Database and Motifs High-scoring Motif Occurences Debugging Information


FIMO - Motif search tool

FIMO version 4.3.0, (Release date: 6 PDT 20)

For further information on how to interpret these results or to get a copy of the FIMO software please access http://meme.nbcr.net

DATABASE AND MOTIFS

DATABASE ecoli.fasta
Database contains 1 sequences, 4641652 residues

MOTIFS meme.txt (nucleotide)

MOTIF WIDTH BEST POSSIBLE MATCH
1 21 TTTAGAAGCAAACGTTTTCTT
1 21 AAGAAAACGTTTGCTTCTAAA
2 11 AGTGCTGCGGC
2 11 GCCGCAGCACT
3 10 GTTTTTCCAG
3 10 CTGGAAAAAC

Random model letter frequencies (from non-redundant database):
A 0.275 C 0.225 G 0.225 T 0.275

SECTION I: HIGH-SCORING MOTIF OCCURENCES
Motif Sequence Name Start End p-value q-value
1 NC_000913.3 2695640 2695620 1.71e-09 0.0159
1 NC_000913.3 1930823 1930843 1.22e-08 0.0568
1 NC_000913.3 1737779 1737799 3.36e-08 0.104
1 NC_000913.3 2198424 2198444 6.94e-08 0.161
1 NC_000913.3 1987488 1987508 1.06e-07 0.196
1 NC_000913.3 2634591 2634611 1.7e-07 0.262
1 NC_000913.3 4404660 4404680 1.97e-07 0.262
2 NC_000913.3 653661 653671 1.13e-07 0.316
2 NC_000913.3 882646 882656 2.07e-07 0.316
2 NC_000913.3 1473871 1473881 2.07e-07 0.316
2 NC_000913.3 2124944 2124934 2.07e-07 0.316
2 NC_000913.3 3345945 3345955 2.07e-07 0.316
1 NC_000913.3 633611 633591 3.04e-07 0.302
2 NC_000913.3 1288690 1288680 3.45e-07 0.316
2 NC_000913.3 1837000 1837010 3.45e-07 0.316
2 NC_000913.3 2776027 2776017 3.45e-07 0.316
2 NC_000913.3 3968826 3968816 3.45e-07 0.316
1 NC_000913.3 1433254 1433234 3.25e-07 0.302
1 NC_000913.3 1634042 1634062 3.25e-07 0.302
2 NC_000913.3 625300 625290 4.58e-07 0.316
2 NC_000913.3 1076505 1076515 4.58e-07 0.316
2 NC_000913.3 4319859 4319869 4.58e-07 0.316
2 NC_000913.3 4612180 4612170 4.58e-07 0.316
1 NC_000913.3 2634144 2634124 3.99e-07 0.337
1 NC_000913.3 1191807 1191787 4.56e-07 0.353
1 NC_000913.3 4017748 4017728 5.53e-07 0.365
1 NC_000913.3 3155987 3155967 5.89e-07 0.365
1 NC_000913.3 2959967 2959947 6.27e-07 0.365
1 NC_000913.3 4083226 4083246 6.67e-07 0.365
1 NC_000913.3 2430337 2430317 7.08e-07 0.365
1 NC_000913.3 2673210 2673190 7.08e-07 0.365
2 NC_000913.3 4433333 4433343 6.65e-07 0.316
1 NC_000913.3 1600498 1600478 7.99e-07 0.39
1 NC_000913.3 2224778 2224798 8.48e-07 0.394
1 NC_000913.3 3778583 3778563 1.01e-06 0.446
1 NC_000913.3 1509235 1509255 1.2e-06 0.504
2 NC_000913.3 560935 560945 7.78e-07 0.316
1 NC_000913.3 3126063 3126043 1.41e-06 0.519
2 NC_000913.3 357780 357770 1.7e-06 0.316
2 NC_000913.3 1285024 1285034 1.7e-06 0.316
2 NC_000913.3 1318888 1318878 1.7e-06 0.316
2 NC_000913.3 1453476 1453486 1.7e-06 0.316
2 NC_000913.3 1642929 1642919 1.7e-06 0.316
2 NC_000913.3 1654172 1654162 1.7e-06 0.316
2 NC_000913.3 1665780 1665790 1.7e-06 0.316
2 NC_000913.3 1911572 1911582 1.7e-06 0.316
2 NC_000913.3 2045058 2045068 1.7e-06 0.316
2 NC_000913.3 2345070 2345060 1.7e-06 0.316
2 NC_000913.3 2540477 2540487 1.7e-06 0.316
2 NC_000913.3 2595060 2595070 1.7e-06 0.316
2 NC_000913.3 2634552 2634562 1.7e-06 0.316
2 NC_000913.3 2672095 2672105 1.7e-06 0.316
2 NC_000913.3 3216831 3216841 1.7e-06 0.316
2 NC_000913.3 3590331 3590341 1.7e-06 0.316
2 NC_000913.3 3739460 3739470 1.7e-06 0.316
2 NC_000913.3 3795391 3795381 1.7e-06 0.316
2 NC_000913.3 4030813 4030803 1.7e-06 0.316
2 NC_000913.3 4429027 4429037 1.7e-06 0.316
1 NC_000913.3 4295511 4295531 1.48e-06 0.519
1 NC_000913.3 1245603 1245583 1.48e-06 0.519
2 NC_000913.3 1029582 1029572 1.84e-06 0.316
2 NC_000913.3 2911492 2911482 1.84e-06 0.316
2 NC_000913.3 3392575 3392565 1.84e-06 0.316
2 NC_000913.3 3688013 3688003 1.84e-06 0.316
2 NC_000913.3 4432671 4432681 1.84e-06 0.316
2 NC_000913.3 100382 100392 2.52e-06 0.316
2 NC_000913.3 122294 122304 2.52e-06 0.316
2 NC_000913.3 626986 626996 2.52e-06 0.316
2 NC_000913.3 803993 804003 2.52e-06 0.316
2 NC_000913.3 1514683 1514693 2.52e-06 0.316
2 NC_000913.3 1869229 1869239 2.52e-06 0.316
2 NC_000913.3 1945540 1945550 2.52e-06 0.316
2 NC_000913.3 2930620 2930630 2.52e-06 0.316
2 NC_000913.3 3436456 3436466 2.52e-06 0.316
2 NC_000913.3 4032841 4032851 2.52e-06 0.316
2 NC_000913.3 4300525 4300535 2.52e-06 0.316
2 NC_000913.3 504236 504226 2.52e-06 0.316
2 NC_000913.3 553766 553756 2.52e-06 0.316
2 NC_000913.3 554286 554276 2.52e-06 0.316
2 NC_000913.3 1192084 1192074 2.52e-06 0.316
2 NC_000913.3 1723686 1723676 2.52e-06 0.316
2 NC_000913.3 1827184 1827174 2.52e-06 0.316
2 NC_000913.3 2126542 2126532 2.52e-06 0.316
2 NC_000913.3 2223973 2223963 2.52e-06 0.316
2 NC_000913.3 2379918 2379908 2.52e-06 0.316
2 NC_000913.3 2693323 2693313 2.52e-06 0.316
2 NC_000913.3 3144377 3144367 2.52e-06 0.316
2 NC_000913.3 3258605 3258595 2.52e-06 0.316
2 NC_000913.3 3271503 3271493 2.52e-06 0.316
2 NC_000913.3 3326565 3326555 2.52e-06 0.316
2 NC_000913.3 3329465 3329455 2.52e-06 0.316
2 NC_000913.3 3414222 3414212 2.52e-06 0.316
2 NC_000913.3 3492059 3492049 2.52e-06 0.316
2 NC_000913.3 3545062 3545052 2.52e-06 0.316
2 NC_000913.3 3659326 3659316 2.52e-06 0.316
2 NC_000913.3 3847526 3847516 2.52e-06 0.316
2 NC_000913.3 4227768 4227758 2.52e-06 0.316
2 NC_000913.3 4369668 4369658 2.52e-06 0.316
2 NC_000913.3 4570527 4570517 2.52e-06 0.316
2 NC_000913.3 606111 606121 3.64e-06 0.319
2 NC_000913.3 751642 751652 3.64e-06 0.319
2 NC_000913.3 1194096 1194106 3.64e-06 0.319
2 NC_000913.3 1984831 1984841 3.64e-06 0.319
2 NC_000913.3 2278192 2278202 3.64e-06 0.319
2 NC_000913.3 2356503 2356513 3.64e-06 0.319
2 NC_000913.3 2573177 2573187 3.64e-06 0.319
2 NC_000913.3 2577779 2577789 3.64e-06 0.319
2 NC_000913.3 3606318 3606328 3.64e-06 0.319
2 NC_000913.3 3661190 3661200 3.64e-06 0.319
2 NC_000913.3 3959791 3959801 3.64e-06 0.319
2 NC_000913.3 4133910 4133920 3.64e-06 0.319
2 NC_000913.3 4430292 4430302 3.64e-06 0.319
2 NC_000913.3 124059 124049 3.64e-06 0.319
2 NC_000913.3 205840 205830 3.64e-06 0.319
2 NC_000913.3 331278 331268 3.64e-06 0.319
2 NC_000913.3 408242 408232 3.64e-06 0.319
2 NC_000913.3 633342 633332 3.64e-06 0.319
2 NC_000913.3 930240 930230 3.64e-06 0.319
2 NC_000913.3 1967152 1967142 3.64e-06 0.319
2 NC_000913.3 2329842 2329832 3.64e-06 0.319
2 NC_000913.3 2442665 2442655 3.64e-06 0.319
2 NC_000913.3 2455622 2455612 3.64e-06 0.319
2 NC_000913.3 2835217 2835207 3.64e-06 0.319
2 NC_000913.3 2938147 2938137 3.64e-06 0.319
2 NC_000913.3 3223488 3223478 3.64e-06 0.319
2 NC_000913.3 3781203 3781193 3.64e-06 0.319
2 NC_000913.3 3907848 3907838 3.64e-06 0.319
1 NC_000913.3 1208340 1208360 1.83e-06 0.519
1 NC_000913.3 623439 623419 1.83e-06 0.519
1 NC_000913.3 3060277 3060257 1.93e-06 0.519
1 NC_000913.3 777178 777158 2.02e-06 0.519
1 NC_000913.3 2614439 2614459 2.02e-06 0.519
1 NC_000913.3 2622213 2622193 2.02e-06 0.519
1 NC_000913.3 2635903 2635923 2.02e-06 0.519
2 NC_000913.3 213540 213550 4.47e-06 0.319
2 NC_000913.3 283862 283852 4.47e-06 0.319
2 NC_000913.3 347729 347719 4.47e-06 0.319
2 NC_000913.3 542650 542660 4.47e-06 0.319
2 NC_000913.3 549698 549708 4.47e-06 0.319
2 NC_000913.3 621439 621429 4.47e-06 0.319
2 NC_000913.3 658810 658800 4.47e-06 0.319
2 NC_000913.3 681768 681758 4.47e-06 0.319
2 NC_000913.3 903220 903230 4.47e-06 0.319
2 NC_000913.3 1067570 1067580 4.47e-06 0.319
2 NC_000913.3 1273029 1273039 4.47e-06 0.319
2 NC_000913.3 1361996 1361986 4.47e-06 0.319
2 NC_000913.3 1430198 1430208 4.47e-06 0.319
2 NC_000913.3 1430318 1430328 4.47e-06 0.319
2 NC_000913.3 1543126 1543116 4.47e-06 0.319
2 NC_000913.3 2053782 2053772 4.47e-06 0.319
2 NC_000913.3 2232429 2232439 4.47e-06 0.319
2 NC_000913.3 2610824 2610834 4.47e-06 0.319
2 NC_000913.3 2736183 2736173 4.47e-06 0.319
2 NC_000913.3 2933346 2933336 4.47e-06 0.319
2 NC_000913.3 3097195 3097185 4.47e-06 0.319
2 NC_000913.3 3157437 3157447 4.47e-06 0.319
2 NC_000913.3 3256420 3256410 4.47e-06 0.319
2 NC_000913.3 3295857 3295867 4.47e-06 0.319
2 NC_000913.3 3792368 3792358 4.47e-06 0.319
2 NC_000913.3 3850242 3850252 4.47e-06 0.319
2 NC_000913.3 4109747 4109757 4.47e-06 0.319
2 NC_000913.3 4284868 4284878 4.47e-06 0.319
1 NC_000913.3 4494350 4494370 2.24e-06 0.519
1 NC_000913.3 3592305 3592325 2.35e-06 0.519
1 NC_000913.3 939190 939210 2.47e-06 0.519
1 NC_000913.3 1192069 1192049 2.47e-06 0.519
1 NC_000913.3 1330805 1330825 2.47e-06 0.519
1 NC_000913.3 1554041 1554061 2.59e-06 0.519
1 NC_000913.3 1706180 1706200 2.59e-06 0.519
1 NC_000913.3 1755367 1755347 2.59e-06 0.519
1 NC_000913.3 2419478 2419498 2.71e-06 0.519
1 NC_000913.3 1986218 1986198 2.84e-06 0.519
1 NC_000913.3 2251758 2251738 2.84e-06 0.519
1 NC_000913.3 3386564 3386544 2.84e-06 0.519
2 NC_000913.3 14727 14737 5.24e-06 0.353
2 NC_000913.3 354034 354044 5.24e-06 0.353
2 NC_000913.3 1775251 1775241 5.24e-06 0.353
2 NC_000913.3 2723304 2723314 5.24e-06 0.353
2 NC_000913.3 3518332 3518322 5.24e-06 0.353
2 NC_000913.3 3925567 3925557 5.24e-06 0.353
1 NC_000913.3 1510889 1510869 3.12e-06 0.519
2 NC_000913.3 424973 424963 5.36e-06 0.353
2 NC_000913.3 2707625 2707615 5.36e-06 0.353
2 NC_000913.3 3694807 3694797 5.36e-06 0.353
2 NC_000913.3 3750814 3750804 5.36e-06 0.353
2 NC_000913.3 4460314 4460324 5.36e-06 0.353
1 NC_000913.3 554381 554401 3.27e-06 0.519
1 NC_000913.3 1722975 1722995 3.27e-06 0.519
1 NC_000913.3 2097646 2097666 3.27e-06 0.519
1 NC_000913.3 2613503 2613483 3.42e-06 0.519
1 NC_000913.3 1641899 1641879 3.58e-06 0.519
2 NC_000913.3 784351 784361 6.19e-06 0.37
2 NC_000913.3 1059075 1059085 6.19e-06 0.37
2 NC_000913.3 1861220 1861230 6.19e-06 0.37
2 NC_000913.3 1913435 1913445 6.19e-06 0.37
2 NC_000913.3 2634103 2634113 6.19e-06 0.37
2 NC_000913.3 2681544 2681554 6.19e-06 0.37
2 NC_000913.3 3270653 3270663 6.19e-06 0.37
2 NC_000913.3 3312443 3312453 6.19e-06 0.37
2 NC_000913.3 3391195 3391205 6.19e-06 0.37
2 NC_000913.3 4085752 4085762 6.19e-06 0.37
2 NC_000913.3 1876124 1876114 6.19e-06 0.37
2 NC_000913.3 2292919 2292909 6.19e-06 0.37
2 NC_000913.3 3578609 3578599 6.19e-06 0.37
2 NC_000913.3 4448643 4448633 6.19e-06 0.37
1 NC_000913.3 1143271 1143291 3.74e-06 0.519
1 NC_000913.3 2474526 2474506 3.74e-06 0.519
1 NC_000913.3 23020 23000 3.91e-06 0.519
1 NC_000913.3 2348331 2348351 3.91e-06 0.519
1 NC_000913.3 3354268 3354248 3.91e-06 0.519
1 NC_000913.3 4387423 4387443 3.91e-06 0.519
1 NC_000913.3 1581784 1581764 4.09e-06 0.519
1 NC_000913.3 1944592 1944572 4.09e-06 0.519
1 NC_000913.3 832688 832708 4.27e-06 0.519
1 NC_000913.3 3195124 3195144 4.27e-06 0.519
1 NC_000913.3 699194 699174 4.46e-06 0.519
3 NC_000913.3 65159 65168 1.11e-06 0.0978
3 NC_000913.3 183723 183732 1.11e-06 0.0978
3 NC_000913.3 278631 278640 1.11e-06 0.0978
3 NC_000913.3 319952 319961 1.11e-06 0.0978
3 NC_000913.3 438704 438713 1.11e-06 0.0978
3 NC_000913.3 453909 453918 1.11e-06 0.0978
3 NC_000913.3 490785 490794 1.11e-06 0.0978
3 NC_000913.3 660541 660550 1.11e-06 0.0978
3 NC_000913.3 668730 668739 1.11e-06 0.0978
3 NC_000913.3 828942 828951 1.11e-06 0.0978
3 NC_000913.3 899918 899927 1.11e-06 0.0978
3 NC_000913.3 996791 996800 1.11e-06 0.0978
3 NC_000913.3 1043169 1043178 1.11e-06 0.0978
3 NC_000913.3 1077724 1077733 1.11e-06 0.0978
3 NC_000913.3 1146538 1146547 1.11e-06 0.0978
3 NC_000913.3 1168253 1168262 1.11e-06 0.0978
3 NC_000913.3 1193248 1193257 1.11e-06 0.0978
3 NC_000913.3 1320766 1320775 1.11e-06 0.0978
3 NC_000913.3 1858221 1858230 1.11e-06 0.0978
3 NC_000913.3 1913670 1913679 1.11e-06 0.0978
3 NC_000913.3 1975385 1975394 1.11e-06 0.0978
3 NC_000913.3 2413045 2413054 1.11e-06 0.0978
3 NC_000913.3 2419494 2419503 1.11e-06 0.0978
3 NC_000913.3 2573208 2573217 1.11e-06 0.0978
3 NC_000913.3 2685027 2685036 1.11e-06 0.0978
3 NC_000913.3 2814891 2814900 1.11e-06 0.0978
3 NC_000913.3 2816397 2816406 1.11e-06 0.0978
3 NC_000913.3 2888222 2888231 1.11e-06 0.0978
3 NC_000913.3 2923816 2923825 1.11e-06 0.0978
3 NC_000913.3 3054396 3054405 1.11e-06 0.0978
3 NC_000913.3 3078496 3078505 1.11e-06 0.0978
3 NC_000913.3 3124580 3124589 1.11e-06 0.0978
3 NC_000913.3 3222109 3222118 1.11e-06 0.0978
3 NC_000913.3 3255952 3255961 1.11e-06 0.0978
3 NC_000913.3 3262341 3262350 1.11e-06 0.0978
3 NC_000913.3 3263441 3263450 1.11e-06 0.0978
3 NC_000913.3 3432317 3432326 1.11e-06 0.0978
3 NC_000913.3 3512849 3512858 1.11e-06 0.0978
3 NC_000913.3 3876658 3876667 1.11e-06 0.0978
3 NC_000913.3 3877351 3877360 1.11e-06 0.0978
3 NC_000913.3 3912081 3912090 1.11e-06 0.0978
3 NC_000913.3 3988001 3988010 1.11e-06 0.0978
3 NC_000913.3 4034068 4034077 1.11e-06 0.0978
3 NC_000913.3 4091355 4091364 1.11e-06 0.0978
3 NC_000913.3 4113992 4114001 1.11e-06 0.0978
3 NC_000913.3 4244287 4244296 1.11e-06 0.0978
3 NC_000913.3 4349647 4349656 1.11e-06 0.0978
3 NC_000913.3 4482097 4482106 1.11e-06 0.0978
3 NC_000913.3 4607253 4607262 1.11e-06 0.0978
3 NC_000913.3 4629982 4629991 1.11e-06 0.0978
3 NC_000913.3 205012 205003 1.11e-06 0.0978
3 NC_000913.3 207769 207760 1.11e-06 0.0978
3 NC_000913.3 271889 271880 1.11e-06 0.0978
3 NC_000913.3 321692 321683 1.11e-06 0.0978
3 NC_000913.3 364428 364419 1.11e-06 0.0978
3 NC_000913.3 387154 387145 1.11e-06 0.0978
3 NC_000913.3 433230 433221 1.11e-06 0.0978
3 NC_000913.3 476335 476326 1.11e-06 0.0978
3 NC_000913.3 496206 496197 1.11e-06 0.0978
3 NC_000913.3 646288 646279 1.11e-06 0.0978
3 NC_000913.3 835749 835740 1.11e-06 0.0978
3 NC_000913.3 894297 894288 1.11e-06 0.0978
3 NC_000913.3 930066 930057 1.11e-06 0.0978
3 NC_000913.3 1288636 1288627 1.11e-06 0.0978
3 NC_000913.3 1291709 1291700 1.11e-06 0.0978
3 NC_000913.3 1324596 1324587 1.11e-06 0.0978
3 NC_000913.3 1332512 1332503 1.11e-06 0.0978
3 NC_000913.3 1375370 1375361 1.11e-06 0.0978
3 NC_000913.3 1486727 1486718 1.11e-06 0.0978
3 NC_000913.3 1690946 1690937 1.11e-06 0.0978
3 NC_000913.3 1701154 1701145 1.11e-06 0.0978
3 NC_000913.3 1705012 1705003 1.11e-06 0.0978
3 NC_000913.3 1746904 1746895 1.11e-06 0.0978
3 NC_000913.3 1893523 1893514 1.11e-06 0.0978
3 NC_000913.3 1931106 1931097 1.11e-06 0.0978
3 NC_000913.3 1961319 1961310 1.11e-06 0.0978
3 NC_000913.3 2276639 2276630 1.11e-06 0.0978
3 NC_000913.3 2284204 2284195 1.11e-06 0.0978
3 NC_000913.3 2371762 2371753 1.11e-06 0.0978
3 NC_000913.3 2454847 2454838 1.11e-06 0.0978
3 NC_000913.3 2625847 2625838 1.11e-06 0.0978
3 NC_000913.3 2811061 2811052 1.11e-06 0.0978
3 NC_000913.3 2841143 2841134 1.11e-06 0.0978
3 NC_000913.3 2858668 2858659 1.11e-06 0.0978
3 NC_000913.3 2999972 2999963 1.11e-06 0.0978
3 NC_000913.3 3007156 3007147 1.11e-06 0.0978
3 NC_000913.3 3063716 3063707 1.11e-06 0.0978
3 NC_000913.3 3211542 3211533 1.11e-06 0.0978
3 NC_000913.3 3229383 3229374 1.11e-06 0.0978
3 NC_000913.3 3304099 3304090 1.11e-06 0.0978
3 NC_000913.3 3342609 3342600 1.11e-06 0.0978
3 NC_000913.3 3347958 3347949 1.11e-06 0.0978
3 NC_000913.3 3404111 3404102 1.11e-06 0.0978
3 NC_000913.3 3422399 3422390 1.11e-06 0.0978
3 NC_000913.3 3437208 3437199 1.11e-06 0.0978
3 NC_000913.3 3539257 3539248 1.11e-06 0.0978
3 NC_000913.3 3563117 3563108 1.11e-06 0.0978
3 NC_000913.3 3701754 3701745 1.11e-06 0.0978
3 NC_000913.3 3803047 3803038 1.11e-06 0.0978
3 NC_000913.3 3886687 3886678 1.11e-06 0.0978
3 NC_000913.3 4020215 4020206 1.11e-06 0.0978
3 NC_000913.3 4043517 4043508 1.11e-06 0.0978
3 NC_000913.3 4279076 4279067 1.11e-06 0.0978
3 NC_000913.3 4509766 4509757 1.11e-06 0.0978
3 NC_000913.3 4608467 4608458 1.11e-06 0.0978
1 NC_000913.3 2004625 2004605 4.66e-06 0.519
1 NC_000913.3 3243705 3243725 4.66e-06 0.519
1 NC_000913.3 4354816 4354836 4.66e-06 0.519
1 NC_000913.3 4183986 4183966 4.86e-06 0.519
1 NC_000913.3 1057947 1057967 5.07e-06 0.519
1 NC_000913.3 1411875 1411895 5.07e-06 0.519
1 NC_000913.3 2430840 2430820 5.07e-06 0.519
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1 NC_000913.3 3252906 3252926 7.31e-05 0.669
1 NC_000913.3 3315199 3315219 7.31e-05 0.669
1 NC_000913.3 3480851 3480871 7.31e-05 0.669
1 NC_000913.3 3697470 3697490 7.31e-05 0.669
1 NC_000913.3 4069859 4069879 7.31e-05 0.669
1 NC_000913.3 4364626 4364646 7.31e-05 0.669
1 NC_000913.3 4576626 4576646 7.31e-05 0.669
1 NC_000913.3 260893 260873 7.31e-05 0.669
1 NC_000913.3 338154 338134 7.31e-05 0.669
1 NC_000913.3 522595 522575 7.31e-05 0.669
1 NC_000913.3 773393 773373 7.31e-05 0.669
1 NC_000913.3 856018 855998 7.31e-05 0.669
1 NC_000913.3 1192686 1192666 7.31e-05 0.669
1 NC_000913.3 1810844 1810824 7.31e-05 0.669
1 NC_000913.3 1832106 1832086 7.31e-05 0.669
1 NC_000913.3 2251700 2251680 7.31e-05 0.669
1 NC_000913.3 2371105 2371085 7.31e-05 0.669
1 NC_000913.3 2512895 2512875 7.31e-05 0.669
1 NC_000913.3 2770513 2770493 7.31e-05 0.669
1 NC_000913.3 2786597 2786577 7.31e-05 0.669
1 NC_000913.3 3359725 3359705 7.31e-05 0.669
1 NC_000913.3 4060771 4060751 7.31e-05 0.669
1 NC_000913.3 78126 78146 7.55e-05 0.673
1 NC_000913.3 202310 202330 7.55e-05 0.673
1 NC_000913.3 363394 363414 7.55e-05 0.673
1 NC_000913.3 1080841 1080861 7.55e-05 0.673
1 NC_000913.3 1319967 1319987 7.55e-05 0.673
1 NC_000913.3 1643566 1643586 7.55e-05 0.673
1 NC_000913.3 1740216 1740236 7.55e-05 0.673
1 NC_000913.3 2649707 2649727 7.55e-05 0.673
1 NC_000913.3 2874502 2874522 7.55e-05 0.673
1 NC_000913.3 3892805 3892825 7.55e-05 0.673
1 NC_000913.3 4176855 4176875 7.55e-05 0.673
1 NC_000913.3 121777 121757 7.55e-05 0.673
1 NC_000913.3 244696 244676 7.55e-05 0.673
1 NC_000913.3 464044 464024 7.55e-05 0.673
1 NC_000913.3 825075 825055 7.55e-05 0.673
1 NC_000913.3 1026023 1026003 7.55e-05 0.673
1 NC_000913.3 1123644 1123624 7.55e-05 0.673
1 NC_000913.3 1358613 1358593 7.55e-05 0.673
1 NC_000913.3 1652215 1652195 7.55e-05 0.673
1 NC_000913.3 1921003 1920983 7.55e-05 0.673
1 NC_000913.3 2279233 2279213 7.55e-05 0.673
1 NC_000913.3 2435058 2435038 7.55e-05 0.673
1 NC_000913.3 3194510 3194490 7.55e-05 0.673
1 NC_000913.3 3353752 3353732 7.55e-05 0.673
1 NC_000913.3 3470418 3470398 7.55e-05 0.673
1 NC_000913.3 3913561 3913541 7.55e-05 0.673
1 NC_000913.3 4190810 4190790 7.55e-05 0.673
1 NC_000913.3 4588281 4588261 7.55e-05 0.673
1 NC_000913.3 9749 9769 7.8e-05 0.675
1 NC_000913.3 26486 26506 7.8e-05 0.675
1 NC_000913.3 134872 134892 7.8e-05 0.675
1 NC_000913.3 446247 446267 7.8e-05 0.675
1 NC_000913.3 709275 709295 7.8e-05 0.675
1 NC_000913.3 2301465 2301485 7.8e-05 0.675
1 NC_000913.3 2556152 2556172 7.8e-05 0.675
1 NC_000913.3 3261252 3261272 7.8e-05 0.675
1 NC_000913.3 3644784 3644804 7.8e-05 0.675
1 NC_000913.3 4086422 4086442 7.8e-05 0.675
1 NC_000913.3 4221502 4221522 7.8e-05 0.675
1 NC_000913.3 4583347 4583367 7.8e-05 0.675
1 NC_000913.3 79518 79498 7.8e-05 0.675
1 NC_000913.3 205209 205189 7.8e-05 0.675
1 NC_000913.3 720365 720345 7.8e-05 0.675
1 NC_000913.3 1078629 1078609 7.8e-05 0.675
1 NC_000913.3 1197245 1197225 7.8e-05 0.675
1 NC_000913.3 1256784 1256764 7.8e-05 0.675
1 NC_000913.3 1336278 1336258 7.8e-05 0.675
1 NC_000913.3 1451879 1451859 7.8e-05 0.675
1 NC_000913.3 1517156 1517136 7.8e-05 0.675
1 NC_000913.3 1808764 1808744 7.8e-05 0.675
1 NC_000913.3 2297171 2297151 7.8e-05 0.675
1 NC_000913.3 2473774 2473754 7.8e-05 0.675
1 NC_000913.3 2629489 2629469 7.8e-05 0.675
1 NC_000913.3 3183343 3183323 7.8e-05 0.675
1 NC_000913.3 3204211 3204191 7.8e-05 0.675
1 NC_000913.3 3246686 3246666 7.8e-05 0.675
1 NC_000913.3 3269282 3269262 7.8e-05 0.675
1 NC_000913.3 3355466 3355446 7.8e-05 0.675
1 NC_000913.3 3505936 3505916 7.8e-05 0.675
1 NC_000913.3 387359 387379 8.06e-05 0.677
1 NC_000913.3 512871 512891 8.06e-05 0.677
1 NC_000913.3 558463 558483 8.06e-05 0.677
1 NC_000913.3 934912 934932 8.06e-05 0.677
1 NC_000913.3 1157025 1157045 8.06e-05 0.677
1 NC_000913.3 1326277 1326297 8.06e-05 0.677
1 NC_000913.3 2396153 2396173 8.06e-05 0.677
1 NC_000913.3 2602762 2602782 8.06e-05 0.677
1 NC_000913.3 2965158 2965178 8.06e-05 0.677
1 NC_000913.3 3026675 3026695 8.06e-05 0.677
1 NC_000913.3 3272699 3272719 8.06e-05 0.677
1 NC_000913.3 3646760 3646780 8.06e-05 0.677
1 NC_000913.3 3846007 3846027 8.06e-05 0.677
1 NC_000913.3 4164664 4164684 8.06e-05 0.677
1 NC_000913.3 4418303 4418323 8.06e-05 0.677
1 NC_000913.3 4441628 4441648 8.06e-05 0.677
1 NC_000913.3 4638928 4638948 8.06e-05 0.677
1 NC_000913.3 206559 206539 8.06e-05 0.677
1 NC_000913.3 561252 561232 8.06e-05 0.677
1 NC_000913.3 886314 886294 8.06e-05 0.677
1 NC_000913.3 955119 955099 8.06e-05 0.677
1 NC_000913.3 1344880 1344860 8.06e-05 0.677
1 NC_000913.3 1625010 1624990 8.06e-05 0.677
1 NC_000913.3 2389577 2389557 8.06e-05 0.677
1 NC_000913.3 2425729 2425709 8.06e-05 0.677
1 NC_000913.3 2576093 2576073 8.06e-05 0.677
1 NC_000913.3 2967762 2967742 8.06e-05 0.677
1 NC_000913.3 2988292 2988272 8.06e-05 0.677
1 NC_000913.3 3358433 3358413 8.06e-05 0.677
1 NC_000913.3 3818248 3818228 8.06e-05 0.677
1 NC_000913.3 3970611 3970591 8.06e-05 0.677
1 NC_000913.3 4575081 4575061 8.06e-05 0.677
1 NC_000913.3 140746 140766 8.33e-05 0.677
1 NC_000913.3 169857 169877 8.33e-05 0.677
1 NC_000913.3 1240708 1240728 8.33e-05 0.677
1 NC_000913.3 1242125 1242145 8.33e-05 0.677
1 NC_000913.3 1321960 1321980 8.33e-05 0.677
1 NC_000913.3 1705596 1705616 8.33e-05 0.677
1 NC_000913.3 1838356 1838376 8.33e-05 0.677
1 NC_000913.3 2431831 2431851 8.33e-05 0.677
1 NC_000913.3 3243364 3243384 8.33e-05 0.677
1 NC_000913.3 3272599 3272619 8.33e-05 0.677
1 NC_000913.3 3526313 3526333 8.33e-05 0.677
1 NC_000913.3 3709093 3709113 8.33e-05 0.677
1 NC_000913.3 4374026 4374046 8.33e-05 0.677
1 NC_000913.3 4555994 4556014 8.33e-05 0.677
1 NC_000913.3 125629 125609 8.33e-05 0.677
1 NC_000913.3 182260 182240 8.33e-05 0.677
1 NC_000913.3 199209 199189 8.33e-05 0.677
1 NC_000913.3 316976 316956 8.33e-05 0.677
1 NC_000913.3 724805 724785 8.33e-05 0.677
1 NC_000913.3 725825 725805 8.33e-05 0.677
1 NC_000913.3 1110499 1110479 8.33e-05 0.677
1 NC_000913.3 1566528 1566508 8.33e-05 0.677
1 NC_000913.3 1680583 1680563 8.33e-05 0.677
1 NC_000913.3 2153425 2153405 8.33e-05 0.677
1 NC_000913.3 2211674 2211654 8.33e-05 0.677
1 NC_000913.3 2333106 2333086 8.33e-05 0.677
1 NC_000913.3 2386995 2386975 8.33e-05 0.677
1 NC_000913.3 2483506 2483486 8.33e-05 0.677
1 NC_000913.3 2798521 2798501 8.33e-05 0.677
1 NC_000913.3 2949067 2949047 8.33e-05 0.677
1 NC_000913.3 3001049 3001029 8.33e-05 0.677
1 NC_000913.3 3157037 3157017 8.33e-05 0.677
1 NC_000913.3 3193475 3193455 8.33e-05 0.677
1 NC_000913.3 3626380 3626360 8.33e-05 0.677
1 NC_000913.3 3985995 3985975 8.33e-05 0.677
1 NC_000913.3 4349098 4349078 8.33e-05 0.677
1 NC_000913.3 190937 190957 8.6e-05 0.68
1 NC_000913.3 536876 536896 8.6e-05 0.68
1 NC_000913.3 584613 584633 8.6e-05 0.68
1 NC_000913.3 791737 791757 8.6e-05 0.68
1 NC_000913.3 1055751 1055771 8.6e-05 0.68
1 NC_000913.3 1142926 1142946 8.6e-05 0.68
1 NC_000913.3 1344067 1344087 8.6e-05 0.68
1 NC_000913.3 1708090 1708110 8.6e-05 0.68
1 NC_000913.3 1811326 1811346 8.6e-05 0.68
1 NC_000913.3 2706470 2706490 8.6e-05 0.68
1 NC_000913.3 3038307 3038327 8.6e-05 0.68
1 NC_000913.3 3221775 3221795 8.6e-05 0.68
1 NC_000913.3 3376691 3376711 8.6e-05 0.68
1 NC_000913.3 3463453 3463473 8.6e-05 0.68
1 NC_000913.3 4229972 4229992 8.6e-05 0.68
1 NC_000913.3 4636008 4636028 8.6e-05 0.68
1 NC_000913.3 12552 12532 8.6e-05 0.68
1 NC_000913.3 123982 123962 8.6e-05 0.68
1 NC_000913.3 264901 264881 8.6e-05 0.68
1 NC_000913.3 346534 346514 8.6e-05 0.68
1 NC_000913.3 820370 820350 8.6e-05 0.68
1 NC_000913.3 991068 991048 8.6e-05 0.68
1 NC_000913.3 1236325 1236305 8.6e-05 0.68
1 NC_000913.3 1821286 1821266 8.6e-05 0.68
1 NC_000913.3 2163372 2163352 8.6e-05 0.68
1 NC_000913.3 2194663 2194643 8.6e-05 0.68
1 NC_000913.3 2621057 2621037 8.6e-05 0.68
1 NC_000913.3 3222756 3222736 8.6e-05 0.68
1 NC_000913.3 3491510 3491490 8.6e-05 0.68
1 NC_000913.3 3937396 3937376 8.6e-05 0.68
1 NC_000913.3 3965683 3965663 8.6e-05 0.68
1 NC_000913.3 4326458 4326438 8.6e-05 0.68
1 NC_000913.3 4536033 4536013 8.6e-05 0.68
1 NC_000913.3 509748 509768 8.88e-05 0.685
1 NC_000913.3 657527 657547 8.88e-05 0.685
1 NC_000913.3 1142293 1142313 8.88e-05 0.685
1 NC_000913.3 1311941 1311961 8.88e-05 0.685
1 NC_000913.3 1318135 1318155 8.88e-05 0.685
1 NC_000913.3 1720893 1720913 8.88e-05 0.685
1 NC_000913.3 1785877 1785897 8.88e-05 0.685
1 NC_000913.3 2083086 2083106 8.88e-05 0.685
1 NC_000913.3 2233282 2233302 8.88e-05 0.685
1 NC_000913.3 2596846 2596866 8.88e-05 0.685
1 NC_000913.3 2606948 2606968 8.88e-05 0.685
1 NC_000913.3 3734453 3734473 8.88e-05 0.685
1 NC_000913.3 4535005 4535025 8.88e-05 0.685
1 NC_000913.3 251470 251450 8.88e-05 0.685
1 NC_000913.3 480914 480894 8.88e-05 0.685
1 NC_000913.3 1279636 1279616 8.88e-05 0.685
1 NC_000913.3 1523973 1523953 8.88e-05 0.685
1 NC_000913.3 2284091 2284071 8.88e-05 0.685
1 NC_000913.3 2387019 2386999 8.88e-05 0.685
1 NC_000913.3 2939482 2939462 8.88e-05 0.685
1 NC_000913.3 2951553 2951533 8.88e-05 0.685
1 NC_000913.3 3472981 3472961 8.88e-05 0.685
1 NC_000913.3 3510377 3510357 8.88e-05 0.685
1 NC_000913.3 3604046 3604026 8.88e-05 0.685
1 NC_000913.3 3820443 3820423 8.88e-05 0.685
1 NC_000913.3 3905966 3905946 8.88e-05 0.685
1 NC_000913.3 4352251 4352231 8.88e-05 0.685
1 NC_000913.3 4519590 4519570 8.88e-05 0.685
1 NC_000913.3 60972 60992 9.17e-05 0.685
1 NC_000913.3 225622 225642 9.17e-05 0.685
1 NC_000913.3 419310 419330 9.17e-05 0.685
1 NC_000913.3 865412 865432 9.17e-05 0.685
1 NC_000913.3 947050 947070 9.17e-05 0.685
1 NC_000913.3 1087403 1087423 9.17e-05 0.685
1 NC_000913.3 1210815 1210835 9.17e-05 0.685
1 NC_000913.3 1784092 1784112 9.17e-05 0.685
1 NC_000913.3 2078041 2078061 9.17e-05 0.685
1 NC_000913.3 2260802 2260822 9.17e-05 0.685
1 NC_000913.3 2312467 2312487 9.17e-05 0.685
1 NC_000913.3 2660613 2660633 9.17e-05 0.685
1 NC_000913.3 2776155 2776175 9.17e-05 0.685
1 NC_000913.3 3680622 3680642 9.17e-05 0.685
1 NC_000913.3 4001797 4001817 9.17e-05 0.685
1 NC_000913.3 4037382 4037402 9.17e-05 0.685
1 NC_000913.3 4107953 4107973 9.17e-05 0.685
1 NC_000913.3 4120791 4120811 9.17e-05 0.685
1 NC_000913.3 4276990 4277010 9.17e-05 0.685
1 NC_000913.3 4416525 4416545 9.17e-05 0.685
1 NC_000913.3 4429171 4429191 9.17e-05 0.685
1 NC_000913.3 4448043 4448063 9.17e-05 0.685
1 NC_000913.3 4612111 4612131 9.17e-05 0.685
1 NC_000913.3 97789 97769 9.17e-05 0.685
1 NC_000913.3 420769 420749 9.17e-05 0.685
1 NC_000913.3 674878 674858 9.17e-05 0.685
1 NC_000913.3 777112 777092 9.17e-05 0.685
1 NC_000913.3 1019223 1019203 9.17e-05 0.685
1 NC_000913.3 1312073 1312053 9.17e-05 0.685
1 NC_000913.3 1833190 1833170 9.17e-05 0.685
1 NC_000913.3 1949936 1949916 9.17e-05 0.685
1 NC_000913.3 2106576 2106556 9.17e-05 0.685
1 NC_000913.3 2392932 2392912 9.17e-05 0.685
1 NC_000913.3 2814490 2814470 9.17e-05 0.685
1 NC_000913.3 2871532 2871512 9.17e-05 0.685
1 NC_000913.3 2962264 2962244 9.17e-05 0.685
1 NC_000913.3 3426911 3426891 9.17e-05 0.685
1 NC_000913.3 4087666 4087646 9.17e-05 0.685
1 NC_000913.3 4294333 4294313 9.17e-05 0.685
1 NC_000913.3 4404988 4404968 9.17e-05 0.685
1 NC_000913.3 255766 255786 9.46e-05 0.689
1 NC_000913.3 269402 269422 9.46e-05 0.689
1 NC_000913.3 312900 312920 9.46e-05 0.689
1 NC_000913.3 393308 393328 9.46e-05 0.689
1 NC_000913.3 589654 589674 9.46e-05 0.689
1 NC_000913.3 675726 675746 9.46e-05 0.689
1 NC_000913.3 1434774 1434794 9.46e-05 0.689
1 NC_000913.3 1474046 1474066 9.46e-05 0.689
1 NC_000913.3 1477538 1477558 9.46e-05 0.689
1 NC_000913.3 1656912 1656932 9.46e-05 0.689
1 NC_000913.3 1692384 1692404 9.46e-05 0.689
1 NC_000913.3 1927491 1927511 9.46e-05 0.689
1 NC_000913.3 2168286 2168306 9.46e-05 0.689
1 NC_000913.3 2302455 2302475 9.46e-05 0.689
1 NC_000913.3 2457024 2457044 9.46e-05 0.689
1 NC_000913.3 2895824 2895844 9.46e-05 0.689
1 NC_000913.3 3819989 3820009 9.46e-05 0.689
1 NC_000913.3 4220310 4220330 9.46e-05 0.689
1 NC_000913.3 4284197 4284217 9.46e-05 0.689
1 NC_000913.3 404483 404463 9.46e-05 0.689
1 NC_000913.3 601254 601234 9.46e-05 0.689
1 NC_000913.3 1260072 1260052 9.46e-05 0.689
1 NC_000913.3 1305640 1305620 9.46e-05 0.689
1 NC_000913.3 2359145 2359125 9.46e-05 0.689
1 NC_000913.3 2411278 2411258 9.46e-05 0.689
1 NC_000913.3 2847604 2847584 9.46e-05 0.689
1 NC_000913.3 3344897 3344877 9.46e-05 0.689
1 NC_000913.3 4448409 4448389 9.46e-05 0.689
1 NC_000913.3 140535 140555 9.77e-05 0.689
1 NC_000913.3 230997 231017 9.77e-05 0.689
1 NC_000913.3 458218 458238 9.77e-05 0.689
1 NC_000913.3 467686 467706 9.77e-05 0.689
1 NC_000913.3 754993 755013 9.77e-05 0.689
1 NC_000913.3 831605 831625 9.77e-05 0.689
1 NC_000913.3 858994 859014 9.77e-05 0.689
1 NC_000913.3 879200 879220 9.77e-05 0.689
1 NC_000913.3 894326 894346 9.77e-05 0.689
1 NC_000913.3 1066918 1066938 9.77e-05 0.689
1 NC_000913.3 1196428 1196448 9.77e-05 0.689
1 NC_000913.3 1256373 1256393 9.77e-05 0.689
1 NC_000913.3 1424698 1424718 9.77e-05 0.689
1 NC_000913.3 1459559 1459579 9.77e-05 0.689
1 NC_000913.3 1481789 1481809 9.77e-05 0.689
1 NC_000913.3 1784601 1784621 9.77e-05 0.689
1 NC_000913.3 1876181 1876201 9.77e-05 0.689
1 NC_000913.3 2084376 2084396 9.77e-05 0.689
1 NC_000913.3 2130719 2130739 9.77e-05 0.689
1 NC_000913.3 2449328 2449348 9.77e-05 0.689
1 NC_000913.3 2544898 2544918 9.77e-05 0.689
1 NC_000913.3 2753867 2753887 9.77e-05 0.689
1 NC_000913.3 2914934 2914954 9.77e-05 0.689
1 NC_000913.3 3546920 3546940 9.77e-05 0.689
1 NC_000913.3 4219939 4219959 9.77e-05 0.689
1 NC_000913.3 4280851 4280871 9.77e-05 0.689
1 NC_000913.3 4467250 4467270 9.77e-05 0.689
1 NC_000913.3 67133 67113 9.77e-05 0.689
1 NC_000913.3 161704 161684 9.77e-05 0.689
1 NC_000913.3 775317 775297 9.77e-05 0.689
1 NC_000913.3 812832 812812 9.77e-05 0.689
1 NC_000913.3 817419 817399 9.77e-05 0.689
1 NC_000913.3 1184185 1184165 9.77e-05 0.689
1 NC_000913.3 1430239 1430219 9.77e-05 0.689
1 NC_000913.3 1534018 1533998 9.77e-05 0.689
1 NC_000913.3 1549063 1549043 9.77e-05 0.689
1 NC_000913.3 1985085 1985065 9.77e-05 0.689
1 NC_000913.3 2183566 2183546 9.77e-05 0.689
1 NC_000913.3 2196022 2196002 9.77e-05 0.689
1 NC_000913.3 2302467 2302447 9.77e-05 0.689
1 NC_000913.3 2595048 2595028 9.77e-05 0.689
1 NC_000913.3 3273231 3273211 9.77e-05 0.689
1 NC_000913.3 3362833 3362813 9.77e-05 0.689
1 NC_000913.3 3870689 3870669 9.77e-05 0.689
1 NC_000913.3 4043531 4043511 9.77e-05 0.689
1 NC_000913.3 4085763 4085743 9.77e-05 0.689
1 NC_000913.3 4141022 4141002 9.77e-05 0.689
DEBUGGING INFORMATION

Command line: 

fimo meme.txt ecoli.fasta

Settings: 




output directory = fimo_out
MEME file name = meme.txt
sequence file name = ecoli.fasta




background file name = (null)
motif name = motif
allow clobber = true




compute q-values = true
output p-threshold set = false
output q-threshold set = false




text only = false
scan both strands = true
max sequence length = 250000000




output q-value threshold =   1
output p-value threshold = 0.0001
pseudocount = 0.1




verbosity = 2

This information can be useful in the event you wish to report a problem with the FIMO software.

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