######################################## # Program: needle # Rundate: Wed Sep 13 2006 19:09:48 # Align_format: srspair # Report_file: idhc_ecoli_needle ######################################## #======================================= # # Aligned_sequences: 2 # 1: IDH_ECOLI # 2: IDHC_HUMAN # Matrix: EBLOSUM62 # Gap_penalty: 10.0 # Extend_penalty: 0.0 # # Length: 561 # Identity: 83/561 (14.8%) # Similarity: 126/561 (22.5%) # Gaps: 344/561 (61.3%) # Score: 191.0 # # #======================================= IDH_ECOLI 1 ----------------------IIPYIEGD----GIGVDVTPAMLKVVDA 24 |.||:|.| .:|::...| IDHC_HUMAN 1 SVVEMQGDEMTRIIWELIKEKLIFPYVELDLHSYDLGIENRDA------- 43 IDH_ECOLI 25 AVEKAYKGERKISWMEIYTGEKSTQVYGQDVWLPAETLDLIREYRVAIKG 74 |.::.|: :..:.|:::.|.:|. IDHC_HUMAN 44 ------------------TNDQVTK----------DAAEAIKKHNVGVKC 65 IDH_ECOLI 75 PLTTP------------------------VGGGIRSLNVALRQELDLYIC 100 ...|| :|| IDHC_HUMAN 66 ATITPDEKRVEEFKLKQMWKSPNGTIRNILGG------------------ 97 IDH_ECOLI 101 LRPVRYYQGTPSPVKHPELTDMVIFRE-----NSEDIYAGIEWKADSADA 145 .:||| |...:.:| | IDHC_HUMAN 98 ----------------------TVFREAIICKNIPRLVSG--W------- 116 IDH_ECOLI 146 EKVIKFLREEMGVKKIRFPEHC-------------GIGIKPCSEEGTKRL 182 ||.|....|. |.| IDHC_HUMAN 117 ------------VKPIIIGRHAYGDQYRATDFVVPGPG------------ 142 IDH_ECOLI 183 VRAAIEYAIANDRDSVT-LVH----------------------------- 202 :..|.|..::....|| ||| IDHC_HUMAN 143 -KVEITYTPSDGTQKVTYLVHNFEEGGGVAMGMYNQDKSIEDFAHSSFQM 191 IDH_ECOLI 203 ------------KGNIMKFTEGAFKD-------------------WGYQL 221 |..|:|..:|.||| | IDHC_HUMAN 192 ALSKGWPLYLSTKNTILKKYDGRFKDIFQEIYDKQYKSQFEAQKIW---- 237 IDH_ECOLI 222 AREEFGGELIDGGPWLKVKNPNTGKEIVIKDVIADA------FLQQILLR 265 :...||| |::|.| | IDHC_HUMAN 238 ----YEHRLID-------------------DMVAQAMKSEGGF------- 257 IDH_ECOLI 266 PAEYDVIACMNLNGDYISDALAAQVGGIG------IAPGANIGDECALFE 309 :.||.|.:||..||::|...|.:| :.|.....:. | IDHC_HUMAN 258 -----IWACKNYDGDVQSDSVAQGYGSLGMMTSVLVCPDGKTVEA----E 298 IDH_ECOLI 310 ATHGTAPKY-----AGQD-KVNPGSIILSAEMMLRHMGWTEAADLIVKGM 353 |.|||..:: .||: ..||.:.|.: || :|: IDHC_HUMAN 299 AAHGTVTRHYRMYQKGQETSTNPIASIFA---------WT-------RGL 332 IDH_ECOLI 354 E-----------------------GAINAKTVTYDFERLMDG------AK 374 . ..|.|..:|.|....:.| :. IDHC_HUMAN 333 AHRAKLDNNKELAFFANALEEVSIETIEAGFMTKDLAACIKGLPNVQRSD 382 IDH_ECOLI 375 LLKCSEFGDAI 385 .|...||.|.: IDHC_HUMAN 383 YLNTFEFMDKL 393 #--------------------------------------- #---------------------------------------