#Query ID	Target ID	Optimal offset	p-value	E-value	q-value	Overlap	Query consensus	Target consensus	Orientation
1	PurR_17-3	-5	2.40435e-07	2.33222e-05	4.61539e-05	16	TTTAGAAGCAAACGTTTTCTT	ACGCAAACGTTTTCCTT	+
1	IHF_19-54	1	0.00101467	0.0984226	0.064925	18	TTTAGAAGCAAACGTTTTCTT	CTTCAGAACCAAACCTTTA	-
1	OmpR_17-11	1	0.0364304	3.53375	0.98922	16	TTTAGAAGCAAACGTTTTCTT	TTTTTGAAACATATTTT	-
1	Ada_28-0	8	0.0385749	3.74176	0.98922	20	TTTAGAAGCAAACGTTTTCTT	AAACATTCTTATGCTGCAATGTTTTGCG	-
1	CpxR_14-3	-9	0.0559452	5.42669	0.98922	12	TTTAGAAGCAAACGTTTTCTT	TTACGTTTTTTTAC	+
1	Fis_26-109	6	0.0575804	5.5853	0.98922	20	TTTAGAAGCAAACGTTTTCTT	AACGTCTTTTAAATCTAATTTATTGC	-
1	H_NS_28-4	1	0.0651714	6.32163	0.98922	21	TTTAGAAGCAAACGTTTTCTT	TGTTATGCGATAATAATTTCATACAATA	-
1	Fis_26-32	9	0.0682429	6.61956	0.98922	17	TTTAGAAGCAAACGTTTTCTT	TTTGGTTATTTTTTCAGCAACAGAAC	-
1	TrpR_20-0	-1	0.0862138	8.36274	0.98922	20	TTTAGAAGCAAACGTTTTCTT	GTACTAGTTAACTAGTACAA	-
1	AraC_19-8	-1	0.0894068	8.67246	0.98922	19	TTTAGAAGCAAACGTTTTCTT	GGATCGGCTAATCTTATGG	-
2	Fur_21-21	8	0.00946026	0.917645	1	11	AGTGCTGCGGC	CGAGGGTAATTTCGATTACTA	-
2	MalT_9-2	0	0.0140078	1.35876	1	9	AGTGCTGCGGC	GGGGATGAG	-
2	Fis_26-37	8	0.0162532	1.57656	1	11	AGTGCTGCGGC	TGCAGGGGATTAATGCGGAATTGAGT	+
2	CRP_25-81	12	0.0210717	2.04395	1	11	AGTGCTGCGGC	TAAAATTTTTGATTGGTTGCAAAAT	+
2	FruR_18-2	-1	0.0403929	3.91811	1	10	AGTGCTGCGGC	GTGCTGAATCGATTCAGT	-
2	NarL_9-3	1	0.0507427	4.92205	1	8	AGTGCTGCGGC	CAGTGTTGT	-
2	Ada_28-0	5	0.0515339	4.99879	1	11	AGTGCTGCGGC	CGCAAAACATTGCTGCTTAAGAATGTTT	+
2	Lrp_17-26	-1	0.0703827	6.82713	1	10	AGTGCTGCGGC	GTTATGGGGGCTCTCAT	-
2	Fis_26-4	6	0.0860987	8.35157	1	11	AGTGCTGCGGC	TAAAAAATTGCCAAATCGTTATTGTT	+
2	PurR_17-3	7	0.0913552	8.86145	1	10	AGTGCTGCGGC	AAGGAAAACGTTTGCGT	-
2	CRP_25-141	3	0.0956044	9.27362	1	11	AGTGCTGCGGC	TGAATGGCTTTAGCAAGTGCCTGAT	-
3	Fis_26-32	7	0.00055411	0.0537487	0.104473	10	GTTTTTCCAG	TTTGGTTATTTTTTCAGCAACAGAAC	-
3	GlpR_20-5	5	0.00703475	0.68237	0.420009	10	GTTTTTCCAG	TGTTCGTTTTTGCTCATATT	-
3	CytR_24-5	1	0.0101702	0.986505	0.420009	10	GTTTTTCCAG	AATTTTTGCAATAGATTTCATTCA	-
3	H_NS_28-24	5	0.0108483	1.05228	0.420009	10	GTTTTTCCAG	CGCATTTTTTGCCTGATTTGGTTAAATG	-
3	IHF_19-19	9	0.0111384	1.08042	0.420009	10	GTTTTTCCAG	TAACTTATTGATTTTTAAA	-
3	GadE_19-3	3	0.0231667	2.24717	0.544405	10	GTTTTTCCAG	TAGGTTTTTGTTATTTAAA	+
3	CpxR_14-3	4	0.0261273	2.53434	0.544405	10	GTTTTTCCAG	TTACGTTTTTTTAC	+
3	Lrp_17-41	4	0.0270648	2.62528	0.544405	10	GTTTTTCCAG	AATAGTATTTTATGCTG	+
3	AraC_19-9	8	0.0305726	2.96554	0.544405	10	GTTTTTCCAG	TTATGGATTATTTTGCTGT	-
3	IHF_19-22	-1	0.0305726	2.96554	0.544405	9	GTTTTTCCAG	TTTTTTCAACAGTATGAAT	-
3	DnaA_10-1	-1	0.0365365	3.54404	0.544405	9	GTTTTTCCAG	TTTATCCACA	+
3	Fis_26-109	3	0.0372823	3.61639	0.544405	10	GTTTTTCCAG	AACGTCTTTTAAATCTAATTTATTGC	-
3	CysB_13-5	5	0.0378501	3.67146	0.544405	8	GTTTTTCCAG	ATGTCATTATTCC	-
3	Lrp_17-15	2	0.0404243	3.92116	0.544405	10	GTTTTTCCAG	TAATTTATTCTGCATTT	+
3	XylR_17-3	7	0.0490688	4.75967	0.606888	10	GTTTTTCCAG	CAATTACGATTTTTCAT	+
3	PhoB_27-11	17	0.0515017	4.99566	0.606888	10	GTTTTTCCAG	ATGTTAGACTTCCGTCAGTTTTTTACG	-
3	Rob_23-2	7	0.0608932	5.90664	0.675348	10	GTTTTTCCAG	TGAAAATGTTTATCAAACCTTGC	+
3	Fis_26-25	9	0.0677649	6.57319	0.709806	10	GTTTTTCCAG	TGACTGCTCATTTTTTAACCATTAGG	+
3	Fis_26-108	9	0.0722039	7.00378	0.716497	10	GTTTTTCCAG	AATTTGCCGATTTTTCGCACGTTTTT	+