Version: EMBOSS:6.4.0.0

   Standard (Mandatory) qualifiers:
  [-sequence]          seqall     (Gapped) sequence(s) filename and optional
                                  format, or reference (input USA)

   Additional (Optional) qualifiers:
   -outfile            outfile    [stdout] If you enter the name of a file
                                  here then this program will write the
                                  sequence details into that file.
   -html               boolean    [N] Format output as an HTML table

   Advanced (Unprompted) qualifiers:
   -[no]columns        boolean    [Y] Set this option on (Y) to print the
                                  sequence information into neat, aligned
                                  columns in the output file. Alternatively,
                                  leave it unset (N), in which case the
                                  information records will be delimited by a
                                  character, which you may specify by using
                                  the -delimiter option. In other words, if
                                  -columns is set on, the -delimiter option is
                                  overriden.
   -delimiter          string     [|] This string, which is usually a single
                                  character only, is used to delimit
                                  individual records in the text output file.
                                  It could be a space character, a tab
                                  character, a pipe character or any other
                                  character or string. (Any string)
   -only               boolean    [N] This is a way of shortening the command
                                  line if you only want a few things to be
                                  displayed. Instead of specifying:
                                  '-nohead -noname -noacc -notype -nopgc
                                  -nodesc'
                                  to get only the length output, you can
                                  specify
                                  '-only -length'
   -[no]heading        boolean    [Y] Display column headings
   -usa                boolean    [@(!$(only))] Display the USA of the
                                  sequence
   -database           boolean    [@(!$(only))] Display 'database' column
   -name               boolean    [@(!$(only))] Display 'name' column
   -accession          boolean    [@(!$(only))] Display 'accession' column
   -gi                 boolean    [N] Display 'GI' column
   -seqversion         boolean    [N] Display 'version' column
   -type               boolean    [@(!$(only))] Display 'type' column
   -length             boolean    [@(!$(only))] Display 'length' column
   -pgc                boolean    [@(!$(only))] Display 'percent GC content'
                                  column
   -organism           boolean    [@(!$(only))] Display 'organism' column
   -description        boolean    [@(!$(only))] Display 'description' column

   General qualifiers:
   -help               boolean    Report command line options and exit. More
                                  information on associated and general
                                  qualifiers can be found with -help -verbose