# # Output from 'compseq' # # The Expected frequencies are calculated from the observed single # base or residue frequencies in these sequences # # The input sequences are: # JZEW01000010.1 Word size 3 Total count 2910 # # Word Obs Count Obs Frequency Exp Frequency Obs/Exp Frequency # AAA 367 0.1261168 0.0493332 2.5564272 AAC 25 0.0085911 0.0186616 0.4603597 AAG 46 0.0158076 0.0204169 0.7742375 AAT 157 0.0539519 0.0460998 1.1703284 ACA 28 0.0096220 0.0186616 0.5156028 ACC 12 0.0041237 0.0070593 0.5841554 ACG 11 0.0037801 0.0077233 0.4894394 ACT 33 0.0113402 0.0174385 0.6502972 AGA 51 0.0175258 0.0204169 0.8583937 AGC 31 0.0106529 0.0077233 1.3793292 AGG 19 0.0065292 0.0084497 0.7727143 AGT 38 0.0130584 0.0190788 0.6844483 ATA 33 0.0113402 0.0460998 0.2459926 ATC 38 0.0130584 0.0174385 0.7488271 ATG 30 0.0103093 0.0190788 0.5403539 ATT 149 0.0512027 0.0430783 1.1885982 CAA 65 0.0223368 0.0186616 1.1969351 CAC 18 0.0061856 0.0070593 0.8762331 CAG 42 0.0144330 0.0077233 1.8687686 CAT 15 0.0051546 0.0174385 0.2955896 CCA 35 0.0120275 0.0070593 1.7037865 CCC 19 0.0065292 0.0026704 2.4450662 CCG 22 0.0075601 0.0029215 2.5877291 CCT 9 0.0030928 0.0065966 0.4688462 CGA 37 0.0127148 0.0077233 1.6462961 CGC 8 0.0027491 0.0029215 0.9409924 CGG 18 0.0061856 0.0031963 1.9352083 CGT 10 0.0034364 0.0072171 0.4761535 CTA 25 0.0085911 0.0174385 0.4926494 CTC 12 0.0041237 0.0065966 0.6251282 CTG 39 0.0134021 0.0072171 1.8569985 CTT 30 0.0103093 0.0162955 0.6326448 GAA 111 0.0381443 0.0204169 1.8682687 GAC 22 0.0075601 0.0077233 0.9788788 GAG 22 0.0075601 0.0084497 0.8947218 GAT 43 0.0147766 0.0190788 0.7745073 GCA 24 0.0082474 0.0077233 1.0678678 GCC 17 0.0058419 0.0029215 1.9996088 GCG 14 0.0048110 0.0031963 1.5051620 GCT 22 0.0075601 0.0072171 1.0475376 GGA 41 0.0140893 0.0084497 1.6674361 GGC 9 0.0030928 0.0031963 0.9676042 GGG 13 0.0044674 0.0034970 1.2774905 GGT 15 0.0051546 0.0078959 0.6528258 GTA 22 0.0075601 0.0190788 0.3962595 GTC 13 0.0044674 0.0072171 0.6189995 GTG 22 0.0075601 0.0078959 0.9574778 GTT 32 0.0109966 0.0178283 0.6168048 TAA 52 0.0178694 0.0460998 0.3876247 TAC 19 0.0065292 0.0174385 0.3744136 TAG 29 0.0099656 0.0190788 0.5223421 TAT 35 0.0120275 0.0430783 0.2792009 TCA 53 0.0182131 0.0174385 1.0444168 TCC 37 0.0127148 0.0065966 1.9274786 TCG 26 0.0089347 0.0072171 1.2379990 TCT 42 0.0144330 0.0162955 0.8857027 TGA 69 0.0237113 0.0190788 1.2428140 TGC 29 0.0099656 0.0072171 1.3808450 TGG 28 0.0096220 0.0078959 1.2186081 TGT 26 0.0089347 0.0178283 0.5011539 TTA 55 0.0189003 0.0430783 0.4387443 TTC 94 0.0323024 0.0162955 1.9822870 TTG 61 0.0209622 0.0178283 1.1757842 TTT 341 0.1171821 0.0402548 2.9110112 Other 0 0.0000000 0.0000000 10000000000.0000000