########################################
# Program: needle
# Rundate: Thu Sep 28 2006 18:03:25
# Commandline: needle
# [-asequence] glmu_gene1.fasta
# [-bsequence] glmu_gene2.fasta
# [-outfile] gene1-gene2.needle
# -auto
# Align_format: srspair
# Report_file: gene1-gene2.needle
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: L10328
# 2: X01631
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1371
# Identity: 832/1371 (60.7%)
# Similarity: 834/1371 (60.8%)
# Gaps: 537/1371 (39.2%)
# Score: 4162.0
#
#
#=======================================
L10328 0 -------------------------------------------------- 0
X01631 1 atgttgaataatgctatgagcgtagtgatccttgccgcaggcaaaggcac 50
L10328 0 -------------------------------------------------- 0
X01631 51 gcgcatgtattccgatcttccgaaagtgctgcatacccttgccgggaaag 100
L10328 0 -------------------------------------------------- 0
X01631 101 cgatggttcagcatgtcattgatgctgcgaatgaattaggcgcagcgcac 150
L10328 0 -------------------------------------------------- 0
X01631 151 gttcacctggtgtacggtcacggcggcgatctgctaaaacaggcgctgaa 200
L10328 0 -------------------------------------------------- 0
X01631 201 agacgacaaccttaactgggtgcttcaggcagagcagctgggtacgggtc 250
L10328 0 -------------------------------------------------- 0
X01631 251 atgcaatgcagcaggccgcacctttctttgccgatgatgaagacatttta 300
L10328 0 -------------------------------------------------- 0
X01631 301 atgctctacggcgacgtgccgctgatctctgtcgaaacactccagcgtct 350
L10328 0 -------------------------------------------------- 0
X01631 351 gcgtgatgctaaaccgcagggtggcattggtctgctgacggtgaaactgg 400
L10328 0 -------------------------------------------------- 0
X01631 401 atgatccgaccggttatggacgtatcacccgtgaaaacggcaaagttacc 450
L10328 0 -------------------------------------------------- 0
X01631 451 ggcattgttgagcacaaagatgccaccgacgagcagcgtcagattcagga 500
L10328 1 -------------------------------------atgaaacgctggc 13
|||||||||||||
X01631 501 gatcaacaccggcattctgattgccaacggcgcagatatgaaacgctggc 550
L10328 14 tggcgaasstgaccaacaataatgctcagggcgaatactacatcaccgac 63
|||||||..|||||||||||||||||||||||||||||||||||||||||
X01631 551 tggcgaacgtgaccaacaataatgctcagggcgaatactacatcaccgac 600
L10328 64 attattgcgctggcgtatcaggaagggcgtgaaatcgtcgccgttcatcc 113
||||||||||||||||||||||||||||||||||||||||||||||||||
X01631 601 attattgcgctggcgtatcaggaagggcgtgaaatcgtcgccgttcatcc 650
L10328 114 gcaacgtttaagcgaagtagaaggcgtgaataaccgcctgcaactctccc 163
||||||||||||||||||||||||||||||||||||||||||||||||||
X01631 651 gcaacgtttaagcgaagtagaaggcgtgaataaccgcctgcaactctccc 700
L10328 164 gtctggagcgtgtttatcagtccgaacaggctgaaaaactgctgttagca 213
||||||||||||||||||||||||||||||||||||||||||||||||||
X01631 701 gtctggagcgtgtttatcagtccgaacaggctgaaaaactgctgttagca 750
L10328 214 ggcgttatgctgcgcgatccagcgcgttttgatctgcgtggtacgctaac 263
||||||||||||||||||||||||||||||||||||||||||||||||||
X01631 751 ggcgttatgctgcgcgatccagcgcgttttgatctgcgtggtacgctaac 800
L10328 264 tcacgggcgcgatgttgaaattgatactaacgttatcatcgagggcaacg 313
||||||||||||||||||||||||||||||||||||||||||||||||||
X01631 801 tcacgggcgcgatgttgaaattgatactaacgttatcatcgagggcaacg 850
L10328 314 tgactctcggtcatcgcgtgaaaattggcaccggttgcgtgattaaaaac 363
||||||||||||||||||||||||||||||||||||||||||||||||||
X01631 851 tgactctcggtcatcgcgtgaaaattggcaccggttgcgtgattaaaaac 900
L10328 364 agcgtgattggcgatgattgcgaaatcagtccgtataccgttgtggaaga 413
||||||||||||||||||||||||||||||||||||||||||||||||||
X01631 901 agcgtgattggcgatgattgcgaaatcagtccgtataccgttgtggaaga 950
L10328 414 tgcgaatctggcagcggcctgtaccattggcccgtttgcccgtttgcgtc 463
||||||||||||||||||||||||||||||||||||||||||||||||||
X01631 951 tgcgaatctggcagcggcctgtaccattggcccgtttgcccgtttgcgtc 1000
L10328 464 ctggtgctgagttgctggaaggtgctcacgtcggtaacttcgttgagatg 513
||||||||||||||||||||||||||||||||||||||||||||||||||
X01631 1001 ctggtgctgagttgctggaaggtgctcacgtcggtaacttcgttgagatg 1050
L10328 514 aaaaaagcgcgtctgggtaaaggctcgaaagctggtcatctgacttacct 563
||||||||||||||||||||||||||||||||||||||||||||||||||
X01631 1051 aaaaaagcgcgtctgggtaaaggctcgaaagctggtcatctgacttacct 1100
L10328 564 gggcgatgcggaaattggcgataacgttaacatcggcgcgggaaccatta 613
||||||||||||||||||||||||||||||||||||||||||||||||||
X01631 1101 gggcgatgcggaaattggcgataacgttaacatcggcgcgggaaccatta 1150
L10328 614 cctgcaactacgatggtgcgaataaatttaagaccattatcggcgacgat 663
||||||||||||||||||||||||||||||||||||||||||||||||||
X01631 1151 cctgcaactacgatggtgcgaataaatttaagaccattatcggcgacgat 1200
L10328 664 gtgtttgttggttccgacactcagctggtggccccggtaacagtaggcaa 713
||||||||||||||||||||||||||||||||||||||||||||||||||
X01631 1201 gtgtttgttggttccgacactcagctggtggccccggtaacagtaggcaa 1250
L10328 714 aggcgcgaccattgctgcgggtacaactgtgacgcgtaatgtcggcgaaa 763
||||||||||||||||||||||||||||||||||||||||||||||||||
X01631 1251 aggcgcgaccattgctgcgggtacaactgtgacgcgtaatgtcggcgaaa 1300
L10328 764 atgcattagctatcagccgtgtgccgcagactcagaaagaaggctggcgt 813
||||||||||||||||||||||||||||||||||||||||||||||||||
X01631 1301 atgcattagctatcagccgtgtgccgcagactcagaaagaaggctggcgt 1350
L10328 814 cgtccggtaaagaaaaagtga 834
|||||||||||||||||||||
X01631 1351 cgtccggtaaagaaaaagtga 1371
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