######################################## # Program: needle # Rundate: Tue Jul 11 2006 23:01:58 # Align_format: srspair # Report_file: ecoli_metja.needle ######################################## #======================================= # # Aligned_sequences: 2 # 1: TPIS_ECOLI # 2: TPIS_METJA # Matrix: EBLOSUM62 # Gap_penalty: 10.0 # Extend_penalty: 0.5 # # Length: 271 # Identity: 61/271 (22.5%) # Similarity: 96/271 (35.4%) # Gaps: 87/271 (32.1%) # Score: 143.5 # # #======================================= TPIS_ECOLI 1 PLVMGNWKLNGSRHMVHELVSNLRKELAGVA-------GCAVAIAPPEMY 43 .|::.|:| ..:|.:.|...|:|.:| |..:.:|| .: TPIS_METJA 1 MLIVINYK------TYNESIGNRGLEIAKIAEKVSEESGITIGVAP--QF 42 TPIS_ECOLI 44 IDMAKREAEGSHIMLGAQNVDLNLSGAFTGETSAAMLKDIGAQYIIIGHS 93 :|: :...|..:|.:.||::|....|:.||...|..:||.|.:..:|.|| TPIS_METJA 43 VDL-RMIVENVNIPVYAQHIDNINPGSHTGHILAEAIKDCGCKGTLINHS 91 TPIS_ECOLI 94 ERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQ 143 |:|....:.:.:|.| .|..||..: ||... TPIS_METJA 92 EKRMLLADIEAVINK----CKNLGLETI-----------------VCTNN 120 TPIS_ECOLI 144 IDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIR----- 188 |:. ::..||.....||.||...||||...:.|..:.|...:| TPIS_METJA 121 INT---SKAVAALSPDYIAVEPPELIGTGIPVSKANPEVVEGTVRAVKEI 167 TPIS_ECOLI 189 ----------------DHIAKVDANIAEQVIIQYGGSVNASNAAELFAQP 222 |..|.:|.. ||.|::. .|.|.|.|..|.. TPIS_METJA 168 NKDVKVLCGAGISKGEDVKAALDLG-AEGVLLA-SGVVKAKNVEEAI--- 212 TPIS_ECOLI 223 DIDGALVGGASLKADAFAVIV 243 TPIS_METJA 213 --------------------- 212 #--------------------------------------- #---------------------------------------