define mjg c.n4,a.n6,t.o4,g.o6,g.n7,a.n7,t.c5m,c.c5,g.c8,a.c8,t.c6,c.c6,g.c5,a.c5 define mig c.o2,t.o2,g.n3,g.n2,a.n3,a.c2 define tocompl t.o4,t.n3,c.n4,c.n3,c.o2,g.o6,g.n1,g.n2,a.n6,a.n1 define basen c.c2,c.c4,c.n1,t.c4,t.c2,t.c5,t.n1,g.c2,g.c4,g.n9,g.c6,a.c4,a.n9,a.c6 define base mjg,mig,tocompl,basen define sugar (*.O5*,*.C5*,*.C4*,*.O4*,*.C3*,*.O3*,*.C2*,*.C1*) and not protein define phosacid (*.P,*.O1P,*.O2P) define base2 dna and not backbone define polard (oxygen,nitrogen) and dna define hydroph carbon and dna restrict none zoom 200 select within (3.5, polar) and sugar and polard cpk 200 color orange select within (3.5, selected) and polar cpk 200 color blue echo Polar, with sugar pause restrict none select within (4.5, hydrophobic) and sugar and hydroph cpk 200 color orange select within (4.5, selected) and hydrophobic cpk 200 color blue echo hydrophobic, with sugar Pause restrict none select within (3.5, polar) and *.O?P cpk 200 color orange select within (3.5, selected) and polar cpk 200 color blue echo polar, with phosphacid Pause restrict none select within (4.5, hydrophobic) and phosphorus and dna cpk 200 color orange select within (4.5, selected) and hydrophobic cpk 200 color blue echo hydrophobic, with phosphacid Pause restrict none select within (3.5, polar) and mjg and polard cpk 200 color orange select within (3.5, selected) and polar cpk 200 color blue echo polar, with mjg Pause restrict none select within (4.5, hydrophobic) and mjg and hydroph cpk 200 color orange select within (4.5, selected) and hydrophobic cpk 200 color blue echo hydrophpbic, with mjg Pause restrict none select within (3.5, polar) and mig and polard cpk 200 color orange select within (3.5,selected) and polar cpk 200 color blue echo polar, with mig Pause restrict none select within (4.5, hydrophobic) and mig and hydroph cpk 200 color orange select within (4.5, selected) and hydrophobic cpk 200 color blue echo hydrophobic, with mig