RID: 792UZHBD013 Job Title:Protein Sequence Program: BLASTP Query: unnamed protein product ID: lcl|Query_45374(amino acid) Length: 137 Database: swissprot Non-redundant UniProtKB/SwissProt sequences Sequences producing significant alignments: Scientific Common Max Total Query E Per. Acc. Description Name Name Taxid Score Score cover Value Ident Len Accession RecName: Full=DNA-binding protein H-NS; AltName:... Shigella fle... NA 623 276 276 100% 1e-96 100.00 137 P09120.3 RecName: Full=DNA-binding protein H-NS [Yersinia enterocolitica] Yersinia ent... NA 630 241 241 98% 8e-83 86.76 136 P0DOA5.1 RecName: Full=DNA-binding protein H-NS [Salmonella enterica... Salmonella e... NA 588858 230 230 100% 3e-78 94.89 137 A0A0F6B244.1 RecName: Full=DNA-binding protein H-NS; AltName:... Salmonella e... NA 295319 227 227 100% 4e-77 94.16 137 Q5PCT5.3 RecName: Full=DNA-binding protein H-NS; AltName:... Serratia mar... NA 615 217 217 98% 5e-73 85.93 135 P18955.2 RecName: Full=DNA-binding protein H-NS; AltName:... Proteus vulg... NA 585 213 213 98% 2e-71 78.52 134 P18818.2 RecName: Full=DNA-binding protein H-NS homolog [Buchnera... Buchnera aph... NA 107806 167 167 98% 2e-53 61.48 135 P57360.1 RecName: Full=DNA-binding protein H-NS, plasmid; AltName:... Salmonella e... NA 90370 140 140 98% 6e-43 61.48 134 Q9L5H8.1 RecName: Full=DNA-binding protein StpA; AltName: Full=H-NS... Escherichia ... NA 83333 135 135 98% 9e-41 57.78 134 P0ACG1.1 RecName: Full=DNA-binding protein H-NS homolog [Haemophilus... Haemophilus ... NA 71421 123 123 98% 5e-36 47.41 134 P43841.1 RecName: Full=DNA-binding protein StpA; AltName: Full=H-NS... Salmonella e... NA 99287 123 123 98% 5e-36 54.07 133 P0A1S4.1 Alignments: >RecName: Full=DNA-binding protein H-NS; AltName: Full=Pathogenesis protein KcpA [Shigella flexneri] Sequence ID: P09120.3 Length: 137 >RecName: Full=DNA-binding protein H-NS; AltName: Full=Heat-stable nucleoid-structuring protein; AltName: Full=Histone-like protein HLP-II; AltName: Full=Protein B1; AltName: Full=Protein H1 [Escherichia coli K-12] Sequence ID: P0ACF8.2 Length: 137 >RecName: Full=DNA-binding protein H-NS; AltName: Full=Histone-like protein HLP-II; AltName: Full=Protein B1; AltName: Full=Protein H1 [Escherichia coli CFT073] Sequence ID: P0ACF9.2 Length: 137 >RecName: Full=DNA-binding protein H-NS; AltName: Full=Histone-like protein HLP-II; AltName: Full=Protein B1; AltName: Full=Protein H1 [Escherichia coli O157:H7] Sequence ID: P0ACG0.2 Length: 137 Range 1: 1 to 137 Score:276 bits(707), Expect:1e-96, Method:Compositional matrix adjust., Identities:137/137(100%), Positives:137/137(100%), Gaps:0/137(0%) Query 1 MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEESAAAAEVEERTRKLQQ 60 MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEESAAAAEVEERTRKLQQ Sbjct 1 MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEESAAAAEVEERTRKLQQ 60 Query 61 YREMLIADGIDPNELLNSLAAVKSGTKAKRAQRPAKYSYVDENGETKTWTGQGRTPAVIK 120 YREMLIADGIDPNELLNSLAAVKSGTKAKRAQRPAKYSYVDENGETKTWTGQGRTPAVIK Sbjct 61 YREMLIADGIDPNELLNSLAAVKSGTKAKRAQRPAKYSYVDENGETKTWTGQGRTPAVIK 120 Query 121 KAMDEQGKSLDDFLIKQ 137 KAMDEQGKSLDDFLIKQ Sbjct 121 KAMDEQGKSLDDFLIKQ 137 >RecName: Full=DNA-binding protein H-NS [Yersinia enterocolitica] Sequence ID: P0DOA5.1 Length: 136 Range 1: 1 to 136 Score:241 bits(616), Expect:8e-83, Method:Compositional matrix adjust., Identities:118/136(87%), Positives:128/136(94%), Gaps:1/136(0%) Query 1 MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEESAAAAEVEERTRKLQQ 60 MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREE+S A AE+EERTRKLQQ Sbjct 1 MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEDSQAQAEIEERTRKLQQ 60 Query 61 YREMLIADGIDPNELLNSLAAVK-SGTKAKRAQRPAKYSYVDENGETKTWTGQGRTPAVI 119 YREMLIADGIDPNELLN++A K + TK+KRA RPAKY Y+DENGETKTWTGQGRTPAVI Sbjct 61 YREMLIADGIDPNELLNAMAVTKAAATKSKRAARPAKYKYIDENGETKTWTGQGRTPAVI 120 Query 120 KKAMDEQGKSLDDFLI 135 KKA++EQGKSLDDFL+ Sbjct 121 KKAIEEQGKSLDDFLL 136 >RecName: Full=DNA-binding protein H-NS [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] Sequence ID: A0A0F6B244.1 Length: 137 >RecName: Full=DNA-binding protein H-NS [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] Sequence ID: A0A0H3NBY9.1 Length: 137 >RecName: Full=DNA-binding protein H-NS; AltName: Full=Histone-like protein HLP-II; AltName: Full=Protein B1; AltName: Full=Protein H1 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] Sequence ID: P0A1S2.2 Length: 137 >RecName: Full=DNA-binding protein H-NS; AltName: Full=Histone-like protein HLP-II; AltName: Full=Protein B1; AltName: Full=Protein H1 [Salmonella enterica subsp. enterica serovar Typhi] Sequence ID: P0A1S3.2 Length: 137 Range 1: 1 to 137 Score:230 bits(587), Expect:3e-78, Method:Compositional matrix adjust., Identities:130/137(95%), Positives:134/137(97%), Gaps:0/137(0%) Query 1 MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEESAAAAEVEERTRKLQQ 60 MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEESAAAAEVEERTRKLQQ Sbjct 1 MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEESAAAAEVEERTRKLQQ 60 Query 61 YREMLIADGIDPNELLNSLAAVKSGTKAKRAQRPAKYSYVDENGETKTWTGQGRTPAVIK 120 YREMLIADGIDPNELLNS+AA KSGTKAKRA RPAKYSYVDENGETKTWTGQGRTPAVIK Sbjct 61 YREMLIADGIDPNELLNSMAAAKSGTKAKRAARPAKYSYVDENGETKTWTGQGRTPAVIK 120 Query 121 KAMDEQGKSLDDFLIKQ 137 KAM+EQGK L+DFLIK+ Sbjct 121 KAMEEQGKQLEDFLIKE 137 >RecName: Full=DNA-binding protein H-NS; AltName: Full=Histone-like protein HLP-II; AltName: Full=Protein B1; AltName: Full=Protein H1 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] Sequence ID: Q5PCT5.3 Length: 137 Range 1: 1 to 137 Score:227 bits(579), Expect:4e-77, Method:Compositional matrix adjust., Identities:129/137(94%), Positives:133/137(97%), Gaps:0/137(0%) Query 1 MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEESAAAAEVEERTRKLQQ 60 MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEESAAAAEVEERTRKLQQ Sbjct 1 MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEESAAAAEVEERTRKLQQ 60 Query 61 YREMLIADGIDPNELLNSLAAVKSGTKAKRAQRPAKYSYVDENGETKTWTGQGRTPAVIK 120 YREMLIADGIDPNELLNS+AA KSGTKAKRA RPAKYSYVDENGETKTWTGQGRTPAVIK Sbjct 61 YREMLIADGIDPNELLNSMAAAKSGTKAKRAARPAKYSYVDENGETKTWTGQGRTPAVIK 120 Query 121 KAMDEQGKSLDDFLIKQ 137 KAM+EQ K L+DFLIK+ Sbjct 121 KAMEEQDKQLEDFLIKE 137 >RecName: Full=DNA-binding protein H-NS; AltName: Full=Histone-like protein HLP-II [Serratia marcescens] Sequence ID: P18955.2 Length: 135 Range 1: 1 to 135 Score:217 bits(552), Expect:5e-73, Method:Compositional matrix adjust., Identities:116/135(86%), Positives:125/135(92%), Gaps:0/135(0%) Query 1 MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEESAAAAEVEERTRKLQQ 60 MSE LKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREE+S A AE+EERTRKLQQ Sbjct 1 MSERLKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEDSQAQAEIEERTRKLQQ 60 Query 61 YREMLIADGIDPNELLNSLAAVKSGTKAKRAQRPAKYSYVDENGETKTWTGQGRTPAVIK 120 YREMLIADGIDPNELL ++AA K+ KAKRA+RPAKY Y DENGE KTWTGQGRTPAVIK Sbjct 61 YREMLIADGIDPNELLQTMAANKAAGKAKRARRPAKYQYKDENGELKTWTGQGRTPAVIK 120 Query 121 KAMDEQGKSLDDFLI 135 KA++EQGKSLDDFL+ Sbjct 121 KAIEEQGKSLDDFLL 135 >RecName: Full=DNA-binding protein H-NS; AltName: Full=Histone-like protein HLP-II [Proteus vulgaris] Sequence ID: P18818.2 Length: 134 Range 1: 1 to 134 Score:213 bits(541), Expect:2e-71, Method:Compositional matrix adjust., Identities:106/135(79%), Positives:122/135(90%), Gaps:1/135(0%) Query 1 MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEESAAAAEVEERTRKLQQ 60 MSE+LKILNNIRTLRAQARE +LETLEEMLEKLEVVVNERREEE A AE+EER +KLQ+ Sbjct 1 MSESLKILNNIRTLRAQARETSLETLEEMLEKLEVVVNERREEEQAMQAEIEERQQKLQK 60 Query 61 YREMLIADGIDPNELLNSLAAVKSGTKAKRAQRPAKYSYVDENGETKTWTGQGRTPAVIK 120 YRE+LIADGIDP +LL + A K+G +AKRA RPAKYSYVD+NGETKTWTGQGRT AVIK Sbjct 61 YRELLIADGIDPTDLLEAAGASKTG-RAKRAARPAKYSYVDDNGETKTWTGQGRTLAVIK 119 Query 121 KAMDEQGKSLDDFLI 135 +A++E+GKSL+DFLI Sbjct 120 RAIEEEGKSLEDFLI 134 >RecName: Full=DNA-binding protein H-NS homolog [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] Sequence ID: P57360.1 Length: 135 Range 1: 1 to 135 Score:167 bits(423), Expect:2e-53, Method:Compositional matrix adjust., Identities:83/135(61%), Positives:108/135(80%), Gaps:0/135(0%) Query 1 MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEESAAAAEVEERTRKLQQ 60 M+E LKILNNIRTLR +REC+LE LEE+LEK +VV+NER++EE E+ +R KL++ Sbjct 1 MNEILKILNNIRTLRVHSRECSLEILEEILEKFKVVINERKKEEKKIKEEIAQRAIKLKK 60 Query 61 YREMLIADGIDPNELLNSLAAVKSGTKAKRAQRPAKYSYVDENGETKTWTGQGRTPAVIK 120 YREMLIADGI+PNELL ++KS K KR +RPAKY Y+++NG+ KTWTGQGRTP+VIK Sbjct 61 YREMLIADGINPNELLTKTNSIKSSEKRKRPKRPAKYKYINKNGDFKTWTGQGRTPSVIK 120 Query 121 KAMDEQGKSLDDFLI 135 A+ E+ K L+DFL+ Sbjct 121 NAILERKKILEDFLL 135 >RecName: Full=DNA-binding protein H-NS, plasmid; AltName: Full=Plasmid R27-encoded H-HS; Short=H-NS-R27 [Salmonella enterica subsp. enterica serovar Typhi] Sequence ID: Q9L5H8.1 Length: 134 Range 1: 1 to 134 Score:140 bits(354), Expect:6e-43, Method:Compositional matrix adjust., Identities:83/135(61%), Positives:99/135(73%), Gaps:1/135(0%) Query 1 MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEESAAAAEVEERTRKLQQ 60 MSEALK LNNIRTLRAQ RE LE LEE+LEKL VVV ERR+EES+ AE++ R K++ Sbjct 1 MSEALKSLNNIRTLRAQGRELPLEILEELLEKLSVVVEERRQEESSKEAELKARLEKIES 60 Query 61 YREMLIADGIDPNELLNSLAAVKSGTKAKRAQRPAKYSYVDENGETKTWTGQGRTPAVIK 120 R++++ DGIDP ELL+S +A K R RPAKY Y D NGETKTWTGQGRTP + Sbjct 61 LRQLMLEDGIDPEELLSSFSAKSGAPKKVREPRPAKYKYTDVNGETKTWTGQGRTPKALA 120 Query 121 KAMDEQGKSLDDFLI 135 + + E GK LDDFLI Sbjct 121 EQL-EAGKKLDDFLI 134 >RecName: Full=DNA-binding protein StpA; AltName: Full=H-NS homolog StpA [Escherichia coli K-12] Sequence ID: P0ACG1.1 Length: 134 >RecName: Full=DNA-binding protein StpA; AltName: Full=H-NS homolog StpA [Escherichia coli O157:H7] Sequence ID: P0ACG2.1 Length: 134 >RecName: Full=DNA-binding protein StpA; AltName: Full=H-NS homolog StpA [Shigella flexneri] Sequence ID: P0ACG3.1 Length: 134 Range 1: 1 to 134 Score:135 bits(340), Expect:9e-41, Method:Compositional matrix adjust., Identities:78/135(58%), Positives:93/135(68%), Gaps:1/135(0%) Query 1 MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEESAAAAEVEERTRKLQQ 60 MS L+ LNNIRTLRA ARE +++ LEEMLEK VV ERREEE E+ ER K+ Sbjct 1 MSVMLQSLNNIRTLRAMAREFSIDVLEEMLEKFRVVTKERREEEEQQQRELAERQEKIST 60 Query 61 YREMLIADGIDPNELLNSLAAVKSGTKAKRAQRPAKYSYVDENGETKTWTGQGRTPAVIK 120 + E++ ADGI+P ELL + +A KR RPAKY + D NGETKTWTGQGRTP I Sbjct 61 WLELMKADGINPEELLGNSSAAAPRAGKKRQPRPAKYKFTDVNGETKTWTGQGRTPKPIA 120 Query 121 KAMDEQGKSLDDFLI 135 +A+ E GKSLDDFLI Sbjct 121 QALAE-GKSLDDFLI 134 >RecName: Full=DNA-binding protein H-NS homolog [Haemophilus influenzae Rd KW20] Sequence ID: P43841.1 Length: 134 Range 1: 1 to 134 Score:123 bits(309), Expect:5e-36, Method:Compositional matrix adjust., Identities:64/135(47%), Positives:87/135(64%), Gaps:1/135(0%) Query 1 MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEESAAAAEVEERTRKLQQ 60 M+E ++ L N+R+LRA RE TLE E LEKL+ + E+R E+ ER +L + Sbjct 1 MNELVRGLTNLRSLRAAVRELTLEQAENALEKLQTAIEEKRANEAELIKAETERKERLAK 60 Query 61 YREMLIADGIDPNELLNSLAAVKSGTKAKRAQRPAKYSYVDENGETKTWTGQGRTPAVIK 120 Y+E++ +GI P EL +AKRA RPAKY+++DENGE KTWTGQGRTP I+ Sbjct 61 YKELMEKEGITPEELHEIFGTKTVSIRAKRAPRPAKYAFIDENGEHKTWTGQGRTPRPIQ 120 Query 121 KAMDEQGKSLDDFLI 135 A++ +GKSL DF I Sbjct 121 NALN-KGKSLSDFEI 134 >RecName: Full=DNA-binding protein StpA; AltName: Full=H-NS homolog StpA [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] Sequence ID: P0A1S4.1 Length: 133 >RecName: Full=DNA-binding protein StpA; AltName: Full=H-NS homolog StpA [Salmonella enterica subsp. enterica serovar Typhi] Sequence ID: P0A1S5.1 Length: 133 Range 1: 1 to 133 Score:123 bits(308), Expect:5e-36, Method:Compositional matrix adjust., Identities:73/135(54%), Positives:91/135(67%), Gaps:2/135(1%) Query 1 MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEESAAAAEVEERTRKLQQ 60 M+ L+ LNNIRTLRA ARE +++ LEEMLEK VV ERREEE ++ E+ K+ Sbjct 1 MNLMLQNLNNIRTLRAMAREFSIDVLEEMLEKFRVVTKERREEEELQQRQLAEKQEKINA 60 Query 61 YREMLIADGIDPNELLNSLAAVKSGTKAKRAQRPAKYSYVDENGETKTWTGQGRTPAVIK 120 + E++ ADGI+P EL +A+ K KR RPAKY + D NGE KTWTGQGRTP I Sbjct 61 FLELMKADGINPEELFAMDSAMPRSAK-KRQPRPAKYRFTDFNGEEKTWTGQGRTPKPIA 119 Query 121 KAMDEQGKSLDDFLI 135 +A+ GKSLDDFLI Sbjct 120 QAL-AAGKSLDDFLI 133