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Header |
Program |
needle |
Rundate |
Sat Apr 28 2007 11:20:39
|
Align
format |
srspair |
Report file |
temp_job1.needlep
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Results |
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#=======================================
#
# Aligned_sequences: 2
# 1: FUMC_ECOLI
# 2: FUMH_HUMAN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 333
# Identity: 201/333 (60.4%)
# Similarity: 254/333 (76.3%)
# Gaps: 3/333 ( 0.9%)
# Score: 1018.5
#
#
#=======================================
FUMC_ECOLI 1 GAIDVPADKLWGAQTQRSLEHFRIS--TEKMPTSLIHALALTKRAAAKVN 48
|.:.||.||.:||||.||..:|:|. ||:|||.:|.|..:.|||||:||
FUMH_HUMAN 1 GELKVPNDKYYGAQTVRSTMNFKIGGVTERMPTPVIKAFGILKRAAAEVN 50
FUMC_ECOLI 49 EDLGLLSEEKASAIRQAADEVLAGQHDDEFPLAIWQTGSGTQSNMNMNEV 98
:|.| |..:.|:||.:|||||..|:.:|.|||.:||||||||:|||:|||
FUMH_HUMAN 51 QDYG-LDPKIANAIMKAADEVAEGKLNDHFPLVVWQTGSGTQTNMNVNEV 99
FUMC_ECOLI 99 LANRASELLGGVRGMERKVHPNDDVNKSQSSNDVFPTAMHVAALLALRKQ 148
::|||.|:|||..|.:..|||||.|||||||||.||||||:||.:.:.:.
FUMH_HUMAN 100 ISNRAIEMLGGELGSKIPVHPNDHVNKSQSSNDTFPTAMHIAAAIEVHEV 149
FUMC_ECOLI 149 LIPQLKTLTQTLNEKSRAFADIVKIGRTHLQDATPLTLGQEISGWVAMLE 198
|:|.|:.|...|:.||:.||.|:||||||.|||.|||||||.||:|..::
FUMH_HUMAN 150 LLPGLQKLHDALDAKSKEFAQIIKIGRTHTQDAVPLTLGQEFSGYVQQVK 199
FUMC_ECOLI 199 HNLKHIEYSLPHVAELALGGTAVGTGLNTHPEYARRVADELAVITCAPFV 248
:.:..|:.::|.:.|||.|||||||||||...:|.:||.::|.:|..|||
FUMH_HUMAN 200 YAMTRIKAAMPRIYELAAGGTAVGTGLNTRIGFAEKVAAKVAALTGLPFV 249
FUMC_ECOLI 249 TAPNKFEALATCDALVQAHGALKGLAASLMKIANDVRWLASGPRCGIGEI 298
||||||||||..||||:..||:...|.||||||||:|:|.||||.|:||:
FUMH_HUMAN 250 TAPNKFEALAAHDALVELSGAMNTTACSLMKIANDIRFLGSGPRSGLGEL 299
FUMC_ECOLI 299 SIPENEPGSSIMPGKVNPTQCEALTMLCCQVMG 331
.:|||||||||||||||||||||:||:..||||
FUMH_HUMAN 300 ILPENEPGSSIMPGKVNPTQCEAMTMVAAQVMG 332
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Additional
Information |
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