FastQCFastQC Report
Пт 2 мар 2018
chr16.1.fastq

Summary

[OK]Basic Statistics

MeasureValue
Filenamechr16.1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9286
Sequences flagged as poor quality0
Sequence length30-51
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCGATGCTAGAAGAAAAATGGCACATAACAGAGATCCAGATACAAATGAA620.6676717639457247No Hit
CCCAGCACCATTAGGAAGTTAAAATCGGTCAGTTTCATCCGGTCTCTGTTG590.6353650656902864No Hit
GTCCGATTCTTTCAGCTGAAATCTAAATGTCTCATTCCACTCAGGGTTGAG550.5922894680163687No Hit
GTCGTCTTTTCTTCCGGGACCTTGGTTCCCTGACTGATCTTGGCCCTCTCA490.5276760715054921No Hit
GGCTGGAGTACGTGTGGATCTTAAACTTGTGTTTGCTGCGGGGGTCATCGG470.5061382726685333No Hit
GGGCGATGTAGTCTGGAGTGCCACAGAATGTCTTGGTTGTCACCCCATCCC460.49536937325005387No Hit
GTCAGTTTCATCCGGTCTCTGTTGCCATTGTTGTCAAATTTGGAGACAGTG390.4199870773206978No Hit
CTTCTGTTTGCTCTCACTTTTGGGATCGGGAATCAGTTTCAGTTTTACGTA390.4199870773206978No Hit
GTCCAAGTTCATGATGAAGAGTTTATCAGTGGGGGTCAGTTCCACAGGCTG360.38768037906525954No Hit
GTCGTCATTGTGGTTAATAACATTTGAACACATATTTTAAAGCATGTGTAA330.35537368080982124No Hit
GTCTTCTGTTTGCTCTCACTTTTGGGATCGGGAATCAGTTTCAGTTTTACG310.33383588197286235No Hit
GTCTTTTCTTCCGGGACCTTGGTTCCCTGACTGATCTTGGCCCTCTCAAAT310.33383588197286235No Hit
CCGGAAGTGGAAGAGTACCGCTAACATCCAATTATCCACAGATTGGATGGT310.33383588197286235No Hit
GCCCTCTCAAATTTCTGCCGCAGTTCTTCATTGGCCTCACTTTCTTCTGGT300.32306698255438293No Hit
CCCGGAAGTGGAAGAGTACCGCTAACATCCAATTATCCACAGATTGGATGG290.3122980831359035No Hit
GGCACATAACAGAGATCCAGATACAAATGAACATTTCCACAAACATCTTGC270.2907602842989446No Hit
CACATAACAGAGATCCAGATACAAATGAACATTTCCACAAACATCTTGCAA250.2692224854619858No Hit
GCCCGGAAGTGGAAGAGTACCGCTAACATCCAATTATCCACAGATTGGATG250.2692224854619858No Hit
GGATGAGGGTGAGCAAAGACATAAAGTATCAGAAACTACAACACTGAGGTA230.24768468662502693No Hit
GTCGGGAGGTGTTAGGACTGGTGGATGGCGGGTGAAAAATCGGTCGAAGTT220.23691578720654746No Hit
CCGATTCTTTCAGCTGAAATCTAAATGTCTCATTCCACTCAGGGTTGAGGG210.22614688778806805No Hit
CCGCTAACATCCAATTATCCACAGATTGGATGGTTGGGGGTGAATATGGCA210.22614688778806805No Hit
CGCTAACATCCAATTATCCACAGATTGGATGGTTGGGGGTGAATATGGCAG200.21537798836958863No Hit
CGGGTTTTAAAAATTCAGAGTTAACAAAGGAAAATCCTTCGAATTCTGATT200.21537798836958863No Hit
CTCAAATTTCTGCCGCAGTTCTTCATTGGCCTCACTTTCTTCTGGTGGCAC200.21537798836958863No Hit
CCCGTTTGTTGTGCTGGTGATGGCTAATGCTTCAGATAACCACATGGTCCA200.21537798836958863No Hit
CTCAGAATCGAGCATCACGTTGTCAAGTTTTAGGTCACGGTAAATGATGCC200.21537798836958863No Hit
GTCACATTTCATCCCCTGGTGGATGAGTCCATACAGCAGTGACCCACAGTG200.21537798836958863No Hit
CTATAATTGGATAATGCGCTTATTCTAAACTAAACATTTTCAAATGTAGAA190.20460908895110919No Hit
CCGGTCTCTGTTGCCATTGTTGTCAAATTTGGAGACAGTGTTGGTCGTCTT190.20460908895110919No Hit
GCCCTCTCAAATTTCTGCCGCAGTTCTTCATTGGCCTCACTTCCTTCTGGT190.20460908895110919No Hit
CTCCAAGAGACAATAGTTCACAGTAACTGCAAAGCTTACTCACAATTTTTA190.20460908895110919No Hit
GGCTCCTTGAACCGGCCGACTTGCTGGATGTGATACATGAGGTCGCCCCCA190.20460908895110919No Hit
GCATATATTAATTCAGTTTAATCATATCAATTCTTAAACAAAAAACTTCCT180.19384018953262977No Hit
GGTGAATATGGCAGTGCAGAAAAAGAGGGAAAGAAAGCAGGCATTTTCTCT180.19384018953262977No Hit
CGGAGATCTACACATCTACTTAGCTCTTGACTTCGGGTTTTAAAAATTCAG180.19384018953262977No Hit
GGGTGAGCAAAGACATAAAGTATCAGAAACTACAACACTGAGGTAGCACCC180.19384018953262977No Hit
CTGCTGGTCAAATCCCAATCCCAAATCTCTACTGACAGTCTTCTGTCTTTG170.18307129011415035No Hit
GCCCTTTTCAAGTAGTTTGGGGATGAGGGTGAGCAAAGACATAAAGTATCA170.18307129011415035No Hit
CTCTATAATTGGATAATGCGCTTATTCTAAACTAAACATTTTCAAATGTAG170.18307129011415035No Hit
CTCGGGGGCGATGTAGTCTGGAGTGCCACAGAATGTCTTGGTTGTCACCCC170.18307129011415035No Hit
CTGATGACTTCCTGGTCGGGAGGTGTTAGGACTGGTGGATGGCGGGTGAAA170.18307129011415035No Hit
CAGCAAATTCATTTTGGTCCAAGTTCATGATGAAGAGTTTATCAGTGGGGG160.1723023906956709No Hit
CTTTGATATCACGTTCGCCTTCAGGTCCACAACCCAGACGTTTGCCTGGGT160.1723023906956709No Hit
GGCCCTCTCAAATTTCTGCCGCAGTTCTTCATTGGCCTCACTTTCTTCTGG160.1723023906956709No Hit
CTTTTCTTCCGGGACCTTGGTTCCCTGACTGATCTTGGCCCTCTCAAATTT160.1723023906956709No Hit
CCTGTCGATGTGGGCCTGGATGTAGATGCGGCCGCGGCGCTCCGTGTGGTC160.1723023906956709No Hit
GGGGTGAATATGGCAGTGCAGAAAAAGAGGGAAAGAAAGCAGGCATTTTCT160.1723023906956709No Hit
CTTGGGGATAGAAATGTGGTGGAAATTTTCTAAGAAAAGAAGTAAGTCATT160.1723023906956709No Hit
CTCTTTGATATCACGTTCGCCTTCAGGTCCACAACCCAGACGTTTGCCTGG160.1723023906956709No Hit
CTCCGCAGTTAGTTCCTTTCTCCTGAGTTCCCTCCTCAGTTCCCACTTTGT150.16153349127719147No Hit
GTTCAAGTTTCTCCCAATCAATATACCGGAAAAATGCATGCTCTTTGATAT150.16153349127719147No Hit
GTCCTCATCTGCTTCTTCACTAGTGTATTTCCAGTGCTAAGAATAGTGCCT150.16153349127719147No Hit
CCAGCACCATTAGGAAGTTAAAATCGGTCAGTTTCATCCGGTCTCTGTTGC150.16153349127719147No Hit
GTTGTTTCAGAGAGTGGTGCCAAATGCCCTTTTCAAGTAGTTTGGGGATGA150.16153349127719147No Hit
GGGGTCAGTTCCACAGGCTGTCTGGTGAACTCTTTGTCGAAGTTGGAGGTG140.15076459185871205No Hit
CCTGTATGAACTGAACTGTGTTAGGGCCCCTAAAGGTCTGAGAACTCCAGG140.15076459185871205No Hit
CGATGCTAGAAGAAAAATGGCACATAACAGAGATCCAGATACAAATGAACA140.15076459185871205No Hit
CCGAGCCAGAAACTTTACTCTGAGGCAAAACAATGGAATTGATTCCCATTG140.15076459185871205No Hit
GCACATAACAGAGATCCAGATACAAATGAACATTTCCACAAACATCTTGCA140.15076459185871205No Hit
GTCAGTTCCACAGGCTGTCTGGTGAACTCTTTGTCGAAGTTGGAGGTGTCT140.15076459185871205No Hit
TGATGACTTCCTGGTCGGGAGGTGTTAGGACTGGTGGATGGCGGGTGAAAA140.15076459185871205No Hit
CCTGGATGTAGATGCGGCCGCGGCGCTCCGTGTGGTCCGTGCCACACAGGC130.1399956924402326No Hit
CAGCACCATTAGGAAGTTAAAATCGGTCAGTTTCATCCGGTCTCTGTTGCC130.1399956924402326No Hit
GGCAGTGCAGAAAAAGAGGGAAAGAAAGCAGGCATTTTCTCTCCCCATTGG130.1399956924402326No Hit
GCTGGAGTACGTGTGGATCTTAAACTTGTGTTTGCTGCGGGGGTCATCGGA130.1399956924402326No Hit
CTTTGATAATGTGTTAATTATGCAGCTGCATTTTCCATAGGCCATCTGCAT120.1292267930217532No Hit
GTGCCAAATGCCCTTTTCAAGTAGTTTGGGGATGAGGGTGAGCAAAGACAT120.1292267930217532No Hit
GCTAGAAGAAAAATGGCACATAACAGAGATCCAGATACAAATGAACATTTC120.1292267930217532No Hit
CTCTTGACTTCGGGTTTTAAAAATTCAGAGTTAACAAAGGAAAATCCTTCG120.1292267930217532No Hit
ATCCGGTCTCTGTTGCCATTGTTGTCAAATTTGGAGACAGTGTTGGTCGTC120.1292267930217532No Hit
GGGGCGATGTAGTCTGGAGTGCCACAGAATGTCTTGGTTGTCACCCCATCC120.1292267930217532No Hit
GTGAATATGGCAGTGCAGAAAAAGAGGGAAAGAAAGCAGGCATTTTCTCTC120.1292267930217532No Hit
GTCGAAGTTTTCAGCATTTCGCCCACAAGCTTTTGGCTTATAAGGGGGCTG110.11845789360327373No Hit
ACATAACAGAGATCCAGATACAAATGAACATTTCCACAAACATCTTGCAAA110.11845789360327373No Hit
GCTCCTTGAACCGGCCGACTTGCTGGATGTGATACATGAGGTCGCCCCCAT110.11845789360327373No Hit
GATGAGGGTGAGCAAAGACATAAAGTATCAGAAACTACAACACTGAGGTAG110.11845789360327373No Hit
GTGAGCAAAGACATAAAGTATCAGAAACTACAACACTGAGGTAGCACCCAA110.11845789360327373No Hit
CCCAAAGCAAATAAAGTTTGAAATGTAATGTAAAACCAGGGCCCTTTGGGG110.11845789360327373No Hit
CGTCATTGTGGTTAATAACATTTGAACACATATTTTAAAGCATGTGTAACA110.11845789360327373No Hit
CTGTCGATGTGGGCCTGGATGTAGATGCGGCCGCGGCGCTCCGTGTGGTCC110.11845789360327373No Hit
GTTCCATGATGGATTGGAAGAGTTCATCTTCATCCTCCCCTTCAAAGGGTG110.11845789360327373No Hit
ATAACAGAGATCCAGATACAAATGAACATTTCCACAAACATCTTGCAAAAC110.11845789360327373No Hit
CCGGGCTGCAGCCAAAGTTGCCTCAGATTATAAAGGCCAGGGGGTCGGTAA110.11845789360327373No Hit
TCTCGATGCTAGAAGAAAAATGGCACATAACAGAGATCCAGATACAAATGA110.11845789360327373No Hit
GGGAGGTGTTAGGACTGGTGGATGGCGGGTGAAAAATCGGTCGAAGTTTTC110.11845789360327373No Hit
ATGAGGGTGAGCAAAGACATAAAGTATCAGAAACTACAACACTGAGGTAGC110.11845789360327373No Hit
CCCCAAAGCAAATAAAGTTTGAAATGTAATGTAAAACCAGGGCCCTTTGGG110.11845789360327373No Hit
CGGAAGTGGAAGAGTACCGCTAACATCCAATTATCCACAGATTGGATGGTT110.11845789360327373No Hit
CCGGAAGTGGAAGAGTACCGCTAACATCCAATTATCCACAGATTGGATGG110.11845789360327373No Hit
CTGGAAGTTTGGAAAATTGTACCTCTATAATTGGATAATGCGCTTATTCTA110.11845789360327373No Hit
GTGGGAGTGAGGTGGGCACACTGAACTCAGGAGCACACGTGGGTATGTGTG100.10768899418479431No Hit
GTTCTTTTCAAGGTCTGGTGCCTCCAGAACAGGTGAAATAGAGGGATTCCT100.10768899418479431No Hit
GTGGTTAATAACATTTGAATACATATTTTAAAGCATGTGTAACAATGTGAG100.10768899418479431No Hit
CTCCAGAACAGGTGAAATAGAGGGATTCCTCTTAGGCAAAGCAACCATACA100.10768899418479431No Hit
CTTGGACATAGACTTGGGATAGGCTACGTTGTGTTCCATGATGGATTGGAA100.10768899418479431No Hit
CTCCCCTGGTCTCATCAACCCTATTTCGCTTTCCCTGCCTGTGGGCCTCTT100.10768899418479431No Hit
GTCACCTTTTTTTTTCTTTTTTTTTCTTTTTTTTGCATTTGAACAACAACA100.10768899418479431No Hit
CTCCACGTCATCATCTTGGATCACAACGTCCTTCTTCAGGATCTTCACAGC100.10768899418479431No Hit
GTCGTCATTGTGGTTAATAACATTTGAATACATATTTTAAAGCATGTGTAA100.10768899418479431No Hit
CCCTTTTCAAGTAGTTTGGGGATGAGGGTGAGCAAAGACATAAAGTATCAG100.10768899418479431No Hit
CTCATCTGCTTCTTCACTAGTGTATTTCCAGTGCTAAGAATAGTGCCTGGC100.10768899418479431No Hit
GTTGGCTTGGGGATAGAAATGTGGTGGAAATTTTCTAAGAAAAGAAGTAAG100.10768899418479431No Hit
GCATGCTCTTTGATATCACGTTCGCCTTCAGGTCCACAACCCAGACGTTTG100.10768899418479431No Hit
GCAGTGCAGAAAAAGAGGGAAAGAAAGCAGGCATTTTCTCTCCCCATTGGG100.10768899418479431No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.2)