;db_xref=EcoGene:EG11691 EMBL CDS 3842455 3843789 . - 0 ID=.7969;gene=adeQ;locus_tag=b3664;gene_synonym=ECK3655;gene_synonym=JW5636;gene_synonym=pbuA;gene_synonym=yicO;function=transport%3B Transport of small molecules: Nucleosides%2C purines%2C pyrimidines;codon_start=1;transl_table=11;product=adenine permease%2C high affinity%3B adenine:H+ symporter;protein_id=AAC76687.2;db_xref=GI:87082309;db_xref=ASAP:ABE-0011975;db_xref=UniProtKB/Swiss-Prot:P31440;db_xref=EcoGene:EG11691 EMBL gene 3843964 3845730 . + . ID=.7970;gene=adeD;locus_tag=b3665;gene_synonym=ade;gene_synonym=adeC;gene_synonym=adu;gene_synonym=ECK3656;gene_synonym=JW3640;gene_synonym=yicP;db_xref=EcoGene:EG11692 EMBL CDS 3843964 3845730 . + 0 ID=.7971;gene=adeD;locus_tag=b3665;gene_synonym=ade;gene_synonym=adeC;gene_synonym=adu;gene_synonym=ECK3656;gene_synonym=JW3640;gene_synonym=yicP;ec_number=3.5.4.2;function=putative enzyme%3B Purine ribonucleotide biosynthesis;note=GO_process: GO:0008152 - metabolic process;codon_start=1;transl_table=11;product=cryptic adenine deaminase;protein_id=AAC76688.1;db_xref=GI:1790098;db_xref=ASAP:ABE-0011979;db_xref=UniProtKB/Swiss-Prot:P31441;db_xref=EcoGene:EG11692 EMBL gene 3845776 3847167 . - . ID=.7972;gene=uhpT;locus_tag=b3666;gene_synonym=ECK3657;gene_synonym=JW3641;db_xref=EcoGene:EG11054 EMBL CDS 3845776 3847167 . - 0 ID=.7973;gene=uhpT;locus_tag=b3666;gene_synonym=ECK3657;gene_synonym=JW3641;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=hexose phosphate transport protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=hexose phosphate transporter;protein_id=AAC76689.1;db_xref=GI:2367259;db_xref=ASAP:ABE-0011981;db_xref=UniProtKB/Swiss-Prot:P0AGC0;db_xref=EcoGene:EG11054 EMBL gene 3847305 3848624 . - . ID=.7974;gene=uhpC;locus_tag=b3667;gene_synonym=ECK3658;gene_synonym=JW3642;db_xref=EcoGene:EG11053 EMBL CDS 3847305 3848624 . - 0 ID=.7975;gene=uhpC;locus_tag=b3667;gene_synonym=ECK3658;gene_synonym=JW3642;function=regulator%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=regulator of uhpT%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=membrane protein regulates uhpT expression;protein_id=AAC76690.2;db_xref=GI:87082310;db_xref=ASAP:ABE-0011990;db_xref=UniProtKB/Swiss-Prot:P09836;db_xref=EcoGene:EG11053 EMBL gene 3848634 3850136 . - . ID=.7976;gene=uhpB;locus_tag=b3668;gene_synonym=ECK3659;gene_synonym=JW3643;db_xref=EcoGene:EG11052 EMBL CDS 3848634 3850136 . - 0 ID=.7977;gene=uhpB;locus_tag=b3668;gene_synonym=ECK3659;gene_synonym=JW3643;function=enzyme%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=sensor histidine protein kinase phosphorylates UhpA%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=sensory histidine kinase in two-component regulatory sytem with UhpA;protein_id=AAC76691.2;db_xref=GI:87082311;db_xref=ASAP:ABE-0011993;db_xref=UniProtKB/Swiss-Prot:P09835;db_xref=EcoGene:EG11052 EMBL gene 3850136 3850726 . - . ID=.7978;gene=uhpA;locus_tag=b3669;gene_synonym=ECK3660;gene_synonym=JW3644;db_xref=EcoGene:EG11051 EMBL CDS 3850136 3850726 . - 0 ID=.7979;gene=uhpA;locus_tag=b3669;gene_synonym=ECK3660;gene_synonym=JW3644;function=regulator%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;experiment=N-terminus verified by Edman degradation: PMID 8999880;note=response regulator%2C positive activator of uhpT transcription (sensor%2C uhpB)%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=response regulator in two-component regulatory system wtih UhpB;protein_id=AAC76692.1;db_xref=GI:1790102;db_xref=ASAP:ABE-0011995;db_xref=UniProtKB/Swiss-Prot:P0AGA6;db_xref=EcoGene:EG11051 EMBL gene 3850802 3851092 . - . ID=.7980;gene=ilvN;locus_tag=b3670;gene_synonym=ECK3661;gene_synonym=JW3645;db_xref=EcoGene:EG10502 EMBL CDS 3850802 3851092 . - 0 ID=.7981;gene=ilvN;locus_tag=b3670;gene_synonym=ECK3661;gene_synonym=JW3645;ec_number=2.2.1.6;function=enzyme%3B Amino acid biosynthesis: Isoleucine%2C Valine;note=acetolactate synthase I%2C valine sensitive%2C small subunit;codon_start=1;transl_table=11;product=acetolactate synthase 1 small subunit;protein_id=AAC76693.1;db_xref=GI:1790103;db_xref=ASAP:ABE-0011997;db_xref=UniProtKB/Swiss-Prot:P0ADF8;db_xref=EcoGene:EG10502 EMBL gene 3851096 3852784 . - . ID=.7982;gene=ilvB;locus_tag=b3671;gene_synonym=ECK3662;gene_synonym=JW3646;db_xref=EcoGene:EG10494 EMBL CDS 3851096 3852784 . - 0 ID=.7983;gene=ilvB;locus_tag=b3671;gene_synonym=ECK3662;gene_synonym=JW3646;ec_number=2.2.1.6;function=enzyme%3B Amino acid biosynthesis: Isoleucine%2C Valine;note=acetolactate synthase I%2Cvaline-sensitive%2C large subunit;codon_start=1;transl_table=11;product=acetolactate synthase 2 large subunit;protein_id=AAC76694.1;db_xref=GI:1790104;db_xref=ASAP:ABE-0011999;db_xref=UniProtKB/Swiss-Prot:P08142;db_xref=EcoGene:EG10494 EMBL gene 3852890 3852988 . - . ID=.7984;gene=ivbL;locus_tag=b3672;gene_synonym=ECK3663;gene_synonym=JW3647;db_xref=EcoGene:EG11275 EMBL CDS 3852890 3852988 . - 0 ID=.7985;gene=ivbL;locus_tag=b3672;gene_synonym=ECK3663;gene_synonym=JW3647;function=leader%3B Amino acid biosynthesis: Isoleucine%2C Valine;note=GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=ilvB operon leader peptide;protein_id=AAC76695.1;db_xref=GI:1790106;db_xref=ASAP:ABE-0012002;db_xref=UniProtKB/Swiss-Prot:P03061;db_xref=EcoGene:EG11275 EMBL gene 3853118 3853257 . - . ID=.7986;gene=istR;locus_tag=b4616;gene_synonym=ECK4425;gene_synonym=psr19;gene_synonym=psrA19;db_xref=EcoGene:EG31167 EMBL ncRNA 3853118 3853257 . - . ID=.7987;ncrna_class=antisense_RNA;gene=istR;locus_tag=b4616;gene_synonym=ECK4425;gene_synonym=psr19;gene_synonym=psrA19;product=sRNA antisense regulators IstR-1 and IstR-2%2C affectr tisB%2C Hfq-dependent;db_xref=EcoGene:EG31167 EMBL gene 3853553 3853642 . + . ID=.7988;gene=tisB;locus_tag=b4618;gene_synonym=ECK4427;gene_synonym=ysdA;gene_synonym=ysdB;db_xref=EcoGene:EG14402 EMBL CDS 3853553 3853642 . + 0 ID=.7989;gene=tisB;locus_tag=b4618;gene_synonym=ECK4427;gene_synonym=ysdA;gene_synonym=ysdB;codon_start=1;transl_table=11;product=toxic membrane persister formation peptide%2C LexA-regulated;protein_id=ABP93456.1;db_xref=GI:145693200;db_xref=UniProtKB/Swiss-Prot:A5A627;db_xref=EcoGene:EG14402 EMBL repeat_region 3853712 3853747 . + . ID=.7990;note=REP279 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 3853922 3855106 . + . ID=.7991;gene=emrD;locus_tag=b3673;gene_synonym=ECK3664;gene_synonym=JW5634;gene_synonym=yicQ;db_xref=EcoGene:EG11693 EMBL CDS 3853922 3855106 . + 0 ID=.7992;gene=emrD;locus_tag=b3673;gene_synonym=ECK3664;gene_synonym=JW5634;gene_synonym=yicQ;function=transport%3B Drug/analog sensitivity;note=2-module integral membrane pump%3B multidrug resistance%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=multidrug efflux system protein;protein_id=AAC76696.2;db_xref=GI:87082312;db_xref=ASAP:ABE-0012011;db_xref=UniProtKB/Swiss-Prot:P31442;db_xref=EcoGene:EG11693 EMBL gene 3855114 3855611 . - . ID=.7993;gene=yidF;locus_tag=b3674;gene_synonym=ECK3665;gene_synonym=JW3650;db_xref=EcoGene:EG11694 EMBL CDS 3855114 3855611 . - 0 ID=.7994;gene=yidF;locus_tag=b3674;gene_synonym=ECK3665;gene_synonym=JW3650;function=putative enzyme%3B Not classified;note=putative transcriptional regulator;codon_start=1;transl_table=11;product=putative Cys-type oxidative YidJ-maturating enzyme;protein_id=AAC76697.1;db_xref=GI:1790108;db_xref=ASAP:ABE-0012013;db_xref=UniProtKB/Swiss-Prot:P31443;db_xref=EcoGene:EG11694 EMBL gene 3855608 3855970 . - . ID=.7995;gene=yidG;locus_tag=b3675;gene_synonym=ECK3666;gene_synonym=JW3651;db_xref=EcoGene:EG11695 EMBL CDS 3855608 3855970 . - 0 ID=.7996;gene=yidG;locus_tag=b3675;gene_synonym=ECK3666;gene_synonym=JW3651;codon_start=1;transl_table=11;product=inner membrane protein;protein_id=AAC76698.1;db_xref=GI:1790109;db_xref=ASAP:ABE-0012015;db_xref=UniProtKB/Swiss-Prot:P0ADL6;db_xref=EcoGene:EG11695 EMBL gene 3855960 3856307 . - . ID=.7997;gene=yidH;locus_tag=b3676;gene_synonym=ECK3667;gene_synonym=JW3652;db_xref=EcoGene:EG11696 EMBL CDS 3855960 3856307 . - 0 ID=.7998;gene=yidH;locus_tag=b3676;gene_synonym=ECK3667;gene_synonym=JW3652;codon_start=1;transl_table=11;product=DUF202 family inner membrane protein;protein_id=AAC76699.1;db_xref=GI:1790110;db_xref=ASAP:ABE-0012018;db_xref=UniProtKB/Swiss-Prot:P0ADM0;db_xref=EcoGene:EG11696 EMBL gene 3856415 3856864 . + . ID=.7999;gene=yidI;locus_tag=b3677;gene_synonym=ECK3668;gene_synonym=JW3653;db_xref=EcoGene:EG11697 EMBL CDS 3856415 3856864 . + 0 ID=.8000;gene=yidI;locus_tag=b3677;gene_synonym=ECK3668;gene_synonym=JW3653;codon_start=1;transl_table=11;product=inner membrane protein;protein_id=AAC76700.1;db_xref=GI:1790111;db_xref=ASAP:ABE-0012022;db_xref=UniProtKB/Swiss-Prot:P31446;db_xref=EcoGene:EG11697 EMBL gene 3856911 3858404 . - . ID=.8001;gene=yidJ;locus_tag=b3678;gene_synonym=ECK3669;gene_synonym=JW3654;db_xref=EcoGene:EG11705 EMBL CDS 3856911 3858404 . - 0 ID=.8002;gene=yidJ;locus_tag=b3678;gene_synonym=ECK3669;gene_synonym=JW3654;function=putative enzyme%3B Not classified;note=putative sulfatase%3B GO_process: GO:0006790 - sulfur metabolic process;codon_start=1;transl_table=11;product=sulfatase/phosphatase superfamily protein;protein_id=AAC76701.1;db_xref=GI:1790112;db_xref=ASAP:ABE-0012024;db_xref=UniProtKB/Swiss-Prot:P31447;db_xref=EcoGene:EG11705 EMBL gene 3858401 3860116 . - . ID=.8003;gene=yidK;locus_tag=b3679;gene_synonym=ECK3670;gene_synonym=JW3655;db_xref=EcoGene:EG11706 EMBL CDS 3858401 3860116 . - 0 ID=.8004;gene=yidK;locus_tag=b3679;gene_synonym=ECK3670;gene_synonym=JW3655;function=putative transport%3B Not classified;note=putative cotransporter%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative transporter;protein_id=AAC76702.1;db_xref=GI:1790113;db_xref=ASAP:ABE-0012026;db_xref=UniProtKB/Swiss-Prot:P31448;db_xref=EcoGene:EG11706 EMBL gene 3860283 3861176 . + . ID=.8005;gene=yidL;locus_tag=b3680;gene_synonym=ECK3671;gene_synonym=JW3656;db_xref=EcoGene:EG11707 EMBL CDS 3860283 3861176 . + 0 ID=.8006;gene=yidL;locus_tag=b3680;gene_synonym=ECK3671;gene_synonym=JW3656;function=putative regulator%3B Not classified;note=putative ARAC-type regulatory protein%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=AraC family putative transcriptional regulator;protein_id=AAC76703.2;db_xref=GI:226510985;db_xref=ASAP:ABE-0012034;db_xref=UniProtKB/Swiss-Prot:P31449;db_xref=EcoGene:EG11707 EMBL gene 3861173 3861987 . - . ID=.8007;gene=glvG;locus_tag=b4556;gene_synonym=ECK3673;gene_synonym=JW3658;gene_synonym=yidM;gene_synonym=ysdC;pseudo=true;db_xref=EcoGene:EG11708 EMBL CDS 3861173 3861987 . - 0 ID=.8008;gene=glvG;locus_tag=b4556;gene_synonym=ECK3673;gene_synonym=JW3658;gene_synonym=yidM;gene_synonym=ysdC;note=pseudogene%3B probable 6-phospho-beta-glucosidase%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0009435 - NAD biosynthetic process;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0012036;db_xref=ASAP:ABE-0285077;db_xref=UniProtKB/Swiss-Prot:P31450;db_xref=EcoGene:EG11708 EMBL gene 3861987 3863603 . - . ID=.8009;gene=glvC;locus_tag=b3683;gene_synonym=ECK3674;gene_synonym=glvB;gene_synonym=JW3659;gene_synonym=yidN;gene_synonym=yidO;pseudo=true;db_xref=EcoGene:EG11710 EMBL CDS 3861987 3863603 . - 0 ID=.8010;gene=glvC;locus_tag=b3683;gene_synonym=ECK3674;gene_synonym=glvB;gene_synonym=JW3659;gene_synonym=yidN;gene_synonym=yidO;note=pseudogene%2C arbutin specific enzyme IIC component of PTS%3Benzyme%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols%3B PTS system%2C arbutin-like IIB component%3B PTS system%2C arbutin-like IIC component;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0012038;db_xref=ASAP:ABE-0012043;db_xref=UniProtKB/Swiss-Prot:P31452;db_xref=EcoGene:EG11710 EMBL gene 3863899 3864615 . + . ID=.8011;gene=yidP;locus_tag=b3684;gene_synonym=ECK3676;gene_synonym=JW3661;db_xref=EcoGene:EG11711 EMBL CDS 3863899 3864615 . + 0 ID=.8012;gene=yidP;locus_tag=b3684;gene_synonym=ECK3676;gene_synonym=JW3661;function=putative regulator%3B Not classified;note=putative transcriptional regulator%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=UTRA domain-containing GntR family putative transcriptional regulator;protein_id=AAC76707.1;db_xref=GI:1790118;db_xref=ASAP:ABE-0012049;db_xref=UniProtKB/Swiss-Prot:P31453;db_xref=EcoGene:EG11711 EMBL gene 3864612 3866273 . - . ID=.8013;gene=yidE;locus_tag=b3685;gene_synonym=ECK3677;gene_synonym=JW3662;gene_synonym=yibE;db_xref=EcoGene:EG11536 EMBL CDS 3864612 3866273 . - 0 ID=.8014;gene=yidE;locus_tag=b3685;gene_synonym=ECK3677;gene_synonym=JW3662;gene_synonym=yibE;function=putative transport%3B Not classified;note=putative transport protein;codon_start=1;transl_table=11;product=putative transporter;protein_id=AAC76708.2;db_xref=GI:87082315;db_xref=ASAP:ABE-0012051;db_xref=UniProtKB/Swiss-Prot:P60872;db_xref=EcoGene:EG11536 EMBL gene 3866469 3866897 . - . ID=.8015;gene=ibpB;locus_tag=b3686;gene_synonym=ECK3678;gene_synonym=hslS;gene_synonym=htpE;gene_synonym=JW3663;db_xref=EcoGene:EG11535 EMBL CDS 3866469 3866897 . - 0 ID=.8016;gene=ibpB;locus_tag=b3686;gene_synonym=ECK3678;gene_synonym=hslS;gene_synonym=htpE;gene_synonym=JW3663;function=factor%3B Adaptations%2C atypical conditions;experiment=N-terminus verified by Edman degradation: PMID 1356969;note=heat shock protein%3B GO_process: GO:0009266 - response to temperature stimulus;codon_start=1;transl_table=11;product=heat shock chaperone;protein_id=AAC76709.2;db_xref=GI:87082316;db_xref=ASAP:ABE-0012054;db_xref=UniProtKB/Swiss-Prot:P0C058;db_xref=EcoGene:EG11535 EMBL gene 3867009 3867422 . - . ID=.8017;gene=ibpA;locus_tag=b3687;gene_synonym=ECK3679;gene_synonym=hslT;gene_synonym=htpN;gene_synonym=JW3664;db_xref=EcoGene:EG11534 EMBL CDS 3867009 3867422 . - 0 ID=.8018;gene=ibpA;locus_tag=b3687;gene_synonym=ECK3679;gene_synonym=hslT;gene_synonym=htpN;gene_synonym=JW3664;function=factor%3B Adaptations%2C atypical conditions;experiment=N-terminus verified by Edman degradation: PMID 1356969;note=heat shock protein%3B GO_process: GO:0009266 - response to temperature stimulus;codon_start=1;transl_table=11;product=heat shock chaperone;protein_id=AAC76710.1;db_xref=GI:1790122;db_xref=ASAP:ABE-0012058;db_xref=UniProtKB/Swiss-Prot:P0C054;db_xref=EcoGene:EG11534 EMBL gene 3867728 3868060 . + . ID=.8019;gene=yidQ;locus_tag=b3688;gene_synonym=ecfI;gene_synonym=ECK3680;gene_synonym=JW5633;db_xref=EcoGene:EG11712 EMBL CDS 3867728 3868060 . + 0 ID=.8020;gene=yidQ;locus_tag=b3688;gene_synonym=ecfI;gene_synonym=ECK3680;gene_synonym=JW5633;codon_start=1;transl_table=11;product=DUF1375 family outer membrane protein;protein_id=AAC76711.2;db_xref=GI:87082317;db_xref=ASAP:ABE-0012063;db_xref=UniProtKB/Swiss-Prot:P0ADM4;db_xref=EcoGene:EG11712 EMBL gene 3868062 3869309 . - . ID=.8021;gene=yidR;locus_tag=b3689;gene_synonym=ECK3681;gene_synonym=JW5860;db_xref=EcoGene:EG11713 EMBL CDS 3868062 3869309 . - 0 ID=.8022;gene=yidR;locus_tag=b3689;gene_synonym=ECK3681;gene_synonym=JW5860;codon_start=1;transl_table=11;product=DUF3748 family protein;protein_id=AAC76712.3;db_xref=GI:308199520;db_xref=ASAP:ABE-0012065;db_xref=UniProtKB/Swiss-Prot:P31455;db_xref=EcoGene:EG11713 EMBL gene 3869377 3870441 . + . ID=.8023;gene=cbrA;locus_tag=b3690;gene_synonym=ECK3682;gene_synonym=JW5631;gene_synonym=yidS;db_xref=EcoGene:EG11714 EMBL CDS 3869377 3870441 . + 0 ID=.8024;gene=cbrA;locus_tag=b3690;gene_synonym=ECK3682;gene_synonym=JW5631;gene_synonym=yidS;codon_start=1;transl_table=11;product=colicin M resistance protein%3B FAD-binding protein%2C putative oxidoreductase;protein_id=AAC76713.2;db_xref=GI:87082319;db_xref=ASAP:ABE-0012068;db_xref=UniProtKB/Swiss-Prot:P31456;db_xref=EcoGene:EG11714 EMBL gene 3870438 3871730 . - . ID=.8025;gene=dgoT;locus_tag=b3691;gene_synonym=ECK3683;gene_synonym=JW5859;gene_synonym=yidT;db_xref=EcoGene:EG11715 EMBL CDS 3870438 3871730 . - 0 ID=.8026;gene=dgoT;locus_tag=b3691;gene_synonym=ECK3683;gene_synonym=JW5859;gene_synonym=yidT;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=D-galactonate transport%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=D-galactonate transporter;protein_id=AAC76714.2;db_xref=GI:87082320;db_xref=ASAP:ABE-0012072;db_xref=UniProtKB/Swiss-Prot:P0AA76;db_xref=EcoGene:EG11715 EMBL gene 3871850 3872998 . - . ID=.8027;gene=dgoD;locus_tag=b4478;gene_synonym=ECK3684;gene_synonym=JW5629;gene_synonym=yidU;db_xref=EcoGene:EG20050 EMBL CDS 3871850 3872998 . - 0 ID=.8028;gene=dgoD;locus_tag=b4478;gene_synonym=ECK3684;gene_synonym=JW5629;gene_synonym=yidU;ec_number=4.2.1.6;function=enzyme%3B Degradation of small molecules: Carbon compounds;experiment=N-terminus verified by Edman degradation: PMID 7855594;note=GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=D-galactonate dehydratase;protein_id=AAT48197.1;db_xref=GI:48994953;db_xref=ASAP:ABE-0174106;db_xref=UniProtKB/Swiss-Prot:Q6BF17;db_xref=EcoGene:EG20050 EMBL gene 3872995 3873612 . - . ID=.8029;gene=dgoA;locus_tag=b4477;gene_synonym=ECK3685;gene_synonym=JW5628;gene_synonym=yidU;db_xref=EcoGene:EG11716 EMBL CDS 3872995 3873612 . - 0 ID=.8030;gene=dgoA;locus_tag=b4477;gene_synonym=ECK3685;gene_synonym=JW5628;gene_synonym=yidU;ec_number=4.1.2.21;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=2-oxo-3-deoxygalactonate 6-phosphate aldolase;protein_id=AAT48198.1;db_xref=GI:48994954;db_xref=ASAP:ABE-0174107;db_xref=UniProtKB/Swiss-Prot:Q6BF16;db_xref=EcoGene:EG11716 EMBL gene 3873596 3874474 . - . ID=.8031;gene=dgoK;locus_tag=b3693;gene_synonym=ECK3686;gene_synonym=JW3670;gene_synonym=yidV;db_xref=EcoGene:EG11717 EMBL CDS 3873596 3874474 . - 0 ID=.8032;gene=dgoK;locus_tag=b3693;gene_synonym=ECK3686;gene_synonym=JW3670;gene_synonym=yidV;ec_number=2.7.1.58;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=2-oxo-3-deoxygalactonate kinase;protein_id=AAC76716.1;db_xref=GI:1790128;db_xref=ASAP:ABE-0012076;db_xref=UniProtKB/Swiss-Prot:P31459;db_xref=EcoGene:EG11717 EMBL gene 3874471 3875160 . - . ID=.8033;gene=dgoR;locus_tag=b4479;gene_synonym=ECK3687;gene_synonym=JW5627;gene_synonym=yidW;db_xref=EcoGene:EG11718 EMBL CDS 3874471 3875160 . - 0 ID=.8034;gene=dgoR;locus_tag=b4479;gene_synonym=ECK3687;gene_synonym=JW5627;gene_synonym=yidW;note=transcriptional repressor for galactonate utilization (GntR family)%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=D-galactonate catabolism operon transcriptional repressor;protein_id=AAT48199.1;db_xref=GI:48994955;db_xref=ASAP:ABE-0174108;db_xref=UniProtKB/Swiss-Prot:P31460;db_xref=EcoGene:EG11718 EMBL gene 3875438 3876094 . + . ID=.8035;gene=yidX;locus_tag=b3696;gene_synonym=ECK3688;gene_synonym=JW5858;db_xref=EcoGene:EG11719 EMBL CDS 3875438 3876094 . + 0 ID=.8036;gene=yidX;locus_tag=b3696;gene_synonym=ECK3688;gene_synonym=JW5858;function=putative enzyme%3B Not classified;note=putative replicase EC 2.7.-;codon_start=1;transl_table=11;product=putative lipoprotein;protein_id=AAT48200.1;db_xref=GI:48994956;db_xref=ASAP:ABE-0012084;db_xref=UniProtKB/Swiss-Prot:P0ADM6;db_xref=EcoGene:EG11719 EMBL gene 3876140 3876952 . - . ID=.8037;gene=yidA;locus_tag=b3697;gene_synonym=ECK3689;gene_synonym=JW3674;db_xref=EcoGene:EG11195 EMBL CDS 3876140 3876952 . - 0 ID=.8038;gene=yidA;locus_tag=b3697;gene_synonym=ECK3689;gene_synonym=JW3674;codon_start=1;transl_table=11;product=sugar phosphate phosphatase;protein_id=AAC76720.1;db_xref=GI:2367265;db_xref=ASAP:ABE-0012086;db_xref=UniProtKB/Swiss-Prot:P0A8Y5;db_xref=EcoGene:EG11195 EMBL gene 3877067 3877465 . - . ID=.8039;gene=yidB;locus_tag=b3698;gene_synonym=ECK3690;gene_synonym=JW3675;db_xref=EcoGene:EG11196 EMBL CDS 3877067 3877465 . - 0 ID=.8040;gene=yidB;locus_tag=b3698;gene_synonym=ECK3690;gene_synonym=JW3675;codon_start=1;transl_table=11;product=DUF937 family protein;protein_id=AAC76721.2;db_xref=GI:87082321;db_xref=ASAP:ABE-0012089;db_xref=UniProtKB/Swiss-Prot:P09996;db_xref=EcoGene:EG11196 EMBL repeat_region 3877586 3877683 . + . ID=.8041;note=RIP280 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 3877705 3880119 . - . ID=.8042;gene=gyrB;locus_tag=b3699;gene_synonym=acrB;gene_synonym=Cou;gene_synonym=ECK3691;gene_synonym=himB;gene_synonym=hisU;gene_synonym=hopA;gene_synonym=JW5625;gene_synonym=nalC;gene_synonym=parA;gene_synonym=pcbA;gene_synonym=pcpA;db_xref=EcoGene:EG10424 EMBL CDS 3877705 3880119 . - 0 ID=.8043;gene=gyrB;locus_tag=b3699;gene_synonym=acrB;gene_synonym=Cou;gene_synonym=ECK3691;gene_synonym=himB;gene_synonym=hisU;gene_synonym=hopA;gene_synonym=JW5625;gene_synonym=nalC;gene_synonym=parA;gene_synonym=pcbA;gene_synonym=pcpA;ec_number=5.99.1.3;function=enzyme%3B DNA - replication%2C repair%2C restriction/modification;note=DNA gyrase subunit B%2C type II topoisomerase%2C ATPase activity%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006261 - DNA-dependent DNA replication%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=DNA gyrase%2C subunit B;protein_id=AAT48201.1;db_xref=GI:48994957;db_xref=ASAP:ABE-0012093;db_xref=UniProtKB/Swiss-Prot:P0AES6;db_xref=EcoGene:EG10424 EMBL gene 3880148 3881221 . - . ID=.8044;gene=recF;locus_tag=b3700;gene_synonym=ECK3692;gene_synonym=JW3677;gene_synonym=uvrF;db_xref=EcoGene:EG10828 EMBL CDS 3880148 3881221 . - 0 ID=.8045;gene=recF;locus_tag=b3700;gene_synonym=ECK3692;gene_synonym=JW3677;gene_synonym=uvrF;function=regulator%3B DNA - replication%2C repair%2C restriction/modification;note=ssDNA and dsDNA binding%2C ATP binding%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006261 - DNA-dependent DNA replication%3B GO_process: GO:0006281 - DNA repair%3B GO_process: GO:0006310 - DNA recombination;codon_start=1;transl_table=11;product=gap repair protein;protein_id=AAC76723.1;db_xref=GI:1790135;db_xref=ASAP:ABE-0012095;db_xref=UniProtKB/Swiss-Prot:P0A7H0;db_xref=EcoGene:EG10828 EMBL gene 3881221 3882321 . - . ID=.8046;gene=dnaN;locus_tag=b3701;gene_synonym=ECK3693;gene_synonym=JW3678;db_xref=EcoGene:EG10242 EMBL CDS 3881221 3882321 . - 0 ID=.8047;gene=dnaN;locus_tag=b3701;gene_synonym=ECK3693;gene_synonym=JW3678;ec_number=2.7.7.7;function=enzyme%3B DNA - replication%2C repair%2C restriction/modification;experiment=N-terminus verified by Edman degradation: PMID 9674428;note=DNA polymerase III%2C beta-subunit%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006261 - DNA-dependent DNA replication;codon_start=1;transl_table=11;product=DNA polymerase III%2C beta subunit;protein_id=AAC76724.1;db_xref=GI:1790136;db_xref=ASAP:ABE-0012098;db_xref=UniProtKB/Swiss-Prot:P0A988;db_xref=EcoGene:EG10242 EMBL gene 3882326 3883729 . - . ID=.8048;gene=dnaA;locus_tag=b3702;gene_synonym=ECK3694;gene_synonym=hsm-2;gene_synonym=JW3679;db_xref=EcoGene:EG10235 EMBL CDS 3882326 3883729 . - 0 ID=.8049;gene=dnaA;locus_tag=b3702;gene_synonym=ECK3694;gene_synonym=hsm-2;gene_synonym=JW3679;function=regulator%3B DNA - replication%2C repair%2C restriction/modification;note=DNA biosynthesis%3B initiation of chromosome replication%3B can be transcription regulator%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006261 - DNA-dependent DNA replication;codon_start=1;transl_table=11;product=chromosomal replication initiator protein DnaA%2C DNA-binding transcriptional dual regulator;protein_id=AAC76725.1;db_xref=GI:2367267;db_xref=ASAP:ABE-0012103;db_xref=UniProtKB/Swiss-Prot:P03004;db_xref=EcoGene:EG10235 EMBL gene 3884336 3884476 . + . ID=.8050;gene=rpmH;locus_tag=b3703;gene_synonym=ECK3695;gene_synonym=JW3680;gene_synonym=rimA;gene_synonym=ssaF;db_xref=EcoGene:EG10892 EMBL CDS 3884336 3884476 . + 0 ID=.8051;gene=rpmH;locus_tag=b3703;gene_synonym=ECK3695;gene_synonym=JW3680;gene_synonym=rimA;gene_synonym=ssaF;function=structural component%3B Ribosomal proteins - synthesis%2C modification;experiment=N-terminus verified by Edman degradation: PMID 783033%2C10739205;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0003735 - structural constituent of ribosome%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=50S ribosomal subunit protein L34;protein_id=AAC76726.1;db_xref=GI:1790138;db_xref=ASAP:ABE-0012115;db_xref=UniProtKB/Swiss-Prot:P0A7P5;db_xref=EcoGene:EG10892 EMBL gene 3884493 3884852 . + . ID=.8052;gene=rnpA;locus_tag=b3704;gene_synonym=ECK3696;gene_synonym=JW3681;db_xref=EcoGene:EG10862 EMBL CDS 3884493 3884852 . + 0 ID=.8053;gene=rnpA;locus_tag=b3704;gene_synonym=ECK3696;gene_synonym=JW3681;ec_number=3.1.26.5;function=enzyme%3B Degradation of RNA;note=RNase P is an essential enzyme responsible for the processing of the 5' ends of precursors to tRNA%2C 4.5S RNA%2C and other naturally occurring stable RNA molecules%3B RNase P also affects gene expression of polycistronic operon mRNAs%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006401 - RNA catabolic process%3B GO_process: GO:0009451 - RNA modification;codon_start=1;transl_table=11;product=protein C5 component of RNase P;protein_id=AAC76727.1;db_xref=GI:1790139;db_xref=ASAP:ABE-0012117;db_xref=UniProtKB/Swiss-Prot:P0A7Y8;db_xref=EcoGene:EG10862 EMBL gene 3884816 3885073 . + . ID=.8054;gene=yidD;locus_tag=b4557;gene_synonym=ECK3697;gene_synonym=JW3682;db_xref=EcoGene:EG11348 EMBL CDS 3884816 3885073 . + 0 ID=.8055;gene=yidD;locus_tag=b4557;gene_synonym=ECK3697;gene_synonym=JW3682;function=membrane%3B Inner membrane;note=GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=membrane protein insertion efficiency factor%2C UPF0161 family inner membrane protein;protein_id=ABD18707.1;db_xref=GI:87082322;db_xref=ASAP:ABE-0285078;db_xref=UniProtKB/Swiss-Prot:P0A8C8;db_xref=EcoGene:EG11348 EMBL gene 3885076 3886722 . + . ID=.8056;gene=yidC;locus_tag=b3705;gene_synonym=ECK3698;gene_synonym=JW3683;db_xref=EcoGene:EG11197 EMBL CDS 3885076 3886722 . + 0 ID=.8057;gene=yidC;locus_tag=b3705;gene_synonym=ECK3698;gene_synonym=JW3683;function=membrane%3B Inner membrane;note=60 KD inner-membrane protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=membrane protein insertase;protein_id=AAC76728.1;db_xref=GI:1790140;db_xref=ASAP:ABE-0012120;db_xref=UniProtKB/Swiss-Prot:P25714;db_xref=EcoGene:EG11197 EMBL repeat_region 3886778 3886806 . + . ID=.8058;note=REP281 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 3886828 3888192 . + . ID=.8059;gene=mnmE;locus_tag=b3706;gene_synonym=ECK3699;gene_synonym=JW3684;gene_synonym=thdF;gene_synonym=trmE;db_xref=EcoGene:EG10997 EMBL CDS 3886828 3888192 . + 0 ID=.8060;gene=mnmE;locus_tag=b3706;gene_synonym=ECK3699;gene_synonym=JW3684;gene_synonym=thdF;gene_synonym=trmE;function=enzyme%3B tRNA modification;note=GO_process: GO:0009451 - RNA modification%3B GO_process: GO:0006805 - xenobiotic metabolic process;codon_start=1;transl_table=11;product=tRNA U34 5-methylaminomethyl-2-thiouridine modification GTPase;protein_id=AAC76729.1;db_xref=GI:2367268;db_xref=ASAP:ABE-0012123;db_xref=UniProtKB/Swiss-Prot:P25522;db_xref=EcoGene:EG10997 EMBL gene 3888435 3888509 . + . ID=.8061;gene=tnaC;locus_tag=b3707;gene_synonym=ECK3700;gene_synonym=JW3685;gene_synonym=tnaL;db_xref=EcoGene:EG11276 EMBL CDS 3888435 3888509 . + 0 ID=.8062;gene=tnaC;locus_tag=b3707;gene_synonym=ECK3700;gene_synonym=JW3685;gene_synonym=tnaL;function=leader%3B Degradation of small molecules: Amino acids;note=GO_process: GO:0009063 - cellular amino acid catabolic process;codon_start=1;transl_table=11;product=tryptophanase leader peptide;protein_id=AAC76730.1;db_xref=GI:1790143;db_xref=ASAP:ABE-0012128;db_xref=UniProtKB/Swiss-Prot:P0AD89;db_xref=EcoGene:EG11276 EMBL gene 3888730 3890145 . + . ID=.8063;gene=tnaA;locus_tag=b3708;gene_synonym=ECK3701;gene_synonym=ind;gene_synonym=JW3686;db_xref=EcoGene:EG11005 EMBL CDS 3888730 3890145 . + 0 ID=.8064;gene=tnaA;locus_tag=b3708;gene_synonym=ECK3701;gene_synonym=ind;gene_synonym=JW3686;ec_number=4.1.99.1;function=enzyme%3B Degradation of small molecules: Amino acids;experiment=N-terminus verified by Edman degradation: PMID 9298646%2C9732527%2C10094700%2C17895580;note=tryptophanase%3B GO_process: GO:0009063 - cellular amino acid catabolic process;codon_start=1;transl_table=11;product=tryptophanase/L-cysteine desulfhydrase%2C PLP-dependent;protein_id=AAC76731.2;db_xref=GI:87082323;db_xref=ASAP:ABE-0012133;db_xref=UniProtKB/Swiss-Prot:P0A853;db_xref=EcoGene:EG11005 EMBL gene 3890236 3891483 . + . ID=.8065;gene=tnaB;locus_tag=b3709;gene_synonym=ECK3702;gene_synonym=JW5619;gene_synonym=JW5622;gene_synonym=tnaP;gene_synonym=trpP;db_xref=EcoGene:EG11006 EMBL CDS 3890236 3891483 . + 0 ID=.8066;gene=tnaB;locus_tag=b3709;gene_synonym=ECK3702;gene_synonym=JW5619;gene_synonym=JW5622;gene_synonym=tnaP;gene_synonym=trpP;function=transport%3B Transport of small molecules: Amino acids%2C amines;note=low affinity tryptophan permease%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0000162 - tryptophan biosynthetic process;codon_start=1;transl_table=11;product=tryptophan transporter of low affinity;protein_id=AAC76732.1;db_xref=GI:1790145;db_xref=ASAP:ABE-0012135;db_xref=UniProtKB/Swiss-Prot:P23173;db_xref=EcoGene:EG11006 EMBL gene 3891615 3892790 . + . ID=.8067;gene=mdtL;locus_tag=b3710;gene_synonym=ECK3703;gene_synonym=JW3688;gene_synonym=yidY;db_xref=EcoGene:EG11720 EMBL CDS 3891615 3892790 . + 0 ID=.8068;gene=mdtL;locus_tag=b3710;gene_synonym=ECK3703;gene_synonym=JW3688;gene_synonym=yidY;function=putative transport%3B Not classified;note=putative transport protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=multidrug efflux system protein;protein_id=AAC76733.1;db_xref=GI:1790146;db_xref=ASAP:ABE-0012139;db_xref=UniProtKB/Swiss-Prot:P31462;db_xref=EcoGene:EG11720 EMBL gene 3892765 3893724 . + . ID=.8069;gene=yidZ;locus_tag=b3711;gene_synonym=ECK3704;gene_synonym=JW3689;db_xref=EcoGene:EG11721 EMBL CDS 3892765 3893724 . + 0 ID=.8070;gene=yidZ;locus_tag=b3711;gene_synonym=ECK3704;gene_synonym=JW3689;function=putative regulator%3B Not classified;note=putative transcriptional regulator LYSR-type%3B GO_function: GO:0016563 - transcription activator activity%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=putative DNA-binding transcriptional regulator;protein_id=AAC76734.1;db_xref=GI:1790147;db_xref=ASAP:ABE-0012141;db_xref=UniProtKB/Swiss-Prot:P31463;db_xref=EcoGene:EG11721 EMBL gene 3893881 3894630 . + . ID=.8071;gene=yieE;locus_tag=b3712;gene_synonym=ECK3705;gene_synonym=JW3690;db_xref=EcoGene:EG11722 EMBL CDS 3893881 3894630 . + 0 ID=.8072;gene=yieE;locus_tag=b3712;gene_synonym=ECK3705;gene_synonym=JW3690;codon_start=1;transl_table=11;product=phosphopantetheinyl transferase superfamily protein;protein_id=AAC76735.2;db_xref=GI:226510986;db_xref=ASAP:ABE-0012144;db_xref=UniProtKB/Swiss-Prot:P0ADM8;db_xref=EcoGene:EG11722 EMBL gene 3894652 3895218 . + . ID=.8073;gene=chrR;locus_tag=b3713;gene_synonym=ECK3706;gene_synonym=JW3691;gene_synonym=yieF;db_xref=EcoGene:EG11723 EMBL CDS 3894652 3895218 . + 0 ID=.8074;gene=chrR;locus_tag=b3713;gene_synonym=ECK3706;gene_synonym=JW3691;gene_synonym=yieF;codon_start=1;transl_table=11;product=chromate reductase%2C Class I%2C flavoprotein;protein_id=AAC76736.1;db_xref=GI:1790149;db_xref=ASAP:ABE-0012146;db_xref=UniProtKB/Swiss-Prot:P0AGE6;db_xref=EcoGene:EG11723 EMBL gene 3895272 3896609 . - . ID=.8075;gene=adeP;locus_tag=b3714;gene_synonym=ECK3707;gene_synonym=JW3692;gene_synonym=purP;gene_synonym=yieG;db_xref=EcoGene:EG11724 EMBL CDS 3895272 3896609 . - 0 ID=.8076;gene=adeP;locus_tag=b3714;gene_synonym=ECK3707;gene_synonym=JW3692;gene_synonym=purP;gene_synonym=yieG;function=transport%3B Transport of small molecules: Nucleosides%2C purines%2C pyrimidines;note=putative membrane / transport protein;codon_start=1;transl_table=11;product=adenine permease%2C high affinity%3B adenine:H+ symporter;protein_id=AAC76737.1;db_xref=GI:1790150;db_xref=ASAP:ABE-0012148;db_xref=UniProtKB/Swiss-Prot:P31466;db_xref=EcoGene:EG11724 EMBL gene 3896774 3897439 . + . ID=.8077;gene=yieH;locus_tag=b3715;gene_synonym=ECK3708;gene_synonym=JW3693;db_xref=EcoGene:EG11725 EMBL CDS 3896774 3897439 . + 0 ID=.8078;gene=yieH;locus_tag=b3715;gene_synonym=ECK3708;gene_synonym=JW3693;function=enzyme%3B Not classified;note=putative phosphatase;codon_start=1;transl_table=11;product=phosphoenolpyruvate and 6-phosphogluconate phosphatase;protein_id=AAC76738.1;db_xref=GI:1790151;db_xref=ASAP:ABE-0012153;db_xref=UniProtKB/Swiss-Prot:P31467;db_xref=EcoGene:EG11725 EMBL gene 3897506 3897973 . + . ID=.8079;gene=cbrB;locus_tag=b3716;gene_synonym=ECK3709;gene_synonym=JW3694;gene_synonym=yieI;db_xref=EcoGene:EG11726 EMBL CDS 3897506 3897973 . + 0 ID=.8080;gene=cbrB;locus_tag=b3716;gene_synonym=ECK3709;gene_synonym=JW3694;gene_synonym=yieI;codon_start=1;transl_table=11;product=PRK09823 family inner membrane protein%2C creBC regulon;protein_id=AAC76739.1;db_xref=GI:1790152;db_xref=ASAP:ABE-0012156;db_xref=UniProtKB/Swiss-Prot:P31468;db_xref=EcoGene:EG11726 EMBL gene 3898022 3898609 . + . ID=.8081;gene=cbrC;locus_tag=b3717;gene_synonym=ECK3710;gene_synonym=JW3695;gene_synonym=yieJ;db_xref=EcoGene:EG11727 EMBL CDS 3898022 3898609 . + 0 ID=.8082;gene=cbrC;locus_tag=b3717;gene_synonym=ECK3710;gene_synonym=JW3695;gene_synonym=yieJ;codon_start=1;transl_table=11;product=UPF0167 family protein;protein_id=AAC76740.1;db_xref=GI:1790153;db_xref=ASAP:ABE-0012158;db_xref=UniProtKB/Swiss-Prot:P31469;db_xref=EcoGene:EG11727 EMBL repeat_region 3898631 3898656 . + . ID=.8083;note=REP282 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 3898671 3899393 . - . ID=.8084;gene=yieK;locus_tag=b3718;gene_synonym=ECK3711;gene_synonym=JW5613;db_xref=EcoGene:EG11728 EMBL CDS 3898671 3899393 . - 0 ID=.8085;gene=yieK;locus_tag=b3718;gene_synonym=ECK3711;gene_synonym=JW5613;function=putative enzyme%3B Not classified;note=pyrimidine-specific nucleoside hydrolase;codon_start=1;transl_table=11;product=putative 6-phosphogluconolactonase;protein_id=AAT48202.1;db_xref=GI:48994958;db_xref=ASAP:ABE-0012160;db_xref=UniProtKB/Swiss-Prot:P31470;db_xref=EcoGene:EG11728 EMBL gene 3899408 3900577 . - . ID=.8086;gene=yieL;locus_tag=b3719;gene_synonym=ECK3712;gene_synonym=JW5612;db_xref=EcoGene:EG11729 EMBL CDS 3899408 3900577 . - 0 ID=.8087;gene=yieL;locus_tag=b3719;gene_synonym=ECK3712;gene_synonym=JW5612;function=putative enzyme%3B Not classified;note=GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=putative xylanase;protein_id=AAC76742.3;db_xref=GI:145693201;db_xref=ASAP:ABE-0012163;db_xref=UniProtKB/Swiss-Prot:P31471;db_xref=EcoGene:EG11729 EMBL gene 3900604 3902220 . - . ID=.8088;gene=bglH;locus_tag=b3720;gene_synonym=ECK3713;gene_synonym=JW3698;gene_synonym=yieC;db_xref=EcoGene:EG11364 EMBL CDS 3900604 3902220 . - 0 ID=.8089;gene=bglH;locus_tag=b3720;gene_synonym=ECK3713;gene_synonym=JW3698;gene_synonym=yieC;function=putative membrane%3B Not classified;note=putative receptor protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane;codon_start=1;transl_table=11;product=carbohydrate-specific outer membrane porin%2C cryptic;protein_id=AAC76743.1;db_xref=GI:1790157;db_xref=ASAP:ABE-0012165;db_xref=UniProtKB/Swiss-Prot:P26218;db_xref=EcoGene:EG11364 EMBL gene 3902289 3903701 . - . ID=.8090;gene=bglB;locus_tag=b3721;gene_synonym=ECK3714;gene_synonym=JW3699;db_xref=EcoGene:EG10114 EMBL CDS 3902289 3903701 . - 0 ID=.8091;gene=bglB;locus_tag=b3721;gene_synonym=ECK3714;gene_synonym=JW3699;ec_number=3.2.1.86;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=phospho-beta-glucosidase B%3B cryptic%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=cryptic phospho-beta-glucosidase B;protein_id=AAC76744.1;db_xref=GI:2367270;db_xref=ASAP:ABE-0012169;db_xref=UniProtKB/Swiss-Prot:P11988;db_xref=EcoGene:EG10114 EMBL gene 3903720 3905597 . - . ID=.8092;gene=bglF;locus_tag=b3722;gene_synonym=bglC;gene_synonym=bglS;gene_synonym=ECK3715;gene_synonym=JW3700;db_xref=EcoGene:EG10115 EMBL CDS 3903720 3905597 . - 0 ID=.8093;gene=bglF;locus_tag=b3722;gene_synonym=bglC;gene_synonym=bglS;gene_synonym=ECK3715;gene_synonym=JW3700;ec_number=2.7.1.69;function=enzyme%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=PTS system beta-glucosides%2C enzyme II%2C cryptic%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=fused beta-glucoside-specific PTS enzymes: IIA component/IIB component/IIC component;protein_id=AAC76745.1;db_xref=GI:1790159;db_xref=ASAP:ABE-0012171;db_xref=UniProtKB/Swiss-Prot:P08722;db_xref=EcoGene:EG10115 EMBL gene 3905731 3906567 . - . ID=.8094;gene=bglG;locus_tag=b3723;gene_synonym=bglC;gene_synonym=bglR;gene_synonym=bglS;gene_synonym=ECK3716;gene_synonym=JW3701;db_xref=EcoGene:EG10116 EMBL CDS 3905731 3906567 . - 0 ID=.8095;gene=bglG;locus_tag=b3723;gene_synonym=bglC;gene_synonym=bglR;gene_synonym=bglS;gene_synonym=ECK3716;gene_synonym=JW3701;function=regulator%3B Degradation of small molecules: Carbon compounds;note=positive regulation of bgl operon%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=transcriptional antiterminator of the bgl operon;protein_id=AAC76746.1;db_xref=GI:1790160;db_xref=ASAP:ABE-0012174;db_xref=UniProtKB/Swiss-Prot:P11989;db_xref=EcoGene:EG10116 EMBL gene 3906853 3907578 . - . ID=.8096;gene=phoU;locus_tag=b3724;gene_synonym=ECK3717;gene_synonym=JW3702;gene_synonym=phoT;db_xref=EcoGene:EG10735 EMBL CDS 3906853 3907578 . - 0 ID=.8097;gene=phoU;locus_tag=b3724;gene_synonym=ECK3717;gene_synonym=JW3702;gene_synonym=phoT;function=regulator%3B Global regulatory functions;experiment=N-terminus verified by Edman degradation: PMID 3536855;note=negative regulator for pho regulon and putative enzyme in phosphate metabolism%3B GO_process: GO:0006793 - phosphorus metabolic process;codon_start=1;transl_table=11;product=negative regulator of PhoR/PhoB two-component regulator;protein_id=AAC76747.1;db_xref=GI:1790161;db_xref=ASAP:ABE-0012177;db_xref=UniProtKB/Swiss-Prot:P0A9K7;db_xref=EcoGene:EG10735 EMBL gene 3907593 3908366 . - . ID=.8098;gene=pstB;locus_tag=b3725;gene_synonym=ECK3718;gene_synonym=JW3703;gene_synonym=phoT;db_xref=EcoGene:EG10783 EMBL CDS 3907593 3908366 . - 0 ID=.8099;gene=pstB;locus_tag=b3725;gene_synonym=ECK3718;gene_synonym=JW3703;gene_synonym=phoT;ec_number=3.6.3.27;function=transport%3B Transport of small molecules: Anions;note=ATP-binding component of high-affinity phosphate-specific transport system%3B ATP-binding component of ABC superfamily%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006793 - phosphorus metabolic process;codon_start=1;transl_table=11;product=phosphate ABC transporter ATPase;protein_id=AAC76748.1;db_xref=GI:1790162;db_xref=ASAP:ABE-0012179;db_xref=UniProtKB/Swiss-Prot:P0AAH0;db_xref=EcoGene:EG10783 EMBL repeat_region 3908387 3908450 . + . ID=.8100;note=REP283 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 3908549 3909439 . - . ID=.8101;gene=pstA;locus_tag=b3726;gene_synonym=ECK3719;gene_synonym=JW3704;gene_synonym=phoR2b;gene_synonym=phoT;gene_synonym=R2pho;db_xref=EcoGene:EG10782 EMBL CDS 3908549 3909439 . - 0 ID=.8102;gene=pstA;locus_tag=b3726;gene_synonym=ECK3719;gene_synonym=JW3704;gene_synonym=phoR2b;gene_synonym=phoT;gene_synonym=R2pho;function=transport%3B Transport of small molecules: Anions;note=high-affinity phosphate-specific transport system%3B membrane component of ABC superfamily%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006793 - phosphorus metabolic process;codon_start=1;transl_table=11;product=phosphate ABC transporter permease;protein_id=AAC76749.1;db_xref=GI:1790163;db_xref=ASAP:ABE-0012184;db_xref=UniProtKB/Swiss-Prot:P07654;db_xref=EcoGene:EG10782 EMBL gene 3909439 3910398 . - . ID=.8103;gene=pstC;locus_tag=b3727;gene_synonym=ECK3720;gene_synonym=JW3705;gene_synonym=phoW;db_xref=EcoGene:EG10784 EMBL CDS 3909439 3910398 . - 0 ID=.8104;gene=pstC;locus_tag=b3727;gene_synonym=ECK3720;gene_synonym=JW3705;gene_synonym=phoW;function=transport%3B Transport of small molecules: Anions;note=high-affinity phosphate-specific transport system%2C cytoplasmic membrane component%3B membrane component of ABC superfamily%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006793 - phosphorus metabolic process;codon_start=1;transl_table=11;product=phosphate ABC transporter permease;protein_id=AAC76750.1;db_xref=GI:1790164;db_xref=ASAP:ABE-0012186;db_xref=UniProtKB/Swiss-Prot:P0AGH8;db_xref=EcoGene:EG10784 EMBL repeat_region 3910443 3910477 . + . ID=.8105;note=REP284 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 3910485 3911525 . - . ID=.8106;gene=pstS;locus_tag=b3728;gene_synonym=ECK3721;gene_synonym=JW3706;gene_synonym=nmpA;gene_synonym=phoR2a;gene_synonym=phoS;gene_synonym=R2pho;db_xref=EcoGene:EG10734 EMBL CDS 3910485 3911525 . - 0 ID=.8107;gene=pstS;locus_tag=b3728;gene_synonym=ECK3721;gene_synonym=JW3706;gene_synonym=nmpA;gene_synonym=phoR2a;gene_synonym=phoS;gene_synonym=R2pho;function=transport%3B Transport of small molecules: Anions;note=high-affinity phosphate-specific transport system%3B periplasmic phosphate-binding protein%3B periplasmic-binding component of ABC superfamily%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0006793 - phosphorus metabolic process;codon_start=1;transl_table=11;product=phosphate ABC transporter periplasmic binding protein;protein_id=AAC76751.1;db_xref=GI:2367271;db_xref=ASAP:ABE-0012190;db_xref=UniProtKB/Swiss-Prot:P0AG82;db_xref=EcoGene:EG10734 EMBL gene 3911839 3913668 . - . ID=.8108;gene=glmS;locus_tag=b3729;gene_synonym=ECK3722;gene_synonym=JW3707;db_xref=EcoGene:EG10382 EMBL CDS 3911839 3913668 . - 0 ID=.8109;gene=glmS;locus_tag=b3729;gene_synonym=ECK3722;gene_synonym=JW3707;ec_number=2.6.1.16;function=enzyme%3B Central intermediary metabolism: Amino sugars;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0009243 - O antigen biosynthetic process%3B GO_process: GO:0009252 - peptidoglycan biosynthetic process%3B GO_process: GO:0046349 - amino sugar biosynthetic process;codon_start=1;transl_table=11;product=L-glutamine:D-fructose-6-phosphate aminotransferase;protein_id=AAC76752.1;db_xref=GI:1790167;db_xref=ASAP:ABE-0012198;db_xref=UniProtKB/Swiss-Prot:P17169;db_xref=EcoGene:EG10382 EMBL gene 3913830 3915200 . - . ID=.8110;gene=glmU;locus_tag=b3730;gene_synonym=ECK3723;gene_synonym=JW3708;gene_synonym=tms;gene_synonym=yieA;db_xref=EcoGene:EG11198 EMBL CDS 3913830 3915200 . - 0 ID=.8111;gene=glmU;locus_tag=b3730;gene_synonym=ECK3723;gene_synonym=JW3708;gene_synonym=tms;gene_synonym=yieA;ec_number=2.7.7.23;function=enzyme%3B Central intermediary metabolism: Sugar-nucleotide biosynthesis%2C conversions;note=N-acetyl glucosamine-1-phosphate uridyltransferase%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0009243 - O antigen biosynthetic process%3B GO_process: GO:0009252 - peptidoglycan biosynthetic process%3B GO_process: GO:0009226 - nucleotide-sugar biosynthetic process%3B GO_process: GO:0009246 - enterobacterial common antigen biosynthetic process%3B GO_process: GO:0009310 - amine catabolic process;codon_start=1;transl_table=11;product=fused N-acetyl glucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyl transferase;protein_id=AAC76753.1;db_xref=GI:1790168;db_xref=ASAP:ABE-0012201;db_xref=UniProtKB/Swiss-Prot:P0ACC7;db_xref=EcoGene:EG11198 EMBL gene 3915553 3915972 . - . ID=.8112;gene=atpC;locus_tag=b3731;gene_synonym=ECK3724;gene_synonym=JW3709;gene_synonym=papG;gene_synonym=uncC;db_xref=EcoGene:EG10100 EMBL CDS 3915553 3915972 . - 0 ID=.8113;gene=atpC;locus_tag=b3731;gene_synonym=ECK3724;gene_synonym=JW3709;gene_synonym=papG;gene_synonym=uncC;ec_number=3.6.3.14;function=enzyme%3B ATP-proton motive force interconversion;note=membrane-bound ATP synthase%2C F1 sector%2C epsilon-subunit%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0015986 - ATP synthesis coupled proton transport;codon_start=1;transl_table=11;product=F1 sector of membrane-bound ATP synthase%2C epsilon subunit;protein_id=AAC76754.1;db_xref=GI:1790169;db_xref=ASAP:ABE-0012206;db_xref=UniProtKB/Swiss-Prot:P0A6E6;db_xref=EcoGene:EG10100 EMBL gene 3915993 3917375 . - . ID=.8114;gene=atpD;locus_tag=b3732;gene_synonym=ECK3725;gene_synonym=JW3710;gene_synonym=papB;gene_synonym=uncD;db_xref=EcoGene:EG10101 EMBL CDS 3915993 3917375 . - 0 ID=.8115;gene=atpD;locus_tag=b3732;gene_synonym=ECK3725;gene_synonym=JW3710;gene_synonym=papB;gene_synonym=uncD;ec_number=3.6.3.14;function=enzyme%3B ATP-proton motive force interconversion;note=membrane-bound ATP synthase%2C F1 sector%2C beta-subunit%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0015986 - ATP synthesis coupled proton transport;codon_start=1;transl_table=11;product=F1 sector of membrane-bound ATP synthase%2C beta subunit;protein_id=AAC76755.1;db_xref=GI:1790170;db_xref=ASAP:ABE-0012208;db_xref=UniProtKB/Swiss-Prot:P0ABB4;db_xref=EcoGene:EG10101 EMBL gene 3917402 3918265 . - . ID=.8116;gene=atpG;locus_tag=b3733;gene_synonym=ECK3726;gene_synonym=JW3711;gene_synonym=papC;gene_synonym=uncG;db_xref=EcoGene:EG10104 EMBL CDS 3917402 3918265 . - 0 ID=.8117;gene=atpG;locus_tag=b3733;gene_synonym=ECK3726;gene_synonym=JW3711;gene_synonym=papC;gene_synonym=uncG;ec_number=3.6.3.14;function=enzyme%3B ATP-proton motive force interconversion;note=membrane-bound ATP synthase%2C F1 sector%2C gamma-subunit%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0015986 - ATP synthesis coupled proton transport;codon_start=1;transl_table=11;product=F1 sector of membrane-bound ATP synthase%2C gamma subunit;protein_id=AAC76756.1;db_xref=GI:1790171;db_xref=ASAP:ABE-0012211;db_xref=UniProtKB/Swiss-Prot:P0ABA6;db_xref=EcoGene:EG10104 EMBL gene 3918316 3919857 . - . ID=.8118;gene=atpA;locus_tag=b3734;gene_synonym=ECK3727;gene_synonym=JW3712;gene_synonym=papA;gene_synonym=uncA;db_xref=EcoGene:EG10098 EMBL CDS 3918316 3919857 . - 0 ID=.8119;gene=atpA;locus_tag=b3734;gene_synonym=ECK3727;gene_synonym=JW3712;gene_synonym=papA;gene_synonym=uncA;ec_number=3.6.3.14;function=enzyme%3B ATP-proton motive force interconversion;experiment=N-terminus verified by Edman degradation: PMID 9298646;note=membrane-bound ATP synthase%2C F1 sector%2C alpha-subunit%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0015986 - ATP synthesis coupled proton transport;codon_start=1;transl_table=11;product=F1 sector of membrane-bound ATP synthase%2C alpha subunit;protein_id=AAC76757.1;db_xref=GI:1790172;db_xref=ASAP:ABE-0012213;db_xref=UniProtKB/Swiss-Prot:P0ABB0;db_xref=EcoGene:EG10098 EMBL gene 3919870 3920403 . - . ID=.8120;gene=atpH;locus_tag=b3735;gene_synonym=ECK3728;gene_synonym=JW3713;gene_synonym=papE;gene_synonym=uncH;db_xref=EcoGene:EG10105 EMBL CDS 3919870 3920403 . - 0 ID=.8121;gene=atpH;locus_tag=b3735;gene_synonym=ECK3728;gene_synonym=JW3713;gene_synonym=papE;gene_synonym=uncH;ec_number=3.6.3.14;function=enzyme%3B ATP-proton motive force interconversion;note=membrane-bound ATP synthase%2C F1 sector%2C delta-subunit%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0015986 - ATP synthesis coupled proton transport;codon_start=1;transl_table=11;product=F1 sector of membrane-bound ATP synthase%2C delta subunit;protein_id=AAC76758.1;db_xref=GI:1790173;db_xref=ASAP:ABE-0012215;db_xref=UniProtKB/Swiss-Prot:P0ABA4;db_xref=EcoGene:EG10105 EMBL gene 3920418 3920888 . - . ID=.8122;gene=atpF;locus_tag=b3736;gene_synonym=ECK3729;gene_synonym=JW3714;gene_synonym=papF;gene_synonym=uncF;db_xref=EcoGene:EG10103 EMBL CDS 3920418 3920888 . - 0 ID=.8123;gene=atpF;locus_tag=b3736;gene_synonym=ECK3729;gene_synonym=JW3714;gene_synonym=papF;gene_synonym=uncF;ec_number=3.6.3.14;function=enzyme%3B ATP-proton motive force interconversion;experiment=N-terminus verified by Edman degradation: PMID 6278247%2C9298646;note=membrane-bound ATP synthase%2C F0 sector%2C subunit b%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0015986 - ATP synthesis coupled proton transport;codon_start=1;transl_table=11;product=F0 sector of membrane-bound ATP synthase%2C subunit b;protein_id=AAC76759.1;db_xref=GI:1790174;db_xref=ASAP:ABE-0012217;db_xref=UniProtKB/Swiss-Prot:P0ABA0;db_xref=EcoGene:EG10103 EMBL gene 3920950 3921189 . - . ID=.8124;gene=atpE;locus_tag=b3737;gene_synonym=ECK3730;gene_synonym=JW3715;gene_synonym=papH;gene_synonym=uncE;db_xref=EcoGene:EG10102 EMBL CDS 3920950 3921189 . - 0 ID=.8125;gene=atpE;locus_tag=b3737;gene_synonym=ECK3730;gene_synonym=JW3715;gene_synonym=papH;gene_synonym=uncE;ec_number=3.6.3.14;function=enzyme%3B ATP-proton motive force interconversion;experiment=N-terminus verified by Edman degradation: PMID 6256167%2C6446460;note=membrane-bound ATP synthase%2C F0 sector%2C subunit c%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0015986 - ATP synthesis coupled proton transport;codon_start=1;transl_table=11;product=F0 sector of membrane-bound ATP synthase%2C subunit c;protein_id=AAC76760.1;db_xref=GI:1790175;db_xref=ASAP:ABE-0012220;db_xref=UniProtKB/Swiss-Prot:P68699;db_xref=EcoGene:EG10102 EMBL gene 3921236 3922051 . - . ID=.8126;gene=atpB;locus_tag=b3738;gene_synonym=ECK3731;gene_synonym=JW3716;gene_synonym=papD;gene_synonym=uncB;db_xref=EcoGene:EG10099 EMBL CDS 3921236 3922051 . - 0 ID=.8127;gene=atpB;locus_tag=b3738;gene_synonym=ECK3731;gene_synonym=JW3716;gene_synonym=papD;gene_synonym=uncB;ec_number=3.6.3.14;function=enzyme%3B ATP-proton motive force interconversion;note=membrane-bound ATP synthase%2C F0 sector%2C subunit a%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0015986 - ATP synthesis coupled proton transport%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=F0 sector of membrane-bound ATP synthase%2C subunit a;protein_id=AAC76761.1;db_xref=GI:1790176;db_xref=ASAP:ABE-0012222;db_xref=UniProtKB/Swiss-Prot:P0AB98;db_xref=EcoGene:EG10099 EMBL gene 3922060 3922440 . - . ID=.8128;gene=atpI;locus_tag=b3739;gene_synonym=ECK3732;gene_synonym=JW5611;gene_synonym=uncI;db_xref=EcoGene:EG10106 EMBL CDS 3922060 3922440 . - 0 ID=.8129;gene=atpI;locus_tag=b3739;gene_synonym=ECK3732;gene_synonym=JW5611;gene_synonym=uncI;ec_number=3.6.3.14;function=enzyme%3B ATP-proton motive force interconversion;note=membrane-bound ATP synthase%2C dispensable protein%2C affects expression of atpB%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0015986 - ATP synthesis coupled proton transport;codon_start=1;transl_table=11;product=ATP synthase%2C membrane-bound accessory factor;protein_id=AAC76762.2;db_xref=GI:87082325;db_xref=ASAP:ABE-0012224;db_xref=UniProtKB/Swiss-Prot:P0ABC0;db_xref=EcoGene:EG10106 EMBL gene 3923057 3923680 . - . ID=.8130;gene=rsmG;locus_tag=b3740;gene_synonym=ECK3733;gene_synonym=gidB;gene_synonym=JW3718;db_xref=EcoGene:EG10376 EMBL CDS 3923057 3923680 . - 0 ID=.8131;gene=rsmG;locus_tag=b3740;gene_synonym=ECK3733;gene_synonym=gidB;gene_synonym=JW3718;function=enzyme%3B rRNA modification%3B phenotype%3B DNA - replication%2C repair%2C restriction/modification;note=glucose-inhibited division%3B chromosome replication?;codon_start=1;transl_table=11;product=16S rRNA m(7)G527 methyltransferase%2C SAM-dependent%3B glucose-inhibited cell-division protein;protein_id=AAC76763.1;db_xref=GI:1790179;db_xref=ASAP:ABE-0012229;db_xref=UniProtKB/Swiss-Prot:P0A6U5;db_xref=EcoGene:EG10376 EMBL gene 3923744 3925633 . - . ID=.8132;gene=mnmG;locus_tag=b3741;gene_synonym=ECK3734;gene_synonym=gidA;gene_synonym=JW3719;gene_synonym=mnmB;gene_synonym=trmF;db_xref=EcoGene:EG10375 EMBL CDS 3923744 3925633 . - 0 ID=.8133;gene=mnmG;locus_tag=b3741;gene_synonym=ECK3734;gene_synonym=gidA;gene_synonym=JW3719;gene_synonym=mnmB;gene_synonym=trmF;function=enzyme%3B tRNA modification;note=glucose-inhibited division%3B chromosome replication?;codon_start=1;transl_table=11;product=5-methylaminomethyl-2-thiouridine modification at tRNA U34;protein_id=AAC76764.1;db_xref=GI:2367273;db_xref=ASAP:ABE-0012231;db_xref=UniProtKB/Swiss-Prot:P0A6U3;db_xref=EcoGene:EG10375 EMBL origin_of_replication 3925744 3925975 . + . ID=.8134;note=oriC%3B origin of chromosomal DNA replication%2C bidirectional%3B oriC%3B b4489%3B ECK3735%3B JWS0001;db_xref=ASAP:ABE-0012233 EMBL gene 3926012 3926455 . - . ID=.8135;gene=mioC;locus_tag=b3742;gene_synonym=ECK3736;gene_synonym=JW3720;gene_synonym=yieB;db_xref=EcoGene:EG11199 EMBL CDS 3926012 3926455 . - 0 ID=.8136;gene=mioC;locus_tag=b3742;gene_synonym=ECK3736;gene_synonym=JW3720;gene_synonym=yieB;function=factor%3B DNA - replication%2C repair%2C restriction/modification;note=initiation of chromosome replication%3B GO_process: GO:0006261 - DNA-dependent DNA replication;codon_start=1;transl_table=11;product=FMN-binding protein MioC;protein_id=AAC76765.1;db_xref=GI:1790181;db_xref=ASAP:ABE-0012235;db_xref=UniProtKB/Swiss-Prot:P03817;db_xref=EcoGene:EG11199 EMBL gene 3926545 3927003 . - . ID=.8137;gene=asnC;locus_tag=b3743;gene_synonym=ECK3737;gene_synonym=JW3721;db_xref=EcoGene:EG10093 EMBL CDS 3926545 3927003 . - 0 ID=.8138;gene=asnC;locus_tag=b3743;gene_synonym=ECK3737;gene_synonym=JW3721;function=regulator%3B Amino acid biosynthesis: Asparagine;note=regulator for asnA%2C asnC and gidA%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006529 - asparagine biosynthetic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=transcriptional activator of asnA%3B autorepressor;protein_id=AAC76766.1;db_xref=GI:1790182;db_xref=ASAP:ABE-0012237;db_xref=UniProtKB/Swiss-Prot:P0ACI6;db_xref=EcoGene:EG10093 EMBL gene 3927155 3928147 . + . ID=.8139;gene=asnA;locus_tag=b3744;gene_synonym=ECK3738;gene_synonym=JW3722;db_xref=EcoGene:EG10091 EMBL CDS 3927155 3928147 . + 0 ID=.8140;gene=asnA;locus_tag=b3744;gene_synonym=ECK3738;gene_synonym=JW3722;ec_number=6.3.1.1;function=enzyme%3B Amino acid biosynthesis: Asparagine;experiment=N-terminus verified by Edman degradation: PMID 1369484;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009063 - cellular amino acid catabolic process%3B GO_process: GO:0006529 - asparagine biosynthetic process;codon_start=1;transl_table=11;product=asparagine synthetase A;protein_id=AAC76767.1;db_xref=GI:1790183;db_xref=ASAP:ABE-0012242;db_xref=UniProtKB/Swiss-Prot:P00963;db_xref=EcoGene:EG10091 EMBL gene 3928152 3929603 . - . ID=.8141;gene=viaA;locus_tag=b3745;gene_synonym=ECK3739;gene_synonym=JW5610;gene_synonym=yieD;gene_synonym=yieM;db_xref=EcoGene:EG11730 EMBL CDS 3928152 3929603 . - 0 ID=.8142;gene=viaA;locus_tag=b3745;gene_synonym=ECK3739;gene_synonym=JW5610;gene_synonym=yieD;gene_synonym=yieM;codon_start=1;transl_table=11;product=stimulator of RavA ATPase activity%3B von Willebrand factor domain protein;protein_id=AAT48203.1;db_xref=GI:48994959;db_xref=ASAP:ABE-0012244;db_xref=UniProtKB/Swiss-Prot:P0ADN0;db_xref=EcoGene:EG11730 EMBL gene 3929597 3931093 . - . ID=.8143;gene=ravA;locus_tag=b3746;gene_synonym=ECK3740;gene_synonym=JW3725;gene_synonym=yieN;db_xref=EcoGene:EG11731 EMBL CDS 3929597 3931093 . - 0 ID=.8144;gene=ravA;locus_tag=b3746;gene_synonym=ECK3740;gene_synonym=JW3725;gene_synonym=yieN;function=putative regulator%3B Not classified;note=putative 2-component regulator;codon_start=1;transl_table=11;product=hexameric AAA+ MoxR family ATPase%2C putative molecular chaperone;protein_id=AAC76769.2;db_xref=GI:87082326;db_xref=ASAP:ABE-0012247;db_xref=UniProtKB/Swiss-Prot:P31473;db_xref=EcoGene:EG11731 EMBL gene 3931316 3933184 . + . ID=.8145;gene=kup;locus_tag=b3747;gene_synonym=ECK3741;gene_synonym=JW5609;gene_synonym=trkD;db_xref=EcoGene:EG11541 EMBL CDS 3931316 3933184 . + 0 ID=.8146;gene=kup;locus_tag=b3747;gene_synonym=ECK3741;gene_synonym=JW5609;gene_synonym=trkD;function=transport%3B Transport of small molecules: Cations;note=low affinity potassium transport system%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006970 - response to osmotic stress;codon_start=1;transl_table=11;product=potassium transporter;protein_id=AAT48204.1;db_xref=GI:48994960;db_xref=ASAP:ABE-0012251;db_xref=UniProtKB/Swiss-Prot:P63183;db_xref=EcoGene:EG11541 EMBL gene 3933351 3933770 . + . ID=.8147;gene=rbsD;locus_tag=b3748;gene_synonym=ECK3742;gene_synonym=JW5857;gene_synonym=rbsP;db_xref=EcoGene:EG10817 EMBL CDS 3933351 3933770 . + 0 ID=.8148;gene=rbsD;locus_tag=b3748;gene_synonym=ECK3742;gene_synonym=JW5857;gene_synonym=rbsP;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;experiment=N-terminus verified by Edman degradation: PMID 17895580;note=D-ribose high-affinity transport system%3B membrane-associated protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=D-ribose pyranase;protein_id=AAC76771.2;db_xref=GI:87082327;db_xref=ASAP:ABE-0012256;db_xref=UniProtKB/Swiss-Prot:P04982;db_xref=EcoGene:EG10817 EMBL gene 3933778 3935283 . + . ID=.8149;gene=rbsA;locus_tag=b3749;gene_synonym=ECK3743;gene_synonym=JW3728;gene_synonym=rbsP;gene_synonym=rbsT;db_xref=EcoGene:EG10814 EMBL CDS 3933778 3935283 . + 0 ID=.8150;gene=rbsA;locus_tag=b3749;gene_synonym=ECK3743;gene_synonym=JW3728;gene_synonym=rbsP;gene_synonym=rbsT;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;experiment=N-terminus verified by Edman degradation: PMID 3086314;note=ATP-binding component of D-ribose high-affinity transport system%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=D-ribose ABC transporter ATPase;protein_id=AAC76772.1;db_xref=GI:1790190;db_xref=ASAP:ABE-0012259;db_xref=UniProtKB/Swiss-Prot:P04983;db_xref=EcoGene:EG10814 EMBL gene 3935288 3936253 . + . ID=.8151;gene=rbsC;locus_tag=b3750;gene_synonym=ECK3744;gene_synonym=JW3729;gene_synonym=rbsP;gene_synonym=rbsT;db_xref=EcoGene:EG10816 EMBL CDS 3935288 3936253 . + 0 ID=.8152;gene=rbsC;locus_tag=b3750;gene_synonym=ECK3744;gene_synonym=JW3729;gene_synonym=rbsP;gene_synonym=rbsT;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=D-ribose high-affinity transport system%3B membrane component of ABC superfamily%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=D-ribose ABC transporter permease;protein_id=AAC76773.1;db_xref=GI:1790191;db_xref=ASAP:ABE-0012261;db_xref=UniProtKB/Swiss-Prot:P0AGI1;db_xref=EcoGene:EG10816 EMBL gene 3936278 3937168 . + . ID=.8153;gene=rbsB;locus_tag=b3751;gene_synonym=ECK3745;gene_synonym=JW3730;gene_synonym=prlB;gene_synonym=rbsP;db_xref=EcoGene:EG10815 EMBL CDS 3936278 3937168 . + 0 ID=.8154;gene=rbsB;locus_tag=b3751;gene_synonym=ECK3745;gene_synonym=JW3730;gene_synonym=prlB;gene_synonym=rbsP;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=D-ribose periplasmic binding protein%3B periplasmic-binding compoent of ABC superfamily%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=D-ribose ABC transporter periplasmic binding protein%3B ribose chemotaxis receptor;protein_id=AAC76774.1;db_xref=GI:1790192;db_xref=ASAP:ABE-0012264;db_xref=UniProtKB/Swiss-Prot:P02925;db_xref=EcoGene:EG10815 EMBL gene 3937294 3938223 . + . ID=.8155;gene=rbsK;locus_tag=b3752;gene_synonym=ECK3746;gene_synonym=JW3731;db_xref=EcoGene:EG10818 EMBL CDS 3937294 3938223 . + 0 ID=.8156;gene=rbsK;locus_tag=b3752;gene_synonym=ECK3746;gene_synonym=JW3731;ec_number=2.7.1.15;function=enzyme%3B Degradation of small molecules: Carbon compounds;experiment=N-terminus verified by Edman degradation: PMID 3011794;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=ribokinase;protein_id=AAC76775.1;db_xref=GI:1790193;db_xref=ASAP:ABE-0012266;db_xref=UniProtKB/Swiss-Prot:P0A9J6;db_xref=EcoGene:EG10818 EMBL gene 3938227 3939219 . + . ID=.8157;gene=rbsR;locus_tag=b3753;gene_synonym=ECK3747;gene_synonym=JW3732;db_xref=EcoGene:EG10819 EMBL CDS 3938227 3939219 . + 0 ID=.8158;gene=rbsR;locus_tag=b3753;gene_synonym=ECK3747;gene_synonym=JW3732;function=regulator%3B Degradation of small molecules: Carbon compounds;note=regulator for rbs operon%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=transcriptional repressor of ribose metabolism;protein_id=AAC76776.1;db_xref=GI:1790194;db_xref=ASAP:ABE-0012271;db_xref=UniProtKB/Swiss-Prot:P0ACQ0;db_xref=EcoGene:EG10819 EMBL gene 3939185 3940612 . - . ID=.8159;gene=hsrA;locus_tag=b3754;gene_synonym=ECK3748;gene_synonym=JW3733;gene_synonym=yieO;db_xref=EcoGene:EG11732 EMBL CDS 3939185 3940612 . - 0 ID=.8160;gene=hsrA;locus_tag=b3754;gene_synonym=ECK3748;gene_synonym=JW3733;gene_synonym=yieO;function=putative transport%3B Not classified;note=putative transport protein (MFS family)%3B high copy suppressor of RspA: relieves RspA-mediated reduction of sigma(S) levels%3B overexpression also reduces MetE activity%3B effect proposed to be via an elevation in levels of homocysteine%2C causing a concomitant increase in homocysteine thiolactone%3B overexpression has no effect on resistance to a variety of toxic compounds%3B overexpression has no effect on resistance to a variety of toxic compounds%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative multidrug or homocysteine efflux system;protein_id=AAC76777.1;db_xref=GI:1790195;db_xref=ASAP:ABE-0012273;db_xref=UniProtKB/Swiss-Prot:P31474;db_xref=EcoGene:EG11732 EMBL gene 3940635 3941327 . - . ID=.8161;gene=yieP;locus_tag=b3755;gene_synonym=ECK3749;gene_synonym=JW5608;db_xref=EcoGene:EG11733 EMBL CDS 3940635 3941327 . - 0 ID=.8162;gene=yieP;locus_tag=b3755;gene_synonym=ECK3749;gene_synonym=JW5608;codon_start=1;transl_table=11;product=putative transcriptional regulator;protein_id=AAT48205.1;db_xref=GI:48994961;db_xref=ASAP:ABE-0012275;db_xref=UniProtKB/Swiss-Prot:P31475;db_xref=EcoGene:EG11733 EMBL gene 3941808 3943349 . + . ID=.8163;gene=rrsC;locus_tag=b3756;gene_synonym=ECK3750;gene_synonym=JWR0082;db_xref=EcoGene:EG30086 EMBL rRNA 3941808 3943349 . + . ID=.8164;gene=rrsC;locus_tag=b3756;gene_synonym=ECK3750;gene_synonym=JWR0082;product=16S ribosomal RNA of rrnC operon;db_xref=ASAP:ABE-0012279;db_xref=EcoGene:EG30086 EMBL gene 3943435 3943510 . + . ID=.8165;gene=gltU;locus_tag=b3757;gene_synonym=ECK3751;gene_synonym=JWR0083;gene_synonym=tgtC;db_xref=EcoGene:EG30033 EMBL tRNA 3943435 3943510 . + . ID=.8166;gene=gltU;locus_tag=b3757;gene_synonym=ECK3751;gene_synonym=JWR0083;gene_synonym=tgtC;product=tRNA-Glu;note=anticodon: UUC;db_xref=ASAP:ABE-0012281;db_xref=EcoGene:EG30033 EMBL gene 3943704 3946607 . + . ID=.8167;gene=rrlC;locus_tag=b3758;gene_synonym=ECK3752;gene_synonym=JWR0084;db_xref=EcoGene:EG30079 EMBL rRNA 3943704 3946607 . + . ID=.8168;gene=rrlC;locus_tag=b3758;gene_synonym=ECK3752;gene_synonym=JWR0084;product=23S ribosomal RNA of rrnC operon;db_xref=ASAP:ABE-0012283;db_xref=EcoGene:EG30079 EMBL gene 3946700 3946819 . + . ID=.8169;gene=rrfC;locus_tag=b3759;gene_synonym=ECK3753;gene_synonym=JWR0085;db_xref=EcoGene:EG30072 EMBL rRNA 3946700 3946819 . + . ID=.8170;gene=rrfC;locus_tag=b3759;gene_synonym=ECK3753;gene_synonym=JWR0085;product=5S ribosomal RNA of rrnC operon;db_xref=ASAP:ABE-0012285;db_xref=EcoGene:EG30072 EMBL gene 3946872 3946948 . + . ID=.8171;gene=aspT;locus_tag=b3760;gene_synonym=ECK3754;gene_synonym=JWR0086;gene_synonym=tasC;db_xref=EcoGene:EG30023 EMBL tRNA 3946872 3946948 . + . ID=.8172;gene=aspT;locus_tag=b3760;gene_synonym=ECK3754;gene_synonym=JWR0086;gene_synonym=tasC;product=tRNA-Asp;note=anticodon: GUC;db_xref=ASAP:ABE-0012287;db_xref=EcoGene:EG30023 EMBL gene 3946957 3947032 . + . ID=.8173;gene=trpT;locus_tag=b3761;gene_synonym=ECK3755;gene_synonym=JWR0087;gene_synonym=su7;gene_synonym=su8;gene_synonym=su9;gene_synonym=supU;gene_synonym=supV;db_xref=EcoGene:EG30105 EMBL tRNA 3946957 3947032 . + . ID=.8174;gene=trpT;locus_tag=b3761;gene_synonym=ECK3755;gene_synonym=JWR0087;gene_synonym=su7;gene_synonym=su8;gene_synonym=su9;gene_synonym=supU;gene_synonym=supV;product=tRNA-Trp;note=anticodon: CCA;db_xref=ASAP:ABE-0012289;db_xref=EcoGene:EG30105 EMBL gene 3947128 3947967 . - . ID=.8175;gene=hdfR;locus_tag=b4480;gene_synonym=apeR?;gene_synonym=ECK3756;gene_synonym=JW5607;gene_synonym=yifA;gene_synonym=yifD;db_xref=EcoGene:EG11449 EMBL CDS 3947128 3947967 . - 0 ID=.8176;gene=hdfR;locus_tag=b4480;gene_synonym=apeR?;gene_synonym=ECK3756;gene_synonym=JW5607;gene_synonym=yifA;gene_synonym=yifD;function=regulator%3B Not classified;note=transcriptional regulator of the flhDC operon%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=flhDC operon transcriptional repressor;protein_id=AAT48206.1;db_xref=GI:48994962;db_xref=ASAP:ABE-0174109;db_xref=UniProtKB/Swiss-Prot:P0A8R9;db_xref=EcoGene:EG11449 EMBL gene 3948086 3948424 . + . ID=.8177;gene=yifE;locus_tag=b3764;gene_synonym=ECK3757;gene_synonym=JW3737;db_xref=EcoGene:EG11450 EMBL CDS 3948086 3948424 . + 0 ID=.8178;gene=yifE;locus_tag=b3764;gene_synonym=ECK3757;gene_synonym=JW3737;note=GO_process: GO:0006355 - regulation of transcription%2C DNA-dependent;codon_start=1;transl_table=11;product=UPF0438 family protein;protein_id=AAC77485.1;db_xref=GI:2367277;db_xref=ASAP:ABE-0012298;db_xref=UniProtKB/Swiss-Prot:P0ADN2;db_xref=EcoGene:EG11450 EMBL gene 3948449 3949969 . - . ID=.8179;gene=yifB;locus_tag=b3765;gene_synonym=ECK3758;gene_synonym=JW3738;db_xref=EcoGene:EG11260 EMBL CDS 3948449 3949969 . - 0 ID=.8180;gene=yifB;locus_tag=b3765;gene_synonym=ECK3758;gene_synonym=JW3738;function=putative regulator%3B Not classified;note=putative 2-component regulator;codon_start=1;transl_table=11;product=magnesium chelatase family protein and putative transcriptional regulator;protein_id=AAC77486.2;db_xref=GI:145693202;db_xref=ASAP:ABE-0012300;db_xref=UniProtKB/Swiss-Prot:P22787;db_xref=EcoGene:EG11260 EMBL gene 3950322 3950420 . + . ID=.8181;gene=ilvL;locus_tag=b3766;gene_synonym=ECK3759;gene_synonym=JW3739;db_xref=EcoGene:EG11270 EMBL CDS 3950322 3950420 . + 0 ID=.8182;gene=ilvL;locus_tag=b3766;gene_synonym=ECK3759;gene_synonym=JW3739;function=leader%3B Amino acid biosynthesis: Isoleucine%2C Valine;note=ilvGEDA operon leader peptide%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=ilvG operon leader peptide;protein_id=AAC77487.1;db_xref=GI:1790202;db_xref=ASAP:ABE-0012307;db_xref=UniProtKB/Swiss-Prot:P62522;db_xref=EcoGene:EG11270 EMBL gene 3950507 3950557 . + . ID=.8183;gene=ilvX;locus_tag=b4669;gene_synonym=ECK4484;db_xref=EcoGene:EG14474 EMBL CDS 3950507 3950557 . + 0 ID=.8184;gene=ilvX;locus_tag=b4669;gene_synonym=ECK4484;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=ACO60011.1;db_xref=GI:226510987;db_xref=UniProtKB/Swiss-Prot:C1P619;db_xref=EcoGene:EG14474 EMBL gene 3950560 3952204 . + . ID=.8185;gene=ilvG;locus_tag=b4488;gene_synonym=ECK3760;gene_synonym=ilvO;gene_synonym=JW3740;gene_synonym=JW3741;pseudo=true;db_xref=EcoGene:EG10498 EMBL biological_region 3950560 3952204 . + 0 ID=.8186;featflags=type:CDS;gene=ilvG;locus_tag=b4488;gene_synonym=ECK3760;gene_synonym=ilvO;gene_synonym=JW3740;gene_synonym=JW3741;note=pseudogene%2C acetolactate synthase 2 large subunit%2C valine-insensitive%3B acetolactate synthase II%2C large subunit%2C cryptic%2C interrupted;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0012309;db_xref=ASAP:ABE-0012311;db_xref=ASAP:ABE-0174552;db_xref=UniProtKB/Swiss-Prot:P00892;db_xref=EcoGene:EG10498 EMBL CDS 3950560 3951543 . + 0 Parent=.8186 EMBL CDS 3951542 3952204 . + 0 Parent=.8186 EMBL gene 3952201 3952464 . + . ID=.8189;gene=ilvM;locus_tag=b3769;gene_synonym=ECK3761;gene_synonym=JW3742;db_xref=EcoGene:EG10501 EMBL CDS 3952201 3952464 . + 0 ID=.8190;gene=ilvM;locus_tag=b3769;gene_synonym=ECK3761;gene_synonym=JW3742;ec_number=2.2.1.6;function=enzyme%3B Amino acid biosynthesis: Isoleucine%2C Valine;note=acetolactate synthase II%2C valine insensitive%2C small subunit;codon_start=1;transl_table=11;product=acetolactate synthase 2 small subunit;protein_id=AAC77489.1;db_xref=GI:1790204;db_xref=ASAP:ABE-0012313;db_xref=UniProtKB/Swiss-Prot:P0ADG1;db_xref=EcoGene:EG10501 EMBL gene 3952484 3953413 . + . ID=.8191;gene=ilvE;locus_tag=b3770;gene_synonym=ECK3762;gene_synonym=JW5606;db_xref=EcoGene:EG10497 EMBL CDS 3952484 3953413 . + 0 ID=.8192;gene=ilvE;locus_tag=b3770;gene_synonym=ECK3762;gene_synonym=JW5606;ec_number=2.6.1.42;function=enzyme%3B Amino acid biosynthesis: Isoleucine%2C Valine;note=GO_process: GO:0006523 - alanine biosynthetic process%3B GO_process: GO:0009098 - leucine biosynthetic process;codon_start=1;transl_table=11;product=branched-chain amino acid aminotransferase;protein_id=AAT48207.1;db_xref=GI:48994963;db_xref=ASAP:ABE-0012316;db_xref=UniProtKB/Swiss-Prot:P0AB80;db_xref=EcoGene:EG10497 EMBL gene 3953478 3955328 . + . ID=.8193;gene=ilvD;locus_tag=b3771;gene_synonym=ECK3763;gene_synonym=JW5605;db_xref=EcoGene:EG10496 EMBL CDS 3953478 3955328 . + 0 ID=.8194;gene=ilvD;locus_tag=b3771;gene_synonym=ECK3763;gene_synonym=JW5605;ec_number=4.2.1.9;function=enzyme%3B Amino acid biosynthesis: Isoleucine%2C Valine;codon_start=1;transl_table=11;product=dihydroxyacid dehydratase;protein_id=AAT48208.1;db_xref=GI:48994964;db_xref=ASAP:ABE-0012318;db_xref=UniProtKB/Swiss-Prot:P05791;db_xref=EcoGene:EG10496 EMBL gene 3955331 3956875 . + . ID=.8195;gene=ilvA;locus_tag=b3772;gene_synonym=ECK3764;gene_synonym=JW3745;db_xref=EcoGene:EG10493 EMBL CDS 3955331 3956875 . + 0 ID=.8196;gene=ilvA;locus_tag=b3772;gene_synonym=ECK3764;gene_synonym=JW3745;ec_number=4.3.1.19;function=enzyme%3B Amino acid biosynthesis: Isoleucine%2C Valine;note=threonine deaminase (dehydratase);codon_start=1;transl_table=11;product=l-threonine dehydratase%2C biosynthetic%3B also known as threonine deaminase;protein_id=AAC77492.1;db_xref=GI:1790207;db_xref=ASAP:ABE-0012321;db_xref=UniProtKB/Swiss-Prot:P04968;db_xref=EcoGene:EG10493 EMBL repeat_region 3956884 3956909 . + . ID=.8197;note=REP285 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 3956927 3957820 . - . ID=.8198;gene=ilvY;locus_tag=b3773;gene_synonym=ECK3765;gene_synonym=JW3746;db_xref=EcoGene:EG10503 EMBL CDS 3956927 3957820 . - 0 ID=.8199;gene=ilvY;locus_tag=b3773;gene_synonym=ECK3765;gene_synonym=JW3746;function=regulator%3B Amino acid biosynthesis: Isoleucine%2C Valine;note=positive regulator for ilvC%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=transcriptional activator of ilvC%3B autorepressor;protein_id=AAC77493.1;db_xref=GI:1790208;db_xref=ASAP:ABE-0012323;db_xref=UniProtKB/Swiss-Prot:P05827;db_xref=EcoGene:EG10503 EMBL gene 3957970 3959445 . + . ID=.8200;gene=ilvC;locus_tag=b3774;gene_synonym=ECK3766;gene_synonym=JW3747;db_xref=EcoGene:EG10495 EMBL CDS 3957970 3959445 . + 0 ID=.8201;gene=ilvC;locus_tag=b3774;gene_synonym=ECK3766;gene_synonym=JW3747;ec_number=1.1.1.86;function=enzyme%3B Amino acid biosynthesis: Isoleucine%2C Valine;note=ketol-acid reductoisomerase%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=ketol-acid reductoisomerase%2C NAD(P)-binding;protein_id=AAC76779.1;db_xref=GI:1790210;db_xref=ASAP:ABE-0012331;db_xref=UniProtKB/Swiss-Prot:P05793;db_xref=EcoGene:EG10495 EMBL gene 3959532 3959813 . - . ID=.8202;gene=ppiC;locus_tag=b3775;gene_synonym=ECK3767;gene_synonym=JW3748;gene_synonym=parvA;db_xref=EcoGene:EG12352 EMBL CDS 3959532 3959813 . - 0 ID=.8203;gene=ppiC;locus_tag=b3775;gene_synonym=ECK3767;gene_synonym=JW3748;gene_synonym=parvA;ec_number=5.2.1.8;function=enzyme%3B Proteins - translation and modification;note=GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=peptidyl-prolyl cis-trans isomerase C (rotamase C);protein_id=AAC76780.1;db_xref=GI:1790211;db_xref=ASAP:ABE-0012334;db_xref=UniProtKB/Swiss-Prot:P0A9L5;db_xref=EcoGene:EG12352 EMBL gene 3960012 3960460 . - . ID=.8204;gene=yifN;locus_tag=b3777;gene_synonym=ECK3768;gene_synonym=JW3749;gene_synonym=yifO;pseudo=true;db_xref=EcoGene:EG14339 EMBL biological_region 3960012 3960460 . - 0 ID=.8205;featflags=type:CDS;gene=yifN;locus_tag=b3777;gene_synonym=ECK3768;gene_synonym=JW3749;gene_synonym=yifO;note=PemK toxin family pseudogene;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0012338;db_xref=ASAP:ABE-0012340;db_xref=UniProtKB/Swiss-Prot:P56259;db_xref=EcoGene:EG14339 EMBL CDS 3960012 3960254 . - 0 Parent=.8205 EMBL CDS 3960254 3960460 . - 0 Parent=.8205 EMBL gene 3960677 3962698 . + . ID=.8208;gene=rep;locus_tag=b3778;gene_synonym=dasC;gene_synonym=ECK3770;gene_synonym=JW5604;gene_synonym=mbrA;gene_synonym=mmrA?;db_xref=EcoGene:EG10837 EMBL CDS 3960677 3962698 . + 0 ID=.8209;gene=rep;locus_tag=b3778;gene_synonym=dasC;gene_synonym=ECK3770;gene_synonym=JW5604;gene_synonym=mbrA;gene_synonym=mmrA?;ec_number=3.6.1.-;function=enzyme%3B DNA - replication%2C repair%2C restriction/modification;experiment=N-terminus verified by Edman degradation: PMID 2999067;note=rep helicase%2C a single-stranded DNA dependent ATPase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006261 - DNA-dependent DNA replication;codon_start=1;transl_table=11;product=DNA helicase and single-stranded DNA-dependent ATPase;protein_id=AAT48209.1;db_xref=GI:48994965;db_xref=ASAP:ABE-0012344;db_xref=UniProtKB/Swiss-Prot:P09980;db_xref=EcoGene:EG10837 EMBL repeat_region 3962700 3962735 . + . ID=.8210;note=REP286 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 3962745 3964229 . - . ID=.8211;gene=gpp;locus_tag=b3779;gene_synonym=ECK3771;gene_synonym=gppA;gene_synonym=JW5603;db_xref=EcoGene:EG10413 EMBL CDS 3962745 3964229 . - 0 ID=.8212;gene=gpp;locus_tag=b3779;gene_synonym=ECK3771;gene_synonym=gppA;gene_synonym=JW5603;ec_number=3.6.1.11;ec_number=3.6.1.40;function=enzyme%3B Global regulatory functions;note=guanosine pentaphosphatase%3B exopolyphosphatase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion%3B GO_process: GO:0006793 - phosphorus metabolic process%3B GO_process: GO:0042594 - response to starvation;codon_start=1;transl_table=11;product=guanosine pentaphosphatase/exopolyphosphatase;protein_id=AAT48210.1;db_xref=GI:48994966;db_xref=ASAP:ABE-0012347;db_xref=UniProtKB/Swiss-Prot:P25552;db_xref=EcoGene:EG10413 EMBL gene 3964365 3965630 . - . ID=.8213;gene=rhlB;locus_tag=b3780;gene_synonym=ECK3772;gene_synonym=JW3753;gene_synonym=mmrA?;db_xref=EcoGene:EG10844 EMBL CDS 3964365 3965630 . - 0 ID=.8214;gene=rhlB;locus_tag=b3780;gene_synonym=ECK3772;gene_synonym=JW3753;gene_synonym=mmrA?;function=putative enzyme%3B Not classified;note=putative ATP-dependent RNA helicase;codon_start=1;transl_table=11;product=ATP-dependent RNA helicase;protein_id=AAC76785.1;db_xref=GI:1790214;db_xref=ASAP:ABE-0012351;db_xref=UniProtKB/Swiss-Prot:P0A8J8;db_xref=EcoGene:EG10844 EMBL gene 3965761 3966090 . + . ID=.8215;gene=trxA;locus_tag=b3781;gene_synonym=dasC;gene_synonym=ECK3773;gene_synonym=fip;gene_synonym=fipA;gene_synonym=JW5856;gene_synonym=tsnC;db_xref=EcoGene:EG11031 EMBL CDS 3965761 3966090 . + 0 ID=.8216;gene=trxA;locus_tag=b3781;gene_synonym=dasC;gene_synonym=ECK3773;gene_synonym=fip;gene_synonym=fipA;gene_synonym=JW5856;gene_synonym=tsnC;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Thioredoxin%2C glutaredoxin%2C glutathione;codon_start=1;transl_table=11;product=thioredoxin 1;protein_id=AAC76786.2;db_xref=GI:87082331;db_xref=ASAP:ABE-0012357;db_xref=UniProtKB/Swiss-Prot:P0AA25;db_xref=EcoGene:EG11031 EMBL gene 3966417 3967676 . + . ID=.8217;gene=rho;locus_tag=b3783;gene_synonym=ECK3775;gene_synonym=hdf;gene_synonym=JW3756;gene_synonym=nitA;gene_synonym=nusD;gene_synonym=psuA;gene_synonym=rnsC;gene_synonym=sbaA;gene_synonym=sun;gene_synonym=tabC;gene_synonym=tsu;db_xref=EcoGene:EG10845 EMBL CDS 3966417 3967676 . + 0 ID=.8218;gene=rho;locus_tag=b3783;gene_synonym=ECK3775;gene_synonym=hdf;gene_synonym=JW3756;gene_synonym=nitA;gene_synonym=nusD;gene_synonym=psuA;gene_synonym=rnsC;gene_synonym=sbaA;gene_synonym=sun;gene_synonym=tabC;gene_synonym=tsu;function=factor%3B RNA synthesis%2C modification%2C DNA transcription;experiment=N-terminus verified by Edman degradation: PMID 6219230%2C9298646%2C9723924;note=transcription termination factor Rho%3B polarity suppressor%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=transcription termination factor;protein_id=AAC76788.1;db_xref=GI:1790217;db_xref=ASAP:ABE-0012362;db_xref=UniProtKB/Swiss-Prot:P0AG30;db_xref=EcoGene:EG10845 EMBL gene 3967916 3969019 . + . ID=.8219;gene=wecA;locus_tag=b3784;gene_synonym=ECK3776;gene_synonym=JW3758;gene_synonym=rfe;db_xref=EcoGene:EG10840 EMBL CDS 3967916 3969019 . + 0 ID=.8220;gene=wecA;locus_tag=b3784;gene_synonym=ECK3776;gene_synonym=JW3758;gene_synonym=rfe;ec_number=2.4.1.-;function=enzyme%3B Central intermediary metabolism: Sugar-nucleotide biosynthesis%2C conversions;note=GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0009246 - enterobacterial common antigen biosynthetic process;codon_start=1;transl_table=11;product=UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase;protein_id=AAC76789.1;db_xref=GI:1790218;db_xref=ASAP:ABE-0012366;db_xref=UniProtKB/Swiss-Prot:P0AC78;db_xref=EcoGene:EG10840 EMBL gene 3969031 3970077 . + . ID=.8221;gene=wzzE;locus_tag=b3785;gene_synonym=ECK3777;gene_synonym=JW5601;gene_synonym=metNSt;gene_synonym=wzz;gene_synonym=yifC;db_xref=EcoGene:EG11295 EMBL CDS 3969031 3970077 . + 0 ID=.8222;gene=wzzE;locus_tag=b3785;gene_synonym=ECK3777;gene_synonym=JW5601;gene_synonym=metNSt;gene_synonym=wzz;gene_synonym=yifC;function=putative transport%3B Not classified;note=modulator of enterobacterial common antigen (ECA) polysaccharide chain length%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0009246 - enterobacterial common antigen biosynthetic process;codon_start=1;transl_table=11;product=Entobacterial Common Antigen (ECA) polysaccharide chain length modulation protein;protein_id=AAC76790.2;db_xref=GI:87082332;db_xref=ASAP:ABE-0012370;db_xref=UniProtKB/Swiss-Prot:P0AG00;db_xref=EcoGene:EG11295 EMBL gene 3970133 3971263 . + . ID=.8223;gene=wecB;locus_tag=b3786;gene_synonym=ECK3778;gene_synonym=JW5600;gene_synonym=nfrC;gene_synonym=rffE;gene_synonym=yifF;db_xref=EcoGene:EG11451 EMBL CDS 3970133 3971263 . + 0 ID=.8224;gene=wecB;locus_tag=b3786;gene_synonym=ECK3778;gene_synonym=JW5600;gene_synonym=nfrC;gene_synonym=rffE;gene_synonym=yifF;ec_number=5.1.3.14;function=enzyme%3B Central intermediary metabolism: Sugar-nucleotide biosynthesis%2C conversions;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0009246 - enterobacterial common antigen biosynthetic process;codon_start=1;transl_table=11;product=UDP-N-acetyl glucosamine-2-epimerase;protein_id=AAT48211.1;db_xref=GI:48994967;db_xref=ASAP:ABE-0012372;db_xref=UniProtKB/Swiss-Prot:P27828;db_xref=EcoGene:EG11451 EMBL gene 3971260 3972522 . + . ID=.8225;gene=wecC;locus_tag=b3787;gene_synonym=ECK3779;gene_synonym=JW5599;gene_synonym=rff;gene_synonym=rffD;db_xref=EcoGene:EG11452 EMBL CDS 3971260 3972522 . + 0 ID=.8226;gene=wecC;locus_tag=b3787;gene_synonym=ECK3779;gene_synonym=JW5599;gene_synonym=rff;gene_synonym=rffD;ec_number=1.1.1.-;function=enzyme%3B Central intermediary metabolism: Sugar-nucleotide biosynthesis%2C conversions;note=UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase%3B synthesis of enterobacterial common antigen (ECA)%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0009246 - enterobacterial common antigen biosynthetic process;codon_start=1;transl_table=11;product=UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase;protein_id=AAT48212.1;db_xref=GI:48994968;db_xref=ASAP:ABE-0012374;db_xref=UniProtKB/Swiss-Prot:P27829;db_xref=EcoGene:EG11452 EMBL gene 3972522 3973589 . + . ID=.8227;gene=rffG;locus_tag=b3788;gene_synonym=ECK3780;gene_synonym=JW5598;gene_synonym=rff;db_xref=EcoGene:EG11453 EMBL CDS 3972522 3973589 . + 0 ID=.8228;gene=rffG;locus_tag=b3788;gene_synonym=ECK3780;gene_synonym=JW5598;gene_synonym=rff;ec_number=4.2.1.46;function=enzyme%3B Central intermediary metabolism: Sugar-nucleotide biosynthesis%2C conversions;note=GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0009243 - O antigen biosynthetic process%3B GO_process: GO:0009246 - enterobacterial common antigen biosynthetic process%3B GO_process: GO:0009435 - NAD biosynthetic process;codon_start=1;transl_table=11;product=dTDP-glucose 4%2C6-dehydratase;protein_id=AAT48213.1;db_xref=GI:48994969;db_xref=ASAP:ABE-0012376;db_xref=UniProtKB/Swiss-Prot:P27830;db_xref=EcoGene:EG11453 EMBL gene 3973608 3974489 . + . ID=.8229;gene=rffH;locus_tag=b3789;gene_synonym=ECK3781;gene_synonym=JW3763;gene_synonym=yifG;db_xref=EcoGene:EG11454 EMBL CDS 3973608 3974489 . + 0 ID=.8230;gene=rffH;locus_tag=b3789;gene_synonym=ECK3781;gene_synonym=JW3763;gene_synonym=yifG;ec_number=2.7.7.24;function=enzyme%3B Central intermediary metabolism: Sugar-nucleotide biosynthesis%2C conversions;note=GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0009243 - O antigen biosynthetic process%3B GO_process: GO:0009246 - enterobacterial common antigen biosynthetic process;codon_start=1;transl_table=11;product=glucose-1-phosphate thymidylyltransferase;protein_id=AAC76794.1;db_xref=GI:1790224;db_xref=ASAP:ABE-0012379;db_xref=UniProtKB/Swiss-Prot:P61887;db_xref=EcoGene:EG11454 EMBL gene 3974467 3975141 . + . ID=.8231;gene=wecD;locus_tag=b3790;gene_synonym=ECK3782;gene_synonym=JW5597;gene_synonym=rff;gene_synonym=rffC;gene_synonym=yifH;db_xref=EcoGene:EG11455 EMBL CDS 3974467 3975141 . + 0 ID=.8232;gene=wecD;locus_tag=b3790;gene_synonym=ECK3782;gene_synonym=JW5597;gene_synonym=rff;gene_synonym=rffC;gene_synonym=yifH;note=putative acyltransferase%2C lipopolysaccharide biosynthesis protein%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0009244 - lipopolysaccharide core region biosynthetic process;codon_start=1;transl_table=11;product=TDP-fucosamine acetyltransferase;protein_id=AAT48214.2;db_xref=GI:145693203;db_xref=ASAP:ABE-0012382;db_xref=UniProtKB/Swiss-Prot:P27832;db_xref=EcoGene:EG11455 EMBL gene 3975146 3976276 . + . ID=.8233;gene=wecE;locus_tag=b3791;gene_synonym=ECK3783;gene_synonym=JW3765;gene_synonym=rff;gene_synonym=rffA;gene_synonym=yifI;db_xref=EcoGene:EG11456 EMBL CDS 3975146 3976276 . + 0 ID=.8234;gene=wecE;locus_tag=b3791;gene_synonym=ECK3783;gene_synonym=JW3765;gene_synonym=rff;gene_synonym=rffA;gene_synonym=yifI;ec_number=2.6.1.-;note=GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0009246 - enterobacterial common antigen biosynthetic process;codon_start=1;transl_table=11;product=TDP-4-oxo-6-deoxy-D-glucose transaminase;protein_id=AAC76796.1;db_xref=GI:2367285;db_xref=ASAP:ABE-0012384;db_xref=UniProtKB/Swiss-Prot:P27833;db_xref=EcoGene:EG11456 EMBL gene 3976278 3977528 . + . ID=.8235;gene=wzxE;locus_tag=b3792;gene_synonym=ECK3784;gene_synonym=JW3766;gene_synonym=wzx;gene_synonym=yifJ;db_xref=EcoGene:EG11486 EMBL CDS 3976278 3977528 . + 0 ID=.8236;gene=wzxE;locus_tag=b3792;gene_synonym=ECK3784;gene_synonym=JW3766;gene_synonym=wzx;gene_synonym=yifJ;function=putative carrier%3B Not classified;note=O-antigen translocase in LPS biosynthesis%3B GO_process: GO:0017004 - cytochrome complex assembly;codon_start=1;transl_table=11;product=O-antigen translocase;protein_id=AAC76797.1;db_xref=GI:1790227;db_xref=ASAP:ABE-0012386;db_xref=UniProtKB/Swiss-Prot:P0AAA7;db_xref=EcoGene:EG11486 EMBL gene 3977525 3978604 . + . ID=.8237;gene=wecF;locus_tag=b4481;gene_synonym=ECK3785;gene_synonym=JW5596;gene_synonym=rff;gene_synonym=rffT;gene_synonym=yifM;db_xref=EcoGene:EG14320 EMBL CDS 3977525 3978604 . + 0 ID=.8238;gene=wecF;locus_tag=b4481;gene_synonym=ECK3785;gene_synonym=JW5596;gene_synonym=rff;gene_synonym=rffT;gene_synonym=yifM;ec_number=2.4.1.-;note=TDP-Fuc4NAc:lipidII transferase;codon_start=1;transl_table=11;product=TDP-Fuc4NAc:lipidIIFuc4NAc transferase;protein_id=AAT48215.1;db_xref=GI:48994971;db_xref=ASAP:ABE-0174115;db_xref=UniProtKB/Swiss-Prot:P56258;db_xref=EcoGene:EG14320 EMBL gene 3978601 3979953 . + . ID=.8239;gene=wzyE;locus_tag=b3793;gene_synonym=ECK3786;gene_synonym=JW3769;gene_synonym=rffT;db_xref=EcoGene:EG11457 EMBL CDS 3978601 3979953 . + 0 ID=.8240;gene=wzyE;locus_tag=b3793;gene_synonym=ECK3786;gene_synonym=JW3769;gene_synonym=rffT;function=enzyme%3B Central intermediary metabolism: Sugar-nucleotide biosynthesis%2C conversions;note=putative ECA polymerization protein%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0009246 - enterobacterial common antigen biosynthetic process;codon_start=1;transl_table=11;product=putative ECA polysaccharide chain elongation protein;protein_id=AAC76800.1;db_xref=GI:2367288;db_xref=ASAP:ABE-0012392;db_xref=UniProtKB/Swiss-Prot:P27835;db_xref=EcoGene:EG11457 EMBL gene 3979956 3980696 . + . ID=.8241;gene=wecG;locus_tag=b3794;gene_synonym=ECK3787;gene_synonym=JW3770;gene_synonym=rff;gene_synonym=rffM;db_xref=EcoGene:EG11458 EMBL CDS 3979956 3980696 . + 0 ID=.8242;gene=wecG;locus_tag=b3794;gene_synonym=ECK3787;gene_synonym=JW3770;gene_synonym=rff;gene_synonym=rffM;function=enzyme%3B Central intermediary metabolism: Sugar-nucleotide biosynthesis%2C conversions;note=probable UDP-N-acetyl-D-mannosaminuronic acid transferase%3B synthesis of enterobacterial common antigen (ECA)%3B GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0009246 - enterobacterial common antigen biosynthetic process;codon_start=1;transl_table=11;product=UDP-N-acetyl-D-mannosaminuronic acid transferase;protein_id=AAC76801.1;db_xref=GI:2367289;db_xref=ASAP:ABE-0012394;db_xref=UniProtKB/Swiss-Prot:P27836;db_xref=EcoGene:EG11458 EMBL gene 3980887 3982272 . + . ID=.8243;gene=yifK;locus_tag=b3795;gene_synonym=ECK3788;gene_synonym=JW5595;db_xref=EcoGene:EG11459 EMBL CDS 3980887 3982272 . + 0 ID=.8244;gene=yifK;locus_tag=b3795;gene_synonym=ECK3788;gene_synonym=JW5595;function=putative transport%3B Not classified;note=putative amino acid/amine transport protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative APC family amino acid transporter;protein_id=AAT48216.1;db_xref=GI:48994972;db_xref=ASAP:ABE-0012397;db_xref=UniProtKB/Swiss-Prot:P27837;db_xref=EcoGene:EG11459 EMBL gene 3982375 3982451 . + . ID=.8245;gene=argX;locus_tag=b3796;gene_synonym=ECK3789;gene_synonym=JWR0088;db_xref=EcoGene:EG30017 EMBL tRNA 3982375 3982451 . + . ID=.8246;gene=argX;locus_tag=b3796;gene_synonym=ECK3789;gene_synonym=JWR0088;product=tRNA-Arg;note=anticodon: CCG;db_xref=ASAP:ABE-0012399;db_xref=EcoGene:EG30017 EMBL gene 3982509 3982585 . + . ID=.8247;gene=hisR;locus_tag=b3797;gene_synonym=ECK3790;gene_synonym=JWR0089;db_xref=EcoGene:EG30042 EMBL tRNA 3982509 3982585 . + . ID=.8248;gene=hisR;locus_tag=b3797;gene_synonym=ECK3790;gene_synonym=JWR0089;product=tRNA-His;note=anticodon: GUG;db_xref=ASAP:ABE-0012401;db_xref=EcoGene:EG30042 EMBL gene 3982606 3982692 . + . ID=.8249;gene=leuT;locus_tag=b3798;gene_synonym=ECK3791;gene_synonym=JWR0090;db_xref=EcoGene:EG30049 EMBL tRNA 3982606 3982692 . + . ID=.8250;gene=leuT;locus_tag=b3798;gene_synonym=ECK3791;gene_synonym=JWR0090;product=tRNA-Leu;note=anticodon: CAG;db_xref=ASAP:ABE-0012403;db_xref=EcoGene:EG30049 EMBL gene 3982735 3982811 . + . ID=.8251;gene=proM;locus_tag=b3799;gene_synonym=ECK3792;gene_synonym=JWR0091;gene_synonym=proU;db_xref=EcoGene:EG30068 EMBL tRNA 3982735 3982811 . + . ID=.8252;gene=proM;locus_tag=b3799;gene_synonym=ECK3792;gene_synonym=JWR0091;gene_synonym=proU;product=tRNA-Pro;note=anticodon: UGG;db_xref=ASAP:ABE-0012405;db_xref=EcoGene:EG30068 EMBL gene 3982958 3984193 . + . ID=.8253;gene=aslB;locus_tag=b3800;gene_synonym=atsB;gene_synonym=ECK3793;gene_synonym=gppB;gene_synonym=JW5594;db_xref=EcoGene:EG10090 EMBL CDS 3982958 3984193 . + 0 ID=.8254;gene=aslB;locus_tag=b3800;gene_synonym=atsB;gene_synonym=ECK3793;gene_synonym=gppB;gene_synonym=JW5594;function=regulator%3B Not classified;note=putative arylsulfatase regulator%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006790 - sulfur metabolic process%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=putative AslA-specific sulfatase-maturating enzyme;protein_id=AAT48217.1;db_xref=GI:48994973;db_xref=ASAP:ABE-0012408;db_xref=UniProtKB/Swiss-Prot:P25550;db_xref=EcoGene:EG10090 EMBL repeat_region 3984220 3984323 . + . ID=.8255;note=RIP287 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 3984352 3986007 . - . ID=.8256;gene=aslA;locus_tag=b3801;gene_synonym=atsA;gene_synonym=ECK3794;gene_synonym=gppB;gene_synonym=JW3773;db_xref=EcoGene:EG10089 EMBL CDS 3984352 3986007 . - 0 ID=.8257;gene=aslA;locus_tag=b3801;gene_synonym=atsA;gene_synonym=ECK3794;gene_synonym=gppB;gene_synonym=JW3773;ec_number=3.1.6.1;function=enzyme%3B Central intermediary metabolism: Sulfur metabolism;note=arylsulfatase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006790 - sulfur metabolic process;codon_start=1;transl_table=11;product=putative Ser-type periplasmic non-aryl sulfatase;protein_id=AAC76804.1;db_xref=GI:1790233;db_xref=ASAP:ABE-0012411;db_xref=UniProtKB/Swiss-Prot:P25549;db_xref=EcoGene:EG10089 EMBL gene 3986432 3986638 . + . ID=.8258;gene=glmZ;locus_tag=b4456;gene_synonym=ECK3795;gene_synonym=JWR0257;gene_synonym=k19;gene_synonym=psrA20;gene_synonym=ryiA;gene_synonym=sraJ;db_xref=EcoGene:EG31165 EMBL ncRNA 3986432 3986638 . + . ID=.8259;ncrna_class=antisense_RNA;gene=glmZ;locus_tag=b4456;gene_synonym=ECK3795;gene_synonym=JWR0257;gene_synonym=k19;gene_synonym=psrA20;gene_synonym=ryiA;gene_synonym=sraJ;product=sRNA antisense activator of glmS mRNA%2C Hfq-dependent;note=identified in a large scale screen;db_xref=ASAP:ABE-0047274;db_xref=EcoGene:EG31165 EMBL gene 3986686 3987882 . - . ID=.8260;gene=hemY;locus_tag=b3802;gene_synonym=ECK3796;gene_synonym=JW3774;db_xref=EcoGene:EG10434 EMBL CDS 3986686 3987882 . - 0 ID=.8261;gene=hemY;locus_tag=b3802;gene_synonym=ECK3796;gene_synonym=JW3774;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Heme%2C porphyrin;note=a late step of protoheme IX synthesis;codon_start=1;transl_table=11;product=putative protoheme IX synthesis protein;protein_id=AAC76805.1;db_xref=GI:1790234;db_xref=ASAP:ABE-0012417;db_xref=UniProtKB/Swiss-Prot:P0ACB7;db_xref=EcoGene:EG10434 EMBL gene 3987885 3989066 . - . ID=.8262;gene=hemX;locus_tag=b3803;gene_synonym=ECK3797;gene_synonym=JW3775;db_xref=EcoGene:EG10433 EMBL CDS 3987885 3989066 . - 0 ID=.8263;gene=hemX;locus_tag=b3803;gene_synonym=ECK3797;gene_synonym=JW3775;ec_number=2.1.1.107;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Heme%2C porphyrin;experiment=N-terminus verified by Edman degradation: PMID 9298646;note=uroporphyrinogen III methylase;codon_start=1;transl_table=11;product=putative uroporphyrinogen III methyltransferase;protein_id=AAC76806.1;db_xref=GI:1790235;db_xref=ASAP:ABE-0012419;db_xref=UniProtKB/Swiss-Prot:P09127;db_xref=EcoGene:EG10433 EMBL gene 3989088 3989828 . - . ID=.8264;gene=hemD;locus_tag=b3804;gene_synonym=ECK3798;gene_synonym=JW3776;db_xref=EcoGene:EG10430 EMBL CDS 3989088 3989828 . - 0 ID=.8265;gene=hemD;locus_tag=b3804;gene_synonym=ECK3798;gene_synonym=JW3776;ec_number=4.2.1.75;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Heme%2C porphyrin;codon_start=1;transl_table=11;product=uroporphyrinogen III synthase;protein_id=AAC76807.1;db_xref=GI:1790236;db_xref=ASAP:ABE-0012425;db_xref=UniProtKB/Swiss-Prot:P09126;db_xref=EcoGene:EG10430 EMBL gene 3989825 3990766 . - . ID=.8266;gene=hemC;locus_tag=b3805;gene_synonym=ECK3799;gene_synonym=JW5932;gene_synonym=popE;db_xref=EcoGene:EG10429 EMBL CDS 3989825 3990766 . - 0 ID=.8267;gene=hemC;locus_tag=b3805;gene_synonym=ECK3799;gene_synonym=JW5932;gene_synonym=popE;ec_number=2.5.1.61;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Heme%2C porphyrin;experiment=N-terminus verified by Edman degradation: PMID 3052434;note=porphobilinogen deaminase %3D hydroxymethylbilane synthase;codon_start=1;transl_table=11;product=hydroxymethylbilane synthase;protein_id=AAT48218.1;db_xref=GI:48994974;db_xref=ASAP:ABE-0012427;db_xref=UniProtKB/Swiss-Prot:P06983;db_xref=EcoGene:EG10429 EMBL gene 3991153 3993699 . + . ID=.8268;gene=cyaA;locus_tag=b3806;gene_synonym=cya;gene_synonym=ECK3800;gene_synonym=JW3778;db_xref=EcoGene:EG10170 EMBL CDS 3991153 3993699 . + 0 ID=.8269;gene=cyaA;locus_tag=b3806;gene_synonym=cya;gene_synonym=ECK3800;gene_synonym=JW3778;ec_number=4.6.1.1;function=enzyme%3B Global regulatory functions;experiment=N-terminus verified by Edman degradation: PMID 6427472;note=GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=adenylate cyclase;protein_id=AAC76809.1;db_xref=GI:1790238;db_xref=ASAP:ABE-0012432;db_xref=UniProtKB/Swiss-Prot:P00936;db_xref=EcoGene:EG10170 EMBL gene 3993739 3994059 . - . ID=.8270;gene=cyaY;locus_tag=b3807;gene_synonym=ECK3801;gene_synonym=JW3779;db_xref=EcoGene:EG11653 EMBL CDS 3993739 3994059 . - 0 ID=.8271;gene=cyaY;locus_tag=b3807;gene_synonym=ECK3801;gene_synonym=JW3779;function=putative factor%3B Chaperones;note=iron-binding frataxin homolog%3B cyaY is expressed%3B neither knock-out nor overexpression of cyaY in Escherichia coli affects cellular iron content or sensitivity to oxidants%3B possibly involved in maintaining the intracellular iron pool in a soluble%2C non-toxic and bio-available form for biosynthetic pathways%2C while preventing the participation of iron in oxidative damage;codon_start=1;transl_table=11;product=iron-dependent inhibitor of iron-sulfur cluster formation%3B frataxin%3B iron-binding and oxidizing protein;protein_id=AAC76810.1;db_xref=GI:1790239;db_xref=ASAP:ABE-0012435;db_xref=UniProtKB/Swiss-Prot:P27838;db_xref=EcoGene:EG11653 EMBL gene 3994522 3994725 . + . ID=.8272;gene=yifL;locus_tag=b4558;gene_synonym=ECK3803;gene_synonym=JW3781;db_xref=EcoGene:EG12353 EMBL CDS 3994522 3994725 . + 0 ID=.8273;gene=yifL;locus_tag=b4558;gene_synonym=ECK3803;gene_synonym=JW3781;codon_start=1;transl_table=11;product=putative lipoprotein;protein_id=ABD18710.1;db_xref=GI:87082333;db_xref=ASAP:ABE-0285079;db_xref=UniProtKB/Swiss-Prot:P0ADN6;db_xref=EcoGene:EG12353 EMBL gene 3994762 3995586 . + . ID=.8274;gene=dapF;locus_tag=b3809;gene_synonym=ECK3804;gene_synonym=JW5592;db_xref=EcoGene:EG10209 EMBL CDS 3994762 3995586 . + 0 ID=.8275;gene=dapF;locus_tag=b3809;gene_synonym=ECK3804;gene_synonym=JW5592;ec_number=5.1.1.7;function=enzyme%3B Amino acid biosynthesis: Lysine;experiment=N-terminus verified by Edman degradation: PMID 3031013;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009089 - lysine biosynthetic process via diaminopimelate;codon_start=1;transl_table=11;product=diaminopimelate epimerase;protein_id=AAC76812.2;db_xref=GI:87082334;db_xref=ASAP:ABE-0012442;db_xref=UniProtKB/Swiss-Prot:P0A6K1;db_xref=EcoGene:EG10209 EMBL gene 3995583 3996290 . + . ID=.8276;gene=yigA;locus_tag=b3810;gene_synonym=ECK3805;gene_synonym=JW3783;db_xref=EcoGene:EG11201 EMBL CDS 3995583 3996290 . + 0 ID=.8277;gene=yigA;locus_tag=b3810;gene_synonym=ECK3805;gene_synonym=JW3783;codon_start=1;transl_table=11;product=DUF484 family protein;protein_id=AAC76813.1;db_xref=GI:1790243;db_xref=ASAP:ABE-0012444;db_xref=UniProtKB/Swiss-Prot:P23305;db_xref=EcoGene:EG11201 EMBL gene 3996287 3997183 . + . ID=.8278;gene=xerC;locus_tag=b3811;gene_synonym=ECK3806;gene_synonym=JW3784;db_xref=EcoGene:EG11069 EMBL CDS 3996287 3997183 . + 0 ID=.8279;gene=xerC;locus_tag=b3811;gene_synonym=ECK3806;gene_synonym=JW3784;function=enzyme%3B Cell division;experiment=N-terminus verified by Edman degradation: PMID 2254268;note=site-specific recombinase%2C acts on cer sequence of ColE1%2C effects chromosome segregation at cell division%3B GO_process: GO:0006310 - DNA recombination;codon_start=1;transl_table=11;product=site-specific tyrosine recombinase;protein_id=AAC76814.1;db_xref=GI:1790244;db_xref=ASAP:ABE-0012448;db_xref=UniProtKB/Swiss-Prot:P0A8P6;db_xref=EcoGene:EG11069 EMBL gene 3997183 3997899 . + . ID=.8280;gene=yigB;locus_tag=b3812;gene_synonym=ECK3807;gene_synonym=JW3785;db_xref=EcoGene:EG11202 EMBL CDS 3997183 3997899 . + 0 ID=.8281;gene=yigB;locus_tag=b3812;gene_synonym=ECK3807;gene_synonym=JW3785;ec_number=3.1.3.-;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Riboflavin;note=putative phosphatase;codon_start=1;transl_table=11;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase%3B pyrimidine phosphatase%3B riboflavin synthesis;protein_id=AAC76815.1;db_xref=GI:2367295;db_xref=ASAP:ABE-0012450;db_xref=UniProtKB/Swiss-Prot:P0ADP0;db_xref=EcoGene:EG11202 EMBL gene 3997983 4000145 . + . ID=.8282;gene=uvrD;locus_tag=b3813;gene_synonym=dar-2;gene_synonym=dda;gene_synonym=ECK3808;gene_synonym=JW3786;gene_synonym=mutU;gene_synonym=pdeB;gene_synonym=rad;gene_synonym=recL;gene_synonym=srjC;gene_synonym=uvr502;gene_synonym=uvrE;db_xref=EcoGene:EG11064 EMBL CDS 3997983 4000145 . + 0 ID=.8283;gene=uvrD;locus_tag=b3813;gene_synonym=dar-2;gene_synonym=dda;gene_synonym=ECK3808;gene_synonym=JW3786;gene_synonym=mutU;gene_synonym=pdeB;gene_synonym=rad;gene_synonym=recL;gene_synonym=srjC;gene_synonym=uvr502;gene_synonym=uvrE;ec_number=3.6.1.-;function=enzyme%3B DNA - replication%2C repair%2C restriction/modification;experiment=N-terminus verified by Edman degradation: PMID 2943729;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006261 - DNA-dependent DNA replication%3B GO_process: GO:0006281 - DNA repair%3B GO_process: GO:0009432 - SOS response;codon_start=1;transl_table=11;product=DNA-dependent ATPase I and helicase II;protein_id=AAC76816.1;db_xref=GI:2367296;db_xref=ASAP:ABE-0012455;db_xref=UniProtKB/Swiss-Prot:P03018;db_xref=EcoGene:EG11064 EMBL repeat_region 4000150 4000252 . + . ID=.8284;note=RIP288 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 4000292 4001056 . - . ID=.8285;gene=yigE;locus_tag=b4482;gene_synonym=ECK3809;gene_synonym=JW5591;db_xref=EcoGene:EG11462 EMBL CDS 4000292 4001056 . - 0 ID=.8286;gene=yigE;locus_tag=b4482;gene_synonym=ECK3809;gene_synonym=JW5591;codon_start=1;transl_table=11;product=DUF2233 family protein;protein_id=AAT48219.1;db_xref=GI:48994975;db_xref=ASAP:ABE-0174110;db_xref=UniProtKB/Swiss-Prot:P27840;db_xref=EcoGene:EG11462 EMBL gene 4001426 4002376 . + . ID=.8287;gene=corA;locus_tag=b3816;gene_synonym=ECK3810;gene_synonym=JW3789;db_xref=EcoGene:EG11463 EMBL CDS 4001426 4002376 . + 0 ID=.8288;gene=corA;locus_tag=b3816;gene_synonym=ECK3810;gene_synonym=JW3789;function=transport%3B Transport of small molecules: Cations;note=Mg2+ transport%2C system I%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=magnesium/nickel/cobalt transporter;protein_id=AAC76819.1;db_xref=GI:2367297;db_xref=ASAP:ABE-0012464;db_xref=UniProtKB/Swiss-Prot:P0ABI4;db_xref=EcoGene:EG11463 EMBL gene 4002419 4002799 . - . ID=.8289;gene=yigF;locus_tag=b3817;gene_synonym=ECK3811;gene_synonym=JW3790;db_xref=EcoGene:EG11464 EMBL CDS 4002419 4002799 . - 0 ID=.8290;gene=yigF;locus_tag=b3817;gene_synonym=ECK3811;gene_synonym=JW3790;codon_start=1;transl_table=11;product=DUF2628 family putative inner membrane protein;protein_id=AAC76820.1;db_xref=GI:1790250;db_xref=ASAP:ABE-0012466;db_xref=UniProtKB/Swiss-Prot:P27842;db_xref=EcoGene:EG11464 EMBL gene 4002813 4003193 . - . ID=.8291;gene=yigG;locus_tag=b3818;gene_synonym=ECK3812;gene_synonym=JW5590;db_xref=EcoGene:EG11465 EMBL CDS 4002813 4003193 . - 0 ID=.8292;gene=yigG;locus_tag=b3818;gene_synonym=ECK3812;gene_synonym=JW5590;codon_start=1;transl_table=11;product=PRK11371 family inner membrane protein;protein_id=AAC76821.2;db_xref=GI:87082335;db_xref=ASAP:ABE-0012468;db_xref=UniProtKB/Swiss-Prot:P27843;db_xref=EcoGene:EG11465 EMBL gene 4003288 4004178 . - . ID=.8293;gene=rarD;locus_tag=b3819;gene_synonym=ECK3813;gene_synonym=JW5589;gene_synonym=yigH;db_xref=EcoGene:EG11466 EMBL CDS 4003288 4004178 . - 0 ID=.8294;gene=rarD;locus_tag=b3819;gene_synonym=ECK3813;gene_synonym=JW5589;gene_synonym=yigH;note=GO_process: GO:0042493 - response to drug%3B GO_process: GO:0042892 - chloramphenicol transport;codon_start=1;transl_table=11;product=putative chloramphenical resistance permease;protein_id=AAT48220.1;db_xref=GI:48994976;db_xref=ASAP:ABE-0012472;db_xref=UniProtKB/Swiss-Prot:P27844;db_xref=EcoGene:EG11466 EMBL gene 4004230 4004697 . - . ID=.8295;gene=yigI;locus_tag=b3820;gene_synonym=ECK3814;gene_synonym=JW5588;db_xref=EcoGene:EG11467 EMBL CDS 4004230 4004697 . - 0 ID=.8296;gene=yigI;locus_tag=b3820;gene_synonym=ECK3814;gene_synonym=JW5588;codon_start=1;transl_table=11;product=4HBT thioesterase family protein;protein_id=AAC76823.2;db_xref=GI:87082336;db_xref=ASAP:ABE-0012474;db_xref=UniProtKB/Swiss-Prot:P0ADP2;db_xref=EcoGene:EG11467 EMBL gene 4004862 4005731 . + . ID=.8297;gene=pldA;locus_tag=b3821;gene_synonym=ECK3815;gene_synonym=JW3794;db_xref=EcoGene:EG10738 EMBL CDS 4004862 4005731 . + 0 ID=.8298;gene=pldA;locus_tag=b3821;gene_synonym=ECK3815;gene_synonym=JW3794;ec_number=3.1.1.32;function=enzyme%3B Central intermediary metabolism: Phosphorus compounds;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane%3B GO_process: GO:0006793 - phosphorus metabolic process;codon_start=1;transl_table=11;product=outer membrane phospholipase A;protein_id=AAC76824.1;db_xref=GI:2367300;db_xref=ASAP:ABE-0012479;db_xref=UniProtKB/Swiss-Prot:P0A921;db_xref=EcoGene:EG10738 EMBL gene 4005864 4007693 . + . ID=.8299;gene=recQ;locus_tag=b3822;gene_synonym=ECK3816;gene_synonym=JW5855;db_xref=EcoGene:EG10833 EMBL CDS 4005864 4007693 . + 0 ID=.8300;gene=recQ;locus_tag=b3822;gene_synonym=ECK3816;gene_synonym=JW5855;ec_number=3.6.1.-;function=enzyme%3B DNA - replication%2C repair%2C restriction/modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006261 - DNA-dependent DNA replication%3B GO_process: GO:0006281 - DNA repair%3B GO_process: GO:0006310 - DNA recombination;codon_start=1;transl_table=11;product=ATP-dependent DNA helicase;protein_id=AAT48221.1;db_xref=GI:48994977;db_xref=ASAP:ABE-0012483;db_xref=UniProtKB/Swiss-Prot:P15043;db_xref=EcoGene:EG10833 EMBL gene 4007757 4008377 . + . ID=.8301;gene=rhtC;locus_tag=b3823;gene_synonym=ECK3817;gene_synonym=JW5586;gene_synonym=yigJ;db_xref=EcoGene:EG11468 EMBL CDS 4007757 4008377 . + 0 ID=.8302;gene=rhtC;locus_tag=b3823;gene_synonym=ECK3817;gene_synonym=JW5586;gene_synonym=yigJ;note=amino acid exporter (threonine)%3B threonine efflux protein (RhtB family)%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009088 - threonine biosynthetic process;codon_start=1;transl_table=11;product=threonine efflux pump;protein_id=AAT48222.1;db_xref=GI:48994978;db_xref=ASAP:ABE-0012487;db_xref=UniProtKB/Swiss-Prot:P0AG38;db_xref=EcoGene:EG11468 EMBL repeat_region 4008397 4008430 . + . ID=.8303;note=REP289 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 4008439 4009059 . - . ID=.8304;gene=rhtB;locus_tag=b3824;gene_synonym=ECK3818;gene_synonym=JW5585;gene_synonym=yigK;db_xref=EcoGene:EG11469 EMBL CDS 4008439 4009059 . - 0 ID=.8305;gene=rhtB;locus_tag=b3824;gene_synonym=ECK3818;gene_synonym=JW5585;gene_synonym=yigK;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006564 - L-serine biosynthetic process;codon_start=1;transl_table=11;product=homoserine%2C homoserine lactone and S-methyl-methionine efflux pump;protein_id=AAT48223.1;db_xref=GI:48994979;db_xref=ASAP:ABE-0012490;db_xref=UniProtKB/Swiss-Prot:P0AG34;db_xref=EcoGene:EG11469 EMBL gene 4009170 4010192 . + . ID=.8306;gene=pldB;locus_tag=b3825;gene_synonym=ECK3819;gene_synonym=JW5584;db_xref=EcoGene:EG10739 EMBL CDS 4009170 4010192 . + 0 ID=.8307;gene=pldB;locus_tag=b3825;gene_synonym=ECK3819;gene_synonym=JW5584;ec_number=3.1.1.5;function=enzyme%3B Central intermediary metabolism: Phosphorus compounds;experiment=N-terminus verified by Edman degradation: PMID 3908447;note=GO_process: GO:0006793 - phosphorus metabolic process;codon_start=1;transl_table=11;product=lysophospholipase L2;protein_id=AAT48224.1;db_xref=GI:48994980;db_xref=ASAP:ABE-0012494;db_xref=UniProtKB/Swiss-Prot:P07000;db_xref=EcoGene:EG10739 EMBL gene 4010200 4011000 . + . ID=.8308;gene=yigL;locus_tag=b3826;gene_synonym=ECK3820;gene_synonym=JW5854;db_xref=EcoGene:EG11470 EMBL CDS 4010200 4011000 . + 0 ID=.8309;gene=yigL;locus_tag=b3826;gene_synonym=ECK3820;gene_synonym=JW5854;note=conserved protein%2C phosphatase-like domain;codon_start=1;transl_table=11;product=pyridoxal phosphate phosphatase;protein_id=AAT48225.1;db_xref=GI:48994981;db_xref=ASAP:ABE-0012500;db_xref=UniProtKB/Swiss-Prot:P27848;db_xref=EcoGene:EG11470 EMBL gene 4011076 4011975 . + . ID=.8310;gene=yigM;locus_tag=b3827;gene_synonym=ECK3821;gene_synonym=JW3803;db_xref=EcoGene:EG11471 EMBL CDS 4011076 4011975 . + 0 ID=.8311;gene=yigM;locus_tag=b3827;gene_synonym=ECK3821;gene_synonym=JW3803;codon_start=1;transl_table=11;product=putative inner membrane EamA-like transporter;protein_id=AAC76830.1;db_xref=GI:1790261;db_xref=ASAP:ABE-0012504;db_xref=UniProtKB/Swiss-Prot:P0ADP5;db_xref=EcoGene:EG11471 EMBL gene 4011863 4012816 . - . ID=.8312;gene=metR;locus_tag=b3828;gene_synonym=ECK3822;gene_synonym=JW3804;db_xref=EcoGene:EG10591 EMBL CDS 4011863 4012816 . - 0 ID=.8313;gene=metR;locus_tag=b3828;gene_synonym=ECK3822;gene_synonym=JW3804;function=regulator%3B Amino acid biosynthesis: Methionine;experiment=N-terminus verified by Edman degradation: PMID 2643109;note=regulator for metE and metH%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0009086 - methionine biosynthetic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=methionine biosynthesis regulon transcriptional regulator;protein_id=AAC76831.1;db_xref=GI:1790262;db_xref=ASAP:ABE-0012506;db_xref=UniProtKB/Swiss-Prot:P0A9F9;db_xref=EcoGene:EG10591 EMBL gene 4013053 4015314 . + . ID=.8314;gene=metE;locus_tag=b3829;gene_synonym=ECK3823;gene_synonym=JW3805;gene_synonym=metB12;db_xref=EcoGene:EG10584 EMBL CDS 4013053 4015314 . + 0 ID=.8315;gene=metE;locus_tag=b3829;gene_synonym=ECK3823;gene_synonym=JW3805;gene_synonym=metB12;ec_number=2.1.1.14;function=enzyme%3B Amino acid biosynthesis: Methionine;note=tetrahydropteroyltriglutamate methyltransferase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009086 - methionine biosynthetic process%3B GO_process: GO:0006556 - S-adenosylmethionine biosynthetic process;codon_start=1;transl_table=11;product=5-methyltetrahydropteroyltriglutamate- homocysteine S-methyltransferase;protein_id=AAC76832.1;db_xref=GI:2367304;db_xref=ASAP:ABE-0012520;db_xref=UniProtKB/Swiss-Prot:P25665;db_xref=EcoGene:EG10584 EMBL repeat_region 4015322 4015344 . + . ID=.8316;note=REP290 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 4015354 4016169 . - . ID=.8317;gene=ysgA;locus_tag=b3830;gene_synonym=ECK3824;gene_synonym=JW5853;db_xref=EcoGene:EG14321 EMBL CDS 4015354 4016169 . - 0 ID=.8318;gene=ysgA;locus_tag=b3830;gene_synonym=ECK3824;gene_synonym=JW5853;function=putative enzyme%3B Not classified;note=putative enzyme;codon_start=1;transl_table=11;product=putative carboxymethylenebutenolidase;protein_id=AAT48226.1;db_xref=GI:48994982;db_xref=ASAP:ABE-0012522;db_xref=UniProtKB/Swiss-Prot:P56262;db_xref=EcoGene:EG14321 EMBL gene 4016431 4017192 . + . ID=.8319;gene=udp;locus_tag=b3831;gene_synonym=ECK3825;gene_synonym=JW3808;db_xref=EcoGene:EG11045 EMBL CDS 4016431 4017192 . + 0 ID=.8320;gene=udp;locus_tag=b3831;gene_synonym=ECK3825;gene_synonym=JW3808;ec_number=2.4.2.3;function=enzyme%3B Salvage of nucleosides and nucleotides;note=GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion;codon_start=1;transl_table=11;product=uridine phosphorylase;protein_id=AAC76834.1;db_xref=GI:1790265;db_xref=ASAP:ABE-0012528;db_xref=UniProtKB/Swiss-Prot:P12758;db_xref=EcoGene:EG11045 EMBL gene 4017333 4018760 . + . ID=.8321;gene=rmuC;locus_tag=b3832;gene_synonym=dinK;gene_synonym=ECK3826;gene_synonym=JW3809;gene_synonym=sosB;gene_synonym=yigN;db_xref=EcoGene:EG11472 EMBL CDS 4017333 4018760 . + 0 ID=.8322;gene=rmuC;locus_tag=b3832;gene_synonym=dinK;gene_synonym=ECK3826;gene_synonym=JW3809;gene_synonym=sosB;gene_synonym=yigN;function=phenotype%3B Not classified;note=putative alpha helix chain;codon_start=1;transl_table=11;product=DNA recombination protein;protein_id=AAC76835.1;db_xref=GI:1790266;db_xref=ASAP:ABE-0012531;db_xref=UniProtKB/Swiss-Prot:P0AG71;db_xref=EcoGene:EG11472 EMBL gene 4018855 4019610 . + . ID=.8323;gene=ubiE;locus_tag=b3833;gene_synonym=ECK3827;gene_synonym=JW5581;gene_synonym=menG;gene_synonym=menH;gene_synonym=yigO;db_xref=EcoGene:EG11473 EMBL CDS 4018855 4019610 . + 0 ID=.8324;gene=ubiE;locus_tag=b3833;gene_synonym=ECK3827;gene_synonym=JW5581;gene_synonym=menG;gene_synonym=menH;gene_synonym=yigO;ec_number=2.1.1.-;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Menaquinone%2C ubiquinone;note=2-octaprenyl-6-methoxy-1%2C4-benzoquinone --> 2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinone%3B GO_process: GO:0009060 - aerobic respiration%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=bifunctional 2-octaprenyl-6-methoxy-1%2C4-benzoquinone methylase/ S-adenosylmethionine:2-DMK methyltransferase;protein_id=AAT48227.1;db_xref=GI:48994983;db_xref=ASAP:ABE-0012534;db_xref=UniProtKB/Swiss-Prot:P0A887;db_xref=EcoGene:EG11473 EMBL gene 4019624 4020229 . + . ID=.8325;gene=ubiJ;locus_tag=b3834;gene_synonym=ECK3828;gene_synonym=JW3811;gene_synonym=yigP;db_xref=EcoGene:EG11474 EMBL CDS 4019624 4020229 . + 0 ID=.8326;gene=ubiJ;locus_tag=b3834;gene_synonym=ECK3828;gene_synonym=JW3811;gene_synonym=yigP;function=putative factor%3B Biosynthesis of cofactors%2C carriers:%2C Ubiquinone;codon_start=1;transl_table=11;product=aerobic ubiquinone synthesis protein%2C SCP2 family protein;protein_id=AAC76837.1;db_xref=GI:2367308;db_xref=ASAP:ABE-0012536;db_xref=UniProtKB/Swiss-Prot:P0ADP7;db_xref=EcoGene:EG11474 EMBL gene 4019978 4020229 . + . ID=.8327;gene=esrE;locus_tag=b4707;gene_synonym=ECK4519;db_xref=EcoGene:EG31191 EMBL ncRNA 4019978 4020229 . + . ID=.8328;ncrna_class=other;gene=esrE;locus_tag=b4707;gene_synonym=ECK4519;product=putative sRNA of unknown function;db_xref=EcoGene:EG31191 EMBL gene 4020226 4021866 . + . ID=.8329;gene=ubiB;locus_tag=b3835;gene_synonym=aarF;gene_synonym=ECK3829;gene_synonym=JW3812;gene_synonym=yigQ;gene_synonym=yigR;gene_synonym=yigS;db_xref=EcoGene:EG11476 EMBL CDS 4020226 4021866 . + 0 ID=.8330;gene=ubiB;locus_tag=b3835;gene_synonym=aarF;gene_synonym=ECK3829;gene_synonym=JW3812;gene_synonym=yigQ;gene_synonym=yigR;gene_synonym=yigS;function=putative enzyme%3B Biosynthesis of cofactors%2C carriers: Menaquinone%2C ubiquinone;codon_start=1;transl_table=11;product=regulator of octaprenylphenol hydroxylation%2C ubiquinone synthesis%3B regulator of 2'-N-acetyltransferase%3B putative ABC1 family protein kinase;protein_id=AAC76838.1;db_xref=GI:2367309;db_xref=ASAP:ABE-0012539;db_xref=UniProtKB/Swiss-Prot:P0A6A0;db_xref=EcoGene:EG11476 EMBL gene 4021945 4022214 . + . ID=.8331;gene=tatA;locus_tag=b3836;gene_synonym=ECK3830;gene_synonym=JW3813;gene_synonym=mttA1;gene_synonym=yigT;db_xref=EcoGene:EG11478 EMBL CDS 4021945 4022214 . + 0 ID=.8332;gene=tatA;locus_tag=b3836;gene_synonym=ECK3830;gene_synonym=JW3813;gene_synonym=mttA1;gene_synonym=yigT;codon_start=1;transl_table=11;product=TatABCE protein translocation system subunit;protein_id=AAC76839.2;db_xref=GI:87082337;db_xref=ASAP:ABE-0012541;db_xref=UniProtKB/Swiss-Prot:P69428;db_xref=EcoGene:EG11478 EMBL gene 4022218 4022733 . + . ID=.8333;gene=tatB;locus_tag=b3838;gene_synonym=ECK3831;gene_synonym=JW5580;gene_synonym=mttA2;gene_synonym=ysgB;db_xref=EcoGene:EG14322 EMBL CDS 4022218 4022733 . + 0 ID=.8334;gene=tatB;locus_tag=b3838;gene_synonym=ECK3831;gene_synonym=JW5580;gene_synonym=mttA2;gene_synonym=ysgB;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=TatABCE protein translocation system subunit;protein_id=AAT48228.1;db_xref=GI:48994984;db_xref=ASAP:ABE-0012545;db_xref=UniProtKB/Swiss-Prot:P69425;db_xref=EcoGene:EG14322 EMBL gene 4022736 4023512 . + . ID=.8335;gene=tatC;locus_tag=b3839;gene_synonym=ECK3832;gene_synonym=JW3815;gene_synonym=mttB;gene_synonym=yigU;gene_synonym=yigV;db_xref=EcoGene:EG11479 EMBL CDS 4022736 4023512 . + 0 ID=.8336;gene=tatC;locus_tag=b3839;gene_synonym=ECK3832;gene_synonym=JW3815;gene_synonym=mttB;gene_synonym=yigU;gene_synonym=yigV;codon_start=1;transl_table=11;product=TatABCE protein translocation system subunit;protein_id=AAC76842.1;db_xref=GI:2367313;db_xref=ASAP:ABE-0012547;db_xref=UniProtKB/Swiss-Prot:P69423;db_xref=EcoGene:EG11479 EMBL gene 4023554 4024336 . + . ID=.8337;gene=tatD;locus_tag=b4483;gene_synonym=ECK3833;gene_synonym=JW5931;gene_synonym=mttC;gene_synonym=yigW;gene_synonym=yigX;db_xref=EcoGene:EG11481 EMBL CDS 4023554 4024336 . + 0 ID=.8338;gene=tatD;locus_tag=b4483;gene_synonym=ECK3833;gene_synonym=JW5931;gene_synonym=mttC;gene_synonym=yigW;gene_synonym=yigX;ec_number=3.1.21.-;experiment=N-terminus verified by Edman degradation: PMID 10747959;note=cytoplasmic Dnase%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=quality control of Tat-exported FeS proteins%3B Mg-dependent cytoplasmic DNase;protein_id=AAT48229.1;db_xref=GI:48994985;db_xref=ASAP:ABE-0174116;db_xref=UniProtKB/Swiss-Prot:P27859;db_xref=EcoGene:EG11481 EMBL gene 4024333 4024821 . - . ID=.8339;gene=rfaH;locus_tag=b3842;gene_synonym=ECK3834;gene_synonym=hlyT;gene_synonym=JW3818;gene_synonym=sfrB;db_xref=EcoGene:EG10839 EMBL CDS 4024333 4024821 . - 0 ID=.8340;gene=rfaH;locus_tag=b3842;gene_synonym=ECK3834;gene_synonym=hlyT;gene_synonym=JW3818;gene_synonym=sfrB;function=regulator%3B Macromolecule metabolism: Lipopolysaccharide;note=transcriptional activator affecting biosynthesis of lipopolysaccharide core%2C F pilin%2C and haemolysin%3B GO_component: GO:0009289 - pilus%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_function: GO:0042280 - cell surface antigen activity%2C host-interacting%3B GO_process: GO:0009244 - lipopolysaccharide core region biosynthetic process%3B GO_process: GO:0009297 - pilus assembly%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=transcription antitermination protein;protein_id=AAC76845.1;db_xref=GI:1790276;db_xref=ASAP:ABE-0012553;db_xref=UniProtKB/Swiss-Prot:P0AFW0;db_xref=EcoGene:EG10839 EMBL gene 4024988 4026481 . + . ID=.8341;gene=ubiD;locus_tag=b3843;gene_synonym=ECK3835;gene_synonym=JW3819;gene_synonym=yigC;gene_synonym=yigY;db_xref=EcoGene:EG11396 EMBL CDS 4024988 4026481 . + 0 ID=.8342;gene=ubiD;locus_tag=b3843;gene_synonym=ECK3835;gene_synonym=JW3819;gene_synonym=yigC;gene_synonym=yigY;ec_number=4.1.1.-;codon_start=1;transl_table=11;product=3-octaprenyl-4-hydroxybenzoate decarboxylase;protein_id=AAC76846.1;db_xref=GI:1790277;db_xref=ASAP:ABE-0012557;db_xref=UniProtKB/Swiss-Prot:P0AAB4;db_xref=EcoGene:EG11396 EMBL gene 4026527 4027228 . + . ID=.8343;gene=fre;locus_tag=b3844;gene_synonym=ECK3836;gene_synonym=fadI;gene_synonym=flrD;gene_synonym=fsrC;gene_synonym=hsm-6;gene_synonym=JW3820;db_xref=EcoGene:EG10334 EMBL CDS 4026527 4027228 . + 0 ID=.8344;gene=fre;locus_tag=b3844;gene_synonym=ECK3836;gene_synonym=fadI;gene_synonym=flrD;gene_synonym=fsrC;gene_synonym=hsm-6;gene_synonym=JW3820;ec_number=1.16.1.3;ec_number=1.5.1.41;function=enzyme%3B Energy metabolism%2C carbon: Electron transport;note=ferrisiderophore reductase%3B flavin reductase (NADPH:flavin oxidoreductase)%3B GO_function: GO:0009055 - electron carrier activity;codon_start=1;transl_table=11;product=NAD(P)H-flavin reductase;protein_id=AAC76847.1;db_xref=GI:2367314;db_xref=ASAP:ABE-0012559;db_xref=UniProtKB/Swiss-Prot:P0AEN1;db_xref=EcoGene:EG10334 EMBL repeat_region 4027322 4027602 . + . ID=.8345;note=REP291 (repetitive extragenic palindromic) element%3B contains 6 REP sequences EMBL gene 4027609 4028772 . - . ID=.8346;gene=fadA;locus_tag=b3845;gene_synonym=ECK3837;gene_synonym=JW5578;gene_synonym=oldA;db_xref=EcoGene:EG10278 EMBL CDS 4027609 4028772 . - 0 ID=.8347;gene=fadA;locus_tag=b3845;gene_synonym=ECK3837;gene_synonym=JW5578;gene_synonym=oldA;ec_number=2.3.1.16;function=enzyme%3B Degradation of small molecules: Fatty acids;experiment=N-terminus verified by Edman degradation: PMID 2191949;note=thiolase I%3B 3-ketoacyl-CoA thiolase%3B acetyl-CoA transferase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0019395 - fatty acid oxidation;codon_start=1;transl_table=11;product=3-ketoacyl-CoA thiolase (thiolase I);protein_id=AAT48230.1;db_xref=GI:48994986;db_xref=ASAP:ABE-0012562;db_xref=UniProtKB/Swiss-Prot:P21151;db_xref=EcoGene:EG10278 EMBL gene 4028782 4030971 . - . ID=.8348;gene=fadB;locus_tag=b3846;gene_synonym=ECK3838;gene_synonym=JW3822;gene_synonym=oldB;db_xref=EcoGene:EG10279 EMBL CDS 4028782 4030971 . - 0 ID=.8349;gene=fadB;locus_tag=b3846;gene_synonym=ECK3838;gene_synonym=JW3822;gene_synonym=oldB;ec_number=1.1.1.35;ec_number=4.2.1.17;ec_number=5.1.2.3;ec_number=5.3.3.8;function=enzyme%3B Degradation of small molecules: Fatty acids;experiment=N-terminus verified by Edman degradation: PMID 2191949;note=4-enzyme protein: 3-hydroxyacyl-CoA dehydrogenase%3B 3-hydroxybutyryl-CoA epimerase%3B delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase%3B enoyl-CoA hydratase%3B GO_process: GO:0019395 - fatty acid oxidation;codon_start=1;transl_table=11;product=fused 3-hydroxybutyryl-CoA epimerase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase;protein_id=AAC76849.1;db_xref=GI:1790281;db_xref=ASAP:ABE-0012564;db_xref=UniProtKB/Swiss-Prot:P21177;db_xref=EcoGene:EG10279 EMBL gene 4031161 4032492 . + . ID=.8350;gene=pepQ;locus_tag=b3847;gene_synonym=ECK3839;gene_synonym=JW3823;db_xref=EcoGene:EG10698 EMBL CDS 4031161 4032492 . + 0 ID=.8351;gene=pepQ;locus_tag=b3847;gene_synonym=ECK3839;gene_synonym=JW3823;ec_number=3.4.13.9;function=enzyme%3B Degradation of proteins%2C peptides%2C glyco;codon_start=1;transl_table=11;product=proline dipeptidase;protein_id=AAC76850.1;db_xref=GI:1790282;db_xref=ASAP:ABE-0012569;db_xref=UniProtKB/Swiss-Prot:P21165;db_xref=EcoGene:EG10698 EMBL gene 4032492 4033106 . + . ID=.8352;gene=yigZ;locus_tag=b3848;gene_synonym=ECK3840;gene_synonym=JW5577;db_xref=EcoGene:EG11484 EMBL CDS 4032492 4033106 . + 0 ID=.8353;gene=yigZ;locus_tag=b3848;gene_synonym=ECK3840;gene_synonym=JW5577;note=GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=UPF0029 family protein;protein_id=AAC76851.2;db_xref=GI:87082338;db_xref=ASAP:ABE-0012571;db_xref=UniProtKB/Swiss-Prot:P27862;db_xref=EcoGene:EG11484 EMBL gene 4033145 4034596 . + . ID=.8354;gene=trkH;locus_tag=b3849;gene_synonym=ECK3841;gene_synonym=JW5576;gene_synonym=sapJ;db_xref=EcoGene:EG11021 EMBL CDS 4033145 4034596 . + 0 ID=.8355;gene=trkH;locus_tag=b3849;gene_synonym=ECK3841;gene_synonym=JW5576;gene_synonym=sapJ;function=transport%3B Transport of small molecules: Cations;note=potassium uptake%2C requires TrkE%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=potassium transporter;protein_id=AAT48231.1;db_xref=GI:48994987;db_xref=ASAP:ABE-0012574;db_xref=UniProtKB/Swiss-Prot:P0AFZ7;db_xref=EcoGene:EG11021 EMBL gene 4034608 4035153 . + . ID=.8356;gene=hemG;locus_tag=b3850;gene_synonym=ECK3842;gene_synonym=JW3827;gene_synonym=yihB;db_xref=EcoGene:EG11485 EMBL CDS 4034608 4035153 . + 0 ID=.8357;gene=hemG;locus_tag=b3850;gene_synonym=ECK3842;gene_synonym=JW3827;gene_synonym=yihB;ec_number=1.3.3.4;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Heme%2C porphyrin;experiment=N-terminus verified by Edman degradation: PMID 3611052%2C7916647;note=protoporphyrin oxidase;codon_start=1;transl_table=11;product=protoporphyrin oxidase%2C flavoprotein;protein_id=AAC76853.1;db_xref=GI:1790285;db_xref=ASAP:ABE-0012577;db_xref=UniProtKB/Swiss-Prot:P0ACB4;db_xref=EcoGene:EG11485 EMBL gene 4035531 4037072 . + . ID=.8358;gene=rrsA;locus_tag=b3851;gene_synonym=ECK3843;gene_synonym=JWR0092;db_xref=EcoGene:EG30084 EMBL rRNA 4035531 4037072 . + . ID=.8359;gene=rrsA;locus_tag=b3851;gene_synonym=ECK3843;gene_synonym=JWR0092;product=16S ribosomal RNA of rrnA operon;db_xref=ASAP:ABE-0012579;db_xref=EcoGene:EG30084 EMBL gene 4037141 4037217 . + . ID=.8360;gene=ileT;locus_tag=b3852;gene_synonym=ECK3844;gene_synonym=JWR0093;gene_synonym=tilA;db_xref=EcoGene:EG30043 EMBL tRNA 4037141 4037217 . + . ID=.8361;gene=ileT;locus_tag=b3852;gene_synonym=ECK3844;gene_synonym=JWR0093;gene_synonym=tilA;product=tRNA-Ile;note=anticodon: GAU;db_xref=ASAP:ABE-0012581;db_xref=EcoGene:EG30043 EMBL gene 4037260 4037335 . + . ID=.8362;gene=alaT;locus_tag=b3853;gene_synonym=ECK3845;gene_synonym=JWR0094;gene_synonym=talA;db_xref=EcoGene:EG30008 EMBL tRNA 4037260 4037335 . + . ID=.8363;gene=alaT;locus_tag=b3853;gene_synonym=ECK3845;gene_synonym=JWR0094;gene_synonym=talA;product=tRNA-Ala;note=anticodon: UGC;db_xref=ASAP:ABE-0012584;db_xref=EcoGene:EG30008 EMBL gene 4037519 4040423 . + . ID=.8364;gene=rrlA;locus_tag=b3854;gene_synonym=ECK3846;gene_synonym=JWR0095;db_xref=EcoGene:EG30077 EMBL rRNA 4037519 4040423 . + . ID=.8365;gene=rrlA;locus_tag=b3854;gene_synonym=ECK3846;gene_synonym=JWR0095;product=23S ribosomal RNA of rrnA operon;db_xref=ASAP:ABE-0012586;db_xref=EcoGene:EG30077 EMBL gene 4040517 4040636 . + . ID=.8366;gene=rrfA;locus_tag=b3855;gene_synonym=ECK3847;gene_synonym=JWR0096;db_xref=EcoGene:EG30070 EMBL rRNA 4040517 4040636 . + . ID=.8367;gene=rrfA;locus_tag=b3855;gene_synonym=ECK3847;gene_synonym=JWR0096;product=5S ribosomal RNA of rrnA operon;db_xref=ASAP:ABE-0012588;db_xref=EcoGene:EG30070 EMBL repeat_region 4040864 4040899 . + . ID=.8368;note=REP292 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 4040906 4041433 . - . ID=.8369;gene=mobB;locus_tag=b3856;gene_synonym=ECK3848;gene_synonym=JW5575;gene_synonym=yihC;db_xref=EcoGene:EG11828 EMBL CDS 4040906 4041433 . - 0 ID=.8370;gene=mobB;locus_tag=b3856;gene_synonym=ECK3848;gene_synonym=JW5575;gene_synonym=yihC;function=enzyme%3B Central intermediary metabolism: Nucleotide interconversions;note=GO_process: GO:0006777 - Mo-molybdopterin cofactor biosynthetic process;codon_start=1;transl_table=11;product=molybdopterin-guanine dinucleotide biosynthesis protein B;protein_id=AAC76854.2;db_xref=GI:145693204;db_xref=ASAP:ABE-0012591;db_xref=UniProtKB/Swiss-Prot:P32125;db_xref=EcoGene:EG11828 EMBL gene 4041415 4041999 . - . ID=.8371;gene=mobA;locus_tag=b3857;gene_synonym=chlB;gene_synonym=ECK3849;gene_synonym=JW3829;gene_synonym=mob;gene_synonym=narB;db_xref=EcoGene:EG11829 EMBL CDS 4041415 4041999 . - 0 ID=.8372;gene=mobA;locus_tag=b3857;gene_synonym=chlB;gene_synonym=ECK3849;gene_synonym=JW3829;gene_synonym=mob;gene_synonym=narB;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Molybdopterin;experiment=N-terminus verified by Edman degradation: PMID 8020507;note=molybdopterin ---> molybdopterin-guanine dinucleotide%2C protein Ar%3B GO_process: GO:0006777 - Mo-molybdopterin cofactor biosynthetic process;codon_start=1;transl_table=11;product=molybdopterin-guanine dinucleotide synthase;protein_id=AAC76855.1;db_xref=GI:1790288;db_xref=ASAP:ABE-0012593;db_xref=UniProtKB/Swiss-Prot:P32173;db_xref=EcoGene:EG11829 EMBL gene 4042069 4042338 . + . ID=.8373;gene=yihD;locus_tag=b3858;gene_synonym=ECK3850;gene_synonym=JW3830;db_xref=EcoGene:EG11830 EMBL CDS 4042069 4042338 . + 0 ID=.8374;gene=yihD;locus_tag=b3858;gene_synonym=ECK3850;gene_synonym=JW3830;experiment=N-terminus verified by Edman degradation: PMID 9868784;codon_start=1;transl_table=11;product=DUF1040 protein YihD;protein_id=AAC76856.1;db_xref=GI:1790289;db_xref=ASAP:ABE-0012599;db_xref=UniProtKB/Swiss-Prot:P0ADP9;db_xref=EcoGene:EG11830 EMBL gene 4042415 4043401 . + . ID=.8375;gene=srkA;locus_tag=b3859;gene_synonym=ECK3851;gene_synonym=JW3831;gene_synonym=orfA;gene_synonym=rdoA;gene_synonym=yihE;db_xref=EcoGene:EG11831 EMBL CDS 4042415 4043401 . + 0 ID=.8376;gene=srkA;locus_tag=b3859;gene_synonym=ECK3851;gene_synonym=JW3831;gene_synonym=orfA;gene_synonym=rdoA;gene_synonym=yihE;codon_start=1;transl_table=11;product=Cpx stress response Thr/Ser protein kinase%3B MazF antagonist protein;protein_id=AAC76857.1;db_xref=GI:1790290;db_xref=ASAP:ABE-0012604;db_xref=UniProtKB/Swiss-Prot:P0C0K3;db_xref=EcoGene:EG11831 EMBL gene 4043418 4044044 . + . ID=.8377;gene=dsbA;locus_tag=b3860;gene_synonym=dsf;gene_synonym=ECK3852;gene_synonym=iarA;gene_synonym=JW3832;gene_synonym=ppfA;db_xref=EcoGene:EG11297 EMBL CDS 4043418 4044044 . + 0 ID=.8378;gene=dsbA;locus_tag=b3860;gene_synonym=dsf;gene_synonym=ECK3852;gene_synonym=iarA;gene_synonym=JW3832;gene_synonym=ppfA;ec_number=5.3.4.1;function=enzyme%3B Proteins - translation and modification;note=protein disulfide isomerase I%2C essential for cytochrome c synthesis and formate-dependent reduction%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0006457 - protein folding%3B GO_process: GO:0006950 - response to stress;codon_start=1;transl_table=11;product=periplasmic protein disulfide isomerase I;protein_id=AAC76858.1;db_xref=GI:1790291;db_xref=ASAP:ABE-0012606;db_xref=UniProtKB/Swiss-Prot:P0AEG4;db_xref=EcoGene:EG11297 EMBL gene 4044199 4045629 . + . ID=.8379;gene=yihF;locus_tag=b3861;gene_synonym=ECK3853;gene_synonym=JW5574;db_xref=EcoGene:EG11832 EMBL CDS 4044199 4045629 . + 0 ID=.8380;gene=yihF;locus_tag=b3861;gene_synonym=ECK3853;gene_synonym=JW5574;function=orf%3B Not classified;note=putative GTP-binding protein;codon_start=1;transl_table=11;product=DUF945 family protein;protein_id=AAC76859.2;db_xref=GI:87082339;db_xref=ASAP:ABE-0012609;db_xref=UniProtKB/Swiss-Prot:P32128;db_xref=EcoGene:EG11832 EMBL gene 4045670 4046602 . - . ID=.8381;gene=yihG;locus_tag=b3862;gene_synonym=ECK3854;gene_synonym=JW3834;db_xref=EcoGene:EG11833 EMBL CDS 4045670 4046602 . - 0 ID=.8382;gene=yihG;locus_tag=b3862;gene_synonym=ECK3854;gene_synonym=JW3834;function=putative enzyme%3B Not classified;note=putative endonuclease;codon_start=1;transl_table=11;product=inner membrane protein%2C inner membrane acyltransferase;protein_id=AAC76860.1;db_xref=GI:1790293;db_xref=ASAP:ABE-0012611;db_xref=UniProtKB/Swiss-Prot:P32129;db_xref=EcoGene:EG11833 EMBL gene 4046966 4049752 . + . ID=.8383;gene=polA;locus_tag=b3863;gene_synonym=ECK3855;gene_synonym=JW3835;gene_synonym=resA;db_xref=EcoGene:EG10746 EMBL CDS 4046966 4049752 . + 0 ID=.8384;gene=polA;locus_tag=b3863;gene_synonym=ECK3855;gene_synonym=JW3835;gene_synonym=resA;ec_number=2.7.7.7;function=enzyme%3B DNA - replication%2C repair%2C restriction/modification;note=DNA polymerase I%2C 3' --> 5' polymerase%2C 5' --> 3' and 3' --> 5' exonuclease%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006261 - DNA-dependent DNA replication;codon_start=1;transl_table=11;product=5' to 3' DNA polymerase and 3' to 5'/5' to 3' exonuclease;protein_id=AAC76861.1;db_xref=GI:1790294;db_xref=ASAP:ABE-0012618;db_xref=UniProtKB/Swiss-Prot:P00582;db_xref=EcoGene:EG10746 EMBL gene 4049899 4050007 . + . ID=.8385;gene=spf;locus_tag=b3864;gene_synonym=ECK3856;gene_synonym=IS197;gene_synonym=JWR0097;db_xref=EcoGene:EG30098 EMBL ncRNA 4049899 4050007 . + . ID=.8386;ncrna_class=antisense_RNA;gene=spf;locus_tag=b3864;gene_synonym=ECK3856;gene_synonym=IS197;gene_synonym=JWR0097;product=Spot 42 sRNA antisense regulator of galK translation%2C Hfq-dependent;function=7.1 location of gene products%3B cytoplasm;function=antisense regulator of galK translation;function=RNA%3B Global regulatory functions;db_xref=ASAP:ABE-0012621;db_xref=EcoGene:EG30098 EMBL repeat_region 4050033 4050111 . + . ID=.8387;note=RIP293 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 4050133 4050765 . - . ID=.8388;gene=yihA;locus_tag=b3865;gene_synonym=ECK3857;gene_synonym=engB;gene_synonym=JW5930;db_xref=EcoGene:EG11203 EMBL CDS 4050133 4050765 . - 0 ID=.8389;gene=yihA;locus_tag=b3865;gene_synonym=ECK3857;gene_synonym=engB;gene_synonym=JW5930;note=GTPase essential for cell cycle%3B GO_process: GO:0007049 - cell cycle;codon_start=1;transl_table=11;product=cell division GTP-binding protein;protein_id=AAC76862.3;db_xref=GI:145693205;db_xref=ASAP:ABE-0012623;db_xref=UniProtKB/Swiss-Prot:P0A6P7;db_xref=EcoGene:EG11203 EMBL gene 4051036 4051280 . + . ID=.8390;gene=csrC;locus_tag=b4457;gene_synonym=ECK3858;gene_synonym=IS198;gene_synonym=JWR0214;gene_synonym=psrA21;gene_synonym=ryiB;gene_synonym=sraK;gene_synonym=tpk2;db_xref=EcoGene:EG31134 EMBL ncRNA 4051036 4051280 . + . ID=.8391;ncrna_class=other;gene=csrC;locus_tag=b4457;gene_synonym=ECK3858;gene_synonym=IS198;gene_synonym=JWR0214;gene_synonym=psrA21;gene_synonym=ryiB;gene_synonym=sraK;gene_synonym=tpk2;product=CsrC sRNA sequesters CsrA%2C a carbon flux regulator;note=CsrC regulatory RNA%3B binds global regulatory protein CsrA%2C antagonizing CsrA regulation;db_xref=ASAP:ABE-0047275;db_xref=EcoGene:EG31134 EMBL gene 4051347 4051856 . + . ID=.8392;gene=yihI;locus_tag=b3866;gene_synonym=ECK3859;gene_synonym=JW3837;db_xref=EcoGene:EG11835 EMBL CDS 4051347 4051856 . + 0 ID=.8393;gene=yihI;locus_tag=b3866;gene_synonym=ECK3859;gene_synonym=JW3837;codon_start=1;transl_table=11;product=activator of Der GTPase;protein_id=AAC76863.1;db_xref=GI:1790297;db_xref=ASAP:ABE-0012626;db_xref=UniProtKB/Swiss-Prot:P0A8H6;db_xref=EcoGene:EG11835 EMBL gene 4052045 4053418 . + . ID=.8394;gene=hemN;locus_tag=b3867;gene_synonym=ECK3860;gene_synonym=JW3838;gene_synonym=yihJ;db_xref=EcoGene:EG11836 EMBL CDS 4052045 4053418 . + 0 ID=.8395;gene=hemN;locus_tag=b3867;gene_synonym=ECK3860;gene_synonym=JW3838;gene_synonym=yihJ;ec_number=1.3.99.22;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Heme%2C porphyrin;note=O2-independent coproporphyrinogen III oxidase;codon_start=1;transl_table=11;product=coproporphyrinogen III oxidase%2C SAM and NAD(P)H dependent%2C oxygen-independent;protein_id=AAC76864.2;db_xref=GI:87082341;db_xref=ASAP:ABE-0012629;db_xref=UniProtKB/Swiss-Prot:P32131;db_xref=EcoGene:EG11836 EMBL repeat_region 4053530 4053613 . + . ID=.8396;note=REP294 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 4053647 4053757 . - . ID=.8397;gene=yshB;locus_tag=b4686;gene_synonym=ECK4501;db_xref=EcoGene:EG14491 EMBL CDS 4053647 4053757 . - 0 ID=.8398;gene=yshB;locus_tag=b4686;gene_synonym=ECK4501;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=ACO60012.1;db_xref=GI:226510988;db_xref=UniProtKB/Swiss-Prot:C1P620;db_xref=EcoGene:EG14491 EMBL gene 4053869 4055278 . - . ID=.8399;gene=glnG;locus_tag=b3868;gene_synonym=ECK3861;gene_synonym=glnT;gene_synonym=JW3839;gene_synonym=ntrC;db_xref=EcoGene:EG10385 EMBL CDS 4053869 4055278 . - 0 ID=.8400;gene=glnG;locus_tag=b3868;gene_synonym=ECK3861;gene_synonym=glnT;gene_synonym=JW3839;gene_synonym=ntrC;function=regulator%3B Amino acid biosynthesis: Glutamine;note=response regulator for gln (sensor glnL) (nitrogen regulator I%2C NRI)%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006542 - glutamine biosynthetic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein;protein_id=AAC76865.1;db_xref=GI:1790299;db_xref=ASAP:ABE-0012632;db_xref=UniProtKB/Swiss-Prot:P0AFB8;db_xref=EcoGene:EG10385 EMBL gene 4055290 4056339 . - . ID=.8401;gene=glnL;locus_tag=b3869;gene_synonym=ECK3862;gene_synonym=glnR;gene_synonym=JW3840;gene_synonym=ntrB;db_xref=EcoGene:EG10387 EMBL CDS 4055290 4056339 . - 0 ID=.8402;gene=glnL;locus_tag=b3869;gene_synonym=ECK3862;gene_synonym=glnR;gene_synonym=JW3840;gene_synonym=ntrB;function=enzyme%3B Amino acid biosynthesis: Glutamine;note=histidine protein kinase sensor for GlnG regulator (nitrogen regulator II%2C NRII)%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006542 - glutamine biosynthetic process%3B GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=sensory histidine kinase in two-component regulatory system with GlnG;protein_id=AAC76866.1;db_xref=GI:1790300;db_xref=ASAP:ABE-0012634;db_xref=UniProtKB/Swiss-Prot:P0AFB5;db_xref=EcoGene:EG10387 EMBL repeat_region 4056471 4056555 . + . ID=.8403;note=REP295 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 4056625 4058034 . - . ID=.8404;gene=glnA;locus_tag=b3870;gene_synonym=ECK3863;gene_synonym=JW3841;db_xref=EcoGene:EG10383 EMBL CDS 4056625 4058034 . - 0 ID=.8405;gene=glnA;locus_tag=b3870;gene_synonym=ECK3863;gene_synonym=JW3841;ec_number=6.3.1.2;function=enzyme%3B Amino acid biosynthesis: Glutamine;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006542 - glutamine biosynthetic process%3B GO_process: GO:0006807 - nitrogen compound metabolic process;codon_start=1;transl_table=11;product=glutamine synthetase;protein_id=AAC76867.1;db_xref=GI:1790301;db_xref=ASAP:ABE-0012640;db_xref=UniProtKB/Swiss-Prot:P0A9C5;db_xref=EcoGene:EG10383 EMBL gene 4058407 4060230 . + . ID=.8406;gene=typA;locus_tag=b3871;gene_synonym=bipA;gene_synonym=ECK3864;gene_synonym=JW5571;gene_synonym=yihK;db_xref=EcoGene:EG11837 EMBL CDS 4058407 4060230 . + 0 ID=.8407;gene=typA;locus_tag=b3871;gene_synonym=bipA;gene_synonym=ECK3864;gene_synonym=JW5571;gene_synonym=yihK;function=putative factor%3B Not classified;experiment=N-terminus verified by Edman degradation: PMID 7783627%2C9298646;codon_start=1;transl_table=11;product=GTP-binding protein;protein_id=AAT48232.1;db_xref=GI:48994988;db_xref=ASAP:ABE-0012648;db_xref=UniProtKB/Swiss-Prot:P32132;db_xref=EcoGene:EG11837 EMBL gene 4060447 4061157 . + . ID=.8408;gene=yihL;locus_tag=b3872;gene_synonym=ECK3865;gene_synonym=JW3843;db_xref=EcoGene:EG11838 EMBL CDS 4060447 4061157 . + 0 ID=.8409;gene=yihL;locus_tag=b3872;gene_synonym=ECK3865;gene_synonym=JW3843;function=putative regulator%3B Not classified;note=putative transcriptional regulator%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=putative DNA-binding transcriptional regulator;protein_id=AAC76869.1;db_xref=GI:1790304;db_xref=ASAP:ABE-0012651;db_xref=UniProtKB/Swiss-Prot:P0ACM9;db_xref=EcoGene:EG11838 EMBL gene 4061165 4062145 . + . ID=.8410;gene=yihM;locus_tag=b3873;gene_synonym=ECK3866;gene_synonym=JW3844;db_xref=EcoGene:EG11839 EMBL CDS 4061165 4062145 . + 0 ID=.8411;gene=yihM;locus_tag=b3873;gene_synonym=ECK3866;gene_synonym=JW3844;codon_start=1;transl_table=11;product=putative sugar phosphate isomerase;protein_id=AAC76870.1;db_xref=GI:1790305;db_xref=ASAP:ABE-0012653;db_xref=UniProtKB/Swiss-Prot:P32134;db_xref=EcoGene:EG11839 EMBL gene 4062247 4063512 . + . ID=.8412;gene=yihN;locus_tag=b3874;gene_synonym=ECK3867;gene_synonym=JW3845;db_xref=EcoGene:EG11840 EMBL CDS 4062247 4063512 . + 0 ID=.8413;gene=yihN;locus_tag=b3874;gene_synonym=ECK3867;gene_synonym=JW3845;function=putative transport%3B Drug/analog sensitivity;note=putative resistance protein (transport)%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=MFS transporter family protein;protein_id=AAC76871.1;db_xref=GI:1790306;db_xref=ASAP:ABE-0012656;db_xref=UniProtKB/Swiss-Prot:P32135;db_xref=EcoGene:EG11840 EMBL repeat_region 4063519 4063593 . + . ID=.8414;note=REP296 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 4063603 4064295 . - . ID=.8415;gene=ompL;locus_tag=b3875;gene_synonym=ECK3868;gene_synonym=JW3846;gene_synonym=yshA;db_xref=EcoGene:EG13374 EMBL CDS 4063603 4064295 . - 0 ID=.8416;gene=ompL;locus_tag=b3875;gene_synonym=ECK3868;gene_synonym=JW3846;gene_synonym=yshA;codon_start=1;transl_table=11;product=outer membrane porin L%3B putative sulpholipid porin;protein_id=AAC76872.1;db_xref=GI:1790307;db_xref=ASAP:ABE-0012659;db_xref=UniProtKB/Swiss-Prot:P76773;db_xref=EcoGene:EG13374 EMBL gene 4064363 4065766 . - . ID=.8417;gene=yihO;locus_tag=b3876;gene_synonym=ECK3869;gene_synonym=JW5852;gene_synonym=squO;db_xref=EcoGene:EG11841 EMBL CDS 4064363 4065766 . - 0 ID=.8418;gene=yihO;locus_tag=b3876;gene_synonym=ECK3869;gene_synonym=JW5852;gene_synonym=squO;function=putative transport%3B Not classified;note=putative permease%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative sulphoquinovose importer;protein_id=AAT48233.1;db_xref=GI:48994989;db_xref=ASAP:ABE-0012661;db_xref=UniProtKB/Swiss-Prot:P32136;db_xref=EcoGene:EG11841 EMBL gene 4065809 4067194 . - . ID=.8419;gene=yihP;locus_tag=b3877;gene_synonym=ECK3870;gene_synonym=JW3848;gene_synonym=squP;db_xref=EcoGene:EG11842 EMBL CDS 4065809 4067194 . - 0 ID=.8420;gene=yihP;locus_tag=b3877;gene_synonym=ECK3870;gene_synonym=JW3848;gene_synonym=squP;function=putative transport%3B Not classified;note=putative permease%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative 2%2C3-dihydroxypropane-1-sulphonate exporter%2C membrane protein;protein_id=AAC76874.2;db_xref=GI:145693206;db_xref=ASAP:ABE-0012664;db_xref=UniProtKB/Swiss-Prot:P32137;db_xref=EcoGene:EG11842 EMBL gene 4067240 4069276 . - . ID=.8421;gene=yihQ;locus_tag=b3878;gene_synonym=ECK3871;gene_synonym=JW3849;gene_synonym=squQ;db_xref=EcoGene:EG11843 EMBL CDS 4067240 4069276 . - 0 ID=.8422;gene=yihQ;locus_tag=b3878;gene_synonym=ECK3871;gene_synonym=JW3849;gene_synonym=squQ;function=enzyme%3B Not classified;note=putative glycosidase;codon_start=1;transl_table=11;product=putative sulpholipid alpha-glucosidase%3B alpha-glucosyl fluoride glucosidase;protein_id=AAC76875.1;db_xref=GI:2367323;db_xref=ASAP:ABE-0012666;db_xref=UniProtKB/Swiss-Prot:P32138;db_xref=EcoGene:EG11843 EMBL gene 4069475 4070401 . - . ID=.8423;gene=yihR;locus_tag=b3879;gene_synonym=ECK3872;gene_synonym=JW3850;gene_synonym=squR;db_xref=EcoGene:EG11844 EMBL CDS 4069475 4070401 . - 0 ID=.8424;gene=yihR;locus_tag=b3879;gene_synonym=ECK3872;gene_synonym=JW3850;gene_synonym=squR;function=enzyme%3B Not classified;note=putative aldose-1-epimerase;codon_start=1;transl_table=11;product=putative sulphoquinovose mutarotase;protein_id=AAC76876.1;db_xref=GI:1790311;db_xref=ASAP:ABE-0012669;db_xref=UniProtKB/Swiss-Prot:P32139;db_xref=EcoGene:EG11844 EMBL gene 4070515 4071756 . - . ID=.8425;gene=yihS;locus_tag=b3880;gene_synonym=ECK3873;gene_synonym=JW5569;gene_synonym=manC?;gene_synonym=squS;db_xref=EcoGene:EG11845 EMBL CDS 4070515 4071756 . - 0 ID=.8426;gene=yihS;locus_tag=b3880;gene_synonym=ECK3873;gene_synonym=JW5569;gene_synonym=manC?;gene_synonym=squS;function=enzyme%3B Not classified;codon_start=1;transl_table=11;product=sulphoquinovose isomerase;protein_id=AAD13442.2;db_xref=GI:87082342;db_xref=ASAP:ABE-0012673;db_xref=UniProtKB/Swiss-Prot:P32140;db_xref=EcoGene:EG11845 EMBL gene 4071773 4072651 . - . ID=.8427;gene=yihT;locus_tag=b3881;gene_synonym=ECK3874;gene_synonym=JW3852;gene_synonym=squT;db_xref=EcoGene:EG11846 EMBL CDS 4071773 4072651 . - 0 ID=.8428;gene=yihT;locus_tag=b3881;gene_synonym=ECK3874;gene_synonym=JW3852;gene_synonym=squT;function=enzyme%3B Not classified;note=putative aldolase;codon_start=1;transl_table=11;product=6-deoxy-6-sulphofructose-1-phosphate aldolase;protein_id=AAD13443.1;db_xref=GI:1790314;db_xref=ASAP:ABE-0012675;db_xref=UniProtKB/Swiss-Prot:P32141;db_xref=EcoGene:EG11846 EMBL gene 4072675 4073571 . - . ID=.8429;gene=yihU;locus_tag=b3882;gene_synonym=ECK3875;gene_synonym=JW3853;gene_synonym=squU;db_xref=EcoGene:EG11847 EMBL CDS 4072675 4073571 . - 0 ID=.8430;gene=yihU;locus_tag=b3882;gene_synonym=ECK3875;gene_synonym=JW3853;gene_synonym=squU;function=enzyme%3B Not classified;note=putative dehydrogenase;codon_start=1;transl_table=11;product=3-sulpholactaldehyde (SLA) reductase%2C NADH-dependent%3B gamma-hydroxybutyrate dehydrogenase%2C NADH-dependent;protein_id=AAD13444.1;db_xref=GI:1790315;db_xref=ASAP:ABE-0012678;db_xref=UniProtKB/Swiss-Prot:P0A9V8;db_xref=EcoGene:EG11847 EMBL gene 4073739 4074635 . + . ID=.8431;gene=yihV;locus_tag=b3883;gene_synonym=ECK3876;gene_synonym=JW5568;gene_synonym=squV;db_xref=EcoGene:EG11848 EMBL CDS 4073739 4074635 . + 0 ID=.8432;gene=yihV;locus_tag=b3883;gene_synonym=ECK3876;gene_synonym=JW5568;gene_synonym=squV;function=enzyme%3B Not classified;note=putative kinase;codon_start=1;transl_table=11;product=6-deoxy-6-sulphofructose kinase;protein_id=AAD13445.2;db_xref=GI:87082343;db_xref=ASAP:ABE-0012681;db_xref=UniProtKB/Swiss-Prot:P32143;db_xref=EcoGene:EG11848 EMBL gene 4074669 4075454 . + . ID=.8433;gene=yihW;locus_tag=b3884;gene_synonym=ECK3877;gene_synonym=JW5567;gene_synonym=squW;db_xref=EcoGene:EG11849 EMBL CDS 4074669 4075454 . + 0 ID=.8434;gene=yihW;locus_tag=b3884;gene_synonym=ECK3877;gene_synonym=JW5567;gene_synonym=squW;function=putative enzyme%3B Not classified;note=putative DEOR-type transcriptional regulator%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=putative transcriptional regulator for sulphoquinovose utilization;protein_id=AAD13446.2;db_xref=GI:87082344;db_xref=ASAP:ABE-0012683;db_xref=UniProtKB/Swiss-Prot:P32144;db_xref=EcoGene:EG11849 EMBL gene 4075553 4076152 . + . ID=.8435;gene=yihX;locus_tag=b3885;gene_synonym=ECK3878;gene_synonym=JW5566;db_xref=EcoGene:EG11850 EMBL CDS 4075553 4076152 . + 0 ID=.8436;gene=yihX;locus_tag=b3885;gene_synonym=ECK3878;gene_synonym=JW5566;function=enzyme%3B Not classified;note=putative phosphatase;codon_start=1;transl_table=11;product=alpha-D-glucose-1-phosphate phosphatase%2C anomer-specific;protein_id=AAD13447.2;db_xref=GI:87082345;db_xref=ASAP:ABE-0012686;db_xref=UniProtKB/Swiss-Prot:P0A8Y3;db_xref=EcoGene:EG11850 EMBL gene 4076146 4077018 . + . ID=.8437;gene=yihY;locus_tag=b3886;gene_synonym=ECK3879;gene_synonym=JW3857;gene_synonym=rbn;db_xref=EcoGene:EG11851 EMBL CDS 4076146 4077018 . + 0 ID=.8438;gene=yihY;locus_tag=b3886;gene_synonym=ECK3879;gene_synonym=JW3857;gene_synonym=rbn;note=tRNA processing exoribonuclease BN%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=BrkB family putative transporter%2C inner membrane protein;protein_id=AAD13448.1;db_xref=GI:1790319;db_xref=ASAP:ABE-0012688;db_xref=UniProtKB/Swiss-Prot:P0A8K8;db_xref=EcoGene:EG11851 EMBL gene 4077015 4077452 . + . ID=.8439;gene=dtd;locus_tag=b3887;gene_synonym=ECK3880;gene_synonym=JW3858;gene_synonym=yihZ;db_xref=EcoGene:EG11852 EMBL CDS 4077015 4077452 . + 0 ID=.8440;gene=dtd;locus_tag=b3887;gene_synonym=ECK3880;gene_synonym=JW3858;gene_synonym=yihZ;ec_number=3.1.-.-;experiment=N-terminus verified by Edman degradation: PMID 10383414;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009451 - RNA modification%3B GO_process: GO:0006805 - xenobiotic metabolic process;codon_start=1;transl_table=11;product=D-tyr-tRNA(Tyr) deacylase;protein_id=AAD13449.1;db_xref=GI:1790320;db_xref=ASAP:ABE-0012690;db_xref=UniProtKB/Swiss-Prot:P0A6M4;db_xref=EcoGene:EG11852 EMBL gene 4077449 4078438 . + . ID=.8441;gene=yiiD;locus_tag=b3888;gene_synonym=ECK3881;gene_synonym=JW3859;db_xref=EcoGene:EG11853 EMBL CDS 4077449 4078438 . + 0 ID=.8442;gene=yiiD;locus_tag=b3888;gene_synonym=ECK3881;gene_synonym=JW3859;function=putative enzyme%3B Not classified;note=putative acetyltransferase;codon_start=1;transl_table=11;product=GNAT family putative N-acetyltransferase;protein_id=AAD13450.1;db_xref=GI:1790321;db_xref=ASAP:ABE-0012692;db_xref=UniProtKB/Swiss-Prot:P0ADQ2;db_xref=EcoGene:EG11853 EMBL gene 4079297 4079509 . + . ID=.8443;gene=yiiE;locus_tag=b3889;gene_synonym=ECK3882;gene_synonym=JW5929;db_xref=EcoGene:EG11854 EMBL CDS 4079297 4079509 . + 0 ID=.8444;gene=yiiE;locus_tag=b3889;gene_synonym=ECK3882;gene_synonym=JW5929;codon_start=1;transl_table=11;product=CopG family putative transcriptional regulator;protein_id=AAD13451.3;db_xref=GI:145693207;db_xref=ASAP:ABE-0012696;db_xref=UniProtKB/Swiss-Prot:P0ADQ5;db_xref=EcoGene:EG11854 EMBL gene 4079751 4079969 . + . ID=.8445;gene=yiiF;locus_tag=b3890;gene_synonym=ECK3883;gene_synonym=JW5563;db_xref=EcoGene:EG11855 EMBL CDS 4079751 4079969 . + 0 ID=.8446;gene=yiiF;locus_tag=b3890;gene_synonym=ECK3883;gene_synonym=JW5563;codon_start=1;transl_table=11;product=putative thymol sensitivity protein%2C CopG family putative transcriptional regulator;protein_id=AAD13452.2;db_xref=GI:87082347;db_xref=ASAP:ABE-0012700;db_xref=UniProtKB/Swiss-Prot:P0AFU6;db_xref=EcoGene:EG11855 EMBL repeat_region 4080020 4080117 . + . ID=.8447;note=REP297 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 4080299 4081228 . - . ID=.8448;gene=fdhE;locus_tag=b3891;gene_synonym=ECK3884;gene_synonym=JW3862;db_xref=EcoGene:EG10284 EMBL CDS 4080299 4081228 . - 0 ID=.8449;gene=fdhE;locus_tag=b3891;gene_synonym=ECK3884;gene_synonym=JW3862;function=phenotype%3B Energy metabolism%2C carbon: Anaerobic respiration;note=affects formate dehydrogenase-N%3B GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=formate dehydrogenase formation protein;protein_id=AAD13453.1;db_xref=GI:1790324;db_xref=ASAP:ABE-0012703;db_xref=UniProtKB/Swiss-Prot:P13024;db_xref=EcoGene:EG10284 EMBL gene 4081225 4081860 . - . ID=.8450;gene=fdoI;locus_tag=b3892;gene_synonym=ECK3885;gene_synonym=JW3863;db_xref=EcoGene:EG11856 EMBL CDS 4081225 4081860 . - 0 ID=.8451;gene=fdoI;locus_tag=b3892;gene_synonym=ECK3885;gene_synonym=JW3863;function=enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;note=formate dehydrogenase%2C cytochrome B556 (FDO) subunit%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0017004 - cytochrome complex assembly;codon_start=1;transl_table=11;product=formate dehydrogenase-O%2C cytochrome b556 subunit;protein_id=AAD13454.1;db_xref=GI:1790325;db_xref=ASAP:ABE-0012705;db_xref=UniProtKB/Swiss-Prot:P0AEL0;db_xref=EcoGene:EG11856 EMBL gene 4081857 4082759 . - . ID=.8452;gene=fdoH;locus_tag=b3893;gene_synonym=ECK3886;gene_synonym=JW3864;db_xref=EcoGene:EG11857 EMBL CDS 4081857 4082759 . - 0 ID=.8453;gene=fdoH;locus_tag=b3893;gene_synonym=ECK3886;gene_synonym=JW3864;function=enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;note=formate dehydrogenase-O%2C iron-sulfur subunit%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=formate dehydrogenase-O%2C Fe-S subunit;protein_id=AAD13455.1;db_xref=GI:1790326;db_xref=ASAP:ABE-0012708;db_xref=UniProtKB/Swiss-Prot:P0AAJ5;db_xref=EcoGene:EG11857 EMBL gene 4082772 4085822 . - . ID=.8454;gene=fdoG;locus_tag=b3894;gene_synonym=ECK3887;gene_synonym=JW3865;db_xref=EcoGene:EG11858 EMBL CDS 4082772 4085822 . - 0 ID=.8455;gene=fdoG;locus_tag=b3894;gene_synonym=ECK3887;gene_synonym=JW3865;ec_number=1.2.1.2;function=enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;note=formate dehydrogenase-O%2C major subunit%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_except=(pos:complement(4085235..4085237)%2Caa:Sec);transl_table=11;product=formate dehydrogenase-O%2C large subunit;protein_id=AAD13456.1;db_xref=GI:3868720;db_xref=ASAP:ABE-0012710;db_xref=UniProtKB/Swiss-Prot:P32176;db_xref=EcoGene:EG11858 EMBL gene 4086016 4086849 . + . ID=.8456;gene=fdhD;locus_tag=b3895;gene_synonym=ECK3888;gene_synonym=JW3866;db_xref=EcoGene:EG11859 EMBL CDS 4086016 4086849 . + 0 ID=.8457;gene=fdhD;locus_tag=b3895;gene_synonym=ECK3888;gene_synonym=JW3866;function=phenotype%3B Energy metabolism%2C carbon: Anaerobic respiration;note=affects formate dehydrogenase-N%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=formate dehydrogenase formation protein;protein_id=AAC76877.1;db_xref=GI:1790329;db_xref=ASAP:ABE-0012714;db_xref=UniProtKB/Swiss-Prot:P32177;db_xref=EcoGene:EG11859 EMBL gene 4087002 4088057 . + . ID=.8458;gene=yiiG;locus_tag=b3896;gene_synonym=ECK3889;gene_synonym=JW3867;db_xref=EcoGene:EG11860 EMBL CDS 4087002 4088057 . + 0 ID=.8459;gene=yiiG;locus_tag=b3896;gene_synonym=ECK3889;gene_synonym=JW3867;codon_start=1;transl_table=11;product=DUF3829 family lipoprotein;protein_id=AAC76878.1;db_xref=GI:1790330;db_xref=ASAP:ABE-0012718;db_xref=UniProtKB/Swiss-Prot:P32151;db_xref=EcoGene:EG11860 EMBL repeat_region 4088081 4088101 . + . ID=.8460;note=REP298 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 4088107 4089855 . - . ID=.8461;gene=frvR;locus_tag=b3897;gene_synonym=ECK3890;gene_synonym=JW3868;gene_synonym=yiiH;db_xref=EcoGene:EG11861 EMBL CDS 4088107 4089855 . - 0 ID=.8462;gene=frvR;locus_tag=b3897;gene_synonym=ECK3890;gene_synonym=JW3868;gene_synonym=yiiH;function=putative regulator%3B Not classified;note=putative frv operon regulatory protein%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=putative frv operon regulator%3B contains a PTS EIIA domain;protein_id=AAC76879.1;db_xref=GI:1790331;db_xref=ASAP:ABE-0012720;db_xref=UniProtKB/Swiss-Prot:P32152;db_xref=EcoGene:EG11861 EMBL gene 4089855 4090925 . - . ID=.8463;gene=frvX;locus_tag=b3898;gene_synonym=ECK3891;gene_synonym=JW3869;gene_synonym=yiiI;db_xref=EcoGene:EG11862 EMBL CDS 4089855 4090925 . - 0 ID=.8464;gene=frvX;locus_tag=b3898;gene_synonym=ECK3891;gene_synonym=JW3869;gene_synonym=yiiI;function=orf%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=frv operon protein%3B GO_process: GO:0000272 - polysaccharide catabolic process;codon_start=1;transl_table=11;product=putative peptidase;protein_id=AAC76880.1;db_xref=GI:1790332;db_xref=ASAP:ABE-0012722;db_xref=UniProtKB/Swiss-Prot:P32153;db_xref=EcoGene:EG11862 EMBL gene 4090915 4092366 . - . ID=.8465;gene=frvB;locus_tag=b3899;gene_synonym=ECK3892;gene_synonym=JW5562;gene_synonym=yiiJ;db_xref=EcoGene:EG11863 EMBL CDS 4090915 4092366 . - 0 ID=.8466;gene=frvB;locus_tag=b3899;gene_synonym=ECK3892;gene_synonym=JW5562;gene_synonym=yiiJ;ec_number=2.7.1.69;function=enzyme%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=PTS system%2C fructose-like enzyme IIBC component;codon_start=1;transl_table=11;product=putative PTS enzyme%2C IIB component/IIC component;protein_id=AAC76881.2;db_xref=GI:87082348;db_xref=ASAP:ABE-0012725;db_xref=UniProtKB/Swiss-Prot:P32154;db_xref=EcoGene:EG11863 EMBL gene 4092377 4092823 . - . ID=.8467;gene=frvA;locus_tag=b3900;gene_synonym=ECK3893;gene_synonym=JW3871;gene_synonym=yiiK;db_xref=EcoGene:EG11864 EMBL CDS 4092377 4092823 . - 0 ID=.8468;gene=frvA;locus_tag=b3900;gene_synonym=ECK3893;gene_synonym=JW3871;gene_synonym=yiiK;ec_number=2.7.1.69;function=enzyme%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=PTS system%2C fructose-specific IIA component%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=putative enzyme IIA component of PTS;protein_id=AAC76882.1;db_xref=GI:2367327;db_xref=ASAP:ABE-0012727;db_xref=UniProtKB/Swiss-Prot:P32155;db_xref=EcoGene:EG11864 EMBL gene 4093124 4093438 . - . ID=.8469;gene=rhaM;locus_tag=b3901;gene_synonym=ECK3894;gene_synonym=JW3872;gene_synonym=yiiL;db_xref=EcoGene:EG11865 EMBL CDS 4093124 4093438 . - 0 ID=.8470;gene=rhaM;locus_tag=b3901;gene_synonym=ECK3894;gene_synonym=JW3872;gene_synonym=yiiL;codon_start=1;transl_table=11;product=L-rhamnose mutarotase;protein_id=AAC76883.1;db_xref=GI:1790335;db_xref=ASAP:ABE-0012729;db_xref=UniProtKB/Swiss-Prot:P32156;db_xref=EcoGene:EG11865 EMBL gene 4093448 4094272 . - . ID=.8471;gene=rhaD;locus_tag=b3902;gene_synonym=ECK3895;gene_synonym=JW3873;db_xref=EcoGene:EG11866 EMBL CDS 4093448 4094272 . - 0 ID=.8472;gene=rhaD;locus_tag=b3902;gene_synonym=ECK3895;gene_synonym=JW3873;ec_number=4.1.2.19;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=rhamnulose-phosphate aldolase%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=rhamnulose-1-phosphate aldolase;protein_id=AAC76884.1;db_xref=GI:1790336;db_xref=ASAP:ABE-0012731;db_xref=UniProtKB/Swiss-Prot:P32169;db_xref=EcoGene:EG11866 EMBL repeat_region 4094316 4094717 . + . ID=.8473;note=REP299 (repetitive extragenic palindromic) element%3B contains 9 REP sequences EMBL gene 4094723 4095982 . - . ID=.8474;gene=rhaA;locus_tag=b3903;gene_synonym=ECK3896;gene_synonym=JW5561;db_xref=EcoGene:EG11867 EMBL CDS 4094723 4095982 . - 0 ID=.8475;gene=rhaA;locus_tag=b3903;gene_synonym=ECK3896;gene_synonym=JW5561;ec_number=5.3.1.14;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=L-rhamnose isomerase;protein_id=AAT48234.1;db_xref=GI:48994990;db_xref=ASAP:ABE-0012736;db_xref=UniProtKB/Swiss-Prot:P32170;db_xref=EcoGene:EG11867 EMBL gene 4095979 4097448 . - . ID=.8476;gene=rhaB;locus_tag=b3904;gene_synonym=ECK3897;gene_synonym=JW3875;db_xref=EcoGene:EG11868 EMBL CDS 4095979 4097448 . - 0 ID=.8477;gene=rhaB;locus_tag=b3904;gene_synonym=ECK3897;gene_synonym=JW3875;ec_number=2.7.1.5;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=rhamnulokinase;protein_id=AAC76886.1;db_xref=GI:1790338;db_xref=ASAP:ABE-0012738;db_xref=UniProtKB/Swiss-Prot:P32171;db_xref=EcoGene:EG11868 EMBL gene 4097736 4098572 . + . ID=.8478;gene=rhaS;locus_tag=b3905;gene_synonym=ECK3898;gene_synonym=JW3876;gene_synonym=rhaC2;db_xref=EcoGene:EG10843 EMBL CDS 4097736 4098572 . + 0 ID=.8479;gene=rhaS;locus_tag=b3905;gene_synonym=ECK3898;gene_synonym=JW3876;gene_synonym=rhaC2;function=regulator%3B Degradation of small molecules: Carbon compounds;note=positive regulator for rhaBAD operon%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=transcriptional activator of rhaBAD and rhaT;protein_id=AAC76887.1;db_xref=GI:1790339;db_xref=ASAP:ABE-0012745;db_xref=UniProtKB/Swiss-Prot:P09377;db_xref=EcoGene:EG10843 EMBL gene 4098646 4099494 . + . ID=.8480;gene=rhaR;locus_tag=b3906;gene_synonym=ECK3899;gene_synonym=JW3877;gene_synonym=rhaC1;db_xref=EcoGene:EG10842 EMBL CDS 4098646 4099494 . + 0 ID=.8481;gene=rhaR;locus_tag=b3906;gene_synonym=ECK3899;gene_synonym=JW3877;gene_synonym=rhaC1;function=regulator%3B Degradation of small molecules: Carbon compounds;note=positive regulator for rhaRS operon%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=transcriptional activator of rhaSR;protein_id=AAC76888.2;db_xref=GI:171474011;db_xref=ASAP:ABE-0012747;db_xref=UniProtKB/Swiss-Prot:P09378;db_xref=EcoGene:EG10842 EMBL gene 4099491 4100525 . - . ID=.8482;gene=rhaT;locus_tag=b3907;gene_synonym=ECK3900;gene_synonym=JW3878;db_xref=EcoGene:EG11313 EMBL CDS 4099491 4100525 . - 0 ID=.8483;gene=rhaT;locus_tag=b3907;gene_synonym=ECK3900;gene_synonym=JW3878;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=rhamnose transport%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=L-rhamnose:proton symporter;protein_id=AAC76889.1;db_xref=GI:1790341;db_xref=ASAP:ABE-0012749;db_xref=UniProtKB/Swiss-Prot:P27125;db_xref=EcoGene:EG11313 EMBL gene 4100810 4101430 . + . ID=.8484;gene=sodA;locus_tag=b3908;gene_synonym=ECK3901;gene_synonym=JW3879;db_xref=EcoGene:EG10953 EMBL CDS 4100810 4101430 . + 0 ID=.8485;gene=sodA;locus_tag=b3908;gene_synonym=ECK3901;gene_synonym=JW3879;ec_number=1.15.1.1;function=enzyme%3B Detoxification;note=superoxide dismutase%2C manganese%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006805 - xenobiotic metabolic process;codon_start=1;transl_table=11;product=superoxide dismutase%2C Mn;protein_id=AAC76890.1;db_xref=GI:1790342;db_xref=ASAP:ABE-0012761;db_xref=UniProtKB/Swiss-Prot:P00448;db_xref=EcoGene:EG10953 EMBL gene 4101690 4102673 . + . ID=.8486;gene=kdgT;locus_tag=b3909;gene_synonym=ECK3902;gene_synonym=JW5560;db_xref=EcoGene:EG11869 EMBL CDS 4101690 4102673 . + 0 ID=.8487;gene=kdgT;locus_tag=b3909;gene_synonym=ECK3902;gene_synonym=JW5560;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=2-keto-3-deoxy-D-gluconate transport system%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=2-keto-3-deoxy-D-gluconate transporter;protein_id=AAC76891.2;db_xref=GI:87082349;db_xref=ASAP:ABE-0012764;db_xref=UniProtKB/Swiss-Prot:P0A712;db_xref=EcoGene:EG11869 EMBL repeat_region 4102696 4102721 . + . ID=.8488;note=REP300 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 4102822 4103496 . + . ID=.8489;gene=yiiM;locus_tag=b3910;gene_synonym=ECK3903;gene_synonym=JW5559;db_xref=EcoGene:EG11870 EMBL CDS 4102822 4103496 . + 0 ID=.8490;gene=yiiM;locus_tag=b3910;gene_synonym=ECK3903;gene_synonym=JW5559;codon_start=1;transl_table=11;product=6-N-hydroxylaminopurine resistance protein;protein_id=AAC76892.2;db_xref=GI:87082350;db_xref=ASAP:ABE-0012769;db_xref=UniProtKB/Swiss-Prot:P32157;db_xref=EcoGene:EG11870 EMBL repeat_region 4103507 4103590 . + . ID=.8491;note=REP301 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 4103602 4104975 . - . ID=.8492;gene=cpxA;locus_tag=b3911;gene_synonym=ecfB;gene_synonym=ECK3904;gene_synonym=eup;gene_synonym=JW3882;gene_synonym=rssE;gene_synonym=ssd;db_xref=EcoGene:EG10163 EMBL CDS 4103602 4104975 . - 0 ID=.8493;gene=cpxA;locus_tag=b3911;gene_synonym=ecfB;gene_synonym=ECK3904;gene_synonym=eup;gene_synonym=JW3882;gene_synonym=rssE;gene_synonym=ssd;function=putative regulator%3B Global regulatory functions;note=probable sensor protein (histidine protein kinase)%2C acting on arcA%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006464 - protein modification process%3B GO_process: GO:0006805 - xenobiotic metabolic process;codon_start=1;transl_table=11;product=sensory histidine kinase in two-component regulatory system with CpxR;protein_id=AAC76893.1;db_xref=GI:1790346;db_xref=ASAP:ABE-0012772;db_xref=UniProtKB/Swiss-Prot:P0AE82;db_xref=EcoGene:EG10163 EMBL gene 4104972 4105670 . - . ID=.8494;gene=cpxR;locus_tag=b3912;gene_synonym=ECK3905;gene_synonym=JW3883;gene_synonym=yiiA;db_xref=EcoGene:EG10020 EMBL CDS 4104972 4105670 . - 0 ID=.8495;gene=cpxR;locus_tag=b3912;gene_synonym=ECK3905;gene_synonym=JW3883;gene_synonym=yiiA;function=putative regulator%3B Not classified;note=transcriptional regulator in 2-component system%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0006350 - transcription%3B GO_process: GO:0006805 - xenobiotic metabolic process;codon_start=1;transl_table=11;product=response regulator in two-component regulatory system with CpxA;protein_id=AAC76894.1;db_xref=GI:2367329;db_xref=ASAP:ABE-0012774;db_xref=UniProtKB/Swiss-Prot:P0AE88;db_xref=EcoGene:EG10020 EMBL gene 4105820 4106320 . + . ID=.8496;gene=cpxP;locus_tag=b4484;gene_synonym=ECK3906;gene_synonym=JW5558;gene_synonym=yiiO;db_xref=EcoGene:EG11872 EMBL CDS 4105820 4106320 . + 0 ID=.8497;gene=cpxP;locus_tag=b4484;gene_synonym=ECK3906;gene_synonym=JW5558;gene_synonym=yiiO;note=periplasmic repressor of cpx regulon by interaction with CpxA%3B GO_component: GO:0005737 - cytoplasm%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0006350 - transcription%3B GO_process: GO:0006805 - xenobiotic metabolic process;codon_start=1;transl_table=11;product=inhibitor of the cpx response%3B periplasmic adaptor protein;protein_id=AAT48235.1;db_xref=GI:48994991;db_xref=ASAP:ABE-0174117;db_xref=UniProtKB/Swiss-Prot:P0AE85;db_xref=EcoGene:EG11872 EMBL gene 4106469 4107371 . + . ID=.8498;gene=fieF;locus_tag=b3915;gene_synonym=ECK3907;gene_synonym=JW3886;gene_synonym=yiiP;db_xref=EcoGene:EG11873 EMBL CDS 4106469 4107371 . + 0 ID=.8499;gene=fieF;locus_tag=b3915;gene_synonym=ECK3907;gene_synonym=JW3886;gene_synonym=yiiP;function=putative transport%3B Not classified;note=putative transport system permease protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=ferrous iron and zinc transporter;protein_id=AAC76897.1;db_xref=GI:1790349;db_xref=ASAP:ABE-0012786;db_xref=UniProtKB/Swiss-Prot:P69380;db_xref=EcoGene:EG11873 EMBL gene 4107552 4108514 . + . ID=.8500;gene=pfkA;locus_tag=b3916;gene_synonym=ECK3908;gene_synonym=JW3887;db_xref=EcoGene:EG10699 EMBL CDS 4107552 4108514 . + 0 ID=.8501;gene=pfkA;locus_tag=b3916;gene_synonym=ECK3908;gene_synonym=JW3887;ec_number=2.7.1.11;function=enzyme%3B Energy metabolism%2C carbon: Glycolysis;experiment=N-terminus verified by Edman degradation: PMID 17895580;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=6-phosphofructokinase I;protein_id=AAC76898.1;db_xref=GI:1790350;db_xref=ASAP:ABE-0012789;db_xref=UniProtKB/Swiss-Prot:P0A796;db_xref=EcoGene:EG10699 EMBL repeat_region 4108571 4108668 . + . ID=.8502;note=RIP302 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 4108834 4109823 . + . ID=.8503;gene=sbp;locus_tag=b3917;gene_synonym=ECK3909;gene_synonym=JW3888;db_xref=EcoGene:EG10929 EMBL CDS 4108834 4109823 . + 0 ID=.8504;gene=sbp;locus_tag=b3917;gene_synonym=ECK3909;gene_synonym=JW3888;function=transport%3B Transport of small molecules: Anions;note=periplasmic sulfate-binding protein%3B periplasmic-binding component of ABC superfamily%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0006790 - sulfur metabolic process;codon_start=1;transl_table=11;product=sulfate transporter subunit;protein_id=AAC76899.1;db_xref=GI:1790351;db_xref=ASAP:ABE-0012794;db_xref=UniProtKB/Swiss-Prot:P0AG78;db_xref=EcoGene:EG10929 EMBL gene 4109930 4110685 . + . ID=.8505;gene=cdh;locus_tag=b3918;gene_synonym=ECK3910;gene_synonym=JW3889;gene_synonym=pnuE;gene_synonym=ushB;db_xref=EcoGene:EG10138 EMBL CDS 4109930 4110685 . + 0 ID=.8506;gene=cdh;locus_tag=b3918;gene_synonym=ECK3910;gene_synonym=JW3889;gene_synonym=pnuE;gene_synonym=ushB;ec_number=3.6.1.26;function=enzyme%3B Fatty acid and phosphatidic acid biosynthesis;codon_start=1;transl_table=11;product=CDP-diacylglycerol phosphotidylhydrolase;protein_id=AAC76900.1;db_xref=GI:1790352;db_xref=ASAP:ABE-0012797;db_xref=UniProtKB/Swiss-Prot:P06282;db_xref=EcoGene:EG10138 EMBL repeat_region 4110710 4110728 . + . ID=.8507;note=REP303 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 4110740 4111507 . - . ID=.8508;gene=tpiA;locus_tag=b3919;gene_synonym=ECK3911;gene_synonym=JW3890;gene_synonym=tpi;db_xref=EcoGene:EG11015 EMBL CDS 4110740 4111507 . - 0 ID=.8509;gene=tpiA;locus_tag=b3919;gene_synonym=ECK3911;gene_synonym=JW3890;gene_synonym=tpi;ec_number=5.3.1.1;function=enzyme%3B Energy metabolism%2C carbon: Glycolysis;experiment=N-terminus verified by Edman degradation: PMID 8740179%2C9298646%2C9600841%2C17895580;note=GO_process: GO:0006096 - glycolysis;codon_start=1;transl_table=11;product=triosephosphate isomerase;protein_id=AAC76901.1;db_xref=GI:1790353;db_xref=ASAP:ABE-0012799;db_xref=UniProtKB/Swiss-Prot:P0A858;db_xref=EcoGene:EG11015 EMBL gene 4111615 4112214 . - . ID=.8510;gene=yiiQ;locus_tag=b3920;gene_synonym=ECK3912;gene_synonym=JW3891;db_xref=EcoGene:EG11874 EMBL CDS 4111615 4112214 . - 0 ID=.8511;gene=yiiQ;locus_tag=b3920;gene_synonym=ECK3912;gene_synonym=JW3891;codon_start=1;transl_table=11;product=DUF1454 family putative periplasmic protein;protein_id=AAC76902.1;db_xref=GI:1790354;db_xref=ASAP:ABE-0012802;db_xref=UniProtKB/Swiss-Prot:P32160;db_xref=EcoGene:EG11874 EMBL gene 4112315 4112755 . + . ID=.8512;gene=yiiR;locus_tag=b3921;gene_synonym=ECK3913;gene_synonym=JW3892;db_xref=EcoGene:EG11875 EMBL CDS 4112315 4112755 . + 0 ID=.8513;gene=yiiR;locus_tag=b3921;gene_synonym=ECK3913;gene_synonym=JW3892;codon_start=1;transl_table=11;product=DUF805 family putative inner membrane protein;protein_id=AAC76903.1;db_xref=GI:1790355;db_xref=ASAP:ABE-0012809;db_xref=UniProtKB/Swiss-Prot:P0AF34;db_xref=EcoGene:EG11875 EMBL gene 4112967 4113266 . + . ID=.8514;gene=yiiS;locus_tag=b3922;gene_synonym=ECK3914;gene_synonym=JW3893;db_xref=EcoGene:EG11876 EMBL CDS 4112967 4113266 . + 0 ID=.8515;gene=yiiS;locus_tag=b3922;gene_synonym=ECK3914;gene_synonym=JW3893;codon_start=1;transl_table=11;product=UPF0381 family protein;protein_id=AAC76904.1;db_xref=GI:1790357;db_xref=ASAP:ABE-0012813;db_xref=UniProtKB/Swiss-Prot:P32162;db_xref=EcoGene:EG11876 EMBL gene 4113293 4113721 . + . ID=.8516;gene=uspD;locus_tag=b3923;gene_synonym=ECK3915;gene_synonym=JW3894;gene_synonym=yiiT;db_xref=EcoGene:EG11877 EMBL CDS 4113293 4113721 . + 0 ID=.8517;gene=uspD;locus_tag=b3923;gene_synonym=ECK3915;gene_synonym=JW3894;gene_synonym=yiiT;function=putative regulator%3B Not classified;note=putative regulator%3B GO_process: GO:0006950 - response to stress;codon_start=1;transl_table=11;product=stress-induced protein;protein_id=AAC76905.1;db_xref=GI:1790358;db_xref=ASAP:ABE-0012816;db_xref=UniProtKB/Swiss-Prot:P0AAB8;db_xref=EcoGene:EG11877 EMBL gene 4113726 4114472 . - . ID=.8518;gene=fpr;locus_tag=b3924;gene_synonym=ECK3916;gene_synonym=flxR;gene_synonym=JW3895;db_xref=EcoGene:EG11518 EMBL CDS 4113726 4114472 . - 0 ID=.8519;gene=fpr;locus_tag=b3924;gene_synonym=ECK3916;gene_synonym=flxR;gene_synonym=JW3895;ec_number=1.18.1.2;function=enzyme%3B Central intermediary metabolism: Pool%2C multipurpose conversions;note=GO_process: GO:0006805 - xenobiotic metabolic process;codon_start=1;transl_table=11;product=ferredoxin-NADP reductase%3B flavodoxin reductase;protein_id=AAC76906.1;db_xref=GI:1790359;db_xref=ASAP:ABE-0012818;db_xref=UniProtKB/Swiss-Prot:P28861;db_xref=EcoGene:EG11518 EMBL gene 4114569 4115579 . - . ID=.8520;gene=glpX;locus_tag=b3925;gene_synonym=ECK3917;gene_synonym=JW3896;db_xref=EcoGene:EG11517 EMBL CDS 4114569 4115579 . - 0 ID=.8521;gene=glpX;locus_tag=b3925;gene_synonym=ECK3917;gene_synonym=JW3896;ec_number=3.1.3.11;function=phenotype%3B Not classified;note=not required for growth on glycerol%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0008652 - cellular amino acid biosynthetic process;codon_start=1;transl_table=11;product=fructose 1%2C6-bisphosphatase II;protein_id=AAC76907.1;db_xref=GI:1790360;db_xref=ASAP:ABE-0012821;db_xref=UniProtKB/Swiss-Prot:P0A9C9;db_xref=EcoGene:EG11517 EMBL repeat_region 4115677 4115706 . + . ID=.8522;note=REP304 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 4115714 4117222 . - . ID=.8523;gene=glpK;locus_tag=b3926;gene_synonym=ECK3918;gene_synonym=JW3897;db_xref=EcoGene:EG10398 EMBL CDS 4115714 4117222 . - 0 ID=.8524;gene=glpK;locus_tag=b3926;gene_synonym=ECK3918;gene_synonym=JW3897;ec_number=2.7.1.30;function=enzyme%3B Central intermediary metabolism: Pool%2C multipurpose conversions;note=GO_process: GO:0006071 - glycerol metabolic process;codon_start=1;transl_table=11;product=glycerol kinase;protein_id=AAC76908.1;db_xref=GI:1790361;db_xref=ASAP:ABE-0012825;db_xref=UniProtKB/Swiss-Prot:P0A6F3;db_xref=EcoGene:EG10398 EMBL gene 4117245 4118090 . - . ID=.8525;gene=glpF;locus_tag=b3927;gene_synonym=ECK3919;gene_synonym=JW3898;db_xref=EcoGene:EG10396 EMBL CDS 4117245 4118090 . - 0 ID=.8526;gene=glpF;locus_tag=b3927;gene_synonym=ECK3919;gene_synonym=JW3898;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=facilitated diffusion of glycerol%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006071 - glycerol metabolic process;codon_start=1;transl_table=11;product=glycerol facilitator;protein_id=AAC76909.1;db_xref=GI:1790362;db_xref=ASAP:ABE-0012828;db_xref=UniProtKB/Swiss-Prot:P0AER0;db_xref=EcoGene:EG10396 EMBL gene 4118515 4118760 . + . ID=.8527;gene=zapB;locus_tag=b3928;gene_synonym=ECK3920;gene_synonym=JW3899;gene_synonym=yiiU;db_xref=EcoGene:EG11878 EMBL CDS 4118515 4118760 . + 0 ID=.8528;gene=zapB;locus_tag=b3928;gene_synonym=ECK3920;gene_synonym=JW3899;gene_synonym=yiiU;codon_start=1;transl_table=11;product=FtsZ stabilizer%2C septal ring assembly factor%2C cell division stimulator;protein_id=AAC76910.1;db_xref=GI:1790363;db_xref=ASAP:ABE-0012835;db_xref=UniProtKB/Swiss-Prot:P0AF36;db_xref=EcoGene:EG11878 EMBL gene 4118845 4119330 . - . ID=.8529;gene=rraA;locus_tag=b3929;gene_synonym=ECK3921;gene_synonym=JW3900;gene_synonym=menG;gene_synonym=yiiV;db_xref=EcoGene:EG11879 EMBL CDS 4118845 4119330 . - 0 ID=.8530;gene=rraA;locus_tag=b3929;gene_synonym=ECK3921;gene_synonym=JW3900;gene_synonym=menG;gene_synonym=yiiV;codon_start=1;transl_table=11;product=ribonuclease E (RNase E) inhibitor protein;protein_id=AAC76911.1;db_xref=GI:1790364;db_xref=ASAP:ABE-0012837;db_xref=UniProtKB/Swiss-Prot:P0A8R0;db_xref=EcoGene:EG11879 EMBL gene 4119423 4120349 . - . ID=.8531;gene=menA;locus_tag=b3930;gene_synonym=ECK3922;gene_synonym=JW3901;gene_synonym=yiiW;db_xref=EcoGene:EG11880 EMBL CDS 4119423 4120349 . - 0 ID=.8532;gene=menA;locus_tag=b3930;gene_synonym=ECK3922;gene_synonym=JW3901;gene_synonym=yiiW;ec_number=2.5.1.-;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Menaquinone%2C ubiquinone;note=1%2C4-dihydroxy-2-naphthoate --> dimethylmenaquinone%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=1%2C4-dihydroxy-2-naphthoate octaprenyltransferase;protein_id=AAC76912.1;db_xref=GI:1790365;db_xref=ASAP:ABE-0012841;db_xref=UniProtKB/Swiss-Prot:P32166;db_xref=EcoGene:EG11880 EMBL gene 4120416 4121747 . - . ID=.8533;gene=hslU;locus_tag=b3931;gene_synonym=clpY;gene_synonym=ECK3923;gene_synonym=htpI;gene_synonym=JW3902;db_xref=EcoGene:EG11881 EMBL CDS 4120416 4121747 . - 0 ID=.8534;gene=hslU;locus_tag=b3931;gene_synonym=clpY;gene_synonym=ECK3923;gene_synonym=htpI;gene_synonym=JW3902;function=factor%3B Adaptations%2C atypical conditions;note=heat shock protein hslVU%2C ATPase subunit%2C homologous to chaperones%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0008233 - peptidase activity%3B GO_process: GO:0006508 - proteolysis%3B GO_process: GO:0006457 - protein folding%3B GO_process: GO:0009266 - response to temperature stimulus;codon_start=1;transl_table=11;product=molecular chaperone and ATPase component of HslUV protease;protein_id=AAC76913.1;db_xref=GI:1790366;db_xref=ASAP:ABE-0012843;db_xref=UniProtKB/Swiss-Prot:P0A6H5;db_xref=EcoGene:EG11881 EMBL gene 4121757 4122287 . - . ID=.8535;gene=hslV;locus_tag=b3932;gene_synonym=clpQ;gene_synonym=ECK3924;gene_synonym=htpO;gene_synonym=JW3903;gene_synonym=yiiC;db_xref=EcoGene:EG11676 EMBL CDS 4121757 4122287 . - 0 ID=.8536;gene=hslV;locus_tag=b3932;gene_synonym=clpQ;gene_synonym=ECK3924;gene_synonym=htpO;gene_synonym=JW3903;gene_synonym=yiiC;ec_number=3.4.25.-;function=enzyme%3B Degradation of proteins%2C peptides%2C glyco;note=heat shock protein hslVU%2C proteasome-related peptidase subunit%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0008233 - peptidase activity%3B GO_process: GO:0006508 - proteolysis%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=peptidase component of the HslUV protease;protein_id=AAC76914.1;db_xref=GI:1790367;db_xref=ASAP:ABE-0012845;db_xref=UniProtKB/Swiss-Prot:P0A7B8;db_xref=EcoGene:EG11676 EMBL gene 4122380 4123339 . - . ID=.8537;gene=ftsN;locus_tag=b3933;gene_synonym=ECK3925;gene_synonym=JW3904;gene_synonym=msgA;db_xref=EcoGene:EG11529 EMBL CDS 4122380 4123339 . - 0 ID=.8538;gene=ftsN;locus_tag=b3933;gene_synonym=ECK3925;gene_synonym=JW3904;gene_synonym=msgA;function=phenotype%3B Cell division;note=GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=essential cell division protein;protein_id=AAC76915.1;db_xref=GI:1790368;db_xref=ASAP:ABE-0012850;db_xref=UniProtKB/Swiss-Prot:P29131;db_xref=EcoGene:EG11529 EMBL gene 4123431 4124456 . - . ID=.8539;gene=cytR;locus_tag=b3934;gene_synonym=ECK3926;gene_synonym=JW3905;db_xref=EcoGene:EG10200 EMBL CDS 4123431 4124456 . - 0 ID=.8540;gene=cytR;locus_tag=b3934;gene_synonym=ECK3926;gene_synonym=JW3905;function=regulator%3B Global regulatory functions;note=regulator for deo operon%2C udp%2C cdd%2C tsx%2C nupC%2C and nupG%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=Anti-activator for CytR-CRP nucleoside utilization regulon;protein_id=AAC76916.1;db_xref=GI:1790369;db_xref=ASAP:ABE-0012853;db_xref=UniProtKB/Swiss-Prot:P0ACN7;db_xref=EcoGene:EG10200 EMBL gene 4124612 4126810 . - . ID=.8541;gene=priA;locus_tag=b3935;gene_synonym=ECK3927;gene_synonym=JW3906;gene_synonym=srgA;db_xref=EcoGene:EG10763 EMBL CDS 4124612 4126810 . - 0 ID=.8542;gene=priA;locus_tag=b3935;gene_synonym=ECK3927;gene_synonym=JW3906;gene_synonym=srgA;function=factor%3B DNA - replication%2C repair%2C restriction/modification;experiment=N-terminus verified by Edman degradation: PMID 2162049%2C2162050;note=primosomal protein N'(%3D factor Y)(putative helicase)%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006261 - DNA-dependent DNA replication;codon_start=1;transl_table=11;product=Primosome factor n' (replication factor Y);protein_id=AAC76917.1;db_xref=GI:1790370;db_xref=ASAP:ABE-0012860;db_xref=UniProtKB/Swiss-Prot:P17888;db_xref=EcoGene:EG10763 EMBL gene 4127013 4127225 . + . ID=.8543;gene=rpmE;locus_tag=b3936;gene_synonym=ECK3928;gene_synonym=JW3907;db_xref=EcoGene:EG10889 EMBL CDS 4127013 4127225 . + 0 ID=.8544;gene=rpmE;locus_tag=b3936;gene_synonym=ECK3928;gene_synonym=JW3907;function=structural component%3B Ribosomal proteins - synthesis%2C modification;experiment=N-terminus verified by Edman degradation: PMID 339950%2C10739205;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0003735 - structural constituent of ribosome%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=50S ribosomal subunit protein L31;protein_id=AAC76918.1;db_xref=GI:1790371;db_xref=ASAP:ABE-0012867;db_xref=UniProtKB/Swiss-Prot:P0A7M9;db_xref=EcoGene:EG10889 EMBL gene 4127286 4127894 . - . ID=.8545;gene=yiiX;locus_tag=b3937;gene_synonym=ECK3929;gene_synonym=JW3908;db_xref=EcoGene:EG11882 EMBL CDS 4127286 4127894 . - 0 ID=.8546;gene=yiiX;locus_tag=b3937;gene_synonym=ECK3929;gene_synonym=JW3908;codon_start=1;transl_table=11;product=putative lipid binding hydrolase%2C DUF830 family protein;protein_id=AAC76919.1;db_xref=GI:1790372;db_xref=ASAP:ABE-0012869;db_xref=UniProtKB/Swiss-Prot:P32167;db_xref=EcoGene:EG11882 EMBL repeat_region 4127952 4128048 . + . ID=.8547;note=RIP305 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 4128078 4128395 . - . ID=.8548;gene=metJ;locus_tag=b3938;gene_synonym=ECK3930;gene_synonym=JW3909;db_xref=EcoGene:EG10588 EMBL CDS 4128078 4128395 . - 0 ID=.8549;gene=metJ;locus_tag=b3938;gene_synonym=ECK3930;gene_synonym=JW3909;function=regulator%3B Amino acid biosynthesis: Methionine;note=repressor of all met genes but metF%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0009086 - methionine biosynthetic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=transcriptional repressor%2C S-adenosylmethionine-binding;protein_id=AAC76920.1;db_xref=GI:1790373;db_xref=ASAP:ABE-0012874;db_xref=UniProtKB/Swiss-Prot:P0A8U6;db_xref=EcoGene:EG10588 EMBL gene 4128672 4129832 . + . ID=.8550;gene=metB;locus_tag=b3939;gene_synonym=ECK3931;gene_synonym=JW3910;gene_synonym=met-1;db_xref=EcoGene:EG10582 EMBL CDS 4128672 4129832 . + 0 ID=.8551;gene=metB;locus_tag=b3939;gene_synonym=ECK3931;gene_synonym=JW3910;gene_synonym=met-1;ec_number=2.5.1.48;function=enzyme%3B Amino acid biosynthesis: Methionine;note=cystathionine gamma-synthase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009063 - cellular amino acid catabolic process%3B GO_process: GO:0009086 - methionine biosynthetic process;codon_start=1;transl_table=11;product=cystathionine gamma-synthase%2C PLP-dependent;protein_id=AAC76921.1;db_xref=GI:1790375;db_xref=ASAP:ABE-0012887;db_xref=UniProtKB/Swiss-Prot:P00935;db_xref=EcoGene:EG10582 EMBL gene 4129835 4132267 . + . ID=.8552;gene=metL;locus_tag=b3940;gene_synonym=ECK3932;gene_synonym=JW3911;gene_synonym=metM;db_xref=EcoGene:EG10590 EMBL CDS 4129835 4132267 . + 0 ID=.8553;gene=metL;locus_tag=b3940;gene_synonym=ECK3932;gene_synonym=JW3911;gene_synonym=metM;ec_number=1.1.1.3;ec_number=2.7.2.4;function=enzyme%3B Amino acid biosynthesis: Methionine;note=aspartokinase II and homoserine dehydrogenase II%3B GO_process: GO:0009086 - methionine biosynthetic process%3B GO_process: GO:0009090 - homoserine biosynthetic process;codon_start=1;transl_table=11;product=Bifunctional aspartokinase/homoserine dehydrogenase 2;protein_id=AAC76922.1;db_xref=GI:1790376;db_xref=ASAP:ABE-0012889;db_xref=UniProtKB/Swiss-Prot:P00562;db_xref=EcoGene:EG10590 EMBL repeat_region 4132347 4132380 . + . ID=.8554;note=REP306 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 4132616 4133506 . + . ID=.8555;gene=metF;locus_tag=b3941;gene_synonym=ECK3933;gene_synonym=JW3913;db_xref=EcoGene:EG10585 EMBL CDS 4132616 4133506 . + 0 ID=.8556;gene=metF;locus_tag=b3941;gene_synonym=ECK3933;gene_synonym=JW3913;ec_number=1.5.1.20;function=enzyme%3B Central intermediary metabolism: Pool%2C multipurpose conversions;codon_start=1;transl_table=11;product=5%2C10-methylenetetrahydrofolate reductase;protein_id=AAC76923.1;db_xref=GI:1790377;db_xref=ASAP:ABE-0012897;db_xref=UniProtKB/Swiss-Prot:P0AEZ1;db_xref=EcoGene:EG10585 EMBL gene 4133835 4136015 . + . ID=.8557;gene=katG;locus_tag=b3942;gene_synonym=ECK3934;gene_synonym=JW3914;db_xref=EcoGene:EG10511 EMBL CDS 4133835 4136015 . + 0 ID=.8558;gene=katG;locus_tag=b3942;gene_synonym=ECK3934;gene_synonym=JW3914;ec_number=1.11.1.6;function=enzyme%3B Detoxification;note=catalase%3B hydroperoxidase HPI(I)%3B GO_process: GO:0006805 - xenobiotic metabolic process;codon_start=1;transl_table=11;product=catalase-peroxidase HPI%2C heme b-containing;protein_id=AAC76924.1;db_xref=GI:1790378;db_xref=ASAP:ABE-0012901;db_xref=UniProtKB/Swiss-Prot:P13029;db_xref=EcoGene:EG10511 EMBL gene 4136108 4137013 . + . ID=.8559;gene=yijE;locus_tag=b3943;gene_synonym=ECK3935;gene_synonym=JW5557;db_xref=EcoGene:EG11902 EMBL CDS 4136108 4137013 . + 0 ID=.8560;gene=yijE;locus_tag=b3943;gene_synonym=ECK3935;gene_synonym=JW5557;note=GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=EamA-like transporter family protein;protein_id=AAC76925.2;db_xref=GI:87082351;db_xref=ASAP:ABE-0012906;db_xref=UniProtKB/Swiss-Prot:P0ABT8;db_xref=EcoGene:EG11902 EMBL gene 4137040 4137657 . - . ID=.8561;gene=yijF;locus_tag=b3944;gene_synonym=ECK3936;gene_synonym=JW3916;db_xref=EcoGene:EG11903 EMBL CDS 4137040 4137657 . - 0 ID=.8562;gene=yijF;locus_tag=b3944;gene_synonym=ECK3936;gene_synonym=JW3916;codon_start=1;transl_table=11;product=DUF1287 family protein;protein_id=AAC76926.1;db_xref=GI:1790380;db_xref=ASAP:ABE-0012908;db_xref=UniProtKB/Swiss-Prot:P32668;db_xref=EcoGene:EG11903 EMBL repeat_region 4137789 4137886 . + . ID=.8563;note=RIP307 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 4137932 4139035 . - . ID=.8564;gene=gldA;locus_tag=b3945;gene_synonym=ECK3937;gene_synonym=JW5556;db_xref=EcoGene:EG11904 EMBL CDS 4137932 4139035 . - 0 ID=.8565;gene=gldA;locus_tag=b3945;gene_synonym=ECK3937;gene_synonym=JW5556;ec_number=1.1.1.6;function=enzyme%3B Central intermediary metabolism: Pool%2C multipurpose conversions;experiment=N-terminus verified by Edman degradation: PMID 17895580;note=glycerol dehydrogenase%2C (NAD)%3B GO_process: GO:0006071 - glycerol metabolic process;codon_start=1;transl_table=11;product=glycerol dehydrogenase%2C NAD+ dependent%3B 1%2C2-propanediol:NAD+ oxidoreductase;protein_id=AAC76927.2;db_xref=GI:87082352;db_xref=ASAP:ABE-0012912;db_xref=UniProtKB/Swiss-Prot:P0A9S5;db_xref=EcoGene:EG11904 EMBL gene 4139046 4139708 . - . ID=.8566;gene=fsaB;locus_tag=b3946;gene_synonym=ECK3938;gene_synonym=JW3918;gene_synonym=talC;gene_synonym=yijG;db_xref=EcoGene:EG11905 EMBL CDS 4139046 4139708 . - 0 ID=.8567;gene=fsaB;locus_tag=b3946;gene_synonym=ECK3938;gene_synonym=JW3918;gene_synonym=talC;gene_synonym=yijG;ec_number=4.1.2.-;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=fructose-6-phosphate aldolase 2;protein_id=AAC76928.1;db_xref=GI:1790382;db_xref=ASAP:ABE-0012915;db_xref=UniProtKB/Swiss-Prot:P32669;db_xref=EcoGene:EG11905 EMBL gene 4139720 4142221 . - . ID=.8568;gene=frwA;locus_tag=b3947;gene_synonym=ECK3939;gene_synonym=JW5555;gene_synonym=ptsA;gene_synonym=yijH;db_xref=EcoGene:EG11906 EMBL CDS 4139720 4142221 . - 0 ID=.8569;gene=frwA;locus_tag=b3947;gene_synonym=ECK3939;gene_synonym=JW5555;gene_synonym=ptsA;gene_synonym=yijH;ec_number=2.7.1.69;ec_number=2.7.3.9;function=enzyme%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=PEP-protein phosphotransferase system enzyme I%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=putative PTS enzyme: Hpr%2C enzyme I and II components;protein_id=AAT48236.1;db_xref=GI:48994992;db_xref=ASAP:ABE-0012920;db_xref=UniProtKB/Swiss-Prot:P32670;db_xref=EcoGene:EG11906 EMBL gene 4142530 4143609 . + . ID=.8570;gene=frwC;locus_tag=b3949;gene_synonym=ECK3940;gene_synonym=JW3921;gene_synonym=yijJ;db_xref=EcoGene:EG11908 EMBL CDS 4142530 4143609 . + 0 ID=.8571;gene=frwC;locus_tag=b3949;gene_synonym=ECK3940;gene_synonym=JW3921;gene_synonym=yijJ;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=PTS system%2C fructose-like enzyme II component;codon_start=1;transl_table=11;product=putative enzyme IIC component of PTS;protein_id=AAC76931.1;db_xref=GI:1790386;db_xref=ASAP:ABE-0012928;db_xref=UniProtKB/Swiss-Prot:P32672;db_xref=EcoGene:EG11908 EMBL gene 4143624 4143944 . + . ID=.8572;gene=frwB;locus_tag=b3950;gene_synonym=ECK3941;gene_synonym=JW3922;gene_synonym=yijK;db_xref=EcoGene:EG11909 EMBL CDS 4143624 4143944 . + 0 ID=.8573;gene=frwB;locus_tag=b3950;gene_synonym=ECK3941;gene_synonym=JW3922;gene_synonym=yijK;ec_number=2.7.1.69;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=PTS system fructose-like IIB component 1%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=putative enzyme IIB component of PTS;protein_id=AAC76932.1;db_xref=GI:1790387;db_xref=ASAP:ABE-0012930;db_xref=UniProtKB/Swiss-Prot:P69816;db_xref=EcoGene:EG11909 EMBL gene 4143995 4146292 . + . ID=.8574;gene=pflD;locus_tag=b3951;gene_synonym=ECK3942;gene_synonym=JW3923;gene_synonym=yijL;db_xref=EcoGene:EG11910 EMBL CDS 4143995 4146292 . + 0 ID=.8575;gene=pflD;locus_tag=b3951;gene_synonym=ECK3942;gene_synonym=JW3923;gene_synonym=yijL;function=enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;note=formate acetyltransferase 2%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=putative glycine radical domain-containing pyruvate formate-lyase;protein_id=AAC76933.1;db_xref=GI:1790388;db_xref=ASAP:ABE-0012934;db_xref=UniProtKB/Swiss-Prot:P32674;db_xref=EcoGene:EG11910 EMBL gene 4146258 4147136 . + . ID=.8576;gene=pflC;locus_tag=b3952;gene_synonym=ECK3943;gene_synonym=JW3924;gene_synonym=yijM;db_xref=EcoGene:EG11911 EMBL CDS 4146258 4147136 . + 0 ID=.8577;gene=pflC;locus_tag=b3952;gene_synonym=ECK3943;gene_synonym=JW3924;gene_synonym=yijM;function=putative enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;note=probable pyruvate formate lyase activating enzyme 2%3B GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=putative [formate-C-acetyltransferase 2]-activating enzyme%3B pyruvate formate-lyase 1-activating enzyme;protein_id=AAC76934.1;db_xref=GI:1790389;db_xref=ASAP:ABE-0012937;db_xref=UniProtKB/Swiss-Prot:P32675;db_xref=EcoGene:EG11911 EMBL gene 4147138 4147479 . + . ID=.8578;gene=frwD;locus_tag=b3953;gene_synonym=ECK3944;gene_synonym=JW3925;gene_synonym=yijN;db_xref=EcoGene:EG11912 EMBL CDS 4147138 4147479 . + 0 ID=.8579;gene=frwD;locus_tag=b3953;gene_synonym=ECK3944;gene_synonym=JW3925;gene_synonym=yijN;ec_number=2.7.1.69;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=PTS system fructose-like IIB component 2%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=putative enzyme IIB component of PTS;protein_id=AAC76935.1;db_xref=GI:1790390;db_xref=ASAP:ABE-0012941;db_xref=UniProtKB/Swiss-Prot:P32676;db_xref=EcoGene:EG11912 EMBL gene 4147466 4148317 . - . ID=.8580;gene=yijO;locus_tag=b3954;gene_synonym=ECK3945;gene_synonym=JW3926;db_xref=EcoGene:EG11913 EMBL CDS 4147466 4148317 . - 0 ID=.8581;gene=yijO;locus_tag=b3954;gene_synonym=ECK3945;gene_synonym=JW3926;function=putative regulator%3B Not classified;note=putative ARAC-type regulatory protein%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=AraC family putative transcriptional activator;protein_id=AAC76936.1;db_xref=GI:1790391;db_xref=ASAP:ABE-0012943;db_xref=UniProtKB/Swiss-Prot:P32677;db_xref=EcoGene:EG11913 EMBL repeat_region 4148430 4148511 . + . ID=.8582;note=REP308 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 4148532 4150265 . - . ID=.8583;gene=eptC;locus_tag=b3955;gene_synonym=cptA;gene_synonym=ECK3946;gene_synonym=JW3927;gene_synonym=yijP;db_xref=EcoGene:EG11914 EMBL CDS 4148532 4150265 . - 0 ID=.8584;gene=eptC;locus_tag=b3955;gene_synonym=cptA;gene_synonym=ECK3946;gene_synonym=JW3927;gene_synonym=yijP;note=GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=LPS heptose I phosphoethanolamine transferase;protein_id=AAC76937.1;db_xref=GI:1790392;db_xref=ASAP:ABE-0012947;db_xref=UniProtKB/Swiss-Prot:P0CB39;db_xref=EcoGene:EG11914 EMBL gene 4150447 4153098 . - . ID=.8585;gene=ppc;locus_tag=b3956;gene_synonym=asp;gene_synonym=ECK3947;gene_synonym=glu;gene_synonym=JW3928;db_xref=EcoGene:EG10756 EMBL CDS 4150447 4153098 . - 0 ID=.8586;gene=ppc;locus_tag=b3956;gene_synonym=asp;gene_synonym=ECK3947;gene_synonym=glu;gene_synonym=JW3928;ec_number=4.1.1.31;function=enzyme%3B Energy metabolism%2C carbon: Fermentation;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006113 - fermentation%3B GO_process: GO:0006099 - tricarboxylic acid cycle;codon_start=1;transl_table=11;product=phosphoenolpyruvate carboxylase;protein_id=AAC76938.1;db_xref=GI:1790393;db_xref=ASAP:ABE-0012950;db_xref=UniProtKB/Swiss-Prot:P00864;db_xref=EcoGene:EG10756 EMBL repeat_region 4153347 4153692 . + . ID=.8587;note=REP309 (repetitive extragenic palindromic) element%3B contains 6 REP sequences EMBL gene 4153696 4154847 . - . ID=.8588;gene=argE;locus_tag=b3957;gene_synonym=Arg4;gene_synonym=argA;gene_synonym=ECK3948;gene_synonym=JW3929;db_xref=EcoGene:EG11286 EMBL CDS 4153696 4154847 . - 0 ID=.8589;gene=argE;locus_tag=b3957;gene_synonym=Arg4;gene_synonym=argA;gene_synonym=ECK3948;gene_synonym=JW3929;ec_number=3.5.1.16;function=enzyme%3B Amino acid biosynthesis: Arginine;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006526 - arginine biosynthetic process;codon_start=1;transl_table=11;product=acetylornithine deacetylase;protein_id=AAC76939.1;db_xref=GI:1790395;db_xref=ASAP:ABE-0012955;db_xref=UniProtKB/Swiss-Prot:P23908;db_xref=EcoGene:EG11286 EMBL gene 4155001 4156005 . + . ID=.8590;gene=argC;locus_tag=b3958;gene_synonym=Arg2;gene_synonym=argH;gene_synonym=ECK3949;gene_synonym=JW3930;db_xref=EcoGene:EG10065 EMBL CDS 4155001 4156005 . + 0 ID=.8591;gene=argC;locus_tag=b3958;gene_synonym=Arg2;gene_synonym=argH;gene_synonym=ECK3949;gene_synonym=JW3930;ec_number=1.2.1.38;function=enzyme%3B Amino acid biosynthesis: Arginine;note=N-acetyl-gamma-glutamylphosphate reductase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006526 - arginine biosynthetic process;codon_start=1;transl_table=11;product=N-acetyl-gamma-glutamylphosphate reductase%2C NAD(P)-binding;protein_id=AAC76940.1;db_xref=GI:1790396;db_xref=ASAP:ABE-0012964;db_xref=UniProtKB/Swiss-Prot:P11446;db_xref=EcoGene:EG10065 EMBL gene 4156013 4156789 . + . ID=.8592;gene=argB;locus_tag=b3959;gene_synonym=ECK3950;gene_synonym=JW5553;db_xref=EcoGene:EG10064 EMBL CDS 4156013 4156789 . + 0 ID=.8593;gene=argB;locus_tag=b3959;gene_synonym=ECK3950;gene_synonym=JW5553;ec_number=2.7.2.8;function=enzyme%3B Amino acid biosynthesis: Arginine;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006526 - arginine biosynthetic process;codon_start=1;transl_table=11;product=acetylglutamate kinase;protein_id=AAC76941.3;db_xref=GI:145693208;db_xref=ASAP:ABE-0012967;db_xref=UniProtKB/Swiss-Prot:P0A6C8;db_xref=EcoGene:EG10064 EMBL gene 4156850 4158223 . + . ID=.8594;gene=argH;locus_tag=b3960;gene_synonym=ECK3951;gene_synonym=JW3932;db_xref=EcoGene:EG11223 EMBL CDS 4156850 4158223 . + 0 ID=.8595;gene=argH;locus_tag=b3960;gene_synonym=ECK3951;gene_synonym=JW3932;ec_number=4.3.2.1;function=enzyme%3B Amino acid biosynthesis: Arginine;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006526 - arginine biosynthetic process;codon_start=1;transl_table=11;product=argininosuccinate lyase;protein_id=AAC76942.1;db_xref=GI:1790398;db_xref=ASAP:ABE-0012969;db_xref=UniProtKB/Swiss-Prot:P11447;db_xref=EcoGene:EG11223 EMBL gene 4158285 4158394 . - . ID=.8596;gene=oxyS;locus_tag=b4458;gene_synonym=ECK3952;gene_synonym=JWR0098;db_xref=EcoGene:EG31116 EMBL ncRNA 4158285 4158394 . - . ID=.8597;ncrna_class=antisense_RNA;gene=oxyS;locus_tag=b4458;gene_synonym=ECK3952;gene_synonym=JWR0098;product=sRNA antisense regulator activates genes that detoxify oxidative damage%2C Hfq-dependent;note=global regulatory RNA OxyS;function=induced in response to oxidative stress%3B activates or represses expression of many genes;db_xref=ASAP:ABE-0047276;db_xref=EcoGene:EG31116 EMBL gene 4158490 4159407 . + . ID=.8598;gene=oxyR;locus_tag=b3961;gene_synonym=ECK3953;gene_synonym=JW3933;gene_synonym=momR;gene_synonym=mor;db_xref=EcoGene:EG10681 EMBL CDS 4158490 4159407 . + 0 ID=.8599;gene=oxyR;locus_tag=b3961;gene_synonym=ECK3953;gene_synonym=JW3933;gene_synonym=momR;gene_synonym=mor;function=regulator%3B Global regulatory functions;experiment=N-terminus verified by Edman degradation: PMID 1864839;note=activator%2C hydrogen peroxide-inducible genes%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=oxidative and nitrosative stress transcriptional regulator;protein_id=AAC76943.1;db_xref=GI:1790399;db_xref=ASAP:ABE-0012973;db_xref=UniProtKB/Swiss-Prot:P0ACQ4;db_xref=EcoGene:EG10681 EMBL gene 4159390 4160790 . - . ID=.8600;gene=sthA;locus_tag=b3962;gene_synonym=ECK3954;gene_synonym=JW5551;gene_synonym=sth;gene_synonym=udhA;db_xref=EcoGene:EG11428 EMBL CDS 4159390 4160790 . - 0 ID=.8601;gene=sthA;locus_tag=b3962;gene_synonym=ECK3954;gene_synonym=JW5551;gene_synonym=sth;gene_synonym=udhA;ec_number=1.6.1.1;function=putative enzyme%3B Not classified;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009226 - nucleotide-sugar biosynthetic process;codon_start=1;transl_table=11;product=pyridine nucleotide transhydrogenase%2C soluble;protein_id=AAC76944.2;db_xref=GI:87082354;db_xref=ASAP:ABE-0012975;db_xref=UniProtKB/Swiss-Prot:P27306;db_xref=EcoGene:EG11428 EMBL gene 4161124 4161771 . + . ID=.8602;gene=fabR;locus_tag=b3963;gene_synonym=ECK3955;gene_synonym=JW3935;gene_synonym=yijC;db_xref=EcoGene:EG11394 EMBL CDS 4161124 4161771 . + 0 ID=.8603;gene=fabR;locus_tag=b3963;gene_synonym=ECK3955;gene_synonym=JW3935;gene_synonym=yijC;codon_start=1;transl_table=11;product=transcriptional repressor of fabA and fabB;protein_id=AAC76945.2;db_xref=GI:145693209;db_xref=ASAP:ABE-0012979;db_xref=UniProtKB/Swiss-Prot:P0ACU5;db_xref=EcoGene:EG11394 EMBL gene 4161771 4162130 . + . ID=.8604;gene=yijD;locus_tag=b3964;gene_synonym=ECK3956;gene_synonym=JW3936;db_xref=EcoGene:EG11395 EMBL CDS 4161771 4162130 . + 0 ID=.8605;gene=yijD;locus_tag=b3964;gene_synonym=ECK3956;gene_synonym=JW3936;codon_start=1;transl_table=11;product=DUF1422 family inner membrane protein;protein_id=AAC76946.1;db_xref=GI:1790402;db_xref=ASAP:ABE-0012981;db_xref=UniProtKB/Swiss-Prot:P0AF40;db_xref=EcoGene:EG11395 EMBL repeat_region 4162141 4162162 . + . ID=.8606;note=REP310 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 4162170 4163270 . - . ID=.8607;gene=trmA;locus_tag=b3965;gene_synonym=ECK3957;gene_synonym=JW3937;gene_synonym=rumT;db_xref=EcoGene:EG11022 EMBL CDS 4162170 4163270 . - 0 ID=.8608;gene=trmA;locus_tag=b3965;gene_synonym=ECK3957;gene_synonym=JW3937;gene_synonym=rumT;ec_number=2.1.1.35;function=enzyme%3B tRNA modification;experiment=N-terminus verified by Edman degradation: PMID 2461858;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009451 - RNA modification;codon_start=1;transl_table=11;product=tRNA m(5)U54 methyltransferase%2C SAM-dependent%3B tmRNA m(5)U341 methyltransferase;protein_id=AAC76947.1;db_xref=GI:1790403;db_xref=ASAP:ABE-0012983;db_xref=UniProtKB/Swiss-Prot:P23003;db_xref=EcoGene:EG11022 EMBL gene 4163639 4165483 . + . ID=.8609;gene=btuB;locus_tag=b3966;gene_synonym=bfe;gene_synonym=cer;gene_synonym=dcrC;gene_synonym=ECK3958;gene_synonym=JW3938;db_xref=EcoGene:EG10126 EMBL CDS 4163639 4165483 . + 0 ID=.8610;gene=btuB;locus_tag=b3966;gene_synonym=bfe;gene_synonym=cer;gene_synonym=dcrC;gene_synonym=ECK3958;gene_synonym=JW3938;function=membrane%3B Outer membrane constituents;note=outer membrane receptor for transport of vitamin B12%2C E colicins%2C and bacteriophage BF23%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane;codon_start=1;transl_table=11;product=vitamin B12/cobalamin outer membrane transporter;protein_id=AAC76948.1;db_xref=GI:1790405;db_xref=ASAP:ABE-0012987;db_xref=UniProtKB/Swiss-Prot:P06129;db_xref=EcoGene:EG10126 EMBL gene 4165428 4166285 . + . ID=.8611;gene=murI;locus_tag=b3967;gene_synonym=dga;gene_synonym=ECK3959;gene_synonym=glr;gene_synonym=JW5550;gene_synonym=yijA;db_xref=EcoGene:EG11204 EMBL CDS 4165428 4166285 . + 0 ID=.8612;gene=murI;locus_tag=b3967;gene_synonym=dga;gene_synonym=ECK3959;gene_synonym=glr;gene_synonym=JW5550;gene_synonym=yijA;ec_number=5.1.1.3;function=enzyme%3B Murein sacculus%2C peptidoglycan;note=glutamate racemase%2C required for biosynthesis of D-glutamate and peptidoglycan%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_process: GO:0009252 - peptidoglycan biosynthetic process;codon_start=1;transl_table=11;product=glutamate racemase;protein_id=AAC76949.2;db_xref=GI:87082355;db_xref=ASAP:ABE-0012989;db_xref=UniProtKB/Swiss-Prot:P22634;db_xref=EcoGene:EG11204 EMBL gene 4166659 4168200 . + . ID=.8613;gene=rrsB;locus_tag=b3968;gene_synonym=ECK3960;gene_synonym=JWR0099;db_xref=EcoGene:EG30085 EMBL rRNA 4166659 4168200 . + . ID=.8614;gene=rrsB;locus_tag=b3968;gene_synonym=ECK3960;gene_synonym=JWR0099;product=16S ribosomal RNA of rrnB operon;db_xref=ASAP:ABE-0012991;db_xref=EcoGene:EG30085 EMBL gene 4168372 4168447 . + . ID=.8615;gene=gltT;locus_tag=b3969;gene_synonym=ECK3961;gene_synonym=JWR0100;gene_synonym=tgtB;db_xref=EcoGene:EG30032 EMBL tRNA 4168372 4168447 . + . ID=.8616;gene=gltT;locus_tag=b3969;gene_synonym=ECK3961;gene_synonym=JWR0100;gene_synonym=tgtB;product=tRNA-Glu;note=anticodon: UUC;db_xref=ASAP:ABE-0012993;db_xref=EcoGene:EG30032 EMBL gene 4168641 4171544 . + . ID=.8617;gene=rrlB;locus_tag=b3970;gene_synonym=ECK3962;gene_synonym=JWR0101;db_xref=EcoGene:EG30078 EMBL rRNA 4168641 4171544 . + . ID=.8618;gene=rrlB;locus_tag=b3970;gene_synonym=ECK3962;gene_synonym=JWR0101;product=23S ribosomal RNA of rrnB operon;db_xref=ASAP:ABE-0012995;db_xref=EcoGene:EG30078 EMBL gene 4171637 4171756 . + . ID=.8619;gene=rrfB;locus_tag=b3971;gene_synonym=ECK3963;gene_synonym=JWR0102;db_xref=EcoGene:EG30071 EMBL rRNA 4171637 4171756 . + . ID=.8620;gene=rrfB;locus_tag=b3971;gene_synonym=ECK3963;gene_synonym=JWR0102;product=5S ribosomal RNA of rrnB operon;db_xref=ASAP:ABE-0012997;db_xref=EcoGene:EG30071 EMBL gene 4172057 4173085 . + . ID=.8621;gene=murB;locus_tag=b3972;gene_synonym=ECK3964;gene_synonym=JW3940;gene_synonym=yijB;db_xref=EcoGene:EG11205 EMBL CDS 4172057 4173085 . + 0 ID=.8622;gene=murB;locus_tag=b3972;gene_synonym=ECK3964;gene_synonym=JW3940;gene_synonym=yijB;ec_number=1.3.1.98;function=enzyme%3B Murein sacculus%2C peptidoglycan;note=UDP-N-acetylenolpyruvoylglucosamine reductase%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009252 - peptidoglycan biosynthetic process;codon_start=1;transl_table=11;product=UDP-N-acetylenolpyruvoylglucosamine reductase%2C FAD-binding;protein_id=AAC76950.1;db_xref=GI:1790407;db_xref=ASAP:ABE-0012999;db_xref=UniProtKB/Swiss-Prot:P08373;db_xref=EcoGene:EG11205 EMBL gene 4173082 4174047 . + . ID=.8623;gene=birA;locus_tag=b3973;gene_synonym=bioR;gene_synonym=dhbB;gene_synonym=ECK3965;gene_synonym=JW3941;db_xref=EcoGene:EG10123 EMBL CDS 4173082 4174047 . + 0 ID=.8624;gene=birA;locus_tag=b3973;gene_synonym=bioR;gene_synonym=dhbB;gene_synonym=ECK3965;gene_synonym=JW3941;ec_number=6.3.4.15;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Biotin;note=biotin-[acetylCoA carboxylase] holoenzyme synthetase and biotin operon repressor%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0009102 - biotin biosynthetic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=bifunctional biotin-[acetylCoA carboxylase] holoenzyme synthetase/ DNA-binding transcriptional repressor%2C bio-5'-AMP-binding;protein_id=AAC76951.1;db_xref=GI:1790408;db_xref=ASAP:ABE-0013001;db_xref=UniProtKB/Swiss-Prot:P06709;db_xref=EcoGene:EG10123 EMBL gene 4174076 4175026 . - . ID=.8625;gene=coaA;locus_tag=b3974;gene_synonym=ECK3966;gene_synonym=JW3942;gene_synonym=panK;gene_synonym=rts;gene_synonym=ts-9;db_xref=EcoGene:EG10922 EMBL CDS 4174076 4175026 . - 0 ID=.8626;gene=coaA;locus_tag=b3974;gene_synonym=ECK3966;gene_synonym=JW3942;gene_synonym=panK;gene_synonym=rts;gene_synonym=ts-9;ec_number=2.7.1.33;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Pantothenate;note=GO_process: GO:0015937 - coenzyme A biosynthetic process;codon_start=1;transl_table=11;product=pantothenate kinase;protein_id=AAC76952.1;db_xref=GI:1790409;db_xref=ASAP:ABE-0013003;db_xref=UniProtKB/Swiss-Prot:P0A6I3;db_xref=EcoGene:EG10922 EMBL gene 4175388 4175463 . + . ID=.8627;gene=thrU;locus_tag=b3976;gene_synonym=ECK3967;gene_synonym=JWR0103;db_xref=EcoGene:EG30102 EMBL tRNA 4175388 4175463 . + . ID=.8628;gene=thrU;locus_tag=b3976;gene_synonym=ECK3967;gene_synonym=JWR0103;product=tRNA-Thr;note=anticodon: UGU;db_xref=ASAP:ABE-0013011;db_xref=EcoGene:EG30102 EMBL gene 4175472 4175556 . + . ID=.8629;gene=tyrU;locus_tag=b3977;gene_synonym=ECK3968;gene_synonym=JWR0213;gene_synonym=supM;gene_synonym=supZ;db_xref=EcoGene:EG30107 EMBL tRNA 4175472 4175556 . + . ID=.8630;gene=tyrU;locus_tag=b3977;gene_synonym=ECK3968;gene_synonym=JWR0213;gene_synonym=supM;gene_synonym=supZ;product=tRNA-Tyr;note=anticodon: GUA;db_xref=ASAP:ABE-0013013;db_xref=EcoGene:EG30107 EMBL gene 4175673 4175747 . + . ID=.8631;gene=glyT;locus_tag=b3978;gene_synonym=ECK3969;gene_synonym=JWR0105;gene_synonym=sumA;gene_synonym=sup15B;gene_synonym=supA36;db_xref=EcoGene:EG30036 EMBL tRNA 4175673 4175747 . + . ID=.8632;gene=glyT;locus_tag=b3978;gene_synonym=ECK3969;gene_synonym=JWR0105;gene_synonym=sumA;gene_synonym=sup15B;gene_synonym=supA36;product=tRNA-Gly;note=anticodon: UCC;db_xref=ASAP:ABE-0013016;db_xref=EcoGene:EG30036 EMBL gene 4175754 4175829 . + . ID=.8633;gene=thrT;locus_tag=b3979;gene_synonym=ECK3970;gene_synonym=JWR0106;db_xref=EcoGene:EG30101 EMBL tRNA 4175754 4175829 . + . ID=.8634;gene=thrT;locus_tag=b3979;gene_synonym=ECK3970;gene_synonym=JWR0106;product=tRNA-Thr;note=anticodon: GGU;db_xref=ASAP:ABE-0013018;db_xref=EcoGene:EG30101 EMBL gene 4175944 4177128 . + . ID=.8635;gene=tufB;locus_tag=b3980;gene_synonym=ECK3971;gene_synonym=JW3943;gene_synonym=kirT;gene_synonym=pulT;db_xref=EcoGene:EG11037 EMBL CDS 4175944 4177128 . + 0 ID=.8636;gene=tufB;locus_tag=b3980;gene_synonym=ECK3971;gene_synonym=JW3943;gene_synonym=kirT;gene_synonym=pulT;function=factor%3B Proteins - translation and modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006412 - translation%3B GO_process: GO:0006970 - response to osmotic stress;codon_start=1;transl_table=11;product=translation elongation factor EF-Tu 2;protein_id=AAC76954.1;db_xref=GI:1790412;db_xref=ASAP:ABE-0013020;db_xref=UniProtKB/Swiss-Prot:P0CE48;db_xref=EcoGene:EG11037 EMBL gene 4177358 4177741 . + . ID=.8637;gene=secE;locus_tag=b3981;gene_synonym=ECK3972;gene_synonym=JW3944;gene_synonym=mbrC;gene_synonym=prlG;db_xref=EcoGene:EG10939 EMBL CDS 4177358 4177741 . + 0 ID=.8638;gene=secE;locus_tag=b3981;gene_synonym=ECK3972;gene_synonym=JW3944;gene_synonym=mbrC;gene_synonym=prlG;function=transport%3B Protein%2C peptide secretion;note=preprotein translocase%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=preprotein translocase membrane subunit;protein_id=AAC76955.1;db_xref=GI:1790413;db_xref=ASAP:ABE-0013023;db_xref=UniProtKB/Swiss-Prot:P0AG96;db_xref=EcoGene:EG10939 EMBL gene 4177743 4178288 . + . ID=.8639;gene=nusG;locus_tag=b3982;gene_synonym=ECK3973;gene_synonym=JW3945;db_xref=EcoGene:EG10667 EMBL CDS 4177743 4178288 . + 0 ID=.8640;gene=nusG;locus_tag=b3982;gene_synonym=ECK3973;gene_synonym=JW3945;function=putative factor%3B RNA synthesis%2C modification%2C DNA transcription;note=component in transcription antitermination%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=transcription termination factor;protein_id=AAC76956.1;db_xref=GI:1790414;db_xref=ASAP:ABE-0013026;db_xref=UniProtKB/Swiss-Prot:P0AFG0;db_xref=EcoGene:EG10667 EMBL gene 4178447 4178875 . + . ID=.8641;gene=rplK;locus_tag=b3983;gene_synonym=ECK3974;gene_synonym=JW3946;gene_synonym=relC;db_xref=EcoGene:EG10872 EMBL CDS 4178447 4178875 . + 0 ID=.8642;gene=rplK;locus_tag=b3983;gene_synonym=ECK3974;gene_synonym=JW3946;gene_synonym=relC;function=structural component%3B Ribosomal proteins - synthesis%2C modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0003735 - structural constituent of ribosome%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=50S ribosomal subunit protein L11;protein_id=AAC76957.1;db_xref=GI:2367334;db_xref=ASAP:ABE-0013029;db_xref=UniProtKB/Swiss-Prot:P0A7J7;db_xref=EcoGene:EG10872 EMBL gene 4178879 4179583 . + . ID=.8643;gene=rplA;locus_tag=b3984;gene_synonym=ECK3975;gene_synonym=JW3947;gene_synonym=rpy;db_xref=EcoGene:EG10864 EMBL CDS 4178879 4179583 . + 0 ID=.8644;gene=rplA;locus_tag=b3984;gene_synonym=ECK3975;gene_synonym=JW3947;gene_synonym=rpy;function=structural component%3B Ribosomal proteins - synthesis%2C modification;note=50S ribosomal subunit protein L1%2C regulates synthesis of L1 and L11%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0003735 - structural constituent of ribosome%3B GO_process: GO:0006412 - translation%3B GO_process: GO:0009386 - translational attenuation;codon_start=1;transl_table=11;product=50S ribosomal subunit protein L1;protein_id=AAC76958.1;db_xref=GI:1790416;db_xref=ASAP:ABE-0013031;db_xref=UniProtKB/Swiss-Prot:P0A7L0;db_xref=EcoGene:EG10864 EMBL gene 4179996 4180493 . + . ID=.8645;gene=rplJ;locus_tag=b3985;gene_synonym=ECK3976;gene_synonym=JW3948;db_xref=EcoGene:EG10871 EMBL CDS 4179996 4180493 . + 0 ID=.8646;gene=rplJ;locus_tag=b3985;gene_synonym=ECK3976;gene_synonym=JW3948;function=structural component%3B Ribosomal proteins - synthesis%2C modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0003735 - structural constituent of ribosome%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=50S ribosomal subunit protein L10;protein_id=AAC76959.1;db_xref=GI:1790417;db_xref=ASAP:ABE-0013035;db_xref=UniProtKB/Swiss-Prot:P0A7J3;db_xref=EcoGene:EG10871 EMBL gene 4180560 4180925 . + . ID=.8647;gene=rplL;locus_tag=b3986;gene_synonym=ECK3977;gene_synonym=JW3949;db_xref=EcoGene:EG10873 EMBL CDS 4180560 4180925 . + 0 ID=.8648;gene=rplL;locus_tag=b3986;gene_synonym=ECK3977;gene_synonym=JW3949;function=structural component%3B Ribosomal proteins - synthesis%2C modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0003735 - structural constituent of ribosome%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=50S ribosomal subunit protein L7/L12;protein_id=AAC76960.1;db_xref=GI:1790418;db_xref=ASAP:ABE-0013038;db_xref=UniProtKB/Swiss-Prot:P0A7K2;db_xref=EcoGene:EG10873 EMBL gene 4181245 4185273 . + . ID=.8649;gene=rpoB;locus_tag=b3987;gene_synonym=ECK3978;gene_synonym=ftsR;gene_synonym=groN;gene_synonym=JW3950;gene_synonym=mbrD?;gene_synonym=nitB;gene_synonym=rif;gene_synonym=ron;gene_synonym=sdgB;gene_synonym=stl;gene_synonym=stv;gene_synonym=tabD;gene_synonym=tabG;db_xref=EcoGene:EG10894 EMBL CDS 4181245 4185273 . + 0 ID=.8650;gene=rpoB;locus_tag=b3987;gene_synonym=ECK3978;gene_synonym=ftsR;gene_synonym=groN;gene_synonym=JW3950;gene_synonym=mbrD?;gene_synonym=nitB;gene_synonym=rif;gene_synonym=ron;gene_synonym=sdgB;gene_synonym=stl;gene_synonym=stv;gene_synonym=tabD;gene_synonym=tabG;ec_number=2.7.7.6;function=enzyme%3B RNA synthesis%2C modification%2C DNA transcription;experiment=N-terminus verified by Edman degradation: PMID 1095419%2C6266829;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=RNA polymerase%2C beta subunit;protein_id=AAC76961.1;db_xref=GI:1790419;db_xref=ASAP:ABE-0013041;db_xref=UniProtKB/Swiss-Prot:P0A8V2;db_xref=EcoGene:EG10894 EMBL gene 4185350 4189573 . + . ID=.8651;gene=rpoC;locus_tag=b3988;gene_synonym=ECK3979;gene_synonym=JW3951;gene_synonym=tabB;db_xref=EcoGene:EG10895 EMBL CDS 4185350 4189573 . + 0 ID=.8652;gene=rpoC;locus_tag=b3988;gene_synonym=ECK3979;gene_synonym=JW3951;gene_synonym=tabB;ec_number=2.7.7.6;function=enzyme%3B RNA synthesis%2C modification%2C DNA transcription;experiment=N-terminus verified by Edman degradation: PMID 1095419%2C6266829%2C6287430;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=RNA polymerase%2C beta prime subunit;protein_id=AAC76962.1;db_xref=GI:2367335;db_xref=ASAP:ABE-0013043;db_xref=UniProtKB/Swiss-Prot:P0A8T7;db_xref=EcoGene:EG10895 EMBL gene 4189786 4190325 . + . ID=.8653;gene=yjaZ;locus_tag=b3989;gene_synonym=ECK3980;gene_synonym=htrC;gene_synonym=JW3952;db_xref=EcoGene:EG11429 EMBL CDS 4189786 4190325 . + 0 ID=.8654;gene=yjaZ;locus_tag=b3989;gene_synonym=ECK3980;gene_synonym=htrC;gene_synonym=JW3952;function=factor%3B Adaptations%2C atypical conditions;note=heat shock protein htrC%3B GO_process: GO:0009266 - response to temperature stimulus;codon_start=1;transl_table=11;product=stationary phase growth adaptation protein;protein_id=AAC76963.1;db_xref=GI:1790422;db_xref=ASAP:ABE-0013046;db_xref=UniProtKB/Swiss-Prot:P27375;db_xref=EcoGene:EG11429 EMBL gene 4190327 4190487 . - . ID=.8655;gene=sroH;locus_tag=b4691;gene_synonym=ECK4505;gene_synonym=IS206;db_xref=EcoGene:EG31182 EMBL ncRNA 4190327 4190487 . - . ID=.8656;ncrna_class=other;gene=sroH;locus_tag=b4691;gene_synonym=ECK4505;gene_synonym=IS206;product=novel sRNA%2C function unknown;db_xref=EcoGene:EG31182 EMBL gene 4190735 4191868 . - . ID=.8657;gene=thiH;locus_tag=b3990;gene_synonym=ECK3981;gene_synonym=JW3953;gene_synonym=thiB;db_xref=EcoGene:EG11590 EMBL CDS 4190735 4191868 . - 0 ID=.8658;gene=thiH;locus_tag=b3990;gene_synonym=ECK3981;gene_synonym=JW3953;gene_synonym=thiB;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Thiamine;note=GO_process: GO:0009228 - thiamin biosynthetic process;codon_start=1;transl_table=11;product=tyrosine lyase%2C involved in thiamine-thiazole moiety synthesis;protein_id=AAC76964.1;db_xref=GI:1790423;db_xref=ASAP:ABE-0013048;db_xref=UniProtKB/Swiss-Prot:P30140;db_xref=EcoGene:EG11590 EMBL gene 4191865 4192635 . - . ID=.8659;gene=thiG;locus_tag=b3991;gene_synonym=ECK3982;gene_synonym=JW5549;gene_synonym=thiB;db_xref=EcoGene:EG11589 EMBL CDS 4191865 4192635 . - 0 ID=.8660;gene=thiG;locus_tag=b3991;gene_synonym=ECK3982;gene_synonym=JW5549;gene_synonym=thiB;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Thiamine;note=thiamin (thiazole moiety) biosynthesis protein%3B GO_process: GO:0009228 - thiamin biosynthetic process;codon_start=1;transl_table=11;product=thiamine biosynthesis ThiGH complex subunit;protein_id=AAC76965.2;db_xref=GI:48994993;db_xref=ASAP:ABE-0013050;db_xref=UniProtKB/Swiss-Prot:P30139;db_xref=EcoGene:EG11589 EMBL gene 4192637 4192837 . - . ID=.8661;gene=thiS;locus_tag=b4407;gene_synonym=ECK3983;gene_synonym=JW3955;db_xref=EcoGene:EG14363 EMBL CDS 4192637 4192837 . - 0 ID=.8662;gene=thiS;locus_tag=b4407;gene_synonym=ECK3983;gene_synonym=JW3955;function=factor%3B Biosynthesis of cofactors%2C carriers: Thiamine;note=sulfur carrier protein;codon_start=1;transl_table=11;product=immediate sulfur donor in thiazole formation;protein_id=AAT48237.1;db_xref=GI:48994994;db_xref=ASAP:ABE-0023907;db_xref=UniProtKB/Swiss-Prot:O32583;db_xref=EcoGene:EG14363 EMBL gene 4192821 4193576 . - . ID=.8663;gene=thiF;locus_tag=b3992;gene_synonym=ECK3984;gene_synonym=JW3956;gene_synonym=thiA;db_xref=EcoGene:EG11587 EMBL CDS 4192821 4193576 . - 0 ID=.8664;gene=thiF;locus_tag=b3992;gene_synonym=ECK3984;gene_synonym=JW3956;gene_synonym=thiA;ec_number=2.7.7.-;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Thiamine;note=adenylyltransferase%3B GO_process: GO:0009228 - thiamin biosynthetic process;codon_start=1;transl_table=11;product=adenylyltransferase%2C modifies ThiS C-terminus;protein_id=AAC76966.2;db_xref=GI:87082356;db_xref=ASAP:ABE-0013053;db_xref=UniProtKB/Swiss-Prot:P30138;db_xref=EcoGene:EG11587 EMBL gene 4193569 4194204 . - . ID=.8665;gene=thiE;locus_tag=b3993;gene_synonym=ECK3985;gene_synonym=JW3957;gene_synonym=thiA;db_xref=EcoGene:EG11586 EMBL CDS 4193569 4194204 . - 0 ID=.8666;gene=thiE;locus_tag=b3993;gene_synonym=ECK3985;gene_synonym=JW3957;gene_synonym=thiA;ec_number=2.5.1.3;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Thiamine;note=thiamin-phosphate synthase (thiamine-phosphate pyrophosphorylase)%3B GO_process: GO:0009228 - thiamin biosynthetic process;codon_start=1;transl_table=11;product=thiamine phosphate synthase (thiamine phosphate pyrophosphorylase);protein_id=AAC76967.1;db_xref=GI:1790426;db_xref=ASAP:ABE-0013055;db_xref=UniProtKB/Swiss-Prot:P30137;db_xref=EcoGene:EG11586 EMBL gene 4194204 4196099 . - . ID=.8667;gene=thiC;locus_tag=b3994;gene_synonym=ECK3986;gene_synonym=JW3958;db_xref=EcoGene:EG11585 EMBL CDS 4194204 4196099 . - 0 ID=.8668;gene=thiC;locus_tag=b3994;gene_synonym=ECK3986;gene_synonym=JW3958;ec_number=4.1.99.17;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Thiamine;note=GO_process: GO:0009228 - thiamin biosynthetic process;codon_start=1;transl_table=11;product=phosphomethylpyrimidine synthase;protein_id=AAC76968.1;db_xref=GI:1790427;db_xref=ASAP:ABE-0013057;db_xref=UniProtKB/Swiss-Prot:P30136;db_xref=EcoGene:EG11585 EMBL gene 4196332 4196808 . - . ID=.8669;gene=rsd;locus_tag=b3995;gene_synonym=ECK3987;gene_synonym=JW3959;gene_synonym=yjaE;db_xref=EcoGene:EG11738 EMBL CDS 4196332 4196808 . - 0 ID=.8670;gene=rsd;locus_tag=b3995;gene_synonym=ECK3987;gene_synonym=JW3959;gene_synonym=yjaE;function=regulator%3B Not classified;experiment=N-terminus verified by Edman degradation: PMID 9560209;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=stationary phase protein%2C binds sigma 70 RNA polymerase subunit;protein_id=AAC76969.1;db_xref=GI:1790428;db_xref=ASAP:ABE-0013059;db_xref=UniProtKB/Swiss-Prot:P0AFX4;db_xref=EcoGene:EG11738 EMBL gene 4196903 4197676 . + . ID=.8671;gene=nudC;locus_tag=b3996;gene_synonym=ECK3988;gene_synonym=JW5548;gene_synonym=yjaD;db_xref=EcoGene:EG11702 EMBL CDS 4196903 4197676 . + 0 ID=.8672;gene=nudC;locus_tag=b3996;gene_synonym=ECK3988;gene_synonym=JW5548;gene_synonym=yjaD;codon_start=1;transl_table=11;product=NADH pyrophosphatase;protein_id=AAT48238.1;db_xref=GI:48994995;db_xref=ASAP:ABE-0013063;db_xref=UniProtKB/Swiss-Prot:P32664;db_xref=EcoGene:EG11702 EMBL gene 4197716 4198780 . + . ID=.8673;gene=hemE;locus_tag=b3997;gene_synonym=ECK3989;gene_synonym=hemC;gene_synonym=JW3961;db_xref=EcoGene:EG11543 EMBL CDS 4197716 4198780 . + 0 ID=.8674;gene=hemE;locus_tag=b3997;gene_synonym=ECK3989;gene_synonym=hemC;gene_synonym=JW3961;ec_number=4.1.1.37;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Heme%2C porphyrin;codon_start=1;transl_table=11;product=uroporphyrinogen decarboxylase;protein_id=AAC76971.1;db_xref=GI:2367337;db_xref=ASAP:ABE-0013066;db_xref=UniProtKB/Swiss-Prot:P29680;db_xref=EcoGene:EG11543 EMBL gene 4198790 4199461 . + . ID=.8675;gene=nfi;locus_tag=b3998;gene_synonym=ECK3990;gene_synonym=JW5547;gene_synonym=yjaF;db_xref=EcoGene:EG11915 EMBL CDS 4198790 4199461 . + 0 ID=.8676;gene=nfi;locus_tag=b3998;gene_synonym=ECK3990;gene_synonym=JW5547;gene_synonym=yjaF;ec_number=3.1.21.7;function=enzyme%3B Degradation of DNA;experiment=N-terminus verified by Edman degradation: PMID 8990280;note=endonuclease V (deoxyinosine 3'endoduclease)%3B GO_process: GO:0006308 - DNA catabolic process;codon_start=1;transl_table=11;product=endonuclease V%3B deoxyinosine 3' endonuclease;protein_id=AAC76972.2;db_xref=GI:87082357;db_xref=ASAP:ABE-0013068;db_xref=UniProtKB/Swiss-Prot:P68739;db_xref=EcoGene:EG11915 EMBL gene 4199504 4200094 . + . ID=.8677;gene=yjaG;locus_tag=b3999;gene_synonym=ECK3991;gene_synonym=JW3963;db_xref=EcoGene:EG11916 EMBL CDS 4199504 4200094 . + 0 ID=.8678;gene=yjaG;locus_tag=b3999;gene_synonym=ECK3991;gene_synonym=JW3963;codon_start=1;transl_table=11;product=DUF416 domain protein;protein_id=AAC76973.1;db_xref=GI:1790432;db_xref=ASAP:ABE-0013070;db_xref=UniProtKB/Swiss-Prot:P32680;db_xref=EcoGene:EG11916 EMBL gene 4200281 4200553 . + . ID=.8679;gene=hupA;locus_tag=b4000;gene_synonym=ECK3992;gene_synonym=JW3964;db_xref=EcoGene:EG10466 EMBL CDS 4200281 4200553 . + 0 ID=.8680;gene=hupA;locus_tag=b4000;gene_synonym=ECK3992;gene_synonym=JW3964;function=factor%3B Basic proteins - synthesis%2C modification;experiment=N-terminus verified by Edman degradation: PMID 350619%2C6987059%2C9298646;note=DNA-binding protein HU-alpha (HU-2)%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=HU%2C DNA-binding transcriptional regulator%2C alpha subunit;protein_id=AAC76974.1;db_xref=GI:1790433;db_xref=ASAP:ABE-0013077;db_xref=UniProtKB/Swiss-Prot:P0ACF0;db_xref=EcoGene:EG10466 EMBL gene 4200566 4201261 . + . ID=.8681;gene=yjaH;locus_tag=b4001;gene_synonym=ECK3993;gene_synonym=JW3965;db_xref=EcoGene:EG11917 EMBL CDS 4200566 4201261 . + 0 ID=.8682;gene=yjaH;locus_tag=b4001;gene_synonym=ECK3993;gene_synonym=JW3965;codon_start=1;transl_table=11;product=DUF1481 family putative lipoprotein;protein_id=AAC76975.1;db_xref=GI:1790434;db_xref=ASAP:ABE-0013079;db_xref=UniProtKB/Swiss-Prot:P32681;db_xref=EcoGene:EG11917 EMBL gene 4201263 4201688 . - . ID=.8683;gene=zraP;locus_tag=b4002;gene_synonym=ECK3994;gene_synonym=JW5546;gene_synonym=yjaI;gene_synonym=zra;db_xref=EcoGene:EG11918 EMBL CDS 4201263 4201688 . - 0 ID=.8684;gene=zraP;locus_tag=b4002;gene_synonym=ECK3994;gene_synonym=JW5546;gene_synonym=yjaI;gene_synonym=zra;note=GO_component: GO:0042597 - periplasmic space;codon_start=1;transl_table=11;product=Zn-dependent periplasmic chaperone;protein_id=AAC76976.2;db_xref=GI:87082358;db_xref=ASAP:ABE-0013081;db_xref=UniProtKB/Swiss-Prot:P0AAA9;db_xref=EcoGene:EG11918 EMBL gene 4201926 4203323 . + . ID=.8685;gene=zraS;locus_tag=b4003;gene_synonym=ECK3995;gene_synonym=hydH;gene_synonym=JW3967;db_xref=EcoGene:EG10008 EMBL CDS 4201926 4203323 . + 0 ID=.8686;gene=zraS;locus_tag=b4003;gene_synonym=ECK3995;gene_synonym=hydH;gene_synonym=JW3967;function=enzyme%3B Energy metabolism%2C carbon: Fermentation;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006113 - fermentation%3B GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=sensory histidine kinase in two-component regulatory system with ZraR;protein_id=AAC76977.1;db_xref=GI:1790436;db_xref=ASAP:ABE-0013088;db_xref=UniProtKB/Swiss-Prot:P14377;db_xref=EcoGene:EG10008 EMBL gene 4203320 4204645 . + . ID=.8687;gene=zraR;locus_tag=b4004;gene_synonym=ECK3996;gene_synonym=hydG;gene_synonym=JW3968;db_xref=EcoGene:EG10482 EMBL CDS 4203320 4204645 . + 0 ID=.8688;gene=zraR;locus_tag=b4004;gene_synonym=ECK3996;gene_synonym=hydG;gene_synonym=JW3968;function=regulator%3B Energy metabolism%2C carbon: Fermentation;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0006113 - fermentation%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein;protein_id=AAC76978.1;db_xref=GI:1790437;db_xref=ASAP:ABE-0013093;db_xref=UniProtKB/Swiss-Prot:P14375;db_xref=EcoGene:EG10482 EMBL gene 4204642 4205931 . - . ID=.8689;gene=purD;locus_tag=b4005;gene_synonym=adth;gene_synonym=ECK3997;gene_synonym=JW3969;db_xref=EcoGene:EG10792 EMBL CDS 4204642 4205931 . - 0 ID=.8690;gene=purD;locus_tag=b4005;gene_synonym=adth;gene_synonym=ECK3997;gene_synonym=JW3969;ec_number=6.3.4.13;function=enzyme%3B Purine ribonucleotide biosynthesis;note=phosphoribosylglycinamide synthetase %3D GAR synthetase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006164 - purine nucleotide biosynthetic process;codon_start=1;transl_table=11;product=phosphoribosylglycinamide synthetase phosphoribosylamine-glycine ligase;protein_id=AAC76979.1;db_xref=GI:1790438;db_xref=ASAP:ABE-0013095;db_xref=UniProtKB/Swiss-Prot:P15640;db_xref=EcoGene:EG10792 EMBL gene 4205943 4207532 . - . ID=.8691;gene=purH;locus_tag=b4006;gene_synonym=ECK3998;gene_synonym=JW3970;db_xref=EcoGene:EG10795 EMBL CDS 4205943 4207532 . - 0 ID=.8692;gene=purH;locus_tag=b4006;gene_synonym=ECK3998;gene_synonym=JW3970;ec_number=2.1.2.3;ec_number=3.5.4.10;function=enzyme%3B Purine ribonucleotide biosynthesis;experiment=N-terminus verified by Edman degradation: PMID 9298646;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006164 - purine nucleotide biosynthetic process%3B GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion;codon_start=1;transl_table=11;product=IMP cyclohydrolase and phosphoribosylaminoimidazolecarboxamide formyltransferase;protein_id=AAC76980.1;db_xref=GI:1790439;db_xref=ASAP:ABE-0013097;db_xref=UniProtKB/Swiss-Prot:P15639;db_xref=EcoGene:EG10795 EMBL gene 4208147 4209688 . + . ID=.8693;gene=rrsE;locus_tag=b4007;gene_synonym=ECK3999;gene_synonym=JWR0107;db_xref=EcoGene:EG30088 EMBL rRNA 4208147 4209688 . + . ID=.8694;gene=rrsE;locus_tag=b4007;gene_synonym=ECK3999;gene_synonym=JWR0107;product=16S ribosomal RNA of rrnE operon;db_xref=ASAP:ABE-0013103;db_xref=EcoGene:EG30088 EMBL gene 4209774 4209849 . + . ID=.8695;gene=gltV;locus_tag=b4008;gene_synonym=ECK4000;gene_synonym=JWR0108;gene_synonym=tgtE;db_xref=EcoGene:EG30034 EMBL tRNA 4209774 4209849 . + . ID=.8696;gene=gltV;locus_tag=b4008;gene_synonym=ECK4000;gene_synonym=JWR0108;gene_synonym=tgtE;product=tRNA-Glu;note=anticodon: UUC;db_xref=ASAP:ABE-0013105;db_xref=EcoGene:EG30034 EMBL gene 4210043 4212946 . + . ID=.8697;gene=rrlE;locus_tag=b4009;gene_synonym=ECK4001;gene_synonym=JWR0109;db_xref=EcoGene:EG30081 EMBL rRNA 4210043 4212946 . + . ID=.8698;gene=rrlE;locus_tag=b4009;gene_synonym=ECK4001;gene_synonym=JWR0109;product=23S ribosomal RNA of rrnE operon;db_xref=ASAP:ABE-0013107;db_xref=EcoGene:EG30081 EMBL gene 4213040 4213159 . + . ID=.8699;gene=rrfE;locus_tag=b4010;gene_synonym=ECK4002;gene_synonym=JWR0110;db_xref=EcoGene:EG30074 EMBL rRNA 4213040 4213159 . + . ID=.8700;gene=rrfE;locus_tag=b4010;gene_synonym=ECK4002;gene_synonym=JWR0110;product=5S ribosomal RNA of rrnE operon;db_xref=ASAP:ABE-0013109;db_xref=EcoGene:EG30074 EMBL gene 4213234 4213617 . + . ID=.8701;gene=yjaA;locus_tag=b4011;gene_synonym=ECK4003;gene_synonym=JW3971;db_xref=EcoGene:EG11206 EMBL CDS 4213234 4213617 . + 0 ID=.8702;gene=yjaA;locus_tag=b4011;gene_synonym=ECK4003;gene_synonym=JW3971;codon_start=1;transl_table=11;product=stress-induced protein;protein_id=AAC76981.1;db_xref=GI:1790441;db_xref=ASAP:ABE-0013112;db_xref=UniProtKB/Swiss-Prot:P09162;db_xref=EcoGene:EG11206 EMBL gene 4213680 4214123 . - . ID=.8703;gene=yjaB;locus_tag=b4012;gene_synonym=ECK4004;gene_synonym=JW3972;db_xref=EcoGene:EG11207 EMBL CDS 4213680 4214123 . - 0 ID=.8704;gene=yjaB;locus_tag=b4012;gene_synonym=ECK4004;gene_synonym=JW3972;codon_start=1;transl_table=11;product=GNAT-family putative N-acetyltransferase%3B acetyl coenzyme A-binding protein;protein_id=AAC76982.1;db_xref=GI:1790442;db_xref=ASAP:ABE-0013114;db_xref=UniProtKB/Swiss-Prot:P09163;db_xref=EcoGene:EG11207 EMBL gene 4214280 4215209 . + . ID=.8705;gene=metA;locus_tag=b4013;gene_synonym=ECK4005;gene_synonym=JW3973;db_xref=EcoGene:EG10581 EMBL CDS 4214280 4215209 . + 0 ID=.8706;gene=metA;locus_tag=b4013;gene_synonym=ECK4005;gene_synonym=JW3973;ec_number=2.3.1.46;function=enzyme%3B Amino acid biosynthesis: Methionine;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009086 - methionine biosynthetic process;codon_start=1;transl_table=11;product=homoserine O-transsuccinylase;protein_id=AAC76983.1;db_xref=GI:1790443;db_xref=ASAP:ABE-0013121;db_xref=UniProtKB/Swiss-Prot:P07623;db_xref=EcoGene:EG10581 EMBL gene 4215478 4217079 . + . ID=.8707;gene=aceB;locus_tag=b4014;gene_synonym=ECK4006;gene_synonym=JW3974;gene_synonym=mas;db_xref=EcoGene:EG10023 EMBL CDS 4215478 4217079 . + 0 ID=.8708;gene=aceB;locus_tag=b4014;gene_synonym=ECK4006;gene_synonym=JW3974;gene_synonym=mas;ec_number=2.3.3.9;function=enzyme%3B Central intermediary metabolism: Glyoxylate bypass;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006097 - glyoxylate cycle;codon_start=1;transl_table=11;product=malate synthase A;protein_id=AAC76984.1;db_xref=GI:1790444;db_xref=ASAP:ABE-0013125;db_xref=UniProtKB/Swiss-Prot:P08997;db_xref=EcoGene:EG10023 EMBL gene 4217109 4218413 . + . ID=.8709;gene=aceA;locus_tag=b4015;gene_synonym=ECK4007;gene_synonym=icl;gene_synonym=JW3975;db_xref=EcoGene:EG10022 EMBL CDS 4217109 4218413 . + 0 ID=.8710;gene=aceA;locus_tag=b4015;gene_synonym=ECK4007;gene_synonym=icl;gene_synonym=JW3975;ec_number=4.1.3.1;function=enzyme%3B Central intermediary metabolism: Glyoxylate bypass;experiment=N-terminus verified by Edman degradation: PMID 3049537%2C10094700;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006097 - glyoxylate cycle;codon_start=1;transl_table=11;product=isocitrate lyase;protein_id=AAC76985.1;db_xref=GI:1790445;db_xref=ASAP:ABE-0013128;db_xref=UniProtKB/Swiss-Prot:P0A9G6;db_xref=EcoGene:EG10022 EMBL repeat_region 4218436 4218567 . + . ID=.8711;note=REP311 (repetitive extragenic palindromic) element%3B contains 3 REP sequences EMBL gene 4218596 4220332 . + . ID=.8712;gene=aceK;locus_tag=b4016;gene_synonym=ECK4008;gene_synonym=JW3976;db_xref=EcoGene:EG10026 EMBL CDS 4218596 4220332 . + 0 ID=.8713;gene=aceK;locus_tag=b4016;gene_synonym=ECK4008;gene_synonym=JW3976;ec_number=2.7.11.5;function=enzyme%3B Central intermediary metabolism: Glyoxylate bypass;note=GO_process: GO:0006097 - glyoxylate cycle%3B GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=isocitrate dehydrogenase kinase/phosphatase;protein_id=AAC76986.1;db_xref=GI:1790446;db_xref=ASAP:ABE-0013131;db_xref=UniProtKB/Swiss-Prot:P11071;db_xref=EcoGene:EG10026 EMBL gene 4220301 4222487 . - . ID=.8714;gene=arpA;locus_tag=b4017;gene_synonym=ECK4009;gene_synonym=JW3977;gene_synonym=yjaC;db_xref=EcoGene:EG11208 EMBL CDS 4220301 4222487 . - 0 ID=.8715;gene=arpA;locus_tag=b4017;gene_synonym=ECK4009;gene_synonym=JW3977;gene_synonym=yjaC;note=GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=ankyrin repeat protein;protein_id=AAC76987.1;db_xref=GI:1790447;db_xref=ASAP:ABE-0013133;db_xref=UniProtKB/Swiss-Prot:P23325;db_xref=EcoGene:EG11208 EMBL gene 4222804 4223628 . - . ID=.8716;gene=iclR;locus_tag=b4018;gene_synonym=ECK4010;gene_synonym=JW3978;db_xref=EcoGene:EG10491 EMBL CDS 4222804 4223628 . - 0 ID=.8717;gene=iclR;locus_tag=b4018;gene_synonym=ECK4010;gene_synonym=JW3978;function=regulator%3B Central intermediary metabolism: Glyoxylate bypass;note=repressor of aceBA operon%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006097 - glyoxylate cycle%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=transcriptional repressor;protein_id=AAC76988.2;db_xref=GI:87082359;db_xref=ASAP:ABE-0013136;db_xref=UniProtKB/Swiss-Prot:P16528;db_xref=EcoGene:EG10491 EMBL gene 4223828 4227511 . + . ID=.8718;gene=metH;locus_tag=b4019;gene_synonym=ECK4011;gene_synonym=JW3979;db_xref=EcoGene:EG10587 EMBL CDS 4223828 4227511 . + 0 ID=.8719;gene=metH;locus_tag=b4019;gene_synonym=ECK4011;gene_synonym=JW3979;ec_number=2.1.1.13;function=enzyme%3B Amino acid biosynthesis: Methionine;note=B12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase%2C repressor of metE and metF%3B GO_process: GO:0009086 - methionine biosynthetic process%3B GO_process: GO:0006556 - S-adenosylmethionine biosynthetic process;codon_start=1;transl_table=11;product=homocysteine-N5-methyltetrahydrofolate transmethylase%2C B12-dependent;protein_id=AAC76989.1;db_xref=GI:1790450;db_xref=ASAP:ABE-0013140;db_xref=UniProtKB/Swiss-Prot:P13009;db_xref=EcoGene:EG10587 EMBL gene 4227731 4229362 . + . ID=.8720;gene=yjbB;locus_tag=b4020;gene_synonym=ECK4012;gene_synonym=JW3980;db_xref=EcoGene:EG11919 EMBL CDS 4227731 4229362 . + 0 ID=.8721;gene=yjbB;locus_tag=b4020;gene_synonym=ECK4012;gene_synonym=JW3980;function=phenotype%3B Not classified;note=putative alpha helix protein;codon_start=1;transl_table=11;product=putative Na+/Pi-cotransporter;protein_id=AAC76990.1;db_xref=GI:1790451;db_xref=ASAP:ABE-0013143;db_xref=UniProtKB/Swiss-Prot:P0AF43;db_xref=EcoGene:EG11919 EMBL repeat_region 4229376 4229445 . + . ID=.8722;note=REP312 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 4229453 4230142 . - . ID=.8723;gene=pepE;locus_tag=b4021;gene_synonym=ECK4013;gene_synonym=JW3981;db_xref=EcoGene:EG11920 EMBL CDS 4229453 4230142 . - 0 ID=.8724;gene=pepE;locus_tag=b4021;gene_synonym=ECK4013;gene_synonym=JW3981;ec_number=3.4.13.21;function=enzyme%3B Degradation of proteins%2C peptides%2C glyco;note=peptidase E%2C a dipeptidase where amino-terminal residue is aspartate;codon_start=1;transl_table=11;product=peptidase E%2C alpha-aspartyl dipeptidase;protein_id=AAC76991.1;db_xref=GI:1790452;db_xref=ASAP:ABE-0013146;db_xref=UniProtKB/Swiss-Prot:P0A7C6;db_xref=EcoGene:EG11920 EMBL gene 4230354 4231226 . + . ID=.8725;gene=rluF;locus_tag=b4022;gene_synonym=ECK4014;gene_synonym=JW3982;gene_synonym=yjbC;db_xref=EcoGene:EG11921 EMBL CDS 4230354 4231226 . + 0 ID=.8726;gene=rluF;locus_tag=b4022;gene_synonym=ECK4014;gene_synonym=JW3982;gene_synonym=yjbC;ec_number=4.2.1.70;function=enzyme%3B rRNA modification;codon_start=1;transl_table=11;product=23S rRNA pseudouridine(2604) synthase;protein_id=AAC76992.1;db_xref=GI:1790453;db_xref=ASAP:ABE-0013150;db_xref=UniProtKB/Swiss-Prot:P32684;db_xref=EcoGene:EG11921 EMBL gene 4231359 4231631 . - . ID=.8727;gene=yjbD;locus_tag=b4023;gene_synonym=ECK4015;gene_synonym=JW3983;db_xref=EcoGene:EG11922 EMBL CDS 4231359 4231631 . - 0 ID=.8728;gene=yjbD;locus_tag=b4023;gene_synonym=ECK4015;gene_synonym=JW3983;codon_start=1;transl_table=11;product=DUF3811 family protein;protein_id=AAC76993.1;db_xref=GI:1790454;db_xref=ASAP:ABE-0013153;db_xref=UniProtKB/Swiss-Prot:P32685;db_xref=EcoGene:EG11922 EMBL gene 4231884 4233233 . - . ID=.8729;gene=lysC;locus_tag=b4024;gene_synonym=apk;gene_synonym=ECK4016;gene_synonym=JW3984;db_xref=EcoGene:EG10550 EMBL CDS 4231884 4233233 . - 0 ID=.8730;gene=lysC;locus_tag=b4024;gene_synonym=apk;gene_synonym=ECK4016;gene_synonym=JW3984;ec_number=2.7.2.4;function=enzyme%3B Amino acid biosynthesis: Lysine;note=aspartokinase III%2C lysine sensitive%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009089 - lysine biosynthetic process via diaminopimelate%3B GO_process: GO:0009090 - homoserine biosynthetic process;codon_start=1;transl_table=11;product=lysine-sensitive aspartokinase 3;protein_id=AAC76994.1;db_xref=GI:1790455;db_xref=ASAP:ABE-0013156;db_xref=UniProtKB/Swiss-Prot:P08660;db_xref=EcoGene:EG10550 EMBL gene 4233758 4235407 . + . ID=.8731;gene=pgi;locus_tag=b4025;gene_synonym=ECK4017;gene_synonym=JW3985;db_xref=EcoGene:EG10702 EMBL CDS 4233758 4235407 . + 0 ID=.8732;gene=pgi;locus_tag=b4025;gene_synonym=ECK4017;gene_synonym=JW3985;ec_number=5.3.1.9;function=enzyme%3B Energy metabolism%2C carbon: Glycolysis;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006096 - glycolysis%3B GO_process: GO:0006094 - gluconeogenesis;codon_start=1;transl_table=11;product=glucosephosphate isomerase;protein_id=AAC76995.1;db_xref=GI:1790457;db_xref=ASAP:ABE-0013163;db_xref=UniProtKB/Swiss-Prot:P0A6T1;db_xref=EcoGene:EG10702 EMBL repeat_region 4235421 4235497 . + . ID=.8733;note=REP313 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 4235906 4236148 . + . ID=.8734;gene=yjbE;locus_tag=b4026;gene_synonym=ECK4018;gene_synonym=JW3986;db_xref=EcoGene:EG11923 EMBL CDS 4235906 4236148 . + 0 ID=.8735;gene=yjbE;locus_tag=b4026;gene_synonym=ECK4018;gene_synonym=JW3986;codon_start=1;transl_table=11;product=extracellular polysaccharide production threonine-rich protein;protein_id=AAC76996.1;db_xref=GI:1790458;db_xref=ASAP:ABE-0013168;db_xref=UniProtKB/Swiss-Prot:P0AF45;db_xref=EcoGene:EG11923 EMBL gene 4236262 4236900 . + . ID=.8736;gene=yjbF;locus_tag=b4027;gene_synonym=ECK4019;gene_synonym=JW5711;db_xref=EcoGene:EG11924 EMBL CDS 4236262 4236900 . + 0 ID=.8737;gene=yjbF;locus_tag=b4027;gene_synonym=ECK4019;gene_synonym=JW5711;note=GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=extracellular polysaccharide production lipoprotein;protein_id=AAC76997.2;db_xref=GI:87082360;db_xref=ASAP:ABE-0013172;db_xref=UniProtKB/Swiss-Prot:P32687;db_xref=EcoGene:EG11924 EMBL gene 4236897 4237634 . + . ID=.8738;gene=yjbG;locus_tag=b4028;gene_synonym=ECK4020;gene_synonym=JW3988;db_xref=EcoGene:EG11925 EMBL CDS 4236897 4237634 . + 0 ID=.8739;gene=yjbG;locus_tag=b4028;gene_synonym=ECK4020;gene_synonym=JW3988;codon_start=1;transl_table=11;product=extracellular polysaccharide export OMA protein;protein_id=AAC76998.1;db_xref=GI:1790460;db_xref=ASAP:ABE-0013174;db_xref=UniProtKB/Swiss-Prot:P32688;db_xref=EcoGene:EG11925 EMBL gene 4237634 4239730 . + . ID=.8740;gene=yjbH;locus_tag=b4029;gene_synonym=ECK4021;gene_synonym=JW3989;db_xref=EcoGene:EG11926 EMBL CDS 4237634 4239730 . + 0 ID=.8741;gene=yjbH;locus_tag=b4029;gene_synonym=ECK4021;gene_synonym=JW3989;codon_start=1;transl_table=11;product=DUF940 family extracellular polysaccharide protein;protein_id=AAC76999.1;db_xref=GI:1790461;db_xref=ASAP:ABE-0013176;db_xref=UniProtKB/Swiss-Prot:P32689;db_xref=EcoGene:EG11926 EMBL gene 4239777 4240055 . - . ID=.8742;gene=yjbT;locus_tag=b4620;gene_synonym=ECK4428;db_xref=EcoGene:EG14459 EMBL CDS 4239777 4240055 . - 0 ID=.8743;gene=yjbT;locus_tag=b4620;gene_synonym=ECK4428;codon_start=1;transl_table=11;product=putative periplasmic protein;protein_id=ABP93457.1;db_xref=GI:145693210;db_xref=UniProtKB/Swiss-Prot:A5A628;db_xref=EcoGene:EG14459 EMBL repeat_region 4240157 4240193 . + . ID=.8744;note=REP314 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 4240325 4240735 . + . ID=.8745;gene=psiE;locus_tag=b4030;gene_synonym=ECK4022;gene_synonym=JW3990;gene_synonym=yjbA;db_xref=EcoGene:EG11209 EMBL CDS 4240325 4240735 . + 0 ID=.8746;gene=psiE;locus_tag=b4030;gene_synonym=ECK4022;gene_synonym=JW3990;gene_synonym=yjbA;codon_start=1;transl_table=11;product=phosphate starvation inducible protein;protein_id=AAC77000.1;db_xref=GI:1790462;db_xref=ASAP:ABE-0013187;db_xref=UniProtKB/Swiss-Prot:P0A7C8;db_xref=EcoGene:EG11209 EMBL gene 4240779 4242254 . - . ID=.8747;gene=xylE;locus_tag=b4031;gene_synonym=ECK4023;gene_synonym=JW3991;db_xref=EcoGene:EG11076 EMBL CDS 4240779 4242254 . - 0 ID=.8748;gene=xylE;locus_tag=b4031;gene_synonym=ECK4023;gene_synonym=JW3991;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=xylose-proton symport%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0015753 - D-xylose transport;codon_start=1;transl_table=11;product=D-xylose transporter;protein_id=AAC77001.1;db_xref=GI:1790463;db_xref=ASAP:ABE-0013189;db_xref=UniProtKB/Swiss-Prot:P0AGF4;db_xref=EcoGene:EG11076 EMBL gene 4242626 4243516 . - . ID=.8749;gene=malG;locus_tag=b4032;gene_synonym=ECK4024;gene_synonym=JW3992;gene_synonym=malJ;db_xref=EcoGene:EG10556 EMBL CDS 4242626 4243516 . - 0 ID=.8750;gene=malG;locus_tag=b4032;gene_synonym=ECK4024;gene_synonym=JW3992;gene_synonym=malJ;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=part of maltose permease%2C inner membrane%3B membrane component of ABC superfamily%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=maltose transporter subunit;protein_id=AAC77002.1;db_xref=GI:1790464;db_xref=ASAP:ABE-0013193;db_xref=UniProtKB/Swiss-Prot:P68183;db_xref=EcoGene:EG10556 EMBL gene 4243531 4245075 . - . ID=.8751;gene=malF;locus_tag=b4033;gene_synonym=ECK4025;gene_synonym=JW3993;gene_synonym=malJ;db_xref=EcoGene:EG10555 EMBL CDS 4243531 4245075 . - 0 ID=.8752;gene=malF;locus_tag=b4033;gene_synonym=ECK4025;gene_synonym=JW3993;gene_synonym=malJ;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=part of maltose permease%2C periplasmic%3B membrane component of ABC superfamily%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=maltose transporter subunit;protein_id=AAC77003.1;db_xref=GI:1790465;db_xref=ASAP:ABE-0013195;db_xref=UniProtKB/Swiss-Prot:P02916;db_xref=EcoGene:EG10555 EMBL repeat_region 4245092 4245217 . + . ID=.8753;note=REP315 (repetitive extragenic palindromic) element%3B contains 3 REP sequences EMBL gene 4245229 4246419 . - . ID=.8754;gene=malE;locus_tag=b4034;gene_synonym=ECK4026;gene_synonym=JW3994;gene_synonym=malJ;db_xref=EcoGene:EG10554 EMBL CDS 4245229 4246419 . - 0 ID=.8755;gene=malE;locus_tag=b4034;gene_synonym=ECK4026;gene_synonym=JW3994;gene_synonym=malJ;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=periplasmic maltose-binding protein%3B substrate recognition for transport and chemotaxis%3B periplasmic-binding component of ABC superfamily%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=maltose transporter subunit;protein_id=AAC77004.1;db_xref=GI:1790466;db_xref=ASAP:ABE-0013200;db_xref=UniProtKB/Swiss-Prot:P0AEX9;db_xref=EcoGene:EG10554 EMBL gene 4246784 4247899 . + . ID=.8756;gene=malK;locus_tag=b4035;gene_synonym=ECK4027;gene_synonym=JW3995;db_xref=EcoGene:EG10558 EMBL CDS 4246784 4247899 . + 0 ID=.8757;gene=malK;locus_tag=b4035;gene_synonym=ECK4027;gene_synonym=JW3995;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=ATP-binding component of transport system for maltose%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=maltose ABC transportor ATPase;protein_id=AAC77005.1;db_xref=GI:1790467;db_xref=ASAP:ABE-0013216;db_xref=UniProtKB/Swiss-Prot:P68187;db_xref=EcoGene:EG10558 EMBL gene 4247971 4249311 . + . ID=.8758;gene=lamB;locus_tag=b4036;gene_synonym=ECK4028;gene_synonym=JW3996;gene_synonym=malB;gene_synonym=malL;db_xref=EcoGene:EG10528 EMBL CDS 4247971 4249311 . + 0 ID=.8759;gene=lamB;locus_tag=b4036;gene_synonym=ECK4028;gene_synonym=JW3996;gene_synonym=malB;gene_synonym=malL;function=IS%2C phage%2C Tn%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=phage lambda receptor protein%3B maltose high-affinity receptor%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane;codon_start=1;transl_table=11;product=maltose outer membrane porin (maltoporin);protein_id=AAC77006.1;db_xref=GI:1790469;db_xref=ASAP:ABE-0013218;db_xref=UniProtKB/Swiss-Prot:P02943;db_xref=EcoGene:EG10528 EMBL repeat_region 4249321 4249445 . + . ID=.8760;note=REP316 (repetitive extragenic palindromic) element%3B contains 3 REP sequences EMBL gene 4249554 4250474 . + . ID=.8761;gene=malM;locus_tag=b4037;gene_synonym=ECK4029;gene_synonym=JW3997;gene_synonym=molA;db_xref=EcoGene:EG10559 EMBL CDS 4249554 4250474 . + 0 ID=.8762;gene=malM;locus_tag=b4037;gene_synonym=ECK4029;gene_synonym=JW3997;gene_synonym=molA;function=phenotype%3B Degradation of small molecules: Carbon compounds;note=periplasmic protein of mal regulon%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=maltose regulon periplasmic protein;protein_id=AAC77007.1;db_xref=GI:1790470;db_xref=ASAP:ABE-0013221;db_xref=UniProtKB/Swiss-Prot:P03841;db_xref=EcoGene:EG10559 EMBL gene 4250703 4252283 . + . ID=.8763;gene=yjbI;locus_tag=b4038;gene_synonym=ECK4030;gene_synonym=JW3998;pseudo=true;db_xref=EcoGene:EG11927 EMBL biological_region 4250703 4252283 . + 0 ID=.8764;featflags=type:CDS;gene=yjbI;locus_tag=b4038;gene_synonym=ECK4030;gene_synonym=JW3998;note=pseudogene%2C SopA-related%2C pentapeptide repeats-containing;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0013224;db_xref=UniProtKB/Swiss-Prot:P32690;db_xref=EcoGene:EG11927 EMBL CDS 4250703 4250885 . + 0 Parent=.8764 EMBL CDS 4250885 4250959 . + 0 Parent=.8764 EMBL CDS 4250961 4252283 . + 0 Parent=.8764 EMBL gene 4252506 4253003 . + . ID=.8768;gene=ubiC;locus_tag=b4039;gene_synonym=ECK4031;gene_synonym=JW5713;gene_synonym=sdgG?;db_xref=EcoGene:EG11369 EMBL CDS 4252506 4253003 . + 0 ID=.8769;gene=ubiC;locus_tag=b4039;gene_synonym=ECK4031;gene_synonym=JW5713;gene_synonym=sdgG?;ec_number=4.1.3.-;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Menaquinone%2C ubiquinone;note=chorismate lyase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009060 - aerobic respiration;codon_start=1;transl_table=11;product=chorismate--pyruvate lyase;protein_id=AAC77009.2;db_xref=GI:87082361;db_xref=ASAP:ABE-0013227;db_xref=UniProtKB/Swiss-Prot:P26602;db_xref=EcoGene:EG11369 EMBL gene 4253016 4253888 . + . ID=.8770;gene=ubiA;locus_tag=b4040;gene_synonym=cyr;gene_synonym=ECK4032;gene_synonym=JW4000;gene_synonym=sdgG?;db_xref=EcoGene:EG11370 EMBL CDS 4253016 4253888 . + 0 ID=.8771;gene=ubiA;locus_tag=b4040;gene_synonym=cyr;gene_synonym=ECK4032;gene_synonym=JW4000;gene_synonym=sdgG?;ec_number=2.5.1.-;function=enzyme%3B Biosynthesis of cofactors%2C carriers: Menaquinone%2C ubiquinone;note=4-hydroxybenzoate-octaprenyltransferase%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009060 - aerobic respiration;codon_start=1;transl_table=11;product=p-hydroxybenzoate octaprenyltransferase;protein_id=AAC77010.1;db_xref=GI:1790473;db_xref=ASAP:ABE-0013229;db_xref=UniProtKB/Swiss-Prot:P0AGK1;db_xref=EcoGene:EG11370 EMBL repeat_region 4253901 4254030 . + . ID=.8772;note=RIP317 (repetitive extragenic palindromic) element%3B contains 3 REP sequences and 1 IHF site EMBL gene 4254043 4256466 . - . ID=.8773;gene=plsB;locus_tag=b4041;gene_synonym=ECK4033;gene_synonym=JW4001;db_xref=EcoGene:EG10740 EMBL CDS 4254043 4256466 . - 0 ID=.8774;gene=plsB;locus_tag=b4041;gene_synonym=ECK4033;gene_synonym=JW4001;ec_number=2.3.1.15;function=enzyme%3B Macromolecule synthesis%2C modification: Phospholipids;note=glycerol-3-phosphate acyltransferase%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0008654 - phospholipid biosynthetic process;codon_start=1;transl_table=11;product=glycerol-3-phosphate O-acyltransferase;protein_id=AAC77011.2;db_xref=GI:87082362;db_xref=ASAP:ABE-0013232;db_xref=UniProtKB/Swiss-Prot:P0A7A7;db_xref=EcoGene:EG10740 EMBL gene 4256637 4257005 . + . ID=.8775;gene=dgkA;locus_tag=b4042;gene_synonym=ECK4034;gene_synonym=JW4002;db_xref=EcoGene:EG10224 EMBL CDS 4256637 4257005 . + 0 ID=.8776;gene=dgkA;locus_tag=b4042;gene_synonym=ECK4034;gene_synonym=JW4002;ec_number=2.7.1.107;function=enzyme%3B Fatty acid and phosphatidic acid biosynthesis;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0008654 - phospholipid biosynthetic process;codon_start=1;transl_table=11;product=diacylglycerol kinase;protein_id=AAC77012.1;db_xref=GI:1790475;db_xref=ASAP:ABE-0013235;db_xref=UniProtKB/Swiss-Prot:P0ABN1;db_xref=EcoGene:EG10224 EMBL gene 4257115 4257723 . + . ID=.8777;gene=lexA;locus_tag=b4043;gene_synonym=ECK4035;gene_synonym=exrA;gene_synonym=JW4003;gene_synonym=spr;gene_synonym=tsl;gene_synonym=umuA;db_xref=EcoGene:EG10533 EMBL CDS 4257115 4257723 . + 0 ID=.8778;gene=lexA;locus_tag=b4043;gene_synonym=ECK4035;gene_synonym=exrA;gene_synonym=JW4003;gene_synonym=spr;gene_synonym=tsl;gene_synonym=umuA;ec_number=3.4.21.88;function=regulator%3B Global regulatory functions;note=regulator for SOS(lexA) regulon%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006281 - DNA repair%3B GO_process: GO:0006350 - transcription%3B GO_process: GO:0009432 - SOS response;codon_start=1;transl_table=11;product=transcriptional repressor of SOS regulon;protein_id=AAC77013.1;db_xref=GI:1790476;db_xref=ASAP:ABE-0013241;db_xref=UniProtKB/Swiss-Prot:P0A7C2;db_xref=EcoGene:EG10533 EMBL gene 4257742 4259121 . + . ID=.8779;gene=dinF;locus_tag=b4044;gene_synonym=ECK4036;gene_synonym=JW4004;db_xref=EcoGene:EG11491 EMBL CDS 4257742 4259121 . + 0 ID=.8780;gene=dinF;locus_tag=b4044;gene_synonym=ECK4036;gene_synonym=JW4004;function=factor%3B DNA - replication%2C repair%2C restriction/modification;note=DNA-damage-inducible protein F%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006281 - DNA repair%3B GO_process: GO:0009314 - response to radiation%3B GO_process: GO:0009432 - SOS response;codon_start=1;transl_table=11;product=oxidative stress resistance protein%3B putative MATE family efflux pump%3B UV and mitomycin C inducible protein;protein_id=AAC77014.1;db_xref=GI:1790477;db_xref=ASAP:ABE-0013243;db_xref=UniProtKB/Swiss-Prot:P28303;db_xref=EcoGene:EG11491 EMBL gene 4259237 4259446 . + . ID=.8781;gene=yjbJ;locus_tag=b4045;gene_synonym=ECK4037;gene_synonym=JW4005;db_xref=EcoGene:EG11928 EMBL CDS 4259237 4259446 . + 0 ID=.8782;gene=yjbJ;locus_tag=b4045;gene_synonym=ECK4037;gene_synonym=JW4005;experiment=N-terminus verified by Edman degradation: PMID 9298646%2C9868784;codon_start=1;transl_table=11;product=stress-induced protein%2C UPF0337 family;protein_id=AAC77015.1;db_xref=GI:1790479;db_xref=ASAP:ABE-0013247;db_xref=UniProtKB/Swiss-Prot:P68206;db_xref=EcoGene:EG11928 EMBL gene 4259488 4260003 . - . ID=.8783;gene=zur;locus_tag=b4046;gene_synonym=ECK4038;gene_synonym=JW5714;gene_synonym=yjbK;db_xref=EcoGene:EG11929 EMBL CDS 4259488 4260003 . - 0 ID=.8784;gene=zur;locus_tag=b4046;gene_synonym=ECK4038;gene_synonym=JW5714;gene_synonym=yjbK;function=putative regulator%3B Not classified;experiment=N-terminus verified by Edman degradation: PMID 10816566;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=transcriptional repressor%2C Zn(II)-binding;protein_id=AAC77016.2;db_xref=GI:87082363;db_xref=ASAP:ABE-0013249;db_xref=UniProtKB/Swiss-Prot:P0AC51;db_xref=EcoGene:EG11929 EMBL gene 4260321 4260575 . + . ID=.8785;gene=yjbL;locus_tag=b4047;gene_synonym=ECK4039;gene_synonym=JW4007;db_xref=EcoGene:EG11930 EMBL CDS 4260321 4260575 . + 0 ID=.8786;gene=yjbL;locus_tag=b4047;gene_synonym=ECK4039;gene_synonym=JW4007;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC77017.1;db_xref=GI:1790481;db_xref=ASAP:ABE-0013253;db_xref=UniProtKB/Swiss-Prot:P32693;db_xref=EcoGene:EG11930 EMBL gene 4260599 4261306 . + . ID=.8787;gene=yjbM;locus_tag=b4048;gene_synonym=ECK4040;gene_synonym=JW4008;db_xref=EcoGene:EG11931 EMBL CDS 4260599 4261306 . + 0 ID=.8788;gene=yjbM;locus_tag=b4048;gene_synonym=ECK4040;gene_synonym=JW4008;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC77018.1;db_xref=GI:1790482;db_xref=ASAP:ABE-0013255;db_xref=UniProtKB/Swiss-Prot:P32694;db_xref=EcoGene:EG11931 EMBL gene 4261669 4262706 . + . ID=.8789;gene=dusA;locus_tag=b4049;gene_synonym=ECK4041;gene_synonym=JW5950;gene_synonym=yjbN;db_xref=EcoGene:EG11932 EMBL CDS 4261669 4262706 . + 0 ID=.8790;gene=dusA;locus_tag=b4049;gene_synonym=ECK4041;gene_synonym=JW5950;gene_synonym=yjbN;function=enzyme%3B tRNA modification;codon_start=1;transl_table=11;product=tRNA-dihydrouridine synthase A;protein_id=AAC77019.3;db_xref=GI:558094920;db_xref=ASAP:ABE-0013258;db_xref=UniProtKB/Swiss-Prot:P32695;db_xref=EcoGene:EG11932 EMBL gene 4262840 4263082 . + . ID=.8791;gene=pspG;locus_tag=b4050;gene_synonym=ECK4042;gene_synonym=JW5716;gene_synonym=yjbO;db_xref=EcoGene:EG11933 EMBL CDS 4262840 4263082 . + 0 ID=.8792;gene=pspG;locus_tag=b4050;gene_synonym=ECK4042;gene_synonym=JW5716;gene_synonym=yjbO;codon_start=1;transl_table=11;product=phage shock protein G;protein_id=AAC77020.2;db_xref=GI:87082364;db_xref=ASAP:ABE-0013260;db_xref=UniProtKB/Swiss-Prot:P32696;db_xref=EcoGene:EG11933 EMBL gene 4263248 4264231 . - . ID=.8793;gene=qorA;locus_tag=b4051;gene_synonym=ECK4043;gene_synonym=hcz;gene_synonym=hzc;gene_synonym=JW4011;gene_synonym=qor;db_xref=EcoGene:EG11492 EMBL CDS 4263248 4264231 . - 0 ID=.8794;gene=qorA;locus_tag=b4051;gene_synonym=ECK4043;gene_synonym=hcz;gene_synonym=hzc;gene_synonym=JW4011;gene_synonym=qor;ec_number=1.6.5.5;function=enzyme%3B Energy metabolism%2C carbon: Electron transport;note=quinone oxidoreductase%3B GO_function: GO:0009055 - electron carrier activity;codon_start=1;transl_table=11;product=quinone oxidoreductase%2C NADPH-dependent;protein_id=AAC77021.1;db_xref=GI:1790485;db_xref=ASAP:ABE-0013262;db_xref=UniProtKB/Swiss-Prot:P28304;db_xref=EcoGene:EG11492 EMBL gene 4264314 4265729 . + . ID=.8795;gene=dnaB;locus_tag=b4052;gene_synonym=ECK4044;gene_synonym=groP;gene_synonym=grpA;gene_synonym=grpD;gene_synonym=JW4012;db_xref=EcoGene:EG10236 EMBL CDS 4264314 4265729 . + 0 ID=.8796;gene=dnaB;locus_tag=b4052;gene_synonym=ECK4044;gene_synonym=groP;gene_synonym=grpA;gene_synonym=grpD;gene_synonym=JW4012;ec_number=3.6.1.-;function=factor%3B DNA - replication%2C repair%2C restriction/modification;note=replicative DNA helicase%3B part of primosome%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006261 - DNA-dependent DNA replication;codon_start=1;transl_table=11;product=replicative DNA helicase;protein_id=AAC77022.1;db_xref=GI:1790486;db_xref=ASAP:ABE-0013269;db_xref=UniProtKB/Swiss-Prot:P0ACB0;db_xref=EcoGene:EG10236 EMBL gene 4265782 4266861 . + . ID=.8797;gene=alr;locus_tag=b4053;gene_synonym=ECK4045;gene_synonym=JW4013;db_xref=EcoGene:EG10001 EMBL CDS 4265782 4266861 . + 0 ID=.8798;gene=alr;locus_tag=b4053;gene_synonym=ECK4045;gene_synonym=JW4013;ec_number=5.1.1.1;function=enzyme%3B Amino acid biosynthesis: Alanine;note=alanine racemase 1%3B GO_process: GO:0006523 - alanine biosynthetic process;codon_start=1;transl_table=11;product=alanine racemase%2C biosynthetic%2C PLP-binding;protein_id=AAC77023.1;db_xref=GI:1790487;db_xref=ASAP:ABE-0013272;db_xref=UniProtKB/Swiss-Prot:P0A6B4;db_xref=EcoGene:EG10001 EMBL repeat_region 4266888 4266984 . + . ID=.8799;note=RIP318 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 4267114 4268307 . + . ID=.8800;gene=tyrB;locus_tag=b4054;gene_synonym=ECK4046;gene_synonym=JW4014;db_xref=EcoGene:EG11040 EMBL CDS 4267114 4268307 . + 0 ID=.8801;gene=tyrB;locus_tag=b4054;gene_synonym=ECK4046;gene_synonym=JW4014;ec_number=2.6.1.57;function=enzyme%3B Amino acid biosynthesis: Tyrosine;experiment=N-terminus verified by Edman degradation: PMID 3907634%2C8218300;note=tyrosine aminotransferase%2C tyrosine repressible%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009094 - L-phenylalanine biosynthetic process%3B GO_process: GO:0006571 - tyrosine biosynthetic process%3B GO_process: GO:0009098 - leucine biosynthetic process;codon_start=1;transl_table=11;product=tyrosine aminotransferase%2C tyrosine-repressible%2C PLP-dependent;protein_id=AAC77024.1;db_xref=GI:1790488;db_xref=ASAP:ABE-0013278;db_xref=UniProtKB/Swiss-Prot:P04693;db_xref=EcoGene:EG11040 EMBL repeat_region 4268317 4268340 . + . ID=.8802;note=REP319 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 4268809 4269012 . - . ID=.8803;gene=yjbS;locus_tag=b4621;gene_synonym=ECK4429;db_xref=EcoGene:EG14350 EMBL CDS 4268809 4269012 . - 0 ID=.8804;gene=yjbS;locus_tag=b4621;gene_synonym=ECK4429;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=ABP93458.1;db_xref=GI:145693212;db_xref=UniProtKB/Swiss-Prot:P58036;db_xref=EcoGene:EG14350 EMBL gene 4269414 4270127 . + . ID=.8805;gene=aphA;locus_tag=b4055;gene_synonym=ECK4047;gene_synonym=hobH;gene_synonym=JW4015;gene_synonym=napA;gene_synonym=yjbP;db_xref=EcoGene:EG11934 EMBL CDS 4269414 4270127 . + 0 ID=.8806;gene=aphA;locus_tag=b4055;gene_synonym=ECK4047;gene_synonym=hobH;gene_synonym=JW4015;gene_synonym=napA;gene_synonym=yjbP;ec_number=3.1.3.2;function=enzyme%3B Central intermediary metabolism: Nucleotide hydrolysis;note=diadenosine tetraphosphatase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion;codon_start=1;transl_table=11;product=acid phosphatase/phosphotransferase%2C class B%2C non-specific;protein_id=AAC77025.1;db_xref=GI:2367341;db_xref=ASAP:ABE-0013283;db_xref=UniProtKB/Swiss-Prot:P0AE22;db_xref=EcoGene:EG11934 EMBL gene 4270238 4270654 . + . ID=.8807;gene=yjbQ;locus_tag=b4056;gene_synonym=ECK4048;gene_synonym=JW4017;db_xref=EcoGene:EG11935 EMBL CDS 4270238 4270654 . + 0 ID=.8808;gene=yjbQ;locus_tag=b4056;gene_synonym=ECK4048;gene_synonym=JW4017;codon_start=1;transl_table=11;product=thiamine phosphate synthase;protein_id=AAC77026.1;db_xref=GI:1790491;db_xref=ASAP:ABE-0013286;db_xref=UniProtKB/Swiss-Prot:P0AF48;db_xref=EcoGene:EG11935 EMBL gene 4270658 4271014 . + . ID=.8809;gene=yjbR;locus_tag=b4057;gene_synonym=ECK4049;gene_synonym=JW4018;db_xref=EcoGene:EG11936 EMBL CDS 4270658 4271014 . + 0 ID=.8810;gene=yjbR;locus_tag=b4057;gene_synonym=ECK4049;gene_synonym=JW4018;experiment=N-terminus verified by Edman degradation: PMID 9868784;codon_start=1;transl_table=11;product=DUF419 family protein;protein_id=AAC77027.1;db_xref=GI:2367342;db_xref=ASAP:ABE-0013288;db_xref=UniProtKB/Swiss-Prot:P0AF50;db_xref=EcoGene:EG11936 EMBL gene 4271049 4273871 . - . ID=.8811;gene=uvrA;locus_tag=b4058;gene_synonym=dar;gene_synonym=ECK4050;gene_synonym=JW4019;db_xref=EcoGene:EG11061 EMBL CDS 4271049 4273871 . - 0 ID=.8812;gene=uvrA;locus_tag=b4058;gene_synonym=dar;gene_synonym=ECK4050;gene_synonym=JW4019;function=enzyme%3B DNA - replication%2C repair%2C restriction/modification;experiment=N-terminus verified by Edman degradation: PMID 3007478;note=excision nuclease subunit A%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006281 - DNA repair%3B GO_process: GO:0009314 - response to radiation%3B GO_process: GO:0009432 - SOS response;codon_start=1;transl_table=11;product=ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC;protein_id=AAC77028.1;db_xref=GI:2367343;db_xref=ASAP:ABE-0013290;db_xref=UniProtKB/Swiss-Prot:P0A698;db_xref=EcoGene:EG11061 EMBL gene 4274125 4274661 . + . ID=.8813;gene=ssb;locus_tag=b4059;gene_synonym=ECK4051;gene_synonym=exrB;gene_synonym=JW4020;gene_synonym=lexC;db_xref=EcoGene:EG10976 EMBL CDS 4274125 4274661 . + 0 ID=.8814;gene=ssb;locus_tag=b4059;gene_synonym=ECK4051;gene_synonym=exrB;gene_synonym=JW4020;gene_synonym=lexC;function=factor%3B DNA - replication%2C repair%2C restriction/modification;note=ssDNA-binding protein%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006310 - DNA recombination%3B GO_process: GO:0009432 - SOS response;codon_start=1;transl_table=11;product=single-stranded DNA-binding protein;protein_id=AAC77029.1;db_xref=GI:1790494;db_xref=ASAP:ABE-0013298;db_xref=UniProtKB/Swiss-Prot:P0AGE0;db_xref=EcoGene:EG10976 EMBL gene 4274760 4275041 . - . ID=.8815;gene=yjcB;locus_tag=b4060;gene_synonym=ECK4052;gene_synonym=JW5718;db_xref=EcoGene:EG11937 EMBL CDS 4274760 4275041 . - 0 ID=.8816;gene=yjcB;locus_tag=b4060;gene_synonym=ECK4052;gene_synonym=JW5718;codon_start=1;transl_table=11;product=putative inner membrane protein;protein_id=AAC77030.2;db_xref=GI:87082365;db_xref=ASAP:ABE-0013300;db_xref=UniProtKB/Swiss-Prot:P32700;db_xref=EcoGene:EG11937 EMBL gene 4275471 4277057 . + . ID=.8817;gene=yjcC;locus_tag=b4061;gene_synonym=ECK4053;gene_synonym=JW4022;db_xref=EcoGene:EG11938 EMBL CDS 4275471 4277057 . + 0 ID=.8818;gene=yjcC;locus_tag=b4061;gene_synonym=ECK4053;gene_synonym=JW4022;codon_start=1;transl_table=11;product=putative membrane-anchored cyclic-di-GMP phosphodiesterase;protein_id=AAC77031.1;db_xref=GI:1790496;db_xref=ASAP:ABE-0013309;db_xref=UniProtKB/Swiss-Prot:P32701;db_xref=EcoGene:EG11938 EMBL gene 4277060 4277383 . - . ID=.8819;gene=soxS;locus_tag=b4062;gene_synonym=ECK4054;gene_synonym=JW4023;db_xref=EcoGene:EG10958 EMBL CDS 4277060 4277383 . - 0 ID=.8820;gene=soxS;locus_tag=b4062;gene_synonym=ECK4054;gene_synonym=JW4023;function=regulator%3B Global regulatory functions;note=regulation of superoxide response regulon%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0006350 - transcription%3B GO_process: GO:0006805 - xenobiotic metabolic process;codon_start=1;transl_table=11;product=superoxide response regulon transcriptional activator%3B autoregulator;protein_id=AAC77032.1;db_xref=GI:1790497;db_xref=ASAP:ABE-0013311;db_xref=UniProtKB/Swiss-Prot:P0A9E2;db_xref=EcoGene:EG10958 EMBL gene 4277469 4277933 . + . ID=.8821;gene=soxR;locus_tag=b4063;gene_synonym=ECK4055;gene_synonym=JW4024;gene_synonym=marC;db_xref=EcoGene:EG10957 EMBL CDS 4277469 4277933 . + 0 ID=.8822;gene=soxR;locus_tag=b4063;gene_synonym=ECK4055;gene_synonym=JW4024;gene_synonym=marC;function=regulator%3B Global regulatory functions;note=redox-sensing activator of soxS%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0006350 - transcription%3B GO_process: GO:0006805 - xenobiotic metabolic process;codon_start=1;transl_table=11;product=redox-sensitive transcriptional activator of soxS%3B autorepressor;protein_id=AAC77033.1;db_xref=GI:1790498;db_xref=ASAP:ABE-0013316;db_xref=UniProtKB/Swiss-Prot:P0ACS2;db_xref=EcoGene:EG10957 EMBL gene 4277927 4278066 . - . ID=.8823;gene=ryjA;locus_tag=b4459;gene_synonym=ECK4056;gene_synonym=JWR0258;gene_synonym=sraL;db_xref=EcoGene:EG31166 EMBL ncRNA 4277927 4278066 . - . ID=.8824;ncrna_class=other;gene=ryjA;locus_tag=b4459;gene_synonym=ECK4056;gene_synonym=JWR0258;gene_synonym=sraL;product=novel sRNA%2C function unknown;note=identified in a large scale screen;db_xref=ASAP:ABE-0047277;db_xref=EcoGene:EG31166 EMBL gene 4278479 4279828 . + . ID=.8825;gene=ghxP;locus_tag=b4064;gene_synonym=ECK4057;gene_synonym=JW4025;gene_synonym=yjcD;db_xref=EcoGene:EG11939 EMBL CDS 4278479 4279828 . + 0 ID=.8826;gene=ghxP;locus_tag=b4064;gene_synonym=ECK4057;gene_synonym=JW4025;gene_synonym=yjcD;function=transport%3B Transport of small molecules: Nucleosides%2C purines%2C pyrimidines;codon_start=1;transl_table=11;product=guanine/hypoxanthine permease%2C high affinity%3B guanine/hypoxanthine:H+ symporter;protein_id=AAC77034.1;db_xref=GI:1790499;db_xref=ASAP:ABE-0013319;db_xref=UniProtKB/Swiss-Prot:P0AF52;db_xref=EcoGene:EG11939 EMBL gene 4279980 4281629 . + . ID=.8827;gene=yjcE;locus_tag=b4065;gene_synonym=ECK4058;gene_synonym=JW4026;db_xref=EcoGene:EG11940 EMBL CDS 4279980 4281629 . + 0 ID=.8828;gene=yjcE;locus_tag=b4065;gene_synonym=ECK4058;gene_synonym=JW4026;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative cation/proton antiporter;protein_id=AAC77035.1;db_xref=GI:1790501;db_xref=ASAP:ABE-0013323;db_xref=UniProtKB/Swiss-Prot:P32703;db_xref=EcoGene:EG11940 EMBL gene 4281783 4283075 . - . ID=.8829;gene=yjcF;locus_tag=b4066;gene_synonym=ECK4059;gene_synonym=JW4027;db_xref=EcoGene:EG11941 EMBL CDS 4281783 4283075 . - 0 ID=.8830;gene=yjcF;locus_tag=b4066;gene_synonym=ECK4059;gene_synonym=JW4027;codon_start=1;transl_table=11;product=pentapeptide repeats protein;protein_id=AAC77036.1;db_xref=GI:1790502;db_xref=ASAP:ABE-0013325;db_xref=UniProtKB/Swiss-Prot:P32704;db_xref=EcoGene:EG11941 EMBL gene 4283253 4284902 . - . ID=.8831;gene=actP;locus_tag=b4067;gene_synonym=ECK4060;gene_synonym=JW4028;gene_synonym=yjcG;db_xref=EcoGene:EG11942 EMBL CDS 4283253 4284902 . - 0 ID=.8832;gene=actP;locus_tag=b4067;gene_synonym=ECK4060;gene_synonym=JW4028;gene_synonym=yjcG;note=acetate permease%3B also transports glycolate with a rate high enough to support growth on this carbon source%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=acetate transporter;protein_id=AAC77037.1;db_xref=GI:1790503;db_xref=ASAP:ABE-0013328;db_xref=UniProtKB/Swiss-Prot:P32705;db_xref=EcoGene:EG11942 EMBL gene 4284899 4285213 . - . ID=.8833;gene=yjcH;locus_tag=b4068;gene_synonym=ECK4061;gene_synonym=JW4029;db_xref=EcoGene:EG11943 EMBL CDS 4284899 4285213 . - 0 ID=.8834;gene=yjcH;locus_tag=b4068;gene_synonym=ECK4061;gene_synonym=JW4029;codon_start=1;transl_table=11;product=DUF485 family inner membrane protein;protein_id=AAC77038.1;db_xref=GI:1790504;db_xref=ASAP:ABE-0013330;db_xref=UniProtKB/Swiss-Prot:P0AF54;db_xref=EcoGene:EG11943 EMBL repeat_region 4285302 4285378 . + . ID=.8835;note=REP320 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 4285413 4287371 . - . ID=.8836;gene=acs;locus_tag=b4069;gene_synonym=acsA;gene_synonym=ECK4062;gene_synonym=JW4030;gene_synonym=yfaC;db_xref=EcoGene:EG11448 EMBL CDS 4285413 4287371 . - 0 ID=.8837;gene=acs;locus_tag=b4069;gene_synonym=acsA;gene_synonym=ECK4062;gene_synonym=JW4030;gene_synonym=yfaC;ec_number=6.2.1.1;function=enzyme%3B Fatty acid and phosphatidic acid biosynthesis;note=GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0045733 - acetate catabolic process;codon_start=1;transl_table=11;product=acetyl-CoA synthetase;protein_id=AAC77039.1;db_xref=GI:1790505;db_xref=ASAP:ABE-0013337;db_xref=UniProtKB/Swiss-Prot:P27550;db_xref=EcoGene:EG11448 EMBL gene 4287764 4289200 . + . ID=.8838;gene=nrfA;locus_tag=b4070;gene_synonym=ECK4063;gene_synonym=JW4031;db_xref=EcoGene:EG11781 EMBL CDS 4287764 4289200 . + 0 ID=.8839;gene=nrfA;locus_tag=b4070;gene_synonym=ECK4063;gene_synonym=JW4031;function=carrier%3B Energy metabolism%2C carbon: Electron transport;note=periplasmic cytochrome c(552): plays a role in nitrite reduction%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0017004 - cytochrome complex assembly;codon_start=1;transl_table=11;product=nitrite reductase%2C formate-dependent%2C cytochrome;protein_id=AAC77040.1;db_xref=GI:1790506;db_xref=ASAP:ABE-0013342;db_xref=UniProtKB/Swiss-Prot:P0ABK9;db_xref=EcoGene:EG11781 EMBL gene 4289245 4289811 . + . ID=.8840;gene=nrfB;locus_tag=b4071;gene_synonym=ECK4064;gene_synonym=JW4032;gene_synonym=yjcI;db_xref=EcoGene:EG11945 EMBL CDS 4289245 4289811 . + 0 ID=.8841;gene=nrfB;locus_tag=b4071;gene_synonym=ECK4064;gene_synonym=JW4032;gene_synonym=yjcI;ec_number=1.7.2.2;function=enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;note=formate-dependent nitrite reductase%3B a penta-haeme cytochrome c%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0017004 - cytochrome complex assembly;codon_start=1;transl_table=11;product=nitrite reductase%2C formate-dependent%2C penta-heme cytochrome c;protein_id=AAC77041.2;db_xref=GI:87082366;db_xref=ASAP:ABE-0013344;db_xref=UniProtKB/Swiss-Prot:P0ABL1;db_xref=EcoGene:EG11945 EMBL gene 4289808 4290479 . + . ID=.8842;gene=nrfC;locus_tag=b4072;gene_synonym=ECK4065;gene_synonym=JW4033;gene_synonym=yjcJ;db_xref=EcoGene:EG11946 EMBL CDS 4289808 4290479 . + 0 ID=.8843;gene=nrfC;locus_tag=b4072;gene_synonym=ECK4065;gene_synonym=JW4033;gene_synonym=yjcJ;function=enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;note=formate-dependent nitrite reductase%3B Fe-S centers%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=formate-dependent nitrite reductase%2C 4Fe4S subunit;protein_id=AAC77042.1;db_xref=GI:2367345;db_xref=ASAP:ABE-0013346;db_xref=UniProtKB/Swiss-Prot:P0AAK7;db_xref=EcoGene:EG11946 EMBL gene 4290476 4291432 . + . ID=.8844;gene=nrfD;locus_tag=b4073;gene_synonym=ECK4066;gene_synonym=JW4034;gene_synonym=yjcK;db_xref=EcoGene:EG11947 EMBL CDS 4290476 4291432 . + 0 ID=.8845;gene=nrfD;locus_tag=b4073;gene_synonym=ECK4066;gene_synonym=JW4034;gene_synonym=yjcK;function=enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;note=formate-dependent nitrate reductase complex%3B transmembrane protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=formate-dependent nitrite reductase%2C membrane subunit;protein_id=AAC77043.1;db_xref=GI:1790509;db_xref=ASAP:ABE-0013348;db_xref=UniProtKB/Swiss-Prot:P32709;db_xref=EcoGene:EG11947 EMBL gene 4291512 4293170 . + . ID=.8846;gene=nrfE;locus_tag=b4074;gene_synonym=ECK4067;gene_synonym=JW4035;gene_synonym=yjcL;db_xref=EcoGene:EG11948 EMBL CDS 4291512 4293170 . + 0 ID=.8847;gene=nrfE;locus_tag=b4074;gene_synonym=ECK4067;gene_synonym=JW4035;gene_synonym=yjcL;function=enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;note=formate-dependent nitrite reductase%3B possible assembly function%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0017004 - cytochrome complex assembly%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=heme lyase (NrfEFG) for insertion of heme into c552%2C subunit NrfE;protein_id=AAD13457.1;db_xref=GI:1790511;db_xref=ASAP:ABE-0013350;db_xref=UniProtKB/Swiss-Prot:P32710;db_xref=EcoGene:EG11948 EMBL gene 4293163 4293546 . + . ID=.8848;gene=nrfF;locus_tag=b4075;gene_synonym=ECK4068;gene_synonym=JW4036;gene_synonym=yjcM;db_xref=EcoGene:EG11949 EMBL CDS 4293163 4293546 . + 0 ID=.8849;gene=nrfF;locus_tag=b4075;gene_synonym=ECK4068;gene_synonym=JW4036;gene_synonym=yjcM;function=enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;note=part of formate-dependent nitrite reductase complex%3B GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0017004 - cytochrome complex assembly%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=heme lyase (NrfEFG) for insertion of heme into c552%2C subunit NrfF;protein_id=AAD13458.1;db_xref=GI:1790512;db_xref=ASAP:ABE-0013352;db_xref=UniProtKB/Swiss-Prot:P32711;db_xref=EcoGene:EG11949 EMBL gene 4293543 4294139 . + . ID=.8850;gene=nrfG;locus_tag=b4076;gene_synonym=aidC;gene_synonym=ECK4069;gene_synonym=JW4037;gene_synonym=yjcN;db_xref=EcoGene:EG11950 EMBL CDS 4293543 4294139 . + 0 ID=.8851;gene=nrfG;locus_tag=b4076;gene_synonym=aidC;gene_synonym=ECK4069;gene_synonym=JW4037;gene_synonym=yjcN;function=enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;note=part of formate-dependent nitrite reductase complex%3B GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0017004 - cytochrome complex assembly%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=heme lyase (NrfEFG) for insertion of heme into c552%2C subunit NrfG;protein_id=AAD13459.1;db_xref=GI:1790513;db_xref=ASAP:ABE-0013354;db_xref=UniProtKB/Swiss-Prot:P32712;db_xref=EcoGene:EG11950 EMBL gene 4294481 4295794 . + . ID=.8852;gene=gltP;locus_tag=b4077;gene_synonym=ECK4070;gene_synonym=JW4038;db_xref=EcoGene:EG10405 EMBL CDS 4294481 4295794 . + 0 ID=.8853;gene=gltP;locus_tag=b4077;gene_synonym=ECK4070;gene_synonym=JW4038;function=transport%3B Transport of small molecules: Amino acids%2C amines;note=glutamate-aspartate symport protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006537 - glutamate biosynthetic process%3B GO_process: GO:0006532 - aspartate biosynthetic process;codon_start=1;transl_table=11;product=glutamate/aspartate:proton symporter;protein_id=AAD13460.1;db_xref=GI:1790514;db_xref=ASAP:ABE-0013357;db_xref=UniProtKB/Swiss-Prot:P21345;db_xref=EcoGene:EG10405 EMBL repeat_region 4295835 4296434 . + . ID=.8854;note=RIP321 (repetitive extragenic palindromic) element%3B contains 11 REP sequences and 4 IHF sites EMBL gene 4296436 4297125 . - . ID=.8855;gene=yjcO;locus_tag=b4078;gene_synonym=ECK4071;gene_synonym=JW4039;db_xref=EcoGene:EG11951 EMBL CDS 4296436 4297125 . - 0 ID=.8856;gene=yjcO;locus_tag=b4078;gene_synonym=ECK4071;gene_synonym=JW4039;codon_start=1;transl_table=11;product=Sel1 family TPR-like repeat protein;protein_id=AAD13461.1;db_xref=GI:1790515;db_xref=ASAP:ABE-0013360;db_xref=UniProtKB/Swiss-Prot:P0AF56;db_xref=EcoGene:EG11951 EMBL gene 4297219 4299366 . - . ID=.8857;gene=fdhF;locus_tag=b4079;gene_synonym=ECK4072;gene_synonym=JW4040;db_xref=EcoGene:EG10285 EMBL CDS 4297219 4299366 . - 0 ID=.8858;gene=fdhF;locus_tag=b4079;gene_synonym=ECK4072;gene_synonym=JW4040;ec_number=1.2.1.2;function=enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;experiment=N-terminus verified by Edman degradation: PMID 2211698;note=selenopolypeptide subunit of formate dehydrogenase H%3B GO_process: GO:0006113 - fermentation;codon_start=1;transl_except=(pos:complement(4298947..4298949)%2Caa:Sec);transl_table=11;product=formate dehydrogenase-H%2C selenopolypeptide subunit;protein_id=AAD13462.1;db_xref=GI:3868721;db_xref=ASAP:ABE-0013363;db_xref=UniProtKB/Swiss-Prot:P07658;db_xref=EcoGene:EG10285 EMBL gene 4299564 4301030 . - . ID=.8859;gene=mdtP;locus_tag=b4080;gene_synonym=ECK4073;gene_synonym=JW4041;gene_synonym=sdsP;gene_synonym=yjcP;db_xref=EcoGene:EG11952 EMBL CDS 4299564 4301030 . - 0 ID=.8860;gene=mdtP;locus_tag=b4080;gene_synonym=ECK4073;gene_synonym=JW4041;gene_synonym=sdsP;gene_synonym=yjcP;function=orf%3B Not classified;note=putative enzyme%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane;codon_start=1;transl_table=11;product=outer membrane factor of efflux pump;protein_id=AAD13463.1;db_xref=GI:2367348;db_xref=ASAP:ABE-0013366;db_xref=UniProtKB/Swiss-Prot:P32714;db_xref=EcoGene:EG11952 EMBL gene 4301027 4303078 . - . ID=.8861;gene=mdtO;locus_tag=b4081;gene_synonym=ECK4074;gene_synonym=JW4042;gene_synonym=sdsQ;gene_synonym=yjcQ;db_xref=EcoGene:EG11953 EMBL CDS 4301027 4303078 . - 0 ID=.8862;gene=mdtO;locus_tag=b4081;gene_synonym=ECK4074;gene_synonym=JW4042;gene_synonym=sdsQ;gene_synonym=yjcQ;function=orf%3B Not classified;note=putative enzyme;codon_start=1;transl_table=11;product=membrane translocase (MDR) of MdtNOP efflux pump%2C PET family;protein_id=AAD13464.2;db_xref=GI:87082367;db_xref=ASAP:ABE-0013368;db_xref=UniProtKB/Swiss-Prot:P32715;db_xref=EcoGene:EG11953 EMBL gene 4303078 4304109 . - . ID=.8863;gene=mdtN;locus_tag=b4082;gene_synonym=ECK4075;gene_synonym=JW4043;gene_synonym=sdsR;gene_synonym=yjcR;db_xref=EcoGene:EG11954 EMBL CDS 4303078 4304109 . - 0 ID=.8864;gene=mdtN;locus_tag=b4082;gene_synonym=ECK4075;gene_synonym=JW4043;gene_synonym=sdsR;gene_synonym=yjcR;function=putative membrane%3B Not classified;note=putative membrane protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=membrane fusion protein of efflux pump;protein_id=AAD13465.1;db_xref=GI:1790519;db_xref=ASAP:ABE-0013373;db_xref=UniProtKB/Swiss-Prot:P32716;db_xref=EcoGene:EG11954 EMBL gene 4304128 4304403 . - . ID=.8865;gene=ytcA;locus_tag=b4622;gene_synonym=ECK4430;db_xref=EcoGene:EG14401 EMBL CDS 4304128 4304403 . - 0 ID=.8866;gene=ytcA;locus_tag=b4622;gene_synonym=ECK4430;codon_start=1;transl_table=11;product=putative inner membrane efflux pump-associated DUF1656 family protein;protein_id=ABP93459.1;db_xref=GI:145693213;db_xref=UniProtKB/Swiss-Prot:A5A630;db_xref=EcoGene:EG14401 EMBL gene 4304612 4306597 . - . ID=.8867;gene=yjcS;locus_tag=b4083;gene_synonym=ECK4076;gene_synonym=JW5721;db_xref=EcoGene:EG11955 EMBL CDS 4304612 4306597 . - 0 ID=.8868;gene=yjcS;locus_tag=b4083;gene_synonym=ECK4076;gene_synonym=JW5721;note=GO_process: GO:0006790 - sulfur metabolic process;codon_start=1;transl_table=11;product=metallo-beta-lactamase superfamily protein;protein_id=AAC77044.2;db_xref=GI:87082368;db_xref=ASAP:ABE-0013377;db_xref=UniProtKB/Swiss-Prot:P32717;db_xref=EcoGene:EG11955 EMBL gene 4306870 4307799 . - . ID=.8869;gene=alsK;locus_tag=b4084;gene_synonym=ECK4077;gene_synonym=JW5724;gene_synonym=yjcT;db_xref=EcoGene:EG11956 EMBL CDS 4306870 4307799 . - 0 ID=.8870;gene=alsK;locus_tag=b4084;gene_synonym=ECK4077;gene_synonym=JW5724;gene_synonym=yjcT;ec_number=2.7.1.55;function=putative regulator%3B Not classified;note=GO_process: GO:0006355 - regulation of transcription%2C DNA-dependent;codon_start=1;transl_table=11;product=D-allose kinase;protein_id=AAC77045.1;db_xref=GI:1790522;db_xref=ASAP:ABE-0013380;db_xref=UniProtKB/Swiss-Prot:P32718;db_xref=EcoGene:EG11956 EMBL gene 4307783 4308478 . - . ID=.8871;gene=alsE;locus_tag=b4085;gene_synonym=ECK4078;gene_synonym=JW4046;gene_synonym=yjcU;db_xref=EcoGene:EG11957 EMBL CDS 4307783 4308478 . - 0 ID=.8872;gene=alsE;locus_tag=b4085;gene_synonym=ECK4078;gene_synonym=JW4046;gene_synonym=yjcU;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=allulose-6-phosphate 3-epimerase;protein_id=AAC77046.1;db_xref=GI:1790523;db_xref=ASAP:ABE-0013382;db_xref=UniProtKB/Swiss-Prot:P32719;db_xref=EcoGene:EG11957 EMBL gene 4308489 4309469 . - . ID=.8873;gene=alsC;locus_tag=b4086;gene_synonym=ECK4079;gene_synonym=JW4047;gene_synonym=yjcV;db_xref=EcoGene:EG11958 EMBL CDS 4308489 4309469 . - 0 ID=.8874;gene=alsC;locus_tag=b4086;gene_synonym=ECK4079;gene_synonym=JW4047;gene_synonym=yjcV;function=putative transport%3B Not classified;note=membrane component of ABC superfamily%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=D-allose ABC transporter permease;protein_id=AAC77047.1;db_xref=GI:1790524;db_xref=ASAP:ABE-0013392;db_xref=UniProtKB/Swiss-Prot:P32720;db_xref=EcoGene:EG11958 EMBL gene 4309448 4310980 . - . ID=.8875;gene=alsA;locus_tag=b4087;gene_synonym=ECK4080;gene_synonym=JW4048;gene_synonym=yjcW;db_xref=EcoGene:EG11959 EMBL CDS 4309448 4310980 . - 0 ID=.8876;gene=alsA;locus_tag=b4087;gene_synonym=ECK4080;gene_synonym=JW4048;gene_synonym=yjcW;function=putative transport%3B Not classified;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=D-allose ABC transporter ATPase;protein_id=AAC77048.1;db_xref=GI:1790525;db_xref=ASAP:ABE-0013394;db_xref=UniProtKB/Swiss-Prot:P32721;db_xref=EcoGene:EG11959 EMBL repeat_region 4311014 4311095 . + . ID=.8877;note=REP322 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 4311107 4312042 . - . ID=.8878;gene=alsB;locus_tag=b4088;gene_synonym=ECK4081;gene_synonym=JW4049;gene_synonym=yjcX;db_xref=EcoGene:EG12458 EMBL CDS 4311107 4312042 . - 0 ID=.8879;gene=alsB;locus_tag=b4088;gene_synonym=ECK4081;gene_synonym=JW4049;gene_synonym=yjcX;function=putative regulator%3B Not classified;note=periplasmic-binding component of ABC superfamily%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=D-allose ABC transporter periplasmic binding protein;protein_id=AAC77049.1;db_xref=GI:1790526;db_xref=ASAP:ABE-0013398;db_xref=UniProtKB/Swiss-Prot:P39265;db_xref=EcoGene:EG12458 EMBL gene 4312101 4312991 . - . ID=.8880;gene=alsR;locus_tag=b4089;gene_synonym=ECK4082;gene_synonym=JW4050;gene_synonym=rpiR;gene_synonym=yjcY;db_xref=EcoGene:EG12459 EMBL CDS 4312101 4312991 . - 0 ID=.8881;gene=alsR;locus_tag=b4089;gene_synonym=ECK4082;gene_synonym=JW4050;gene_synonym=rpiR;gene_synonym=yjcY;function=regulator%3B Central intermediary metabolism: Non-oxidative branch%2C pentose pathway;note=transcriptional repressor of rpiB expression%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0009052 - pentose-phosphate shunt%2C non-oxidative branch%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=d-allose-inducible als operon transcriptional repressor%3B autorepressor%3B repressor of rpiR;protein_id=AAC77050.2;db_xref=GI:87082369;db_xref=ASAP:ABE-0013400;db_xref=UniProtKB/Swiss-Prot:P0ACS7;db_xref=EcoGene:EG12459 EMBL gene 4313350 4313799 . + . ID=.8882;gene=rpiB;locus_tag=b4090;gene_synonym=alsB;gene_synonym=alsI;gene_synonym=ECK4083;gene_synonym=JW4051;gene_synonym=yjcA;db_xref=EcoGene:EG11827 EMBL CDS 4313350 4313799 . + 0 ID=.8883;gene=rpiB;locus_tag=b4090;gene_synonym=alsB;gene_synonym=alsI;gene_synonym=ECK4083;gene_synonym=JW4051;gene_synonym=yjcA;ec_number=5.3.1.6;function=enzyme%3B Central intermediary metabolism: Non-oxidative branch%2C pentose pathway;note=ribose 5-phosphate isomerase B%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0009052 - pentose-phosphate shunt%2C non-oxidative branch;codon_start=1;transl_table=11;product=ribose 5-phosphate isomerase B/allose 6-phosphate isomerase;protein_id=AAC77051.1;db_xref=GI:1790528;db_xref=ASAP:ABE-0013405;db_xref=UniProtKB/Swiss-Prot:P37351;db_xref=EcoGene:EG11827 EMBL gene 4313868 4314197 . + . ID=.8884;gene=yjdP;locus_tag=b4487;gene_synonym=ECK4084;gene_synonym=JW5890;db_xref=EcoGene:EG14407 EMBL CDS 4313868 4314197 . + 0 ID=.8885;gene=yjdP;locus_tag=b4487;gene_synonym=ECK4084;gene_synonym=JW5890;note=conserved hypothetical protein%3B conserved in EDL933 and CFT073%3B on opposite strand of the now deaccessioned phnQ (b4091);codon_start=1;transl_table=11;product=putative periplasmic protein;protein_id=AAT48239.1;db_xref=GI:48994996;db_xref=ASAP:ABE-0174120;db_xref=UniProtKB/Swiss-Prot:Q6BEX5;db_xref=EcoGene:EG14407 EMBL gene 4314344 4315102 . - . ID=.8886;gene=phnP;locus_tag=b4092;gene_synonym=ECK4085;gene_synonym=JW4053;db_xref=EcoGene:EG10725 EMBL CDS 4314344 4315102 . - 0 ID=.8887;gene=phnP;locus_tag=b4092;gene_synonym=ECK4085;gene_synonym=JW4053;function=enzyme%3B Central intermediary metabolism: Phosphorus compounds;note=phosphonate metabolism%3B GO_process: GO:0006793 - phosphorus metabolic process;codon_start=1;transl_table=11;product=5-phospho-alpha-D-ribosyl 1%2C2-cyclic phosphate phosphodiesterase;protein_id=AAC77053.1;db_xref=GI:1790530;db_xref=ASAP:ABE-0013412;db_xref=UniProtKB/Swiss-Prot:P16692;db_xref=EcoGene:EG10725 EMBL gene 4315104 4315538 . - . ID=.8888;gene=phnO;locus_tag=b4093;gene_synonym=ECK4086;gene_synonym=JW4054;db_xref=EcoGene:EG10724 EMBL CDS 4315104 4315538 . - 0 ID=.8889;gene=phnO;locus_tag=b4093;gene_synonym=ECK4086;gene_synonym=JW4054;function=enzyme%3B Central intermediary metabolism: Phosphorus compounds;note=putative regulator%2C phn operon;codon_start=1;transl_table=11;product=aminoalkylphosphonate N-acetyltransferase;protein_id=AAC77054.1;db_xref=GI:1790531;db_xref=ASAP:ABE-0013415;db_xref=UniProtKB/Swiss-Prot:P16691;db_xref=EcoGene:EG10724 EMBL gene 4315525 4316082 . - . ID=.8890;gene=phnN;locus_tag=b4094;gene_synonym=ECK4087;gene_synonym=JW4055;db_xref=EcoGene:EG10723 EMBL CDS 4315525 4316082 . - 0 ID=.8891;gene=phnN;locus_tag=b4094;gene_synonym=ECK4087;gene_synonym=JW4055;function=transport%3B Central intermediary metabolism: Phosphorus compounds;note=ATP-binding component of phosphonate transport%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006793 - phosphorus metabolic process;codon_start=1;transl_table=11;product=ribose 1%2C5-bisphosphokinase;protein_id=AAC77055.1;db_xref=GI:1790532;db_xref=ASAP:ABE-0013417;db_xref=UniProtKB/Swiss-Prot:P16690;db_xref=EcoGene:EG10723 EMBL gene 4316082 4317218 . - . ID=.8892;gene=phnM;locus_tag=b4095;gene_synonym=ECK4088;gene_synonym=JW4056;db_xref=EcoGene:EG10722 EMBL CDS 4316082 4317218 . - 0 ID=.8893;gene=phnM;locus_tag=b4095;gene_synonym=ECK4088;gene_synonym=JW4056;function=enzyme%3B Central intermediary metabolism: Phosphorus compounds;note=phosphonate metabolism%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006793 - phosphorus metabolic process;codon_start=1;transl_table=11;product=ribophosphonate triphosphate hydrolase;protein_id=AAC77056.1;db_xref=GI:1790533;db_xref=ASAP:ABE-0013419;db_xref=UniProtKB/Swiss-Prot:P16689;db_xref=EcoGene:EG10722 EMBL gene 4317215 4317895 . - . ID=.8894;gene=phnL;locus_tag=b4096;gene_synonym=ECK4089;gene_synonym=JW4057;db_xref=EcoGene:EG10721 EMBL CDS 4317215 4317895 . - 0 ID=.8895;gene=phnL;locus_tag=b4096;gene_synonym=ECK4089;gene_synonym=JW4057;function=enzyme%3B Central intermediary metabolism: Phosphorus compounds;note=ATP-binding component of phosphonate transport%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006793 - phosphorus metabolic process;codon_start=1;transl_table=11;product=ribophosphonate triphosphate synthase subunit%3B putative ABC transporter-related ATPase;protein_id=AAC77057.1;db_xref=GI:1790534;db_xref=ASAP:ABE-0013421;db_xref=UniProtKB/Swiss-Prot:P16679;db_xref=EcoGene:EG10721 EMBL repeat_region 4317917 4317999 . + . ID=.8896;note=REP323 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 4318006 4318764 . - . ID=.8897;gene=phnK;locus_tag=b4097;gene_synonym=ECK4090;gene_synonym=JW5727;db_xref=EcoGene:EG10720 EMBL CDS 4318006 4318764 . - 0 ID=.8898;gene=phnK;locus_tag=b4097;gene_synonym=ECK4090;gene_synonym=JW5727;function=enzyme%3B Central intermediary metabolism: Phosphorus compounds;note=ATP-binding component of phosphonate transport%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006793 - phosphorus metabolic process;codon_start=1;transl_table=11;product=carbon-phosphorus lyase complex subunit%2C putative ATP transporter ATP-binding protein;protein_id=AAT48240.1;db_xref=GI:48994997;db_xref=ASAP:ABE-0013424;db_xref=UniProtKB/Swiss-Prot:P16678;db_xref=EcoGene:EG10720 EMBL gene 4318761 4319606 . - . ID=.8899;gene=phnJ;locus_tag=b4098;gene_synonym=ECK4091;gene_synonym=JW4059;db_xref=EcoGene:EG10719 EMBL CDS 4318761 4319606 . - 0 ID=.8900;gene=phnJ;locus_tag=b4098;gene_synonym=ECK4091;gene_synonym=JW4059;function=enzyme%3B Central intermediary metabolism: Phosphorus compounds;note=phosphonate metabolism;codon_start=1;transl_table=11;product=carbon-phosphorus lyase%2C SAM-dependent;protein_id=AAC77059.1;db_xref=GI:1790536;db_xref=ASAP:ABE-0013426;db_xref=UniProtKB/Swiss-Prot:P16688;db_xref=EcoGene:EG10719 EMBL gene 4319599 4320663 . - . ID=.8901;gene=phnI;locus_tag=b4099;gene_synonym=ECK4092;gene_synonym=JW4060;db_xref=EcoGene:EG10718 EMBL CDS 4319599 4320663 . - 0 ID=.8902;gene=phnI;locus_tag=b4099;gene_synonym=ECK4092;gene_synonym=JW4060;function=enzyme%3B Central intermediary metabolism: Phosphorus compounds;note=phosphonate metabolism%3B GO_process: GO:0006793 - phosphorus metabolic process;codon_start=1;transl_table=11;product=ribophosphonate triphosphate synthase complex putative catalytic subunit;protein_id=AAC77060.1;db_xref=GI:1790537;db_xref=ASAP:ABE-0013428;db_xref=UniProtKB/Swiss-Prot:P16687;db_xref=EcoGene:EG10718 EMBL gene 4320663 4321247 . - . ID=.8903;gene=phnH;locus_tag=b4100;gene_synonym=ECK4093;gene_synonym=JW4061;db_xref=EcoGene:EG10717 EMBL CDS 4320663 4321247 . - 0 ID=.8904;gene=phnH;locus_tag=b4100;gene_synonym=ECK4093;gene_synonym=JW4061;function=enzyme%3B Central intermediary metabolism: Phosphorus compounds;note=phosphonate metabolism%3B GO_process: GO:0006793 - phosphorus metabolic process;codon_start=1;transl_table=11;product=ribophosphonate triphosphate synthase subunit;protein_id=AAC77061.1;db_xref=GI:1790538;db_xref=ASAP:ABE-0013430;db_xref=UniProtKB/Swiss-Prot:P16686;db_xref=EcoGene:EG10717 EMBL gene 4321244 4321696 . - . ID=.8905;gene=phnG;locus_tag=b4101;gene_synonym=ECK4094;gene_synonym=JW4062;db_xref=EcoGene:EG10716 EMBL CDS 4321244 4321696 . - 0 ID=.8906;gene=phnG;locus_tag=b4101;gene_synonym=ECK4094;gene_synonym=JW4062;function=enzyme%3B Central intermediary metabolism: Phosphorus compounds;note=phosphonate metabolism%3B GO_process: GO:0006793 - phosphorus metabolic process;codon_start=1;transl_table=11;product=ribophosphonate triphosphate synthase subunit;protein_id=AAC77062.1;db_xref=GI:1790539;db_xref=ASAP:ABE-0013433;db_xref=UniProtKB/Swiss-Prot:P16685;db_xref=EcoGene:EG10716 EMBL gene 4321697 4322422 . - . ID=.8907;gene=phnF;locus_tag=b4102;gene_synonym=ECK4095;gene_synonym=JW4063;db_xref=EcoGene:EG10715 EMBL CDS 4321697 4322422 . - 0 ID=.8908;gene=phnF;locus_tag=b4102;gene_synonym=ECK4095;gene_synonym=JW4063;function=putative regulator%3B Not classified;note=putative transcriptional regulator%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006793 - phosphorus metabolic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=putative DNA-binding transcriptional regulator of phosphonate uptake and biodegradation;protein_id=AAC77063.1;db_xref=GI:1790540;db_xref=ASAP:ABE-0013435;db_xref=UniProtKB/Swiss-Prot:P16684;db_xref=EcoGene:EG10715 EMBL gene 4322443 4323230 . - . ID=.8909;gene=phnE;locus_tag=b4104;gene_synonym=ECK4096;gene_synonym=JW4064;pseudo=true;db_xref=EcoGene:EG11283 EMBL biological_region 4322443 4323230 . - 0 ID=.8910;featflags=type:CDS;gene=phnE;locus_tag=b4104;gene_synonym=ECK4096;gene_synonym=JW4064;note=defective phosphonate ABC transporter permease%3Btransport%3B Transport of small molecules: Anions%3B membrane channel protein component of Pn transporter%3B membrane component of ABC superfamily;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0013437;db_xref=ASAP:ABE-0013439;db_xref=UniProtKB/Swiss-Prot:P16683;db_xref=EcoGene:EG11283 EMBL CDS 4322443 4322814 . - 0 Parent=.8910 EMBL CDS 4322805 4323230 . - 0 Parent=.8910 EMBL repeat_region 4323246 4323332 . + . ID=.8913;note=REP324 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 4323336 4324352 . - . ID=.8914;gene=phnD;locus_tag=b4105;gene_synonym=ECK4098;gene_synonym=JW4066;gene_synonym=psiD;db_xref=EcoGene:EG10714 EMBL CDS 4323336 4324352 . - 0 ID=.8915;gene=phnD;locus_tag=b4105;gene_synonym=ECK4098;gene_synonym=JW4066;gene_synonym=psiD;function=transport%3B Transport of small molecules: Anions;note=periplasmic binding protein component of Pn transporter%3B periplasmic binding component of ABC superfamily%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0006793 - phosphorus metabolic process;codon_start=1;transl_table=11;product=phosphonate ABC transporter periplasmic binding protein;protein_id=AAC77066.1;db_xref=GI:1790543;db_xref=ASAP:ABE-0013442;db_xref=UniProtKB/Swiss-Prot:P16682;db_xref=EcoGene:EG10714 EMBL gene 4324377 4325165 . - . ID=.8916;gene=phnC;locus_tag=b4106;gene_synonym=ECK4099;gene_synonym=JW4067;db_xref=EcoGene:EG10713 EMBL CDS 4324377 4325165 . - 0 ID=.8917;gene=phnC;locus_tag=b4106;gene_synonym=ECK4099;gene_synonym=JW4067;function=transport%3B Central intermediary metabolism: Phosphorus compounds;note=ATP-binding component of phosphonate transport%3B ATP-binding component of ABC superfamily%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006793 - phosphorus metabolic process;codon_start=1;transl_table=11;product=phosphonate ABC transporter ATPase;protein_id=AAC77067.1;db_xref=GI:1790544;db_xref=ASAP:ABE-0013444;db_xref=UniProtKB/Swiss-Prot:P16677;db_xref=EcoGene:EG10713 EMBL gene 4325298 4325741 . - . ID=.8918;gene=yjdN;locus_tag=b4107;gene_synonym=ECK4100;gene_synonym=JW4068;gene_synonym=phnB;db_xref=EcoGene:EG10712 EMBL CDS 4325298 4325741 . - 0 ID=.8919;gene=yjdN;locus_tag=b4107;gene_synonym=ECK4100;gene_synonym=JW4068;gene_synonym=phnB;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=metalloprotein superfamily protein;protein_id=AAC77068.1;db_xref=GI:1790546;db_xref=ASAP:ABE-0013447;db_xref=UniProtKB/Swiss-Prot:P16681;db_xref=EcoGene:EG10712 EMBL repeat_region 4325802 4326384 . + . ID=.8920;note=REP325 (repetitive extragenic palindromic) element%3B contains 12 REP sequences EMBL gene 4326399 4326734 . - . ID=.8921;gene=yjdM;locus_tag=b4108;gene_synonym=ECK4101;gene_synonym=JW4069;gene_synonym=phnA;db_xref=EcoGene:EG10711 EMBL CDS 4326399 4326734 . - 0 ID=.8922;gene=yjdM;locus_tag=b4108;gene_synonym=ECK4101;gene_synonym=JW4069;gene_synonym=phnA;codon_start=1;transl_table=11;product=zinc-ribbon family protein;protein_id=AAC77069.1;db_xref=GI:1790547;db_xref=ASAP:ABE-0013451;db_xref=UniProtKB/Swiss-Prot:P0AFJ1;db_xref=EcoGene:EG10711 EMBL gene 4327135 4329363 . + . ID=.8923;gene=crfC;locus_tag=b4109;gene_synonym=ECK4102;gene_synonym=JW4070;gene_synonym=yjdA;db_xref=EcoGene:EG11210 EMBL CDS 4327135 4329363 . + 0 ID=.8924;gene=crfC;locus_tag=b4109;gene_synonym=ECK4102;gene_synonym=JW4070;gene_synonym=yjdA;function=phenotype%3B Not classified;note=putative vimentin;codon_start=1;transl_table=11;product=clamp-binding sister replication fork colocalization protein%2C dynamin-related;protein_id=AAC77070.1;db_xref=GI:1790548;db_xref=ASAP:ABE-0013456;db_xref=UniProtKB/Swiss-Prot:P16694;db_xref=EcoGene:EG11210 EMBL gene 4329360 4330238 . + . ID=.8925;gene=yjcZ;locus_tag=b4110;gene_synonym=ECK4103;gene_synonym=JW5729;db_xref=EcoGene:EG12460 EMBL CDS 4329360 4330238 . + 0 ID=.8926;gene=yjcZ;locus_tag=b4110;gene_synonym=ECK4103;gene_synonym=JW5729;codon_start=1;transl_table=11;product=YjcZ family protein%3B yhjH motility defect suppressor;protein_id=AAC77071.2;db_xref=GI:87082371;db_xref=ASAP:ABE-0013459;db_xref=UniProtKB/Swiss-Prot:P39267;db_xref=EcoGene:EG12460 EMBL gene 4330502 4332004 . + . ID=.8927;gene=proP;locus_tag=b4111;gene_synonym=ECK4104;gene_synonym=JW4072;db_xref=EcoGene:EG11612 EMBL CDS 4330502 4332004 . + 0 ID=.8928;gene=proP;locus_tag=b4111;gene_synonym=ECK4104;gene_synonym=JW4072;function=transport%3B Transport of small molecules: Amino acids%2C amines;note=low-affinity transport system%3B proline permease II%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006561 - proline biosynthetic process%3B GO_process: GO:0006970 - response to osmotic stress;codon_start=1;transl_table=11;product=proline/glycine betaine transporter;protein_id=AAC77072.1;db_xref=GI:1790550;db_xref=ASAP:ABE-0013462;db_xref=UniProtKB/Swiss-Prot:P0C0L7;db_xref=EcoGene:EG11612 EMBL repeat_region 4332014 4332045 . + . ID=.8929;note=REP326 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 4332116 4332205 . + . ID=.8930;gene=pmrR;locus_tag=b4703;gene_synonym=ECK4515;db_xref=EcoGene:EG14499 EMBL CDS 4332116 4332205 . + 0 ID=.8931;gene=pmrR;locus_tag=b4703;gene_synonym=ECK4515;codon_start=1;transl_table=11;product=putative membrane-bound BasS regulator;protein_id=AEN84234.1;db_xref=GI:345297179;db_xref=UniProtKB/Swiss-Prot:G3MTW7;db_xref=EcoGene:EG14499 EMBL gene 4332181 4333272 . - . ID=.8932;gene=basS;locus_tag=b4112;gene_synonym=ECK4105;gene_synonym=JW4073;gene_synonym=pmrB;db_xref=EcoGene:EG11614 EMBL CDS 4332181 4333272 . - 0 ID=.8933;gene=basS;locus_tag=b4112;gene_synonym=ECK4105;gene_synonym=JW4073;gene_synonym=pmrB;function=enzyme%3B RNA synthesis%2C modification%2C DNA transcription;note=sensor protein for basR%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=sensory histidine kinase in two-component regulatory system with BasR;protein_id=AAC77073.1;db_xref=GI:1790551;db_xref=ASAP:ABE-0013464;db_xref=UniProtKB/Swiss-Prot:P30844;db_xref=EcoGene:EG11614 EMBL gene 4333282 4333950 . - . ID=.8934;gene=basR;locus_tag=b4113;gene_synonym=ECK4106;gene_synonym=JW4074;gene_synonym=pmrA;db_xref=EcoGene:EG11615 EMBL CDS 4333282 4333950 . - 0 ID=.8935;gene=basR;locus_tag=b4113;gene_synonym=ECK4106;gene_synonym=JW4074;gene_synonym=pmrA;function=regulator%3B RNA synthesis%2C modification%2C DNA transcription;note=transcriptional regulatory protein%2C member of 2-component regulatory system%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=response regulator in two-component regulatory system with BasS;protein_id=AAC77074.1;db_xref=GI:1790552;db_xref=ASAP:ABE-0013466;db_xref=UniProtKB/Swiss-Prot:P30843;db_xref=EcoGene:EG11615 EMBL gene 4333947 4335590 . - . ID=.8936;gene=eptA;locus_tag=b4114;gene_synonym=ECK4107;gene_synonym=JW5730;gene_synonym=pagB;gene_synonym=pmrC;gene_synonym=yjdB;db_xref=EcoGene:EG11613 EMBL CDS 4333947 4335590 . - 0 ID=.8937;gene=eptA;locus_tag=b4114;gene_synonym=ECK4107;gene_synonym=JW5730;gene_synonym=pagB;gene_synonym=pmrC;gene_synonym=yjdB;note=GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=lipid A phosphoethanolamine transferase;protein_id=AAC77075.2;db_xref=GI:87082372;db_xref=ASAP:ABE-0013469;db_xref=UniProtKB/Swiss-Prot:P30845;db_xref=EcoGene:EG11613 EMBL gene 4335694 4337031 . - . ID=.8938;gene=adiC;locus_tag=b4115;gene_synonym=aniC;gene_synonym=ECK4108;gene_synonym=JW4076;gene_synonym=yjdD;gene_synonym=yjdE;db_xref=EcoGene:EG12462 EMBL CDS 4335694 4337031 . - 0 ID=.8939;gene=adiC;locus_tag=b4115;gene_synonym=aniC;gene_synonym=ECK4108;gene_synonym=JW4076;gene_synonym=yjdD;gene_synonym=yjdE;function=putative transport%3B Not classified;note=putative amino acid/amine transport protein%2C cryptic%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_function: GO:0015496 - putrescine:ornithine antiporter activity;codon_start=1;transl_table=11;product=arginine:agmatine antiporter;protein_id=AAC77076.1;db_xref=GI:2367353;db_xref=ASAP:ABE-0013473;db_xref=UniProtKB/Swiss-Prot:P60061;db_xref=EcoGene:EG12462 EMBL gene 4337168 4337929 . - . ID=.8940;gene=adiY;locus_tag=b4116;gene_synonym=ECK4109;gene_synonym=JW4077;db_xref=EcoGene:EG11966 EMBL CDS 4337168 4337929 . - 0 ID=.8941;gene=adiY;locus_tag=b4116;gene_synonym=ECK4109;gene_synonym=JW4077;function=putative regulator%3B Not classified;note=putative ARAC-type regulatory protein%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=adi system transcriptional activator;protein_id=AAC77077.1;db_xref=GI:1790557;db_xref=ASAP:ABE-0013479;db_xref=UniProtKB/Swiss-Prot:P33234;db_xref=EcoGene:EG11966 EMBL gene 4338254 4340521 . - . ID=.8942;gene=adiA;locus_tag=b4117;gene_synonym=adi;gene_synonym=ECK4110;gene_synonym=JW5731;db_xref=EcoGene:EG11501 EMBL CDS 4338254 4340521 . - 0 ID=.8943;gene=adiA;locus_tag=b4117;gene_synonym=adi;gene_synonym=ECK4110;gene_synonym=JW5731;ec_number=4.1.1.19;function=enzyme%3B Degradation of small molecules: Amino acids;experiment=N-terminus verified by Edman degradation: PMID 4204273;note=GO_process: GO:0009063 - cellular amino acid catabolic process;codon_start=1;transl_table=11;product=arginine decarboxylase;protein_id=AAC77078.2;db_xref=GI:221142684;db_xref=ASAP:ABE-0013483;db_xref=UniProtKB/Swiss-Prot:P28629;db_xref=EcoGene:EG11501 EMBL gene 4340720 4341628 . - . ID=.8944;gene=melR;locus_tag=b4118;gene_synonym=ECK4111;gene_synonym=JW4079;db_xref=EcoGene:EG11230 EMBL CDS 4340720 4341628 . - 0 ID=.8945;gene=melR;locus_tag=b4118;gene_synonym=ECK4111;gene_synonym=JW4079;function=regulator%3B Degradation of small molecules: Carbon compounds;note=regulator of melibiose operon%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=melibiose operon transcriptional regulator%3B autoregulator;protein_id=AAC77079.1;db_xref=GI:1790559;db_xref=ASAP:ABE-0013486;db_xref=UniProtKB/Swiss-Prot:P0ACH8;db_xref=EcoGene:EG11230 EMBL gene 4341911 4343266 . + . ID=.8946;gene=melA;locus_tag=b4119;gene_synonym=ECK4112;gene_synonym=JW4080;gene_synonym=mel-7;db_xref=EcoGene:EG10577 EMBL CDS 4341911 4343266 . + 0 ID=.8947;gene=melA;locus_tag=b4119;gene_synonym=ECK4112;gene_synonym=JW4080;gene_synonym=mel-7;ec_number=3.2.1.22;function=enzyme%3B Degradation of small molecules: Carbon compounds;experiment=N-terminus verified by Edman degradation: PMID 2831880%2C12374803;note=alpha-galactosidase%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0009435 - NAD biosynthetic process;codon_start=1;transl_table=11;product=alpha-galactosidase%2C NAD(P)-binding;protein_id=AAC77080.1;db_xref=GI:1790560;db_xref=ASAP:ABE-0013493;db_xref=UniProtKB/Swiss-Prot:P06720;db_xref=EcoGene:EG10577 EMBL gene 4343369 4344790 . + . ID=.8948;gene=melB;locus_tag=b4120;gene_synonym=ECK4113;gene_synonym=JW4081;gene_synonym=mel-4;db_xref=EcoGene:EG10578 EMBL CDS 4343369 4344790 . + 0 ID=.8949;gene=melB;locus_tag=b4120;gene_synonym=ECK4113;gene_synonym=JW4081;gene_synonym=mel-4;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=melibiose permease II%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=melibiose:sodium symporter;protein_id=AAC77081.2;db_xref=GI:345297180;db_xref=ASAP:ABE-0013495;db_xref=UniProtKB/Swiss-Prot:P02921;db_xref=EcoGene:EG10578 EMBL repeat_region 4344815 4344909 . + . ID=.8950;note=RIP327 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 4344929 4345558 . - . ID=.8951;gene=yjdF;locus_tag=b4121;gene_synonym=ECK4114;gene_synonym=JW4082;db_xref=EcoGene:EG12463 EMBL CDS 4344929 4345558 . - 0 ID=.8952;gene=yjdF;locus_tag=b4121;gene_synonym=ECK4114;gene_synonym=JW4082;codon_start=1;transl_table=11;product=DUF2238 family inner membrane protein;protein_id=AAC77082.1;db_xref=GI:1790562;db_xref=ASAP:ABE-0013498;db_xref=UniProtKB/Swiss-Prot:P39270;db_xref=EcoGene:EG12463 EMBL gene 4345680 4347326 . - . ID=.8953;gene=fumB;locus_tag=b4122;gene_synonym=ECK4115;gene_synonym=JW4083;db_xref=EcoGene:EG10357 EMBL CDS 4345680 4347326 . - 0 ID=.8954;gene=fumB;locus_tag=b4122;gene_synonym=ECK4115;gene_synonym=JW4083;ec_number=4.2.1.2;function=enzyme%3B Energy metabolism%2C carbon: TCA cycle;note=fumarase B%3D fumarate hydratase Class I%3B anaerobic isozyme%3B GO_process: GO:0006099 - tricarboxylic acid cycle%3B GO_process: GO:0006113 - fermentation%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=anaerobic class I fumarate hydratase (fumarase B);protein_id=AAC77083.1;db_xref=GI:1790564;db_xref=ASAP:ABE-0013501;db_xref=UniProtKB/Swiss-Prot:P14407;db_xref=EcoGene:EG10357 EMBL gene 4347404 4348744 . - . ID=.8955;gene=dcuB;locus_tag=b4123;gene_synonym=ECK4116;gene_synonym=genF;gene_synonym=JW4084;db_xref=EcoGene:EG10006 EMBL CDS 4347404 4348744 . - 0 ID=.8956;gene=dcuB;locus_tag=b4123;gene_synonym=ECK4116;gene_synonym=genF;gene_synonym=JW4084;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=anaerobic dicarboxylate transport%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=C4-dicarboxylate transporter%2C anaerobic%3B DcuS co-sensor;protein_id=AAC77084.1;db_xref=GI:1790565;db_xref=ASAP:ABE-0013503;db_xref=UniProtKB/Swiss-Prot:P0ABN9;db_xref=EcoGene:EG10006 EMBL gene 4349315 4350034 . - . ID=.8957;gene=dcuR;locus_tag=b4124;gene_synonym=ECK4117;gene_synonym=JW4085;gene_synonym=yjdG;db_xref=EcoGene:EG12464 EMBL CDS 4349315 4350034 . - 0 ID=.8958;gene=dcuR;locus_tag=b4124;gene_synonym=ECK4117;gene_synonym=JW4085;gene_synonym=yjdG;function=putative regulator%3B Not classified;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=response regulator in two-component regulatory system with DcuS;protein_id=AAC77085.1;db_xref=GI:1790566;db_xref=ASAP:ABE-0013507;db_xref=UniProtKB/Swiss-Prot:P0AD01;db_xref=EcoGene:EG12464 EMBL gene 4350031 4351662 . - . ID=.8959;gene=dcuS;locus_tag=b4125;gene_synonym=ECK4118;gene_synonym=JW4086;gene_synonym=yjdH;db_xref=EcoGene:EG12465 EMBL CDS 4350031 4351662 . - 0 ID=.8960;gene=dcuS;locus_tag=b4125;gene_synonym=ECK4118;gene_synonym=JW4086;gene_synonym=yjdH;function=putative regulator%3B Not classified;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=sensory histidine kinase in two-component regulatory system with DcuR%2C regulator of anaerobic fumarate respiration;protein_id=AAC77086.1;db_xref=GI:1790567;db_xref=ASAP:ABE-0013509;db_xref=UniProtKB/Swiss-Prot:P0AEC8;db_xref=EcoGene:EG12465 EMBL gene 4351843 4352073 . + . ID=.8961;gene=yjdI;locus_tag=b4126;gene_synonym=ECK4119;gene_synonym=JW4087;db_xref=EcoGene:EG12466 EMBL CDS 4351843 4352073 . + 0 ID=.8962;gene=yjdI;locus_tag=b4126;gene_synonym=ECK4119;gene_synonym=JW4087;codon_start=1;transl_table=11;product=putative 4Fe-4S mono-cluster protein;protein_id=AAC77087.1;db_xref=GI:1790568;db_xref=ASAP:ABE-0013513;db_xref=UniProtKB/Swiss-Prot:P0AF59;db_xref=EcoGene:EG12466 EMBL gene 4352085 4352357 . + . ID=.8963;gene=yjdJ;locus_tag=b4127;gene_synonym=ECK4120;gene_synonym=JW4088;db_xref=EcoGene:EG12467 EMBL CDS 4352085 4352357 . + 0 ID=.8964;gene=yjdJ;locus_tag=b4127;gene_synonym=ECK4120;gene_synonym=JW4088;codon_start=1;transl_table=11;product=GNAT family putative N-acetyltransferase;protein_id=AAC77088.1;db_xref=GI:1790569;db_xref=ASAP:ABE-0013515;db_xref=UniProtKB/Swiss-Prot:P39274;db_xref=EcoGene:EG12467 EMBL gene 4352584 4352880 . + . ID=.8965;gene=ghoS;locus_tag=b4128;gene_synonym=ECK4121;gene_synonym=JW4089;gene_synonym=yjdK;db_xref=EcoGene:EG12468 EMBL CDS 4352584 4352880 . + 0 ID=.8966;gene=ghoS;locus_tag=b4128;gene_synonym=ECK4121;gene_synonym=JW4089;gene_synonym=yjdK;codon_start=1;transl_table=11;product=antitoxin of GhoTS toxin-antitoxin pair%3B endonuclease for ghoT mRNA;protein_id=AAC77089.1;db_xref=GI:1790570;db_xref=ASAP:ABE-0013518;db_xref=UniProtKB/Swiss-Prot:P0AF61;db_xref=EcoGene:EG12468 EMBL gene 4352908 4353081 . + . ID=.8967;gene=ghoT;locus_tag=b4559;gene_synonym=ECK4122;gene_synonym=JW5732;gene_synonym=yjdO;db_xref=EcoGene:EG14342 EMBL CDS 4352908 4353081 . + 0 ID=.8968;gene=ghoT;locus_tag=b4559;gene_synonym=ECK4122;gene_synonym=JW5732;gene_synonym=yjdO;note=GO_component: GO:0016021 - integral to membrane;codon_start=1;transl_table=11;product=toxin of GhoTS toxin-antitoxin pair%3B membrane-lytic protein%3B stimulator of persister cell formation;protein_id=ABD18711.1;db_xref=GI:87082373;db_xref=ASAP:ABE-0285080;db_xref=UniProtKB/Swiss-Prot:P64646;db_xref=EcoGene:EG14342 EMBL gene 4353200 4354717 . - . ID=.8969;gene=lysU;locus_tag=b4129;gene_synonym=ECK4123;gene_synonym=JW4090;db_xref=EcoGene:EG10553 EMBL CDS 4353200 4354717 . - 0 ID=.8970;gene=lysU;locus_tag=b4129;gene_synonym=ECK4123;gene_synonym=JW4090;ec_number=6.1.1.6;function=enzyme%3B Aminoacyl tRNA synthetases%2C tRNA modification;note=lysine tRNA synthetase%2C inducible%3B heat shock protein%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006418 - tRNA aminoacylation for protein translation;codon_start=1;transl_table=11;product=lysine tRNA synthetase%2C inducible;protein_id=AAC77090.1;db_xref=GI:1790571;db_xref=ASAP:ABE-0013520;db_xref=UniProtKB/Swiss-Prot:P0A8N5;db_xref=EcoGene:EG10553 EMBL gene 4354954 4356411 . - . ID=.8971;gene=dtpC;locus_tag=b4130;gene_synonym=ECK4124;gene_synonym=JW4091;gene_synonym=yjdL;db_xref=EcoGene:EG12469 EMBL CDS 4354954 4356411 . - 0 ID=.8972;gene=dtpC;locus_tag=b4130;gene_synonym=ECK4124;gene_synonym=JW4091;gene_synonym=yjdL;function=transport%3B Not classified;note=putative peptide transporter%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=dipeptide and tripeptide permease;protein_id=AAC77091.1;db_xref=GI:1790572;db_xref=ASAP:ABE-0013524;db_xref=UniProtKB/Swiss-Prot:P39276;db_xref=EcoGene:EG12469 EMBL gene 4356470 4358617 . - . ID=.8973;gene=cadA;locus_tag=b4131;gene_synonym=ECK4125;gene_synonym=JW4092;gene_synonym=ldcI;db_xref=EcoGene:EG10131 EMBL CDS 4356470 4358617 . - 0 ID=.8974;gene=cadA;locus_tag=b4131;gene_synonym=ECK4125;gene_synonym=JW4092;gene_synonym=ldcI;ec_number=4.1.1.18;function=enzyme%3B Degradation of small molecules: Amino acids;experiment=N-terminus verified by Edman degradation: PMID 4204273%2C9226257;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009063 - cellular amino acid catabolic process%3B GO_process: GO:0009089 - lysine biosynthetic process via diaminopimelate;codon_start=1;transl_table=11;product=lysine decarboxylase%2C acid-inducible;protein_id=AAC77092.1;db_xref=GI:1790573;db_xref=ASAP:ABE-0013526;db_xref=UniProtKB/Swiss-Prot:P0A9H3;db_xref=EcoGene:EG10131 EMBL gene 4358697 4360031 . - . ID=.8975;gene=cadB;locus_tag=b4132;gene_synonym=ECK4126;gene_synonym=JW4093;db_xref=EcoGene:EG10132 EMBL CDS 4358697 4360031 . - 0 ID=.8976;gene=cadB;locus_tag=b4132;gene_synonym=ECK4126;gene_synonym=JW4093;function=transport%3B Transport of small molecules: Amino acids%2C amines;note=transport of lysine/cadaverine%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009089 - lysine biosynthetic process via diaminopimelate;codon_start=1;transl_table=11;product=putative lysine/cadaverine transporter;protein_id=AAC77093.1;db_xref=GI:1790575;db_xref=ASAP:ABE-0013530;db_xref=UniProtKB/Swiss-Prot:P0AAE8;db_xref=EcoGene:EG10132 EMBL gene 4360396 4361934 . - . ID=.8977;gene=cadC;locus_tag=b4133;gene_synonym=ECK4127;gene_synonym=JW4094;db_xref=EcoGene:EG10133 EMBL CDS 4360396 4361934 . - 0 ID=.8978;gene=cadC;locus_tag=b4133;gene_synonym=ECK4127;gene_synonym=JW4094;function=regulator%3B Degradation of small molecules: Amino acids;note=transcriptional activator of cad operon%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0009063 - cellular amino acid catabolic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=cadBA operon transcriptional activator;protein_id=AAC77094.1;db_xref=GI:1790576;db_xref=ASAP:ABE-0013532;db_xref=UniProtKB/Swiss-Prot:P23890;db_xref=EcoGene:EG10133 EMBL gene 4362191 4362353 . - . ID=.8979;gene=yjdQ;locus_tag=b4654;gene_synonym=ECK4457;pseudo=true;db_xref=EcoGene:EG14452 EMBL biological_region 4362191 4362353 . - 0 ID=.8980;featflags=type:CDS;gene=yjdQ;locus_tag=b4654;gene_synonym=ECK4457;note=pseudogene%2C P4-like integrase remnant;pseudo=true;codon_start=1;transl_table=11;db_xref=EcoGene:EG14452 EMBL CDS 4362191 4362271 . - 0 Parent=.8980 EMBL CDS 4362270 4362353 . - 0 Parent=.8980 EMBL gene 4362551 4362626 . - . ID=.8983;gene=pheU;locus_tag=b4134;gene_synonym=ECK4128;gene_synonym=JWR0111;gene_synonym=pheR;gene_synonym=pheW;db_xref=EcoGene:EG30064 EMBL tRNA 4362551 4362626 . - . ID=.8984;gene=pheU;locus_tag=b4134;gene_synonym=ECK4128;gene_synonym=JWR0111;gene_synonym=pheR;gene_synonym=pheW;product=tRNA-Phe;note=anticodon: GAA;db_xref=ASAP:ABE-0013535;db_xref=EcoGene:EG30064 EMBL gene 4362733 4363308 . - . ID=.8985;gene=yjdC;locus_tag=b4135;gene_synonym=cutA3;gene_synonym=ECK4129;gene_synonym=JW5733;db_xref=EcoGene:EG12176 EMBL CDS 4362733 4363308 . - 0 ID=.8986;gene=yjdC;locus_tag=b4135;gene_synonym=cutA3;gene_synonym=ECK4129;gene_synonym=JW5733;note=GO_process: GO:0006355 - regulation of transcription%2C DNA-dependent;codon_start=1;transl_table=11;product=putative transcriptional regulator;protein_id=AAC77095.2;db_xref=GI:87082374;db_xref=ASAP:ABE-0013537;db_xref=UniProtKB/Swiss-Prot:P0ACU7;db_xref=EcoGene:EG12176 EMBL gene 4363345 4365042 . - . ID=.8987;gene=dsbD;locus_tag=b4136;gene_synonym=cutA2;gene_synonym=cycZ;gene_synonym=dipZ;gene_synonym=ECK4130;gene_synonym=htrI;gene_synonym=JW5734;db_xref=EcoGene:EG12178 EMBL CDS 4363345 4365042 . - 0 ID=.8988;gene=dsbD;locus_tag=b4136;gene_synonym=cutA2;gene_synonym=cycZ;gene_synonym=dipZ;gene_synonym=ECK4130;gene_synonym=htrI;gene_synonym=JW5734;ec_number=1.8.1.8;function=putative enzyme%3B Central intermediary metabolism: Sulfur metabolism;note=thiol:disulfide interchange protein%3B copper tolerance%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006790 - sulfur metabolic process%3B GO_process: GO:0017004 - cytochrome complex assembly;codon_start=1;transl_table=11;product=thiol:disulfide interchange protein and activator of DsbC;protein_id=AAC77096.1;db_xref=GI:1790578;db_xref=ASAP:ABE-0013539;db_xref=UniProtKB/Swiss-Prot:P36655;db_xref=EcoGene:EG12178 EMBL gene 4365018 4365356 . - . ID=.8989;gene=cutA;locus_tag=b4137;gene_synonym=cutA1;gene_synonym=cycY;gene_synonym=ECK4131;gene_synonym=JW4097;db_xref=EcoGene:EG12177 EMBL CDS 4365018 4365356 . - 0 ID=.8990;gene=cutA;locus_tag=b4137;gene_synonym=cutA1;gene_synonym=cycY;gene_synonym=ECK4131;gene_synonym=JW4097;function=phenotype%3B Adaptations%2C atypical conditions;note=divalent cation tolerance protein%3B cytochrome c biogenesis%3B GO_process: GO:0017004 - cytochrome complex assembly;codon_start=1;transl_table=11;product=divalent-cation tolerance protein%2C copper sensitivity;protein_id=AAC77097.1;db_xref=GI:1790579;db_xref=ASAP:ABE-0013544;db_xref=UniProtKB/Swiss-Prot:P69488;db_xref=EcoGene:EG12177 EMBL gene 4365472 4366773 . - . ID=.8991;gene=dcuA;locus_tag=b4138;gene_synonym=ECK4132;gene_synonym=genA;gene_synonym=JW5735;db_xref=EcoGene:EG11225 EMBL CDS 4365472 4366773 . - 0 ID=.8992;gene=dcuA;locus_tag=b4138;gene_synonym=ECK4132;gene_synonym=genA;gene_synonym=JW5735;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=anaerobic dicarboxylate transport%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=C4-dicarboxylate antiporter;protein_id=AAC77098.1;db_xref=GI:1790580;db_xref=ASAP:ABE-0013546;db_xref=UniProtKB/Swiss-Prot:P0ABN5;db_xref=EcoGene:EG11225 EMBL gene 4366891 4368327 . - . ID=.8993;gene=aspA;locus_tag=b4139;gene_synonym=ECK4133;gene_synonym=JW4099;db_xref=EcoGene:EG10095 EMBL CDS 4366891 4368327 . - 0 ID=.8994;gene=aspA;locus_tag=b4139;gene_synonym=ECK4133;gene_synonym=JW4099;ec_number=4.3.1.1;function=enzyme%3B Central intermediary metabolism: Pool%2C multipurpose conversions;note=aspartate ammonia-lyase (aspartase)%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006520 - cellular amino acid metabolic process%3B GO_process: GO:0006529 - asparagine biosynthetic process%3B GO_process: GO:0009089 - lysine biosynthetic process via diaminopimelate;codon_start=1;transl_table=11;product=aspartate ammonia-lyase;protein_id=AAC77099.2;db_xref=GI:87082375;db_xref=ASAP:ABE-0013551;db_xref=UniProtKB/Swiss-Prot:P0AC38;db_xref=EcoGene:EG10095 EMBL gene 4368664 4369140 . + . ID=.8995;gene=fxsA;locus_tag=b4140;gene_synonym=ECK4134;gene_synonym=JW4100;gene_synonym=yjeG;db_xref=EcoGene:EG12382 EMBL CDS 4368664 4369140 . + 0 ID=.8996;gene=fxsA;locus_tag=b4140;gene_synonym=ECK4134;gene_synonym=JW4100;gene_synonym=yjeG;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=suppressor of F exclusion of phage T7;protein_id=AAC77100.2;db_xref=GI:87082376;db_xref=ASAP:ABE-0013557;db_xref=UniProtKB/Swiss-Prot:P37147;db_xref=EcoGene:EG12382 EMBL gene 4369156 4370412 . - . ID=.8997;gene=yjeH;locus_tag=b4141;gene_synonym=ECK4135;gene_synonym=JW4101;db_xref=EcoGene:EG12470 EMBL CDS 4369156 4370412 . - 0 ID=.8998;gene=yjeH;locus_tag=b4141;gene_synonym=ECK4135;gene_synonym=JW4101;function=putative transport%3B Not classified;note=putative transport;codon_start=1;transl_table=11;product=putative transporter;protein_id=AAC77101.1;db_xref=GI:1790584;db_xref=ASAP:ABE-0013559;db_xref=UniProtKB/Swiss-Prot:P39277;db_xref=EcoGene:EG12470 EMBL gene 4370688 4370981 . + . ID=.8999;gene=groS;locus_tag=b4142;gene_synonym=ECK4136;gene_synonym=groES;gene_synonym=JW4102;gene_synonym=mopB;gene_synonym=TabB;db_xref=EcoGene:EG10600 EMBL CDS 4370688 4370981 . + 0 ID=.9000;gene=groS;locus_tag=b4142;gene_synonym=ECK4136;gene_synonym=groES;gene_synonym=JW4102;gene_synonym=mopB;gene_synonym=TabB;function=factor%3B Chaperones;experiment=N-terminus verified by Edman degradation: PMID 8506346%2C8740179%2C9298646%2C9600841;note=GroES%2C 10 Kd chaperone binds to Hsp60 in pres. Mg-ATP%2C suppressing its ATPase activity%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=Cpn10 chaperonin GroES%2C small subunit of GroESL;protein_id=AAC77102.1;db_xref=GI:1790585;db_xref=ASAP:ABE-0013566;db_xref=UniProtKB/Swiss-Prot:P0A6F9;db_xref=EcoGene:EG10600 EMBL gene 4371025 4372671 . + . ID=.9001;gene=groL;locus_tag=b4143;gene_synonym=ECK4137;gene_synonym=groEL;gene_synonym=JW4103;gene_synonym=mopA;db_xref=EcoGene:EG10599 EMBL CDS 4371025 4372671 . + 0 ID=.9002;gene=groL;locus_tag=b4143;gene_synonym=ECK4137;gene_synonym=groEL;gene_synonym=JW4103;gene_synonym=mopA;function=factor%3B Chaperones;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=Cpn60 chaperonin GroEL%2C large subunit of GroESL;protein_id=AAC77103.1;db_xref=GI:1790586;db_xref=ASAP:ABE-0013568;db_xref=UniProtKB/Swiss-Prot:P0A6F5;db_xref=EcoGene:EG10599 EMBL gene 4372809 4373162 . + . ID=.9003;gene=yjeI;locus_tag=b4144;gene_synonym=ECK4138;gene_synonym=JW5736;db_xref=EcoGene:EG12471 EMBL CDS 4372809 4373162 . + 0 ID=.9004;gene=yjeI;locus_tag=b4144;gene_synonym=ECK4138;gene_synonym=JW5736;codon_start=1;transl_table=11;product=DUF4156 family lipoprotein;protein_id=AAC77104.2;db_xref=GI:87082377;db_xref=ASAP:ABE-0013572;db_xref=UniProtKB/Swiss-Prot:P0AF70;db_xref=EcoGene:EG12471 EMBL repeat_region 4373197 4373295 . + . ID=.9005;note=RIP328 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 4373365 4374234 . - . ID=.9006;gene=yjeJ;locus_tag=b4145;gene_synonym=ECK4139;gene_synonym=JW4105;db_xref=EcoGene:EG12472 EMBL CDS 4373365 4374234 . - 0 ID=.9007;gene=yjeJ;locus_tag=b4145;gene_synonym=ECK4139;gene_synonym=JW4105;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC77105.1;db_xref=GI:1790588;db_xref=ASAP:ABE-0013575;db_xref=UniProtKB/Swiss-Prot:P39279;db_xref=EcoGene:EG12472 EMBL repeat_region 4374498 4374596 . + . ID=.9008;note=RIP329 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 4374629 4375657 . - . ID=.9009;gene=epmB;locus_tag=b4146;gene_synonym=ECK4140;gene_synonym=JW4106;gene_synonym=yjeK;db_xref=EcoGene:EG12473 EMBL CDS 4374629 4375657 . - 0 ID=.9010;gene=epmB;locus_tag=b4146;gene_synonym=ECK4140;gene_synonym=JW4106;gene_synonym=yjeK;function=enzyme%3B Protein modification;codon_start=1;transl_table=11;product=EF-P-Lys34 lysylation protein%3B weak lysine 2%2C3-aminomutase;protein_id=AAC77106.1;db_xref=GI:1790589;db_xref=ASAP:ABE-0013580;db_xref=UniProtKB/Swiss-Prot:P39280;db_xref=EcoGene:EG12473 EMBL gene 4375699 4376265 . + . ID=.9011;gene=efp;locus_tag=b4147;gene_synonym=ECK4141;gene_synonym=JW4107;db_xref=EcoGene:EG12099 EMBL CDS 4375699 4376265 . + 0 ID=.9012;gene=efp;locus_tag=b4147;gene_synonym=ECK4141;gene_synonym=JW4107;function=factor%3B Proteins - translation and modification;note=elongation factor P (EF-P)%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=polyproline-specific translation elongation factor EF-P;protein_id=AAC77107.1;db_xref=GI:1790590;db_xref=ASAP:ABE-0013583;db_xref=UniProtKB/Swiss-Prot:P0A6N4;db_xref=EcoGene:EG12099 EMBL gene 4376317 4376442 . + . ID=.9013;gene=ecnA;locus_tag=b4410;gene_synonym=ECK4142;gene_synonym=JW5737;db_xref=EcoGene:EG14372 EMBL CDS 4376317 4376442 . + 0 ID=.9014;gene=ecnA;locus_tag=b4410;gene_synonym=ECK4142;gene_synonym=JW5737;note=entericidin A%3B antidote to lipoprotein entericidin B%3B component of a chromosomally encoded addiction module;codon_start=1;transl_table=11;product=entericidin A membrane lipoprotein%2C antidote entericidin B;protein_id=AAT48241.1;db_xref=GI:48994998;db_xref=ASAP:ABE-0047210;db_xref=UniProtKB/Swiss-Prot:P0ADB4;db_xref=EcoGene:EG14372 EMBL gene 4376553 4376699 . + . ID=.9015;gene=ecnB;locus_tag=b4411;gene_synonym=ECK4143;gene_synonym=JW4108;gene_synonym=yjeU;db_xref=EcoGene:EG14345 EMBL CDS 4376553 4376699 . + 0 ID=.9016;gene=ecnB;locus_tag=b4411;gene_synonym=ECK4143;gene_synonym=JW4108;gene_synonym=yjeU;note=entericidin B%3B bacteriolytic lipoprotein%3B component of a chromosomally encoded addiction module;codon_start=1;transl_table=11;product=entericidin B membrane lipoprotein;protein_id=AAT48242.1;db_xref=GI:48994999;db_xref=ASAP:ABE-0047211;db_xref=UniProtKB/Swiss-Prot:P0ADB7;db_xref=EcoGene:EG14345 EMBL gene 4376875 4377192 . + . ID=.9017;gene=sugE;locus_tag=b4148;gene_synonym=ECK4144;gene_synonym=JW5738;db_xref=EcoGene:EG11616 EMBL CDS 4376875 4377192 . + 0 ID=.9018;gene=sugE;locus_tag=b4148;gene_synonym=ECK4144;gene_synonym=JW5738;function=putative factor%3B Not classified;note=suppresses groEL%2C may be chaperone%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=multidrug efflux system protein;protein_id=AAC77108.2;db_xref=GI:87082378;db_xref=ASAP:ABE-0013588;db_xref=UniProtKB/Swiss-Prot:P69937;db_xref=EcoGene:EG11616 EMBL gene 4377189 4377722 . - . ID=.9019;gene=blc;locus_tag=b4149;gene_synonym=ECK4145;gene_synonym=JW4110;gene_synonym=yjeL;db_xref=EcoGene:EG12474 EMBL CDS 4377189 4377722 . - 0 ID=.9020;gene=blc;locus_tag=b4149;gene_synonym=ECK4145;gene_synonym=JW4110;gene_synonym=yjeL;function=membrane%3B Macromolecule synthesis%2C modification: Lipoprotein;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane;codon_start=1;transl_table=11;product=outer membrane lipoprotein cell division and growth lipocalin;protein_id=AAC77109.1;db_xref=GI:1790592;db_xref=ASAP:ABE-0013590;db_xref=UniProtKB/Swiss-Prot:P0A901;db_xref=EcoGene:EG12474 EMBL gene 4377811 4378944 . - . ID=.9021;gene=ampC;locus_tag=b4150;gene_synonym=ampA;gene_synonym=ECK4146;gene_synonym=JW4111;db_xref=EcoGene:EG10040 EMBL CDS 4377811 4378944 . - 0 ID=.9022;gene=ampC;locus_tag=b4150;gene_synonym=ampA;gene_synonym=ECK4146;gene_synonym=JW4111;ec_number=3.5.2.6;function=enzyme%3B Drug/analog sensitivity;note=beta-lactamase%3B penicillin resistance%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0009252 - peptidoglycan biosynthetic process%3B GO_process: GO:0042493 - response to drug;codon_start=1;transl_table=11;product=penicillin-binding protein%3B beta-lactamase%2C intrinsically weak;protein_id=AAC77110.1;db_xref=GI:1790593;db_xref=ASAP:ABE-0013592;db_xref=UniProtKB/Swiss-Prot:P00811;db_xref=EcoGene:EG10040 EMBL gene 4379007 4379366 . - . ID=.9023;gene=frdD;locus_tag=b4151;gene_synonym=ECK4147;gene_synonym=JW4112;db_xref=EcoGene:EG10333 EMBL CDS 4379007 4379366 . - 0 ID=.9024;gene=frdD;locus_tag=b4151;gene_synonym=ECK4147;gene_synonym=JW4112;function=enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;note=fumarate reductase%2C anaerobic%2C membrane anchor polypeptide%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006113 - fermentation%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=fumarate reductase (anaerobic)%2C membrane anchor subunit;protein_id=AAC77111.1;db_xref=GI:1790594;db_xref=ASAP:ABE-0013595;db_xref=UniProtKB/Swiss-Prot:P0A8Q3;db_xref=EcoGene:EG10333 EMBL gene 4379377 4379772 . - . ID=.9025;gene=frdC;locus_tag=b4152;gene_synonym=ECK4148;gene_synonym=JW4113;db_xref=EcoGene:EG10332 EMBL CDS 4379377 4379772 . - 0 ID=.9026;gene=frdC;locus_tag=b4152;gene_synonym=ECK4148;gene_synonym=JW4113;function=enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;note=fumarate reductase%2C anaerobic%2C membrane anchor polypeptide%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006113 - fermentation%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=fumarate reductase (anaerobic)%2C membrane anchor subunit;protein_id=AAC77112.1;db_xref=GI:1790595;db_xref=ASAP:ABE-0013598;db_xref=UniProtKB/Swiss-Prot:P0A8Q0;db_xref=EcoGene:EG10332 EMBL gene 4379783 4380517 . - . ID=.9027;gene=frdB;locus_tag=b4153;gene_synonym=ECK4149;gene_synonym=JW4114;db_xref=EcoGene:EG10331 EMBL CDS 4379783 4380517 . - 0 ID=.9028;gene=frdB;locus_tag=b4153;gene_synonym=ECK4149;gene_synonym=JW4114;function=enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;note=fumarate reductase%2C anaerobic%2C iron-sulfur protein subunit%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006113 - fermentation%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=fumarate reductase (anaerobic)%2C Fe-S subunit;protein_id=AAC77113.1;db_xref=GI:1790596;db_xref=ASAP:ABE-0013602;db_xref=UniProtKB/Swiss-Prot:P0AC47;db_xref=EcoGene:EG10331 EMBL gene 4380510 4382318 . - . ID=.9029;gene=frdA;locus_tag=b4154;gene_synonym=ECK4150;gene_synonym=JW4115;db_xref=EcoGene:EG10330 EMBL CDS 4380510 4382318 . - 0 ID=.9030;gene=frdA;locus_tag=b4154;gene_synonym=ECK4150;gene_synonym=JW4115;function=enzyme%3B Energy metabolism%2C carbon: Anaerobic respiration;note=fumarate reductase%2C anaerobic%2C flavoprotein subunit%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006113 - fermentation%3B GO_process: GO:0009061 - anaerobic respiration;codon_start=1;transl_table=11;product=anaerobic fumarate reductase catalytic and NAD/flavoprotein subunit;protein_id=AAC77114.1;db_xref=GI:1790597;db_xref=ASAP:ABE-0013604;db_xref=UniProtKB/Swiss-Prot:P00363;db_xref=EcoGene:EG10330 EMBL gene 4382643 4383620 . + . ID=.9031;gene=epmA;locus_tag=b4155;gene_synonym=ECK4151;gene_synonym=genX;gene_synonym=JW4116;gene_synonym=poxA;gene_synonym=yjeA;db_xref=EcoGene:EG11211 EMBL CDS 4382643 4383620 . + 0 ID=.9032;gene=epmA;locus_tag=b4155;gene_synonym=ECK4151;gene_synonym=genX;gene_synonym=JW4116;gene_synonym=poxA;gene_synonym=yjeA;function=enzyme%3B Protein modification;note=putative lysyl-tRNA synthetase%3B GO_process: GO:0006418 - tRNA aminoacylation for protein translation;codon_start=1;transl_table=11;product=Elongation Factor P Lys34 lysyltransferase;protein_id=AAC77115.2;db_xref=GI:87082379;db_xref=ASAP:ABE-0013610;db_xref=UniProtKB/Swiss-Prot:P0A8N7;db_xref=EcoGene:EG11211 EMBL gene 4383839 4385341 . + . ID=.9033;gene=yjeM;locus_tag=b4156;gene_synonym=ECK4152;gene_synonym=JW5739;db_xref=EcoGene:EG12475 EMBL CDS 4383839 4385341 . + 0 ID=.9034;gene=yjeM;locus_tag=b4156;gene_synonym=ECK4152;gene_synonym=JW5739;function=putative transport%3B Not classified;note=putative transport%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative transporter;protein_id=AAC77116.2;db_xref=GI:87082380;db_xref=ASAP:ABE-0013613;db_xref=UniProtKB/Swiss-Prot:P39282;db_xref=EcoGene:EG12475 EMBL gene 4385393 4385707 . + . ID=.9035;gene=yjeN;locus_tag=b4157;gene_synonym=ECK4153;gene_synonym=JW4118;db_xref=EcoGene:EG12476 EMBL CDS 4385393 4385707 . + 0 ID=.9036;gene=yjeN;locus_tag=b4157;gene_synonym=ECK4153;gene_synonym=JW4118;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC77117.1;db_xref=GI:1790601;db_xref=ASAP:ABE-0013617;db_xref=UniProtKB/Swiss-Prot:P39283;db_xref=EcoGene:EG12476 EMBL gene 4385704 4386018 . + . ID=.9037;gene=yjeO;locus_tag=b4158;gene_synonym=ECK4154;gene_synonym=JW4119;db_xref=EcoGene:EG12477 EMBL CDS 4385704 4386018 . + 0 ID=.9038;gene=yjeO;locus_tag=b4158;gene_synonym=ECK4154;gene_synonym=JW4119;codon_start=1;transl_table=11;product=inner membrane protein;protein_id=AAC77118.1;db_xref=GI:1790602;db_xref=ASAP:ABE-0013619;db_xref=UniProtKB/Swiss-Prot:P39284;db_xref=EcoGene:EG12477 EMBL repeat_region 4386019 4386038 . + . ID=.9039;note=REP330 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 4386047 4389370 . - . ID=.9040;gene=mscM;locus_tag=b4159;gene_synonym=ECK4155;gene_synonym=JW4120;gene_synonym=yjeP;db_xref=EcoGene:EG12478 EMBL CDS 4386047 4389370 . - 0 ID=.9041;gene=mscM;locus_tag=b4159;gene_synonym=ECK4155;gene_synonym=JW4120;gene_synonym=yjeP;function=transport%3B ions;note=putative periplasmic binding protein%3B GO_component: GO:0042597 - periplasmic space;codon_start=1;transl_table=11;product=mechanosensitive channel protein%2C miniconductance;protein_id=AAC77119.1;db_xref=GI:2367355;db_xref=ASAP:ABE-0013621;db_xref=UniProtKB/Swiss-Prot:P39285;db_xref=EcoGene:EG12478 EMBL gene 4389392 4390360 . - . ID=.9042;gene=psd;locus_tag=b4160;gene_synonym=ECK4156;gene_synonym=JW4121;db_xref=EcoGene:EG10775 EMBL CDS 4389392 4390360 . - 0 ID=.9043;gene=psd;locus_tag=b4160;gene_synonym=ECK4156;gene_synonym=JW4121;ec_number=4.1.1.65;function=enzyme%3B Macromolecule synthesis%2C modification: Phospholipids;experiment=N-terminus verified by Edman degradation: PMID 3042771;note=phosphatidylserine decarboxylase%3B phospholipid synthesis%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0008654 - phospholipid biosynthetic process;codon_start=1;transl_table=11;product=phosphatidylserine decarboxylase;protein_id=AAC77120.1;db_xref=GI:1790604;db_xref=ASAP:ABE-0013623;db_xref=UniProtKB/Swiss-Prot:P0A8K1;db_xref=EcoGene:EG10775 EMBL gene 4390457 4391509 . - . ID=.9044;gene=rsgA;locus_tag=b4161;gene_synonym=ECK4157;gene_synonym=engC;gene_synonym=JW4122;gene_synonym=yjeQ;db_xref=EcoGene:EG12479 EMBL CDS 4390457 4391509 . - 0 ID=.9045;gene=rsgA;locus_tag=b4161;gene_synonym=ECK4157;gene_synonym=engC;gene_synonym=JW4122;gene_synonym=yjeQ;ec_number=3.6.1.-;codon_start=1;transl_table=11;product=ribosome small subunit-dependent GTPase A;protein_id=AAC77121.2;db_xref=GI:87082381;db_xref=ASAP:ABE-0013626;db_xref=UniProtKB/Swiss-Prot:P39286;db_xref=EcoGene:EG12479 EMBL gene 4391604 4392149 . + . ID=.9046;gene=orn;locus_tag=b4162;gene_synonym=ECK4158;gene_synonym=JW5740;gene_synonym=yjeR;db_xref=EcoGene:EG12480 EMBL CDS 4391604 4392149 . + 0 ID=.9047;gene=orn;locus_tag=b4162;gene_synonym=ECK4158;gene_synonym=JW5740;gene_synonym=yjeR;ec_number=3.1.-.-;note=GO_process: GO:0006401 - RNA catabolic process;codon_start=1;transl_table=11;product=oligoribonuclease;protein_id=AAC77122.2;db_xref=GI:87082382;db_xref=ASAP:ABE-0013631;db_xref=UniProtKB/Swiss-Prot:P0A784;db_xref=EcoGene:EG12480 EMBL gene 4392360 4392435 . + . ID=.9048;gene=glyV;locus_tag=b4163;gene_synonym=ECK4159;gene_synonym=glyValpha;gene_synonym=ins;gene_synonym=JWR0112;gene_synonym=suA58;gene_synonym=suA78;db_xref=EcoGene:EG30038 EMBL tRNA 4392360 4392435 . + . ID=.9049;gene=glyV;locus_tag=b4163;gene_synonym=ECK4159;gene_synonym=glyValpha;gene_synonym=ins;gene_synonym=JWR0112;gene_synonym=suA58;gene_synonym=suA78;product=tRNA-Gly;note=anticodon: GCC;db_xref=ASAP:ABE-0013635;db_xref=EcoGene:EG30038 EMBL gene 4392472 4392547 . + . ID=.9050;gene=glyX;locus_tag=b4164;gene_synonym=ECK4160;gene_synonym=glyVbeta;gene_synonym=JWR0113;gene_synonym=mutA;db_xref=EcoGene:EG30040 EMBL tRNA 4392472 4392547 . + . ID=.9051;gene=glyX;locus_tag=b4164;gene_synonym=ECK4160;gene_synonym=glyVbeta;gene_synonym=JWR0113;gene_synonym=mutA;product=tRNA-Gly;note=anticodon: GCC;db_xref=ASAP:ABE-0013637;db_xref=EcoGene:EG30040 EMBL gene 4392583 4392658 . + . ID=.9052;gene=glyY;locus_tag=b4165;gene_synonym=ECK4161;gene_synonym=glyVgamma;gene_synonym=JWR0114;db_xref=EcoGene:EG30041 EMBL tRNA 4392583 4392658 . + . ID=.9053;gene=glyY;locus_tag=b4165;gene_synonym=ECK4161;gene_synonym=glyVgamma;gene_synonym=JWR0114;product=tRNA-Gly;note=anticodon: GCC;db_xref=ASAP:ABE-0013639;db_xref=EcoGene:EG30041 EMBL gene 4392892 4392945 . + . ID=.9054;gene=yjeV;locus_tag=b4670;gene_synonym=ECK4485;db_xref=EcoGene:EG14475 EMBL CDS 4392892 4392945 . + 0 ID=.9055;gene=yjeV;locus_tag=b4670;gene_synonym=ECK4485;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=ACO60013.1;db_xref=GI:226510989;db_xref=UniProtKB/Swiss-Prot:C1P621;db_xref=EcoGene:EG14475 EMBL gene 4392928 4394067 . - . ID=.9056;gene=queG;locus_tag=b4166;gene_synonym=ECK4162;gene_synonym=JW4124;gene_synonym=yjeS;db_xref=EcoGene:EG12481 EMBL CDS 4392928 4394067 . - 0 ID=.9057;gene=queG;locus_tag=b4166;gene_synonym=ECK4162;gene_synonym=JW4124;gene_synonym=yjeS;function=enzyme%3B cofactor biosynthesis;codon_start=1;transl_table=11;product=epoxyqueuosine reductase%2C cobalamine-stimulated%3B queosine biosynthesis;protein_id=AAC77123.1;db_xref=GI:1790608;db_xref=ASAP:ABE-0013641;db_xref=UniProtKB/Swiss-Prot:P39288;db_xref=EcoGene:EG12481 EMBL gene 4394066 4395613 . + . ID=.9058;gene=nnr;locus_tag=b4167;gene_synonym=ECK4163;gene_synonym=JW4125;gene_synonym=yjeF;db_xref=EcoGene:EG11758 EMBL CDS 4394066 4395613 . + 0 ID=.9059;gene=nnr;locus_tag=b4167;gene_synonym=ECK4163;gene_synonym=JW4125;gene_synonym=yjeF;function=enzyme%3B Not classified;codon_start=1;transl_table=11;product=bifunctional NAD(P)H-hydrate repair enzyme%3B C-terminal domain ADP-dependent (S)-NAD(P)H-hydrate dehydratase and N-terminal domain NAD(P)H-hydrate epimerase;protein_id=AAC77124.1;db_xref=GI:1790609;db_xref=ASAP:ABE-0013644;db_xref=UniProtKB/Swiss-Prot:P31806;db_xref=EcoGene:EG11758 EMBL gene 4395585 4396046 . + . ID=.9060;gene=tsaE;locus_tag=b4168;gene_synonym=ECK4164;gene_synonym=JW4126;gene_synonym=yjeE;db_xref=EcoGene:EG11757 EMBL CDS 4395585 4396046 . + 0 ID=.9061;gene=tsaE;locus_tag=b4168;gene_synonym=ECK4164;gene_synonym=JW4126;gene_synonym=yjeE;function=enzyme%3B tRNA modification;codon_start=1;transl_table=11;product=tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein%3B ADP binding protein;protein_id=AAC77125.1;db_xref=GI:1790610;db_xref=ASAP:ABE-0013649;db_xref=UniProtKB/Swiss-Prot:P0AF67;db_xref=EcoGene:EG11757 EMBL gene 4396065 4397402 . + . ID=.9062;gene=amiB;locus_tag=b4169;gene_synonym=ECK4165;gene_synonym=JW4127;gene_synonym=yjeD;db_xref=EcoGene:EG11363 EMBL CDS 4396065 4397402 . + 0 ID=.9063;gene=amiB;locus_tag=b4169;gene_synonym=ECK4165;gene_synonym=JW4127;gene_synonym=yjeD;ec_number=3.5.1.28;function=enzyme%3B Murein sacculus%2C peptidoglycan;note=N-acetylmuramoyl-l-alanine amidase II%3B a murein hydrolase%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_process: GO:0009252 - peptidoglycan biosynthetic process;codon_start=1;transl_table=11;product=N-acetylmuramoyl-l-alanine amidase II;protein_id=AAC77126.1;db_xref=GI:1790611;db_xref=ASAP:ABE-0013653;db_xref=UniProtKB/Swiss-Prot:P26365;db_xref=EcoGene:EG11363 EMBL gene 4397412 4399259 . + . ID=.9064;gene=mutL;locus_tag=b4170;gene_synonym=ECK4166;gene_synonym=JW4128;db_xref=EcoGene:EG11281 EMBL CDS 4397412 4399259 . + 0 ID=.9065;gene=mutL;locus_tag=b4170;gene_synonym=ECK4166;gene_synonym=JW4128;function=enzyme%3B DNA - replication%2C repair%2C restriction/modification;note=enzyme in methyl-directed mismatch repair%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006281 - DNA repair;codon_start=1;transl_table=11;product=methyl-directed mismatch repair protein;protein_id=AAC77127.1;db_xref=GI:1790612;db_xref=ASAP:ABE-0013655;db_xref=UniProtKB/Swiss-Prot:P23367;db_xref=EcoGene:EG11281 EMBL gene 4399252 4400202 . + . ID=.9066;gene=miaA;locus_tag=b4171;gene_synonym=ECK4167;gene_synonym=JW4129;gene_synonym=trpX;db_xref=EcoGene:EG10595 EMBL CDS 4399252 4400202 . + 0 ID=.9067;gene=miaA;locus_tag=b4171;gene_synonym=ECK4167;gene_synonym=JW4129;gene_synonym=trpX;ec_number=2.5.1.75;function=enzyme%3B Aminoacyl tRNA synthetases%2C tRNA modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009451 - RNA modification;codon_start=1;transl_table=11;product=delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase;protein_id=AAC77128.1;db_xref=GI:1790613;db_xref=ASAP:ABE-0013657;db_xref=UniProtKB/Swiss-Prot:P16384;db_xref=EcoGene:EG10595 EMBL gene 4400288 4400596 . + . ID=.9068;gene=hfq;locus_tag=b4172;gene_synonym=ECK4168;gene_synonym=JW4130;db_xref=EcoGene:EG10438 EMBL CDS 4400288 4400596 . + 0 ID=.9069;gene=hfq;locus_tag=b4172;gene_synonym=ECK4168;gene_synonym=JW4130;function=factor%3B Phage-related functions and prophages;note=host factor I for bacteriophage Q beta replication%2C a growth-related protein%3B GO_process: GO:0009386 - translational attenuation;codon_start=1;transl_table=11;product=global sRNA chaperone%3B HF-I%2C host factor for RNA phage Q beta replication;protein_id=AAC77129.1;db_xref=GI:1790614;db_xref=ASAP:ABE-0013659;db_xref=UniProtKB/Swiss-Prot:P0A6X3;db_xref=EcoGene:EG10438 EMBL gene 4400672 4401952 . + . ID=.9070;gene=hflX;locus_tag=b4173;gene_synonym=ECK4169;gene_synonym=hflA;gene_synonym=hslX;gene_synonym=JW4131;db_xref=EcoGene:EG10437 EMBL CDS 4400672 4401952 . + 0 ID=.9071;gene=hflX;locus_tag=b4173;gene_synonym=ECK4169;gene_synonym=hflA;gene_synonym=hslX;gene_synonym=JW4131;function=enzyme%3B Degradation of proteins%2C peptides%2C glyco;note=GTP - binding subunit of protease specific for phage lambda cII repressor;codon_start=1;transl_table=11;product=GTPase%2C stimulated by 50S subunit binding%3B Mn(2+) homeostasis regulator;protein_id=AAC77130.1;db_xref=GI:1790615;db_xref=ASAP:ABE-0013661;db_xref=UniProtKB/Swiss-Prot:P25519;db_xref=EcoGene:EG10437 EMBL gene 4402038 4403297 . + . ID=.9072;gene=hflK;locus_tag=b4174;gene_synonym=ECK4170;gene_synonym=hflA;gene_synonym=hslY;gene_synonym=JW4132;db_xref=EcoGene:EG10436 EMBL CDS 4402038 4403297 . + 0 ID=.9073;gene=hflK;locus_tag=b4174;gene_synonym=ECK4170;gene_synonym=hflA;gene_synonym=hslY;gene_synonym=JW4132;function=enzyme%3B Degradation of proteins%2C peptides%2C glyco;note=protease specific for phage lambda cII repressor;codon_start=1;transl_table=11;product=modulator for HflB protease specific for phage lambda cII repressor;protein_id=AAC77131.1;db_xref=GI:1790616;db_xref=ASAP:ABE-0013663;db_xref=UniProtKB/Swiss-Prot:P0ABC7;db_xref=EcoGene:EG10436 EMBL gene 4403300 4404304 . + . ID=.9074;gene=hflC;locus_tag=b4175;gene_synonym=ECK4171;gene_synonym=hflA;gene_synonym=JW4133;db_xref=EcoGene:EG10435 EMBL CDS 4403300 4404304 . + 0 ID=.9075;gene=hflC;locus_tag=b4175;gene_synonym=ECK4171;gene_synonym=hflA;gene_synonym=JW4133;function=enzyme%3B Degradation of proteins%2C peptides%2C glyco;note=protease specific for phage lambda cII repressor;codon_start=1;transl_table=11;product=HflB protease modulator specific for phage lambda cII repressor;protein_id=AAC77132.1;db_xref=GI:1790617;db_xref=ASAP:ABE-0013665;db_xref=UniProtKB/Swiss-Prot:P0ABC3;db_xref=EcoGene:EG10435 EMBL gene 4404386 4404583 . + . ID=.9076;gene=yjeT;locus_tag=b4176;gene_synonym=ECK4172;gene_synonym=JW4134;db_xref=EcoGene:EG12482 EMBL CDS 4404386 4404583 . + 0 ID=.9077;gene=yjeT;locus_tag=b4176;gene_synonym=ECK4172;gene_synonym=JW4134;codon_start=1;transl_table=11;product=DUF2065 family protein;protein_id=AAC77133.1;db_xref=GI:1790619;db_xref=ASAP:ABE-0013669;db_xref=UniProtKB/Swiss-Prot:P0AF73;db_xref=EcoGene:EG12482 EMBL gene 4404687 4405985 . + . ID=.9078;gene=purA;locus_tag=b4177;gene_synonym=ECK4173;gene_synonym=JW4135;db_xref=EcoGene:EG10790 EMBL CDS 4404687 4405985 . + 0 ID=.9079;gene=purA;locus_tag=b4177;gene_synonym=ECK4173;gene_synonym=JW4135;ec_number=6.3.4.4;function=enzyme%3B Purine ribonucleotide biosynthesis;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006164 - purine nucleotide biosynthetic process%3B GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion;codon_start=1;transl_table=11;product=adenylosuccinate synthetase;protein_id=AAC77134.1;db_xref=GI:1790620;db_xref=ASAP:ABE-0013672;db_xref=UniProtKB/Swiss-Prot:P0A7D4;db_xref=EcoGene:EG10790 EMBL gene 4406190 4406615 . + . ID=.9080;gene=nsrR;locus_tag=b4178;gene_synonym=ECK4174;gene_synonym=JW4136;gene_synonym=yjeB;db_xref=EcoGene:EG11212 EMBL CDS 4406190 4406615 . + 0 ID=.9081;gene=nsrR;locus_tag=b4178;gene_synonym=ECK4174;gene_synonym=JW4136;gene_synonym=yjeB;codon_start=1;transl_table=11;product=nitric oxide-sensitive repressor for NO regulon;protein_id=AAC77135.1;db_xref=GI:1790621;db_xref=ASAP:ABE-0013676;db_xref=UniProtKB/Swiss-Prot:P0AF63;db_xref=EcoGene:EG11212 EMBL gene 4406654 4409095 . + . ID=.9082;gene=rnr;locus_tag=b4179;gene_synonym=ECK4175;gene_synonym=JW5741;gene_synonym=vacB;gene_synonym=yjeC;db_xref=EcoGene:EG11259 EMBL CDS 4406654 4409095 . + 0 ID=.9083;gene=rnr;locus_tag=b4179;gene_synonym=ECK4175;gene_synonym=JW5741;gene_synonym=vacB;gene_synonym=yjeC;ec_number=3.1.-.-;function=putative enzyme%3B Not classified;note=GO_process: GO:0006401 - RNA catabolic process;codon_start=1;transl_table=11;product=exoribonuclease R%2C RNase R;protein_id=AAC77136.2;db_xref=GI:87082383;db_xref=ASAP:ABE-0013678;db_xref=UniProtKB/Swiss-Prot:P21499;db_xref=EcoGene:EG11259 EMBL repeat_region 4409153 4409250 . + . ID=.9084;note=RIP331 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 4409275 4410006 . + . ID=.9085;gene=rlmB;locus_tag=b4180;gene_synonym=ECK4176;gene_synonym=JW4138;gene_synonym=yjfH;db_xref=EcoGene:EG12483 EMBL CDS 4409275 4410006 . + 0 ID=.9086;gene=rlmB;locus_tag=b4180;gene_synonym=ECK4176;gene_synonym=JW4138;gene_synonym=yjfH;ec_number=2.1.1.-;function=enzyme%3B rRNA modification;note=GO_process: GO:0009451 - RNA modification;codon_start=1;transl_table=11;product=23S rRNA mG2251 2'-O-ribose methyltransferase%2C SAM-dependent;protein_id=AAC77137.1;db_xref=GI:1790623;db_xref=ASAP:ABE-0013684;db_xref=UniProtKB/Swiss-Prot:P63177;db_xref=EcoGene:EG12483 EMBL gene 4410133 4410534 . + . ID=.9087;gene=yjfI;locus_tag=b4181;gene_synonym=ECK4177;gene_synonym=JW4139;db_xref=EcoGene:EG12484 EMBL CDS 4410133 4410534 . + 0 ID=.9088;gene=yjfI;locus_tag=b4181;gene_synonym=ECK4177;gene_synonym=JW4139;codon_start=1;transl_table=11;product=DUF2170 family protein;protein_id=AAC77138.1;db_xref=GI:1790624;db_xref=ASAP:ABE-0013687;db_xref=UniProtKB/Swiss-Prot:P0AF76;db_xref=EcoGene:EG12484 EMBL gene 4410553 4411251 . + . ID=.9089;gene=yjfJ;locus_tag=b4182;gene_synonym=ECK4178;gene_synonym=JW4140;db_xref=EcoGene:EG12485 EMBL CDS 4410553 4411251 . + 0 ID=.9090;gene=yjfJ;locus_tag=b4182;gene_synonym=ECK4178;gene_synonym=JW4140;function=phenotype%3B Not classified;note=putative alpha helical protein;codon_start=1;transl_table=11;product=PspA/IM30 family protein;protein_id=AAC77139.1;db_xref=GI:1790625;db_xref=ASAP:ABE-0013689;db_xref=UniProtKB/Swiss-Prot:P0AF78;db_xref=EcoGene:EG12485 EMBL gene 4411302 4411961 . + . ID=.9091;gene=yjfK;locus_tag=b4183;gene_synonym=ECK4179;gene_synonym=JW4141;db_xref=EcoGene:EG12486 EMBL CDS 4411302 4411961 . + 0 ID=.9092;gene=yjfK;locus_tag=b4183;gene_synonym=ECK4179;gene_synonym=JW4141;codon_start=1;transl_table=11;product=DUF2491 family protein;protein_id=AAC77140.1;db_xref=GI:1790626;db_xref=ASAP:ABE-0013692;db_xref=UniProtKB/Swiss-Prot:P39293;db_xref=EcoGene:EG12486 EMBL gene 4411979 4412377 . + . ID=.9093;gene=yjfL;locus_tag=b4184;gene_synonym=ECK4180;gene_synonym=JW4142;db_xref=EcoGene:EG12487 EMBL CDS 4411979 4412377 . + 0 ID=.9094;gene=yjfL;locus_tag=b4184;gene_synonym=ECK4180;gene_synonym=JW4142;note=GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=UPF0719 family inner membrane protein;protein_id=AAC77141.1;db_xref=GI:1790627;db_xref=ASAP:ABE-0013694;db_xref=UniProtKB/Swiss-Prot:P0AF80;db_xref=EcoGene:EG12487 EMBL gene 4412387 4413025 . + . ID=.9095;gene=yjfM;locus_tag=b4185;gene_synonym=ECK4181;gene_synonym=JW4143;db_xref=EcoGene:EG12488 EMBL CDS 4412387 4413025 . + 0 ID=.9096;gene=yjfM;locus_tag=b4185;gene_synonym=ECK4181;gene_synonym=JW4143;codon_start=1;transl_table=11;product=DUF1190 family protein;protein_id=AAC77142.1;db_xref=GI:1790628;db_xref=ASAP:ABE-0013696;db_xref=UniProtKB/Swiss-Prot:P39295;db_xref=EcoGene:EG12488 EMBL gene 4413028 4414191 . + . ID=.9097;gene=yjfC;locus_tag=b4186;gene_synonym=ECK4182;gene_synonym=JW4144;db_xref=EcoGene:EG11812 EMBL CDS 4413028 4414191 . + 0 ID=.9098;gene=yjfC;locus_tag=b4186;gene_synonym=ECK4182;gene_synonym=JW4144;function=putative enzyme%3B Not classified;note=putative synthetase/amidase;codon_start=1;transl_table=11;product=ATP-Grasp family ATPase;protein_id=AAC77143.1;db_xref=GI:1790629;db_xref=ASAP:ABE-0013698;db_xref=UniProtKB/Swiss-Prot:P33222;db_xref=EcoGene:EG11812 EMBL gene 4414275 4415900 . + . ID=.9099;gene=aidB;locus_tag=b4187;gene_synonym=ECK4183;gene_synonym=JW5867;db_xref=EcoGene:EG11811 EMBL CDS 4414275 4415900 . + 0 ID=.9100;gene=aidB;locus_tag=b4187;gene_synonym=ECK4183;gene_synonym=JW5867;function=enzyme%3B DNA repair;note=putative acyl coenzyme A dehydrogenase%3B GO_process: GO:0006950 - response to stress;codon_start=1;transl_table=11;product=DNA alkylation damage repair protein%3B flavin-containing DNA binding protein%2C weak isovaleryl CoA dehydrogenase;protein_id=AAC77144.2;db_xref=GI:87082384;db_xref=ASAP:ABE-0013701;db_xref=UniProtKB/Swiss-Prot:P33224;db_xref=EcoGene:EG11811 EMBL repeat_region 4415958 4415991 . + . ID=.9101;note=REP332 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 4416017 4416292 . - . ID=.9102;gene=yjfN;locus_tag=b4188;gene_synonym=ECK4184;gene_synonym=JW5742;db_xref=EcoGene:EG12521 EMBL CDS 4416017 4416292 . - 0 ID=.9103;gene=yjfN;locus_tag=b4188;gene_synonym=ECK4184;gene_synonym=JW5742;codon_start=1;transl_table=11;product=DUF1471 family periplasmic protein;protein_id=AAC77145.2;db_xref=GI:87082385;db_xref=ASAP:ABE-0013704;db_xref=UniProtKB/Swiss-Prot:P0AF82;db_xref=EcoGene:EG12521 EMBL gene 4416441 4416770 . - . ID=.9104;gene=bsmA;locus_tag=b4189;gene_synonym=ECK4185;gene_synonym=JW5743;gene_synonym=yjfO;db_xref=EcoGene:EG12489 EMBL CDS 4416441 4416770 . - 0 ID=.9105;gene=bsmA;locus_tag=b4189;gene_synonym=ECK4185;gene_synonym=JW5743;gene_synonym=yjfO;codon_start=1;transl_table=11;product=bioflm peroxide resistance protein;protein_id=AAC77146.2;db_xref=GI:87082386;db_xref=ASAP:ABE-0013706;db_xref=UniProtKB/Swiss-Prot:P39297;db_xref=EcoGene:EG12489 EMBL gene 4416952 4417701 . + . ID=.9106;gene=yjfP;locus_tag=b4190;gene_synonym=ECK4186;gene_synonym=JW4148;db_xref=EcoGene:EG12490 EMBL CDS 4416952 4417701 . + 0 ID=.9107;gene=yjfP;locus_tag=b4190;gene_synonym=ECK4186;gene_synonym=JW4148;codon_start=1;transl_table=11;product=acyl CoA esterase;protein_id=AAC77147.1;db_xref=GI:1790634;db_xref=ASAP:ABE-0013711;db_xref=UniProtKB/Swiss-Prot:P39298;db_xref=EcoGene:EG12490 EMBL gene 4417698 4418453 . - . ID=.9108;gene=ulaR;locus_tag=b4191;gene_synonym=ECK4187;gene_synonym=JW4149;gene_synonym=yjfQ;db_xref=EcoGene:EG12491 EMBL CDS 4417698 4418453 . - 0 ID=.9109;gene=ulaR;locus_tag=b4191;gene_synonym=ECK4187;gene_synonym=JW4149;gene_synonym=yjfQ;function=putative regulator%3B Not classified;note=putative DEOR-type transcriptional regulator%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=transcriptional repressor for the L-ascorbate utilization divergent operon;protein_id=AAC77148.1;db_xref=GI:1790635;db_xref=ASAP:ABE-0013713;db_xref=UniProtKB/Swiss-Prot:P0A9W0;db_xref=EcoGene:EG12491 EMBL gene 4418561 4419625 . - . ID=.9110;gene=ulaG;locus_tag=b4192;gene_synonym=ECK4188;gene_synonym=JW5868;gene_synonym=yjfR;db_xref=EcoGene:EG12492 EMBL CDS 4418561 4419625 . - 0 ID=.9111;gene=ulaG;locus_tag=b4192;gene_synonym=ECK4188;gene_synonym=JW5868;gene_synonym=yjfR;codon_start=1;transl_table=11;product=L-ascorbate 6-phosphate lactonase;protein_id=AAC77149.2;db_xref=GI:87082387;db_xref=ASAP:ABE-0013717;db_xref=UniProtKB/Swiss-Prot:P39300;db_xref=EcoGene:EG12492 EMBL gene 4419980 4421377 . + . ID=.9112;gene=ulaA;locus_tag=b4193;gene_synonym=ECK4189;gene_synonym=JW5744;gene_synonym=sgaT;gene_synonym=yjfS;db_xref=EcoGene:EG12493 EMBL CDS 4419980 4421377 . + 0 ID=.9113;gene=ulaA;locus_tag=b4193;gene_synonym=ECK4189;gene_synonym=JW5744;gene_synonym=sgaT;gene_synonym=yjfS;note=GO_process: GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system;codon_start=1;transl_table=11;product=L-ascorbate-specific enzyme IIC permease component of PTS;protein_id=AAC77150.2;db_xref=GI:87082388;db_xref=ASAP:ABE-0013723;db_xref=UniProtKB/Swiss-Prot:P39301;db_xref=EcoGene:EG12493 EMBL gene 4421393 4421698 . + . ID=.9114;gene=ulaB;locus_tag=b4194;gene_synonym=ECK4190;gene_synonym=JW4152;gene_synonym=sgaB;gene_synonym=yjfT;db_xref=EcoGene:EG12494 EMBL CDS 4421393 4421698 . + 0 ID=.9115;gene=ulaB;locus_tag=b4194;gene_synonym=ECK4190;gene_synonym=JW4152;gene_synonym=sgaB;gene_synonym=yjfT;ec_number=2.7.1.69;note=GO_process: GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system;codon_start=1;transl_table=11;product=L-ascorbate-specific enzyme IIB component of PTS;protein_id=AAC77151.1;db_xref=GI:1790638;db_xref=ASAP:ABE-0013725;db_xref=UniProtKB/Swiss-Prot:P69822;db_xref=EcoGene:EG12494 EMBL gene 4421708 4422172 . + . ID=.9116;gene=ulaC;locus_tag=b4195;gene_synonym=ECK4191;gene_synonym=JW4153;gene_synonym=ptxA;gene_synonym=sgaA;gene_synonym=yjfU;db_xref=EcoGene:EG12495 EMBL CDS 4421708 4422172 . + 0 ID=.9117;gene=ulaC;locus_tag=b4195;gene_synonym=ECK4191;gene_synonym=JW4153;gene_synonym=ptxA;gene_synonym=sgaA;gene_synonym=yjfU;ec_number=2.7.1.69;function=putative transport%3B Not classified;note=putative PTS system enzyme II A component;codon_start=1;transl_table=11;product=L-ascorbate-specific enzyme IIA component of PTS;protein_id=AAC77152.1;db_xref=GI:2367359;db_xref=ASAP:ABE-0013727;db_xref=UniProtKB/Swiss-Prot:P69820;db_xref=EcoGene:EG12495 EMBL gene 4422186 4422836 . + . ID=.9118;gene=ulaD;locus_tag=b4196;gene_synonym=ECK4192;gene_synonym=JW4154;gene_synonym=sgaH;gene_synonym=yjfV;db_xref=EcoGene:EG12496 EMBL CDS 4422186 4422836 . + 0 ID=.9119;gene=ulaD;locus_tag=b4196;gene_synonym=ECK4192;gene_synonym=JW4154;gene_synonym=sgaH;gene_synonym=yjfV;ec_number=4.1.2.-;function=putative enzyme%3B Central intermediary metabolism: Pool%2C multipurpose conversions;experiment=N-terminus verified by Edman degradation: PMID 9740056;note=probable hexulose-6-phosphate synthase;codon_start=1;transl_table=11;product=3-keto-L-gulonate 6-phosphate decarboxylase;protein_id=AAC77153.1;db_xref=GI:1790640;db_xref=ASAP:ABE-0013729;db_xref=UniProtKB/Swiss-Prot:P39304;db_xref=EcoGene:EG12496 EMBL gene 4422846 4423700 . + . ID=.9120;gene=ulaE;locus_tag=b4197;gene_synonym=ECK4193;gene_synonym=JW4155;gene_synonym=sgaU;gene_synonym=yjfW;db_xref=EcoGene:EG12497 EMBL CDS 4422846 4423700 . + 0 ID=.9121;gene=ulaE;locus_tag=b4197;gene_synonym=ECK4193;gene_synonym=JW4155;gene_synonym=sgaU;gene_synonym=yjfW;ec_number=5.1.3.22;function=putative enzyme%3B Central intermediary metabolism: Pool%2C multipurpose conversions;note=putative hexulose-6-phosphate isomerase;codon_start=1;transl_table=11;product=L-xylulose 5-phosphate 3-epimerase;protein_id=AAC77154.1;db_xref=GI:1790641;db_xref=ASAP:ABE-0013732;db_xref=UniProtKB/Swiss-Prot:P39305;db_xref=EcoGene:EG12497 EMBL gene 4423700 4424386 . + . ID=.9122;gene=ulaF;locus_tag=b4198;gene_synonym=ECK4194;gene_synonym=JW4156;gene_synonym=sgaE;gene_synonym=yjfX;db_xref=EcoGene:EG12498 EMBL CDS 4423700 4424386 . + 0 ID=.9123;gene=ulaF;locus_tag=b4198;gene_synonym=ECK4194;gene_synonym=JW4156;gene_synonym=sgaE;gene_synonym=yjfX;ec_number=5.1.3.4;function=putative enzyme%3B Not classified;note=putative epimerase/aldolase;codon_start=1;transl_table=11;product=L-ribulose 5-phosphate 4-epimerase;protein_id=AAC77155.1;db_xref=GI:1790642;db_xref=ASAP:ABE-0013734;db_xref=UniProtKB/Swiss-Prot:P39306;db_xref=EcoGene:EG12498 EMBL gene 4424516 4424791 . - . ID=.9124;gene=yjfY;locus_tag=b4199;gene_synonym=ECK4195;gene_synonym=JW4157;db_xref=EcoGene:EG12499 EMBL CDS 4424516 4424791 . - 0 ID=.9125;gene=yjfY;locus_tag=b4199;gene_synonym=ECK4195;gene_synonym=JW4157;codon_start=1;transl_table=11;product=YhcN family protein%2C periplasmic;protein_id=AAC77156.1;db_xref=GI:1790643;db_xref=ASAP:ABE-0013736;db_xref=UniProtKB/Swiss-Prot:P0AF86;db_xref=EcoGene:EG12499 EMBL gene 4425118 4425513 . + . ID=.9126;gene=rpsF;locus_tag=b4200;gene_synonym=ECK4196;gene_synonym=JW4158;gene_synonym=sdgH;db_xref=EcoGene:EG10905 EMBL CDS 4425118 4425513 . + 0 ID=.9127;gene=rpsF;locus_tag=b4200;gene_synonym=ECK4196;gene_synonym=JW4158;gene_synonym=sdgH;function=structural component%3B Ribosomal proteins - synthesis%2C modification;experiment=N-terminus verified by Edman degradation: PMID 328274%2C8740179%2C9298646%2C9600841%2C9740056%2C9868784;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0003735 - structural constituent of ribosome%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=30S ribosomal subunit protein S6;protein_id=AAC77157.5;db_xref=GI:296040586;db_xref=ASAP:ABE-0013740;db_xref=UniProtKB/Swiss-Prot:P02358;db_xref=EcoGene:EG10905 EMBL gene 4425520 4425834 . + . ID=.9128;gene=priB;locus_tag=b4201;gene_synonym=ECK4197;gene_synonym=JW4159;db_xref=EcoGene:EG10764 EMBL CDS 4425520 4425834 . + 0 ID=.9129;gene=priB;locus_tag=b4201;gene_synonym=ECK4197;gene_synonym=JW4159;function=factor%3B DNA - replication%2C repair%2C restriction/modification;note=primosomal replication protein N%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006261 - DNA-dependent DNA replication;codon_start=1;transl_table=11;product=primosomal protein N;protein_id=AAC77158.1;db_xref=GI:1790645;db_xref=ASAP:ABE-0013742;db_xref=UniProtKB/Swiss-Prot:P07013;db_xref=EcoGene:EG10764 EMBL gene 4425839 4426066 . + . ID=.9130;gene=rpsR;locus_tag=b4202;gene_synonym=ECK4198;gene_synonym=JW4160;db_xref=EcoGene:EG10917 EMBL CDS 4425839 4426066 . + 0 ID=.9131;gene=rpsR;locus_tag=b4202;gene_synonym=ECK4198;gene_synonym=JW4160;function=structural component%3B Ribosomal proteins - synthesis%2C modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0003735 - structural constituent of ribosome%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=30S ribosomal subunit protein S18;protein_id=AAC77159.1;db_xref=GI:1790646;db_xref=ASAP:ABE-0013744;db_xref=UniProtKB/Swiss-Prot:P0A7T7;db_xref=EcoGene:EG10917 EMBL gene 4426108 4426557 . + . ID=.9132;gene=rplI;locus_tag=b4203;gene_synonym=ECK4199;gene_synonym=JW4161;db_xref=EcoGene:EG10870 EMBL CDS 4426108 4426557 . + 0 ID=.9133;gene=rplI;locus_tag=b4203;gene_synonym=ECK4199;gene_synonym=JW4161;function=structural component%3B Ribosomal proteins - synthesis%2C modification;experiment=N-terminus verified by Edman degradation: PMID 8740179%2C9298646%2C9600841%2C9740056;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0003735 - structural constituent of ribosome%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=50S ribosomal subunit protein L9;protein_id=AAC77160.1;db_xref=GI:1790647;db_xref=ASAP:ABE-0013746;db_xref=UniProtKB/Swiss-Prot:P0A7R1;db_xref=EcoGene:EG10870 EMBL gene 4426628 4427422 . - . ID=.9134;gene=yjfZ;locus_tag=b4204;gene_synonym=ECK4200;gene_synonym=JW4162;db_xref=EcoGene:EG12500 EMBL CDS 4426628 4427422 . - 0 ID=.9135;gene=yjfZ;locus_tag=b4204;gene_synonym=ECK4200;gene_synonym=JW4162;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC77161.1;db_xref=GI:1790648;db_xref=ASAP:ABE-0013748;db_xref=UniProtKB/Swiss-Prot:P39308;db_xref=EcoGene:EG12500 EMBL gene 4427694 4428095 . + . ID=.9136;gene=ytfA;locus_tag=b4205;gene_synonym=ECK4201;gene_synonym=JW4163;pseudo=true;db_xref=EcoGene:EG12501 EMBL CDS 4427694 4428095 . + 0 ID=.9137;gene=ytfA;locus_tag=b4205;gene_synonym=ECK4201;gene_synonym=JW4163;note=pseudogene%2C related to transcriptional regulators;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0013754;db_xref=UniProtKB/Swiss-Prot:P39309;db_xref=EcoGene:EG12501 EMBL gene 4428079 4428717 . - . ID=.9138;gene=ytfB;locus_tag=b4206;gene_synonym=ECK4202;gene_synonym=JW5745;db_xref=EcoGene:EG12502 EMBL CDS 4428079 4428717 . - 0 ID=.9139;gene=ytfB;locus_tag=b4206;gene_synonym=ECK4202;gene_synonym=JW5745;codon_start=1;transl_table=11;product=OapA family protein;protein_id=AAC77163.2;db_xref=GI:87082389;db_xref=ASAP:ABE-0013756;db_xref=UniProtKB/Swiss-Prot:P39310;db_xref=EcoGene:EG12502 EMBL gene 4428935 4429555 . + . ID=.9140;gene=fklB;locus_tag=b4207;gene_synonym=ECK4203;gene_synonym=JW5746;gene_synonym=ytfC;db_xref=EcoGene:EG12503 EMBL CDS 4428935 4429555 . + 0 ID=.9141;gene=fklB;locus_tag=b4207;gene_synonym=ECK4203;gene_synonym=JW5746;gene_synonym=ytfC;ec_number=5.2.1.8;function=enzyme%3B Proteins - translation and modification;note=FKBP-type 22KD peptidyl-prolyl cis-trans isomerase (rotamase)%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase);protein_id=AAC77164.2;db_xref=GI:87082390;db_xref=ASAP:ABE-0013759;db_xref=UniProtKB/Swiss-Prot:P0A9L3;db_xref=EcoGene:EG12503 EMBL gene 4429864 4431276 . + . ID=.9142;gene=cycA;locus_tag=b4208;gene_synonym=dagA;gene_synonym=ECK4204;gene_synonym=JW4166;gene_synonym=ytfD;db_xref=EcoGene:EG12504 EMBL CDS 4429864 4431276 . + 0 ID=.9143;gene=cycA;locus_tag=b4208;gene_synonym=dagA;gene_synonym=ECK4204;gene_synonym=JW4166;gene_synonym=ytfD;function=transport%3B Transport of small molecules: Amino acids%2C amines;note=transport of D-alanine%2C D-serine%2C and glycine%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0009063 - cellular amino acid catabolic process%3B GO_process: GO:0009252 - peptidoglycan biosynthetic process%3B GO_process: GO:0006545 - glycine biosynthetic process%3B GO_process: GO:0006523 - alanine biosynthetic process%3B GO_process: GO:0006164 - purine nucleotide biosynthetic process%3B GO_process: GO:0006750 - glutathione biosynthetic process;codon_start=1;transl_table=11;product=D-alanine/D-serine/glycine transporter;protein_id=AAC77165.1;db_xref=GI:1790653;db_xref=ASAP:ABE-0013764;db_xref=UniProtKB/Swiss-Prot:P0AAE0;db_xref=EcoGene:EG12504 EMBL repeat_region 4431289 4431313 . + . ID=.9144;note=REP333 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 4431321 4431983 . - . ID=.9145;gene=ytfE;locus_tag=b4209;gene_synonym=dnrN;gene_synonym=ECK4205;gene_synonym=JW4167;db_xref=EcoGene:EG12505 EMBL CDS 4431321 4431983 . - 0 ID=.9146;gene=ytfE;locus_tag=b4209;gene_synonym=dnrN;gene_synonym=ECK4205;gene_synonym=JW4167;codon_start=1;transl_table=11;product=iron-sulfur cluster repair protein RIC;protein_id=AAC77166.1;db_xref=GI:1790654;db_xref=ASAP:ABE-0013766;db_xref=UniProtKB/Swiss-Prot:P69506;db_xref=EcoGene:EG12505 EMBL gene 4432091 4433056 . - . ID=.9147;gene=ytfF;locus_tag=b4210;gene_synonym=ECK4206;gene_synonym=JW4168;db_xref=EcoGene:EG12506 EMBL CDS 4432091 4433056 . - 0 ID=.9148;gene=ytfF;locus_tag=b4210;gene_synonym=ECK4206;gene_synonym=JW4168;function=putative membrane%3B Not classified;note=putative transmembrane subunit;codon_start=1;transl_table=11;product=DMT transporter family inner membrane protein;protein_id=AAC77167.2;db_xref=GI:226510990;db_xref=ASAP:ABE-0013769;db_xref=UniProtKB/Swiss-Prot:P39314;db_xref=EcoGene:EG12506 EMBL gene 4433164 4434024 . - . ID=.9149;gene=qorB;locus_tag=b4211;gene_synonym=ECK4207;gene_synonym=JW4169;gene_synonym=qor2;gene_synonym=ytfG;db_xref=EcoGene:EG12507 EMBL CDS 4433164 4434024 . - 0 ID=.9150;gene=qorB;locus_tag=b4211;gene_synonym=ECK4207;gene_synonym=JW4169;gene_synonym=qor2;gene_synonym=ytfG;function=enzyme%3B Energy metabolism%2C carbon: Electron transport;note=putative oxidoreductase;codon_start=1;transl_table=11;product=NAD(P)H:quinone oxidoreductase;protein_id=AAC77168.1;db_xref=GI:1790656;db_xref=ASAP:ABE-0013773;db_xref=UniProtKB/Swiss-Prot:P39315;db_xref=EcoGene:EG12507 EMBL gene 4434113 4434493 . + . ID=.9151;gene=ytfH;locus_tag=b4212;gene_synonym=ECK4208;gene_synonym=JW5747;db_xref=EcoGene:EG12508 EMBL CDS 4434113 4434493 . + 0 ID=.9152;gene=ytfH;locus_tag=b4212;gene_synonym=ECK4208;gene_synonym=JW5747;note=GO_process: GO:0006355 - regulation of transcription%2C DNA-dependent;codon_start=1;transl_table=11;product=DUF24 family HxlR-type putative transcriptional regulator;protein_id=AAC77169.2;db_xref=GI:87082391;db_xref=ASAP:ABE-0013777;db_xref=UniProtKB/Swiss-Prot:P0ACN2;db_xref=EcoGene:EG12508 EMBL repeat_region 4434496 4434606 . + . ID=.9153;note=REP334 (repetitive extragenic palindromic) element%3B contains 3 REP sequences EMBL gene 4434622 4436565 . - . ID=.9154;gene=cpdB;locus_tag=b4213;gene_synonym=ECK4209;gene_synonym=JW4171;db_xref=EcoGene:EG10160 EMBL CDS 4434622 4436565 . - 0 ID=.9155;gene=cpdB;locus_tag=b4213;gene_synonym=ECK4209;gene_synonym=JW4171;ec_number=3.1.4.16;function=enzyme%3B Salvage of nucleosides and nucleotides;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion;codon_start=1;transl_table=11;product=2':3'-cyclic-nucleotide 2'-phosphodiesterase;protein_id=AAC77170.1;db_xref=GI:1790658;db_xref=ASAP:ABE-0013782;db_xref=UniProtKB/Swiss-Prot:P08331;db_xref=EcoGene:EG10160 EMBL gene 4436755 4437495 . + . ID=.9156;gene=cysQ;locus_tag=b4214;gene_synonym=amt;gene_synonym=amtA;gene_synonym=ECK4210;gene_synonym=JW4172;db_xref=EcoGene:EG10043 EMBL CDS 4436755 4437495 . + 0 ID=.9157;gene=cysQ;locus_tag=b4214;gene_synonym=amt;gene_synonym=amtA;gene_synonym=ECK4210;gene_synonym=JW4172;function=enzyme%3B Central intermediary metabolism: Sulfur metabolism;note=affects pool of 3'-phosphoadenosine-5'-phosphosulfate in pathway of sulfite synthesis%3B GO_process: GO:0006790 - sulfur metabolic process;codon_start=1;transl_table=11;product=3'(2')%2C5'-bisphosphate nucleotidase;protein_id=AAC77171.1;db_xref=GI:1790659;db_xref=ASAP:ABE-0013786;db_xref=UniProtKB/Swiss-Prot:P22255;db_xref=EcoGene:EG10043 EMBL gene 4437707 4438645 . + . ID=.9158;gene=ytfI;locus_tag=b4215;gene_synonym=ECK4211;gene_synonym=JW5748;db_xref=EcoGene:EG12509 EMBL CDS 4437707 4438645 . + 0 ID=.9159;gene=ytfI;locus_tag=b4215;gene_synonym=ECK4211;gene_synonym=JW5748;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAT48243.1;db_xref=GI:48995000;db_xref=ASAP:ABE-0013790;db_xref=UniProtKB/Swiss-Prot:P39317;db_xref=EcoGene:EG12509 EMBL gene 4438708 4439262 . - . ID=.9160;gene=ytfJ;locus_tag=b4216;gene_synonym=ecfJ;gene_synonym=ECK4212;gene_synonym=JW4175;db_xref=EcoGene:EG12510 EMBL CDS 4438708 4439262 . - 0 ID=.9161;gene=ytfJ;locus_tag=b4216;gene_synonym=ecfJ;gene_synonym=ECK4212;gene_synonym=JW4175;codon_start=1;transl_table=11;product=putative transcriptional regulator;protein_id=AAC77173.1;db_xref=GI:1790662;db_xref=ASAP:ABE-0013792;db_xref=UniProtKB/Swiss-Prot:P39187;db_xref=EcoGene:EG12510 EMBL gene 4439587 4439793 . + . ID=.9162;gene=ytfK;locus_tag=b4217;gene_synonym=ECK4213;gene_synonym=JW5749;db_xref=EcoGene:EG12511 EMBL CDS 4439587 4439793 . + 0 ID=.9163;gene=ytfK;locus_tag=b4217;gene_synonym=ECK4213;gene_synonym=JW5749;codon_start=1;transl_table=11;product=DUF1107 family protein;protein_id=AAC77174.2;db_xref=GI:87082392;db_xref=ASAP:ABE-0013797;db_xref=UniProtKB/Swiss-Prot:P0ADE2;db_xref=EcoGene:EG12511 EMBL gene 4439872 4441215 . - . ID=.9164;gene=ytfL;locus_tag=b4218;gene_synonym=ECK4214;gene_synonym=JW4177;db_xref=EcoGene:EG12512 EMBL CDS 4439872 4441215 . - 0 ID=.9165;gene=ytfL;locus_tag=b4218;gene_synonym=ECK4214;gene_synonym=JW4177;function=putative transport%3B Not classified;note=putative transport protein;codon_start=1;transl_table=11;product=UPF0053 family inner membrane protein;protein_id=AAC77175.1;db_xref=GI:1790664;db_xref=ASAP:ABE-0013799;db_xref=UniProtKB/Swiss-Prot:P0AE45;db_xref=EcoGene:EG12512 EMBL repeat_region 4441393 4441490 . + . ID=.9166;note=RIP335 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 4441538 4442176 . - . ID=.9167;gene=msrA;locus_tag=b4219;gene_synonym=ECK4215;gene_synonym=JW4178;gene_synonym=pms;gene_synonym=pmsR;db_xref=EcoGene:EG11433 EMBL CDS 4441538 4442176 . - 0 ID=.9168;gene=msrA;locus_tag=b4219;gene_synonym=ECK4215;gene_synonym=JW4178;gene_synonym=pms;gene_synonym=pmsR;ec_number=1.8.4.11;function=enzyme%3B Proteins - translation and modification;note=peptide methionine sulfoxide reductase%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=methionine sulfoxide reductase A;protein_id=AAC77176.1;db_xref=GI:1790665;db_xref=ASAP:ABE-0013804;db_xref=UniProtKB/Swiss-Prot:P0A744;db_xref=EcoGene:EG11433 EMBL gene 4442382 4444115 . + . ID=.9169;gene=tamA;locus_tag=b4220;gene_synonym=ECK4216;gene_synonym=JW4179;gene_synonym=yftM;gene_synonym=ytfM;db_xref=EcoGene:EG12513 EMBL CDS 4442382 4444115 . + 0 ID=.9170;gene=tamA;locus_tag=b4220;gene_synonym=ECK4216;gene_synonym=JW4179;gene_synonym=yftM;gene_synonym=ytfM;function=transport%3B Not classified;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane;codon_start=1;transl_table=11;product=translocation and assembly module for autotransporter export%2C outer membrane subunit;protein_id=AAC77177.1;db_xref=GI:1790666;db_xref=ASAP:ABE-0013809;db_xref=UniProtKB/Swiss-Prot:P0ADE4;db_xref=EcoGene:EG12513 EMBL gene 4444112 4447891 . + . ID=.9171;gene=tamB;locus_tag=b4221;gene_synonym=ECK4217;gene_synonym=JW4180;gene_synonym=ytfN;gene_synonym=ytfO;db_xref=EcoGene:EG12514 EMBL CDS 4444112 4447891 . + 0 ID=.9172;gene=tamB;locus_tag=b4221;gene_synonym=ECK4217;gene_synonym=JW4180;gene_synonym=ytfN;gene_synonym=ytfO;function=transport%3B Not classified;codon_start=1;transl_table=11;product=translocation and assembly module for autotransporter export%2C inner membrane subunit;protein_id=AAC77178.1;db_xref=GI:1790667;db_xref=ASAP:ABE-0013811;db_xref=UniProtKB/Swiss-Prot:P39321;db_xref=EcoGene:EG12514 EMBL gene 4447894 4448235 . + . ID=.9173;gene=ytfP;locus_tag=b4222;gene_synonym=ECK4218;gene_synonym=JW4181;db_xref=EcoGene:EG12516 EMBL CDS 4447894 4448235 . + 0 ID=.9174;gene=ytfP;locus_tag=b4222;gene_synonym=ECK4218;gene_synonym=JW4181;codon_start=1;transl_table=11;product=GGCT-like protein;protein_id=AAC77179.1;db_xref=GI:1790668;db_xref=ASAP:ABE-0013814;db_xref=UniProtKB/Swiss-Prot:P0AE48;db_xref=EcoGene:EG12516 EMBL gene 4448447 4448698 . + . ID=.9175;gene=chpS;locus_tag=b4224;gene_synonym=chpBI;gene_synonym=ECK4220;gene_synonym=JW5750;gene_synonym=yjfB;db_xref=EcoGene:EG11250 EMBL CDS 4448447 4448698 . + 0 ID=.9176;gene=chpS;locus_tag=b4224;gene_synonym=chpBI;gene_synonym=ECK4220;gene_synonym=JW5750;gene_synonym=yjfB;function=phenotype%3B Not classified;note=suppressor of inhibitory function of ChpB%2C PemI-like%2C autoregulated;codon_start=1;transl_table=11;product=antitoxin of the ChpBS toxin-antitoxin system;protein_id=AAC77181.2;db_xref=GI:87082393;db_xref=ASAP:ABE-0013820;db_xref=UniProtKB/Swiss-Prot:P08365;db_xref=EcoGene:EG11250 EMBL gene 4448692 4449042 . + . ID=.9177;gene=chpB;locus_tag=b4225;gene_synonym=chpBK;gene_synonym=ECK4221;gene_synonym=JW4184;gene_synonym=yjfE;db_xref=EcoGene:EG12096 EMBL CDS 4448692 4449042 . + 0 ID=.9178;gene=chpB;locus_tag=b4225;gene_synonym=chpBK;gene_synonym=ECK4221;gene_synonym=JW4184;gene_synonym=yjfE;function=putative factor%3B Not classified;note=probable growth inhibitor%2C PemK-like%2C autoregulated;codon_start=1;transl_table=11;product=toxin of the ChpB-ChpS toxin-antitoxin system;protein_id=AAC77182.1;db_xref=GI:1790672;db_xref=ASAP:ABE-0013822;db_xref=UniProtKB/Swiss-Prot:P33647;db_xref=EcoGene:EG12096 EMBL gene 4449122 4449652 . - . ID=.9179;gene=ppa;locus_tag=b4226;gene_synonym=ECK4222;gene_synonym=JW4185;db_xref=EcoGene:EG10755 EMBL CDS 4449122 4449652 . - 0 ID=.9180;gene=ppa;locus_tag=b4226;gene_synonym=ECK4222;gene_synonym=JW4185;ec_number=3.6.1.1;function=enzyme%3B Central intermediary metabolism: Pool%2C multipurpose conversions;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006793 - phosphorus metabolic process;codon_start=1;transl_table=11;product=inorganic pyrophosphatase;protein_id=AAC77183.1;db_xref=GI:1790673;db_xref=ASAP:ABE-0013824;db_xref=UniProtKB/Swiss-Prot:P0A7A9;db_xref=EcoGene:EG10755 EMBL gene 4449962 4450918 . + . ID=.9181;gene=ytfQ;locus_tag=b4227;gene_synonym=ECK4223;gene_synonym=JW4186;db_xref=EcoGene:EG12517 EMBL CDS 4449962 4450918 . + 0 ID=.9182;gene=ytfQ;locus_tag=b4227;gene_synonym=ECK4223;gene_synonym=JW4186;function=putative regulator%3B Not classified;note=putative LACI-type transcriptional regulator%3B GO_component: GO:0042597 - periplasmic space;codon_start=1;transl_table=11;product=galactofuranose ABC transporter periplasmic binding protein;protein_id=AAC77184.1;db_xref=GI:1790674;db_xref=ASAP:ABE-0013829;db_xref=UniProtKB/Swiss-Prot:P39325;db_xref=EcoGene:EG12517 EMBL repeat_region 4450944 4451028 . + . ID=.9183;note=REP336 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 4451058 4452560 . + . ID=.9184;gene=ytfR;locus_tag=b4485;gene_synonym=ECK4224;gene_synonym=JW5752;gene_synonym=ytfS;db_xref=EcoGene:EG12518 EMBL CDS 4451058 4452560 . + 0 ID=.9185;gene=ytfR;locus_tag=b4485;gene_synonym=ECK4224;gene_synonym=JW5752;gene_synonym=ytfS;function=putative transport%3B Not classified;note=putative sugar transport protein (ABC superfamily%2C atp_bind)%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=putative sugar ABC transporter ATPase;protein_id=AAT48244.1;db_xref=GI:48995001;db_xref=ASAP:ABE-0174118;db_xref=UniProtKB/Swiss-Prot:Q6BEX0;db_xref=EcoGene:EG12518 EMBL gene 4452571 4453596 . + . ID=.9186;gene=ytfT;locus_tag=b4230;gene_synonym=ECK4225;gene_synonym=JW5753;db_xref=EcoGene:EG12520 EMBL CDS 4452571 4453596 . + 0 ID=.9187;gene=ytfT;locus_tag=b4230;gene_synonym=ECK4225;gene_synonym=JW5753;function=putative transport%3B Not classified;note=putative transport system permease protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative sugar ABC transporter permease;protein_id=AAC77187.3;db_xref=GI:145693214;db_xref=ASAP:ABE-0013838;db_xref=UniProtKB/Swiss-Prot:P39328;db_xref=EcoGene:EG12520 EMBL gene 4453583 4454578 . + . ID=.9188;gene=yjfF;locus_tag=b4231;gene_synonym=ECK4226;gene_synonym=JW5754;db_xref=EcoGene:EG12439 EMBL CDS 4453583 4454578 . + 0 ID=.9189;gene=yjfF;locus_tag=b4231;gene_synonym=ECK4226;gene_synonym=JW5754;function=putative transport%3B Not classified;note=putative transport system permease protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative sugar ABC transporter permease;protein_id=AAC77188.2;db_xref=GI:87082395;db_xref=ASAP:ABE-0013840;db_xref=UniProtKB/Swiss-Prot:P37772;db_xref=EcoGene:EG12439 EMBL gene 4454611 4455609 . - . ID=.9190;gene=fbp;locus_tag=b4232;gene_synonym=ECK4227;gene_synonym=fdp;gene_synonym=JW4191;db_xref=EcoGene:EG10283 EMBL CDS 4454611 4455609 . - 0 ID=.9191;gene=fbp;locus_tag=b4232;gene_synonym=ECK4227;gene_synonym=fdp;gene_synonym=JW4191;ec_number=3.1.3.11;function=enzyme%3B Central intermediary metabolism: Gluconeogenesis;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006094 - gluconeogenesis;codon_start=1;transl_table=11;product=fructose-1%2C6-bisphosphatase I;protein_id=AAC77189.1;db_xref=GI:1790679;db_xref=ASAP:ABE-0013842;db_xref=UniProtKB/Swiss-Prot:P0A993;db_xref=EcoGene:EG10283 EMBL gene 4455785 4457158 . + . ID=.9192;gene=mpl;locus_tag=b4233;gene_synonym=ECK4228;gene_synonym=JW4192;gene_synonym=tpl;gene_synonym=yjfG;db_xref=EcoGene:EG12440 EMBL CDS 4455785 4457158 . + 0 ID=.9193;gene=mpl;locus_tag=b4233;gene_synonym=ECK4228;gene_synonym=JW4192;gene_synonym=tpl;gene_synonym=yjfG;ec_number=6.3.2.-;function=putative enzyme%3B Not classified;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_process: GO:0000270 - peptidoglycan metabolic process;codon_start=1;transl_table=11;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase;protein_id=AAC77190.1;db_xref=GI:1790680;db_xref=ASAP:ABE-0013847;db_xref=UniProtKB/Swiss-Prot:P37773;db_xref=EcoGene:EG12440 EMBL repeat_region 4457185 4457268 . + . ID=.9194;note=REP337 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 4457314 4457865 . - . ID=.9195;gene=yjgA;locus_tag=b4234;gene_synonym=ECK4229;gene_synonym=JW4193;db_xref=EcoGene:EG11410 EMBL CDS 4457314 4457865 . - 0 ID=.9196;gene=yjgA;locus_tag=b4234;gene_synonym=ECK4229;gene_synonym=JW4193;function=phenotype%3B Not classified;note=putative alpha helix protein%3B GO_function: GO:0004009 - ATP-binding cassette (ABC) transporter activity;codon_start=1;transl_table=11;product=ribosome-associated UPF0307 family protein;protein_id=AAC77191.1;db_xref=GI:1790681;db_xref=ASAP:ABE-0013850;db_xref=UniProtKB/Swiss-Prot:P0A8X0;db_xref=EcoGene:EG11410 EMBL gene 4457959 4459311 . + . ID=.9197;gene=pmbA;locus_tag=b4235;gene_synonym=ECK4230;gene_synonym=JW4194;gene_synonym=mcb;gene_synonym=tldE;db_xref=EcoGene:EG10741 EMBL CDS 4457959 4459311 . + 0 ID=.9198;gene=pmbA;locus_tag=b4235;gene_synonym=ECK4230;gene_synonym=JW4194;gene_synonym=mcb;gene_synonym=tldE;note=maturation of antibiotic MccB17%2C see tld genes%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=putative antibiotic peptide MccB17 maturation peptidase;protein_id=AAC77192.1;db_xref=GI:1790682;db_xref=ASAP:ABE-0013854;db_xref=UniProtKB/Swiss-Prot:P0AFK0;db_xref=EcoGene:EG10741 EMBL gene 4459490 4459855 . + . ID=.9199;gene=cybC;locus_tag=b4236;gene_synonym=ECK4231;gene_synonym=JW4195;pseudo=true;db_xref=EcoGene:EG50008 EMBL CDS 4459490 4459855 . + 0 ID=.9200;gene=cybC;locus_tag=b4236;gene_synonym=ECK4231;gene_synonym=JW4195;note=pseudogene%2C truncated cytochrome b562%3B cytochrome b(562)%3B GO_function: GO:0009055 - electron carrier activity%3B GO_process: GO:0017004 - cytochrome complex assembly;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0013858;db_xref=UniProtKB/Swiss-Prot:P0ABE7;db_xref=EcoGene:EG50008 EMBL gene 4459900 4460364 . - . ID=.9201;gene=nrdG;locus_tag=b4237;gene_synonym=ECK4232;gene_synonym=JW4196;gene_synonym=yjgE;db_xref=EcoGene:EG12523 EMBL CDS 4459900 4460364 . - 0 ID=.9202;gene=nrdG;locus_tag=b4237;gene_synonym=ECK4232;gene_synonym=JW4196;gene_synonym=yjgE;function=enzyme%3B Central intermediary metabolism: Nucleotide interconversions;note=GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion%3B GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=anaerobic ribonucleotide reductase activating protein;protein_id=AAC77194.1;db_xref=GI:1790685;db_xref=ASAP:ABE-0013860;db_xref=UniProtKB/Swiss-Prot:P0A9N8;db_xref=EcoGene:EG12523 EMBL repeat_region 4460415 4460498 . + . ID=.9203;note=REP338 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 4460522 4462660 . - . ID=.9204;gene=nrdD;locus_tag=b4238;gene_synonym=ECK4233;gene_synonym=JW4197;db_xref=EcoGene:EG11417 EMBL CDS 4460522 4462660 . - 0 ID=.9205;gene=nrdD;locus_tag=b4238;gene_synonym=ECK4233;gene_synonym=JW4197;ec_number=1.17.4.2;function=enzyme%3B 2'-Deoxyribonucleotide metabolism;experiment=N-terminus verified by Edman degradation: PMID 8421692;codon_start=1;transl_table=11;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=AAC77195.1;db_xref=GI:1790686;db_xref=ASAP:ABE-0013865;db_xref=UniProtKB/Swiss-Prot:P28903;db_xref=EcoGene:EG11417 EMBL gene 4463054 4464709 . - . ID=.9206;gene=treC;locus_tag=b4239;gene_synonym=ECK4234;gene_synonym=JW4198;gene_synonym=olgH;gene_synonym=treE;db_xref=EcoGene:EG11402 EMBL CDS 4463054 4464709 . - 0 ID=.9207;gene=treC;locus_tag=b4239;gene_synonym=ECK4234;gene_synonym=JW4198;gene_synonym=olgH;gene_synonym=treE;ec_number=3.2.1.93;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=trehalase 6-P hydrolase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=trehalose-6-P hydrolase;protein_id=AAC77196.1;db_xref=GI:1790687;db_xref=ASAP:ABE-0013870;db_xref=UniProtKB/Swiss-Prot:P28904;db_xref=EcoGene:EG11402 EMBL gene 4464759 4466180 . - . ID=.9208;gene=treB;locus_tag=b4240;gene_synonym=ECK4235;gene_synonym=JW4199;db_xref=EcoGene:EG12127 EMBL CDS 4464759 4466180 . - 0 ID=.9209;gene=treB;locus_tag=b4240;gene_synonym=ECK4235;gene_synonym=JW4199;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=PTS system enzyme II%2C trehalose specific%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006006 - glucose metabolic process;codon_start=1;transl_table=11;product=trehalose-specific PTS enzyme: IIB and IIC component;protein_id=AAC77197.1;db_xref=GI:2367362;db_xref=ASAP:ABE-0013872;db_xref=UniProtKB/Swiss-Prot:P36672;db_xref=EcoGene:EG12127 EMBL gene 4466299 4467246 . - . ID=.9210;gene=treR;locus_tag=b4241;gene_synonym=ECK4236;gene_synonym=JW4200;db_xref=EcoGene:EG12202 EMBL CDS 4466299 4467246 . - 0 ID=.9211;gene=treR;locus_tag=b4241;gene_synonym=ECK4236;gene_synonym=JW4200;function=regulator%3B Osmotic adaptation;note=repressor of treA%2CB%2CC%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006006 - glucose metabolic process%3B GO_process: GO:0006350 - transcription%3B GO_process: GO:0006970 - response to osmotic stress;codon_start=1;transl_table=11;product=trehalose 6-phosphate-inducible trehalose regulon transcriptional repressor;protein_id=AAC77198.1;db_xref=GI:1790689;db_xref=ASAP:ABE-0013875;db_xref=UniProtKB/Swiss-Prot:P36673;db_xref=EcoGene:EG12202 EMBL gene 4467431 4467484 . + . ID=.9212;gene=mgtL;locus_tag=b4702;gene_synonym=ECK4513;db_xref=EcoGene:EG14498 EMBL CDS 4467431 4467484 . + 0 ID=.9213;gene=mgtL;locus_tag=b4702;gene_synonym=ECK4513;codon_start=1;transl_table=11;product=regulatory leader peptide for mgtA;protein_id=ADO17949.1;db_xref=GI:308199521;db_xref=UniProtKB/Swiss-Prot:E2JKY7;db_xref=EcoGene:EG14498 EMBL gene 4467625 4470321 . + . ID=.9214;gene=mgtA;locus_tag=b4242;gene_synonym=corB;gene_synonym=ECK4237;gene_synonym=JW4201;gene_synonym=mgt;db_xref=EcoGene:EG12525 EMBL CDS 4467625 4470321 . + 0 ID=.9215;gene=mgtA;locus_tag=b4242;gene_synonym=corB;gene_synonym=ECK4237;gene_synonym=JW4201;gene_synonym=mgt;ec_number=3.6.3.1;function=enzyme%3B Transport of small molecules: Cations;note=Mg2+ transport ATPase%2C P-type 1%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_function: GO:0015662 - ATPase activity%2C coupled to transmembrane movement of ions%2C phosphorylative mechanism%3B GO_process: GO:0015986 - ATP synthesis coupled proton transport;codon_start=1;transl_table=11;product=magnesium transporter;protein_id=AAC77199.1;db_xref=GI:2367363;db_xref=ASAP:ABE-0013883;db_xref=UniProtKB/Swiss-Prot:P0ABB8;db_xref=EcoGene:EG12525 EMBL repeat_region 4470381 4470468 . + . ID=.9216;note=RIP339 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 4470527 4470913 . - . ID=.9217;gene=ridA;locus_tag=b4243;gene_synonym=ECK4238;gene_synonym=JW5755;gene_synonym=yjgF;db_xref=EcoGene:EG12524 EMBL CDS 4470527 4470913 . - 0 ID=.9218;gene=ridA;locus_tag=b4243;gene_synonym=ECK4238;gene_synonym=JW5755;gene_synonym=yjgF;codon_start=1;transl_table=11;product=enamine/imine deaminase%2C reaction intermediate detoxification;protein_id=AAC77200.2;db_xref=GI:87082396;db_xref=ASAP:ABE-0013886;db_xref=UniProtKB/Swiss-Prot:P0AF93;db_xref=EcoGene:EG12524 EMBL gene 4470986 4471447 . - . ID=.9219;gene=pyrI;locus_tag=b4244;gene_synonym=ECK4239;gene_synonym=JW4203;db_xref=EcoGene:EG10811 EMBL CDS 4470986 4471447 . - 0 ID=.9220;gene=pyrI;locus_tag=b4244;gene_synonym=ECK4239;gene_synonym=JW4203;function=enzyme%3B Pyrimidine ribonucleotide biosynthesis;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006221 - pyrimidine nucleotide biosynthetic process;codon_start=1;transl_table=11;product=aspartate carbamoyltransferase%2C regulatory subunit;protein_id=AAC77201.1;db_xref=GI:1790692;db_xref=ASAP:ABE-0013889;db_xref=UniProtKB/Swiss-Prot:P0A7F3;db_xref=EcoGene:EG10811 EMBL gene 4471460 4472395 . - . ID=.9221;gene=pyrB;locus_tag=b4245;gene_synonym=ECK4240;gene_synonym=JW4204;db_xref=EcoGene:EG10805 EMBL CDS 4471460 4472395 . - 0 ID=.9222;gene=pyrB;locus_tag=b4245;gene_synonym=ECK4240;gene_synonym=JW4204;ec_number=2.1.3.2;function=enzyme%3B Pyrimidine ribonucleotide biosynthesis;note=GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=aspartate carbamoyltransferase%2C catalytic subunit;protein_id=AAC77202.1;db_xref=GI:2367364;db_xref=ASAP:ABE-0013892;db_xref=UniProtKB/Swiss-Prot:P0A786;db_xref=EcoGene:EG10805 EMBL gene 4472399 4472533 . - . ID=.9223;gene=pyrL;locus_tag=b4246;gene_synonym=ECK4241;gene_synonym=JW4205;db_xref=EcoGene:EG11279 EMBL CDS 4472399 4472533 . - 0 ID=.9224;gene=pyrL;locus_tag=b4246;gene_synonym=ECK4241;gene_synonym=JW4205;function=leader%3B Pyrimidine ribonucleotide biosynthesis;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006221 - pyrimidine nucleotide biosynthetic process;codon_start=1;transl_table=11;product=pyrBI operon leader peptide;protein_id=AAC77203.1;db_xref=GI:1790694;db_xref=ASAP:ABE-0013899;db_xref=UniProtKB/Swiss-Prot:P0AD83;db_xref=EcoGene:EG11279 EMBL gene 4472814 4473209 . - . ID=.9225;gene=yjgH;locus_tag=b4248;gene_synonym=ECK4242;gene_synonym=JW4206;db_xref=EcoGene:EG12527 EMBL CDS 4472814 4473209 . - 0 ID=.9226;gene=yjgH;locus_tag=b4248;gene_synonym=ECK4242;gene_synonym=JW4206;note=GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=UPF0131 family protein;protein_id=AAC77205.1;db_xref=GI:1790696;db_xref=ASAP:ABE-0013905;db_xref=UniProtKB/Swiss-Prot:P39332;db_xref=EcoGene:EG12527 EMBL gene 4473340 4474053 . - . ID=.9227;gene=bdcA;locus_tag=b4249;gene_synonym=ECK4243;gene_synonym=JW4207;gene_synonym=yjgI;db_xref=EcoGene:EG12528 EMBL CDS 4473340 4474053 . - 0 ID=.9228;gene=bdcA;locus_tag=b4249;gene_synonym=ECK4243;gene_synonym=JW4207;gene_synonym=yjgI;function=regulator%3B Not classified;note=putative oxidoreductase;codon_start=1;transl_table=11;product=c-di-GMP-binding biofilm dispersal mediator protein;protein_id=AAC77206.1;db_xref=GI:2367365;db_xref=ASAP:ABE-0013909;db_xref=UniProtKB/Swiss-Prot:P39333;db_xref=EcoGene:EG12528 EMBL gene 4474124 4474717 . + . ID=.9229;gene=bdcR;locus_tag=b4251;gene_synonym=ECK4244;gene_synonym=JW4208;gene_synonym=yjgJ;db_xref=EcoGene:EG12529 EMBL CDS 4474124 4474717 . + 0 ID=.9230;gene=bdcR;locus_tag=b4251;gene_synonym=ECK4244;gene_synonym=JW4208;gene_synonym=yjgJ;function=regulator%3B Not classified;codon_start=1;transl_table=11;product=transcriptional repressor for divergent bdcA;protein_id=AAC77208.2;db_xref=GI:87082397;db_xref=ASAP:ABE-0013918;db_xref=UniProtKB/Swiss-Prot:P39334;db_xref=EcoGene:EG12529 EMBL gene 4474862 4475314 . + . ID=.9231;gene=tabA;locus_tag=b4252;gene_synonym=ECK4245;gene_synonym=JW5756;gene_synonym=yjgK;db_xref=EcoGene:EG12530 EMBL CDS 4474862 4475314 . + 0 ID=.9232;gene=tabA;locus_tag=b4252;gene_synonym=ECK4245;gene_synonym=JW5756;gene_synonym=yjgK;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=biofilm modulator regulated by toxins%3B DUF386 family protein%2C cupin superfamily protein;protein_id=AAC77209.2;db_xref=GI:87082398;db_xref=ASAP:ABE-0013921;db_xref=UniProtKB/Swiss-Prot:P0AF96;db_xref=EcoGene:EG12530 EMBL gene 4475437 4477251 . + . ID=.9233;gene=yjgL;locus_tag=b4253;gene_synonym=ECK4246;gene_synonym=JW5757;db_xref=EcoGene:EG12531 EMBL CDS 4475437 4477251 . + 0 ID=.9234;gene=yjgL;locus_tag=b4253;gene_synonym=ECK4246;gene_synonym=JW5757;codon_start=1;transl_table=11;product=SopA-central-domain-like hexapeptide repeat protein;protein_id=AAC77210.2;db_xref=GI:87082399;db_xref=ASAP:ABE-0013925;db_xref=UniProtKB/Swiss-Prot:P39336;db_xref=EcoGene:EG12531 EMBL gene 4477307 4478311 . - . ID=.9235;gene=argI;locus_tag=b4254;gene_synonym=ECK4247;gene_synonym=JW4211;db_xref=EcoGene:EG10069 EMBL CDS 4477307 4478311 . - 0 ID=.9236;gene=argI;locus_tag=b4254;gene_synonym=ECK4247;gene_synonym=JW4211;ec_number=2.1.3.3;function=enzyme%3B Amino acid biosynthesis: Arginine;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006526 - arginine biosynthetic process;codon_start=1;transl_table=11;product=ornithine carbamoyltransferase 1;protein_id=AAC77211.1;db_xref=GI:1790703;db_xref=ASAP:ABE-0013927;db_xref=UniProtKB/Swiss-Prot:P04391;db_xref=EcoGene:EG10069 EMBL gene 4478473 4478889 . + . ID=.9237;gene=rraB;locus_tag=b4255;gene_synonym=ECK4248;gene_synonym=JW4212;gene_synonym=yjgD;db_xref=EcoGene:EG12453 EMBL CDS 4478473 4478889 . + 0 ID=.9238;gene=rraB;locus_tag=b4255;gene_synonym=ECK4248;gene_synonym=JW4212;gene_synonym=yjgD;codon_start=1;transl_table=11;product=protein inhibitor of RNase E;protein_id=AAC77212.1;db_xref=GI:1790704;db_xref=ASAP:ABE-0013936;db_xref=UniProtKB/Swiss-Prot:P0AF90;db_xref=EcoGene:EG12453 EMBL repeat_region 4478939 4478972 . + . ID=.9239;note=REP340 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 4479034 4479537 . - . ID=.9240;gene=yjgM;locus_tag=b4256;gene_synonym=ECK4249;gene_synonym=JW5758;db_xref=EcoGene:EG12532 EMBL CDS 4479034 4479537 . - 0 ID=.9241;gene=yjgM;locus_tag=b4256;gene_synonym=ECK4249;gene_synonym=JW5758;note=putative acyltransferase;codon_start=1;transl_table=11;product=GNAT family putative N-acetyltransferase;protein_id=AAT48245.1;db_xref=GI:48995002;db_xref=ASAP:ABE-0013939;db_xref=UniProtKB/Swiss-Prot:P39337;db_xref=EcoGene:EG12532 EMBL gene 4479730 4480926 . + . ID=.9242;gene=yjgN;locus_tag=b4257;gene_synonym=ECK4250;gene_synonym=JW5759;db_xref=EcoGene:EG12533 EMBL CDS 4479730 4480926 . + 0 ID=.9243;gene=yjgN;locus_tag=b4257;gene_synonym=ECK4250;gene_synonym=JW5759;note=GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=DUF898 family inner membrane protein;protein_id=AAT48246.1;db_xref=GI:48995003;db_xref=ASAP:ABE-0013944;db_xref=UniProtKB/Swiss-Prot:P39338;db_xref=EcoGene:EG12533 EMBL repeat_region 4480939 4480956 . + . ID=.9244;note=REP341 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 4480982 4483837 . - . ID=.9245;gene=valS;locus_tag=b4258;gene_synonym=ECK4251;gene_synonym=JW4215;gene_synonym=val-act;db_xref=EcoGene:EG11067 EMBL CDS 4480982 4483837 . - 0 ID=.9246;gene=valS;locus_tag=b4258;gene_synonym=ECK4251;gene_synonym=JW4215;gene_synonym=val-act;ec_number=6.1.1.9;function=enzyme%3B Aminoacyl tRNA synthetases%2C tRNA modification;experiment=N-terminus verified by Edman degradation: PMID 9298646;note=valine tRNA synthetase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006418 - tRNA aminoacylation for protein translation;codon_start=1;transl_table=11;product=valyl-tRNA synthetase;protein_id=AAC77215.1;db_xref=GI:1790708;db_xref=ASAP:ABE-0013946;db_xref=UniProtKB/Swiss-Prot:P07118;db_xref=EcoGene:EG11067 EMBL gene 4483837 4484280 . - . ID=.9247;gene=holC;locus_tag=b4259;gene_synonym=ECK4252;gene_synonym=JW4216;db_xref=EcoGene:EG11413 EMBL CDS 4483837 4484280 . - 0 ID=.9248;gene=holC;locus_tag=b4259;gene_synonym=ECK4252;gene_synonym=JW4216;ec_number=2.7.7.7;function=enzyme%3B DNA - replication%2C repair%2C restriction/modification;experiment=N-terminus verified by Edman degradation: PMID 8246893%2C8389364;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006261 - DNA-dependent DNA replication;codon_start=1;transl_table=11;product=DNA polymerase III%2C chi subunit;protein_id=AAC77216.1;db_xref=GI:1790709;db_xref=ASAP:ABE-0013948;db_xref=UniProtKB/Swiss-Prot:P28905;db_xref=EcoGene:EG11413 EMBL repeat_region 4484333 4484416 . + . ID=.9249;note=REP342 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 4484440 4485951 . - . ID=.9250;gene=pepA;locus_tag=b4260;gene_synonym=carP;gene_synonym=ECK4253;gene_synonym=JW4217;gene_synonym=xerB;db_xref=EcoGene:EG10694 EMBL CDS 4484440 4485951 . - 0 ID=.9251;gene=pepA;locus_tag=b4260;gene_synonym=carP;gene_synonym=ECK4253;gene_synonym=JW4217;gene_synonym=xerB;ec_number=3.4.11.1;function=enzyme%3B Degradation of proteins%2C peptides%2C glyco;experiment=N-terminus verified by Edman degradation: PMID 2670557;note=aminopeptidase A/I%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006310 - DNA recombination%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=multifunctional aminopeptidase A: a cyteinylglycinase%2C transcription regulator and site-specific recombination factor;protein_id=AAC77217.1;db_xref=GI:1790710;db_xref=ASAP:ABE-0013953;db_xref=UniProtKB/Swiss-Prot:P68767;db_xref=EcoGene:EG10694 EMBL gene 4486218 4487318 . + . ID=.9252;gene=lptF;locus_tag=b4261;gene_synonym=ECK4254;gene_synonym=JW4218;gene_synonym=yjgP;db_xref=EcoGene:EG12535 EMBL CDS 4486218 4487318 . + 0 ID=.9253;gene=lptF;locus_tag=b4261;gene_synonym=ECK4254;gene_synonym=JW4218;gene_synonym=yjgP;note=GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=lipopolysaccharide export ABC permease;protein_id=AAC77218.1;db_xref=GI:1790712;db_xref=ASAP:ABE-0013958;db_xref=UniProtKB/Swiss-Prot:P0AF98;db_xref=EcoGene:EG12535 EMBL gene 4487318 4488400 . + . ID=.9254;gene=lptG;locus_tag=b4262;gene_synonym=ECK4255;gene_synonym=JW5760;gene_synonym=yjgQ;db_xref=EcoGene:EG12536 EMBL CDS 4487318 4488400 . + 0 ID=.9255;gene=lptG;locus_tag=b4262;gene_synonym=ECK4255;gene_synonym=JW5760;gene_synonym=yjgQ;note=GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=lipopolysaccharide export ABC permease;protein_id=AAC77219.2;db_xref=GI:87082400;db_xref=ASAP:ABE-0013960;db_xref=UniProtKB/Swiss-Prot:P0ADC6;db_xref=EcoGene:EG12536 EMBL repeat_region 4488505 4488540 . + . ID=.9256;note=REP343 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 4488561 4490063 . - . ID=.9257;gene=yjgR;locus_tag=b4263;gene_synonym=ECK4256;gene_synonym=JW4220;db_xref=EcoGene:EG12537 EMBL CDS 4488561 4490063 . - 0 ID=.9258;gene=yjgR;locus_tag=b4263;gene_synonym=ECK4256;gene_synonym=JW4220;codon_start=1;transl_table=11;product=DUF853 family protein with NTPase fold;protein_id=AAC77220.1;db_xref=GI:1790714;db_xref=ASAP:ABE-0013963;db_xref=UniProtKB/Swiss-Prot:P39342;db_xref=EcoGene:EG12537 EMBL gene 4490141 4491139 . - . ID=.9259;gene=idnR;locus_tag=b4264;gene_synonym=ECK4257;gene_synonym=gntH;gene_synonym=gntS?;gene_synonym=JW4221;gene_synonym=yjgS;db_xref=EcoGene:EG12538 EMBL CDS 4490141 4491139 . - 0 ID=.9260;gene=idnR;locus_tag=b4264;gene_synonym=ECK4257;gene_synonym=gntH;gene_synonym=gntS?;gene_synonym=JW4221;gene_synonym=yjgS;function=putative regulator%3B Not classified;note=GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=transcriptional repressor%2C 5-gluconate-binding;protein_id=AAC77221.1;db_xref=GI:1790715;db_xref=ASAP:ABE-0013966;db_xref=UniProtKB/Swiss-Prot:P39343;db_xref=EcoGene:EG12538 EMBL gene 4491206 4492525 . - . ID=.9261;gene=idnT;locus_tag=b4265;gene_synonym=ECK4258;gene_synonym=gntW;gene_synonym=JW4222;gene_synonym=yjgT;db_xref=EcoGene:EG12539 EMBL CDS 4491206 4492525 . - 0 ID=.9262;gene=idnT;locus_tag=b4265;gene_synonym=ECK4258;gene_synonym=gntW;gene_synonym=JW4222;gene_synonym=yjgT;function=putative transport%3B Not classified;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=L-idonate and D-gluconate transporter;protein_id=AAC77222.1;db_xref=GI:1790716;db_xref=ASAP:ABE-0013969;db_xref=UniProtKB/Swiss-Prot:P39344;db_xref=EcoGene:EG12539 EMBL gene 4492587 4493351 . - . ID=.9263;gene=idnO;locus_tag=b4266;gene_synonym=ECK4259;gene_synonym=JW4223;gene_synonym=yjgU;db_xref=EcoGene:EG12540 EMBL CDS 4492587 4493351 . - 0 ID=.9264;gene=idnO;locus_tag=b4266;gene_synonym=ECK4259;gene_synonym=JW4223;gene_synonym=yjgU;ec_number=1.1.1.69;function=putative enzyme%3B Not classified;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=5-keto-D-gluconate-5-reductase;protein_id=AAC77223.1;db_xref=GI:1790717;db_xref=ASAP:ABE-0013971;db_xref=UniProtKB/Swiss-Prot:P0A9P9;db_xref=EcoGene:EG12540 EMBL gene 4493375 4494406 . - . ID=.9265;gene=idnD;locus_tag=b4267;gene_synonym=ECK4260;gene_synonym=JW4224;gene_synonym=yjgV;db_xref=EcoGene:EG12541 EMBL CDS 4493375 4494406 . - 0 ID=.9266;gene=idnD;locus_tag=b4267;gene_synonym=ECK4260;gene_synonym=JW4224;gene_synonym=yjgV;ec_number=1.1.1.264;function=putative enzyme%3B Not classified;note=GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=L-idonate 5-dehydrogenase%2C NAD-binding;protein_id=AAC77224.1;db_xref=GI:1790718;db_xref=ASAP:ABE-0013975;db_xref=UniProtKB/Swiss-Prot:P39346;db_xref=EcoGene:EG12541 EMBL gene 4494623 4495186 . + . ID=.9267;gene=idnK;locus_tag=b4268;gene_synonym=ECK4261;gene_synonym=gntV;gene_synonym=JW4225;db_xref=EcoGene:EG12152 EMBL CDS 4494623 4495186 . + 0 ID=.9268;gene=idnK;locus_tag=b4268;gene_synonym=ECK4261;gene_synonym=gntV;gene_synonym=JW4225;ec_number=2.7.1.12;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=D-gluconate kinase%2C thermosensitive;protein_id=AAC77225.1;db_xref=GI:1790719;db_xref=ASAP:ABE-0013980;db_xref=UniProtKB/Swiss-Prot:P39208;db_xref=EcoGene:EG12152 EMBL gene 4495190 4496209 . - . ID=.9269;gene=ahr;locus_tag=b4269;gene_synonym=ECK4262;gene_synonym=JW5761;gene_synonym=yjgB;db_xref=EcoGene:EG11436 EMBL CDS 4495190 4496209 . - 0 ID=.9270;gene=ahr;locus_tag=b4269;gene_synonym=ECK4262;gene_synonym=JW5761;gene_synonym=yjgB;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=putative oxidoreductase;codon_start=1;transl_table=11;product=broad specificity NADPH-dependent aldehyde reductase%2C Zn-containing;protein_id=AAC77226.2;db_xref=GI:87082401;db_xref=ASAP:ABE-0013982;db_xref=UniProtKB/Swiss-Prot:P27250;db_xref=EcoGene:EG11436 EMBL gene 4496405 4496489 . + . ID=.9271;gene=leuX;locus_tag=b4270;gene_synonym=ECK4263;gene_synonym=JWR0115;gene_synonym=Su-6;gene_synonym=supP;db_xref=EcoGene:EG30053 EMBL tRNA 4496405 4496489 . + . ID=.9272;gene=leuX;locus_tag=b4270;gene_synonym=ECK4263;gene_synonym=JWR0115;gene_synonym=Su-6;gene_synonym=supP;product=tRNA-Leu;note=anticodon: UAA;db_xref=ASAP:ABE-0013986;db_xref=EcoGene:EG30053 EMBL gene 4496675 4497940 . + . ID=.9273;gene=intB;locus_tag=b4271;gene_synonym=ECK4264;gene_synonym=int;gene_synonym=JW4227;gene_synonym=yjgC;pseudo=true;db_xref=EcoGene:EG12364 EMBL CDS 4496675 4497940 . + 0 ID=.9274;gene=intB;locus_tag=b4271;gene_synonym=ECK4264;gene_synonym=int;gene_synonym=JW4227;gene_synonym=yjgC;note=pseudogene%2C integrase homology%3BIS%2C phage%2C Tn%3B Phage-related functions and prophages%3B KpLE2 phage-like element%3B P4-like integrase;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0013992;db_xref=UniProtKB/Swiss-Prot:P39347;db_xref=EcoGene:EG12364 EMBL sequence_feature 4498181 4499511 . + . ID=.9275;note=*mobile_element_type: insertion sequence:IS2K EMBL gene 4498272 4498637 . + . ID=.9276;gene=insC1;locus_tag=b4272;gene_synonym=ECK0357;db_xref=EcoGene:EG40003 EMBL CDS 4498272 4498637 . + 0 ID=.9277;gene=insC1;locus_tag=b4272;gene_synonym=ECK0357;function=IS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;codon_start=1;transl_table=11;product=IS2 repressor TnpA;protein_id=AAC77228.2;db_xref=GI:145693215;db_xref=ASAP:ABE-0013999;db_xref=UniProtKB/Swiss-Prot:P0CF45;db_xref=EcoGene:EG40003 EMBL gene 4498595 4499500 . + . ID=.9278;gene=insD1;locus_tag=b4273;gene_synonym=ECK0358;db_xref=EcoGene:EG40004 EMBL CDS 4498595 4499500 . + 0 ID=.9279;gene=insD1;locus_tag=b4273;gene_synonym=ECK0358;function=IS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;codon_start=1;transl_table=11;product=IS2 transposase TnpB;protein_id=AAC77229.1;db_xref=GI:1790724;db_xref=ASAP:ABE-0014001;db_xref=UniProtKB/Swiss-Prot:P0CF58;db_xref=EcoGene:EG40004 EMBL gene 4499593 4500791 . - . ID=.9280;gene=yjgX;locus_tag=b4575;old_locus_tag=b4274;gene_synonym=ECK4266;gene_synonym=JW4234;gene_synonym=JW5763;gene_synonym=JW5764;gene_synonym=yjgW;gene_synonym=yjgY;pseudo=true;db_xref=EcoGene:EG12543 EMBL biological_region 4499593 4500791 . - 0 ID=.9281;featflags=type:CDS;gene=yjgX;locus_tag=b4575;old_locus_tag=b4274;gene_synonym=ECK4266;gene_synonym=JW4234;gene_synonym=JW5763;gene_synonym=JW5764;gene_synonym=yjgW;gene_synonym=yjgY;note=pseudogene fragment%3B GO_component: GO:0009274 - peptidoglycan-based cell wall;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0014007;db_xref=ASAP:ABE-0014009;db_xref=ASAP:ABE-0285081;db_xref=ASAP:ABE-0285108;db_xref=UniProtKB/Swiss-Prot:P39349;db_xref=EcoGene:EG12543 EMBL CDS 4499593 4500534 . - 0 Parent=.9281 EMBL CDS 4500534 4500791 . - 0 Parent=.9281 EMBL gene 4501260 4501589 . + . ID=.9284;gene=yjgZ;locus_tag=b4277;gene_synonym=ECK4267;gene_synonym=JW4236;db_xref=EcoGene:EG12603 EMBL CDS 4501260 4501589 . + 0 ID=.9285;gene=yjgZ;locus_tag=b4277;gene_synonym=ECK4267;gene_synonym=JW4236;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC77233.1;db_xref=GI:1790728;db_xref=ASAP:ABE-0014018;db_xref=UniProtKB/Swiss-Prot:P39351;db_xref=EcoGene:EG12603 EMBL sequence_feature 4502090 4503515 . - . ID=.9286;note=*mobile_element_type: insertion sequence:IS4 EMBL gene 4502103 4503431 . - . ID=.9287;gene=insG;locus_tag=b4278;gene_synonym=ECK4268;db_xref=EcoGene:EG40007 EMBL CDS 4502103 4503431 . - 0 ID=.9288;gene=insG;locus_tag=b4278;gene_synonym=ECK4268;function=IS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;codon_start=1;transl_table=11;product=IS4 transposase;protein_id=AAC77234.1;db_xref=GI:1790729;db_xref=ASAP:ABE-0014021;db_xref=UniProtKB/Swiss-Prot:P03835;db_xref=EcoGene:EG40007 EMBL gene 4504058 4505275 . + . ID=.9289;gene=yjhB;locus_tag=b4279;gene_synonym=ECK4269;gene_synonym=JW5768;db_xref=EcoGene:EG12544 EMBL CDS 4504058 4505275 . + 0 ID=.9290;gene=yjhB;locus_tag=b4279;gene_synonym=ECK4269;gene_synonym=JW5768;function=putative transport%3B Not classified;note=putative transport protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative MFS transporter%2C membrane protein;protein_id=AAC77235.2;db_xref=GI:87082404;db_xref=ASAP:ABE-0014025;db_xref=UniProtKB/Swiss-Prot:P39352;db_xref=EcoGene:EG12544 EMBL gene 4505287 4506405 . + . ID=.9291;gene=yjhC;locus_tag=b4280;gene_synonym=ECK4270;gene_synonym=JW5769;db_xref=EcoGene:EG12545 EMBL CDS 4505287 4506405 . + 0 ID=.9292;gene=yjhC;locus_tag=b4280;gene_synonym=ECK4270;gene_synonym=JW5769;function=orf%3B Not classified;note=putative dehydrogenase;codon_start=1;transl_table=11;product=GFO/IDH/MOCA family putative oxidoreductase. NAD(P)-dependent;protein_id=AAC77236.2;db_xref=GI:87082405;db_xref=ASAP:ABE-0014027;db_xref=UniProtKB/Swiss-Prot:P39353;db_xref=EcoGene:EG12545 EMBL gene 4506448 4506573 . + . ID=.9293;gene=ythA;locus_tag=b4655;gene_synonym=ECK4434;db_xref=EcoGene:EG14464 EMBL CDS 4506448 4506573 . + 0 ID=.9294;gene=ythA;locus_tag=b4655;gene_synonym=ECK4434;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=ABV59575.1;db_xref=GI:157672247;db_xref=UniProtKB/Swiss-Prot:A8DYQ1;db_xref=EcoGene:EG14464 EMBL gene 4506626 4506856 . - . ID=.9295;gene=yjhD;locus_tag=b4281;gene_synonym=ECK4271;gene_synonym=JW5770;pseudo=true;db_xref=EcoGene:EG12546 EMBL CDS 4506626 4506856 . - 0 ID=.9296;gene=yjhD;locus_tag=b4281;gene_synonym=ECK4271;gene_synonym=JW5770;note=pseudogene%2C KpLE2 phage-like element;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0014029;db_xref=UniProtKB/Swiss-Prot:P39354;db_xref=EcoGene:EG12546 EMBL gene 4506861 4507109 . + . ID=.9297;gene=yjhE;locus_tag=b4282;gene_synonym=ECK4272;gene_synonym=JW4242;pseudo=true;db_xref=EcoGene:EG12547 EMBL CDS 4506861 4507109 . + 0 ID=.9298;gene=yjhE;locus_tag=b4282;gene_synonym=ECK4272;gene_synonym=JW4242;note=pseudogene%2C KpLE2 phage-like element;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0014033;db_xref=UniProtKB/Swiss-Prot:P39355;db_xref=EcoGene:EG12547 EMBL sequence_feature 4507125 4507458 . + . ID=.9299;note=*mobile_element_type: insertion sequence:IS911B EMBL biological_region 4507197 4509793 . + . ID=.9300;featflags=type:gene;gene=insO;locus_tag=b4623;gene_synonym=ECK4476;gene_synonym=insN2;gene_synonym=ORFAB;gene_synonym=yjhW;pseudo=true;db_xref=EcoGene:EG40121 EMBL gene 4507197 4507451 . + . Parent=.9300 EMBL gene 4509009 4509479 . + . Parent=.9300 EMBL gene 4509479 4509793 . + . Parent=.9300 EMBL biological_region 4507197 4509793 . + 0 ID=.9304;featflags=type:CDS;gene=insO;locus_tag=b4623;gene_synonym=ECK4476;gene_synonym=insN2;gene_synonym=ORFAB;gene_synonym=yjhW;note=pseudogene%2C IS911 transposase B%3BIS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0014040;db_xref=EcoGene:EG40121 EMBL CDS 4507197 4507451 . + 0 Parent=.9304 EMBL CDS 4509009 4509479 . + 0 Parent=.9304 EMBL CDS 4509479 4509793 . + 0 Parent=.9304 EMBL sequence_feature 4507459 4508679 . - . ID=.9308;note=*mobile_element_type: insertion sequence:IS30D EMBL gene 4507466 4508617 . - . ID=.9309;gene=insI1;locus_tag=b4284;gene_synonym=ECK0258;db_xref=EcoGene:EG40009 EMBL CDS 4507466 4508617 . - 0 ID=.9310;gene=insI1;locus_tag=b4284;gene_synonym=ECK0258;function=IS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;codon_start=1;transl_table=11;product=IS30 transposase;protein_id=AAC77240.1;db_xref=GI:1790736;db_xref=ASAP:ABE-0014045;db_xref=UniProtKB/Swiss-Prot:P0CF90;db_xref=EcoGene:EG40009 EMBL gene 4508676 4508942 . - . ID=.9311;gene=insM;locus_tag=b4561;gene_synonym=ECK4273;pseudo=true;db_xref=EcoGene:EG40013 EMBL CDS 4508676 4508942 . - 0 ID=.9312;gene=insM;locus_tag=b4561;gene_synonym=ECK4273;note=pseudogene%2C IS600 transposase%3BIS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0285082;db_xref=EcoGene:EG40013 EMBL sequence_feature 4508680 4509006 . - . ID=.9313;note=*mobile_element_type: insertion sequence:IS600 EMBL sequence_feature 4509007 4509801 . + . ID=.9314;note=*mobile_element_type: insertion sequence:IS911B EMBL gene 4509804 4510133 . + . ID=.9315;gene=yjhV;locus_tag=b4286;gene_synonym=ECK4276;gene_synonym=JW4246;pseudo=true;db_xref=EcoGene:EG14409 EMBL CDS 4509804 4510133 . + 0 ID=.9316;gene=yjhV;locus_tag=b4286;gene_synonym=ECK4276;gene_synonym=JW4246;note=pseudogene%2C KpLE2 phage-like element;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0014055;db_xref=UniProtKB/Swiss-Prot:Q47719;db_xref=EcoGene:EG14409 EMBL gene 4510690 4511457 . - . ID=.9317;gene=fecE;locus_tag=b4287;gene_synonym=ECK4277;gene_synonym=JW4247;db_xref=EcoGene:EG10290 EMBL CDS 4510690 4511457 . - 0 ID=.9318;gene=fecE;locus_tag=b4287;gene_synonym=ECK4277;gene_synonym=JW4247;function=transport%3B Transport of small molecules: Cations;note=ATP-binding component of citrate-dependent iron(III) transport protein%3B ATP-binding component of ABC superfamily%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006826 - iron ion transport;codon_start=1;transl_table=11;product=ferric citrate ABC transporter ATPase;protein_id=AAC77243.1;db_xref=GI:1790739;db_xref=ASAP:ABE-0014057;db_xref=UniProtKB/Swiss-Prot:P15031;db_xref=EcoGene:EG10290 EMBL gene 4511458 4512414 . - . ID=.9319;gene=fecD;locus_tag=b4288;gene_synonym=ECK4278;gene_synonym=JW4248;db_xref=EcoGene:EG10289 EMBL CDS 4511458 4512414 . - 0 ID=.9320;gene=fecD;locus_tag=b4288;gene_synonym=ECK4278;gene_synonym=JW4248;function=transport%3B Transport of small molecules: Cations;note=citrate-dependent iron transport%2C membrane-bound protein%3B membrane component of ABC superfamily%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=ferric citrate ABC transporter permease;protein_id=AAC77244.1;db_xref=GI:1790740;db_xref=ASAP:ABE-0014059;db_xref=UniProtKB/Swiss-Prot:P15029;db_xref=EcoGene:EG10289 EMBL gene 4512411 4513409 . - . ID=.9321;gene=fecC;locus_tag=b4289;gene_synonym=ECK4279;gene_synonym=JW4249;db_xref=EcoGene:EG10288 EMBL CDS 4512411 4513409 . - 0 ID=.9322;gene=fecC;locus_tag=b4289;gene_synonym=ECK4279;gene_synonym=JW4249;function=transport%3B Transport of small molecules: Cations;note=citrate-dependent iron(III) transport protein%2C cytosolic%3B membrane component of ABC superfamily%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006826 - iron ion transport;codon_start=1;transl_table=11;product=ferric citrate ABC transporter permease;protein_id=AAC77245.1;db_xref=GI:1790741;db_xref=ASAP:ABE-0014063;db_xref=UniProtKB/Swiss-Prot:P15030;db_xref=EcoGene:EG10288 EMBL gene 4513406 4514308 . - . ID=.9323;gene=fecB;locus_tag=b4290;gene_synonym=ECK4280;gene_synonym=JW4250;db_xref=EcoGene:EG10287 EMBL CDS 4513406 4514308 . - 0 ID=.9324;gene=fecB;locus_tag=b4290;gene_synonym=ECK4280;gene_synonym=JW4250;function=transport%3B Transport of small molecules: Cations;note=citrate-dependent iron transport%2C periplasmic protein%3B periplasmic-binding component of ABC superfamily%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0006826 - iron ion transport;codon_start=1;transl_table=11;product=ferric citrate ABC transporter periplasmic binding protein;protein_id=AAC77246.2;db_xref=GI:87082411;db_xref=ASAP:ABE-0014065;db_xref=UniProtKB/Swiss-Prot:P15028;db_xref=EcoGene:EG10287 EMBL gene 4514353 4516677 . - . ID=.9325;gene=fecA;locus_tag=b4291;gene_synonym=ECK4281;gene_synonym=JW4251;db_xref=EcoGene:EG10286 EMBL CDS 4514353 4516677 . - 0 ID=.9326;gene=fecA;locus_tag=b4291;gene_synonym=ECK4281;gene_synonym=JW4251;function=membrane%3B Transport of small molecules: Cations;note=outer membrane receptor%3B citrate-dependent iron transport%2C outer membrane receptor%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane%3B GO_process: GO:0006826 - iron ion transport;codon_start=1;transl_table=11;product=TonB-dependent outer membrane ferric citrate transporter and signal transducer%3B ferric citrate extracelluar receptor%3B FecR-interacting protein;protein_id=AAC77247.1;db_xref=GI:1790743;db_xref=ASAP:ABE-0014067;db_xref=UniProtKB/Swiss-Prot:P13036;db_xref=EcoGene:EG10286 EMBL gene 4516764 4517717 . - . ID=.9327;gene=fecR;locus_tag=b4292;gene_synonym=ECK4282;gene_synonym=JW4252;db_xref=EcoGene:EG10292 EMBL CDS 4516764 4517717 . - 0 ID=.9328;gene=fecR;locus_tag=b4292;gene_synonym=ECK4282;gene_synonym=JW4252;function=regulator%3B Transport of small molecules: Cations;note=regulator for fec operon%2C periplasmic%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006350 - transcription%3B GO_process: GO:0006826 - iron ion transport;codon_start=1;transl_table=11;product=anti-sigma transmembrane signal transducer for ferric citrate transport%3B periplasmic FecA-bound ferric citrate sensor and cytoplasmic FecI ECF sigma factor activator;protein_id=AAC77248.1;db_xref=GI:1790745;db_xref=ASAP:ABE-0014070;db_xref=UniProtKB/Swiss-Prot:P23485;db_xref=EcoGene:EG10292 EMBL gene 4517714 4518235 . - . ID=.9329;gene=fecI;locus_tag=b4293;gene_synonym=ECK4283;gene_synonym=JW4253;db_xref=EcoGene:EG10291 EMBL CDS 4517714 4518235 . - 0 ID=.9330;gene=fecI;locus_tag=b4293;gene_synonym=ECK4283;gene_synonym=JW4253;function=regulator%3B Global regulatory functions;note=probable RNA polymerase sigma factor%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=RNA polymerase sigma-19 factor%2C fec operon-specific%3B ECF sigma factor;protein_id=AAC77249.1;db_xref=GI:1790746;db_xref=ASAP:ABE-0014072;db_xref=UniProtKB/Swiss-Prot:P23484;db_xref=EcoGene:EG10291 EMBL sequence_feature 4518472 4519239 . + . ID=.9331;note=*mobile_element_type: insertion sequence:IS1F EMBL gene 4518527 4518802 . + . ID=.9332;gene=insA;locus_tag=b4294;gene_synonym=ECK4562;note=insA6;db_xref=EcoGene:EG40001 EMBL CDS 4518527 4518802 . + 0 ID=.9333;gene=insA;locus_tag=b4294;gene_synonym=ECK4562;function=IS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;codon_start=1;transl_table=11;product=IS1 repressor TnpA;protein_id=AAC77250.1;db_xref=GI:1790747;db_xref=ASAP:ABE-0014077;db_xref=UniProtKB/Swiss-Prot:P0CF12;db_xref=EcoGene:EG40001 EMBL gene 4518721 4519224 . + . ID=.9334;gene=insB1;locus_tag=b4576;gene_synonym=ECK0022;pseudo=true;db_xref=EcoGene:EG40002 EMBL CDS 4518721 4519224 . + 0 ID=.9335;gene=insB1;locus_tag=b4576;gene_synonym=ECK0022;note=IS1 transposase B%3BIS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0285109;db_xref=UniProtKB/Swiss-Prot:P0CF29;db_xref=EcoGene:EG40002 EMBL gene 4519338 4520324 . - . ID=.9336;gene=yjhU;locus_tag=b4295;gene_synonym=ECK4284;gene_synonym=JW5952;db_xref=EcoGene:EG12604 EMBL CDS 4519338 4520324 . - 0 ID=.9337;gene=yjhU;locus_tag=b4295;gene_synonym=ECK4284;gene_synonym=JW5952;function=putative regulator%3B Not classified;note=GO_process: GO:0006355 - regulation of transcription%2C DNA-dependent;codon_start=1;transl_table=11;product=putative DNA-binding transcriptional regulator%3B KpLE2 phage-like element;protein_id=AAC77251.2;db_xref=GI:87082414;db_xref=ASAP:ABE-0014079;db_xref=UniProtKB/Swiss-Prot:P39356;db_xref=EcoGene:EG12604 EMBL gene 4520671 4522020 . - . ID=.9338;gene=yjhF;locus_tag=b4296;gene_synonym=ECK4285;gene_synonym=JW4258;db_xref=EcoGene:EG12548 EMBL CDS 4520671 4522020 . - 0 ID=.9339;gene=yjhF;locus_tag=b4296;gene_synonym=ECK4285;gene_synonym=JW4258;function=putative transport%3B Not classified;note=putative transport system permease%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative transporter;protein_id=AAC77252.1;db_xref=GI:2367370;db_xref=ASAP:ABE-0014084;db_xref=UniProtKB/Swiss-Prot:P39357;db_xref=EcoGene:EG12548 EMBL gene 4522127 4524094 . - . ID=.9340;gene=yjhG;locus_tag=b4297;gene_synonym=ECK4286;gene_synonym=JW4259;db_xref=EcoGene:EG12549 EMBL CDS 4522127 4524094 . - 0 ID=.9341;gene=yjhG;locus_tag=b4297;gene_synonym=ECK4286;gene_synonym=JW4259;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=putative dehydratase;protein_id=AAC77253.1;db_xref=GI:2367371;db_xref=ASAP:ABE-0014087;db_xref=UniProtKB/Swiss-Prot:P39358;db_xref=EcoGene:EG12549 EMBL gene 4524105 4525010 . - . ID=.9342;gene=yjhH;locus_tag=b4298;gene_synonym=ECK4287;gene_synonym=JW5775;db_xref=EcoGene:EG12550 EMBL CDS 4524105 4525010 . - 0 ID=.9343;gene=yjhH;locus_tag=b4298;gene_synonym=ECK4287;gene_synonym=JW5775;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=putative lyase/synthase;protein_id=AAC77254.2;db_xref=GI:87082415;db_xref=ASAP:ABE-0014089;db_xref=UniProtKB/Swiss-Prot:P39359;db_xref=EcoGene:EG12550 EMBL gene 4525015 4525803 . - . ID=.9344;gene=yjhI;locus_tag=b4299;gene_synonym=ECK4288;gene_synonym=JW4261;db_xref=EcoGene:EG12551 EMBL CDS 4525015 4525803 . - 0 ID=.9345;gene=yjhI;locus_tag=b4299;gene_synonym=ECK4288;gene_synonym=JW4261;function=putative regulator%3B Not classified;note=putative regulator%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=putative DNA-binding transcriptional regulator;protein_id=AAC77255.1;db_xref=GI:1790752;db_xref=ASAP:ABE-0014092;db_xref=UniProtKB/Swiss-Prot:P39360;db_xref=EcoGene:EG12551 EMBL gene 4526106 4526888 . - . ID=.9346;gene=sgcR;locus_tag=b4300;gene_synonym=ECK4289;gene_synonym=JW4262;gene_synonym=yjhJ;db_xref=EcoGene:EG12552 EMBL CDS 4526106 4526888 . - 0 ID=.9347;gene=sgcR;locus_tag=b4300;gene_synonym=ECK4289;gene_synonym=JW4262;gene_synonym=yjhJ;function=putative regulator%3B Not classified;note=putative DEOR-type transcriptional regulator%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=putative DNA-binding transcriptional regulator;protein_id=AAC77256.1;db_xref=GI:1790753;db_xref=ASAP:ABE-0014094;db_xref=UniProtKB/Swiss-Prot:P39361;db_xref=EcoGene:EG12552 EMBL gene 4526905 4527537 . - . ID=.9348;gene=sgcE;locus_tag=b4301;gene_synonym=ECK4290;gene_synonym=JW4263;gene_synonym=yjhK;db_xref=EcoGene:EG12553 EMBL CDS 4526905 4527537 . - 0 ID=.9349;gene=sgcE;locus_tag=b4301;gene_synonym=ECK4290;gene_synonym=JW4263;gene_synonym=yjhK;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=putative epimerase;protein_id=AAC77257.1;db_xref=GI:1790754;db_xref=ASAP:ABE-0014097;db_xref=UniProtKB/Swiss-Prot:P39362;db_xref=EcoGene:EG12553 EMBL gene 4527549 4527980 . - . ID=.9350;gene=sgcA;locus_tag=b4302;gene_synonym=ECK4291;gene_synonym=JW4264;gene_synonym=yjhL;db_xref=EcoGene:EG12554 EMBL CDS 4527549 4527980 . - 0 ID=.9351;gene=sgcA;locus_tag=b4302;gene_synonym=ECK4291;gene_synonym=JW4264;gene_synonym=yjhL;function=putative transport%3B Not classified;note=putative PTS system enzyme II A component;codon_start=1;transl_table=11;product=putative phosphotransferase enzyme IIA component;protein_id=AAC77258.1;db_xref=GI:1790755;db_xref=ASAP:ABE-0014100;db_xref=UniProtKB/Swiss-Prot:P39363;db_xref=EcoGene:EG12554 EMBL gene 4527977 4528066 . + . ID=.9352;gene=ryjB;locus_tag=b4624;gene_synonym=ECK4431;db_xref=EcoGene:EG31181 EMBL ncRNA 4527977 4528066 . + . ID=.9353;ncrna_class=other;gene=ryjB;locus_tag=b4624;gene_synonym=ECK4431;product=novel sRNA%2C function unknown;db_xref=EcoGene:EG31181 EMBL gene 4528111 4528917 . - . ID=.9354;gene=sgcQ;locus_tag=b4303;gene_synonym=ECK4292;gene_synonym=JW4265;gene_synonym=yjhM;db_xref=EcoGene:EG12555 EMBL CDS 4528111 4528917 . - 0 ID=.9355;gene=sgcQ;locus_tag=b4303;gene_synonym=ECK4292;gene_synonym=JW4265;gene_synonym=yjhM;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=putative nucleoside triphosphatase;protein_id=AAC77259.1;db_xref=GI:1790757;db_xref=ASAP:ABE-0014102;db_xref=UniProtKB/Swiss-Prot:P39364;db_xref=EcoGene:EG12555 EMBL gene 4528930 4530243 . - . ID=.9356;gene=sgcC;locus_tag=b4304;gene_synonym=ECK4293;gene_synonym=JW4266;gene_synonym=yjhN;db_xref=EcoGene:EG12556 EMBL CDS 4528930 4530243 . - 0 ID=.9357;gene=sgcC;locus_tag=b4304;gene_synonym=ECK4293;gene_synonym=JW4266;gene_synonym=yjhN;function=putative transport%3B Not classified;note=putative PTS system enzyme IIC component%3B GO_process: GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system;codon_start=1;transl_table=11;product=putative PTS system EIIC permease component;protein_id=AAC77260.1;db_xref=GI:1790758;db_xref=ASAP:ABE-0014105;db_xref=UniProtKB/Swiss-Prot:P39365;db_xref=EcoGene:EG12556 EMBL gene 4530255 4530533 . - . ID=.9358;gene=sgcB;locus_tag=b4565;gene_synonym=ECK4294;gene_synonym=JW5967;db_xref=EcoGene:EG14343 EMBL CDS 4530255 4530533 . - 0 ID=.9359;gene=sgcB;locus_tag=b4565;gene_synonym=ECK4294;gene_synonym=JW5967;note=GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=putative enzyme IIB component of PTS;protein_id=ABD18717.1;db_xref=GI:87082416;db_xref=ASAP:ABE-0285086;db_xref=UniProtKB/Swiss-Prot:P58035;db_xref=EcoGene:EG14343 EMBL gene 4530530 4531651 . - . ID=.9360;gene=sgcX;locus_tag=b4305;gene_synonym=ECK4295;gene_synonym=JW5776;gene_synonym=yjhO;db_xref=EcoGene:EG12557 EMBL CDS 4530530 4531651 . - 0 ID=.9361;gene=sgcX;locus_tag=b4305;gene_synonym=ECK4295;gene_synonym=JW5776;gene_synonym=yjhO;function=putative enzyme%3B Not classified;note=putative lyase/synthase;codon_start=1;transl_table=11;product=putative endoglucanase with Zn-dependent exopeptidase domain;protein_id=AAC77261.2;db_xref=GI:87082417;db_xref=ASAP:ABE-0014112;db_xref=UniProtKB/Swiss-Prot:P39366;db_xref=EcoGene:EG12557 EMBL gene 4532050 4532310 . - . ID=.9362;gene=yjhY;locus_tag=b4656;gene_synonym=ECK4453;pseudo=true;db_xref=EcoGene:EG14442 EMBL CDS 4532050 4532310 . - 0 ID=.9363;gene=yjhY;locus_tag=b4656;gene_synonym=ECK4453;note=pseudogene%2C zinc finger protein family;pseudo=true;codon_start=1;transl_table=11;db_xref=EcoGene:EG14442 EMBL gene 4532437 4533183 . - . ID=.9364;gene=yjhP;locus_tag=b4306;gene_synonym=ECK4296;gene_synonym=JW4268;db_xref=EcoGene:EG12558 EMBL CDS 4532437 4533183 . - 0 ID=.9365;gene=yjhP;locus_tag=b4306;gene_synonym=ECK4296;gene_synonym=JW4268;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=putative methyltransferase;protein_id=AAC77262.1;db_xref=GI:1790760;db_xref=ASAP:ABE-0014115;db_xref=UniProtKB/Swiss-Prot:P39367;db_xref=EcoGene:EG12558 EMBL gene 4533239 4533784 . - . ID=.9366;gene=yjhQ;locus_tag=b4307;gene_synonym=ECK4297;gene_synonym=JW4269;db_xref=EcoGene:EG12559 EMBL CDS 4533239 4533784 . - 0 ID=.9367;gene=yjhQ;locus_tag=b4307;gene_synonym=ECK4297;gene_synonym=JW4269;note=GO_process: GO:0016070 - RNA metabolic process;codon_start=1;transl_table=11;product=GNAT family putative N-acetyltransferase;protein_id=AAC77263.1;db_xref=GI:1790761;db_xref=ASAP:ABE-0014119;db_xref=UniProtKB/Swiss-Prot:P39368;db_xref=EcoGene:EG12559 EMBL gene 4533796 4534053 . - . ID=.9368;gene=yjhX;locus_tag=b4566;gene_synonym=ECK4298;gene_synonym=JW5968;db_xref=EcoGene:EG14430 EMBL CDS 4533796 4534053 . - 0 ID=.9369;gene=yjhX;locus_tag=b4566;gene_synonym=ECK4298;gene_synonym=JW5968;codon_start=1;transl_table=11;product=UPF0386 family protein;protein_id=ABD18718.1;db_xref=GI:87082418;db_xref=ASAP:ABE-0285087;db_xref=UniProtKB/Swiss-Prot:Q2EEU2;db_xref=EcoGene:EG14430 EMBL gene 4534430 4534675 . - . ID=.9370;gene=yjhZ;locus_tag=b4657;gene_synonym=ECK4455;pseudo=true;db_xref=EcoGene:EG14447 EMBL CDS 4534430 4534675 . - 0 ID=.9371;gene=yjhZ;locus_tag=b4657;gene_synonym=ECK4455;note=pseudogene%2C rimK paralog%2C C-terminal fragment;pseudo=true;codon_start=1;transl_table=11;db_xref=EcoGene:EG14447 EMBL gene 4534791 4536031 . + . ID=.9372;gene=yjhR;locus_tag=b4308;gene_synonym=ECK4299;gene_synonym=JW4271;pseudo=true;db_xref=EcoGene:EG12560 EMBL biological_region 4534791 4536031 . + 0 ID=.9373;featflags=type:CDS;gene=yjhR;locus_tag=b4308;gene_synonym=ECK4299;gene_synonym=JW4271;note=pseudogene%2C helicase family%3B putative frameshift suppressor;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0014128;db_xref=UniProtKB/Swiss-Prot:P39369;db_xref=EcoGene:EG12560 EMBL CDS 4534791 4535003 . + 0 Parent=.9373 EMBL CDS 4535003 4536031 . + 0 Parent=.9373 EMBL repeat_region 4536405 4536430 . + . ID=.9376;note=REP344 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 4536614 4537594 . - . ID=.9377;gene=nanS;locus_tag=b4309;gene_synonym=ECK4300;gene_synonym=JW4272;gene_synonym=yjhS;db_xref=EcoGene:EG12561 EMBL CDS 4536614 4537594 . - 0 ID=.9378;gene=nanS;locus_tag=b4309;gene_synonym=ECK4300;gene_synonym=JW4272;gene_synonym=yjhS;codon_start=1;transl_table=11;product=9-O-acetyl N-acetylneuraminic acid esterase;protein_id=AAC77265.1;db_xref=GI:1790763;db_xref=ASAP:ABE-0014130;db_xref=UniProtKB/Swiss-Prot:P39370;db_xref=EcoGene:EG12561 EMBL gene 4537659 4538765 . - . ID=.9379;gene=nanM;locus_tag=b4310;gene_synonym=ECK4301;gene_synonym=JW5777;gene_synonym=yjhT;db_xref=EcoGene:EG12562 EMBL CDS 4537659 4538765 . - 0 ID=.9380;gene=nanM;locus_tag=b4310;gene_synonym=ECK4301;gene_synonym=JW5777;gene_synonym=yjhT;codon_start=1;transl_table=11;product=N-acetylneuraminic acid mutarotase;protein_id=AAC77266.2;db_xref=GI:87082419;db_xref=ASAP:ABE-0014132;db_xref=UniProtKB/Swiss-Prot:P39371;db_xref=EcoGene:EG12562 EMBL gene 4538785 4539501 . - . ID=.9381;gene=nanC;locus_tag=b4311;gene_synonym=ECK4302;gene_synonym=JW5778;gene_synonym=yjhA;db_xref=EcoGene:EG12389 EMBL CDS 4538785 4539501 . - 0 ID=.9382;gene=nanC;locus_tag=b4311;gene_synonym=ECK4302;gene_synonym=JW5778;gene_synonym=yjhA;codon_start=1;transl_table=11;product=N-acetylnuraminic acid outer membrane channel protein;protein_id=AAC77267.2;db_xref=GI:87082420;db_xref=ASAP:ABE-0014136;db_xref=UniProtKB/Swiss-Prot:P69856;db_xref=EcoGene:EG12389 EMBL gene 4540957 4541559 . + . ID=.9383;gene=fimB;locus_tag=b4312;gene_synonym=ECK4303;gene_synonym=JW4275;db_xref=EcoGene:EG10309 EMBL CDS 4540957 4541559 . + 0 ID=.9384;gene=fimB;locus_tag=b4312;gene_synonym=ECK4303;gene_synonym=JW4275;function=regulator%3B Surface structures;note=recombinase involved in phase variation%3B regulator for fimA%3B GO_component: GO:0009289 - pilus%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009297 - pilus assembly%3B GO_process: GO:0006310 - DNA recombination;codon_start=1;transl_table=11;product=tyrosine recombinase/inversion of on/off regulator of fimA;protein_id=AAC77268.1;db_xref=GI:1790767;db_xref=ASAP:ABE-0014141;db_xref=UniProtKB/Swiss-Prot:P0ADH5;db_xref=EcoGene:EG10309 EMBL gene 4542037 4542633 . + . ID=.9385;gene=fimE;locus_tag=b4313;gene_synonym=ECK4304;gene_synonym=hyp;gene_synonym=JW4276;db_xref=EcoGene:EG10312 EMBL CDS 4542037 4542633 . + 0 ID=.9386;gene=fimE;locus_tag=b4313;gene_synonym=ECK4304;gene_synonym=hyp;gene_synonym=JW4276;function=regulator%3B Surface structures;note=recombinase involved in phase variation%3B regulator for fimA%3B GO_component: GO:0009289 - pilus%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009297 - pilus assembly%3B GO_process: GO:0006310 - DNA recombination;codon_start=1;transl_table=11;product=tyrosine recombinase/inversion of on/off regulator of fimA;protein_id=AAC77269.1;db_xref=GI:1790768;db_xref=ASAP:ABE-0014143;db_xref=UniProtKB/Swiss-Prot:P0ADH7;db_xref=EcoGene:EG10312 EMBL gene 4543115 4543663 . + . ID=.9387;gene=fimA;locus_tag=b4314;gene_synonym=ECK4305;gene_synonym=fimD;gene_synonym=JW4277;gene_synonym=pilA;db_xref=EcoGene:EG10308 EMBL CDS 4543115 4543663 . + 0 ID=.9388;gene=fimA;locus_tag=b4314;gene_synonym=ECK4305;gene_synonym=fimD;gene_synonym=JW4277;gene_synonym=pilA;function=structural component%3B Surface structures;note=GO_component: GO:0009289 - pilus%3B GO_process: GO:0009101 - glycoprotein biosynthetic process;codon_start=1;transl_table=11;product=major type 1 subunit fimbrin (pilin);protein_id=AAC77270.1;db_xref=GI:1790769;db_xref=ASAP:ABE-0014145;db_xref=UniProtKB/Swiss-Prot:P04128;db_xref=EcoGene:EG10308 EMBL gene 4543728 4544267 . + . ID=.9389;gene=fimI;locus_tag=b4315;gene_synonym=ECK4306;gene_synonym=JW5779;db_xref=EcoGene:EG11974 EMBL CDS 4543728 4544267 . + 0 ID=.9390;gene=fimI;locus_tag=b4315;gene_synonym=ECK4306;gene_synonym=JW5779;function=structural component%3B Surface structures;note=fimbrial protein%3B GO_component: GO:0009289 - pilus%3B GO_process: GO:0009101 - glycoprotein biosynthetic process;codon_start=1;transl_table=11;product=fimbrial protein involved in type 1 pilus biosynthesis;protein_id=AAC77271.2;db_xref=GI:87082421;db_xref=ASAP:ABE-0014147;db_xref=UniProtKB/Swiss-Prot:P39264;db_xref=EcoGene:EG11974 EMBL gene 4544304 4545029 . + . ID=.9391;gene=fimC;locus_tag=b4316;gene_synonym=ECK4307;gene_synonym=JW4279;db_xref=EcoGene:EG10310 EMBL CDS 4544304 4545029 . + 0 ID=.9392;gene=fimC;locus_tag=b4316;gene_synonym=ECK4307;gene_synonym=JW4279;function=factor%3B Surface structures;note=periplasmic chaperone%2C required for type 1 fimbriae%3B GO_component: GO:0009289 - pilus%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=periplasmic chaperone;protein_id=AAC77272.1;db_xref=GI:1790771;db_xref=ASAP:ABE-0014149;db_xref=UniProtKB/Swiss-Prot:P31697;db_xref=EcoGene:EG10310 EMBL gene 4545096 4547732 . + . ID=.9393;gene=fimD;locus_tag=b4317;gene_synonym=ECK4308;gene_synonym=JW5780;db_xref=EcoGene:EG10311 EMBL CDS 4545096 4547732 . + 0 ID=.9394;gene=fimD;locus_tag=b4317;gene_synonym=ECK4308;gene_synonym=JW5780;function=membrane%3B Outer membrane constituents;note=outer membrane protein%3B export and assembly of type 1 fimbriae%2C interrupted%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0009279 - cell outer membrane;codon_start=1;transl_table=11;product=fimbrial usher outer membrane porin protein%3B FimCD chaperone-usher;protein_id=AAC77273.1;db_xref=GI:1790772;db_xref=ASAP:ABE-0014151;db_xref=UniProtKB/Swiss-Prot:P30130;db_xref=EcoGene:EG10311 EMBL gene 4547742 4548272 . + . ID=.9395;gene=fimF;locus_tag=b4318;gene_synonym=ECK4309;gene_synonym=JW4281;db_xref=EcoGene:EG10313 EMBL CDS 4547742 4548272 . + 0 ID=.9396;gene=fimF;locus_tag=b4318;gene_synonym=ECK4309;gene_synonym=JW4281;function=structural component%3B Surface structures;note=fimbrial morphology%3B GO_component: GO:0009289 - pilus%3B GO_process: GO:0009101 - glycoprotein biosynthetic process;codon_start=1;transl_table=11;product=minor component of type 1 fimbriae;protein_id=AAC77274.1;db_xref=GI:1790773;db_xref=ASAP:ABE-0014153;db_xref=UniProtKB/Swiss-Prot:P08189;db_xref=EcoGene:EG10313 EMBL gene 4548285 4548788 . + . ID=.9397;gene=fimG;locus_tag=b4319;gene_synonym=ECK4310;gene_synonym=JW4282;db_xref=EcoGene:EG10314 EMBL CDS 4548285 4548788 . + 0 ID=.9398;gene=fimG;locus_tag=b4319;gene_synonym=ECK4310;gene_synonym=JW4282;function=structural component%3B Surface structures;note=fimbrial morphology%3B GO_component: GO:0009289 - pilus%3B GO_process: GO:0009101 - glycoprotein biosynthetic process;codon_start=1;transl_table=11;product=minor component of type 1 fimbriae;protein_id=AAC77275.1;db_xref=GI:1790774;db_xref=ASAP:ABE-0014155;db_xref=UniProtKB/Swiss-Prot:P08190;db_xref=EcoGene:EG10314 EMBL gene 4548808 4549710 . + . ID=.9399;gene=fimH;locus_tag=b4320;gene_synonym=ECK4311;gene_synonym=JW4283;db_xref=EcoGene:EG10315 EMBL CDS 4548808 4549710 . + 0 ID=.9400;gene=fimH;locus_tag=b4320;gene_synonym=ECK4311;gene_synonym=JW4283;function=structural component%3B Surface structures;note=minor fimbrial subunit%2C D-mannose specific adhesin%3B GO_component: GO:0009289 - pilus%3B GO_process: GO:0009101 - glycoprotein biosynthetic process;codon_start=1;transl_table=11;product=minor component of type 1 fimbriae;protein_id=AAC77276.1;db_xref=GI:1790775;db_xref=ASAP:ABE-0014157;db_xref=UniProtKB/Swiss-Prot:P08191;db_xref=EcoGene:EG10315 EMBL repeat_region 4549783 4549818 . + . ID=.9401;note=REP345 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 4549953 4551296 . - . ID=.9402;gene=gntP;locus_tag=b4321;gene_synonym=ECK4312;gene_synonym=JW4284;gene_synonym=yjiB;db_xref=EcoGene:EG12563 EMBL CDS 4549953 4551296 . - 0 ID=.9403;gene=gntP;locus_tag=b4321;gene_synonym=ECK4312;gene_synonym=JW4284;gene_synonym=yjiB;function=transport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols;note=gluconate transport system permease 3%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=fructuronate transporter;protein_id=AAC77277.1;db_xref=GI:1790776;db_xref=ASAP:ABE-0014161;db_xref=UniProtKB/Swiss-Prot:P0AC94;db_xref=EcoGene:EG12563 EMBL gene 4551636 4552820 . + . ID=.9404;gene=uxuA;locus_tag=b4322;gene_synonym=ECK4313;gene_synonym=JW4285;db_xref=EcoGene:EG11066 EMBL CDS 4551636 4552820 . + 0 ID=.9405;gene=uxuA;locus_tag=b4322;gene_synonym=ECK4313;gene_synonym=JW4285;ec_number=4.2.1.8;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=mannonate hydrolase;protein_id=AAC77278.1;db_xref=GI:1790778;db_xref=ASAP:ABE-0014173;db_xref=UniProtKB/Swiss-Prot:P24215;db_xref=EcoGene:EG11066 EMBL gene 4552901 4554361 . + . ID=.9406;gene=uxuB;locus_tag=b4323;gene_synonym=ECK4314;gene_synonym=JW4286;db_xref=EcoGene:EG20248 EMBL CDS 4552901 4554361 . + 0 ID=.9407;gene=uxuB;locus_tag=b4323;gene_synonym=ECK4314;gene_synonym=JW4286;ec_number=1.1.1.57;function=enzyme%3B Degradation of small molecules: Carbon compounds;note=D-mannonate oxidoreductase%3B GO_process: GO:0016052 - carbohydrate catabolic process;codon_start=1;transl_table=11;product=D-mannonate oxidoreductase%2C NAD-dependent;protein_id=AAC77279.1;db_xref=GI:1790779;db_xref=ASAP:ABE-0014175;db_xref=UniProtKB/Swiss-Prot:P39160;db_xref=EcoGene:EG20248 EMBL repeat_region 4554505 4554538 . + . ID=.9408;note=REP346 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 4554576 4555349 . + . ID=.9409;gene=uxuR;locus_tag=b4324;gene_synonym=ECK4315;gene_synonym=JW4287;db_xref=EcoGene:EG20249 EMBL CDS 4554576 4555349 . + 0 ID=.9410;gene=uxuR;locus_tag=b4324;gene_synonym=ECK4315;gene_synonym=JW4287;function=regulator%3B Degradation of small molecules: Carbon compounds;note=regulator for uxu operon%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=fructuronate-inducible hexuronate regulon transcriptional repressor%3B autorepressor;protein_id=AAC77280.1;db_xref=GI:1790780;db_xref=ASAP:ABE-0014179;db_xref=UniProtKB/Swiss-Prot:P39161;db_xref=EcoGene:EG20249 EMBL gene 4555490 4556320 . - . ID=.9411;gene=yjiC;locus_tag=b4325;gene_synonym=ECK4316;gene_synonym=JW4288;db_xref=EcoGene:EG12564 EMBL CDS 4555490 4556320 . - 0 ID=.9412;gene=yjiC;locus_tag=b4325;gene_synonym=ECK4316;gene_synonym=JW4288;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC77281.1;db_xref=GI:1790781;db_xref=ASAP:ABE-0014181;db_xref=UniProtKB/Swiss-Prot:P39374;db_xref=EcoGene:EG12564 EMBL gene 4556993 4557385 . + . ID=.9413;gene=iraD;locus_tag=b4326;gene_synonym=ECK4317;gene_synonym=JW5782;gene_synonym=yjiD;db_xref=EcoGene:EG12565 EMBL CDS 4556993 4557385 . + 0 ID=.9414;gene=iraD;locus_tag=b4326;gene_synonym=ECK4317;gene_synonym=JW5782;gene_synonym=yjiD;codon_start=1;transl_table=11;product=RpoS stabilzer after DNA damage%2C anti-RssB factor;protein_id=AAC77282.2;db_xref=GI:87082422;db_xref=ASAP:ABE-0014190;db_xref=UniProtKB/Swiss-Prot:P39375;db_xref=EcoGene:EG12565 EMBL gene 4557378 4558289 . - . ID=.9415;gene=hypT;locus_tag=b4327;gene_synonym=ECK4318;gene_synonym=JW4290;gene_synonym=qseD;gene_synonym=yjiE;db_xref=EcoGene:EG12566 EMBL CDS 4557378 4558289 . - 0 ID=.9416;gene=hypT;locus_tag=b4327;gene_synonym=ECK4318;gene_synonym=JW4290;gene_synonym=qseD;gene_synonym=yjiE;function=regulator%3B Global regulatory functions;note=putative transcriptional regulator LYSR-type%3B GO_function: GO:0016563 - transcription activator activity%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=hypochlorite-responsive transcription factor;protein_id=AAC77283.1;db_xref=GI:1790783;db_xref=ASAP:ABE-0014192;db_xref=UniProtKB/Swiss-Prot:P39376;db_xref=EcoGene:EG12566 EMBL gene 4558354 4559526 . - . ID=.9417;gene=iadA;locus_tag=b4328;gene_synonym=ECK4319;gene_synonym=JW4291;gene_synonym=yjiF;db_xref=EcoGene:EG12567 EMBL CDS 4558354 4559526 . - 0 ID=.9418;gene=iadA;locus_tag=b4328;gene_synonym=ECK4319;gene_synonym=JW4291;gene_synonym=yjiF;ec_number=3.4.19.5;function=enzyme%3B Degradation of proteins%2C peptides%2C glyco;experiment=N-terminus verified by Edman degradation: PMID 7876157;codon_start=1;transl_table=11;product=isoaspartyl dipeptidase;protein_id=AAC77284.1;db_xref=GI:1790784;db_xref=ASAP:ABE-0014195;db_xref=UniProtKB/Swiss-Prot:P39377;db_xref=EcoGene:EG12567 EMBL gene 4559539 4560000 . - . ID=.9419;gene=yjiG;locus_tag=b4329;gene_synonym=ECK4320;gene_synonym=JW4292;db_xref=EcoGene:EG12568 EMBL CDS 4559539 4560000 . - 0 ID=.9420;gene=yjiG;locus_tag=b4329;gene_synonym=ECK4320;gene_synonym=JW4292;codon_start=1;transl_table=11;product=SpmB family inner membrane protein;protein_id=AAC77285.1;db_xref=GI:1790785;db_xref=ASAP:ABE-0014197;db_xref=UniProtKB/Swiss-Prot:P0AEH8;db_xref=EcoGene:EG12568 EMBL gene 4559997 4560680 . - . ID=.9421;gene=yjiH;locus_tag=b4330;gene_synonym=ECK4321;gene_synonym=JW5783;db_xref=EcoGene:EG12569 EMBL CDS 4559997 4560680 . - 0 ID=.9422;gene=yjiH;locus_tag=b4330;gene_synonym=ECK4321;gene_synonym=JW5783;codon_start=1;transl_table=11;product=nucleoside recognition pore and gate family putative inner membrane transporter;protein_id=AAC77286.2;db_xref=GI:87082423;db_xref=ASAP:ABE-0014201;db_xref=UniProtKB/Swiss-Prot:P39379;db_xref=EcoGene:EG12569 EMBL gene 4560930 4561484 . + . ID=.9423;gene=kptA;locus_tag=b4331;gene_synonym=ECK4322;gene_synonym=JW5784;gene_synonym=yjiI;db_xref=EcoGene:EG12570 EMBL CDS 4560930 4561484 . + 0 ID=.9424;gene=kptA;locus_tag=b4331;gene_synonym=ECK4322;gene_synonym=JW5784;gene_synonym=yjiI;ec_number=2.7.-.-;note=GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=RNA 2'-phosphotransferase;protein_id=AAC77287.2;db_xref=GI:87082424;db_xref=ASAP:ABE-0014204;db_xref=UniProtKB/Swiss-Prot:P39380;db_xref=EcoGene:EG12570 EMBL gene 4561497 4562675 . - . ID=.9425;gene=yjiJ;locus_tag=b4332;gene_synonym=ECK4323;gene_synonym=JW4295;db_xref=EcoGene:EG12571 EMBL CDS 4561497 4562675 . - 0 ID=.9426;gene=yjiJ;locus_tag=b4332;gene_synonym=ECK4323;gene_synonym=JW4295;function=putative transport%3B Not classified;note=putative transport protein;codon_start=1;transl_table=11;product=DUF1228 family putative inner membrane MFS superfamily transporter;protein_id=AAC77288.1;db_xref=GI:1790788;db_xref=ASAP:ABE-0014206;db_xref=UniProtKB/Swiss-Prot:P39381;db_xref=EcoGene:EG12571 EMBL gene 4562743 4563603 . - . ID=.9427;gene=yjiK;locus_tag=b4333;gene_synonym=ECK4324;gene_synonym=JW5869;db_xref=EcoGene:EG12572 EMBL CDS 4562743 4563603 . - 0 ID=.9428;gene=yjiK;locus_tag=b4333;gene_synonym=ECK4324;gene_synonym=JW5869;function=putative enzyme%3B Not classified;note=GO_component: GO:0009279 - cell outer membrane;codon_start=1;transl_table=11;product=SdiA-regulated family putative membrane-anchored protein%3B putative phytase-like esterase;protein_id=AAC77289.3;db_xref=GI:145693216;db_xref=ASAP:ABE-0014209;db_xref=UniProtKB/Swiss-Prot:P39382;db_xref=EcoGene:EG12572 EMBL gene 4563922 4564689 . - . ID=.9429;gene=yjiL;locus_tag=b4334;gene_synonym=ECK4325;gene_synonym=JW5785;db_xref=EcoGene:EG12573 EMBL CDS 4563922 4564689 . - 0 ID=.9430;gene=yjiL;locus_tag=b4334;gene_synonym=ECK4325;gene_synonym=JW5785;function=putative enzyme%3B Not classified;note=putative enzyme;codon_start=1;transl_table=11;product=putative ATPase%2C activator of (R)-hydroxyglutaryl-CoA dehydratase;protein_id=AAC77290.2;db_xref=GI:87082426;db_xref=ASAP:ABE-0014212;db_xref=UniProtKB/Swiss-Prot:P39383;db_xref=EcoGene:EG12573 EMBL gene 4564699 4565850 . - . ID=.9431;gene=yjiM;locus_tag=b4335;gene_synonym=ECK4326;gene_synonym=JW5786;db_xref=EcoGene:EG12574 EMBL CDS 4564699 4565850 . - 0 ID=.9432;gene=yjiM;locus_tag=b4335;gene_synonym=ECK4326;gene_synonym=JW5786;codon_start=1;transl_table=11;product=putative 2-hydroxyglutaryl-CoA dehydratase;protein_id=AAC77291.2;db_xref=GI:87082427;db_xref=ASAP:ABE-0014214;db_xref=UniProtKB/Swiss-Prot:P39384;db_xref=EcoGene:EG12574 EMBL gene 4565966 4567246 . - . ID=.9433;gene=yjiN;locus_tag=b4336;gene_synonym=ECK4327;gene_synonym=JW4299;db_xref=EcoGene:EG12575 EMBL CDS 4565966 4567246 . - 0 ID=.9434;gene=yjiN;locus_tag=b4336;gene_synonym=ECK4327;gene_synonym=JW4299;note=GO_component: GO:0009274 - peptidoglycan-based cell wall;codon_start=1;transl_table=11;product=zinc-type alcohol dehydrogenase-like protein;protein_id=AAC77292.1;db_xref=GI:1790793;db_xref=ASAP:ABE-0014219;db_xref=UniProtKB/Swiss-Prot:P39385;db_xref=EcoGene:EG12575 EMBL gene 4567287 4568519 . - . ID=.9435;gene=mdtM;locus_tag=b4337;gene_synonym=ECK4328;gene_synonym=JW4300;gene_synonym=yjiO;db_xref=EcoGene:EG12576 EMBL CDS 4567287 4568519 . - 0 ID=.9436;gene=mdtM;locus_tag=b4337;gene_synonym=ECK4328;gene_synonym=JW4300;gene_synonym=yjiO;function=putative transport%3B Not classified;note=putative transport protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=multidrug efflux system protein;protein_id=AAC77293.1;db_xref=GI:1790794;db_xref=ASAP:ABE-0014221;db_xref=UniProtKB/Swiss-Prot:P39386;db_xref=EcoGene:EG12576 EMBL gene 4568998 4569918 . + . ID=.9437;gene=yjiP;locus_tag=b4339;gene_synonym=ECK4329;gene_synonym=JW5953;gene_synonym=yjiQ;pseudo=true;db_xref=EcoGene:EG12577 EMBL CDS 4568998 4569918 . + 0 ID=.9438;gene=yjiP;locus_tag=b4339;gene_synonym=ECK4329;gene_synonym=JW5953;gene_synonym=yjiQ;note=pseudogene%2C transposase_31 family protein;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0014227;db_xref=ASAP:ABE-0014229;db_xref=UniProtKB/Swiss-Prot:P39387;db_xref=EcoGene:EG12577 EMBL repeat_region 4569946 4570044 . + . ID=.9439;note=RIP347 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site EMBL gene 4570162 4571574 . - . ID=.9440;gene=yjiR;locus_tag=b4340;gene_synonym=ECK4331;gene_synonym=JW4303;db_xref=EcoGene:EG12579 EMBL CDS 4570162 4571574 . - 0 ID=.9441;gene=yjiR;locus_tag=b4340;gene_synonym=ECK4331;gene_synonym=JW4303;function=putative regulator%3B Not classified;note=putative regulator%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=putative DNA-binding transcriptional regulator/putative aminotransferase;protein_id=AAC77296.1;db_xref=GI:1790797;db_xref=ASAP:ABE-0014232;db_xref=UniProtKB/Swiss-Prot:P39389;db_xref=EcoGene:EG12579 EMBL gene 4571751 4571915 . + . ID=.9442;gene=yjiS;locus_tag=b4341;gene_synonym=ECK4332;gene_synonym=JW4304;db_xref=EcoGene:EG12580 EMBL CDS 4571751 4571915 . + 0 ID=.9443;gene=yjiS;locus_tag=b4341;gene_synonym=ECK4332;gene_synonym=JW4304;codon_start=1;transl_table=11;product=DUF1127 family protein;protein_id=AAC77297.1;db_xref=GI:1790798;db_xref=ASAP:ABE-0014236;db_xref=UniProtKB/Swiss-Prot:P39390;db_xref=EcoGene:EG12580 EMBL gene 4572414 4573916 . + . ID=.9444;gene=yjiT;locus_tag=b4342;gene_synonym=ECK4333;gene_synonym=JW5787;pseudo=true;db_xref=EcoGene:EG12581 EMBL CDS 4572414 4573916 . + 0 ID=.9445;gene=yjiT;locus_tag=b4342;gene_synonym=ECK4333;gene_synonym=JW5787;note=pseudogene;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0014239;db_xref=UniProtKB/Swiss-Prot:P39391;db_xref=EcoGene:EG12581 EMBL gene 4573919 4576855 . + . ID=.9446;gene=yjiV;locus_tag=b4486;gene_synonym=ECK4467;gene_synonym=mcrD;gene_synonym=yjiU;pseudo=true;db_xref=EcoGene:EG12583 EMBL CDS 4573919 4576855 . + 0 ID=.9447;gene=yjiV;locus_tag=b4486;gene_synonym=ECK4467;gene_synonym=mcrD;gene_synonym=yjiU;note=pseudogene%3B conserved hypothetical protein;pseudo=true;codon_start=1;transl_table=11;db_xref=ASAP:ABE-0174119;db_xref=UniProtKB/Swiss-Prot:P39393;db_xref=EcoGene:EG12583 EMBL gene 4576912 4577958 . - . ID=.9448;gene=mcrC;locus_tag=b4345;gene_synonym=ECK4335;gene_synonym=JW5789;db_xref=EcoGene:EG10575 EMBL CDS 4576912 4577958 . - 0 ID=.9449;gene=mcrC;locus_tag=b4345;gene_synonym=ECK4335;gene_synonym=JW5789;ec_number=3.1.21.4;function=enzyme%3B Degradation of DNA;experiment=N-terminus verified by Edman degradation: PMID 2050643;note=component of McrBC 5-methylcytosine restriction system%2C expands range of sequences restricted%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006308 - DNA catabolic process;codon_start=1;transl_table=11;product=5-methylcytosine-specific restriction enzyme McrBC%2C subunit McrC;protein_id=AAC77301.1;db_xref=GI:1790804;db_xref=ASAP:ABE-0014248;db_xref=UniProtKB/Swiss-Prot:P15006;db_xref=EcoGene:EG10575 EMBL gene 4577958 4579337 . - . ID=.9450;gene=mcrB;locus_tag=b4346;gene_synonym=ECK4336;gene_synonym=JW5871;gene_synonym=rglB;db_xref=EcoGene:EG10574 EMBL CDS 4577958 4579337 . - 0 ID=.9451;gene=mcrB;locus_tag=b4346;gene_synonym=ECK4336;gene_synonym=JW5871;gene_synonym=rglB;ec_number=3.1.21.4;function=enzyme%3B Degradation of DNA;experiment=N-terminus verified by Edman degradation: PMID 1312983;note=component of McrBC 5-methylcytosine restriction system%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006308 - DNA catabolic process;codon_start=1;transl_table=11;product=5-methylcytosine-specific restriction enzyme McrBC%2C subunit McrB;protein_id=AAC77302.2;db_xref=GI:87082429;db_xref=ASAP:ABE-0014250;db_xref=UniProtKB/Swiss-Prot:P15005;db_xref=EcoGene:EG10574 EMBL gene 4579499 4579840 . - . ID=.9452;gene=symE;locus_tag=b4347;gene_synonym=dinL;gene_synonym=ECK4337;gene_synonym=JW4310;gene_synonym=sosC;gene_synonym=yjiW;db_xref=EcoGene:EG12584 EMBL CDS 4579499 4579840 . - 0 ID=.9453;gene=symE;locus_tag=b4347;gene_synonym=dinL;gene_synonym=ECK4337;gene_synonym=JW4310;gene_synonym=sosC;gene_synonym=yjiW;note=GO_process: GO:0009432 - SOS response;codon_start=1;transl_table=11;product=toxic peptide regulated by antisense sRNA symR;protein_id=AAC77303.2;db_xref=GI:145693217;db_xref=ASAP:ABE-0014253;db_xref=UniProtKB/Swiss-Prot:P39394;db_xref=EcoGene:EG12584 EMBL gene 4579835 4579911 . + . ID=.9454;gene=symR;locus_tag=b4625;gene_synonym=ECK4432;gene_synonym=ryjC;db_xref=EcoGene:EG31180 EMBL ncRNA 4579835 4579911 . + . ID=.9455;ncrna_class=antisense_RNA;gene=symR;locus_tag=b4625;gene_synonym=ECK4432;gene_synonym=ryjC;product=sRNA antisense regulator destabilizing divergent and overlapping symE mRNA;db_xref=EcoGene:EG31180 EMBL gene 4580068 4581462 . - . ID=.9456;gene=hsdS;locus_tag=b4348;gene_synonym=ECK4338;gene_synonym=hsp;gene_synonym=hss;gene_synonym=JW4311;db_xref=EcoGene:EG10460 EMBL CDS 4580068 4581462 . - 0 ID=.9457;gene=hsdS;locus_tag=b4348;gene_synonym=ECK4338;gene_synonym=hsp;gene_synonym=hss;gene_synonym=JW4311;function=enzyme%3B DNA - replication%2C repair%2C restriction/modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006306 - DNA methylation;codon_start=1;transl_table=11;product=specificity determinant for hsdM and hsdR;protein_id=AAC77304.1;db_xref=GI:1790807;db_xref=ASAP:ABE-0014258;db_xref=UniProtKB/Swiss-Prot:P05719;db_xref=EcoGene:EG10460 EMBL gene 4581459 4583048 . - . ID=.9458;gene=hsdM;locus_tag=b4349;gene_synonym=ECK4339;gene_synonym=hsm;gene_synonym=hsp;gene_synonym=JW4312;db_xref=EcoGene:EG10458 EMBL CDS 4581459 4583048 . - 0 ID=.9459;gene=hsdM;locus_tag=b4349;gene_synonym=ECK4339;gene_synonym=hsm;gene_synonym=hsp;gene_synonym=JW4312;ec_number=2.1.1.72;function=enzyme%3B DNA - replication%2C repair%2C restriction/modification;note=host modification%3B DNA methylase M%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006306 - DNA methylation;codon_start=1;transl_table=11;product=DNA methyltransferase M;protein_id=AAC77305.1;db_xref=GI:1790808;db_xref=ASAP:ABE-0014260;db_xref=UniProtKB/Swiss-Prot:P08957;db_xref=EcoGene:EG10458 EMBL gene 4583249 4586761 . - . ID=.9460;gene=hsdR;locus_tag=b4350;gene_synonym=ECK4340;gene_synonym=hsp;gene_synonym=hsr;gene_synonym=JW4313;db_xref=EcoGene:EG10459 EMBL CDS 4583249 4586761 . - 0 ID=.9461;gene=hsdR;locus_tag=b4350;gene_synonym=ECK4340;gene_synonym=hsp;gene_synonym=hsr;gene_synonym=JW4313;ec_number=3.1.21.3;function=enzyme%3B Degradation of DNA;note=host restriction%3B endonuclease R%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006308 - DNA catabolic process;codon_start=1;transl_table=11;product=endonuclease R Type I restriction enzyme;protein_id=AAC77306.2;db_xref=GI:226510991;db_xref=ASAP:ABE-0014264;db_xref=UniProtKB/Swiss-Prot:P08956;db_xref=EcoGene:EG10459 EMBL gene 4586949 4587863 . + . ID=.9462;gene=mrr;locus_tag=b4351;gene_synonym=ECK4341;gene_synonym=JW4314;gene_synonym=mcrF;db_xref=EcoGene:EG10612 EMBL CDS 4586949 4587863 . + 0 ID=.9463;gene=mrr;locus_tag=b4351;gene_synonym=ECK4341;gene_synonym=JW4314;gene_synonym=mcrF;function=enzyme%3B DNA - replication%2C repair%2C restriction/modification;note=restriction of methylated adenine%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006306 - DNA methylation;codon_start=1;transl_table=11;product=methylated adenine and cytosine restriction protein;protein_id=AAC77307.1;db_xref=GI:1790811;db_xref=ASAP:ABE-0014271;db_xref=UniProtKB/Swiss-Prot:P24202;db_xref=EcoGene:EG10612 EMBL repeat_region 4587872 4587898 . + . ID=.9464;note=REP348 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 4587909 4588865 . - . ID=.9465;gene=yjiA;locus_tag=b4352;gene_synonym=ECK4342;gene_synonym=JW5790;db_xref=EcoGene:EG10021 EMBL CDS 4587909 4588865 . - 0 ID=.9466;gene=yjiA;locus_tag=b4352;gene_synonym=ECK4342;gene_synonym=JW5790;codon_start=1;transl_table=11;product=metal-binding GTPase;protein_id=AAC77308.2;db_xref=GI:87082430;db_xref=ASAP:ABE-0014273;db_xref=UniProtKB/Swiss-Prot:P24203;db_xref=EcoGene:EG10021 EMBL gene 4588876 4589079 . - . ID=.9467;gene=yjiX;locus_tag=b4353;gene_synonym=ECK4343;gene_synonym=JW4316;db_xref=EcoGene:EG12585 EMBL CDS 4588876 4589079 . - 0 ID=.9468;gene=yjiX;locus_tag=b4353;gene_synonym=ECK4343;gene_synonym=JW4316;codon_start=1;transl_table=11;product=DUF466 family protein;protein_id=AAC77309.1;db_xref=GI:1790813;db_xref=ASAP:ABE-0014276;db_xref=UniProtKB/Swiss-Prot:P0ADC8;db_xref=EcoGene:EG12585 EMBL gene 4589129 4591279 . - . ID=.9469;gene=yjiY;locus_tag=b4354;gene_synonym=ECK4344;gene_synonym=JW5791;gene_synonym=oppE?;db_xref=EcoGene:EG12586 EMBL CDS 4589129 4591279 . - 0 ID=.9470;gene=yjiY;locus_tag=b4354;gene_synonym=ECK4344;gene_synonym=JW5791;gene_synonym=oppE?;function=orf%3B Not classified;note=putative carbon starvation protein%3B GO_process: GO:0042594 - response to starvation;codon_start=1;transl_table=11;product=putative transporter;protein_id=AAC77310.2;db_xref=GI:87082431;db_xref=ASAP:ABE-0014278;db_xref=UniProtKB/Swiss-Prot:P39396;db_xref=EcoGene:EG12586 EMBL gene 4591657 4593312 . + . ID=.9471;gene=tsr;locus_tag=b4355;gene_synonym=cheD;gene_synonym=ECK4345;gene_synonym=JW4318;db_xref=EcoGene:EG11034 EMBL CDS 4591657 4593312 . + 0 ID=.9472;gene=tsr;locus_tag=b4355;gene_synonym=cheD;gene_synonym=ECK4345;gene_synonym=JW4318;function=regulator%3B Chemotaxis and mobility;note=GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0042330 - taxis;codon_start=1;transl_table=11;product=methyl-accepting chemotaxis protein I%2C serine sensor receptor;protein_id=AAC77311.1;db_xref=GI:2367378;db_xref=ASAP:ABE-0014282;db_xref=UniProtKB/Swiss-Prot:P02942;db_xref=EcoGene:EG11034 EMBL repeat_region 4593326 4593351 . + . ID=.9473;note=REP349 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 4593361 4594722 . - . ID=.9474;gene=lgoT;locus_tag=b4356;gene_synonym=ECK4346;gene_synonym=JW4319;gene_synonym=yjiZ;gene_synonym=yjjL;db_xref=EcoGene:EG12588 EMBL CDS 4593361 4594722 . - 0 ID=.9475;gene=lgoT;locus_tag=b4356;gene_synonym=ECK4346;gene_synonym=JW4319;gene_synonym=yjiZ;gene_synonym=yjjL;function=putative transport%3B Not classified;note=putative transport protein%2C cryptic%2C orf%2C joins former yjiZ and yjjL%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=putative L-galactonate:H+ symporter;protein_id=AAC77312.1;db_xref=GI:2367379;db_xref=ASAP:ABE-0014284;db_xref=UniProtKB/Swiss-Prot:P39398;db_xref=EcoGene:EG12588 EMBL gene 4594937 4595851 . - . ID=.9476;gene=lgoR;locus_tag=b4357;gene_synonym=ECK4347;gene_synonym=JW5792;gene_synonym=yjjM;db_xref=EcoGene:EG12589 EMBL CDS 4594937 4595851 . - 0 ID=.9477;gene=lgoR;locus_tag=b4357;gene_synonym=ECK4347;gene_synonym=JW5792;gene_synonym=yjjM;note=GO_process: GO:0006355 - regulation of transcription%2C DNA-dependent;codon_start=1;transl_table=11;product=putative transcriptional activator for L-galactonate catabolism;protein_id=AAT48248.1;db_xref=GI:48995005;db_xref=ASAP:ABE-0014287;db_xref=UniProtKB/Swiss-Prot:P39399;db_xref=EcoGene:EG12589 EMBL gene 4595990 4597012 . + . ID=.9478;gene=lgoD;locus_tag=b4358;gene_synonym=ECK4348;gene_synonym=JW5793;gene_synonym=yjjN;db_xref=EcoGene:EG12590 EMBL CDS 4595990 4597012 . + 0 ID=.9479;gene=lgoD;locus_tag=b4358;gene_synonym=ECK4348;gene_synonym=JW5793;gene_synonym=yjjN;function=enzyme%3B L-galactonate catabolism;note=putative oxidoreductase;codon_start=1;transl_table=11;product=L-galactonate oxidoreductase%3B L-gulonate oxidoreductase;protein_id=AAC77314.4;db_xref=GI:226510992;db_xref=ASAP:ABE-0014294;db_xref=UniProtKB/Swiss-Prot:P39400;db_xref=EcoGene:EG12590 EMBL repeat_region 4597097 4597135 . + . ID=.9480;note=REP350 (repetitive extragenic palindromic) element%3B contains 1 REP sequences EMBL gene 4597150 4599441 . - . ID=.9481;gene=opgB;locus_tag=b4359;gene_synonym=ECK4349;gene_synonym=JW5794;gene_synonym=mdoB;gene_synonym=yjjO;db_xref=EcoGene:EG12591 EMBL CDS 4597150 4599441 . - 0 ID=.9482;gene=opgB;locus_tag=b4359;gene_synonym=ECK4349;gene_synonym=JW5794;gene_synonym=mdoB;gene_synonym=yjjO;ec_number=2.7.8.20;function=enzyme%3B Osmoregulated periplasmic glucan (OPG) biosynthesis biolsynthesis;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0008654 - phospholipid biosynthetic process%3B GO_process: GO:0009250 - glucan biosynthetic process%3B GO_process: GO:0006970 - response to osmotic stress;codon_start=1;transl_table=11;product=OPG periplasmic biosynthetic phosphoglycerol transferases I (membrane-bound) and II (soluble);protein_id=AAC77315.2;db_xref=GI:87082433;db_xref=ASAP:ABE-0014297;db_xref=UniProtKB/Swiss-Prot:P39401;db_xref=EcoGene:EG12591 EMBL gene 4599695 4600189 . - . ID=.9483;gene=yjjA;locus_tag=b4360;gene_synonym=ECK4350;gene_synonym=JW5795;db_xref=EcoGene:EG11214 EMBL CDS 4599695 4600189 . - 0 ID=.9484;gene=yjjA;locus_tag=b4360;gene_synonym=ECK4350;gene_synonym=JW5795;function=putative factor%3B Not classified;note=putative glycoprotein/receptor;codon_start=1;transl_table=11;product=putative DUF2501 family periplasmic protein;protein_id=AAC77316.2;db_xref=GI:87082434;db_xref=ASAP:ABE-0014301;db_xref=UniProtKB/Swiss-Prot:P18390;db_xref=EcoGene:EG11214 EMBL gene 4600238 4600975 . - . ID=.9485;gene=dnaC;locus_tag=b4361;gene_synonym=dnaD;gene_synonym=ECK4351;gene_synonym=JW4325;db_xref=EcoGene:EG10237 EMBL CDS 4600238 4600975 . - 0 ID=.9486;gene=dnaC;locus_tag=b4361;gene_synonym=dnaD;gene_synonym=ECK4351;gene_synonym=JW4325;function=enzyme%3B DNA - replication%2C repair%2C restriction/modification;experiment=N-terminus verified by Edman degradation: PMID 3301836;note=chromosome replication%3B initiation and chain elongation%3B GO_process: GO:0006261 - DNA-dependent DNA replication;codon_start=1;transl_table=11;product=DNA biosynthesis protein;protein_id=AAC77317.1;db_xref=GI:1790823;db_xref=ASAP:ABE-0014304;db_xref=UniProtKB/Swiss-Prot:P0AEF0;db_xref=EcoGene:EG10237 EMBL gene 4600978 4601517 . - . ID=.9487;gene=dnaT;locus_tag=b4362;gene_synonym=ECK4352;gene_synonym=JW4326;db_xref=EcoGene:EG10244 EMBL CDS 4600978 4601517 . - 0 ID=.9488;gene=dnaT;locus_tag=b4362;gene_synonym=ECK4352;gene_synonym=JW4326;function=factor%3B DNA - replication%2C repair%2C restriction/modification;note=DNA biosynthesis%3B primosomal protein i%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006261 - DNA-dependent DNA replication;codon_start=1;transl_table=11;product=DNA biosynthesis protein (primosomal protein I);protein_id=AAC77318.1;db_xref=GI:1790824;db_xref=ASAP:ABE-0014306;db_xref=UniProtKB/Swiss-Prot:P0A8J2;db_xref=EcoGene:EG10244 EMBL gene 4601624 4602097 . - . ID=.9489;gene=yjjB;locus_tag=b4363;gene_synonym=ECK4353;gene_synonym=JW4327;db_xref=EcoGene:EG11215 EMBL CDS 4601624 4602097 . - 0 ID=.9490;gene=yjjB;locus_tag=b4363;gene_synonym=ECK4353;gene_synonym=JW4327;codon_start=1;transl_table=11;product=DUF3815 family inner membrane protein;protein_id=AAC77319.2;db_xref=GI:145693219;db_xref=ASAP:ABE-0014310;db_xref=UniProtKB/Swiss-Prot:P0ADD2;db_xref=EcoGene:EG11215 EMBL gene 4602088 4602858 . - . ID=.9491;gene=yjjP;locus_tag=b4364;gene_synonym=ECK4354;gene_synonym=JW5796;db_xref=EcoGene:EG12592 EMBL CDS 4602088 4602858 . - 0 ID=.9492;gene=yjjP;locus_tag=b4364;gene_synonym=ECK4354;gene_synonym=JW5796;function=putative structure%3B Not classified;note=putative structural protein%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=DUF1212 family inner membrane protein;protein_id=AAC77320.2;db_xref=GI:87082435;db_xref=ASAP:ABE-0014313;db_xref=UniProtKB/Swiss-Prot:P0ADD5;db_xref=EcoGene:EG12592 EMBL gene 4603477 4604202 . + . ID=.9493;gene=yjjQ;locus_tag=b4365;gene_synonym=ECK4355;gene_synonym=JW4329;db_xref=EcoGene:EG12593 EMBL CDS 4603477 4604202 . + 0 ID=.9494;gene=yjjQ;locus_tag=b4365;gene_synonym=ECK4355;gene_synonym=JW4329;function=putative regulator%3B Not classified;note=putative regulator;codon_start=1;transl_table=11;product=putative transcriptional regulator;protein_id=AAC77321.1;db_xref=GI:1790827;db_xref=ASAP:ABE-0014322;db_xref=UniProtKB/Swiss-Prot:P0ADD7;db_xref=EcoGene:EG12593 EMBL gene 4604160 4604837 . + . ID=.9495;gene=bglJ;locus_tag=b4366;gene_synonym=ECK4356;gene_synonym=JW5955;gene_synonym=yjjR;db_xref=EcoGene:EG12594 EMBL CDS 4604160 4604837 . + 0 ID=.9496;gene=bglJ;locus_tag=b4366;gene_synonym=ECK4356;gene_synonym=JW5955;gene_synonym=yjjR;function=regulator%3B Not classified;note=2-component transcriptional regulator%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0016052 - carbohydrate catabolic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=bgl operon transcriptional activator;protein_id=AAC77322.4;db_xref=GI:345297181;db_xref=ASAP:ABE-0014324;db_xref=UniProtKB/Swiss-Prot:P39404;db_xref=EcoGene:EG12594 EMBL gene 4604875 4605663 . - . ID=.9497;gene=fhuF;locus_tag=b4367;gene_synonym=ECK4357;gene_synonym=JW4331;gene_synonym=yjjS;db_xref=EcoGene:EG12595 EMBL CDS 4604875 4605663 . - 0 ID=.9498;gene=fhuF;locus_tag=b4367;gene_synonym=ECK4357;gene_synonym=JW4331;gene_synonym=yjjS;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006457 - protein folding;codon_start=1;transl_table=11;product=ferric iron reductase involved in ferric hydroximate transport;protein_id=AAC77323.1;db_xref=GI:1790829;db_xref=ASAP:ABE-0014326;db_xref=UniProtKB/Swiss-Prot:P39405;db_xref=EcoGene:EG12595 EMBL gene 4605804 4606040 . + . ID=.9499;gene=yjjZ;locus_tag=b4567;gene_synonym=ECK4358;gene_synonym=JW5797;db_xref=EcoGene:EG13348 EMBL CDS 4605804 4606040 . + 0 ID=.9500;gene=yjjZ;locus_tag=b4567;gene_synonym=ECK4358;gene_synonym=JW5797;note=GO_component: GO:0016021 - integral to membrane;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=ABD18719.1;db_xref=GI:87082437;db_xref=ASAP:ABE-0285088;db_xref=UniProtKB/Swiss-Prot:P55914;db_xref=EcoGene:EG13348 EMBL gene 4606079 4606165 . - . ID=.9501;gene=leuV;locus_tag=b4368;gene_synonym=ECK4359;gene_synonym=JWR0221;gene_synonym=leuValpha;db_xref=EcoGene:EG30051 EMBL tRNA 4606079 4606165 . - . ID=.9502;gene=leuV;locus_tag=b4368;gene_synonym=ECK4359;gene_synonym=JWR0221;gene_synonym=leuValpha;product=tRNA-Leu;note=anticodon: CAG;db_xref=ASAP:ABE-0014329;db_xref=EcoGene:EG30051 EMBL gene 4606200 4606286 . - . ID=.9503;gene=leuP;locus_tag=b4369;gene_synonym=ECK4360;gene_synonym=JWR0222;gene_synonym=leuVbeta;db_xref=EcoGene:EG30047 EMBL tRNA 4606200 4606286 . - . ID=.9504;gene=leuP;locus_tag=b4369;gene_synonym=ECK4360;gene_synonym=JWR0222;gene_synonym=leuVbeta;product=tRNA-Leu;note=anticodon: CAG;db_xref=ASAP:ABE-0014331;db_xref=EcoGene:EG30047 EMBL gene 4606315 4606401 . - . ID=.9505;gene=leuQ;locus_tag=b4370;gene_synonym=ECK4361;gene_synonym=JWR0223;gene_synonym=leuVgamma;db_xref=EcoGene:EG30048 EMBL tRNA 4606315 4606401 . - . ID=.9506;gene=leuQ;locus_tag=b4370;gene_synonym=ECK4361;gene_synonym=JWR0223;gene_synonym=leuVgamma;product=tRNA-Leu;note=anticodon: CAG;db_xref=ASAP:ABE-0014333;db_xref=EcoGene:EG30048 EMBL repeat_region 4606558 4606649 . + . ID=.9507;note=REP351 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 4606669 4607700 . - . ID=.9508;gene=rsmC;locus_tag=b4371;gene_synonym=ECK4362;gene_synonym=JW4333;gene_synonym=yjjT;db_xref=EcoGene:EG12596 EMBL CDS 4606669 4607700 . - 0 ID=.9509;gene=rsmC;locus_tag=b4371;gene_synonym=ECK4362;gene_synonym=JW4333;gene_synonym=yjjT;ec_number=2.1.1.172;function=enzyme%3B rRNA modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0009451 - RNA modification;codon_start=1;transl_table=11;product=16S rRNA m(2)G1207 methyltransferase%2C SAM-dependent;protein_id=AAC77324.1;db_xref=GI:1790830;db_xref=ASAP:ABE-0014336;db_xref=UniProtKB/Swiss-Prot:P39406;db_xref=EcoGene:EG12596 EMBL gene 4607803 4608216 . + . ID=.9510;gene=holD;locus_tag=b4372;gene_synonym=ECK4363;gene_synonym=JW4334;db_xref=EcoGene:EG11414 EMBL CDS 4607803 4608216 . + 0 ID=.9511;gene=holD;locus_tag=b4372;gene_synonym=ECK4363;gene_synonym=JW4334;ec_number=2.7.7.7;function=enzyme%3B DNA - replication%2C repair%2C restriction/modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006261 - DNA-dependent DNA replication;codon_start=1;transl_table=11;product=DNA polymerase III%2C psi subunit;protein_id=AAC77325.1;db_xref=GI:1790831;db_xref=ASAP:ABE-0014340;db_xref=UniProtKB/Swiss-Prot:P28632;db_xref=EcoGene:EG11414 EMBL gene 4608185 4608631 . + . ID=.9512;gene=rimI;locus_tag=b4373;gene_synonym=ECK4364;gene_synonym=JW4335;db_xref=EcoGene:EG10850 EMBL CDS 4608185 4608631 . + 0 ID=.9513;gene=rimI;locus_tag=b4373;gene_synonym=ECK4364;gene_synonym=JW4335;ec_number=2.3.1.128;function=enzyme%3B Ribosomes - maturation and modification;note=acyltransferase for 30S ribosomal subunit protein S18%3B acetylation of N-terminal alanine%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=ribosomal-protein-S18-alanine N-acetyltransferase;protein_id=AAC77326.1;db_xref=GI:2367381;db_xref=ASAP:ABE-0014342;db_xref=UniProtKB/Swiss-Prot:P0A944;db_xref=EcoGene:EG10850 EMBL gene 4608646 4609323 . + . ID=.9514;gene=yjjG;locus_tag=b4374;gene_synonym=ECK4365;gene_synonym=JW4336;db_xref=EcoGene:EG12115 EMBL CDS 4608646 4609323 . + 0 ID=.9515;gene=yjjG;locus_tag=b4374;gene_synonym=ECK4365;gene_synonym=JW4336;function=enzyme%3B Degradation of small molecules: Nucleotides;note=putative phosphatase;codon_start=1;transl_table=11;product=dUMP phosphatase;protein_id=AAC77327.1;db_xref=GI:1790833;db_xref=ASAP:ABE-0014344;db_xref=UniProtKB/Swiss-Prot:P0A8Y1;db_xref=EcoGene:EG12115 EMBL gene 4609414 4611003 . + . ID=.9516;gene=prfC;locus_tag=b4375;gene_synonym=ECK4366;gene_synonym=JW5873;gene_synonym=miaD;gene_synonym=sra;gene_synonym=srb;gene_synonym=tos;db_xref=EcoGene:EG12114 EMBL CDS 4609414 4611003 . + 0 ID=.9517;gene=prfC;locus_tag=b4375;gene_synonym=ECK4366;gene_synonym=JW5873;gene_synonym=miaD;gene_synonym=sra;gene_synonym=srb;gene_synonym=tos;function=factor%3B Proteins - translation and modification;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006412 - translation;codon_start=1;transl_table=11;product=peptide chain release factor RF-3;protein_id=AAC77328.1;db_xref=GI:1790835;db_xref=ASAP:ABE-0014346;db_xref=UniProtKB/Swiss-Prot:P0A7I4;db_xref=EcoGene:EG12114 EMBL gene 4611396 4612001 . + . ID=.9518;gene=osmY;locus_tag=b4376;gene_synonym=ECK4367;gene_synonym=JW4338;db_xref=EcoGene:EG11391 EMBL CDS 4611396 4612001 . + 0 ID=.9519;gene=osmY;locus_tag=b4376;gene_synonym=ECK4367;gene_synonym=JW4338;function=phenotype%3B Osmotic adaptation;note=hyperosmotically inducible periplasmic protein%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0006970 - response to osmotic stress;codon_start=1;transl_table=11;product=salt-inducible putative ABC transporter periplasmic binding protein;protein_id=AAC77329.1;db_xref=GI:1790836;db_xref=ASAP:ABE-0014348;db_xref=UniProtKB/Swiss-Prot:P0AFH8;db_xref=EcoGene:EG11391 EMBL gene 4612128 4612289 . + . ID=.9520;gene=ytjA;locus_tag=b4568;gene_synonym=ECK4368;gene_synonym=JW5891;db_xref=EcoGene:EG14398 EMBL CDS 4612128 4612289 . + 0 ID=.9521;gene=ytjA;locus_tag=b4568;gene_synonym=ECK4368;gene_synonym=JW5891;note=GO_component: GO:0016021 - integral to membrane;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=ABD18720.2;db_xref=GI:145693221;db_xref=ASAP:ABE-0285089;db_xref=UniProtKB/Swiss-Prot:Q2M5U1;db_xref=EcoGene:EG14398 EMBL gene 4612411 4613484 . + . ID=.9522;gene=yjjU;locus_tag=b4377;gene_synonym=ECK4369;gene_synonym=JW4340;db_xref=EcoGene:EG12597 EMBL CDS 4612411 4613484 . + 0 ID=.9523;gene=yjjU;locus_tag=b4377;gene_synonym=ECK4369;gene_synonym=JW4340;note=GO_process: GO:0006355 - regulation of transcription%2C DNA-dependent;codon_start=1;transl_table=11;product=putative patatin-like family phospholipase;protein_id=AAC77330.1;db_xref=GI:1790837;db_xref=ASAP:ABE-0014351;db_xref=UniProtKB/Swiss-Prot:P39407;db_xref=EcoGene:EG12597 EMBL gene 4613481 4614260 . + . ID=.9524;gene=yjjV;locus_tag=b4378;gene_synonym=ECK4370;gene_synonym=JW4341;db_xref=EcoGene:EG12598 EMBL CDS 4613481 4614260 . + 0 ID=.9525;gene=yjjV;locus_tag=b4378;gene_synonym=ECK4370;gene_synonym=JW4341;codon_start=1;transl_table=11;product=putative DNase;protein_id=AAC77331.2;db_xref=GI:87082439;db_xref=ASAP:ABE-0014356;db_xref=UniProtKB/Swiss-Prot:P39408;db_xref=EcoGene:EG12598 EMBL repeat_region 4614257 4614644 . + . ID=.9526;note=REP352 (repetitive extragenic palindromic) element%3B contains 8 REP sequences EMBL gene 4614680 4615543 . - . ID=.9527;gene=yjjW;locus_tag=b4379;gene_synonym=ECK4371;gene_synonym=JW4342;db_xref=EcoGene:EG12599 EMBL CDS 4614680 4615543 . - 0 ID=.9528;gene=yjjW;locus_tag=b4379;gene_synonym=ECK4371;gene_synonym=JW4342;function=putative enzyme%3B Not classified;note=putative activating enzyme%3B GO_process: GO:0009061 - anaerobic respiration%3B GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=putative pyruvate formate lyase activating enzyme;protein_id=AAC77332.1;db_xref=GI:1790839;db_xref=ASAP:ABE-0014359;db_xref=UniProtKB/Swiss-Prot:P39409;db_xref=EcoGene:EG12599 EMBL gene 4615515 4617065 . - . ID=.9529;gene=yjjI;locus_tag=b4380;gene_synonym=ECK4372;gene_synonym=JW4343;gene_synonym=yjjH;db_xref=EcoGene:EG12171 EMBL CDS 4615515 4617065 . - 0 ID=.9530;gene=yjjI;locus_tag=b4380;gene_synonym=ECK4372;gene_synonym=JW4343;gene_synonym=yjjH;function=putative enzyme%3B Not classified;codon_start=1;transl_table=11;product=DUF3029 family protein%2C putative glycine radical enzyme;protein_id=AAC77333.1;db_xref=GI:1790840;db_xref=ASAP:ABE-0014361;db_xref=UniProtKB/Swiss-Prot:P37342;db_xref=EcoGene:EG12171 EMBL gene 4617323 4618102 . + . ID=.9531;gene=deoC;locus_tag=b4381;gene_synonym=dra;gene_synonym=ECK4373;gene_synonym=JW4344;gene_synonym=thyR;gene_synonym=tlr;db_xref=EcoGene:EG10221 EMBL CDS 4617323 4618102 . + 0 ID=.9532;gene=deoC;locus_tag=b4381;gene_synonym=dra;gene_synonym=ECK4373;gene_synonym=JW4344;gene_synonym=thyR;gene_synonym=tlr;ec_number=4.1.2.4;function=enzyme%3B Salvage of nucleosides and nucleotides;note=2-deoxyribose-5-phosphate aldolase%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion;codon_start=1;transl_table=11;product=2-deoxyribose-5-phosphate aldolase%2C NAD(P)-linked;protein_id=AAC77334.1;db_xref=GI:1790841;db_xref=ASAP:ABE-0014371;db_xref=UniProtKB/Swiss-Prot:P0A6L0;db_xref=EcoGene:EG10221 EMBL repeat_region 4618117 4618198 . + . ID=.9533;note=REP353 (repetitive extragenic palindromic) element%3B contains 2 REP sequences EMBL gene 4618229 4619551 . + . ID=.9534;gene=deoA;locus_tag=b4382;gene_synonym=ECK4374;gene_synonym=JW4345;gene_synonym=TP;gene_synonym=tpp;gene_synonym=ttg;db_xref=EcoGene:EG10219 EMBL CDS 4618229 4619551 . + 0 ID=.9535;gene=deoA;locus_tag=b4382;gene_synonym=ECK4374;gene_synonym=JW4345;gene_synonym=TP;gene_synonym=tpp;gene_synonym=ttg;ec_number=2.4.2.4;function=enzyme%3B Salvage of nucleosides and nucleotides;note=GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion;codon_start=1;transl_table=11;product=thymidine phosphorylase;protein_id=AAC77335.1;db_xref=GI:1790842;db_xref=ASAP:ABE-0014374;db_xref=UniProtKB/Swiss-Prot:P07650;db_xref=EcoGene:EG10219 EMBL gene 4619603 4620826 . + . ID=.9536;gene=deoB;locus_tag=b4383;gene_synonym=drm;gene_synonym=ECK4375;gene_synonym=JW4346;gene_synonym=thyR;gene_synonym=tlr;db_xref=EcoGene:EG10220 EMBL CDS 4619603 4620826 . + 0 ID=.9537;gene=deoB;locus_tag=b4383;gene_synonym=drm;gene_synonym=ECK4375;gene_synonym=JW4346;gene_synonym=thyR;gene_synonym=tlr;ec_number=5.4.2.7;function=enzyme%3B Salvage of nucleosides and nucleotides;experiment=N-terminus verified by Edman degradation: PMID 6087276;note=GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion;codon_start=1;transl_table=11;product=phosphopentomutase;protein_id=AAC77336.1;db_xref=GI:1790843;db_xref=ASAP:ABE-0014377;db_xref=UniProtKB/Swiss-Prot:P0A6K6;db_xref=EcoGene:EG10220 EMBL gene 4620883 4621602 . + . ID=.9538;gene=deoD;locus_tag=b4384;gene_synonym=ECK4376;gene_synonym=JW4347;gene_synonym=pup;db_xref=EcoGene:EG10222 EMBL CDS 4620883 4621602 . + 0 ID=.9539;gene=deoD;locus_tag=b4384;gene_synonym=ECK4376;gene_synonym=JW4347;gene_synonym=pup;ec_number=2.4.2.1;function=enzyme%3B Salvage of nucleosides and nucleotides;note=GO_process: GO:0015949 - nucleobase%2C nucleoside and nucleotide interconversion;codon_start=1;transl_table=11;product=purine nucleoside phosphorylase 1%3B nicotinamide 1-beta-D-riboside phosphorylase;protein_id=AAC77337.1;db_xref=GI:1790844;db_xref=ASAP:ABE-0014379;db_xref=UniProtKB/Swiss-Prot:P0ABP8;db_xref=EcoGene:EG10222 EMBL gene 4621769 4623100 . + . ID=.9540;gene=yjjJ;locus_tag=b4385;gene_synonym=ECK4377;gene_synonym=JW4348;db_xref=EcoGene:EG12342 EMBL CDS 4621769 4623100 . + 0 ID=.9541;gene=yjjJ;locus_tag=b4385;gene_synonym=ECK4377;gene_synonym=JW4348;function=putative enzyme%3B Protein modification;codon_start=1;transl_table=11;product=putative protein kinase;protein_id=AAC77338.1;db_xref=GI:1790845;db_xref=ASAP:ABE-0014383;db_xref=UniProtKB/Swiss-Prot:P39410;db_xref=EcoGene:EG12342 EMBL gene 4623101 4624117 . - . ID=.9542;gene=lplA;locus_tag=b4386;gene_synonym=ECK4378;gene_synonym=JW4349;gene_synonym=slr;gene_synonym=yjjF;db_xref=EcoGene:EG11796 EMBL CDS 4623101 4624117 . - 0 ID=.9543;gene=lplA;locus_tag=b4386;gene_synonym=ECK4378;gene_synonym=JW4349;gene_synonym=slr;gene_synonym=yjjF;ec_number=6.3.2.-;function=enzyme%3B Macromolecule synthesis%2C modification: Lipoprotein;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0042158 - lipoprotein biosynthetic process%3B GO_process: GO:0006418 - tRNA aminoacylation for protein translation;codon_start=1;transl_table=11;product=lipoate-protein ligase A;protein_id=AAC77339.1;db_xref=GI:1790846;db_xref=ASAP:ABE-0014385;db_xref=UniProtKB/Swiss-Prot:P32099;db_xref=EcoGene:EG11796 EMBL gene 4624145 4624789 . - . ID=.9544;gene=ytjB;locus_tag=b4387;gene_synonym=ECK4379;gene_synonym=JW4350;gene_synonym=smp;db_xref=EcoGene:EG10951 EMBL CDS 4624145 4624789 . - 0 ID=.9545;gene=ytjB;locus_tag=b4387;gene_synonym=ECK4379;gene_synonym=JW4350;gene_synonym=smp;function=membrane%3B Not classified;note=GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=SMP_2 family putative membrane-anchored periplasmic protein;protein_id=AAC77340.1;db_xref=GI:1790847;db_xref=ASAP:ABE-0014387;db_xref=UniProtKB/Swiss-Prot:P0AGC7;db_xref=EcoGene:EG10951 EMBL gene 4624895 4625863 . + . ID=.9546;gene=serB;locus_tag=b4388;gene_synonym=ECK4380;gene_synonym=JW4351;db_xref=EcoGene:EG10945 EMBL CDS 4624895 4625863 . + 0 ID=.9547;gene=serB;locus_tag=b4388;gene_synonym=ECK4380;gene_synonym=JW4351;ec_number=3.1.3.3;function=enzyme%3B Amino acid biosynthesis: Serine;note=GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006545 - glycine biosynthetic process%3B GO_process: GO:0006564 - L-serine biosynthetic process;codon_start=1;transl_table=11;product=3-phosphoserine phosphatase;protein_id=AAC77341.1;db_xref=GI:1790849;db_xref=ASAP:ABE-0014393;db_xref=UniProtKB/Swiss-Prot:P0AGB0;db_xref=EcoGene:EG10945 EMBL gene 4625912 4627294 . + . ID=.9548;gene=radA;locus_tag=b4389;gene_synonym=ECK4381;gene_synonym=JW4352;gene_synonym=sms;db_xref=EcoGene:EG11296 EMBL CDS 4625912 4627294 . + 0 ID=.9549;gene=radA;locus_tag=b4389;gene_synonym=ECK4381;gene_synonym=JW4352;gene_synonym=sms;function=putative enzyme%3B Degradation of proteins%2C peptides%2C glycopeptides;note=probable ATP-dependent protease;codon_start=1;transl_table=11;product=DNA repair protein;protein_id=AAC77342.1;db_xref=GI:1790850;db_xref=ASAP:ABE-0014395;db_xref=UniProtKB/Swiss-Prot:P24554;db_xref=EcoGene:EG11296 EMBL gene 4627315 4628547 . + . ID=.9550;gene=nadR;locus_tag=b4390;gene_synonym=ECK4382;gene_synonym=JW5800;gene_synonym=nadI;gene_synonym=pnuA;db_xref=EcoGene:EG11335 EMBL CDS 4627315 4628547 . + 0 ID=.9551;gene=nadR;locus_tag=b4390;gene_synonym=ECK4382;gene_synonym=JW5800;gene_synonym=nadI;gene_synonym=pnuA;function=regulator%3B Biosynthesis of cofactors%2C carriers: Pyridine nucleotide;note=probable nadAB transcriptional regulator%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0009435 - NAD biosynthetic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=trifunctional protein: nicotinamide mononucleotide adenylyltransferase%2C ribosylnicotinamide kinase%2C transcriptional repressor;protein_id=AAC77343.2;db_xref=GI:87082440;db_xref=ASAP:ABE-0014397;db_xref=UniProtKB/Swiss-Prot:P27278;db_xref=EcoGene:EG11335 EMBL repeat_region 4628695 4628844 . + . ID=.9552;note=RIP354 (repetitive extragenic palindromic) element%3B contains 3 REP sequences and 1 IHF site EMBL gene 4628855 4630522 . - . ID=.9553;gene=ettA;locus_tag=b4391;gene_synonym=ECK4383;gene_synonym=JW4354;gene_synonym=yjjK;db_xref=EcoGene:EG12343 EMBL CDS 4628855 4630522 . - 0 ID=.9554;gene=ettA;locus_tag=b4391;gene_synonym=ECK4383;gene_synonym=JW4354;gene_synonym=yjjK;function=factor%3B Proteins - translation and modification;note=putative ATP-binding component of a transport system%3B GO_component: GO:0005737 - cytoplasm;codon_start=1;transl_table=11;product=energy-dependent translational throttle A;protein_id=AAC77344.1;db_xref=GI:2367384;db_xref=ASAP:ABE-0014400;db_xref=UniProtKB/Swiss-Prot:P0A9W3;db_xref=EcoGene:EG12343 EMBL gene 4630733 4632670 . + . ID=.9555;gene=slt;locus_tag=b4392;gene_synonym=ECK4384;gene_synonym=JW4355;gene_synonym=sltY;db_xref=EcoGene:EG10950 EMBL CDS 4630733 4632670 . + 0 ID=.9556;gene=slt;locus_tag=b4392;gene_synonym=ECK4384;gene_synonym=JW4355;gene_synonym=sltY;ec_number=3.2.1.-;function=enzyme%3B Murein sacculus%2C peptidoglycan;note=soluble lytic murein transglycosylase%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0042597 - periplasmic space%3B GO_process: GO:0009252 - peptidoglycan biosynthetic process;codon_start=1;transl_table=11;product=lytic murein transglycosylase%2C soluble;protein_id=AAC77345.2;db_xref=GI:87082441;db_xref=ASAP:ABE-0014404;db_xref=UniProtKB/Swiss-Prot:P0AGC3;db_xref=EcoGene:EG10950 EMBL gene 4632760 4633086 . + . ID=.9557;gene=trpR;locus_tag=b4393;gene_synonym=ECK4385;gene_synonym=JW4356;db_xref=EcoGene:EG11029 EMBL CDS 4632760 4633086 . + 0 ID=.9558;gene=trpR;locus_tag=b4393;gene_synonym=ECK4385;gene_synonym=JW4356;function=regulator%3B Amino acid biosynthesis: Tryptophan;note=regulator for trp operon and aroH%3B trp aporepressor%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_process: GO:0000162 - tryptophan biosynthetic process%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=transcriptional repressor%2C tryptophan-binding;protein_id=AAC77346.1;db_xref=GI:1790854;db_xref=ASAP:ABE-0014408;db_xref=UniProtKB/Swiss-Prot:P0A881;db_xref=EcoGene:EG11029 EMBL repeat_region 4633091 4633230 . + . ID=.9559;note=REP355 (repetitive extragenic palindromic) element%3B contains 3 REP sequences EMBL gene 4633233 4633745 . - . ID=.9560;gene=yjjX;locus_tag=b4394;gene_synonym=ECK4386;gene_synonym=JW5801;db_xref=EcoGene:EG12600 EMBL CDS 4633233 4633745 . - 0 ID=.9561;gene=yjjX;locus_tag=b4394;gene_synonym=ECK4386;gene_synonym=JW5801;codon_start=1;transl_table=11;product=non-canonical purine NTP phosphatase%2C ITPase/XTPase;protein_id=AAC77347.2;db_xref=GI:87082442;db_xref=ASAP:ABE-0014411;db_xref=UniProtKB/Swiss-Prot:P39411;db_xref=EcoGene:EG12600 EMBL gene 4633797 4634444 . + . ID=.9562;gene=ytjC;locus_tag=b4395;gene_synonym=ECK4387;gene_synonym=gpmB;gene_synonym=JW4358;db_xref=EcoGene:EG12164 EMBL CDS 4633797 4634444 . + 0 ID=.9563;gene=ytjC;locus_tag=b4395;gene_synonym=ECK4387;gene_synonym=gpmB;gene_synonym=JW4358;function=enzyme%3B Not classified;note=phosphoglyceromutase 2%3B GO_component: GO:0005737 - cytoplasm%3B GO_process: GO:0006096 - glycolysis%3B GO_process: GO:0006094 - gluconeogenesis;codon_start=1;transl_table=11;product=phosphatase;protein_id=AAC77348.1;db_xref=GI:1790856;db_xref=ASAP:ABE-0014416;db_xref=UniProtKB/Swiss-Prot:P0A7A2;db_xref=EcoGene:EG12164 EMBL gene 4634441 4635310 . - . ID=.9564;gene=rob;locus_tag=b4396;gene_synonym=cbpB;gene_synonym=ECK4388;gene_synonym=JW4359;gene_synonym=robA;db_xref=EcoGene:EG11366 EMBL CDS 4634441 4635310 . - 0 ID=.9565;gene=rob;locus_tag=b4396;gene_synonym=cbpB;gene_synonym=ECK4388;gene_synonym=JW4359;gene_synonym=robA;function=factor%3B DNA - replication%2C repair%2C restriction/modification;experiment=N-terminus verified by Edman degradation: PMID 8449900;note=right origin-binding protein%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0006261 - DNA-dependent DNA replication%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=right oriC-binding transcriptional activator%2C AraC family;protein_id=AAC77349.1;db_xref=GI:1790857;db_xref=ASAP:ABE-0014420;db_xref=UniProtKB/Swiss-Prot:P0ACI0;db_xref=EcoGene:EG11366 EMBL gene 4635521 4635994 . + . ID=.9566;gene=creA;locus_tag=b4397;gene_synonym=ECK4389;gene_synonym=JW4360;gene_synonym=yjjD;db_xref=EcoGene:EG11217 EMBL CDS 4635521 4635994 . + 0 ID=.9567;gene=creA;locus_tag=b4397;gene_synonym=ECK4389;gene_synonym=JW4360;gene_synonym=yjjD;codon_start=1;transl_table=11;product=putative periplasmic protein;protein_id=AAC77350.1;db_xref=GI:1790859;db_xref=ASAP:ABE-0014426;db_xref=UniProtKB/Swiss-Prot:P0AE91;db_xref=EcoGene:EG11217 EMBL gene 4636007 4636696 . + . ID=.9568;gene=creB;locus_tag=b4398;gene_synonym=ECK4390;gene_synonym=JW4361;gene_synonym=ORF2;gene_synonym=yjjE;db_xref=EcoGene:EG11218 EMBL CDS 4636007 4636696 . + 0 ID=.9569;gene=creB;locus_tag=b4398;gene_synonym=ECK4390;gene_synonym=JW4361;gene_synonym=ORF2;gene_synonym=yjjE;function=regulator%3B Global regulatory functions;note=catabolic regulation response regulator%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=response regulator in two-component regulatory system with CreC;protein_id=AAC77351.1;db_xref=GI:1790860;db_xref=ASAP:ABE-0014428;db_xref=UniProtKB/Swiss-Prot:P08368;db_xref=EcoGene:EG11218 EMBL gene 4636696 4638120 . + . ID=.9570;gene=creC;locus_tag=b4399;gene_synonym=ECK4391;gene_synonym=JW4362;gene_synonym=phoM;db_xref=EcoGene:EG10730 EMBL CDS 4636696 4638120 . + 0 ID=.9571;gene=creC;locus_tag=b4399;gene_synonym=ECK4391;gene_synonym=JW4362;gene_synonym=phoM;function=enzyme%3B Global regulatory functions;note=catabolite repression sensor kinase for PhoB%3B alternative sensor for pho regulon%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane%3B GO_process: GO:0006464 - protein modification process;codon_start=1;transl_table=11;product=sensory histidine kinase in two-component regulatory system with CreB or PhoB;protein_id=AAC77352.1;db_xref=GI:1790861;db_xref=ASAP:ABE-0014430;db_xref=UniProtKB/Swiss-Prot:P08401;db_xref=EcoGene:EG10730 EMBL gene 4638178 4639530 . + . ID=.9572;gene=creD;locus_tag=b4400;gene_synonym=cet;gene_synonym=ECK4392;gene_synonym=JW4363;gene_synonym=refII;db_xref=EcoGene:EG10145 EMBL CDS 4638178 4639530 . + 0 ID=.9573;gene=creD;locus_tag=b4400;gene_synonym=cet;gene_synonym=ECK4392;gene_synonym=JW4363;gene_synonym=refII;function=putative membrane%3B Colicin-related functions;note=tolerance to colicin E2%3B GO_component: GO:0009274 - peptidoglycan-based cell wall%3B GO_component: GO:0019866 - organelle inner membrane;codon_start=1;transl_table=11;product=inner membrane protein;protein_id=AAC77353.1;db_xref=GI:1790862;db_xref=ASAP:ABE-0014432;db_xref=UniProtKB/Swiss-Prot:P08369;db_xref=EcoGene:EG10145 EMBL gene 4639590 4640306 . - . ID=.9574;gene=arcA;locus_tag=b4401;gene_synonym=cpxC;gene_synonym=dye;gene_synonym=ECK4393;gene_synonym=fexA;gene_synonym=JW4364;gene_synonym=msp;gene_synonym=seg;gene_synonym=sfrA;db_xref=EcoGene:EG10061 EMBL CDS 4639590 4640306 . - 0 ID=.9575;gene=arcA;locus_tag=b4401;gene_synonym=cpxC;gene_synonym=dye;gene_synonym=ECK4393;gene_synonym=fexA;gene_synonym=JW4364;gene_synonym=msp;gene_synonym=seg;gene_synonym=sfrA;function=regulator%3B Global regulatory functions;experiment=N-terminus verified by Edman degradation: PMID 9298646;note=negative response regulator of genes in aerobic pathways%2C (sensors%2C ArcB and CpxA)%3B GO_component: GO:0005737 - cytoplasm%3B GO_function: GO:0016564 - transcription repressor activity%3B GO_function: GO:0016563 - transcription activator activity%3B GO_process: GO:0006350 - transcription;codon_start=1;transl_table=11;product=response regulator in two-component regulatory system with ArcB or CpxA;protein_id=AAC77354.1;db_xref=GI:1790863;db_xref=ASAP:ABE-0014434;db_xref=UniProtKB/Swiss-Prot:P0A9Q1;db_xref=EcoGene:EG10061 EMBL gene 4640402 4640542 . + . ID=.9576;gene=yjjY;locus_tag=b4402;gene_synonym=ECK4394;gene_synonym=JW4365;db_xref=EcoGene:EG12601 EMBL CDS 4640402 4640542 . + 0 ID=.9577;gene=yjjY;locus_tag=b4402;gene_synonym=ECK4394;gene_synonym=JW4365;codon_start=1;transl_table=11;product=uncharacterized protein;protein_id=AAC77355.1;db_xref=GI:1790864;db_xref=ASAP:ABE-0014437;db_xref=UniProtKB/Swiss-Prot:P0ADD9;db_xref=EcoGene:EG12601 EMBL gene 4640942 4641628 . + . ID=.9578;gene=yjtD;locus_tag=b4403;gene_synonym=ECK4395;gene_synonym=JW4366;gene_synonym=lasT;db_xref=EcoGene:EG12309 EMBL CDS 4640942 4641628 . + 0 ID=.9579;gene=yjtD;locus_tag=b4403;gene_synonym=ECK4395;gene_synonym=JW4366;gene_synonym=lasT;note=GO_process: GO:0009451 - RNA modification;codon_start=1;transl_table=11;product=putative methyltransferase;protein_id=AAC77356.1;db_xref=GI:1790865;db_xref=ASAP:ABE-0014442;db_xref=UniProtKB/Swiss-Prot:P37005;db_xref=EcoGene:EG12309