Учебный сайт Птицыной Елены

Cтудентки первого курса факультета биоинженерии и биоинформатики Московского государственного университета имени М.В. Ломоносова

Семестр 3, практикум 8

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Нуклеотидные банки данных

В этом практикуме мы учились использовать нуклеотидные банки данных. На этой страницы содержатся приложения к

Заданию 1.

 

Sequences producing significant alignments


 KR084900.1	Modiolus modiolus voucher MT04964 cytochrome oxidase subunit 1 (COI) gene, partial cds; mitochondrial	1170	1170	98%	0.0	98.48%	KR084900.1
 KX713479.1	Modiolus modiolus voucher BivAToL-197 cytochrome c oxidase subunit I (COI) gene, partial cds; mitochondrial	1168	1168	98%	0.0	98.48%	KX713479.1
 KX821782.1	Modiolus modiolus mitochondrion, complete genome	1166	1166	100%	0.0	98.05%	KX821782.1
 KT307121.1	Modiolus modiolus voucher 2015_UNE_AC_002 cytochrome oxidase subunit 1 (COI) gene, partial cds; mitochondrial	1164	1164	98%	0.0	98.33%	KT307121.1
 HM884246.1	Modiolus modiolus voucher SOP0042 cytochrome oxidase subunit 1 (COI) gene, partial cds; mitochondrial	1164	1164	98%	0.0	98.33%	HM884246.1
 KC119380.1	Modiolus modiolus isolate Mo45 cytochrome c oxidase subunit 1 (CO1) gene, partial cds; mitochondrial	1086	1086	89%	0.0	99.16%	KC119380.1
 KX781838.1	Modiolus modiolus voucher 16_DHS_007B cytochrome oxidase subunit 1 (COI) gene, partial cds; mitochondrial	1072	1072	90%	0.0	98.51%	KX781838.1
 KX901459.1	Modiolus modiolus isolate MM3.1 cytochrome oxidase subunit 1 (cox1) gene, partial cds; mitochondrial	1072	1072	91%	0.0	98.04%	KX901459.1
 KX452401.1	Modiolus modiolus isolate MM4 cytochrome oxidase subunit 1 (cox1) gene, partial cds; mitochondrial	1072	1072	91%	0.0	98.04%	KX452401.1
 KC119372.1	Modiolus modiolus isolate Mo37 cytochrome c oxidase subunit 1 (CO1) gene, partial cds; mitochondrial	1064	1064	89%	0.0	98.49%	KC119372.1
 KC119340.1	Modiolus modiolus isolate Mo5 cytochrome c oxidase subunit 1 (CO1) gene, partial cds; mitochondrial	1059	1059	89%	0.0	98.33%	KC119340.1
 KC119387.1	Modiolus modiolus isolate Mo52 cytochrome c oxidase subunit 1 (CO1) gene, partial cds; mitochondrial	1053	1053	89%	0.0	98.16%	KC119387.1
 KC119386.1	Modiolus modiolus isolate Mo51 cytochrome c oxidase subunit 1 (CO1) gene, partial cds; mitochondrial	1053	1053	89%	0.0	98.16%	KC119386.1
 KC119385.1	Modiolus modiolus isolate Mo50 cytochrome c oxidase subunit 1 (CO1) gene, partial cds; mitochondrial	1053	1053	89%	0.0	98.16%	KC119385.1
 KC119384.1	Modiolus modiolus isolate Mo49 cytochrome c oxidase subunit 1 (CO1) gene, partial cds; mitochondrial	1053	1053	89%	0.0	98.16%	KC119384.1
 KC119383.1	Modiolus modiolus isolate Mo48 cytochrome c oxidase subunit 1 (CO1) gene, partial cds; mitochondrial	1053	1053	89%	0.0	98.16%	KC119383.1
 KC119381.1	Modiolus modiolus isolate Mo46 cytochrome c oxidase subunit 1 (CO1) gene, partial cds; mitochondrial	1053	1053	89%	0.0	98.16%	KC119381.1
 KC119377.1	Modiolus modiolus isolate Mo42 cytochrome c oxidase subunit 1 (CO1) gene, partial cds; mitochondrial	1053	1053	89%	0.0	98.16%	KC119377.1
 KC119376.1	Modiolus modiolus isolate Mo41 cytochrome c oxidase subunit 1 (CO1) gene, partial cds; mitochondrial	1053	1053	89%	0.0	98.16%	KC119376.1
 KC119375.1	Modiolus modiolus isolate Mo40 cytochrome c oxidase subunit 1 (CO1) gene, partial cds; mitochondrial	1053	1053	89%	0.0	98.16%	KC119375.1
 KC119373.1	Modiolus modiolus isolate Mo38 cytochrome c oxidase subunit 1 (CO1) gene, partial cds; mitochondrial	1053	1053	89%	0.0	98.16%	KC119373.1
 KC119371.1	Modiolus modiolus isolate Mo36 cytochrome c oxidase subunit 1 (CO1) gene, partial cds; mitochondrial	1053	1053	89%	0.0	98.16%	KC119371.1
 KC119370.1	Modiolus modiolus isolate Mo35 cytochrome c oxidase subunit 1 (CO1) gene, partial cds; mitochondrial	1053	1053	89%	0.0	98.16%	KC119370.1
 KC119369.1	Modiolus modiolus isolate Mo34 cytochrome c oxidase subunit 1 (CO1) gene, partial cds; mitochondrial	1053	1053	89%	0.0	98.16%	KC119369.1
 KC119368.1	Modiolus modiolus isolate Mo33 cytochrome c oxidase subunit 1 (CO1) gene, partial cds; mitochondrial	1053	1053	89%	0.0	98.16%	KC119368.1
 KC119364.1	Modiolus modiolus isolate Mo29 cytochrome c oxidase subunit 1 (CO1) gene, partial cds; mitochondrial	1053	1053	89%	0.0	98.16%	KC119364.1
 KC119363.1	Modiolus modiolus isolate Mo28 cytochrome c oxidase subunit 1 (CO1) gene, partial cds; mitochondrial	1053	1053	89%	0.0	98.16%	KC119363.1
 KC119362.1	Modiolus modiolus isolate Mo27 cytochrome c oxidase subunit 1 (CO1) gene, partial cds; mitochondrial	1053	1053	89%	0.0	98.16%	KC119362.1
 KC119347.1	Modiolus modiolus isolate Mo12 cytochrome c oxidase subunit 1 (CO1) gene, partial cds; mitochondrial	1053	1053	89%	0.0	98.16%	KC119347.1
 KC119346.1	Modiolus modiolus isolate Mo11 cytochrome c oxidase subunit 1 (CO1) gene, partial cds; mitochondrial	1053	1053	89%	0.0	98.16%	KC119346.1
 KC119341.1	Modiolus modiolus isolate Mo6 cytochrome c oxidase subunit 1 (CO1) gene, partial cds; mitochondrial	1053	1053	89%	0.0	98.16%	KC119341.1
 KC119338.1	Modiolus modiolus isolate Mo3 cytochrome c oxidase subunit 1 (CO1) gene, partial cds; mitochondrial	1053	1053	89%	0.0	98.16%	KC119338.1
 KC119382.1	Modiolus modiolus isolate Mo47 cytochrome c oxidase subunit 1 (CO1) gene, partial cds; mitochondrial	1048	1048	89%	0.0	97.99%	KC119382.1
 KC119379.1	Modiolus modiolus isolate Mo44 cytochrome c oxidase subunit 1 (CO1) gene, partial cds; mitochondrial	1048	1048	89%	0.0	97.99%	KC119379.1
 KC119378.1	Modiolus modiolus isolate Mo43 cytochrome c oxidase subunit 1 (CO1) gene, partial cds; mitochondrial	1048	1048	89%	0.0	97.99%	KC119378.1
 KC119344.1	Modiolus modiolus isolate Mo9 cytochrome c oxidase subunit 1 (CO1) gene, partial cds; mitochondrial	1048	1048	89%	0.0	97.99%	KC119344.1
 KC119343.1	Modiolus modiolus isolate Mo8 cytochrome c oxidase subunit 1 (CO1) gene, partial cds; mitochondrial	1048	1048	89%	0.0	97.99%	KC119343.1
 KC119342.1	Modiolus modiolus isolate Mo7 cytochrome c oxidase subunit 1 (CO1) gene, partial cds; mitochondrial	1048	1048	89%	0.0	97.99%	KC119342.1
 KC119339.1	Modiolus modiolus isolate Mo4 cytochrome c oxidase subunit 1 (CO1) gene, partial cds; mitochondrial	1048	1048	89%	0.0	97.99%	KC119339.1
 KC119336.1	Modiolus modiolus isolate Mo1 cytochrome c oxidase subunit 1 (CO1) gene, partial cds; mitochondrial	1048	1048	89%	0.0	97.99%	KC119336.1
 KC119367.1	Modiolus modiolus isolate Mo32 cytochrome c oxidase subunit 1 (CO1) gene, partial cds; mitochondrial	1042	1042	89%	0.0	97.83%	KC119367.1
 KC119365.1	Modiolus modiolus isolate Mo30 cytochrome c oxidase subunit 1 (CO1) gene, partial cds; mitochondrial	1042	1042	89%	0.0	97.83%	KC119365.1
 KC119345.1	Modiolus modiolus isolate Mo10 cytochrome c oxidase subunit 1 (CO1) gene, partial cds; mitochondrial	1042	1042	89%	0.0	97.83%	KC119345.1
 KC119337.1	Modiolus modiolus isolate Mo2 cytochrome c oxidase subunit 1 (CO1) gene, partial cds; mitochondrial	1042	1042	89%	0.0	97.83%	KC119337.1
 KC119374.1	Modiolus modiolus isolate Mo39 cytochrome c oxidase subunit 1 (CO1) gene, partial cds; mitochondrial	1037	1037	89%	0.0	97.66%	KC119374.1
 KC119366.1	Modiolus modiolus isolate Mo31 cytochrome c oxidase subunit 1 (CO1) gene, partial cds; mitochondrial	1037	1037	89%	0.0	97.66%	KC119366.1
 U56848.1	Modiolus modiolus cytochrome c oxidase subunit I gene, mitochondrial gene encoding mitochondrial protein, partial cds	1035	1035	92%	0.0	96.90%	U56848.1
 FJ890501.1	Modiolus modiolus cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial	1026	1026	86%	0.0	98.61%	FJ890501.1
 MH242852.1	Modiolus modiolus voucher BMBM-0479 cytochrome oxidase subunit 1 (COI) gene, partial cds; mitochondrial	876	876	99%	0.0	90.44%	MH242852.1
 MH242851.1	Modiolus modiolus voucher BMBM-0783 cytochrome oxidase subunit 1 (COI) gene, partial cds; mitochondrial	819	819	93%	0.0	90.32%	MH242851.1
 KY242717.1	Modiolus kurilensis mitochondrion, complete genome	817	817	100%	0.0	88.57%	KY242717.1
 MN119671.1	Modiolus kurilensis isolate SCH2019_BIVALVE_COI_052 cytochrome oxidase subunit I gene, partial cds; mitochondrial	811	811	100%	0.0	88.42%	MN119671.1
 KC119359.1	Modiolus modiolus isolate Mo24 cytochrome c oxidase subunit 1 (CO1) gene, partial cds; mitochondrial	798	798	89%	0.0	90.47%	KC119359.1
 KC119358.1	Modiolus modiolus isolate Mo23 cytochrome c oxidase subunit 1 (CO1) gene, partial cds; mitochondrial	793	793	89%	0.0	90.30%	KC119358.1
 KC119352.1	Modiolus modiolus isolate Mo17 cytochrome c oxidase subunit 1 (CO1) gene, partial cds; mitochondrial	787	787	89%	0.0	90.13%	KC119352.1
 KC119361.1	Modiolus modiolus isolate Mo26 cytochrome c oxidase subunit 1 (CO1) gene, partial cds; mitochondrial	782	782	89%	0.0	89.97%	KC119361.1
 KP243074.1	Modiolus kurilensis isolate ZG6423 cytochrome oxidase subunit 1 (COI) gene, partial cds; mitochondrial	778	778	96%	0.0	88.30%	KP243074.1
 KC119357.1	Modiolus modiolus isolate Mo22 cytochrome c oxidase subunit 1 (CO1) gene, partial cds; mitochondrial	776	776	89%	0.0	89.80%	KC119357.1
 KC119356.1	Modiolus modiolus isolate Mo21 cytochrome c oxidase subunit 1 (CO1) gene, partial cds; mitochondrial	776	776	89%	0.0	89.80%	KC119356.1
 KC119353.1	Modiolus modiolus isolate Mo18 cytochrome c oxidase subunit 1 (CO1) gene, partial cds; mitochondrial	776	776	89%	0.0	89.80%	KC119353.1
 KC119360.1	Modiolus modiolus isolate Mo25 cytochrome c oxidase subunit 1 (CO1) gene, partial cds; mitochondrial	771	771	89%	0.0	89.63%	KC119360.1
 KC119350.1	Modiolus modiolus isolate Mo15 cytochrome c oxidase subunit 1 (CO1) gene, partial cds; mitochondrial	771	771	89%	0.0	89.63%	KC119350.1
 KC119354.1	Modiolus modiolus isolate Mo19 cytochrome c oxidase subunit 1 (CO1) gene, partial cds; mitochondrial	765	765	89%	0.0	89.46%	KC119354.1
 KC119351.1	Modiolus modiolus isolate Mo16 cytochrome c oxidase subunit 1 (CO1) gene, partial cds; mitochondrial	765	765	89%	0.0	89.46%	KC119351.1
 KC119348.1	Modiolus modiolus isolate Mo13 cytochrome c oxidase subunit 1 (CO1) gene, partial cds; mitochondrial	765	765	89%	0.0	89.46%	KC119348.1
 KC119355.1	Modiolus modiolus isolate Mo20 cytochrome c oxidase subunit 1 (CO1) gene, partial cds; mitochondrial	760	760	89%	0.0	89.30%	KC119355.1
 KC119349.1	Modiolus modiolus isolate Mo14 cytochrome c oxidase subunit 1 (CO1) gene, partial cds; mitochondrial	760	760	89%	0.0	89.30%	KC119349.1
 KP243078.1	Modiolus kurilensis isolate ZB08151207 cytochrome oxidase subunit 1 (COI) gene, partial cds; mitochondrial	737	737	92%	0.0	87.99%	KP243078.1
 KP243077.1	Modiolus kurilensis isolate ZB08151206 cytochrome oxidase subunit 1 (COI) gene, partial cds; mitochondrial	737	737	92%	0.0	87.99%	KP243077.1
 KP243079.1	Modiolus kurilensis isolate ZB08151208 cytochrome oxidase subunit 1 (COI) gene, partial cds; mitochondrial	732	732	92%	0.0	87.82%	KP243079.1
 KP243075.1	Modiolus kurilensis isolate ZB08151204 cytochrome oxidase subunit 1 (COI) gene, partial cds; mitochondrial	732	732	92%	0.0	87.82%	KP243075.1
 KP243076.1	Modiolus kurilensis isolate ZB08151205 cytochrome oxidase subunit 1 (COI) gene, partial cds; mitochondrial	726	726	92%	0.0	87.66%	KP243076.1
 GQ480313.1	Modiolus comptus isolate MoC-2 voucher LSGB41210-2 cytochrome c oxidase subunit I (COI) gene, partial cds; mitochondrial	536	536	96%	5e-148	81.42%	GQ480313.1
 NC_044130.1	Modiolus nipponicus mitochondrion, complete genome	510	510	93%	3e-140	81.28%	NC_044130.1
 GQ480316.1	Modiolus comptus isolate MoC-7 voucher LSGB41210-7 cytochrome c oxidase subunit I (COI) gene, partial cds; mitochondrial	508	508	91%	1e-139	81.51%	GQ480316.1
 GQ480314.1	Modiolus comptus isolate MoC-4 voucher LSGB41210-4 cytochrome c oxidase subunit I (COI) gene, partial cds; mitochondrial	508	508	91%	1e-139	81.51%	GQ480314.1
 GQ480315.1	Modiolus comptus isolate MoC-6 voucher LSGB41210-6 cytochrome c oxidase subunit I (COI) gene, partial cds; mitochondrial	503	503	91%	5e-138	81.34%	GQ480315.1
 KU597627.1	Bathymodiolus thermophilus isolate 1600R cytochrome oxidase subunit I (COI) gene, complete cds; mitochondrial	462	462	100%	8e-126	79.10%	KU597627.1
 AF456306.1	Bathymodiolus thermophilus haplotype Bt25 cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial gene for mitochondrial product	462	462	100%	8e-126	79.10%	AF456306.1
 AF456305.1	Bathymodiolus thermophilus haplotype Bt24 cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial gene for mitochondrial product	462	462	100%	8e-126	79.10%	AF456305.1
 AF456304.1	Bathymodiolus thermophilus haplotype Bt23 cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial gene for mitochondrial product	462	462	100%	8e-126	79.10%	AF456304.1
 AF456299.1	Bathymodiolus thermophilus haplotype Bt18 cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial gene for mitochondrial product	462	462	100%	8e-126	79.10%	AF456299.1
 NC_039552.1	Bathymodiolus securiformis mitochondrion, complete genome	460	460	100%	3e-125	79.10%	NC_039552.1
 KU597626.1	Bathymodiolus thermophilus isolate 1600T cytochrome oxidase subunit I (COI) gene, complete cds; mitochondrial	457	457	100%	4e-124	78.96%	KU597626.1
 KC429094.1	Modiolus rumphii voucher BivAToL-90 cytochrome c oxidase subunit I (COI) gene, partial cds; mitochondrial	457	457	96%	4e-124	79.26%	KC429094.1
 AF456303.1	Bathymodiolus thermophilus haplotype Bt22 cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial gene for mitochondrial product	457	457	100%	4e-124	78.96%	AF456303.1
 AF456302.1	Bathymodiolus thermophilus haplotype Bt21 cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial gene for mitochondrial product	457	457	100%	4e-124	78.96%	AF456302.1
 AF456301.1	Bathymodiolus thermophilus haplotype Bt20 cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial gene for mitochondrial product	457	457	100%	4e-124	78.99%	AF456301.1
 AF456300.1	Bathymodiolus thermophilus haplotype Bt19 cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial gene for mitochondrial product	457	457	100%	4e-124	78.96%	AF456300.1
 AF456298.1	Bathymodiolus thermophilus haplotype Bt17 cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial gene for mitochondrial product	457	457	100%	4e-124	78.96%	AF456298.1
 AF456308.1	Bathymodiolus thermophilus haplotype Bt27 cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial gene for mitochondrial product	451	451	100%	2e-122	78.81%	AF456308.1
 AF456307.1	Bathymodiolus thermophilus haplotype Bt26 cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial gene for mitochondrial product	451	451	100%	2e-122	78.81%	AF456307.1
 AP014562.1	Bathymodiolus septemdierum mitochondrial DNA, complete sequence	446	446	98%	8e-121	78.78%	AP014562.1
 AF456292.1	Bathymodiolus thermophilus haplotype Bt11 cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial gene for mitochondrial product	440	440	100%	4e-119	78.51%	AF456292.1
 AY608439.2	Bathymodiolus tangaroa isolate CapeT cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial	436	436	92%	5e-118	79.48%	AY608439.2
 JN978517.1	Bathymodiolus thermophilus isolate A2224_32 cytochrome c oxidase subunit I (COI) gene, partial cds; mitochondrial	435	435	85%	2e-117	80.31%	JN978517.1
 JN978501.1	Bathymodiolus thermophilus isolate A2223_40 cytochrome c oxidase subunit I (COI) gene, partial cds; mitochondrial	435	435	85%	2e-117	80.31%	JN978501.1
 JN978452.1	Bathymodiolus thermophilus isolate A2229_26 cytochrome c oxidase subunit I (COI) gene, partial cds; mitochondrial	435	435	85%	2e-117	80.31%	JN978452.1
 AF456318.1	Bathymodiolus sp. RCV-2003 haplotype Bt37 cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial gene for mitochondrial product	429	429	100%	8e-116	78.24%	AF456318.1
 AB539004.1	Gigantidas crypta mitochondrial COI gene for cytochrome c oxidase subunit I, partial cds	427	427	92%	3e-115	79.12%	AB539004.1