######################################## # Program: needle # Rundate: Mon Mar 13 2006 20:17:13 # Align_format: srspair # Report_file: ecoli_human.needle ######################################## #======================================= # # Aligned_sequences: 2 # 1: KITH_ECOLI # 2: KITH_HUMAN # Matrix: EBLOSUM62 # Gap_penalty: 10.0 # Extend_penalty: 0.5 # # Length: 188 # Identity: 47/188 (25.0%) # Similarity: 77/188 (41.0%) # Gaps: 20/188 (10.6%) # Score: 112.0 # # #======================================= KITH_ECOLI 1 AQLYFYYSAMNAGKSTALLQSSYNYQERGMRTVVYTAEIDDRFGAGKVS- 49 .|:......|.:||||.|::....:|....:.:|.....|.|:.:...: KITH_HUMAN 1 GQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYSSSFCTH 50 KITH_ECOLI 50 SRIGLSS-PAKLFNQNSSLFDEIRAEHEQQAIHCVLVDECQFLTRQQVYE 98 .|..:.: ||.|... ...|...:..:.:||.||. ..:.| KITH_HUMAN 51 DRNTMEALPACLLRD---------VAQEALGVAVIGIDEGQFF--PDIVE 89 KITH_ECOLI 99 LSEVVDQLDIPVLCYGLRTDFRGELFIGSQYLLAWSDKLVELKTICF-CG 147 ..|.:......|:...|...|:.:.|.....|:..::.:|:|..:|. |. KITH_HUMAN 90 FCEAMANAGKTVIVAALDGTFQRKPFGAILNLVPLAESVVKLTAVCMECF 139 KITH_ECOLI 148 RKASMVLRLDQAGRPYNEGEQVVIGGNERYVSVCRKHY 185 |:|:...||. .|.|..||||.::|.||||..| KITH_HUMAN 140 REAAYTKRLG------TEKEVEVIGGADKYHSVCRLCY 171 #--------------------------------------- #---------------------------------------