Database and Motifs | High-scoring Motif Occurences | Debugging Information | Results in TSV Format | Results in GFF3 Format |
FIMO version 5.1.1, (Release date: Wed Jan 29 15:00:42 2020 -0800)
For further information on how to interpret these results please access http://meme-suite.org//doc/fimo-output-format.html.
To get a copy of the FIMO software please access http://meme-suite.org
If you use FIMO in your research, please cite the following paper:
Charles E. Grant, Timothy L. Bailey, and William Stafford Noble,
"FIMO: Scanning for occurrences of a given motif",
Bioinformatics, 27(7):1017-1018, 2011.
[full text]
DATABASE 26.fasta
Database contains 1 sequences, 21000 residues
MOTIFS prodoric.meme (DNA)
MOTIF | WIDTH | BEST POSSIBLE MATCH |
---|---|---|
MX000001 | 15 | GTTGATCTTATCAAC |
MX000002 | 14 | TTGACCTGCATCAA |
MX000003 | 7 | TACCCAT |
MX000004 | 14 | TTGATTTATATCAA |
MX000005 | 16 | TGTGAAATACTTCACA |
MX000006 | 10 | TGAACAAGCG |
MX000007 | 17 | TGTCGCGTCGCTGCAAG |
MX000008 | 20 | TATGTTCGATAACGCACATT |
MX000009 | 21 | ATTTTGTTAAATTTTTTTTAA |
MX000010 | 8 | CAATGGAT |
MX000011 | 16 | CTGCAAGATCTGGTAG |
MX000012 | 16 | CTATCAGATCTGGTAG |
MX000013 | 19 | GATAATGATTATCATTATC |
MX000014 | 27 | AAACGAATCATTTAATATTGATTAAAT |
MX000015 | 8 | CAAAAAAT |
MX000016 | 23 | TATTATTTTATTTTAATAAAAAT |
MX000017 | 17 | AGTCAATTATAGTCAAA |
MX000018 | 18 | AGTCAAAATTAGTCAAAG |
MX000019 | 12 | TTTGTCGAAAAA |
MX000020 | 16 | ATTTGTACGTACTTAT |
MX000021 | 7 | TGTCGAA |
MX000022 | 8 | TGAAAGCG |
MX000023 | 13 | AAAATAAGATTTT |
MX000024 | 15 | ATAAGAATAACTTAT |
MX000025 | 14 | CGAACATATGTTCG |
MX000026 | 17 | TGTTAGAAAATATAACA |
MX000027 | 17 | TGTTATATATTTTTACA |
MX000028 | 14 | AAATCAATAAATTA |
MX000029 | 15 | GATTAAAAATTAAAC |
MX000030 | 19 | AGATTTTCTAGTTCTTCAG |
MX000031 | 17 | TGTTTATGGTTTGTTTA |
MX000032 | 9 | GGTAAATTT |
MX000033 | 31 | TGGAACTTTTCCACGCGCCGCGGTTCCAATT |
MX000034 | 32 | TGGAACTTTGCGGGCAAAAAGAGGTTCCAATC |
MX000035 | 10 | TGGAACTTTT |
MX000036 | 9 | GTTCCAATC |
MX000037 | 31 | CGGAACTTTACGATATAAAAACAATCTAACG |
MX000038 | 11 | TTATATTAAAA |
MX000039 | 17 | TTTTTTCCAAAAATCAT |
MX000041 | 16 | TTATTTTTAAAAAAAC |
MX000042 | 15 | GCGGCGTTGTGTCGC |
MX000043 | 16 | ATGAATTTTTATTCAT |
MX000044 | 25 | GAAAAAAAACAAAACGGTTTTTAAA |
MX000045 | 65 | TTTTTTTTTTTTAAAATGAAAGGTTTTTTTATAATTTATATTAAAATCATTTTTTAATTATATTT |
MX000046 | 20 | TTTCGGCATCACGCAAGAAA |
MX000047 | 12 | ATATAGGCCATT |
MX000048 | 15 | ATCTCAATTTGATAT |
MX000049 | 15 | ATTTAAAATTAAGAT |
MX000050 | 19 | TTTTATATTATAATATTTT |
MX000052 | 13 | AAGTGTTTTAAAA |
MX000053 | 29 | GGTTTTGCCTGCTTTATCAGTAACAATCC |
MX000054 | 20 | TATTTTGCATTAAGGAAACT |
MX000055 | 22 | GACTCTACCGTAGCATGATTTC |
MX000056 | 56 | CTAAGTTTTTTTTTTTTATTTCTATGCTATCCTATTCTATAATTTTTGTCATTCTA |
MX000057 | 31 | TGTATTATATTTTAAATTTCTTTTTTAATCA |
MX000058 | 11 | ATACTTTGTTT |
MX000059 | 20 | ATTAAATACGAACATTAATT |
MX000060 | 14 | TTAACATTTGTTAA |
MX000061 | 19 | CTTTTAAGCATTCCAGAGA |
MX000062 | 21 | TACGCAAATTTATTTTGCATT |
MX000063 | 21 | ATTTTTTTTATTATTTAGTTA |
MX000064 | 12 | AATGTTTTATTA |
MX000065 | 43 | TTCCTCGAAATGAACGAAGTATTCTACCGATAAAAACATTTAT |
MX000066 | 11 | AGTCATATTTG |
MX000067 | 12 | TGCATACAATTA |
MX000068 | 37 | AAAGTCATATTTGCCCTAATCTACGCATACAATGATA |
MX000069 | 36 | TTTGTCATAACTGTTGATTATGTGCATATACTTGTA |
MX000070 | 37 | TTATAATATTTGTACGATATATATGCATATTTTAATA |
MX000071 | 12 | AGGGGAAAAAAA |
MX000072 | 33 | ATAGTTTTACAAATATACGCTAAAGGGAAAAAG |
MX000073 | 32 | AAGGTTTTATTATTATTAAAAAGGGGTAAAAA |
MX000074 | 31 | CAGGTTTTTTTTTTTCCAAATCGGGAATAAT |
MX000075 | 30 | TATGTTTAGCTTTTTTCAGTAGGGAAAATT |
MX000076 | 12 | AAAGGATTTAAA |
MX000077 | 10 | ATCGAATTAT |
MX000078 | 53 | TTTAAACAACAAAAATTATTGATTTGGCACGATTCTTGCATTTTTATTAATTG |
MX000079 | 32 | TATGAAACCTTTTTCCATTTTAATCGTATAAA |
MX000080 | 12 | ATATGAAACCTT |
MX000081 | 10 | ATTCGTATAA |
MX000082 | 33 | TTTGAAACTTTTTCCAATTCATATTCGTCTAAT |
MX000083 | 12 | AATGAAACTTTT |
MX000084 | 12 | ATACGTCTAACA |
MX000085 | 33 | AATGAAACTTTTTTTTATTCTTATCCGTCTAAC |
MX000086 | 20 | GTTTTGTCGAATGTAAACAT |
MX000087 | 14 | GTTGTATATACAAG |
MX000088 | 23 | TTTTTGATACATTATGTATCAAA |
MX000089 | 23 | GTTTGTTTATCAAACAAACTAAC |
MX000090 | 19 | AAATCGTTATCATTTTATT |
MX000091 | 10 | TGTTAATTAA |
MX000092 | 46 | TATTTTCAATATTGGTGATGAATTTAACAATATTGAAAATTTGTTT |
MX000093 | 20 | ATTGTGATCTAGATCACATT |
MX000094 | 31 | TTATGGATATGGAAAATCTTTATTCATTAAT |
MX000095 | 17 | GGTGCACCTGGTGCACA |
MX000096 | 14 | CAGTATTTTATTCT |
MX000097 | 6 | CGAAAT |
MX000098 | 9 | TTATCCACA |
MX000099 | 16 | TGTCATAAATCTGTCA |
MX000100 | 49 | TTTTAATTAAAGCAAATTAAAAATTGGCACAAAATTTGCATTAAGTTGT |
MX000101 | 20 | CTCTACCGTTCGTCTGTAAG |
MX000102 | 14 | TTGACTTTCATCAA |
MX000103 | 39 | CGGTTTTTTCTAAAAAAAAAGGACCCTTTTTGAAAATCC |
MX000104 | 11 | CGTCGGTTTAT |
MX000105 | 20 | ACCCTTCGAAATTGAAAAAG |
MX000106 | 7 | TACCTCT |
MX000107 | 37 | ATTGATTTTGATAATTTGAGTGATGAGGTTTTTCAAT |
MX000108 | 18 | CGTAAAGAATATTTTACA |
MX000109 | 23 | TTTCGTAATTTTTTCTGTTTGTT |
MX000110 | 19 | TGTGATTTAGTTCACATTT |
MX000111 | 46 | GCATTTCGCCGTTCTTCGCCCTGGCACGACACTTGCTATTATCTGG |
MX000114 | 18 | ATAAGAATTTTATAGCAA |
MX000115 | 29 | TATCCATAATAATAGCGGAAAAGTCCATA |
MX000116 | 14 | TGAATAAAAATTCA |
MX000117 | 5 | CCAAT |
MX000118 | 54 | CCTATAAGTAAATCCAATGGAACTCATCATAAATGAGACTTTTACCTTATGACA |
MX000119 | 16 | AGTAAAACAATGTAAA |
MX000121 | 12 | TGCAAATTTGGT |
MX000123 | 16 | TGTTAGAATTCTAACA |
MX000124 | 17 | AGCTGGTCCGACCTGTT |
MX000125 | 14 | GCTGAATCGTTTAA |
MX000126 | 17 | TTAATCTCAAAATTAGT |
MX000127 | 7 | TTTTCGT |
MX000128 | 19 | GATAATGATAATGATTATC |
MX000129 | 13 | TGTAAACGGTTAC |
MX000130 | 14 | TGTAACCGTTTTCA |
MX000132 | 27 | TAAAGTTTCGCCTTTTCTTGCCGATAA |
MX000133 | 16 | ATGTTACCCATAACAA |
MX000134 | 12 | AGATAATTTAAT |
MX000135 | 18 | TTAGGATATTTTTTTTAT |
MX000136 | 27 | ATATTTCAATTTTTGCAATATATTTTT |
MX000137 | 21 | AATTGTGAGCGAATAACAATT |
MX000138 | 14 | GATAAAACGTTTTA |
MX000139 | 6 | GGAGGA |
MX000140 | 16 | CTGTATATATATACAG |
MX000141 | 10 | TGTAACATCT |
MX000142 | 10 | TTTACTTTTT |
MX000143 | 5 | CTAAT |
MX000144 | 23 | TTTTATTGCCCTGGCAAGTATTT |
MX000145 | 16 | AGACGTCTAAACGTCT |
MX000146 | 16 | AGACGTCTAGACGTCC |
MX000147 | 16 | AGACGTCTAGATGGCT |
MX000148 | 23 | CGCTATATACATGCCTATATAAC |
MX000149 | 11 | ATCATAAATTC |
MX000150 | 23 | GTTTTTTTATTTATCGAAAAATA |
MX000151 | 11 | TCGTAAAAAAC |
MX000152 | 6 | TGGCGC |
MX000153 | 7 | TAAAAAT |
MX000154 | 34 | TTTTTTAATCTATTTTTTCAATAGGTATTATCAA |
MX000155 | 46 | ACGATAGGTAATAGCTATAGATATAATAGGTTTCCCCGATTATCCG |
MX000156 | 14 | TAATACAAATTTAA |
MX000157 | 6 | TCAATT |
MX000158 | 7 | TGAAAAA |
MX000159 | 10 | GCAAACGTTT |
MX000160 | 14 | TAAGAATATTCCTA |
MX000161 | 23 | GTTAGTTCGCGGCGCGAAATAAG |
MX000162 | 21 | TTATTTCGAGCCGCGAAATAA |
MX000163 | 25 | ACGCGCAGAATTTTCTGCTGTACAC |
MX000164 | 25 | CTCTAACAGTATATTCTGCTGTGGC |
MX000165 | 20 | ATGGCACTATTTGTTAAATT |
MX000166 | 15 | TTGAAGATTCATCTG |
MX000167 | 20 | AGAAATAAACTATATTTCAG |
MX000168 | 21 | AGAAACAGATAGATTTTTTAG |
MX000169 | 7 | TACGTTT |
MX000170 | 20 | ATGGCACATTTTGTTAAAAA |
MX000171 | 49 | TTATTTCCGTGATTGCCAATAAATCATTTTCGTGTGAATAAGGAGAAAG |
MX000172 | 51 | ATCTTGAAAAATCGACGTTTTTTACGTGGTTTTCCGTCGAAAATTTAAGGT |
MX000173 | 19 | TCCTCAAGTTAACTTGAGG |
MX000174 | 20 | ATGGCACTATATGTTAAATA |
MX000175 | 30 | TTTTTTAATTATAATAGGAAATATTTCTCT |
MX000176 | 22 | TTTGTGAATTATTGAGCAAATT |
MX000177 | 14 | TGGTTTCGTTAACG |
MX000178 | 8 | CTGTTCAT |
MX000179 | 13 | CCAATACAGTTTT |
MX000180 | 56 | ATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTG |
MX000181 | 22 | TTTGTGATATTTATTTCACAAA |
MX000182 | 18 | TGTAAATTTATATTTACA |
MX000183 | 20 | TGTACTAGTTAACTAGTACA |
MX000184 | 35 | GTTAAAAAGTGATCGATATATTTGAAATCAAGTTT |
MX000185 | 33 | AAAAATCTAAAATTGTATTTGAAATATAATAAT |
MX000186 | 14 | GGCCATTACCCAAC |
MX000188 | 16 | AATTATAATTTTAATT |
MX000190 | 14 | TTGATGCATGTCAA |
MX000191 | 19 | TGTCAAGGAAATTTGACAT |
MX000192 | 12 | TTGCGGCAGCAC |
MX000193 | 18 | TTTGAAACCGTTTTCAAA |
MX000194 | 15 | TTGAAGCGTTTTCAT |
MX000195 | 20 | ATGAATGACTATTCATTCAT |
MX000196 | 6 | ATTGAC |
MX000197 | 7 | TTAGGAA |
MX000198 | 24 | TAATACATATTAAAATTATAGGAA |
MX000199 | 9 | TATTTTAAT |
MX000200 | 18 | TTTCCAGGAATATGAGAA |
MX000201 | 9 | TGTATTATT |
MX000202 | 5 | TTATA |
MX000203 | 14 | GGACTAAGGCCCCT |
MX000204 | 6 | TGATTC |
MX000205 | 12 | CCTTAATTATAA |
MX000207 | 16 | TAGACAGCGTGGTCTA |
MX000208 | 16 | TGCGGCAATCGGTCAC |
MX000209 | 14 | GTAATTATATATAC |
MX000210 | 14 | GTAACAACTGCTAC |
MX000211 | 7 | TGAAATT |
Random model letter frequencies (--nrdb--):
A 0.275 C 0.225 G 0.225 T 0.275
Motif ID | Alt ID | Sequence Name | Strand | Start | End | p-value | q-value | Matched Sequence |
---|---|---|---|---|---|---|---|---|
MX000045 | CodY | strain | + | 877 | 941 | 1.62e-09 | 3.8e-05 | TGATTATCTTGAAAAATGTCAGCAAGATTTAAATGACAGAATAAAAAATATTTCTAATGATAAAA |
MX000041 | CovR | strain | - | 20881 | 20896 | 3.6e-08 | 0.00108 | CTATTTTTTAAAAAAA |
MX000027 | GlnR | strain | + | 802 | 818 | 1.07e-07 | 0.00325 | TGATAAAAATGTTTACA |
MX000083 | SigX | strain | - | 17431 | 17442 | 1.24e-07 | 0.00432 | AATGAAACTTTT |
MX000012 | LasR | strain | - | 6366 | 6381 | 1.75e-07 | 0.00695 | CTGCCTTTTCTGCCAG |
MX000041 | CovR | strain | - | 20880 | 20895 | 1.89e-07 | 0.00284 | TATTTTTTAAAAAAAA |
MX000188 | SarA | strain | - | 2494 | 2509 | 1.99e-07 | 0.0049 | AATTATATTTTTAACT |
MX000118 | CynR | strain | + | 12381 | 12434 | 2e-07 | 0.00665 | CAGATGAGTTTATACAATGGAAAGCAGAGAAAATAGCACTTGTAGCTGATAGGG |
MX000045 | CodY | strain | + | 2392 | 2456 | 2.44e-07 | 0.00286 | ATTTGATTATGAAAAAGCAAAGCCATTATTAATTTATAAGATGCGATTTTCATATCCAGTTAATG |
MX000154 | OxyR | strain | - | 20178 | 20211 | 3.67e-07 | 0.00611 | AAATTTATTCTATCTTTTAAATCGGAATTTTCCT |
MX000065 | SigD | strain | + | 9777 | 9819 | 3.95e-07 | 0.0136 | TTCCTGAAGGAGAGCGCCGTGTAGAATTTATAAATTCTATCAT |
MX000045 | CodY | strain | - | 1850 | 1914 | 4.02e-07 | 0.00314 | TTTTTATTTTTTAAACCAGCCAATAGATGCATCATGAATACTGTCTATATCTGTTGAATAAGGCT |
MX000154 | OxyR | strain | + | 18276 | 18309 | 4.38e-07 | 0.00611 | ATATTGCTATTATTAATATGATAGATATGTATAA |
MX000016 | Fur | strain | - | 19610 | 19632 | 4.42e-07 | 0.0122 | AATTATCCGGTACTACTAAAAAT |
MX000076 | SigH | strain | + | 3380 | 3391 | 4.51e-07 | 0.0163 | GAAGGATTTAAA |
MX000009 | ResD | strain | - | 19104 | 19124 | 4.56e-07 | 0.0129 | TAATTCTTTCATTTTTTTAAA |
MX000073 | SigB | strain | + | 17432 | 17463 | 4.89e-07 | 0.0173 | AAAGTTTCATTTAATGCAATAACAGGAAAAGA |
MX000069 | SigE | strain | + | 2129 | 2164 | 6.09e-07 | 0.0197 | TTTGTCATAAATATACCAACAGCTGATATGATAGAA |
MX000123 | DeoR | strain | + | 19835 | 19850 | 6.8e-07 | 0.0238 | TGTTATAATAGTAACA |
MX000074 | SigB | strain | + | 17244 | 17274 | 7.25e-07 | 0.0143 | GCCTTTATTTTTTTTAAAATTGTGGTAGAAT |
MX000188 | SarA | strain | + | 18340 | 18355 | 7.83e-07 | 0.00547 | AAATTTAATTTTAAAT |
MX000071 | SigB | strain | + | 16602 | 16613 | 7.93e-07 | 0.0175 | AAGGGAAAAAAA |
MX000080 | SigW | strain | + | 3857 | 3868 | 8.02e-07 | 0.0263 | ATATGAAACATT |
MX000044 | CitT | strain | + | 8449 | 8473 | 8.25e-07 | 0.031 | CGATAAAAAAGAAACGGCTTGTAAA |
MX000020 | AraR | strain | - | 9634 | 9649 | 8.46e-07 | 0.0264 | ATTTGTACGTTTTATT |
MX000074 | SigB | strain | + | 9978 | 10008 | 8.51e-07 | 0.0143 | CCTTTTTAGCTCATCTTATTGAGGGTATAGA |
MX000094 | CysB | strain | - | 16868 | 16898 | 8.51e-07 | 0.0244 | CTTGCGTTTTTAATAACCTCTAACCCTTTAT |
MX000071 | SigB | strain | + | 19276 | 19287 | 8.76e-07 | 0.0175 | AGGGGAATTAAA |
MX000045 | CodY | strain | + | 2707 | 2771 | 9.5e-07 | 0.00486 | TTATGCTATTATATTTTAAAAGATAGTATCAATATATTATCTGAAAATAAATTTTACGGAGGGAT |
MX000072 | SigB | strain | + | 19028 | 19060 | 9.7e-07 | 0.0272 | AAGGTTTAAAAATATAAGAATAAAAGGATTAAT |
MX000128 | Fur | strain | - | 2360 | 2378 | 9.9e-07 | 0.0287 | TAAAATAAGAATCATTTTC |
MX000188 | SarA | strain | - | 6993 | 7008 | 1e-06 | 0.00547 | ATTTATATTTTTTAGT |
MX000188 | SarA | strain | + | 12770 | 12785 | 1.03e-06 | 0.00547 | ATTTATATTATTAATA |
MX000057 | PhoP | strain | + | 6224 | 6254 | 1.05e-06 | 0.0116 | TTTTTTAAACCATTTAGTACTTAAAGAAGGA |
MX000134 | IciA | strain | + | 12268 | 12279 | 1.1e-06 | 0.0396 | AGATAATTTAAA |
MX000188 | SarA | strain | - | 17177 | 17192 | 1.11e-06 | 0.00547 | ATATATAATATTAATT |
MX000045 | CodY | strain | - | 18122 | 18186 | 1.14e-06 | 0.00486 | TCTTTTATTAATTTATAATCATCTTTATTTATCGGAATAGCTAAATACCATTTTGAATTATCTAT |
MX000013 | Fur | strain | - | 2360 | 2378 | 1.17e-06 | 0.0266 | TAAAATAAGAATCATTTTC |
MX000184 | YiaJ | strain | + | 5784 | 5818 | 1.17e-06 | 0.0375 | ATTAAAAAGAGATTTAAATTTAAAAAATAAAAATT |
MX000126 | FlhD2C2 | strain | - | 20958 | 20974 | 1.18e-06 | 0.0496 | CTAACCGGAAGATTCGC |
MX000016 | Fur | strain | - | 20792 | 20814 | 1.22e-06 | 0.0152 | AATTATACAATAATTAACAAAAT |
MX000186 | AlgZ | strain | - | 72 | 85 | 1.25e-06 | 0.0524 | TGCCATAACCCCCG |
MX000165 | MarA | strain | - | 12704 | 12723 | 1.25e-06 | 0.0411 | ATAGCACTATCTCTTAATTT |
MX000057 | PhoP | strain | - | 18153 | 18183 | 1.35e-06 | 0.0116 | TTTATTAATTTATAATCATCTTTATTTATCG |
MX000050 | Hpr | strain | + | 1224 | 1242 | 1.38e-06 | 0.0374 | TTAATTATTATACTACAAA |
MX000045 | CodY | strain | - | 17369 | 17433 | 1.39e-06 | 0.00486 | TTTCCTATATACAATATAACAGCTATTATTAATAAAATTTTGAATATATTTTTTCCCATATAATA |
MX000080 | SigW | strain | - | 17432 | 17443 | 1.4e-06 | 0.0263 | AAATGAAACTTT |
MX000176 | YdiH | strain | + | 18039 | 18060 | 1.43e-06 | 0.0477 | CTTCTGAAATGTTGAGTAAAAT |
MX000103 | ExsA | strain | + | 17807 | 17845 | 1.44e-06 | 0.0579 | GCAGATGAACTTAAAAAGCAAATCGAAGATTTGAAGAAC |
MX000209 | NtcA | strain | + | 8228 | 8241 | 1.45e-06 | 0.0511 | GTAAATAACAATAC |
MX000045 | CodY | strain | - | 5778 | 5842 | 1.45e-06 | 0.00486 | TTTGGCATTTTTATAACCTCCTATAATTTTTATTTTTTAAATTTAAATCTCTTTTTAATATTTTA |
MX000023 | ComK | strain | - | 20936 | 20948 | 1.47e-06 | 0.0455 | AAAATCAGTTTTT |
MX000039 | RofA | strain | - | 20502 | 20518 | 1.5e-06 | 0.0329 | TTCTTCAAAAAATTCAT |
MX000013 | Fur | strain | + | 2360 | 2378 | 1.62e-06 | 0.0266 | GAAAATGATTCTTATTTTA |
MX000048 | GltC | strain | + | 2507 | 2521 | 1.66e-06 | 0.0486 | ATTTAATAAATATAT |
MX000057 | PhoP | strain | + | 1981 | 2011 | 1.67e-06 | 0.0116 | TGTATTAATTTCTACAATAGATAAAAAAGGA |
MX000025 | DinR/LexA | strain | - | 7459 | 7472 | 1.72e-06 | 0.0668 | CGAACCTTTGTTTC |
MX000056 | MtrB | strain | - | 16401 | 16456 | 1.77e-06 | 0.0611 | CTGACCTATTATTAATCCTTGTAAGGCTCCTTCTTCCAGATCCTTTTCTCCTTAAA |
MX000053 | LicT | strain | - | 11229 | 11257 | 1.81e-06 | 0.0757 | GCGGTTTTCTTCATTGAGAATAAAAGTCC |
MX000041 | CovR | strain | - | 19100 | 19115 | 1.82e-06 | 0.0182 | CATTTTTTTAAAATAA |
MX000045 | CodY | strain | + | 2367 | 2431 | 1.82e-06 | 0.00534 | ATTCTTATTTTAATAATAAAGGAGAATTTGATTATGAAAAAGCAAAGCCATTATTAATTTATAAG |
MX000064 | SigB | strain | - | 14233 | 14244 | 1.9e-06 | 0.0225 | AATGTTTTACTT |
MX000057 | PhoP | strain | + | 2711 | 2741 | 1.91e-06 | 0.0116 | GCTATTATATTTTAAAAGATAGTATCAATAT |
MX000039 | RofA | strain | - | 20876 | 20892 | 1.92e-06 | 0.0329 | TTTTTAAAAAAAATAAA |
MX000064 | SigB | strain | + | 1280 | 1291 | 2.02e-06 | 0.0225 | AAGGTTTTATAT |
MX000064 | SigB | strain | + | 3771 | 3782 | 2.02e-06 | 0.0225 | AAGGTTTTATAT |
MX000188 | SarA | strain | + | 2500 | 2515 | 2.07e-06 | 0.00851 | AAATATAATTTAATAA |
MX000073 | SigB | strain | + | 20872 | 20903 | 2.11e-06 | 0.0373 | AAGTTTTATTTTTTTTAAAAAATAGGAGGTAA |
MX000011 | RhlR | strain | - | 2925 | 2940 | 2.16e-06 | 0.0905 | CTGCAAGGTCTGTAAC |
MX000090 | Zur | strain | + | 4010 | 4028 | 2.25e-06 | 0.0748 | AAATTTTTATAATTTTATT |
MX000155 | OxyR | strain | - | 7120 | 7165 | 2.3e-06 | 0.0734 | ACGATATTAAGCAGCAATATTTCCTTGAGGCTTCATTCATTTTCAT |
MX000185 | XylR | strain | + | 17994 | 18026 | 2.31e-06 | 0.0393 | ATAAATATGAAAATCAATTAGACACAAAAAAAA |
MX000016 | Fur | strain | - | 17250 | 17272 | 2.36e-06 | 0.0152 | TCTACCACAATTTTAAAAAAAAT |
MX000181 | Crp | strain | - | 7959 | 7980 | 2.43e-06 | 0.0544 | TGTGTTATATAGCTATAACATT |
MX000045 | CodY | strain | + | 6694 | 6758 | 2.46e-06 | 0.00557 | AATTCTTCATTTAATATGAGGAAAAAAATTCGCACTGAAAAAGAAGATATTGAATTTTGGAATAA |
MX000045 | CodY | strain | - | 18324 | 18388 | 2.46e-06 | 0.00557 | AGATGATTTTGGAACTTCATAACCTGTATAATCATTTAAAATTAAATTTACTTTTACCTTCCGTA |
MX000188 | SarA | strain | - | 13007 | 13022 | 2.51e-06 | 0.00883 | AAATATTAATTTTATA |
MX000114 | Ada | strain | + | 8142 | 8159 | 2.51e-06 | 0.0542 | ATAAAAATTATAGAGAAA |
MX000031 | PhoP | strain | + | 3695 | 3711 | 2.6e-06 | 0.092 | TGTTTATGGATTGTTGC |
MX000205 | CmeR | strain | + | 2328 | 2339 | 2.69e-06 | 0.0857 | CTTTAATTATAA |
MX000141 | OmpR | strain | - | 11683 | 11692 | 2.69e-06 | 0.0938 | TGAAACATCT |
MX000080 | SigW | strain | + | 13517 | 13528 | 2.7e-06 | 0.0337 | GAATGAAACATT |
MX000045 | CodY | strain | - | 5777 | 5841 | 2.72e-06 | 0.00557 | TTGGCATTTTTATAACCTCCTATAATTTTTATTTTTTAAATTTAAATCTCTTTTTAATATTTTAT |
MX000135 | YhiX | strain | + | 18833 | 18850 | 2.79e-06 | 0.036 | TAAGGTTAAATATATTAT |
MX000135 | YhiX | strain | - | 19481 | 19498 | 2.79e-06 | 0.036 | ACCGGCTTTTTATTTTTT |
MX000188 | SarA | strain | - | 5802 | 5817 | 2.88e-06 | 0.00888 | ATTTTTATTTTTTAAA |
MX000185 | XylR | strain | - | 2678 | 2710 | 2.88e-06 | 0.0393 | ATAAATTAAAAATTAAATCAATAGTATACAAAT |
MX000038 | CovR | strain | - | 10156 | 10166 | 2.88e-06 | 0.0402 | TTCCATTAAAA |
MX000082 | SigW | strain | + | 19973 | 20005 | 2.9e-06 | 0.095 | TGTAAAACTTGTGTTAATGTTTATGGGTTAACT |
MX000045 | CodY | strain | - | 2500 | 2564 | 2.98e-06 | 0.00557 | TTTTAGTTAGCAATAATTAAAGTTGATTCAATAATTATAAGCGATATATTTATTAAATTATATTT |
MX000057 | PhoP | strain | - | 18373 | 18403 | 3e-06 | 0.0146 | TTTATTATTTATAACAGATGATTTTGGAACT |
MX000030 | DegU | strain | - | 11349 | 11367 | 3.04e-06 | 0.112 | AGACCTTCAAGCACTTCAG |
MX000045 | CodY | strain | - | 14161 | 14225 | 3.09e-06 | 0.00557 | TTCATTTCACCTCAAATAACCTTTTTTATTCTGATAGAACATACCAATCATAATCATTGATAGAG |
MX000016 | Fur | strain | + | 1340 | 1362 | 3.13e-06 | 0.0152 | TATAAGATGCTTTTAAAGAAACC |
MX000066 | SigE | strain | + | 4788 | 4798 | 3.21e-06 | 0.105 | AGGCATAATTG |
MX000016 | Fur | strain | + | 789 | 811 | 3.31e-06 | 0.0152 | AGTTATCCACATTTGATAAAAAT |
MX000016 | Fur | strain | + | 18999 | 19021 | 3.31e-06 | 0.0152 | GATACGATTGATTTTATTAAAAT |
MX000045 | CodY | strain | - | 2501 | 2565 | 3.36e-06 | 0.00563 | ATTTTAGTTAGCAATAATTAAAGTTGATTCAATAATTATAAGCGATATATTTATTAAATTATATT |
MX000188 | SarA | strain | + | 17746 | 17761 | 3.4e-06 | 0.0093 | AAATTTAATTAAAAAA |
MX000089 | XylR | strain | + | 12153 | 12175 | 3.51e-06 | 0.0702 | GTTTGAATAATAAACAAAATATC |
MX000076 | SigH | strain | - | 9680 | 9691 | 3.54e-06 | 0.0642 | AAAGGAATTATG |
MX000070 | SigE | strain | - | 9248 | 9284 | 3.55e-06 | 0.125 | TAGCTATATATTGATGAGGAGGTGGAATATCAGGGTC |
MX000149 | Nac | strain | + | 12994 | 13004 | 3.59e-06 | 0.111 | ATCAAAAAATC |
MX000078 | SigL | strain | + | 12158 | 12210 | 3.65e-06 | 0.104 | AATAATAAACAAAATATCGGAAAATGGCAAACACCTACTATTGAAAAAATCAT |
MX000181 | Crp | strain | - | 14464 | 14485 | 3.67e-06 | 0.0544 | GTTCTGATAAAGTTTTATCAAT |
MX000200 | MelR | strain | - | 10150 | 10167 | 3.8e-06 | 0.0786 | TTTCCATTAAAACCGGAT |
MX000041 | CovR | strain | + | 20880 | 20895 | 3.83e-06 | 0.0287 | TTTTTTTTAAAAAATA |
MX000049 | GltR | strain | + | 5990 | 6004 | 3.83e-06 | 0.119 | ATCTCAAAGTCTGAT |
MX000109 | TrpI | strain | - | 11500 | 11522 | 3.93e-06 | 0.152 | TTCCCCAAGCTTTGCTTTTACTT |
MX000088 | Xre | strain | + | 2652 | 2674 | 3.98e-06 | 0.0796 | TATTAAAAATAATTTGTATCATA |
MX000091 | ArcA | strain | + | 20796 | 20805 | 4e-06 | 0.123 | TGTTAATTAT |
MX000154 | OxyR | strain | + | 14158 | 14191 | 4.07e-06 | 0.0366 | TTGCTCTATCAATGATTATGATTGGTATGTTCTA |
MX000016 | Fur | strain | + | 19920 | 19942 | 4.25e-06 | 0.0168 | TTTTCGCCGATTTTAGCAATAAT |
MX000089 | XylR | strain | - | 12149 | 12171 | 4.28e-06 | 0.0702 | TTTTGTTTATTATTCAAACCAAT |
MX000135 | YhiX | strain | + | 3590 | 3607 | 4.31e-06 | 0.037 | TCCTGATATTATTTTTAT |
MX000092 | CaiF | strain | + | 15487 | 15532 | 4.33e-06 | 0.0992 | TACCATTGATATAGAAAAGGCAATAAAAAAAGGAGAAAAATCCTTT |
MX000188 | SarA | strain | + | 17395 | 17410 | 4.5e-06 | 0.0111 | AATTTTATTAATAATA |
MX000150 | NagC | strain | - | 20562 | 20584 | 4.7e-06 | 0.0869 | GTTTTTCTATTTTTCACAAGAAT |
MX000038 | CovR | strain | + | 17749 | 17759 | 4.77e-06 | 0.0402 | TTTAATTAAAA |
MX000038 | CovR | strain | + | 19010 | 19020 | 4.77e-06 | 0.0402 | TTTTATTAAAA |
MX000038 | CovR | strain | - | 19373 | 19383 | 4.77e-06 | 0.0402 | TTTTATTAAAA |
MX000041 | CovR | strain | + | 20877 | 20892 | 4.84e-06 | 0.029 | TTATTTTTTTTAAAAA |
MX000011 | RhlR | strain | - | 6366 | 6381 | 4.91e-06 | 0.103 | CTGCCTTTTCTGCCAG |
MX000098 | DnaA | strain | + | 791 | 799 | 4.91e-06 | 0.202 | TTATCCACA |
MX000185 | XylR | strain | + | 17653 | 17685 | 4.91e-06 | 0.0393 | ATTAAAAGAATTAGATGATATAAATAAAAAAAT |
MX000019 | Spo0A | strain | - | 3201 | 3212 | 4.95e-06 | 0.191 | TTTGTCGGAAAA |
MX000044 | CitT | strain | + | 17563 | 17587 | 5.07e-06 | 0.0951 | TGAAATAAAGAAAATGGTTTTAAGC |
MX000045 | CodY | strain | + | 2481 | 2545 | 5.07e-06 | 0.00745 | TATAATTCAATTAAGTTAAAAATATAATTTAATAAATATATCGCTTATAATTATTGAATCAACTT |
MX000045 | CodY | strain | + | 17337 | 17401 | 5.09e-06 | 0.00745 | ATCTTTTATATAGAATATAAACTTAGGTGGATTATTATATGGGAAAAAATATATTCAAAATTTTA |
MX000067 | SigE | strain | - | 4054 | 4065 | 5.1e-06 | 0.154 | TGCATATACTGA |
MX000029 | Fis | strain | + | 20276 | 20290 | 5.17e-06 | 0.201 | GCTCAAAATACAGCC |
MX000198 | YrzC | strain | - | 13003 | 13026 | 5.21e-06 | 0.0696 | AAACAAATATTAATTTTATACTGA |
MX000154 | OxyR | strain | + | 2531 | 2564 | 5.24e-06 | 0.0366 | TTATTGAATCAACTTTAATTATTGCTAACTAAAA |
MX000083 | SigX | strain | + | 17531 | 17542 | 5.24e-06 | 0.0842 | AATGAAACGATT |
MX000099 | PhoB | strain | + | 2131 | 2146 | 5.27e-06 | 0.11 | TGTCATAAATATACCA |
MX000119 | CpxR | strain | + | 15885 | 15900 | 5.37e-06 | 0.213 | GGCAAAAGATTGTAAA |
MX000043 | AhrC | strain | - | 19374 | 19389 | 5.39e-06 | 0.0543 | TAGTTTTTTTATTAAA |
MX000062 | RocR | strain | - | 10040 | 10060 | 5.39e-06 | 0.188 | TTCACAAATAAATTTTTCTTT |
MX000028 | IHF | strain | + | 2732 | 2745 | 5.44e-06 | 0.104 | GTATCAATATATTA |
MX000088 | Xre | strain | + | 15148 | 15170 | 5.51e-06 | 0.0796 | GAATTTATATAATATGTATTATC |
MX000039 | RofA | strain | - | 12610 | 12626 | 5.54e-06 | 0.0523 | TTTTATCTAAAATCCAT |
MX000188 | SarA | strain | + | 14142 | 14157 | 5.56e-06 | 0.0125 | AATTATATATATTTAT |
MX000180 | HydG | strain | - | 20490 | 20545 | 5.71e-06 | 0.217 | CTATTCTCTTTCATGTGATTCCCCTTCTTCTTCAAAAAATTCATTTTCATCTATTG |
MX000057 | PhoP | strain | + | 1441 | 1471 | 5.75e-06 | 0.0198 | TGTTATTATTTTACTATATTATATTACATGT |
MX000151 | NhaR | strain | - | 11732 | 11742 | 5.78e-06 | 0.208 | TCGGAAAAAAG |
MX000184 | YiaJ | strain | + | 20417 | 20451 | 5.81e-06 | 0.0928 | TTAAAAAAGAAATTGAATATTTTCAAAGCAAAATT |
MX000009 | ResD | strain | + | 20792 | 20812 | 5.81e-06 | 0.0543 | ATTTTGTTAATTATTGTATAA |
MX000134 | IciA | strain | + | 18124 | 18135 | 5.81e-06 | 0.105 | AGATAATTCAAA |
MX000031 | PhoP | strain | + | 4641 | 4657 | 5.87e-06 | 0.104 | TGTTTATTTCATGTTTA |
MX000198 | YrzC | strain | - | 2684 | 2707 | 5.88e-06 | 0.0696 | AATTAAAAATTAAATCAATAGTAT |
MX000099 | PhoB | strain | + | 5600 | 5615 | 5.9e-06 | 0.11 | TGACCTTAATCTGTCA |
MX000046 | ComA | strain | - | 9177 | 9196 | 5.92e-06 | 0.249 | TTTTGGCTGCACGCAAACAT |
MX000032 | PvdS | strain | - | 118 | 126 | 5.98e-06 | 0.119 | GGTAAATTT |
MX000032 | PvdS | strain | - | 619 | 627 | 5.98e-06 | 0.119 | GGTAAATTT |
MX000061 | PyrR | strain | + | 10602 | 10620 | 6.02e-06 | 0.232 | CTTTAAATGAGCCTGAAGA |
MX000050 | Hpr | strain | + | 1442 | 1460 | 6.04e-06 | 0.068 | GTTATTATTTTACTATATT |
MX000016 | Fur | strain | + | 2642 | 2664 | 6.06e-06 | 0.0186 | TGTTTTCAGGTATTAAAAATAAT |
MX000016 | Fur | strain | + | 2497 | 2519 | 6.06e-06 | 0.0186 | TAAAAATATAATTTAATAAATAT |
MX000039 | RofA | strain | - | 6743 | 6759 | 6.09e-06 | 0.0523 | TTTATTCCAAAATTCAA |
MX000185 | XylR | strain | + | 18074 | 18106 | 6.1e-06 | 0.0393 | ATTGAAAAAAATGGCAATTTAAAGCAAAATAAC |
MX000043 | AhrC | strain | - | 18517 | 18532 | 6.13e-06 | 0.0543 | ATACATTTTTATCCCT |
MX000060 | PrfA | strain | + | 3621 | 3634 | 6.15e-06 | 0.199 | TTACCATTAGTTAA |
MX000200 | MelR | strain | + | 15963 | 15980 | 6.17e-06 | 0.0786 | TTTCCCTTGATATGGGAG |
MX000190 | FNRL | strain | + | 16712 | 16725 | 6.24e-06 | 0.147 | TAGATGCATATCAA |
MX000116 | ArgR | strain | - | 7527 | 7540 | 6.27e-06 | 0.117 | TGAATTTTATTTCA |
MX000114 | Ada | strain | + | 17912 | 17929 | 6.31e-06 | 0.0542 | AAAACACTTTTAGAGCAA |
MX000144 | MarR | strain | + | 13022 | 13044 | 6.37e-06 | 0.204 | TGTTTTTGTTCTTGCAAGTATAA |
MX000200 | MelR | strain | - | 2866 | 2883 | 6.41e-06 | 0.0786 | TTTCCTGTTTTTGCTGAA |
MX000188 | SarA | strain | - | 5800 | 5815 | 6.65e-06 | 0.0125 | TTTTATTTTTTAAATT |
MX000012 | LasR | strain | - | 3538 | 3553 | 6.76e-06 | 0.134 | CTACCATTTTTACCAG |
MX000057 | PhoP | strain | + | 19726 | 19756 | 6.79e-06 | 0.0198 | TATTAACTACACTAAATTACTTTTTTGAAGT |
MX000198 | YrzC | strain | - | 2673 | 2696 | 6.8e-06 | 0.0696 | AAATCAATAGTATACAAATAATTA |
MX000107 | OxyR | strain | + | 1256 | 1292 | 6.94e-06 | 0.125 | ATTGCTGATGCTTATTGGACAGGTAAGGTTTTATATC |
MX000107 | OxyR | strain | + | 5409 | 5445 | 6.94e-06 | 0.125 | CGATATTTAGATGAATTAAGCGGTGGGGAACTGCAAA |
MX000028 | IHF | strain | + | 6586 | 6599 | 6.96e-06 | 0.104 | TAATCAATGGATTA |
MX000205 | CmeR | strain | - | 2377 | 2388 | 6.97e-06 | 0.105 | CCTTTATTATTA |
MX000071 | SigB | strain | + | 11516 | 11527 | 7e-06 | 0.0933 | TGGGGAATAAAA |
MX000174 | SoxS | strain | - | 12704 | 12723 | 7.16e-06 | 0.265 | ATAGCACTATCTCTTAATTT |
MX000188 | SarA | strain | + | 15119 | 15134 | 7.17e-06 | 0.0125 | AAAAATATTTATAATA |
MX000041 | CovR | strain | - | 12892 | 12907 | 7.17e-06 | 0.033 | CCATTTTTCAAAATAC |
MX000020 | AraR | strain | + | 6518 | 6533 | 7.18e-06 | 0.112 | AATAGCCCGTACAAAT |
MX000123 | DeoR | strain | + | 12985 | 13000 | 7.19e-06 | 0.0433 | TGTTAAAATATCAAAA |
MX000004 | Fnr | strain | + | 17991 | 18004 | 7.22e-06 | 0.143 | TTGATAAATATGAA |
MX000083 | SigX | strain | + | 13518 | 13529 | 7.23e-06 | 0.0842 | AATGAAACATTA |
MX000185 | XylR | strain | - | 5353 | 5385 | 7.27e-06 | 0.0393 | ATTTTTCTAAAACCCTGTTTACTATATCCATAT |
MX000114 | Ada | strain | + | 5443 | 5460 | 7.39e-06 | 0.0542 | AAAAGGTTGTTATAGCAA |
MX000116 | ArgR | strain | + | 19396 | 19409 | 7.4e-06 | 0.117 | TGAATATACATACA |
MX000114 | Ada | strain | + | 16580 | 16597 | 7.46e-06 | 0.0542 | ACAAGGATATAAGAGAAA |
MX000123 | DeoR | strain | - | 2810 | 2825 | 7.54e-06 | 0.0433 | TGTAAGCAATGCAACA |
MX000154 | OxyR | strain | - | 18591 | 18624 | 7.54e-06 | 0.0367 | TATTTTTTTTTATATCTTCTATATTTTCTAATAT |
MX000140 | LexA | strain | + | 17784 | 17799 | 7.56e-06 | 0.26 | CTGTTAAAAATAACAG |
MX000190 | FNRL | strain | - | 5151 | 5164 | 7.56e-06 | 0.147 | TTGATGCATTTTAA |
MX000081 | SigW | strain | - | 19228 | 19237 | 7.62e-06 | 0.29 | ATACGTATAA |
MX000175 | SdiA | strain | - | 18269 | 18298 | 7.65e-06 | 0.204 | TATCATATTAATAATAGCAATATATGCTTT |
MX000188 | SarA | strain | - | 17395 | 17410 | 7.67e-06 | 0.0125 | TATTATTAATAAAATT |
MX000123 | DeoR | strain | + | 14466 | 14481 | 7.82e-06 | 0.0433 | TGATAAAACTTTATCA |
MX000125 | FruR | strain | + | 17137 | 17150 | 7.85e-06 | 0.324 | GCTGAAACCATAAT |
MX000057 | PhoP | strain | - | 2717 | 2747 | 7.99e-06 | 0.0198 | GATAATATATTGATACTATCTTTTAAAATAT |
MX000043 | AhrC | strain | + | 7246 | 7261 | 8.01e-06 | 0.0543 | ATGATTATTTATCCAT |
MX000123 | DeoR | strain | + | 2167 | 2182 | 8.02e-06 | 0.0433 | TGTTAAAATATCATCT |
MX000123 | DeoR | strain | - | 20053 | 20068 | 8.02e-06 | 0.0433 | TGTTAACATTTTATCC |
MX000016 | Fur | strain | + | 17661 | 17683 | 8.06e-06 | 0.0223 | AATTAGATGATATAAATAAAAAA |
MX000188 | SarA | strain | - | 4008 | 4023 | 8.14e-06 | 0.0125 | AATTATAAAAATTTTT |
MX000188 | SarA | strain | - | 15119 | 15134 | 8.14e-06 | 0.0125 | TATTATAAATATTTTT |
MX000050 | Hpr | strain | - | 6998 | 7016 | 8.17e-06 | 0.068 | TTCAATATATTTATATTTT |
MX000041 | CovR | strain | + | 2324 | 2339 | 8.18e-06 | 0.033 | TATTCTTTAATTATAA |
MX000057 | PhoP | strain | - | 17325 | 17355 | 8.34e-06 | 0.0198 | TATATTCTATATAAAAGATGATTTTCCTTCT |
MX000148 | ModE | strain | - | 2465 | 2487 | 8.34e-06 | 0.272 | AATTATATACTTAAATTCATTAC |
MX000150 | NagC | strain | - | 17985 | 18007 | 8.37e-06 | 0.0869 | ATTTTCATATTTATCAAAGTAAA |
MX000004 | Fnr | strain | + | 3556 | 3569 | 8.4e-06 | 0.143 | TTGATATAGATAAA |
MX000154 | OxyR | strain | - | 1257 | 1290 | 8.61e-06 | 0.0367 | TATAAAACCTTACCTGTCCAATAAGCATCAGCAA |
MX000045 | CodY | strain | - | 6679 | 6743 | 8.63e-06 | 0.0117 | ATATCTTCTTTTTCAGTGCGAATTTTTTTCCTCATATTAAATGAAGAATTCTTGGCATCTTCCCA |
MX000123 | DeoR | strain | - | 14466 | 14481 | 8.66e-06 | 0.0433 | TGATAAAGTTTTATCA |
MX000005 | Fnr | strain | - | 8122 | 8137 | 8.75e-06 | 0.166 | TGAGAAGTACTCCACA |
MX000069 | SigE | strain | + | 7574 | 7609 | 8.82e-06 | 0.143 | ATTATCAATGATATAGCACAAGCTGATATTCTTAAG |
MX000199 | CovR | strain | + | 2372 | 2380 | 8.86e-06 | 0.0724 | TATTTTAAT |
MX000199 | CovR | strain | - | 6596 | 6604 | 8.86e-06 | 0.0724 | TATTTTAAT |
MX000199 | CovR | strain | - | 20007 | 20015 | 8.86e-06 | 0.0724 | TATTTTAAT |
MX000074 | SigB | strain | + | 6690 | 6720 | 8.9e-06 | 0.1 | CAAGAATTCTTCATTTAATATGAGGAAAAAA |
MX000082 | SigW | strain | + | 4005 | 4037 | 8.94e-06 | 0.14 | AAGAAAAATTTTTATAATTTTATTGTGTGCACT |
MX000039 | RofA | strain | - | 19244 | 19260 | 8.98e-06 | 0.0616 | TTTTCCCAAAAATACCT |
MX000096 | Lrp | strain | + | 11228 | 11241 | 9.03e-06 | 0.179 | AGGACTTTTATTCT |
MX000045 | CodY | strain | - | 666 | 730 | 9.05e-06 | 0.0117 | ATTTTTATCTGTTAAATATGCAACAAAAATTACATCAGGTTTAACATCAATAATTTGTTCGGCAT |
MX000114 | Ada | strain | - | 7809 | 7826 | 9.06e-06 | 0.0542 | AAAAGAATATAAGATCAG |
MX000154 | OxyR | strain | + | 1977 | 2010 | 9.19e-06 | 0.0367 | CAGTTGTATTAATTTCTACAATAGATAAAAAAGG |
MX000041 | CovR | strain | - | 17396 | 17411 | 9.24e-06 | 0.033 | CTATTATTAATAAAAT |
MX000057 | PhoP | strain | - | 5763 | 5793 | 9.28e-06 | 0.0198 | TCTTTTTAATATTTTATATCGCTTATAACGG |
MX000023 | ComK | strain | + | 20936 | 20948 | 9.34e-06 | 0.103 | AAAAACTGATTTT |
MX000005 | Fnr | strain | + | 8122 | 8137 | 9.35e-06 | 0.166 | TGTGGAGTACTTCTCA |
MX000090 | Zur | strain | - | 2358 | 2376 | 9.44e-06 | 0.157 | AAATAAGAATCATTTTCTT |
MX000073 | SigB | strain | + | 19028 | 19059 | 9.44e-06 | 0.0728 | AAGGTTTAAAAATATAAGAATAAAAGGATTAA |
MX000016 | Fur | strain | - | 17637 | 17659 | 9.44e-06 | 0.0235 | TTTTAATTTATTTTTATCCAAGT |
MX000045 | CodY | strain | - | 7595 | 7659 | 9.46e-06 | 0.0117 | ACTTTTTTCATTAATTTCCCCCCTATTTTAAGATTATTAGTAAAAACAAACTTAAGAATATCAGC |
MX000073 | SigB | strain | + | 20875 | 20906 | 9.5e-06 | 0.0728 | TTTTATTTTTTTTAAAAAATAGGAGGTAAAAG |
MX000043 | AhrC | strain | - | 18165 | 18180 | 9.73e-06 | 0.0543 | ATTAATTTATAATCAT |
MX000205 | CmeR | strain | + | 13342 | 13353 | 9.83e-06 | 0.105 | CTTTTATTATAA |
MX000167 | DegU | strain | - | 19357 | 19376 | 9.91e-06 | 0.317 | AAAAGGAATGACTCTTTCAG |
MX000188 | SarA | strain | - | 2506 | 2521 | 9.92e-06 | 0.0144 | ATATATTTATTAAATT |
MX000181 | Crp | strain | - | 19833 | 19854 | 9.97e-06 | 0.0985 | GTTCTGTTACTATTATAACAAA |
MX000185 | XylR | strain | - | 14142 | 14174 | 1e-05 | 0.0393 | AATCATTGATAGAGCAAATAAATATATATAATT |
MX000008 | GlpR | strain | + | 10628 | 10647 | 1e-05 | 0.384 | TTTGTTCGAAAACATACCCT |
MX000168 | DegU | strain | + | 5995 | 6015 | 1e-05 | 0.216 | AAAGTCTGATGGATTATTTAG |
MX000136 | IlvY | strain | - | 18270 | 18296 | 1e-05 | 0.168 | TCATATTAATAATAGCAATATATGCTT |
MX000023 | ComK | strain | - | 17331 | 17343 | 1e-05 | 0.103 | AAAAGATGATTTT |
MX000048 | GltC | strain | + | 19826 | 19840 | 1.01e-05 | 0.106 | TTCTAAATTTGTTAT |
MX000049 | GltR | strain | + | 2588 | 2602 | 1.01e-05 | 0.119 | ATTCTAAAATAAGAA |
MX000014 | OmpR | strain | + | 2673 | 2699 | 1.01e-05 | 0.154 | TAATTATTTGTATACTATTGATTTAAT |
MX000041 | CovR | strain | - | 5638 | 5653 | 1.01e-05 | 0.033 | TTATCTTTTAAAAGCA |
MX000030 | DegU | strain | - | 10128 | 10146 | 1.02e-05 | 0.186 | AGAGCATCTATCTCTTTTG |
MX000016 | Fur | strain | + | 18101 | 18123 | 1.02e-05 | 0.0235 | AATAACATGCTTGTTAAAATAAT |
MX000044 | CitT | strain | + | 16312 | 16336 | 1.02e-05 | 0.12 | GAAAGAGAAAATAGCGGTTCTCAGG |
MX000073 | SigB | strain | + | 6591 | 6622 | 1.03e-05 | 0.0728 | AATGGATTAAAATAATAAAAAGGTGGTATATA |
MX000043 | AhrC | strain | - | 8138 | 8153 | 1.04e-05 | 0.0543 | TATAATTTTTATACCA |
MX000176 | YdiH | strain | + | 2679 | 2700 | 1.04e-05 | 0.173 | TTTGTATACTATTGATTTAATT |
MX000057 | PhoP | strain | - | 5780 | 5810 | 1.04e-05 | 0.0198 | TTTTTTAAATTTAAATCTCTTTTTAATATTT |
MX000056 | MtrB | strain | - | 20511 | 20566 | 1.04e-05 | 0.0889 | AGAATACCAACAACAGCAAGTCTATTCTCTTTCATGTGATTCCCCTTCTTCTTCAA |
MX000116 | ArgR | strain | + | 7527 | 7540 | 1.05e-05 | 0.117 | TGAAATAAAATTCA |
MX000013 | Fur | strain | + | 17699 | 17717 | 1.07e-05 | 0.117 | AATAATGCTTCTAATAATC |
MX000049 | GltR | strain | - | 5705 | 5719 | 1.08e-05 | 0.119 | ATCCCATAAACAGAT |
MX000185 | XylR | strain | + | 5785 | 5817 | 1.08e-05 | 0.0393 | TTAAAAAGAGATTTAAATTTAAAAAATAAAAAT |
MX000067 | SigE | strain | + | 5192 | 5203 | 1.09e-05 | 0.154 | AGCATACATTGA |
MX000009 | ResD | strain | - | 3365 | 3385 | 1.09e-05 | 0.0543 | TCCTTCTGACAATTTTTTATA |
MX000041 | CovR | strain | - | 18420 | 18435 | 1.1e-05 | 0.033 | ATATTATTTAAAATAA |
MX000001 | MexR | strain | - | 18849 | 18863 | 1.1e-05 | 0.45 | TTTGACCTTATCAAT |
MX000185 | XylR | strain | + | 3946 | 3978 | 1.11e-05 | 0.0393 | AAAAAAGTGAAACAGCAAGCGATGGAAAACATT |
MX000045 | CodY | strain | - | 2665 | 2729 | 1.11e-05 | 0.0129 | TCTTTTAAAATATAATAGCATAAATTAAAAATTAAATCAATAGTATACAAATAATTATGATACAA |
MX000118 | CynR | strain | - | 8373 | 8426 | 1.11e-05 | 0.132 | AAAAGAAGGACATAAGCTTTATCATGGCATTAATTAGAGGTTTACCATCTTTCA |
MX000009 | ResD | strain | + | 14462 | 14482 | 1.12e-05 | 0.0543 | ATATTGATAAAACTTTATCAG |
MX000035 | AlgU | strain | + | 12817 | 12826 | 1.14e-05 | 0.264 | GGGAACTTTC |
MX000057 | PhoP | strain | - | 20017 | 20047 | 1.15e-05 | 0.0198 | TATCTTCATTTGTAAATTATTTAAGTATAAT |
MX000107 | OxyR | strain | - | 14121 | 14157 | 1.15e-05 | 0.137 | ATAAATATATATAATTGGCATTTTGTACGTCTTCCTT |
MX000128 | Fur | strain | + | 1328 | 1346 | 1.16e-05 | 0.106 | GCTAATGAAATTTATAAGA |
MX000188 | SarA | strain | - | 17249 | 17264 | 1.17e-05 | 0.0151 | AATTTTAAAAAAAATA |
MX000014 | OmpR | strain | + | 9047 | 9073 | 1.17e-05 | 0.154 | GAACCAATGGTTAAAAAGCGCATAACG |
MX000017 | CTSR | strain | + | 4352 | 4368 | 1.17e-05 | 0.173 | AGTCAATAATCATCAAT |
MX000135 | YhiX | strain | + | 17241 | 17258 | 1.18e-05 | 0.064 | AAAGCCTTTATTTTTTTT |
MX000198 | YrzC | strain | + | 12748 | 12771 | 1.18e-05 | 0.0712 | TAATGCCGGTAAAAATAAGAAGAT |
MX000057 | PhoP | strain | + | 20794 | 20824 | 1.18e-05 | 0.0198 | TTTGTTAATTATTGTATAATTATAAGAAAAC |
MX000057 | PhoP | strain | - | 19373 | 19403 | 1.18e-05 | 0.0198 | TATATTCACTATTTTAGTTTTTTTATTAAAA |
MX000149 | Nac | strain | + | 9731 | 9741 | 1.19e-05 | 0.183 | ATCAGAAATAC |
MX000118 | CynR | strain | + | 17994 | 18047 | 1.2e-05 | 0.132 | ATAAATATGAAAATCAATTAGACACAAAAAAAATGTATAATTTGACTTCTGAAA |
MX000089 | XylR | strain | + | 12149 | 12171 | 1.21e-05 | 0.1 | ATTGGTTTGAATAATAAACAAAA |
MX000166 | RcsB | strain | + | 13099 | 13113 | 1.21e-05 | 0.211 | ATGAATATACATCTG |
MX000166 | RcsB | strain | - | 16289 | 16303 | 1.21e-05 | 0.211 | CTAAAGATTCATCAG |
MX000175 | SdiA | strain | + | 20831 | 20860 | 1.21e-05 | 0.204 | AATTGCAATGATAGGGACAAAGACTTCTCG |
MX000114 | Ada | strain | + | 3946 | 3963 | 1.22e-05 | 0.0542 | AAAAAAGTGAAACAGCAA |
MX000056 | MtrB | strain | - | 14523 | 14578 | 1.22e-05 | 0.0889 | ATCGGTTTTTTCTAATACCTTTGTTGCCCTTATTTCCTCAGCTTCAATTAATTTTT |
MX000185 | XylR | strain | + | 18171 | 18203 | 1.23e-05 | 0.0393 | ATAAATTAATAAAAGAAGGAGAAAAAATAAAAG |
MX000057 | PhoP | strain | + | 2503 | 2533 | 1.23e-05 | 0.0198 | TATAATTTAATAAATATATCGCTTATAATTA |
MX000123 | DeoR | strain | + | 18478 | 18493 | 1.23e-05 | 0.054 | TGATAAAATAGCAATA |
MX000083 | SigX | strain | + | 8918 | 8929 | 1.24e-05 | 0.108 | ATTGAAACGATT |
MX000188 | SarA | strain | - | 5803 | 5818 | 1.24e-05 | 0.0151 | AATTTTTATTTTTTAA |
MX000011 | RhlR | strain | - | 12020 | 12035 | 1.25e-05 | 0.162 | CTGCAGGTACTGTTAC |
MX000105 | GlpR | strain | + | 19346 | 19365 | 1.25e-05 | 0.317 | AATTGACGAAACTGAAAGAG |
MX000128 | Fur | strain | - | 2822 | 2840 | 1.26e-05 | 0.106 | AGTAATGATAACAATTGTA |
MX000074 | SigB | strain | + | 8413 | 8443 | 1.27e-05 | 0.107 | TATGTCCTTCTTTTTAGAAAGTGGGAAAAAT |
MX000060 | PrfA | strain | - | 2820 | 2833 | 1.27e-05 | 0.205 | ATAACAATTGTAAG |
MX000071 | SigB | strain | + | 7638 | 7649 | 1.27e-05 | 0.103 | GGGGGAAATTAA |
MX000188 | SarA | strain | - | 5795 | 5810 | 1.27e-05 | 0.0151 | TTTTTTAAATTTAAAT |
MX000056 | MtrB | strain | - | 1892 | 1947 | 1.27e-05 | 0.0889 | GGCTCTATTACCATTTACAAAACCTCCTATAATTTTTTATTTTTTAAACCAGCCAA |
MX000111 | RpoN | strain | - | 388 | 433 | 1.28e-05 | 0.276 | AATCGTAACCGTCTTATTCTTTGGCGTTGAACTTGCTGATCTTTTT |
MX000160 | RcsA-RcsB | strain | + | 1153 | 1166 | 1.28e-05 | 0.246 | TAAGAAAAACCCTC |
MX000071 | SigB | strain | + | 13513 | 13524 | 1.28e-05 | 0.103 | AGGGGAATGAAA |
MX000017 | CTSR | strain | - | 13343 | 13359 | 1.29e-05 | 0.173 | CGTCAATTATAATAAAA |
MX000026 | TnrA | strain | + | 19705 | 19721 | 1.29e-05 | 0.243 | TGTCAACAAATCTTACT |
MX000048 | GltC | strain | - | 18842 | 18856 | 1.3e-05 | 0.106 | TTATCAATAATATAT |
MX000041 | CovR | strain | + | 20878 | 20893 | 1.3e-05 | 0.034 | TATTTTTTTTAAAAAA |
MX000092 | CaiF | strain | + | 20794 | 20839 | 1.31e-05 | 0.0992 | TTTGTTAATTATTGTATAATTATAAGAAAACATCATAAATTGCAAT |
MX000043 | AhrC | strain | - | 7116 | 7131 | 1.31e-05 | 0.0543 | ATTCATTTTCATTAAG |
MX000188 | SarA | strain | + | 20875 | 20890 | 1.31e-05 | 0.0151 | TTTTATTTTTTTTAAA |
MX000020 | AraR | strain | - | 6518 | 6533 | 1.31e-05 | 0.136 | ATTTGTACGGGCTATT |
MX000088 | Xre | strain | - | 20794 | 20816 | 1.32e-05 | 0.094 | ATAATTATACAATAATTAACAAA |
MX000111 | RpoN | strain | + | 4518 | 4563 | 1.32e-05 | 0.276 | GCTTCTGCAGTATTTTGCAGATGATGTGAACGTTGCTTCTGTGGTA |
MX000109 | TrpI | strain | - | 16802 | 16824 | 1.32e-05 | 0.232 | TTCCGTTAATTTATATGCCAGTT |
MX000094 | CysB | strain | - | 3084 | 3114 | 1.33e-05 | 0.108 | ATTTTGATAATTCATCTCTATATGCCGTATT |
MX000094 | CysB | strain | + | 5821 | 5851 | 1.33e-05 | 0.108 | AGGAGGTTATAAAAATGCCAAAATTAATTAT |
MX000087 | TreR | strain | - | 11618 | 11631 | 1.34e-05 | 0.266 | GCTGTATCTGCAAG |
MX000154 | OxyR | strain | - | 18275 | 18308 | 1.35e-05 | 0.047 | TATACATATCTATCATATTAATAATAGCAATATA |
MX000067 | SigE | strain | + | 16098 | 16109 | 1.35e-05 | 0.154 | CGCATAGAATGA |
MX000009 | ResD | strain | - | 6751 | 6771 | 1.35e-05 | 0.0543 | TGATGGTGCAAATTTATTCCA |
MX000043 | AhrC | strain | - | 17639 | 17654 | 1.36e-05 | 0.0543 | ATTTATTTTTATCCAA |
MX000004 | Fnr | strain | - | 16712 | 16725 | 1.36e-05 | 0.143 | TTGATATGCATCTA |
MX000041 | CovR | strain | - | 2717 | 2732 | 1.36e-05 | 0.034 | CTATCTTTTAAAATAT |
MX000044 | CitT | strain | + | 6437 | 6461 | 1.37e-05 | 0.12 | CGAAAAAACGGAATCGGACTTAAAA |
MX000057 | PhoP | strain | - | 20793 | 20823 | 1.38e-05 | 0.0198 | TTTTCTTATAATTATACAATAATTAACAAAA |
MX000035 | AlgU | strain | + | 10232 | 10241 | 1.39e-05 | 0.264 | AGGAACTTTT |
MX000130 | GalS | strain | - | 15016 | 15029 | 1.39e-05 | 0.492 | TGTTACCTCTTTCA |
MX000150 | NagC | strain | + | 20874 | 20896 | 1.39e-05 | 0.0869 | GTTTTATTTTTTTTAAAAAATAG |
MX000009 | ResD | strain | - | 550 | 570 | 1.4e-05 | 0.0543 | TTTTTCTCAAAATTTTCTATA |
MX000092 | CaiF | strain | + | 6711 | 6756 | 1.42e-05 | 0.0992 | GAGGAAAAAAATTCGCACTGAAAAAGAAGATATTGAATTTTGGAAT |
MX000048 | GltC | strain | + | 20415 | 20429 | 1.45e-05 | 0.106 | ATTTAAAAAAGAAAT |
MX000057 | PhoP | strain | - | 2459 | 2489 | 1.45e-05 | 0.0198 | TGAATTATATACTTAAATTCATTACATTACT |
MX000050 | Hpr | strain | + | 2713 | 2731 | 1.45e-05 | 0.068 | TATTATATTTTAAAAGATA |
MX000016 | Fur | strain | + | 1365 | 1387 | 1.46e-05 | 0.0275 | TATATAAAGATATTTCAGAAAAA |
MX000016 | Fur | strain | - | 12991 | 13013 | 1.46e-05 | 0.0275 | TTTTATACTGATTTTTTGATATT |
MX000135 | YhiX | strain | - | 14666 | 14683 | 1.46e-05 | 0.064 | TTCGGCTAATAATTTCAT |
MX000045 | CodY | strain | - | 14146 | 14210 | 1.46e-05 | 0.0151 | ATAACCTTTTTTATTCTGATAGAACATACCAATCATAATCATTGATAGAGCAAATAAATATATAT |
MX000114 | Ada | strain | - | 316 | 333 | 1.47e-05 | 0.0542 | AAAATCATTAAAAAGCAA |
MX000114 | Ada | strain | - | 11566 | 11583 | 1.47e-05 | 0.0542 | AAAATCATTAAAAAGCAA |
MX000114 | Ada | strain | + | 18474 | 18491 | 1.47e-05 | 0.0542 | AAAATGATAAAATAGCAA |
MX000185 | XylR | strain | + | 5779 | 5811 | 1.47e-05 | 0.0412 | AAAATATTAAAAAGAGATTTAAATTTAAAAAAT |
MX000198 | YrzC | strain | - | 13030 | 13053 | 1.48e-05 | 0.0712 | TAGCACAAATTATACTTGCAAGAA |
MX000072 | SigB | strain | + | 14325 | 14357 | 1.48e-05 | 0.191 | GAAGTTTTATAGTAGAAAGCATACGCAGAAAGA |
MX000041 | CovR | strain | + | 19372 | 19387 | 1.49e-05 | 0.0343 | CTTTTAATAAAAAAAC |
MX000023 | ComK | strain | + | 17331 | 17343 | 1.49e-05 | 0.115 | AAAATCATCTTTT |
MX000098 | DnaA | strain | - | 10300 | 10308 | 1.49e-05 | 0.307 | TTATCCGCA |
MX000089 | XylR | strain | + | 14510 | 14532 | 1.5e-05 | 0.1 | ATTGCTTTAAAGAAAAAATTAAT |
MX000004 | Fnr | strain | - | 17991 | 18004 | 1.51e-05 | 0.143 | TTCATATTTATCAA |
MX000065 | SigD | strain | + | 16653 | 16695 | 1.51e-05 | 0.206 | TTCAATGAATGCCAATCAGCGTATAAAAGAAACAAAAGGTGCT |
MX000188 | SarA | strain | + | 17394 | 17409 | 1.51e-05 | 0.0151 | AAATTTTATTAATAAT |
MX000028 | IHF | strain | - | 1414 | 1427 | 1.51e-05 | 0.15 | GAATCAATTATTTA |
MX000079 | SigW | strain | - | 17555 | 17586 | 1.51e-05 | 0.232 | CTTAAAACCATTTTCTTTATTTCACCTGTAAT |
MX000198 | YrzC | strain | - | 20865 | 20888 | 1.52e-05 | 0.0712 | TAAAAAAAATAAAACTTCCCGTAA |
MX000136 | IlvY | strain | - | 17161 | 17187 | 1.52e-05 | 0.168 | TAATATTAATTTTTACAATGATTCTTT |
MX000016 | Fur | strain | + | 2654 | 2676 | 1.52e-05 | 0.0275 | TTAAAAATAATTTGTATCATAAT |
MX000205 | CmeR | strain | - | 18394 | 18405 | 1.53e-05 | 0.12 | CCTTTATTATTT |
MX000057 | PhoP | strain | - | 20394 | 20424 | 1.53e-05 | 0.0198 | TTTTTTAAATTTTCTAATTCCGTCCTTATCT |
MX000089 | XylR | strain | + | 1895 | 1917 | 1.53e-05 | 0.1 | GCTGGTTTAAAAAATAAAAAATT |
MX000045 | CodY | strain | + | 16928 | 16992 | 1.54e-05 | 0.0151 | TTGTGCTGATTTCAGATGGAAGAGCGAATGTAAGTATAGGTTCAAAAAAACCGATAGAAGAGGTT |
MX000151 | NhaR | strain | - | 18446 | 18456 | 1.54e-05 | 0.219 | TCCTTAAAAAC |
MX000053 | LicT | strain | - | 20641 | 20669 | 1.54e-05 | 0.243 | GCCTTTTTCTCGATAAGGTATGCCCATCC |
MX000045 | CodY | strain | - | 2453 | 2517 | 1.54e-05 | 0.0151 | ATTTATTAAATTATATTTTTAACTTAATTGAATTATATACTTAAATTCATTACATTACTAACATT |
MX000045 | CodY | strain | + | 5757 | 5821 | 1.54e-05 | 0.0151 | GTTGTTCCGTTATAAGCGATATAAAATATTAAAAAGAGATTTAAATTTAAAAAATAAAAATTATA |
MX000057 | PhoP | strain | - | 20792 | 20822 | 1.54e-05 | 0.0198 | TTTCTTATAATTATACAATAATTAACAAAAT |
MX000160 | RcsA-RcsB | strain | - | 20177 | 20190 | 1.55e-05 | 0.246 | TCGGAATTTTCCTT |
MX000059 | PurR | strain | + | 9633 | 9652 | 1.55e-05 | 0.202 | AAATAAAACGTACAAATCTT |
MX000188 | SarA | strain | - | 18422 | 18437 | 1.55e-05 | 0.0151 | TTATATTATTTAAAAT |
MX000180 | HydG | strain | + | 13889 | 13944 | 1.57e-05 | 0.297 | AAAAAGCAGTGGAAATAACGCATCTTCTGAAGGTACCAAATCAGCGAACCCTGAAA |
MX000026 | TnrA | strain | + | 802 | 818 | 1.57e-05 | 0.243 | TGATAAAAATGTTTACA |
MX000188 | SarA | strain | - | 1900 | 1915 | 1.57e-05 | 0.0151 | TTTTTTATTTTTTAAA |
MX000047 | GerE | strain | + | 18739 | 18750 | 1.57e-05 | 0.317 | ATATAGGTGAAA |
MX000073 | SigB | strain | + | 16288 | 16319 | 1.58e-05 | 0.0833 | ACTGATGAATCTTTAGAAGAAAAAGAAAGAGA |
MX000016 | Fur | strain | + | 2708 | 2730 | 1.59e-05 | 0.0275 | TATGCTATTATATTTTAAAAGAT |
MX000014 | OmpR | strain | + | 18683 | 18709 | 1.59e-05 | 0.154 | GACAAAAACAGTAAATATTGATAGAAT |
MX000056 | MtrB | strain | - | 17639 | 17694 | 1.6e-05 | 0.0889 | ATTTCCTGTATTTTTTTATTTATATCATCTAATTCTTTTAATTTATTTTTATCCAA |
MX000044 | CitT | strain | + | 17768 | 17792 | 1.6e-05 | 0.12 | GAAAAATATCAGAATGCTGTTAAAA |
MX000188 | SarA | strain | - | 18340 | 18355 | 1.6e-05 | 0.0151 | ATTTAAAATTAAATTT |
MX000121 | CytR | strain | + | 20727 | 20738 | 1.61e-05 | 0.436 | GGAAAATTGGGT |
MX000071 | SigB | strain | + | 13194 | 13205 | 1.61e-05 | 0.107 | TGGGGAAAAGAT |
MX000011 | RhlR | strain | - | 7953 | 7968 | 1.61e-05 | 0.162 | CTATAACATTTGGCAG |
MX000070 | SigE | strain | - | 6970 | 7006 | 1.61e-05 | 0.171 | TTATATTTTTTAGTCCTGACTTTTCCATATTTTCCTT |
MX000116 | ArgR | strain | + | 7247 | 7260 | 1.61e-05 | 0.119 | TGATTATTTATCCA |
MX000136 | IlvY | strain | + | 6738 | 6764 | 1.62e-05 | 0.168 | AGATATTGAATTTTGGAATAAATTTGC |
MX000039 | RofA | strain | - | 17367 | 17383 | 1.62e-05 | 0.084 | TTTTCCCATATAATAAT |
MX000069 | SigE | strain | - | 20226 | 20261 | 1.62e-05 | 0.175 | TGTTTAATGTCTTTTCCATATCATTGTAACTTTGCA |
MX000198 | YrzC | strain | + | 19219 | 19242 | 1.62e-05 | 0.0712 | GAGCAAATATTATACGTATAGGAA |
MX000038 | CovR | strain | + | 11523 | 11533 | 1.63e-05 | 0.0786 | TAAAATTAAAA |
MX000038 | CovR | strain | + | 17649 | 17659 | 1.63e-05 | 0.0786 | ATAAATTAAAA |
MX000038 | CovR | strain | - | 2700 | 2710 | 1.63e-05 | 0.0786 | ATAAATTAAAA |
MX000168 | DegU | strain | - | 10067 | 10087 | 1.64e-05 | 0.216 | AAGAGCATTTAGATCTTTTAG |
MX000188 | SarA | strain | + | 5795 | 5810 | 1.65e-05 | 0.0151 | ATTTAAATTTAAAAAA |
MX000166 | RcsB | strain | - | 3097 | 3111 | 1.65e-05 | 0.211 | TTGATAATTCATCTC |
MX000074 | SigB | strain | + | 17433 | 17463 | 1.65e-05 | 0.111 | AAGTTTCATTTAATGCAATAACAGGAAAAGA |
MX000017 | CTSR | strain | - | 12305 | 12321 | 1.66e-05 | 0.173 | GGTTTATAAAGGTCAAG |
MX000027 | GlnR | strain | - | 20796 | 20812 | 1.66e-05 | 0.18 | TTATACAATAATTAACA |
MX000210 | NtcA | strain | - | 1982 | 1995 | 1.67e-05 | 0.423 | GTAGAAATTAATAC |
MX000128 | Fur | strain | - | 17699 | 17717 | 1.69e-05 | 0.106 | GATTATTAGAAGCATTATT |
MX000188 | SarA | strain | + | 18421 | 18436 | 1.69e-05 | 0.0151 | TATTTTAAATAATATA |
MX000194 | SigI | strain | - | 19014 | 19028 | 1.71e-05 | 0.658 | TTCAAGCATTTTAAT |
MX000188 | SarA | strain | - | 19665 | 19680 | 1.71e-05 | 0.0151 | AATTGTATATTGAATT |
MX000030 | DegU | strain | + | 3864 | 3882 | 1.71e-05 | 0.21 | ACATTAGCTAAGTCTTCGG |
MX000185 | XylR | strain | - | 2397 | 2429 | 1.72e-05 | 0.0412 | TATAAATTAATAATGGCTTTGCTTTTTCATAAT |
MX000041 | CovR | strain | - | 1925 | 1940 | 1.72e-05 | 0.0355 | TTACCATTTACAAAAC |
MX000056 | MtrB | strain | - | 18513 | 18568 | 1.73e-05 | 0.0889 | TGAAACATAATCCTTGCCATTCACAGCTACCTTGTCATACATTTTTATCCCTGAAA |
MX000045 | CodY | strain | + | 20023 | 20087 | 1.73e-05 | 0.0158 | CTTAAATAATTTACAAATGAAGATAGGAGTGGATAAAATGTTAACACCTATGGATATACATAATA |
MX000012 | LasR | strain | - | 7953 | 7968 | 1.73e-05 | 0.175 | CTATAACATTTGGCAG |
MX000016 | Fur | strain | - | 2322 | 2344 | 1.73e-05 | 0.0276 | TTTACTTATAATTAAAGAATAAT |
MX000047 | GerE | strain | - | 14377 | 14388 | 1.75e-05 | 0.317 | AAATAGGTTATA |
MX000115 | AraC | strain | + | 15504 | 15532 | 1.75e-05 | 0.325 | AGGCAATAAAAAAAGGAGAAAAATCCTTT |
MX000092 | CaiF | strain | + | 7239 | 7284 | 1.76e-05 | 0.0992 | GGCTAATATGATTATTTATCCATTTAACCTTCTTTATAGTTTAGGA |
MX000155 | OxyR | strain | - | 1068 | 1113 | 1.76e-05 | 0.281 | AAAATAAAGTCAGGATCCCACTTCAACAGTTTTTCTTTATCAACTG |
MX000090 | Zur | strain | - | 416 | 434 | 1.77e-05 | 0.182 | TAATCGTAACCGTCTTATT |
MX000012 | LasR | strain | - | 15941 | 15956 | 1.77e-05 | 0.175 | CTATCAGTTCTAGCAT |
MX000116 | ArgR | strain | - | 7734 | 7747 | 1.77e-05 | 0.119 | TGAATAAACCTTCA |
MX000199 | CovR | strain | - | 7039 | 7047 | 1.77e-05 | 0.0724 | TTTTTTAAT |
MX000199 | CovR | strain | - | 14996 | 15004 | 1.77e-05 | 0.0724 | TTTTTTAAT |
MX000199 | CovR | strain | - | 17753 | 17761 | 1.77e-05 | 0.0724 | TTTTTTAAT |
MX000199 | CovR | strain | - | 19478 | 19486 | 1.77e-05 | 0.0724 | TTTTTTAAT |
MX000041 | CovR | strain | + | 19098 | 19113 | 1.78e-05 | 0.0355 | CCTTATTTTAAAAAAA |
MX000078 | SigL | strain | - | 2420 | 2472 | 1.78e-05 | 0.114 | TTCATTACATTACTAACATTAACTGGATATGAAAATCGCATCTTATAAATTAA |
MX000076 | SigH | strain | - | 4991 | 5002 | 1.79e-05 | 0.128 | AAAGGAGATATA |
MX000016 | Fur | strain | + | 17985 | 18007 | 1.8e-05 | 0.0276 | TTTACTTTGATAAATATGAAAAT |
MX000056 | MtrB | strain | - | 18183 | 18238 | 1.8e-05 | 0.0889 | TCCTCTTAATTGATTATCATATCCATCTATGTTAACTTTTATTTTTTCTCCTTCTT |
MX000078 | SigL | strain | + | 3556 | 3608 | 1.81e-05 | 0.114 | TTGATATAGATAAAGAAAAGCTTTTGTCATGGAATCCTGATATTATTTTTATT |
MX000014 | OmpR | strain | - | 19895 | 19921 | 1.81e-05 | 0.154 | AAATCCAGCATTAAATTTCTACCATAT |
MX000185 | XylR | strain | + | 12739 | 12771 | 1.81e-05 | 0.0412 | AAGCAAAACTAATGCCGGTAAAAATAAGAAGAT |
MX000024 | CcpC | strain | + | 2773 | 2787 | 1.81e-05 | 0.302 | ATATGAAAAACATAT |
MX000094 | CysB | strain | - | 12893 | 12923 | 1.82e-05 | 0.108 | TAAATGGTATCCCAAGCCATTTTTCAAAATA |
MX000176 | YdiH | strain | + | 20794 | 20815 | 1.82e-05 | 0.202 | TTTGTTAATTATTGTATAATTA |
MX000128 | Fur | strain | + | 2360 | 2378 | 1.83e-05 | 0.106 | GAAAATGATTCTTATTTTA |
MX000188 | SarA | strain | - | 18424 | 18439 | 1.83e-05 | 0.0156 | TTTTATATTATTTAAA |
MX000165 | MarA | strain | + | 18269 | 18288 | 1.83e-05 | 0.23 | AAAGCATATATTGCTATTAT |
MX000099 | PhoB | strain | - | 19135 | 19150 | 1.83e-05 | 0.204 | TGACATACATTTTTGA |
MX000045 | CodY | strain | + | 2456 | 2520 | 1.83e-05 | 0.0158 | GTTAGTAATGTAATGAATTTAAGTATATAATTCAATTAAGTTAAAAATATAATTTAATAAATATA |
MX000070 | SigE | strain | - | 17702 | 17738 | 1.84e-05 | 0.171 | TTTCTATATCTGCTTCATATGGATTATTAGAAGCATT |
MX000037 | RpoE-SigE | strain | + | 6743 | 6773 | 1.84e-05 | 0.371 | TTGAATTTTGGAATAAATTTGCACCATCATA |
MX000154 | OxyR | strain | - | 14157 | 14190 | 1.84e-05 | 0.0503 | AGAACATACCAATCATAATCATTGATAGAGCAAA |
MX000059 | PurR | strain | + | 662 | 681 | 1.85e-05 | 0.202 | CCAAATGCCGAACAAATTAT |
MX000142 | OmpR | strain | - | 262 | 271 | 1.86e-05 | 0.156 | TTTTCTTTTT |
MX000039 | RofA | strain | - | 8442 | 8458 | 1.86e-05 | 0.084 | TTTTTTATCGAATTCAT |
MX000185 | XylR | strain | - | 9384 | 9416 | 1.86e-05 | 0.0412 | GAATAGTTCCAATGGCAATATCAGGATAGCAAT |
MX000168 | DegU | strain | - | 19134 | 19154 | 1.89e-05 | 0.216 | AGACTGACATACATTTTTGAG |
MX000107 | OxyR | strain | - | 7648 | 7684 | 1.89e-05 | 0.169 | ATGACTATGCCATACTACAGCGGTAACTTTTTTCATT |
MX000076 | SigH | strain | + | 17686 | 17697 | 1.9e-05 | 0.128 | ACAGGAAATCAA |
MX000205 | CmeR | strain | + | 16705 | 16716 | 1.9e-05 | 0.12 | CTTTTATTAGAT |
MX000064 | SigB | strain | - | 15215 | 15226 | 1.9e-05 | 0.156 | AACGTTTAATAT |
MX000073 | SigB | strain | - | 13466 | 13497 | 1.9e-05 | 0.0833 | TAGGTTTTAGGGTTCTGTCTAAGGAATATTTA |
MX000150 | NagC | strain | - | 7212 | 7234 | 1.92e-05 | 0.0869 | CTTTGTCTTCCTCATGAAATATA |
MX000135 | YhiX | strain | + | 2707 | 2724 | 1.93e-05 | 0.064 | TTATGCTATTATATTTTA |
MX000135 | YhiX | strain | - | 16275 | 16292 | 1.93e-05 | 0.064 | TCAGTTTTTTTTTATCAT |
MX000011 | RhlR | strain | + | 4522 | 4537 | 1.93e-05 | 0.162 | CTGCAGTATTTTGCAG |
MX000016 | Fur | strain | + | 18601 | 18623 | 1.94e-05 | 0.0282 | ATATAGAAGATATAAAAAAAAAT |
MX000070 | SigE | strain | - | 19208 | 19244 | 1.95e-05 | 0.171 | TGTTCCTATACGTATAATATTTGCTCCTTCCTCAATA |
MX000080 | SigW | strain | - | 20147 | 20158 | 1.95e-05 | 0.142 | TTCTGAAACCTT |
MX000073 | SigB | strain | + | 20712 | 20743 | 1.97e-05 | 0.0833 | ATTGGTGCTTTAACAGGAAAATTGGGTAATAT |
MX000074 | SigB | strain | + | 19002 | 19032 | 1.97e-05 | 0.111 | ACGATTGATTTTATTAAAATGCTTGAAAGGT |
MX000082 | SigW | strain | - | 11197 | 11229 | 1.97e-05 | 0.14 | CTTGTAATATCGTCAAAAATCCAGTCATCTACC |
MX000188 | SarA | strain | + | 4008 | 4023 | 1.97e-05 | 0.0162 | AAAAATTTTTATAATT |
MX000053 | LicT | strain | + | 15412 | 15440 | 1.98e-05 | 0.243 | AAAATTGCCTGCAATAACAAGAAAAATGC |
MX000150 | NagC | strain | - | 18419 | 18441 | 1.99e-05 | 0.0869 | TATTTTATATTATTTAAAATAAA |
MX000078 | SigL | strain | + | 12998 | 13050 | 1.99e-05 | 0.114 | AAAAATCAGTATAAAATTAATATTTGTTTTTGTTCTTGCAAGTATAATTTGTG |
MX000041 | CovR | strain | - | 7035 | 7050 | 2e-05 | 0.0374 | TTCTTTTTTAATATCC |
MX000035 | AlgU | strain | + | 18760 | 18769 | 2e-05 | 0.264 | AGGAACTTTG |
MX000037 | RpoE-SigE | strain | + | 12610 | 12640 | 2e-05 | 0.371 | ATGGATTTTAGATAAAAATCCTGATATAATA |
MX000050 | Hpr | strain | + | 9270 | 9288 | 2e-05 | 0.068 | ATCAATATATAGCTACTTA |
MX000154 | OxyR | strain | + | 2652 | 2685 | 2e-05 | 0.0503 | TATTAAAAATAATTTGTATCATAATTATTTGTAT |
MX000137 | LacI | strain | - | 8202 | 8222 | 2.01e-05 | 0.74 | AACTGCGGGCAAATAGCAAAC |
MX000068 | SigE | strain | + | 2476 | 2512 | 2.01e-05 | 0.173 | AAGTATATAATTCAATTAAGTTAAAAATATAATTTAA |
MX000135 | YhiX | strain | - | 916 | 933 | 2.01e-05 | 0.064 | TTAGAAATATTTTTTATT |
MX000061 | PyrR | strain | - | 3876 | 3894 | 2.02e-05 | 0.276 | GTTTAAAGCCACCCGAAGA |
MX000023 | ComK | strain | - | 20499 | 20511 | 2.02e-05 | 0.125 | AAAAATTCATTTT |
MX000140 | LexA | strain | - | 12030 | 12045 | 2.02e-05 | 0.33 | CTGTTTAAACCTGCAG |
MX000094 | CysB | strain | - | 20307 | 20337 | 2.03e-05 | 0.108 | TGTATGATAAGTTCAGCCTCTTTTGCGGCAT |
MX000072 | SigB | strain | + | 17432 | 17464 | 2.04e-05 | 0.191 | AAAGTTTCATTTAATGCAATAACAGGAAAAGAT |
MX000134 | IciA | strain | - | 3910 | 3921 | 2.05e-05 | 0.246 | AGATATTTTATT |
MX000065 | SigD | strain | + | 16938 | 16980 | 2.05e-05 | 0.206 | TTCAGATGGAAGAGCGAATGTAAGTATAGGTTCAAAAAAACCG |
MX000154 | OxyR | strain | + | 2694 | 2727 | 2.06e-05 | 0.0503 | TTTAATTTTTAATTTATGCTATTATATTTTAAAA |
MX000045 | CodY | strain | - | 19923 | 19987 | 2.06e-05 | 0.0158 | AACACAAGTTTTACAATAATTGGTTTTATCAGATACTGAATTACAATTATTGCTAAAATCGGCGA |
MX000087 | TreR | strain | + | 15224 | 15237 | 2.06e-05 | 0.266 | GTTGTTAATACAAG |
MX000087 | TreR | strain | + | 16747 | 16760 | 2.06e-05 | 0.266 | GTTGTATTTAAAGG |
MX000016 | Fur | strain | - | 2490 | 2512 | 2.07e-05 | 0.0286 | TTAAATTATATTTTTAACTTAAT |
MX000036 | AlgU | strain | - | 9403 | 9411 | 2.07e-05 | 0.831 | GTTCCAATG |
MX000079 | SigW | strain | - | 3501 | 3532 | 2.08e-05 | 0.232 | TCTGCAACATTTTTAGCATTTACAATTACAAA |
MX000096 | Lrp | strain | - | 19483 | 19496 | 2.08e-05 | 0.179 | CGGCTTTTTATTTT |
MX000174 | SoxS | strain | + | 9906 | 9925 | 2.08e-05 | 0.291 | AAAGCAGGATTTGCCAACAA |
MX000057 | PhoP | strain | + | 17731 | 17761 | 2.09e-05 | 0.0227 | TATAGAAAATCTTGAAAATTTAATTAAAAAA |
MX000092 | CaiF | strain | + | 19565 | 19610 | 2.1e-05 | 0.0992 | TATTTTTGCACTTAATGGTGAGATAAAAAAAATCTCAAATTTTATA |
MX000057 | PhoP | strain | - | 17670 | 17700 | 2.11e-05 | 0.0227 | TTTTTGATTTCCTGTATTTTTTTATTTATAT |
MX000078 | SigL | strain | + | 11494 | 11546 | 2.11e-05 | 0.114 | TGAAAGAAGTAAAAGCAAAGCTTGGGGAATAAAATTAAAACTTTAAGGAGGAT |
MX000123 | DeoR | strain | + | 18905 | 18920 | 2.11e-05 | 0.0748 | TGATAAAAGAGCAAAA |
MX000006 | SpoIIID | strain | - | 13424 | 13433 | 2.11e-05 | 0.887 | GGAACAAGCA |
MX000059 | PurR | strain | - | 8350 | 8369 | 2.11e-05 | 0.202 | AATATTCCCGTACGATTTCT |
MX000073 | SigB | strain | + | 2363 | 2394 | 2.12e-05 | 0.0833 | AATGATTCTTATTTTAATAATAAAGGAGAATT |
MX000151 | NhaR | strain | - | 4394 | 4404 | 2.12e-05 | 0.219 | TCCTAAAAATG |
MX000136 | IlvY | strain | - | 5569 | 5595 | 2.12e-05 | 0.168 | TTATAACAATTGCAGCAATATTTTCCT |
MX000092 | CaiF | strain | + | 18755 | 18800 | 2.13e-05 | 0.0992 | GGTTCAGGAACTTTGTGATAAATATCCATATTTAAAAGATTTGACT |
MX000057 | PhoP | strain | + | 20000 | 20030 | 2.13e-05 | 0.0227 | TTAACTTATTAAAATAGATTATACTTAAATA |
MX000039 | RofA | strain | + | 20881 | 20897 | 2.13e-05 | 0.084 | TTTTTTTAAAAAATAGG |
MX000079 | SigW | strain | + | 8828 | 8859 | 2.13e-05 | 0.232 | TTAGATACATTGGAAAGTGTTGCCCGTATAAT |
MX000188 | SarA | strain | + | 17249 | 17264 | 2.14e-05 | 0.017 | TATTTTTTTTAAAATT |
MX000123 | DeoR | strain | - | 9712 | 9727 | 2.14e-05 | 0.0748 | TGAAAGCAGACCATGA |
MX000173 | SoxR | strain | + | 7745 | 7763 | 2.15e-05 | 0.288 | TCAGCACGCTTTCTTGAGG |
MX000173 | SoxR | strain | + | 14596 | 14614 | 2.15e-05 | 0.288 | TCCCCTCGTTGGCTTGATG |
MX000173 | SoxR | strain | - | 7746 | 7764 | 2.15e-05 | 0.288 | TCCTCAAGAAAGCGTGCTG |
MX000009 | ResD | strain | - | 1367 | 1387 | 2.16e-05 | 0.0543 | TTTTTCTGAAATATCTTTATA |
MX000091 | ArcA | strain | - | 712 | 721 | 2.16e-05 | 0.332 | TGTTAAATAT |
MX000185 | XylR | strain | + | 17672 | 17704 | 2.16e-05 | 0.0423 | ATAAATAAAAAAATACAGGAAATCAAAAATAAT |
MX000076 | SigH | strain | - | 4239 | 4250 | 2.17e-05 | 0.128 | AGAGGATTTCTA |
MX000013 | Fur | strain | - | 11572 | 11590 | 2.17e-05 | 0.143 | CAGAACAAAAATCATTAAA |
MX000163 | Lrp | strain | + | 6487 | 6511 | 2.17e-05 | 0.576 | AAATCAAGGGTATTATGCCGTTCTC |
MX000099 | PhoB | strain | + | 893 | 908 | 2.18e-05 | 0.204 | TGTCAGCAAGATTTAA |
MX000045 | CodY | strain | + | 7491 | 7555 | 2.19e-05 | 0.0158 | GCGTGTTGATGAAGGAGGAAAGATTTAACAATGGAATGAAATAAAATTCAGTCTACTTGACATTA |
MX000045 | CodY | strain | - | 17027 | 17091 | 2.19e-05 | 0.0158 | AATTTCTTTTGCAAGTCCAAAAGTTATAAAATTATCCTTTTCAACATCGATAACAATAGATTTTA |
MX000090 | Zur | strain | + | 2362 | 2380 | 2.19e-05 | 0.182 | AAATGATTCTTATTTTAAT |
MX000009 | ResD | strain | - | 18016 | 18036 | 2.2e-05 | 0.0543 | AAATTATACATTTTTTTTGTG |
MX000185 | XylR | strain | - | 13024 | 13056 | 2.2e-05 | 0.0423 | GTTTAGCACAAATTATACTTGCAAGAACAAAAA |
MX000039 | RofA | strain | - | 20788 | 20804 | 2.2e-05 | 0.084 | TAATTAACAAAATTCGT |
MX000016 | Fur | strain | - | 20801 | 20823 | 2.23e-05 | 0.0294 | TTTTCTTATAATTATACAATAAT |
MX000198 | YrzC | strain | + | 1324 | 1347 | 2.23e-05 | 0.0852 | AAAAGCTAATGAAATTTATAAGAT |
MX000184 | YiaJ | strain | + | 20118 | 20152 | 2.23e-05 | 0.139 | ATGAAAATGAGGTTGATGAATTTTTAGATAAGGTT |
MX000154 | OxyR | strain | - | 18837 | 18870 | 2.24e-05 | 0.0503 | AAATCATTTTGACCTTATCAATAATATATTTAAC |
MX000009 | ResD | strain | - | 19030 | 19050 | 2.24e-05 | 0.0543 | TTATTCTTATATTTTTAAACC |
MX000052 | LevR | strain | + | 14990 | 15002 | 2.25e-05 | 0.515 | AAGTGAATTAAAA |
MX000205 | CmeR | strain | + | 20807 | 20818 | 2.25e-05 | 0.12 | GTATAATTATAA |
MX000046 | ComA | strain | + | 10531 | 10550 | 2.25e-05 | 0.472 | TTCAGGCATCACCCGTGACA |
MX000057 | PhoP | strain | - | 544 | 574 | 2.26e-05 | 0.0227 | ACTCTTTTTCTCAAAATTTTCTATACCAACA |
MX000043 | AhrC | strain | - | 2286 | 2301 | 2.26e-05 | 0.0739 | ATTAATTTACATTCAG |
MX000200 | MelR | strain | - | 17548 | 17565 | 2.26e-05 | 0.208 | TCACCTGTAATAGGTGAA |
MX000057 | PhoP | strain | - | 18589 | 18619 | 2.28e-05 | 0.0227 | TTTTTTATATCTTCTATATTTTCTAATATGT |
MX000080 | SigW | strain | - | 1280 | 1291 | 2.28e-05 | 0.142 | ATATAAAACCTT |
MX000080 | SigW | strain | - | 3771 | 3782 | 2.28e-05 | 0.142 | ATATAAAACCTT |
MX000085 | SigX | strain | - | 18730 | 18762 | 2.29e-05 | 0.302 | CCTGAACCTTATTTTCACCTATATCTTTCAAAC |
MX000048 | GltC | strain | + | 5199 | 5213 | 2.29e-05 | 0.134 | ATTGAAAAAAGAGAT |
MX000066 | SigE | strain | - | 13466 | 13476 | 2.3e-05 | 0.348 | AGGAATATTTA |
MX000188 | SarA | strain | - | 1901 | 1916 | 2.31e-05 | 0.0174 | ATTTTTTATTTTTTAA |
MX000034 | AlgU | strain | - | 5712 | 5743 | 2.32e-05 | 0.838 | TGAAATTTTTCTACAGCAATGGGAATCCCATA |
MX000067 | SigE | strain | + | 4820 | 4831 | 2.32e-05 | 0.199 | CTCATATAATGA |
MX000017 | CTSR | strain | + | 18826 | 18842 | 2.33e-05 | 0.173 | AGACGAATAAGGTTAAA |
MX000082 | SigW | strain | + | 17171 | 17203 | 2.33e-05 | 0.14 | TGTAAAAATTAATATTATATATAAACGTATAGA |
MX000129 | GalR | strain | + | 13859 | 13871 | 2.34e-05 | 0.952 | TGGAAGCAATTCC |
MX000075 | SigB | strain | + | 7406 | 7435 | 2.34e-05 | 0.462 | ACATTATCTATAATTATGTTAAGGAAAAGG |
MX000092 | CaiF | strain | - | 18996 | 19041 | 2.34e-05 | 0.0992 | TATTTTTAAACCTTTCAAGCATTTTAATAAAATCAATCGTATCATC |
MX000188 | SarA | strain | - | 17171 | 17186 | 2.35e-05 | 0.0174 | AATATTAATTTTTACA |
MX000107 | OxyR | strain | - | 810 | 846 | 2.35e-05 | 0.169 | ATTACTTTACCTATTATCTGCAATGATGTGTAAACAT |
MX000009 | ResD | strain | + | 702 | 722 | 2.36e-05 | 0.0543 | TTTTTGTTGCATATTTAACAG |
MX000076 | SigH | strain | + | 12436 | 12447 | 2.36e-05 | 0.128 | AAAGGATTTGAA |
MX000100 | RpoN | strain | - | 1214 | 1262 | 2.36e-05 | 0.213 | CAGCAATGGCATTATCAATATTTGTAGTATAATAATTAAATGGAATTTG |
MX000020 | AraR | strain | + | 17504 | 17519 | 2.36e-05 | 0.153 | ATTAGTACGGATGCAT |
MX000041 | CovR | strain | - | 17748 | 17763 | 2.37e-05 | 0.0417 | TCTTTTTTAATTAAAT |
MX000115 | AraC | strain | - | 9973 | 10001 | 2.37e-05 | 0.325 | CCTCAATAAGATGAGCTAAAAAGGCTTTA |
MX000089 | XylR | strain | - | 3353 | 3375 | 2.37e-05 | 0.13 | AATTTTTTATATAATCTACTACT |
MX000193 | KdgR | strain | - | 20140 | 20157 | 2.37e-05 | 0.42 | TCTGAAACCTTATCTAAA |
MX000049 | GltR | strain | - | 18928 | 18942 | 2.38e-05 | 0.164 | AATCCATAATAAGAT |
MX000007 | ArgR | strain | - | 10680 | 10696 | 2.38e-05 | 0.999 | TGTGGCGTTTCTCCAAG |
MX000105 | GlpR | strain | - | 10755 | 10774 | 2.4e-05 | 0.317 | TTCTTTCCAAGCTGAAGCAT |
MX000151 | NhaR | strain | - | 7612 | 7622 | 2.42e-05 | 0.219 | TAGTAAAAACA |
MX000061 | PyrR | strain | - | 12845 | 12863 | 2.42e-05 | 0.276 | CCTTAAAGCGATCAGGATA |
MX000210 | NtcA | strain | + | 1034 | 1047 | 2.42e-05 | 0.423 | GTAGTAGATGAAAC |
MX000016 | Fur | strain | + | 12981 | 13003 | 2.43e-05 | 0.0297 | TTTGTGTTAAAATATCAAAAAAT |
MX000031 | PhoP | strain | + | 16873 | 16889 | 2.43e-05 | 0.286 | GGGTTAGAGGTTATTAA |
MX000045 | CodY | strain | + | 2366 | 2430 | 2.45e-05 | 0.0158 | GATTCTTATTTTAATAATAAAGGAGAATTTGATTATGAAAAAGCAAAGCCATTATTAATTTATAA |
MX000045 | CodY | strain | + | 2641 | 2705 | 2.45e-05 | 0.0158 | CTGTTTTCAGGTATTAAAAATAATTTGTATCATAATTATTTGTATACTATTGATTTAATTTTTAA |
MX000045 | CodY | strain | - | 14142 | 14206 | 2.45e-05 | 0.0158 | CCTTTTTTATTCTGATAGAACATACCAATCATAATCATTGATAGAGCAAATAAATATATATAATT |
MX000045 | CodY | strain | + | 17289 | 17353 | 2.45e-05 | 0.0158 | TTTCTATGTAAAATATTAATTTATGCTTAAAAACTTAGAAGGAAAATCATCTTTTATATAGAATA |
MX000045 | CodY | strain | + | 17644 | 17708 | 2.45e-05 | 0.0158 | TAAAAATAAATTAAAAGAATTAGATGATATAAATAAAAAAATACAGGAAATCAAAAATAATGCTT |
MX000020 | AraR | strain | - | 10429 | 10444 | 2.45e-05 | 0.153 | TTTTGGACGTACTCCT |
MX000114 | Ada | strain | + | 15039 | 15056 | 2.45e-05 | 0.0815 | GAAAAAATAAAAGGGCAA |
MX000064 | SigB | strain | + | 5618 | 5629 | 2.46e-05 | 0.156 | AAGGTTTTCTAA |
MX000016 | Fur | strain | + | 7105 | 7127 | 2.47e-05 | 0.0297 | GATTATAAAGCCTTAATGAAAAT |
MX000063 | SenS | strain | + | 16701 | 16721 | 2.48e-05 | 0.407 | ATCTCTTTTATTAGATGCATA |
MX000188 | SarA | strain | - | 6595 | 6610 | 2.48e-05 | 0.0174 | TTTTATTATTTTAATC |
MX000024 | CcpC | strain | + | 13305 | 13319 | 2.5e-05 | 0.302 | ATAAGTACAAGTGAT |
MX000203 | DevR | strain | + | 2851 | 2864 | 2.51e-05 | 0.898 | GCTCTAAAGCCCCT |
MX000154 | OxyR | strain | + | 1224 | 1257 | 2.51e-05 | 0.0503 | TTAATTATTATACTACAAATATTGATAATGCCAT |
MX000009 | ResD | strain | - | 5641 | 5661 | 2.52e-05 | 0.0543 | AAATTGTCTTATCTTTTAAAA |
MX000100 | RpoN | strain | - | 4010 | 4058 | 2.52e-05 | 0.213 | ACTGACAAAACTAAAACAAAAAGTGCACACAATAAAATTATAAAAATTT |
MX000076 | SigH | strain | + | 113 | 124 | 2.53e-05 | 0.128 | AAAGGAAATTTA |
MX000027 | GlnR | strain | + | 18241 | 18257 | 2.54e-05 | 0.18 | TGTTTTAAAAGTTTATA |
MX000209 | NtcA | strain | - | 6261 | 6274 | 2.54e-05 | 0.32 | GTATCTACCAATAC |
MX000167 | DegU | strain | + | 18499 | 18518 | 2.54e-05 | 0.317 | AAATAAAGACATGGTTTCAG |
MX000188 | SarA | strain | - | 17746 | 17761 | 2.54e-05 | 0.0174 | TTTTTTAATTAAATTT |
MX000188 | SarA | strain | + | 18418 | 18433 | 2.54e-05 | 0.0174 | ATTTATTTTAAATAAT |
MX000050 | Hpr | strain | + | 17175 | 17193 | 2.56e-05 | 0.068 | AAAATTAATATTATATATA |
MX000045 | CodY | strain | + | 17307 | 17371 | 2.57e-05 | 0.0158 | ATTTATGCTTAAAAACTTAGAAGGAAAATCATCTTTTATATAGAATATAAACTTAGGTGGATTAT |
MX000104 | FleQ | strain | + | 6932 | 6942 | 2.57e-05 | 1 | CGGCGGTTGAC |
MX000069 | SigE | strain | + | 18836 | 18871 | 2.57e-05 | 0.208 | GGTTAAATATATTATTGATAAGGTCAAAATGATTTA |
MX000045 | CodY | strain | - | 2349 | 2413 | 2.58e-05 | 0.0158 | CTTTGCTTTTTCATAATCAAATTCTCCTTTATTATTAAAATAAGAATCATTTTCTTCAAGATGCA |
MX000082 | SigW | strain | + | 1196 | 1228 | 2.58e-05 | 0.14 | AACGAAAAAGTTTATAGTCAAATTCCATTTAAT |
MX000088 | Xre | strain | - | 4348 | 4370 | 2.59e-05 | 0.094 | TTATTGATGATTATTGACTCAGA |
MX000150 | NagC | strain | - | 16361 | 16383 | 2.6e-05 | 0.0869 | CACAATTCTTCTTACGGAAAATT |
MX000184 | YiaJ | strain | + | 3025 | 3059 | 2.6e-05 | 0.139 | CTAAAAAAGTCGTTGGTATTGAGGATATTAATTTA |
MX000184 | YiaJ | strain | - | 2637 | 2671 | 2.6e-05 | 0.139 | GATACAAATTATTTTTAATACCTGAAAACAGTTTT |
MX000184 | YiaJ | strain | - | 19977 | 20011 | 2.6e-05 | 0.139 | TTAATAAGTTAACCCATAAACATTAACACAAGTTT |
MX000074 | SigB | strain | + | 4641 | 4671 | 2.6e-05 | 0.125 | TGTTTATTTCATGTTTAACAGATGGAATTAT |
MX000092 | CaiF | strain | - | 18748 | 18793 | 2.6e-05 | 0.0992 | TCTTTTAAATATGGATATTTATCACAAAGTTCCTGAACCTTATTTT |
MX000085 | SigX | strain | + | 19973 | 20005 | 2.61e-05 | 0.302 | TGTAAAACTTGTGTTAATGTTTATGGGTTAACT |
MX000016 | Fur | strain | + | 10146 | 10168 | 2.62e-05 | 0.0301 | TCTTATCCGGTTTTAATGGAAAA |
MX000065 | SigD | strain | + | 12172 | 12214 | 2.62e-05 | 0.206 | TATCGGAAAATGGCAAACACCTACTATTGAAAAAATCATGTCA |
MX000179 | XapR | strain | + | 12726 | 12738 | 2.63e-05 | 0.528 | CTAATGCAGTTTT |
MX000057 | PhoP | strain | - | 3034 | 3064 | 2.64e-05 | 0.0227 | GCTTTTAAATTAATATCCTCAATACCAACGA |
MX000050 | Hpr | strain | + | 18425 | 18443 | 2.64e-05 | 0.068 | TTAAATAATATAAAATATC |
MX000015 | MtrB | strain | + | 5692 | 5699 | 2.65e-05 | 0.277 | CAAAAAAT |
MX000015 | MtrB | strain | + | 12996 | 13003 | 2.65e-05 | 0.277 | CAAAAAAT |
MX000015 | MtrB | strain | - | 20506 | 20513 | 2.65e-05 | 0.277 | CAAAAAAT |
MX000195 | YsiA | strain | + | 7526 | 7545 | 2.65e-05 | 0.739 | ATGAAATAAAATTCAGTCTA |
MX000057 | PhoP | strain | - | 1394 | 1424 | 2.66e-05 | 0.0227 | TCAATTATTTAAAATTCAATTGTTCAAATCC |
MX000105 | GlpR | strain | + | 14404 | 14423 | 2.66e-05 | 0.317 | TTTTGACGCACTTGAAAAAT |
MX000109 | TrpI | strain | - | 1041 | 1063 | 2.67e-05 | 0.232 | ATGACCGATTTTACCTGTTTCAT |
MX000185 | XylR | strain | + | 18079 | 18111 | 2.68e-05 | 0.0474 | AAAAAATGGCAATTTAAAGCAAAATAACATGCT |
MX000170 | Rob | strain | + | 18084 | 18103 | 2.68e-05 | 0.471 | ATGGCAATTTAAAGCAAAAT |
MX000154 | OxyR | strain | - | 20792 | 20825 | 2.68e-05 | 0.0503 | TGTTTTCTTATAATTATACAATAATTAACAAAAT |
MX000159 | Crp | strain | - | 6923 | 6932 | 2.69e-05 | 1 | GTAACCGATT |
MX000156 | MngR | strain | + | 13694 | 13707 | 2.7e-05 | 0.247 | TAGTACAAATACTA |
MX000054 | MntR | strain | + | 3834 | 3853 | 2.7e-05 | 0.359 | AAATTTTTCTATGGGAAACC |
MX000154 | OxyR | strain | - | 18687 | 18720 | 2.7e-05 | 0.0503 | CTGCTTCTTTTATTCTATCAATATTTACTGTTTT |
MX000009 | ResD | strain | - | 20021 | 20041 | 2.71e-05 | 0.0543 | CATTTGTAAATTATTTAAGTA |
MX000041 | CovR | strain | + | 17876 | 17891 | 2.73e-05 | 0.0455 | TCATCATTAAAAGACC |
MX000062 | RocR | strain | - | 15230 | 15250 | 2.74e-05 | 0.252 | AACACCACATAATCTTGTATT |
MX000050 | Hpr | strain | - | 2706 | 2724 | 2.74e-05 | 0.068 | TAAAATATAATAGCATAAA |
MX000057 | PhoP | strain | + | 17381 | 17411 | 2.74e-05 | 0.0227 | AAAAATATATTCAAAATTTTATTAATAATAG |
MX000044 | CitT | strain | - | 6225 | 6249 | 2.74e-05 | 0.16 | CTTTAAGTACTAAATGGTTTAAAAA |
MX000094 | CysB | strain | + | 2391 | 2421 | 2.76e-05 | 0.108 | AATTTGATTATGAAAAAGCAAAGCCATTATT |
MX000102 | Dnr | strain | + | 13636 | 13649 | 2.77e-05 | 0.394 | TTGATTCCAATAAA |
MX000094 | CysB | strain | - | 1337 | 1367 | 2.77e-05 | 0.108 | ATAGCGGTTTCTTTAAAAGCATCTTATAAAT |
MX000115 | AraC | strain | - | 3195 | 3223 | 2.77e-05 | 0.325 | TCTGCCTGTGATTTGTCGGAAAATCCTGT |
MX000009 | ResD | strain | - | 1897 | 1917 | 2.78e-05 | 0.0543 | AATTTTTTATTTTTTAAACCA |
MX000013 | Fur | strain | + | 4614 | 4632 | 2.78e-05 | 0.143 | CATGACTATAATCATTTTA |
MX000013 | Fur | strain | - | 1582 | 1600 | 2.78e-05 | 0.143 | GAAATTGAGGATAAATCTC |
MX000198 | YrzC | strain | + | 4826 | 4849 | 2.78e-05 | 0.0852 | TAATGAGAAGGCTGATTGGAGGAG |
MX000060 | PrfA | strain | - | 102 | 115 | 2.78e-05 | 0.3 | TTTACTTGAGTTAA |
MX000043 | AhrC | strain | - | 13095 | 13110 | 2.79e-05 | 0.0739 | ATGTATATTCATTAAG |
MX000045 | CodY | strain | + | 4996 | 5060 | 2.79e-05 | 0.0158 | CTCCTTTCAAGGAGGCTTAACAGATGATATTAGAAGTAGATGGAATAGAATTCAGATATATAAGC |
MX000185 | XylR | strain | - | 3733 | 3765 | 2.81e-05 | 0.0474 | CATAATAACAATCAGCAATTGCTGTATCAATAT |
MX000059 | PurR | strain | - | 2104 | 2123 | 2.81e-05 | 0.202 | CTGTTTCACGAATATTATTC |
MX000076 | SigH | strain | - | 16914 | 16925 | 2.82e-05 | 0.128 | ACAGGATATATA |
MX000045 | CodY | strain | + | 17389 | 17453 | 2.82e-05 | 0.0158 | ATTCAAAATTTTATTAATAATAGCTGTTATATTGTATATAGGAAAAGTTTCATTTAATGCAATAA |
MX000045 | CodY | strain | - | 2475 | 2539 | 2.82e-05 | 0.0158 | ATTCAATAATTATAAGCGATATATTTATTAAATTATATTTTTAACTTAATTGAATTATATACTTA |
MX000057 | PhoP | strain | + | 12985 | 13015 | 2.82e-05 | 0.0227 | TGTTAAAATATCAAAAAATCAGTATAAAATT |
MX000028 | IHF | strain | - | 7005 | 7018 | 2.83e-05 | 0.177 | TATTCAATATATTT |
MX000062 | RocR | strain | + | 7202 | 7222 | 2.83e-05 | 0.252 | TATGGAAAATTATATTTCATG |
MX000107 | OxyR | strain | - | 15014 | 15050 | 2.83e-05 | 0.17 | TTTTATTTTTTCACTTTGATTTGTTACCTCTTTCATT |
MX000056 | MtrB | strain | - | 5004 | 5059 | 2.84e-05 | 0.0923 | CTTATATATCTGAATTCTATTCCATCTACTTCTAATATCATCTGTTAAGCCTCCTT |
MX000164 | Lrp | strain | - | 19412 | 19436 | 2.84e-05 | 0.658 | TGCAATGAGTACCTTCACCTGTGGT |
MX000082 | SigW | strain | - | 16063 | 16095 | 2.84e-05 | 0.14 | AATACAAGTTCTGCCGCTTCTTTTACATCTTCT |
MX000063 | SenS | strain | - | 17513 | 17533 | 2.84e-05 | 0.407 | ATTTCTGATGATGTATGCATC |
MX000050 | Hpr | strain | - | 12981 | 12999 | 2.85e-05 | 0.068 | TTTGATATTTTAACACAAA |
MX000116 | ArgR | strain | - | 19396 | 19409 | 2.86e-05 | 0.16 | TGTATGTATATTCA |
MX000150 | NagC | strain | - | 18694 | 18716 | 2.86e-05 | 0.0869 | TTCTTTTATTCTATCAATATTTA |
MX000188 | SarA | strain | + | 1404 | 1419 | 2.86e-05 | 0.0186 | AATTGAATTTTAAATA |
MX000188 | SarA | strain | + | 17177 | 17192 | 2.86e-05 | 0.0186 | AATTAATATTATATAT |
MX000172 | RhaR | strain | - | 15176 | 15226 | 2.87e-05 | 0.305 | AACGTTTAATATTAAGGCTTTTTTCATCTTCTCCTGTCCAACTATTGCGCA |
MX000175 | SdiA | strain | + | 2300 | 2329 | 2.87e-05 | 0.204 | ATTGAAGAAATCAGTAGAAAAAATTATTCT |
MX000057 | PhoP | strain | + | 17293 | 17323 | 2.88e-05 | 0.0227 | TATGTAAAATATTAATTTATGCTTAAAAACT |
MX000128 | Fur | strain | - | 4008 | 4026 | 2.88e-05 | 0.139 | TAAAATTATAAAAATTTTT |
MX000072 | SigB | strain | + | 20794 | 20826 | 2.88e-05 | 0.202 | TTTGTTAATTATTGTATAATTATAAGAAAACAT |
MX000121 | CytR | strain | - | 17938 | 17949 | 2.88e-05 | 0.436 | GCCAAATTTGGA |
MX000154 | OxyR | strain | + | 2496 | 2529 | 2.88e-05 | 0.0503 | TTAAAAATATAATTTAATAAATATATCGCTTATA |
MX000043 | AhrC | strain | + | 10232 | 10247 | 2.88e-05 | 0.0739 | AGGAACTTTTATTCAT |
MX000150 | NagC | strain | + | 19365 | 19387 | 2.9e-05 | 0.0869 | GTCATTCCTTTTAATAAAAAAAC |
MX000043 | AhrC | strain | + | 3596 | 3611 | 2.9e-05 | 0.0739 | TATTATTTTTATTGAT |
MX000138 | MalI | strain | + | 2086 | 2099 | 2.91e-05 | 0.354 | GATTAAACGTGATA |
MX000138 | MalI | strain | + | 17462 | 17475 | 2.91e-05 | 0.354 | GATAAAACGGCTTT |
MX000193 | KdgR | strain | + | 2634 | 2651 | 2.91e-05 | 0.42 | TTTAAAACTGTTTTCAGG |
MX000035 | AlgU | strain | - | 14111 | 14120 | 2.92e-05 | 0.29 | GGGAACTTGC |
MX000073 | SigB | strain | - | 16091 | 16122 | 2.93e-05 | 0.103 | AAGGGTTTCTTTCTCATTCTATGCGGTAATAC |
MX000045 | CodY | strain | + | 2472 | 2536 | 2.95e-05 | 0.0158 | ATTTAAGTATATAATTCAATTAAGTTAAAAATATAATTTAATAAATATATCGCTTATAATTATTG |
MX000167 | DegU | strain | - | 8285 | 8304 | 2.95e-05 | 0.317 | AAAACAGGTATAACATTCAG |
MX000057 | PhoP | strain | - | 5782 | 5812 | 2.96e-05 | 0.0227 | TATTTTTTAAATTTAAATCTCTTTTTAATAT |
MX000185 | XylR | strain | + | 18073 | 18105 | 2.97e-05 | 0.0474 | AATTGAAAAAAATGGCAATTTAAAGCAAAATAA |
MX000044 | CitT | strain | + | 11111 | 11135 | 2.98e-05 | 0.16 | GGGCAGAAACGGCACGGTTATAAGG |
MX000030 | DegU | strain | + | 5378 | 5396 | 2.98e-05 | 0.274 | AGAAAAATTAAACCTACAG |
MX000045 | CodY | strain | + | 18424 | 18488 | 2.99e-05 | 0.0158 | TTTAAATAATATAAAATATCCTGTTTTTAAGGAGGTAATTGTAAAAGCAGAAAATGATAAAATAG |
MX000109 | TrpI | strain | - | 14568 | 14590 | 2.99e-05 | 0.232 | CTTTGCAATTATATCGGTTTTTT |
MX000109 | TrpI | strain | - | 20916 | 20938 | 2.99e-05 | 0.232 | TTTGGTAAGTTTAGCGTCTTGTT |
MX000050 | Hpr | strain | - | 18607 | 18625 | 3e-05 | 0.068 | ATATTTTTTTTTATATCTT |
MX000064 | SigB | strain | + | 19028 | 19039 | 3e-05 | 0.156 | AAGGTTTAAAAA |
MX000118 | CynR | strain | + | 12085 | 12138 | 3.01e-05 | 0.169 | CATATTACAGATTCCAGACGATTTCATAGTAGGTGTAAGTGATACCGTCCAAAC |
MX000057 | PhoP | strain | - | 10034 | 10064 | 3.02e-05 | 0.0227 | GTTCTTCACAAATAAATTTTTCTTTCAATAT |
MX000188 | SarA | strain | - | 14142 | 14157 | 3.02e-05 | 0.0191 | ATAAATATATATAATT |
MX000056 | MtrB | strain | - | 3879 | 3934 | 3.02e-05 | 0.0923 | CTAAATTCATATTAGATATTTTATTGACCTAAGGTTATCTGTTTAAAGCCACCCGA |
MX000056 | MtrB | strain | - | 11494 | 11549 | 3.02e-05 | 0.0923 | AAAATCCTCCTTAAAGTTTTAATTTTATTCCCCAAGCTTTGCTTTTACTTCTTTCA |
MX000198 | YrzC | strain | - | 1422 | 1445 | 3.02e-05 | 0.0852 | TAACACATAATATTCTTGGAATCA |
MX000094 | CysB | strain | - | 16546 | 16576 | 3.02e-05 | 0.108 | TAATCGATATTGCAAGCCCTTCTTTATCACG |
MX000155 | OxyR | strain | + | 15134 | 15179 | 3.03e-05 | 0.322 | AGAAAAATGAGGAGGAATTTATATAATATGTATTATCCATTTTGCG |
MX000009 | ResD | strain | + | 4024 | 4044 | 3.03e-05 | 0.0543 | TTATTGTGTGCACTTTTTGTT |
MX000013 | Fur | strain | - | 14171 | 14189 | 3.04e-05 | 0.143 | GAACATACCAATCATAATC |
MX000009 | ResD | strain | - | 12985 | 13005 | 3.05e-05 | 0.0543 | TGATTTTTTGATATTTTAACA |
MX000045 | CodY | strain | - | 18020 | 18084 | 3.05e-05 | 0.0158 | TTTTTTTCAATTGGTTCTGTAGTGATTTTACTCAACATTTCAGAAGTCAAATTATACATTTTTTT |
MX000045 | CodY | strain | - | 18910 | 18974 | 3.05e-05 | 0.0158 | CTTTTCTCCCGCAACATTAACTTCAACAAGACAATCCATAATAAGATTCTTTTGTTTTGCTCTTT |
MX000198 | YrzC | strain | + | 19665 | 19688 | 3.05e-05 | 0.0852 | AATTCAATATACAATTTGTCTAAA |
MX000150 | NagC | strain | - | 923 | 945 | 3.05e-05 | 0.0869 | GGTTTTTTATCATTAGAAATATT |
MX000017 | CTSR | strain | + | 2485 | 2501 | 3.06e-05 | 0.173 | ATTCAATTAAGTTAAAA |
MX000017 | CTSR | strain | + | 3941 | 3957 | 3.06e-05 | 0.173 | AGATAAAAAAAGTGAAA |
MX000009 | ResD | strain | - | 3335 | 3355 | 3.06e-05 | 0.0543 | ACTTTCTGTGCTCTTGTTTCA |
MX000045 | CodY | strain | + | 2463 | 2527 | 3.07e-05 | 0.0158 | ATGTAATGAATTTAAGTATATAATTCAATTAAGTTAAAAATATAATTTAATAAATATATCGCTTA |
MX000039 | RofA | strain | - | 17247 | 17263 | 3.09e-05 | 0.0879 | ATTTTAAAAAAAATAAA |
MX000088 | Xre | strain | - | 2817 | 2839 | 3.09e-05 | 0.094 | GTAATGATAACAATTGTAAGCAA |
MX000140 | LexA | strain | - | 17784 | 17799 | 3.09e-05 | 0.33 | CTGTTATTTTTAACAG |
MX000154 | OxyR | strain | - | 19812 | 19845 | 3.09e-05 | 0.0508 | CTATTATAACAAATTTAGAAATCGGATTTGCCAT |
MX000049 | GltR | strain | - | 19819 | 19833 | 3.1e-05 | 0.164 | ATTTAGAAATCGGAT |
MX000012 | LasR | strain | - | 17008 | 17023 | 3.1e-05 | 0.246 | CTTCCTTTTTTACCAG |
MX000068 | SigE | strain | - | 1847 | 1883 | 3.12e-05 | 0.173 | TCATGAATACTGTCTATATCTGTTGAATAAGGCTTTA |
MX000050 | Hpr | strain | + | 1362 | 1380 | 3.12e-05 | 0.068 | CGCTATATAAAGATATTTC |
MX000050 | Hpr | strain | - | 17983 | 18001 | 3.12e-05 | 0.068 | ATATTTATCAAAGTAAAAA |
MX000088 | Xre | strain | + | 16004 | 16026 | 3.13e-05 | 0.094 | ATAATGATGAAGACAGCATCAAC |
MX000209 | NtcA | strain | + | 1982 | 1995 | 3.13e-05 | 0.32 | GTATTAATTTCTAC |
MX000056 | MtrB | strain | - | 15046 | 15101 | 3.16e-05 | 0.0923 | ATAAGCTTCTCCTACTTTTTGTAATTCGCCTTTCCCCTGAACGGCTTGCCCTTTTA |
MX000166 | RcsB | strain | + | 11312 | 11326 | 3.16e-05 | 0.242 | TTGGAGGCTCATCAG |
MX000166 | RcsB | strain | + | 11868 | 11882 | 3.16e-05 | 0.242 | TTGATGTTGCACCTG |
MX000057 | PhoP | strain | - | 17168 | 17198 | 3.16e-05 | 0.0227 | ACGTTTATATATAATATTAATTTTTACAATG |
MX000039 | RofA | strain | - | 19005 | 19021 | 3.17e-05 | 0.0879 | ATTTTAATAAAATCAAT |
MX000098 | DnaA | strain | + | 1587 | 1595 | 3.18e-05 | 0.34 | TTATCCTCA |
MX000150 | NagC | strain | - | 19576 | 19598 | 3.18e-05 | 0.0869 | GATTTTTTTTATCTCACCATTAA |
MX000038 | CovR | strain | - | 2374 | 2384 | 3.19e-05 | 0.123 | TATTATTAAAA |
MX000066 | SigE | strain | - | 8027 | 8037 | 3.19e-05 | 0.348 | TGTAATATTTC |
MX000099 | PhoB | strain | - | 18521 | 18536 | 3.19e-05 | 0.239 | TGTCATACATTTTTAT |
MX000045 | CodY | strain | + | 2645 | 2709 | 3.2e-05 | 0.0158 | TTTCAGGTATTAAAAATAATTTGTATCATAATTATTTGTATACTATTGATTTAATTTTTAATTTA |
MX000172 | RhaR | strain | + | 2786 | 2836 | 3.21e-05 | 0.305 | ATCATCACAATTTAAGTTTTTTGTTGTTGCATTGCTTACAATTGTTATCAT |
MX000056 | MtrB | strain | - | 17733 | 17788 | 3.21e-05 | 0.0923 | AACAGCATTCTGATATTTTTCCTCTTCTTTTTTAATTAAATTTTCAAGATTTTCTA |
MX000083 | SigX | strain | + | 16483 | 16494 | 3.22e-05 | 0.225 | AGGGAAACTAAT |
MX000160 | RcsA-RcsB | strain | + | 9769 | 9782 | 3.22e-05 | 0.282 | TGGGGATATTCCTG |
MX000041 | CovR | strain | - | 1408 | 1423 | 3.22e-05 | 0.0508 | CAATTATTTAAAATTC |
MX000070 | SigE | strain | - | 2725 | 2761 | 3.22e-05 | 0.226 | AAAATTTATTTTCAGATAATATATTGATACTATCTTT |
MX000057 | PhoP | strain | - | 5759 | 5789 | 3.22e-05 | 0.0227 | TTTAATATTTTATATCGCTTATAACGGAACA |
MX000065 | SigD | strain | + | 19104 | 19146 | 3.23e-05 | 0.206 | TTTAAAAAAATGAAAGAATTATTTGACAACCTCAAAAATGTAT |
MX000135 | YhiX | strain | - | 2498 | 2515 | 3.23e-05 | 0.064 | TTATTAAATTATATTTTT |
MX000052 | LevR | strain | + | 18238 | 18250 | 3.24e-05 | 0.515 | AGATGTTTTAAAA |
MX000026 | TnrA | strain | + | 19048 | 19064 | 3.24e-05 | 0.334 | TAAAAGGATTAATGACA |
MX000045 | CodY | strain | - | 17849 | 17913 | 3.25e-05 | 0.0158 | TTCTGATTTTTTAAATCCTCAAGGTCTTTTAATGATGAAGGTCCCTTATTTATAATCTGTTCTTT |
MX000188 | SarA | strain | + | 14144 | 14159 | 3.25e-05 | 0.0199 | TTATATATATTTATTT |
MX000075 | SigB | strain | - | 5398 | 5427 | 3.25e-05 | 0.462 | TTAATTCATCTAAATATCGCAGTGCAAATT |
MX000050 | Hpr | strain | - | 20017 | 20035 | 3.26e-05 | 0.068 | TAAATTATTTAAGTATAAT |
MX000038 | CovR | strain | + | 7035 | 7045 | 3.28e-05 | 0.123 | GGATATTAAAA |
MX000134 | IciA | strain | - | 9368 | 9379 | 3.28e-05 | 0.295 | AGATAATGCAAC |
MX000057 | PhoP | strain | - | 17403 | 17433 | 3.29e-05 | 0.0227 | TTTCCTATATACAATATAACAGCTATTATTA |
MX000024 | CcpC | strain | + | 17643 | 17657 | 3.29e-05 | 0.302 | ATAAAAATAAATTAA |
MX000016 | Fur | strain | + | 2774 | 2796 | 3.29e-05 | 0.0364 | TATGAAAAACATATCATCACAAT |
MX000045 | CodY | strain | + | 222 | 286 | 3.3e-05 | 0.0158 | GATTGGAAATCTAAAATACAAGAAATCAAGGGAAAACTAGAAAAAGAAAATTAAAGATTATAGAG |
MX000045 | CodY | strain | + | 2672 | 2736 | 3.3e-05 | 0.0158 | ATAATTATTTGTATACTATTGATTTAATTTTTAATTTATGCTATTATATTTTAAAAGATAGTATC |
MX000045 | CodY | strain | + | 2689 | 2753 | 3.3e-05 | 0.0158 | ATTGATTTAATTTTTAATTTATGCTATTATATTTTAAAAGATAGTATCAATATATTATCTGAAAA |
MX000027 | GlnR | strain | + | 7813 | 7829 | 3.31e-05 | 0.18 | TCTTATATTCTTTTACA |
MX000057 | PhoP | strain | + | 18426 | 18456 | 3.32e-05 | 0.0227 | TAAATAATATAAAATATCCTGTTTTTAAGGA |
MX000154 | OxyR | strain | - | 19253 | 19286 | 3.32e-05 | 0.0508 | TTAATTCCCCTCCATCTTATATAATCTTTTCCCA |
MX000039 | RofA | strain | - | 6742 | 6758 | 3.32e-05 | 0.0879 | TTATTCCAAAATTCAAT |
MX000082 | SigW | strain | - | 18538 | 18570 | 3.32e-05 | 0.14 | TTTGAAACATAATCCTTGCCATTCACAGCTACC |
MX000039 | RofA | strain | + | 5622 | 5638 | 3.33e-05 | 0.0879 | TTTTCTAACAAATTTCT |
MX000174 | SoxS | strain | - | 4048 | 4067 | 3.33e-05 | 0.291 | ATTGCATATACTGACAAAAC |
MX000057 | PhoP | strain | - | 18591 | 18621 | 3.35e-05 | 0.0227 | TTTTTTTTATATCTTCTATATTTTCTAATAT |
MX000008 | GlpR | strain | - | 6161 | 6180 | 3.35e-05 | 0.644 | TATGTTCAATTTTCCCAATT |
MX000053 | LicT | strain | + | 13029 | 13057 | 3.36e-05 | 0.243 | GTTCTTGCAAGTATAATTTGTGCTAAACC |
MX000086 | SinR | strain | + | 138 | 157 | 3.37e-05 | 1 | GGTTGGATGGAAGAAAACAT |
MX000004 | Fnr | strain | + | 18050 | 18063 | 3.37e-05 | 0.221 | TTGAGTAAAATCAC |
MX000078 | SigL | strain | + | 263 | 315 | 3.38e-05 | 0.114 | AAAAGAAAATTAAAGATTATAGAGGGAGAGAGATCTTGAATGAAAAAGAAGAT |
MX000132 | FliA | strain | - | 1774 | 1800 | 3.38e-05 | 0.735 | TAATCTATCACCTTTCACTTCCAATAA |
MX000198 | YrzC | strain | - | 15228 | 15251 | 3.38e-05 | 0.0867 | AAACACCACATAATCTTGTATTAA |
MX000088 | Xre | strain | - | 2363 | 2385 | 3.38e-05 | 0.094 | TTATTATTAAAATAAGAATCATT |
MX000162 | Mlc | strain | + | 14980 | 15000 | 3.39e-05 | 0.601 | AGATTTTGCCAAGTGAATTAA |
MX000037 | RpoE-SigE | strain | + | 6703 | 6733 | 3.4e-05 | 0.42 | TTTAATATGAGGAAAAAAATTCGCACTGAAA |
MX000135 | YhiX | strain | - | 15197 | 15214 | 3.4e-05 | 0.064 | TAAGGCTTTTTTCATCTT |
MX000088 | Xre | strain | + | 2330 | 2352 | 3.41e-05 | 0.094 | TTAATTATAAGTAAAGTATTGCA |
MX000091 | ArcA | strain | + | 17785 | 17794 | 3.42e-05 | 0.35 | TGTTAAAAAT |
MX000058 | PucR | strain | - | 12454 | 12464 | 3.42e-05 | 0.585 | TAACCTTGTTT |
MX000049 | GltR | strain | - | 1404 | 1418 | 3.42e-05 | 0.164 | ATTTAAAATTCAATT |
MX000045 | CodY | strain | + | 2474 | 2538 | 3.43e-05 | 0.0161 | TTAAGTATATAATTCAATTAAGTTAAAAATATAATTTAATAAATATATCGCTTATAATTATTGAA |
MX000053 | LicT | strain | + | 11229 | 11257 | 3.43e-05 | 0.243 | GGACTTTTATTCTCAATGAAGAAAACCGC |
MX000063 | SenS | strain | + | 8298 | 8318 | 3.43e-05 | 0.407 | CTGTTTTTTGTTATTCTGTTA |
MX000043 | AhrC | strain | - | 800 | 815 | 3.43e-05 | 0.0762 | AAACATTTTTATCAAA |
MX000142 | OmpR | strain | - | 8454 | 8463 | 3.44e-05 | 0.156 | GTTTCTTTTT |
MX000054 | MntR | strain | - | 8761 | 8780 | 3.45e-05 | 0.359 | TATTTAGCATAAAAGCTACT |
MX000108 | PhhR | strain | + | 16451 | 16468 | 3.46e-05 | 0.979 | GGTCAGGAAGATATGTCA |
MX000161 | NagC | strain | - | 5484 | 5506 | 3.46e-05 | 1 | GTCGGTTCGTCCAACAAAAGTAC |
MX000185 | XylR | strain | + | 12990 | 13022 | 3.47e-05 | 0.0525 | AAATATCAAAAAATCAGTATAAAATTAATATTT |
MX000049 | GltR | strain | - | 18341 | 18355 | 3.47e-05 | 0.164 | ATTTAAAATTAAATT |
MX000019 | Spo0A | strain | - | 14696 | 14707 | 3.48e-05 | 0.374 | ATTGTCAAAAGC |
MX000057 | PhoP | strain | - | 2706 | 2736 | 3.48e-05 | 0.0229 | GATACTATCTTTTAAAATATAATAGCATAAA |
MX000148 | ModE | strain | - | 3283 | 3305 | 3.48e-05 | 0.403 | AGATTTATAAAAGTCTTCATCAA |
MX000053 | LicT | strain | - | 17578 | 17606 | 3.48e-05 | 0.243 | CTTTTGGCACCCTTTCTCCGCTTAAAACC |
MX000200 | MelR | strain | - | 20185 | 20202 | 3.49e-05 | 0.256 | CTATCTTTTAAATCGGAA |
MX000004 | Fnr | strain | - | 18769 | 18782 | 3.49e-05 | 0.221 | TGGATATTTATCAC |
MX000009 | ResD | strain | - | 8141 | 8161 | 3.49e-05 | 0.0552 | ATTTTCTCTATAATTTTTATA |
MX000018 | CtsR | strain | + | 3941 | 3958 | 3.49e-05 | 0.848 | AGATAAAAAAAGTGAAAC |
MX000088 | Xre | strain | - | 610 | 632 | 3.5e-05 | 0.094 | TTATAGGTAAATTTTTTAGCTGA |
MX000029 | Fis | strain | + | 19458 | 19472 | 3.5e-05 | 0.405 | GCACAAAATATATGC |
MX000188 | SarA | strain | - | 1902 | 1917 | 3.51e-05 | 0.0199 | AATTTTTTATTTTTTA |
MX000092 | CaiF | strain | + | 2963 | 3008 | 3.51e-05 | 0.105 | TCCTGTAAATAGGGTTGTAGGTTTGACCAGTGCTTTAAGATTCATT |
MX000096 | Lrp | strain | - | 914 | 927 | 3.51e-05 | 0.179 | ATATTTTTTATTCT |
MX000045 | CodY | strain | - | 2520 | 2584 | 3.52e-05 | 0.0161 | CATTTTTTAAGTAATTCCAATTTTAGTTAGCAATAATTAAAGTTGATTCAATAATTATAAGCGAT |
MX000163 | Lrp | strain | - | 29 | 53 | 3.52e-05 | 0.576 | CCGCCGAGTAATTTCTTCCAGCGCC |
MX000062 | RocR | strain | - | 4696 | 4716 | 3.54e-05 | 0.252 | TACACCAAGTCCTTTTGCGGT |
MX000028 | IHF | strain | + | 17388 | 17401 | 3.55e-05 | 0.177 | TATTCAAAATTTTA |
MX000175 | SdiA | strain | + | 2719 | 2748 | 3.55e-05 | 0.204 | ATTTTAAAAGATAGTATCAATATATTATCT |
MX000009 | ResD | strain | + | 1433 | 1453 | 3.57e-05 | 0.0552 | ATATTATGTGTTATTATTTTA |
MX000010 | IHF | strain | + | 6590 | 6597 | 3.58e-05 | 0.701 | CAATGGAT |
MX000010 | IHF | strain | + | 19516 | 19523 | 3.58e-05 | 0.701 | CAATGGAT |
MX000121 | CytR | strain | + | 20179 | 20190 | 3.58e-05 | 0.436 | GGAAAATTCCGA |
MX000078 | SigL | strain | - | 9457 | 9509 | 3.59e-05 | 0.114 | TGGTTTGCATATGATCAACGAGTGTGGCATAACTCCTCCTTTTGGCTATGGTT |
MX000170 | Rob | strain | - | 4048 | 4067 | 3.59e-05 | 0.471 | ATTGCATATACTGACAAAAC |
MX000020 | AraR | strain | - | 14122 | 14137 | 3.59e-05 | 0.186 | TTTTGTACGTCTTCCT |
MX000135 | YhiX | strain | - | 18616 | 18633 | 3.59e-05 | 0.064 | TTAACTTTATATTTTTTT |
MX000193 | KdgR | strain | + | 18254 | 18271 | 3.6e-05 | 0.42 | TATAAAACGGATGGCAAA |
MX000116 | ArgR | strain | + | 2287 | 2300 | 3.61e-05 | 0.173 | TGAATGTAAATTAA |
MX000109 | TrpI | strain | - | 15866 | 15888 | 3.62e-05 | 0.234 | TGCCTTAATTCTTCCTGCTTCTC |
MX000043 | AhrC | strain | - | 19010 | 19025 | 3.63e-05 | 0.0762 | AAGCATTTTAATAAAA |
MX000050 | Hpr | strain | + | 18284 | 18302 | 3.63e-05 | 0.0702 | ATTATTAATATGATAGATA |
MX000044 | CitT | strain | + | 6015 | 6039 | 3.63e-05 | 0.17 | GGAGGGAAACCAGCCGTATCTAAAA |
MX000154 | OxyR | strain | - | 2361 | 2394 | 3.63e-05 | 0.0508 | AATTCTCCTTTATTATTAAAATAAGAATCATTTT |
MX000185 | XylR | strain | - | 20771 | 20803 | 3.65e-05 | 0.0525 | AATTAACAAAATTCGTCAACAATTTATGTTGTT |
MX000045 | CodY | strain | - | 17170 | 17234 | 3.66e-05 | 0.0162 | GCTTTATATTGCAAAACACTTGCCTTTTATATCTATACGTTTATATATAATATTAATTTTTACAA |
MX000045 | CodY | strain | - | 20000 | 20064 | 3.66e-05 | 0.0162 | AACATTTTATCCACTCCTATCTTCATTTGTAAATTATTTAAGTATAATCTATTTTAATAAGTTAA |
MX000085 | SigX | strain | - | 5564 | 5596 | 3.67e-05 | 0.302 | ATTATAACAATTGCAGCAATATTTTCCTCTTCT |
MX000137 | LacI | strain | + | 19578 | 19598 | 3.67e-05 | 0.74 | AATGGTGAGATAAAAAAAATC |
MX000154 | OxyR | strain | - | 19197 | 19230 | 3.68e-05 | 0.0508 | TAATATTTGCTCCTTCCTCAATAGCAACTTTATA |
MX000082 | SigW | strain | - | 9625 | 9657 | 3.69e-05 | 0.14 | TTGTCAAGATTTGTACGTTTTATTTCATCTATT |
MX000019 | Spo0A | strain | + | 19679 | 19690 | 3.69e-05 | 0.374 | TTTGTCTAAATA |
MX000188 | SarA | strain | + | 19477 | 19492 | 3.7e-05 | 0.0199 | AATTAAAAAATAAAAA |
MX000100 | RpoN | strain | + | 17186 | 17234 | 3.7e-05 | 0.213 | TATATATAAACGTATAGATATAAAAGGCAAGTGTTTTGCAATATAAAGC |
MX000150 | NagC | strain | + | 13953 | 13975 | 3.71e-05 | 0.091 | GTTAATTCTTCAAAGGAAGATAA |
MX000016 | Fur | strain | + | 5363 | 5385 | 3.71e-05 | 0.0395 | AGTAAACAGGGTTTTAGAAAAAT |
MX000013 | Fur | strain | - | 322 | 340 | 3.74e-05 | 0.154 | AAGAACAAAAATCATTAAA |
MX000183 | TrpR | strain | + | 18868 | 18887 | 3.74e-05 | 1 | TTTATTCCTTAGATAGTATG |
MX000156 | MngR | strain | + | 3921 | 3934 | 3.75e-05 | 0.247 | TAATATGAATTTAG |
MX000156 | MngR | strain | - | 4385 | 4398 | 3.75e-05 | 0.247 | AAATGCAAATATAA |
MX000081 | SigW | strain | + | 3076 | 3085 | 3.75e-05 | 0.609 | TAACGTATAA |
MX000080 | SigW | strain | + | 3844 | 3855 | 3.76e-05 | 0.195 | ATGGGAAACCTT |
MX000124 | FadR | strain | + | 218 | 234 | 3.76e-05 | 0.799 | AGCTGATTGGAAATCTA |
MX000088 | Xre | strain | + | 19581 | 19603 | 3.77e-05 | 0.094 | GGTGAGATAAAAAAAATCTCAAA |
MX000111 | RpoN | strain | - | 14728 | 14773 | 3.77e-05 | 0.527 | ATACCATCTCCTTCTAACCTTTGATATGACACTTGATATTCCTGCC |
MX000182 | TyrR | strain | + | 4153 | 4170 | 3.77e-05 | 0.727 | TGGAATATAAGATTGCCG |
MX000088 | Xre | strain | + | 12156 | 12178 | 3.78e-05 | 0.094 | TGAATAATAAACAAAATATCGGA |
MX000209 | NtcA | strain | - | 8228 | 8241 | 3.78e-05 | 0.32 | GTATTGTTATTTAC |
MX000174 | SoxS | strain | + | 18467 | 18486 | 3.79e-05 | 0.291 | AAAGCAGAAAATGATAAAAT |
MX000188 | SarA | strain | + | 5775 | 5790 | 3.79e-05 | 0.0199 | ATATAAAATATTAAAA |
MX000048 | GltC | strain | + | 1222 | 1236 | 3.81e-05 | 0.148 | ATTTAATTATTATAC |
MX000048 | GltC | strain | + | 18423 | 18437 | 3.81e-05 | 0.148 | TTTTAAATAATATAA |
MX000039 | RofA | strain | + | 11262 | 11278 | 3.82e-05 | 0.0906 | TTTTCAAAGAAAACAAC |
MX000140 | LexA | strain | + | 12030 | 12045 | 3.83e-05 | 0.33 | CTGCAGGTTTAAACAG |
MX000094 | CysB | strain | - | 17692 | 17722 | 3.83e-05 | 0.122 | ATATGGATTATTAGAAGCATTATTTTTGATT |
MX000142 | OmpR | strain | - | 9567 | 9576 | 3.84e-05 | 0.156 | TTTTCATATT |
MX000142 | OmpR | strain | - | 17997 | 18006 | 3.84e-05 | 0.156 | TTTTCATATT |
MX000188 | SarA | strain | - | 20025 | 20040 | 3.84e-05 | 0.0199 | ATTTGTAAATTATTTA |
MX000065 | SigD | strain | + | 18564 | 18606 | 3.84e-05 | 0.206 | TTTCAAAATAGGGGTGAGGATATGGACATATTAGAAAATATAG |
MX000082 | SigW | strain | - | 5564 | 5596 | 3.86e-05 | 0.14 | ATTATAACAATTGCAGCAATATTTTCCTCTTCT |
MX000165 | MarA | strain | - | 19929 | 19948 | 3.87e-05 | 0.23 | ATTACAATTATTGCTAAAAT |
MX000073 | SigB | strain | + | 17575 | 17606 | 3.87e-05 | 0.103 | AATGGTTTTAAGCGGAGAAAGGGTGCCAAAAG |
MX000019 | Spo0A | strain | + | 8482 | 8493 | 3.87e-05 | 0.374 | TTTGTTGAAAGA |
MX000135 | YhiX | strain | - | 20419 | 20436 | 3.87e-05 | 0.064 | ATATTCAATTTCTTTTTT |
MX000027 | GlnR | strain | - | 7204 | 7220 | 3.87e-05 | 0.18 | TGAAATATAATTTTCCA |
MX000045 | CodY | strain | - | 17371 | 17435 | 3.88e-05 | 0.0165 | CTTTTCCTATATACAATATAACAGCTATTATTAATAAAATTTTGAATATATTTTTTCCCATATAA |
MX000074 | SigB | strain | - | 6898 | 6928 | 3.89e-05 | 0.143 | CCGATTTTACTCTTTTTGCAAACGGTATTGC |
MX000118 | CynR | strain | - | 3599 | 3652 | 3.89e-05 | 0.169 | TCTTTTTGATAATCCTGTTTAACTAATGGTAAACCACCCTCATCAATAAAAATA |
MX000057 | PhoP | strain | - | 14983 | 15013 | 3.89e-05 | 0.0236 | TGTATAACCTTTTTTAATTCACTTGGCAAAA |
MX000154 | OxyR | strain | - | 17023 | 17056 | 3.89e-05 | 0.0508 | CCTTTTCAACATCGATAACAATAGATTTTATCTC |
MX000185 | XylR | strain | - | 2679 | 2711 | 3.9e-05 | 0.0535 | CATAAATTAAAAATTAAATCAATAGTATACAAA |
MX000073 | SigB | strain | + | 18164 | 18195 | 3.91e-05 | 0.103 | GATGATTATAAATTAATAAAAGAAGGAGAAAA |
MX000009 | ResD | strain | + | 17291 | 17311 | 3.92e-05 | 0.0552 | TCTATGTAAAATATTAATTTA |
MX000028 | IHF | strain | - | 6736 | 6749 | 3.93e-05 | 0.177 | AATTCAATATCTTC |
MX000073 | SigB | strain | + | 3657 | 3688 | 3.93e-05 | 0.103 | AAGTTTTATCAATCCTTAAAGGCGGTAAAAGA |
MX000107 | OxyR | strain | + | 810 | 846 | 3.93e-05 | 0.193 | ATGTTTACACATCATTGCAGATAATAGGTAAAGTAAT |
MX000050 | Hpr | strain | + | 15123 | 15141 | 3.93e-05 | 0.0709 | ATATTTATAATAGAAAAAT |
MX000056 | MtrB | strain | - | 17263 | 17318 | 3.93e-05 | 0.0976 | TTAAGCATAAATTAATATTTTACATAGAAAACTCTACTATACCAATTCTACCACAA |
MX000188 | SarA | strain | - | 2502 | 2517 | 3.93e-05 | 0.0199 | ATTTATTAAATTATAT |
MX000088 | Xre | strain | + | 13690 | 13712 | 3.94e-05 | 0.094 | TTAATAGTACAAATACTATGGAA |
MX000160 | RcsA-RcsB | strain | + | 16617 | 16630 | 3.95e-05 | 0.282 | TGGGAATTTTATTG |
MX000208 | PrrA | strain | + | 9080 | 9095 | 3.95e-05 | 1 | TGGGGCAATCCGCCGG |
MX000156 | MngR | strain | - | 19606 | 19619 | 3.96e-05 | 0.247 | TACTAAAAATATAA |
MX000056 | MtrB | strain | - | 18449 | 18504 | 3.96e-05 | 0.0976 | TTATTTTCAATTATTGCTATTTTATCATTTTCTGCTTTTACAATTACCTCCTTAAA |
MX000059 | PurR | strain | - | 3078 | 3097 | 3.96e-05 | 0.227 | CTATATGCCGTATTATACGT |
MX000057 | PhoP | strain | - | 5793 | 5823 | 3.96e-05 | 0.0236 | CCTATAATTTTTATTTTTTAAATTTAAATCT |
MX000198 | YrzC | strain | - | 4724 | 4747 | 3.96e-05 | 0.0919 | ACATACCTATTAATCTTATTCTTT |
MX000072 | SigB | strain | + | 3381 | 3413 | 3.98e-05 | 0.224 | AAGGATTTAAATGACAGGACAAAAGGGATTCCA |
MX000098 | DnaA | strain | - | 9013 | 9021 | 3.98e-05 | 0.34 | TCATCCACA |
MX000188 | SarA | strain | - | 914 | 929 | 3.99e-05 | 0.0199 | AAATATTTTTTATTCT |
MX000188 | SarA | strain | + | 17178 | 17193 | 3.99e-05 | 0.0199 | ATTAATATTATATATA |
MX000076 | SigH | strain | + | 5164 | 5175 | 3.99e-05 | 0.161 | ACAGGATTTTAA |
MX000034 | AlgU | strain | - | 12543 | 12574 | 3.99e-05 | 0.838 | GGCAACATTTATCCCACCGGCTGCTTCTAATC |
MX000057 | PhoP | strain | - | 17163 | 17193 | 4e-05 | 0.0236 | TATATATAATATTAATTTTTACAATGATTCT |
MX000057 | PhoP | strain | + | 18414 | 18444 | 4e-05 | 0.0236 | GGGTATTTATTTTAAATAATATAAAATATCC |
MX000154 | OxyR | strain | + | 17388 | 17421 | 4e-05 | 0.0508 | TATTCAAAATTTTATTAATAATAGCTGTTATATT |
MX000045 | CodY | strain | - | 20247 | 20311 | 4e-05 | 0.0165 | GGCATTTTGCTTCAATCCTTCGGCTGTATTTTGAGCAACAATTAGAGTATTGTTTAATGTCTTTT |
MX000068 | SigE | strain | - | 19986 | 20022 | 4.01e-05 | 0.173 | TATAATCTATTTTAATAAGTTAACCCATAAACATTAA |
MX000045 | CodY | strain | - | 18778 | 18842 | 4.01e-05 | 0.0165 | TTTAACCTTATTCGTCTGTAAATGTCCAATAAAATGGAAATTAGTCAAATCTTTTAAATATGGAT |
MX000095 | MhpR | strain | + | 4321 | 4337 | 4.02e-05 | 1 | GGAGCAGGCAGTGCACA |
MX000041 | CovR | strain | + | 2370 | 2385 | 4.02e-05 | 0.0581 | CTTATTTTAATAATAA |
MX000118 | CynR | strain | - | 2528 | 2581 | 4.03e-05 | 0.169 | TTTTTAAGTAATTCCAATTTTAGTTAGCAATAATTAAAGTTGATTCAATAATTA |
MX000118 | CynR | strain | - | 17404 | 17457 | 4.03e-05 | 0.169 | CCTGTTATTGCATTAAATGAAACTTTTCCTATATACAATATAACAGCTATTATT |
MX000119 | CpxR | strain | + | 2869 | 2884 | 4.04e-05 | 0.61 | AGCAAAAACAGGAAAC |
MX000023 | ComK | strain | - | 17298 | 17310 | 4.04e-05 | 0.135 | AAATTAATATTTT |
MX000099 | PhoB | strain | - | 7963 | 7978 | 4.05e-05 | 0.253 | TGTTATATAGCTATAA |
MX000029 | Fis | strain | + | 14874 | 14888 | 4.05e-05 | 0.405 | GATGAAGAATTCAAC |
MX000150 | NagC | strain | + | 12153 | 12175 | 4.05e-05 | 0.091 | GTTTGAATAATAAACAAAATATC |
MX000048 | GltC | strain | + | 1411 | 1425 | 4.06e-05 | 0.148 | TTTTAAATAATTGAT |
MX000057 | PhoP | strain | + | 4640 | 4670 | 4.07e-05 | 0.0236 | TTGTTTATTTCATGTTTAACAGATGGAATTA |
MX000079 | SigW | strain | + | 13518 | 13549 | 4.08e-05 | 0.287 | AATGAAACATTAGAAGAAAATCCTCTTGCAGC |
MX000118 | CynR | strain | + | 2479 | 2532 | 4.08e-05 | 0.169 | TATATAATTCAATTAAGTTAAAAATATAATTTAATAAATATATCGCTTATAATT |
MX000151 | NhaR | strain | + | 20986 | 20996 | 4.08e-05 | 0.295 | TACTAAAAAAA |
MX000149 | Nac | strain | - | 1556 | 1566 | 4.08e-05 | 0.184 | ATCTGAAAAAC |
MX000164 | Lrp | strain | - | 30 | 54 | 4.09e-05 | 0.658 | GCCGCCGAGTAATTTCTTCCAGCGC |
MX000176 | YdiH | strain | + | 20565 | 20586 | 4.1e-05 | 0.341 | CTTGTGAAAAATAGAAAAACAT |
MX000039 | RofA | strain | - | 13571 | 13587 | 4.11e-05 | 0.0906 | CTTTTGCCAAAAATGAT |
MX000163 | Lrp | strain | - | 16350 | 16374 | 4.12e-05 | 0.576 | TCTTACGGAAAATTCTTCTCCTATC |
MX000070 | SigE | strain | + | 7057 | 7093 | 4.12e-05 | 0.241 | GAAAATGGTTTTGACCTTGTATTTGCCTCTATGACAC |
MX000188 | SarA | strain | - | 2692 | 2707 | 4.13e-05 | 0.0199 | AATTAAAAATTAAATC |
MX000023 | ComK | strain | + | 7207 | 7219 | 4.15e-05 | 0.135 | AAAATTATATTTC |
MX000080 | SigW | strain | + | 17530 | 17541 | 4.17e-05 | 0.195 | AAATGAAACGAT |
MX000029 | Fis | strain | + | 12153 | 12167 | 4.18e-05 | 0.405 | GTTTGAATAATAAAC |
MX000065 | SigD | strain | - | 18415 | 18457 | 4.18e-05 | 0.206 | CTCCTTAAAAACAGGATATTTTATATTATTTAAAATAAATACC |
MX000179 | XapR | strain | - | 12900 | 12912 | 4.19e-05 | 0.528 | CCAAGCCATTTTT |
MX000045 | CodY | strain | - | 18982 | 19046 | 4.2e-05 | 0.0165 | TCTTATATTTTTAAACCTTTCAAGCATTTTAATAAAATCAATCGTATCATCCGGTAATACCCCAT |
MX000045 | CodY | strain | - | 20027 | 20091 | 4.2e-05 | 0.0165 | TCCTTATTATGTATATCCATAGGTGTTAACATTTTATCCACTCCTATCTTCATTTGTAAATTATT |
MX000092 | CaiF | strain | - | 16143 | 16188 | 4.2e-05 | 0.105 | TGCTTTTGCTGTTGCTGTTCTTTTAATGTCTGTTCCAATTTTTCTT |
MX000045 | CodY | strain | + | 2445 | 2509 | 4.2e-05 | 0.0165 | ATCCAGTTAATGTTAGTAATGTAATGAATTTAAGTATATAATTCAATTAAGTTAAAAATATAATT |
MX000210 | NtcA | strain | - | 2811 | 2824 | 4.21e-05 | 0.423 | GTAAGCAATGCAAC |
MX000045 | CodY | strain | + | 1372 | 1436 | 4.22e-05 | 0.0165 | AGATATTTCAGAAAAATTAGGTGGATTTGAACAATTGAATTTTAAATAATTGATTCCAAGAATAT |
MX000009 | ResD | strain | - | 883 | 903 | 4.22e-05 | 0.0552 | TCTTGCTGACATTTTTCAAGA |
MX000154 | OxyR | strain | + | 2678 | 2711 | 4.23e-05 | 0.0513 | ATTTGTATACTATTGATTTAATTTTTAATTTATG |
MX000088 | Xre | strain | + | 6579 | 6601 | 4.23e-05 | 0.094 | GATAAGATAATCAATGGATTAAA |
MX000038 | CovR | strain | + | 20469 | 20479 | 4.23e-05 | 0.143 | GTCAATTAGAA |
MX000075 | SigB | strain | - | 1846 | 1875 | 4.23e-05 | 0.462 | ACTGTCTATATCTGTTGAATAAGGCTTTAT |
MX000061 | PyrR | strain | + | 15638 | 15656 | 4.24e-05 | 0.276 | GGTGTAAACATTGTAGAGA |
MX000185 | XylR | strain | - | 2643 | 2675 | 4.24e-05 | 0.0555 | TTATGATACAAATTATTTTTAATACCTGAAAAC |
MX000103 | ExsA | strain | + | 14505 | 14543 | 4.25e-05 | 0.308 | CACTTATTGCTTTAAAGAAAAAATTAATTGAAGCTGAGG |
MX000064 | SigB | strain | - | 684 | 695 | 4.25e-05 | 0.156 | CAGGTTTAACAT |
MX000182 | TyrR | strain | - | 11419 | 11436 | 4.25e-05 | 0.727 | TGAAACTCTCCCTTTACA |
MX000028 | IHF | strain | - | 2461 | 2474 | 4.25e-05 | 0.177 | AATTCATTACATTA |
MX000133 | GntR | strain | - | 8047 | 8062 | 4.25e-05 | 1 | AGGGTCCGCATAATCA |
MX000057 | PhoP | strain | - | 20790 | 20820 | 4.27e-05 | 0.0239 | TCTTATAATTATACAATAATTAACAAAATTC |
MX000041 | CovR | strain | - | 3598 | 3613 | 4.27e-05 | 0.0581 | TCATCAATAAAAATAA |
MX000203 | DevR | strain | - | 9080 | 9093 | 4.28e-05 | 0.898 | GGCGGATTGCCCCA |
MX000107 | OxyR | strain | + | 3801 | 3837 | 4.29e-05 | 0.193 | ATAGACCCTGCTAAAAAGGCGGATGAAATATACAAAT |
MX000188 | SarA | strain | + | 20878 | 20893 | 4.29e-05 | 0.0199 | TATTTTTTTTAAAAAA |
MX000073 | SigB | strain | + | 16582 | 16613 | 4.3e-05 | 0.103 | AAGGATATAAGAGAAAAAGTAAGGGAAAAAAA |
MX000069 | SigE | strain | - | 17644 | 17679 | 4.3e-05 | 0.214 | TTATTTATATCATCTAATTCTTTTAATTTATTTTTA |
MX000135 | YhiX | strain | - | 18861 | 18878 | 4.3e-05 | 0.064 | TAAGGAATAAATCATTTT |
MX000094 | CysB | strain | + | 1390 | 1420 | 4.3e-05 | 0.123 | AGGTGGATTTGAACAATTGAATTTTAAATAA |
MX000009 | ResD | strain | - | 8425 | 8445 | 4.31e-05 | 0.0552 | TCATTTTTCCCACTTTCTAAA |
MX000057 | PhoP | strain | - | 17251 | 17281 | 4.31e-05 | 0.0239 | TATACCAATTCTACCACAATTTTAAAAAAAA |
MX000082 | SigW | strain | - | 8821 | 8853 | 4.31e-05 | 0.141 | CGGGCAACACTTTCCAATGTATCTAAGTTTGCT |
MX000043 | AhrC | strain | + | 4008 | 4023 | 4.32e-05 | 0.0762 | AAAAATTTTTATAATT |
MX000150 | NagC | strain | - | 13926 | 13948 | 4.33e-05 | 0.091 | GCTTTTTCAGGGTTCGCTGATTT |
MX000135 | YhiX | strain | - | 6998 | 7015 | 4.34e-05 | 0.064 | TCAATATATTTATATTTT |
MX000190 | FNRL | strain | + | 2202 | 2215 | 4.34e-05 | 0.391 | TTGATGAGTTTGAA |
MX000035 | AlgU | strain | - | 14043 | 14052 | 4.35e-05 | 0.345 | CGGAACTTCC |
MX000055 | Mta | strain | - | 1567 | 1588 | 4.35e-05 | 1 | AAATCTCAAGTTGCATTATTTC |
MX000146 | MetJ | strain | + | 11200 | 11215 | 4.36e-05 | 1 | AGATGACTGGATTTTT |
MX000073 | SigB | strain | + | 4039 | 4070 | 4.36e-05 | 0.103 | TTTGTTTTAGTTTTGTCAGTATATGCAATAAA |
MX000083 | SigX | strain | + | 3858 | 3869 | 4.36e-05 | 0.254 | TATGAAACATTA |
MX000128 | Fur | strain | + | 17566 | 17584 | 4.36e-05 | 0.181 | AATAAAGAAAATGGTTTTA |
MX000130 | GalS | strain | - | 6296 | 6309 | 4.37e-05 | 0.492 | TGACACCTCTTCCA |
MX000103 | ExsA | strain | + | 17068 | 17106 | 4.37e-05 | 0.308 | ACTTTTGGACTTGCAAAAGAAATTGCAGACCTAATGGAT |
MX000142 | OmpR | strain | + | 18720 | 18729 | 4.38e-05 | 0.156 | GTTTCATTTG |
MX000210 | NtcA | strain | + | 1982 | 1995 | 4.38e-05 | 0.423 | GTATTAATTTCTAC |
MX000123 | DeoR | strain | - | 191 | 206 | 4.38e-05 | 0.139 | TGTTATAATATCAATA |
MX000181 | Crp | strain | - | 20811 | 20832 | 4.38e-05 | 0.19 | TTTATGATGTTTTCTTATAATT |
MX000045 | CodY | strain | + | 8416 | 8480 | 4.4e-05 | 0.0165 | GTCCTTCTTTTTAGAAAGTGGGAAAAATGAATTCGATAAAAAAGAAACGGCTTGTAAAGGTGTAT |
MX000045 | CodY | strain | - | 14460 | 14524 | 4.4e-05 | 0.0165 | TTTCTTTAAAGCAATAAGTGAGGTTTCAGGAATGTCCTTGTTCTGATAAAGTTTTATCAATATTT |
MX000068 | SigE | strain | - | 3896 | 3932 | 4.41e-05 | 0.173 | AAATTCATATTAGATATTTTATTGACCTAAGGTTATC |
MX000085 | SigX | strain | + | 993 | 1025 | 4.42e-05 | 0.302 | AATGTAAATATCCTCCTTTTATAGCTGTCAATG |
MX000199 | CovR | strain | + | 2505 | 2513 | 4.43e-05 | 0.0819 | TAATTTAAT |
MX000199 | CovR | strain | + | 3599 | 3607 | 4.43e-05 | 0.0819 | TATTTTTAT |
MX000199 | CovR | strain | - | 13972 | 13980 | 4.43e-05 | 0.0819 | TATTTTTAT |
MX000199 | CovR | strain | - | 17643 | 17651 | 4.43e-05 | 0.0819 | TATTTTTAT |
MX000045 | CodY | strain | - | 2694 | 2758 | 4.43e-05 | 0.0165 | ATTTATTTTCAGATAATATATTGATACTATCTTTTAAAATATAATAGCATAAATTAAAAATTAAA |
MX000105 | GlpR | strain | + | 17067 | 17086 | 4.44e-05 | 0.396 | AACTTTTGGACTTGCAAAAG |
MX000064 | SigB | strain | - | 1308 | 1319 | 4.44e-05 | 0.156 | CAGGTTTAATAT |
MX000064 | SigB | strain | - | 19972 | 19983 | 4.44e-05 | 0.156 | CAAGTTTTACAA |
MX000175 | SdiA | strain | + | 7038 | 7067 | 4.44e-05 | 0.204 | TATTAAAAAAGAAGGGCTTGAAAATGGTTT |
MX000160 | RcsA-RcsB | strain | + | 14353 | 14366 | 4.44e-05 | 0.282 | AAAGAAAATTCCCG |
MX000175 | SdiA | strain | - | 17732 | 17761 | 4.45e-05 | 0.204 | TTTTTTAATTAAATTTTCAAGATTTTCTAT |
MX000103 | ExsA | strain | + | 19096 | 19134 | 4.46e-05 | 0.308 | GACCTTATTTTAAAAAAATGAAAGAATTATTTGACAACC |
MX000154 | OxyR | strain | - | 12185 | 12218 | 4.49e-05 | 0.0522 | TTACTGACATGATTTTTTCAATAGTAGGTGTTTG |
MX000185 | XylR | strain | + | 15879 | 15911 | 4.5e-05 | 0.056 | AATTAAGGCAAAAGATTGTAAATGCCAAAAAAC |
MX000050 | Hpr | strain | - | 8394 | 8412 | 4.5e-05 | 0.0746 | AGCTTTATCATGGCATTAA |
MX000181 | Crp | strain | - | 98 | 119 | 4.51e-05 | 0.19 | TTCCTTTACTTGAGTTAACATT |
MX000018 | CtsR | strain | + | 4352 | 4369 | 4.51e-05 | 0.848 | AGTCAATAATCATCAATA |
MX000156 | MngR | strain | - | 1974 | 1987 | 4.51e-05 | 0.247 | TAATACAACTGGAA |
MX000156 | MngR | strain | + | 15007 | 15020 | 4.51e-05 | 0.247 | TTATACAAATGAAA |
MX000188 | SarA | strain | + | 4011 | 4026 | 4.51e-05 | 0.0199 | AATTTTTATAATTTTA |
MX000016 | Fur | strain | - | 15211 | 15233 | 4.52e-05 | 0.0463 | TATTAACAACGTTTAATATTAAG |
MX000079 | SigW | strain | + | 17531 | 17562 | 4.53e-05 | 0.287 | AATGAAACGATTATAGATTCACCTATTACAGG |
MX000060 | PrfA | strain | - | 5012 | 5025 | 4.54e-05 | 0.324 | ATATCATCTGTTAA |
MX000148 | ModE | strain | - | 1925 | 1947 | 4.54e-05 | 0.403 | GGCTCTATTACCATTTACAAAAC |
MX000027 | GlnR | strain | - | 17171 | 17187 | 4.55e-05 | 0.18 | TAATATTAATTTTTACA |
MX000057 | PhoP | strain | - | 19021 | 19051 | 4.55e-05 | 0.0244 | TTTATTCTTATATTTTTAAACCTTTCAAGCA |
MX000056 | MtrB | strain | - | 12375 | 12430 | 4.56e-05 | 0.098 | ATCAGCTACAAGTGCTATTTTCTCTGCTTTCCATTGTATAAACTCATCTGCTGTCT |
MX000062 | RocR | strain | + | 20933 | 20953 | 4.57e-05 | 0.252 | ACCAAAAACTGATTTTCCAAT |
MX000135 | YhiX | strain | - | 16278 | 16295 | 4.59e-05 | 0.064 | TCATCAGTTTTTTTTTAT |
MX000198 | YrzC | strain | + | 9843 | 9866 | 4.6e-05 | 0.0919 | TATCACTAAGAAAAGTAGTAGCAA |
MX000198 | YrzC | strain | + | 13000 | 13023 | 4.6e-05 | 0.0919 | AAATCAGTATAAAATTAATATTTG |
MX000039 | RofA | strain | + | 7614 | 7630 | 4.61e-05 | 0.0906 | TTTTTACTAATAATCTT |
MX000039 | RofA | strain | - | 14225 | 14241 | 4.61e-05 | 0.0906 | GTTTTACTTAAAATCAT |
MX000119 | CpxR | strain | + | 20750 | 20765 | 4.62e-05 | 0.61 | AGTAAAAGTACGTTCG |
MX000180 | HydG | strain | + | 8875 | 8930 | 4.62e-05 | 0.464 | GATCGGTTATAATGTAGACCCTCCTGCTGATGGTAAAGAATTAATTGAAACGATTA |
MX000009 | ResD | strain | + | 4011 | 4031 | 4.65e-05 | 0.0552 | AATTTTTATAATTTTATTGTG |
MX000096 | Lrp | strain | + | 1580 | 1593 | 4.65e-05 | 0.179 | TTGAGATTTATCCT |
MX000175 | SdiA | strain | + | 15128 | 15157 | 4.66e-05 | 0.204 | TATAATAGAAAAATGAGGAGGAATTTATAT |
MX000175 | SdiA | strain | + | 19226 | 19255 | 4.66e-05 | 0.204 | TATTATACGTATAGGAACAGGTATTTTTGG |
MX000135 | YhiX | strain | - | 18430 | 18447 | 4.66e-05 | 0.064 | ACAGGATATTTTATATTA |
MX000041 | CovR | strain | - | 1899 | 1914 | 4.66e-05 | 0.0581 | TTTTTATTTTTTAAAC |
MX000188 | SarA | strain | + | 17174 | 17189 | 4.68e-05 | 0.0199 | AAAAATTAATATTATA |
MX000188 | SarA | strain | + | 18334 | 18349 | 4.68e-05 | 0.0199 | AAAAGTAAATTTAATT |
Command line:
fimo --oc . --verbosity 1 --thresh 1.0E-4 prodoric.meme 26.fasta
Settings:
output_directory = . | MEME file name = prodoric.meme | sequence file name = 26.fasta |
background file name = --nrdb-- | alphabet = DNA | max stored scores = 100000 |
allow clobber = true | compute q-values = true | parse genomic coord. = false |
text only = false | scan both strands = true | max strand = false |
threshold type = p-value | output theshold = 0.0001 | pseudocount = 0.1 |
alpha = 1 | verbosity = 1 |
This information can be useful in the event you wish to report a problem with the FIMO software.