MAST - Motif Alignment and Search Tool
MAST version 4.3.0 (Release date: Sat Sep 26 01:51:56 PDT 2009)
For further information on how to interpret these results or to get
a copy of the MAST software please access http://meme.nbcr.net.
REFERENCE
If you use this program in your research, please cite:
Timothy L. Bailey and Michael Gribskov,
"Combining evidence using p-values: application to sequence homology
searches", Bioinformatics, 14(48-54), 1998.
DATABASE AND MOTIFS
DATABASE ./PF00383_seed.fasta (peptide)
Last updated on Fri Sep 13 01:57:14 2013
Database contains 59 sequences, 6363 residues
MOTIFS ./memeout/meme.txt (peptide)
MOTIF WIDTH BEST POSSIBLE MATCH
----- ----- -------------------
1 21 YTGCNVENASYGLTICAERTA
2 29 IEQAIEARKNAYCPYSHFHVGAALLTDDG
3 29 VVDDTDEPCSPCGACRQWIWEWCPDDTIW
PAIRWISE MOTIF CORRELATIONS:
MOTIF 1 2
----- ----- -----
2 0.15
3 0.18 0.09
No overly similar pairs (correlation > 0.60) found.
Random model letter frequencies (from non-redundant database):
A 0.073 C 0.018 D 0.052 E 0.062 F 0.040 G 0.069 H 0.022 I 0.056 K 0.058
L 0.092 M 0.023 N 0.046 P 0.051 Q 0.041 R 0.052 S 0.074 T 0.059 V 0.064
W 0.013 Y 0.033
SECTION I: HIGH-SCORING SEQUENCES
- Each of the following 40 sequences has E-value less than 10.
- The E-value of a sequence is the expected number of sequences
in a random database of the same size that would match the motifs as
well as the sequence does and is equal to the combined p-value of the
sequence times the number of sequences in the database.
- The combined p-value of a sequence measures the strength of the
match of the sequence to all the motifs and is calculated by
- finding the score of the single best match of each motif
to the sequence (best matches may overlap),
- calculating the sequence p-value of each score,
- forming the product of the p-values,
- taking the p-value of the product.
- The sequence p-value of a score is defined as the
probability of a random sequence of the same length containing
some match with as good or better a score.
- The score for the match of a position in a sequence to a motif
is computed by by summing the appropriate entry from each column of
the position-dependent scoring matrix that represents the motif.
- Sequences shorter than one or more of the motifs are skipped.
- The table is sorted by increasing E-value.
| Links | Sequence Name | Description | E-value | Length
|
|---|
|
| CDD_BACSU/1-105
|
| 8.4e-61
| 105
|
|
| CDD_YEAST/8-115
|
| 1.4e-48
| 108
|
|
| CDD_MYCPI/1-107
|
| 3.1e-39
| 107
|
|
| CDD_HUMAN/12-117
|
| 4e-39
| 106
|
|
| Q20628_CAEEL/9-114
|
| 5e-38
| 106
|
|
| Q22922_CAEEL/9-114
|
| 1.4e-33
| 106
|
|
| Q93143_BRUPA/2-107
|
| 1.4e-29
| 106
|
|
| CDD_SCHPO/3-107
|
| 1e-28
| 105
|
|
| CDD_MYCGE/2-107
|
| 4.6e-25
| 106
|
|
| O53367_MYCTU/3-108
|
| 2.5e-24
| 106
|
|
| CDD_MYCPN/2-108
|
| 1.4e-21
| 107
|
|
| BSR_BACCE/8-117
|
| 2.2e-11
| 110
|
|
| CDD_SHIFL/47-149
|
| 7.3e-10
| 103
|
|
| CDD_HAEIN/46-148
|
| 5.1e-09
| 103
|
|
| O65896_ARATH/22-124
|
| 7.2e-05
| 103
|
|
| RIB2_YEAST/432-543
|
| 0.072
| 112
|
|
| FCA1_CANAX/2-103
|
| 0.21
| 102
|
|
| TADA_HAEIN/8-110
|
| 0.43
| 103
|
|
| FCY1_YEAST/8-110
|
| 0.49
| 103
|
|
| GUAD_BACSU/1-102
|
| 0.62
| 102
|
|
| Q52724_RHOCO/26-124
|
| 0.65
| 99
|
|
| RIBD_CORAM/12-113
|
| 0.82
| 102
|
|
| O69719_MYCTU/1-103
|
| 0.86
| 103
|
|
| RIB2_SCHPO/255-361
|
| 1.2
| 107
|
|
| DCTD_YEAST/161-279
|
| 2.4
| 119
|
|
| TADA_SHIFL/5-106
|
| 2.7
| 102
|
|
| DCTD_CAEEL/48-162
|
| 2.8
| 115
|
|
| Q55162_SYNY3/3-106
|
| 2.9
| 104
|
|
| O59259_PYRHO/20-133
|
| 2.9
| 114
|
|
| O05791_MYCTU/18-114
|
| 3.7
| 97
|
|
| O28510_ARCFU/4-125
|
| 3.9
| 122
|
|
| DCTD_HUMAN/13-129
|
| 4.1
| 117
|
|
| RIBD_CHLTR/5-105
|
| 4.2
| 101
|
|
| O65755_CICAR/28-130
|
| 4.2
| 103
|
|
| YLXG_VIBFI/3-111
|
| 4.8
| 109
|
|
| DCTD_BPT4/1-151
|
| 6.6
| 151
|
|
| O41078_PBCV1/1-114
|
| 6.9
| 114
|
|
| DCTD_BPMD2/4-126
|
| 7.3
| 123
|
|
| O86961_THENE/1-103
|
| 8.8
| 103
|
|
| O84851_CHLTR/3-104
|
| 9.5
| 102
|
SECTION II: MOTIF DIAGRAMS
- The ordering and spacing of all non-overlapping motif occurrences
are shown for each high-scoring sequence listed in Section I.
- A motif occurrence is defined as a position in the sequence whose
match to the motif has POSITION p-value less than 0.0001.
- The POSITION p-value of a match is the probability of
a single random subsequence of the length of the motif
scoring at least as well as the observed match.
- For each sequence, all motif occurrences are shown unless there
are overlaps. In that case, a motif occurrence is shown only if its
p-value is less than the product of the p-values of the other
(lower-numbered) motif occurrences that it overlaps.
- The table also shows the E-value of each sequence.
- Spacers and motif occurences are indicated by
- Spacers and motif occurences are indicated by
- Spacers and motif occurences are indicated by
- occurrence of motif `n' with p-value less than 0.0001.
- Sequences longer than 1000 are not shown to scale and are indicated by thicker lines.
| Links | Name | Expect | Motifs
|
|---|
|
| CDD_BACSU/1-105
| 8.4e-61
|
|
|
| CDD_YEAST/8-115
| 1.4e-48
|
|
|
| CDD_MYCPI/1-107
| 3.1e-39
|
|
|
| CDD_HUMAN/12-117
| 4e-39
|
|
|
| Q20628_CAEEL/9-114
| 5e-38
|
|
|
| Q22922_CAEEL/9-114
| 1.4e-33
|
|
|
| Q93143_BRUPA/2-107
| 1.4e-29
|
|
|
| CDD_SCHPO/3-107
| 1e-28
|
|
|
| CDD_MYCGE/2-107
| 4.6e-25
|
|
|
| O53367_MYCTU/3-108
| 2.5e-24
|
|
|
| CDD_MYCPN/2-108
| 1.4e-21
|
|
|
| BSR_BACCE/8-117
| 2.2e-11
|
|
|
| CDD_SHIFL/47-149
| 7.3e-10
|
|
|
| CDD_HAEIN/46-148
| 5.1e-09
|
|
|
| O65896_ARATH/22-124
| 7.2e-05
|
|
|
| RIB2_YEAST/432-543
| 0.072
|
|
|
| FCA1_CANAX/2-103
| 0.21
|
|
|
| TADA_HAEIN/8-110
| 0.43
|
|
|
| FCY1_YEAST/8-110
| 0.49
|
|
|
| GUAD_BACSU/1-102
| 0.62
|
|
|
| Q52724_RHOCO/26-124
| 0.65
|
|
|
| RIBD_CORAM/12-113
| 0.82
|
|
|
| O69719_MYCTU/1-103
| 0.86
|
|
|
| RIB2_SCHPO/255-361
| 1.2
|
|
|
| DCTD_YEAST/161-279
| 2.4
|
|
|
| TADA_SHIFL/5-106
| 2.7
|
|
|
| DCTD_CAEEL/48-162
| 2.8
|
|
|
| Q55162_SYNY3/3-106
| 2.9
|
|
|
| O59259_PYRHO/20-133
| 2.9
|
|
|
| O05791_MYCTU/18-114
| 3.7
|
|
|
| O28510_ARCFU/4-125
| 3.9
|
|
|
| DCTD_HUMAN/13-129
| 4.1
|
|
|
| RIBD_CHLTR/5-105
| 4.2
|
|
|
| O65755_CICAR/28-130
| 4.2
|
|
|
| YLXG_VIBFI/3-111
| 4.8
|
|
|
| DCTD_BPT4/1-151
| 6.6
|
|
|
| O41078_PBCV1/1-114
| 6.9
|
|
|
| DCTD_BPMD2/4-126
| 7.3
|
|
|
| O86961_THENE/1-103
| 8.8
|
|
|
| O84851_CHLTR/3-104
| 9.5
|
|
| SCALE
|
| | |
| |
| |
| |
| |
| |
| 1 |
25 |
50 |
75 |
100 |
125 |
|
|---|
SECTION III: ANNOTATED SEQUENCES
- The positions and p-values of the non-overlapping motif occurrences
are shown above the actual sequence for each of the high-scoring
sequences from Section I.
- A motif occurrence is defined as a position in the sequence whose
match to the motif has POSITION p-value less than 0.0001 as
defined in Section II.
- For each sequence, the first line specifies the name of the sequence.
- The second (and possibly more) lines give a description of the
sequence.
- Following the description line(s) is a line giving the length,
combined p-value, and E-value of the sequence as defined in Section I.
- The next line reproduces the motif diagram from Section II.
- The entire sequence is printed on the following lines.
- Motif occurrences are indicated directly above their positions in the
sequence on lines showing
- the motif number of the occurrence,
- the position p-value of the occurrence,
- the best possible match to the motif, and
- columns whose match to the motif has a positive score (indicated
by a plus sign).
CDD_BACSU/1-105
LENGTH = 105 COMBINED P-VALUE = 1.43e-62 E-VALUE = 8.4e-61
DIAGRAM: 6-[2]-2-[1]-16-[3]-2
[2] [1] [
1.0e-27 1.0e-20 2
IEQAIEARKNAYCPYSHFHVGAALLTDDG YTGCNVENASYGLTICAERTA V
+++++++++++++++++++++++++++++ +++++++++++++++++++++ +
1 MNRQELITEALKARDMAYAPYSKFQVGAALLTKDGKVYRGCNIENAAYSMCNCAERTALFKAVSEGDTEFQMLAV
3]
.3e-25
VDDTDEPCSPCGACRQWIWEWCPDDTIW
++++++++++++++++++++++++++++
76 AADTPGPVSPCGACRQVISELCTKDVIVVL
CDD_YEAST/8-115
LENGTH = 108 COMBINED P-VALUE = 2.29e-50 E-VALUE = 1.4e-48
DIAGRAM: 7-[2]-2-[1]-18-[3]-2
[2] [1]
5.7e-20 1.2e-21
IEQAIEARKNAYCPYSHFHVGAALLTDDG YTGCNVENASYGLTICAERTA
+++++ ++++++++++++++ ++++++ +++++++++++++++++++++
1 DRQLEALKRAALKACELSYSPYSHFRVGCSILTNNDVIFTGANVENASYSNCICAERSAMIQVLMAGHRSGWKCM
[3]
8.0e-20
VVDDTDEPCSPCGACRQWIWEWCPDDTIW
+ ++++ ++++++++++++++ +++++
76 VICGDSEDQCVSPCGVCRQFINEFVVKDFPIVM
CDD_MYCPI/1-107
LENGTH = 107 COMBINED P-VALUE = 5.20e-41 E-VALUE = 3.1e-39
DIAGRAM: 7-[2]-1-[1]-18-[3]-2
[2] [1]
1.2e-17 1.5e-19
IEQAIEARKNAYCPYSHFHVGAALLTDDG YTGCNVENASYGLTICAERTA
+++ ++ ++++++++++++ + ++++ + + +++++++++++++++++++
1 MKEKDIYFQKLNELISNAYVPYSNFRVSCLLLTDGGWFAGVNIENSAYSPTICAERSAVSSMITSGFKQIFKVYI
[3]
1.1e-14
VVDDTDEPCSPCGACRQWIWEWCPDDTIW
+ + +++ +++++++++++++++++++++
76 LTDTIVKDIGTPCGVCRQVLSEFAKPETPIIT
CDD_HUMAN/12-117
LENGTH = 106 COMBINED P-VALUE = 6.79e-41 E-VALUE = 4e-39
DIAGRAM: 7-[2]-2-[1]-17-[3]-1
[2] [1]
5.8e-18 2.7e-18
IEQAIEARKNAYCPYSHFHVGAALLTDDG YTGCNVENASYGLTICAERTA
+ ++++ +++++++++++++++++++ +++++++++ +++++++++++
1 PECVQQLLVCSQEAKKSAYCPYSHFPVGAALLTQEGRIFKGCNIENACYPLGICAERTAIQKAVSEGYKDFRAIA
[3]
1.6e-15
VVDDTDEPCSPCGACRQWIWEWCPDDTIW
++++++++++++++++++++++ +
76 IASDMQDDFISPCGACRQVMREFGTNWPVYM
Q20628_CAEEL/9-114
LENGTH = 106 COMBINED P-VALUE = 8.46e-40 E-VALUE = 5e-38
DIAGRAM: 7-[2]-2-[1]-16-[3]-2
[2] [1]
3.2e-18 8.1e-17
IEQAIEARKNAYCPYSHFHVGAALLTDDG YTGCNVENASYGLTICAERTA
+ +++++ +++++++++++++++++++++ + ++++++++++ ++++++++
1 DISDVELVHLARAAMKRAHCPYSKFPVGAALLTESGEIVQGCNVENASYGGTICAERSAIVSAVSQGYTKFRAIA
[3]
1.3e-15
VVDDTDEPCSPCGACRQWIWEWCPDDTIW
++++ ++ ++++ ++++++++++ ++++
76 VVTELSEPASPCGLCRQFLVEFGDYKVVVGT
Q22922_CAEEL/9-114
LENGTH = 106 COMBINED P-VALUE = 2.32e-35 E-VALUE = 1.4e-33
DIAGRAM: 7-[2]-2-[1]-16-[3]-2
[2] [1]
1.1e-14 1.8e-17
IEQAIEARKNAYCPYSHFHVGAALLTDDG YTGCNVENASYGLTICAERTA
+++++ + +++++ ++++++++++ ++++ + +++ ++++++ ++++++++
1 TEFEQQLVDKAIGAMENAYCKYSNFKVGAALVCDDGEIIIGANHENASYGATICAERSAIVTALTKGHRKFKYIV
[3]
5.5e-14
VVDDTDEPCSPCGACRQWIWEWCPDDTIW
++++ + ++++++++++++ ++++ ++++
76 VATELEAPCSPCGVCRQVLIEFGDYKVILGS
Q93143_BRUPA/2-107
LENGTH = 106 COMBINED P-VALUE = 2.37e-31 E-VALUE = 1.4e-29
DIAGRAM: 7-[2]-2-[1]-16-[3]-2
[2] [1]
1.9e-16 3.9e-16
IEQAIEARKNAYCPYSHFHVGAALLTDDG YTGCNVENASYGLTICAERTA
+++ + ++++++++++ ++++++++++ +++ +++ ++++ ++++++++
1 SIDVDALTSAARLAMDRAYCPYSKFTVGAALLTKDGKIITGGNVESASYGGTICAERSAVTRAVAEGYREFQAVA
[3]
1.9e-09
VVDDTDEPCSPCGACRQWIWEWCPDDTIW
+ + +++++++ +++++ ++++ +++
76 VCATPAEPTAPCGLCRQFLIEFGDMKVIMIS
CDD_SCHPO/3-107
LENGTH = 105 COMBINED P-VALUE = 1.78e-30 E-VALUE = 1e-28
DIAGRAM: 7-[2]-3-[1]-15-[3]-1
[2] [1]
2.8e-12 2.3e-18
IEQAIEARKNAYCPYSHFHVGAALLTDDG YTGCNVENASYGLTICAERTA
+++ ++ + ++++++++ +++ + ++ + +++++++++++++++++++
1 KEDIEKLFQEVKKSLQYSYCPYSNFAVGACVVSDDKNTYIYGANVENASYGNCICAERVAITKAVSMGYTKFMAI
[3]
1.8e-10
VVDDTDEPCSPCGACRQWIWEWCPDDTIW
+ + ++ +++++ ++++++++++++ +
76 GVMSAKGRVTPCGICRQVIREFSKDINVYM
CDD_MYCGE/2-107
LENGTH = 106 COMBINED P-VALUE = 7.76e-27 E-VALUE = 4.6e-25
DIAGRAM: 7-[2]-1-[1]-17-[3]-2
[2] [1]
2.3e-10 1.7e-18
IEQAIEARKNAYCPYSHFHVGAALLTDDG YTGCNVENASYGLTICAERTA
+++ ++++ + +++++ + ++ ++ ++++++++++ + ++++++++
1 KVNLEWIIKQLQMIVKRAYTPFSNFKVACMIIANNQTFFGVNIENSSFPVTLCAERSAIASMVTSGHRKIDYVFV
[3]
1.6e-08
VVDDTDEPCSPCGACRQWIWEWCPDDTIW
+ +++ ++++++++ + +++ ++ +
76 YFNTKNKSNSPCGMCRQNLLEFSHQKTKLFC
O53367_MYCTU/3-108
LENGTH = 106 COMBINED P-VALUE = 4.17e-26 E-VALUE = 2.5e-24
DIAGRAM: 7-[2]-2-[1]-16-[3]-2
[2] [1]
4.6e-13 3.0e-15
IEQAIEARKNAYCPYSHFHVGAALLTDDG YTGCNVENASYGLTICAERTA
+ +++++ ++++++++ ++++ + +++ ++++++++ +++++++++
1 DVDWNMLRGNATQAAAGAYVPYSRFAVGAAALVDDGRVVTGCNVENVSYGLTLCAECAVVCALHSTGGGRLLALA
[3]
2.5e-08
VVDDTDEPCSPCGACRQWIWEWCPDDTIW
+++ ++++ +++++ + ++ ++ +
76 CVDGHGSVLMPCGRCRQVLLEHGGSELLIDH
CDD_MYCPN/2-108
LENGTH = 107 COMBINED P-VALUE = 2.35e-23 E-VALUE = 1.4e-21
DIAGRAM: 7-[2]-1-[1]-18-[3]-2
[2] [1]
4.6e-08 1.2e-17
IEQAIEARKNAYCPYSHFHVGAALLTDDG YTGCNVENASYGLTICAERTA
+ ++ +++ + +++++ + + ++ + ++++++++++ ++++++++
1 KVDLDWVHHKLQEVVNHAYTPFSKFKVACMLVANNQAFYGVNIENASYPVTLCAERSAIANMVTSIGKATIDYVF
[3]
4.1e-08
VVDDTDEPCSPCGACRQWIWEWCPDDTIW
+ + + ++++++++ +++++++++ +
76 VYFDTKTPTNSPCGMCRQNIFEFATDKTQLFC
BSR_BACCE/8-117
LENGTH = 110 COMBINED P-VALUE = 3.69e-13 E-VALUE = 2.2e-11
DIAGRAM: 5-[2]-2-[1]-24-[3]
[2] [1]
6.1e-06 1.8e-05
IEQAIEARKNAYCPYSHFHVGAALLTDDG YTGCNVENASYGLTICAERTA
+ + + + + +++++++++ + + + ++ +++++ +
1 QQDLELVEVATEKITMLYEDNKHHVGAAIRTKTGEIISAVHIEAYIGRVTVCAEAIAIGSAVSNGQKDFDTIVAV
[3]
8.5e-12
VVDDTDEPCSPCGACRQWIWEWCPDDTIW
++ + ++++++++ ++ ++++ +++
76 RHPYSDEVDRSIRVVSPCGMCRELISDYAPDCFVL
CDD_SHIFL/47-149
LENGTH = 103 COMBINED P-VALUE = 1.24e-11 E-VALUE = 7.3e-10
DIAGRAM: 7-[2]-35-[3]-3
[2] [3]
1.1e-08 6.4e
IEQAIEARKNAYCPYSHFHVGAALLTDDG VVDD
+++ ++ + + +++ +++ ++ ++ +
1 LDEDALAFALLPLAAACARTPLSNFNVGAIARGVSGTWYFGANMEFIGATMQQTVHAEQSAISHAWLSGEKALAA
-09
TDEPCSPCGACRQWIWEWCPDDTIW
++++ ++++++++++ +
76 ITVNYTPCGHCRQFMNELNSGLDLRIHL
CDD_HAEIN/46-148
LENGTH = 103 COMBINED P-VALUE = 8.61e-11 E-VALUE = 5.1e-09
DIAGRAM: 7-[2]-4-[1]-10-[3]-3
[2] [1] [3]
2.3e-07 9.3e-05 1.9e
IEQAIEARKNAYCPYSHFHVGAALLTDDG YTGCNVENASYGLTICAERTA VVDD
+ + +++ ++ +++ +++ +++ + +++ +++++ ++ +++
1 LTTLKLAMHLLPLAASYSHTAISHFNVGAIAIGEQGDFYFGANQEFANSAIQQTIHAEQSAISHAWLRNERRISD
-08
TDEPCSPCGACRQWIWEWCPDDTIW
++++ ++++++++ + +++
76 MVVNYTPCGHCRQFMNELHGAEKISIHL
O65896_ARATH/22-124
LENGTH = 103 COMBINED P-VALUE = 1.23e-06 E-VALUE = 7.2e-05
DIAGRAM: 7-[2]-67
[2]
1.4e-07
IEQAIEARKNAYCPYSHFHVGAALLTDDG
+ + + + + + +++ + ++ ++
1 VSVIQLLPSLVKPAQSYARTPISKFNVAVVGLGSSGRIFLGVNVEFPNLPLHHSIHAEQFLVTNLTLNGERHLNF
RIB2_YEAST/432-543
LENGTH = 112 COMBINED P-VALUE = 1.22e-03 E-VALUE = 0.072
DIAGRAM: 7-[2]-76
[2]
4.0e-05
IEQAIEARKNAYCPYSHFHVGAALLTDDG
++++++ + + +++++ + +
1 LEPHRRYMEMAVKEAGKCGPTKTAFSVGAVLVHGTQVLATGYSRELPGNTHAEQCALIKYSQLHPNCPTIVPMGT
FCA1_CANAX/2-103
LENGTH = 102 COMBINED P-VALUE = 3.53e-03 E-VALUE = 0.21
DIAGRAM: 7-[2]-66
[2]
7.4e-05
IEQAIEARKNAYCPYSHFHVGAALLTDDG
++++++ ++++++ + + ++
1 TFDDKKGLQVALDQAKKSYSEGGIPIGSCIISSDDTVLGQGHNERIQKHSAILHGEMSALENAGRLPGKTYKDCT
TADA_HAEIN/8-110
LENGTH = 103 COMBINED P-VALUE = 7.25e-03 E-VALUE = 0.43
DIAGRAM: 38-[1]-44
[1]
4.2e-05
YTGCNVENASYGLTICAERTA
+ + ++ +++ +
1 SEFDEKMMRYALELADKAEALGEIPVGAVLVDDARNIIGEGWNLSIVQSDPTAHAEIIALRNGAKNIQNYRLLNS
FCY1_YEAST/8-110
LENGTH = 103 COMBINED P-VALUE = 8.38e-03 E-VALUE = 0.49
DIAGRAM: 39-[1]-43
[1]
5.8e-05
YTGCNVENASYGLTICAERTA
++ + + +++ + +
1 SKWDQKGMDIAYEEAALGYKEGGVPIGGCLINNKDGSVLGRGHNMRFQKGSATLHGEISTLENCGRLEGKVYKDT
GUAD_BACSU/1-102
LENGTH = 102 COMBINED P-VALUE = 1.06e-02 E-VALUE = 0.62
DIAGRAM: 102
Q52724_RHOCO/26-124
LENGTH = 99 COMBINED P-VALUE = 1.10e-02 E-VALUE = 0.65
DIAGRAM: 37-[1]-41
[1]
5.6e-05
YTGCNVENASYGLTICAERTA
++ + ++ + + +
1 YAAETAMLAVALEEAHIGLAEGASDWRSIFTLDGELVSRGHNQRIQDNDPSSHGETDAFRNAGRHTTWRDKILVT
RIBD_CORAM/12-113
LENGTH = 102 COMBINED P-VALUE = 1.38e-02 E-VALUE = 0.82
DIAGRAM: 8-[2]-65
[2]
8.8e-05
IEQAIEARKNAYCPYSHFHVGAALLTDDG
+++ + + + ++++ ++ ++
1 APIVEQALRTAMSAGWEVRGTTSPNPPVGAVIISTSGEIVGTGATQPVGGVHAEVQALADAAGKTEGATAVVTLE
O69719_MYCTU/1-103
LENGTH = 103 COMBINED P-VALUE = 1.46e-02 E-VALUE = 0.86
DIAGRAM: 103
RIB2_SCHPO/255-361
LENGTH = 107 COMBINED P-VALUE = 2.12e-02 E-VALUE = 1.2
DIAGRAM: 107
DCTD_YEAST/161-279
LENGTH = 119 COMBINED P-VALUE = 4.04e-02 E-VALUE = 2.4
DIAGRAM: 119
TADA_SHIFL/5-106
LENGTH = 102 COMBINED P-VALUE = 4.51e-02 E-VALUE = 2.7
DIAGRAM: 102
DCTD_CAEEL/48-162
LENGTH = 115 COMBINED P-VALUE = 4.73e-02 E-VALUE = 2.8
DIAGRAM: 115
Q55162_SYNY3/3-106
LENGTH = 104 COMBINED P-VALUE = 4.84e-02 E-VALUE = 2.9
DIAGRAM: 104
O59259_PYRHO/20-133
LENGTH = 114 COMBINED P-VALUE = 4.92e-02 E-VALUE = 2.9
DIAGRAM: 114
O05791_MYCTU/18-114
LENGTH = 97 COMBINED P-VALUE = 6.23e-02 E-VALUE = 3.7
DIAGRAM: 97
O28510_ARCFU/4-125
LENGTH = 122 COMBINED P-VALUE = 6.61e-02 E-VALUE = 3.9
DIAGRAM: 122
DCTD_HUMAN/13-129
LENGTH = 117 COMBINED P-VALUE = 6.94e-02 E-VALUE = 4.1
DIAGRAM: 117
RIBD_CHLTR/5-105
LENGTH = 101 COMBINED P-VALUE = 7.06e-02 E-VALUE = 4.2
DIAGRAM: 101
O65755_CICAR/28-130
LENGTH = 103 COMBINED P-VALUE = 7.18e-02 E-VALUE = 4.2
DIAGRAM: 103
YLXG_VIBFI/3-111
LENGTH = 109 COMBINED P-VALUE = 8.22e-02 E-VALUE = 4.8
DIAGRAM: 109
DCTD_BPT4/1-151
LENGTH = 151 COMBINED P-VALUE = 1.11e-01 E-VALUE = 6.6
DIAGRAM: 151
O41078_PBCV1/1-114
LENGTH = 114 COMBINED P-VALUE = 1.16e-01 E-VALUE = 6.9
DIAGRAM: 114
DCTD_BPMD2/4-126
LENGTH = 123 COMBINED P-VALUE = 1.24e-01 E-VALUE = 7.3
DIAGRAM: 123
O86961_THENE/1-103
LENGTH = 103 COMBINED P-VALUE = 1.50e-01 E-VALUE = 8.8
DIAGRAM: 103
O84851_CHLTR/3-104
LENGTH = 102 COMBINED P-VALUE = 1.60e-01 E-VALUE = 9.5
DIAGRAM: 102
Debugging Information
CPU: kodomo.fbb.msu.ru
Time 0.008000 secs.
mast ./memeout/meme.txt -d ./PF00383_seed.fasta -ev 10.000000 -mt 0.000100
Button Help
Links to Entrez database at NCBI
Links to sequence scores (section I)
Links to motif diagrams (section II)
Links to sequence/motif annotated alignments (section III)
This information