########################################
# Program: needle
# Rundate: Sat Apr 07 2007 13:16:35
# Commandline: needle
#    [-asequence] pro.fasta
#    [-bsequence] inv_pdb.fasta
#    -outfile inv_pro_2.needle
# Align_format: srspair
# Report_file: inv_pro_2.needle
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: Q6L372_9POAL
# 2: SEQUENCE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 234
# Identity:     178/234 (76.1%)
# Similarity:   201/234 (85.9%)
# Gaps:          19/234 ( 8.1%)
# Score: 986.0
# 
#
#=======================================

Q6L372_9POAL       1 MSMKFSYTVLGGGVGLVTYLNKVYDWFEERLEIQAIADDITSKYVPPHVN     50
                                        :..|||||:|||||||:|||:||||||||||
SEQUENCE           1 -------------------MANVYDWFQERLEIQALADDVTSKYVPPHVN     31

Q6L372_9POAL      51 IFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFSSVQYIMTEANFGWL    100
                     ||||||||||||||:|.||||||||||:||||||::||||||.|.:||||
SEQUENCE          32 IFYCLGGITLTCFLIQFATGFAMTFYYKPTVTEAYASVQYIMNEVSFGWL     81

Q6L372_9POAL     101 IRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASF    150
                     |||:|||||||||||||||||||||||||||||||||::||:|||:|.||
SEQUENCE          82 IRSIHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWISGVILAVITVSF    131

Q6L372_9POAL     151 GVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLT    200
                     |||||||||||:||||||||:||||||||:|..:.:||||.:||||:|||
SEQUENCE         132 GVTGYSLPWDQVGYWAVKIVSGVPEAIPVVGVLISDLLRGGSSVGQATLT    181

Q6L372_9POAL     201 RFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL    234
                     |:||.||||||.|.|||||:||.|||||||||||
SEQUENCE         182 RYYSAHTFVLPWLIAVFMLLHFLMIRKQGISGPL    215


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