SheeP homepage


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SheeP
Sheet Puzzle (ver. 2.3)
SheeP displays schemes of β-sheet called draws β-sheet maps
Older version of SheeP is available.

Outline of SheeP algorithm: 1. Protein structure in PDB format is taken as input. 2. Secondary structures are detected. 3. β-sheet maps are created. 4. Maps are modified.

Job done!
Status: maps builded
File name: alpha.pdb

Download results: XMAP (XML) Reports Maps Script Everything

Sheet sht_0, map_0 You can mark contacts or flip rows or columns

						phe 198 :D	thr 197 :D
arg 124 :D	leu 123 :D	gln 122 :D	tyr 121 :D	val 120 :D		ala 119 :D	pro 118 :D
ser 132 :D	val 133 :D	cys 134 :D	leu 135 :D	phe 136 :D		thr 137 :D	asp 138 :D
ser 177 :D	trp 176 :D	ala 175 :D	val 174 :D	ala 173 :D		ser 172 :D	asn 171 :D	ser 170 :D	lys 169 :D	phe 168 :D	asp 167 :D
val 153 :D	tyr 154 :D	ile 155 :D	thr 156 :D	asp 157 :D	lys 158 :D	thr 159 :D	val 160 :D	leu 161 :D	asp 162 :D	met 163 :D	arg 164 :D

Beta-sheets
sht_id map_ids adjust_alpha_layer_red adjust_alpha_layer_yellow
sht_0 map_0

Contact: evaksianov@gmail.com
Please, cite: Aksianov E., Alexeevski A. SheeP: A Tool for Description of β-Sheets in Protein 3D Structures. J. Bioinform. Comput. Biol. 2012. 10(2).

Work on this service is supported by Russian Foundation of Basic Research, grants 13-07-00969 and 14-04-31709_mol_a.

sht_id	map_ids	adjust_alpha_layer_red	adjust_alpha_layer_yellow
sht_0	map_0

Select contacts of sheet sht_