RID: 0CCYY4TK013 Job Title:Protein Sequence Program: BLASTP Database: swissprot Non-redundant UniProtKB/SwissProt sequences Query #1: Query ID: lcl|Query_9434048 Length: 353 Sequences producing significant alignments: Scientific Common Max Total Query E Per. Acc. Description Name Name Taxid Score Score cover Value Ident Len Accession RecName: Full=Type IV secretion system protein VirB11 [Brucell... Brucella sui... NA 204722 228 228 98% 4e-71 37.64 361 Q8FXK7.1 RecName: Full=Type IV secretion system protein VirB11 [Brucell... Brucella abo... NA 262698 227 227 98% 2e-70 37.36 362 P0C534.1 RecName: Full=Type IV secretion system protein VirB11 [Brucell... Brucella mel... NA 224914 227 227 98% 2e-70 37.36 362 Q8YDY9.2 RecName: Full=Type IV secretion system protein VirB11... Bartonella q... NA 283165 223 223 92% 3e-69 39.70 356 Q6FYW0.1 RecName: Full=Type IV secretion system protein VirB11... Bartonella h... NA 283166 223 223 92% 4e-69 39.40 356 Q9RNC7.1 RecName: Full=Protein VirB11 [Agrobacterium tumefaciens] Agrobacteriu... NA 358 177 177 92% 1e-51 33.64 343 P0A3F8.1 RecName: Full=Protein VirB11 [Agrobacterium fabrum str. C58] Agrobacteriu... NA 176299 176 176 92% 7e-51 32.73 344 P07169.3 RecName: Full=Type IV secretion system protein PtlH homolog... Bordetella b... NA 257310 161 161 89% 1e-45 34.27 339 Q7WDT5.1 RecName: Full=Type IV secretion system protein PtlH; AltName:... Bordetella p... NA 257313 161 161 89% 2e-45 34.27 339 Q7VSX3.1 RecName: Full=Conjugal transfer protein TrbB [Agrobacterium... Agrobacteriu... NA 358 87.8 87.8 45% 2e-18 32.72 323 P54907.1 RecName: Full=Putative conjugal transfer protein MT3759... Mycobacteriu... NA 83331 86.7 86.7 47% 9e-18 30.46 352 P9WMT2.1 RecName: Full=Probable conjugal transfer protein TrbB... Sinorhizobiu... NA 394 79.7 79.7 47% 2e-15 31.55 325 P55395.1 RecName: Full=Uncharacterized protein MJ0781; Contains: RecNam... Methanocaldo... NA 243232 73.9 73.9 29% 4e-13 41.51 721 Q58191.1 RecName: Full=Uncharacterized protein MJ1287 [Methanocaldococc... Methanocaldo... NA 243232 65.1 65.1 34% 8e-11 32.03 270 Q58683.1 RecName: Full=Holliday junction branch migration ATPase PINA;... Saccharolobu... NA 930945 50.8 50.8 48% 1e-05 25.73 505 F0NID4.1 Alignments: >RecName: Full=Type IV secretion system protein VirB11 [Brucella suis 1330] Sequence ID: Q8FXK7.1 Length: 361 Range 1: 2 to 347 Score:228 bits(582), Expect:4e-71, Method:Compositional matrix adjust., Identities:137/364(38%), Positives:209/364(57%), Gaps:37/364(10%) Query 1 MSTVSSHVNP----IQKDQAVSQLLQPLDRFLEDPKITELSICRPCEIWTKSFDGWQVHS 56 MS S + P +++ +V+ L+PL +L+DP+ITE+ + RP E++ + W+ ++ Sbjct 2 MSNRSDFIVPDEAAVKRAASVNFHLEPLRPWLDDPQITEVCVNRPGEVFCERASAWEYYA 61 Query 57 VPELTTGFLQTLITAIIVY---NGMAPRSINYVLLPGGQRGTIIQTPAVIDGAISFVIRK 113 VP L L +L TA + + R + +LP G+R I++ PA G IS IRK Sbjct 62 VPNLDYEHLISLGTATARFVDQDISDSRPVLSAILPMGERIQIVRPPACEHGTISVTIRK 121 Query 114 HSLIVKTLEELKEEGTFDDCSDVSFNKPSAKEANNLLSKQDFTRLEPFEVQLLQRKREGK 173 S +TLE+ ++G F +P +K L PFE +LL K G Sbjct 122 PSFTRRTLEDYAQQGFFKHV------RPMSKS------------LTPFEQELLALKEAGD 163 Query 174 ILEFLEECVLHKRNIIIAGKTGSGKTTFARSLIEKVPVEERIITIEDVHELFLPNHPNHV 233 + FL V +R I++AG+TGSGKTT ++L++++P ++R+ITIEDV ELFLP+HPNHV Sbjct 164 YMSFLRRAVQLERVIVVAGETGSGKTTLMKALMQEIPFDQRLITIEDVPELFLPDHPNHV 223 Query 234 NMIYGNNV-----GRVSAEECLDACMRQSPDRIFLAELRGNEAWEYLNSLNTGHPGSITT 288 ++ Y + V+A L +C+R P RI LAELRG EA++++N +GH GSIT+ Sbjct 224 HLFYPSEAKEEENAPVTAATLLRSCLRMKPTRILLAELRGGEAYDFINVAASGHGGSITS 283 Query 289 THANSALQTFERCATLIKRSEVGRQLEIEMIKIVLYTTVDVILFFK-------DRKLSEI 341 HA S TFER A ++ ++ GRQL E+I+ +LY VDV++ R +SE+ Sbjct 284 CHAGSCELTFERLALMVLQNRQGRQLPYEIIRRLLYLVVDVVVHVHNGVHDGTGRHISEV 343 Query 342 FYDP 345 +YDP Sbjct 344 WYDP 347 >RecName: Full=Type IV secretion system protein VirB11 [Brucella abortus bv. 1 str. 9-941] Sequence ID: P0C534.1 Length: 362 >RecName: Full=Type IV secretion system protein VirB11 [Brucella abortus 2308] Sequence ID: Q2YJ82.1 Length: 362 Range 1: 2 to 347 Score:227 bits(578), Expect:2e-70, Method:Compositional matrix adjust., Identities:136/364(37%), Positives:208/364(57%), Gaps:37/364(10%) Query 1 MSTVSSHVNP----IQKDQAVSQLLQPLDRFLEDPKITELSICRPCEIWTKSFDGWQVHS 56 MS S + P +++ +V+ L+PL +L+DP+ITE+ + RP E++ + W+ ++ Sbjct 2 MSNRSDFIVPDEAAVKRAASVNFHLEPLRPWLDDPQITEVCVNRPGEVFCERASAWEYYA 61 Query 57 VPELTTGFLQTLITAIIVY---NGMAPRSINYVLLPGGQRGTIIQTPAVIDGAISFVIRK 113 VP L L +L TA + + R + +LP G+R I++ PA G IS IRK Sbjct 62 VPNLDYEHLISLGTATARFVDQDISDSRPVLSAILPMGERIQIVRPPACEHGTISVTIRK 121 Query 114 HSLIVKTLEELKEEGTFDDCSDVSFNKPSAKEANNLLSKQDFTRLEPFEVQLLQRKREGK 173 S +TLE+ ++G F +P +K L PFE +LL K G Sbjct 122 PSFTRRTLEDYAQQGFFKHV------RPMSKS------------LTPFEQELLALKEAGD 163 Query 174 ILEFLEECVLHKRNIIIAGKTGSGKTTFARSLIEKVPVEERIITIEDVHELFLPNHPNHV 233 + FL V +R I++AG+TGSGKTT ++L++++P ++R+ITIEDV ELFLP+HPNHV Sbjct 164 YMSFLRRAVQLERVIVVAGETGSGKTTLMKALMQEIPFDQRLITIEDVPELFLPDHPNHV 223 Query 234 NMIYGNNV-----GRVSAEECLDACMRQSPDRIFLAELRGNEAWEYLNSLNTGHPGSITT 288 ++ Y + V+A L +C+R P RI LAELRG E ++++N +GH GSIT+ Sbjct 224 HLFYPSEAKEEENAPVTAATLLRSCLRMKPTRILLAELRGGETYDFINVAASGHGGSITS 283 Query 289 THANSALQTFERCATLIKRSEVGRQLEIEMIKIVLYTTVDVILFFK-------DRKLSEI 341 HA S TFER A ++ ++ GRQL E+I+ +LY VDV++ R +SE+ Sbjct 284 CHAGSCELTFERLALMVLQNRQGRQLPYEIIRRLLYLVVDVVVHVHNGVHDGTGRHISEV 343 Query 342 FYDP 345 +YDP Sbjct 344 WYDP 347 >RecName: Full=Type IV secretion system protein VirB11 [Brucella melitensis bv. 1 str. 16M] Sequence ID: Q8YDY9.2 Length: 362 Range 1: 2 to 347 Score:227 bits(578), Expect:2e-70, Method:Compositional matrix adjust., Identities:136/364(37%), Positives:208/364(57%), Gaps:37/364(10%) Query 1 MSTVSSHVNP----IQKDQAVSQLLQPLDRFLEDPKITELSICRPCEIWTKSFDGWQVHS 56 MS S + P +++ +V+ L+PL +L+DP+ITE+ + RP E++ + W+ ++ Sbjct 2 MSNRSDFIVPDEAAVKRAASVNFHLEPLRPWLDDPQITEVCVNRPGEVFCERASAWEYYA 61 Query 57 VPELTTGFLQTLITAIIVY---NGMAPRSINYVLLPGGQRGTIIQTPAVIDGAISFVIRK 113 VP L L +L TA + + R + +LP G+R I++ PA G IS IRK Sbjct 62 VPNLDYEHLISLGTATARFVDQDISDSRPVLSAILPMGERIQIVRPPACEHGTISVTIRK 121 Query 114 HSLIVKTLEELKEEGTFDDCSDVSFNKPSAKEANNLLSKQDFTRLEPFEVQLLQRKREGK 173 S +TLE+ ++G F +P +K L PFE +LL K G Sbjct 122 PSFTRRTLEDYAQQGFFKHV------RPMSKS------------LTPFEQELLALKEAGD 163 Query 174 ILEFLEECVLHKRNIIIAGKTGSGKTTFARSLIEKVPVEERIITIEDVHELFLPNHPNHV 233 + FL V +R I++AG+TGSGKTT ++L++++P ++R+ITIEDV ELFLP+HPNHV Sbjct 164 YMSFLRRAVQLERVIVVAGETGSGKTTLMKALMQEIPFDQRLITIEDVPELFLPDHPNHV 223 Query 234 NMIYGNNV-----GRVSAEECLDACMRQSPDRIFLAELRGNEAWEYLNSLNTGHPGSITT 288 ++ Y + V+A L +C+R P RI LAELRG E ++++N +GH GSIT+ Sbjct 224 HLFYPSEAKEEENAPVTAATLLRSCLRMKPTRILLAELRGGETYDFINVAASGHGGSITS 283 Query 289 THANSALQTFERCATLIKRSEVGRQLEIEMIKIVLYTTVDVILFFK-------DRKLSEI 341 HA S TFER A ++ ++ GRQL E+I+ +LY VDV++ R +SE+ Sbjct 284 CHAGSCELTFERLALMVLQNRQGRQLPYEIIRRLLYLVVDVVVHVHNGVHDGTGRHISEV 343 Query 342 FYDP 345 +YDP Sbjct 344 WYDP 347 >RecName: Full=Type IV secretion system protein VirB11 [Bartonella quintana str. Toulouse] Sequence ID: Q6FYW0.1 Length: 356 Range 1: 20 to 346 Score:223 bits(569), Expect:3e-69, Method:Compositional matrix adjust., Identities:133/335(40%), Positives:192/335(57%), Gaps:18/335(5%) Query 21 LQPLDRFLEDPKITELSICRPCEIWTKSFDGWQVHSVPELTTGFLQTLITAIIVYNGMAP 80 L+P+ FL+D + E+ I RP ++ T+ +GW+ P L+ L + + Y+ Sbjct 20 LEPISAFLKDKSLFEIVINRPYQVMTEGIEGWKTIEAPALSFDELMGIAKVVASYSKQKI 79 Query 81 RSINYVL---LPGGQRGTIIQTPAVIDGAISFVIRKHSLIVKTLEELKEEGTFDDCSDVS 137 N +L LPG +R I+ PAV IS IRK S +LEEL +G F C VS Sbjct 80 SDKNPILSATLPGNERIQIVIPPAVEKDTISMTIRKPSSRNFSLEELANKGLFSVCEQVS 139 Query 138 FNKPSAKEANNLLSKQDFTRLEPFEVQLLQRKREGKILEFLEECVLHKRNIIIAGKTGSG 197 F N+ S+ F+ L+ E L + FL + V ++NI+IAGKTGSG Sbjct 140 FTP-----LNDYQSR--FSELKHIEHSLATAYSNKDFVSFLNQAVKCQKNILIAGKTGSG 192 Query 198 KTTFARSLIEKVPVEERIITIEDVHELFLPNHPNHVNMIY---GNNVGRVSAEECLDACM 254 KTT +++LI K+P ERIITIED EL +P PN+V+MIY G + V +E L++ + Sbjct 193 KTTLSKALIAKIPDNERIITIEDTPELVVP-QPNYVSMIYSKDGQGLASVGPKELLESAL 251 Query 255 RQSPDRIFLAELRGNEAWEYLNSLNTGHPGSITTTHANSALQTFERCATLIKRSEVGRQL 314 R PDRI L ELR A+ Y+ ++N+GHPGSITT HA++AL FE+ L+K SE G L Sbjct 252 RMRPDRILLQELRDGTAFYYIRNINSGHPGSITTVHASTALAAFEQMTLLVKESEGGGDL 311 Query 315 EIEMIKIVLYTTVDVILFFK----DRKLSEIFYDP 345 E + I+ +L + +D+I+ K K++EI+YDP Sbjct 312 ERDDIRGLLISMIDIIVQCKRVEGKFKVTEIYYDP 346 >RecName: Full=Type IV secretion system protein VirB11 [Bartonella henselae str. Houston-1] Sequence ID: Q9RNC7.1 Length: 356 Range 1: 20 to 346 Score:223 bits(568), Expect:4e-69, Method:Compositional matrix adjust., Identities:132/335(39%), Positives:195/335(58%), Gaps:18/335(5%) Query 21 LQPLDRFLEDPKITELSICRPCEIWTKSFDGWQVHSVPELTTGFLQTLITAIIVYNGMAP 80 L+P+ FL+D + E+ I RP ++ T+ +GW+ P L+ L + + Y+ Sbjct 20 LEPISTFLKDENLFEIVINRPYQVMTEGVEGWKTIETPALSFNELMGIAKVVASYSKQNI 79 Query 81 RSINYVL---LPGGQRGTIIQTPAVIDGAISFVIRKHSLIVKTLEELKEEGTFDDCSDVS 137 N +L LPG +R I+ PAV IS IRK S +LE+L +G F C VS Sbjct 80 SEKNPILSATLPGNERIQIVIPPAVEKNTISMTIRKPSSRSFSLEDLANKGLFSVCEQVS 139 Query 138 FNKPSAKEANNLLSKQDFTRLEPFEVQLLQRKREGKILEFLEECVLHKRNIIIAGKTGSG 197 F NN LS + L+ + L++ + + FL + V ++NI+IAGKTGSG Sbjct 140 FTP-----LNNYLSH--LSELKHIDHDLVRAYAKKDFVFFLNQAVQCQKNILIAGKTGSG 192 Query 198 KTTFARSLIEKVPVEERIITIEDVHELFLPNHPNHVNMIY---GNNVGRVSAEECLDACM 254 KTT +++LI K+P +ERIITIED EL +P PN+V+MIY G + V +E L++ + Sbjct 193 KTTLSKALIAKIPDDERIITIEDTPELVVP-QPNYVSMIYSKDGQGLASVGPKELLESAL 251 Query 255 RQSPDRIFLAELRGNEAWEYLNSLNTGHPGSITTTHANSALQTFERCATLIKRSEVGRQL 314 R PDRI L ELR A+ Y+ ++N+GHPGSITT HA++AL FE+ L+K SE G L Sbjct 252 RMRPDRILLQELRDGTAFYYIRNVNSGHPGSITTVHASTALAAFEQMTLLVKESEGGGDL 311 Query 315 EIEMIKIVLYTTVDVILFFK----DRKLSEIFYDP 345 E + I+ +L + +D+I+ K K++EI+YDP Sbjct 312 ERDDIRGLLISMIDIIIQCKRIEGKFKVTEIYYDP 346 >RecName: Full=Protein VirB11 [Agrobacterium tumefaciens] Sequence ID: P0A3F8.1 Length: 343 >RecName: Full=Protein VirB11 [Agrobacterium tumefaciens (strain 15955)] Sequence ID: P0A3F9.1 Length: 343 Range 1: 1 to 313 Score:177 bits(450), Expect:1e-51, Method:Compositional matrix adjust., Identities:111/330(34%), Positives:179/330(54%), Gaps:23/330(6%) Query 11 IQKDQAVSQLLQPLDRFLEDPKITELSICRPCEIWTKSFDGWQVHSVPELTTGFLQ--TL 68 ++ D + LL+P+ +L+DPK E++I RP E + + + +P ++ L+ + Sbjct 1 MEVDPQLRFLLKPILEWLDDPKTEEIAINRPGEAFVRQAGIFTKMPLP-VSYDDLEDIAI 59 Query 69 ITAIIVYNGMAPRS-INYVLLPGGQRGTIIQTPAVIDGAISFVIRKHSLIVKTLEELKEE 127 + + + PR+ + LPGG+R I P V G +S IR+ S V L+E+ Sbjct 60 LAGALRKQDVGPRNPLCATELPGGERLQICLPPTVPSGTVSLTIRRPSSRVSGLKEVS-- 117 Query 128 GTFDDCSDVSFNKPSAKEANNLLSKQDFTRLEPFEVQLLQRKREGKILEFLEECVLHKRN 187 ++ A N +++ R + +LQ G + FL CV+ + Sbjct 118 -----------SRYDASRWNQWQTRR--KRQNQDDEAILQHFDNGDLEAFLHACVVSRLT 164 Query 188 IIIAGKTGSGKTTFARSLIEKVPVEERIITIEDVHELFLPNHPNHVNMIYGNN---VGRV 244 +++ G TGSGKTT +++LI +P +ER+ITIED EL +P H NHV ++Y N +G V Sbjct 165 MLLCGPTGSGKTTMSKTLISAIPPQERLITIEDTLELVIP-HDNHVRLLYSKNGAGLGAV 223 Query 245 SAEECLDACMRQSPDRIFLAELRGNEAWEYLNSLNTGHPGSITTTHANSALQTFERCATL 304 SAE L A +R PDRI L E+R + AW YL+ + +GHPGSI+T H + +Q F++ +L Sbjct 224 SAEHLLQASLRMRPDRILLGEMRDDAAWAYLSEVVSGHPGSISTIHGANPIQGFKKLFSL 283 Query 305 IKRSEVGRQLEIEMIKIVLYTTVDVILFFK 334 +K S G LE + +L T +DVI+ F+ Sbjct 284 VKSSVQGASLEDRTLIDMLSTAIDVIIPFR 313 >RecName: Full=Protein VirB11 [Agrobacterium fabrum str. C58] Sequence ID: P07169.3 Length: 344 Range 1: 1 to 313 Score:176 bits(445), Expect:7e-51, Method:Compositional matrix adjust., Identities:108/330(33%), Positives:179/330(54%), Gaps:23/330(6%) Query 11 IQKDQAVSQLLQPLDRFLEDPKITELSICRPCEIWTKSFDGWQVHSVPELTTGFLQ--TL 68 ++ D + LL+P+ +L+DP+ E++I RP E + + + +P ++ L+ + Sbjct 1 MEVDPQLRILLKPILEWLDDPRTEEVAINRPGEAFVRQAGAFLKFPLP-VSYDDLEDIAI 59 Query 69 ITAIIVYNGMAPRS-INYVLLPGGQRGTIIQTPAVIDGAISFVIRKHSLIVKTLEELKEE 127 + + + PR+ + LP G+R I P V G +S IR+ S V +L+E+ Sbjct 60 LAGALRKQDVGPRNPLCATELPDGERLQICLPPTVPSGTVSLTIRRPSSRVSSLKEVSSR 119 Query 128 GTFDDCSDVSFNKPSAKEANNLLSKQDFTRLEPFEVQLLQRKREGKILEFLEECVLHKRN 187 ++ P + K+ R + + +L+ G + FL CV+ + Sbjct 120 ----------YDAPRWNQW-----KERKKRHDQHDEAILRYYDNGDLEAFLHACVVGRLT 164 Query 188 IIIAGKTGSGKTTFARSLIEKVPVEERIITIEDVHELFLPNHPNHVNMIYGNN---VGRV 244 +++ G TGSGKTT +++LI +P +ER+ITIED EL +P H NHV ++Y N +G V Sbjct 165 MLLCGPTGSGKTTMSKTLINAIPPQERLITIEDTLELVIP-HENHVRLLYSKNGAGLGAV 223 Query 245 SAEECLDACMRQSPDRIFLAELRGNEAWEYLNSLNTGHPGSITTTHANSALQTFERCATL 304 +AE L A +R PDRI L E+R + AW YL+ + +GHPGSI+T H + +Q F++ +L Sbjct 224 TAEHLLQASLRMRPDRILLGEIRDDAAWAYLSEVVSGHPGSISTIHGANPVQGFKKLFSL 283 Query 305 IKRSEVGRQLEIEMIKIVLYTTVDVILFFK 334 +K S G LE + +L T VDVI+ F+ Sbjct 284 VKSSAQGASLEDRTLIDMLATAVDVIVPFR 313 >RecName: Full=Type IV secretion system protein PtlH homolog [Bordetella bronchiseptica RB50] Sequence ID: Q7WDT5.1 Length: 339 Range 1: 16 to 316 Score:161 bits(408), Expect:1e-45, Method:Compositional matrix adjust., Identities:110/321(34%), Positives:162/321(50%), Gaps:27/321(8%) Query 21 LQPLDRFLEDPKITELSICRPCEIWTKSFDGWQVHSVPELTTGFLQTLITAIIVY--NGM 78 LQ L +L I E+ + RP ++W + +GW LT L L TA + + Sbjct 16 LQALHPWLSRQDIAEICVNRPGQLWYEDRNGWNRQESGALTLDHLHALATATARFCDRDI 75 Query 79 AP-RSINYVLLPGGQRGTIIQTPAVIDGAISFVIRKHSLIVKTLEELKEEGTFDDCSDVS 137 P R + LPGG+R I+ PA G +S IRK + + L EL D D+ Sbjct 76 CPERPLLAASLPGGERVQIVVPPACEPGTLSLTIRKPARRIWPLSEL-----LRDALDLP 130 Query 138 FNKPSAKEANNLLSKQDFTRLEPFEVQLLQRKREGKILEFLEECVLHKRNIIIAGKTGSG 197 P A +A R +P LL R G +FL V + I++AG+TGSG Sbjct 131 -GVPGASQA----------RPDP----LLDPWRRGAWDDFLRLAVQAGKAILVAGQTGSG 175 Query 198 KTTFARSLIEKVPVEERIITIEDVHELFLPNHPNHVNMIYGNNV-GR---VSAEECLDAC 253 KTT +L ++P ERI+TIEDV EL L NHV+++YG GR VSA E L A Sbjct 176 KTTLMNALSGEIPPRERIVTIEDVRELRLDPATNHVHLLYGTPTEGRTAAVSATELLRAA 235 Query 254 MRQSPDRIFLAELRGNEAWEYLNSLNTGHPGSITTTHANSALQTFERCATLIKRSEVGRQ 313 +R +P RI LAELRG EA+++L + +GH G I+T HA SA +R + + + Sbjct 236 LRMAPTRILLAELRGGEAFDFLQACASGHSGGISTCHAASADMALQRLTLMCMQHPNCQM 295 Query 314 LEIEMIKIVLYTTVDVILFFK 334 L ++ ++ + +D+++ + Sbjct 296 LPYSTLRALVESVIDIVVVVE 316 >RecName: Full=Type IV secretion system protein PtlH; AltName: Full=Pertussis toxin liberation protein H [Bordetella pertussis Tohama I] Sequence ID: Q7VSX3.1 Length: 339 >RecName: Full=Type IV secretion system protein PtlH homolog [Bordetella parapertussis 12822] Sequence ID: Q7W2T7.1 Length: 339 Range 1: 16 to 316 Score:161 bits(407), Expect:2e-45, Method:Compositional matrix adjust., Identities:110/321(34%), Positives:162/321(50%), Gaps:27/321(8%) Query 21 LQPLDRFLEDPKITELSICRPCEIWTKSFDGWQVHSVPELTTGFLQTLITAIIVY--NGM 78 LQ L +L I E+ + RP ++W + +GW LT L L TA + + Sbjct 16 LQALHPWLSRQDIAEICVNRPGQLWYEDRNGWNRQESGALTLDHLHALATATARFCDRDI 75 Query 79 AP-RSINYVLLPGGQRGTIIQTPAVIDGAISFVIRKHSLIVKTLEELKEEGTFDDCSDVS 137 P R + LPGG+R I+ PA G +S IRK + + L EL D D+ Sbjct 76 CPERPLLAASLPGGERVQIVVPPACEPGTLSLTIRKPARRIWPLSEL-----LRDTLDLP 130 Query 138 FNKPSAKEANNLLSKQDFTRLEPFEVQLLQRKREGKILEFLEECVLHKRNIIIAGKTGSG 197 P A +A R +P LL R G +FL V + I++AG+TGSG Sbjct 131 -GVPGASQA----------RPDP----LLDPWRRGAWDDFLRLAVQAGKAILVAGQTGSG 175 Query 198 KTTFARSLIEKVPVEERIITIEDVHELFLPNHPNHVNMIYGNNV-GR---VSAEECLDAC 253 KTT +L ++P ERI+TIEDV EL L NHV+++YG GR VSA E L A Sbjct 176 KTTLMNALSGEIPPRERIVTIEDVRELRLDPATNHVHLLYGTPTEGRTAAVSATELLRAA 235 Query 254 MRQSPDRIFLAELRGNEAWEYLNSLNTGHPGSITTTHANSALQTFERCATLIKRSEVGRQ 313 +R +P RI LAELRG EA+++L + +GH G I+T HA SA +R + + + Sbjct 236 LRMAPTRILLAELRGGEAFDFLQACASGHSGGISTCHAASADMALQRLTLMCMQHPNCQM 295 Query 314 LEIEMIKIVLYTTVDVILFFK 334 L ++ ++ + +D+++ + Sbjct 296 LPYSTLRALVESVIDIVVVVE 316 >RecName: Full=Conjugal transfer protein TrbB [Agrobacterium tumefaciens] Sequence ID: P54907.1 Length: 323 Range 1: 144 to 299 Score:87.8 bits(216), Expect:2e-18, Method:Compositional matrix adjust., Identities:53/162(33%), Positives:84/162(51%), Gaps:9/162(5%) Query 185 KRNIIIAGKTGSGKTTFARSLIEKVPV---EERIITIEDVHELFLPNHPNHVNMIYGNNV 241 + NI+I+G TGSGKTT A ++I ++ ++R++ +ED E+ N + + Sbjct 144 RMNIVISGGTGSGKTTLANAIIAEIVTAAPDDRLVILEDTAEIQCAAE----NAVSLHTS 199 Query 242 GRVSAEECLDACMRQSPDRIFLAELRGNEAWEYLNSLNTGHPGSITTTHANSALQTFERC 301 V L + MR PDRI + E+R A L + NTGHPG +TT H+N+AL R Sbjct 200 DTVDMARLLKSTMRLRPDRIIVGEVRDGAALTLLKAWNTGHPGGVTTIHSNTALSALRRL 259 Query 302 ATLIKRSEVGRQLEIEMIKIVLYTTVDVILFFKDRKLSEIFY 343 L +E +QL E+I + V + K R++ E+ + Sbjct 260 EQLT--AEASQQLMQEVIGEAVDLIVSIERSGKGRRVREVIH 299 >RecName: Full=Putative conjugal transfer protein MT3759 [Mycobacterium tuberculosis CDC1551] Sequence ID: P9WMT2.1 Length: 352 >RecName: Full=Putative conjugal transfer protein Rv3659c [Mycobacterium tuberculosis H37Rv] Sequence ID: P9WMT3.1 Length: 352 Range 1: 145 to 313 Score:86.7 bits(213), Expect:9e-18, Method:Compositional matrix adjust., Identities:53/174(30%), Positives:89/174(51%), Gaps:14/174(8%) Query 177 FLEECVLHKRNIIIAGKTGSGKTTFARSLIEKVPVEERIITIEDVHELFLPNHPNHVNMI 236 + + V + ++ G TG+GKTT +++ V +ERI+ +ED EL P HP+ V ++ Sbjct 145 LVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPDERIVCVEDAAELA-PRHPHLVKLV 203 Query 237 YGN----NVGRVSAEECLDACMRQSPDRIFLAELRGNEAWEYLNSLNTGHPGSITTTHAN 292 +G V+ + + +R PDRI + E+RG E + L +LNTGH G T HAN Sbjct 204 ARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGAEVVDLLAALNTGHEGGAGTVHAN 263 Query 293 SALQTFERCATL-----IKRSEVGRQLEIEMIKIVLYTTVDVILFFKDRKLSEI 341 + + R L + R+ + QL ++++L+ D R+L+EI Sbjct 264 NPGEVPARMEALGALGGLDRAALHSQLA-AAVQVLLHVARD---RAGRRRLAEI 313 >RecName: Full=Probable conjugal transfer protein TrbB [Sinorhizobium fredii NGR234] Sequence ID: P55395.1 Length: 325 Range 1: 146 to 307 Score:79.7 bits(195), Expect:2e-15, Method:Compositional matrix adjust., Identities:53/168(32%), Positives:81/168(48%), Gaps:9/168(5%) Query 187 NIIIAGKTGSGKTTFARSLIEKV---PVEERIITIEDVHELFLPNHPNHVNMIYGNNVGR 243 NIII+G T SGKTT A ++I ++ E+R++ +ED E+ N + Sbjct 146 NIIISGGTASGKTTLANAVIHEIVRSAPEDRLVILEDTAEIQCAAD----NAVLLRTSDT 201 Query 244 VSAEECLDACMRQSPDRIFLAELRGNEAWEYLNSLNTGHPGSITTTHANSALQTFERCAT 303 V L + MR PDRI + E+R A L + NTGHPG + T H+N+A R Sbjct 202 VDMARLLKSTMRLRPDRIVVGEVRDGAALTLLKAWNTGHPGGVATIHSNTATSALRRLEQ 261 Query 304 LIKRSEVGRQLEIEMIKIVLYTTVDVILFFKDRKLSEIFYDPIFAKSK 351 L +E +Q E+I V+ V + + R++ +I FA + Sbjct 262 LT--AEASQQPMHEVIGEVVDLIVSIERTPRGRRVRDIIQVERFANGR 307 >RecName: Full=Uncharacterized protein MJ0781; Contains: RecName: Full=Mja klbA intein [Methanocaldococcus jannaschii DSM 2661] Sequence ID: Q58191.1 Length: 721 Range 1: 303 to 407 Score:73.9 bits(180), Expect:4e-13, Method:Compositional matrix adjust., Identities:44/106(42%), Positives:60/106(56%), Gaps:6/106(5%) Query 187 NIIIAGKTGSGKTTFARSLIEKVPVEERIITIEDVHELFLPNHPNHVNMIY-----GNNV 241 N +IAG TGSGKTT L ERIITIED EL +P H + + M+ G Sbjct 303 NTLIAGGTGSGKTTLLNVLSLFSMYNERIITIEDTPELQIP-HKHVIKMVTRPARPGMPE 361 Query 242 GRVSAEECLDACMRQSPDRIFLAELRGNEAWEYLNSLNTGHPGSIT 287 V+ ++ + +R PDRIF+ E+RG EA L ++NTGH G++ Sbjct 362 YEVTMDDLIKNALRMRPDRIFVGEVRGKEAHSLLVAMNTGHDGALA 407 >RecName: Full=Uncharacterized protein MJ1287 [Methanocaldococcus jannaschii DSM 2661] Sequence ID: Q58683.1 Length: 270 Range 1: 14 to 136 Score:65.1 bits(157), Expect:8e-11, Method:Compositional matrix adjust., Identities:41/128(32%), Positives:67/128(52%), Gaps:12/128(9%) Query 173 KILEFLEECVLHKRNIIIAGKTGSGKTTFARSLIEKVPVEERIITIEDVHELFLPNHPNH 232 ++L +L + +K +I++AG+ +GKTT + +P + +I++IED E+ L H Sbjct 14 EMLAYLWLLIEYKNSIMVAGEVATGKTTLLNAFSLFIPPQMKIVSIEDTPEIRL----YH 69 Query 233 VNMIYGNNVGRVSAEE-------CLDACMRQSPDRIFLAELRGNEAWEYLNSLNTGHPGS 285 N I G EE L A +RQ PD + + E+RG EA ++ TGH + Sbjct 70 ENWIAGTTRSGFGGEEYEITMMDLLKAALRQRPDYLIVGEVRGEEAKILFQAITTGHL-A 128 Query 286 ITTTHANS 293 ++T HA S Sbjct 129 LSTIHAKS 136 >RecName: Full=Holliday junction branch migration ATPase PINA; Short=PIN domain-containing ATPase; Short=PINA [Saccharolobus islandicus REY15A] Sequence ID: F0NID4.1 Length: 505 Range 1: 239 to 387 Score:50.8 bits(120), Expect:1e-05, Method:Compositional matrix adjust., Identities:44/171(26%), Positives:72/171(42%), Gaps:23/171(13%) Query 173 KILEFLEECVLHKRNIIIAGKTGSGKTTFARSLIEKVPVEERII-TIEDVHELFLPNHPN 231 ++++ LEE IIIAG G GKTTFA++L E +I+ TIE ++ LP Sbjct 239 RLIKRLEE---RAEGIIIAGAPGMGKTTFAQALAEYYMRLGKIVKTIESPRDMHLPPEIT 295 Query 232 HVNMIYGNNVGRVSAEECLDACMRQSPDRIFLAELRGNEAWEYLNSLNTGHPGSITTTHA 291 Y N + E D + PD E+R +E ++ L G + HA Sbjct 296 Q----YSKNYAEIG--ELHDILLLSRPDYTVYDEMRNDEDFKLYVDLRLAGVGMVGVVHA 349 Query 292 NSALQTFERCATLIKRSEVGRQLEIEMIKIVLYTTVDVILFFKDRKLSEIF 342 S + R + R ++G + +D I+F +S+++ Sbjct 350 TSPIDAIHR---FVNRVDIG----------TIPNILDTIIFINSGNVSKVY 387