>Feature gb|CP002657.1| 104 1525 gene locus_tag Alide2_0001 104 1525 CDS product Chromosomal replication initiator protein dnaA transl_table 11 protein_id gb|AEB82441.1||gnl|jgi|Alide2_0001 note SMART: Chromosomal replication initiator, DnaA C-terminal; ATPase, AAA+ type, core~TIGRFAM: Chromosomal replication control, initiator DnaA~KEGG: dia:Dtpsy_0001 chromosomal replication initiation protein~HAMAP: Chromosomal replication control, initiator DnaA~PFAM: Chromosomal replication control, initiator (DnaA)/regulator (Hda); Chromosomal replication initiator, DnaA C-terminal inference protein motif:HAMAP:MF_00377 db_xref InterPro:IPR001957 db_xref InterPro:IPR003593 db_xref InterPro:IPR013159 db_xref InterPro:IPR013317 1652 2758 gene locus_tag Alide2_0002 1652 2758 CDS product DNA polymerase III, beta subunit EC_number 2.7.7.7 transl_table 11 protein_id gb|AEB82442.1||gnl|jgi|Alide2_0002 note SMART: DNA polymerase III, beta chain~TIGRFAM: DNA polymerase III, beta chain~KEGG: dia:Dtpsy_0002 DNA polymerase III, beta subunit~PFAM: DNA polymerase III, beta chain, C-terminal; DNA polymerase III, beta chain, N-terminal; DNA polymerase III, beta chain, central inference protein motif:TFAM:TIGR00663 db_xref GO:0003677 db_xref GO:0003887 db_xref GO:0008408 db_xref InterPro:IPR001001 db_xref InterPro:IPR022634 db_xref InterPro:IPR022635 db_xref InterPro:IPR022637 2877 5459 gene locus_tag Alide2_0003 2877 5459 CDS product DNA gyrase, B subunit transl_table 11 protein_id gb|AEB82443.1||gnl|jgi|Alide2_0003 note TIGRFAM: DNA gyrase, subunit B~PFAM: DNA topoisomerase, type IIA, subunit B, domain 2; ATPase-like, ATP-binding domain; Toprim domain; DNA topoisomerase, type IIA, subunit B, C-terminal~KEGG: dia:Dtpsy_0003 DNA gyrase, B subunit~SMART: DNA topoisomerase, type IIA, subunit B/N-terminal; ATPase-like, ATP-binding domain inference protein motif:TFAM:TIGR01059 db_xref GO:0003677 db_xref GO:0003918 db_xref GO:0005524 db_xref InterPro:IPR001241 db_xref InterPro:IPR002288 db_xref InterPro:IPR003594 db_xref InterPro:IPR006171 db_xref InterPro:IPR011557 db_xref InterPro:IPR013506 5524 6156 gene locus_tag Alide2_0004 5524 6156 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82444.1||gnl|jgi|Alide2_0004 inference ab initio prediction:Prodigal:1.4 7277 6147 gene locus_tag Alide2_0005 7277 6147 CDS product helix-turn-helix domain protein transl_table 11 protein_id gb|AEB82445.1||gnl|jgi|Alide2_0005 note manually curated~PFAM: Helix-turn-helix type 3~KEGG: sbl:Sbal_4355 XRE family transcriptional regulator~SMART: Helix-turn-helix type 3 inference protein motif:PFAM:PF01381 db_xref GO:0043565 db_xref InterPro:IPR001387 8685 7771 gene locus_tag Alide2_0006 8685 7771 CDS product Integrase catalytic region transl_table 11 protein_id gb|AEB82446.1||gnl|jgi|Alide2_0006 note PFAM: Integrase, catalytic core~KEGG: rpf:Rpic12D_2820 integrase catalytic region inference protein motif:PFAM:PF00665 db_xref GO:0003677 db_xref InterPro:IPR001584 9005 8682 gene locus_tag Alide2_0007 9005 8682 CDS product transposase IS3/IS911 family protein transl_table 11 protein_id gb|AEB82447.1||gnl|jgi|Alide2_0007 note PFAM: Transposase IS3/IS911family~KEGG: ajs:Ajs_0906 transposase IS3/IS911 family protein inference protein motif:PFAM:PF01527 db_xref GO:0003677 db_xref GO:0004803 db_xref InterPro:IPR002514 9736 9272 gene locus_tag Alide2_0008 9736 9272 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82448.1||gnl|jgi|Alide2_0008 note KEGG: cyp:PCC8801_1290 hypothetical protein inference similar to AA sequence:KEGG:PCC8801_1290 10466 10879 gene locus_tag Alide2_0009 10466 10879 CDS product protein of unknown function UPF0153 transl_table 11 protein_id gb|AEB82449.1||gnl|jgi|Alide2_0009 note PFAM: Uncharacterised protein family UPF0153~KEGG: dia:Dtpsy_0006 protein of unknown function UPF0153 inference protein motif:PFAM:PF03692 db_xref InterPro:IPR005358 12097 10904 gene locus_tag Alide2_0010 12097 10904 CDS product Formyl-CoA transferase EC_number 2.8.3.16 transl_table 11 protein_id gb|AEB82450.1||gnl|jgi|Alide2_0010 note KEGG: reh:H16_A2137 acyl-CoA transferase/carnitine dehydratase~PFAM: CoA-transferase family III inference protein motif:PRIAM:2.8.3.16 db_xref InterPro:IPR003673 12964 12107 gene locus_tag Alide2_0011 12964 12107 CDS product Enoyl-CoA hydratase/isomerase transl_table 11 protein_id gb|AEB82451.1||gnl|jgi|Alide2_0011 note PFAM: Crotonase, core~KEGG: reh:H16_A2138 enoyl-CoA hydratase/carnithine racemase inference protein motif:PFAM:PF00378 db_xref GO:0003824 db_xref InterPro:IPR001753 13018 13860 gene locus_tag Alide2_0012 13018 13860 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB82452.1||gnl|jgi|Alide2_0012 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: reh:H16_A2139 LysR family transcriptional regulator inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 14879 13857 gene locus_tag Alide2_0013 14879 13857 CDS product extra-cytoplasmic solute receptor transl_table 11 protein_id gb|AEB82453.1||gnl|jgi|Alide2_0013 note KEGG: reh:H16_A2140 extra-cytoplasmic solute receptor inference similar to AA sequence:KEGG:H16_A2140 db_xref InterPro:IPR005064 db_xref InterPro:IPR006311 16686 14914 gene locus_tag Alide2_0014 16686 14914 CDS product protein of unknown function DUF1446 transl_table 11 protein_id gb|AEB82454.1||gnl|jgi|Alide2_0014 note PFAM: Protein of unknown function DUF1446~KEGG: reh:H16_A2141 hypothetical protein inference protein motif:PFAM:PF07287 db_xref InterPro:IPR010839 18701 16683 gene locus_tag Alide2_0015 18701 16683 CDS product Methylcrotonoyl-CoA carboxylase EC_number 6.4.1.4 transl_table 11 protein_id gb|AEB82455.1||gnl|jgi|Alide2_0015 note PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Carbamoyl-phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; Biotin/lipoyl attachment~KEGG: xtr:100489724 acetyl-/propionyl-coenzyme A carboxylase alpha chain-like~SMART: Biotin carboxylase, C-terminal inference protein motif:PRIAM:6.4.1.4 db_xref InterPro:IPR000089 db_xref InterPro:IPR005479 db_xref InterPro:IPR005481 db_xref InterPro:IPR005482 19881 18718 gene locus_tag Alide2_0016 19881 18718 CDS product Isovaleryl-CoA dehydrogenase EC_number 1.3.99.10 transl_table 11 protein_id gb|AEB82456.1||gnl|jgi|Alide2_0016 note KEGG: reh:H16_A2143 acyl-CoA dehydrogenase, long-chain specific~PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal inference protein motif:PRIAM:1.3.99.10 db_xref InterPro:IPR006090 db_xref InterPro:IPR006091 db_xref InterPro:IPR006092 21623 20013 gene locus_tag Alide2_0017 21623 20013 CDS product Methylcrotonoyl-CoA carboxylase EC_number 6.4.1.4 transl_table 11 protein_id gb|AEB82457.1||gnl|jgi|Alide2_0017 note KEGG: reh:H16_A2144 propionyl-CoA carboxylase beta chain~PFAM: Carboxyl transferase inference protein motif:PRIAM:6.4.1.4 db_xref InterPro:IPR000022 22040 21735 gene locus_tag Alide2_0018 22040 21735 CDS product acylphosphatase transl_table 11 protein_id gb|AEB82458.1||gnl|jgi|Alide2_0018 note PFAM: Acylphosphatase-like~KEGG: ajs:Ajs_4152 acylphosphatase inference protein motif:PFAM:PF00708 db_xref InterPro:IPR001792 22068 22352 gene locus_tag Alide2_0019 22068 22352 CDS product 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein transl_table 11 protein_id gb|AEB82459.1||gnl|jgi|Alide2_0019 note PFAM: 4Fe-4S binding domain~KEGG: ajs:Ajs_4153 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein inference protein motif:PFAM:PF00037 db_xref GO:0009055 db_xref GO:0051536 db_xref InterPro:IPR001450 22670 24055 gene locus_tag Alide2_0020 22670 24055 CDS product homoserine dehydrogenase transl_table 11 protein_id gb|AEB82460.1||gnl|jgi|Alide2_0020 note PFAM: Homoserine dehydrogenase, catalytic; Aspartate/homoserine dehydrogenase, NAD-binding~KEGG: ajs:Ajs_4155 homoserine dehydrogenase inference protein motif:PFAM:PF00742 db_xref GO:0016491 db_xref GO:0050661 db_xref InterPro:IPR001342 db_xref InterPro:IPR005106 24215 26389 gene locus_tag Alide2_0021 24215 26389 CDS product DEAD_2 domain protein transl_table 11 protein_id gb|AEB82461.1||gnl|jgi|Alide2_0021 note KEGG: ajs:Ajs_4158 ATP-dependent DNA helicase DinG~PFAM: DEAD2; DNA/RNA helicase, DEAD/DEAH box type, N-terminal~SMART: Helicase, ATP-dependent, c2 type; DEAD-like helicase, N-terminal inference protein motif:PFAM:PF06733 db_xref GO:0003676 db_xref GO:0003677 db_xref GO:0004003 db_xref GO:0005524 db_xref GO:0008026 db_xref InterPro:IPR006555 db_xref InterPro:IPR010614 db_xref InterPro:IPR011545 db_xref InterPro:IPR014001 26402 27031 gene locus_tag Alide2_0022 26402 27031 CDS product DNA-directed DNA polymerase EC_number 2.7.7.7 transl_table 11 protein_id gb|AEB82462.1||gnl|jgi|Alide2_0022 note PFAM: Exonuclease, RNase T/DNA polymerase III~KEGG: ajs:Ajs_4160 DNA polymerase III, epsilon subunit~SMART: Exonuclease inference protein motif:PRIAM:2.7.7.7 db_xref InterPro:IPR006055 db_xref InterPro:IPR013520 27098 27577 gene locus_tag Alide2_0023 27098 27577 CDS product NLP/P60 protein transl_table 11 protein_id gb|AEB82463.1||gnl|jgi|Alide2_0023 note PFAM: NLP/P60~KEGG: ajs:Ajs_0001 NLP/P60 protein inference protein motif:PFAM:PF00877 db_xref InterPro:IPR000064 27616 28719 gene locus_tag Alide2_0024 27616 28719 CDS product phospho-2-dehydro-3-deoxyheptonate aldolase EC_number 2.5.1.54 transl_table 11 protein_id gb|AEB82464.1||gnl|jgi|Alide2_0024 note TIGRFAM: DHAP synthase, class 1~KEGG: ajs:Ajs_0002 phospho-2-dehydro-3-deoxyheptonate aldolase~PFAM: DAHP synthetase I/KDSA inference protein motif:TFAM:TIGR00034 db_xref GO:0003849 db_xref InterPro:IPR006218 db_xref InterPro:IPR006219 29312 32932 gene locus_tag Alide2_0025 29312 32932 CDS product diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) transl_table 11 protein_id gb|AEB82465.1||gnl|jgi|Alide2_0025 note TIGRFAM: Diguanylate cyclase, predicted; PAS~PFAM: Diguanylate phosphodiesterase, EAL domain; PAS fold; Diguanylate cyclase, predicted; GAF~KEGG: dia:Dtpsy_0021 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)~SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS; PAC motif; GAF inference protein motif:TFAM:TIGR00254 db_xref GO:0004871 db_xref InterPro:IPR000014 db_xref InterPro:IPR000160 db_xref InterPro:IPR001610 db_xref InterPro:IPR001633 db_xref InterPro:IPR003018 db_xref InterPro:IPR013767 33802 32999 gene locus_tag Alide2_0026 33802 32999 CDS product transcriptional regulator, IclR family transl_table 11 protein_id gb|AEB82466.1||gnl|jgi|Alide2_0026 note KEGG: dia:Dtpsy_0022 transcriptional regulator, IclR family~PFAM: Transcription regulator IclR, N-terminal; Transcription regulator IclR, C-terminal~SMART: Transcription regulator IclR, N-terminal inference protein motif:PFAM:PF09339 db_xref GO:0003677 db_xref InterPro:IPR005471 db_xref InterPro:IPR014757 33989 34960 gene locus_tag Alide2_0027 33989 34960 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82467.1||gnl|jgi|Alide2_0027 note KEGG: ajs:Ajs_0005 hypothetical protein inference similar to AA sequence:KEGG:Ajs_0005 db_xref InterPro:IPR005064 35999 34971 gene locus_tag Alide2_0028 35999 34971 CDS product acyl-CoA dehydrogenase domain-containing protein transl_table 11 protein_id gb|AEB82468.1||gnl|jgi|Alide2_0028 note PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal~KEGG: axy:AXYL_04409 acyl-CoA dehydrogenase, C-terminal domain-containing protein 1 inference protein motif:PFAM:PF00441 db_xref GO:0003995 db_xref InterPro:IPR006090 db_xref InterPro:IPR006092 37191 36004 gene locus_tag Alide2_0029 37191 36004 CDS product acyl-CoA dehydrogenase domain-containing protein transl_table 11 protein_id gb|AEB82469.1||gnl|jgi|Alide2_0029 note PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal~KEGG: axy:AXYL_04410 acyl-CoA dehydrogenase, middle domain-containing protein 12 inference protein motif:PFAM:PF00441 db_xref GO:0003995 db_xref InterPro:IPR006090 db_xref InterPro:IPR006091 db_xref InterPro:IPR006092 38203 37238 gene locus_tag Alide2_0030 38203 37238 CDS product extra-cytoplasmic solute receptor family protein 110 transl_table 11 protein_id gb|AEB82470.1||gnl|jgi|Alide2_0030 note KEGG: axy:AXYL_04411 extra-cytoplasmic solute receptor family protein 110 inference similar to AA sequence:KEGG:AXYL_04411 db_xref InterPro:IPR005064 40334 38241 gene locus_tag Alide2_0031 40334 38241 CDS product CoA-binding domain protein transl_table 11 protein_id gb|AEB82471.1||gnl|jgi|Alide2_0031 note KEGG: rme:Rmet_0842 CoA-binding~PFAM: CoA-binding; ATP-grasp fold, succinyl-CoA synthetase-type~SMART: CoA-binding inference protein motif:PFAM:PF02629 db_xref InterPro:IPR003781 db_xref InterPro:IPR013650 41149 40349 gene locus_tag Alide2_0032 41149 40349 CDS product Enoyl-CoA hydratase/isomerase transl_table 11 protein_id gb|AEB82472.1||gnl|jgi|Alide2_0032 note PFAM: Crotonase, core~KEGG: rme:Rmet_0841 enoyl-CoA hydratase inference protein motif:PFAM:PF00378 db_xref GO:0003824 db_xref InterPro:IPR001753 41244 42008 gene locus_tag Alide2_0033 41244 42008 CDS product transcriptional regulator, IclR family transl_table 11 protein_id gb|AEB82473.1||gnl|jgi|Alide2_0033 note KEGG: bpt:Bpet3285 IclR family transcriptional regulator~PFAM: Transcription regulator IclR, N-terminal; Transcription regulator IclR, C-terminal~SMART: Transcription regulator IclR, N-terminal inference protein motif:PFAM:PF09339 db_xref GO:0003677 db_xref InterPro:IPR005471 db_xref InterPro:IPR014757 42873 42268 gene locus_tag Alide2_0034 42873 42268 CDS product Lipid A 3-O-deacylase-related protein transl_table 11 protein_id gb|AEB82474.1||gnl|jgi|Alide2_0034 note PFAM: Lipid A 3-O-deacylase-related~KEGG: dia:Dtpsy_0024 hypothetical protein inference protein motif:PFAM:PF09411 db_xref InterPro:IPR018550 43581 42988 gene locus_tag Alide2_0035 43581 42988 CDS product protein of unknown function DUF1520 transl_table 11 protein_id gb|AEB82475.1||gnl|jgi|Alide2_0035 note PFAM: Domain of unknown function DUF1520~KEGG: ajs:Ajs_0007 hypothetical protein inference protein motif:PFAM:PF07480 db_xref InterPro:IPR011085 43798 44739 gene locus_tag Alide2_0036 43798 44739 CDS product exonuclease RdgC transl_table 11 protein_id gb|AEB82476.1||gnl|jgi|Alide2_0036 note PFAM: Putative exonuclease, RdgC~KEGG: ajs:Ajs_0008 recombination associated protein inference protein motif:PFAM:PF04381 db_xref InterPro:IPR007476 44759 46012 gene locus_tag Alide2_0037 44759 46012 CDS product nucleoside recognition domain protein transl_table 11 protein_id gb|AEB82477.1||gnl|jgi|Alide2_0037 note PFAM: Nucleoside recognition~KEGG: ajs:Ajs_0012 nucleoside recognition domain-containing protein inference protein motif:PFAM:PF07670 db_xref GO:0001882 db_xref InterPro:IPR011642 46499 46750 gene locus_tag Alide2_0038 46499 46750 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82478.1||gnl|jgi|Alide2_0038 note KEGG: dia:Dtpsy_0031 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_0031 48596 46719 gene locus_tag Alide2_0039 48596 46719 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82479.1||gnl|jgi|Alide2_0039 note KEGG: blt:Balat_0053 beta-galactosidase I inference similar to AA sequence:KEGG:Balat_0053 49131 48694 gene locus_tag Alide2_0040 49131 48694 CDS product transcriptional regulator, MerR family transl_table 11 protein_id gb|AEB82480.1||gnl|jgi|Alide2_0040 note TIGRFAM: Cu(I)-responsive transcriptional regulator~PFAM: Transcription regulator MerR, DNA binding; HTH transcriptional regulator, MerR~KEGG: dia:Dtpsy_0035 transcriptional regulator, MerR family~SMART: HTH transcriptional regulator, MerR inference protein motif:TFAM:TIGR02044 db_xref GO:0003677 db_xref GO:0005507 db_xref GO:0016563 db_xref InterPro:IPR000551 db_xref InterPro:IPR011789 db_xref InterPro:IPR015358 49325 49128 gene locus_tag Alide2_0041 49325 49128 CDS product Heavy metal transport/detoxification protein transl_table 11 protein_id gb|AEB82481.1||gnl|jgi|Alide2_0041 note PFAM: Heavy metal transport/detoxification protein~KEGG: dia:Dtpsy_0036 heavy metal transport/detoxification protein inference protein motif:PFAM:PF00403 db_xref GO:0046872 db_xref InterPro:IPR006121 49495 51726 gene locus_tag Alide2_0042 49495 51726 CDS product heavy metal translocating P-type ATPase EC_number 3.6.3.4 transl_table 11 protein_id gb|AEB82482.1||gnl|jgi|Alide2_0042 note TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P type, cation/copper-transporter; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter~KEGG: dia:Dtpsy_0037 heavy metal translocating P-type ATPase~PFAM: ATPase, P-type, ATPase-associated domain; Heavy metal transport/detoxification protein; Haloacid dehalogenase-like hydrolase inference protein motif:TFAM:TIGR01525 db_xref GO:0004008 db_xref GO:0005524 db_xref GO:0046873 db_xref InterPro:IPR001757 db_xref InterPro:IPR005834 db_xref InterPro:IPR006121 db_xref InterPro:IPR006403 db_xref InterPro:IPR006416 db_xref InterPro:IPR008250 51853 53502 gene locus_tag Alide2_0043 51853 53502 CDS product methyl-accepting chemotaxis sensory transducer transl_table 11 protein_id gb|AEB82483.1||gnl|jgi|Alide2_0043 note KEGG: ajs:Ajs_0020 methyl-accepting chemotaxis sensory transducer~PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain~SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain inference protein motif:PFAM:PF00015 db_xref GO:0004871 db_xref InterPro:IPR003660 db_xref InterPro:IPR004089 56753 53658 gene locus_tag Alide2_0044 56753 53658 CDS product heavy metal efflux pump, CzcA family transl_table 11 protein_id gb|AEB82484.1||gnl|jgi|Alide2_0044 note KEGG: aav:Aave_0038 CzcA family heavy metal efflux protein~TIGRFAM: Heavy metal efflux pump CzcA~PFAM: Acriflavin resistance protein inference protein motif:TFAM:TIGR00914 db_xref GO:0008324 db_xref InterPro:IPR001036 db_xref InterPro:IPR004763 57991 56750 gene locus_tag Alide2_0045 57991 56750 CDS product efflux transporter, RND family, MFP subunit transl_table 11 protein_id gb|AEB82485.1||gnl|jgi|Alide2_0045 note TIGRFAM: Secretion protein HlyD~KEGG: aav:Aave_0039 RND family efflux transporter MFP subunit inference protein motif:TFAM:TIGR01730 db_xref GO:0008565 db_xref InterPro:IPR006143 59264 58023 gene locus_tag Alide2_0046 59264 58023 CDS product outer membrane efflux protein transl_table 11 protein_id gb|AEB82486.1||gnl|jgi|Alide2_0046 note PFAM: Outer membrane efflux protein~KEGG: xtr:100485479 hypothetical protein LOC100485479 inference protein motif:PFAM:PF02321 db_xref GO:0005215 db_xref InterPro:IPR003423 59397 60122 gene locus_tag Alide2_0047 59397 60122 CDS product two component transcriptional regulator, winged helix family transl_table 11 protein_id gb|AEB82487.1||gnl|jgi|Alide2_0047 note KEGG: aav:Aave_0041 two component transcriptional regulator~PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal~SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal inference protein motif:PFAM:PF00072 db_xref GO:0000156 db_xref GO:0003677 db_xref InterPro:IPR001789 db_xref InterPro:IPR001867 60119 61546 gene locus_tag Alide2_0048 60119 61546 CDS product integral membrane sensor signal transduction histidine kinase transl_table 11 protein_id gb|AEB82488.1||gnl|jgi|Alide2_0048 note KEGG: aav:Aave_0042 integral membrane sensor signal transduction histidine kinase~PFAM: ATPase-like, ATP-binding domain; Two-component sensor kinase N-terminal; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain~SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain inference protein motif:PFAM:PF02518 db_xref GO:0000155 db_xref GO:0004871 db_xref GO:0005524 db_xref InterPro:IPR003594 db_xref InterPro:IPR003660 db_xref InterPro:IPR003661 db_xref InterPro:IPR013727 62687 61572 gene locus_tag Alide2_0049 62687 61572 CDS product 12-oxophytodienoate reductase EC_number 1.3.1.42 transl_table 11 protein_id gb|AEB82489.1||gnl|jgi|Alide2_0049 note KEGG: dia:Dtpsy_0040 NADH:flavin oxidoreductase/NADH oxidase~PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal inference protein motif:PRIAM:1.3.1.42 db_xref InterPro:IPR001155 63358 62750 gene locus_tag Alide2_0050 63358 62750 CDS product Glutathione S-transferase domain protein transl_table 11 protein_id gb|AEB82490.1||gnl|jgi|Alide2_0050 note PFAM: Glutathione S-transferase, C-terminal; Glutathione S-transferase, N-terminal~KEGG: dia:Dtpsy_0042 glutathione S-transferase domain protein inference protein motif:PFAM:PF00043 db_xref InterPro:IPR004045 db_xref InterPro:IPR004046 63687 63391 gene locus_tag Alide2_0051 63687 63391 CDS product protein of unknown function UPF0153 transl_table 11 protein_id gb|AEB82491.1||gnl|jgi|Alide2_0051 note PFAM: Uncharacterised protein family UPF0153~KEGG: dia:Dtpsy_0043 protein of unknown function UPF0153 inference protein motif:PFAM:PF03692 db_xref InterPro:IPR005358 64272 63694 gene locus_tag Alide2_0052 64272 63694 CDS product NADPH-dependent FMN reductase transl_table 11 protein_id gb|AEB82492.1||gnl|jgi|Alide2_0052 note PFAM: NADPH-dependent FMN reductase~KEGG: dia:Dtpsy_0044 NADPH-dependent FMN reductase inference protein motif:PFAM:PF03358 db_xref InterPro:IPR005025 64350 66383 gene locus_tag Alide2_0053 64350 66383 CDS product glucose inhibited division protein A transl_table 11 protein_id gb|AEB82493.1||gnl|jgi|Alide2_0053 note KEGG: dia:Dtpsy_0045 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA~TIGRFAM: Glucose-inhibited division protein A~PFAM: Glucose-inhibited division protein A-related inference protein motif:TFAM:TIGR00136 db_xref InterPro:IPR002218 db_xref InterPro:IPR004416 66367 66606 gene locus_tag Alide2_0054 66367 66606 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82494.1||gnl|jgi|Alide2_0054 note KEGG: pct:PC1_0787 hypothetical protein inference similar to AA sequence:KEGG:PC1_0787 66599 67246 gene locus_tag Alide2_0055 66599 67246 CDS product methyltransferase GidB transl_table 11 protein_id gb|AEB82495.1||gnl|jgi|Alide2_0055 note KEGG: dia:Dtpsy_0046 16S rRNA methyltransferase GidB~TIGRFAM: rRNA small subunit methyltransferase G~PFAM: rRNA small subunit methyltransferase G inference protein motif:TFAM:TIGR00138 db_xref GO:0008649 db_xref InterPro:IPR003682 67283 67897 gene locus_tag Alide2_0056 67283 67897 CDS product Lysine exporter protein (LYSE/YGGA) transl_table 11 protein_id gb|AEB82496.1||gnl|jgi|Alide2_0056 note PFAM: Lysine exporter protein (LYSE/YGGA)~KEGG: dia:Dtpsy_0047 lysine exporter protein (LysE/YggA) inference protein motif:PFAM:PF01810 db_xref InterPro:IPR001123 67906 68676 gene locus_tag Alide2_0057 67906 68676 CDS product Cobyrinic acid ac-diamide synthase transl_table 11 protein_id gb|AEB82497.1||gnl|jgi|Alide2_0057 note PFAM: Cobyrinic acid a,c-diamide synthase~KEGG: dia:Dtpsy_0048 cobyrinic acid ac-diamide synthase inference protein motif:PFAM:PF01656 db_xref InterPro:IPR002586 68761 69303 gene locus_tag Alide2_0058 68761 69303 CDS product protein of unknown function DUF1234 transl_table 11 protein_id gb|AEB82498.1||gnl|jgi|Alide2_0058 note PFAM: Protein of unknown function DUF1234~KEGG: ajs:Ajs_0030 hypothetical protein inference protein motif:PFAM:PF06821 db_xref InterPro:IPR010662 69309 70226 gene locus_tag Alide2_0059 69309 70226 CDS product parB-like partition protein transl_table 11 protein_id gb|AEB82499.1||gnl|jgi|Alide2_0059 note TIGRFAM: ParB-like partition protein~PFAM: ParB-like nuclease~KEGG: aav:Aave_0056 chromosome segregation DNA-binding protein~SMART: ParB-like nuclease inference protein motif:TFAM:TIGR00180 db_xref GO:0003677 db_xref InterPro:IPR003115 db_xref InterPro:IPR004437 70251 71030 gene locus_tag Alide2_0060 70251 71030 CDS product methyltransferase type 12 transl_table 11 protein_id gb|AEB82500.1||gnl|jgi|Alide2_0060 note KEGG: ajs:Ajs_0032 methyltransferase type 12 inference similar to AA sequence:KEGG:Ajs_0032 71090 72130 gene locus_tag Alide2_0061 71090 72130 CDS product Peptidoglycan-binding domain 1 protein transl_table 11 protein_id gb|AEB82501.1||gnl|jgi|Alide2_0061 note PFAM: Peptidoglycan binding-like~KEGG: dia:Dtpsy_0052 peptidoglycan-binding domain 1 protein inference protein motif:PFAM:PF01471 db_xref InterPro:IPR002477 73115 72210 gene locus_tag Alide2_0062 73115 72210 CDS product AraC protein arabinose-binding/dimerization transl_table 11 protein_id gb|AEB82502.1||gnl|jgi|Alide2_0062 note KEGG: dia:Dtpsy_0054 transcriptional regulator, AraC family~PFAM: HTH transcriptional regulator, AraC, arabinose-binding/dimerisation~SMART: Helix-turn-helix, AraC type, DNA binding domain inference protein motif:PFAM:PF02311 db_xref InterPro:IPR003313 db_xref InterPro:IPR018060 73175 74440 gene locus_tag Alide2_0063 73175 74440 CDS product major facilitator superfamily MFS_1 transl_table 11 protein_id gb|AEB82503.1||gnl|jgi|Alide2_0063 note PFAM: Major facilitator superfamily MFS-1~KEGG: dia:Dtpsy_0055 major facilitator superfamily MFS_1 inference protein motif:PFAM:PF07690 db_xref InterPro:IPR011701 75251 74442 gene locus_tag Alide2_0064 75251 74442 CDS product MscS Mechanosensitive ion channel transl_table 11 protein_id gb|AEB82504.1||gnl|jgi|Alide2_0064 note PFAM: Mechanosensitive ion channel MscS~KEGG: bpy:Bphyt_0752 MscS mechanosensitive ion channel inference protein motif:PFAM:PF00924 db_xref InterPro:IPR006685 75330 75425 gene locus_tag Alide2_0065 75330 75425 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82505.1||gnl|jgi|Alide2_0065 inference ab initio prediction:Prodigal:1.4 76874 75450 gene locus_tag Alide2_0066 76874 75450 CDS product D-lactate dehydrogenase (cytochrome) EC_number 1.1.2.4 transl_table 11 protein_id gb|AEB82506.1||gnl|jgi|Alide2_0066 note KEGG: ajs:Ajs_0040 fis family transcriptional regulator~PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal inference protein motif:PRIAM:1.1.2.4 db_xref InterPro:IPR004113 db_xref InterPro:IPR006094 77204 76968 gene locus_tag Alide2_0067 77204 76968 CDS product calcium-binding EF-hand-containing protein transl_table 11 protein_id gb|AEB82507.1||gnl|jgi|Alide2_0067 note KEGG: dia:Dtpsy_0062 calcium-binding EF-hand-containing protein inference similar to AA sequence:KEGG:Dtpsy_0062 77362 77937 gene locus_tag Alide2_0068 77362 77937 CDS product ATP/cobalamin adenosyltransferase EC_number 2.5.1.17 transl_table 11 protein_id gb|AEB82508.1||gnl|jgi|Alide2_0068 note TIGRFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, PduO-type, N-terminal~KEGG: dia:Dtpsy_0063 ATP/cobalamin adenosyltransferase~PFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, EutT/PduO type inference protein motif:TFAM:TIGR00636 db_xref GO:0005524 db_xref GO:0008817 db_xref InterPro:IPR002779 db_xref InterPro:IPR017858 78420 77998 gene locus_tag Alide2_0069 78420 77998 CDS product phenylacetic acid degradation-related protein transl_table 11 protein_id gb|AEB82509.1||gnl|jgi|Alide2_0069 note KEGG: ajs:Ajs_0044 hypothetical protein~TIGRFAM: Phenylacetic acid degradation-related protein~PFAM: Thioesterase superfamily inference protein motif:TFAM:TIGR00369 db_xref InterPro:IPR003736 db_xref InterPro:IPR006683 79969 78503 gene locus_tag Alide2_0070 79969 78503 CDS product succinate CoA transferase EC_number 3.1.2.1 transl_table 11 protein_id gb|AEB82510.1||gnl|jgi|Alide2_0070 note TIGRFAM: Succinate CoA transferase~KEGG: ajs:Ajs_0046 acetyl-CoA hydrolase~PFAM: Acetyl-CoA hydrolase/transferase inference protein motif:TFAM:TIGR03458 db_xref InterPro:IPR003702 db_xref InterPro:IPR017821 80181 80903 gene locus_tag Alide2_0071 80181 80903 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82511.1||gnl|jgi|Alide2_0071 note KEGG: dia:Dtpsy_0067 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_0067 80958 81872 gene locus_tag Alide2_0072 80958 81872 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB82512.1||gnl|jgi|Alide2_0072 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: rme:Rmet_5369 putative LysR family transcriptional regulator inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 81997 83007 gene locus_tag Alide2_0073 81997 83007 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82513.1||gnl|jgi|Alide2_0073 note KEGG: reu:Reut_B4598 hypothetical protein inference similar to AA sequence:KEGG:Reut_B4598 db_xref InterPro:IPR005064 db_xref InterPro:IPR006311 83056 83862 gene locus_tag Alide2_0074 83056 83862 CDS product 3-oxoacyl-(acyl-carrier-protein) reductase EC_number 1.1.1.100 transl_table 11 protein_id gb|AEB82514.1||gnl|jgi|Alide2_0074 note KEGG: bbr:BB2766 putative short chain dehydrogenase~PFAM: Short-chain dehydrogenase/reductase SDR inference protein motif:PRIAM:1.1.1.100 db_xref InterPro:IPR002198 83864 84625 gene locus_tag Alide2_0075 83864 84625 CDS product 3-oxoacyl-(acyl-carrier-protein) reductase EC_number 1.1.1.100 transl_table 11 protein_id gb|AEB82515.1||gnl|jgi|Alide2_0075 note KEGG: vap:Vapar_0736 short-chain dehydrogenase/reductase SDR~PFAM: Short-chain dehydrogenase/reductase SDR inference protein motif:PRIAM:1.1.1.100 db_xref InterPro:IPR002198 84657 85172 gene locus_tag Alide2_0076 84657 85172 CDS product Carboxymuconolactone decarboxylase transl_table 11 protein_id gb|AEB82516.1||gnl|jgi|Alide2_0076 note PFAM: Carboxymuconolactone decarboxylase~KEGG: axy:AXYL_01971 carboxymuconolactone decarboxylase family protein 2 inference protein motif:PFAM:PF02627 db_xref InterPro:IPR003779 86465 85179 gene locus_tag Alide2_0077 86465 85179 CDS product uracil-xanthine permease transl_table 11 protein_id gb|AEB82517.1||gnl|jgi|Alide2_0077 note KEGG: ajs:Ajs_0048 uracil-xanthine permease~TIGRFAM: Xanthine/uracil permease~PFAM: Xanthine/uracil/vitamin C permease inference protein motif:TFAM:TIGR00801 db_xref GO:0005215 db_xref InterPro:IPR006042 db_xref InterPro:IPR006043 86617 87327 gene locus_tag Alide2_0078 86617 87327 CDS product methyltransferase FkbM family transl_table 11 protein_id gb|AEB82518.1||gnl|jgi|Alide2_0078 note TIGRFAM: Methyltransferase FkbM~KEGG: sna:Snas_6312 methyltransferase FkbM family inference protein motif:TFAM:TIGR01444 db_xref InterPro:IPR006342 88722 87454 gene locus_tag Alide2_0079 88722 87454 CDS product Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family transl_table 11 protein_id gb|AEB82519.1||gnl|jgi|Alide2_0079 note KEGG: ajs:Ajs_0052 hypothetical protein~TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6~PFAM: Monooxygenase, FAD-binding inference protein motif:TFAM:TIGR01988 db_xref GO:0005215 db_xref GO:0050660 db_xref InterPro:IPR002938 db_xref InterPro:IPR010971 88892 90967 gene locus_tag Alide2_0080 88892 90967 CDS product acetoacetyl-CoA synthase EC_number 6.2.1.16 transl_table 11 protein_id gb|AEB82520.1||gnl|jgi|Alide2_0080 note TIGRFAM: Acetoacetyl-CoA synthase~KEGG: dia:Dtpsy_0074 acetoacetyl-CoA synthetase~PFAM: AMP-dependent synthetase/ligase inference protein motif:TFAM:TIGR01217 db_xref GO:0030729 db_xref InterPro:IPR000873 db_xref InterPro:IPR005914 91928 90999 gene locus_tag Alide2_0081 91928 90999 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB82521.1||gnl|jgi|Alide2_0081 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: ajs:Ajs_0055 LysR family transcriptional regulator inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 92044 93030 gene locus_tag Alide2_0082 92044 93030 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82522.1||gnl|jgi|Alide2_0082 note KEGG: ajs:Ajs_0056 hypothetical protein inference similar to AA sequence:KEGG:Ajs_0056 db_xref InterPro:IPR005064 93056 94213 gene locus_tag Alide2_0083 93056 94213 CDS product Isovaleryl-CoA dehydrogenase EC_number 1.3.99.10 transl_table 11 protein_id gb|AEB82523.1||gnl|jgi|Alide2_0083 note KEGG: ajs:Ajs_0061 acyl-CoA dehydrogenase domain-containing protein~PFAM: Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA oxidase/dehydrogenase, type 1 inference protein motif:PRIAM:1.3.99.10 db_xref InterPro:IPR006090 db_xref InterPro:IPR006091 db_xref InterPro:IPR006092 94233 95258 gene locus_tag Alide2_0084 94233 95258 CDS product acyl-CoA dehydrogenase domain-containing protein transl_table 11 protein_id gb|AEB82524.1||gnl|jgi|Alide2_0084 note PFAM: Acyl-CoA oxidase/dehydrogenase, type 1~KEGG: ajs:Ajs_0062 acyl-CoA dehydrogenase domain-containing protein inference protein motif:PFAM:PF00441 db_xref GO:0003995 db_xref InterPro:IPR006090 95364 96152 gene locus_tag Alide2_0085 95364 96152 CDS product Enoyl-CoA hydratase/isomerase transl_table 11 protein_id gb|AEB82525.1||gnl|jgi|Alide2_0085 note PFAM: Crotonase, core~KEGG: ajs:Ajs_0063 enoyl-CoA hydratase inference protein motif:PFAM:PF00378 db_xref GO:0003824 db_xref InterPro:IPR001753 96182 96805 gene locus_tag Alide2_0086 96182 96805 CDS product CDP-diacylglycerol/serine O-phosphatidyltransferase transl_table 11 protein_id gb|AEB82526.1||gnl|jgi|Alide2_0086 note manually curated~TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase~KEGG: dia:Dtpsy_0083 CDP-diacylglycerol/serine O-phosphatidyltransferase~PFAM: CDP-alcohol phosphatidyltransferase inference protein motif:TFAM:TIGR00473 db_xref GO:0003882 db_xref InterPro:IPR000462 db_xref InterPro:IPR004533 97041 98677 gene locus_tag Alide2_0087 pseudo 98704 99254 gene locus_tag Alide2_0088 pseudo 99251 99466 gene locus_tag Alide2_0089 99251 99466 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82527.1||gnl|jgi|Alide2_0089 note KEGG: rpt:Rpal_2080 hypothetical protein inference similar to AA sequence:KEGG:Rpal_2080 99634 100413 gene locus_tag Alide2_0090 99634 100413 CDS product septum site-determining protein minC transl_table 11 protein_id gb|AEB82528.1||gnl|jgi|Alide2_0090 note TIGRFAM: Septum formation inhibitor MinC~HAMAP: Septum formation inhibitor MinC~KEGG: dia:Dtpsy_0084 septum site-determining protein MinC~PFAM: Septum formation inhibitor MinC, C-terminal; Septum formation inhibitor MinC, N-terminal inference protein motif:HAMAP:MF_00267 db_xref InterPro:IPR005526 db_xref InterPro:IPR007874 db_xref InterPro:IPR013033 100468 101283 gene locus_tag Alide2_0091 100468 101283 CDS product septum site-determining protein MinD transl_table 11 protein_id gb|AEB82529.1||gnl|jgi|Alide2_0091 note KEGG: dia:Dtpsy_0085 septum site-determining protein MinD~TIGRFAM: Septum site-determining protein MinD~PFAM: Cobyrinic acid a,c-diamide synthase inference protein motif:TFAM:TIGR01968 db_xref GO:0016887 db_xref InterPro:IPR002586 db_xref InterPro:IPR010223 101290 101559 gene locus_tag Alide2_0092 101290 101559 CDS product cell division topological specificity factor MinE transl_table 11 protein_id gb|AEB82530.1||gnl|jgi|Alide2_0092 note KEGG: dia:Dtpsy_0086 cell division topological specificity factor MinE~TIGRFAM: Septum formation topological specificity factor MinE~PFAM: Septum formation topological specificity factor MinE inference protein motif:TFAM:TIGR01215 db_xref InterPro:IPR005527 102508 101570 gene locus_tag Alide2_0093 102508 101570 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB82531.1||gnl|jgi|Alide2_0093 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: pna:Pnap_1015 LysR family transcriptional regulator inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 102622 103599 gene locus_tag Alide2_0094 102622 103599 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82532.1||gnl|jgi|Alide2_0094 note KEGG: pol:Bpro_4513 hypothetical protein inference similar to AA sequence:KEGG:Bpro_4513 db_xref InterPro:IPR005064 103627 104790 gene locus_tag Alide2_0095 103627 104790 CDS product Galactonate dehydratase EC_number 4.2.1.6 transl_table 11 protein_id gb|AEB82533.1||gnl|jgi|Alide2_0095 note PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal; Mandelate racemase/muconate lactonizing enzyme, C-terminal~KEGG: mes:Meso_4537 galactonate dehydratase~SMART: Mandelate racemase/muconate lactonizing enzyme, C-terminal inference protein motif:PRIAM:4.2.1.6 db_xref InterPro:IPR013341 db_xref InterPro:IPR013342 105347 104808 gene locus_tag Alide2_0096 105347 104808 CDS product flavin reductase domain protein FMN-binding protein transl_table 11 protein_id gb|AEB82534.1||gnl|jgi|Alide2_0096 note manually curated~PFAM: Flavin reductase-like, FMN-binding~KEGG: ajs:Ajs_0068 flavin reductase domain-containing protein~SMART: Flavin reductase-like, FMN-binding inference protein motif:PFAM:PF01613 db_xref InterPro:IPR002563 105454 106230 gene locus_tag Alide2_0097 105454 106230 CDS product alpha/beta hydrolase fold protein transl_table 11 protein_id gb|AEB82535.1||gnl|jgi|Alide2_0097 note PFAM: Alpha/beta hydrolase fold-1~KEGG: dia:Dtpsy_0088 alpha/beta hydrolase fold protein inference protein motif:PFAM:PF00561 db_xref InterPro:IPR000073 106304 106969 gene locus_tag Alide2_0098 106304 106969 CDS product regulatory protein TetR transl_table 11 protein_id gb|AEB82536.1||gnl|jgi|Alide2_0098 note PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal~KEGG: ajs:Ajs_0073 TetR family transcriptional regulator inference protein motif:PFAM:PF00440 db_xref GO:0003700 db_xref InterPro:IPR001647 107339 106917 gene locus_tag Alide2_0099 107339 106917 CDS product UspA domain-containing protein transl_table 11 protein_id gb|AEB82537.1||gnl|jgi|Alide2_0099 note PFAM: UspA~KEGG: ajs:Ajs_0074 UspA domain-containing protein inference protein motif:PFAM:PF00582 db_xref InterPro:IPR006016 108289 107441 gene locus_tag Alide2_0100 108289 107441 CDS product metallophosphoesterase transl_table 11 protein_id gb|AEB82538.1||gnl|jgi|Alide2_0100 note PFAM: Metallo-dependent phosphatase~KEGG: ajs:Ajs_0075 metallophosphoesterase inference protein motif:PFAM:PF00149 db_xref GO:0016787 db_xref InterPro:IPR004843 109287 108316 gene locus_tag Alide2_0101 109287 108316 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB82539.1||gnl|jgi|Alide2_0101 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: ajs:Ajs_0076 LysR family transcriptional regulator inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 109413 109853 gene locus_tag Alide2_0102 109413 109853 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82540.1||gnl|jgi|Alide2_0102 note KEGG: ajs:Ajs_0077 hypothetical protein inference similar to AA sequence:KEGG:Ajs_0077 111861 109993 gene locus_tag Alide2_0103 111861 109993 CDS product Phosphoenolpyruvate carboxykinase (GTP) EC_number 4.1.1.32 transl_table 11 protein_id gb|AEB82541.1||gnl|jgi|Alide2_0103 note KEGG: dac:Daci_0114 phosphoenolpyruvate carboxykinase~PFAM: Phosphoenolpyruvate carboxykinase, GTP-utilising inference protein motif:PRIAM:4.1.1.32 db_xref InterPro:IPR008209 112363 112202 gene locus_tag Alide2_0104 112363 112202 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82542.1||gnl|jgi|Alide2_0104 note KEGG: dia:Dtpsy_0098 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_0098 113652 112453 gene locus_tag Alide2_0105 113652 112453 CDS product threonine dehydratase transl_table 11 protein_id gb|AEB82543.1||gnl|jgi|Alide2_0105 note KEGG: dia:Dtpsy_0099 threonine dehydratase~TIGRFAM: Threonine dehydratase II~PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; Amino acid-binding ACT inference protein motif:TFAM:TIGR01127 db_xref GO:0004794 db_xref InterPro:IPR001926 db_xref InterPro:IPR002912 db_xref InterPro:IPR005789 115416 113755 gene locus_tag Alide2_0106 115416 113755 CDS product acyl-CoA dehydrogenase domain-containing protein transl_table 11 protein_id gb|AEB82544.1||gnl|jgi|Alide2_0106 note PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain~KEGG: ajs:Ajs_0081 acyl-CoA dehydrogenase domain-containing protein inference protein motif:PFAM:PF00441 db_xref GO:0003995 db_xref InterPro:IPR006090 db_xref InterPro:IPR006091 118192 115472 gene locus_tag Alide2_0107 118192 115472 CDS product magnesium-translocating P-type ATPase EC_number 3.6.3.2 transl_table 11 protein_id gb|AEB82545.1||gnl|jgi|Alide2_0107 note SMART: ATPase, P-type cation-transporter, N-terminal~TIGRFAM: ATPase, P-type, magnesium-translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter~KEGG: pfl:PFL_4078 magnesium-transporting ATPase MgtA~PFAM: ATPase, P-type, ATPase-associated domain; ATPase, P-type cation-transporter, N-terminal; Haloacid dehalogenase-like hydrolase; ATPase, P-type cation-transporter, C-terminal inference protein motif:TFAM:TIGR01524 db_xref GO:0005524 db_xref GO:0015444 db_xref InterPro:IPR001757 db_xref InterPro:IPR004014 db_xref InterPro:IPR005834 db_xref InterPro:IPR006068 db_xref InterPro:IPR006415 db_xref InterPro:IPR008250 119358 118327 gene locus_tag Alide2_0108 119358 118327 CDS product Methionine synthase EC_number 2.1.1.13 transl_table 11 protein_id gb|AEB82546.1||gnl|jgi|Alide2_0108 note KEGG: ajs:Ajs_0083 methionine synthase (B12-dependent)~PFAM: Homocysteine S-methyltransferase inference protein motif:PRIAM:2.1.1.13 db_xref InterPro:IPR003726 120356 119355 gene locus_tag Alide2_0109 120356 119355 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB82547.1||gnl|jgi|Alide2_0109 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: aav:Aave_0175 LysR family transcriptional regulator inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 121544 120381 gene locus_tag Alide2_0110 121544 120381 CDS product Butyryl-CoA dehydrogenase EC_number 1.3.8.1 transl_table 11 protein_id gb|AEB82548.1||gnl|jgi|Alide2_0110 note KEGG: aav:Aave_0176 acyl-CoA dehydrogenase domain-containing protein~PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain inference protein motif:PRIAM:1.3.99.2 db_xref InterPro:IPR006090 db_xref InterPro:IPR006091 db_xref InterPro:IPR006092 121924 121541 gene locus_tag Alide2_0111 121924 121541 CDS product Cupin 2 conserved barrel domain protein transl_table 11 protein_id gb|AEB82549.1||gnl|jgi|Alide2_0111 note PFAM: Cupin 2, conserved barrel~KEGG: aav:Aave_0177 cupin 2 domain-containing protein inference protein motif:PFAM:PF07883 db_xref InterPro:IPR013096 122906 121941 gene locus_tag Alide2_0112 122906 121941 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82550.1||gnl|jgi|Alide2_0112 note KEGG: xtr:100487983 UPF0065 protein in clcB-clcD intergenic region-like inference similar to AA sequence:KEGG:100487983 db_xref InterPro:IPR005064 123164 125032 gene locus_tag Alide2_0113 123164 125032 CDS product ATP-dependent DNA helicase RecQ transl_table 11 protein_id gb|AEB82551.1||gnl|jgi|Alide2_0113 note TIGRFAM: DNA helicase, ATP-dependent, RecQ type, bacterial; DNA helicase, ATP-dependent, RecQ type~PFAM: RQC domain; Helicase, C-terminal; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase/RNase D C-terminal, HRDC domain~KEGG: dia:Dtpsy_0103 ATP-dependent DNA helicase RecQ~SMART: RQC domain; Helicase, C-terminal; DEAD-like helicase, N-terminal; Helicase/RNase D C-terminal, HRDC domain inference protein motif:TFAM:TIGR01389 db_xref GO:0004003 db_xref GO:0008026 db_xref InterPro:IPR001650 db_xref InterPro:IPR002121 db_xref InterPro:IPR004589 db_xref InterPro:IPR006293 db_xref InterPro:IPR011545 db_xref InterPro:IPR014001 db_xref InterPro:IPR018982 125716 125036 gene locus_tag Alide2_0114 125716 125036 CDS product anaerobic ribonucleoside-triphosphate reductase activating protein transl_table 11 protein_id gb|AEB82552.1||gnl|jgi|Alide2_0114 note KEGG: ajs:Ajs_0085 anaerobic ribonucleoside-triphosphate reductase activating protein~TIGRFAM: Ribonucleoside-triphosphate reductase, anaerobic-like~PFAM: Radical SAM inference protein motif:TFAM:TIGR02495 db_xref InterPro:IPR007197 db_xref InterPro:IPR012840 125894 125694 gene locus_tag Alide2_0115 125894 125694 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82553.1||gnl|jgi|Alide2_0115 note KEGG: dia:Dtpsy_0105 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_0105 128007 125977 gene locus_tag Alide2_0116 128007 125977 CDS product anaerobic ribonucleoside-triphosphate reductase transl_table 11 protein_id gb|AEB82554.1||gnl|jgi|Alide2_0116 note KEGG: dia:Dtpsy_0106 anaerobic ribonucleoside triphosphate reductase~TIGRFAM: Ribonucleoside-triphosphate reductase, anaerobic~PFAM: ATP-cone inference protein motif:TFAM:TIGR02487 db_xref GO:0008998 db_xref GO:0016491 db_xref InterPro:IPR005144 db_xref InterPro:IPR012833 131434 128132 gene locus_tag Alide2_0117 131434 128132 CDS product diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) transl_table 11 protein_id gb|AEB82555.1||gnl|jgi|Alide2_0117 note TIGRFAM: Diguanylate cyclase, predicted; PAS~PFAM: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS fold; PAS fold-4~KEGG: ajs:Ajs_0088 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)~SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAC motif; PAS inference protein motif:TFAM:TIGR00254 db_xref GO:0004871 db_xref InterPro:IPR000014 db_xref InterPro:IPR000160 db_xref InterPro:IPR001610 db_xref InterPro:IPR001633 db_xref InterPro:IPR013656 db_xref InterPro:IPR013767 132148 131720 gene locus_tag Alide2_0118 132148 131720 CDS product Hemerythrin HHE cation binding domain protein transl_table 11 protein_id gb|AEB82556.1||gnl|jgi|Alide2_0118 note PFAM: Haemerythrin/HHE cation-binding motif~KEGG: dia:Dtpsy_0108 hemerythrin HHE cation binding domain-containing protein inference protein motif:PFAM:PF01814 db_xref InterPro:IPR012312 134527 132218 gene locus_tag Alide2_0119 134527 132218 CDS product nitric oxide reductase large subunit transl_table 11 protein_id gb|AEB82557.1||gnl|jgi|Alide2_0119 note KEGG: dia:Dtpsy_0109 nitric oxide reductase large subunit inference similar to AA sequence:KEGG:Dtpsy_0109 134679 136280 gene locus_tag Alide2_0120 134679 136280 CDS product sigma54 specific transcriptional regulator, Fis family transl_table 11 protein_id gb|AEB82558.1||gnl|jgi|Alide2_0120 note KEGG: dia:Dtpsy_0110 anaerobic nitric oxide reductase transcription regulator~PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type~SMART: ATPase, AAA+ type, core inference protein motif:PFAM:PF00158 db_xref GO:0003700 db_xref GO:0005524 db_xref GO:0008134 db_xref InterPro:IPR002078 db_xref InterPro:IPR002197 db_xref InterPro:IPR003593 136995 136333 gene locus_tag Alide2_0121 136995 136333 CDS product Domain of unknown function DUF1794 transl_table 11 protein_id gb|AEB82559.1||gnl|jgi|Alide2_0121 note PFAM: Domain of unknown function DUF1794~KEGG: ctt:CtCNB1_2843 hypothetical protein inference protein motif:PFAM:PF08768 db_xref InterPro:IPR014878 137233 138621 gene locus_tag Alide2_0122 137233 138621 CDS product L-serine dehydratase 1 EC_number 4.3.1.17 transl_table 11 protein_id gb|AEB82560.1||gnl|jgi|Alide2_0122 note TIGRFAM: Iron-sulphur-dependent L-serine dehydratase single chain form~KEGG: dia:Dtpsy_0112 L-serine dehydratase 1~PFAM: Serine dehydratase-like, alpha subunit; Serine dehydratase beta chain inference protein motif:TFAM:TIGR00720 db_xref GO:0003941 db_xref InterPro:IPR004644 db_xref InterPro:IPR005130 db_xref InterPro:IPR005131 138753 139703 gene locus_tag Alide2_0123 138753 139703 CDS product protein bugT-like protein transl_table 11 protein_id gb|AEB82561.1||gnl|jgi|Alide2_0123 note KEGG: xtr:100490070 protein bugT-like inference similar to AA sequence:KEGG:100490070 db_xref InterPro:IPR005064 139708 141282 gene locus_tag Alide2_0124 139708 141282 CDS product o-succinylbenzoate--CoA ligase EC_number 6.2.1.26 transl_table 11 protein_id gb|AEB82562.1||gnl|jgi|Alide2_0124 note KEGG: ajs:Ajs_0098 AMP-dependent synthetase and ligase~PFAM: AMP-dependent synthetase/ligase inference protein motif:PRIAM:6.2.1.26 db_xref InterPro:IPR000873 141300 142292 gene locus_tag Alide2_0125 141300 142292 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82563.1||gnl|jgi|Alide2_0125 note KEGG: ajs:Ajs_0099 hypothetical protein inference similar to AA sequence:KEGG:Ajs_0099 db_xref InterPro:IPR005064 142305 142760 gene locus_tag Alide2_0126 142305 142760 CDS product phenylacetic acid degradation-related protein transl_table 11 protein_id gb|AEB82564.1||gnl|jgi|Alide2_0126 note KEGG: dia:Dtpsy_0117 thioesterase superfamily protein~TIGRFAM: Phenylacetic acid degradation-related protein~PFAM: Thioesterase superfamily inference protein motif:TFAM:TIGR00369 db_xref InterPro:IPR003736 db_xref InterPro:IPR006683 143792 142782 gene locus_tag Alide2_0127 143792 142782 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82565.1||gnl|jgi|Alide2_0127 note KEGG: dia:Dtpsy_0118 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_0118 db_xref InterPro:IPR005064 db_xref InterPro:IPR006311 144818 143832 gene locus_tag Alide2_0128 144818 143832 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82566.1||gnl|jgi|Alide2_0128 note KEGG: dia:Dtpsy_0119 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_0119 db_xref InterPro:IPR005064 146005 144851 gene locus_tag Alide2_0129 146005 144851 CDS product Long-chain-acyl-CoA dehydrogenase EC_number 1.3.99.13 transl_table 11 protein_id gb|AEB82567.1||gnl|jgi|Alide2_0129 note KEGG: ajs:Ajs_0103 acyl-CoA dehydrogenase domain-containing protein~PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain inference protein motif:PRIAM:1.3.99.13 db_xref InterPro:IPR006090 db_xref InterPro:IPR006091 db_xref InterPro:IPR006092 147628 146081 gene locus_tag Alide2_0130 147628 146081 CDS product o-succinylbenzoate--CoA ligase EC_number 6.2.1.26 transl_table 11 protein_id gb|AEB82568.1||gnl|jgi|Alide2_0130 note KEGG: ajs:Ajs_0104 AMP-dependent synthetase and ligase~PFAM: AMP-dependent synthetase/ligase inference protein motif:PRIAM:6.2.1.26 db_xref InterPro:IPR000873 147834 149012 gene locus_tag Alide2_0131 147834 149012 CDS product acetyl-CoA acetyltransferase EC_number 2.3.1.16 transl_table 11 protein_id gb|AEB82569.1||gnl|jgi|Alide2_0131 note TIGRFAM: Thiolase~KEGG: dia:Dtpsy_0122 acetyl-CoA acetyltransferase~PFAM: Thiolase, N-terminal; Thiolase, C-terminal inference protein motif:TFAM:TIGR01930 db_xref GO:0003941 db_xref InterPro:IPR002155 db_xref InterPro:IPR020616 db_xref InterPro:IPR020617 149068 149835 gene locus_tag Alide2_0132 149068 149835 CDS product 3-hydroxy-2-methylbutyryl-CoA dehydrogenase EC_number 1.1.1.178 transl_table 11 protein_id gb|AEB82570.1||gnl|jgi|Alide2_0132 note KEGG: ajs:Ajs_0106 short-chain dehydrogenase/reductase SDR~PFAM: Short-chain dehydrogenase/reductase SDR inference protein motif:PRIAM:1.1.1.178 db_xref InterPro:IPR002198 149904 150902 gene locus_tag Alide2_0133 149904 150902 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82571.1||gnl|jgi|Alide2_0133 note KEGG: dia:Dtpsy_0125 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_0125 db_xref InterPro:IPR005064 150912 151718 gene locus_tag Alide2_0134 150912 151718 CDS product 2,4-dienoyl-CoA reductase (NADPH) EC_number 1.3.1.34 transl_table 11 protein_id gb|AEB82572.1||gnl|jgi|Alide2_0134 note KEGG: ajs:Ajs_0109 short-chain dehydrogenase/reductase SDR~PFAM: Short-chain dehydrogenase/reductase SDR inference protein motif:PRIAM:1.3.1.34 db_xref InterPro:IPR002198 151715 151819 gene locus_tag Alide2_0135 151715 151819 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82573.1||gnl|jgi|Alide2_0135 inference ab initio prediction:Prodigal:1.4 151856 152635 gene locus_tag Alide2_0136 151856 152635 CDS product transcriptional regulator, IclR family transl_table 11 protein_id gb|AEB82574.1||gnl|jgi|Alide2_0136 note KEGG: dia:Dtpsy_0128 transcriptional regulator, IclR family~PFAM: Transcription regulator IclR, N-terminal; Transcription regulator IclR, C-terminal~SMART: Transcription regulator IclR, N-terminal inference protein motif:PFAM:PF09339 db_xref GO:0003677 db_xref InterPro:IPR005471 db_xref InterPro:IPR014757 152730 153839 gene locus_tag Alide2_0137 152730 153839 CDS product Alpha-methylacyl-CoA racemase EC_number 5.1.99.4 transl_table 11 protein_id gb|AEB82575.1||gnl|jgi|Alide2_0137 note KEGG: ajs:Ajs_0112 L-carnitine dehydratase/bile acid-inducible protein F~PFAM: CoA-transferase family III inference protein motif:PRIAM:5.1.99.4 db_xref InterPro:IPR003673 154359 153943 gene locus_tag Alide2_0138 154359 153943 CDS product protein of unknown function DUF35 transl_table 11 protein_id gb|AEB82576.1||gnl|jgi|Alide2_0138 note PFAM: Domain of unknown function DUF35, OB-fold, C-terminal~KEGG: reh:H16_A2147 hypothetical protein inference protein motif:PFAM:PF01796 db_xref InterPro:IPR002878 155521 154361 gene locus_tag Alide2_0139 155521 154361 CDS product acetyl-CoA acetyltransferase transl_table 11 protein_id gb|AEB82577.1||gnl|jgi|Alide2_0139 note KEGG: reh:H16_A2148 acetyl-CoA acetyltransferase inference similar to AA sequence:KEGG:H16_A2148 156701 155544 gene locus_tag Alide2_0140 156701 155544 CDS product Long-chain-acyl-CoA dehydrogenase EC_number 1.3.99.13 transl_table 11 protein_id gb|AEB82578.1||gnl|jgi|Alide2_0140 note KEGG: reh:H16_A2149 acyl-CoA dehydrogenase, long-chain specific~PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal inference protein motif:PRIAM:1.3.99.13 db_xref InterPro:IPR006090 db_xref InterPro:IPR006091 db_xref InterPro:IPR006092 158277 156736 gene locus_tag Alide2_0141 158277 156736 CDS product o-succinylbenzoate--CoA ligase EC_number 6.2.1.26 transl_table 11 protein_id gb|AEB82579.1||gnl|jgi|Alide2_0141 note KEGG: reh:H16_A2150 long-chain-fatty-acid--CoA ligase~PFAM: AMP-dependent synthetase/ligase inference protein motif:PRIAM:6.2.1.26 db_xref InterPro:IPR000873 159199 158264 gene locus_tag Alide2_0142 159199 158264 CDS product 3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoAhydratase EC_number 4.2.1.107 transl_table 11 protein_id gb|AEB82580.1||gnl|jgi|Alide2_0142 note KEGG: reh:H16_A2151 putative acyl dehydratase~PFAM: MaoC-like dehydratase inference protein motif:PRIAM:4.2.1.107 db_xref InterPro:IPR002539 160140 159217 gene locus_tag Alide2_0143 160140 159217 CDS product 3-hydroxyacyl-CoA dehydrogenase EC_number 1.1.1.35 transl_table 11 protein_id gb|AEB82581.1||gnl|jgi|Alide2_0143 note KEGG: reh:H16_A2152 short chain dehydrogenase~PFAM: Short-chain dehydrogenase/reductase SDR inference protein motif:PRIAM:1.1.1.35 db_xref InterPro:IPR002198 161149 160166 gene locus_tag Alide2_0144 161149 160166 CDS product extra-cytoplasmic solute receptor transl_table 11 protein_id gb|AEB82582.1||gnl|jgi|Alide2_0144 note KEGG: reh:H16_A2153 extra-cytoplasmic solute receptor inference similar to AA sequence:KEGG:H16_A2153 db_xref InterPro:IPR005064 161379 162164 gene locus_tag Alide2_0145 161379 162164 CDS product transcriptional regulator, IclR family transl_table 11 protein_id gb|AEB82583.1||gnl|jgi|Alide2_0145 note KEGG: reh:H16_A2154 IclR family transcriptional regulator~PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal~SMART: Transcription regulator IclR, N-terminal inference protein motif:PFAM:PF01614 db_xref GO:0003677 db_xref InterPro:IPR005471 db_xref InterPro:IPR014757 163440 162184 gene locus_tag Alide2_0146 163440 162184 CDS product major facilitator superfamily MFS_1 transl_table 11 protein_id gb|AEB82584.1||gnl|jgi|Alide2_0146 note KEGG: ajs:Ajs_0113 major facilitator superfamily transporter~manually curated~PFAM: Major facilitator superfamily MFS-1 inference protein motif:PFAM:PF07690 db_xref InterPro:IPR011701 164344 163481 gene locus_tag Alide2_0147 164344 163481 CDS product Citryl-CoA lyase EC_number 4.1.3.34 transl_table 11 protein_id gb|AEB82585.1||gnl|jgi|Alide2_0147 note KEGG: dia:Dtpsy_0131 HpcH/HpaI aldolase~PFAM: Aldehyde-lyase domain inference protein motif:PRIAM:4.1.3.34 db_xref InterPro:IPR005000 165372 164377 gene locus_tag Alide2_0148 165372 164377 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82586.1||gnl|jgi|Alide2_0148 note KEGG: dia:Dtpsy_0133 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_0133 db_xref InterPro:IPR005064 166831 165446 gene locus_tag Alide2_0149 166831 165446 CDS product MmgE/PrpD family protein transl_table 11 protein_id gb|AEB82587.1||gnl|jgi|Alide2_0149 note PFAM: MmgE/PrpD~KEGG: dia:Dtpsy_0134 MmgE/PrpD family protein inference protein motif:PFAM:PF03972 db_xref GO:0047547 db_xref InterPro:IPR005656 168063 166882 gene locus_tag Alide2_0150 168063 166882 CDS product Formyl-CoA transferase EC_number 2.8.3.16 transl_table 11 protein_id gb|AEB82588.1||gnl|jgi|Alide2_0150 note KEGG: ajs:Ajs_0117 L-carnitine dehydratase/bile acid-inducible protein F~PFAM: CoA-transferase family III inference protein motif:PRIAM:2.8.3.16 db_xref InterPro:IPR003673 169240 168074 gene locus_tag Alide2_0151 169240 168074 CDS product Isovaleryl-CoA dehydrogenase EC_number 1.3.99.10 transl_table 11 protein_id gb|AEB82589.1||gnl|jgi|Alide2_0151 note KEGG: dac:Daci_0198 acyl-CoA dehydrogenase domain-containing protein~PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal inference protein motif:PRIAM:1.3.99.10 db_xref InterPro:IPR006090 db_xref InterPro:IPR006091 db_xref InterPro:IPR006092 170198 169314 gene locus_tag Alide2_0152 170198 169314 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82590.1||gnl|jgi|Alide2_0152 note KEGG: dia:Dtpsy_0137 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_0137 170392 171309 gene locus_tag Alide2_0153 170392 171309 CDS product 3-hydroxyacyl-CoA dehydrogenase EC_number 1.1.1.35 transl_table 11 protein_id gb|AEB82591.1||gnl|jgi|Alide2_0153 note KEGG: dia:Dtpsy_0138 short-chain dehydrogenase/reductase SDR~PFAM: Short-chain dehydrogenase/reductase SDR inference protein motif:PRIAM:1.1.1.35 db_xref InterPro:IPR002198 171313 172206 gene locus_tag Alide2_0154 171313 172206 CDS product 3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoAhydratase EC_number 4.2.1.107 transl_table 11 protein_id gb|AEB82592.1||gnl|jgi|Alide2_0154 note KEGG: ajs:Ajs_0121 dehydratase~PFAM: MaoC-like dehydratase inference protein motif:PRIAM:4.2.1.107 db_xref InterPro:IPR002539 172289 173083 gene locus_tag Alide2_0155 172289 173083 CDS product Enoyl-CoA hydratase/isomerase transl_table 11 protein_id gb|AEB82593.1||gnl|jgi|Alide2_0155 note PFAM: Crotonase, core~KEGG: dia:Dtpsy_0140 enoyl-CoA hydratase/isomerase inference protein motif:PFAM:PF00378 db_xref GO:0003824 db_xref InterPro:IPR001753 173220 174503 gene locus_tag Alide2_0156 173220 174503 CDS product acetyl-CoA hydrolase/transferase transl_table 11 protein_id gb|AEB82594.1||gnl|jgi|Alide2_0156 note PFAM: Acetyl-CoA hydrolase/transferase~KEGG: ajs:Ajs_0123 acetyl-CoA hydrolase/transferase inference protein motif:PFAM:PF02550 db_xref GO:0003824 db_xref InterPro:IPR003702 174570 175778 gene locus_tag Alide2_0157 174570 175778 CDS product acetyl-CoA acetyltransferase EC_number 2.3.1.9 transl_table 11 protein_id gb|AEB82595.1||gnl|jgi|Alide2_0157 note TIGRFAM: Thiolase~KEGG: ajs:Ajs_0124 acetyl-CoA acetyltransferase~PFAM: Thiolase, N-terminal; Thiolase, C-terminal inference protein motif:TFAM:TIGR01930 db_xref GO:0003824 db_xref InterPro:IPR002155 db_xref InterPro:IPR020616 db_xref InterPro:IPR020617 176716 175793 gene locus_tag Alide2_0158 176716 175793 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB82596.1||gnl|jgi|Alide2_0158 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: dac:Daci_0188 LysR family transcriptional regulator inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 176894 178078 gene locus_tag Alide2_0159 176894 178078 CDS product Formyl-CoA transferase EC_number 2.8.3.16 transl_table 11 protein_id gb|AEB82597.1||gnl|jgi|Alide2_0159 note KEGG: dac:Daci_0189 L-carnitine dehydratase/bile acid-inducible protein F~PFAM: CoA-transferase family III inference protein motif:PRIAM:2.8.3.16 db_xref InterPro:IPR003673 178093 179118 gene locus_tag Alide2_0160 178093 179118 CDS product NADPH:quinone reductase EC_number 1.6.5.5 transl_table 11 protein_id gb|AEB82598.1||gnl|jgi|Alide2_0160 note PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like~KEGG: dac:Daci_0190 alcohol dehydrogenase~SMART: Polyketide synthase, enoylreductase inference protein motif:PRIAM:1.6.5.5 db_xref InterPro:IPR013149 db_xref InterPro:IPR013154 db_xref InterPro:IPR020843 179115 180140 gene locus_tag Alide2_0161 179115 180140 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82599.1||gnl|jgi|Alide2_0161 note KEGG: xtr:100498142 UPF0065 protein in clcB-clcD intergenic region-like inference similar to AA sequence:KEGG:100498142 db_xref InterPro:IPR005064 db_xref InterPro:IPR006311 181079 180171 gene locus_tag Alide2_0162 181079 180171 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB82600.1||gnl|jgi|Alide2_0162 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: aav:Aave_3679 LysR family transcriptional regulator inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 181189 182172 gene locus_tag Alide2_0163 181189 182172 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82601.1||gnl|jgi|Alide2_0163 note KEGG: aav:Aave_3678 hypothetical protein inference similar to AA sequence:KEGG:Aave_3678 db_xref InterPro:IPR005064 db_xref InterPro:IPR006311 182169 183368 gene locus_tag Alide2_0164 182169 183368 CDS product amidohydrolase EC_number 3.5.1.32 transl_table 11 protein_id gb|AEB82602.1||gnl|jgi|Alide2_0164 note TIGRFAM: Peptidase M20D, amidohydrolase~KEGG: aav:Aave_3677 amidohydrolase~PFAM: Peptidase M20; Peptidase M20, dimerisation inference protein motif:TFAM:TIGR01891 db_xref GO:0016787 db_xref InterPro:IPR002933 db_xref InterPro:IPR010168 db_xref InterPro:IPR011650 183548 184528 gene locus_tag Alide2_0165 183548 184528 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82603.1||gnl|jgi|Alide2_0165 note KEGG: ajs:Ajs_0125 hypothetical protein inference similar to AA sequence:KEGG:Ajs_0125 db_xref InterPro:IPR005064 184530 186038 gene locus_tag Alide2_0166 184530 186038 CDS product o-succinylbenzoate--CoA ligase EC_number 6.2.1.26 transl_table 11 protein_id gb|AEB82604.1||gnl|jgi|Alide2_0166 note KEGG: dac:Daci_0186 AMP-dependent synthetase/ligase~PFAM: AMP-dependent synthetase/ligase inference protein motif:PRIAM:6.2.1.26 db_xref InterPro:IPR000873 186056 187039 gene locus_tag Alide2_0167 186056 187039 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82605.1||gnl|jgi|Alide2_0167 note KEGG: xtr:100497979 hypothetical protein LOC100497979 inference similar to AA sequence:KEGG:100497979 db_xref InterPro:IPR005064 188095 187094 gene locus_tag Alide2_0168 188095 187094 CDS product extra-cytoplasmic solute receptor transl_table 11 protein_id gb|AEB82606.1||gnl|jgi|Alide2_0168 note KEGG: reh:H16_B1474 extra-cytoplasmic solute receptor inference similar to AA sequence:KEGG:H16_B1474 db_xref InterPro:IPR005064 db_xref InterPro:IPR006311 189297 188116 gene locus_tag Alide2_0169 189297 188116 CDS product amidohydrolase EC_number 3.5.1.32 transl_table 11 protein_id gb|AEB82607.1||gnl|jgi|Alide2_0169 note PFAM: Peptidase M20; Peptidase M20, dimerisation~manually curated~KEGG: reu:Reut_B4300 peptidase M20D, amidohydrolase~TIGRFAM: Peptidase M20D, amidohydrolase inference protein motif:TFAM:TIGR01891 db_xref GO:0016787 db_xref InterPro:IPR002933 db_xref InterPro:IPR010168 db_xref InterPro:IPR011650 189562 189981 gene locus_tag Alide2_0170 189562 189981 CDS product protein of unknown function DUF35 transl_table 11 protein_id gb|AEB82608.1||gnl|jgi|Alide2_0170 note PFAM: Domain of unknown function DUF35, OB-fold, C-terminal; Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal~KEGG: ajs:Ajs_0128 hypothetical protein inference protein motif:PFAM:PF01796 db_xref InterPro:IPR002878 db_xref InterPro:IPR022002 189978 191186 gene locus_tag Alide2_0171 189978 191186 CDS product Thiolase domain-containing protein transl_table 11 protein_id gb|AEB82609.1||gnl|jgi|Alide2_0171 note PFAM: Thiolase, C-terminal~KEGG: ajs:Ajs_0129 thiolase inference protein motif:PFAM:PF02803 db_xref GO:0003700 db_xref InterPro:IPR020617 191206 192363 gene locus_tag Alide2_0172 191206 192363 CDS product Butyryl-CoA dehydrogenase EC_number 1.3.8.1 transl_table 11 protein_id gb|AEB82610.1||gnl|jgi|Alide2_0172 note KEGG: dia:Dtpsy_0148 acyl-CoA dehydrogenase domain protein~PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal inference protein motif:PRIAM:1.3.99.2 db_xref InterPro:IPR006090 db_xref InterPro:IPR006091 db_xref InterPro:IPR006092 192360 192791 gene locus_tag Alide2_0173 192360 192791 CDS product phenylacetic acid degradation-related protein transl_table 11 protein_id gb|AEB82611.1||gnl|jgi|Alide2_0173 note KEGG: dac:Daci_0175 thioesterase superfamily protein~TIGRFAM: Phenylacetic acid degradation-related protein~PFAM: Thioesterase superfamily inference protein motif:TFAM:TIGR00369 db_xref InterPro:IPR003736 db_xref InterPro:IPR006683 193537 192788 gene locus_tag Alide2_0174 193537 192788 CDS product transcriptional regulator, IclR family transl_table 11 protein_id gb|AEB82612.1||gnl|jgi|Alide2_0174 note KEGG: vei:Veis_2216 regulatory proteins, IclR~PFAM: Transcription regulator IclR, N-terminal~SMART: Transcription regulator IclR, N-terminal inference protein motif:PFAM:PF09339 db_xref GO:0003677 db_xref InterPro:IPR005471 193668 194654 gene locus_tag Alide2_0175 193668 194654 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82613.1||gnl|jgi|Alide2_0175 note KEGG: vei:Veis_2212 hypothetical protein inference similar to AA sequence:KEGG:Veis_2212 db_xref InterPro:IPR005064 db_xref InterPro:IPR006311 194651 195511 gene locus_tag Alide2_0176 194651 195511 CDS product Trans-2-enoyl-CoA reductase (NADPH) EC_number 1.3.1.38 transl_table 11 protein_id gb|AEB82614.1||gnl|jgi|Alide2_0176 note KEGG: vei:Veis_2211 short-chain dehydrogenase/reductase SDR~PFAM: Short-chain dehydrogenase/reductase SDR inference protein motif:PRIAM:1.3.1.38 db_xref InterPro:IPR002198 195511 196659 gene locus_tag Alide2_0177 195511 196659 CDS product Isovaleryl-CoA dehydrogenase EC_number 1.3.99.10 transl_table 11 protein_id gb|AEB82615.1||gnl|jgi|Alide2_0177 note KEGG: reu:Reut_B5206 acyl-CoA dehydrogenase, C-terminal:acyl-CoA dehydrogenase, central region:acyl-CoA dehydrogenase, N-terminal~PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal inference protein motif:PRIAM:1.3.99.10 db_xref InterPro:IPR006090 db_xref InterPro:IPR006091 db_xref InterPro:IPR006092 196709 198328 gene locus_tag Alide2_0178 196709 198328 CDS product Methylcrotonoyl-CoA carboxylase EC_number 6.4.1.4 transl_table 11 protein_id gb|AEB82616.1||gnl|jgi|Alide2_0178 note KEGG: axy:AXYL_05145 methylcrotonoyl-CoA carboxylase subunit beta~PFAM: Carboxyl transferase inference protein motif:PRIAM:6.4.1.4 db_xref InterPro:IPR000022 198339 199502 gene locus_tag Alide2_0179 198339 199502 CDS product Isovaleryl-CoA dehydrogenase EC_number 1.3.99.10 transl_table 11 protein_id gb|AEB82617.1||gnl|jgi|Alide2_0179 note KEGG: reu:Reut_B4462 acyl-CoA dehydrogenase, C-terminal:acyl-CoA dehydrogenase, central region:acyl-CoA dehydrogenase, N-terminal~PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain inference protein motif:PRIAM:1.3.99.10 db_xref InterPro:IPR006090 db_xref InterPro:IPR006091 db_xref InterPro:IPR006092 199504 200325 gene locus_tag Alide2_0180 199504 200325 CDS product Enoyl-CoA hydratase/isomerase transl_table 11 protein_id gb|AEB82618.1||gnl|jgi|Alide2_0180 note PFAM: Crotonase, core~KEGG: vei:Veis_2207 enoyl-CoA hydratase/isomerase inference protein motif:PFAM:PF00378 db_xref GO:0003824 db_xref InterPro:IPR001753 200339 202333 gene locus_tag Alide2_0181 200339 202333 CDS product Methylcrotonoyl-CoA carboxylase EC_number 6.4.1.4 transl_table 11 protein_id gb|AEB82619.1||gnl|jgi|Alide2_0181 note PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Carbamoyl-phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; Biotin/lipoyl attachment~KEGG: reu:Reut_B4460 carbamoyl-phosphate synthase subunit L~SMART: Biotin carboxylase, C-terminal inference protein motif:PRIAM:6.4.1.4 db_xref InterPro:IPR000089 db_xref InterPro:IPR005479 db_xref InterPro:IPR005481 db_xref InterPro:IPR005482 202330 204144 gene locus_tag Alide2_0182 202330 204144 CDS product protein of unknown function DUF1446 transl_table 11 protein_id gb|AEB82620.1||gnl|jgi|Alide2_0182 note PFAM: Protein of unknown function DUF1446~KEGG: reu:Reut_B4459 hypothetical protein inference protein motif:PFAM:PF07287 db_xref InterPro:IPR010839 204168 205148 gene locus_tag Alide2_0183 204168 205148 CDS product extra-cytoplasmic solute receptor family protein 140 transl_table 11 protein_id gb|AEB82621.1||gnl|jgi|Alide2_0183 note KEGG: axy:AXYL_05150 extra-cytoplasmic solute receptor family protein 140 inference similar to AA sequence:KEGG:AXYL_05150 db_xref InterPro:IPR005064 205156 206376 gene locus_tag Alide2_0184 205156 206376 CDS product Formyl-CoA transferase EC_number 2.8.3.16 transl_table 11 protein_id gb|AEB82622.1||gnl|jgi|Alide2_0184 note KEGG: vei:Veis_2206 L-carnitine dehydratase/bile acid-inducible protein F~PFAM: CoA-transferase family III inference protein motif:PRIAM:2.8.3.16 db_xref InterPro:IPR003673 207339 206422 gene locus_tag Alide2_0185 207339 206422 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB82623.1||gnl|jgi|Alide2_0185 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: dia:Dtpsy_0150 transcriptional regulator, LysR family inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 207449 208726 gene locus_tag Alide2_0186 207449 208726 CDS product Formyl-CoA transferase EC_number 2.8.3.16 transl_table 11 protein_id gb|AEB82624.1||gnl|jgi|Alide2_0186 note KEGG: dia:Dtpsy_0151 L-carnitine dehydratase/bile acid-inducible protein F~PFAM: CoA-transferase family III inference protein motif:PRIAM:2.8.3.16 db_xref InterPro:IPR003673 209677 208778 gene locus_tag Alide2_0187 209677 208778 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB82625.1||gnl|jgi|Alide2_0187 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: ctt:CtCNB1_0218 transcriptional regulator, LysR family inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 209815 210828 gene locus_tag Alide2_0188 209815 210828 CDS product twin-arginine translocation pathway signal transl_table 11 protein_id gb|AEB82626.1||gnl|jgi|Alide2_0188 note KEGG: ctt:CtCNB1_0219 twin-arginine translocation pathway signal inference similar to AA sequence:KEGG:CtCNB1_0219 db_xref InterPro:IPR005064 210960 212150 gene locus_tag Alide2_0189 210960 212150 CDS product Formyl-CoA transferase EC_number 2.8.3.16 transl_table 11 protein_id gb|AEB82627.1||gnl|jgi|Alide2_0189 note KEGG: ajs:Ajs_0117 L-carnitine dehydratase/bile acid-inducible protein F~PFAM: CoA-transferase family III inference protein motif:PRIAM:2.8.3.16 db_xref InterPro:IPR003673 213467 212175 gene locus_tag Alide2_0190 213467 212175 CDS product Glutamate dehydrogenase (NAD(P)(+)) EC_number 1.4.1.3 transl_table 11 protein_id gb|AEB82628.1||gnl|jgi|Alide2_0190 note PFAM: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain~KEGG: dia:Dtpsy_0153 Glu/Leu/Phe/Val dehydrogenase~SMART: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal inference protein motif:PRIAM:1.4.1.3 db_xref InterPro:IPR006096 db_xref InterPro:IPR006097 213654 214103 gene locus_tag Alide2_0191 213654 214103 CDS product transmembrane pair domain-containing protein transl_table 11 protein_id gb|AEB82629.1||gnl|jgi|Alide2_0191 note PFAM: Transmembrane pair, bacterial~KEGG: dia:Dtpsy_0156 transmembrane pair domain protein inference protein motif:PFAM:PF05232 db_xref InterPro:IPR007896 214150 215085 gene locus_tag Alide2_0192 214150 215085 CDS product SdiA-regulated domain protein transl_table 11 protein_id gb|AEB82630.1||gnl|jgi|Alide2_0192 note PFAM: SdiA-regulated~KEGG: psa:PST_0402 hypothetical protein inference protein motif:PFAM:PF06977 db_xref InterPro:IPR009722 215213 217948 gene locus_tag Alide2_0193 215213 217948 CDS product methionine synthase EC_number 2.1.1.13 transl_table 11 protein_id gb|AEB82631.1||gnl|jgi|Alide2_0193 note TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase~KEGG: dac:Daci_0232 methionine synthase~PFAM: Vitamin B12-dependent methionine synthase, activation domain; Methionine synthase, cobalamin (vitamin B12)-binding module, cap; Cobalamin (vitamin B12)-binding; Pterin-binding inference protein motif:TFAM:TIGR02082 db_xref GO:0008270 db_xref GO:0008705 db_xref GO:0031419 db_xref InterPro:IPR000489 db_xref InterPro:IPR003759 db_xref InterPro:IPR004223 db_xref InterPro:IPR006158 db_xref InterPro:IPR011822 218107 221196 gene locus_tag Alide2_0194 218107 221196 CDS product CRISPR-associated protein, Csn1 family transl_table 11 protein_id gb|AEB82632.1||gnl|jgi|Alide2_0194 note TIGRFAM: CRISPR-associated protein, SAG0894~KEGG: vei:Veis_1230 CRISPR-associated endonuclease Csn1 family protein inference protein motif:TFAM:TIGR01865 db_xref InterPro:IPR010145 221202 222131 gene locus_tag Alide2_0195 221202 222131 CDS product CRISPR-associated protein Cas1 transl_table 11 protein_id gb|AEB82633.1||gnl|jgi|Alide2_0195 note KEGG: vei:Veis_1231 CRISPR-associated Cas1 family protein~TIGRFAM: CRISPR-associated protein Cas1, NMENI subtype; CRISPR-associated protein Cas1~PFAM: CRISPR-associated protein Cas1 inference protein motif:TFAM:TIGR03639 db_xref InterPro:IPR002729 db_xref InterPro:IPR019855 222174 222389 gene locus_tag Alide2_0196 222174 222389 CDS product CRISPR-associated protein Cas2 transl_table 11 protein_id gb|AEB82634.1||gnl|jgi|Alide2_0196 note KEGG: vei:Veis_1232 CRISPR-associated Cas2 family protein~TIGRFAM: CRISPR associated protein Cas2~PFAM: Virulence-associated protein D / CRISPR associated protein Cas2 inference protein motif:TFAM:TIGR01573 db_xref InterPro:IPR019199 db_xref InterPro:IPR021127 222440 222700 gene locus_tag Alide2_0197 pseudo 224240 222726 gene locus_tag Alide2_0198 224240 222726 CDS product transposase IS66 transl_table 11 protein_id gb|AEB82635.1||gnl|jgi|Alide2_0198 note PFAM: Transposase, IS66~KEGG: dia:Dtpsy_2523 transposase IS66 inference protein motif:PFAM:PF03050 db_xref InterPro:IPR004291 224655 224323 gene locus_tag Alide2_0199 224655 224323 CDS product IS66 Orf2 family protein transl_table 11 protein_id gb|AEB82636.1||gnl|jgi|Alide2_0199 note PFAM: Transposase (putative), IS66 Orf2-like~KEGG: rfr:Rfer_2710 IS66 Orf2 like inference protein motif:PFAM:PF05717 db_xref InterPro:IPR008878 225080 224652 gene locus_tag Alide2_0200 225080 224652 CDS product transposase IS3/IS911 family protein transl_table 11 protein_id gb|AEB82637.1||gnl|jgi|Alide2_0200 note PFAM: Transposase IS3/IS911family~KEGG: rfr:Rfer_2709 transposase IS3/IS911 inference protein motif:PFAM:PF01527 db_xref GO:0003677 db_xref GO:0004803 db_xref InterPro:IPR002514 225118 226470 gene locus_tag Alide2_0201 pseudo 226463 227278 gene locus_tag Alide2_0202 226463 227278 CDS product IstB domain protein ATP-binding protein transl_table 11 protein_id gb|AEB82638.1||gnl|jgi|Alide2_0202 note KEGG: mpt:Mpe_A2996 putative transposase~PFAM: IstB-like ATP-binding protein~SMART: ATPase, AAA+ type, core inference protein motif:PFAM:PF01695 db_xref GO:0005524 db_xref InterPro:IPR002611 db_xref InterPro:IPR003593 227344 227502 gene locus_tag Alide2_0203 pseudo 227639 232423 repeat_region note CRISPRS rpt_unit_range 227639..227675 233364 232822 gene locus_tag Alide2_0204 233364 232822 CDS product Shikimate kinase EC_number 2.7.1.71 transl_table 11 protein_id gb|AEB82639.1||gnl|jgi|Alide2_0204 note KEGG: dia:Dtpsy_0168 shikimate kinase~PFAM: Shikimate kinase inference protein motif:PRIAM:2.7.1.71 db_xref InterPro:IPR000623 233470 234369 gene locus_tag Alide2_0205 233470 234369 CDS product ribonuclease BN transl_table 11 protein_id gb|AEB82640.1||gnl|jgi|Alide2_0205 note PFAM: Ribonuclease BN-related~KEGG: ajs:Ajs_0151 ribonuclease BN inference protein motif:PFAM:PF03631 db_xref GO:0004540 db_xref InterPro:IPR004664 234495 235211 gene locus_tag Alide2_0206 234495 235211 CDS product 17 kDa surface antigen transl_table 11 protein_id gb|AEB82641.1||gnl|jgi|Alide2_0206 note PFAM: Rickettsia 17kDa surface antigen~KEGG: ajs:Ajs_0152 17 kDa surface antigen inference protein motif:PFAM:PF05433 db_xref InterPro:IPR008816 236041 235268 gene locus_tag Alide2_0207 236041 235268 CDS product Ferredoxin--NADP(+) reductase EC_number 1.18.1.2 transl_table 11 protein_id gb|AEB82642.1||gnl|jgi|Alide2_0207 note KEGG: ajs:Ajs_0153 ferredoxin--NADP(+) reductase~PFAM: Oxidoreductase, FAD-binding domain; Oxidoreductase FAD/NAD(P)-binding inference protein motif:PRIAM:1.18.1.2 db_xref InterPro:IPR001433 db_xref InterPro:IPR008333 236234 237430 gene locus_tag Alide2_0208 236234 237430 CDS product Extracellular ligand-binding receptor transl_table 11 protein_id gb|AEB82643.1||gnl|jgi|Alide2_0208 note PFAM: Extracellular ligand-binding receptor~KEGG: dia:Dtpsy_0172 extracellular ligand-binding receptor inference protein motif:PFAM:PF01094 db_xref InterPro:IPR001828 237447 239345 gene locus_tag Alide2_0209 237447 239345 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB82644.1||gnl|jgi|Alide2_0209 note PFAM: ABC transporter permease~KEGG: ajs:Ajs_0155 inner-membrane translocator inference protein motif:PFAM:PF02653 db_xref GO:0005215 db_xref InterPro:IPR001851 239342 240880 gene locus_tag Alide2_0210 239342 240880 CDS product Monosaccharide-transporting ATPase EC_number 3.6.3.17 transl_table 11 protein_id gb|AEB82645.1||gnl|jgi|Alide2_0210 note PFAM: ABC transporter-like~KEGG: vei:Veis_0860 ABC transporter related~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.17 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 241028 243928 gene locus_tag Alide2_0211 241028 243928 CDS product peptidase C1A papain transl_table 11 protein_id gb|AEB82646.1||gnl|jgi|Alide2_0211 note KEGG: kpe:KPK_1160 peptidoglycan binding domain/papain family cysteine protease~PFAM: Peptidase C1A, papain C-terminal~SMART: Peptidase C1A, papain C-terminal inference protein motif:PFAM:PF00112 db_xref GO:0008234 db_xref InterPro:IPR000668 245114 244081 gene locus_tag Alide2_0212 pseudo 245550 245172 gene locus_tag Alide2_0213 pseudo 247160 245625 gene locus_tag Alide2_0214 247160 245625 CDS product Mg chelatase, subunit ChlI transl_table 11 protein_id gb|AEB82647.1||gnl|jgi|Alide2_0214 note TIGRFAM: Mg chelatase-related protein~PFAM: Magnesium chelatase, ChlI subunit~KEGG: dia:Dtpsy_0179 Mg chelatase, subunit ChlI~SMART: ATPase, AAA+ type, core inference protein motif:TFAM:TIGR00368 db_xref InterPro:IPR000523 db_xref InterPro:IPR003593 db_xref InterPro:IPR004482 247299 248030 gene locus_tag Alide2_0215 247299 248030 CDS product Conserved hypothetical protein CHP02001 transl_table 11 protein_id gb|AEB82648.1||gnl|jgi|Alide2_0215 note KEGG: dia:Dtpsy_0180 hypothetical protein~TIGRFAM: Conserved hypothetical protein CHP02001~PFAM: Conserved hypothetical protein CHP02001 inference protein motif:TFAM:TIGR02001 db_xref InterPro:IPR010239 248050 248388 gene locus_tag Alide2_0216 248050 248388 CDS product nitrogen regulatory protein P-II transl_table 11 protein_id gb|AEB82649.1||gnl|jgi|Alide2_0216 note KEGG: aav:Aave_0233 nitrogen regulatory protein P-II~PFAM: Nitrogen regulatory protein PII~SMART: Nitrogen regulatory protein PII inference protein motif:PFAM:PF00543 db_xref GO:0030234 db_xref InterPro:IPR002187 248411 249799 gene locus_tag Alide2_0217 248411 249799 CDS product ammonium transporter transl_table 11 protein_id gb|AEB82650.1||gnl|jgi|Alide2_0217 note KEGG: ajs:Ajs_0164 ammonium transporter~TIGRFAM: Ammonium transporter~PFAM: Ammonium transporter inference protein motif:TFAM:TIGR00836 db_xref GO:0008519 db_xref InterPro:IPR001905 250530 250853 gene locus_tag Alide2_0218 250530 250853 CDS product transposase IS3/IS911 family protein transl_table 11 protein_id gb|AEB82651.1||gnl|jgi|Alide2_0218 note PFAM: Transposase IS3/IS911family~KEGG: ajs:Ajs_0906 transposase IS3/IS911 family protein inference protein motif:PFAM:PF01527 db_xref GO:0003677 db_xref GO:0004803 db_xref InterPro:IPR002514 250850 251765 gene locus_tag Alide2_0219 pseudo 251794 252933 gene locus_tag Alide2_0220 pseudo 252923 253726 gene locus_tag Alide2_0221 252923 253726 CDS product IstB domain protein ATP-binding protein transl_table 11 protein_id gb|AEB82652.1||gnl|jgi|Alide2_0221 note KEGG: axy:AXYL_06594 IstB-like ATP binding family protein 3~PFAM: IstB-like ATP-binding protein~SMART: ATPase, AAA+ type, core inference protein motif:PFAM:PF01695 db_xref GO:0005524 db_xref InterPro:IPR002611 db_xref InterPro:IPR003593 253902 253777 gene locus_tag Alide2_0222 253902 253777 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82653.1||gnl|jgi|Alide2_0222 inference ab initio prediction:Prodigal:1.4 254954 254064 gene locus_tag Alide2_0223 254954 254064 CDS product 3-hydroxyisobutyrate dehydrogenase EC_number 1.1.1.31 transl_table 11 protein_id gb|AEB82654.1||gnl|jgi|Alide2_0223 note KEGG: esa:ESA_04058 hypothetical protein~PFAM: 6-phosphogluconate dehydrogenase, NAD-binding inference protein motif:PRIAM:1.1.1.31 db_xref InterPro:IPR006115 255811 254951 gene locus_tag Alide2_0224 255811 254951 CDS product alpha/beta hydrolase fold protein transl_table 11 protein_id gb|AEB82655.1||gnl|jgi|Alide2_0224 note PFAM: Alpha/beta hydrolase fold-1~KEGG: axy:AXYL_03189 alpha/beta hydrolase fold family protein 10 inference protein motif:PFAM:PF00561 db_xref InterPro:IPR000073 256151 255801 gene locus_tag Alide2_0225 256151 255801 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82656.1||gnl|jgi|Alide2_0225 note KEGG: axy:AXYL_03188 hypothetical protein inference similar to AA sequence:KEGG:AXYL_03188 257301 256234 gene locus_tag Alide2_0226 257301 256234 CDS product membrane protein AbrB duplication transl_table 11 protein_id gb|AEB82657.1||gnl|jgi|Alide2_0226 note KEGG: vap:Vapar_4786 membrane protein AbrB duplication~TIGRFAM: AbrB duplication, membrane protein~PFAM: Putative ammonia monooxygenase inference protein motif:TFAM:TIGR03082 db_xref InterPro:IPR007820 db_xref InterPro:IPR017516 258650 257304 gene locus_tag Alide2_0227 pseudo 258805 259959 gene locus_tag Alide2_0228 258805 259959 CDS product Butyryl-CoA dehydrogenase EC_number 1.3.8.1 transl_table 11 protein_id gb|AEB82658.1||gnl|jgi|Alide2_0228 note KEGG: rme:Rmet_5425 putative butyryl-CoA dehydrogenase~PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal inference protein motif:PRIAM:1.3.99.2 db_xref InterPro:IPR006090 db_xref InterPro:IPR006091 db_xref InterPro:IPR006092 259983 260957 gene locus_tag Alide2_0229 259983 260957 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82659.1||gnl|jgi|Alide2_0229 note KEGG: vei:Veis_3320 hypothetical protein inference similar to AA sequence:KEGG:Veis_3320 db_xref InterPro:IPR005064 260954 263029 gene locus_tag Alide2_0230 260954 263029 CDS product CoA-binding domain protein transl_table 11 protein_id gb|AEB82660.1||gnl|jgi|Alide2_0230 note KEGG: dac:Daci_1885 CoA-binding domain-containing protein~PFAM: CoA-binding~SMART: CoA-binding inference protein motif:PFAM:PF02629 db_xref InterPro:IPR003781 263103 264215 gene locus_tag Alide2_0231 263103 264215 CDS product FAD linked oxidase domain protein transl_table 11 protein_id gb|AEB82661.1||gnl|jgi|Alide2_0231 note PFAM: FAD linked oxidase, N-terminal; FAD-linked oxidase, C-terminal~KEGG: dia:Dtpsy_0184 FAD linked oxidase domain protein inference protein motif:PFAM:PF01565 db_xref GO:0003824 db_xref GO:0016491 db_xref GO:0050660 db_xref InterPro:IPR004113 db_xref InterPro:IPR006094 264218 264991 gene locus_tag Alide2_0232 264218 264991 CDS product protein of unknown function DUF1275 transl_table 11 protein_id gb|AEB82662.1||gnl|jgi|Alide2_0232 note PFAM: Protein of unknown function DUF1275~KEGG: dia:Dtpsy_0185 protein of unknown function DUF1275 inference protein motif:PFAM:PF06912 db_xref InterPro:IPR010699 265028 266266 gene locus_tag Alide2_0233 265028 266266 CDS product protein of unknown function DUF224 cysteine-rich region domain protein transl_table 11 protein_id gb|AEB82663.1||gnl|jgi|Alide2_0233 note PFAM: Cysteine-rich domain; 4Fe-4S binding domain~KEGG: ajs:Ajs_0168 glycolate oxidase iron-sulfur subunit inference protein motif:PFAM:PF02754 db_xref GO:0009055 db_xref GO:0051536 db_xref InterPro:IPR001450 db_xref InterPro:IPR004017 266329 267171 gene locus_tag Alide2_0234 266329 267171 CDS product Fertility inhibition FinO-like protein transl_table 11 protein_id gb|AEB82664.1||gnl|jgi|Alide2_0234 note KEGG: dia:Dtpsy_0187 ProQ activator of osmoprotectant transporter ProP~PFAM: Fertility inhibition FinO/ProQ~SMART: Fertility inhibition FinO/ProQ inference protein motif:PFAM:PF04352 db_xref InterPro:IPR016103 268113 267229 gene locus_tag Alide2_0235 268113 267229 CDS product protein of unknown function DUF6 transmembrane transl_table 11 protein_id gb|AEB82665.1||gnl|jgi|Alide2_0235 note PFAM: Drug/metabolite transporter~KEGG: ajs:Ajs_0174 hypothetical protein inference protein motif:PFAM:PF00892 db_xref InterPro:IPR000620 269444 268167 gene locus_tag Alide2_0236 269444 268167 CDS product major facilitator superfamily MFS_1 transl_table 11 protein_id gb|AEB82666.1||gnl|jgi|Alide2_0236 note PFAM: Major facilitator superfamily MFS-1~KEGG: dia:Dtpsy_0193 lysophospholipid transporter LplT inference protein motif:PFAM:PF07690 db_xref InterPro:IPR011701 269588 270682 gene locus_tag Alide2_0237 269588 270682 CDS product Alanine racemase EC_number 5.1.1.1 transl_table 11 protein_id gb|AEB82667.1||gnl|jgi|Alide2_0237 note PFAM: Alanine racemase, N-terminal; Alanine racemase, C-terminal~TIGRFAM: Alanine racemase~HAMAP: Alanine racemase~KEGG: ajs:Ajs_0176 alanine racemase inference protein motif:HAMAP:MF_01201 db_xref InterPro:IPR000821 db_xref InterPro:IPR001608 db_xref InterPro:IPR011079 270901 271920 gene locus_tag Alide2_0238 270901 271920 CDS product Cytochrome-c peroxidase EC_number 1.11.1.5 transl_table 11 protein_id gb|AEB82668.1||gnl|jgi|Alide2_0238 note KEGG: dia:Dtpsy_0196 cytochrome-c peroxidase~PFAM: Di-haem cytochrome c peroxidase; Cytochrome c, class I inference protein motif:PRIAM:1.11.1.5 db_xref InterPro:IPR003088 db_xref InterPro:IPR004852 272614 272000 gene locus_tag Alide2_0239 272614 272000 CDS product Glutathione S-transferase domain protein transl_table 11 protein_id gb|AEB82669.1||gnl|jgi|Alide2_0239 note PFAM: Glutathione S-transferase, N-terminal; Glutathione S-transferase, C-terminal~KEGG: dia:Dtpsy_0197 glutathione S-transferase domain protein inference protein motif:PFAM:PF02798 db_xref InterPro:IPR004045 db_xref InterPro:IPR004046 272745 274127 gene locus_tag Alide2_0240 272745 274127 CDS product DNA repair protein RadA transl_table 11 protein_id gb|AEB82670.1||gnl|jgi|Alide2_0240 note TIGRFAM: DNA repair protein RadA~PFAM: Circadian clock protein KaiC/DNA repair protein RadA~KEGG: dia:Dtpsy_0199 DNA repair protein RadA~SMART: ATPase, AAA+ type, core inference protein motif:TFAM:TIGR00416 db_xref GO:0003684 db_xref GO:0005524 db_xref InterPro:IPR003593 db_xref InterPro:IPR004504 db_xref InterPro:IPR014774 275117 274131 gene locus_tag Alide2_0241 275117 274131 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82671.1||gnl|jgi|Alide2_0241 note KEGG: rme:Rmet_1769 hypothetical protein inference similar to AA sequence:KEGG:Rmet_1769 db_xref InterPro:IPR005064 276566 275142 gene locus_tag Alide2_0242 276566 275142 CDS product Amidase transl_table 11 protein_id gb|AEB82672.1||gnl|jgi|Alide2_0242 note PFAM: Amidase~KEGG: reh:H16_A1882 Asp-tRNA Asn / Glu-tRNA Gln amidotransferase A subunit or related amidase inference protein motif:PFAM:PF01425 db_xref GO:0005524 db_xref InterPro:IPR000120 276732 277148 gene locus_tag Alide2_0243 276732 277148 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82673.1||gnl|jgi|Alide2_0243 note KEGG: ajs:Ajs_0181 hypothetical protein inference similar to AA sequence:KEGG:Ajs_0181 277193 278131 gene locus_tag Alide2_0244 277193 278131 CDS product branched-chain amino acid aminotransferase EC_number 2.6.1.42 transl_table 11 protein_id gb|AEB82674.1||gnl|jgi|Alide2_0244 note TIGRFAM: Branched-chain amino acid aminotransferase I~KEGG: ajs:Ajs_0182 branched-chain amino acid aminotransferase~PFAM: Aminotransferase, class IV inference protein motif:TFAM:TIGR01122 db_xref GO:0004084 db_xref InterPro:IPR001544 db_xref InterPro:IPR005785 278139 278345 gene locus_tag Alide2_0245 278139 278345 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82675.1||gnl|jgi|Alide2_0245 note KEGG: ajs:Ajs_0183 hypothetical protein inference similar to AA sequence:KEGG:Ajs_0183 db_xref InterPro:IPR019401 278420 279772 gene locus_tag Alide2_0246 278420 279772 CDS product O-antigen polymerase transl_table 11 protein_id gb|AEB82676.1||gnl|jgi|Alide2_0246 note PFAM: O-antigen ligase-related~KEGG: ajs:Ajs_0184 O-antigen polymerase inference protein motif:PFAM:PF04932 db_xref InterPro:IPR007016 279765 280880 gene locus_tag Alide2_0247 279765 280880 CDS product glycosyl transferase group 1 transl_table 11 protein_id gb|AEB82677.1||gnl|jgi|Alide2_0247 note PFAM: Glycosyl transferase, group 1~KEGG: ajs:Ajs_0185 glycosyl transferase, group 1 inference protein motif:PFAM:PF00534 db_xref InterPro:IPR001296 280877 281923 gene locus_tag Alide2_0248 280877 281923 CDS product glycosyl transferase family 2 transl_table 11 protein_id gb|AEB82678.1||gnl|jgi|Alide2_0248 note PFAM: Glycosyl transferase, family 2~KEGG: ajs:Ajs_0186 glycosyl transferase family protein inference protein motif:PFAM:PF00535 db_xref InterPro:IPR001173 281920 282894 gene locus_tag Alide2_0249 281920 282894 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82679.1||gnl|jgi|Alide2_0249 note KEGG: ajs:Ajs_0187 hypothetical protein inference similar to AA sequence:KEGG:Ajs_0187 284027 282963 gene locus_tag Alide2_0250 284027 282963 CDS product 2-nitropropane dioxygenase NPD transl_table 11 protein_id gb|AEB82680.1||gnl|jgi|Alide2_0250 note PFAM: 2-nitropropane dioxygenase, NPD~KEGG: ajs:Ajs_0188 2-nitropropane dioxygenase, NPD inference protein motif:PFAM:PF03060 db_xref GO:0018580 db_xref InterPro:IPR004136 284890 284024 gene locus_tag Alide2_0251 284890 284024 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB82681.1||gnl|jgi|Alide2_0251 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: ajs:Ajs_0189 LysR family transcriptional regulator inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 284946 286175 gene locus_tag Alide2_0252 284946 286175 CDS product protein of unknown function DUF1228 transl_table 11 protein_id gb|AEB82682.1||gnl|jgi|Alide2_0252 note PFAM: Domain of unknown function DUF1228~KEGG: dia:Dtpsy_0209 protein of unknown function DUF1228 inference protein motif:PFAM:PF06779 db_xref InterPro:IPR010645 286898 286179 gene locus_tag Alide2_0253 286898 286179 CDS product MOSC domain containing protein transl_table 11 protein_id gb|AEB82683.1||gnl|jgi|Alide2_0253 note PFAM: Molybdenum cofactor sulfurase, C-terminal~KEGG: dia:Dtpsy_0210 MOSC domain containing protein inference protein motif:PFAM:PF03473 db_xref GO:0003824 db_xref GO:0030151 db_xref GO:0030170 db_xref InterPro:IPR005302 287455 286895 gene locus_tag Alide2_0254 287455 286895 CDS product alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen transl_table 11 protein_id gb|AEB82684.1||gnl|jgi|Alide2_0254 note PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant~KEGG: dia:Dtpsy_0211 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen inference protein motif:PFAM:PF00578 db_xref GO:0016209 db_xref GO:0016491 db_xref InterPro:IPR000866 287968 287474 gene locus_tag Alide2_0255 287968 287474 CDS product Activator of Hsp90 ATPase 1 family protein transl_table 11 protein_id gb|AEB82685.1||gnl|jgi|Alide2_0255 note PFAM: Activator of Hsp90 ATPase homologue 1-like~KEGG: oca:OCAR_5014 activator of HSP90 ATPase 1 family protein inference protein motif:PFAM:PF08327 db_xref InterPro:IPR013538 288529 288068 gene locus_tag Alide2_0256 288529 288068 CDS product MaoC domain protein dehydratase transl_table 11 protein_id gb|AEB82686.1||gnl|jgi|Alide2_0256 note PFAM: MaoC-like dehydratase~KEGG: dac:Daci_0013 dehydratase inference protein motif:PFAM:PF01575 db_xref GO:0016491 db_xref InterPro:IPR002539 289522 288551 gene locus_tag Alide2_0257 289522 288551 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82687.1||gnl|jgi|Alide2_0257 note KEGG: dac:Daci_0012 hypothetical protein inference similar to AA sequence:KEGG:Daci_0012 db_xref InterPro:IPR005064 289676 290605 gene locus_tag Alide2_0258 289676 290605 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB82688.1||gnl|jgi|Alide2_0258 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: dac:Daci_0011 LysR family transcriptional regulator inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 290730 291896 gene locus_tag Alide2_0259 290730 291896 CDS product Formyl-CoA transferase EC_number 2.8.3.16 transl_table 11 protein_id gb|AEB82689.1||gnl|jgi|Alide2_0259 note KEGG: axy:AXYL_02637 CoA-transferase family III family protein 17~PFAM: CoA-transferase family III inference protein motif:PRIAM:2.8.3.16 db_xref InterPro:IPR003673 293125 291914 gene locus_tag Alide2_0260 293125 291914 CDS product integral membrane sensor signal transduction histidine kinase transl_table 11 protein_id gb|AEB82690.1||gnl|jgi|Alide2_0260 note KEGG: dia:Dtpsy_0212 histidine kinase~PFAM: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain~SMART: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain inference protein motif:PFAM:PF02518 db_xref GO:0000155 db_xref GO:0004871 db_xref GO:0005524 db_xref InterPro:IPR003594 db_xref InterPro:IPR003660 db_xref InterPro:IPR003661 293845 293135 gene locus_tag Alide2_0261 293845 293135 CDS product two component transcriptional regulator, winged helix family transl_table 11 protein_id gb|AEB82691.1||gnl|jgi|Alide2_0261 note KEGG: ajs:Ajs_0194 two component transcriptional regulator~PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal~SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal inference protein motif:PFAM:PF00072 db_xref GO:0000156 db_xref GO:0003677 db_xref InterPro:IPR001789 db_xref InterPro:IPR001867 295299 293941 gene locus_tag Alide2_0262 295299 293941 CDS product major facilitator superfamily MFS_1 transl_table 11 protein_id gb|AEB82692.1||gnl|jgi|Alide2_0262 note PFAM: Major facilitator superfamily MFS-1~KEGG: dia:Dtpsy_0214 major facilitator superfamily MFS_1 inference protein motif:PFAM:PF07690 db_xref InterPro:IPR011701 295309 295974 gene locus_tag Alide2_0263 295309 295974 CDS product Cupin 2 conserved barrel domain protein transl_table 11 protein_id gb|AEB82693.1||gnl|jgi|Alide2_0263 note KEGG: dia:Dtpsy_0215 transcriptional regulator, AraC family~PFAM: Cupin 2, conserved barrel~SMART: Helix-turn-helix, AraC type, DNA binding domain inference protein motif:PFAM:PF07883 db_xref InterPro:IPR013096 db_xref InterPro:IPR018060 296088 296981 gene locus_tag Alide2_0264 296088 296981 CDS product protein of unknown function DUF6 transmembrane transl_table 11 protein_id gb|AEB82694.1||gnl|jgi|Alide2_0264 note PFAM: Drug/metabolite transporter~KEGG: ajs:Ajs_0201 hypothetical protein inference protein motif:PFAM:PF00892 db_xref InterPro:IPR000620 296978 297832 gene locus_tag Alide2_0265 296978 297832 CDS product peptidase M48 Ste24p transl_table 11 protein_id gb|AEB82695.1||gnl|jgi|Alide2_0265 note PFAM: Peptidase M48~KEGG: ajs:Ajs_0203 peptidase M48, Ste24p inference protein motif:PFAM:PF01435 db_xref GO:0004222 db_xref InterPro:IPR001915 298105 297875 gene locus_tag Alide2_0266 pseudo 298107 298319 gene locus_tag Alide2_0267 pseudo 299144 298389 gene locus_tag Alide2_0268 299144 298389 CDS product transcriptional regulator, GntR family transl_table 11 protein_id gb|AEB82696.1||gnl|jgi|Alide2_0268 note KEGG: ajs:Ajs_0204 GntR family transcriptional regulator~PFAM: HTH transcriptional regulator, GntR; GntR, C-terminal~SMART: HTH transcriptional regulator, GntR; GntR, C-terminal inference protein motif:PFAM:PF00392 db_xref GO:0003700 db_xref InterPro:IPR000524 db_xref InterPro:IPR011711 300852 299146 gene locus_tag Alide2_0269 300852 299146 CDS product sigma54 specific transcriptional regulator, Fis family transl_table 11 protein_id gb|AEB82697.1||gnl|jgi|Alide2_0269 note KEGG: lch:Lcho_3364 putative sigma54 specific transcriptional regulator~PFAM: RNA polymerase sigma factor 54, interaction; Activator of aromatic catabolism; Helix-turn-helix, Fis-type; 4-vinyl reductase, 4VR~SMART: ATPase, AAA+ type, core inference protein motif:PFAM:PF00158 db_xref GO:0003700 db_xref GO:0005524 db_xref GO:0008134 db_xref InterPro:IPR002078 db_xref InterPro:IPR002197 db_xref InterPro:IPR003593 db_xref InterPro:IPR004096 db_xref InterPro:IPR010523 301084 301395 gene locus_tag Alide2_0270 301084 301395 CDS product Phenol hydroxylase subunit transl_table 11 protein_id gb|AEB82698.1||gnl|jgi|Alide2_0270 note PFAM: Phenol hydroxylase subunit~KEGG: avn:Avin_30760 multi-component phenol hydoxylase, assembly subunit; LapK inference protein motif:PFAM:PF06099 db_xref InterPro:IPR010353 301439 302431 gene locus_tag Alide2_0271 301439 302431 CDS product Phenol 2-monooxygenase EC_number 1.14.13.7 transl_table 11 protein_id gb|AEB82699.1||gnl|jgi|Alide2_0271 note KEGG: azo:azo2443 phenol hydroxylase subunit P1~PFAM: Methane/phenol/toluene hydroxylase inference protein motif:PRIAM:1.14.13.7 db_xref InterPro:IPR003430 302454 302723 gene locus_tag Alide2_0272 302454 302723 CDS product monooxygenase component MmoB/DmpM transl_table 11 protein_id gb|AEB82700.1||gnl|jgi|Alide2_0272 note PFAM: Monooxygenase component MmoB/DmpM~KEGG: azo:azo2442 phenol hydrolase subunit P2 inference protein motif:PFAM:PF02406 db_xref GO:0004497 db_xref InterPro:IPR003454 302749 304296 gene locus_tag Alide2_0273 302749 304296 CDS product Phenol 2-monooxygenase EC_number 1.14.13.7 transl_table 11 protein_id gb|AEB82701.1||gnl|jgi|Alide2_0273 note KEGG: azo:azo2441 phenol hydroxylase subunit P3~PFAM: Methane/phenol/toluene hydroxylase; YHS inference protein motif:PRIAM:1.14.13.7 db_xref InterPro:IPR003430 db_xref InterPro:IPR007029 304363 304719 gene locus_tag Alide2_0274 304363 304719 CDS product Phenol hydroxylase conserved region transl_table 11 protein_id gb|AEB82702.1||gnl|jgi|Alide2_0274 note PFAM: Phenol hydroxylase,conserved region~KEGG: rpf:Rpic12D_3551 phenol hydroxylase conserved region inference protein motif:PFAM:PF04663 db_xref InterPro:IPR006756 304790 305860 gene locus_tag Alide2_0275 304790 305860 CDS product Phenol 2-monooxygenase EC_number 1.14.13.7 transl_table 11 protein_id gb|AEB82703.1||gnl|jgi|Alide2_0275 note KEGG: azo:azo1850 phenol 2-monooxygenase~PFAM: Oxidoreductase, FAD-binding domain; Oxidoreductase FAD/NAD(P)-binding; Ferredoxin inference protein motif:PRIAM:1.14.13.7 db_xref InterPro:IPR001041 db_xref InterPro:IPR001433 db_xref InterPro:IPR008333 305874 306215 gene locus_tag Alide2_0276 305874 306215 CDS product ferredoxin transl_table 11 protein_id gb|AEB82704.1||gnl|jgi|Alide2_0276 note PFAM: Ferredoxin~KEGG: ajs:Ajs_0217 ferredoxin inference protein motif:PFAM:PF00111 db_xref GO:0009055 db_xref GO:0051536 db_xref InterPro:IPR001041 306238 307164 gene locus_tag Alide2_0277 306238 307164 CDS product catechol 2,3 dioxygenase EC_number 1.13.11.2 transl_table 11 protein_id gb|AEB82705.1||gnl|jgi|Alide2_0277 note TIGRFAM: Catechol 2,3 dioxygenase~KEGG: ajs:Ajs_0218 catechol 2,3-dioxygenase~PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase inference protein motif:TFAM:TIGR03211 db_xref GO:0008198 db_xref GO:0018577 db_xref InterPro:IPR004360 db_xref InterPro:IPR017624 307164 307595 gene locus_tag Alide2_0278 307164 307595 CDS product protein of unknown function DUF336 transl_table 11 protein_id gb|AEB82706.1||gnl|jgi|Alide2_0278 note PFAM: Domain of unknown function DUF336~KEGG: ajs:Ajs_0219 hypothetical protein inference protein motif:PFAM:PF03928 db_xref InterPro:IPR005624 307608 308504 gene locus_tag Alide2_0279 307608 308504 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82707.1||gnl|jgi|Alide2_0279 note KEGG: ctt:CtCNB1_3154 ZorfX inference similar to AA sequence:KEGG:CtCNB1_3154 309275 310735 gene locus_tag Alide2_0280 309275 310735 CDS product 2-hydroxymuconic semialdehyde dehydrogenase EC_number 1.2.1.8 transl_table 11 protein_id gb|AEB82708.1||gnl|jgi|Alide2_0280 note TIGRFAM: 2-hydroxymuconic semialdehyde dehydrogenase~KEGG: ajs:Ajs_0220 betaine-aldehyde dehydrogenase~PFAM: Aldehyde dehydrogenase domain inference protein motif:TFAM:TIGR03216 db_xref GO:0008784 db_xref InterPro:IPR015590 db_xref InterPro:IPR017628 310797 311660 gene locus_tag Alide2_0281 310797 311660 CDS product 2,6-dioxo-6-phenylhexa-3-enoate hydrolase EC_number 3.7.1.8 transl_table 11 protein_id gb|AEB82709.1||gnl|jgi|Alide2_0281 note KEGG: ctt:CtCNB1_3150 alpha/beta hydrolase fold protein~PFAM: Alpha/beta hydrolase fold-1 inference protein motif:PRIAM:3.7.1.8 db_xref InterPro:IPR000073 311665 312447 gene locus_tag Alide2_0282 311665 312447 CDS product 2-oxopent-4-enoate hydratase EC_number 4.2.1.80 transl_table 11 protein_id gb|AEB82710.1||gnl|jgi|Alide2_0282 note TIGRFAM: 2-oxopent-4-enoate hydratase~KEGG: ajs:Ajs_0222 4-oxalocrotonate decarboxylase~PFAM: Fumarylacetoacetase, C-terminal-like inference protein motif:TFAM:TIGR03220 db_xref InterPro:IPR002529 db_xref InterPro:IPR017632 312466 313380 gene locus_tag Alide2_0283 312466 313380 CDS product acetaldehyde dehydrogenase (acetylating) EC_number 1.2.1.10 transl_table 11 protein_id gb|AEB82711.1||gnl|jgi|Alide2_0283 note SMART: Semialdehyde dehydrogenase, NAD-binding~TIGRFAM: Acetaldehyde dehydrogenase~KEGG: ajs:Ajs_0223 acetaldehyde dehydrogenase~PFAM: Acetaldehyde dehydrogenase, C-terminal; Semialdehyde dehydrogenase, NAD-binding inference protein motif:TFAM:TIGR03215 db_xref GO:0008774 db_xref InterPro:IPR000534 db_xref InterPro:IPR003361 db_xref InterPro:IPR015426 313395 314432 gene locus_tag Alide2_0284 313395 314432 CDS product 4-hydroxy-2-oxovalerate aldolase EC_number 4.1.3.39 transl_table 11 protein_id gb|AEB82712.1||gnl|jgi|Alide2_0284 note TIGRFAM: 4-hydroxy-2-oxovalerate aldolase~KEGG: ajs:Ajs_0224 4-hydroxy-2-ketovalerate aldolase~PFAM: Pyruvate carboxyltransferase; DmpG-like communication inference protein motif:TFAM:TIGR03217 db_xref GO:0008701 db_xref InterPro:IPR000891 db_xref InterPro:IPR012425 db_xref InterPro:IPR017629 314466 315254 gene locus_tag Alide2_0285 314466 315254 CDS product 4-oxalocrotonate decarboxylase EC_number 4.1.1.77 transl_table 11 protein_id gb|AEB82713.1||gnl|jgi|Alide2_0285 note TIGRFAM: 4-oxalocrotonate decarboxylase~KEGG: ajs:Ajs_0225 4-oxalocrotonate decarboxylase~PFAM: Fumarylacetoacetase, C-terminal-like inference protein motif:TFAM:TIGR03218 db_xref InterPro:IPR002529 db_xref InterPro:IPR017630 315295 316263 gene locus_tag Alide2_0286 315295 316263 CDS product twin-arginine translocation pathway signal transl_table 11 protein_id gb|AEB82714.1||gnl|jgi|Alide2_0286 note KEGG: ctt:CtCNB1_3145 twin-arginine translocation pathway signal inference similar to AA sequence:KEGG:CtCNB1_3145 db_xref InterPro:IPR005064 db_xref InterPro:IPR006311 316290 316481 gene locus_tag Alide2_0287 316290 316481 CDS product 4-oxalocrotonate tautomerase family enzyme transl_table 11 protein_id gb|AEB82715.1||gnl|jgi|Alide2_0287 note KEGG: ajs:Ajs_0227 4-oxalocrotonate tautomerase~TIGRFAM: 4-oxalocrotonate tautomerase, bacteria/archaea~PFAM: 4-oxalocrotonate tautomerase inference protein motif:TFAM:TIGR00013 db_xref GO:0016853 db_xref InterPro:IPR004370 db_xref InterPro:IPR018191 317184 316546 gene locus_tag Alide2_0288 317184 316546 CDS product beta-lactamase domain protein transl_table 11 protein_id gb|AEB82716.1||gnl|jgi|Alide2_0288 note KEGG: ajs:Ajs_0228 beta-lactamase domain-containing protein~PFAM: Beta-lactamase-like~SMART: Beta-lactamase-like inference protein motif:PFAM:PF00753 db_xref GO:0016787 db_xref InterPro:IPR001279 318002 317250 gene locus_tag Alide2_0289 318002 317250 CDS product transcriptional regulator, IclR family transl_table 11 protein_id gb|AEB82717.1||gnl|jgi|Alide2_0289 note KEGG: dac:Daci_4281 IclR family transcriptional regulator~PFAM: Transcription regulator IclR, N-terminal; Transcription regulator IclR, C-terminal~SMART: Transcription regulator IclR, N-terminal inference protein motif:PFAM:PF09339 db_xref GO:0003677 db_xref InterPro:IPR005471 db_xref InterPro:IPR014757 318127 319107 gene locus_tag Alide2_0290 318127 319107 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82718.1||gnl|jgi|Alide2_0290 note KEGG: dac:Daci_4280 hypothetical protein inference similar to AA sequence:KEGG:Daci_4280 db_xref InterPro:IPR005064 319115 319987 gene locus_tag Alide2_0291 319115 319987 CDS product amidohydrolase 2 transl_table 11 protein_id gb|AEB82719.1||gnl|jgi|Alide2_0291 note PFAM: Amidohydrolase 2~KEGG: dac:Daci_4279 amidohydrolase 2 inference protein motif:PFAM:PF04909 db_xref GO:0003824 db_xref InterPro:IPR006992 320010 320999 gene locus_tag Alide2_0292 320010 320999 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82720.1||gnl|jgi|Alide2_0292 note KEGG: dac:Daci_4278 hypothetical protein inference similar to AA sequence:KEGG:Daci_4278 db_xref InterPro:IPR005064 321032 321718 gene locus_tag Alide2_0293 321032 321718 CDS product Dimethylmenaquinone methyltransferase transl_table 11 protein_id gb|AEB82721.1||gnl|jgi|Alide2_0293 note PFAM: Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase~KEGG: dac:Daci_4277 dimethylmenaquinone methyltransferase inference protein motif:PFAM:PF03737 db_xref InterPro:IPR005493 321715 322632 gene locus_tag Alide2_0294 321715 322632 CDS product Phosphoglycerate dehydrogenase EC_number 1.1.1.95 transl_table 11 protein_id gb|AEB82722.1||gnl|jgi|Alide2_0294 note KEGG: vap:Vapar_5586 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding~PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain inference protein motif:PRIAM:1.1.1.95 db_xref InterPro:IPR006139 db_xref InterPro:IPR006140 322657 323646 gene locus_tag Alide2_0295 322657 323646 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82723.1||gnl|jgi|Alide2_0295 note KEGG: vap:Vapar_3894 hypothetical protein inference similar to AA sequence:KEGG:Vapar_3894 db_xref InterPro:IPR005064 323993 324949 gene locus_tag Alide2_0296 323993 324949 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82724.1||gnl|jgi|Alide2_0296 note KEGG: dac:Daci_4274 hypothetical protein inference similar to AA sequence:KEGG:Daci_4274 db_xref InterPro:IPR005064 324955 325830 gene locus_tag Alide2_0297 324955 325830 CDS product amidohydrolase 2 transl_table 11 protein_id gb|AEB82725.1||gnl|jgi|Alide2_0297 note PFAM: Amidohydrolase 2~KEGG: dac:Daci_4273 amidohydrolase 2 inference protein motif:PFAM:PF04909 db_xref GO:0003824 db_xref InterPro:IPR006992 325843 326760 gene locus_tag Alide2_0298 325843 326760 CDS product SMP-30/Gluconolaconase/LRE-like region-containing protein transl_table 11 protein_id gb|AEB82726.1||gnl|jgi|Alide2_0298 note PFAM: SMP-30/Gluconolaconase/LRE-like region~KEGG: dac:Daci_4272 SMP-30/gluconolaconase/LRE domain-containing protein inference protein motif:PFAM:PF08450 db_xref InterPro:IPR013658 327755 326772 gene locus_tag Alide2_0299 327755 326772 CDS product extra-cytoplasmic solute receptor transl_table 11 protein_id gb|AEB82727.1||gnl|jgi|Alide2_0299 note KEGG: rme:Rmet_4433 extra-cytoplasmic solute receptor inference similar to AA sequence:KEGG:Rmet_4433 db_xref InterPro:IPR005064 db_xref InterPro:IPR006311 328667 327774 gene locus_tag Alide2_0300 328667 327774 CDS product 3-hydroxyisobutyrate dehydrogenase EC_number 1.1.1.31 transl_table 11 protein_id gb|AEB82728.1||gnl|jgi|Alide2_0300 note KEGG: vei:Veis_2089 6-phosphogluconate dehydrogenase, NAD-binding~PFAM: 6-phosphogluconate dehydrogenase, NAD-binding inference protein motif:PRIAM:1.1.1.31 db_xref InterPro:IPR006115 330141 328690 gene locus_tag Alide2_0301 330141 328690 CDS product Betaine-aldehyde dehydrogenase EC_number 1.2.1.8 transl_table 11 protein_id gb|AEB82729.1||gnl|jgi|Alide2_0301 note KEGG: vei:Veis_2088 betaine-aldehyde dehydrogenase~PFAM: Aldehyde dehydrogenase domain inference protein motif:PRIAM:1.2.1.8 db_xref InterPro:IPR015590 331064 330336 gene locus_tag Alide2_0302 331064 330336 CDS product transcriptional regulator, IclR family transl_table 11 protein_id gb|AEB82730.1||gnl|jgi|Alide2_0302 note KEGG: rme:Rmet_4432 IclR family transcriptional regulator family~PFAM: Transcription regulator IclR, N-terminal; Transcription regulator IclR, C-terminal~SMART: Transcription regulator IclR, N-terminal inference protein motif:PFAM:PF09339 db_xref GO:0003677 db_xref InterPro:IPR005471 db_xref InterPro:IPR014757 331337 331741 gene locus_tag Alide2_0303 331337 331741 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82731.1||gnl|jgi|Alide2_0303 note KEGG: axy:AXYL_03188 hypothetical protein inference similar to AA sequence:KEGG:AXYL_03188 331762 332610 gene locus_tag Alide2_0304 331762 332610 CDS product alpha/beta hydrolase fold protein transl_table 11 protein_id gb|AEB82732.1||gnl|jgi|Alide2_0304 note PFAM: Alpha/beta hydrolase fold-1~KEGG: axy:AXYL_03189 alpha/beta hydrolase fold family protein 10 inference protein motif:PFAM:PF00561 db_xref InterPro:IPR000073 332665 333819 gene locus_tag Alide2_0305 332665 333819 CDS product Extracellular ligand-binding receptor transl_table 11 protein_id gb|AEB82733.1||gnl|jgi|Alide2_0305 note PFAM: Extracellular ligand-binding receptor~KEGG: bav:BAV0983 ABC transporter, substrate-binding protein inference protein motif:PFAM:PF01094 db_xref InterPro:IPR001828 333841 334710 gene locus_tag Alide2_0306 333841 334710 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB82734.1||gnl|jgi|Alide2_0306 note PFAM: ABC transporter permease~KEGG: bav:BAV0982 ABC transporter, permease protein inference protein motif:PFAM:PF02653 db_xref GO:0005215 db_xref InterPro:IPR001851 334715 335713 gene locus_tag Alide2_0307 334715 335713 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB82735.1||gnl|jgi|Alide2_0307 note PFAM: ABC transporter permease~KEGG: dma:DMR_11370 ABC transporter permease protein inference protein motif:PFAM:PF02653 db_xref GO:0005215 db_xref InterPro:IPR001851 335710 336489 gene locus_tag Alide2_0308 335710 336489 CDS product Sulfate-transporting ATPase EC_number 3.6.3.25 transl_table 11 protein_id gb|AEB82736.1||gnl|jgi|Alide2_0308 note PFAM: ABC transporter-like~KEGG: pth:PTH_2348 ABC-type branched-chain amino acid transport systems, ATPase component~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.25 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 336476 337189 gene locus_tag Alide2_0309 336476 337189 CDS product Fe(3+)-transporting ATPase EC_number 3.6.3.30 transl_table 11 protein_id gb|AEB82737.1||gnl|jgi|Alide2_0309 note PFAM: ABC transporter-like~KEGG: oan:Oant_4420 ABC transporter related~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.30 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 337192 338214 gene locus_tag Alide2_0310 337192 338214 CDS product amidohydrolase 2 transl_table 11 protein_id gb|AEB82738.1||gnl|jgi|Alide2_0310 note PFAM: Amidohydrolase 2~KEGG: bbr:BB2353 hypothetical protein inference protein motif:PFAM:PF04909 db_xref GO:0003824 db_xref InterPro:IPR006992 338930 338199 gene locus_tag Alide2_0311 338930 338199 CDS product transcriptional regulator, GntR family transl_table 11 protein_id gb|AEB82739.1||gnl|jgi|Alide2_0311 note KEGG: ajs:Ajs_0229 GntR family transcriptional regulator~PFAM: HTH transcriptional regulator, GntR; GntR, C-terminal~SMART: HTH transcriptional regulator, GntR; GntR, C-terminal inference protein motif:PFAM:PF00392 db_xref GO:0003700 db_xref InterPro:IPR000524 db_xref InterPro:IPR011711 339014 340216 gene locus_tag Alide2_0312 339014 340216 CDS product Butyryl-CoA dehydrogenase EC_number 1.3.8.1 transl_table 11 protein_id gb|AEB82740.1||gnl|jgi|Alide2_0312 note KEGG: ajs:Ajs_0230 acyl-CoA dehydrogenase domain-containing protein~PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal inference protein motif:PRIAM:1.3.99.2 db_xref InterPro:IPR006090 db_xref InterPro:IPR006091 db_xref InterPro:IPR006092 340213 340986 gene locus_tag Alide2_0313 340213 340986 CDS product 3-oxoacyl-(acyl-carrier-protein) reductase EC_number 1.1.1.100 transl_table 11 protein_id gb|AEB82741.1||gnl|jgi|Alide2_0313 note KEGG: dia:Dtpsy_0225 short-chain dehydrogenase/reductase SDR~PFAM: Short-chain dehydrogenase/reductase SDR inference protein motif:PRIAM:1.1.1.100 db_xref InterPro:IPR002198 340983 342023 gene locus_tag Alide2_0314 340983 342023 CDS product aminoglycoside phosphotransferase transl_table 11 protein_id gb|AEB82742.1||gnl|jgi|Alide2_0314 note PFAM: Aminoglycoside phosphotransferase~KEGG: ajs:Ajs_0232 aminoglycoside phosphotransferase inference protein motif:PFAM:PF01636 db_xref InterPro:IPR002575 342921 342121 gene locus_tag Alide2_0315 342921 342121 CDS product exodeoxyribonuclease III Xth EC_number 4.2.99.18 transl_table 11 protein_id gb|AEB82743.1||gnl|jgi|Alide2_0315 note TIGRFAM: Exodeoxyribonuclease III xth; AP endonuclease, family 1~KEGG: dia:Dtpsy_0227 exodeoxyribonuclease III Xth~PFAM: Endonuclease/exonuclease/phosphatase inference protein motif:TFAM:TIGR00633 db_xref GO:0003677 db_xref GO:0004518 db_xref GO:0004519 db_xref InterPro:IPR000097 db_xref InterPro:IPR004808 db_xref InterPro:IPR005135 342932 343630 gene locus_tag Alide2_0316 342932 343630 CDS product orotate phosphoribosyltransferase EC_number 2.4.2.10 transl_table 11 protein_id gb|AEB82744.1||gnl|jgi|Alide2_0316 note TIGRFAM: Orotate phosphoribosyl transferase, clade 1~KEGG: dia:Dtpsy_0228 orotate phosphoribosyltransferase~PFAM: Phosphoribosyltransferase inference protein motif:TFAM:TIGR00336 db_xref GO:0004588 db_xref InterPro:IPR000836 db_xref InterPro:IPR004467 343651 344355 gene locus_tag Alide2_0317 343651 344355 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82745.1||gnl|jgi|Alide2_0317 note KEGG: dia:Dtpsy_0229 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_0229 345869 344424 gene locus_tag Alide2_0318 345869 344424 CDS product glutamyl-tRNA(Gln) amidotransferase, B subunit transl_table 11 protein_id gb|AEB82746.1||gnl|jgi|Alide2_0318 note TIGRFAM: Glutamyl-tRNA(Gln) amidotransferase, B subunit~PFAM: Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, N-terminal; Asn/Gln amidotransferase~KEGG: dac:Daci_0351 glutamyl-tRNA(Gln) amidotransferase subunit B~SMART: Asn/Gln amidotransferase inference protein motif:TFAM:TIGR00133 db_xref GO:0016874 db_xref InterPro:IPR004413 db_xref InterPro:IPR006075 db_xref InterPro:IPR018027 347362 345872 gene locus_tag Alide2_0319 347362 345872 CDS product Glutamyl-tRNA(Gln) amidotransferase subunit A EC_number 3.5.1.4 transl_table 11 protein_id gb|AEB82747.1||gnl|jgi|Alide2_0319 note PFAM: Amidase~TIGRFAM: Glutamyl-tRNA(Gln) amidotransferase A subunit~HAMAP: Glutamyl-tRNA(Gln) amidotransferase A subunit~KEGG: ajs:Ajs_0237 aspartyl/glutamyl-tRNA amidotransferase subunit A inference protein motif:HAMAP:MF_00120 db_xref InterPro:IPR000120 db_xref InterPro:IPR004412 347658 347359 gene locus_tag Alide2_0320 347658 347359 CDS product glutamyl-tRNA(Gln) amidotransferase, C subunit transl_table 11 protein_id gb|AEB82748.1||gnl|jgi|Alide2_0320 note KEGG: aav:Aave_0293 aspartyl/glutamyl-tRNA amidotransferase subunit C~TIGRFAM: Glu-tRNAGln amidotransferase, C subunit~PFAM: Glu-tRNAGln amidotransferase, C subunit inference protein motif:TFAM:TIGR00135 db_xref InterPro:IPR003837 347864 348907 gene locus_tag Alide2_0321 347864 348907 CDS product cell shape determining protein, MreB/Mrl family transl_table 11 protein_id gb|AEB82749.1||gnl|jgi|Alide2_0321 note KEGG: dia:Dtpsy_0233 rod shape-determining protein MreB~TIGRFAM: Cell shape determining protein MreB/Mrl~PFAM: Cell shape determining protein MreB/Mrl inference protein motif:TFAM:TIGR00904 db_xref InterPro:IPR004753 348937 349854 gene locus_tag Alide2_0322 348937 349854 CDS product rod shape-determining protein MreC transl_table 11 protein_id gb|AEB82750.1||gnl|jgi|Alide2_0322 note KEGG: ajs:Ajs_0240 rod shape-determining protein MreC~TIGRFAM: Rod shape-determining protein MreC, subtype~PFAM: Rod shape-determining protein MreC inference protein motif:TFAM:TIGR00219 db_xref InterPro:IPR005223 db_xref InterPro:IPR007221 349851 350372 gene locus_tag Alide2_0323 349851 350372 CDS product rod shape-determining protein MreD transl_table 11 protein_id gb|AEB82751.1||gnl|jgi|Alide2_0323 note KEGG: ajs:Ajs_0241 putative rod shape-determining MreD transmembrane protein~TIGRFAM: Cell shape-determining protein MreD~PFAM: Cell shape-determining protein MreD inference protein motif:TFAM:TIGR03426 db_xref InterPro:IPR007227 350389 352332 gene locus_tag Alide2_0324 350389 352332 CDS product penicillin-binding protein 2 EC_number 2.4.1.129 transl_table 11 protein_id gb|AEB82752.1||gnl|jgi|Alide2_0324 note TIGRFAM: Penicillin-binding protein 2~KEGG: dia:Dtpsy_0236 penicillin-binding protein 2~PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain inference protein motif:TFAM:TIGR03423 db_xref InterPro:IPR001460 db_xref InterPro:IPR005311 db_xref InterPro:IPR017790 353259 352348 gene locus_tag Alide2_0325 353259 352348 CDS product arginase EC_number 3.5.3.1 transl_table 11 protein_id gb|AEB82753.1||gnl|jgi|Alide2_0325 note TIGRFAM: Arginase, subgroup~KEGG: dia:Dtpsy_0241 arginase~PFAM: Ureohydrolase inference protein motif:TFAM:TIGR01229 db_xref GO:0004053 db_xref GO:0046872 db_xref InterPro:IPR006035 db_xref InterPro:IPR014033 354031 353273 gene locus_tag Alide2_0326 354031 353273 CDS product protein of unknown function DUF81 transl_table 11 protein_id gb|AEB82754.1||gnl|jgi|Alide2_0326 note PFAM: Protein of unknown function DUF81~KEGG: aav:Aave_0304 hypothetical protein inference protein motif:PFAM:PF01925 db_xref InterPro:IPR002781 355960 354278 gene locus_tag Alide2_0327 355960 354278 CDS product Choline dehydrogenase EC_number 1.1.99.1 transl_table 11 protein_id gb|AEB82755.1||gnl|jgi|Alide2_0327 note KEGG: ajs:Ajs_0249 glucose-methanol-choline oxidoreductase~PFAM: Glucose-methanol-choline oxidoreductase, N-terminal; Glucose-methanol-choline oxidoreductase, C-terminal inference protein motif:PRIAM:1.1.99.1 db_xref InterPro:IPR000172 db_xref InterPro:IPR007867 356227 357345 gene locus_tag Alide2_0328 356227 357345 CDS product protein of unknown function DUF140 transl_table 11 protein_id gb|AEB82756.1||gnl|jgi|Alide2_0328 note KEGG: ajs:Ajs_0250 hypothetical protein~TIGRFAM: Domain of unknown function DUF140~PFAM: Domain of unknown function DUF140 inference protein motif:TFAM:TIGR00056 db_xref InterPro:IPR003453 357348 358151 gene locus_tag Alide2_0329 357348 358151 CDS product Polyamine-transporting ATPase EC_number 3.6.3.31 transl_table 11 protein_id gb|AEB82757.1||gnl|jgi|Alide2_0329 note PFAM: ABC transporter-like~KEGG: ajs:Ajs_0251 ABC transporter related~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.31 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 358151 359128 gene locus_tag Alide2_0330 358151 359128 CDS product Mammalian cell entry related domain protein transl_table 11 protein_id gb|AEB82758.1||gnl|jgi|Alide2_0330 note PFAM: Mammalian cell entry-related~KEGG: dia:Dtpsy_0246 mammalian cell entry related domain protein inference protein motif:PFAM:PF02470 db_xref InterPro:IPR003399 359139 359819 gene locus_tag Alide2_0331 359139 359819 CDS product protein of unknown function DUF330 transl_table 11 protein_id gb|AEB82759.1||gnl|jgi|Alide2_0331 note KEGG: ajs:Ajs_0253 putative lipoprotein~manually curated~PFAM: Protein of unknown function DUF330 inference protein motif:PFAM:PF03886 db_xref InterPro:IPR005586 360072 359866 gene locus_tag Alide2_0332 pseudo 360273 361202 gene locus_tag Alide2_0333 360273 361202 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB82760.1||gnl|jgi|Alide2_0333 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: bph:Bphy_6198 LysR family transcriptional regulator inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 361283 363292 gene locus_tag Alide2_0334 361283 363292 CDS product aconitate hydratase domain-containing protein transl_table 11 protein_id gb|AEB82761.1||gnl|jgi|Alide2_0334 note PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; Aconitase A/isopropylmalate dehydratase small subunit, swivel~KEGG: cti:RALTA_B0856 putative hydrolyase inference protein motif:PFAM:PF00330 db_xref InterPro:IPR000573 db_xref InterPro:IPR001030 363330 364319 gene locus_tag Alide2_0335 363330 364319 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82762.1||gnl|jgi|Alide2_0335 note KEGG: cti:RALTA_B0858 conserved hypothetical protein; UPF0065 inference similar to AA sequence:KEGG:RALTA_B0858 db_xref InterPro:IPR005064 364328 364861 gene locus_tag Alide2_0336 364328 364861 CDS product regulator of ribonuclease activity A transl_table 11 protein_id gb|AEB82763.1||gnl|jgi|Alide2_0336 note KEGG: mmi:MMAR_5403 ribonuclease activity regulator protein RraA~TIGRFAM: Ribonuclease E inhibitor RraA~PFAM: Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase inference protein motif:TFAM:TIGR01935 db_xref GO:0008428 db_xref InterPro:IPR005493 db_xref InterPro:IPR010203 365447 364812 gene locus_tag Alide2_0337 365447 364812 CDS product multiple antibiotic resistance (MarC)-related protein transl_table 11 protein_id gb|AEB82764.1||gnl|jgi|Alide2_0337 note KEGG: dia:Dtpsy_0253 multiple antibiotic resistance (MarC)-related protein~TIGRFAM: Multiple antibiotic resistance (MarC)-related~PFAM: Multiple antibiotic resistance (MarC)-related inference protein motif:TFAM:TIGR00427 db_xref InterPro:IPR002771 365561 366250 gene locus_tag Alide2_0338 365561 366250 CDS product Carboxymethylenebutenolidase EC_number 3.1.1.45 transl_table 11 protein_id gb|AEB82765.1||gnl|jgi|Alide2_0338 note KEGG: dia:Dtpsy_0255 carboxymethylenebutenolidase~PFAM: Dienelactone hydrolase inference protein motif:PRIAM:3.1.1.45 db_xref InterPro:IPR002925 367882 366314 gene locus_tag Alide2_0339 367882 366314 CDS product drug resistance transporter, EmrB/QacA subfamily transl_table 11 protein_id gb|AEB82766.1||gnl|jgi|Alide2_0339 note KEGG: dia:Dtpsy_0256 drug resistance transporter, EmrB/QacA subfamily~TIGRFAM: Drug resistance transporter EmrB/QacA subfamily~PFAM: Major facilitator superfamily MFS-1 inference protein motif:TFAM:TIGR00711 db_xref InterPro:IPR004638 db_xref InterPro:IPR011701 369084 367885 gene locus_tag Alide2_0340 369084 367885 CDS product secretion protein HlyD family protein transl_table 11 protein_id gb|AEB82767.1||gnl|jgi|Alide2_0340 note PFAM: Secretion protein HlyD~KEGG: ajs:Ajs_0262 secretion protein HlyD family protein inference protein motif:PFAM:PF00529 db_xref GO:0008565 db_xref InterPro:IPR006143 370540 369119 gene locus_tag Alide2_0341 370540 369119 CDS product RND efflux system, outer membrane lipoprotein, NodT family transl_table 11 protein_id gb|AEB82768.1||gnl|jgi|Alide2_0341 note KEGG: dia:Dtpsy_0258 RND efflux system, outer membrane lipoprotein, NodT family~TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT~PFAM: Outer membrane efflux protein inference protein motif:TFAM:TIGR01845 db_xref GO:0005215 db_xref GO:0008289 db_xref InterPro:IPR003423 db_xref InterPro:IPR010131 371082 370570 gene locus_tag Alide2_0342 371082 370570 CDS product transcriptional regulator, MarR family transl_table 11 protein_id gb|AEB82769.1||gnl|jgi|Alide2_0342 note KEGG: ajs:Ajs_0264 MarR family transcriptional regulator~PFAM: HTH transcriptional regulator, MarR~SMART: HTH transcriptional regulator, MarR inference protein motif:PFAM:PF01047 db_xref GO:0003700 db_xref InterPro:IPR000835 372329 371154 gene locus_tag Alide2_0343 372329 371154 CDS product Mg2 transporter protein CorA family protein transl_table 11 protein_id gb|AEB82770.1||gnl|jgi|Alide2_0343 note PFAM: Mg2+ transporter protein, CorA-like~KEGG: dia:Dtpsy_0260 Mg2 transporter protein CorA family protein inference protein motif:PFAM:PF01544 db_xref GO:0046873 db_xref InterPro:IPR002523 373397 372369 gene locus_tag Alide2_0344 373397 372369 CDS product Porphobilinogen synthase EC_number 4.2.1.24 transl_table 11 protein_id gb|AEB82771.1||gnl|jgi|Alide2_0344 note KEGG: ajs:Ajs_0266 delta-aminolevulinic acid dehydratase~PFAM: Tetrapyrrole biosynthesis, porphobilinogen synthase inference protein motif:PRIAM:4.2.1.24 db_xref InterPro:IPR001731 373430 374152 gene locus_tag Alide2_0345 373430 374152 CDS product biotin/lipoate A/B protein ligase transl_table 11 protein_id gb|AEB82772.1||gnl|jgi|Alide2_0345 note PFAM: Biotin/lipoate A/B protein ligase~KEGG: dia:Dtpsy_0262 biotin/lipoate A/B protein ligase inference protein motif:PFAM:PF03099 db_xref GO:0003824 db_xref InterPro:IPR004143 374300 374728 gene locus_tag Alide2_0346 374300 374728 CDS product Uncharacterized protein family UPF0093 transl_table 11 protein_id gb|AEB82773.1||gnl|jgi|Alide2_0346 note PFAM: Uncharacterised protein family UPF0093~KEGG: dia:Dtpsy_0263 hypothetical protein inference protein motif:PFAM:PF03653 db_xref InterPro:IPR005265 374754 375851 gene locus_tag Alide2_0347 374754 375851 CDS product VanZ family protein transl_table 11 protein_id gb|AEB82774.1||gnl|jgi|Alide2_0347 note PFAM: VanZ-like~KEGG: ajs:Ajs_0269 VanZ family protein inference protein motif:PFAM:PF04892 db_xref InterPro:IPR006976 375861 376202 gene locus_tag Alide2_0348 375861 376202 CDS product ferredoxin-like protein transl_table 11 protein_id gb|AEB82775.1||gnl|jgi|Alide2_0348 note KEGG: dia:Dtpsy_0265 ferredoxin-like protein inference similar to AA sequence:KEGG:Dtpsy_0265 376286 376921 gene locus_tag Alide2_0349 376286 376921 CDS product putative transmembrane protein transl_table 11 protein_id gb|AEB82776.1||gnl|jgi|Alide2_0349 note KEGG: dia:Dtpsy_0266 putative transmembrane protein inference similar to AA sequence:KEGG:Dtpsy_0266 377023 378186 gene locus_tag Alide2_0350 377023 378186 CDS product Beta-lactamase EC_number 3.5.2.6 transl_table 11 protein_id gb|AEB82777.1||gnl|jgi|Alide2_0350 note PFAM: Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal; Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal~KEGG: ajs:Ajs_0272 penicillin-binding protein 6~SMART: Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal inference protein motif:PRIAM:3.5.2.6 db_xref InterPro:IPR001967 db_xref InterPro:IPR012907 378288 378665 gene locus_tag Alide2_0351 378288 378665 CDS product ribosomal protein S12 transl_table 11 protein_id gb|AEB82778.1||gnl|jgi|Alide2_0351 note KEGG: dia:Dtpsy_0268 30S ribosomal protein S12~TIGRFAM: Ribosomal protein S12, bacteria~PFAM: Ribosomal protein S12/S23 inference protein motif:TFAM:TIGR00981 db_xref GO:0003735 db_xref InterPro:IPR005679 db_xref InterPro:IPR006032 378829 379302 gene locus_tag Alide2_0352 378829 379302 CDS product ribosomal protein S7 transl_table 11 protein_id gb|AEB82779.1||gnl|jgi|Alide2_0352 note KEGG: xtr:100494042 30S ribosomal protein S7-like~TIGRFAM: Ribosomal protein S7, bacterial-type~PFAM: Ribosomal protein S7 inference protein motif:TFAM:TIGR01029 db_xref GO:0003735 db_xref InterPro:IPR000235 db_xref InterPro:IPR005717 379389 381497 gene locus_tag Alide2_0353 379389 381497 CDS product translation elongation factor G transl_table 11 protein_id gb|AEB82780.1||gnl|jgi|Alide2_0353 note TIGRFAM: Translation elongation factor EFG/EF2; Small GTP-binding protein~PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal~KEGG: ajs:Ajs_0275 elongation factor G~SMART: Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFG/EF2, C-terminal inference protein motif:TFAM:TIGR00484 db_xref GO:0003746 db_xref GO:0005525 db_xref InterPro:IPR000640 db_xref InterPro:IPR000795 db_xref InterPro:IPR004161 db_xref InterPro:IPR004540 db_xref InterPro:IPR005225 db_xref InterPro:IPR005517 381731 382921 gene locus_tag Alide2_0354 381731 382921 CDS product translation elongation factor Tu transl_table 11 protein_id gb|AEB82781.1||gnl|jgi|Alide2_0354 note KEGG: ajs:Ajs_0276 elongation factor Tu~TIGRFAM: Translation elongation factor EFTu/EF1A, bacterial/organelle; Small GTP-binding protein~PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, C-terminal; Translation elongation factor EFTu/EF1A, domain 2 inference protein motif:TFAM:TIGR00485 db_xref GO:0003746 db_xref GO:0005525 db_xref InterPro:IPR000795 db_xref InterPro:IPR004160 db_xref InterPro:IPR004161 db_xref InterPro:IPR004541 db_xref InterPro:IPR005225 382949 383260 gene locus_tag Alide2_0355 382949 383260 CDS product 30S ribosomal protein S10 transl_table 11 protein_id gb|AEB82782.1||gnl|jgi|Alide2_0355 note TIGRFAM: Ribosomal protein S10 subgroup~HAMAP: Ribosomal protein S10 subgroup~KEGG: vei:Veis_1263 30S ribosomal protein S10~PFAM: Ribosomal protein S10 inference protein motif:HAMAP:MF_00508 db_xref InterPro:IPR001848 db_xref InterPro:IPR005731 383477 384151 gene locus_tag Alide2_0356 383477 384151 CDS product 50S ribosomal protein L3 transl_table 11 protein_id gb|AEB82783.1||gnl|jgi|Alide2_0356 note KEGG: dia:Dtpsy_0273 50S ribosomal protein L3~TIGRFAM: Ribosomal protein L3, bacterial/organelle-type~PFAM: Ribosomal protein L3 inference protein motif:TFAM:TIGR03625 db_xref GO:0003735 db_xref InterPro:IPR000597 db_xref InterPro:IPR019927 384151 384771 gene locus_tag Alide2_0357 384151 384771 CDS product ribosomal protein L4/L1e transl_table 11 protein_id gb|AEB82784.1||gnl|jgi|Alide2_0357 note PFAM: Ribosomal protein L4/L1e~KEGG: dia:Dtpsy_0274 50S ribosomal protein L4 inference protein motif:PFAM:PF00573 db_xref GO:0003735 db_xref InterPro:IPR002136 384768 385082 gene locus_tag Alide2_0358 384768 385082 CDS product Ribosomal protein L25/L23 transl_table 11 protein_id gb|AEB82785.1||gnl|jgi|Alide2_0358 note PFAM: Ribosomal protein L25/L23~KEGG: dia:Dtpsy_0275 50S ribosomal protein L23 inference protein motif:PFAM:PF00276 db_xref GO:0003735 db_xref InterPro:IPR013025 385085 385909 gene locus_tag Alide2_0359 385085 385909 CDS product ribosomal protein L2 transl_table 11 protein_id gb|AEB82786.1||gnl|jgi|Alide2_0359 note KEGG: dia:Dtpsy_0276 50S ribosomal protein L2~TIGRFAM: Ribosomal protein L2, bacterial-type~PFAM: Ribosomal protein L2, C-terminal; Ribosomal Proteins L2, RNA binding domain inference protein motif:TFAM:TIGR01171 db_xref GO:0003723 db_xref GO:0003735 db_xref GO:0016740 db_xref InterPro:IPR005880 db_xref InterPro:IPR022666 db_xref InterPro:IPR022669 385920 386195 gene locus_tag Alide2_0360 385920 386195 CDS product ribosomal protein S19 transl_table 11 protein_id gb|AEB82787.1||gnl|jgi|Alide2_0360 note KEGG: xtr:100486557 30S ribosomal protein S19-like~TIGRFAM: Ribosomal protein S19, bacterial-type~PFAM: Ribosomal protein S19/S15 inference protein motif:TFAM:TIGR01050 db_xref GO:0003735 db_xref InterPro:IPR002222 db_xref InterPro:IPR005732 386205 386537 gene locus_tag Alide2_0361 386205 386537 CDS product ribosomal protein L22 transl_table 11 protein_id gb|AEB82788.1||gnl|jgi|Alide2_0361 note KEGG: dac:Daci_0396 50S ribosomal protein L22~TIGRFAM: Ribosomal protein L22, bacterial-type~PFAM: Ribosomal protein L22/L17 inference protein motif:TFAM:TIGR01044 db_xref GO:0003735 db_xref InterPro:IPR001063 db_xref InterPro:IPR005727 386555 387427 gene locus_tag Alide2_0362 386555 387427 CDS product ribosomal protein S3 transl_table 11 protein_id gb|AEB82789.1||gnl|jgi|Alide2_0362 note TIGRFAM: Ribosomal protein S3, bacterial~PFAM: Ribosomal protein S3, C-terminal; Ribosomal protein S3, N-terminal; K Homology, type 2~KEGG: aav:Aave_0344 30S ribosomal protein S3~SMART: K Homology inference protein motif:TFAM:TIGR01009 db_xref GO:0003735 db_xref InterPro:IPR001351 db_xref InterPro:IPR004044 db_xref InterPro:IPR004087 db_xref InterPro:IPR005704 db_xref InterPro:IPR008282 387430 387846 gene locus_tag Alide2_0363 387430 387846 CDS product ribosomal protein L16 transl_table 11 protein_id gb|AEB82790.1||gnl|jgi|Alide2_0363 note KEGG: dia:Dtpsy_0280 50S ribosomal protein L16~TIGRFAM: Ribosomal protein L16~PFAM: Ribosomal protein L10e/L16 inference protein motif:TFAM:TIGR01164 db_xref GO:0003735 db_xref GO:0019843 db_xref InterPro:IPR000114 db_xref InterPro:IPR016180 387858 388055 gene locus_tag Alide2_0364 387858 388055 CDS product ribosomal protein L29 transl_table 11 protein_id gb|AEB82791.1||gnl|jgi|Alide2_0364 note KEGG: dia:Dtpsy_0281 50S ribosomal protein L29~TIGRFAM: Ribosomal protein L29~PFAM: Ribosomal protein L29 inference protein motif:TFAM:TIGR00012 db_xref GO:0003735 db_xref InterPro:IPR001854 388069 388338 gene locus_tag Alide2_0365 388069 388338 CDS product 30S ribosomal protein S17 transl_table 11 protein_id gb|AEB82792.1||gnl|jgi|Alide2_0365 note KEGG: dia:Dtpsy_0282 30S ribosomal protein S17~TIGRFAM: Ribosomal protein S17, bacterial-type~PFAM: Ribosomal protein S17 inference protein motif:TFAM:TIGR03635 db_xref GO:0003735 db_xref InterPro:IPR000266 db_xref InterPro:IPR019984 388418 388924 gene locus_tag Alide2_0366 388418 388924 CDS product Redoxin domain protein transl_table 11 protein_id gb|AEB82793.1||gnl|jgi|Alide2_0366 note PFAM: Redoxin~KEGG: ajs:Ajs_0288 redoxin domain-containing protein inference protein motif:PFAM:PF08534 db_xref GO:0016491 db_xref InterPro:IPR013740 389578 389030 gene locus_tag Alide2_0367 389578 389030 CDS product GCN5-related N-acetyltransferase transl_table 11 protein_id gb|AEB82794.1||gnl|jgi|Alide2_0367 note PFAM: GCN5-related N-acetyltransferase (GNAT) domain~KEGG: dia:Dtpsy_0284 GCN5-related N-acetyltransferase inference protein motif:PFAM:PF00583 db_xref GO:0008080 db_xref InterPro:IPR000182 390321 389593 gene locus_tag Alide2_0368 390321 389593 CDS product cytochrome b561 transl_table 11 protein_id gb|AEB82795.1||gnl|jgi|Alide2_0368 note KEGG: dia:Dtpsy_0285 cytochrome b561 inference similar to AA sequence:KEGG:Dtpsy_0285 db_xref InterPro:IPR011577 391073 390570 gene locus_tag Alide2_0369 391073 390570 CDS product Redoxin domain protein transl_table 11 protein_id gb|AEB82796.1||gnl|jgi|Alide2_0369 note PFAM: Redoxin~KEGG: dia:Dtpsy_0287 redoxin domain protein inference protein motif:PFAM:PF08534 db_xref GO:0016491 db_xref InterPro:IPR013740 391146 391796 gene locus_tag Alide2_0370 391146 391796 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82797.1||gnl|jgi|Alide2_0370 note KEGG: dia:Dtpsy_0288 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_0288 391818 392228 gene locus_tag Alide2_0371 391818 392228 CDS product PTS system fructose subfamily IIA component transl_table 11 protein_id gb|AEB82798.1||gnl|jgi|Alide2_0371 note PFAM: Phosphotransferase system, fructose subfamily IIA component~KEGG: ajs:Ajs_0295 PTS system fructose subfamily IIA component inference protein motif:PFAM:PF03610 db_xref InterPro:IPR004701 392225 392494 gene locus_tag Alide2_0372 392225 392494 CDS product Phosphotransferase system, phosphocarrier protein HPr transl_table 11 protein_id gb|AEB82799.1||gnl|jgi|Alide2_0372 note KEGG: dia:Dtpsy_0291 phosphocarrier, HPr family~TIGRFAM: Phosphotransferase system, phosphocarrier HPr protein~PFAM: Phosphotransferase system, phosphocarrier HPr protein inference protein motif:TFAM:TIGR01003 db_xref GO:0005351 db_xref InterPro:IPR005698 392513 394279 gene locus_tag Alide2_0373 392513 394279 CDS product phosphoenolpyruvate-protein phosphotransferase EC_number 2.7.3.9 transl_table 11 protein_id gb|AEB82800.1||gnl|jgi|Alide2_0373 note TIGRFAM: Phosphoenolpyruvate-protein phosphotransferase~KEGG: ajs:Ajs_0297 phosphoenolpyruvate--protein phosphotransferase~PFAM: PEP-utilising enzyme; Phosphotransferase system, PEP-utilising enzyme, N-terminal; PEP-utilising enzyme, mobile domain inference protein motif:TFAM:TIGR01417 db_xref GO:0003735 db_xref InterPro:IPR000121 db_xref InterPro:IPR006318 db_xref InterPro:IPR008279 db_xref InterPro:IPR008731 395326 394346 gene locus_tag Alide2_0374 395326 394346 CDS product Lipoyl synthase EC_number 2.8.1.8 transl_table 11 protein_id gb|AEB82801.1||gnl|jgi|Alide2_0374 note KEGG: dia:Dtpsy_0293 lipoyl synthase~PFAM: Radical SAM~TIGRFAM: Lipoate synthase~HAMAP: Lipoate synthase~SMART: Elongator protein 3/MiaB/NifB inference protein motif:HAMAP:MF_00206 db_xref InterPro:IPR003698 db_xref InterPro:IPR006638 db_xref InterPro:IPR007197 396036 395344 gene locus_tag Alide2_0375 396036 395344 CDS product lipoate-protein ligase B EC_number 2.3.1.181 transl_table 11 protein_id gb|AEB82802.1||gnl|jgi|Alide2_0375 note TIGRFAM: Octanoyltransferase~KEGG: ajs:Ajs_0299 lipoate-protein ligase B~PFAM: Biotin/lipoate A/B protein ligase inference protein motif:TFAM:TIGR00214 db_xref GO:0016415 db_xref InterPro:IPR000544 db_xref InterPro:IPR004143 396344 396048 gene locus_tag Alide2_0376 396344 396048 CDS product protein of unknown function DUF493 transl_table 11 protein_id gb|AEB82803.1||gnl|jgi|Alide2_0376 note PFAM: Protein of unknown function DUF493~KEGG: dia:Dtpsy_0295 protein of unknown function DUF493 inference protein motif:PFAM:PF04359 db_xref InterPro:IPR007454 396628 397020 gene locus_tag Alide2_0377 396628 397020 CDS product ATP synthase I chain transl_table 11 protein_id gb|AEB82804.1||gnl|jgi|Alide2_0377 note PFAM: ATPase, F0 complex, subunit I~KEGG: aav:Aave_0365 putative ATP synthase protein I inference protein motif:PFAM:PF03899 db_xref GO:0015078 db_xref InterPro:IPR005598 397043 397906 gene locus_tag Alide2_0378 397043 397906 CDS product ATP synthase F0, A subunit transl_table 11 protein_id gb|AEB82805.1||gnl|jgi|Alide2_0378 note KEGG: dia:Dtpsy_0297 F0F1 ATP synthase subunit A~TIGRFAM: ATPase, F0 complex, subunit A~PFAM: ATPase, F0 complex, subunit A inference protein motif:TFAM:TIGR01131 db_xref GO:0015078 db_xref InterPro:IPR000568 397958 398206 gene locus_tag Alide2_0379 397958 398206 CDS product ATP synthase subunit c transl_table 11 protein_id gb|AEB82806.1||gnl|jgi|Alide2_0379 note TIGRFAM: ATPase, F0 complex, subunit C, bacterial/chloroplast~HAMAP: ATPase, F0 complex, subunit C~KEGG: dac:Daci_0415 F0F1 ATP synthase subunit C~PFAM: ATPase, F0/V0 complex, subunit C inference protein motif:HAMAP:MF_01396 db_xref InterPro:IPR000454 db_xref InterPro:IPR002379 db_xref InterPro:IPR005953 398245 398715 gene locus_tag Alide2_0380 398245 398715 CDS product ATP synthase subunit b transl_table 11 protein_id gb|AEB82807.1||gnl|jgi|Alide2_0380 note TIGRFAM: ATPase, F0 complex, subunit B, bacterial~HAMAP: ATPase, F0 complex, subunit B/B', bacterial/chloroplast~KEGG: dia:Dtpsy_0299 F0F1 ATP synthase subunit B~PFAM: ATPase, F0 complex, subunit B/B', bacterial/chloroplast inference protein motif:HAMAP:MF_01398 db_xref InterPro:IPR002146 db_xref InterPro:IPR005864 398734 399276 gene locus_tag Alide2_0381 398734 399276 CDS product ATP synthase F1, delta subunit transl_table 11 protein_id gb|AEB82808.1||gnl|jgi|Alide2_0381 note KEGG: dia:Dtpsy_0300 F0F1 ATP synthase subunit delta~TIGRFAM: ATPase, F1 complex, OSCP/delta subunit~PFAM: ATPase, F1 complex, OSCP/delta subunit inference protein motif:TFAM:TIGR01145 db_xref GO:0015078 db_xref InterPro:IPR000711 399322 400881 gene locus_tag Alide2_0382 399322 400881 CDS product ATP synthase F1, alpha subunit transl_table 11 protein_id gb|AEB82809.1||gnl|jgi|Alide2_0382 note KEGG: aav:Aave_0370 F0F1 ATP synthase subunit alpha~TIGRFAM: ATPase, F1 complex, alpha subunit~PFAM: ATPase, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal inference protein motif:TFAM:TIGR00962 db_xref GO:0005524 db_xref InterPro:IPR000194 db_xref InterPro:IPR000793 db_xref InterPro:IPR004100 db_xref InterPro:IPR005294 400900 401766 gene locus_tag Alide2_0383 400900 401766 CDS product ATP synthase F1, gamma subunit transl_table 11 protein_id gb|AEB82810.1||gnl|jgi|Alide2_0383 note KEGG: dia:Dtpsy_0302 F0F1 ATP synthase subunit gamma~TIGRFAM: ATPase, F1 complex, gamma subunit~PFAM: ATPase, F1 complex, gamma subunit inference protein motif:TFAM:TIGR01146 db_xref GO:0005524 db_xref InterPro:IPR000131 401795 403204 gene locus_tag Alide2_0384 401795 403204 CDS product ATP synthase F1, beta subunit transl_table 11 protein_id gb|AEB82811.1||gnl|jgi|Alide2_0384 note TIGRFAM: ATPase, F1 complex, beta subunit~PFAM: ATPase, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal~KEGG: dia:Dtpsy_0303 F0F1 ATP synthase subunit beta~SMART: ATPase, AAA+ type, core inference protein motif:TFAM:TIGR01039 db_xref GO:0017111 db_xref InterPro:IPR000194 db_xref InterPro:IPR000793 db_xref InterPro:IPR003593 db_xref InterPro:IPR004100 db_xref InterPro:IPR005722 403279 403695 gene locus_tag Alide2_0385 403279 403695 CDS product ATP synthase F1, epsilon subunit transl_table 11 protein_id gb|AEB82812.1||gnl|jgi|Alide2_0385 note KEGG: dia:Dtpsy_0304 F0F1 ATP synthase subunit epsilon~TIGRFAM: ATPase, F1 complex, delta/epsilon subunit~PFAM: ATPase, F1 complex, delta/epsilon subunit, N-terminal; ATPase, F1 complex, delta/epsilon subunit, C-terminal inference protein motif:TFAM:TIGR01216 db_xref GO:0005524 db_xref InterPro:IPR001469 db_xref InterPro:IPR020546 db_xref InterPro:IPR020547 403901 404329 gene locus_tag Alide2_0386 403901 404329 CDS product transposase IS3/IS911 family protein transl_table 11 protein_id gb|AEB82813.1||gnl|jgi|Alide2_0386 note PFAM: Transposase IS3/IS911family~KEGG: rfr:Rfer_2709 transposase IS3/IS911 inference protein motif:PFAM:PF01527 db_xref GO:0003677 db_xref GO:0004803 db_xref InterPro:IPR002514 404326 404658 gene locus_tag Alide2_0387 404326 404658 CDS product IS66 Orf2 family protein transl_table 11 protein_id gb|AEB82814.1||gnl|jgi|Alide2_0387 note PFAM: Transposase (putative), IS66 Orf2-like~KEGG: rfr:Rfer_2710 IS66 Orf2 like inference protein motif:PFAM:PF05717 db_xref InterPro:IPR008878 404741 406255 gene locus_tag Alide2_0388 404741 406255 CDS product transposase IS66 transl_table 11 protein_id gb|AEB82815.1||gnl|jgi|Alide2_0388 note PFAM: Transposase, IS66~KEGG: dia:Dtpsy_2523 transposase IS66 inference protein motif:PFAM:PF03050 db_xref InterPro:IPR004291 406909 406282 gene locus_tag Alide2_0389 pseudo 407842 406909 gene locus_tag Alide2_0390 pseudo 408367 409180 gene locus_tag Alide2_0391 pseudo 409719 409186 gene locus_tag Alide2_0392 409719 409186 CDS product protein of unknown function DUF477 transl_table 11 protein_id gb|AEB82816.1||gnl|jgi|Alide2_0392 note PFAM: Protein of unknown function DUF477~KEGG: ajs:Ajs_0314 hypothetical protein inference protein motif:PFAM:PF04536 db_xref InterPro:IPR007621 410621 409734 gene locus_tag Alide2_0393 410621 409734 CDS product protein of unknown function DUF477 transl_table 11 protein_id gb|AEB82817.1||gnl|jgi|Alide2_0393 note PFAM: Protein of unknown function DUF477~KEGG: ajs:Ajs_0315 hypothetical protein inference protein motif:PFAM:PF04536 db_xref InterPro:IPR007621 411230 410625 gene locus_tag Alide2_0394 411230 410625 CDS product LemA family protein transl_table 11 protein_id gb|AEB82818.1||gnl|jgi|Alide2_0394 note PFAM: LemA~KEGG: aav:Aave_0381 LemA family protein inference protein motif:PFAM:PF04011 db_xref InterPro:IPR007156 411351 411818 gene locus_tag Alide2_0395 411351 411818 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82819.1||gnl|jgi|Alide2_0395 note KEGG: dia:Dtpsy_0312 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_0312 411864 412400 gene locus_tag Alide2_0396 411864 412400 CDS product Protein of unknown function DUF2944 transl_table 11 protein_id gb|AEB82820.1||gnl|jgi|Alide2_0396 note PFAM: Protein of unknown function DUF2944~KEGG: ajs:Ajs_0319 hypothetical protein inference protein motif:PFAM:PF11161 db_xref InterPro:IPR021332 413392 412556 gene locus_tag Alide2_0397 413392 412556 CDS product cytochrome c class I transl_table 11 protein_id gb|AEB82821.1||gnl|jgi|Alide2_0397 note PFAM: Cytochrome c, class I~KEGG: aav:Aave_0385 cytochrome c, class I inference protein motif:PFAM:PF00034 db_xref GO:0005506 db_xref GO:0009055 db_xref GO:0020037 db_xref InterPro:IPR003088 414967 413522 gene locus_tag Alide2_0398 414967 413522 CDS product RND efflux system, outer membrane lipoprotein, NodT family transl_table 11 protein_id gb|AEB82822.1||gnl|jgi|Alide2_0398 note KEGG: dia:Dtpsy_0316 RND efflux system, outer membrane lipoprotein, NodT family~TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT~PFAM: Outer membrane efflux protein inference protein motif:TFAM:TIGR01845 db_xref GO:0005215 db_xref GO:0008289 db_xref InterPro:IPR003423 db_xref InterPro:IPR010131 418147 414992 gene locus_tag Alide2_0399 418147 414992 CDS product transporter, hydrophobe/amphiphile efflux-1 (HAE1) family transl_table 11 protein_id gb|AEB82823.1||gnl|jgi|Alide2_0399 note KEGG: dia:Dtpsy_0317 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family~TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1~PFAM: Acriflavin resistance protein inference protein motif:TFAM:TIGR00915 db_xref GO:0005215 db_xref InterPro:IPR001036 db_xref InterPro:IPR004764 419446 418166 gene locus_tag Alide2_0400 419446 418166 CDS product efflux transporter, RND family, MFP subunit transl_table 11 protein_id gb|AEB82824.1||gnl|jgi|Alide2_0400 note KEGG: dia:Dtpsy_0318 efflux transporter, RND family, MFP subunit~TIGRFAM: Secretion protein HlyD~PFAM: Secretion protein HlyD inference protein motif:TFAM:TIGR01730 db_xref GO:0008565 db_xref InterPro:IPR006143 419638 420258 gene locus_tag Alide2_0401 419638 420258 CDS product Tetracycline transcriptional repressor MAATS-type domain-containing protein transl_table 11 protein_id gb|AEB82825.1||gnl|jgi|Alide2_0401 note PFAM: Transcription regulator MAATS, C-terminal; Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal~KEGG: dia:Dtpsy_0319 transcriptional regulator, TetR family inference protein motif:PFAM:PF08361 db_xref GO:0003677 db_xref GO:0003700 db_xref InterPro:IPR001647 db_xref InterPro:IPR013572 420292 420367 gene locus_tag Alide2_R0001 note tRNA-Arg1 420292 420367 tRNA product tRNA-Arg 420516 420601 gene locus_tag Alide2_R0002 note tRNA-Tyr1 420516 420601 tRNA product tRNA-Tyr 420650 420723 gene locus_tag Alide2_R0003 note tRNA-Gly1 420650 420723 tRNA product tRNA-Gly 420764 420838 gene locus_tag Alide2_R0004 note tRNA-Thr1 420764 420838 tRNA product tRNA-Thr 420914 422104 gene locus_tag Alide2_0402 420914 422104 CDS product translation elongation factor Tu transl_table 11 protein_id gb|AEB82826.1||gnl|jgi|Alide2_0402 note KEGG: ajs:Ajs_0276 elongation factor Tu~TIGRFAM: Translation elongation factor EFTu/EF1A, bacterial/organelle; Small GTP-binding protein~PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, C-terminal; Translation elongation factor EFTu/EF1A, domain 2 inference protein motif:TFAM:TIGR00485 db_xref GO:0003746 db_xref GO:0005525 db_xref InterPro:IPR000795 db_xref InterPro:IPR004160 db_xref InterPro:IPR004161 db_xref InterPro:IPR004541 db_xref InterPro:IPR005225 422117 422192 gene locus_tag Alide2_R0005 note tRNA-Trp1 422117 422192 tRNA product tRNA-Trp 422281 422664 gene locus_tag Alide2_0403 422281 422664 CDS product preprotein translocase, SecE subunit transl_table 11 protein_id gb|AEB82827.1||gnl|jgi|Alide2_0403 note KEGG: ajs:Ajs_3903 preprotein translocase subunit SecE~TIGRFAM: SecE subunit of protein translocation complex~PFAM: Protein SecE/Sec61-gamma protein inference protein motif:TFAM:TIGR00964 db_xref GO:0015450 db_xref InterPro:IPR001901 db_xref InterPro:IPR005807 422664 423254 gene locus_tag Alide2_0404 422664 423254 CDS product NusG antitermination factor transl_table 11 protein_id gb|AEB82828.1||gnl|jgi|Alide2_0404 note TIGRFAM: Transcription antitermination protein, NusG~PFAM: Transcription antitermination protein, NusG, N-terminal; KOW~KEGG: dia:Dtpsy_3251 NusG antitermination factor~SMART: Transcription antitermination protein, NusG, N-terminal; KOW inference protein motif:TFAM:TIGR00922 db_xref GO:0003711 db_xref InterPro:IPR001062 db_xref InterPro:IPR005824 db_xref InterPro:IPR006645 423385 423816 gene locus_tag Alide2_0405 423385 423816 CDS product ribosomal protein L11 transl_table 11 protein_id gb|AEB82829.1||gnl|jgi|Alide2_0405 note TIGRFAM: Ribosomal protein L11, bacterial-type~PFAM: Ribosomal protein L11, N-terminal domain; Ribosomal protein L11, C-terminal domain~KEGG: aav:Aave_4535 50S ribosomal protein L11~SMART: Ribosomal protein L11 inference protein motif:TFAM:TIGR01632 db_xref GO:0003735 db_xref InterPro:IPR000911 db_xref InterPro:IPR006519 db_xref InterPro:IPR020783 db_xref InterPro:IPR020784 423817 424512 gene locus_tag Alide2_0406 423817 424512 CDS product ribosomal protein L1 transl_table 11 protein_id gb|AEB82830.1||gnl|jgi|Alide2_0406 note KEGG: dia:Dtpsy_3249 50S ribosomal protein L1~TIGRFAM: Ribosomal protein L1, bacterial-type~PFAM: Ribosomal protein L1 inference protein motif:TFAM:TIGR01169 db_xref GO:0003723 db_xref GO:0003735 db_xref InterPro:IPR002143 db_xref InterPro:IPR005878 424745 425251 gene locus_tag Alide2_0407 424745 425251 CDS product 50S ribosomal protein L10 transl_table 11 protein_id gb|AEB82831.1||gnl|jgi|Alide2_0407 note KEGG: aav:Aave_4533 50S ribosomal protein L10~HAMAP: Ribosomal protein L10~PFAM: Ribosomal protein L10/acidic P0 inference protein motif:HAMAP:MF_00362 db_xref InterPro:IPR001790 db_xref InterPro:IPR022973 425306 425686 gene locus_tag Alide2_0408 425306 425686 CDS product ribosomal protein L7/L12 transl_table 11 protein_id gb|AEB82832.1||gnl|jgi|Alide2_0408 note KEGG: dia:Dtpsy_3247 50S ribosomal protein L7/L12~TIGRFAM: Ribosomal protein L7/L12~PFAM: Ribosomal protein L7/L12, C-terminal inference protein motif:TFAM:TIGR00855 db_xref GO:0003735 db_xref InterPro:IPR000206 db_xref InterPro:IPR013823 425961 430085 gene locus_tag Alide2_0409 425961 430085 CDS product DNA-directed RNA polymerase, beta subunit transl_table 11 protein_id gb|AEB82833.1||gnl|jgi|Alide2_0409 note KEGG: aav:Aave_4531 DNA-directed RNA polymerase subunit beta~TIGRFAM: DNA-directed RNA polymerase, beta subunit, bacterial-type~PFAM: DNA-directed RNA polymerase, subunit 2, domain 6; RNA polymerase Rpb2, domain 2; RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 7; RNA polymerase, beta subunit, protrusion; DNA-directed RNA polymerase, beta subunit, external 1 domain inference protein motif:TFAM:TIGR02013 db_xref GO:0003677 db_xref GO:0003899 db_xref InterPro:IPR007120 db_xref InterPro:IPR007641 db_xref InterPro:IPR007642 db_xref InterPro:IPR007644 db_xref InterPro:IPR007645 db_xref InterPro:IPR010243 db_xref InterPro:IPR019462 430106 434335 gene locus_tag Alide2_0410 430106 434335 CDS product DNA-directed RNA polymerase, beta' subunit transl_table 11 protein_id gb|AEB82834.1||gnl|jgi|Alide2_0410 note TIGRFAM: DNA-directed RNA polymerase, subunit beta-prime~PFAM: RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 5; RNA polymerase Rpb1, domain 3; RNA polymerase, alpha subunit; RNA polymerase Rpb1, domain 4~KEGG: dia:Dtpsy_3245 DNA-directed RNA polymerase subunit beta'~SMART: RNA polymerase, N-terminal inference protein motif:TFAM:TIGR02386 db_xref GO:0003677 db_xref GO:0003899 db_xref InterPro:IPR000722 db_xref InterPro:IPR006592 db_xref InterPro:IPR007066 db_xref InterPro:IPR007080 db_xref InterPro:IPR007081 db_xref InterPro:IPR007083 db_xref InterPro:IPR012754 434455 435021 gene locus_tag Alide2_0411 434455 435021 CDS product LemA family protein transl_table 11 protein_id gb|AEB82835.1||gnl|jgi|Alide2_0411 note PFAM: LemA~KEGG: dia:Dtpsy_3244 hypothetical protein inference protein motif:PFAM:PF04011 db_xref InterPro:IPR007156 435018 436385 gene locus_tag Alide2_0412 435018 436385 CDS product sun protein transl_table 11 protein_id gb|AEB82836.1||gnl|jgi|Alide2_0412 note KEGG: dia:Dtpsy_3243 sun protein~TIGRFAM: Fmu, rRNA SAM-dependent methyltransferase~PFAM: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p inference protein motif:TFAM:TIGR00563 db_xref GO:0008649 db_xref InterPro:IPR001678 db_xref InterPro:IPR004573 436429 437010 gene locus_tag Alide2_0413 436429 437010 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82837.1||gnl|jgi|Alide2_0413 note KEGG: ajs:Ajs_3893 hypothetical protein inference similar to AA sequence:KEGG:Ajs_3893 437007 439295 gene locus_tag Alide2_0414 437007 439295 CDS product multi-sensor signal transduction histidine kinase transl_table 11 protein_id gb|AEB82838.1||gnl|jgi|Alide2_0414 note KEGG: ajs:Ajs_3892 multi-sensor signal transduction histidine kinase~PFAM: ATPase-like, ATP-binding domain; HAMP linker domain; PAS fold-4; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain~SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS; HAMP linker domain inference protein motif:PFAM:PF02518 db_xref GO:0000155 db_xref GO:0004871 db_xref GO:0005524 db_xref InterPro:IPR000014 db_xref InterPro:IPR003594 db_xref InterPro:IPR003660 db_xref InterPro:IPR003661 db_xref InterPro:IPR013656 439335 440030 gene locus_tag Alide2_0415 439335 440030 CDS product two component transcriptional regulator, Fis family transl_table 11 protein_id gb|AEB82839.1||gnl|jgi|Alide2_0415 note KEGG: dia:Dtpsy_3240 two component transcriptional regulator, fis family~PFAM: Signal transduction response regulator, receiver domain; Helix-turn-helix, Fis-type~SMART: Signal transduction response regulator, receiver domain inference protein motif:PFAM:PF00072 db_xref GO:0000156 db_xref GO:0003700 db_xref InterPro:IPR001789 db_xref InterPro:IPR002197 440092 440167 gene locus_tag Alide2_R0006 note tRNA-Phe1 440092 440167 tRNA product tRNA-Phe 440643 440383 gene locus_tag Alide2_0416 440643 440383 CDS product phage head-tail adaptor transl_table 11 protein_id gb|AEB82840.1||gnl|jgi|Alide2_0416 note TIGRFAM: Phage head-tail joining protein~KEGG: aav:Aave_1622 phage head-tail adaptor, putative inference protein motif:TFAM:TIGR01563 db_xref InterPro:IPR008767 441516 440683 gene locus_tag Alide2_0417 441516 440683 CDS product Integrase catalytic region transl_table 11 protein_id gb|AEB82841.1||gnl|jgi|Alide2_0417 note PFAM: Integrase, catalytic core~KEGG: tin:Tint_1916 integrase catalytic region inference protein motif:PFAM:PF00665 db_xref GO:0003677 db_xref InterPro:IPR001584 441815 441549 gene locus_tag Alide2_0418 441815 441549 CDS product transposase IS3/IS911 family protein transl_table 11 protein_id gb|AEB82842.1||gnl|jgi|Alide2_0418 note PFAM: Transposase IS3/IS911family~KEGG: pna:Pnap_4650 transposase IS3/IS911 family protein inference protein motif:PFAM:PF01527 db_xref GO:0003677 db_xref GO:0004803 db_xref InterPro:IPR002514 442233 441958 gene locus_tag Alide2_0419 442233 441958 CDS product uncharacterized phage DNA packaging-like protein transl_table 11 protein_id gb|AEB82843.1||gnl|jgi|Alide2_0419 note TIGRFAM: Bacteriophage HK022, Gp6~KEGG: bcm:Bcenmc03_1290 phage protein DNA packaging protein inference protein motif:TFAM:TIGR01560 db_xref InterPro:IPR006450 443529 442399 gene locus_tag Alide2_0420 pseudo 443822 443529 gene locus_tag Alide2_0421 pseudo 444341 444078 gene locus_tag Alide2_0422 444341 444078 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82844.1||gnl|jgi|Alide2_0422 inference ab initio prediction:Prodigal:1.4 444511 444338 gene locus_tag Alide2_0423 444511 444338 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82845.1||gnl|jgi|Alide2_0423 inference ab initio prediction:Prodigal:1.4 444693 444508 gene locus_tag Alide2_0424 444693 444508 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82846.1||gnl|jgi|Alide2_0424 inference ab initio prediction:Prodigal:1.4 445772 444693 gene locus_tag Alide2_0425 445772 444693 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82847.1||gnl|jgi|Alide2_0425 note KEGG: pol:Bpro_0958 putative major phage head protein/prohead proteinase inference similar to AA sequence:KEGG:Bpro_0958 446272 445865 gene locus_tag Alide2_0426 446272 445865 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82848.1||gnl|jgi|Alide2_0426 inference ab initio prediction:Prodigal:1.4 446603 446259 gene locus_tag Alide2_0427 446603 446259 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82849.1||gnl|jgi|Alide2_0427 note KEGG: pol:Bpro_2970 hypothetical protein inference similar to AA sequence:KEGG:Bpro_2970 447796 446600 gene locus_tag Alide2_0428 447796 446600 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82850.1||gnl|jgi|Alide2_0428 note KEGG: pol:Bpro_2969 hypothetical protein inference similar to AA sequence:KEGG:Bpro_2969 448257 447793 gene locus_tag Alide2_0429 448257 447793 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82851.1||gnl|jgi|Alide2_0429 note KEGG: pol:Bpro_2968 hypothetical protein inference similar to AA sequence:KEGG:Bpro_2968 db_xref InterPro:IPR002694 448468 448268 gene locus_tag Alide2_0430 448468 448268 CDS product Prophage CP4-57 regulatory transl_table 11 protein_id gb|AEB82852.1||gnl|jgi|Alide2_0430 note KEGG: drt:Dret_1611 phage transcriptional regulator, AlpA~manually curated~PFAM: Prophage CP4-57 regulatory inference protein motif:PFAM:PF05930 db_xref InterPro:IPR010260 449143 448949 gene locus_tag Alide2_0431 449143 448949 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82853.1||gnl|jgi|Alide2_0431 inference ab initio prediction:Prodigal:1.4 449366 449100 gene locus_tag Alide2_0432 449366 449100 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82854.1||gnl|jgi|Alide2_0432 inference ab initio prediction:Prodigal:1.4 450690 449467 gene locus_tag Alide2_0433 450690 449467 CDS product integrase family protein transl_table 11 protein_id gb|AEB82855.1||gnl|jgi|Alide2_0433 note PFAM: Integrase, catalytic core, phage~KEGG: dia:Dtpsy_3164 integrase family protein inference protein motif:PFAM:PF00589 db_xref GO:0003677 db_xref InterPro:IPR002104 451677 451055 gene locus_tag Alide2_0434 pseudo 451674 451919 gene locus_tag Alide2_0435 pseudo 454756 451934 gene locus_tag Alide2_0436 pseudo 452646 453776 gene locus_tag Alide2_0437 452646 453776 CDS product putative transposase transl_table 11 protein_id gb|AEB82856.1||gnl|jgi|Alide2_0437 note KEGG: pol:Bpro_2745 putative transposase inference similar to AA sequence:KEGG:Bpro_2745 453742 454035 gene locus_tag Alide2_0438 453742 454035 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82857.1||gnl|jgi|Alide2_0438 note KEGG: pol:Bpro_2744 hypothetical protein inference similar to AA sequence:KEGG:Bpro_2744 455763 454753 gene locus_tag Alide2_0439 455763 454753 CDS product UDP-glucuronate 5'-epimerase EC_number 5.1.3.12 transl_table 11 protein_id gb|AEB82858.1||gnl|jgi|Alide2_0439 note KEGG: dia:Dtpsy_0401 NAD-dependent epimerase/dehydratase~PFAM: NAD-dependent epimerase/dehydratase inference protein motif:PRIAM:5.1.3.12 db_xref InterPro:IPR001509 457277 455760 gene locus_tag Alide2_0440 457277 455760 CDS product glycosyltransferase transl_table 11 protein_id gb|AEB82859.1||gnl|jgi|Alide2_0440 note KEGG: dia:Dtpsy_0402 glycosyltransferase inference similar to AA sequence:KEGG:Dtpsy_0402 457381 458412 gene locus_tag Alide2_0441 457381 458412 CDS product glycosyl transferase family 2 transl_table 11 protein_id gb|AEB82860.1||gnl|jgi|Alide2_0441 note PFAM: Glycosyl transferase, family 2~KEGG: ajs:Ajs_0411 glycosyl transferase family protein inference protein motif:PFAM:PF00535 db_xref InterPro:IPR001173 458409 459332 gene locus_tag Alide2_0442 458409 459332 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82861.1||gnl|jgi|Alide2_0442 note KEGG: ajs:Ajs_0412 hypothetical protein inference similar to AA sequence:KEGG:Ajs_0412 460165 459329 gene locus_tag Alide2_0443 460165 459329 CDS product Ribosomal RNA small subunit methyltransferase I transl_table 11 protein_id gb|AEB82862.1||gnl|jgi|Alide2_0443 note PFAM: Tetrapyrrole methylase~manually curated~TIGRFAM: Uncharacterised protein family UPF0011~KEGG: dia:Dtpsy_0405 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase~HAMAP: Ribosomal RNA small subunit methyltransferase I inference protein motif:HAMAP:MF_01877 db_xref InterPro:IPR000878 db_xref InterPro:IPR008189 460246 460644 gene locus_tag Alide2_0444 460246 460644 CDS product UPF0102 protein yraN transl_table 11 protein_id gb|AEB82863.1||gnl|jgi|Alide2_0444 note TIGRFAM: Uncharacterised protein family UPF0102~HAMAP: Uncharacterised protein family UPF0102~KEGG: dia:Dtpsy_0406 hypothetical protein~PFAM: Uncharacterised protein family UPF0102 inference protein motif:HAMAP:MF_00048 db_xref InterPro:IPR003509 460705 461307 gene locus_tag Alide2_0445 460705 461307 CDS product sugar isomerase (SIS) transl_table 11 protein_id gb|AEB82864.1||gnl|jgi|Alide2_0445 note PFAM: Sugar isomerase (SIS)~KEGG: dia:Dtpsy_0407 phosphoheptose isomerase inference protein motif:PFAM:PF01380 db_xref GO:0005529 db_xref InterPro:IPR001347 461304 461969 gene locus_tag Alide2_0446 461304 461969 CDS product transport-associated protein transl_table 11 protein_id gb|AEB82865.1||gnl|jgi|Alide2_0446 note PFAM: Transport-associated~KEGG: ajs:Ajs_0416 transport-associated inference protein motif:PFAM:PF04972 db_xref InterPro:IPR007055 db_xref InterPro:IPR014004 462930 461998 gene locus_tag Alide2_0447 462930 461998 CDS product 2-hydroxy-3-oxopropionate reductase EC_number 1.1.1.60 transl_table 11 protein_id gb|AEB82866.1||gnl|jgi|Alide2_0447 note KEGG: dia:Dtpsy_0409 3-hydroxyisobutyrate dehydrogenase~PFAM: 6-phosphogluconate dehydrogenase, NAD-binding inference protein motif:PRIAM:1.1.1.60 db_xref InterPro:IPR006115 464147 463011 gene locus_tag Alide2_0448 464147 463011 CDS product twitching motility protein transl_table 11 protein_id gb|AEB82867.1||gnl|jgi|Alide2_0448 note KEGG: ajs:Ajs_0418 twitching motility protein~TIGRFAM: Pilus retraction protein PilT~PFAM: Type II secretion system protein E inference protein motif:TFAM:TIGR01420 db_xref GO:0005524 db_xref InterPro:IPR001482 db_xref InterPro:IPR006321 464802 464173 gene locus_tag Alide2_0449 464802 464173 CDS product putative transcriptional regulator, Crp/Fnr family transl_table 11 protein_id gb|AEB82868.1||gnl|jgi|Alide2_0449 note KEGG: dia:Dtpsy_0411 cyclic nucleotide-binding protein~PFAM: Cyclic nucleotide-binding domain~SMART: Cyclic nucleotide-binding domain inference protein motif:PFAM:PF00027 db_xref InterPro:IPR000595 465910 464867 gene locus_tag Alide2_0450 465910 464867 CDS product twitching motility protein transl_table 11 protein_id gb|AEB82869.1||gnl|jgi|Alide2_0450 note KEGG: aav:Aave_0637 twitching motility protein~TIGRFAM: Pilus retraction protein PilT~PFAM: Type II secretion system protein E inference protein motif:TFAM:TIGR01420 db_xref GO:0005524 db_xref InterPro:IPR001482 db_xref InterPro:IPR006321 465950 466672 gene locus_tag Alide2_0451 465950 466672 CDS product protein of unknown function UPF0001 transl_table 11 protein_id gb|AEB82870.1||gnl|jgi|Alide2_0451 note KEGG: dac:Daci_1069 alanine racemase domain-containing protein~TIGRFAM: pyridoxal phosphate-dependent enzyme, YBL036C type~PFAM: Alanine racemase, N-terminal inference protein motif:TFAM:TIGR00044 db_xref InterPro:IPR001608 db_xref InterPro:IPR011078 466713 467843 gene locus_tag Alide2_0452 466713 467843 CDS product aminotransferase class V transl_table 11 protein_id gb|AEB82871.1||gnl|jgi|Alide2_0452 note PFAM: Aminotransferase, class V/Cysteine desulfurase~KEGG: dia:Dtpsy_0414 aminotransferase class V inference protein motif:PFAM:PF00266 db_xref InterPro:IPR000192 468326 467904 gene locus_tag Alide2_0453 468326 467904 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82872.1||gnl|jgi|Alide2_0453 note manually curated~KEGG: aav:Aave_0642 hypothetical protein inference similar to AA sequence:KEGG:Aave_0642 468511 469812 gene locus_tag Alide2_0454 468511 469812 CDS product protein of unknown function DUF445 transl_table 11 protein_id gb|AEB82873.1||gnl|jgi|Alide2_0454 note PFAM: Protein of unknown function DUF445, transmembrane~KEGG: ajs:Ajs_0423 hypothetical protein inference protein motif:PFAM:PF04286 db_xref InterPro:IPR007383 471363 469870 gene locus_tag Alide2_0455 471363 469870 CDS product D-lactate dehydrogenase (cytochrome) EC_number 1.1.2.4 transl_table 11 protein_id gb|AEB82874.1||gnl|jgi|Alide2_0455 note KEGG: dia:Dtpsy_0417 FAD linked oxidase domain protein~PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal inference protein motif:PRIAM:1.1.2.4 db_xref InterPro:IPR004113 db_xref InterPro:IPR006094 472326 471430 gene locus_tag Alide2_0456 472326 471430 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB82875.1||gnl|jgi|Alide2_0456 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: dia:Dtpsy_0418 transcriptional regulator, LysR family inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 473174 472326 gene locus_tag Alide2_0457 473174 472326 CDS product formyltetrahydrofolate deformylase EC_number 3.5.1.10 transl_table 11 protein_id gb|AEB82876.1||gnl|jgi|Alide2_0457 note TIGRFAM: Formyltetrahydrofolate deformylase~KEGG: xtr:100487869 formyltetrahydrofolate deformylase-like~PFAM: Formyl transferase, N-terminal; Amino acid-binding ACT inference protein motif:TFAM:TIGR00655 db_xref GO:0008864 db_xref InterPro:IPR002376 db_xref InterPro:IPR002912 db_xref InterPro:IPR004810 473220 475886 gene locus_tag Alide2_0458 473220 475886 CDS product diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) transl_table 11 protein_id gb|AEB82877.1||gnl|jgi|Alide2_0458 note TIGRFAM: Diguanylate cyclase, predicted; PAS~PFAM: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS fold; PAS fold-3; PAS fold-4~KEGG: ctt:CtCNB1_4372 diguanylate cyclase/phosphodiesterase with~SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS; PAC motif inference protein motif:TFAM:TIGR00254 db_xref GO:0004871 db_xref InterPro:IPR000014 db_xref InterPro:IPR000160 db_xref InterPro:IPR001610 db_xref InterPro:IPR001633 db_xref InterPro:IPR013655 db_xref InterPro:IPR013656 db_xref InterPro:IPR013767 476747 475887 gene locus_tag Alide2_0459 476747 475887 CDS product protein of unknown function DUF399 transl_table 11 protein_id gb|AEB82878.1||gnl|jgi|Alide2_0459 note PFAM: Domain of unknown function DUF399~KEGG: dia:Dtpsy_0421 protein of unknown function DUF399 inference protein motif:PFAM:PF04187 db_xref InterPro:IPR007314 477014 479449 gene locus_tag Alide2_0460 477014 479449 CDS product ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent EC_number 1.17.4.1 transl_table 11 protein_id gb|AEB82879.1||gnl|jgi|Alide2_0460 note TIGRFAM: Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent~KEGG: ajs:Ajs_0431 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent~PFAM: Ribonucleotide reductase large subunit, C-terminal; Ribonucleotide reductase large subunit, N-terminal inference protein motif:TFAM:TIGR02504 db_xref GO:0000166 db_xref GO:0004748 db_xref GO:0031419 db_xref InterPro:IPR000788 db_xref InterPro:IPR013344 db_xref InterPro:IPR013509 479628 481544 gene locus_tag Alide2_0461 479628 481544 CDS product multi-sensor signal transduction histidine kinase transl_table 11 protein_id gb|AEB82880.1||gnl|jgi|Alide2_0461 note KEGG: dia:Dtpsy_0423 GAF sensor signal transduction histidine kinase~PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; HAMP linker domain; GAF~SMART: ATPase-like, ATP-binding domain; HAMP linker domain inference protein motif:PFAM:PF02518 db_xref GO:0000155 db_xref GO:0004871 db_xref GO:0005524 db_xref GO:0046983 db_xref InterPro:IPR003018 db_xref InterPro:IPR003594 db_xref InterPro:IPR003660 db_xref InterPro:IPR011712 481541 482215 gene locus_tag Alide2_0462 481541 482215 CDS product two component transcriptional regulator, LuxR family transl_table 11 protein_id gb|AEB82881.1||gnl|jgi|Alide2_0462 note KEGG: dia:Dtpsy_0424 two component transcriptional regulator, LuxR family~PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal~SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain inference protein motif:PFAM:PF00072 db_xref GO:0000156 db_xref GO:0003700 db_xref GO:0043565 db_xref InterPro:IPR000792 db_xref InterPro:IPR001789 482444 483739 gene locus_tag Alide2_0463 482444 483739 CDS product major facilitator superfamily MFS_1 transl_table 11 protein_id gb|AEB82882.1||gnl|jgi|Alide2_0463 note PFAM: Major facilitator superfamily MFS-1~KEGG: ajs:Ajs_0434 major facilitator superfamily transporter inference protein motif:PFAM:PF07690 db_xref InterPro:IPR011701 483758 485203 gene locus_tag Alide2_0464 483758 485203 CDS product nitrite transporter transl_table 11 protein_id gb|AEB82883.1||gnl|jgi|Alide2_0464 note KEGG: xtr:100497879 nitrite extrusion protein 1-like~TIGRFAM: Nitrate transporter~PFAM: Major facilitator superfamily MFS-1 inference protein motif:TFAM:TIGR00886 db_xref GO:0015103 db_xref InterPro:IPR004737 db_xref InterPro:IPR011701 485240 489034 gene locus_tag Alide2_0465 485240 489034 CDS product nitrate reductase, alpha subunit EC_number 1.7.99.4 transl_table 11 protein_id gb|AEB82884.1||gnl|jgi|Alide2_0465 note SMART: Molybdopterin oxidoreductase, Fe4S4 domain~TIGRFAM: Nitrate reductase, alpha subunit~KEGG: ajs:Ajs_0436 respiratory nitrate reductase alpha subunit apoprotein~PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide-binding domain inference protein motif:TFAM:TIGR01580 db_xref GO:0008940 db_xref InterPro:IPR006468 db_xref InterPro:IPR006656 db_xref InterPro:IPR006657 db_xref InterPro:IPR006963 489053 490576 gene locus_tag Alide2_0466 489053 490576 CDS product nitrate reductase, beta subunit EC_number 1.7.99.4 transl_table 11 protein_id gb|AEB82885.1||gnl|jgi|Alide2_0466 note KEGG: dia:Dtpsy_0428 nitrate reductase, beta subunit~TIGRFAM: Nitrate reductase, beta subunit inference protein motif:TFAM:TIGR01660 db_xref GO:0008940 db_xref InterPro:IPR006547 490588 491289 gene locus_tag Alide2_0467 490588 491289 CDS product nitrate reductase molybdenum cofactor assembly chaperone EC_number 1.7.99.4 transl_table 11 protein_id gb|AEB82886.1||gnl|jgi|Alide2_0467 note TIGRFAM: Nitrate reductase chaperone, NarJ~KEGG: dia:Dtpsy_0429 nitrate reductase molybdenum cofactor assembly chaperone~PFAM: DMSO/Nitrate reductase chaperone inference protein motif:TFAM:TIGR00684 db_xref GO:0051082 db_xref InterPro:IPR003765 db_xref InterPro:IPR020945 491286 492014 gene locus_tag Alide2_0468 491286 492014 CDS product respiratory nitrate reductase, gamma subunit EC_number 1.7.99.4 transl_table 11 protein_id gb|AEB82887.1||gnl|jgi|Alide2_0468 note TIGRFAM: Nitrate reductase, gamma subunit~KEGG: dia:Dtpsy_0430 respiratory nitrate reductase, gamma subunit~PFAM: Nitrate reductase, gamma subunit inference protein motif:TFAM:TIGR00351 db_xref GO:0008940 db_xref InterPro:IPR003816 492142 492969 gene locus_tag Alide2_0469 492142 492969 CDS product PpiC-type peptidyl-prolyl cis-trans isomerase transl_table 11 protein_id gb|AEB82888.1||gnl|jgi|Alide2_0469 note PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type~KEGG: dia:Dtpsy_0431 PpiC-type peptidyl-prolyl cis-trans isomerase inference protein motif:PFAM:PF00639 db_xref GO:0016853 db_xref InterPro:IPR000297 493004 493681 gene locus_tag Alide2_0470 493004 493681 CDS product Carbonate dehydratase EC_number 4.2.1.1 transl_table 11 protein_id gb|AEB82889.1||gnl|jgi|Alide2_0470 note PFAM: Carbonic anhydrase~KEGG: dia:Dtpsy_0432 carbonate dehydratase~SMART: Carbonic anhydrase inference protein motif:PRIAM:4.2.1.1 db_xref InterPro:IPR001765 493681 494331 gene locus_tag Alide2_0471 493681 494331 CDS product nitroreductase transl_table 11 protein_id gb|AEB82890.1||gnl|jgi|Alide2_0471 note PFAM: Nitroreductase-like~KEGG: dia:Dtpsy_0434 nitroreductase inference protein motif:PFAM:PF00881 db_xref GO:0016491 db_xref InterPro:IPR000415 494328 494747 gene locus_tag Alide2_0472 494328 494747 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82891.1||gnl|jgi|Alide2_0472 note KEGG: dia:Dtpsy_0435 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_0435 494801 495349 gene locus_tag Alide2_0473 494801 495349 CDS product hemerythrin HHE cation binding domain protein transl_table 11 protein_id gb|AEB82892.1||gnl|jgi|Alide2_0473 note KEGG: dia:Dtpsy_0436 hemerythrin HHE cation binding domain protein inference similar to AA sequence:KEGG:Dtpsy_0436 db_xref InterPro:IPR012312 495826 495539 gene locus_tag Alide2_0474 495826 495539 CDS product Protein of unknown function DUF3567 transl_table 11 protein_id gb|AEB82893.1||gnl|jgi|Alide2_0474 note PFAM: Protein of unknown function DUF3567~KEGG: ajs:Ajs_0446 hypothetical protein inference protein motif:PFAM:PF12091 db_xref InterPro:IPR021951 497111 495960 gene locus_tag Alide2_0475 497111 495960 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82894.1||gnl|jgi|Alide2_0475 note KEGG: ajs:Ajs_0447 hypothetical protein inference similar to AA sequence:KEGG:Ajs_0447 497293 498282 gene locus_tag Alide2_0476 497293 498282 CDS product fumarylacetoacetate (FAA) hydrolase transl_table 11 protein_id gb|AEB82895.1||gnl|jgi|Alide2_0476 note PFAM: Fumarylacetoacetase, C-terminal-like~KEGG: ajs:Ajs_0449 fumarylacetoacetate (FAA) hydrolase inference protein motif:PFAM:PF01557 db_xref GO:0003824 db_xref InterPro:IPR002529 498439 500643 gene locus_tag Alide2_0477 498439 500643 CDS product Tetratricopeptide TPR_1 repeat-containing protein transl_table 11 protein_id gb|AEB82896.1||gnl|jgi|Alide2_0477 note KEGG: cph:Cpha266_1840 TPR repeat-containing protein~PFAM: Tetratricopeptide TPR-1; Tetratricopeptide TPR2~SMART: Tetratricopeptide repeat inference protein motif:PFAM:PF00515 db_xref InterPro:IPR001440 db_xref InterPro:IPR013105 db_xref InterPro:IPR019734 502779 500704 gene locus_tag Alide2_0478 502779 500704 CDS product Trimethylamine-N-oxide reductase (cytochrome c) EC_number 1.7.2.3 transl_table 11 protein_id gb|AEB82897.1||gnl|jgi|Alide2_0478 note PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide-binding domain; Molybdopterin oxidoreductase, Fe4S4 domain~KEGG: ajs:Ajs_0451 molybdopterin oxidoreductase~SMART: Molybdopterin oxidoreductase, Fe4S4 domain inference protein motif:PRIAM:1.7.2.3 db_xref InterPro:IPR006656 db_xref InterPro:IPR006657 db_xref InterPro:IPR006963 503928 502897 gene locus_tag Alide2_0479 503928 502897 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82898.1||gnl|jgi|Alide2_0479 note KEGG: vei:Veis_1579 hypothetical protein inference similar to AA sequence:KEGG:Veis_1579 db_xref InterPro:IPR005064 504877 503969 gene locus_tag Alide2_0480 504877 503969 CDS product Citryl-CoA lyase EC_number 4.1.3.34 transl_table 11 protein_id gb|AEB82899.1||gnl|jgi|Alide2_0480 note KEGG: vei:Veis_1580 citryl-CoA lyase~PFAM: Aldehyde-lyase domain inference protein motif:PRIAM:4.1.3.34 db_xref InterPro:IPR005000 506125 504893 gene locus_tag Alide2_0481 506125 504893 CDS product Formyl-CoA transferase EC_number 2.8.3.16 transl_table 11 protein_id gb|AEB82900.1||gnl|jgi|Alide2_0481 note KEGG: vei:Veis_1581 formyl-CoA transferase~PFAM: CoA-transferase family III inference protein motif:PRIAM:2.8.3.16 db_xref InterPro:IPR003673 506625 506122 gene locus_tag Alide2_0482 506625 506122 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82901.1||gnl|jgi|Alide2_0482 note KEGG: cti:RALTA_B1741 hypothetical protein inference similar to AA sequence:KEGG:RALTA_B1741 507872 506622 gene locus_tag Alide2_0483 507872 506622 CDS product Butyryl-CoA dehydrogenase EC_number 1.3.8.1 transl_table 11 protein_id gb|AEB82902.1||gnl|jgi|Alide2_0483 note KEGG: cti:RALTA_B1742 putative acyl CoA dehydrogenase oxidoreductase protein~PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain inference protein motif:PRIAM:1.3.99.2 db_xref InterPro:IPR006090 db_xref InterPro:IPR006091 db_xref InterPro:IPR006092 508380 507877 gene locus_tag Alide2_0484 508380 507877 CDS product MaoC domain protein dehydratase transl_table 11 protein_id gb|AEB82903.1||gnl|jgi|Alide2_0484 note PFAM: MaoC-like dehydratase~KEGG: cti:RALTA_B1743 hypothetical protein inference protein motif:PFAM:PF01575 db_xref GO:0016491 db_xref InterPro:IPR002539 509756 508377 gene locus_tag Alide2_0485 509756 508377 CDS product MmgE/PrpD family protein transl_table 11 protein_id gb|AEB82904.1||gnl|jgi|Alide2_0485 note PFAM: MmgE/PrpD~KEGG: vei:Veis_1585 MmgE/PrpD family protein inference protein motif:PFAM:PF03972 db_xref GO:0047547 db_xref InterPro:IPR005656 509962 510837 gene locus_tag Alide2_0486 509962 510837 CDS product Citryl-CoA lyase EC_number 4.1.3.34 transl_table 11 protein_id gb|AEB82905.1||gnl|jgi|Alide2_0486 note KEGG: xau:Xaut_1974 citryl-CoA lyase~PFAM: Aldehyde-lyase domain inference protein motif:PRIAM:4.1.3.34 db_xref InterPro:IPR005000 510844 511602 gene locus_tag Alide2_0487 510844 511602 CDS product transcriptional regulator, IclR family transl_table 11 protein_id gb|AEB82906.1||gnl|jgi|Alide2_0487 note PFAM: Transcription regulator IclR, N-terminal; Transcription regulator IclR, C-terminal~KEGG: rcu:RCOM_0002820 Transcriptional regulator kdgR, putative inference protein motif:PFAM:PF09339 db_xref GO:0003677 db_xref InterPro:IPR005471 db_xref InterPro:IPR014757 511704 512909 gene locus_tag Alide2_0488 511704 512909 CDS product amidohydrolase EC_number 3.5.1.32 transl_table 11 protein_id gb|AEB82907.1||gnl|jgi|Alide2_0488 note TIGRFAM: Peptidase M20D, amidohydrolase~KEGG: dia:Dtpsy_0444 amidohydrolase~PFAM: Peptidase M20; Peptidase M20, dimerisation inference protein motif:TFAM:TIGR01891 db_xref GO:0016787 db_xref InterPro:IPR002933 db_xref InterPro:IPR010168 db_xref InterPro:IPR011650 512978 513235 gene locus_tag Alide2_0489 512978 513235 CDS product acyl-coA-binding protein ACBP transl_table 11 protein_id gb|AEB82908.1||gnl|jgi|Alide2_0489 note PFAM: Acyl-CoA-binding protein, ACBP~KEGG: dia:Dtpsy_0446 acyl-coA-binding protein ACBP inference protein motif:PFAM:PF00887 db_xref GO:0000062 db_xref InterPro:IPR000582 514341 513238 gene locus_tag Alide2_0490 514341 513238 CDS product aminopeptidase transl_table 11 protein_id gb|AEB82909.1||gnl|jgi|Alide2_0490 note PFAM: aminopeptidase~KEGG: dia:Dtpsy_0447 putative zinc protease protein inference protein motif:PFAM:PF10023 db_xref InterPro:IPR014553 514348 515007 gene locus_tag Alide2_0491 514348 515007 CDS product DNA-3-methyladenine glycosylase I EC_number 3.2.2.20 transl_table 11 protein_id gb|AEB82910.1||gnl|jgi|Alide2_0491 note KEGG: ajs:Ajs_0457 DNA-3-methyladenine glycosylase I~PFAM: Methyladenine glycosylase inference protein motif:PRIAM:3.2.2.20 db_xref InterPro:IPR005019 515219 515058 gene locus_tag Alide2_0492 515219 515058 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82911.1||gnl|jgi|Alide2_0492 note KEGG: dia:Dtpsy_0450 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_0450 515500 516798 gene locus_tag Alide2_0493 515500 516798 CDS product Cyclopropane-fatty-acyl-phospholipid synthase EC_number 2.1.1.79 transl_table 11 protein_id gb|AEB82912.1||gnl|jgi|Alide2_0493 note KEGG: ajs:Ajs_0460 cyclopropane-fatty-acyl-phospholipid synthase~PFAM: Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase inference protein motif:PRIAM:2.1.1.79 db_xref InterPro:IPR003333 516820 517140 gene locus_tag Alide2_0494 516820 517140 CDS product Domain of unknown function DUF1840 transl_table 11 protein_id gb|AEB82913.1||gnl|jgi|Alide2_0494 note PFAM: Protein of unknown function DUF1840~KEGG: dia:Dtpsy_0452 hypothetical protein inference protein motif:PFAM:PF08895 db_xref InterPro:IPR014991 518179 517163 gene locus_tag Alide2_0495 518179 517163 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82914.1||gnl|jgi|Alide2_0495 note KEGG: ajs:Ajs_0462 hypothetical protein inference similar to AA sequence:KEGG:Ajs_0462 db_xref InterPro:IPR005064 519311 518322 gene locus_tag Alide2_0496 519311 518322 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82915.1||gnl|jgi|Alide2_0496 note KEGG: vap:Vapar_5015 hypothetical protein inference similar to AA sequence:KEGG:Vapar_5015 db_xref InterPro:IPR005064 520685 519438 gene locus_tag Alide2_0497 520685 519438 CDS product AMP-dependent synthetase and ligase transl_table 11 protein_id gb|AEB82916.1||gnl|jgi|Alide2_0497 note PFAM: AMP-dependent synthetase/ligase~KEGG: dia:Dtpsy_0455 putative phenylacetate-CoA ligase inference protein motif:PFAM:PF00501 db_xref GO:0003824 db_xref InterPro:IPR000873 521618 520776 gene locus_tag Alide2_0498 521618 520776 CDS product ABC transporter related protein transl_table 11 protein_id gb|AEB82917.1||gnl|jgi|Alide2_0498 note KEGG: ctt:CtCNB1_4329 high-affinity branched-chain amino acid transport ATP-binding protein LivF~PFAM: ABC transporter-like~SMART: ATPase, AAA+ type, core inference protein motif:PFAM:PF00005 db_xref GO:0005524 db_xref GO:0016887 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 523071 521758 gene locus_tag Alide2_0499 523071 521758 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82918.1||gnl|jgi|Alide2_0499 note KEGG: dac:Daci_1155 hypothetical protein inference similar to AA sequence:KEGG:Daci_1155 524194 523130 gene locus_tag Alide2_0500 524194 523130 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB82919.1||gnl|jgi|Alide2_0500 note PFAM: ABC transporter permease~KEGG: ctt:CtCNB1_4327 membrane protein inference protein motif:PFAM:PF02653 db_xref GO:0005215 db_xref InterPro:IPR001851 525145 524216 gene locus_tag Alide2_0501 525145 524216 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB82920.1||gnl|jgi|Alide2_0501 note PFAM: ABC transporter permease~KEGG: ctt:CtCNB1_4326 high-affinity branched-chain amino acidtransport system permease protein LivH inference protein motif:PFAM:PF02653 db_xref GO:0005215 db_xref InterPro:IPR001851 525951 525166 gene locus_tag Alide2_0502 525951 525166 CDS product Sulfate-transporting ATPase EC_number 3.6.3.25 transl_table 11 protein_id gb|AEB82921.1||gnl|jgi|Alide2_0502 note PFAM: ABC transporter-like~KEGG: dac:Daci_1158 ABC transporter-like protein~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.25 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 527900 525969 gene locus_tag Alide2_0503 527900 525969 CDS product Long-chain-fatty-acid--CoA ligase EC_number 6.2.1.3 transl_table 11 protein_id gb|AEB82922.1||gnl|jgi|Alide2_0503 note KEGG: ajs:Ajs_0470 AMP-dependent synthetase and ligase~PFAM: AMP-dependent synthetase/ligase inference protein motif:PRIAM:6.2.1.3 db_xref InterPro:IPR000873 528121 529812 gene locus_tag Alide2_0504 528121 529812 CDS product Peptidoglycan-binding domain 1 protein transl_table 11 protein_id gb|AEB82923.1||gnl|jgi|Alide2_0504 note KEGG: dia:Dtpsy_0462 peptidoglycan-binding domain 1 protein~PFAM: Peptidoglycan binding-like~SMART: ATPase, AAA+ type, core inference protein motif:PFAM:PF01471 db_xref InterPro:IPR002477 db_xref InterPro:IPR003593 529817 530521 gene locus_tag Alide2_0505 529817 530521 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82924.1||gnl|jgi|Alide2_0505 note KEGG: ajs:Ajs_0472 hypothetical protein inference similar to AA sequence:KEGG:Ajs_0472 530651 531442 gene locus_tag Alide2_0506 530651 531442 CDS product putative transcriptional regulator, Crp/Fnr family transl_table 11 protein_id gb|AEB82925.1||gnl|jgi|Alide2_0506 note KEGG: ajs:Ajs_0473 Crp/FNR family transcriptional regulator~PFAM: Cyclic nucleotide-binding domain~SMART: Cyclic nucleotide-binding domain inference protein motif:PFAM:PF00027 db_xref InterPro:IPR000595 531481 532401 gene locus_tag Alide2_0507 531481 532401 CDS product pseudouridine synthase Rsu transl_table 11 protein_id gb|AEB82926.1||gnl|jgi|Alide2_0507 note TIGRFAM: Pseudouridine synthase, RsuA/RluB/E/F~PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4~KEGG: ajs:Ajs_0474 RNA-binding S4 domain-containing protein~SMART: RNA-binding S4 inference protein motif:TFAM:TIGR00093 db_xref GO:0003723 db_xref GO:0016866 db_xref InterPro:IPR000748 db_xref InterPro:IPR002942 db_xref InterPro:IPR006145 532499 534460 gene locus_tag Alide2_0508 532499 534460 CDS product Heat shock protein Hsp90 transl_table 11 protein_id gb|AEB82927.1||gnl|jgi|Alide2_0508 note KEGG: dia:Dtpsy_0466 heat shock protein 90~PFAM: Heat shock protein Hsp90, C-terminal; ATPase-like, ATP-binding domain~SMART: ATPase-like, ATP-binding domain inference protein motif:PFAM:PF00183 db_xref GO:0005524 db_xref InterPro:IPR003594 db_xref InterPro:IPR020576 534493 534978 gene locus_tag Alide2_0509 534493 534978 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82928.1||gnl|jgi|Alide2_0509 note KEGG: dac:Daci_1191 hypothetical protein inference similar to AA sequence:KEGG:Daci_1191 535072 536052 gene locus_tag Alide2_0510 535072 536052 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82929.1||gnl|jgi|Alide2_0510 note KEGG: dia:Dtpsy_0467 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_0467 db_xref InterPro:IPR005064 537096 536053 gene locus_tag Alide2_0511 537096 536053 CDS product aminoglycoside phosphotransferase transl_table 11 protein_id gb|AEB82930.1||gnl|jgi|Alide2_0511 note PFAM: Aminoglycoside phosphotransferase~KEGG: ajs:Ajs_0479 serine/threonine protein kinase inference protein motif:PFAM:PF01636 db_xref InterPro:IPR002575 538567 537119 gene locus_tag Alide2_0512 538567 537119 CDS product serine/threonine protein kinase transl_table 11 protein_id gb|AEB82931.1||gnl|jgi|Alide2_0512 note PFAM: Serine/threonine-protein kinase-like domain; UspA~KEGG: dia:Dtpsy_0471 serine/threonine protein kinase inference protein motif:PFAM:PF00069 db_xref GO:0004672 db_xref GO:0005524 db_xref InterPro:IPR006016 db_xref InterPro:IPR017442 539329 538571 gene locus_tag Alide2_0513 539329 538571 CDS product metallophosphoesterase transl_table 11 protein_id gb|AEB82932.1||gnl|jgi|Alide2_0513 note PFAM: Metallo-dependent phosphatase~KEGG: dia:Dtpsy_0472 metallophosphoesterase inference protein motif:PFAM:PF00149 db_xref GO:0016787 db_xref InterPro:IPR004843 539559 540755 gene locus_tag Alide2_0514 539559 540755 CDS product Formyl-CoA transferase EC_number 2.8.3.16 transl_table 11 protein_id gb|AEB82933.1||gnl|jgi|Alide2_0514 note KEGG: ajs:Ajs_0058 L-carnitine dehydratase/bile acid-inducible protein F~PFAM: CoA-transferase family III inference protein motif:PRIAM:2.8.3.16 db_xref InterPro:IPR003673 540790 541251 gene locus_tag Alide2_0515 540790 541251 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82934.1||gnl|jgi|Alide2_0515 note KEGG: ctt:CtCNB1_2196 hypothetical protein inference similar to AA sequence:KEGG:CtCNB1_2196 541372 541461 gene locus_tag Alide2_0516 pseudo 542314 541514 gene locus_tag Alide2_0517 542314 541514 CDS product 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase EC_number 4.1.3.39 transl_table 11 protein_id gb|AEB82935.1||gnl|jgi|Alide2_0517 note TIGRFAM: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase~KEGG: dia:Dtpsy_0475 2-dehydro-3-deoxyglucarate aldolase~PFAM: Aldehyde-lyase domain inference protein motif:TFAM:TIGR02311 db_xref GO:0018802 db_xref InterPro:IPR005000 db_xref InterPro:IPR012689 543144 542317 gene locus_tag Alide2_0518 543144 542317 CDS product 2-oxo-hepta-3-ene-1,7-dioic acid hydratase EC_number 4.2.1.80 transl_table 11 protein_id gb|AEB82936.1||gnl|jgi|Alide2_0518 note TIGRFAM: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase~KEGG: aav:Aave_4269 2-oxo-hepta-3-ene-1,7-dioic acid hydratase~PFAM: Fumarylacetoacetase, C-terminal-like inference protein motif:TFAM:TIGR02312 db_xref InterPro:IPR002529 db_xref InterPro:IPR012690 544010 543141 gene locus_tag Alide2_0519 544010 543141 CDS product 5-carboxymethyl-2-hydroxymuconate Delta-isomerase EC_number 5.3.3.10 transl_table 11 protein_id gb|AEB82937.1||gnl|jgi|Alide2_0519 note KEGG: aav:Aave_4268 5-carboxymethyl-2-hydroxymuconate delta-isomerase~PFAM: Fumarylacetoacetase, C-terminal-like inference protein motif:PRIAM:5.3.3.10 db_xref InterPro:IPR002529 544900 544007 gene locus_tag Alide2_0520 544900 544007 CDS product amidohydrolase 2 transl_table 11 protein_id gb|AEB82938.1||gnl|jgi|Alide2_0520 note PFAM: Amidohydrolase 2~KEGG: aav:Aave_4267 amidohydrolase 2 inference protein motif:PFAM:PF04909 db_xref GO:0003824 db_xref InterPro:IPR006992 545373 544921 gene locus_tag Alide2_0521 545373 544921 CDS product Endoribonuclease L-PSP transl_table 11 protein_id gb|AEB82939.1||gnl|jgi|Alide2_0521 note PFAM: Endoribonuclease L-PSP~KEGG: aav:Aave_4266 endoribonuclease L-PSP inference protein motif:PFAM:PF01042 db_xref InterPro:IPR006175 546311 545331 gene locus_tag Alide2_0522 546311 545331 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82940.1||gnl|jgi|Alide2_0522 note KEGG: aav:Aave_4265 hypothetical protein inference similar to AA sequence:KEGG:Aave_4265 db_xref InterPro:IPR005064 546516 547154 gene locus_tag Alide2_0523 546516 547154 CDS product flavin reductase domain protein FMN-binding protein transl_table 11 protein_id gb|AEB82941.1||gnl|jgi|Alide2_0523 note KEGG: aav:Aave_4263 flavin reductase domain-containing protein~PFAM: Flavin reductase-like, FMN-binding~SMART: Flavin reductase-like, FMN-binding inference protein motif:PFAM:PF01613 db_xref InterPro:IPR002563 547151 547939 gene locus_tag Alide2_0524 547151 547939 CDS product transcriptional regulator, IclR family transl_table 11 protein_id gb|AEB82942.1||gnl|jgi|Alide2_0524 note KEGG: aav:Aave_4262 IclR family transcriptional regulator~PFAM: Transcription regulator IclR, N-terminal; Transcription regulator IclR, C-terminal~SMART: Transcription regulator IclR, N-terminal inference protein motif:PFAM:PF09339 db_xref GO:0003677 db_xref InterPro:IPR005471 db_xref InterPro:IPR014757 548795 547947 gene locus_tag Alide2_0525 548795 547947 CDS product 3-hydroxybutyryl-CoA dehydrogenase EC_number 1.1.1.157 transl_table 11 protein_id gb|AEB82943.1||gnl|jgi|Alide2_0525 note KEGG: ajs:Ajs_3718 3-hydroxybutyryl-CoA dehydrogenase~PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal inference protein motif:PRIAM:1.1.1.157 db_xref InterPro:IPR006108 db_xref InterPro:IPR006176 548895 550487 gene locus_tag Alide2_0526 548895 550487 CDS product Choline dehydrogenase EC_number 1.1.99.1 transl_table 11 protein_id gb|AEB82944.1||gnl|jgi|Alide2_0526 note KEGG: dia:Dtpsy_0477 choline dehydrogenase~PFAM: Glucose-methanol-choline oxidoreductase, N-terminal; Glucose-methanol-choline oxidoreductase, C-terminal inference protein motif:PRIAM:1.1.99.1 db_xref InterPro:IPR000172 db_xref InterPro:IPR007867 550604 550873 gene locus_tag Alide2_0527 pseudo 551172 550867 gene locus_tag Alide2_0528 pseudo 552017 551199 gene locus_tag Alide2_0529 552017 551199 CDS product ABC-2 type transporter, NodJ family transl_table 11 protein_id gb|AEB82945.1||gnl|jgi|Alide2_0529 note KEGG: ajs:Ajs_3712 ABC transporter~TIGRFAM: ABC-2 type transporter, NodJ~PFAM: ABC-2 type transporter inference protein motif:TFAM:TIGR01291 db_xref GO:0005215 db_xref InterPro:IPR005981 db_xref InterPro:IPR013525 552960 552019 gene locus_tag Alide2_0530 552960 552019 CDS product Fe(3+)-transporting ATPase EC_number 3.6.3.30 transl_table 11 protein_id gb|AEB82946.1||gnl|jgi|Alide2_0530 note PFAM: ABC transporter-like~KEGG: ajs:Ajs_3711 ABC transporter related~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.30 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 554777 553065 gene locus_tag Alide2_0531 554777 553065 CDS product Tannase and feruloyl esterase transl_table 11 protein_id gb|AEB82947.1||gnl|jgi|Alide2_0531 note PFAM: Tannase/feruloyl esterase~KEGG: reu:Reut_A1509 tannase and feruloyl esterase inference protein motif:PFAM:PF07519 db_xref InterPro:IPR011118 556403 554919 gene locus_tag Alide2_0532 556403 554919 CDS product AMP nucleosidase EC_number 3.2.2.4 transl_table 11 protein_id gb|AEB82948.1||gnl|jgi|Alide2_0532 note TIGRFAM: AMP nucleosidase~KEGG: aav:Aave_4246 AMP nucleosidase~PFAM: AMP nucleoside phosphorylase, N-terminal; Nucleoside phosphorylase domain inference protein motif:TFAM:TIGR01717 db_xref InterPro:IPR000845 db_xref InterPro:IPR011271 db_xref InterPro:IPR018953 558535 556439 gene locus_tag Alide2_0533 558535 556439 CDS product diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) transl_table 11 protein_id gb|AEB82949.1||gnl|jgi|Alide2_0533 note TIGRFAM: Diguanylate cyclase, predicted; PAS~PFAM: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS fold-4; PAS fold-3~KEGG: dia:Dtpsy_0486 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)~SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS inference protein motif:TFAM:TIGR00254 db_xref GO:0004871 db_xref InterPro:IPR000014 db_xref InterPro:IPR000160 db_xref InterPro:IPR001633 db_xref InterPro:IPR013655 db_xref InterPro:IPR013656 558599 559591 gene locus_tag Alide2_0534 558599 559591 CDS product cation diffusion facilitator family transporter transl_table 11 protein_id gb|AEB82950.1||gnl|jgi|Alide2_0534 note KEGG: ajs:Ajs_3707 cation diffusion facilitator family transporter~TIGRFAM: Cation efflux protein~PFAM: Cation efflux protein inference protein motif:TFAM:TIGR01297 db_xref GO:0008324 db_xref InterPro:IPR002524 559588 560031 gene locus_tag Alide2_0535 559588 560031 CDS product D-tyrosyl-tRNA(Tyr) deacylase transl_table 11 protein_id gb|AEB82951.1||gnl|jgi|Alide2_0535 note TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase~HAMAP: D-tyrosyl-tRNA(Tyr) deacylase~KEGG: dia:Dtpsy_0488 D-tyrosyl-tRNA(Tyr) deacylase~PFAM: D-tyrosyl-tRNA(Tyr) deacylase inference protein motif:HAMAP:MF_00518 db_xref InterPro:IPR003732 560843 560097 gene locus_tag Alide2_0536 560843 560097 CDS product protein of unknown function DUF81 transl_table 11 protein_id gb|AEB82952.1||gnl|jgi|Alide2_0536 note PFAM: Protein of unknown function DUF81~KEGG: dia:Dtpsy_0490 protein of unknown function DUF81 inference protein motif:PFAM:PF01925 db_xref InterPro:IPR002781 561956 561009 gene locus_tag Alide2_0537 561956 561009 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB82953.1||gnl|jgi|Alide2_0537 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: dac:Daci_1220 LysR family transcriptional regulator inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 562061 563032 gene locus_tag Alide2_0538 562061 563032 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82954.1||gnl|jgi|Alide2_0538 note KEGG: dac:Daci_1221 hypothetical protein inference similar to AA sequence:KEGG:Daci_1221 db_xref InterPro:IPR005064 563052 564302 gene locus_tag Alide2_0539 563052 564302 CDS product Formyl-CoA transferase EC_number 2.8.3.16 transl_table 11 protein_id gb|AEB82955.1||gnl|jgi|Alide2_0539 note KEGG: dac:Daci_1222 L-carnitine dehydratase/bile acid-inducible protein F~PFAM: CoA-transferase family III inference protein motif:PRIAM:2.8.3.16 db_xref InterPro:IPR003673 564335 565321 gene locus_tag Alide2_0540 564335 565321 CDS product quinone oxidoreductase, YhdH/YhfP family transl_table 11 protein_id gb|AEB82956.1||gnl|jgi|Alide2_0540 note KEGG: dac:Daci_1223 quinone oxidoreductase~TIGRFAM: Quinone oxidoreductase putative, YhdH/YhfP~PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like inference protein motif:TFAM:TIGR02823 db_xref InterPro:IPR013149 db_xref InterPro:IPR013154 db_xref InterPro:IPR014188 565377 566936 gene locus_tag Alide2_0541 565377 566936 CDS product o-succinylbenzoate--CoA ligase EC_number 6.2.1.26 transl_table 11 protein_id gb|AEB82957.1||gnl|jgi|Alide2_0541 note KEGG: reh:H16_B1709 acyl-CoA synthetase~PFAM: AMP-dependent synthetase/ligase inference protein motif:PRIAM:6.2.1.26 db_xref InterPro:IPR000873 567405 566953 gene locus_tag Alide2_0542 567405 566953 CDS product metalloprotease ybeY transl_table 11 protein_id gb|AEB82958.1||gnl|jgi|Alide2_0542 note TIGRFAM: Uncharacterised protein family UPF0054, metalloprotease YbeY, predicted~HAMAP: Uncharacterised protein family UPF0054, metalloprotease YbeY, predicted~KEGG: ajs:Ajs_3702 hypothetical protein~PFAM: Uncharacterised protein family UPF0054, metalloprotease YbeY, predicted inference protein motif:HAMAP:MF_00009 db_xref InterPro:IPR002036 568407 567457 gene locus_tag Alide2_0543 568407 567457 CDS product PhoH family protein transl_table 11 protein_id gb|AEB82959.1||gnl|jgi|Alide2_0543 note PFAM: PhoH-like protein~KEGG: dia:Dtpsy_0492 PhoH family protein inference protein motif:PFAM:PF02562 db_xref GO:0005524 db_xref InterPro:IPR003714 568455 569027 gene locus_tag Alide2_0544 568455 569027 CDS product Holliday junction DNA helicase RuvA transl_table 11 protein_id gb|AEB82960.1||gnl|jgi|Alide2_0544 note TIGRFAM: Bacterial DNA recombination protein RuvA~PFAM: DNA helicase, Holliday junction RuvA type, domain I, bacterial; DNA helicase, Holliday junction RuvA type, domain III, C-terminal~KEGG: dia:Dtpsy_0493 Holliday junction DNA helicase RuvA~SMART: Helix-hairpin-helix DNA-binding motif, class 1 inference protein motif:TFAM:TIGR00084 db_xref GO:0003678 db_xref InterPro:IPR000085 db_xref InterPro:IPR003583 db_xref InterPro:IPR011114 db_xref InterPro:IPR013849 569065 570546 gene locus_tag Alide2_0545 569065 570546 CDS product endoproteinase Arg-C transl_table 11 protein_id gb|AEB82961.1||gnl|jgi|Alide2_0545 note KEGG: dia:Dtpsy_0494 endoproteinase Arg-C inference similar to AA sequence:KEGG:Dtpsy_0494 573364 570560 gene locus_tag Alide2_0546 573364 570560 CDS product DnaK-related protein transl_table 11 protein_id gb|AEB82962.1||gnl|jgi|Alide2_0546 note KEGG: ajs:Ajs_3698 DnaK-related protein inference similar to AA sequence:KEGG:Ajs_3698 575253 573361 gene locus_tag Alide2_0547 575253 573361 CDS product putative heat-shock chaperone protein transl_table 11 protein_id gb|AEB82963.1||gnl|jgi|Alide2_0547 note KEGG: dac:Daci_5720 putative heat-shock chaperone protein inference similar to AA sequence:KEGG:Daci_5720 575855 575250 gene locus_tag Alide2_0548 575855 575250 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82964.1||gnl|jgi|Alide2_0548 note KEGG: dac:Daci_5721 hypothetical protein inference similar to AA sequence:KEGG:Daci_5721 575913 577040 gene locus_tag Alide2_0549 575913 577040 CDS product Holliday junction ATP-dependent DNA helicase ruvB transl_table 11 protein_id gb|AEB82965.1||gnl|jgi|Alide2_0549 note SMART: ATPase, AAA+ type, core~TIGRFAM: DNA helicase, Holliday junction RuvB type~KEGG: dia:Dtpsy_0499 Holliday junction DNA helicase RuvB~HAMAP: DNA helicase, Holliday junction RuvB type~PFAM: DNA helicase, Holliday junction RuvB type, C-terminal; ATPase, AAA-type, core; DNA helicase, Holliday junction RuvB type, N-terminal inference protein motif:HAMAP:MF_00016 db_xref InterPro:IPR003593 db_xref InterPro:IPR003959 db_xref InterPro:IPR004605 db_xref InterPro:IPR008823 db_xref InterPro:IPR008824 577772 577050 gene locus_tag Alide2_0550 577772 577050 CDS product MgtC/SapB transporter transl_table 11 protein_id gb|AEB82966.1||gnl|jgi|Alide2_0550 note PFAM: MgtC/SapB transporter~KEGG: dac:Daci_1228 MgtC/SapB transporter inference protein motif:PFAM:PF02308 db_xref InterPro:IPR003416 578178 577828 gene locus_tag Alide2_0551 578178 577828 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82967.1||gnl|jgi|Alide2_0551 inference ab initio prediction:Prodigal:1.4 578480 578286 gene locus_tag Alide2_0552 578480 578286 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82968.1||gnl|jgi|Alide2_0552 note KEGG: ctt:CtCNB1_4283 hypothetical protein inference similar to AA sequence:KEGG:CtCNB1_4283 579987 578824 gene locus_tag Alide2_0553 579987 578824 CDS product alanine racemase domain protein transl_table 11 protein_id gb|AEB82969.1||gnl|jgi|Alide2_0553 note PFAM: Alanine racemase, N-terminal~KEGG: dia:Dtpsy_0501 alanine racemase domain protein inference protein motif:PFAM:PF01168 db_xref InterPro:IPR001608 580618 579971 gene locus_tag Alide2_0554 580618 579971 CDS product Phosphoglycerate mutase transl_table 11 protein_id gb|AEB82970.1||gnl|jgi|Alide2_0554 note KEGG: dia:Dtpsy_0502 phosphoglycerate mutase~PFAM: Histidine phosphatase superfamily, clade-1~SMART: Histidine phosphatase superfamily, clade-1 inference protein motif:PFAM:PF00300 db_xref InterPro:IPR013078 581240 580626 gene locus_tag Alide2_0555 581240 580626 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82971.1||gnl|jgi|Alide2_0555 note KEGG: dia:Dtpsy_0504 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_0504 582346 581414 gene locus_tag Alide2_0556 582346 581414 CDS product tRNA 2-thiocytidine biosynthesis protein TtcA transl_table 11 protein_id gb|AEB82972.1||gnl|jgi|Alide2_0556 note KEGG: dia:Dtpsy_0505 PP-loop domain protein~HAMAP: 2-thiocytidine tRNA biosynthesis protein, TtcA~PFAM: tRNA(Ile)-lysidine/2-thiocytidine synthase inference protein motif:HAMAP:MF_01850 db_xref InterPro:IPR011063 db_xref InterPro:IPR012089 582743 582351 gene locus_tag Alide2_0557 582743 582351 CDS product dihydroneopterin aldolase transl_table 11 protein_id gb|AEB82973.1||gnl|jgi|Alide2_0557 note TIGRFAM: Dihydroneopterin aldolase~PFAM: Dihydroneopterin aldolase~KEGG: dia:Dtpsy_0506 dihydroneopterin aldolase~SMART: Dihydroneopterin aldolase inference protein motif:TFAM:TIGR00526 db_xref GO:0004150 db_xref InterPro:IPR006157 583161 582748 gene locus_tag Alide2_0558 583161 582748 CDS product dihydroneopterin aldolase transl_table 11 protein_id gb|AEB82974.1||gnl|jgi|Alide2_0558 note KEGG: dia:Dtpsy_0507 dihydroneopterin aldolase~PFAM: Dihydroneopterin aldolase~SMART: Dihydroneopterin aldolase inference protein motif:PFAM:PF02152 db_xref GO:0004150 db_xref InterPro:IPR006157 583964 583158 gene locus_tag Alide2_0559 583964 583158 CDS product short-chain dehydrogenase/reductase SDR transl_table 11 protein_id gb|AEB82975.1||gnl|jgi|Alide2_0559 note PFAM: Short-chain dehydrogenase/reductase SDR~KEGG: bge:BC1002_2951 short-chain dehydrogenase/reductase SDR inference protein motif:PFAM:PF00106 db_xref GO:0016491 db_xref InterPro:IPR002198 584103 585188 gene locus_tag Alide2_0560 584103 585188 CDS product protein of unknown function DUF185 transl_table 11 protein_id gb|AEB82976.1||gnl|jgi|Alide2_0560 note PFAM: Protein of unknown function DUF185~KEGG: dia:Dtpsy_0510 protein of unknown function DUF185 inference protein motif:PFAM:PF02636 db_xref InterPro:IPR003788 585215 585619 gene locus_tag Alide2_0561 585215 585619 CDS product Glyoxalase/bleomycin resistance protein/dioxygenase transl_table 11 protein_id gb|AEB82977.1||gnl|jgi|Alide2_0561 note PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase~KEGG: rme:Rmet_4030 hypothetical protein inference protein motif:PFAM:PF00903 db_xref InterPro:IPR004360 585623 585817 gene locus_tag Alide2_0562 585623 585817 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82978.1||gnl|jgi|Alide2_0562 note KEGG: dia:Dtpsy_0515 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_0515 585960 586919 gene locus_tag Alide2_0563 585960 586919 CDS product ROK family protein transl_table 11 protein_id gb|AEB82979.1||gnl|jgi|Alide2_0563 note PFAM: ROK~KEGG: ajs:Ajs_0500 glucokinase inference protein motif:PFAM:PF00480 db_xref InterPro:IPR000600 588271 586880 gene locus_tag Alide2_0564 588271 586880 CDS product Alpha,alpha-trehalose-phosphate synthase (UDP-forming) EC_number 2.4.1.15 transl_table 11 protein_id gb|AEB82980.1||gnl|jgi|Alide2_0564 note KEGG: ajs:Ajs_0501 alpha,alpha-trehalose-phosphate synthase (UDP-forming)~PFAM: Glycosyl transferase, family 20 inference protein motif:PRIAM:2.4.1.15 db_xref InterPro:IPR001830 590070 588268 gene locus_tag Alide2_0565 590070 588268 CDS product glycoside hydrolase 15-related protein transl_table 11 protein_id gb|AEB82981.1||gnl|jgi|Alide2_0565 note PFAM: Glycoside hydrolase 15-related~KEGG: ajs:Ajs_0502 glycoside hydrolase 15-related inference protein motif:PFAM:PF00723 db_xref GO:0004339 db_xref InterPro:IPR011613 590831 590076 gene locus_tag Alide2_0566 590831 590076 CDS product trehalose-phosphatase transl_table 11 protein_id gb|AEB82982.1||gnl|jgi|Alide2_0566 note KEGG: dia:Dtpsy_0519 trehalose-phosphatase~TIGRFAM: Trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB~PFAM: Trehalose-phosphatase inference protein motif:TFAM:TIGR00685 db_xref GO:0003824 db_xref InterPro:IPR003337 db_xref InterPro:IPR006379 590974 591420 gene locus_tag Alide2_0567 590974 591420 CDS product thioredoxin EC_number 1.8.1.8 transl_table 11 protein_id gb|AEB82983.1||gnl|jgi|Alide2_0567 note TIGRFAM: Thioredoxin; Zinc finger/thioredoxin putative~KEGG: dia:Dtpsy_0520 thioredoxin~PFAM: Thioredoxin domain inference protein motif:TFAM:TIGR01068 db_xref GO:0009055 db_xref GO:0015035 db_xref InterPro:IPR005746 db_xref InterPro:IPR011723 db_xref InterPro:IPR013766 592656 591409 gene locus_tag Alide2_0568 592656 591409 CDS product polynucleotide adenylyltransferase/metal dependent phosphohydrolase EC_number 2.7.7.72 transl_table 11 protein_id gb|AEB82984.1||gnl|jgi|Alide2_0568 note HAMAP: tRNA nucleotidyltransferase, proteobacteria~KEGG: dia:Dtpsy_0521 polynucleotide adenylyltransferase/metal dependent phosphohydrolase~PFAM: Poly A polymerase, head domain; Metal-dependent phosphohydrolase, HD subdomain inference protein motif:HAMAP:MF_01261 db_xref InterPro:IPR002646 db_xref InterPro:IPR006674 db_xref InterPro:IPR012006 592723 593706 gene locus_tag Alide2_0569 592723 593706 CDS product sigma54 specific transcriptional regulator, Fis family transl_table 11 protein_id gb|AEB82985.1||gnl|jgi|Alide2_0569 note KEGG: axy:AXYL_01756 acetoacetate metabolism regulatory protein AtoC~PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type~SMART: ATPase, AAA+ type, core inference protein motif:PFAM:PF00158 db_xref GO:0003700 db_xref GO:0005524 db_xref GO:0008134 db_xref InterPro:IPR002078 db_xref InterPro:IPR002197 db_xref InterPro:IPR003593 593891 595252 gene locus_tag Alide2_0570 593891 595252 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82986.1||gnl|jgi|Alide2_0570 note KEGG: vei:Veis_3993 hypothetical protein inference similar to AA sequence:KEGG:Veis_3993 595267 595587 gene locus_tag Alide2_0571 595267 595587 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82987.1||gnl|jgi|Alide2_0571 note KEGG: axy:AXYL_01758 hypothetical protein inference similar to AA sequence:KEGG:AXYL_01758 595625 596596 gene locus_tag Alide2_0572 595625 596596 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82988.1||gnl|jgi|Alide2_0572 note KEGG: vei:Veis_3991 hypothetical protein inference similar to AA sequence:KEGG:Veis_3991 db_xref InterPro:IPR005064 597368 596598 gene locus_tag Alide2_0573 597368 596598 CDS product metallophosphoesterase transl_table 11 protein_id gb|AEB82989.1||gnl|jgi|Alide2_0573 note PFAM: Metallo-dependent phosphatase~KEGG: dia:Dtpsy_0522 metallophosphoesterase inference protein motif:PFAM:PF00149 db_xref GO:0016787 db_xref InterPro:IPR004843 598073 597387 gene locus_tag Alide2_0574 598073 597387 CDS product Glutathione S-transferase domain protein transl_table 11 protein_id gb|AEB82990.1||gnl|jgi|Alide2_0574 note PFAM: Glutathione S-transferase, N-terminal~KEGG: ajs:Ajs_0507 glutathione S-transferase domain-containing protein inference protein motif:PFAM:PF02798 db_xref InterPro:IPR004045 598734 598162 gene locus_tag Alide2_0575 598734 598162 CDS product 5-formyltetrahydrofolate cyclo-ligase transl_table 11 protein_id gb|AEB82991.1||gnl|jgi|Alide2_0575 note KEGG: dia:Dtpsy_0524 5-formyltetrahydrofolate cyclo-ligase~TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase~PFAM: 5-formyltetrahydrofolate cyclo-ligase inference protein motif:TFAM:TIGR02727 db_xref GO:0005524 db_xref GO:0030272 db_xref InterPro:IPR002698 598749 600731 gene locus_tag Alide2_0576 598749 600731 CDS product Lytic transglycosylase catalytic transl_table 11 protein_id gb|AEB82992.1||gnl|jgi|Alide2_0576 note PFAM: Lytic transglycosylase-like, catalytic~KEGG: dia:Dtpsy_0525 lytic transglycosylase catalytic inference protein motif:PFAM:PF01464 db_xref InterPro:IPR008258 601321 600794 gene locus_tag Alide2_0577 601321 600794 CDS product cytochrome b561 transl_table 11 protein_id gb|AEB82993.1||gnl|jgi|Alide2_0577 note KEGG: ajs:Ajs_0510 cytochrome b561 inference similar to AA sequence:KEGG:Ajs_0510 db_xref InterPro:IPR011577 601593 601321 gene locus_tag Alide2_0578 601593 601321 CDS product hypothetical protein transl_table 11 protein_id gb|AEB82994.1||gnl|jgi|Alide2_0578 note KEGG: dia:Dtpsy_0527 putative signal peptide protein inference similar to AA sequence:KEGG:Dtpsy_0527 602413 601730 gene locus_tag Alide2_0579 602413 601730 CDS product PKHD-type hydroxylase ybiX transl_table 11 protein_id gb|AEB82995.1||gnl|jgi|Alide2_0579 note HAMAP: PKHD-type hydroxylase ybiX~PFAM: Oxoglutarate/iron-dependent oxygenase~KEGG: ajs:Ajs_0512 putative hydroxylase~SMART: Prolyl 4-hydroxylase, alpha subunit inference protein motif:HAMAP:MF_00657 db_xref InterPro:IPR005123 db_xref InterPro:IPR006620 603504 602407 gene locus_tag Alide2_0580 603504 602407 CDS product (S)-2-hydroxy-acid oxidase EC_number 1.1.3.15 transl_table 11 protein_id gb|AEB82996.1||gnl|jgi|Alide2_0580 note KEGG: ajs:Ajs_0513 (S)-2-hydroxy-acid oxidase~PFAM: FMN-dependent dehydrogenase inference protein motif:PRIAM:1.1.3.15 db_xref InterPro:IPR000262 605846 603558 gene locus_tag Alide2_0581 605846 603558 CDS product TonB-dependent receptor transl_table 11 protein_id gb|AEB82997.1||gnl|jgi|Alide2_0581 note PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug~KEGG: ajs:Ajs_0514 TonB-dependent receptor inference protein motif:PFAM:PF00593 db_xref GO:0004872 db_xref GO:0005215 db_xref InterPro:IPR000531 db_xref InterPro:IPR012910 606927 606001 gene locus_tag Alide2_0582 606927 606001 CDS product beta-lactamase domain protein transl_table 11 protein_id gb|AEB82998.1||gnl|jgi|Alide2_0582 note KEGG: ajs:Ajs_0515 beta-lactamase domain-containing protein~PFAM: Beta-lactamase-like~SMART: Beta-lactamase-like inference protein motif:PFAM:PF00753 db_xref GO:0016787 db_xref InterPro:IPR001279 608631 606946 gene locus_tag Alide2_0583 608631 606946 CDS product Long-chain-fatty-acid--CoA ligase EC_number 6.2.1.3 transl_table 11 protein_id gb|AEB82999.1||gnl|jgi|Alide2_0583 note KEGG: ajs:Ajs_0516 AMP-dependent synthetase and ligase~PFAM: AMP-dependent synthetase/ligase inference protein motif:PRIAM:6.2.1.3 db_xref InterPro:IPR000873 608754 609656 gene locus_tag Alide2_0584 608754 609656 CDS product PGAP1 family protein transl_table 11 protein_id gb|AEB83000.1||gnl|jgi|Alide2_0584 note KEGG: dia:Dtpsy_0533 PGAP1 family protein inference similar to AA sequence:KEGG:Dtpsy_0533 db_xref InterPro:IPR012908 610976 609759 gene locus_tag Alide2_0585 610976 609759 CDS product Beta-ketoacyl-acyl-carrier-protein synthase I EC_number 2.3.1.41 transl_table 11 protein_id gb|AEB83001.1||gnl|jgi|Alide2_0585 note PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal~KEGG: dia:Dtpsy_0542 beta-ketoacyl synthase~SMART: Polyketide synthase, beta-ketoacyl synthase domain inference protein motif:PRIAM:2.3.1.41 db_xref InterPro:IPR014030 db_xref InterPro:IPR014031 db_xref InterPro:IPR020841 611497 610991 gene locus_tag Alide2_0586 611497 610991 CDS product beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA EC_number 4.2.1.60 transl_table 11 protein_id gb|AEB83002.1||gnl|jgi|Alide2_0586 note TIGRFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA~KEGG: dia:Dtpsy_0541 3-hydroxydecanoyl-(acyl carrier protein) dehydratase~PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ inference protein motif:TFAM:TIGR01749 db_xref GO:0008693 db_xref InterPro:IPR010083 db_xref InterPro:IPR013114 613175 611586 gene locus_tag Alide2_0587 613175 611586 CDS product apolipoprotein N-acyltransferase transl_table 11 protein_id gb|AEB83003.1||gnl|jgi|Alide2_0587 note KEGG: ajs:Ajs_0524 apolipoprotein N-acyltransferase~TIGRFAM: Apolipoprotein N-acyltransferase~PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase inference protein motif:TFAM:TIGR00546 db_xref GO:0016410 db_xref InterPro:IPR003010 db_xref InterPro:IPR004563 614062 613175 gene locus_tag Alide2_0588 614062 613175 CDS product CBS domain containing protein transl_table 11 protein_id gb|AEB83004.1||gnl|jgi|Alide2_0588 note PFAM: Cystathionine beta-synthase, core; Transporter-associated domain~KEGG: ajs:Ajs_0523 CBS domain-containing protein inference protein motif:PFAM:PF00571 db_xref InterPro:IPR000644 db_xref InterPro:IPR005170 614874 614173 gene locus_tag Alide2_0589 614874 614173 CDS product GCN5-related N-acetyltransferase transl_table 11 protein_id gb|AEB83005.1||gnl|jgi|Alide2_0589 note KEGG: ajs:Ajs_0522 GCN5-related N-acetyltransferase~manually curated~PFAM: GCN5-related N-acetyltransferase (GNAT) domain inference protein motif:PFAM:PF00583 db_xref GO:0008080 db_xref InterPro:IPR000182 615510 615025 gene locus_tag Alide2_0590 615510 615025 CDS product transcriptional regulator, AsnC family transl_table 11 protein_id gb|AEB83006.1||gnl|jgi|Alide2_0590 note KEGG: dia:Dtpsy_0537 transcriptional regulator, AsnC family~PFAM: Transcription regulator AsnC-type, C-terminal~SMART: Transcription regulator AsnC-type inference protein motif:PFAM:PF01037 db_xref GO:0003700 db_xref GO:0043565 db_xref InterPro:IPR019887 db_xref InterPro:IPR019888 615670 616791 gene locus_tag Alide2_0591 615670 616791 CDS product 4-hydroxyphenylpyruvate dioxygenase EC_number 1.13.11.27 transl_table 11 protein_id gb|AEB83007.1||gnl|jgi|Alide2_0591 note TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase~KEGG: ajs:Ajs_0520 4-hydroxyphenylpyruvate dioxygenase~PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase inference protein motif:TFAM:TIGR01263 db_xref GO:0003868 db_xref InterPro:IPR004360 db_xref InterPro:IPR005956 616793 617617 gene locus_tag Alide2_0592 616793 617617 CDS product phenylalanine-4-hydroxylase EC_number 1.14.16.1 transl_table 11 protein_id gb|AEB83008.1||gnl|jgi|Alide2_0592 note TIGRFAM: Phenylalanine-4-hydroxylase, monomeric form~KEGG: dia:Dtpsy_0534 phenylalanine 4-monooxygenase~PFAM: Aromatic amino acid hydroxylase, C-terminal inference protein motif:TFAM:TIGR01267 db_xref GO:0004505 db_xref InterPro:IPR005960 db_xref InterPro:IPR019774 617758 618993 gene locus_tag Alide2_0593 617758 618993 CDS product 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) EC_number 1.2.4.4 transl_table 11 protein_id gb|AEB83009.1||gnl|jgi|Alide2_0593 note KEGG: pol:Bpro_0273 branched-chain alpha-keto acid dehydrogenase E1 component~PFAM: Dehydrogenase, E1 component; 2-oxoisovalerate dehydrogenase, E1 alpha subunit, N-terminal inference protein motif:PRIAM:1.2.4.4 db_xref InterPro:IPR001017 db_xref InterPro:IPR022593 619033 620037 gene locus_tag Alide2_0594 619033 620037 CDS product 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) EC_number 1.2.4.4 transl_table 11 protein_id gb|AEB83010.1||gnl|jgi|Alide2_0594 note PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal~KEGG: pol:Bpro_0274 branched-chain alpha-keto acid dehydrogenase E1 component~SMART: Transketolase-like, pyrimidine-binding domain inference protein motif:PRIAM:1.2.4.4 db_xref InterPro:IPR005475 db_xref InterPro:IPR005476 620039 621346 gene locus_tag Alide2_0595 620039 621346 CDS product Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase EC_number 2.3.1.168 transl_table 11 protein_id gb|AEB83011.1||gnl|jgi|Alide2_0595 note KEGG: axy:AXYL_02631 lipoamide acyltransferase component of branched-chain alpha-keto aciddehydrogenase complex~PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding inference protein motif:PRIAM:2.3.1.168 db_xref InterPro:IPR000089 db_xref InterPro:IPR001078 db_xref InterPro:IPR004167 621354 622751 gene locus_tag Alide2_0596 621354 622751 CDS product dihydrolipoamide dehydrogenase EC_number 1.8.1.4 transl_table 11 protein_id gb|AEB83012.1||gnl|jgi|Alide2_0596 note TIGRFAM: Dihydrolipoamide dehydrogenase~KEGG: axy:AXYL_02632 dihydrolipoyl dehydrogenase 2~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region inference protein motif:TFAM:TIGR01350 db_xref GO:0004148 db_xref GO:0050660 db_xref InterPro:IPR001327 db_xref InterPro:IPR004099 db_xref InterPro:IPR006258 db_xref InterPro:IPR013027 622856 623794 gene locus_tag Alide2_0597 622856 623794 CDS product glycyl-tRNA synthetase, alpha subunit EC_number 6.1.1.14 transl_table 11 protein_id gb|AEB83013.1||gnl|jgi|Alide2_0597 note TIGRFAM: Glycyl-tRNA synthetase, class IIc, alpha subunit~KEGG: dac:Daci_1288 glycyl-tRNA synthetase subunit alpha~PFAM: Glycyl-tRNA synthetase, class IIc, alpha subunit inference protein motif:TFAM:TIGR00388 db_xref GO:0000166 db_xref GO:0004820 db_xref GO:0005524 db_xref InterPro:IPR002310 623814 625979 gene locus_tag Alide2_0598 623814 625979 CDS product Glycyl-tRNA synthetase beta subunit EC_number 6.1.1.14 transl_table 11 protein_id gb|AEB83014.1||gnl|jgi|Alide2_0598 note TIGRFAM: Glycyl-tRNA synthetase, class IIc, beta subunit~HAMAP: Glycyl-tRNA synthetase, class IIc, beta subunit~KEGG: ajs:Ajs_0528 glycine--tRNA ligase inference protein motif:HAMAP:MF_00255 db_xref InterPro:IPR002311 db_xref InterPro:IPR008909 db_xref InterPro:IPR015944 626025 626600 gene locus_tag Alide2_0599 626025 626600 CDS product histidinol-phosphate phosphatase family protein transl_table 11 protein_id gb|AEB83015.1||gnl|jgi|Alide2_0599 note TIGRFAM: Histidinol-phosphate phosphatase; HAD-superfamily hydrolase, subfamily IIIA~KEGG: dia:Dtpsy_0545 histidinol-phosphate phosphatase family protein inference protein motif:TFAM:TIGR01656 db_xref GO:0016791 db_xref InterPro:IPR006543 db_xref InterPro:IPR006549 db_xref InterPro:IPR013954 626851 627594 gene locus_tag Alide2_0600 626851 627594 CDS product phospholipid/glycerol acyltransferase transl_table 11 protein_id gb|AEB83016.1||gnl|jgi|Alide2_0600 note KEGG: ajs:Ajs_0530 phospholipid/glycerol acyltransferase~PFAM: Phospholipid/glycerol acyltransferase~SMART: Phospholipid/glycerol acyltransferase inference protein motif:PFAM:PF01553 db_xref GO:0008415 db_xref InterPro:IPR002123 627597 628400 gene locus_tag Alide2_0601 627597 628400 CDS product protein of unknown function DUF45 transl_table 11 protein_id gb|AEB83017.1||gnl|jgi|Alide2_0601 note PFAM: Protein of unknown function DUF45~KEGG: dia:Dtpsy_0547 protein of unknown function DUF45 inference protein motif:PFAM:PF01863 db_xref InterPro:IPR002725 628461 628895 gene locus_tag Alide2_0602 628461 628895 CDS product Rhodanese-like protein transl_table 11 protein_id gb|AEB83018.1||gnl|jgi|Alide2_0602 note SMART: Rhodanese-like~KEGG: ajs:Ajs_0532 rhodanese domain-containing protein inference protein motif:SMART:SM00450 db_xref InterPro:IPR001763 629388 628900 gene locus_tag Alide2_0603 629388 628900 CDS product transport-associated protein transl_table 11 protein_id gb|AEB83019.1||gnl|jgi|Alide2_0603 note KEGG: ajs:Ajs_0533 peptidoglycan-binding LysM~PFAM: Transport-associated; Peptidoglycan-binding lysin domain~SMART: Peptidoglycan-binding Lysin subgroup inference protein motif:PFAM:PF04972 db_xref InterPro:IPR002482 db_xref InterPro:IPR007055 db_xref InterPro:IPR018392 629535 630311 gene locus_tag Alide2_0604 629535 630311 CDS product putative transcriptional acitvator, Baf family transl_table 11 protein_id gb|AEB83020.1||gnl|jgi|Alide2_0604 note KEGG: dia:Dtpsy_0550 pantothenate kinase~TIGRFAM: Type III pantothenate kinase~PFAM: Type III pantothenate kinase inference protein motif:TFAM:TIGR00671 db_xref GO:0016563 db_xref InterPro:IPR004619 630985 630308 gene locus_tag Alide2_0605 630985 630308 CDS product regulatory protein TetR transl_table 11 protein_id gb|AEB83021.1||gnl|jgi|Alide2_0605 note PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal~KEGG: dia:Dtpsy_0551 transcriptional regulator, TetR family inference protein motif:PFAM:PF00440 db_xref GO:0003700 db_xref InterPro:IPR001647 631586 631143 gene locus_tag Alide2_0606 631586 631143 CDS product poly(hydroxyalkanoate) granule-associated protein transl_table 11 protein_id gb|AEB83022.1||gnl|jgi|Alide2_0606 note KEGG: dia:Dtpsy_0552 poly(hydroxyalkanoate) granule-associated protein~TIGRFAM: Poly granule associated~PFAM: Poly granule associated inference protein motif:TFAM:TIGR01837 db_xref InterPro:IPR008769 631785 632846 gene locus_tag Alide2_0607 631785 632846 CDS product dTDP-glucose 4,6-dehydratase EC_number 4.2.1.46 transl_table 11 protein_id gb|AEB83023.1||gnl|jgi|Alide2_0607 note TIGRFAM: dTDP-glucose 4,6-dehydratase~KEGG: ajs:Ajs_0537 dTDP-glucose 4,6-dehydratase~PFAM: NAD-dependent epimerase/dehydratase inference protein motif:TFAM:TIGR01181 db_xref GO:0008460 db_xref InterPro:IPR001509 db_xref InterPro:IPR005888 632843 633721 gene locus_tag Alide2_0608 632843 633721 CDS product dTDP-4-dehydrorhamnose reductase EC_number 1.1.1.133 transl_table 11 protein_id gb|AEB83024.1||gnl|jgi|Alide2_0608 note TIGRFAM: dTDP-4-dehydrorhamnose reductase~KEGG: ajs:Ajs_0538 dTDP-4-dehydrorhamnose reductase~PFAM: dTDP-4-dehydrorhamnose reductase inference protein motif:TFAM:TIGR01214 db_xref GO:0008831 db_xref InterPro:IPR005913 633732 634622 gene locus_tag Alide2_0609 633732 634622 CDS product glucose-1-phosphate thymidylyltransferase EC_number 2.7.7.24 transl_table 11 protein_id gb|AEB83025.1||gnl|jgi|Alide2_0609 note TIGRFAM: Glucose-1-phosphate thymidylyltransferase, long form~KEGG: bvi:Bcep1808_3215 glucose-1-phosphate thymidylyltransferase~PFAM: Nucleotidyl transferase inference protein motif:TFAM:TIGR01207 db_xref GO:0008879 db_xref InterPro:IPR005835 db_xref InterPro:IPR005907 634622 635167 gene locus_tag Alide2_0610 634622 635167 CDS product dTDP-4-dehydrorhamnose 3,5-epimerase EC_number 5.1.3.13 transl_table 11 protein_id gb|AEB83026.1||gnl|jgi|Alide2_0610 note TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase-related~KEGG: dia:Dtpsy_0556 dTDP-4-dehydrorhamnose 3,5-epimerase~PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase-related inference protein motif:TFAM:TIGR01221 db_xref GO:0008830 db_xref InterPro:IPR000888 635158 636339 gene locus_tag Alide2_0611 635158 636339 CDS product protein of unknown function DUF1972 transl_table 11 protein_id gb|AEB83027.1||gnl|jgi|Alide2_0611 note PFAM: Domain of unknown function DUF1972; Glycosyl transferase, group 1~KEGG: gme:Gmet_2169 glycosyltransferase-like protein inference protein motif:PFAM:PF09314 db_xref InterPro:IPR001296 db_xref InterPro:IPR015393 636336 637247 gene locus_tag Alide2_0612 636336 637247 CDS product rhamnosyltransferase transl_table 11 protein_id gb|AEB83028.1||gnl|jgi|Alide2_0612 note KEGG: ajs:Ajs_0541 rhamnosyltransferase~TIGRFAM: Rhamnosyltransferase~PFAM: Glycosyl transferase, family 2 inference protein motif:TFAM:TIGR01556 db_xref InterPro:IPR001173 db_xref InterPro:IPR006446 637255 638958 gene locus_tag Alide2_0613 637255 638958 CDS product type II secretion system protein E transl_table 11 protein_id gb|AEB83029.1||gnl|jgi|Alide2_0613 note PFAM: Type II secretion system protein E; General secretory system II, protein E, N-terminal~KEGG: vei:Veis_0688 general secretory pathway protein E inference protein motif:PFAM:PF00437 db_xref GO:0005524 db_xref InterPro:IPR001482 db_xref InterPro:IPR007831 638951 640162 gene locus_tag Alide2_0614 638951 640162 CDS product Type II secretion system F domain protein transl_table 11 protein_id gb|AEB83030.1||gnl|jgi|Alide2_0614 note PFAM: Type II secretion system F domain~KEGG: eba:ebA1619 general secretion pathway protein F inference protein motif:PFAM:PF00482 db_xref InterPro:IPR018076 640189 640629 gene locus_tag Alide2_0615 640189 640629 CDS product general secretion pathway protein G transl_table 11 protein_id gb|AEB83031.1||gnl|jgi|Alide2_0615 note KEGG: aav:Aave_4158 general secretion pathway protein G~TIGRFAM: General secretion pathway protein G; Prepilin-type cleavage/methylation, N-terminal~PFAM: Type II secretion system protein G; Prepilin-type cleavage/methylation, N-terminal inference protein motif:TFAM:TIGR01710 db_xref GO:0008565 db_xref InterPro:IPR010054 db_xref InterPro:IPR012902 db_xref InterPro:IPR013545 640659 641141 gene locus_tag Alide2_0616 640659 641141 CDS product general secretion pathway protein H transl_table 11 protein_id gb|AEB83032.1||gnl|jgi|Alide2_0616 note KEGG: dac:Daci_1302 general secretion pathway protein H inference similar to AA sequence:KEGG:Daci_1302 db_xref InterPro:IPR012902 641138 641539 gene locus_tag Alide2_0617 641138 641539 CDS product general secretion pathway protein I transl_table 11 protein_id gb|AEB83033.1||gnl|jgi|Alide2_0617 note KEGG: aav:Aave_4156 general secretion pathway protein I inference similar to AA sequence:KEGG:Aave_4156 db_xref InterPro:IPR012902 641536 642147 gene locus_tag Alide2_0618 641536 642147 CDS product general secretion pathway protein J transl_table 11 protein_id gb|AEB83034.1||gnl|jgi|Alide2_0618 note KEGG: vei:Veis_0683 general secretion pathway protein J inference similar to AA sequence:KEGG:Veis_0683 db_xref InterPro:IPR012902 642144 643055 gene locus_tag Alide2_0619 642144 643055 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83035.1||gnl|jgi|Alide2_0619 note KEGG: eba:ebA1612 general secretory pathway protein K inference similar to AA sequence:KEGG:ebA1612 db_xref InterPro:IPR005628 643052 644065 gene locus_tag Alide2_0620 643052 644065 CDS product Fimbrial assembly family protein transl_table 11 protein_id gb|AEB83036.1||gnl|jgi|Alide2_0620 note PFAM: Fimbrial assembly~KEGG: aav:Aave_4153 fimbrial assembly family protein inference protein motif:PFAM:PF05137 db_xref InterPro:IPR007813 644062 644610 gene locus_tag Alide2_0621 644062 644610 CDS product General secretion pathway protein M transl_table 11 protein_id gb|AEB83037.1||gnl|jgi|Alide2_0621 note PFAM: General secretion pathway protein M~KEGG: vei:Veis_0680 general secretion pathway protein M inference protein motif:PFAM:PF10741 db_xref InterPro:IPR019677 644607 644948 gene locus_tag Alide2_0622 644607 644948 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83038.1||gnl|jgi|Alide2_0622 inference ab initio prediction:Prodigal:1.4 645226 644933 gene locus_tag Alide2_0623 645226 644933 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83039.1||gnl|jgi|Alide2_0623 note KEGG: pol:Bpro_2744 hypothetical protein inference similar to AA sequence:KEGG:Bpro_2744 646322 645192 gene locus_tag Alide2_0624 646322 645192 CDS product putative transposase transl_table 11 protein_id gb|AEB83040.1||gnl|jgi|Alide2_0624 note KEGG: pol:Bpro_2745 putative transposase inference similar to AA sequence:KEGG:Bpro_2745 646531 647694 gene locus_tag Alide2_0625 646531 647694 CDS product glycosyl transferase group 1 transl_table 11 protein_id gb|AEB83041.1||gnl|jgi|Alide2_0625 note PFAM: Glycosyl transferase, group 1~KEGG: dbr:Deba_0993 glycosyl transferase group 1 inference protein motif:PFAM:PF00534 db_xref InterPro:IPR001296 647765 648589 gene locus_tag Alide2_0626 647765 648589 CDS product ABC-2 type transporter transl_table 11 protein_id gb|AEB83042.1||gnl|jgi|Alide2_0626 note PFAM: ABC-2 type transporter~KEGG: mag:amb1063 ABC-type polysaccharide/polyol phosphate export systems inference protein motif:PFAM:PF01061 db_xref InterPro:IPR013525 648589 649809 gene locus_tag Alide2_0627 648589 649809 CDS product Teichoic-acid-transporting ATPase EC_number 3.6.3.40 transl_table 11 protein_id gb|AEB83043.1||gnl|jgi|Alide2_0627 note PFAM: ABC transporter-like~KEGG: vei:Veis_0673 ABC transporter related~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.40 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 649791 650702 gene locus_tag Alide2_0628 649791 650702 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83044.1||gnl|jgi|Alide2_0628 inference ab initio prediction:Prodigal:1.4 650695 651699 gene locus_tag Alide2_0629 650695 651699 CDS product Methyltransferase type 11 transl_table 11 protein_id gb|AEB83045.1||gnl|jgi|Alide2_0629 note PFAM: Methyltransferase type 11~KEGG: azl:AZL_f01750 hypothetical protein inference protein motif:PFAM:PF08241 db_xref GO:0008168 db_xref InterPro:IPR013216 651716 652360 gene locus_tag Alide2_0630 651716 652360 CDS product Lytic transglycosylase catalytic transl_table 11 protein_id gb|AEB83046.1||gnl|jgi|Alide2_0630 note PFAM: Lytic transglycosylase-like, catalytic~KEGG: rso:RSc0977 putative transglycosylase signal peptide protein inference protein motif:PFAM:PF01464 db_xref InterPro:IPR008258 652394 653494 gene locus_tag Alide2_0631 652394 653494 CDS product glycosyl transferase family 4 transl_table 11 protein_id gb|AEB83047.1||gnl|jgi|Alide2_0631 note PFAM: Glycosyl transferase, family 4~KEGG: vei:Veis_1227 glycosyl transferase family protein inference protein motif:PFAM:PF00953 db_xref GO:0008963 db_xref InterPro:IPR000715 653555 654445 gene locus_tag Alide2_0632 653555 654445 CDS product acetylglutamate kinase EC_number 2.7.2.8 transl_table 11 protein_id gb|AEB83048.1||gnl|jgi|Alide2_0632 note TIGRFAM: Acetylglutamate kinase~KEGG: ajs:Ajs_0588 acetylglutamate kinase~PFAM: Aspartate/glutamate/uridylate kinase inference protein motif:TFAM:TIGR00761 db_xref GO:0003991 db_xref InterPro:IPR001048 db_xref InterPro:IPR004662 654628 655263 gene locus_tag Alide2_0633 654628 655263 CDS product regulatory protein TetR transl_table 11 protein_id gb|AEB83049.1||gnl|jgi|Alide2_0633 note PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal~KEGG: ajs:Ajs_0589 nucleoid occlusion protein inference protein motif:PFAM:PF00440 db_xref GO:0003700 db_xref InterPro:IPR001647 655405 656061 gene locus_tag Alide2_0634 655405 656061 CDS product regulatory protein TetR transl_table 11 protein_id gb|AEB83050.1||gnl|jgi|Alide2_0634 note PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal~KEGG: dia:Dtpsy_0570 transcriptional regulator, TetR family inference protein motif:PFAM:PF00440 db_xref GO:0003700 db_xref InterPro:IPR001647 656109 657905 gene locus_tag Alide2_0635 656109 657905 CDS product Butyryl-CoA dehydrogenase EC_number 1.3.8.1 transl_table 11 protein_id gb|AEB83051.1||gnl|jgi|Alide2_0635 note KEGG: dia:Dtpsy_0571 acyl-CoA dehydrogenase domain protein~PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal inference protein motif:PRIAM:1.3.99.2 db_xref InterPro:IPR006090 db_xref InterPro:IPR006091 db_xref InterPro:IPR006092 657976 658404 gene locus_tag Alide2_0636 657976 658404 CDS product Protein of unknown function DUF2147 transl_table 11 protein_id gb|AEB83052.1||gnl|jgi|Alide2_0636 note KEGG: dia:Dtpsy_0572 hypothetical protein~manually curated~PFAM: Protein of unknown function DUF2147 inference protein motif:PFAM:PF09917 db_xref InterPro:IPR019223 658426 660828 gene locus_tag Alide2_0637 658426 660828 CDS product 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein transl_table 11 protein_id gb|AEB83053.1||gnl|jgi|Alide2_0637 note PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; Crotonase, core~KEGG: dac:Daci_1339 3-hydroxyacyl-CoA dehydrogenase NAD-binding inference protein motif:PFAM:PF02737 db_xref GO:0003824 db_xref GO:0016491 db_xref InterPro:IPR001753 db_xref InterPro:IPR006108 db_xref InterPro:IPR006176 660849 662042 gene locus_tag Alide2_0638 660849 662042 CDS product acetyl-CoA acetyltransferase EC_number 2.3.1.16 transl_table 11 protein_id gb|AEB83054.1||gnl|jgi|Alide2_0638 note TIGRFAM: Thiolase~KEGG: xtr:100490800 3-ketoacyl-CoA thiolase-like~PFAM: Thiolase, N-terminal; Thiolase, C-terminal inference protein motif:TFAM:TIGR01930 db_xref GO:0005524 db_xref InterPro:IPR002155 db_xref InterPro:IPR020616 db_xref InterPro:IPR020617 662086 662919 gene locus_tag Alide2_0639 662086 662919 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83055.1||gnl|jgi|Alide2_0639 note KEGG: dia:Dtpsy_0576 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_0576 662927 663703 gene locus_tag Alide2_0640 662927 663703 CDS product Enoyl-CoA hydratase/isomerase transl_table 11 protein_id gb|AEB83056.1||gnl|jgi|Alide2_0640 note PFAM: Crotonase, core~KEGG: dia:Dtpsy_0577 enoyl-CoA hydratase inference protein motif:PFAM:PF00378 db_xref GO:0003824 db_xref InterPro:IPR001753 664048 664608 gene locus_tag Alide2_0641 664048 664608 CDS product protein of unknown function DUF583 transl_table 11 protein_id gb|AEB83057.1||gnl|jgi|Alide2_0641 note PFAM: Protein of unknown function DUF583~KEGG: dia:Dtpsy_0579 protein of unknown function DUF583 inference protein motif:PFAM:PF04519 db_xref InterPro:IPR007607 665085 664660 gene locus_tag Alide2_0642 665085 664660 CDS product thioesterase superfamily protein transl_table 11 protein_id gb|AEB83058.1||gnl|jgi|Alide2_0642 note PFAM: Thioesterase superfamily~KEGG: ajs:Ajs_0601 thioesterase superfamily protein inference protein motif:PFAM:PF03061 db_xref InterPro:IPR006683 665128 666939 gene locus_tag Alide2_0643 665128 666939 CDS product Xenobiotic-transporting ATPase EC_number 3.6.3.44 transl_table 11 protein_id gb|AEB83059.1||gnl|jgi|Alide2_0643 note PFAM: ABC transporter-like; ABC transporter, transmembrane domain~KEGG: ajs:Ajs_0602 ABC transporter related~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.44 db_xref InterPro:IPR001140 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 666989 667321 gene locus_tag Alide2_0644 666989 667321 CDS product MazG nucleotide pyrophosphohydrolase transl_table 11 protein_id gb|AEB83060.1||gnl|jgi|Alide2_0644 note PFAM: NTP pyrophosphohydrolase MazG, putative catalytic core~KEGG: ajs:Ajs_0603 MazG nucleotide pyrophosphohydrolase inference protein motif:PFAM:PF03819 db_xref InterPro:IPR004518 668407 667376 gene locus_tag Alide2_0645 668407 667376 CDS product TRAP dicarboxylate transporter, DctP subunit transl_table 11 protein_id gb|AEB83061.1||gnl|jgi|Alide2_0645 note KEGG: ajs:Ajs_0604 TRAP dicarboxylate transporter, DctP subunit~TIGRFAM: TRAP dicarboxylate transporter, DctP subunit~PFAM: Extracellular solute-binding protein, family 7, bacteria inference protein motif:TFAM:TIGR00787 db_xref InterPro:IPR004682 db_xref InterPro:IPR018389 669729 668431 gene locus_tag Alide2_0646 669729 668431 CDS product TRAP dicarboxylate transporter, DctM subunit transl_table 11 protein_id gb|AEB83062.1||gnl|jgi|Alide2_0646 note KEGG: ajs:Ajs_0605 TRAP dicarboxylate transporter, DctM subunit~TIGRFAM: TRAP dicarboxylate transporter, DctM subunit~PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit inference protein motif:TFAM:TIGR00786 db_xref InterPro:IPR004681 db_xref InterPro:IPR010656 670307 669726 gene locus_tag Alide2_0647 670307 669726 CDS product Tripartite ATP-independent periplasmic transporter DctQ component transl_table 11 protein_id gb|AEB83063.1||gnl|jgi|Alide2_0647 note PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component~KEGG: ajs:Ajs_0606 tripartite ATP-independent periplasmic transporter DctQ inference protein motif:PFAM:PF04290 db_xref InterPro:IPR007387 670474 671421 gene locus_tag Alide2_0648 670474 671421 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB83064.1||gnl|jgi|Alide2_0648 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: dia:Dtpsy_0586 transcriptional regulator, LysR family inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 671625 672524 gene locus_tag Alide2_0649 671625 672524 CDS product ABC-type transporter, periplasmic subunit family 3 transl_table 11 protein_id gb|AEB83065.1||gnl|jgi|Alide2_0649 note KEGG: dia:Dtpsy_0588 extracellular solute-binding protein family 3~PFAM: Extracellular solute-binding protein, family 3~SMART: Extracellular solute-binding protein, family 3 inference protein motif:PFAM:PF00497 db_xref GO:0005215 db_xref InterPro:IPR001638 672628 673380 gene locus_tag Alide2_0650 672628 673380 CDS product polar amino acid ABC transporter, inner membrane subunit transl_table 11 protein_id gb|AEB83066.1||gnl|jgi|Alide2_0650 note KEGG: dia:Dtpsy_0589 polar amino acid ABC transporter, inner membrane subunit~TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family~PFAM: Binding-protein-dependent transport systems inner membrane component inference protein motif:TFAM:TIGR01726 db_xref GO:0005215 db_xref InterPro:IPR000515 db_xref InterPro:IPR010065 673382 674053 gene locus_tag Alide2_0651 673382 674053 CDS product polar amino acid ABC transporter, inner membrane subunit transl_table 11 protein_id gb|AEB83067.1||gnl|jgi|Alide2_0651 note KEGG: ctt:CtCNB1_4180 glutamate/aspartate transport systempermease protein GltK~TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family~PFAM: Binding-protein-dependent transport systems inner membrane component inference protein motif:TFAM:TIGR01726 db_xref GO:0005215 db_xref InterPro:IPR000515 db_xref InterPro:IPR010065 674078 674815 gene locus_tag Alide2_0652 674078 674815 CDS product Phosphonate-transporting ATPase EC_number 3.6.3.28 transl_table 11 protein_id gb|AEB83068.1||gnl|jgi|Alide2_0652 note PFAM: ABC transporter-like~KEGG: dia:Dtpsy_0591 ABC transporter related~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.28 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 675955 674921 gene locus_tag Alide2_0653 675955 674921 CDS product Ornithine cyclodeaminase EC_number 4.3.1.12 transl_table 11 protein_id gb|AEB83069.1||gnl|jgi|Alide2_0653 note KEGG: dia:Dtpsy_0592 ornithine cyclodeaminase~PFAM: Ornithine cyclodeaminase/mu-crystallin inference protein motif:PRIAM:4.3.1.12 db_xref InterPro:IPR003462 676837 676016 gene locus_tag Alide2_0654 676837 676016 CDS product HAD-superfamily hydrolase, subfamily IIB transl_table 11 protein_id gb|AEB83070.1||gnl|jgi|Alide2_0654 note KEGG: ajs:Ajs_0616 HAD family hydrolase~TIGRFAM: HAD-superfamily hydrolase, subfamily IIB~PFAM: HAD superfamily hydrolase-like, type 3 inference protein motif:TFAM:TIGR01484 db_xref GO:0003824 db_xref InterPro:IPR006379 db_xref InterPro:IPR013200 678465 676840 gene locus_tag Alide2_0655 678465 676840 CDS product peptide chain release factor 3 transl_table 11 protein_id gb|AEB83071.1||gnl|jgi|Alide2_0655 note KEGG: xtr:100494427 peptide chain release factor 3-like~TIGRFAM: Peptide chain release factor 3; Small GTP-binding protein~PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2 inference protein motif:TFAM:TIGR00503 db_xref GO:0005525 db_xref InterPro:IPR000795 db_xref InterPro:IPR004161 db_xref InterPro:IPR004548 db_xref InterPro:IPR005225 679338 678568 gene locus_tag Alide2_0656 679338 678568 CDS product short-chain dehydrogenase/reductase SDR transl_table 11 protein_id gb|AEB83072.1||gnl|jgi|Alide2_0656 note PFAM: Short-chain dehydrogenase/reductase SDR~KEGG: rfr:Rfer_0646 short-chain dehydrogenase/reductase SDR inference protein motif:PFAM:PF00106 db_xref GO:0016491 db_xref InterPro:IPR002198 679580 681010 gene locus_tag Alide2_0657 679580 681010 CDS product adenosylhomocysteinase EC_number 3.3.1.1 transl_table 11 protein_id gb|AEB83073.1||gnl|jgi|Alide2_0657 note TIGRFAM: Adenosylhomocysteinase~KEGG: dia:Dtpsy_0597 S-adenosyl-L-homocysteine hydrolase~PFAM: Adenosylhomocysteinase; S-adenosyl-L-homocysteine hydrolase, NAD binding inference protein motif:TFAM:TIGR00936 db_xref GO:0004013 db_xref InterPro:IPR000043 db_xref InterPro:IPR015878 681117 682118 gene locus_tag Alide2_0658 681117 682118 CDS product ribosomal RNA methyltransferase RrmJ/FtsJ transl_table 11 protein_id gb|AEB83074.1||gnl|jgi|Alide2_0658 note PFAM: Ribosomal RNA methyltransferase RrmJ/FtsJ~KEGG: ajs:Ajs_0619 ribosomal RNA methyltransferase RrmJ/FtsJ inference protein motif:PFAM:PF01728 db_xref GO:0003676 db_xref GO:0008168 db_xref InterPro:IPR002877 682115 682942 gene locus_tag Alide2_0659 682115 682942 CDS product 5,10-methylenetetrahydrofolate reductase EC_number 1.5.1.20 transl_table 11 protein_id gb|AEB83075.1||gnl|jgi|Alide2_0659 note TIGRFAM: 5,10-methylenetetrahydrofolate reductase~KEGG: dia:Dtpsy_0599 5,10-methylenetetrahydrofolate reductase~PFAM: Methylenetetrahydrofolate reductase inference protein motif:TFAM:TIGR00676 db_xref InterPro:IPR003171 db_xref InterPro:IPR004620 682936 683688 gene locus_tag Alide2_0660 682936 683688 CDS product rare lipoprotein A transl_table 11 protein_id gb|AEB83076.1||gnl|jgi|Alide2_0660 note manually curated~TIGRFAM: Rare lipoprotein A, bacterial~KEGG: dia:Dtpsy_0601 rare lipoprotein A~PFAM: Barwin-related endoglucanase inference protein motif:TFAM:TIGR00413 db_xref InterPro:IPR009009 db_xref InterPro:IPR012997 684606 683689 gene locus_tag Alide2_0661 684606 683689 CDS product protein of unknown function DUF519 transl_table 11 protein_id gb|AEB83077.1||gnl|jgi|Alide2_0661 note PFAM: Protein of unknown function DUF519~KEGG: dia:Dtpsy_0602 protein of unknown function DUF519 inference protein motif:PFAM:PF04378 db_xref InterPro:IPR007473 684783 686579 gene locus_tag Alide2_0662 684783 686579 CDS product serine/threonine protein kinase transl_table 11 protein_id gb|AEB83078.1||gnl|jgi|Alide2_0662 note KEGG: ajs:Ajs_0624 protein kinase~PFAM: Serine/threonine-protein kinase-like domain~SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, catalytic domain inference protein motif:PFAM:PF00069 db_xref GO:0004672 db_xref GO:0005524 db_xref InterPro:IPR002290 db_xref InterPro:IPR017442 db_xref InterPro:IPR020635 686685 687152 gene locus_tag Alide2_0663 686685 687152 CDS product ribosomal protein L13 transl_table 11 protein_id gb|AEB83079.1||gnl|jgi|Alide2_0663 note KEGG: xtr:100489998 50S ribosomal protein L13-like~TIGRFAM: Ribosomal protein L13, bacterial-type~PFAM: Ribosomal protein L13 inference protein motif:TFAM:TIGR01066 db_xref GO:0003735 db_xref InterPro:IPR005822 db_xref InterPro:IPR005823 687162 687554 gene locus_tag Alide2_0664 687162 687554 CDS product ribosomal protein S9 transl_table 11 protein_id gb|AEB83080.1||gnl|jgi|Alide2_0664 note PFAM: Ribosomal protein S9~KEGG: xtr:100487283 30S ribosomal protein S9-like inference protein motif:PFAM:PF00380 db_xref GO:0003735 db_xref InterPro:IPR000754 687718 688092 gene locus_tag Alide2_0665 687718 688092 CDS product iron-sulfur cluster assembly accessory protein transl_table 11 protein_id gb|AEB83081.1||gnl|jgi|Alide2_0665 note KEGG: dia:Dtpsy_0608 iron-sulfur cluster insertion protein ErpA~TIGRFAM: FeS cluster insertion~PFAM: FeS cluster biogenesis inference protein motif:TFAM:TIGR00049 db_xref GO:0005198 db_xref GO:0051536 db_xref InterPro:IPR000361 db_xref InterPro:IPR016092 689828 688704 gene locus_tag Alide2_0666 689828 688704 CDS product Anhydro-N-acetylmuramic acid kinase transl_table 11 protein_id gb|AEB83082.1||gnl|jgi|Alide2_0666 note manually curated~HAMAP: Anhydro-N-acetylmuramic acid kinase~KEGG: dia:Dtpsy_0609 anhydro-N-acetylmuramic acid kinase~PFAM: Anhydro-N-acetylmuramic acid kinase inference protein motif:HAMAP:MF_01270 db_xref InterPro:IPR005338 691226 689844 gene locus_tag Alide2_0667 691226 689844 CDS product Peptidase M23 transl_table 11 protein_id gb|AEB83083.1||gnl|jgi|Alide2_0667 note PFAM: Peptidase M23~KEGG: ajs:Ajs_0631 peptidase M23B inference protein motif:PFAM:PF01551 db_xref InterPro:IPR016047 691398 692630 gene locus_tag Alide2_0668 691398 692630 CDS product tyrosyl-tRNA synthetase EC_number 6.1.1.1 transl_table 11 protein_id gb|AEB83084.1||gnl|jgi|Alide2_0668 note KEGG: ajs:Ajs_0632 tyrosyl-tRNA synthetase~PFAM: Aminoacyl-tRNA synthetase, class Ib; RNA-binding S4~manually curated~TIGRFAM: Tyrosyl-tRNA synthetase, class Ib~SMART: RNA-binding S4 inference protein motif:TFAM:TIGR00234 db_xref GO:0000166 db_xref GO:0004831 db_xref GO:0005524 db_xref InterPro:IPR002305 db_xref InterPro:IPR002307 db_xref InterPro:IPR002942 693657 692692 gene locus_tag Alide2_0669 693657 692692 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB83085.1||gnl|jgi|Alide2_0669 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: ajs:Ajs_0634 LysR family transcriptional regulator inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 693709 695133 gene locus_tag Alide2_0670 693709 695133 CDS product UDP-N-acetylglucosamine pyrophosphorylase EC_number 2.3.1.157 transl_table 11 protein_id gb|AEB83086.1||gnl|jgi|Alide2_0670 note TIGRFAM: Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase~KEGG: ajs:Ajs_0636 glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase~PFAM: Nucleotidyl transferase; Bacterial transferase hexapeptide repeat inference protein motif:TFAM:TIGR01173 db_xref GO:0000287 db_xref GO:0003977 db_xref GO:0019134 db_xref InterPro:IPR001451 db_xref InterPro:IPR005835 db_xref InterPro:IPR005882 695130 695912 gene locus_tag Alide2_0671 695130 695912 CDS product histidine kinase transl_table 11 protein_id gb|AEB83087.1||gnl|jgi|Alide2_0671 note KEGG: ajs:Ajs_0637 histidine kinase~PFAM: ATPase-like, ATP-binding domain~SMART: ATPase-like, ATP-binding domain inference protein motif:PFAM:PF02518 db_xref GO:0005524 db_xref InterPro:IPR003594 696276 695941 gene locus_tag Alide2_0672 696276 695941 CDS product MerR family transcriptional regulator transl_table 11 protein_id gb|AEB83088.1||gnl|jgi|Alide2_0672 note KEGG: dia:Dtpsy_0617 MerR family transcriptional regulator inference similar to AA sequence:KEGG:Dtpsy_0617 697274 696279 gene locus_tag Alide2_0673 697274 696279 CDS product heat shock protein DnaJ domain protein transl_table 11 protein_id gb|AEB83089.1||gnl|jgi|Alide2_0673 note KEGG: dia:Dtpsy_0618 heat shock protein DnaJ domain protein~PFAM: Heat shock protein DnaJ, N-terminal; Chaperone DnaJ, C-terminal~SMART: Heat shock protein DnaJ, N-terminal inference protein motif:PFAM:PF00226 db_xref GO:0031072 db_xref GO:0051082 db_xref InterPro:IPR001623 db_xref InterPro:IPR002939 697900 697379 gene locus_tag Alide2_0674 697900 697379 CDS product transcriptional regulator, AsnC family transl_table 11 protein_id gb|AEB83090.1||gnl|jgi|Alide2_0674 note KEGG: ajs:Ajs_0640 AsnC family transcriptional regulator~PFAM: Transcription regulator AsnC-type, C-terminal~SMART: Transcription regulator AsnC-type inference protein motif:PFAM:PF01037 db_xref GO:0003700 db_xref GO:0043565 db_xref InterPro:IPR019887 db_xref InterPro:IPR019888 698005 699915 gene locus_tag Alide2_0675 698005 699915 CDS product Glucosamine--fructose-6-phosphate aminotransferase (isomerizing) EC_number 2.6.1.16 transl_table 11 protein_id gb|AEB83091.1||gnl|jgi|Alide2_0675 note PFAM: Glutamine amidotransferase, class-II; Sugar isomerase (SIS)~TIGRFAM: Glucosamine-fructose-6-phosphate aminotransferase, isomerising~HAMAP: Glucosamine-fructose-6-phosphate aminotransferase, isomerising~KEGG: dia:Dtpsy_0620 glucosamine--fructose-6-phosphate aminotransferase inference protein motif:HAMAP:MF_00164 db_xref InterPro:IPR000583 db_xref InterPro:IPR001347 db_xref InterPro:IPR005855 701395 700592 gene locus_tag Alide2_0676 701395 700592 CDS product IstB domain protein ATP-binding protein transl_table 11 protein_id gb|AEB83092.1||gnl|jgi|Alide2_0676 note KEGG: axy:AXYL_06594 IstB-like ATP binding family protein 3~PFAM: IstB-like ATP-binding protein~SMART: ATPase, AAA+ type, core inference protein motif:PFAM:PF01695 db_xref GO:0005524 db_xref InterPro:IPR002611 db_xref InterPro:IPR003593 702911 701385 gene locus_tag Alide2_0677 702911 701385 CDS product Integrase catalytic region transl_table 11 protein_id gb|AEB83093.1||gnl|jgi|Alide2_0677 note PFAM: Integrase, catalytic core~KEGG: axy:AXYL_06593 integrase family protein 10 inference protein motif:PFAM:PF00665 db_xref GO:0003677 db_xref InterPro:IPR001584 703221 702997 gene locus_tag Alide2_0678 703221 702997 CDS product transposase IS66 transl_table 11 protein_id gb|AEB83094.1||gnl|jgi|Alide2_0678 note KEGG: ajs:Ajs_2916 transposase IS66 inference similar to AA sequence:KEGG:Ajs_2916 703636 703304 gene locus_tag Alide2_0679 703636 703304 CDS product IS66 Orf2 family protein transl_table 11 protein_id gb|AEB83095.1||gnl|jgi|Alide2_0679 note PFAM: Transposase (putative), IS66 Orf2-like~KEGG: rfr:Rfer_2710 IS66 Orf2 like inference protein motif:PFAM:PF05717 db_xref InterPro:IPR008878 704061 703633 gene locus_tag Alide2_0680 704061 703633 CDS product transposase IS3/IS911 family protein transl_table 11 protein_id gb|AEB83096.1||gnl|jgi|Alide2_0680 note PFAM: Transposase IS3/IS911family~KEGG: rfr:Rfer_2709 transposase IS3/IS911 inference protein motif:PFAM:PF01527 db_xref GO:0003677 db_xref GO:0004803 db_xref InterPro:IPR002514 705067 704813 gene locus_tag Alide2_0681 705067 704813 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83097.1||gnl|jgi|Alide2_0681 note KEGG: ctt:CtCNB1_4017 hypothetical protein inference similar to AA sequence:KEGG:CtCNB1_4017 705929 705141 gene locus_tag Alide2_0682 705929 705141 CDS product oxidoreductase molybdopterin binding protein transl_table 11 protein_id gb|AEB83098.1||gnl|jgi|Alide2_0682 note PFAM: Oxidoreductase, molybdopterin-binding domain~KEGG: ctt:CtCNB1_4018 oxidoreductase, molybdopterin binding protein inference protein motif:PFAM:PF00174 db_xref GO:0009055 db_xref InterPro:IPR000572 706582 705926 gene locus_tag Alide2_0683 706582 705926 CDS product putative transmembrane hydrogenase cytochrome transl_table 11 protein_id gb|AEB83099.1||gnl|jgi|Alide2_0683 note KEGG: ctt:CtCNB1_4019 putative transmembrane hydrogenase cytochrome inference similar to AA sequence:KEGG:CtCNB1_4019 706678 707388 gene locus_tag Alide2_0684 706678 707388 CDS product two component transcriptional regulator, winged helix family transl_table 11 protein_id gb|AEB83100.1||gnl|jgi|Alide2_0684 note KEGG: pol:Bpro_0543 two component transcriptional regulator~PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal~SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal inference protein motif:PFAM:PF00072 db_xref GO:0000156 db_xref GO:0003677 db_xref InterPro:IPR001789 db_xref InterPro:IPR001867 707385 708866 gene locus_tag Alide2_0685 707385 708866 CDS product integral membrane sensor signal transduction histidine kinase transl_table 11 protein_id gb|AEB83101.1||gnl|jgi|Alide2_0685 note KEGG: vap:Vapar_2987 histidine kinase~PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain~SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain inference protein motif:PFAM:PF02518 db_xref GO:0000155 db_xref GO:0004871 db_xref GO:0005524 db_xref InterPro:IPR003594 db_xref InterPro:IPR003660 db_xref InterPro:IPR003661 709231 708884 gene locus_tag Alide2_0686 709231 708884 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83102.1||gnl|jgi|Alide2_0686 inference ab initio prediction:Prodigal:1.4 710213 709407 gene locus_tag Alide2_0687 710213 709407 CDS product PEP motif putative anchor domain protein transl_table 11 protein_id gb|AEB83103.1||gnl|jgi|Alide2_0687 note TIGRFAM: PEP-CTERM anchor~PFAM: von Willebrand factor, type A; PEP-CTERM bacterial~KEGG: cja:CJA_0975 von Willebrand factor type A domain protein~SMART: von Willebrand factor, type A inference protein motif:TFAM:TIGR02595 db_xref InterPro:IPR002035 db_xref InterPro:IPR011449 db_xref InterPro:IPR013424 710624 712066 gene locus_tag Alide2_0688 710624 712066 CDS product mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase EC_number 2.7.7.13 transl_table 11 protein_id gb|AEB83104.1||gnl|jgi|Alide2_0688 note TIGRFAM: Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase~KEGG: rfr:Rfer_0711 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase~PFAM: Mannose-6-phosphate isomerase, type II, C-terminal; Nucleotidyl transferase inference protein motif:TFAM:TIGR01479 db_xref GO:0016779 db_xref InterPro:IPR001538 db_xref InterPro:IPR005835 db_xref InterPro:IPR006375 712290 712931 gene locus_tag Alide2_0689 712290 712931 CDS product polysaccharide export protein, PEP-CTERM sytem-associated transl_table 11 protein_id gb|AEB83105.1||gnl|jgi|Alide2_0689 note KEGG: rfr:Rfer_0658 polysaccharide export protein~TIGRFAM: PEP-CTERM, putative polysaccharide export protein~PFAM: Polysaccharide export protein; Soluble ligand binding domain inference protein motif:TFAM:TIGR03027 db_xref InterPro:IPR003715 db_xref InterPro:IPR017477 db_xref InterPro:IPR019554 712978 714540 gene locus_tag Alide2_0690 712978 714540 CDS product polysaccharide chain length determinant protein, PEP-CTERM locus subfamily transl_table 11 protein_id gb|AEB83106.1||gnl|jgi|Alide2_0690 note manually curated~TIGRFAM: PEP-CTERM locus polysaccharide chain length determinant~KEGG: rfr:Rfer_0659 lipopolysaccharide biosynthesis~PFAM: Lipopolysaccharide biosynthesis inference protein motif:TFAM:TIGR03007 db_xref InterPro:IPR003856 db_xref InterPro:IPR014345 714549 715511 gene locus_tag Alide2_0691 714549 715511 CDS product non-specific protein-tyrosine kinase transl_table 11 protein_id gb|AEB83107.1||gnl|jgi|Alide2_0691 note manually curated~KEGG: app:CAP2UW1_1413 non-specific protein-tyrosine kinase inference similar to AA sequence:KEGG:CAP2UW1_1413 715540 717195 gene locus_tag Alide2_0692 715540 717195 CDS product PEP-CTERM system associated protein transl_table 11 protein_id gb|AEB83108.1||gnl|jgi|Alide2_0692 note TIGRFAM: Conserved hypothetical protein CHP03016, PEP-CTERM~KEGG: rfr:Rfer_0661 hypothetical protein inference protein motif:TFAM:TIGR03016 db_xref InterPro:IPR017467 717199 718299 gene locus_tag Alide2_0693 717199 718299 CDS product secretion ATPase, PEP-CTERM locus subfamily transl_table 11 protein_id gb|AEB83109.1||gnl|jgi|Alide2_0693 note KEGG: rfr:Rfer_0662 ATPase~TIGRFAM: ATPase, secretion system, PEP-CTERM, predicted~SMART: ATPase, AAA+ type, core inference protein motif:TFAM:TIGR03015 db_xref InterPro:IPR003593 db_xref InterPro:IPR017466 718308 719174 gene locus_tag Alide2_0694 718308 719174 CDS product polysaccharide deactylase family protein, PEP-CTERM locus subfamily transl_table 11 protein_id gb|AEB83110.1||gnl|jgi|Alide2_0694 note KEGG: app:CAP2UW1_1417 polysaccharide deactylase family protein, PEP-Cterm locus subfamily~TIGRFAM: PEP-CTERM locus, polysaccharide deactylase~PFAM: Polysaccharide deacetylase inference protein motif:TFAM:TIGR03006 db_xref InterPro:IPR002509 db_xref InterPro:IPR014344 719182 720228 gene locus_tag Alide2_0695 719182 720228 CDS product FemAB-related protein, PEP-CTERM system-associated transl_table 11 protein_id gb|AEB83111.1||gnl|jgi|Alide2_0695 note KEGG: rfr:Rfer_0665 hypothetical protein~manually curated~TIGRFAM: PEP-CTERM system-associated, FemAB-related inference protein motif:TFAM:TIGR03019 db_xref InterPro:IPR017469 720242 721480 gene locus_tag Alide2_0696 720242 721480 CDS product sugar transferase, PEP-CTERM/EpsH1 system associated transl_table 11 protein_id gb|AEB83112.1||gnl|jgi|Alide2_0696 note KEGG: dar:Daro_2405 glycosyl transferase, group 1~TIGRFAM: Sugar transferase, PEP-CTERM, Stp1~PFAM: Glycosyl transferase, group 1 inference protein motif:TFAM:TIGR03087 db_xref InterPro:IPR001296 db_xref InterPro:IPR017521 721458 723059 gene locus_tag Alide2_0697 721458 723059 CDS product exosortase 1 transl_table 11 protein_id gb|AEB83113.1||gnl|jgi|Alide2_0697 note KEGG: rfr:Rfer_0666 hypothetical protein~TIGRFAM: Exosortase 1; Exosortase, EpsH; Methanolan biosynthesis EpsI~PFAM: Exosortase EpsH-related inference protein motif:TFAM:TIGR03109 db_xref InterPro:IPR013426 db_xref InterPro:IPR014263 db_xref InterPro:IPR017540 db_xref InterPro:IPR019127 723062 724972 gene locus_tag Alide2_0698 723062 724972 CDS product exosortase 1 system-associated amidotransferase 1 EC_number 6.3.5.4 transl_table 11 protein_id gb|AEB83114.1||gnl|jgi|Alide2_0698 note TIGRFAM: Exosortase 1 system-associated amidotransferase 1; Asparagine synthase, glutamine-hydrolyzing~KEGG: rfr:Rfer_0669 asparagine synthase, glutamine-hydrolyzing~PFAM: Asparagine synthase; Glutamine amidotransferase, class-II inference protein motif:TFAM:TIGR03108 db_xref GO:0004066 db_xref InterPro:IPR000583 db_xref InterPro:IPR001962 db_xref InterPro:IPR006426 db_xref InterPro:IPR017539 724965 726119 gene locus_tag Alide2_0699 724965 726119 CDS product sugar transferase, PEP-CTERM/EpsH1 system associated transl_table 11 protein_id gb|AEB83115.1||gnl|jgi|Alide2_0699 note KEGG: rfr:Rfer_0668 glycosyl transferase, group 1~TIGRFAM: Sugar transferase, PEP-CTERM, Stp2~PFAM: Glycosyl transferase, group 1 inference protein motif:TFAM:TIGR03088 db_xref InterPro:IPR001296 db_xref InterPro:IPR017522 726121 727275 gene locus_tag Alide2_0700 726121 727275 CDS product glycosyl transferase group 1 transl_table 11 protein_id gb|AEB83116.1||gnl|jgi|Alide2_0700 note PFAM: Glycosyl transferase, group 1~KEGG: rru:Rru_A3107 glycosyl transferase, group 1 inference protein motif:PFAM:PF00534 db_xref InterPro:IPR001296 727275 728456 gene locus_tag Alide2_0701 727275 728456 CDS product glycosyl transferase group 1 transl_table 11 protein_id gb|AEB83117.1||gnl|jgi|Alide2_0701 note PFAM: Glycosyl transferase, group 1~KEGG: hse:Hsero_2751 glycosyltransferase 1 protein inference protein motif:PFAM:PF00534 db_xref InterPro:IPR001296 728443 730065 gene locus_tag Alide2_0702 728443 730065 CDS product 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family-like protein transl_table 11 protein_id gb|AEB83118.1||gnl|jgi|Alide2_0702 note KEGG: tmz:Tmz1t_3254 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family-like protein inference similar to AA sequence:KEGG:Tmz1t_3254 730090 730221 gene locus_tag Alide2_0703 730090 730221 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83119.1||gnl|jgi|Alide2_0703 inference ab initio prediction:Prodigal:1.4 730256 731587 gene locus_tag Alide2_0704 730256 731587 CDS product wzy family polymerase, exosortase system type 1 associated transl_table 11 protein_id gb|AEB83120.1||gnl|jgi|Alide2_0704 note TIGRFAM: Conserved hypothetical protein CHP03097, O-antigen ligase-related~KEGG: hse:Hsero_2764 O-antigen polymerase inference protein motif:TFAM:TIGR03097 db_xref InterPro:IPR017528 731584 732546 gene locus_tag Alide2_0705 731584 732546 CDS product polysaccharide deacetylase transl_table 11 protein_id gb|AEB83121.1||gnl|jgi|Alide2_0705 note PFAM: Polysaccharide deacetylase~KEGG: neu:NE0847 hypothetical protein inference protein motif:PFAM:PF01522 db_xref GO:0004066 db_xref InterPro:IPR002509 732543 733556 gene locus_tag Alide2_0706 732543 733556 CDS product polysaccharide deacetylase transl_table 11 protein_id gb|AEB83122.1||gnl|jgi|Alide2_0706 note PFAM: Polysaccharide deacetylase~KEGG: tgr:Tgr7_2375 polysaccharide deacetylase inference protein motif:PFAM:PF01522 db_xref GO:0004066 db_xref InterPro:IPR002509 733568 734605 gene locus_tag Alide2_0707 733568 734605 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83123.1||gnl|jgi|Alide2_0707 note KEGG: psl:Psta_3837 hypothetical protein inference similar to AA sequence:KEGG:Psta_3837 735553 734606 gene locus_tag Alide2_0708 735553 734606 CDS product glycosyl transferase family 2 transl_table 11 protein_id gb|AEB83124.1||gnl|jgi|Alide2_0708 note PFAM: Glycosyl transferase, family 2~KEGG: tkm:TK90_2524 glycosyl transferase family 2 inference protein motif:PFAM:PF00535 db_xref InterPro:IPR001173 737087 735666 gene locus_tag Alide2_0709 737087 735666 CDS product polysaccharide biosynthesis protein transl_table 11 protein_id gb|AEB83125.1||gnl|jgi|Alide2_0709 note PFAM: Polysaccharide biosynthesis protein~KEGG: nwa:Nwat_1744 polysaccharide biosynthesis protein inference protein motif:PFAM:PF01943 db_xref InterPro:IPR002797 738281 737184 gene locus_tag Alide2_0710 738281 737184 CDS product UDP-glucose 4-epimerase EC_number 5.1.3.2 transl_table 11 protein_id gb|AEB83126.1||gnl|jgi|Alide2_0710 note KEGG: pol:Bpro_3996 NAD-dependent epimerase/dehydratase~PFAM: NAD-dependent epimerase/dehydratase inference protein motif:PRIAM:5.1.3.2 db_xref InterPro:IPR001509 739585 738308 gene locus_tag Alide2_0711 739585 738308 CDS product nucleotide sugar dehydrogenase transl_table 11 protein_id gb|AEB83127.1||gnl|jgi|Alide2_0711 note manually curated~TIGRFAM: Nucleotide sugar dehydrogenase~KEGG: reu:Reut_B5375 UDP-glucose/GDP-mannose dehydrogenase~PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase, C-terminal inference protein motif:TFAM:TIGR03026 db_xref GO:0004066 db_xref GO:0051287 db_xref InterPro:IPR001732 db_xref InterPro:IPR014026 db_xref InterPro:IPR014027 db_xref InterPro:IPR017476 741981 740089 gene locus_tag Alide2_0712 741981 740089 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83128.1||gnl|jgi|Alide2_0712 note KEGG: hse:Hsero_2760 hypothetical protein inference similar to AA sequence:KEGG:Hsero_2760 742681 743748 gene locus_tag Alide2_0713 742681 743748 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83129.1||gnl|jgi|Alide2_0713 note manually curated~KEGG: hse:Hsero_2738 hypothetical protein inference similar to AA sequence:KEGG:Hsero_2738 744609 743851 gene locus_tag Alide2_0714 744609 743851 CDS product PEP motif putative anchor domain protein transl_table 11 protein_id gb|AEB83130.1||gnl|jgi|Alide2_0714 note KEGG: cyt:cce_4547 hypothetical protein~TIGRFAM: PEP-CTERM anchor~PFAM: PEP-CTERM bacterial inference protein motif:TFAM:TIGR02595 db_xref InterPro:IPR011449 db_xref InterPro:IPR013424 745646 744804 gene locus_tag Alide2_0715 745646 744804 CDS product hydrolase, exosortase system type 1 associated transl_table 11 protein_id gb|AEB83131.1||gnl|jgi|Alide2_0715 note KEGG: rfr:Rfer_0694 esterase/lipase/thioesterase family protein~TIGRFAM: Hydrolase, ortholog 1, exosortase system type 1 associated~PFAM: Alpha/beta hydrolase fold-1 inference protein motif:TFAM:TIGR03100 db_xref InterPro:IPR000073 db_xref InterPro:IPR017531 746497 745643 gene locus_tag Alide2_0716 746497 745643 CDS product hydrolase, exosortase system type 1 associated transl_table 11 protein_id gb|AEB83132.1||gnl|jgi|Alide2_0716 note TIGRFAM: Hydrolase, ortholog 2, exosortase system type 1 associated~KEGG: app:CAP2UW1_4344 hydrolase, exosortase system type 1 associated inference protein motif:TFAM:TIGR03101 db_xref InterPro:IPR017532 746759 746499 gene locus_tag Alide2_0717 746759 746499 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83133.1||gnl|jgi|Alide2_0717 note KEGG: rfr:Rfer_0698 hypothetical protein inference similar to AA sequence:KEGG:Rfer_0698 746843 748489 gene locus_tag Alide2_0718 746843 748489 CDS product acyl-CoA ligase (AMP-forming), exosortase system type 1 associated EC_number 6.2.1.3 transl_table 11 protein_id gb|AEB83134.1||gnl|jgi|Alide2_0718 note TIGRFAM: Acyl-CoA ligase (AMP-forming), exosortase system type 1 associated~KEGG: app:CAP2UW1_1626 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated~PFAM: AMP-dependent synthetase/ligase inference protein motif:TFAM:TIGR03098 db_xref InterPro:IPR000873 db_xref InterPro:IPR017529 748476 749681 gene locus_tag Alide2_0719 748476 749681 CDS product pyridoxal-dependent decarboxylase, exosortase system type 1 associated EC_number 4.1.1.20 transl_table 11 protein_id gb|AEB83135.1||gnl|jgi|Alide2_0719 note TIGRFAM: Pyridoxal-dependent decarboxylase, exosortase system type 1 associated~KEGG: rfr:Rfer_0700 Orn/DAP/Arg decarboxylase 2~PFAM: Orn/DAP/Arg decarboxylase 2, C-terminal; Orn/DAP/Arg decarboxylase 2, N-terminal inference protein motif:TFAM:TIGR03099 db_xref InterPro:IPR017530 db_xref InterPro:IPR022643 db_xref InterPro:IPR022644 749684 751765 gene locus_tag Alide2_0720 749684 751765 CDS product multi-sensor signal transduction histidine kinase transl_table 11 protein_id gb|AEB83136.1||gnl|jgi|Alide2_0720 note TIGRFAM: Signal transduction histidine kinase, PEP-CTERM system, putative~PFAM: ATPase-like, ATP-binding domain; GAF; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain~KEGG: rfr:Rfer_0703 periplasmic sensor signal transduction histidine kinase~SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain inference protein motif:TFAM:TIGR02916 db_xref InterPro:IPR003018 db_xref InterPro:IPR003594 db_xref InterPro:IPR003661 db_xref InterPro:IPR014265 751774 753135 gene locus_tag Alide2_0721 751774 753135 CDS product two component, sigma54 specific, transcriptional regulator, Fis family transl_table 11 protein_id gb|AEB83137.1||gnl|jgi|Alide2_0721 note TIGRFAM: Signal transduction response regulator, PEP-CTERM system, putative~PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver domain; Helix-turn-helix, Fis-type~KEGG: rfr:Rfer_0704 two component, sigma54 specific, fis family transcriptional regulator~SMART: Signal transduction response regulator, receiver domain; ATPase, AAA+ type, core inference protein motif:TFAM:TIGR02915 db_xref InterPro:IPR001789 db_xref InterPro:IPR002078 db_xref InterPro:IPR002197 db_xref InterPro:IPR003593 db_xref InterPro:IPR014264 753159 755939 gene locus_tag Alide2_0722 753159 755939 CDS product PEP-CTERM system TPR-repeat lipoprotein transl_table 11 protein_id gb|AEB83138.1||gnl|jgi|Alide2_0722 note KEGG: rfr:Rfer_0705 tetratricopeptide TPR_2~TIGRFAM: PEP-CTERM system TPR-repeat lipoprotein, putative~PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-4; Tetratricopeptide TPR-1 inference protein motif:TFAM:TIGR02917 db_xref InterPro:IPR001440 db_xref InterPro:IPR011717 db_xref InterPro:IPR013105 db_xref InterPro:IPR014266 db_xref InterPro:IPR019734 755989 756774 gene locus_tag Alide2_0723 755989 756774 CDS product peptidase S1 and S6 chymotrypsin/Hap transl_table 11 protein_id gb|AEB83139.1||gnl|jgi|Alide2_0723 note PFAM: Peptidase S1/S6, chymotrypsin/Hap~KEGG: rfr:Rfer_0710 peptidase S1 and S6, chymotrypsin/Hap inference protein motif:PFAM:PF00089 db_xref GO:0004252 db_xref InterPro:IPR001254 757167 756802 gene locus_tag Alide2_0724 757167 756802 CDS product putative small multi-drug resistant family protein transl_table 11 protein_id gb|AEB83140.1||gnl|jgi|Alide2_0724 note KEGG: azo:azo0349 putative small multi-drug resistant family protein inference similar to AA sequence:KEGG:azo0349 758612 757164 gene locus_tag Alide2_0725 758612 757164 CDS product UbiA prenyltransferase transl_table 11 protein_id gb|AEB83141.1||gnl|jgi|Alide2_0725 note PFAM: UbiA prenyltransferase~KEGG: azo:azo0348 hypothetical protein inference protein motif:PFAM:PF01040 db_xref GO:0004659 db_xref InterPro:IPR000537 759555 758662 gene locus_tag Alide2_0726 759555 758662 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB83142.1||gnl|jgi|Alide2_0726 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: dac:Daci_4993 LysR family transcriptional regulator inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 759717 760718 gene locus_tag Alide2_0727 759717 760718 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83143.1||gnl|jgi|Alide2_0727 note KEGG: dac:Daci_4992 hypothetical protein inference similar to AA sequence:KEGG:Daci_4992 db_xref InterPro:IPR005064 760730 762007 gene locus_tag Alide2_0728 760730 762007 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83144.1||gnl|jgi|Alide2_0728 note KEGG: ctt:CtCNB1_3962 hypothetical protein inference similar to AA sequence:KEGG:CtCNB1_3962 762275 762015 gene locus_tag Alide2_0729 762275 762015 CDS product Translation initiation factor IF-1 transl_table 11 protein_id gb|AEB83145.1||gnl|jgi|Alide2_0729 note TIGRFAM: Translation initiation factor IF-1~HAMAP: Translation initiation factor IF-1~KEGG: dia:Dtpsy_0625 translation initiation factor IF-1~PFAM: RNA-binding domain, S1, IF1 type inference protein motif:HAMAP:MF_00075 db_xref InterPro:IPR004368 db_xref InterPro:IPR006196 763279 762626 gene locus_tag Alide2_0730 763279 762626 CDS product 2OG-Fe(II) oxygenase transl_table 11 protein_id gb|AEB83146.1||gnl|jgi|Alide2_0730 note PFAM: Oxoglutarate/iron-dependent oxygenase~KEGG: dia:Dtpsy_0631 2OG-Fe(II) oxygenase inference protein motif:PFAM:PF03171 db_xref GO:0016491 db_xref InterPro:IPR005123 763370 764878 gene locus_tag Alide2_0731 763370 764878 CDS product o-succinylbenzoate--CoA ligase EC_number 6.2.1.26 transl_table 11 protein_id gb|AEB83147.1||gnl|jgi|Alide2_0731 note KEGG: ajs:Ajs_0653 AMP-dependent synthetase and ligase~PFAM: AMP-dependent synthetase/ligase inference protein motif:PRIAM:6.2.1.26 db_xref InterPro:IPR000873 764975 765694 gene locus_tag Alide2_0732 764975 765694 CDS product oxidoreductase FAD/NAD(P)-binding domain protein transl_table 11 protein_id gb|AEB83148.1||gnl|jgi|Alide2_0732 note PFAM: Oxidoreductase FAD/NAD(P)-binding; Oxidoreductase, FAD-binding domain~KEGG: ctt:CtCNB1_2425 FAD-binding oxidoreductase inference protein motif:PFAM:PF00175 db_xref GO:0016491 db_xref InterPro:IPR001433 db_xref InterPro:IPR008333 767277 765688 gene locus_tag Alide2_0733 767277 765688 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83149.1||gnl|jgi|Alide2_0733 note KEGG: vap:Vapar_3422 hypothetical protein inference similar to AA sequence:KEGG:Vapar_3422 767897 767289 gene locus_tag Alide2_0734 767897 767289 CDS product peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin transl_table 11 protein_id gb|AEB83150.1||gnl|jgi|Alide2_0734 note PFAM: Peptidase M15B/M15C, D,D-carboxypeptidase VanY/endolysins; Peptidoglycan binding-like~KEGG: pph:Ppha_2260 peptidase M15B and M15C dd-carboxypeptidase VanY/endolysin inference protein motif:PFAM:PF02557 db_xref GO:0008233 db_xref InterPro:IPR002477 db_xref InterPro:IPR003709 768068 768739 gene locus_tag Alide2_0735 768068 768739 CDS product DSBA oxidoreductase transl_table 11 protein_id gb|AEB83151.1||gnl|jgi|Alide2_0735 note PFAM: DSBA-like thioredoxin domain~KEGG: ajs:Ajs_0654 DsbA oxidoreductase inference protein motif:PFAM:PF01323 db_xref GO:0015035 db_xref InterPro:IPR001853 769293 768811 gene locus_tag Alide2_0736 769293 768811 CDS product CreA family protein transl_table 11 protein_id gb|AEB83152.1||gnl|jgi|Alide2_0736 note PFAM: Uncharacterised protein family CreA~KEGG: dia:Dtpsy_0634 CreA family protein inference protein motif:PFAM:PF05981 db_xref InterPro:IPR010292 771881 769290 gene locus_tag Alide2_0737 771881 769290 CDS product cyanophycin synthetase EC_number 6.3.2.29 transl_table 11 protein_id gb|AEB83153.1||gnl|jgi|Alide2_0737 note TIGRFAM: Cyanophycin synthetase~KEGG: dia:Dtpsy_0635 cyanophycin synthetase~PFAM: Mur ligase, central; ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type; Mur ligase, C-terminal inference protein motif:TFAM:TIGR02068 db_xref GO:0005524 db_xref GO:0016874 db_xref InterPro:IPR003135 db_xref InterPro:IPR004101 db_xref InterPro:IPR011810 db_xref InterPro:IPR013221 774133 771953 gene locus_tag Alide2_0738 774133 771953 CDS product cyanophycin synthetase EC_number 6.3.2.29 transl_table 11 protein_id gb|AEB83154.1||gnl|jgi|Alide2_0738 note TIGRFAM: Cyanophycin synthetase~KEGG: ctt:CtCNB1_0610 cyanophycin synthetase~PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding inference protein motif:TFAM:TIGR02068 db_xref GO:0005524 db_xref GO:0016874 db_xref InterPro:IPR005479 db_xref InterPro:IPR011810 774383 776695 gene locus_tag Alide2_0739 774383 776695 CDS product Xenobiotic-transporting ATPase EC_number 3.6.3.44 transl_table 11 protein_id gb|AEB83155.1||gnl|jgi|Alide2_0739 note PFAM: ABC transporter-like; ABC transporter, transmembrane domain~KEGG: dia:Dtpsy_0637 ABC transporter related~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.44 db_xref InterPro:IPR001140 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 776710 777198 gene locus_tag Alide2_0740 776710 777198 CDS product Domain of unknown function DUF1854 transl_table 11 protein_id gb|AEB83156.1||gnl|jgi|Alide2_0740 note PFAM: Domain of unknown function DUF1854~KEGG: dia:Dtpsy_0638 hypothetical protein inference protein motif:PFAM:PF08909 db_xref InterPro:IPR015005 777339 777779 gene locus_tag Alide2_0741 777339 777779 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83157.1||gnl|jgi|Alide2_0741 note KEGG: dia:Dtpsy_0639 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_0639 777903 779957 gene locus_tag Alide2_0742 777903 779957 CDS product small GTP-binding protein transl_table 11 protein_id gb|AEB83158.1||gnl|jgi|Alide2_0742 note TIGRFAM: Small GTP-binding protein~PFAM: Translation elongation factor EFG/EF2, domain IV; Protein synthesis factor, GTP-binding; Translation elongation factor EFG/EF2, C-terminal~KEGG: vap:Vapar_5542 elongation factor G~SMART: Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFG/EF2, C-terminal inference protein motif:TFAM:TIGR00231 db_xref GO:0005525 db_xref InterPro:IPR000640 db_xref InterPro:IPR000795 db_xref InterPro:IPR005225 db_xref InterPro:IPR005517 780903 779971 gene locus_tag Alide2_0743 780903 779971 CDS product 5'-nucleotidase EC_number 3.1.3.5 transl_table 11 protein_id gb|AEB83159.1||gnl|jgi|Alide2_0743 note KEGG: vei:Veis_1630 5-nucleotidase~PFAM: 5-nucleotidase inference protein motif:PRIAM:3.1.3.5 db_xref InterPro:IPR010394 782137 780908 gene locus_tag Alide2_0744 782137 780908 CDS product general secretion pathway protein F transl_table 11 protein_id gb|AEB83160.1||gnl|jgi|Alide2_0744 note KEGG: dia:Dtpsy_0642 general secretion pathway protein F~TIGRFAM: General secretion pathway protein F~PFAM: Type II secretion system F domain inference protein motif:TFAM:TIGR02120 db_xref GO:0008565 db_xref InterPro:IPR011850 db_xref InterPro:IPR018076 783187 782192 gene locus_tag Alide2_0745 783187 782192 CDS product luciferase family oxidoreductase, group 1 transl_table 11 protein_id gb|AEB83161.1||gnl|jgi|Alide2_0745 note KEGG: ajs:Ajs_0664 luciferase family protein~TIGRFAM: Luciferase family oxidoreductase, group 1~PFAM: Luciferase-like, subgroup inference protein motif:TFAM:TIGR03558 db_xref InterPro:IPR016048 db_xref InterPro:IPR019949 783376 783903 gene locus_tag Alide2_0746 783376 783903 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83162.1||gnl|jgi|Alide2_0746 note KEGG: ajs:Ajs_0665 hypothetical protein inference similar to AA sequence:KEGG:Ajs_0665 785313 783913 gene locus_tag Alide2_0747 785313 783913 CDS product general secretory pathway protein E transl_table 11 protein_id gb|AEB83163.1||gnl|jgi|Alide2_0747 note TIGRFAM: Type II secretion system GspE~PFAM: Type II secretion system protein E~KEGG: dia:Dtpsy_0645 general secretory pathway protein E~SMART: ATPase, AAA+ type, core inference protein motif:TFAM:TIGR02533 db_xref GO:0005524 db_xref GO:0008565 db_xref InterPro:IPR001482 db_xref InterPro:IPR003593 db_xref InterPro:IPR013369 787657 785324 gene locus_tag Alide2_0748 787657 785324 CDS product general secretion pathway protein D transl_table 11 protein_id gb|AEB83164.1||gnl|jgi|Alide2_0748 note KEGG: dia:Dtpsy_0646 general secretion pathway protein D~TIGRFAM: Type II secretion system GspD~PFAM: Type II/III secretion system; NolW-like inference protein motif:TFAM:TIGR02517 db_xref GO:0008565 db_xref InterPro:IPR004846 db_xref InterPro:IPR005644 db_xref InterPro:IPR013356 788477 787662 gene locus_tag Alide2_0749 788477 787662 CDS product putative general secretory pathway N transmembrane protein transl_table 11 protein_id gb|AEB83165.1||gnl|jgi|Alide2_0749 note KEGG: ajs:Ajs_0668 putative general secretory pathway N transmembrane protein inference similar to AA sequence:KEGG:Ajs_0668 789020 788511 gene locus_tag Alide2_0750 789020 788511 CDS product General secretion pathway M protein transl_table 11 protein_id gb|AEB83166.1||gnl|jgi|Alide2_0750 note PFAM: General secretion pathway M protein~KEGG: ajs:Ajs_0669 hypothetical protein inference protein motif:PFAM:PF04612 db_xref InterPro:IPR007690 790249 789017 gene locus_tag Alide2_0751 790249 789017 CDS product General secretion pathway L transl_table 11 protein_id gb|AEB83167.1||gnl|jgi|Alide2_0751 note PFAM: General secretion pathway L~KEGG: ajs:Ajs_0670 general secretion pathway L inference protein motif:PFAM:PF05134 db_xref GO:0008565 db_xref InterPro:IPR007812 791294 790317 gene locus_tag Alide2_0752 791294 790317 CDS product general secretion pathway protein K transl_table 11 protein_id gb|AEB83168.1||gnl|jgi|Alide2_0752 note KEGG: ajs:Ajs_0671 general secretion pathway protein K inference similar to AA sequence:KEGG:Ajs_0671 db_xref InterPro:IPR005628 791980 791291 gene locus_tag Alide2_0753 791980 791291 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83169.1||gnl|jgi|Alide2_0753 note KEGG: ajs:Ajs_0672 hypothetical protein inference similar to AA sequence:KEGG:Ajs_0672 db_xref InterPro:IPR012902 792347 791982 gene locus_tag Alide2_0754 792347 791982 CDS product general secretion pathway protein I transl_table 11 protein_id gb|AEB83170.1||gnl|jgi|Alide2_0754 note KEGG: dia:Dtpsy_0652 general secretion pathway protein I~TIGRFAM: General secretion pathway protein I; Prepilin-type cleavage/methylation, N-terminal~PFAM: Type II secretion system protein I/J; Prepilin-type cleavage/methylation, N-terminal inference protein motif:TFAM:TIGR01707 db_xref GO:0008565 db_xref InterPro:IPR003413 db_xref InterPro:IPR010052 db_xref InterPro:IPR012902 793080 792616 gene locus_tag Alide2_0755 793080 792616 CDS product general secretion pathway protein H transl_table 11 protein_id gb|AEB83171.1||gnl|jgi|Alide2_0755 note KEGG: dia:Dtpsy_0653 general secretion pathway protein H~manually curated~TIGRFAM: Bacterial general secretion pathway protein H; Prepilin-type cleavage/methylation, N-terminal inference protein motif:TFAM:TIGR01708 db_xref GO:0008565 db_xref InterPro:IPR002416 db_xref InterPro:IPR012902 793560 793153 gene locus_tag Alide2_0756 793560 793153 CDS product general secretion pathway protein G transl_table 11 protein_id gb|AEB83172.1||gnl|jgi|Alide2_0756 note KEGG: aav:Aave_0925 general secretion pathway protein G~TIGRFAM: General secretion pathway protein G; Prepilin-type cleavage/methylation, N-terminal~PFAM: Type II secretion system protein G; Prepilin-type cleavage/methylation, N-terminal inference protein motif:TFAM:TIGR01710 db_xref GO:0008565 db_xref InterPro:IPR010054 db_xref InterPro:IPR012902 db_xref InterPro:IPR013545 793661 794107 gene locus_tag Alide2_0757 793661 794107 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83173.1||gnl|jgi|Alide2_0757 note KEGG: dia:Dtpsy_0655 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_0655 794674 794108 gene locus_tag Alide2_0758 794674 794108 CDS product Phosphoglycerate mutase transl_table 11 protein_id gb|AEB83174.1||gnl|jgi|Alide2_0758 note KEGG: dia:Dtpsy_0656 phosphoglycerate mutase~PFAM: Histidine phosphatase superfamily, clade-1~SMART: Histidine phosphatase superfamily, clade-1 inference protein motif:PFAM:PF00300 db_xref InterPro:IPR013078 795489 794671 gene locus_tag Alide2_0759 795489 794671 CDS product cobalamin-5-phosphate synthase CobS transl_table 11 protein_id gb|AEB83175.1||gnl|jgi|Alide2_0759 note PFAM: Cobalamin (vitamin B12) biosynthesis CobS, cobalamin-5-phosphate synthase~KEGG: dia:Dtpsy_0657 cobalamin-5-phosphate synthase CobS inference protein motif:PFAM:PF02654 db_xref GO:0008818 db_xref InterPro:IPR003805 797117 795552 gene locus_tag Alide2_0760 797117 795552 CDS product threonine dehydratase, biosynthetic transl_table 11 protein_id gb|AEB83176.1||gnl|jgi|Alide2_0760 note KEGG: dia:Dtpsy_0658 threonine dehydratase~TIGRFAM: Threonine dehydratase I~PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; Threonine dehydratase, C-terminal inference protein motif:TFAM:TIGR01124 db_xref GO:0004794 db_xref InterPro:IPR001721 db_xref InterPro:IPR001926 db_xref InterPro:IPR005787 797399 797848 gene locus_tag Alide2_0761 797399 797848 CDS product OsmC family protein transl_table 11 protein_id gb|AEB83177.1||gnl|jgi|Alide2_0761 note PFAM: Peroxiredoxin, OsmC-like protein~KEGG: dia:Dtpsy_0659 OsmC family protein inference protein motif:PFAM:PF02566 db_xref InterPro:IPR003718 798476 797859 gene locus_tag Alide2_0762 798476 797859 CDS product putative ubiquinone biosynthesis protein transl_table 11 protein_id gb|AEB83178.1||gnl|jgi|Alide2_0762 note KEGG: dia:Dtpsy_0660 putative ubiquinone biosynthesis protein inference similar to AA sequence:KEGG:Dtpsy_0660 798705 799745 gene locus_tag Alide2_0763 798705 799745 CDS product porin transl_table 11 protein_id gb|AEB83179.1||gnl|jgi|Alide2_0763 note KEGG: aav:Aave_0932 porin inference similar to AA sequence:KEGG:Aave_0932 799967 801178 gene locus_tag Alide2_0764 799967 801178 CDS product porin Gram-negative type transl_table 11 protein_id gb|AEB83180.1||gnl|jgi|Alide2_0764 note PFAM: Porin, Gram-negative type~KEGG: dia:Dtpsy_0662 porin gram-negative type inference protein motif:PFAM:PF00267 db_xref GO:0005215 db_xref InterPro:IPR001702 801427 802410 gene locus_tag Alide2_0765 801427 802410 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB83181.1||gnl|jgi|Alide2_0765 note PFAM: Binding-protein-dependent transport systems inner membrane component~KEGG: dia:Dtpsy_0664 binding-protein-dependent transport systems inner membrane component inference protein motif:PFAM:PF00528 db_xref GO:0005215 db_xref InterPro:IPR000515 802412 803632 gene locus_tag Alide2_0766 802412 803632 CDS product amidohydrolase EC_number 3.5.1.32 transl_table 11 protein_id gb|AEB83182.1||gnl|jgi|Alide2_0766 note TIGRFAM: Peptidase M20D, amidohydrolase~KEGG: dia:Dtpsy_0665 amidohydrolase~PFAM: Peptidase M20; Peptidase M20, dimerisation inference protein motif:TFAM:TIGR01891 db_xref GO:0016787 db_xref InterPro:IPR002933 db_xref InterPro:IPR010168 db_xref InterPro:IPR011650 803710 804621 gene locus_tag Alide2_0767 803710 804621 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB83183.1||gnl|jgi|Alide2_0767 note PFAM: Binding-protein-dependent transport systems inner membrane component~KEGG: dia:Dtpsy_0667 binding-protein-dependent transport systems inner membrane component inference protein motif:PFAM:PF00528 db_xref GO:0005215 db_xref InterPro:IPR000515 804628 805602 gene locus_tag Alide2_0768 804628 805602 CDS product oligopeptide/dipeptide ABC transporter, ATPase subunit EC_number 3.6.3.24 transl_table 11 protein_id gb|AEB83184.1||gnl|jgi|Alide2_0768 note SMART: ATPase, AAA+ type, core~TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal~KEGG: dia:Dtpsy_0668 oligopeptide/dipeptide ABC transporter, ATPase subunit~PFAM: Oligopeptide/dipeptide ABC transporter, C-terminal; ABC transporter-like inference protein motif:TFAM:TIGR01727 db_xref GO:0005524 db_xref GO:0015197 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 db_xref InterPro:IPR010066 db_xref InterPro:IPR013563 805599 806615 gene locus_tag Alide2_0769 805599 806615 CDS product oligopeptide/dipeptide ABC transporter, ATPase subunit EC_number 3.6.3.24 transl_table 11 protein_id gb|AEB83185.1||gnl|jgi|Alide2_0769 note SMART: ATPase, AAA+ type, core~TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal~KEGG: dia:Dtpsy_0669 oligopeptide/dipeptide ABC transporter, ATPase subunit~PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal inference protein motif:TFAM:TIGR01727 db_xref GO:0005524 db_xref GO:0015197 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 db_xref InterPro:IPR010066 db_xref InterPro:IPR013563 806658 807152 gene locus_tag Alide2_0770 806658 807152 CDS product YbhB YbcL family protein transl_table 11 protein_id gb|AEB83186.1||gnl|jgi|Alide2_0770 note KEGG: dia:Dtpsy_0671 PEBP family protein~TIGRFAM: YbhB/YbcL~PFAM: Phosphatidylethanolamine-binding protein PEBP inference protein motif:TFAM:TIGR00481 db_xref InterPro:IPR005247 db_xref InterPro:IPR008914 808049 807204 gene locus_tag Alide2_0771 808049 807204 CDS product transcriptional regulator, RpiR family transl_table 11 protein_id gb|AEB83187.1||gnl|jgi|Alide2_0771 note PFAM: Helix-turn-helix protein RpiR; Sugar isomerase (SIS)~KEGG: ajs:Ajs_0694 RpiR family transcriptional regulator inference protein motif:PFAM:PF01418 db_xref GO:0003700 db_xref GO:0005529 db_xref InterPro:IPR000281 db_xref InterPro:IPR001347 808165 809115 gene locus_tag Alide2_0772 808165 809115 CDS product transaldolase transl_table 11 protein_id gb|AEB83188.1||gnl|jgi|Alide2_0772 note KEGG: dia:Dtpsy_0674 transaldolase B~TIGRFAM: Transaldolase 1~PFAM: Transaldolase inference protein motif:TFAM:TIGR00874 db_xref GO:0004801 db_xref InterPro:IPR001585 db_xref InterPro:IPR004730 809112 810707 gene locus_tag Alide2_0773 809112 810707 CDS product Glucose-6-phosphate isomerase EC_number 5.3.1.9 transl_table 11 protein_id gb|AEB83189.1||gnl|jgi|Alide2_0773 note KEGG: ajs:Ajs_0697 glucose-6-phosphate isomerase~PFAM: Phosphoglucose isomerase (PGI) inference protein motif:PRIAM:5.3.1.9 db_xref InterPro:IPR001672 812476 810830 gene locus_tag Alide2_0774 812476 810830 CDS product chaperonin GroEL transl_table 11 protein_id gb|AEB83190.1||gnl|jgi|Alide2_0774 note KEGG: aav:Aave_0945 chaperonin GroEL~TIGRFAM: Chaperonin Cpn60~PFAM: Chaperonin Cpn60/TCP-1 inference protein motif:TFAM:TIGR02348 db_xref InterPro:IPR001844 db_xref InterPro:IPR002423 812864 812574 gene locus_tag Alide2_0775 812864 812574 CDS product Chaperonin Cpn10 transl_table 11 protein_id gb|AEB83191.1||gnl|jgi|Alide2_0775 note KEGG: dac:Daci_5660 co-chaperonin GroES~PFAM: Chaperonin Cpn10~SMART: Chaperonin Cpn10 inference protein motif:PFAM:PF00166 db_xref InterPro:IPR020818 814094 813066 gene locus_tag Alide2_0776 814094 813066 CDS product cytidyltransferase-related domain protein transl_table 11 protein_id gb|AEB83192.1||gnl|jgi|Alide2_0776 note KEGG: ajs:Ajs_0701 cytidyltransferase-like protein~TIGRFAM: Cytidyltransferase-related~PFAM: NUDIX hydrolase domain; Cytidylyltransferase inference protein motif:TFAM:TIGR00125 db_xref GO:0003824 db_xref InterPro:IPR000086 db_xref InterPro:IPR004820 db_xref InterPro:IPR004821 815289 814108 gene locus_tag Alide2_0777 815289 814108 CDS product S-adenosylmethionine synthetase EC_number 2.5.1.6 transl_table 11 protein_id gb|AEB83193.1||gnl|jgi|Alide2_0777 note TIGRFAM: S-adenosylmethionine synthetase~KEGG: dia:Dtpsy_0683 S-adenosylmethionine synthetase~PFAM: S-adenosylmethionine synthetase, C-terminal; S-adenosylmethionine synthetase, central domain; S-adenosylmethionine synthetase, N-terminal inference protein motif:TFAM:TIGR01034 db_xref GO:0004478 db_xref GO:0005524 db_xref InterPro:IPR002133 db_xref InterPro:IPR022628 db_xref InterPro:IPR022629 db_xref InterPro:IPR022630 815423 816277 gene locus_tag Alide2_0778 815423 816277 CDS product lipid A biosynthesis acyltransferase transl_table 11 protein_id gb|AEB83194.1||gnl|jgi|Alide2_0778 note PFAM: Bacterial lipid A biosynthesis acyltransferase~KEGG: ajs:Ajs_0706 lipid A biosynthesis acyltransferase inference protein motif:PFAM:PF03279 db_xref GO:0008415 db_xref InterPro:IPR004960 816274 817155 gene locus_tag Alide2_0779 816274 817155 CDS product lipid A biosynthesis acyltransferase transl_table 11 protein_id gb|AEB83195.1||gnl|jgi|Alide2_0779 note PFAM: Bacterial lipid A biosynthesis acyltransferase~KEGG: ajs:Ajs_0707 lipid A biosynthesis acyltransferase inference protein motif:PFAM:PF03279 db_xref GO:0008415 db_xref InterPro:IPR004960 818098 817196 gene locus_tag Alide2_0780 818098 817196 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB83196.1||gnl|jgi|Alide2_0780 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: vei:Veis_1352 LysR family transcriptional regulator inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 818195 819175 gene locus_tag Alide2_0781 818195 819175 CDS product fis family transcriptional regulator transl_table 11 protein_id gb|AEB83197.1||gnl|jgi|Alide2_0781 note KEGG: vei:Veis_1351 fis family transcriptional regulator inference similar to AA sequence:KEGG:Veis_1351 db_xref InterPro:IPR005064 819190 820170 gene locus_tag Alide2_0782 819190 820170 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83198.1||gnl|jgi|Alide2_0782 note KEGG: cti:RALTA_B1946 conserved hypothetical protein UPF0065 inference similar to AA sequence:KEGG:RALTA_B1946 db_xref InterPro:IPR005064 db_xref InterPro:IPR006311 820197 821258 gene locus_tag Alide2_0783 820197 821258 CDS product 3-isopropylmalate dehydrogenase EC_number 1.1.1.85 transl_table 11 protein_id gb|AEB83199.1||gnl|jgi|Alide2_0783 note KEGG: vei:Veis_1349 3-isopropylmalate dehydrogenase~PFAM: Isocitrate/isopropylmalate dehydrogenase inference protein motif:PRIAM:1.1.1.85 db_xref InterPro:IPR001804 821258 822079 gene locus_tag Alide2_0784 821258 822079 CDS product amidohydrolase 2 transl_table 11 protein_id gb|AEB83200.1||gnl|jgi|Alide2_0784 note PFAM: Amidohydrolase 2~KEGG: bbt:BBta_3003 hypothetical protein inference protein motif:PFAM:PF04909 db_xref GO:0003824 db_xref InterPro:IPR006992 822759 822067 gene locus_tag Alide2_0785 822759 822067 CDS product GTP-binding protein engB transl_table 11 protein_id gb|AEB83201.1||gnl|jgi|Alide2_0785 note TIGRFAM: GTP-binding protein, ribosome biogenesis, YsxC~HAMAP: GTP-binding protein, ribosome biogenesis, YsxC~KEGG: aav:Aave_0983 ribosome biogenesis GTP-binding protein YsxC~PFAM: GTP-binding protein, HSR1-related inference protein motif:HAMAP:MF_00321 db_xref InterPro:IPR002917 db_xref InterPro:IPR019987 822842 823480 gene locus_tag Alide2_0786 822842 823480 CDS product cytochrome c class I transl_table 11 protein_id gb|AEB83202.1||gnl|jgi|Alide2_0786 note PFAM: Cytochrome c, class I~KEGG: ajs:Ajs_0710 cytochrome c, class I inference protein motif:PFAM:PF00034 db_xref GO:0005506 db_xref GO:0009055 db_xref GO:0020037 db_xref InterPro:IPR003088 823609 825807 gene locus_tag Alide2_0787 823609 825807 CDS product ResB family protein transl_table 11 protein_id gb|AEB83203.1||gnl|jgi|Alide2_0787 note PFAM: Cytochrome c biogenesis protein~KEGG: dia:Dtpsy_0691 ResB family protein inference protein motif:PFAM:PF05140 db_xref InterPro:IPR007816 825804 827138 gene locus_tag Alide2_0788 825804 827138 CDS product cytochrome c-type biogenesis protein CcsB transl_table 11 protein_id gb|AEB83204.1||gnl|jgi|Alide2_0788 note KEGG: ajs:Ajs_0712 cytochrome c assembly protein~TIGRFAM: Cytochrome c-type biogenesis protein CcsA~PFAM: Cytochrome c assembly protein inference protein motif:TFAM:TIGR03144 db_xref InterPro:IPR002541 db_xref InterPro:IPR017562 827312 828310 gene locus_tag Alide2_0789 827312 828310 CDS product oxidoreductase molybdopterin binding protein transl_table 11 protein_id gb|AEB83205.1||gnl|jgi|Alide2_0789 note PFAM: Oxidoreductase, molybdopterin-binding domain~KEGG: dia:Dtpsy_0693 putative sulfite oxidase subunit YedY inference protein motif:PFAM:PF00174 db_xref GO:0009055 db_xref InterPro:IPR000572 828310 828951 gene locus_tag Alide2_0790 828310 828951 CDS product Sulfoxide reductase heme-binding subunit yedZ transl_table 11 protein_id gb|AEB83206.1||gnl|jgi|Alide2_0790 note KEGG: dia:Dtpsy_0694 ferric reductase domain protein transmembrane component~HAMAP: Sulphoxide reductase heme-binding subunit YedZ~PFAM: Flavoprotein transmembrane component inference protein motif:HAMAP:MF_01207 db_xref InterPro:IPR013130 db_xref InterPro:IPR022837 829840 829037 gene locus_tag Alide2_0791 829840 829037 CDS product beta-lactamase domain protein transl_table 11 protein_id gb|AEB83207.1||gnl|jgi|Alide2_0791 note KEGG: dia:Dtpsy_0695 beta-lactamase domain protein~PFAM: Beta-lactamase-like~SMART: Beta-lactamase-like inference protein motif:PFAM:PF00753 db_xref GO:0016787 db_xref InterPro:IPR001279 831198 829909 gene locus_tag Alide2_0792 831198 829909 CDS product diaminopimelate decarboxylase EC_number 4.1.1.20 transl_table 11 protein_id gb|AEB83208.1||gnl|jgi|Alide2_0792 note TIGRFAM: Diaminopimelate decarboxylase~KEGG: dia:Dtpsy_0696 diaminopimelate decarboxylase~PFAM: Orn/DAP/Arg decarboxylase 2, N-terminal; Orn/DAP/Arg decarboxylase 2, C-terminal inference protein motif:TFAM:TIGR01048 db_xref GO:0008836 db_xref InterPro:IPR002986 db_xref InterPro:IPR022643 db_xref InterPro:IPR022644 831407 831195 gene locus_tag Alide2_0793 831407 831195 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83209.1||gnl|jgi|Alide2_0793 note manually curated~KEGG: ajs:Ajs_0717 hypothetical protein inference similar to AA sequence:KEGG:Ajs_0717 831420 831749 gene locus_tag Alide2_0794 831420 831749 CDS product Protein cyaY transl_table 11 protein_id gb|AEB83210.1||gnl|jgi|Alide2_0794 note TIGRFAM: Frataxin-like~HAMAP: Frataxin-like~KEGG: ajs:Ajs_0728 frataxin family protein~PFAM: Frataxin-like inference protein motif:HAMAP:MF_00142 db_xref InterPro:IPR002908 834071 831756 gene locus_tag Alide2_0795 834071 831756 CDS product penicillin-binding protein, 1A family transl_table 11 protein_id gb|AEB83211.1||gnl|jgi|Alide2_0795 note KEGG: dia:Dtpsy_0698 penicillin-binding protein, 1A family~TIGRFAM: Penicillin-binding protein 1A~PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase inference protein motif:TFAM:TIGR02074 db_xref GO:0008233 db_xref InterPro:IPR001264 db_xref InterPro:IPR001460 db_xref InterPro:IPR011816 834398 835468 gene locus_tag Alide2_0796 834398 835468 CDS product type IV pilus assembly protein PilM transl_table 11 protein_id gb|AEB83212.1||gnl|jgi|Alide2_0796 note TIGRFAM: Type IV pilus assembly protein PilM~KEGG: ajs:Ajs_0730 type IV pilus assembly protein PilM inference protein motif:TFAM:TIGR01175 db_xref InterPro:IPR005883 835465 836076 gene locus_tag Alide2_0797 835465 836076 CDS product Fimbrial assembly family protein transl_table 11 protein_id gb|AEB83213.1||gnl|jgi|Alide2_0797 note PFAM: Fimbrial assembly~KEGG: ajs:Ajs_0731 fimbrial assembly family protein inference protein motif:PFAM:PF05137 db_xref InterPro:IPR007813 836073 836756 gene locus_tag Alide2_0798 836073 836756 CDS product pilus assembly protein, PilO transl_table 11 protein_id gb|AEB83214.1||gnl|jgi|Alide2_0798 note KEGG: ajs:Ajs_0732 pilus assembly protein, PilO inference similar to AA sequence:KEGG:Ajs_0732 836753 837310 gene locus_tag Alide2_0799 836753 837310 CDS product Pilus assembly protein PilP transl_table 11 protein_id gb|AEB83215.1||gnl|jgi|Alide2_0799 note PFAM: Pilus assembly protein PilP~KEGG: dia:Dtpsy_0702 pilus assembly protein PilP inference protein motif:PFAM:PF04351 db_xref InterPro:IPR007446 837307 839448 gene locus_tag Alide2_0800 837307 839448 CDS product type IV pilus secretin PilQ transl_table 11 protein_id gb|AEB83216.1||gnl|jgi|Alide2_0800 note TIGRFAM: Type IV pilus secretin PilQ~PFAM: Type II/III secretion system; NolW-like; Secretin/TonB, short N-terminal~KEGG: dia:Dtpsy_0703 type IV pilus secretin PilQ~SMART: Secretin/TonB, short N-terminal inference protein motif:TFAM:TIGR02515 db_xref InterPro:IPR004846 db_xref InterPro:IPR005644 db_xref InterPro:IPR011662 db_xref InterPro:IPR013355 839470 841017 gene locus_tag Alide2_0801 839470 841017 CDS product Ig family protein transl_table 11 protein_id gb|AEB83217.1||gnl|jgi|Alide2_0801 note PFAM: Putative Ig~KEGG: eba:ebA2288 hypothetical protein inference protein motif:PFAM:PF05345 db_xref InterPro:IPR008009 841141 842259 gene locus_tag Alide2_0802 841141 842259 CDS product 3-dehydroquinate synthase EC_number 4.2.3.4 transl_table 11 protein_id gb|AEB83218.1||gnl|jgi|Alide2_0802 note PFAM: 3-dehydroquinate synthase AroB~TIGRFAM: 3-dehydroquinate synthase AroB, subgroup~HAMAP: 3-dehydroquinate synthase AroB, subgroup~KEGG: dia:Dtpsy_0704 3-dehydroquinate synthase inference protein motif:HAMAP:MF_00110 db_xref InterPro:IPR002658 db_xref InterPro:IPR016037 842317 843489 gene locus_tag Alide2_0803 842317 843489 CDS product Deoxyguanosinetriphosphate triphosphohydrolase-like protein transl_table 11 protein_id gb|AEB83219.1||gnl|jgi|Alide2_0803 note SMART: Metal-dependent phosphohydrolase, HD domain~TIGRFAM: Deoxyguanosinetriphosphate triphosphohydrolase~KEGG: ajs:Ajs_0736 deoxyguanosinetriphosphate triphosphohydrolase-like protein~HAMAP: Deoxyguanosinetriphosphate triphosphohydrolase, type 2~PFAM: Metal-dependent phosphohydrolase, HD subdomain inference protein motif:HAMAP:MF_01212 db_xref InterPro:IPR003607 db_xref InterPro:IPR006261 db_xref InterPro:IPR006674 db_xref InterPro:IPR023023 843521 844141 gene locus_tag Alide2_0804 843521 844141 CDS product protein of unknown function DUF1415 transl_table 11 protein_id gb|AEB83220.1||gnl|jgi|Alide2_0804 note PFAM: Protein of unknown function DUF1415~KEGG: dia:Dtpsy_0706 protein of unknown function DUF1415 inference protein motif:PFAM:PF07209 db_xref InterPro:IPR009858 844138 845010 gene locus_tag Alide2_0805 844138 845010 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83221.1||gnl|jgi|Alide2_0805 note KEGG: dia:Dtpsy_0707 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_0707 846631 845126 gene locus_tag Alide2_0806 846631 845126 CDS product methylmalonate-semialdehyde dehydrogenase EC_number 1.2.1.27 transl_table 11 protein_id gb|AEB83222.1||gnl|jgi|Alide2_0806 note TIGRFAM: Methylmalonate-semialdehyde dehydrogenase~KEGG: xtr:100496453 methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial-like~PFAM: Aldehyde dehydrogenase domain inference protein motif:TFAM:TIGR01722 db_xref GO:0004491 db_xref InterPro:IPR010061 db_xref InterPro:IPR015590 847863 846646 gene locus_tag Alide2_0807 847863 846646 CDS product branched-chain amino acid ABC transporter periplasmic protein transl_table 11 protein_id gb|AEB83223.1||gnl|jgi|Alide2_0807 note KEGG: hse:Hsero_3068 branched-chain amino acid ABC transporter periplasmic protein inference similar to AA sequence:KEGG:Hsero_3068 847997 848922 gene locus_tag Alide2_0808 pseudo 848989 849699 gene locus_tag Alide2_0809 848989 849699 CDS product transposase IS200-family protein transl_table 11 protein_id gb|AEB83224.1||gnl|jgi|Alide2_0809 note PFAM: Transposase IS200-like~KEGG: vap:Vapar_1151 protein of unknown function DUF1568 inference protein motif:PFAM:PF01797 db_xref GO:0003677 db_xref GO:0004803 db_xref InterPro:IPR002686 849869 854602 gene locus_tag Alide2_0810 849869 854602 CDS product Glutamate synthase (ferredoxin) EC_number 1.4.7.1 transl_table 11 protein_id gb|AEB83225.1||gnl|jgi|Alide2_0810 note KEGG: ajs:Ajs_0741 glutamate synthase (NADH) large subunit~PFAM: Glutamate synthase, central-C; Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal inference protein motif:PRIAM:1.4.7.1 db_xref InterPro:IPR000583 db_xref InterPro:IPR002489 db_xref InterPro:IPR002932 db_xref InterPro:IPR006982 854643 856121 gene locus_tag Alide2_0811 854643 856121 CDS product glutamate synthase, NADH/NADPH, small subunit EC_number 1.4.1.14 transl_table 11 protein_id gb|AEB83226.1||gnl|jgi|Alide2_0811 note TIGRFAM: Glutamate synthase, NADH/NADPH, small subunit 1~KEGG: dia:Dtpsy_0710 glutamate synthase subunit beta~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region inference protein motif:TFAM:TIGR01317 db_xref GO:0050660 db_xref InterPro:IPR001327 db_xref InterPro:IPR006005 db_xref InterPro:IPR013027 856326 857123 gene locus_tag Alide2_0812 856326 857123 CDS product ABC-type transporter, periplasmic subunit family 3 transl_table 11 protein_id gb|AEB83227.1||gnl|jgi|Alide2_0812 note KEGG: ajs:Ajs_0743 extracellular solute-binding protein~PFAM: Extracellular solute-binding protein, family 3~SMART: Extracellular solute-binding protein, family 3 inference protein motif:PFAM:PF00497 db_xref GO:0005215 db_xref InterPro:IPR001638 857185 857841 gene locus_tag Alide2_0813 857185 857841 CDS product polar amino acid ABC transporter, inner membrane subunit transl_table 11 protein_id gb|AEB83228.1||gnl|jgi|Alide2_0813 note KEGG: ajs:Ajs_0744 polar amino acid ABC transporter, inner membrane subunit~TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family~PFAM: Binding-protein-dependent transport systems inner membrane component inference protein motif:TFAM:TIGR01726 db_xref GO:0005215 db_xref InterPro:IPR000515 db_xref InterPro:IPR010065 857822 858601 gene locus_tag Alide2_0814 857822 858601 CDS product Phosphonate-transporting ATPase EC_number 3.6.3.28 transl_table 11 protein_id gb|AEB83229.1||gnl|jgi|Alide2_0814 note PFAM: ABC transporter-like~KEGG: dia:Dtpsy_0713 ABC transporter related~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.28 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 858625 859929 gene locus_tag Alide2_0815 858625 859929 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83230.1||gnl|jgi|Alide2_0815 note KEGG: vei:Veis_4017 hypothetical protein inference similar to AA sequence:KEGG:Veis_4017 860990 860031 gene locus_tag Alide2_0816 860990 860031 CDS product Spermidine synthase EC_number 2.5.1.16 transl_table 11 protein_id gb|AEB83231.1||gnl|jgi|Alide2_0816 note HAMAP: Spermine synthase~KEGG: ajs:Ajs_0746 spermidine synthase~PFAM: Spermine synthase inference protein motif:HAMAP:MF_00198 db_xref InterPro:IPR001045 861400 860990 gene locus_tag Alide2_0817 861400 860990 CDS product S-adenosylmethionine decarboxylase proenzyme transl_table 11 protein_id gb|AEB83232.1||gnl|jgi|Alide2_0817 note KEGG: dia:Dtpsy_0715 S-adenosylmethionine decarboxylase proenzyme~TIGRFAM: S-adenosylmethionine decarboxylase proenzyme~PFAM: S-adenosylmethionine decarboxylase, bacterial/archaeal inference protein motif:TFAM:TIGR03330 db_xref GO:0004014 db_xref InterPro:IPR003826 db_xref InterPro:IPR017716 861767 862615 gene locus_tag Alide2_0818 861767 862615 CDS product Sulfate-transporting ATPase EC_number 3.6.3.25 transl_table 11 protein_id gb|AEB83233.1||gnl|jgi|Alide2_0818 note PFAM: ABC transporter-like~KEGG: dia:Dtpsy_0716 ABC transporter related~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.25 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 862612 863394 gene locus_tag Alide2_0819 862612 863394 CDS product protein of unknown function DUF140 transl_table 11 protein_id gb|AEB83234.1||gnl|jgi|Alide2_0819 note KEGG: dia:Dtpsy_0717 protein of unknown function DUF140~TIGRFAM: Domain of unknown function DUF140~PFAM: Domain of unknown function DUF140 inference protein motif:TFAM:TIGR00056 db_xref InterPro:IPR003453 863429 863917 gene locus_tag Alide2_0820 863429 863917 CDS product Mammalian cell entry related domain protein transl_table 11 protein_id gb|AEB83235.1||gnl|jgi|Alide2_0820 note PFAM: Mammalian cell entry-related~KEGG: dia:Dtpsy_0718 mammalian cell entry related domain protein inference protein motif:PFAM:PF02470 db_xref InterPro:IPR003399 863914 864654 gene locus_tag Alide2_0821 863914 864654 CDS product VacJ family lipoprotein transl_table 11 protein_id gb|AEB83236.1||gnl|jgi|Alide2_0821 note PFAM: VacJ-like lipoprotein~KEGG: ajs:Ajs_0751 VacJ family lipoprotein inference protein motif:PFAM:PF04333 db_xref InterPro:IPR007428 864772 865434 gene locus_tag Alide2_0822 864772 865434 CDS product toluene tolerance family protein transl_table 11 protein_id gb|AEB83237.1||gnl|jgi|Alide2_0822 note PFAM: Toluene tolerance Ttg2~KEGG: dia:Dtpsy_0720 toluene tolerance family protein inference protein motif:PFAM:PF05494 db_xref InterPro:IPR006311 db_xref InterPro:IPR008869 865452 865724 gene locus_tag Alide2_0823 865452 865724 CDS product sulfate transporter/antisigma-factor antagonist STAS transl_table 11 protein_id gb|AEB83238.1||gnl|jgi|Alide2_0823 note KEGG: dia:Dtpsy_0721 sulfate transporter/antisigma-factor antagonist STAS inference similar to AA sequence:KEGG:Dtpsy_0721 865788 867083 gene locus_tag Alide2_0824 865788 867083 CDS product diguanylate cyclase with PAS/PAC sensor transl_table 11 protein_id gb|AEB83239.1||gnl|jgi|Alide2_0824 note TIGRFAM: Diguanylate cyclase, predicted; PAS~PFAM: Diguanylate cyclase, predicted; PAS fold-4~KEGG: gpb:HDN1F_11000 hypothetical protein~SMART: Diguanylate cyclase, predicted; PAS; PAC motif inference protein motif:TFAM:TIGR00254 db_xref GO:0004871 db_xref InterPro:IPR000014 db_xref InterPro:IPR000160 db_xref InterPro:IPR001610 db_xref InterPro:IPR013656 867165 868085 gene locus_tag Alide2_0825 867165 868085 CDS product Polyamine-transporting ATPase EC_number 3.6.3.31 transl_table 11 protein_id gb|AEB83240.1||gnl|jgi|Alide2_0825 note PFAM: ABC transporter-like~KEGG: dia:Dtpsy_0722 ABC transporter related~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.31 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 868082 868837 gene locus_tag Alide2_0826 868082 868837 CDS product ABC-2 type transporter transl_table 11 protein_id gb|AEB83241.1||gnl|jgi|Alide2_0826 note PFAM: ABC-2 type transporter~KEGG: aav:Aave_1020 ABC-2 type transporter inference protein motif:PFAM:PF01061 db_xref InterPro:IPR013525 868851 869099 gene locus_tag Alide2_0827 868851 869099 CDS product BolA family protein transl_table 11 protein_id gb|AEB83242.1||gnl|jgi|Alide2_0827 note PFAM: BolA protein~KEGG: dia:Dtpsy_0724 BolA family protein inference protein motif:PFAM:PF01722 db_xref InterPro:IPR002634 869124 870398 gene locus_tag Alide2_0828 869124 870398 CDS product UDP-N-acetylglucosamine 1-carboxyvinyltransferase EC_number 2.5.1.7 transl_table 11 protein_id gb|AEB83243.1||gnl|jgi|Alide2_0828 note PFAM: Enolpyruvate transferase domain~TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase~HAMAP: UDP-N-acetylglucosamine 1-carboxyvinyltransferase~KEGG: ctt:CtCNB1_0710 UDP-N-acetylglucosamine inference protein motif:HAMAP:MF_00111 db_xref InterPro:IPR001986 db_xref InterPro:IPR005750 870395 871045 gene locus_tag Alide2_0829 870395 871045 CDS product ATP phosphoribosyltransferase EC_number 2.4.2.17 transl_table 11 protein_id gb|AEB83244.1||gnl|jgi|Alide2_0829 note TIGRFAM: ATP phosphoribosyltransferase, catalytic domain~KEGG: dia:Dtpsy_0726 ATP phosphoribosyltransferase catalytic subunit~PFAM: ATP phosphoribosyltransferase, catalytic domain inference protein motif:TFAM:TIGR00070 db_xref GO:0003879 db_xref InterPro:IPR013820 871050 872366 gene locus_tag Alide2_0830 871050 872366 CDS product histidinol dehydrogenase EC_number 1.1.1.23 transl_table 11 protein_id gb|AEB83245.1||gnl|jgi|Alide2_0830 note TIGRFAM: Histidinol dehydrogenase, prokaryotic-type~KEGG: aav:Aave_1024 histidinol dehydrogenase~PFAM: Histidinol dehydrogenase, prokaryotic-type inference protein motif:TFAM:TIGR00069 db_xref GO:0004399 db_xref GO:0008270 db_xref GO:0051287 db_xref InterPro:IPR012131 872486 873213 gene locus_tag Alide2_0831 pseudo note hypothetical protein 873231 874349 gene locus_tag Alide2_0833 873231 874349 CDS product Histidinol-phosphate aminotransferase EC_number 2.6.1.9 transl_table 11 protein_id gb|AEB83246.1||gnl|jgi|Alide2_0833 note PFAM: Aminotransferase, class I/classII~TIGRFAM: Histidinol-phosphate aminotransferase~HAMAP: Histidinol-phosphate aminotransferase~KEGG: dia:Dtpsy_0729 histidinol-phosphate aminotransferase inference protein motif:HAMAP:MF_01023 db_xref InterPro:IPR004839 db_xref InterPro:IPR005861 874346 874978 gene locus_tag Alide2_0834 874346 874978 CDS product Imidazoleglycerol-phosphate dehydratase EC_number 4.2.1.19 transl_table 11 protein_id gb|AEB83247.1||gnl|jgi|Alide2_0834 note KEGG: dia:Dtpsy_0730 imidazoleglycerol-phosphate dehydratase~PFAM: Imidazoleglycerol-phosphate dehydratase inference protein motif:PRIAM:4.2.1.19 db_xref InterPro:IPR000807 875029 875697 gene locus_tag Alide2_0835 875029 875697 CDS product imidazole glycerol phosphate synthase, glutamine amidotransferase subunit transl_table 11 protein_id gb|AEB83248.1||gnl|jgi|Alide2_0835 note KEGG: dia:Dtpsy_0731 imidazole glycerol phosphate synthase subunit HisH~TIGRFAM: Imidazole glycerol phosphate synthase, subunit H~PFAM: Glutamine amidotransferase class-I, C-terminal inference protein motif:TFAM:TIGR01855 db_xref GO:0003824 db_xref InterPro:IPR000991 db_xref InterPro:IPR010139 875750 876493 gene locus_tag Alide2_0836 875750 876493 CDS product phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase EC_number 5.3.1.16 transl_table 11 protein_id gb|AEB83249.1||gnl|jgi|Alide2_0836 note TIGRFAM: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA~KEGG: ajs:Ajs_0765 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase~PFAM: Histidine biosynthesis inference protein motif:TFAM:TIGR00007 db_xref GO:0003949 db_xref InterPro:IPR006062 db_xref InterPro:IPR006063 877696 876500 gene locus_tag Alide2_0837 877696 876500 CDS product Spherulation-specific family 4 transl_table 11 protein_id gb|AEB83250.1||gnl|jgi|Alide2_0837 note PFAM: Spherulation-specific family 4~KEGG: ajs:Ajs_0766 hypothetical protein inference protein motif:PFAM:PF12138 db_xref InterPro:IPR021986 879137 877764 gene locus_tag Alide2_0838 879137 877764 CDS product putative transmembrane protein transl_table 11 protein_id gb|AEB83251.1||gnl|jgi|Alide2_0838 note KEGG: ajs:Ajs_0767 putative transmembrane protein inference similar to AA sequence:KEGG:Ajs_0767 880669 879137 gene locus_tag Alide2_0839 880669 879137 CDS product glycosyl transferase group 1 transl_table 11 protein_id gb|AEB83252.1||gnl|jgi|Alide2_0839 note PFAM: Glycosyl transferase, group 1~KEGG: ajs:Ajs_0768 glycosyl transferase, group 1 inference protein motif:PFAM:PF00534 db_xref InterPro:IPR001296 881667 880666 gene locus_tag Alide2_0840 881667 880666 CDS product putative transmembrane protein transl_table 11 protein_id gb|AEB83253.1||gnl|jgi|Alide2_0840 note KEGG: ajs:Ajs_0769 putative transmembrane protein inference similar to AA sequence:KEGG:Ajs_0769 883054 881660 gene locus_tag Alide2_0841 883054 881660 CDS product putative transmembrane protein transl_table 11 protein_id gb|AEB83254.1||gnl|jgi|Alide2_0841 note KEGG: ajs:Ajs_0770 putative transmembrane protein inference similar to AA sequence:KEGG:Ajs_0770 883616 883062 gene locus_tag Alide2_0842 883616 883062 CDS product putative lipoprotein transl_table 11 protein_id gb|AEB83255.1||gnl|jgi|Alide2_0842 note KEGG: ajs:Ajs_0771 putative lipoprotein inference similar to AA sequence:KEGG:Ajs_0771 887441 883638 gene locus_tag Alide2_0843 887441 883638 CDS product Tetratricopeptide TPR_2 repeat-containing protein transl_table 11 protein_id gb|AEB83256.1||gnl|jgi|Alide2_0843 note PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-4~KEGG: ajs:Ajs_0772 TPR repeat-containing protein inference protein motif:PFAM:PF07719 db_xref InterPro:IPR011717 db_xref InterPro:IPR013105 890319 887488 gene locus_tag Alide2_0844 890319 887488 CDS product TM1410 hypothetical-related protein transl_table 11 protein_id gb|AEB83257.1||gnl|jgi|Alide2_0844 note PFAM: TM1410 hypothetical-related protein~KEGG: ajs:Ajs_0773 polysaccharide deacetylase inference protein motif:PFAM:PF03537 db_xref InterPro:IPR004352 890492 891508 gene locus_tag Alide2_0845 890492 891508 CDS product UDP-glucose 4-epimerase EC_number 5.1.3.2 transl_table 11 protein_id gb|AEB83258.1||gnl|jgi|Alide2_0845 note TIGRFAM: UDP-glucose 4-epimerase~KEGG: ajs:Ajs_0774 UDP-galactose 4-epimerase~PFAM: NAD-dependent epimerase/dehydratase inference protein motif:TFAM:TIGR01179 db_xref GO:0003978 db_xref InterPro:IPR001509 db_xref InterPro:IPR005886 891549 892328 gene locus_tag Alide2_0846 891549 892328 CDS product imidazoleglycerol phosphate synthase, cyclase subunit EC_number 5.3.1.16 transl_table 11 protein_id gb|AEB83259.1||gnl|jgi|Alide2_0846 note TIGRFAM: Histidine biosynthesis, HisF~KEGG: dia:Dtpsy_0738 imidazole glycerol phosphate synthase subunit HisF~PFAM: Histidine biosynthesis inference protein motif:TFAM:TIGR00735 db_xref GO:0000107 db_xref InterPro:IPR004651 db_xref InterPro:IPR006062 892435 892824 gene locus_tag Alide2_0847 892435 892824 CDS product Phosphoribosyl-AMP cyclohydrolase EC_number 3.5.4.19 transl_table 11 protein_id gb|AEB83260.1||gnl|jgi|Alide2_0847 note KEGG: aav:Aave_1048 phosphoribosyl-AMP cyclohydrolase~PFAM: Phosphoribosyl-AMP cyclohydrolase inference protein motif:PRIAM:3.5.4.19 db_xref InterPro:IPR002496 892829 893206 gene locus_tag Alide2_0848 892829 893206 CDS product phosphoribosyl-ATP diphosphatase transl_table 11 protein_id gb|AEB83261.1||gnl|jgi|Alide2_0848 note KEGG: dia:Dtpsy_0740 phosphoribosyl-ATP pyrophosphatase~TIGRFAM: Phosphoribosyl-ATP pyrophosphohydrolase~PFAM: Phosphoribosyl-ATP pyrophosphohydrolase-like inference protein motif:TFAM:TIGR03188 db_xref GO:0004636 db_xref InterPro:IPR008179 db_xref InterPro:IPR021130 893203 893589 gene locus_tag Alide2_0849 893203 893589 CDS product putative transmembrane protein transl_table 11 protein_id gb|AEB83262.1||gnl|jgi|Alide2_0849 note KEGG: dia:Dtpsy_0741 putative transmembrane protein inference similar to AA sequence:KEGG:Dtpsy_0741 893582 894610 gene locus_tag Alide2_0850 893582 894610 CDS product Patatin transl_table 11 protein_id gb|AEB83263.1||gnl|jgi|Alide2_0850 note PFAM: Patatin/Phospholipase A2-related~KEGG: ajs:Ajs_0779 patatin inference protein motif:PFAM:PF01734 db_xref InterPro:IPR002641 894649 895005 gene locus_tag Alide2_0851 894649 895005 CDS product histidine triad (HIT) protein transl_table 11 protein_id gb|AEB83264.1||gnl|jgi|Alide2_0851 note KEGG: dia:Dtpsy_0743 histidine triad (HIT) protein inference similar to AA sequence:KEGG:Dtpsy_0743 895106 895354 gene locus_tag Alide2_0852 895106 895354 CDS product twin-arginine translocation protein, TatA/E family subunit transl_table 11 protein_id gb|AEB83265.1||gnl|jgi|Alide2_0852 note KEGG: ajs:Ajs_0781 twin arginine translocase protein A~TIGRFAM: Twin-arginine translocation protein TatA/E~PFAM: Bacterial sec-independent translocation protein MttA/Hcf106 inference protein motif:TFAM:TIGR01411 db_xref GO:0008565 db_xref InterPro:IPR003369 db_xref InterPro:IPR006312 895380 895859 gene locus_tag Alide2_0853 895380 895859 CDS product twin-arginine translocation protein, TatB subunit transl_table 11 protein_id gb|AEB83266.1||gnl|jgi|Alide2_0853 note KEGG: dia:Dtpsy_0745 sec-independent translocase~TIGRFAM: Twin-arginine translocation protein TatB~PFAM: Bacterial sec-independent translocation protein MttA/Hcf106 inference protein motif:TFAM:TIGR01410 db_xref InterPro:IPR003369 db_xref InterPro:IPR018448 895925 896713 gene locus_tag Alide2_0854 895925 896713 CDS product Sec-independent protein translocase, TatC subunit transl_table 11 protein_id gb|AEB83267.1||gnl|jgi|Alide2_0854 note KEGG: dia:Dtpsy_0746 sec-independent protein translocase, TatC subunit~TIGRFAM: Twin arginine-targeting protein translocase, TatC~PFAM: Sec-independent periplasmic protein translocase inference protein motif:TFAM:TIGR00945 db_xref InterPro:IPR002033 db_xref InterPro:IPR019822 897926 896787 gene locus_tag Alide2_0855 897926 896787 CDS product HtrA2 peptidase EC_number 3.4.21.108 transl_table 11 protein_id gb|AEB83268.1||gnl|jgi|Alide2_0855 note PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF~KEGG: ajs:Ajs_0784 peptidase S1 and S6, chymotrypsin/Hap~SMART: PDZ/DHR/GLGF inference protein motif:PRIAM:3.4.21.108 db_xref InterPro:IPR001254 db_xref InterPro:IPR001478 898017 898769 gene locus_tag Alide2_0856 898017 898769 CDS product NGG1p interacting factor 3 protein, NIF3 transl_table 11 protein_id gb|AEB83269.1||gnl|jgi|Alide2_0856 note KEGG: dia:Dtpsy_0749 protein of unknown function DUF34~TIGRFAM: NGG1p interacting factor 3, NIF3~PFAM: NGG1p interacting factor 3, NIF3 inference protein motif:TFAM:TIGR00486 db_xref InterPro:IPR002678 898832 899884 gene locus_tag Alide2_0857 898832 899884 CDS product 4-hydroxythreonine-4-phosphate dehydrogenase EC_number 1.1.1.262 transl_table 11 protein_id gb|AEB83270.1||gnl|jgi|Alide2_0857 note TIGRFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA~KEGG: ajs:Ajs_0787 4-hydroxythreonine-4-phosphate dehydrogenase~PFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA inference protein motif:TFAM:TIGR00557 db_xref GO:0050570 db_xref GO:0051287 db_xref InterPro:IPR005255 900379 899951 gene locus_tag Alide2_0858 900379 899951 CDS product large conductance mechanosensitive channel protein transl_table 11 protein_id gb|AEB83271.1||gnl|jgi|Alide2_0858 note KEGG: dac:Daci_5504 large-conductance mechanosensitive channel~TIGRFAM: Large-conductance mechanosensitive channel~PFAM: Large-conductance mechanosensitive channel inference protein motif:TFAM:TIGR00220 db_xref GO:0005216 db_xref InterPro:IPR001185 900505 901104 gene locus_tag Alide2_0859 900505 901104 CDS product ubiquinol-cytochrome c reductase, iron-sulfur subunit EC_number 1.10.2.2 transl_table 11 protein_id gb|AEB83272.1||gnl|jgi|Alide2_0859 note TIGRFAM: Ubiquinol-cytochrome c reductase, iron-sulphur subunit~KEGG: ajs:Ajs_0789 ubiquinol-cytochrome c reductase, iron-sulfur subunit~PFAM: Rieske [2Fe-2S] iron-sulphur domain; Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal inference protein motif:TFAM:TIGR01416 db_xref GO:0008121 db_xref InterPro:IPR006317 db_xref InterPro:IPR017941 db_xref InterPro:IPR019470 901120 902541 gene locus_tag Alide2_0860 901120 902541 CDS product Cytochrome b/b6 domain protein transl_table 11 protein_id gb|AEB83273.1||gnl|jgi|Alide2_0860 note PFAM: Cytochrome b/b6, C-terminal; Cytochrome b/b6, N-terminal~KEGG: dia:Dtpsy_0753 cytochrome b/b6 domain protein inference protein motif:PFAM:PF00032 db_xref GO:0009055 db_xref GO:0016491 db_xref InterPro:IPR005797 db_xref InterPro:IPR005798 902558 903313 gene locus_tag Alide2_0861 902558 903313 CDS product cytochrome c1 transl_table 11 protein_id gb|AEB83274.1||gnl|jgi|Alide2_0861 note KEGG: ajs:Ajs_0791 cytochrome c1~manually curated~PFAM: Cytochrome c1 inference protein motif:PFAM:PF02167 db_xref GO:0005506 db_xref GO:0009055 db_xref GO:0020037 db_xref InterPro:IPR002326 903412 904023 gene locus_tag Alide2_0862 903412 904023 CDS product Glutathione S-transferase domain protein transl_table 11 protein_id gb|AEB83275.1||gnl|jgi|Alide2_0862 note PFAM: Glutathione S-transferase, N-terminal; Glutathione S-transferase, C-terminal~KEGG: dia:Dtpsy_0755 glutathione S-transferase domain protein inference protein motif:PFAM:PF02798 db_xref InterPro:IPR004045 db_xref InterPro:IPR004046 904056 904580 gene locus_tag Alide2_0863 904056 904580 CDS product Stringent starvation protein B transl_table 11 protein_id gb|AEB83276.1||gnl|jgi|Alide2_0863 note PFAM: Stringent starvation protein B~KEGG: dia:Dtpsy_0756 stringent starvation protein B inference protein motif:PFAM:PF04386 db_xref InterPro:IPR007481 904642 904717 gene locus_tag Alide2_R0007 note tRNA-Thr2 904642 904717 tRNA product tRNA-Thr 905062 904763 gene locus_tag Alide2_0864 905062 904763 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83277.1||gnl|jgi|Alide2_0864 note KEGG: dia:Dtpsy_0757 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_0757 905304 908063 gene locus_tag Alide2_0865 905304 908063 CDS product Protein translocase subunit secA transl_table 11 protein_id gb|AEB83278.1||gnl|jgi|Alide2_0865 note SMART: SecA DEAD-like, N-terminal; SecA preprotein, cross-linking domain~TIGRFAM: SecA protein~KEGG: dia:Dtpsy_0759 preprotein translocase subunit SecA~HAMAP: SecA protein~PFAM: SecA DEAD-like, N-terminal; SecA preprotein, cross-linking domain; SecA Wing/Scaffold; SEC-C motif inference protein motif:HAMAP:MF_01382 db_xref InterPro:IPR000185 db_xref InterPro:IPR004027 db_xref InterPro:IPR011115 db_xref InterPro:IPR011116 db_xref InterPro:IPR011130 908139 909368 gene locus_tag Alide2_0866 908139 909368 CDS product Arginine biosynthesis bifunctional protein ArgJ EC_number 2.3.1.1 transl_table 11 protein_id gb|AEB83279.1||gnl|jgi|Alide2_0866 note PFAM: Arginine biosynthesis protein ArgJ~TIGRFAM: Arginine biosynthesis protein ArgJ~HAMAP: Arginine biosynthesis protein ArgJ~KEGG: ajs:Ajs_0797 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein inference protein motif:HAMAP:MF_01106 db_xref InterPro:IPR002813 909423 910295 gene locus_tag Alide2_0867 909423 910295 CDS product protein of unknown function DUF815 transl_table 11 protein_id gb|AEB83280.1||gnl|jgi|Alide2_0867 note KEGG: dia:Dtpsy_0761 protein of unknown function DUF815~PFAM: Domain of unknown function DUF815~SMART: ATPase, AAA+ type, core inference protein motif:PFAM:PF05673 db_xref InterPro:IPR003593 db_xref InterPro:IPR008533 910292 910717 gene locus_tag Alide2_0868 910292 910717 CDS product NUDIX hydrolase transl_table 11 protein_id gb|AEB83281.1||gnl|jgi|Alide2_0868 note PFAM: NUDIX hydrolase domain~KEGG: dia:Dtpsy_0762 NUDIX hydrolase inference protein motif:PFAM:PF00293 db_xref GO:0016787 db_xref InterPro:IPR000086 910986 910780 gene locus_tag Alide2_0869 910986 910780 CDS product Uncharacterized zinc-binding family protein transl_table 11 protein_id gb|AEB83282.1||gnl|jgi|Alide2_0869 note PFAM: Uncharacterised protein family, zinc-binding~KEGG: dia:Dtpsy_0763 protein of unknown function DUF329 inference protein motif:PFAM:PF03884 db_xref GO:0008270 db_xref InterPro:IPR005584 911743 910988 gene locus_tag Alide2_0870 911743 910988 CDS product protein of unknown function DUF1342 transl_table 11 protein_id gb|AEB83283.1||gnl|jgi|Alide2_0870 note PFAM: Uncharacterised protein family UPF0289~KEGG: dia:Dtpsy_0764 hypothetical protein inference protein motif:PFAM:PF07072 db_xref InterPro:IPR009777 912440 911826 gene locus_tag Alide2_0871 912440 911826 CDS product dephospho-CoA kinase EC_number 2.7.1.24 transl_table 11 protein_id gb|AEB83284.1||gnl|jgi|Alide2_0871 note TIGRFAM: Dephospho-CoA kinase~KEGG: ajs:Ajs_0802 dephospho-CoA kinase~PFAM: Dephospho-CoA kinase inference protein motif:TFAM:TIGR00152 db_xref GO:0004140 db_xref GO:0005524 db_xref InterPro:IPR001977 913339 912461 gene locus_tag Alide2_0872 913339 912461 CDS product Prepilin peptidase EC_number 3.4.23.43 transl_table 11 protein_id gb|AEB83285.1||gnl|jgi|Alide2_0872 note KEGG: dia:Dtpsy_0766 prepilin peptidase~PFAM: Peptidase A24A, N-terminal; Peptidase A24A, prepilin type IV inference protein motif:PRIAM:3.4.23.43 db_xref InterPro:IPR000045 db_xref InterPro:IPR010627 914556 913339 gene locus_tag Alide2_0873 914556 913339 CDS product Type II secretion system F domain protein transl_table 11 protein_id gb|AEB83286.1||gnl|jgi|Alide2_0873 note PFAM: Type II secretion system F domain~KEGG: ajs:Ajs_0804 type II secretion system protein inference protein motif:PFAM:PF00482 db_xref InterPro:IPR018076 916317 914578 gene locus_tag Alide2_0874 916317 914578 CDS product type IV-A pilus assembly ATPase PilB transl_table 11 protein_id gb|AEB83287.1||gnl|jgi|Alide2_0874 note TIGRFAM: ATPase, type IV, pilus assembly, PilB~PFAM: Type II secretion system protein E; General secretory system II, protein E, N-terminal~KEGG: ajs:Ajs_0805 type IV-A pilus assembly ATPase PilB~SMART: ATPase, AAA+ type, core inference protein motif:TFAM:TIGR02538 db_xref GO:0005524 db_xref GO:0008565 db_xref InterPro:IPR001482 db_xref InterPro:IPR003593 db_xref InterPro:IPR007831 db_xref InterPro:IPR013374 916693 917784 gene locus_tag Alide2_0875 916693 917784 CDS product integrase family protein transl_table 11 protein_id gb|AEB83288.1||gnl|jgi|Alide2_0875 note KEGG: ajs:Ajs_0807 phage integrase family protein~manually curated~PFAM: Integrase, catalytic core, phage inference protein motif:PFAM:PF00589 db_xref GO:0003677 db_xref InterPro:IPR002104 918106 918597 gene locus_tag Alide2_0876 918106 918597 CDS product helix-turn-helix domain protein transl_table 11 protein_id gb|AEB83289.1||gnl|jgi|Alide2_0876 note KEGG: vap:Vapar_5848 transcriptional regulator, XRE family~PFAM: Helix-turn-helix type 3~SMART: Helix-turn-helix type 3 inference protein motif:PFAM:PF01381 db_xref GO:0043565 db_xref InterPro:IPR001387 918594 919250 gene locus_tag Alide2_0877 918594 919250 CDS product Domain of unknown function DUF1814 transl_table 11 protein_id gb|AEB83290.1||gnl|jgi|Alide2_0877 note PFAM: Protein of unknown function DUF1814~KEGG: vap:Vapar_5847 hypothetical protein inference protein motif:PFAM:PF08843 db_xref InterPro:IPR014942 919394 920080 gene locus_tag Alide2_0878 919394 920080 CDS product helix-turn-helix domain protein transl_table 11 protein_id gb|AEB83291.1||gnl|jgi|Alide2_0878 note KEGG: tbd:Tbd_1344 XRE family transcriptional regulator~PFAM: Helix-turn-helix type 3~SMART: Helix-turn-helix type 3 inference protein motif:PFAM:PF01381 db_xref GO:0043565 db_xref InterPro:IPR001387 920077 920622 gene locus_tag Alide2_0879 920077 920622 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83292.1||gnl|jgi|Alide2_0879 note KEGG: pol:Bpro_0676 hypothetical protein inference similar to AA sequence:KEGG:Bpro_0676 921351 920995 gene locus_tag Alide2_0880 pseudo 922209 921406 gene locus_tag Alide2_0881 922209 921406 CDS product IstB domain protein ATP-binding protein transl_table 11 protein_id gb|AEB83293.1||gnl|jgi|Alide2_0881 note KEGG: axy:AXYL_06594 IstB-like ATP binding family protein 3~PFAM: IstB-like ATP-binding protein~SMART: ATPase, AAA+ type, core inference protein motif:PFAM:PF01695 db_xref GO:0005524 db_xref InterPro:IPR002611 db_xref InterPro:IPR003593 923725 922199 gene locus_tag Alide2_0882 923725 922199 CDS product Integrase catalytic region transl_table 11 protein_id gb|AEB83294.1||gnl|jgi|Alide2_0882 note PFAM: Integrase, catalytic core~KEGG: axy:AXYL_06593 integrase family protein 10 inference protein motif:PFAM:PF00665 db_xref GO:0003677 db_xref InterPro:IPR001584 924774 923884 gene locus_tag Alide2_0883 924774 923884 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83295.1||gnl|jgi|Alide2_0883 note KEGG: dac:Daci_4208 hypothetical protein inference similar to AA sequence:KEGG:Daci_4208 926075 924906 gene locus_tag Alide2_0884 926075 924906 CDS product phage integrase family protein transl_table 11 protein_id gb|AEB83296.1||gnl|jgi|Alide2_0884 note KEGG: ajs:Ajs_3614 phage integrase family protein inference similar to AA sequence:KEGG:Ajs_3614 926537 926187 gene locus_tag Alide2_0885 pseudo 927519 926605 gene locus_tag Alide2_0886 927519 926605 CDS product Integrase catalytic region transl_table 11 protein_id gb|AEB83297.1||gnl|jgi|Alide2_0886 note PFAM: Integrase, catalytic core~KEGG: rpf:Rpic12D_2820 integrase catalytic region inference protein motif:PFAM:PF00665 db_xref GO:0003677 db_xref InterPro:IPR001584 927839 927516 gene locus_tag Alide2_0887 927839 927516 CDS product transposase IS3/IS911 family protein transl_table 11 protein_id gb|AEB83298.1||gnl|jgi|Alide2_0887 note PFAM: Transposase IS3/IS911family~KEGG: ajs:Ajs_0906 transposase IS3/IS911 family protein inference protein motif:PFAM:PF01527 db_xref GO:0003677 db_xref GO:0004803 db_xref InterPro:IPR002514 928113 928037 gene locus_tag Alide2_R0008 note tRNA-Pro3 928113 928037 tRNA product tRNA-Pro 929188 928139 gene locus_tag Alide2_0888 929188 928139 CDS product Trans-hexaprenyltranstransferase EC_number 2.5.1.30 transl_table 11 protein_id gb|AEB83299.1||gnl|jgi|Alide2_0888 note KEGG: ajs:Ajs_0840 dimethylallyltranstransferase~PFAM: Polyprenyl synthetase inference protein motif:PRIAM:2.5.1.30 db_xref InterPro:IPR000092 929295 929606 gene locus_tag Alide2_0889 929295 929606 CDS product 50S ribosomal protein L21 transl_table 11 protein_id gb|AEB83300.1||gnl|jgi|Alide2_0889 note TIGRFAM: Ribosomal protein L21~HAMAP: Ribosomal protein L21~KEGG: ajs:Ajs_0841 50S ribosomal protein L21~PFAM: Ribosomal protein L21 inference protein motif:HAMAP:MF_01363 db_xref InterPro:IPR001787 929622 929879 gene locus_tag Alide2_0890 929622 929879 CDS product 50S ribosomal protein L27 transl_table 11 protein_id gb|AEB83301.1||gnl|jgi|Alide2_0890 note TIGRFAM: Ribosomal protein L27~HAMAP: Ribosomal protein L27~KEGG: dia:Dtpsy_0771 50S ribosomal protein L27~PFAM: Ribosomal protein L27 inference protein motif:HAMAP:MF_00539 db_xref InterPro:IPR001684 930005 931078 gene locus_tag Alide2_0891 930005 931078 CDS product GTPase obg transl_table 11 protein_id gb|AEB83302.1||gnl|jgi|Alide2_0891 note TIGRFAM: GTP-binding protein Obg/CgtA~HAMAP: GTP-binding protein Obg/CgtA~KEGG: ajs:Ajs_0843 GTPase ObgE~PFAM: GTP1/OBG subdomain; GTP-binding protein, HSR1-related inference protein motif:HAMAP:MF_01454 db_xref InterPro:IPR002917 db_xref InterPro:IPR006169 db_xref InterPro:IPR014100 931143 932282 gene locus_tag Alide2_0892 931143 932282 CDS product glutamate 5-kinase transl_table 11 protein_id gb|AEB83303.1||gnl|jgi|Alide2_0892 note TIGRFAM: Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase~PFAM: Aspartate/glutamate/uridylate kinase; Pseudouridine synthase/archaeosine transglycosylase~KEGG: dia:Dtpsy_0773 gamma-glutamyl kinase~SMART: Pseudouridine synthase/archaeosine transglycosylase inference protein motif:TFAM:TIGR01027 db_xref GO:0004349 db_xref InterPro:IPR001048 db_xref InterPro:IPR002478 db_xref InterPro:IPR005715 932980 932306 gene locus_tag Alide2_0893 932980 932306 CDS product NUDIX hydrolase transl_table 11 protein_id gb|AEB83304.1||gnl|jgi|Alide2_0893 note PFAM: NUDIX hydrolase domain~KEGG: dia:Dtpsy_0774 dinucleoside polyphosphate hydrolase inference protein motif:PFAM:PF00293 db_xref GO:0016787 db_xref InterPro:IPR000086 933082 934827 gene locus_tag Alide2_0894 933082 934827 CDS product Prolyl-tRNA synthetase transl_table 11 protein_id gb|AEB83305.1||gnl|jgi|Alide2_0894 note TIGRFAM: Prolyl-tRNA synthetase, class IIa, bacterial~HAMAP: Prolyl-tRNA synthetase, class IIa, bacterial~KEGG: dia:Dtpsy_0775 prolyl-tRNA synthetase~PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; YbaK/aminoacyl-tRNA synthetase-associated domain; Anticodon-binding inference protein motif:HAMAP:MF_01569 db_xref InterPro:IPR002314 db_xref InterPro:IPR004154 db_xref InterPro:IPR004500 db_xref InterPro:IPR007214 934824 935468 gene locus_tag Alide2_0895 934824 935468 CDS product Lytic transglycosylase catalytic transl_table 11 protein_id gb|AEB83306.1||gnl|jgi|Alide2_0895 note PFAM: Lytic transglycosylase-like, catalytic~KEGG: ajs:Ajs_0847 lytic transglycosylase, catalytic inference protein motif:PFAM:PF01464 db_xref InterPro:IPR008258 936778 935444 gene locus_tag Alide2_0896 936778 935444 CDS product protein of unknown function DUF21 transl_table 11 protein_id gb|AEB83307.1||gnl|jgi|Alide2_0896 note PFAM: Domain of unknown function DUF21; Cystathionine beta-synthase, core; Transporter-associated domain~KEGG: dia:Dtpsy_0777 protein of unknown function DUF21 inference protein motif:PFAM:PF01595 db_xref InterPro:IPR000644 db_xref InterPro:IPR002550 db_xref InterPro:IPR005170 937829 936822 gene locus_tag Alide2_0897 937829 936822 CDS product AAA ATPase central domain protein transl_table 11 protein_id gb|AEB83308.1||gnl|jgi|Alide2_0897 note KEGG: aav:Aave_3667 ATPase central domain-containing protein~PFAM: ATPase, AAA-type, core~SMART: ATPase, AAA+ type, core inference protein motif:PFAM:PF00004 db_xref GO:0005524 db_xref InterPro:IPR003593 db_xref InterPro:IPR003959 938302 937970 gene locus_tag Alide2_0898 938302 937970 CDS product glutaredoxin-like protein transl_table 11 protein_id gb|AEB83309.1||gnl|jgi|Alide2_0898 note KEGG: dia:Dtpsy_0778 glutaredoxin-like protein~TIGRFAM: Monothiol glutaredoxin-related~PFAM: Glutaredoxin inference protein motif:TFAM:TIGR00365 db_xref InterPro:IPR002109 db_xref InterPro:IPR004480 939204 938359 gene locus_tag Alide2_0899 939204 938359 CDS product protein-(glutamine-N5) methyltransferase, release factor-specific EC_number 2.1.1.72 transl_table 11 protein_id gb|AEB83310.1||gnl|jgi|Alide2_0899 note TIGRFAM: Protein-(glutamine-N5) methyltransferase, release factor-specific; Modification methylase HemK~KEGG: ajs:Ajs_0850 HemK family modification methylase~PFAM: Methyltransferase small inference protein motif:TFAM:TIGR03534 db_xref GO:0008276 db_xref InterPro:IPR004556 db_xref InterPro:IPR007848 db_xref InterPro:IPR019874 940363 939248 gene locus_tag Alide2_0900 940363 939248 CDS product Peptide chain release factor 1 transl_table 11 protein_id gb|AEB83311.1||gnl|jgi|Alide2_0900 note SMART: Peptide chain release factor~TIGRFAM: Peptide chain release factor 1~KEGG: ajs:Ajs_0851 peptide chain release factor 1~HAMAP: Peptide chain release factor 1~PFAM: Peptide chain release factor class I/class II; Peptide chain release factor inference protein motif:HAMAP:MF_00093 db_xref InterPro:IPR000352 db_xref InterPro:IPR004373 db_xref InterPro:IPR005139 941745 940432 gene locus_tag Alide2_0901 941745 940432 CDS product glutamyl-tRNA reductase transl_table 11 protein_id gb|AEB83312.1||gnl|jgi|Alide2_0901 note KEGG: dia:Dtpsy_0781 glutamyl-tRNA reductase~TIGRFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase~PFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain; Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase inference protein motif:TFAM:TIGR01035 db_xref GO:0008883 db_xref GO:0050661 db_xref InterPro:IPR000343 db_xref InterPro:IPR006151 db_xref InterPro:IPR015895 db_xref InterPro:IPR015896 941820 942095 gene locus_tag Alide2_0902 941820 942095 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83313.1||gnl|jgi|Alide2_0902 note KEGG: dia:Dtpsy_0782 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_0782 943105 942212 gene locus_tag Alide2_0903 943105 942212 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB83314.1||gnl|jgi|Alide2_0903 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: dia:Dtpsy_0783 transcriptional regulator, LysR family inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 943231 944214 gene locus_tag Alide2_0904 943231 944214 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83315.1||gnl|jgi|Alide2_0904 note KEGG: ajs:Ajs_0855 hypothetical protein inference similar to AA sequence:KEGG:Ajs_0855 db_xref InterPro:IPR005064 944214 945116 gene locus_tag Alide2_0905 944214 945116 CDS product N-formylglutamate amidohydrolase transl_table 11 protein_id gb|AEB83316.1||gnl|jgi|Alide2_0905 note PFAM: N-formylglutamate amidohydrolase~KEGG: ajs:Ajs_0856 N-formylglutamate amidohydrolase inference protein motif:PFAM:PF05013 db_xref InterPro:IPR007709 947592 945160 gene locus_tag Alide2_0906 947592 945160 CDS product MscS Mechanosensitive ion channel transl_table 11 protein_id gb|AEB83317.1||gnl|jgi|Alide2_0906 note PFAM: Mechanosensitive ion channel MscS; Protein of unknown function DUF3772~KEGG: ajs:Ajs_0857 MscS mechanosensitive ion channel inference protein motif:PFAM:PF00924 db_xref InterPro:IPR006685 db_xref InterPro:IPR022249 948370 947621 gene locus_tag Alide2_0907 948370 947621 CDS product Glycerophosphodiester phosphodiesterase EC_number 3.1.4.46 transl_table 11 protein_id gb|AEB83318.1||gnl|jgi|Alide2_0907 note KEGG: dia:Dtpsy_0787 glycerophosphodiester phosphodiesterase~PFAM: Glycerophosphoryl diester phosphodiesterase inference protein motif:PRIAM:3.1.4.46 db_xref InterPro:IPR004129 949384 948377 gene locus_tag Alide2_0908 949384 948377 CDS product Glycerol-3-phosphate-transporting ATPase EC_number 3.6.3.20 transl_table 11 protein_id gb|AEB83319.1||gnl|jgi|Alide2_0908 note PFAM: ABC transporter-like; Transport-associated OB, type 2~KEGG: ctt:CtCNB1_0786 sn-glycerol-3-phosphate transport ATP-binding protein~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.20 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 db_xref InterPro:IPR013611 950293 949445 gene locus_tag Alide2_0909 950293 949445 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB83320.1||gnl|jgi|Alide2_0909 note PFAM: Binding-protein-dependent transport systems inner membrane component~KEGG: dia:Dtpsy_0789 binding-protein-dependent transport systems inner membrane component inference protein motif:PFAM:PF00528 db_xref GO:0005215 db_xref InterPro:IPR000515 951182 950301 gene locus_tag Alide2_0910 951182 950301 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB83321.1||gnl|jgi|Alide2_0910 note PFAM: Binding-protein-dependent transport systems inner membrane component~KEGG: ctt:CtCNB1_0788 sn-glycerol-3-phosphate transport systempermease protein UgpA inference protein motif:PFAM:PF00528 db_xref GO:0005215 db_xref InterPro:IPR000515 952566 951253 gene locus_tag Alide2_0911 952566 951253 CDS product extracellular solute-binding protein family 1 transl_table 11 protein_id gb|AEB83322.1||gnl|jgi|Alide2_0911 note PFAM: Bacterial extracellular solute-binding, family 1~KEGG: dia:Dtpsy_0791 extracellular solute-binding protein family 1 inference protein motif:PFAM:PF01547 db_xref GO:0005215 db_xref InterPro:IPR006059 952898 954127 gene locus_tag Alide2_0912 952898 954127 CDS product Phosphoglycerate dehydrogenase EC_number 1.1.1.95 transl_table 11 protein_id gb|AEB83323.1||gnl|jgi|Alide2_0912 note KEGG: ajs:Ajs_0863 D-3-phosphoglycerate dehydrogenase~PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; Amino acid-binding ACT; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain inference protein motif:PRIAM:1.1.1.95 db_xref InterPro:IPR002912 db_xref InterPro:IPR006139 db_xref InterPro:IPR006140 954249 958166 gene locus_tag Alide2_0913 954249 958166 CDS product FAD linked oxidase domain protein transl_table 11 protein_id gb|AEB83324.1||gnl|jgi|Alide2_0913 note PFAM: FAD linked oxidase, N-terminal; FAD-linked oxidase, C-terminal; Cysteine-rich domain~KEGG: dia:Dtpsy_0793 FAD linked oxidase domain protein inference protein motif:PFAM:PF01565 db_xref GO:0003824 db_xref GO:0016491 db_xref GO:0050660 db_xref InterPro:IPR004017 db_xref InterPro:IPR004113 db_xref InterPro:IPR006094 958163 958615 gene locus_tag Alide2_0914 958163 958615 CDS product histidine triad (HIT) protein transl_table 11 protein_id gb|AEB83325.1||gnl|jgi|Alide2_0914 note PFAM: Histidine triad (HIT) protein~KEGG: ajs:Ajs_0865 histidine triad (HIT) protein inference protein motif:PFAM:PF01230 db_xref InterPro:IPR001310 958692 959111 gene locus_tag Alide2_0915 958692 959111 CDS product protein of unknown function DUF971 transl_table 11 protein_id gb|AEB83326.1||gnl|jgi|Alide2_0915 note PFAM: Gamma-butyrobetaine dioxygenase/Trimethyllysine dioxygenase, N-terminal~KEGG: dia:Dtpsy_0795 protein of unknown function DUF971 inference protein motif:PFAM:PF06155 db_xref InterPro:IPR010376 959189 959920 gene locus_tag Alide2_0916 959189 959920 CDS product ubiquinone/menaquinone biosynthesis methyltransferase transl_table 11 protein_id gb|AEB83327.1||gnl|jgi|Alide2_0916 note KEGG: dia:Dtpsy_0796 ubiquinone/menaquinone biosynthesis methyltransferase~TIGRFAM: UbiE/COQ5 methyltransferase~PFAM: UbiE/COQ5 methyltransferase inference protein motif:TFAM:TIGR01934 db_xref GO:0008168 db_xref InterPro:IPR004033 959962 960960 gene locus_tag Alide2_0917 959962 960960 CDS product import inner membrane translocase subunit Tim44 transl_table 11 protein_id gb|AEB83328.1||gnl|jgi|Alide2_0917 note KEGG: dia:Dtpsy_0797 import inner membrane translocase subunit Tim44~PFAM: Membrane transporter, Tim44-related/Ribosomal protein L45~SMART: Membrane transporter, Tim44-related/Ribosomal protein L45 inference protein motif:PFAM:PF04280 db_xref GO:0015450 db_xref InterPro:IPR007379 961035 961595 gene locus_tag Alide2_0918 961035 961595 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83329.1||gnl|jgi|Alide2_0918 note KEGG: dia:Dtpsy_0798 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_0798 961592 963157 gene locus_tag Alide2_0919 961592 963157 CDS product 2-polyprenylphenol 6-hydroxylase transl_table 11 protein_id gb|AEB83330.1||gnl|jgi|Alide2_0919 note KEGG: dia:Dtpsy_0799 putative ubiquinone biosynthesis protein UbiB~TIGRFAM: Probable ubiquinone biosynthesis protein UbiB~PFAM: ABC-1 inference protein motif:TFAM:TIGR01982 db_xref InterPro:IPR004147 db_xref InterPro:IPR010232 963209 964660 gene locus_tag Alide2_0920 963209 964660 CDS product Na+/solute symporter transl_table 11 protein_id gb|AEB83331.1||gnl|jgi|Alide2_0920 note PFAM: Sodium/solute symporter~KEGG: dia:Dtpsy_0800 Na+/solute symporter inference protein motif:PFAM:PF00474 db_xref GO:0005215 db_xref InterPro:IPR001734 964723 965004 gene locus_tag Alide2_0921 964723 965004 CDS product regulatory protein, FmdB family transl_table 11 protein_id gb|AEB83332.1||gnl|jgi|Alide2_0921 note SMART: Regulatory protein, FmdB, putative~manually curated~TIGRFAM: Regulatory protein, FmdB, putative~KEGG: dia:Dtpsy_0801 regulatory protein, FmdB family~PFAM: Regulatory protein, FmdB, putative inference protein motif:TFAM:TIGR02605 db_xref InterPro:IPR013429 965018 965641 gene locus_tag Alide2_0922 965018 965641 CDS product protein of unknown function DUF502 transl_table 11 protein_id gb|AEB83333.1||gnl|jgi|Alide2_0922 note PFAM: Protein of unknown function DUF502~KEGG: dia:Dtpsy_0802 protein of unknown function DUF502 inference protein motif:PFAM:PF04367 db_xref InterPro:IPR007462 965742 967541 gene locus_tag Alide2_0923 965742 967541 CDS product aspartyl-tRNA synthetase EC_number 6.1.1.12 transl_table 11 protein_id gb|AEB83334.1||gnl|jgi|Alide2_0923 note TIGRFAM: Aspartyl-tRNA synthetase, class IIb, bacterial/mitochondrial type~KEGG: dia:Dtpsy_0803 aspartyl-tRNA synthetase~PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; GAD domain inference protein motif:TFAM:TIGR00459 db_xref GO:0005524 db_xref GO:0016874 db_xref InterPro:IPR004115 db_xref InterPro:IPR004364 db_xref InterPro:IPR004365 db_xref InterPro:IPR004524 967603 968049 gene locus_tag Alide2_0924 967603 968049 CDS product NUDIX hydrolase transl_table 11 protein_id gb|AEB83335.1||gnl|jgi|Alide2_0924 note PFAM: NUDIX hydrolase domain~KEGG: dia:Dtpsy_0805 NUDIX hydrolase inference protein motif:PFAM:PF00293 db_xref GO:0016787 db_xref InterPro:IPR000086 968052 968813 gene locus_tag Alide2_0925 968052 968813 CDS product Endonuclease/exonuclease/phosphatase transl_table 11 protein_id gb|AEB83336.1||gnl|jgi|Alide2_0925 note PFAM: Endonuclease/exonuclease/phosphatase~KEGG: dia:Dtpsy_0806 endonuclease/exonuclease/phosphatase inference protein motif:PFAM:PF03372 db_xref InterPro:IPR005135 968956 970185 gene locus_tag Alide2_0926 968956 970185 CDS product phospholipase D/transphosphatidylase transl_table 11 protein_id gb|AEB83337.1||gnl|jgi|Alide2_0926 note KEGG: dia:Dtpsy_0807 phospholipase D/transphosphatidylase inference similar to AA sequence:KEGG:Dtpsy_0807 970290 971015 gene locus_tag Alide2_0927 970290 971015 CDS product GTP cyclohydrolase I EC_number 3.5.4.16 transl_table 11 protein_id gb|AEB83338.1||gnl|jgi|Alide2_0927 note KEGG: dia:Dtpsy_0808 GTP cyclohydrolase I~PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase inference protein motif:PRIAM:3.5.4.16 db_xref InterPro:IPR020602 971017 971439 gene locus_tag Alide2_0928 971017 971439 CDS product BLUF domain protein transl_table 11 protein_id gb|AEB83339.1||gnl|jgi|Alide2_0928 note PFAM: BLUF~KEGG: dia:Dtpsy_0809 BLUF domain protein inference protein motif:PFAM:PF04940 db_xref InterPro:IPR007024 971661 972542 gene locus_tag Alide2_0929 971661 972542 CDS product protein of unknown function DUF6 transmembrane transl_table 11 protein_id gb|AEB83340.1||gnl|jgi|Alide2_0929 note PFAM: Drug/metabolite transporter~KEGG: dia:Dtpsy_0810 protein of unknown function DUF6 transmembrane inference protein motif:PFAM:PF00892 db_xref InterPro:IPR000620 972572 974392 gene locus_tag Alide2_0930 972572 974392 CDS product histidine kinase transl_table 11 protein_id gb|AEB83341.1||gnl|jgi|Alide2_0930 note KEGG: dar:Daro_2490 sensor histidine kinase~PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain~SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain inference protein motif:PFAM:PF02518 db_xref GO:0000155 db_xref GO:0005524 db_xref InterPro:IPR003594 db_xref InterPro:IPR003661 974389 975018 gene locus_tag Alide2_0931 974389 975018 CDS product two component transcriptional regulator, LuxR family transl_table 11 protein_id gb|AEB83342.1||gnl|jgi|Alide2_0931 note KEGG: dar:Daro_2491 LuxR response regulator receiver~PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal~SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal inference protein motif:PFAM:PF00072 db_xref GO:0000156 db_xref GO:0003700 db_xref GO:0043565 db_xref InterPro:IPR000792 db_xref InterPro:IPR001789 976164 975127 gene locus_tag Alide2_0932 976164 975127 CDS product cytochrome c class I transl_table 11 protein_id gb|AEB83343.1||gnl|jgi|Alide2_0932 note PFAM: Cytochrome c, class I~KEGG: azo:azo2669 cytochrome c family protein inference protein motif:PFAM:PF00034 db_xref GO:0005506 db_xref GO:0009055 db_xref GO:0020037 db_xref InterPro:IPR003088 976300 977157 gene locus_tag Alide2_0933 976300 977157 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83344.1||gnl|jgi|Alide2_0933 note KEGG: aav:Aave_3628 hypothetical protein inference similar to AA sequence:KEGG:Aave_3628 977920 977309 gene locus_tag Alide2_0934 977920 977309 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83345.1||gnl|jgi|Alide2_0934 note KEGG: dia:Dtpsy_0813 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_0813 978020 978676 gene locus_tag Alide2_0935 978020 978676 CDS product Lysine exporter protein (LYSE/YGGA) transl_table 11 protein_id gb|AEB83346.1||gnl|jgi|Alide2_0935 note PFAM: Lysine exporter protein (LYSE/YGGA)~KEGG: ajs:Ajs_0885 lysine exporter protein LysE/YggA inference protein motif:PFAM:PF01810 db_xref InterPro:IPR001123 980143 978737 gene locus_tag Alide2_0936 980143 978737 CDS product Amidase transl_table 11 protein_id gb|AEB83347.1||gnl|jgi|Alide2_0936 note PFAM: Amidase~KEGG: dia:Dtpsy_0815 amidase inference protein motif:PFAM:PF01425 db_xref GO:0020037 db_xref InterPro:IPR000120 981630 980140 gene locus_tag Alide2_0937 981630 980140 CDS product ABC-type transporter, periplasmic subunit transl_table 11 protein_id gb|AEB83348.1||gnl|jgi|Alide2_0937 note PFAM: Bacterial extracellular solute-binding protein, family 5~KEGG: dia:Dtpsy_0816 extracellular solute-binding protein family 5 inference protein motif:PFAM:PF00496 db_xref GO:0005215 db_xref InterPro:IPR000914 db_xref InterPro:IPR006311 982602 981736 gene locus_tag Alide2_0938 982602 981736 CDS product Nickel-transporting ATPase EC_number 3.6.3.24 transl_table 11 protein_id gb|AEB83349.1||gnl|jgi|Alide2_0938 note PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal~KEGG: dia:Dtpsy_0817 ABC transporter related~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.24 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 db_xref InterPro:IPR013563 983573 982599 gene locus_tag Alide2_0939 983573 982599 CDS product oligopeptide/dipeptide ABC transporter, ATPase subunit EC_number 3.6.3.24 transl_table 11 protein_id gb|AEB83350.1||gnl|jgi|Alide2_0939 note SMART: ATPase, AAA+ type, core~TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal~KEGG: dia:Dtpsy_0818 oligopeptide/dipeptide ABC transporter, ATPase subunit~PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal inference protein motif:TFAM:TIGR01727 db_xref GO:0005524 db_xref GO:0015197 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 db_xref InterPro:IPR010066 db_xref InterPro:IPR013563 984710 983847 gene locus_tag Alide2_0940 984710 983847 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB83351.1||gnl|jgi|Alide2_0940 note PFAM: Binding-protein-dependent transport systems inner membrane component~KEGG: dia:Dtpsy_0819 binding-protein-dependent transport systems inner membrane component inference protein motif:PFAM:PF00528 db_xref GO:0005215 db_xref InterPro:IPR000515 985669 984707 gene locus_tag Alide2_0941 985669 984707 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB83352.1||gnl|jgi|Alide2_0941 note PFAM: Binding-protein-dependent transport systems inner membrane component~KEGG: dia:Dtpsy_0820 binding-protein-dependent transport systems inner membrane component inference protein motif:PFAM:PF00528 db_xref GO:0005215 db_xref InterPro:IPR000515 985814 986071 gene locus_tag Alide2_0942 985814 986071 CDS product 4Fe-4S ferredoxin iron-sulfur binding domain protein transl_table 11 protein_id gb|AEB83353.1||gnl|jgi|Alide2_0942 note KEGG: dia:Dtpsy_0821 4Fe-4S ferredoxin iron-sulfur binding domain protein inference similar to AA sequence:KEGG:Dtpsy_0821 986762 986133 gene locus_tag Alide2_0943 986762 986133 CDS product Peptidyl-tRNA hydrolase EC_number 3.1.1.29 transl_table 11 protein_id gb|AEB83354.1||gnl|jgi|Alide2_0943 note PFAM: Peptidyl-tRNA hydrolase~TIGRFAM: Peptidyl-tRNA hydrolase~HAMAP: Peptidyl-tRNA hydrolase~KEGG: dia:Dtpsy_0822 peptidyl-tRNA hydrolase inference protein motif:HAMAP:MF_00083 db_xref InterPro:IPR001328 987498 986872 gene locus_tag Alide2_0944 987498 986872 CDS product ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 transl_table 11 protein_id gb|AEB83355.1||gnl|jgi|Alide2_0944 note KEGG: dia:Dtpsy_0823 50S ribosomal protein L25/general stress protein Ctc~TIGRFAM: Ribosomal protein L25, long-form~PFAM: Ribosomal protein L25, short-form inference protein motif:TFAM:TIGR00731 db_xref GO:0003735 db_xref GO:0008097 db_xref InterPro:IPR001021 db_xref InterPro:IPR020055 988559 987600 gene locus_tag Alide2_0945 988559 987600 CDS product ribose-phosphate pyrophosphokinase EC_number 2.7.6.1 transl_table 11 protein_id gb|AEB83356.1||gnl|jgi|Alide2_0945 note TIGRFAM: Phosphoribosyl pyrophosphokinase~KEGG: dia:Dtpsy_0824 ribose-phosphate pyrophosphokinase~PFAM: Phosphoribosyltransferase inference protein motif:TFAM:TIGR01251 db_xref GO:0000287 db_xref GO:0004749 db_xref InterPro:IPR000836 db_xref InterPro:IPR005946 988751 988675 gene locus_tag Alide2_R0009 note tRNA-Gln1 988751 988675 tRNA product tRNA-Gln 989645 988779 gene locus_tag Alide2_0946 989645 988779 CDS product 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase EC_number 2.7.1.148 transl_table 11 protein_id gb|AEB83357.1||gnl|jgi|Alide2_0946 note PFAM: GHMP kinase~TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase~HAMAP: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase~KEGG: ajs:Ajs_0896 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase inference protein motif:HAMAP:MF_00061 db_xref InterPro:IPR004424 db_xref InterPro:IPR006204 990147 989650 gene locus_tag Alide2_0947 990147 989650 CDS product outer membrane lipoprotein LolB transl_table 11 protein_id gb|AEB83358.1||gnl|jgi|Alide2_0947 note PFAM: Outer membrane lipoprotein LolB~KEGG: dia:Dtpsy_0826 putative lipoprotein inference protein motif:PFAM:PF03550 db_xref InterPro:IPR004565 991925 990144 gene locus_tag Alide2_0948 991925 990144 CDS product Tetratricopeptide TPR_1 repeat-containing protein transl_table 11 protein_id gb|AEB83359.1||gnl|jgi|Alide2_0948 note PFAM: Tetratricopeptide TPR-1; Tetratricopeptide TPR-4~KEGG: ajs:Ajs_0898 TPR repeat-containing protein inference protein motif:PFAM:PF00515 db_xref InterPro:IPR001440 db_xref InterPro:IPR011717 db_xref InterPro:IPR019734 991955 992770 gene locus_tag Alide2_0949 991955 992770 CDS product formamidopyrimidine-DNA glycosylase EC_number 3.2.2.23 transl_table 11 protein_id gb|AEB83360.1||gnl|jgi|Alide2_0949 note SMART: DNA glycosylase/AP lyase, catalytic domain~TIGRFAM: DNA glycosylase/AP lyase~KEGG: ajs:Ajs_0899 formamidopyrimidine-DNA glycosylase~PFAM: DNA glycosylase/AP lyase, catalytic domain; DNA glycosylase/AP lyase, H2TH DNA-binding; Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase inference protein motif:TFAM:TIGR00577 db_xref GO:0003906 db_xref GO:0008270 db_xref GO:0008534 db_xref InterPro:IPR000191 db_xref InterPro:IPR010663 db_xref InterPro:IPR012319 db_xref InterPro:IPR015886 992840 994825 gene locus_tag Alide2_0950 992840 994825 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83361.1||gnl|jgi|Alide2_0950 note manually curated~KEGG: dia:Dtpsy_0829 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_0829 994822 995880 gene locus_tag Alide2_0951 994822 995880 CDS product A/G-specific adenine glycosylase transl_table 11 protein_id gb|AEB83362.1||gnl|jgi|Alide2_0951 note TIGRFAM: A/G-specific adenine glycosylase MutY, bacterial form~PFAM: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif~KEGG: dia:Dtpsy_0830 A/G-specific adenine glycosylase~SMART: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif inference protein motif:TFAM:TIGR01084 db_xref GO:0019104 db_xref InterPro:IPR003265 db_xref InterPro:IPR003651 db_xref InterPro:IPR005760 996857 995994 gene locus_tag Alide2_0952 996857 995994 CDS product UPF0042 nucleotide-binding protein yhbJ transl_table 11 protein_id gb|AEB83363.1||gnl|jgi|Alide2_0952 note HAMAP: ATPase, P-loop-containing~KEGG: dia:Dtpsy_0831 hypothetical protein inference protein motif:HAMAP:MF_00636 db_xref InterPro:IPR005337 998536 996863 gene locus_tag Alide2_0953 998536 996863 CDS product DNA repair protein RecN transl_table 11 protein_id gb|AEB83364.1||gnl|jgi|Alide2_0953 note KEGG: ajs:Ajs_0903 DNA repair protein RecN~TIGRFAM: DNA recombination/repair protein RecN~PFAM: RecF/RecN/SMC inference protein motif:TFAM:TIGR00634 db_xref GO:0005524 db_xref InterPro:IPR003395 db_xref InterPro:IPR004604 999435 998539 gene locus_tag Alide2_0954 999435 998539 CDS product inorganic polyphosphate/ATP-NAD kinase EC_number 2.7.1.23 transl_table 11 protein_id gb|AEB83365.1||gnl|jgi|Alide2_0954 note HAMAP: Inorganic polyphosphate/ATP-NAD kinase, predicted~KEGG: dia:Dtpsy_0833 NAD(+)/NADH kinase family protein~PFAM: Inorganic polyphosphate/ATP-NAD kinase, predicted inference protein motif:HAMAP:MF_00361 db_xref InterPro:IPR002504 999464 1000468 gene locus_tag Alide2_0955 999464 1000468 CDS product heat-inducible transcription repressor HrcA transl_table 11 protein_id gb|AEB83366.1||gnl|jgi|Alide2_0955 note TIGRFAM: Winged helix-turn-helix transcription repressor, HrcA~HAMAP: Winged helix-turn-helix transcription repressor, HrcA~KEGG: dia:Dtpsy_0847 heat-inducible transcription repressor~PFAM: Winged helix-turn-helix transcription repressor, HrcA, C-terminal inference protein motif:HAMAP:MF_00081 db_xref InterPro:IPR002571 db_xref InterPro:IPR021153 1000521 1000597 gene locus_tag Alide2_R0010 note tRNA-Met1 1000521 1000597 tRNA product tRNA-Met 1000770 1000901 gene locus_tag Alide2_0956 pseudo 1000898 1001368 gene locus_tag Alide2_0957 1000898 1001368 CDS product Restriction endonuclease, type I, EcoRI, R subunit/Type III transl_table 11 protein_id gb|AEB83367.1||gnl|jgi|Alide2_0957 note PFAM: Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal~KEGG: gur:Gura_3600 N-6 DNA methylase inference protein motif:PFAM:PF04313 db_xref GO:0003677 db_xref GO:0004519 db_xref InterPro:IPR007409 1002279 1001365 gene locus_tag Alide2_0958 1002279 1001365 CDS product Integrase catalytic region transl_table 11 protein_id gb|AEB83368.1||gnl|jgi|Alide2_0958 note PFAM: Integrase, catalytic core~KEGG: rpf:Rpic12D_2820 integrase catalytic region inference protein motif:PFAM:PF00665 db_xref GO:0003677 db_xref InterPro:IPR001584 1002599 1002276 gene locus_tag Alide2_0959 1002599 1002276 CDS product transposase IS3/IS911 family protein transl_table 11 protein_id gb|AEB83369.1||gnl|jgi|Alide2_0959 note PFAM: Transposase IS3/IS911family~KEGG: ajs:Ajs_0906 transposase IS3/IS911 family protein inference protein motif:PFAM:PF01527 db_xref GO:0003677 db_xref GO:0004803 db_xref InterPro:IPR002514 1004109 1002847 gene locus_tag Alide2_0960 1004109 1002847 CDS product outer membrane efflux protein transl_table 11 protein_id gb|AEB83370.1||gnl|jgi|Alide2_0960 note KEGG: dac:Daci_2707 outer membrane efflux protein inference similar to AA sequence:KEGG:Daci_2707 1004447 1004106 gene locus_tag Alide2_0961 1004447 1004106 CDS product Protein of unknown function DUF3240 transl_table 11 protein_id gb|AEB83371.1||gnl|jgi|Alide2_0961 note PFAM: Protein of unknown function DUF3240~KEGG: dac:Daci_2708 hypothetical protein inference protein motif:PFAM:PF11582 db_xref InterPro:IPR021634 1009008 1004444 gene locus_tag Alide2_0962 pseudo 1007999 1006794 gene locus_tag Alide2_0963 1007999 1006794 CDS product transposase IS4 family protein transl_table 11 protein_id gb|AEB83372.1||gnl|jgi|Alide2_0963 note PFAM: Transposase, IS4-like~KEGG: bvi:Bcep1808_6138 transposase, IS4 family protein inference protein motif:PFAM:PF01609 db_xref GO:0003677 db_xref GO:0004803 db_xref InterPro:IPR002559 1010242 1009019 gene locus_tag Alide2_0964 1010242 1009019 CDS product efflux transporter, RND family, MFP subunit transl_table 11 protein_id gb|AEB83373.1||gnl|jgi|Alide2_0964 note KEGG: dac:Daci_2710 RND family efflux transporter MFP subunit~TIGRFAM: Secretion protein HlyD~PFAM: Secretion protein HlyD inference protein motif:TFAM:TIGR01730 db_xref GO:0008565 db_xref InterPro:IPR006143 1010422 1010979 gene locus_tag Alide2_0965 1010422 1010979 CDS product cytochrome b561 transl_table 11 protein_id gb|AEB83374.1||gnl|jgi|Alide2_0965 note manually curated~KEGG: dac:Daci_2711 cytochrome b561 inference similar to AA sequence:KEGG:Daci_2711 db_xref InterPro:IPR011577 1011005 1011700 gene locus_tag Alide2_0966 1011005 1011700 CDS product protein of unknown function DUF125 transmembrane transl_table 11 protein_id gb|AEB83375.1||gnl|jgi|Alide2_0966 note PFAM: Domain of unknown function DUF125, transmembrane~KEGG: dac:Daci_2712 hypothetical protein inference protein motif:PFAM:PF01988 db_xref InterPro:IPR008217 1013100 1011703 gene locus_tag Alide2_0967 1013100 1011703 CDS product integral membrane sensor signal transduction histidine kinase transl_table 11 protein_id gb|AEB83376.1||gnl|jgi|Alide2_0967 note manually curated~PFAM: Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; ATPase-like, ATP-binding domain~KEGG: dac:Daci_2713 histidine kinase~SMART: Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; ATPase-like, ATP-binding domain inference protein motif:PFAM:PF00512 db_xref GO:0000155 db_xref GO:0005524 db_xref InterPro:IPR003594 db_xref InterPro:IPR003661 1013769 1013104 gene locus_tag Alide2_0968 1013769 1013104 CDS product two component transcriptional regulator, winged helix family transl_table 11 protein_id gb|AEB83377.1||gnl|jgi|Alide2_0968 note KEGG: dac:Daci_2714 two component transcriptional regulator~PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal~SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal inference protein motif:PFAM:PF00072 db_xref GO:0000156 db_xref GO:0003677 db_xref InterPro:IPR001789 db_xref InterPro:IPR001867 1013927 1014085 gene locus_tag Alide2_0969 1013927 1014085 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83378.1||gnl|jgi|Alide2_0969 inference ab initio prediction:Prodigal:1.4 1014281 1014526 gene locus_tag Alide2_0970 pseudo 1014693 1015760 gene locus_tag Alide2_0971 1014693 1015760 CDS product Alcohol dehydrogenase GroES domain protein transl_table 11 protein_id gb|AEB83379.1||gnl|jgi|Alide2_0971 note PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, C-terminal~KEGG: rpa:RPA3655 alcohol dehydrogenase inference protein motif:PFAM:PF08240 db_xref GO:0008270 db_xref GO:0016491 db_xref InterPro:IPR013149 db_xref InterPro:IPR013154 1016845 1015763 gene locus_tag Alide2_0972 1016845 1015763 CDS product Lactonase, 7-bladed beta propeller transl_table 11 protein_id gb|AEB83380.1||gnl|jgi|Alide2_0972 note PFAM: Lactonase, 7-bladed beta propeller~KEGG: dac:Daci_4552 putative hemagglutinin-related protein inference protein motif:PFAM:PF10282 db_xref InterPro:IPR019405 1017579 1016842 gene locus_tag Alide2_0973 1017579 1016842 CDS product ABC-type transporter, periplasmic subunit family 3 transl_table 11 protein_id gb|AEB83381.1||gnl|jgi|Alide2_0973 note KEGG: dac:Daci_4553 extracellular solute-binding protein~PFAM: Extracellular solute-binding protein, family 3~SMART: Extracellular solute-binding protein, family 3 inference protein motif:PFAM:PF00497 db_xref GO:0005215 db_xref InterPro:IPR001638 1018533 1017592 gene locus_tag Alide2_0974 1018533 1017592 CDS product transcriptional regulator, GntR family transl_table 11 protein_id gb|AEB83382.1||gnl|jgi|Alide2_0974 note KEGG: dac:Daci_4554 GntR family transcriptional regulator~PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR~SMART: GntR, C-terminal inference protein motif:PFAM:PF07729 db_xref GO:0003700 db_xref InterPro:IPR000524 db_xref InterPro:IPR011711 1021184 1018530 gene locus_tag Alide2_0975 1021184 1018530 CDS product Aconitate hydratase EC_number 4.2.1.3 transl_table 11 protein_id gb|AEB83383.1||gnl|jgi|Alide2_0975 note KEGG: dac:Daci_4555 aconitate hydratase~PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; Aconitase A/isopropylmalate dehydratase small subunit, swivel inference protein motif:PRIAM:4.2.1.3 db_xref InterPro:IPR000573 db_xref InterPro:IPR001030 1021270 1022241 gene locus_tag Alide2_0976 1021270 1022241 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83384.1||gnl|jgi|Alide2_0976 note KEGG: vap:Vapar_6186 hypothetical protein inference similar to AA sequence:KEGG:Vapar_6186 db_xref InterPro:IPR005064 1022296 1023285 gene locus_tag Alide2_0977 1022296 1023285 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83385.1||gnl|jgi|Alide2_0977 note KEGG: dac:Daci_4557 hypothetical protein inference similar to AA sequence:KEGG:Daci_4557 db_xref InterPro:IPR005064 1023400 1023756 gene locus_tag Alide2_0978 1023400 1023756 CDS product CutA1 divalent ion tolerance protein transl_table 11 protein_id gb|AEB83386.1||gnl|jgi|Alide2_0978 note PFAM: Divalent ion tolerance protein, CutA1~KEGG: dia:Dtpsy_2844 CutA1 divalent ion tolerance protein inference protein motif:PFAM:PF03091 db_xref InterPro:IPR004323 1024937 1023771 gene locus_tag Alide2_0979 1024937 1023771 CDS product Mandelate racemase/muconate lactonizing protein transl_table 11 protein_id gb|AEB83387.1||gnl|jgi|Alide2_0979 note KEGG: dac:Daci_3339 mandelate racemase/muconate lactonizing protein~PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; Mandelate racemase/muconate lactonizing enzyme, N-terminal~SMART: Mandelate racemase/muconate lactonizing enzyme, C-terminal inference protein motif:PFAM:PF01188 db_xref InterPro:IPR013341 db_xref InterPro:IPR013342 1025667 1024963 gene locus_tag Alide2_0980 1025667 1024963 CDS product 3-oxoacyl-(acyl-carrier-protein) reductase EC_number 1.1.1.100 transl_table 11 protein_id gb|AEB83388.1||gnl|jgi|Alide2_0980 note KEGG: vap:Vapar_5678 short-chain dehydrogenase/reductase SDR~PFAM: Short-chain dehydrogenase/reductase SDR inference protein motif:PRIAM:1.1.1.100 db_xref InterPro:IPR002198 1026622 1025657 gene locus_tag Alide2_0981 1026622 1025657 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83389.1||gnl|jgi|Alide2_0981 note KEGG: dac:Daci_3341 hypothetical protein inference similar to AA sequence:KEGG:Daci_3341 db_xref InterPro:IPR005064 1027592 1026654 gene locus_tag Alide2_0982 1027592 1026654 CDS product Dihydrodipicolinate synthase EC_number 4.2.1.52 transl_table 11 protein_id gb|AEB83390.1||gnl|jgi|Alide2_0982 note KEGG: dac:Daci_3342 dihydrodipicolinate synthetase~PFAM: Dihydrodipicolinate synthetase inference protein motif:PRIAM:4.2.1.52 db_xref InterPro:IPR002220 1027711 1028664 gene locus_tag Alide2_0983 1027711 1028664 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB83391.1||gnl|jgi|Alide2_0983 note PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding~KEGG: aav:Aave_1392 LysR family transcriptional regulator inference protein motif:PFAM:PF00126 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 1029802 1028678 gene locus_tag Alide2_0984 1029802 1028678 CDS product signal recognition particle-docking protein FtsY transl_table 11 protein_id gb|AEB83392.1||gnl|jgi|Alide2_0984 note TIGRFAM: Cell division transporter substrate-binding protein FtsY~PFAM: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle~KEGG: dia:Dtpsy_2843 signal recognition particle-docking protein FtsY~SMART: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; ATPase, AAA+ type, core inference protein motif:TFAM:TIGR00064 db_xref GO:0005525 db_xref InterPro:IPR000897 db_xref InterPro:IPR003593 db_xref InterPro:IPR004390 db_xref InterPro:IPR013822 1029832 1031262 gene locus_tag Alide2_0985 1029832 1031262 CDS product processing peptidase EC_number 3.4.24.64 transl_table 11 protein_id gb|AEB83393.1||gnl|jgi|Alide2_0985 note KEGG: dia:Dtpsy_2842 peptidase M16 domain protein~PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal inference protein motif:PRIAM:3.4.24.64 db_xref InterPro:IPR007863 db_xref InterPro:IPR011765 1031276 1032634 gene locus_tag Alide2_0986 1031276 1032634 CDS product peptidase M16 domain protein transl_table 11 protein_id gb|AEB83394.1||gnl|jgi|Alide2_0986 note KEGG: dia:Dtpsy_2841 peptidase M16 domain protein~manually curated~PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal inference protein motif:PFAM:PF05193 db_xref GO:0004222 db_xref GO:0008270 db_xref InterPro:IPR007863 db_xref InterPro:IPR011765 1032631 1033221 gene locus_tag Alide2_0987 1032631 1033221 CDS product methyltransferase EC_number 2.1.1.171 transl_table 11 protein_id gb|AEB83395.1||gnl|jgi|Alide2_0987 note TIGRFAM: RNA methyltransferase, RsmD~KEGG: dia:Dtpsy_2840 methyltransferase~PFAM: RNA methyltransferase, RsmD inference protein motif:TFAM:TIGR00095 db_xref GO:0008168 db_xref InterPro:IPR004398 1033349 1033837 gene locus_tag Alide2_0988 1033349 1033837 CDS product pantetheine-phosphate adenylyltransferase EC_number 2.7.7.3 transl_table 11 protein_id gb|AEB83396.1||gnl|jgi|Alide2_0988 note TIGRFAM: Coenzyme A biosynthesis protein; Cytidyltransferase-related~KEGG: dia:Dtpsy_2839 phosphopantetheine adenylyltransferase~PFAM: Cytidylyltransferase inference protein motif:TFAM:TIGR01510 db_xref GO:0003824 db_xref GO:0004595 db_xref InterPro:IPR001980 db_xref InterPro:IPR004820 db_xref InterPro:IPR004821 1034307 1033993 gene locus_tag Alide2_0989 1034307 1033993 CDS product transport-associated protein transl_table 11 protein_id gb|AEB83397.1||gnl|jgi|Alide2_0989 note KEGG: dia:Dtpsy_2837 transport-associated~PFAM: Transport-associated~SMART: Transport-associated and nodulation domain, bacteria inference protein motif:PFAM:PF04972 db_xref InterPro:IPR007055 db_xref InterPro:IPR014004 1034838 1034446 gene locus_tag Alide2_0990 1034838 1034446 CDS product protein of unknown function DUF883 ElaB transl_table 11 protein_id gb|AEB83398.1||gnl|jgi|Alide2_0990 note PFAM: Protein of unknown function DUF883, ElaB~KEGG: dia:Dtpsy_2835 hypothetical protein inference protein motif:PFAM:PF05957 db_xref InterPro:IPR010279 1035068 1034904 gene locus_tag Alide2_0991 1035068 1034904 CDS product protein of unknown function DUF1328 transl_table 11 protein_id gb|AEB83399.1||gnl|jgi|Alide2_0991 note PFAM: Protein of unknown function DUF1328~KEGG: dia:Dtpsy_2834 hypothetical protein inference protein motif:PFAM:PF07043 db_xref InterPro:IPR009760 1036554 1035211 gene locus_tag Alide2_0992 1036554 1035211 CDS product multi-sensor signal transduction histidine kinase transl_table 11 protein_id gb|AEB83400.1||gnl|jgi|Alide2_0992 note KEGG: ajs:Ajs_3510 multi-sensor signal transduction histidine kinase~PFAM: CHASE3; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; ATPase-like, ATP-binding domain~SMART: ATPase-like, ATP-binding domain inference protein motif:PFAM:PF05227 db_xref GO:0000155 db_xref GO:0005524 db_xref GO:0046983 db_xref InterPro:IPR003594 db_xref InterPro:IPR007891 db_xref InterPro:IPR011712 1036664 1037296 gene locus_tag Alide2_0993 1036664 1037296 CDS product two component transcriptional regulator, LuxR family transl_table 11 protein_id gb|AEB83401.1||gnl|jgi|Alide2_0993 note KEGG: dia:Dtpsy_2832 two component transcriptional regulator, LuxR family~PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal~SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal inference protein motif:PFAM:PF00072 db_xref GO:0000156 db_xref GO:0003700 db_xref GO:0043565 db_xref InterPro:IPR000792 db_xref InterPro:IPR001789 1037693 1037274 gene locus_tag Alide2_0994 1037693 1037274 CDS product response regulator receiver transl_table 11 protein_id gb|AEB83402.1||gnl|jgi|Alide2_0994 note KEGG: dia:Dtpsy_2831 response regulator receiver protein~PFAM: Signal transduction response regulator, receiver domain~SMART: Signal transduction response regulator, receiver domain inference protein motif:PFAM:PF00072 db_xref GO:0000156 db_xref InterPro:IPR001789 1038563 1037799 gene locus_tag Alide2_0995 1038563 1037799 CDS product UBA/THIF-type NAD/FAD binding protein transl_table 11 protein_id gb|AEB83403.1||gnl|jgi|Alide2_0995 note PFAM: UBA/THIF-type NAD/FAD binding fold; MoeZ/MoeB~KEGG: ajs:Ajs_3507 UBA/ThiF-type NAD/FAD binding protein inference protein motif:PFAM:PF00899 db_xref GO:0003824 db_xref InterPro:IPR000594 db_xref InterPro:IPR007901 1040067 1038631 gene locus_tag Alide2_0996 1040067 1038631 CDS product carboxyl-terminal protease transl_table 11 protein_id gb|AEB83404.1||gnl|jgi|Alide2_0996 note TIGRFAM: Peptidase S41A, C-terminal peptidase~PFAM: Peptidase S41; PDZ/DHR/GLGF~KEGG: ajs:Ajs_3506 C-terminal processing peptidase-3~SMART: Peptidase S41; PDZ/DHR/GLGF inference protein motif:TFAM:TIGR00225 db_xref GO:0008236 db_xref InterPro:IPR001478 db_xref InterPro:IPR004447 db_xref InterPro:IPR005151 1040897 1040154 gene locus_tag Alide2_0997 1040897 1040154 CDS product phosphoglycerate mutase 1 family EC_number 5.4.2.4 transl_table 11 protein_id gb|AEB83405.1||gnl|jgi|Alide2_0997 note SMART: Histidine phosphatase superfamily, clade-1~TIGRFAM: Phosphoglycerate mutase 1~KEGG: ajs:Ajs_3505 phosphoglyceromutase~PFAM: Histidine phosphatase superfamily, clade-1 inference protein motif:TFAM:TIGR01258 db_xref GO:0005515 db_xref InterPro:IPR005952 db_xref InterPro:IPR013078 1040971 1041378 gene locus_tag Alide2_0998 1040971 1041378 CDS product Rhodanese-like protein transl_table 11 protein_id gb|AEB83406.1||gnl|jgi|Alide2_0998 note KEGG: dia:Dtpsy_2827 rhodanese domain protein~PFAM: Rhodanese-like~SMART: Rhodanese-like inference protein motif:PFAM:PF00581 db_xref InterPro:IPR001763 1041427 1041690 gene locus_tag Alide2_0999 1041427 1041690 CDS product glutaredoxin 3 transl_table 11 protein_id gb|AEB83407.1||gnl|jgi|Alide2_0999 note KEGG: dia:Dtpsy_2826 glutaredoxin 3~TIGRFAM: Glutaredoxin, GrxC~PFAM: Glutaredoxin inference protein motif:TFAM:TIGR02181 db_xref InterPro:IPR002109 db_xref InterPro:IPR011900 1041793 1042248 gene locus_tag Alide2_1000 1041793 1042248 CDS product protein-export protein SecB transl_table 11 protein_id gb|AEB83408.1||gnl|jgi|Alide2_1000 note KEGG: dia:Dtpsy_2825 preprotein translocase subunit SecB~TIGRFAM: Bacterial protein export chaperone SecB~PFAM: Bacterial protein export chaperone SecB inference protein motif:TFAM:TIGR00809 db_xref GO:0051082 db_xref InterPro:IPR003708 1042315 1043307 gene locus_tag Alide2_1001 1042315 1043307 CDS product Glycerol-3-phosphate dehydrogenase (NAD(P)+) transl_table 11 protein_id gb|AEB83409.1||gnl|jgi|Alide2_1001 note manually curated~HAMAP: Glycerol-3-phosphate dehydrogenase, NAD-dependent~KEGG: xtr:100490244 glycerol-3-phosphate dehydrogenase [NAD(P)+]-like~PFAM: Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal; Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal inference protein motif:HAMAP:MF_00394 db_xref InterPro:IPR006109 db_xref InterPro:IPR006168 db_xref InterPro:IPR011128 1043425 1044159 gene locus_tag Alide2_1002 1043425 1044159 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83410.1||gnl|jgi|Alide2_1002 note KEGG: pna:Pnap_3576 hypothetical protein inference similar to AA sequence:KEGG:Pnap_3576 1045170 1044187 gene locus_tag Alide2_1003 1045170 1044187 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83411.1||gnl|jgi|Alide2_1003 note KEGG: bpa:BPP0893 hypothetical protein inference similar to AA sequence:KEGG:BPP0893 db_xref InterPro:IPR005064 1045939 1045202 gene locus_tag Alide2_1004 1045939 1045202 CDS product protein of unknown function DUF81 transl_table 11 protein_id gb|AEB83412.1||gnl|jgi|Alide2_1004 note PFAM: Protein of unknown function DUF81~KEGG: bpa:BPP0894 hypothetical protein inference protein motif:PFAM:PF01925 db_xref InterPro:IPR002781 1047480 1045954 gene locus_tag Alide2_1005 1047480 1045954 CDS product Microcystin LR degradation protein MlrC transl_table 11 protein_id gb|AEB83413.1||gnl|jgi|Alide2_1005 note PFAM: Microcystin LR degradation protein MlrC, N-terminal; Microcystin LR degradation protein MlrC, C-terminal~KEGG: bbr:BB0988 hypothetical protein inference protein motif:PFAM:PF07364 db_xref InterPro:IPR010799 db_xref InterPro:IPR015995 1048481 1047489 gene locus_tag Alide2_1006 1048481 1047489 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83414.1||gnl|jgi|Alide2_1006 note KEGG: bpa:BPP0896 hypothetical protein inference similar to AA sequence:KEGG:BPP0896 db_xref InterPro:IPR005064 1048598 1049488 gene locus_tag Alide2_1007 1048598 1049488 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB83415.1||gnl|jgi|Alide2_1007 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: bbr:BB0990 LysR family transcriptional regulator inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 1050459 1049608 gene locus_tag Alide2_1008 1050459 1049608 CDS product pantoate/beta-alanine ligase transl_table 11 protein_id gb|AEB83416.1||gnl|jgi|Alide2_1008 note KEGG: ajs:Ajs_3500 pantoate--beta-alanine ligase~TIGRFAM: Pantoate-beta-alanine ligase~PFAM: Pantoate-beta-alanine ligase inference protein motif:TFAM:TIGR00018 db_xref GO:0004592 db_xref InterPro:IPR003721 1051355 1050471 gene locus_tag Alide2_1009 1051355 1050471 CDS product 3-methyl-2-oxobutanoate hydroxymethyltransferase EC_number 2.1.2.11 transl_table 11 protein_id gb|AEB83417.1||gnl|jgi|Alide2_1009 note TIGRFAM: Ketopantoate hydroxymethyltransferase~KEGG: dia:Dtpsy_2822 3-methyl-2-oxobutanoate hydroxymethyltransferase~PFAM: Ketopantoate hydroxymethyltransferase inference protein motif:TFAM:TIGR00222 db_xref GO:0003864 db_xref InterPro:IPR003700 1051616 1051467 gene locus_tag Alide2_1010 pseudo 1051674 1052555 gene locus_tag Alide2_1011 1051674 1052555 CDS product nicotinate-nucleotide pyrophosphorylase EC_number 2.4.2.19 transl_table 11 protein_id gb|AEB83418.1||gnl|jgi|Alide2_1011 note TIGRFAM: Nicotinate-nucleotide pyrophosphorylase~KEGG: dia:Dtpsy_2821 nicotinate-nucleotide pyrophosphorylase~PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal inference protein motif:TFAM:TIGR00078 db_xref GO:0004514 db_xref InterPro:IPR002638 db_xref InterPro:IPR004393 db_xref InterPro:IPR022412 1052777 1053901 gene locus_tag Alide2_1012 1052777 1053901 CDS product quinolinate synthetase complex, A subunit EC_number 2.5.1.72 transl_table 11 protein_id gb|AEB83419.1||gnl|jgi|Alide2_1012 note TIGRFAM: Quinolinate synthetase A~KEGG: dia:Dtpsy_2820 quinolinate synthetase~PFAM: Quinolinate synthetase A inference protein motif:TFAM:TIGR00550 db_xref GO:0008987 db_xref InterPro:IPR003473 1053955 1055697 gene locus_tag Alide2_1013 1053955 1055697 CDS product para-aminobenzoate synthase, subunit I EC_number 2.6.1.85 transl_table 11 protein_id gb|AEB83420.1||gnl|jgi|Alide2_1013 note TIGRFAM: Para-aminobenzoate synthase, component I~KEGG: ajs:Ajs_3496 para-aminobenzoate synthase, subunit I~PFAM: Chorismate binding, C-terminal; Aminotransferase, class IV inference protein motif:TFAM:TIGR00553 db_xref InterPro:IPR001544 db_xref InterPro:IPR005802 db_xref InterPro:IPR015890 1056197 1055835 gene locus_tag Alide2_1014 1056197 1055835 CDS product 5-carboxymethyl-2-hydroxymuconate isomerase transl_table 11 protein_id gb|AEB83421.1||gnl|jgi|Alide2_1014 note PFAM: 5-carboxymethyl-2-hydroxymuconate isomerase~KEGG: dia:Dtpsy_2818 5-carboxymethyl-2-hydroxymuconate isomerase inference protein motif:PFAM:PF02962 db_xref InterPro:IPR004220 1057819 1056245 gene locus_tag Alide2_1015 1057819 1056245 CDS product L-aspartate oxidase EC_number 1.4.3.16 transl_table 11 protein_id gb|AEB83422.1||gnl|jgi|Alide2_1015 note TIGRFAM: L-aspartate oxidase~KEGG: vei:Veis_1080 L-aspartate oxidase~PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal inference protein motif:TFAM:TIGR00551 db_xref GO:0008734 db_xref InterPro:IPR003953 db_xref InterPro:IPR004112 db_xref InterPro:IPR005288 1058780 1057911 gene locus_tag Alide2_1016 1058780 1057911 CDS product transcriptional regulator, AraC family transl_table 11 protein_id gb|AEB83423.1||gnl|jgi|Alide2_1016 note KEGG: reh:H16_A1911 AraC family transcriptional regulator~PFAM: HTH transcriptional regulator, AraC~SMART: Helix-turn-helix, AraC type, DNA binding domain inference protein motif:PFAM:PF00165 db_xref GO:0003700 db_xref GO:0043565 db_xref InterPro:IPR000005 db_xref InterPro:IPR018060 1058876 1059430 gene locus_tag Alide2_1017 1058876 1059430 CDS product uncharacterized peroxidase-related enzyme transl_table 11 protein_id gb|AEB83424.1||gnl|jgi|Alide2_1017 note KEGG: axy:AXYL_05773 carboxymuconolactone decarboxylase family protein 5~TIGRFAM: Uncharacterised peroxidase-related; Alkylhydroperoxidase AhpD core~PFAM: Carboxymuconolactone decarboxylase inference protein motif:TFAM:TIGR01926 db_xref InterPro:IPR003779 db_xref InterPro:IPR004675 db_xref InterPro:IPR010195 1060251 1059415 gene locus_tag Alide2_1018 1060251 1059415 CDS product chromosome segregation and condensation protein ScpA transl_table 11 protein_id gb|AEB83425.1||gnl|jgi|Alide2_1018 note PFAM: Prokaryotic chromosome segregation/condensation protein ScpA~KEGG: ajs:Ajs_3492 condensin subunit ScpA inference protein motif:PFAM:PF02616 db_xref InterPro:IPR003768 1060532 1060317 gene locus_tag Alide2_1019 1060532 1060317 CDS product Protein of unknown function DUF3460 transl_table 11 protein_id gb|AEB83426.1||gnl|jgi|Alide2_1019 note PFAM: Protein of unknown function DUF3460~KEGG: ajs:Ajs_3491 hypothetical protein inference protein motif:PFAM:PF11943 db_xref InterPro:IPR021853 1060578 1061078 gene locus_tag Alide2_1020 1060578 1061078 CDS product putative lipoprotein transl_table 11 protein_id gb|AEB83427.1||gnl|jgi|Alide2_1020 note KEGG: dac:Daci_1840 putative lipoprotein inference similar to AA sequence:KEGG:Daci_1840 1062737 1061085 gene locus_tag Alide2_1021 1062737 1061085 CDS product Acetolactate synthase EC_number 2.2.1.6 transl_table 11 protein_id gb|AEB83428.1||gnl|jgi|Alide2_1021 note KEGG: ajs:Ajs_3488 hypothetical protein~PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain inference protein motif:PRIAM:2.2.1.6 db_xref InterPro:IPR011766 db_xref InterPro:IPR012001 1063957 1062806 gene locus_tag Alide2_1022 1063957 1062806 CDS product L-lactate dehydrogenase (cytochrome) EC_number 1.1.2.3 transl_table 11 protein_id gb|AEB83429.1||gnl|jgi|Alide2_1022 note KEGG: ajs:Ajs_3487 FMN-dependent alpha-hydroxy acid dehydrogenase~PFAM: FMN-dependent dehydrogenase inference protein motif:PRIAM:1.1.2.3 db_xref InterPro:IPR000262 1065564 1063954 gene locus_tag Alide2_1023 1065564 1063954 CDS product fumarate reductase/succinate dehydrogenase flavoprotein domain protein transl_table 11 protein_id gb|AEB83430.1||gnl|jgi|Alide2_1023 note PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal~KEGG: dia:Dtpsy_2809 fumarate reductase/succinate dehydrogenase flavoprotein domain protein inference protein motif:PFAM:PF00890 db_xref GO:0009055 db_xref GO:0016491 db_xref InterPro:IPR003953 1065659 1066666 gene locus_tag Alide2_1024 1065659 1066666 CDS product transcriptional regulator, Fis family transl_table 11 protein_id gb|AEB83431.1||gnl|jgi|Alide2_1024 note KEGG: ajs:Ajs_3485 AraC family transcriptional regulator~PFAM: HTH transcriptional regulator, AraC; Helix-turn-helix, Fis-type~SMART: Helix-turn-helix, AraC type, DNA binding domain inference protein motif:PFAM:PF00165 db_xref GO:0003700 db_xref GO:0043565 db_xref InterPro:IPR000005 db_xref InterPro:IPR002197 db_xref InterPro:IPR018060 1067468 1066752 gene locus_tag Alide2_1025 1067468 1066752 CDS product glutamine amidotransferase class-I transl_table 11 protein_id gb|AEB83432.1||gnl|jgi|Alide2_1025 note PFAM: Glutamine amidotransferase class-I, C-terminal~KEGG: tmz:Tmz1t_0983 glutamine amidotransferase inference protein motif:PFAM:PF00117 db_xref GO:0003824 db_xref InterPro:IPR000991 1068259 1067465 gene locus_tag Alide2_1026 1068259 1067465 CDS product protein of unknown function UPF0001 transl_table 11 protein_id gb|AEB83433.1||gnl|jgi|Alide2_1026 note KEGG: dac:Daci_3709 alanine racemase domain-containing protein~TIGRFAM: pyridoxal phosphate-dependent enzyme, YBL036C type~PFAM: Alanine racemase, N-terminal inference protein motif:TFAM:TIGR00044 db_xref InterPro:IPR001608 db_xref InterPro:IPR011078 1069473 1068256 gene locus_tag Alide2_1027 1069473 1068256 CDS product benzoate transporter transl_table 11 protein_id gb|AEB83434.1||gnl|jgi|Alide2_1027 note KEGG: dac:Daci_3710 benzoate transporter~TIGRFAM: Benzoate membrane transport protein~PFAM: Benzoate membrane transport protein inference protein motif:TFAM:TIGR00843 db_xref InterPro:IPR004711 1069563 1071035 gene locus_tag Alide2_1028 1069563 1071035 CDS product transcriptional regulator, GntR family with aminotransferase domain transl_table 11 protein_id gb|AEB83435.1||gnl|jgi|Alide2_1028 note KEGG: tmz:Tmz1t_0986 transcriptional regulator, GntR family with aminotransferase domain~PFAM: HTH transcriptional regulator, GntR; Aminotransferase, class I/classII~SMART: HTH transcriptional regulator, GntR inference protein motif:PFAM:PF00392 db_xref GO:0003700 db_xref GO:0030170 db_xref InterPro:IPR000524 db_xref InterPro:IPR004839 1071436 1071209 gene locus_tag Alide2_1029 1071436 1071209 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83436.1||gnl|jgi|Alide2_1029 note KEGG: dac:Daci_1842 hypothetical protein inference similar to AA sequence:KEGG:Daci_1842 1073522 1071453 gene locus_tag Alide2_1030 1073522 1071453 CDS product methionyl-tRNA synthetase EC_number 6.1.1.10 transl_table 11 protein_id gb|AEB83437.1||gnl|jgi|Alide2_1030 note TIGRFAM: Methionyl-tRNA synthetase, class Ia; Methionyl-tRNA synthetase, class Ia, beta subunit, C-terminal~KEGG: dia:Dtpsy_2806 methionyl-tRNA synthetase~PFAM: Aminoacyl-tRNA synthetase, class I (M); tRNA-binding domain inference protein motif:TFAM:TIGR00398 db_xref GO:0000166 db_xref GO:0004825 db_xref GO:0005524 db_xref InterPro:IPR002547 db_xref InterPro:IPR004495 db_xref InterPro:IPR014758 db_xref InterPro:IPR015413 1074843 1073602 gene locus_tag Alide2_1031 1074843 1073602 CDS product Patatin transl_table 11 protein_id gb|AEB83438.1||gnl|jgi|Alide2_1031 note PFAM: Patatin/Phospholipase A2-related~KEGG: dia:Dtpsy_2805 patatin inference protein motif:PFAM:PF01734 db_xref InterPro:IPR002641 1075443 1074868 gene locus_tag Alide2_1032 1075443 1074868 CDS product restriction endonuclease transl_table 11 protein_id gb|AEB83439.1||gnl|jgi|Alide2_1032 note PFAM: Restriction endonuclease, type IV-like, Mrr~KEGG: dia:Dtpsy_2804 restriction endonuclease inference protein motif:PFAM:PF04471 db_xref GO:0003677 db_xref GO:0004519 db_xref InterPro:IPR007560 1076679 1075630 gene locus_tag Alide2_1033 1076679 1075630 CDS product tRNA 2-selenouridine synthase transl_table 11 protein_id gb|AEB83440.1||gnl|jgi|Alide2_1033 note KEGG: dia:Dtpsy_2803 tRNA 2-selenouridine synthase~TIGRFAM: tRNA 2-selenouridine synthase~SMART: Rhodanese-like inference protein motif:TFAM:TIGR03167 db_xref GO:0008430 db_xref GO:0016786 db_xref InterPro:IPR001763 db_xref InterPro:IPR017582 1076738 1077799 gene locus_tag Alide2_1034 1076738 1077799 CDS product Selenide, water dikinase transl_table 11 protein_id gb|AEB83441.1||gnl|jgi|Alide2_1034 note TIGRFAM: Selenide water dikinase~HAMAP: Selenide, water dikinase, class I~KEGG: ajs:Ajs_3479 selenophosphate synthase~PFAM: AIR synthase-related protein; AIR synthase-related protein, C-terminal inference protein motif:HAMAP:MF_00625 db_xref InterPro:IPR000728 db_xref InterPro:IPR004536 db_xref InterPro:IPR010918 db_xref InterPro:IPR023061 1077796 1078869 gene locus_tag Alide2_1035 1077796 1078869 CDS product C4-dicarboxylate transporter/malic acid transport protein transl_table 11 protein_id gb|AEB83442.1||gnl|jgi|Alide2_1035 note PFAM: C4-dicarboxylate transporter/malic acid transport protein~KEGG: dia:Dtpsy_2801 C4-dicarboxylate transporter/malic acid transport protein inference protein motif:PFAM:PF03595 db_xref InterPro:IPR004695 1078936 1080027 gene locus_tag Alide2_1036 1078936 1080027 CDS product ATPase-like, ParA/MinD transl_table 11 protein_id gb|AEB83443.1||gnl|jgi|Alide2_1036 note PFAM: ATPase-like, ParA/MinD; Domain of unknown function DUF59~KEGG: ajs:Ajs_3476 hypothetical protein inference protein motif:PFAM:PF10609 db_xref InterPro:IPR002744 db_xref InterPro:IPR019591 1080213 1080716 gene locus_tag Alide2_1037 1080213 1080716 CDS product MaoC domain protein dehydratase transl_table 11 protein_id gb|AEB83444.1||gnl|jgi|Alide2_1037 note PFAM: MaoC-like dehydratase~KEGG: bpt:Bpet0844 hypothetical protein inference protein motif:PFAM:PF01575 db_xref GO:0016491 db_xref InterPro:IPR002539 1080766 1081746 gene locus_tag Alide2_1038 1080766 1081746 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83445.1||gnl|jgi|Alide2_1038 note KEGG: vap:Vapar_0801 hypothetical protein inference similar to AA sequence:KEGG:Vapar_0801 db_xref InterPro:IPR005064 1081754 1083205 gene locus_tag Alide2_1039 1081754 1083205 CDS product MmgE/PrpD family protein transl_table 11 protein_id gb|AEB83446.1||gnl|jgi|Alide2_1039 note PFAM: MmgE/PrpD~KEGG: bpt:Bpet0850 hypothetical protein inference protein motif:PFAM:PF03972 db_xref GO:0047547 db_xref InterPro:IPR005656 1083202 1084374 gene locus_tag Alide2_1040 1083202 1084374 CDS product Isovaleryl-CoA dehydrogenase EC_number 1.3.99.10 transl_table 11 protein_id gb|AEB83447.1||gnl|jgi|Alide2_1040 note KEGG: bpt:Bpet0851 acyl-CoA dehydrogenase~PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal inference protein motif:PRIAM:1.3.99.10 db_xref InterPro:IPR006090 db_xref InterPro:IPR006091 db_xref InterPro:IPR006092 1084371 1085600 gene locus_tag Alide2_1041 1084371 1085600 CDS product Formyl-CoA transferase EC_number 2.8.3.16 transl_table 11 protein_id gb|AEB83448.1||gnl|jgi|Alide2_1041 note KEGG: bpt:Bpet0852 hypothetical protein~PFAM: CoA-transferase family III inference protein motif:PRIAM:2.8.3.16 db_xref InterPro:IPR003673 1085597 1086412 gene locus_tag Alide2_1042 1085597 1086412 CDS product transcriptional regulator, GntR family with UTRA sensor domain transl_table 11 protein_id gb|AEB83449.1||gnl|jgi|Alide2_1042 note KEGG: bpt:Bpet0853 GntR family transcriptional regulator~PFAM: HTH transcriptional regulator, GntR; UbiC transcription regulator-associated~SMART: HTH transcriptional regulator, GntR; UbiC transcription regulator-associated inference protein motif:PFAM:PF00392 db_xref GO:0003677 db_xref GO:0003700 db_xref GO:0030528 db_xref InterPro:IPR000524 db_xref InterPro:IPR011663 1086409 1087611 gene locus_tag Alide2_1043 1086409 1087611 CDS product major facilitator superfamily MFS_1 transl_table 11 protein_id gb|AEB83450.1||gnl|jgi|Alide2_1043 note PFAM: Major facilitator superfamily MFS-1~KEGG: rfr:Rfer_4176 major facilitator transporter inference protein motif:PFAM:PF07690 db_xref InterPro:IPR011701 1087642 1088448 gene locus_tag Alide2_1044 1087642 1088448 CDS product HpcH/HpaI aldolase transl_table 11 protein_id gb|AEB83451.1||gnl|jgi|Alide2_1044 note PFAM: Aldehyde-lyase domain~KEGG: bpy:Bphyt_0618 citrate (pro-3S)-lyase inference protein motif:PFAM:PF03328 db_xref GO:0016830 db_xref InterPro:IPR005000 1088562 1090463 gene locus_tag Alide2_1045 1088562 1090463 CDS product Respiratory-chain NADH dehydrogenase domain 51 kDa subunit transl_table 11 protein_id gb|AEB83452.1||gnl|jgi|Alide2_1045 note KEGG: dia:Dtpsy_2798 respiratory-chain NADH dehydrogenase domain 51 kDa subunit~PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; NADH:ubiquinone oxidoreductase, 24kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding~SMART: NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding inference protein motif:PFAM:PF01512 db_xref GO:0010181 db_xref GO:0016491 db_xref GO:0051287 db_xref InterPro:IPR002023 db_xref InterPro:IPR011538 db_xref InterPro:IPR019554 db_xref InterPro:IPR019575 1090460 1093321 gene locus_tag Alide2_1046 1090460 1093321 CDS product formate dehydrogenase, alpha subunit EC_number 1.7.99.4 transl_table 11 protein_id gb|AEB83453.1||gnl|jgi|Alide2_1046 note SMART: Molybdopterin oxidoreductase, Fe4S4 domain~TIGRFAM: Formate dehydrogenase, alpha subunit~KEGG: dia:Dtpsy_2797 formate dehydrogenase, alpha subunit~PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase, Fe4S4 domain; Ferredoxin; 4Fe-4S binding domain; Molydopterin dinucleotide-binding domain inference protein motif:TFAM:TIGR01591 db_xref GO:0008863 db_xref InterPro:IPR001041 db_xref InterPro:IPR001450 db_xref InterPro:IPR006478 db_xref InterPro:IPR006656 db_xref InterPro:IPR006657 db_xref InterPro:IPR006963 1093332 1093895 gene locus_tag Alide2_1047 1093332 1093895 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83454.1||gnl|jgi|Alide2_1047 note manually curated~KEGG: dia:Dtpsy_2796 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_2796 1093888 1094496 gene locus_tag Alide2_1048 1093888 1094496 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83455.1||gnl|jgi|Alide2_1048 note KEGG: ajs:Ajs_3468 hypothetical protein inference similar to AA sequence:KEGG:Ajs_3468 1094456 1096519 gene locus_tag Alide2_1049 1094456 1096519 CDS product 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein transl_table 11 protein_id gb|AEB83456.1||gnl|jgi|Alide2_1049 note PFAM: 4Fe-4S binding domain~KEGG: ajs:Ajs_3467 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein inference protein motif:PFAM:PF00037 db_xref GO:0009055 db_xref GO:0051536 db_xref InterPro:IPR001450 1096516 1097151 gene locus_tag Alide2_1050 1096516 1097151 CDS product cytoplasmic chaperone TorD family protein transl_table 11 protein_id gb|AEB83457.1||gnl|jgi|Alide2_1050 note KEGG: dia:Dtpsy_2793 cytoplasmic chaperone TorD family protein inference similar to AA sequence:KEGG:Dtpsy_2793 1097287 1097499 gene locus_tag Alide2_1051 1097287 1097499 CDS product formate dehydrogenase region TAT target transl_table 11 protein_id gb|AEB83458.1||gnl|jgi|Alide2_1051 note TIGRFAM: Formate dehydrogenase, TAT signal-containing~KEGG: dia:Dtpsy_2792 formate dehydrogenase region TAT target inference protein motif:TFAM:TIGR02811 db_xref InterPro:IPR014177 1097521 1100493 gene locus_tag Alide2_1052 1097521 1100493 CDS product Nitrate reductase EC_number 1.7.99.4 transl_table 11 protein_id gb|AEB83459.1||gnl|jgi|Alide2_1052 note PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase, Fe4S4 domain; Molydopterin dinucleotide-binding domain~KEGG: dia:Dtpsy_2791 molybdopterin oxidoreductase~SMART: Molybdopterin oxidoreductase, Fe4S4 domain inference protein motif:PRIAM:1.7.99.4 db_xref InterPro:IPR006311 db_xref InterPro:IPR006656 db_xref InterPro:IPR006657 db_xref InterPro:IPR006963 1100521 1101141 gene locus_tag Alide2_1053 1100521 1101141 CDS product 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein transl_table 11 protein_id gb|AEB83460.1||gnl|jgi|Alide2_1053 note PFAM: 4Fe-4S binding domain~KEGG: dia:Dtpsy_2790 4Fe-4S ferredoxin iron-sulfur binding domain protein inference protein motif:PFAM:PF00037 db_xref GO:0009055 db_xref GO:0051536 db_xref InterPro:IPR001450 1101138 1101371 gene locus_tag Alide2_1054 1101138 1101371 CDS product putative lipoprotein transl_table 11 protein_id gb|AEB83461.1||gnl|jgi|Alide2_1054 note KEGG: dia:Dtpsy_2789 putative lipoprotein inference similar to AA sequence:KEGG:Dtpsy_2789 1101385 1102581 gene locus_tag Alide2_1055 1101385 1102581 CDS product formate dehydrogenase, gamma subunit transl_table 11 protein_id gb|AEB83462.1||gnl|jgi|Alide2_1055 note KEGG: ajs:Ajs_3461 formate dehydrogenase gamma subunit~TIGRFAM: Formate dehydrogenase, gamma subunit~PFAM: Cytochrome b/b6, N-terminal inference protein motif:TFAM:TIGR01583 db_xref GO:0008863 db_xref InterPro:IPR005797 db_xref InterPro:IPR006471 1102578 1102898 gene locus_tag Alide2_1056 1102578 1102898 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83463.1||gnl|jgi|Alide2_1056 note KEGG: dia:Dtpsy_2787 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_2787 1102978 1103844 gene locus_tag Alide2_1057 1102978 1103844 CDS product formate dehydrogenase subunit FdhD transl_table 11 protein_id gb|AEB83464.1||gnl|jgi|Alide2_1057 note PFAM: Formate dehydrogenase, subunit FdhD~KEGG: dia:Dtpsy_2786 formate dehydrogenase subunit FdhD inference protein motif:PFAM:PF02634 db_xref GO:0008863 db_xref InterPro:IPR003786 1103854 1106385 gene locus_tag Alide2_1058 1103854 1106385 CDS product protein of unknown function DUF214 transl_table 11 protein_id gb|AEB83465.1||gnl|jgi|Alide2_1058 note PFAM: Domain of unknown function DUF214, ABC transporter permease~KEGG: dia:Dtpsy_2785 protein of unknown function DUF214 inference protein motif:PFAM:PF02687 db_xref InterPro:IPR003838 1106388 1106615 gene locus_tag Alide2_1059 1106388 1106615 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83466.1||gnl|jgi|Alide2_1059 note KEGG: dia:Dtpsy_2784 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_2784 1106669 1108225 gene locus_tag Alide2_1060 1106669 1108225 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83467.1||gnl|jgi|Alide2_1060 note KEGG: ajs:Ajs_3456 hypothetical protein inference similar to AA sequence:KEGG:Ajs_3456 1108269 1108661 gene locus_tag Alide2_1061 1108269 1108661 CDS product transcriptional regulator, TraR/DksA family transl_table 11 protein_id gb|AEB83468.1||gnl|jgi|Alide2_1061 note KEGG: dia:Dtpsy_2782 transcriptional regulator, TraR/DksA family inference similar to AA sequence:KEGG:Dtpsy_2782 db_xref InterPro:IPR000962 1108661 1109098 gene locus_tag Alide2_1062 1108661 1109098 CDS product globin transl_table 11 protein_id gb|AEB83469.1||gnl|jgi|Alide2_1062 note PFAM: Globin, truncated bacterial-like~KEGG: ajs:Ajs_3454 globin inference protein motif:PFAM:PF01152 db_xref GO:0019825 db_xref InterPro:IPR001486 1109906 1109148 gene locus_tag Alide2_1063 1109906 1109148 CDS product transcriptional regulator, GntR family with UTRA sensor domain transl_table 11 protein_id gb|AEB83470.1||gnl|jgi|Alide2_1063 note KEGG: reu:Reut_B4840 GntR family transcriptional regulator~PFAM: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR~SMART: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR inference protein motif:PFAM:PF07702 db_xref GO:0003677 db_xref GO:0003700 db_xref GO:0030528 db_xref InterPro:IPR000524 db_xref InterPro:IPR011663 1110854 1110000 gene locus_tag Alide2_1064 1110854 1110000 CDS product isocitrate lyase and phosphorylmutase transl_table 11 protein_id gb|AEB83471.1||gnl|jgi|Alide2_1064 note PFAM: Isocitrate lyase/phosphorylmutase~KEGG: reu:Reut_B4841 2,3-dimethylmalate lyase inference protein motif:PFAM:PF00463 db_xref GO:0003824 db_xref InterPro:IPR000918 1111420 1110851 gene locus_tag Alide2_1065 1111420 1110851 CDS product 3-isopropylmalate dehydratase, small subunit transl_table 11 protein_id gb|AEB83472.1||gnl|jgi|Alide2_1065 note KEGG: reu:Reut_B4842 3-isopropylmalate dehydratase, small subunit~TIGRFAM: 3-isopropylmalate dehydratase, small subunit, subgroup~PFAM: Aconitase A/isopropylmalate dehydratase small subunit, swivel inference protein motif:TFAM:TIGR02087 db_xref GO:0003861 db_xref InterPro:IPR000573 db_xref InterPro:IPR011827 1112697 1111417 gene locus_tag Alide2_1066 1112697 1111417 CDS product homoaconitate hydratase family protein transl_table 11 protein_id gb|AEB83473.1||gnl|jgi|Alide2_1066 note KEGG: xtr:100490803 isopropylmalate/citramalate isomerase large subunit-like~TIGRFAM: Homoaconitase/3-isopropylmalate dehydratase, large subunit, subgroup~PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha inference protein motif:TFAM:TIGR01343 db_xref GO:0016836 db_xref InterPro:IPR001030 db_xref InterPro:IPR006251 1113662 1112694 gene locus_tag Alide2_1067 1113662 1112694 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83474.1||gnl|jgi|Alide2_1067 note KEGG: xtr:100490977 UPF0065 protein in tcbD-tcbE intergenic region-like inference similar to AA sequence:KEGG:100490977 db_xref InterPro:IPR005064 1114410 1113760 gene locus_tag Alide2_1068 1114410 1113760 CDS product Smr protein/MutS2 transl_table 11 protein_id gb|AEB83475.1||gnl|jgi|Alide2_1068 note KEGG: dia:Dtpsy_2779 Smr protein/MutS2~PFAM: Smr protein/MutS2 C-terminal~SMART: Smr protein/MutS2 C-terminal inference protein motif:PFAM:PF01713 db_xref InterPro:IPR002625 1115567 1114407 gene locus_tag Alide2_1069 1115567 1114407 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83476.1||gnl|jgi|Alide2_1069 note KEGG: dia:Dtpsy_2778 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_2778 1116277 1115564 gene locus_tag Alide2_1070 1116277 1115564 CDS product DNA repair protein RadC transl_table 11 protein_id gb|AEB83477.1||gnl|jgi|Alide2_1070 note KEGG: ajs:Ajs_3450 DNA repair protein RadC~TIGRFAM: Uncharacterised protein family UPF0758~PFAM: Uncharacterised protein family UPF0758 inference protein motif:TFAM:TIGR00608 db_xref InterPro:IPR001405 1116359 1116835 gene locus_tag Alide2_1071 1116359 1116835 CDS product peptidylprolyl isomerase FKBP-type transl_table 11 protein_id gb|AEB83478.1||gnl|jgi|Alide2_1071 note PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type~KEGG: dia:Dtpsy_2776 peptidylprolyl isomerase FKBP-type inference protein motif:PFAM:PF00254 db_xref InterPro:IPR001179 1116841 1117824 gene locus_tag Alide2_1072 1116841 1117824 CDS product 4-hydroxy-3-methylbut-2-enyl diphosphate reductase EC_number 1.17.1.2 transl_table 11 protein_id gb|AEB83479.1||gnl|jgi|Alide2_1072 note PFAM: LytB protein~TIGRFAM: LytB protein~HAMAP: LytB protein~KEGG: ajs:Ajs_3448 4-hydroxy-3-methylbut-2-enyl diphosphate reductase inference protein motif:HAMAP:MF_00191 db_xref InterPro:IPR003451 1118032 1119360 gene locus_tag Alide2_1073 1118032 1119360 CDS product protein of unknown function DUF21 transl_table 11 protein_id gb|AEB83480.1||gnl|jgi|Alide2_1073 note KEGG: ajs:Ajs_3447 hypothetical protein~PFAM: Domain of unknown function DUF21; Cystathionine beta-synthase, core; Transporter-associated domain~SMART: Cystathionine beta-synthase, core inference protein motif:PFAM:PF01595 db_xref InterPro:IPR000644 db_xref InterPro:IPR002550 db_xref InterPro:IPR005170 1120059 1119382 gene locus_tag Alide2_1074 1120059 1119382 CDS product putative signal transduction protein with CBS domains transl_table 11 protein_id gb|AEB83481.1||gnl|jgi|Alide2_1074 note KEGG: aav:Aave_3769 CBS domain-containing protein~PFAM: Cystathionine beta-synthase, core~SMART: Cystathionine beta-synthase, core inference protein motif:PFAM:PF00571 db_xref InterPro:IPR000644 1120112 1121428 gene locus_tag Alide2_1075 1120112 1121428 CDS product Seryl-tRNA synthetase EC_number 6.1.1.11 transl_table 11 protein_id gb|AEB83482.1||gnl|jgi|Alide2_1075 note PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; Seryl-tRNA synthetase, class IIa, N-terminal~TIGRFAM: Seryl-tRNA synthetase, class IIa~HAMAP: Seryl-tRNA synthetase, class IIa~KEGG: dia:Dtpsy_2772 seryl-tRNA synthetase inference protein motif:HAMAP:MF_00176 db_xref InterPro:IPR002314 db_xref InterPro:IPR002317 db_xref InterPro:IPR015866 1121486 1122427 gene locus_tag Alide2_1076 1121486 1122427 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83483.1||gnl|jgi|Alide2_1076 note KEGG: dac:Daci_5376 hypothetical protein inference similar to AA sequence:KEGG:Daci_5376 1122490 1122574 gene locus_tag Alide2_R0011 note tRNA-Ser1 1122490 1122574 tRNA product tRNA-Ser 1122953 1122666 gene locus_tag Alide2_1077 1122953 1122666 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83484.1||gnl|jgi|Alide2_1077 note KEGG: mca:MCA1626 hypothetical protein inference similar to AA sequence:KEGG:MCA1626 1123474 1122950 gene locus_tag Alide2_1078 1123474 1122950 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83485.1||gnl|jgi|Alide2_1078 inference ab initio prediction:Prodigal:1.4 1124783 1123488 gene locus_tag Alide2_1079 1124783 1123488 CDS product integrase family protein transl_table 11 protein_id gb|AEB83486.1||gnl|jgi|Alide2_1079 note PFAM: Integrase, catalytic core, phage~KEGG: pol:Bpro_0966 phage integrase inference protein motif:PFAM:PF00589 db_xref GO:0003677 db_xref InterPro:IPR002104 1125864 1125367 gene locus_tag Alide2_1080 1125864 1125367 CDS product protein of unknown function DUF1643 transl_table 11 protein_id gb|AEB83487.1||gnl|jgi|Alide2_1080 note PFAM: Protein of unknown function DUF1643~KEGG: mtt:Ftrac_0456 hypothetical protein inference protein motif:PFAM:PF07799 db_xref InterPro:IPR012441 1125984 1126217 gene locus_tag Alide2_1081 1125984 1126217 CDS product helix-turn-helix domain protein transl_table 11 protein_id gb|AEB83488.1||gnl|jgi|Alide2_1081 note manually curated~PFAM: Helix-turn-helix type 3~KEGG: pde:Pden_0455 helix-turn-helix domain-containing protein~SMART: Helix-turn-helix type 3 inference protein motif:PFAM:PF01381 db_xref GO:0043565 db_xref InterPro:IPR001387 1129488 1127083 gene locus_tag Alide2_1082 1129488 1127083 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83489.1||gnl|jgi|Alide2_1082 note KEGG: ppn:Palpr_2996 hypothetical protein inference similar to AA sequence:KEGG:Palpr_2996 1131000 1129735 gene locus_tag Alide2_1083 1131000 1129735 CDS product AAA ATPase transl_table 11 protein_id gb|AEB83490.1||gnl|jgi|Alide2_1083 note KEGG: pol:Bpro_0961 hypothetical protein~manually curated~SMART: ATPase, AAA+ type, core inference protein motif:SMART:SM00382 db_xref GO:0000166 db_xref GO:0017111 db_xref InterPro:IPR003593 1131551 1131291 gene locus_tag Alide2_1084 1131551 1131291 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83491.1||gnl|jgi|Alide2_1084 inference ab initio prediction:Prodigal:1.4 1132086 1132937 gene locus_tag Alide2_1085 1132086 1132937 CDS product FRG domain protein transl_table 11 protein_id gb|AEB83492.1||gnl|jgi|Alide2_1085 note KEGG: app:CAP2UW1_1805 FRG domain protein~PFAM: FRG domain~SMART: FRG domain inference protein motif:PFAM:PF08867 db_xref InterPro:IPR014966 1133204 1132989 gene locus_tag Alide2_1086 1133204 1132989 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83493.1||gnl|jgi|Alide2_1086 note KEGG: rva:Rvan_1233 hypothetical protein inference similar to AA sequence:KEGG:Rvan_1233 1133301 1133432 gene locus_tag Alide2_1087 pseudo 1133490 1134431 gene locus_tag Alide2_1088 1133490 1134431 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83494.1||gnl|jgi|Alide2_1088 note KEGG: dac:Daci_5376 hypothetical protein inference similar to AA sequence:KEGG:Daci_5376 1134494 1134583 gene locus_tag Alide2_R0012 note tRNA-Ser2 1134494 1134583 tRNA product tRNA-Ser 1134699 1136636 gene locus_tag Alide2_1089 1134699 1136636 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83495.1||gnl|jgi|Alide2_1089 note KEGG: rfr:Rfer_0701 hypothetical protein inference similar to AA sequence:KEGG:Rfer_0701 1136819 1138213 gene locus_tag Alide2_1090 1136819 1138213 CDS product exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase EC_number 2.7.8.6 transl_table 11 protein_id gb|AEB83496.1||gnl|jgi|Alide2_1090 note TIGRFAM: Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; Sugar transferase, PEP-CTERM system associated~KEGG: rfr:Rfer_0702 undecaprenyl-phosphate galactosephosphotransferase~PFAM: Bacterial sugar transferase inference protein motif:TFAM:TIGR03025 db_xref InterPro:IPR003362 db_xref InterPro:IPR017464 db_xref InterPro:IPR017475 1140556 1138250 gene locus_tag Alide2_1091 1140556 1138250 CDS product multi-sensor signal transduction histidine kinase transl_table 11 protein_id gb|AEB83497.1||gnl|jgi|Alide2_1091 note KEGG: dac:Daci_5418 histidine kinase~PFAM: CHASE2; ATPase-like, ATP-binding domain~SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS inference protein motif:PFAM:PF05226 db_xref GO:0005524 db_xref InterPro:IPR000014 db_xref InterPro:IPR003594 db_xref InterPro:IPR003661 db_xref InterPro:IPR007890 1142249 1140597 gene locus_tag Alide2_1092 1142249 1140597 CDS product FecR protein transl_table 11 protein_id gb|AEB83498.1||gnl|jgi|Alide2_1092 note KEGG: dac:Daci_5417 peptidoglycan-binding LysM~PFAM: FecR protein; Peptidoglycan-binding lysin domain~SMART: Peptidoglycan-binding Lysin subgroup inference protein motif:PFAM:PF04773 db_xref InterPro:IPR002482 db_xref InterPro:IPR006860 db_xref InterPro:IPR018392 1143104 1142373 gene locus_tag Alide2_1093 1143104 1142373 CDS product two component transcriptional regulator, winged helix family transl_table 11 protein_id gb|AEB83499.1||gnl|jgi|Alide2_1093 note KEGG: ctt:CtCNB1_0831 two component transcriptional regulator, winged~PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal~SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal inference protein motif:PFAM:PF00072 db_xref GO:0000156 db_xref GO:0003677 db_xref InterPro:IPR001789 db_xref InterPro:IPR001867 1144587 1143283 gene locus_tag Alide2_1094 1144587 1143283 CDS product tryptophanyl-tRNA synthetase EC_number 6.1.1.2 transl_table 11 protein_id gb|AEB83500.1||gnl|jgi|Alide2_1094 note TIGRFAM: Tryptophanyl-tRNA synthetase, class Ib~KEGG: dia:Dtpsy_2771 tryptophanyl-tRNA synthetase~PFAM: Aminoacyl-tRNA synthetase, class Ib inference protein motif:TFAM:TIGR00233 db_xref GO:0000166 db_xref GO:0004830 db_xref GO:0005524 db_xref InterPro:IPR002305 db_xref InterPro:IPR002306 1145267 1144599 gene locus_tag Alide2_1095 1145267 1144599 CDS product peptidase M50 transl_table 11 protein_id gb|AEB83501.1||gnl|jgi|Alide2_1095 note PFAM: Peptidase M50~KEGG: dia:Dtpsy_2770 peptidase M50 inference protein motif:PFAM:PF02163 db_xref GO:0004222 db_xref InterPro:IPR008915 1145386 1146558 gene locus_tag Alide2_1096 1145386 1146558 CDS product methyl-accepting chemotaxis sensory transducer transl_table 11 protein_id gb|AEB83502.1||gnl|jgi|Alide2_1096 note KEGG: dac:Daci_5413 methyl-accepting chemotaxis sensory transducer~PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain~SMART: Chemotaxis methyl-accepting receptor, signalling inference protein motif:PFAM:PF00015 db_xref GO:0004871 db_xref InterPro:IPR003660 db_xref InterPro:IPR004089 1147277 1146642 gene locus_tag Alide2_1097 1147277 1146642 CDS product Sua5/YciO/YrdC/YwlC family protein transl_table 11 protein_id gb|AEB83503.1||gnl|jgi|Alide2_1097 note KEGG: dia:Dtpsy_2764 SUA5/YciO/YrdC/YwlC family protein~TIGRFAM: Sua5/YciO/YrdC/YwlC~PFAM: Sua5/YciO/YrdC, N-terminal inference protein motif:TFAM:TIGR00057 db_xref InterPro:IPR004388 db_xref InterPro:IPR006070 1148251 1147283 gene locus_tag Alide2_1098 1148251 1147283 CDS product PHP domain protein transl_table 11 protein_id gb|AEB83504.1||gnl|jgi|Alide2_1098 note KEGG: dia:Dtpsy_2763 PHP domain protein~PFAM: PHP, C-terminal~SMART: Polymerase/histidinol phosphatase, N-terminal inference protein motif:PFAM:PF02811 db_xref GO:0003824 db_xref InterPro:IPR003141 db_xref InterPro:IPR004013 1148336 1150099 gene locus_tag Alide2_1099 1148336 1150099 CDS product methyl-accepting chemotaxis sensory transducer transl_table 11 protein_id gb|AEB83505.1||gnl|jgi|Alide2_1099 note KEGG: ajs:Ajs_3430 methyl-accepting chemotaxis sensory transducer~PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain~SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain inference protein motif:PFAM:PF00015 db_xref GO:0004871 db_xref InterPro:IPR003660 db_xref InterPro:IPR004089 1151875 1150160 gene locus_tag Alide2_1100 1151875 1150160 CDS product single-stranded-DNA-specific exonuclease RecJ transl_table 11 protein_id gb|AEB83506.1||gnl|jgi|Alide2_1100 note KEGG: ajs:Ajs_3424 single-stranded-DNA-specific exonuclease RecJ~TIGRFAM: Bacterial RecJ exonuclease~PFAM: Phosphoesterase, RecJ-like; Phosphoesterase, DHHA1 inference protein motif:TFAM:TIGR00644 db_xref GO:0008409 db_xref InterPro:IPR001667 db_xref InterPro:IPR003156 db_xref InterPro:IPR004610 1152822 1151872 gene locus_tag Alide2_1101 1152822 1151872 CDS product 2,3-bisphosphoglycerate-independent phosphoglycerate mutase transl_table 11 protein_id gb|AEB83507.1||gnl|jgi|Alide2_1101 note PFAM: Bisphosphoglycerate-independent phosphoglycerate mutase~KEGG: dia:Dtpsy_2757 hypothetical protein inference protein motif:PFAM:PF10143 db_xref InterPro:IPR019304 1152919 1154172 gene locus_tag Alide2_1102 1152919 1154172 CDS product lipoprotein releasing system, transmembrane protein, LolC/E family transl_table 11 protein_id gb|AEB83508.1||gnl|jgi|Alide2_1102 note manually curated~TIGRFAM: Lipoprotein releasing system, transmembrane protein, LolC/E family~KEGG: dia:Dtpsy_2755 lipoprotein releasing system, transmembrane protein, LolC/E family~PFAM: Domain of unknown function DUF214, ABC transporter permease inference protein motif:TFAM:TIGR02212 db_xref InterPro:IPR003838 db_xref InterPro:IPR011925 1154165 1154851 gene locus_tag Alide2_1103 1154165 1154851 CDS product lipoprotein releasing system, ATP-binding protein EC_number 3.6.3.28 transl_table 11 protein_id gb|AEB83509.1||gnl|jgi|Alide2_1103 note SMART: ATPase, AAA+ type, core~TIGRFAM: Lipoprotein releasing system, ATP-binding protein~KEGG: dia:Dtpsy_2754 lipoprotein releasing system, ATP-binding protein~PFAM: ABC transporter-like inference protein motif:TFAM:TIGR02211 db_xref GO:0005524 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 db_xref InterPro:IPR011924 1155282 1154980 gene locus_tag Alide2_1104 1155282 1154980 CDS product cytochrome c class I transl_table 11 protein_id gb|AEB83510.1||gnl|jgi|Alide2_1104 note PFAM: Cytochrome c, class I~KEGG: dia:Dtpsy_0985 cytochrome c class I inference protein motif:PFAM:PF00034 db_xref GO:0005506 db_xref GO:0009055 db_xref GO:0020037 db_xref InterPro:IPR003088 1155390 1155632 gene locus_tag Alide2_1105 1155390 1155632 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83511.1||gnl|jgi|Alide2_1105 note KEGG: dia:Dtpsy_0986 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_0986 1157348 1155657 gene locus_tag Alide2_1106 1157348 1155657 CDS product dihydroxy-acid dehydratase EC_number 4.2.1.9 transl_table 11 protein_id gb|AEB83512.1||gnl|jgi|Alide2_1106 note TIGRFAM: Dihydroxy-acid dehydratase~KEGG: dia:Dtpsy_0987 dihydroxy-acid dehydratase~PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase inference protein motif:TFAM:TIGR00110 db_xref GO:0004160 db_xref InterPro:IPR000581 db_xref InterPro:IPR004404 1157577 1159433 gene locus_tag Alide2_1107 1157577 1159433 CDS product dihydroxy-acid dehydratase EC_number 4.2.1.9 transl_table 11 protein_id gb|AEB83513.1||gnl|jgi|Alide2_1107 note TIGRFAM: Dihydroxy-acid dehydratase~KEGG: dia:Dtpsy_0988 dihydroxy-acid dehydratase~PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase inference protein motif:TFAM:TIGR00110 db_xref GO:0004160 db_xref InterPro:IPR000581 db_xref InterPro:IPR004404 1159574 1160002 gene locus_tag Alide2_1108 1159574 1160002 CDS product phenylacetic acid degradation-related protein transl_table 11 protein_id gb|AEB83514.1||gnl|jgi|Alide2_1108 note KEGG: dia:Dtpsy_0989 thioesterase superfamily protein~TIGRFAM: Phenylacetic acid degradation-related protein~PFAM: Thioesterase superfamily inference protein motif:TFAM:TIGR00369 db_xref InterPro:IPR003736 db_xref InterPro:IPR006683 1160472 1160005 gene locus_tag Alide2_1109 1160472 1160005 CDS product bacterioferritin transl_table 11 protein_id gb|AEB83515.1||gnl|jgi|Alide2_1109 note KEGG: dia:Dtpsy_0990 bacterioferritin~TIGRFAM: Bacterioferritin~PFAM: Ferritin/Dps protein inference protein motif:TFAM:TIGR00754 db_xref GO:0008199 db_xref InterPro:IPR002024 db_xref InterPro:IPR008331 1160572 1161387 gene locus_tag Alide2_1110 1160572 1161387 CDS product prolipoprotein diacylglyceryl transferase transl_table 11 protein_id gb|AEB83516.1||gnl|jgi|Alide2_1110 note KEGG: dia:Dtpsy_0991 prolipoprotein diacylglyceryl transferase~TIGRFAM: Prolipoprotein diacylglyceryl transferase~PFAM: Prolipoprotein diacylglyceryl transferase inference protein motif:TFAM:TIGR00544 db_xref GO:0008199 db_xref InterPro:IPR001640 1161596 1162264 gene locus_tag Alide2_1111 1161596 1162264 CDS product transcriptional regulator, GntR family transl_table 11 protein_id gb|AEB83517.1||gnl|jgi|Alide2_1111 note KEGG: dia:Dtpsy_0992 transcriptional regulator, GntR family~PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR~SMART: HTH transcriptional regulator, GntR; GntR, C-terminal inference protein motif:PFAM:PF07729 db_xref GO:0003700 db_xref InterPro:IPR000524 db_xref InterPro:IPR011711 1162261 1163688 gene locus_tag Alide2_1112 1162261 1163688 CDS product Malonyl-CoA decarboxylase EC_number 4.1.1.9 transl_table 11 protein_id gb|AEB83518.1||gnl|jgi|Alide2_1112 note KEGG: ajs:Ajs_1077 malonyl-CoA decarboxylase~PFAM: Malonyl-CoA decarboxylase inference protein motif:PRIAM:4.1.1.9 db_xref InterPro:IPR007956 1163752 1164774 gene locus_tag Alide2_1113 1163752 1164774 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83519.1||gnl|jgi|Alide2_1113 note KEGG: dia:Dtpsy_0994 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_0994 db_xref InterPro:IPR005064 db_xref InterPro:IPR006311 1164784 1165605 gene locus_tag Alide2_1114 1164784 1165605 CDS product Enoyl-CoA hydratase/isomerase transl_table 11 protein_id gb|AEB83520.1||gnl|jgi|Alide2_1114 note PFAM: Crotonase, core~KEGG: ajs:Ajs_1079 enoyl-CoA hydratase/isomerase inference protein motif:PFAM:PF00378 db_xref GO:0003824 db_xref InterPro:IPR001753 1165616 1167169 gene locus_tag Alide2_1115 1165616 1167169 CDS product o-succinylbenzoate--CoA ligase EC_number 6.2.1.26 transl_table 11 protein_id gb|AEB83521.1||gnl|jgi|Alide2_1115 note KEGG: dia:Dtpsy_0996 malonyl-CoA synthase~PFAM: AMP-dependent synthetase/ligase inference protein motif:PRIAM:6.2.1.26 db_xref InterPro:IPR000873 1167722 1167279 gene locus_tag Alide2_1116 1167722 1167279 CDS product UspA domain-containing protein transl_table 11 protein_id gb|AEB83522.1||gnl|jgi|Alide2_1116 note PFAM: UspA~KEGG: dia:Dtpsy_0997 UspA domain protein inference protein motif:PFAM:PF00582 db_xref InterPro:IPR006016 1167885 1170221 gene locus_tag Alide2_1117 1167885 1170221 CDS product heavy metal translocating P-type ATPase EC_number 3.6.3.4 transl_table 11 protein_id gb|AEB83523.1||gnl|jgi|Alide2_1117 note TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter~KEGG: dia:Dtpsy_0998 heavy metal translocating P-type ATPase~PFAM: ATPase, P-type, ATPase-associated domain; Heavy metal transport/detoxification protein; Haloacid dehalogenase-like hydrolase inference protein motif:TFAM:TIGR01525 db_xref GO:0005524 db_xref InterPro:IPR001757 db_xref InterPro:IPR005834 db_xref InterPro:IPR006121 db_xref InterPro:IPR006416 db_xref InterPro:IPR008250 1170224 1170361 gene locus_tag Alide2_1118 1170224 1170361 CDS product cytochrome oxidase maturation protein, cbb3-type transl_table 11 protein_id gb|AEB83524.1||gnl|jgi|Alide2_1118 note KEGG: dia:Dtpsy_0999 cytochrome oxidase maturation protein, cbb3-type~TIGRFAM: Cytochrome oxidase maturation protein cbb3-type~PFAM: Cytochrome oxidase maturation protein cbb3-type inference protein motif:TFAM:TIGR00847 db_xref InterPro:IPR004714 1170428 1171867 gene locus_tag Alide2_1119 1170428 1171867 CDS product cytochrome c oxidase, cbb3-type, subunit I EC_number 1.9.3.1 transl_table 11 protein_id gb|AEB83525.1||gnl|jgi|Alide2_1119 note TIGRFAM: Cytochrome c oxidase cbb3-type, subunit I~KEGG: dia:Dtpsy_1000 cbb3-type cytochrome c oxidase subunit I~PFAM: Cytochrome c oxidase, subunit I inference protein motif:TFAM:TIGR00780 db_xref GO:0004129 db_xref InterPro:IPR000883 db_xref InterPro:IPR004677 1171887 1172519 gene locus_tag Alide2_1120 1171887 1172519 CDS product cytochrome c oxidase, cbb3-type, subunit II transl_table 11 protein_id gb|AEB83526.1||gnl|jgi|Alide2_1120 note KEGG: dia:Dtpsy_1001 cbb3-type cytochrome c oxidase subunit II~TIGRFAM: Cytochrome c oxidase, monohaem subunit/FixO~PFAM: Cytochrome c oxidase, monohaem subunit/FixO inference protein motif:TFAM:TIGR00781 db_xref InterPro:IPR003468 1172540 1172677 gene locus_tag Alide2_1121 1172540 1172677 CDS product Cbb3-type cytochrome oxidase component transl_table 11 protein_id gb|AEB83527.1||gnl|jgi|Alide2_1121 note KEGG: dia:Dtpsy_1002 Cbb3-type cytochrome oxidase component inference similar to AA sequence:KEGG:Dtpsy_1002 db_xref InterPro:IPR008621 1172707 1173621 gene locus_tag Alide2_1122 1172707 1173621 CDS product cytochrome c oxidase, cbb3-type, subunit III transl_table 11 protein_id gb|AEB83528.1||gnl|jgi|Alide2_1122 note KEGG: ajs:Ajs_1087 cytochrome c oxidase, cbb3-type, subunit III~TIGRFAM: Cytochrome c oxidase cbb3-type, subunit III~PFAM: Cytochrome c, class I inference protein motif:TFAM:TIGR00782 db_xref InterPro:IPR003088 db_xref InterPro:IPR004678 1173706 1175148 gene locus_tag Alide2_1123 1173706 1175148 CDS product cytochrome c oxidase accessory protein CcoG transl_table 11 protein_id gb|AEB83529.1||gnl|jgi|Alide2_1123 note TIGRFAM: Cytochrome c oxidase cbb3 type, accessory protein FixG~KEGG: dia:Dtpsy_1004 cytochrome c oxidase accessory protein CcoG inference protein motif:TFAM:TIGR02745 db_xref InterPro:IPR014116 1175208 1175486 gene locus_tag Alide2_1124 1175208 1175486 CDS product FixH family protein transl_table 11 protein_id gb|AEB83530.1||gnl|jgi|Alide2_1124 note PFAM: FixH~KEGG: dia:Dtpsy_1005 hypothetical protein inference protein motif:PFAM:PF05751 db_xref InterPro:IPR008620 1175574 1175861 gene locus_tag Alide2_1125 1175574 1175861 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83531.1||gnl|jgi|Alide2_1125 note KEGG: dia:Dtpsy_1006 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_1006 1176639 1175896 gene locus_tag Alide2_1126 1176639 1175896 CDS product transcriptional regulator, Crp/Fnr family transl_table 11 protein_id gb|AEB83532.1||gnl|jgi|Alide2_1126 note KEGG: ajs:Ajs_1091 CRP/FNR family transcriptional regulator~PFAM: Cyclic nucleotide-binding domain; HTH transcriptional regulator, Crp~SMART: HTH transcriptional regulator, Crp; Cyclic nucleotide-binding domain inference protein motif:PFAM:PF00027 db_xref GO:0003700 db_xref InterPro:IPR000595 db_xref InterPro:IPR001808 1176810 1178192 gene locus_tag Alide2_1127 1176810 1178192 CDS product oxygen-independent coproporphyrinogen III oxidase transl_table 11 protein_id gb|AEB83533.1||gnl|jgi|Alide2_1127 note TIGRFAM: Oxygen-independent coproporphyrinogen III oxidase HemN~PFAM: HemN, C-terminal; Radical SAM~KEGG: dia:Dtpsy_1008 coproporphyrinogen III oxidase~SMART: Elongator protein 3/MiaB/NifB inference protein motif:TFAM:TIGR00538 db_xref GO:0004109 db_xref InterPro:IPR004558 db_xref InterPro:IPR006638 db_xref InterPro:IPR007197 db_xref InterPro:IPR010723 1178196 1178918 gene locus_tag Alide2_1128 1178196 1178918 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83534.1||gnl|jgi|Alide2_1128 note KEGG: ajs:Ajs_1093 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1093 1179079 1180326 gene locus_tag Alide2_1129 1179079 1180326 CDS product metal dependent phosphohydrolase transl_table 11 protein_id gb|AEB83535.1||gnl|jgi|Alide2_1129 note TIGRFAM: Uncharacterised protein family HDIG~PFAM: Metal-dependent phosphohydrolase, HD subdomain~KEGG: aav:Aave_1533 metal dependent phosphohydrolase~SMART: Metal-dependent phosphohydrolase, HD domain inference protein motif:TFAM:TIGR00277 db_xref InterPro:IPR003607 db_xref InterPro:IPR006674 db_xref InterPro:IPR006675 1180323 1182773 gene locus_tag Alide2_1130 1180323 1182773 CDS product diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) transl_table 11 protein_id gb|AEB83536.1||gnl|jgi|Alide2_1130 note TIGRFAM: Diguanylate cyclase, predicted; PAS~PFAM: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS fold~KEGG: dac:Daci_2786 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase~SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS inference protein motif:TFAM:TIGR00254 db_xref GO:0004871 db_xref InterPro:IPR000014 db_xref InterPro:IPR000160 db_xref InterPro:IPR001633 db_xref InterPro:IPR013767 1182979 1182800 gene locus_tag Alide2_R0013 1182979 1182800 misc_RNA product 6s_RNA note 6S / SsrS RNA as predicted by Rfam (RF00013), score 44.37 1183384 1183028 gene locus_tag Alide2_1131 1183384 1183028 CDS product protein of unknown function DUF710 transl_table 11 protein_id gb|AEB83537.1||gnl|jgi|Alide2_1131 note PFAM: Cell division protein ZapA-like~KEGG: dia:Dtpsy_1010 protein of unknown function DUF710 inference protein motif:PFAM:PF05164 db_xref InterPro:IPR007838 1183620 1183381 gene locus_tag Alide2_1132 1183620 1183381 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83538.1||gnl|jgi|Alide2_1132 note KEGG: ajs:Ajs_1095 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1095 1183655 1183899 misc_binding note Cobalamin riboswitch as predicted by Rfam (RF00174), score 58.15 bound_moiety adenosylcobalamin 1184048 1185841 gene locus_tag Alide2_1133 1184048 1185841 CDS product TonB-dependent receptor plug transl_table 11 protein_id gb|AEB83539.1||gnl|jgi|Alide2_1133 note PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel~KEGG: aav:Aave_1537 TonB-dependent receptor inference protein motif:PFAM:PF07715 db_xref GO:0004872 db_xref GO:0005215 db_xref InterPro:IPR000531 db_xref InterPro:IPR012910 1186013 1187365 gene locus_tag Alide2_1134 1186013 1187365 CDS product CobB/CobQ domain protein glutamine amidotransferase transl_table 11 protein_id gb|AEB83540.1||gnl|jgi|Alide2_1134 note PFAM: CobB/CobQ-like glutamine amidotransferase; Cobyrinic acid a,c-diamide synthase~KEGG: dia:Dtpsy_1013 CobB/CobQ domain protein glutamine amidotransferase inference protein motif:PFAM:PF07685 db_xref GO:0003824 db_xref InterPro:IPR002586 db_xref InterPro:IPR011698 1187362 1187946 gene locus_tag Alide2_1135 1187362 1187946 CDS product Adenosylcobinamide-phosphate guanylyltransferase EC_number 2.7.7.62 transl_table 11 protein_id gb|AEB83541.1||gnl|jgi|Alide2_1135 note KEGG: dia:Dtpsy_1014 cobalbumin biosynthesis protein~PFAM: Cobinamide kinase/cobinamide phosphate guanyltransferase inference protein motif:PRIAM:2.7.7.62 db_xref InterPro:IPR003203 1187943 1188842 gene locus_tag Alide2_1136 1187943 1188842 CDS product ABC-type transporter, periplasmic subunit transl_table 11 protein_id gb|AEB83542.1||gnl|jgi|Alide2_1136 note PFAM: Periplasmic binding protein~KEGG: dia:Dtpsy_1015 periplasmic binding protein inference protein motif:PFAM:PF01497 db_xref GO:0005381 db_xref InterPro:IPR002491 1188839 1189882 gene locus_tag Alide2_1137 1188839 1189882 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB83543.1||gnl|jgi|Alide2_1137 note PFAM: ABC transporter permease protein~KEGG: dia:Dtpsy_1016 transport system permease protein inference protein motif:PFAM:PF01032 db_xref GO:0005215 db_xref InterPro:IPR000522 1189879 1190655 gene locus_tag Alide2_1138 1189879 1190655 CDS product ABC transporter related protein transl_table 11 protein_id gb|AEB83544.1||gnl|jgi|Alide2_1138 note manually curated~PFAM: ABC transporter-like~KEGG: dia:Dtpsy_1017 ABC transporter related~SMART: ATPase, AAA+ type, core inference protein motif:PFAM:PF00005 db_xref GO:0005524 db_xref GO:0016887 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 1190679 1191248 gene locus_tag Alide2_1139 1190679 1191248 CDS product cob(I)alamin adenosyltransferase EC_number 2.5.1.17 transl_table 11 protein_id gb|AEB83545.1||gnl|jgi|Alide2_1139 note TIGRFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR~KEGG: ctt:CtCNB1_1848 cob(I)alamin adenosyltransferase~PFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR inference protein motif:TFAM:TIGR00708 db_xref GO:0005524 db_xref GO:0008817 db_xref InterPro:IPR003724 1191355 1191867 gene locus_tag Alide2_1140 1191355 1191867 CDS product methylated-DNA/protein-cysteine methyltransferase transl_table 11 protein_id gb|AEB83546.1||gnl|jgi|Alide2_1140 note KEGG: dia:Dtpsy_1019 methylated-DNA/protein-cysteine methyltransferase~TIGRFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding~PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; Methylguanine DNA methyltransferase, ribonuclease-like inference protein motif:TFAM:TIGR00589 db_xref GO:0003824 db_xref InterPro:IPR008332 db_xref InterPro:IPR014048 1192559 1191864 gene locus_tag Alide2_1141 1192559 1191864 CDS product Methyltransferase type 11 transl_table 11 protein_id gb|AEB83547.1||gnl|jgi|Alide2_1141 note PFAM: Methyltransferase type 11~KEGG: ajs:Ajs_2354 methyltransferase type 11 inference protein motif:PFAM:PF08241 db_xref GO:0008168 db_xref InterPro:IPR013216 1193690 1192620 gene locus_tag Alide2_1142 1193690 1192620 CDS product NADPH dehydrogenase EC_number 1.6.99.1 transl_table 11 protein_id gb|AEB83548.1||gnl|jgi|Alide2_1142 note KEGG: gbm:Gbem_2134 NADPH-dependent enal/enone/nitroreductase~PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal inference protein motif:PRIAM:1.6.99.1 db_xref InterPro:IPR001155 1194728 1193763 gene locus_tag Alide2_1143 1194728 1193763 CDS product extra-cytoplasmic solute receptor transl_table 11 protein_id gb|AEB83549.1||gnl|jgi|Alide2_1143 note KEGG: reh:H16_B0202 extra-cytoplasmic solute receptor inference similar to AA sequence:KEGG:H16_B0202 db_xref InterPro:IPR005064 1194959 1196146 gene locus_tag Alide2_1144 1194959 1196146 CDS product Formyl-CoA transferase EC_number 2.8.3.16 transl_table 11 protein_id gb|AEB83550.1||gnl|jgi|Alide2_1144 note KEGG: pde:Pden_3227 L-carnitine dehydratase/bile acid-inducible protein F~PFAM: CoA-transferase family III inference protein motif:PRIAM:2.8.3.16 db_xref InterPro:IPR003673 1196158 1196910 gene locus_tag Alide2_1145 1196158 1196910 CDS product 3-oxoacyl-(acyl-carrier-protein) reductase EC_number 1.1.1.100 transl_table 11 protein_id gb|AEB83551.1||gnl|jgi|Alide2_1145 note KEGG: ara:Arad_7507 3-oxoacyl-(acyl-carrier-protein) reductase protein~PFAM: Short-chain dehydrogenase/reductase SDR inference protein motif:PRIAM:1.1.1.100 db_xref InterPro:IPR002198 1197702 1196941 gene locus_tag Alide2_1146 1197702 1196941 CDS product 3-oxoacyl-(acyl-carrier-protein) reductase EC_number 1.1.1.100 transl_table 11 protein_id gb|AEB83552.1||gnl|jgi|Alide2_1146 note KEGG: axy:AXYL_06414 3-oxoacyl-[acyl-carrier-protein] reductase 10~PFAM: Short-chain dehydrogenase/reductase SDR inference protein motif:PRIAM:1.1.1.100 db_xref InterPro:IPR002198 1198980 1197736 gene locus_tag Alide2_1147 1198980 1197736 CDS product Formyl-CoA transferase EC_number 2.8.3.16 transl_table 11 protein_id gb|AEB83553.1||gnl|jgi|Alide2_1147 note KEGG: pag:PLES_04421 putative acyl-CoA transferase~PFAM: CoA-transferase family III inference protein motif:PRIAM:2.8.3.16 db_xref InterPro:IPR003673 1199821 1199012 gene locus_tag Alide2_1148 1199821 1199012 CDS product 3-hydroxybutyrate dehydrogenase EC_number 1.1.1.30 transl_table 11 protein_id gb|AEB83554.1||gnl|jgi|Alide2_1148 note KEGG: azl:AZL_d00150 3-hydroxybutyrate dehydrogenase~PFAM: Short-chain dehydrogenase/reductase SDR inference protein motif:PRIAM:1.1.1.30 db_xref InterPro:IPR002198 1200822 1199827 gene locus_tag Alide2_1149 1200822 1199827 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83555.1||gnl|jgi|Alide2_1149 note KEGG: reu:Reut_B3884 hypothetical protein inference similar to AA sequence:KEGG:Reut_B3884 db_xref InterPro:IPR005064 1201493 1200924 gene locus_tag Alide2_1150 1201493 1200924 CDS product gamma-BHC dehydrochlorinase transl_table 11 protein_id gb|AEB83556.1||gnl|jgi|Alide2_1150 note KEGG: vap:Vapar_5494 gamma-BHC dehydrochlorinase inference similar to AA sequence:KEGG:Vapar_5494 1201566 1202375 gene locus_tag Alide2_1151 1201566 1202375 CDS product Enoyl-CoA hydratase/isomerase transl_table 11 protein_id gb|AEB83557.1||gnl|jgi|Alide2_1151 note PFAM: Crotonase, core~KEGG: swi:Swit_0321 1,4-dihydroxy-2-naphthoate synthase inference protein motif:PFAM:PF00378 db_xref GO:0003824 db_xref InterPro:IPR001753 1202384 1203550 gene locus_tag Alide2_1152 1202384 1203550 CDS product acyl-CoA dehydrogenase domain-containing protein transl_table 11 protein_id gb|AEB83558.1||gnl|jgi|Alide2_1152 note PFAM: Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA oxidase/dehydrogenase, type 1~KEGG: vap:Vapar_1314 acyl-CoA dehydrogenase domain protein inference protein motif:PFAM:PF02771 db_xref GO:0003995 db_xref InterPro:IPR006090 db_xref InterPro:IPR006091 db_xref InterPro:IPR006092 1203559 1204704 gene locus_tag Alide2_1153 1203559 1204704 CDS product acyl-CoA dehydrogenase domain-containing protein transl_table 11 protein_id gb|AEB83559.1||gnl|jgi|Alide2_1153 note PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal~KEGG: pol:Bpro_5276 acyl-CoA dehydrogenase-like inference protein motif:PFAM:PF00441 db_xref GO:0003995 db_xref InterPro:IPR006090 db_xref InterPro:IPR006092 1204742 1205599 gene locus_tag Alide2_1154 1204742 1205599 CDS product transcriptional regulator, IclR family transl_table 11 protein_id gb|AEB83560.1||gnl|jgi|Alide2_1154 note KEGG: gct:GC56T3_1469 transcriptional regulator, IclR family~PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal~SMART: Transcription regulator IclR, N-terminal inference protein motif:PFAM:PF01614 db_xref GO:0003677 db_xref InterPro:IPR005471 db_xref InterPro:IPR014757 1206005 1205694 gene locus_tag Alide2_1155 pseudo 1206412 1206017 gene locus_tag Alide2_1156 pseudo 1208779 1206671 gene locus_tag Alide2_1157 1208779 1206671 CDS product 3-hydroxybutyryl-CoA epimerase EC_number 5.1.2.3 transl_table 11 protein_id gb|AEB83561.1||gnl|jgi|Alide2_1157 note KEGG: rme:Rmet_5110 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase~PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; Crotonase, core inference protein motif:PRIAM:5.1.2.3 db_xref InterPro:IPR001753 db_xref InterPro:IPR006108 db_xref InterPro:IPR006176 1208869 1209642 gene locus_tag Alide2_1158 1208869 1209642 CDS product Enoyl-CoA hydratase/isomerase transl_table 11 protein_id gb|AEB83562.1||gnl|jgi|Alide2_1158 note PFAM: Crotonase, core~KEGG: swi:Swit_0344 enoyl-CoA hydratase inference protein motif:PFAM:PF00378 db_xref GO:0003824 db_xref InterPro:IPR001753 1210852 1209695 gene locus_tag Alide2_1159 1210852 1209695 CDS product thiolase, C-terminal domain-containing protein 10 transl_table 11 protein_id gb|AEB83563.1||gnl|jgi|Alide2_1159 note KEGG: axy:AXYL_06648 thiolase, C-terminal domain-containing protein 10 inference similar to AA sequence:KEGG:AXYL_06648 1211253 1210849 gene locus_tag Alide2_1160 1211253 1210849 CDS product protein of unknown function DUF35 transl_table 11 protein_id gb|AEB83564.1||gnl|jgi|Alide2_1160 note PFAM: Domain of unknown function DUF35, OB-fold, C-terminal~KEGG: rpc:RPC_1073 hypothetical protein inference protein motif:PFAM:PF01796 db_xref InterPro:IPR002878 1213403 1211250 gene locus_tag Alide2_1161 1213403 1211250 CDS product CoA-binding domain protein transl_table 11 protein_id gb|AEB83565.1||gnl|jgi|Alide2_1161 note KEGG: reu:Reut_B4556 CoA-binding~PFAM: CoA-binding~SMART: CoA-binding inference protein motif:PFAM:PF02629 db_xref InterPro:IPR003781 1213574 1214740 gene locus_tag Alide2_1162 1213574 1214740 CDS product Butyryl-CoA dehydrogenase EC_number 1.3.8.1 transl_table 11 protein_id gb|AEB83566.1||gnl|jgi|Alide2_1162 note KEGG: fal:FRAAL3384 putative acyl-CoA dehydrogenase~PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal inference protein motif:PRIAM:1.3.99.2 db_xref InterPro:IPR006090 db_xref InterPro:IPR006091 db_xref InterPro:IPR006092 1214757 1215533 gene locus_tag Alide2_1163 1214757 1215533 CDS product Enoyl-CoA hydratase/isomerase transl_table 11 protein_id gb|AEB83567.1||gnl|jgi|Alide2_1163 note PFAM: Crotonase, core~KEGG: bxe:Bxe_C0267 short chain enoyl-CoA hydratase inference protein motif:PFAM:PF00378 db_xref GO:0003824 db_xref InterPro:IPR001753 1215536 1216666 gene locus_tag Alide2_1164 1215536 1216666 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83568.1||gnl|jgi|Alide2_1164 note KEGG: vei:Veis_4266 hypothetical protein inference similar to AA sequence:KEGG:Veis_4266 1216668 1217069 gene locus_tag Alide2_1165 1216668 1217069 CDS product protein of unknown function DUF35 transl_table 11 protein_id gb|AEB83569.1||gnl|jgi|Alide2_1165 note PFAM: Domain of unknown function DUF35, OB-fold, C-terminal; Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal~KEGG: bbr:BB4332 hypothetical protein inference protein motif:PFAM:PF01796 db_xref InterPro:IPR002878 db_xref InterPro:IPR022002 1217084 1218268 gene locus_tag Alide2_1166 1217084 1218268 CDS product acetyl-CoA acetyltransferase EC_number 2.3.1.16 transl_table 11 protein_id gb|AEB83570.1||gnl|jgi|Alide2_1166 note TIGRFAM: Thiolase~KEGG: vap:Vapar_0843 acetyl-CoA acetyltransferase~PFAM: Thiolase, C-terminal; Thiolase, N-terminal inference protein motif:TFAM:TIGR01930 db_xref GO:0004871 db_xref InterPro:IPR002155 db_xref InterPro:IPR020616 db_xref InterPro:IPR020617 1218285 1219262 gene locus_tag Alide2_1167 1218285 1219262 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83571.1||gnl|jgi|Alide2_1167 note KEGG: vap:Vapar_1676 hypothetical protein inference similar to AA sequence:KEGG:Vapar_1676 db_xref InterPro:IPR005064 1219309 1220058 gene locus_tag Alide2_1168 1219309 1220058 CDS product Electron transfer flavoprotein alpha/beta-subunit transl_table 11 protein_id gb|AEB83572.1||gnl|jgi|Alide2_1168 note KEGG: dia:Dtpsy_2299 electron transfer flavoprotein alpha/beta-subunit~PFAM: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal~SMART: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal inference protein motif:PFAM:PF01012 db_xref InterPro:IPR014730 1220073 1221005 gene locus_tag Alide2_1169 1220073 1221005 CDS product Electron transfer flavoprotein alpha subunit transl_table 11 protein_id gb|AEB83573.1||gnl|jgi|Alide2_1169 note KEGG: rpi:Rpic_2640 electron transfer flavoprotein alpha subunit~PFAM: Electron transfer flavoprotein, alpha subunit, C-terminal; Electron transfer flavoprotein, alpha/beta-subunit, N-terminal~SMART: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal inference protein motif:PFAM:PF00766 db_xref InterPro:IPR014730 db_xref InterPro:IPR014731 1222428 1221313 gene locus_tag Alide2_1170 1222428 1221313 CDS product acyl-CoA dehydrogenase domain-containing protein transl_table 11 protein_id gb|AEB83574.1||gnl|jgi|Alide2_1170 note PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal~KEGG: reh:H16_B0372 pimeloyl-CoA dehydrogenase (small subunit) inference protein motif:PFAM:PF00441 db_xref GO:0003995 db_xref InterPro:IPR006090 db_xref InterPro:IPR006092 1223585 1222437 gene locus_tag Alide2_1171 1223585 1222437 CDS product Isovaleryl-CoA dehydrogenase EC_number 1.3.99.10 transl_table 11 protein_id gb|AEB83575.1||gnl|jgi|Alide2_1171 note KEGG: rme:Rmet_5530 acyl-CoA dehydrogenase~PFAM: Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA oxidase/dehydrogenase, type 1 inference protein motif:PRIAM:1.3.99.10 db_xref InterPro:IPR006090 db_xref InterPro:IPR006091 db_xref InterPro:IPR006092 1223800 1224756 gene locus_tag Alide2_1172 1223800 1224756 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83576.1||gnl|jgi|Alide2_1172 note KEGG: vap:Vapar_5507 hypothetical protein inference similar to AA sequence:KEGG:Vapar_5507 db_xref InterPro:IPR005064 1225306 1225217 gene locus_tag Alide2_R0014 note tRNA-Ser5 1225306 1225217 tRNA product tRNA-Ser 1225884 1225513 gene locus_tag Alide2_1173 1225884 1225513 CDS product protein of unknown function DUF498 transl_table 11 protein_id gb|AEB83577.1||gnl|jgi|Alide2_1173 note PFAM: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3~KEGG: dia:Dtpsy_2561 protein of unknown function DUF498 inference protein motif:PFAM:PF04430 db_xref InterPro:IPR007523 1226003 1227235 gene locus_tag Alide2_1174 1226003 1227235 CDS product Aspartate transaminase EC_number 2.6.1.1 transl_table 11 protein_id gb|AEB83578.1||gnl|jgi|Alide2_1174 note KEGG: dia:Dtpsy_2560 aminotransferase AlaT~PFAM: Aminotransferase, class I/classII inference protein motif:PRIAM:2.6.1.1 db_xref InterPro:IPR004839 1227307 1228641 gene locus_tag Alide2_1175 1227307 1228641 CDS product Homoserine dehydrogenase EC_number 1.1.1.3 transl_table 11 protein_id gb|AEB83579.1||gnl|jgi|Alide2_1175 note KEGG: ajs:Ajs_3206 homoserine dehydrogenase~PFAM: Homoserine dehydrogenase, catalytic; Aspartate/homoserine dehydrogenase, NAD-binding; Amino acid-binding ACT inference protein motif:PRIAM:1.1.1.3 db_xref InterPro:IPR001342 db_xref InterPro:IPR002912 db_xref InterPro:IPR005106 1228685 1228948 gene locus_tag Alide2_1176 1228685 1228948 CDS product prevent-host-death family protein transl_table 11 protein_id gb|AEB83580.1||gnl|jgi|Alide2_1176 note KEGG: bts:Btus_3191 prevent-host-death family protein~TIGRFAM: Prevent-host-death protein~PFAM: Prevent-host-death protein inference protein motif:TFAM:TIGR01552 db_xref InterPro:IPR006442 1228954 1229382 gene locus_tag Alide2_1177 1228954 1229382 CDS product PilT protein domain protein transl_table 11 protein_id gb|AEB83581.1||gnl|jgi|Alide2_1177 note PFAM: PilT protein, N-terminal~KEGG: geo:Geob_1146 PilT protein domain protein inference protein motif:PFAM:PF01850 db_xref InterPro:IPR002716 1229393 1230823 gene locus_tag Alide2_1178 1229393 1230823 CDS product threonine synthase EC_number 4.2.3.1 transl_table 11 protein_id gb|AEB83582.1||gnl|jgi|Alide2_1178 note TIGRFAM: Threonine synthase~KEGG: dia:Dtpsy_2558 threonine synthase~PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit inference protein motif:TFAM:TIGR00260 db_xref GO:0004795 db_xref InterPro:IPR001926 db_xref InterPro:IPR004450 1230897 1231448 gene locus_tag Alide2_1179 1230897 1231448 CDS product molybdopterin-guanine dinucleotide biosynthesis protein B transl_table 11 protein_id gb|AEB83583.1||gnl|jgi|Alide2_1179 note TIGRFAM: Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB), conserved domain~KEGG: dia:Dtpsy_2557 molybdopterin-guanine dinucleotide biosynthesis protein B inference protein motif:TFAM:TIGR00176 db_xref GO:0005525 db_xref InterPro:IPR004435 1231445 1232692 gene locus_tag Alide2_1180 1231445 1232692 CDS product molybdenum cofactor synthesis domain protein transl_table 11 protein_id gb|AEB83584.1||gnl|jgi|Alide2_1180 note TIGRFAM: Molybdenum cofactor synthesis~PFAM: MoeA, N-terminal and linker domain; MoeA, C-terminal, domain IV; Molybdopterin binding~KEGG: ajs:Ajs_3203 molybdenum cofactor synthesis domain-containing protein~SMART: Molybdopterin binding inference protein motif:TFAM:TIGR00177 db_xref InterPro:IPR001453 db_xref InterPro:IPR005110 db_xref InterPro:IPR005111 db_xref InterPro:IPR020817 1232689 1232949 gene locus_tag Alide2_1181 1232689 1232949 CDS product molybdopterin converting factor, subunit 1 transl_table 11 protein_id gb|AEB83585.1||gnl|jgi|Alide2_1181 note KEGG: dia:Dtpsy_2555 molybdopterin converting factor, subunit 1~TIGRFAM: Molybdopterin converting factor, subunit 1~PFAM: ThiamineS inference protein motif:TFAM:TIGR01682 db_xref InterPro:IPR003749 db_xref InterPro:IPR010034 1233838 1232936 gene locus_tag Alide2_1182 1233838 1232936 CDS product dihydrodipicolinate synthase EC_number 4.2.1.52 transl_table 11 protein_id gb|AEB83586.1||gnl|jgi|Alide2_1182 note TIGRFAM: Dihydrodipicolinate synthase subfamily~KEGG: dac:Daci_5213 dihydrodipicolinate synthase~PFAM: Dihydrodipicolinate synthetase inference protein motif:TFAM:TIGR00674 db_xref GO:0008840 db_xref InterPro:IPR002220 db_xref InterPro:IPR005263 1234423 1234103 gene locus_tag Alide2_1183 1234423 1234103 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83587.1||gnl|jgi|Alide2_1183 note KEGG: dia:Dtpsy_2554 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_2554 1234640 1234497 gene locus_tag Alide2_1184 1234640 1234497 CDS product Protein of unknown function DUF3149 transl_table 11 protein_id gb|AEB83588.1||gnl|jgi|Alide2_1184 note PFAM: Protein of unknown function DUF3149~KEGG: dia:Dtpsy_2553 hypothetical protein inference protein motif:PFAM:PF11346 db_xref InterPro:IPR021494 1235007 1234753 gene locus_tag Alide2_1185 1235007 1234753 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83589.1||gnl|jgi|Alide2_1185 note KEGG: dia:Dtpsy_2552 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_2552 1235064 1235540 gene locus_tag Alide2_1186 1235064 1235540 CDS product molybdopterin biosynthesis MoaE protein transl_table 11 protein_id gb|AEB83590.1||gnl|jgi|Alide2_1186 note PFAM: Molybdopterin biosynthesis MoaE~KEGG: ajs:Ajs_3199 molybdopterin synthase subunit MoaE inference protein motif:PFAM:PF02391 db_xref InterPro:IPR003448 1235608 1238211 gene locus_tag Alide2_1187 1235608 1238211 CDS product ATP-dependent chaperone ClpB transl_table 11 protein_id gb|AEB83591.1||gnl|jgi|Alide2_1187 note TIGRFAM: Chaperonin ClpB~PFAM: ATPase, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal~KEGG: dia:Dtpsy_2550 ATP-dependent chaperone ClpB~SMART: ATPase, AAA+ type, core inference protein motif:TFAM:TIGR03346 db_xref InterPro:IPR003593 db_xref InterPro:IPR003959 db_xref InterPro:IPR004176 db_xref InterPro:IPR013093 db_xref InterPro:IPR017730 db_xref InterPro:IPR019489 1238227 1238589 gene locus_tag Alide2_1188 1238227 1238589 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83592.1||gnl|jgi|Alide2_1188 note KEGG: dia:Dtpsy_2549 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_2549 1238709 1240169 gene locus_tag Alide2_1189 1238709 1240169 CDS product Coniferyl-aldehyde dehydrogenase EC_number 1.2.1.68 transl_table 11 protein_id gb|AEB83593.1||gnl|jgi|Alide2_1189 note KEGG: dia:Dtpsy_2547 aldehyde dehydrogenase~PFAM: Aldehyde dehydrogenase domain inference protein motif:PRIAM:1.2.1.68 db_xref InterPro:IPR015590 1240246 1240767 gene locus_tag Alide2_1190 1240246 1240767 CDS product GCN5-related N-acetyltransferase transl_table 11 protein_id gb|AEB83594.1||gnl|jgi|Alide2_1190 note KEGG: dia:Dtpsy_2546 GCN5-related N-acetyltransferase~manually curated~PFAM: GCN5-related N-acetyltransferase (GNAT) domain inference protein motif:PFAM:PF00583 db_xref GO:0008080 db_xref InterPro:IPR000182 1240793 1241932 gene locus_tag Alide2_1191 1240793 1241932 CDS product methyltransferase small transl_table 11 protein_id gb|AEB83595.1||gnl|jgi|Alide2_1191 note PFAM: Methyltransferase small~KEGG: aav:Aave_1253 methyltransferase small inference protein motif:PFAM:PF05175 db_xref GO:0008168 db_xref InterPro:IPR007848 1241988 1243007 gene locus_tag Alide2_1192 1241988 1243007 CDS product dihydrouridine synthase DuS transl_table 11 protein_id gb|AEB83596.1||gnl|jgi|Alide2_1192 note PFAM: tRNA-dihydrouridine synthase~KEGG: dia:Dtpsy_2544 dihydrouridine synthase DuS inference protein motif:PFAM:PF01207 db_xref GO:0017150 db_xref GO:0050660 db_xref InterPro:IPR001269 1244577 1242967 gene locus_tag Alide2_1193 1244577 1242967 CDS product phospholipase D/Transphosphatidylase transl_table 11 protein_id gb|AEB83597.1||gnl|jgi|Alide2_1193 note KEGG: dia:Dtpsy_2543 phospholipase D/transphosphatidylase~PFAM: Phospholipase D/Transphosphatidylase~SMART: Phospholipase D/Transphosphatidylase inference protein motif:PFAM:PF00614 db_xref GO:0003824 db_xref InterPro:IPR001736 1245713 1244601 gene locus_tag Alide2_1194 1245713 1244601 CDS product riboflavin biosynthesis protein RibD EC_number 1.1.1.193 EC_number 3.5.4.26 transl_table 11 protein_id gb|AEB83598.1||gnl|jgi|Alide2_1194 note TIGRFAM: Riboflavin biosynthesis protein RibD; Riboflavin-specific deaminase, C-terminal~KEGG: dia:Dtpsy_2542 riboflavin biosynthesis protein RibD~PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; CMP/dCMP deaminase, zinc-binding inference protein motif:TFAM:TIGR00326 db_xref GO:0008703 db_xref GO:0008835 db_xref GO:0050661 db_xref InterPro:IPR002125 db_xref InterPro:IPR002734 db_xref InterPro:IPR004794 db_xref InterPro:IPR011549 1246185 1245751 gene locus_tag Alide2_1195 1246185 1245751 CDS product fimbrial protein pilin transl_table 11 protein_id gb|AEB83599.1||gnl|jgi|Alide2_1195 note KEGG: dia:Dtpsy_2540 fimbrial protein pilin inference similar to AA sequence:KEGG:Dtpsy_2540 db_xref InterPro:IPR012902 1249933 1246196 gene locus_tag Alide2_1196 1249933 1246196 CDS product Neisseria PilC domain protein transl_table 11 protein_id gb|AEB83600.1||gnl|jgi|Alide2_1196 note PFAM: PilC domain~KEGG: dac:Daci_5197 FG-GAP repeat-containing protein inference protein motif:PFAM:PF05567 db_xref InterPro:IPR008707 1250774 1250025 gene locus_tag Alide2_1197 1250774 1250025 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83601.1||gnl|jgi|Alide2_1197 note KEGG: dac:Daci_5196 hypothetical protein inference similar to AA sequence:KEGG:Daci_5196 1251661 1250786 gene locus_tag Alide2_1198 1251661 1250786 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83602.1||gnl|jgi|Alide2_1198 note KEGG: dac:Daci_5195 hypothetical protein inference similar to AA sequence:KEGG:Daci_5195 db_xref InterPro:IPR012902 1252305 1251664 gene locus_tag Alide2_1199 1252305 1251664 CDS product type IV pilus modification protein PilV transl_table 11 protein_id gb|AEB83603.1||gnl|jgi|Alide2_1199 note TIGRFAM: Pilus modification type IV, PilV; Prepilin-type cleavage/methylation, N-terminal~KEGG: dac:Daci_5194 type IV pilus modification protein PilV inference protein motif:TFAM:TIGR02523 db_xref InterPro:IPR012902 db_xref InterPro:IPR013362 1252818 1252312 gene locus_tag Alide2_1200 1252818 1252312 CDS product General secretion pathway, GspH transl_table 11 protein_id gb|AEB83604.1||gnl|jgi|Alide2_1200 note PFAM: General secretion pathway, GspH~KEGG: ajs:Ajs_3182 putative type-4 fimbrial pilin related signal peptide protein inference protein motif:PFAM:PF12019 db_xref GO:0008565 db_xref InterPro:IPR022346 1253027 1254001 gene locus_tag Alide2_1201 1253027 1254001 CDS product cobalamin biosynthesis protein CobD transl_table 11 protein_id gb|AEB83605.1||gnl|jgi|Alide2_1201 note KEGG: ajs:Ajs_3180 adenosylcobinamide-phosphate synthase~TIGRFAM: Cobalamin biosynthesis CobD/CbiB~PFAM: Cobalamin biosynthesis CobD/CbiB inference protein motif:TFAM:TIGR00380 db_xref InterPro:IPR004485 1253994 1254980 gene locus_tag Alide2_1202 1253994 1254980 CDS product aminotransferase class I and II transl_table 11 protein_id gb|AEB83606.1||gnl|jgi|Alide2_1202 note KEGG: dia:Dtpsy_2532 aminotransferase class I and II inference similar to AA sequence:KEGG:Dtpsy_2532 1254977 1256449 gene locus_tag Alide2_1203 1254977 1256449 CDS product Cobyric acid synthase transl_table 11 protein_id gb|AEB83607.1||gnl|jgi|Alide2_1203 note TIGRFAM: Cobyric acid synthase CobQ~HAMAP: Cobyric acid synthase CobQ~KEGG: ajs:Ajs_3178 adenosylcobyric acid synthase (glutamine-hydrolysing)~PFAM: CobB/CobQ-like glutamine amidotransferase; Cobyrinic acid a,c-diamide synthase inference protein motif:HAMAP:MF_00028 db_xref InterPro:IPR002586 db_xref InterPro:IPR004459 db_xref InterPro:IPR011698 1256508 1257566 gene locus_tag Alide2_1204 1256508 1257566 CDS product nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase EC_number 2.4.2.21 transl_table 11 protein_id gb|AEB83608.1||gnl|jgi|Alide2_1204 note TIGRFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic~KEGG: ajs:Ajs_3176 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase~PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like inference protein motif:TFAM:TIGR03160 db_xref GO:0008939 db_xref InterPro:IPR003200 db_xref InterPro:IPR017846 1257656 1258159 gene locus_tag Alide2_1205 1257656 1258159 CDS product Appr-1-p processing domain protein transl_table 11 protein_id gb|AEB83609.1||gnl|jgi|Alide2_1205 note PFAM: Appr-1-p processing~KEGG: pag:PLES_35831 hypothetical protein inference protein motif:PFAM:PF01661 db_xref InterPro:IPR002589 1258815 1258177 gene locus_tag Alide2_1206 1258815 1258177 CDS product endonuclease III EC_number 4.2.99.18 transl_table 11 protein_id gb|AEB83610.1||gnl|jgi|Alide2_1206 note SMART: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif; Helix-hairpin-helix DNA-binding motif, class 1~TIGRFAM: Endonuclease III/Nth~KEGG: ajs:Ajs_3170 endonuclease III / DNA-(apurinic or apyrimidinic site) lyase~PFAM: HhH-GPD domain; Helix-hairpin-helix motif; Endonuclease III-like, iron-sulphur cluster loop motif inference protein motif:TFAM:TIGR01083 db_xref GO:0003906 db_xref InterPro:IPR000445 db_xref InterPro:IPR003265 db_xref InterPro:IPR003583 db_xref InterPro:IPR003651 db_xref InterPro:IPR005759 1259765 1258812 gene locus_tag Alide2_1207 1259765 1258812 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB83611.1||gnl|jgi|Alide2_1207 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: dac:Daci_2826 LysR family transcriptional regulator inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 1259876 1261339 gene locus_tag Alide2_1208 1259876 1261339 CDS product Amidase transl_table 11 protein_id gb|AEB83612.1||gnl|jgi|Alide2_1208 note PFAM: Amidase~KEGG: dac:Daci_2827 amidase inference protein motif:PFAM:PF01425 db_xref GO:0003906 db_xref InterPro:IPR000120 1261375 1262361 gene locus_tag Alide2_1209 1261375 1262361 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83613.1||gnl|jgi|Alide2_1209 note KEGG: dac:Daci_2828 hypothetical protein inference similar to AA sequence:KEGG:Daci_2828 db_xref InterPro:IPR005064 1262828 1262358 gene locus_tag Alide2_1210 1262828 1262358 CDS product transcription activator effector binding protein transl_table 11 protein_id gb|AEB83614.1||gnl|jgi|Alide2_1210 note KEGG: dac:Daci_3099 AraC family transcriptional regulator~PFAM: Bacterial transcription activator, effector binding~SMART: Bacterial transcription activator, effector binding inference protein motif:PFAM:PF06445 db_xref InterPro:IPR010499 1262981 1264174 gene locus_tag Alide2_1211 1262981 1264174 CDS product putative transcriptional regulator, GntR family EC_number 2.6.1.57 transl_table 11 protein_id gb|AEB83615.1||gnl|jgi|Alide2_1211 note KEGG: aav:Aave_1563 GntR family transcriptional regulator~PFAM: Aminotransferase, class I/classII inference protein motif:PRIAM:2.6.1.57 db_xref InterPro:IPR004839 1264176 1264376 gene locus_tag Alide2_1212 1264176 1264376 CDS product SlyX family protein transl_table 11 protein_id gb|AEB83616.1||gnl|jgi|Alide2_1212 note PFAM: SlyX~KEGG: dia:Dtpsy_2515 SlyX family protein inference protein motif:PFAM:PF04102 db_xref InterPro:IPR007236 1264454 1265455 gene locus_tag Alide2_1213 1264454 1265455 CDS product NADP-dependent oxidoreductase domain protein transl_table 11 protein_id gb|AEB83617.1||gnl|jgi|Alide2_1213 note PFAM: NADP-dependent oxidoreductase domain~KEGG: ajs:Ajs_3167 aldo/keto reductase inference protein motif:PFAM:PF00248 db_xref InterPro:IPR023210 1265458 1265898 gene locus_tag Alide2_1214 1265458 1265898 CDS product copper resistance D domain protein transl_table 11 protein_id gb|AEB83618.1||gnl|jgi|Alide2_1214 note PFAM: Copper resistance D~KEGG: ajs:Ajs_3166 hypothetical protein inference protein motif:PFAM:PF05425 db_xref InterPro:IPR008457 1265898 1266122 gene locus_tag Alide2_1215 1265898 1266122 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83619.1||gnl|jgi|Alide2_1215 note KEGG: dia:Dtpsy_2512 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_2512 1266490 1266119 gene locus_tag Alide2_1216 1266490 1266119 CDS product globin-like protein transl_table 11 protein_id gb|AEB83620.1||gnl|jgi|Alide2_1216 note KEGG: aav:Aave_1570 globin-like protein inference similar to AA sequence:KEGG:Aave_1570 1267224 1266493 gene locus_tag Alide2_1217 1267224 1266493 CDS product iron-sulfur cluster repair di-iron protein transl_table 11 protein_id gb|AEB83621.1||gnl|jgi|Alide2_1217 note KEGG: dia:Dtpsy_2511 hemerythrin HHE cation binding domain protein~TIGRFAM: Iron-sulfur cluster repair di-iron protein~PFAM: Domain of unknown function DUF542, ScdA N-terminal; Haemerythrin/HHE cation-binding motif inference protein motif:TFAM:TIGR03652 db_xref InterPro:IPR007500 db_xref InterPro:IPR012312 db_xref InterPro:IPR019903 1267310 1267801 gene locus_tag Alide2_1218 1267310 1267801 CDS product transcriptional regulator, BadM/Rrf2 family transl_table 11 protein_id gb|AEB83622.1||gnl|jgi|Alide2_1218 note KEGG: dia:Dtpsy_2510 transcriptional regulator, BadM/Rrf2 family~TIGRFAM: Transcription regulator Rrf2~PFAM: Transcription regulator Rrf2 inference protein motif:TFAM:TIGR00738 db_xref InterPro:IPR000944 1268102 1270024 gene locus_tag Alide2_1219 1268102 1270024 CDS product putative serine protein kinase, PrkA transl_table 11 protein_id gb|AEB83623.1||gnl|jgi|Alide2_1219 note KEGG: ctt:CtCNB1_1949 putative serine protein kinase, PrkA~PFAM: PrkA AAA; PrkA serine kinase~SMART: PrkA AAA inference protein motif:PFAM:PF08298 db_xref InterPro:IPR010650 db_xref InterPro:IPR013153 1270069 1271337 gene locus_tag Alide2_1220 1270069 1271337 CDS product UPF0229 protein yeaH transl_table 11 protein_id gb|AEB83624.1||gnl|jgi|Alide2_1220 note KEGG: dac:Daci_2328 hypothetical protein~HAMAP: Uncharacterised protein family UPF0229~PFAM: Uncharacterised protein family UPF0229 inference protein motif:HAMAP:MF_01232 db_xref InterPro:IPR006698 1271334 1272965 gene locus_tag Alide2_1221 1271334 1272965 CDS product SpoVR family protein transl_table 11 protein_id gb|AEB83625.1||gnl|jgi|Alide2_1221 note PFAM: Sporulation stage V, protein R~KEGG: dac:Daci_2329 SpoVR family protein inference protein motif:PFAM:PF04293 db_xref InterPro:IPR007390 1273877 1273092 gene locus_tag Alide2_1222 1273877 1273092 CDS product lipoprotein, YaeC family transl_table 11 protein_id gb|AEB83626.1||gnl|jgi|Alide2_1222 note KEGG: dia:Dtpsy_2507 lipoprotein, YaeC family~TIGRFAM: Lipoprotein YaeC~PFAM: NLPA lipoprotein inference protein motif:TFAM:TIGR00363 db_xref InterPro:IPR004478 db_xref InterPro:IPR004872 1275078 1274014 gene locus_tag Alide2_1223 1275078 1274014 CDS product integral membrane sensor signal transduction histidine kinase transl_table 11 protein_id gb|AEB83627.1||gnl|jgi|Alide2_1223 note KEGG: ajs:Ajs_3313 histidine kinase internal region~PFAM: Signal transduction histidine kinase, internal region~SMART: ATPase-like, ATP-binding domain inference protein motif:PFAM:PF06580 db_xref GO:0000155 db_xref InterPro:IPR003594 db_xref InterPro:IPR010559 1275129 1276589 gene locus_tag Alide2_1224 1275129 1276589 CDS product argininosuccinate lyase EC_number 4.3.2.1 transl_table 11 protein_id gb|AEB83628.1||gnl|jgi|Alide2_1224 note TIGRFAM: Argininosuccinate lyase~KEGG: dia:Dtpsy_2664 argininosuccinate lyase~PFAM: Lyase 1, N-terminal inference protein motif:TFAM:TIGR00838 db_xref GO:0004056 db_xref InterPro:IPR009049 db_xref InterPro:IPR022761 1276607 1277581 gene locus_tag Alide2_1225 1276607 1277581 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83629.1||gnl|jgi|Alide2_1225 note KEGG: ajs:Ajs_3311 hypothetical protein inference similar to AA sequence:KEGG:Ajs_3311 db_xref InterPro:IPR005064 db_xref InterPro:IPR006311 1277713 1283649 gene locus_tag Alide2_1226 1277713 1283649 CDS product alpha-2-macroglobulin domain protein transl_table 11 protein_id gb|AEB83630.1||gnl|jgi|Alide2_1226 note PFAM: Alpha-2-macroglobulin, N-terminal; Alpha-2-macroglobulin, N-terminal 2; Alpha-2-macroglobulin~KEGG: dia:Dtpsy_2661 alpha-2-macroglobulin domain protein inference protein motif:PFAM:PF01835 db_xref GO:0004866 db_xref InterPro:IPR001599 db_xref InterPro:IPR002890 db_xref InterPro:IPR011625 1283684 1284766 gene locus_tag Alide2_1227 1283684 1284766 CDS product metallophosphoesterase transl_table 11 protein_id gb|AEB83631.1||gnl|jgi|Alide2_1227 note PFAM: Metallo-dependent phosphatase~KEGG: dac:Daci_4972 metallophosphoesterase inference protein motif:PFAM:PF00149 db_xref GO:0016787 db_xref InterPro:IPR004843 1285757 1284876 gene locus_tag Alide2_1228 1285757 1284876 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB83632.1||gnl|jgi|Alide2_1228 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: pol:Bpro_2067 LysR family transcriptional regulator inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 1285890 1286882 gene locus_tag Alide2_1229 1285890 1286882 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83633.1||gnl|jgi|Alide2_1229 note KEGG: vap:Vapar_4821 hypothetical protein inference similar to AA sequence:KEGG:Vapar_4821 db_xref InterPro:IPR005064 1286890 1287885 gene locus_tag Alide2_1230 1286890 1287885 CDS product Asparaginase EC_number 3.5.1.1 transl_table 11 protein_id gb|AEB83634.1||gnl|jgi|Alide2_1230 note PFAM: Asparaginase/glutaminase~KEGG: axy:AXYL_04759 L-asparaginase 1~SMART: Asparaginase/glutaminase inference protein motif:PRIAM:3.5.1.1 db_xref InterPro:IPR006034 1287925 1289082 gene locus_tag Alide2_1231 1287925 1289082 CDS product Butyryl-CoA dehydrogenase EC_number 1.3.8.1 transl_table 11 protein_id gb|AEB83635.1||gnl|jgi|Alide2_1231 note KEGG: rme:Rmet_5425 putative butyryl-CoA dehydrogenase~PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal inference protein motif:PRIAM:1.3.99.2 db_xref InterPro:IPR006090 db_xref InterPro:IPR006091 db_xref InterPro:IPR006092 1289082 1291181 gene locus_tag Alide2_1232 1289082 1291181 CDS product CoA-binding domain protein transl_table 11 protein_id gb|AEB83636.1||gnl|jgi|Alide2_1232 note KEGG: dac:Daci_1885 CoA-binding domain-containing protein~PFAM: CoA-binding~SMART: CoA-binding inference protein motif:PFAM:PF02629 db_xref InterPro:IPR003781 1291178 1292827 gene locus_tag Alide2_1233 1291178 1292827 CDS product Isovaleryl-CoA dehydrogenase EC_number 1.3.99.10 transl_table 11 protein_id gb|AEB83637.1||gnl|jgi|Alide2_1233 note KEGG: gpb:HDN1F_16010 acyl-CoA dehydrogenase~PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain inference protein motif:PRIAM:1.3.99.10 db_xref InterPro:IPR006090 db_xref InterPro:IPR006091 db_xref InterPro:IPR006092 1292961 1294208 gene locus_tag Alide2_1234 1292961 1294208 CDS product putative dehydratase/racemase transl_table 11 protein_id gb|AEB83638.1||gnl|jgi|Alide2_1234 note KEGG: bbr:BB0464 putative dehydratase/racemase inference similar to AA sequence:KEGG:BB0464 1294533 1295414 gene locus_tag Alide2_1235 1294533 1295414 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83639.1||gnl|jgi|Alide2_1235 note KEGG: dia:Dtpsy_2653 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_2653 1295414 1297579 gene locus_tag Alide2_1236 1295414 1297579 CDS product penicillin-binding protein 1C EC_number 2.4.1.129 transl_table 11 protein_id gb|AEB83640.1||gnl|jgi|Alide2_1236 note TIGRFAM: Penicillin-binding protein 1C~KEGG: ajs:Ajs_3299 penicillin-binding protein 1C~PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase; Penicillin-binding, C-terminal inference protein motif:TFAM:TIGR02073 db_xref InterPro:IPR001264 db_xref InterPro:IPR001460 db_xref InterPro:IPR009647 db_xref InterPro:IPR011815 1297644 1298165 gene locus_tag Alide2_1237 1297644 1298165 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83641.1||gnl|jgi|Alide2_1237 note KEGG: dac:Daci_3482 hypothetical protein inference similar to AA sequence:KEGG:Daci_3482 1298186 1299418 gene locus_tag Alide2_1238 1298186 1299418 CDS product diguanylate cyclase transl_table 11 protein_id gb|AEB83642.1||gnl|jgi|Alide2_1238 note TIGRFAM: Diguanylate cyclase, predicted~PFAM: Diguanylate cyclase, predicted; HAMP linker domain~KEGG: dac:Daci_3483 diguanylate cyclase~SMART: Diguanylate cyclase, predicted; HAMP linker domain inference protein motif:TFAM:TIGR00254 db_xref InterPro:IPR000160 db_xref InterPro:IPR003660 1299415 1299930 gene locus_tag Alide2_1239 1299415 1299930 CDS product OmpA/MotB domain protein transl_table 11 protein_id gb|AEB83643.1||gnl|jgi|Alide2_1239 note PFAM: Outer membrane protein, OmpA/MotB, C-terminal~KEGG: dac:Daci_3484 OmpA/MotB domain-containing protein inference protein motif:PFAM:PF00691 db_xref InterPro:IPR006665 1300023 1301195 gene locus_tag Alide2_1240 1300023 1301195 CDS product L-lactate dehydrogenase (cytochrome) EC_number 1.1.2.3 transl_table 11 protein_id gb|AEB83644.1||gnl|jgi|Alide2_1240 note KEGG: ajs:Ajs_3298 (S)-2-hydroxy-acid oxidase~PFAM: FMN-dependent dehydrogenase inference protein motif:PRIAM:1.1.2.3 db_xref InterPro:IPR000262 1301368 1302300 gene locus_tag Alide2_1241 1301368 1302300 CDS product protein of unknown function DUF6 transmembrane transl_table 11 protein_id gb|AEB83645.1||gnl|jgi|Alide2_1241 note PFAM: Drug/metabolite transporter~KEGG: dia:Dtpsy_2650 hypothetical protein inference protein motif:PFAM:PF00892 db_xref InterPro:IPR000620 1304151 1302313 gene locus_tag Alide2_1242 1304151 1302313 CDS product Isovaleryl-CoA dehydrogenase EC_number 1.3.99.10 transl_table 11 protein_id gb|AEB83646.1||gnl|jgi|Alide2_1242 note KEGG: bbr:BB0981 acyl-CoA dehydrogenase~PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain inference protein motif:PRIAM:1.3.99.10 db_xref InterPro:IPR006090 db_xref InterPro:IPR006091 1305414 1304188 gene locus_tag Alide2_1243 1305414 1304188 CDS product Formyl-CoA transferase EC_number 2.8.3.16 transl_table 11 protein_id gb|AEB83647.1||gnl|jgi|Alide2_1243 note KEGG: bbr:BB0982 hypothetical protein~PFAM: CoA-transferase family III inference protein motif:PRIAM:2.8.3.16 db_xref InterPro:IPR003673 1306413 1305445 gene locus_tag Alide2_1244 1306413 1305445 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83648.1||gnl|jgi|Alide2_1244 note KEGG: bbr:BB0983 hypothetical protein inference similar to AA sequence:KEGG:BB0983 db_xref InterPro:IPR005064 1306552 1307445 gene locus_tag Alide2_1245 1306552 1307445 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB83649.1||gnl|jgi|Alide2_1245 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: bbr:BB0984 LysR family transcriptional regulator inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 1307521 1308714 gene locus_tag Alide2_1246 1307521 1308714 CDS product DNA-directed DNA polymerase EC_number 2.7.7.7 transl_table 11 protein_id gb|AEB83650.1||gnl|jgi|Alide2_1246 note KEGG: aav:Aave_1964 DNA-directed DNA polymerase~PFAM: DNA-repair protein, UmuC-like inference protein motif:PRIAM:2.7.7.7 db_xref InterPro:IPR001126 1308876 1310438 gene locus_tag Alide2_1247 1308876 1310438 CDS product methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor transl_table 11 protein_id gb|AEB83651.1||gnl|jgi|Alide2_1247 note TIGRFAM: PAS~PFAM: Chemotaxis methyl-accepting receptor, signalling; PAS fold-3~KEGG: dia:Dtpsy_2648 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor~SMART: Chemotaxis methyl-accepting receptor, signalling; PAS; PAC motif inference protein motif:TFAM:TIGR00229 db_xref GO:0004871 db_xref InterPro:IPR000014 db_xref InterPro:IPR001610 db_xref InterPro:IPR004089 db_xref InterPro:IPR013655 1311313 1310468 gene locus_tag Alide2_1248 1311313 1310468 CDS product 7-cyano-7-deazaguanine reductase EC_number 1.7.1.13 transl_table 11 protein_id gb|AEB83652.1||gnl|jgi|Alide2_1248 note TIGRFAM: Nitrile oxidoreductase, NADPH-dependent, YqcD~KEGG: ajs:Ajs_3294 7-cyano-7-deazaguanine reductase~PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase inference protein motif:TFAM:TIGR03138 db_xref GO:0004871 db_xref InterPro:IPR016428 db_xref InterPro:IPR020602 1312223 1311369 gene locus_tag Alide2_1249 1312223 1311369 CDS product Procollagen-proline dioxygenase EC_number 1.14.11.2 transl_table 11 protein_id gb|AEB83653.1||gnl|jgi|Alide2_1249 note PFAM: Oxoglutarate/iron-dependent oxygenase~KEGG: ajs:Ajs_3293 2OG-Fe(II) oxygenase~SMART: Prolyl 4-hydroxylase, alpha subunit inference protein motif:PRIAM:1.14.11.2 db_xref InterPro:IPR005123 db_xref InterPro:IPR006620 1312993 1312220 gene locus_tag Alide2_1250 1312993 1312220 CDS product protein of unknown function DUF328 transl_table 11 protein_id gb|AEB83654.1||gnl|jgi|Alide2_1250 note PFAM: Uncharacterised protein family UPF0246~KEGG: dia:Dtpsy_2644 hypothetical protein inference protein motif:PFAM:PF03883 db_xref InterPro:IPR005583 1316238 1313152 gene locus_tag Alide2_1251 1316238 1313152 CDS product ribonuclease, Rne/Rng family transl_table 11 protein_id gb|AEB83655.1||gnl|jgi|Alide2_1251 note TIGRFAM: Ribonuclease E/G~PFAM: RNA-binding protein AU-1/Ribonuclease E/G; Ribosomal protein S1, RNA-binding domain~KEGG: ajs:Ajs_3290 ribonuclease E~SMART: RNA-binding domain, S1 inference protein motif:TFAM:TIGR00757 db_xref GO:0004540 db_xref InterPro:IPR003029 db_xref InterPro:IPR004659 db_xref InterPro:IPR019307 db_xref InterPro:IPR022967 1316828 1317847 gene locus_tag Alide2_1252 1316828 1317847 CDS product pseudouridine synthase, RluA family transl_table 11 protein_id gb|AEB83656.1||gnl|jgi|Alide2_1252 note TIGRFAM: Pseudouridine synthase, RluC/RluD~PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; Zinc finger, FLYWCH-type~KEGG: dia:Dtpsy_2642 pseudouridine synthase, RluA family~SMART: RNA-binding S4 inference protein motif:TFAM:TIGR00005 db_xref GO:0003723 db_xref GO:0009982 db_xref InterPro:IPR002942 db_xref InterPro:IPR006145 db_xref InterPro:IPR006225 db_xref InterPro:IPR007588 1317840 1318511 gene locus_tag Alide2_1253 1317840 1318511 CDS product HAD-superfamily hydrolase, subfamily IA, variant 3 transl_table 11 protein_id gb|AEB83657.1||gnl|jgi|Alide2_1253 note KEGG: dia:Dtpsy_2641 HAD-superfamily hydrolase, subfamily IA, variant 1~TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1~PFAM: Haloacid dehalogenase-like hydrolase inference protein motif:TFAM:TIGR01509 db_xref GO:0008967 db_xref GO:0016787 db_xref InterPro:IPR005834 db_xref InterPro:IPR006402 db_xref InterPro:IPR006439 1318514 1318885 gene locus_tag Alide2_1254 1318514 1318885 CDS product Rieske (2Fe-2S) iron-sulfur domain protein transl_table 11 protein_id gb|AEB83658.1||gnl|jgi|Alide2_1254 note PFAM: Rieske [2Fe-2S] iron-sulphur domain~KEGG: dia:Dtpsy_2640 Rieske (2Fe-2S) domain protein inference protein motif:PFAM:PF00355 db_xref GO:0016491 db_xref InterPro:IPR017941 1318890 1319930 gene locus_tag Alide2_1255 1318890 1319930 CDS product peptidase S49 transl_table 11 protein_id gb|AEB83659.1||gnl|jgi|Alide2_1255 note PFAM: Peptidase S49~KEGG: dia:Dtpsy_2639 peptidase S49 inference protein motif:PFAM:PF01343 db_xref GO:0008233 db_xref InterPro:IPR002142 1320720 1319935 gene locus_tag Alide2_1256 1320720 1319935 CDS product Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase transl_table 11 protein_id gb|AEB83660.1||gnl|jgi|Alide2_1256 note PFAM: Tetrapyrrole methylase~KEGG: dia:Dtpsy_2638 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase inference protein motif:PFAM:PF00590 db_xref GO:0008168 db_xref InterPro:IPR000878 1321316 1320717 gene locus_tag Alide2_1257 1321316 1320717 CDS product maf protein transl_table 11 protein_id gb|AEB83661.1||gnl|jgi|Alide2_1257 note KEGG: dia:Dtpsy_2637 maf protein~TIGRFAM: Maf-like protein~PFAM: Maf-like protein inference protein motif:TFAM:TIGR00172 db_xref InterPro:IPR003697 1321343 1321894 gene locus_tag Alide2_1258 1321343 1321894 CDS product protein of unknown function DUF177 transl_table 11 protein_id gb|AEB83662.1||gnl|jgi|Alide2_1258 note PFAM: Protein of unknown function DUF177~KEGG: dia:Dtpsy_2636 protein of unknown function DUF177 inference protein motif:PFAM:PF02620 db_xref InterPro:IPR003772 1322031 1322213 gene locus_tag Alide2_1259 1322031 1322213 CDS product ribosomal protein L32 transl_table 11 protein_id gb|AEB83663.1||gnl|jgi|Alide2_1259 note KEGG: aav:Aave_1181 50S ribosomal protein L32~TIGRFAM: Ribosomal protein L32p~PFAM: Ribosomal protein L32p inference protein motif:TFAM:TIGR01031 db_xref GO:0003735 db_xref InterPro:IPR002677 1322336 1323367 gene locus_tag Alide2_1260 1322336 1323367 CDS product Phosphate acyltransferase transl_table 11 protein_id gb|AEB83664.1||gnl|jgi|Alide2_1260 note PFAM: Fatty acid synthesis PlsX protein~manually curated~TIGRFAM: Phospholipid biosynthesis protein, PlsX-like~KEGG: dia:Dtpsy_2634 putative glycerol-3-phosphate acyltransferase PlsX~HAMAP: Phospholipid biosynthesis protein, PlsX-like inference protein motif:HAMAP:MF_00019 db_xref InterPro:IPR003664 db_xref InterPro:IPR012281 1323389 1324369 gene locus_tag Alide2_1261 1323389 1324369 CDS product 3-oxoacyl-(acyl-carrier-protein) synthase III EC_number 2.3.1.41 transl_table 11 protein_id gb|AEB83665.1||gnl|jgi|Alide2_1261 note TIGRFAM: Beta-ketoacyl-acyl carrier protein synthase III (FabH)~KEGG: dia:Dtpsy_2633 3-oxoacyl-(acyl carrier protein) synthase III~PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III inference protein motif:TFAM:TIGR00747 db_xref GO:0004315 db_xref InterPro:IPR004655 db_xref InterPro:IPR013747 db_xref InterPro:IPR013751 1324431 1325384 gene locus_tag Alide2_1262 1324431 1325384 CDS product malonyl CoA-acyl carrier protein transacylase EC_number 2.3.1.39 transl_table 11 protein_id gb|AEB83666.1||gnl|jgi|Alide2_1262 note TIGRFAM: Malonyl CoA-acyl carrier protein transacylase~KEGG: ajs:Ajs_3279 [acyl-carrier-protein] S-malonyltransferase~PFAM: Acyl transferase inference protein motif:TFAM:TIGR00128 db_xref GO:0004314 db_xref InterPro:IPR004410 db_xref InterPro:IPR014043 1325381 1326118 gene locus_tag Alide2_1263 1325381 1326118 CDS product 3-oxoacyl-(acyl-carrier-protein) reductase transl_table 11 protein_id gb|AEB83667.1||gnl|jgi|Alide2_1263 note KEGG: dia:Dtpsy_2631 3-oxoacyl-(acyl-carrier-protein) reductase~TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase~PFAM: Short-chain dehydrogenase/reductase SDR inference protein motif:TFAM:TIGR01830 db_xref GO:0004316 db_xref GO:0051287 db_xref InterPro:IPR002198 db_xref InterPro:IPR011284 1326222 1326461 gene locus_tag Alide2_1264 1326222 1326461 CDS product Acyl carrier protein transl_table 11 protein_id gb|AEB83668.1||gnl|jgi|Alide2_1264 note SMART: Polyketide synthase, phosphopantetheine-binding~TIGRFAM: Acyl carrier protein (ACP)~KEGG: ctt:CtCNB1_0973 acyl carrier protein~HAMAP: Acyl carrier protein (ACP)~PFAM: Phosphopantetheine-binding inference protein motif:HAMAP:MF_01217 db_xref InterPro:IPR003231 db_xref InterPro:IPR006163 db_xref InterPro:IPR020806 1326520 1327764 gene locus_tag Alide2_1265 1326520 1327764 CDS product 3-oxoacyl-(acyl-carrier-protein) synthase 2 EC_number 2.3.1.179 transl_table 11 protein_id gb|AEB83669.1||gnl|jgi|Alide2_1265 note TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2~KEGG: dia:Dtpsy_2629 3-oxoacyl-(acyl-carrier-protein) synthase 2~PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal inference protein motif:TFAM:TIGR03150 db_xref GO:0051287 db_xref InterPro:IPR014030 db_xref InterPro:IPR014031 db_xref InterPro:IPR017568 1327827 1328348 gene locus_tag Alide2_1266 1327827 1328348 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83670.1||gnl|jgi|Alide2_1266 note KEGG: dia:Dtpsy_2628 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_2628 1328345 1328980 gene locus_tag Alide2_1267 1328345 1328980 CDS product RNA polymerase, sigma-24 subunit, ECF subfamily transl_table 11 protein_id gb|AEB83671.1||gnl|jgi|Alide2_1267 note KEGG: dia:Dtpsy_2627 RNA polymerase sigma factor RpoE~TIGRFAM: RNA polymerase sigma-70 RpoE type; RNA polymerase sigma-70~PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2 inference protein motif:TFAM:TIGR02939 db_xref GO:0003677 db_xref GO:0003700 db_xref GO:0016987 db_xref InterPro:IPR007627 db_xref InterPro:IPR013249 db_xref InterPro:IPR014284 db_xref InterPro:IPR014286 1329005 1329655 gene locus_tag Alide2_1268 1329005 1329655 CDS product Anti sigma-E protein RseA family protein transl_table 11 protein_id gb|AEB83672.1||gnl|jgi|Alide2_1268 note PFAM: Anti sigma-E protein RseA, N-terminal~KEGG: dia:Dtpsy_2626 anti sigma-E protein, RseA inference protein motif:PFAM:PF03872 db_xref GO:0005515 db_xref GO:0016989 db_xref InterPro:IPR005572 1329766 1330764 gene locus_tag Alide2_1269 1329766 1330764 CDS product sigma E regulatory protein, MucB/RseB transl_table 11 protein_id gb|AEB83673.1||gnl|jgi|Alide2_1269 note KEGG: dia:Dtpsy_2625 sigma E regulatory protein, MucB/RseB~manually curated~PFAM: MucB/RseB inference protein motif:PFAM:PF03888 db_xref InterPro:IPR005588 1330874 1332355 gene locus_tag Alide2_1270 1330874 1332355 CDS product protease Do EC_number 3.4.21.108 transl_table 11 protein_id gb|AEB83674.1||gnl|jgi|Alide2_1270 note SMART: PDZ/DHR/GLGF~TIGRFAM: Peptidase S1C, Do~KEGG: dia:Dtpsy_2624 protease Do~PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF inference protein motif:TFAM:TIGR02037 db_xref GO:0004252 db_xref InterPro:IPR001254 db_xref InterPro:IPR001478 db_xref InterPro:IPR011782 1332780 1334588 gene locus_tag Alide2_1271 1332780 1334588 CDS product GTP-binding protein LepA transl_table 11 protein_id gb|AEB83675.1||gnl|jgi|Alide2_1271 note TIGRFAM: GTP-binding protein LepA; Small GTP-binding protein~PFAM: Protein synthesis factor, GTP-binding; GTP-binding protein LepA, C-terminal; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal~KEGG: dia:Dtpsy_2623 GTP-binding protein LepA~SMART: Translation elongation factor EFG/EF2, C-terminal inference protein motif:TFAM:TIGR01393 db_xref GO:0005525 db_xref InterPro:IPR000640 db_xref InterPro:IPR000795 db_xref InterPro:IPR004161 db_xref InterPro:IPR005225 db_xref InterPro:IPR006297 db_xref InterPro:IPR013842 1334595 1335569 gene locus_tag Alide2_1272 1334595 1335569 CDS product signal peptidase I transl_table 11 protein_id gb|AEB83676.1||gnl|jgi|Alide2_1272 note KEGG: dia:Dtpsy_2622 signal peptidase I~TIGRFAM: Peptidase S26A, signal peptidase I~PFAM: Peptidase S24/S26A/S26B, conserved region; Peptidase S26, conserved region inference protein motif:TFAM:TIGR02227 db_xref GO:0008236 db_xref InterPro:IPR000223 db_xref InterPro:IPR019533 db_xref InterPro:IPR019759 1335577 1335948 gene locus_tag Alide2_1273 1335577 1335948 CDS product putative transmembrane protein transl_table 11 protein_id gb|AEB83677.1||gnl|jgi|Alide2_1273 note KEGG: dia:Dtpsy_2621 putative transmembrane protein inference similar to AA sequence:KEGG:Dtpsy_2621 1335951 1336637 gene locus_tag Alide2_1274 1335951 1336637 CDS product Ribonuclease 3 EC_number 3.1.26.3 transl_table 11 protein_id gb|AEB83678.1||gnl|jgi|Alide2_1274 note KEGG: ajs:Ajs_3267 ribonuclease III~PFAM: Ribonuclease III; Double-stranded RNA-binding~TIGRFAM: Ribonuclease III, bacterial~HAMAP: Ribonuclease III, bacterial~SMART: Ribonuclease III; Double-stranded RNA-binding inference protein motif:HAMAP:MF_00104 db_xref InterPro:IPR000999 db_xref InterPro:IPR001159 db_xref InterPro:IPR011907 1336706 1337647 gene locus_tag Alide2_1275 1336706 1337647 CDS product GTP-binding protein Era transl_table 11 protein_id gb|AEB83679.1||gnl|jgi|Alide2_1275 note KEGG: dia:Dtpsy_2619 GTP-binding protein Era~TIGRFAM: GTP-binding protein Era; Small GTP-binding protein~PFAM: GTP-binding protein, HSR1-related; K Homology, type 2 inference protein motif:TFAM:TIGR00436 db_xref GO:0003723 db_xref GO:0005525 db_xref InterPro:IPR002917 db_xref InterPro:IPR004044 db_xref InterPro:IPR005225 db_xref InterPro:IPR005662 1337869 1338642 gene locus_tag Alide2_1276 1337869 1338642 CDS product DNA repair protein RecO transl_table 11 protein_id gb|AEB83680.1||gnl|jgi|Alide2_1276 note KEGG: ajs:Ajs_3265 DNA repair protein RecO~TIGRFAM: Recombination protein O, RecO~PFAM: DNA replication/recombination mediator RecO, N-terminal; Recombination protein O, RecO inference protein motif:TFAM:TIGR00613 db_xref InterPro:IPR003717 db_xref InterPro:IPR022572 1338639 1339406 gene locus_tag Alide2_1277 1338639 1339406 CDS product pyridoxal phosphate biosynthetic protein PdxJ EC_number 2.6.99.2 transl_table 11 protein_id gb|AEB83681.1||gnl|jgi|Alide2_1277 note TIGRFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ~KEGG: dia:Dtpsy_2616 pyridoxine 5'-phosphate synthase~PFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ inference protein motif:TFAM:TIGR00559 db_xref InterPro:IPR004569 1339464 1339856 gene locus_tag Alide2_1278 1339464 1339856 CDS product phosphopantetheine-protein transferase transl_table 11 protein_id gb|AEB83682.1||gnl|jgi|Alide2_1278 note KEGG: dia:Dtpsy_2615 4'-phosphopantetheinyl transferase~TIGRFAM: Phosphopantethiene-protein transferase; Holo-[acyl carrier protein] synthase~PFAM: 4'-phosphopantetheinyl transferase inference protein motif:TFAM:TIGR00556 db_xref GO:0000287 db_xref GO:0008897 db_xref InterPro:IPR002582 db_xref InterPro:IPR004568 db_xref InterPro:IPR008278 1339921 1341003 gene locus_tag Alide2_1279 1339921 1341003 CDS product glycoside hydrolase family 3 domain protein transl_table 11 protein_id gb|AEB83683.1||gnl|jgi|Alide2_1279 note PFAM: Glycoside hydrolase, family 3, N-terminal~KEGG: dia:Dtpsy_2614 beta-N-acetylhexosaminidase inference protein motif:PFAM:PF00933 db_xref GO:0008897 db_xref InterPro:IPR001764 1341000 1342067 gene locus_tag Alide2_1280 1341000 1342067 CDS product 6-phosphofructokinase EC_number 2.7.1.11 transl_table 11 protein_id gb|AEB83684.1||gnl|jgi|Alide2_1280 note KEGG: ajs:Ajs_3260 6-phosphofructokinase~PFAM: Phosphofructokinase domain inference protein motif:PRIAM:2.7.1.11 db_xref InterPro:IPR000023 1342858 1342148 gene locus_tag Alide2_1281 1342858 1342148 CDS product Monosaccharide-transporting ATPase EC_number 3.6.3.17 transl_table 11 protein_id gb|AEB83685.1||gnl|jgi|Alide2_1281 note PFAM: ABC transporter-like~KEGG: dia:Dtpsy_2610 ABC transporter related~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.17 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 1343631 1342858 gene locus_tag Alide2_1282 1343631 1342858 CDS product Sulfate-transporting ATPase EC_number 3.6.3.25 transl_table 11 protein_id gb|AEB83686.1||gnl|jgi|Alide2_1282 note PFAM: ABC transporter-like~KEGG: xtr:100485612 putative ribose/galactose/methyl galactoside import ATP-binding protein-like~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.25 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 1344890 1343631 gene locus_tag Alide2_1283 1344890 1343631 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB83687.1||gnl|jgi|Alide2_1283 note PFAM: ABC transporter permease; High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal~KEGG: dia:Dtpsy_2608 leucine/isoleucine/valine transporter permease subunit inference protein motif:PFAM:PF02653 db_xref GO:0005215 db_xref InterPro:IPR001851 db_xref InterPro:IPR021807 1345816 1344890 gene locus_tag Alide2_1284 1345816 1344890 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB83688.1||gnl|jgi|Alide2_1284 note PFAM: ABC transporter permease~KEGG: dia:Dtpsy_2607 inner-membrane translocator inference protein motif:PFAM:PF02653 db_xref GO:0005215 db_xref InterPro:IPR001851 1347055 1345937 gene locus_tag Alide2_1285 1347055 1345937 CDS product Extracellular ligand-binding receptor transl_table 11 protein_id gb|AEB83689.1||gnl|jgi|Alide2_1285 note PFAM: Extracellular ligand-binding receptor~KEGG: dac:Daci_4331 extracellular ligand-binding receptor inference protein motif:PFAM:PF01094 db_xref InterPro:IPR001828 1347910 1347248 gene locus_tag Alide2_1286 1347910 1347248 CDS product MscS Mechanosensitive ion channel transl_table 11 protein_id gb|AEB83690.1||gnl|jgi|Alide2_1286 note PFAM: Mechanosensitive ion channel MscS~KEGG: ajs:Ajs_3252 small-conductance mechanosensitive channel-like protein inference protein motif:PFAM:PF00924 db_xref InterPro:IPR006685 1349454 1347907 gene locus_tag Alide2_1287 1349454 1347907 CDS product lysyl-tRNA synthetase EC_number 6.1.1.6 transl_table 11 protein_id gb|AEB83691.1||gnl|jgi|Alide2_1287 note TIGRFAM: Lysyl-tRNA synthetase, class II~KEGG: ajs:Ajs_3250 lysyl-tRNA synthetase~PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type inference protein motif:TFAM:TIGR00499 db_xref GO:0000166 db_xref GO:0004824 db_xref GO:0005524 db_xref InterPro:IPR002313 db_xref InterPro:IPR004364 db_xref InterPro:IPR004365 1350120 1349494 gene locus_tag Alide2_1288 1350120 1349494 CDS product sugar transferase transl_table 11 protein_id gb|AEB83692.1||gnl|jgi|Alide2_1288 note PFAM: Bacterial sugar transferase~KEGG: lch:Lcho_0300 sugar transferase inference protein motif:PFAM:PF02397 db_xref InterPro:IPR003362 1351299 1350127 gene locus_tag Alide2_1289 1351299 1350127 CDS product Glutamine--scyllo-inositol transaminase EC_number 2.6.1.50 transl_table 11 protein_id gb|AEB83693.1||gnl|jgi|Alide2_1289 note KEGG: mpt:Mpe_A0607 lipopolysaccharide biosynthesis protein~PFAM: DegT/DnrJ/EryC1/StrS aminotransferase inference protein motif:PRIAM:2.6.1.50 db_xref InterPro:IPR000653 1351991 1351296 gene locus_tag Alide2_1290 1351991 1351296 CDS product Methyltransferase type 11 transl_table 11 protein_id gb|AEB83694.1||gnl|jgi|Alide2_1290 note PFAM: Methyltransferase type 11~KEGG: mpt:Mpe_A0605 hypothetical protein inference protein motif:PFAM:PF08241 db_xref GO:0008168 db_xref InterPro:IPR013216 1353016 1351988 gene locus_tag Alide2_1291 1353016 1351988 CDS product glycosyl transferase family 2 transl_table 11 protein_id gb|AEB83695.1||gnl|jgi|Alide2_1291 note PFAM: Glycosyl transferase, family 2~KEGG: bpt:Bpet1524 glycosyltransferase inference protein motif:PFAM:PF00535 db_xref InterPro:IPR001173 1354062 1353013 gene locus_tag Alide2_1292 1354062 1353013 CDS product glycosyl transferase group 1 transl_table 11 protein_id gb|AEB83696.1||gnl|jgi|Alide2_1292 note PFAM: Glycosyl transferase, group 1~KEGG: bpt:Bpet1525 glycosyltransferase inference protein motif:PFAM:PF00534 db_xref InterPro:IPR001296 1354666 1354064 gene locus_tag Alide2_1293 1354666 1354064 CDS product acetyltransferase transl_table 11 protein_id gb|AEB83697.1||gnl|jgi|Alide2_1293 note KEGG: bpt:Bpet1526 acetyltransferase inference similar to AA sequence:KEGG:Bpet1526 db_xref InterPro:IPR001451 1355882 1354650 gene locus_tag Alide2_1294 1355882 1354650 CDS product polysaccharide biosynthesis protein transl_table 11 protein_id gb|AEB83698.1||gnl|jgi|Alide2_1294 note PFAM: Polysaccharide biosynthesis protein~KEGG: bpt:Bpet1527 hypothetical protein inference protein motif:PFAM:PF01943 db_xref InterPro:IPR002797 1357780 1355879 gene locus_tag Alide2_1295 1357780 1355879 CDS product polysaccharide biosynthesis protein CapD transl_table 11 protein_id gb|AEB83699.1||gnl|jgi|Alide2_1295 note PFAM: Polysaccharide biosynthesis protein CapD-like~KEGG: pol:Bpro_3983 polysaccharide biosynthesis protein CapD inference protein motif:PFAM:PF02719 db_xref InterPro:IPR003869 1358452 1357817 gene locus_tag Alide2_1296 1358452 1357817 CDS product peptidase S16 lon domain protein transl_table 11 protein_id gb|AEB83700.1||gnl|jgi|Alide2_1296 note PFAM: Peptidase S16, lon N-terminal~KEGG: xtr:100498456 hypothetical protein LOC100498456 inference protein motif:PFAM:PF02190 db_xref GO:0004176 db_xref InterPro:IPR003111 1358546 1359094 gene locus_tag Alide2_1297 1358546 1359094 CDS product protein of unknown function YGGT transl_table 11 protein_id gb|AEB83701.1||gnl|jgi|Alide2_1297 note PFAM: Uncharacterised protein family Ycf19~KEGG: dia:Dtpsy_2595 protein of unknown function YGGT inference protein motif:PFAM:PF02325 db_xref InterPro:IPR003425 1360043 1359171 gene locus_tag Alide2_1298 1360043 1359171 CDS product acetyl-CoA carboxylase, carboxyl transferase, beta subunit EC_number 6.4.1.2 transl_table 11 protein_id gb|AEB83702.1||gnl|jgi|Alide2_1298 note TIGRFAM: Acetyl-CoA carboxylase carboxyl transferase, beta subunit~KEGG: ajs:Ajs_3241 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha~PFAM: Carboxyl transferase inference protein motif:TFAM:TIGR00515 db_xref GO:0003989 db_xref InterPro:IPR000022 db_xref InterPro:IPR000438 1360881 1360072 gene locus_tag Alide2_1299 1360881 1360072 CDS product tryptophan synthase, alpha subunit EC_number 4.2.1.20 transl_table 11 protein_id gb|AEB83703.1||gnl|jgi|Alide2_1299 note TIGRFAM: Tryptophan synthase, alpha chain~KEGG: ajs:Ajs_3240 tryptophan synthase subunit alpha~PFAM: Tryptophan synthase, alpha chain inference protein motif:TFAM:TIGR00262 db_xref GO:0004834 db_xref InterPro:IPR002028 1362146 1360878 gene locus_tag Alide2_1300 1362146 1360878 CDS product tryptophan synthase, beta subunit EC_number 4.2.1.20 transl_table 11 protein_id gb|AEB83704.1||gnl|jgi|Alide2_1300 note TIGRFAM: Tryptophan synthase, beta chain~KEGG: ajs:Ajs_3239 tryptophan synthase subunit beta~PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit inference protein motif:TFAM:TIGR00263 db_xref GO:0004834 db_xref InterPro:IPR001926 db_xref InterPro:IPR006654 1362863 1362147 gene locus_tag Alide2_1301 1362863 1362147 CDS product Phosphoribosylanthranilate isomerase EC_number 5.3.1.24 transl_table 11 protein_id gb|AEB83705.1||gnl|jgi|Alide2_1301 note KEGG: ajs:Ajs_3238 phosphoribosylanthranilate isomerase~PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI) inference protein motif:PRIAM:5.3.1.24 db_xref InterPro:IPR001240 1363678 1362860 gene locus_tag Alide2_1302 1363678 1362860 CDS product tRNA pseudouridine synthase A transl_table 11 protein_id gb|AEB83706.1||gnl|jgi|Alide2_1302 note KEGG: dia:Dtpsy_2590 tRNA pseudouridine synthase A~TIGRFAM: Pseudouridine synthase I, TruA~PFAM: Pseudouridine synthase I, TruA, alpha/beta domain inference protein motif:TFAM:TIGR00071 db_xref GO:0003723 db_xref GO:0009982 db_xref InterPro:IPR001406 db_xref InterPro:IPR020097 1366415 1363743 gene locus_tag Alide2_1303 1366415 1363743 CDS product FimV N-terminal domain protein transl_table 11 protein_id gb|AEB83707.1||gnl|jgi|Alide2_1303 note TIGRFAM: Motility protein FimV, N-terminal; Motility protein FimV, C-terminal~KEGG: ajs:Ajs_3236 putative transmembrane protein inference protein motif:TFAM:TIGR03505 db_xref InterPro:IPR020011 db_xref InterPro:IPR020012 1367750 1366638 gene locus_tag Alide2_1304 1367750 1366638 CDS product aspartate-semialdehyde dehydrogenase EC_number 1.2.1.11 transl_table 11 protein_id gb|AEB83708.1||gnl|jgi|Alide2_1304 note SMART: Semialdehyde dehydrogenase, NAD-binding~TIGRFAM: Aspartate-semialdehyde dehydrogenase, proteobacteria~KEGG: ctt:CtCNB1_1004 aspartate-semialdehyde dehydrogenase~PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD-binding inference protein motif:TFAM:TIGR01745 db_xref GO:0004073 db_xref GO:0050661 db_xref InterPro:IPR000534 db_xref InterPro:IPR011534 db_xref InterPro:IPR012280 1369090 1368020 gene locus_tag Alide2_1305 1369090 1368020 CDS product 3-isopropylmalate dehydrogenase EC_number 1.1.1.85 transl_table 11 protein_id gb|AEB83709.1||gnl|jgi|Alide2_1305 note TIGRFAM: Isopropylmalate dehydrogenase~KEGG: dia:Dtpsy_2586 3-isopropylmalate dehydrogenase~PFAM: Isocitrate/isopropylmalate dehydrogenase inference protein motif:TFAM:TIGR00169 db_xref GO:0003862 db_xref InterPro:IPR001804 db_xref InterPro:IPR004429 1369815 1369165 gene locus_tag Alide2_1306 1369815 1369165 CDS product 3-isopropylmalate dehydratase, small subunit transl_table 11 protein_id gb|AEB83710.1||gnl|jgi|Alide2_1306 note KEGG: dia:Dtpsy_2585 isopropylmalate isomerase small subunit~TIGRFAM: 3-isopropylmalate dehydratase, small subunit~PFAM: Aconitase A/isopropylmalate dehydratase small subunit, swivel inference protein motif:TFAM:TIGR00171 db_xref GO:0003861 db_xref InterPro:IPR000573 db_xref InterPro:IPR004431 1369964 1369839 gene locus_tag Alide2_1307 1369964 1369839 CDS product Entericidin EcnAB transl_table 11 protein_id gb|AEB83711.1||gnl|jgi|Alide2_1307 note PFAM: Entericidin EcnAB~KEGG: dac:Daci_5236 entericidin EcnAB inference protein motif:PFAM:PF08085 db_xref InterPro:IPR012556 1371409 1369988 gene locus_tag Alide2_1308 1371409 1369988 CDS product 3-isopropylmalate dehydratase, large subunit transl_table 11 protein_id gb|AEB83712.1||gnl|jgi|Alide2_1308 note KEGG: ajs:Ajs_3229 isopropylmalate isomerase large subunit~TIGRFAM: 3-isopropylmalate dehydratase, large subunit~PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha inference protein motif:TFAM:TIGR00170 db_xref GO:0003861 db_xref InterPro:IPR001030 db_xref InterPro:IPR004430 1372368 1371430 gene locus_tag Alide2_1309 1372368 1371430 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB83713.1||gnl|jgi|Alide2_1309 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: dia:Dtpsy_2581 transcriptional regulator, LysR family inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 1373921 1372557 gene locus_tag Alide2_1310 1373921 1372557 CDS product Beta-Casp domain protein transl_table 11 protein_id gb|AEB83714.1||gnl|jgi|Alide2_1310 note KEGG: dia:Dtpsy_2580 beta-lactamase domain protein~PFAM: Beta-Casp domain; RNA-metabolising metallo-beta-lactamase; Beta-lactamase-like~SMART: Beta-lactamase-like inference protein motif:PFAM:PF10996 db_xref GO:0016787 db_xref InterPro:IPR001279 db_xref InterPro:IPR011108 db_xref InterPro:IPR022712 1375110 1373962 gene locus_tag Alide2_1311 1375110 1373962 CDS product cytochrome P450 transl_table 11 protein_id gb|AEB83715.1||gnl|jgi|Alide2_1311 note PFAM: Cytochrome P450~KEGG: ajs:Ajs_3226 cytochrome P450 inference protein motif:PFAM:PF00067 db_xref GO:0004497 db_xref GO:0005506 db_xref GO:0009055 db_xref GO:0020037 db_xref InterPro:IPR001128 1376613 1375129 gene locus_tag Alide2_1312 1376613 1375129 CDS product UbiD family decarboxylase transl_table 11 protein_id gb|AEB83716.1||gnl|jgi|Alide2_1312 note KEGG: ajs:Ajs_3225 3-octaprenyl-4hydroxybenzoate decarboxylase~TIGRFAM: Carboxylyase-related~PFAM: Carboxylyase-related inference protein motif:TFAM:TIGR00148 db_xref GO:0016831 db_xref InterPro:IPR002830 1377253 1376669 gene locus_tag Alide2_1313 1377253 1376669 CDS product 3-octaprenyl-4-hydroxybenzoate carboxy-lyase transl_table 11 protein_id gb|AEB83717.1||gnl|jgi|Alide2_1313 note KEGG: dia:Dtpsy_2577 3-octaprenyl-4-hydroxybenzoate carboxy-lyase~TIGRFAM: Phenylacrylic acid decarboxylase~PFAM: Flavoprotein inference protein motif:TFAM:TIGR00421 db_xref GO:0016831 db_xref InterPro:IPR003382 db_xref InterPro:IPR004507 1377657 1377250 gene locus_tag Alide2_1314 1377657 1377250 CDS product DGC domain protein transl_table 11 protein_id gb|AEB83718.1||gnl|jgi|Alide2_1314 note PFAM: DGC~KEGG: ajs:Ajs_3223 hypothetical protein inference protein motif:PFAM:PF08859 db_xref InterPro:IPR014958 1378172 1377654 gene locus_tag Alide2_1315 1378172 1377654 CDS product Sterol-binding domain protein transl_table 11 protein_id gb|AEB83719.1||gnl|jgi|Alide2_1315 note PFAM: SCP2 sterol-binding domain~KEGG: ajs:Ajs_3222 hypothetical protein inference protein motif:PFAM:PF02036 db_xref GO:0032934 db_xref InterPro:IPR003033 1379115 1378192 gene locus_tag Alide2_1316 1379115 1378192 CDS product peptidase U32 transl_table 11 protein_id gb|AEB83720.1||gnl|jgi|Alide2_1316 note PFAM: Peptidase U32~KEGG: ajs:Ajs_3221 peptidase U32 inference protein motif:PFAM:PF01136 db_xref GO:0008233 db_xref InterPro:IPR001539 1380242 1379121 gene locus_tag Alide2_1317 1380242 1379121 CDS product peptidase U32 transl_table 11 protein_id gb|AEB83721.1||gnl|jgi|Alide2_1317 note PFAM: Peptidase U32~KEGG: ajs:Ajs_3220 peptidase U32 inference protein motif:PFAM:PF01136 db_xref GO:0008233 db_xref InterPro:IPR001539 1380441 1381811 gene locus_tag Alide2_1318 1380441 1381811 CDS product Tryptophanase EC_number 4.1.99.1 transl_table 11 protein_id gb|AEB83722.1||gnl|jgi|Alide2_1318 note KEGG: rfr:Rfer_2475 tryptophanase~PFAM: Aromatic amino acid beta-eliminating lyase/threonine aldolase inference protein motif:PRIAM:4.1.99.1 db_xref InterPro:IPR001597 1382550 1381885 gene locus_tag Alide2_1319 1382550 1381885 CDS product PEP motif putative anchor domain protein transl_table 11 protein_id gb|AEB83723.1||gnl|jgi|Alide2_1319 note KEGG: maq:Maqu_1010 hypothetical protein~TIGRFAM: PEP-CTERM anchor~PFAM: PEP-CTERM bacterial inference protein motif:TFAM:TIGR02595 db_xref InterPro:IPR011449 db_xref InterPro:IPR013424 1383898 1382765 gene locus_tag Alide2_1320 1383898 1382765 CDS product chaperone protein DnaJ transl_table 11 protein_id gb|AEB83724.1||gnl|jgi|Alide2_1320 note TIGRFAM: Chaperone DnaJ~PFAM: Chaperone DnaJ, C-terminal; Heat shock protein DnaJ, cysteine-rich domain; Heat shock protein DnaJ, N-terminal~KEGG: dia:Dtpsy_2572 chaperone protein DnaJ~SMART: Heat shock protein DnaJ, N-terminal inference protein motif:TFAM:TIGR02349 db_xref GO:0005524 db_xref GO:0051082 db_xref InterPro:IPR001305 db_xref InterPro:IPR001623 db_xref InterPro:IPR002939 db_xref InterPro:IPR012724 1385937 1383994 gene locus_tag Alide2_1321 1385937 1383994 CDS product chaperone protein DnaK transl_table 11 protein_id gb|AEB83725.1||gnl|jgi|Alide2_1321 note KEGG: dia:Dtpsy_2571 molecular chaperone DnaK~TIGRFAM: Chaperone DnaK~PFAM: Heat shock protein 70 inference protein motif:TFAM:TIGR02350 db_xref GO:0005524 db_xref GO:0051082 db_xref InterPro:IPR012725 db_xref InterPro:IPR013126 1386572 1386030 gene locus_tag Alide2_1322 1386572 1386030 CDS product GrpE protein transl_table 11 protein_id gb|AEB83726.1||gnl|jgi|Alide2_1322 note PFAM: GrpE nucleotide exchange factor~KEGG: dia:Dtpsy_2570 heat shock protein GrpE inference protein motif:PFAM:PF01025 db_xref GO:0000774 db_xref GO:0042803 db_xref GO:0051087 db_xref InterPro:IPR000740 1386808 1387182 gene locus_tag Alide2_1323 1386808 1387182 CDS product ribosomal protein S6 transl_table 11 protein_id gb|AEB83727.1||gnl|jgi|Alide2_1323 note KEGG: dia:Dtpsy_2569 30S ribosomal protein S6~TIGRFAM: Ribosomal protein S6~PFAM: Ribosomal protein S6 inference protein motif:TFAM:TIGR00166 db_xref GO:0003735 db_xref GO:0019843 db_xref InterPro:IPR000529 1387205 1387495 gene locus_tag Alide2_1324 1387205 1387495 CDS product single-strand binding protein/Primosomal replication protein n transl_table 11 protein_id gb|AEB83728.1||gnl|jgi|Alide2_1324 note PFAM: Primosome PriB/single-strand DNA-binding~KEGG: dia:Dtpsy_2568 putative primosomal replication protein inference protein motif:PFAM:PF00436 db_xref GO:0003697 db_xref InterPro:IPR000424 1387514 1387795 gene locus_tag Alide2_1325 1387514 1387795 CDS product 30S ribosomal protein S18 transl_table 11 protein_id gb|AEB83729.1||gnl|jgi|Alide2_1325 note TIGRFAM: Ribosomal protein S18~HAMAP: Ribosomal protein S18~KEGG: aav:Aave_1230 30S ribosomal protein S18~PFAM: Ribosomal protein S18 inference protein motif:HAMAP:MF_00270 db_xref InterPro:IPR001648 1387810 1388262 gene locus_tag Alide2_1326 1387810 1388262 CDS product ribosomal protein L9 transl_table 11 protein_id gb|AEB83730.1||gnl|jgi|Alide2_1326 note KEGG: dia:Dtpsy_2566 50S ribosomal protein L9~TIGRFAM: Ribosomal protein L9, bacteria/chloroplast~PFAM: Ribosomal protein L9, C-terminal; Ribosomal protein L9, N-terminal inference protein motif:TFAM:TIGR00158 db_xref GO:0003735 db_xref InterPro:IPR020069 db_xref InterPro:IPR020070 db_xref InterPro:IPR020594 1388384 1389862 gene locus_tag Alide2_1327 1388384 1389862 CDS product replicative DNA helicase transl_table 11 protein_id gb|AEB83731.1||gnl|jgi|Alide2_1327 note TIGRFAM: DNA helicase, DnaB type~PFAM: DNA helicase, DnaB-like, C-terminal; DNA helicase, DnaB-like, N-terminal~KEGG: dia:Dtpsy_2565 replicative DNA helicase~SMART: ATPase, AAA+ type, core inference protein motif:TFAM:TIGR00665 db_xref GO:0003677 db_xref GO:0003678 db_xref GO:0005524 db_xref InterPro:IPR003593 db_xref InterPro:IPR007692 db_xref InterPro:IPR007693 db_xref InterPro:IPR007694 1389933 1391465 gene locus_tag Alide2_1328 1389933 1391465 CDS product L-aminoadipate-semialdehyde dehydrogenase EC_number 1.2.1.31 transl_table 11 protein_id gb|AEB83732.1||gnl|jgi|Alide2_1328 note KEGG: bpd:BURPS668_A2080 putative piperideine-6-carboxylate dehydrogenase~PFAM: Aldehyde dehydrogenase domain inference protein motif:PRIAM:1.2.1.31 db_xref InterPro:IPR015590 1393276 1391537 gene locus_tag Alide2_1329 1393276 1391537 CDS product PhoH family protein transl_table 11 protein_id gb|AEB83733.1||gnl|jgi|Alide2_1329 note KEGG: dia:Dtpsy_2563 PhoH family protein~PFAM: PhoH-like protein~SMART: Nucleotide binding protein, PINc inference protein motif:PFAM:PF02562 db_xref GO:0005524 db_xref InterPro:IPR003714 db_xref InterPro:IPR006596 1393921 1393433 gene locus_tag Alide2_1330 1393921 1393433 CDS product alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen transl_table 11 protein_id gb|AEB83734.1||gnl|jgi|Alide2_1330 note PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant~KEGG: dia:Dtpsy_2562 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen inference protein motif:PFAM:PF00578 db_xref GO:0016209 db_xref GO:0016491 db_xref InterPro:IPR000866 1394788 1394099 gene locus_tag Alide2_1331 1394788 1394099 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83735.1||gnl|jgi|Alide2_1331 note KEGG: ajs:Ajs_1106 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1106 1395046 1395633 gene locus_tag Alide2_1332 1395046 1395633 CDS product Cytochrome b/b6 domain protein transl_table 11 protein_id gb|AEB83736.1||gnl|jgi|Alide2_1332 note PFAM: Cytochrome b/b6, N-terminal~KEGG: dia:Dtpsy_1026 cytochrome b561 inference protein motif:PFAM:PF00033 db_xref GO:0009055 db_xref GO:0016491 db_xref InterPro:IPR005797 1395630 1396250 gene locus_tag Alide2_1333 1395630 1396250 CDS product YceI family protein transl_table 11 protein_id gb|AEB83737.1||gnl|jgi|Alide2_1333 note KEGG: dia:Dtpsy_1027 YceI family protein~PFAM: Lipid/polyisoprenoid-binding, YceI-like~SMART: Lipid/polyisoprenoid-binding, YceI-like inference protein motif:PFAM:PF04264 db_xref InterPro:IPR007372 1396305 1396880 gene locus_tag Alide2_1334 1396305 1396880 CDS product YceI family protein transl_table 11 protein_id gb|AEB83738.1||gnl|jgi|Alide2_1334 note KEGG: dia:Dtpsy_1028 YceI family protein~PFAM: Lipid/polyisoprenoid-binding, YceI-like~SMART: Lipid/polyisoprenoid-binding, YceI-like inference protein motif:PFAM:PF04264 db_xref InterPro:IPR007372 1399259 1396950 gene locus_tag Alide2_1335 1399259 1396950 CDS product Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) EC_number 1.1.1.40 transl_table 11 protein_id gb|AEB83739.1||gnl|jgi|Alide2_1335 note PFAM: Phosphate acetyl/butaryl transferase; Malic enzyme, NAD-binding; Malic enzyme, N-terminal~KEGG: ajs:Ajs_1112 malic enzyme~SMART: Malic enzyme, NAD-binding inference protein motif:PRIAM:1.1.1.40 db_xref InterPro:IPR002505 db_xref InterPro:IPR012301 db_xref InterPro:IPR012302 1400884 1399397 gene locus_tag Alide2_1336 1400884 1399397 CDS product xanthine permease transl_table 11 protein_id gb|AEB83740.1||gnl|jgi|Alide2_1336 note KEGG: dac:Daci_2107 xanthine permease~TIGRFAM: Xanthine permease; Xanthine/uracil permease~PFAM: Xanthine/uracil/vitamin C permease inference protein motif:TFAM:TIGR03173 db_xref GO:0005215 db_xref InterPro:IPR006042 db_xref InterPro:IPR006043 db_xref InterPro:IPR017588 1401235 1402710 gene locus_tag Alide2_1337 1401235 1402710 CDS product methyl-accepting chemotaxis sensory transducer transl_table 11 protein_id gb|AEB83741.1||gnl|jgi|Alide2_1337 note KEGG: dia:Dtpsy_2395 methyl-accepting chemotaxis sensory transducer~PFAM: Chemotaxis methyl-accepting receptor, signalling~SMART: Chemotaxis methyl-accepting receptor, signalling inference protein motif:PFAM:PF00015 db_xref GO:0004871 db_xref InterPro:IPR004089 1403088 1403837 gene locus_tag Alide2_1338 pseudo 1405152 1403899 gene locus_tag Alide2_1339 1405152 1403899 CDS product peptidase dimerization domain protein transl_table 11 protein_id gb|AEB83742.1||gnl|jgi|Alide2_1339 note PFAM: Peptidase M20, dimerisation; Peptidase M20~KEGG: dia:Dtpsy_1035 peptidase dimerisation domain protein inference protein motif:PFAM:PF07687 db_xref GO:0005515 db_xref GO:0016787 db_xref InterPro:IPR002933 db_xref InterPro:IPR011650 1406924 1405149 gene locus_tag Alide2_1340 1406924 1405149 CDS product amidase, hydantoinase/carbamoylase family EC_number 3.5.1.87 transl_table 11 protein_id gb|AEB83743.1||gnl|jgi|Alide2_1340 note TIGRFAM: Amidase, hydantoinase/carbamoylase; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1~KEGG: ajs:Ajs_1115 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase~PFAM: Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase; Peptidase M20 inference protein motif:TFAM:TIGR01879 db_xref GO:0016787 db_xref InterPro:IPR002933 db_xref InterPro:IPR010158 db_xref InterPro:IPR017580 db_xref InterPro:IPR018020 1407948 1406989 gene locus_tag Alide2_1341 1407948 1406989 CDS product urate catabolism protein EC_number 3.5.1.41 transl_table 11 protein_id gb|AEB83744.1||gnl|jgi|Alide2_1341 note TIGRFAM: Putative urate catabolism protein~KEGG: dia:Dtpsy_1037 urate catabolism protein~PFAM: Polysaccharide deacetylase inference protein motif:TFAM:TIGR03212 db_xref InterPro:IPR002509 db_xref InterPro:IPR017625 1408622 1407945 gene locus_tag Alide2_1342 1408622 1407945 CDS product transcriptional regulator, GntR family transl_table 11 protein_id gb|AEB83745.1||gnl|jgi|Alide2_1342 note KEGG: dia:Dtpsy_1038 transcriptional regulator, GntR family~PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR~SMART: HTH transcriptional regulator, GntR; GntR, C-terminal inference protein motif:PFAM:PF07729 db_xref GO:0003700 db_xref InterPro:IPR000524 db_xref InterPro:IPR011711 1409591 1408677 gene locus_tag Alide2_1343 1409591 1408677 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB83746.1||gnl|jgi|Alide2_1343 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: dia:Dtpsy_1039 transcriptional regulator, LysR family inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 1409718 1410785 gene locus_tag Alide2_1344 1409718 1410785 CDS product tartrate dehydrogenase EC_number 4.1.1.73 transl_table 11 protein_id gb|AEB83747.1||gnl|jgi|Alide2_1344 note TIGRFAM: Tartrate dehydrogenase~KEGG: ajs:Ajs_1120 tartrate dehydrogenase~PFAM: Isocitrate/isopropylmalate dehydrogenase inference protein motif:TFAM:TIGR02089 db_xref GO:0009027 db_xref GO:0051287 db_xref InterPro:IPR001804 db_xref InterPro:IPR011829 1410820 1411803 gene locus_tag Alide2_1345 1410820 1411803 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83748.1||gnl|jgi|Alide2_1345 note KEGG: dia:Dtpsy_1041 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_1041 db_xref InterPro:IPR005064 1411882 1413204 gene locus_tag Alide2_1346 1411882 1413204 CDS product Hydroxypyruvate reductase EC_number 1.1.1.81 transl_table 11 protein_id gb|AEB83749.1||gnl|jgi|Alide2_1346 note KEGG: ajs:Ajs_1122 hydroxypyruvate reductase~PFAM: MOFRL domain inference protein motif:PRIAM:1.1.1.81 db_xref InterPro:IPR007835 1414125 1413232 gene locus_tag Alide2_1347 1414125 1413232 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB83750.1||gnl|jgi|Alide2_1347 note PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding~KEGG: axy:AXYL_05357 LysR family regulatory helix-turn-helix protein 171 inference protein motif:PFAM:PF00126 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 1414323 1415651 gene locus_tag Alide2_1348 1414323 1415651 CDS product 2,2-dialkylglycine decarboxylase (pyruvate) EC_number 4.1.1.64 transl_table 11 protein_id gb|AEB83751.1||gnl|jgi|Alide2_1348 note KEGG: axy:AXYL_05358 2,2-dialkylglycine decarboxylase~PFAM: Aminotransferase class-III inference protein motif:PRIAM:4.1.1.64 db_xref InterPro:IPR005814 1415703 1416593 gene locus_tag Alide2_1349 1415703 1416593 CDS product ABC-type transporter, periplasmic subunit family 3 transl_table 11 protein_id gb|AEB83752.1||gnl|jgi|Alide2_1349 note KEGG: lch:Lcho_4024 extracellular solute-binding protein~PFAM: Extracellular solute-binding protein, family 3~SMART: Extracellular solute-binding protein, family 3 inference protein motif:PFAM:PF00497 db_xref GO:0005215 db_xref InterPro:IPR001638 1417601 1416672 gene locus_tag Alide2_1350 1417601 1416672 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB83753.1||gnl|jgi|Alide2_1350 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: dac:Daci_2116 LysR family transcriptional regulator inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 1417712 1419502 gene locus_tag Alide2_1351 1417712 1419502 CDS product glyoxylate carboligase EC_number 4.1.1.47 transl_table 11 protein_id gb|AEB83754.1||gnl|jgi|Alide2_1351 note TIGRFAM: Glyoxylate carboligase~KEGG: dac:Daci_2117 glyoxylate carboligase~PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain; Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, C-terminal TPP-binding inference protein motif:TFAM:TIGR01504 db_xref GO:0009028 db_xref InterPro:IPR006397 db_xref InterPro:IPR011766 db_xref InterPro:IPR012000 db_xref InterPro:IPR012001 1419532 1420332 gene locus_tag Alide2_1352 1419532 1420332 CDS product hydroxypyruvate isomerase EC_number 5.3.1.22 transl_table 11 protein_id gb|AEB83755.1||gnl|jgi|Alide2_1352 note TIGRFAM: Hydroxypyruvate isomerase~KEGG: ctt:CtCNB1_3709 xylose isomerase-like TIM barrel~PFAM: Xylose isomerase, TIM barrel domain inference protein motif:TFAM:TIGR03234 db_xref InterPro:IPR012307 db_xref InterPro:IPR017643 1420380 1421294 gene locus_tag Alide2_1353 1420380 1421294 CDS product 2-hydroxy-3-oxopropionate reductase EC_number 1.1.1.60 transl_table 11 protein_id gb|AEB83756.1||gnl|jgi|Alide2_1353 note TIGRFAM: 2-hydroxy-3-oxopropionate reductase~KEGG: dac:Daci_2119 2-hydroxy-3-oxopropionate reductase~PFAM: 6-phosphogluconate dehydrogenase, NAD-binding inference protein motif:TFAM:TIGR01505 db_xref GO:0008679 db_xref InterPro:IPR006115 db_xref InterPro:IPR006398 1421347 1421700 gene locus_tag Alide2_1354 pseudo 1421787 1422332 gene locus_tag Alide2_1355 1421787 1422332 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83757.1||gnl|jgi|Alide2_1355 note KEGG: dac:Daci_0940 hypothetical protein inference similar to AA sequence:KEGG:Daci_0940 1424119 1422329 gene locus_tag Alide2_1356 1424119 1422329 CDS product gamma-glutamyltransferase EC_number 2.3.2.2 transl_table 11 protein_id gb|AEB83758.1||gnl|jgi|Alide2_1356 note TIGRFAM: Gamma-glutamyltranspeptidase~KEGG: dac:Daci_2120 gamma-glutamyltransferase~PFAM: Gamma-glutamyltranspeptidase inference protein motif:TFAM:TIGR00066 db_xref GO:0003840 db_xref InterPro:IPR000101 1424262 1424612 gene locus_tag Alide2_1357 1424262 1424612 CDS product hydroxyisourate hydrolase EC_number 3.5.2.17 transl_table 11 protein_id gb|AEB83759.1||gnl|jgi|Alide2_1357 note TIGRFAM: Hydroxyisourate hydrolase~KEGG: dia:Dtpsy_1043 hydroxyisourate hydrolase~PFAM: Transthyretin/hydroxyisourate hydrolase inference protein motif:TFAM:TIGR02962 db_xref InterPro:IPR000895 db_xref InterPro:IPR014306 1425298 1424771 gene locus_tag Alide2_1358 1425298 1424771 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83760.1||gnl|jgi|Alide2_1358 note KEGG: dia:Dtpsy_1044 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_1044 1425361 1426194 gene locus_tag Alide2_1359 1425361 1426194 CDS product xanthine dehydrogenase accessory protein XdhC transl_table 11 protein_id gb|AEB83761.1||gnl|jgi|Alide2_1359 note TIGRFAM: Xanthine dehydrogenase accessory protein XdhC~KEGG: ajs:Ajs_1125 hypothetical protein inference protein motif:TFAM:TIGR02964 db_xref InterPro:IPR014308 1426476 1427693 gene locus_tag Alide2_1360 1426476 1427693 CDS product protein of unknown function DUF989 transl_table 11 protein_id gb|AEB83762.1||gnl|jgi|Alide2_1360 note PFAM: Protein of unknown function DUF989~KEGG: ajs:Ajs_1128 hypothetical protein inference protein motif:PFAM:PF06181 db_xref InterPro:IPR010389 1427811 1428377 gene locus_tag Alide2_1361 1427811 1428377 CDS product deoxycytidine triphosphate deaminase EC_number 3.5.4.13 transl_table 11 protein_id gb|AEB83763.1||gnl|jgi|Alide2_1361 note TIGRFAM: Deoxycytidine triphosphate deaminase~KEGG: dia:Dtpsy_1050 deoxycytidine triphosphate deaminase~PFAM: DeoxyUTP pyrophosphatase domain inference protein motif:TFAM:TIGR02274 db_xref GO:0005515 db_xref GO:0008829 db_xref InterPro:IPR008180 db_xref InterPro:IPR011962 1428442 1429305 gene locus_tag Alide2_1362 1428442 1429305 CDS product protein of unknown function zinc metallopeptidase transl_table 11 protein_id gb|AEB83764.1||gnl|jgi|Alide2_1362 note PFAM: Uncharacterised protein family, zinc metallopeptidase putative~KEGG: dia:Dtpsy_1052 protein of unknown function zinc metallopeptidase putative inference protein motif:PFAM:PF04228 db_xref InterPro:IPR007343 1429394 1430836 gene locus_tag Alide2_1363 1429394 1430836 CDS product DEAD/DEAH box helicase domain protein transl_table 11 protein_id gb|AEB83765.1||gnl|jgi|Alide2_1363 note KEGG: dia:Dtpsy_1053 DEAD/DEAH box helicase domain protein~PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal~SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal inference protein motif:PFAM:PF00270 db_xref GO:0003676 db_xref GO:0004386 db_xref GO:0005524 db_xref GO:0008026 db_xref InterPro:IPR001650 db_xref InterPro:IPR011545 db_xref InterPro:IPR014001 1431551 1430937 gene locus_tag Alide2_1364 1431551 1430937 CDS product NosL family protein transl_table 11 protein_id gb|AEB83766.1||gnl|jgi|Alide2_1364 note PFAM: Nitrous oxide reductase accessory protein NosL~KEGG: dia:Dtpsy_1054 hypothetical protein inference protein motif:PFAM:PF05573 db_xref InterPro:IPR008719 1432139 1431603 gene locus_tag Alide2_1365 1432139 1431603 CDS product NosL family protein transl_table 11 protein_id gb|AEB83767.1||gnl|jgi|Alide2_1365 note PFAM: Nitrous oxide reductase accessory protein NosL~KEGG: dia:Dtpsy_1055 NosL family protein inference protein motif:PFAM:PF05573 db_xref InterPro:IPR006311 db_xref InterPro:IPR008719 1432951 1432136 gene locus_tag Alide2_1366 1432951 1432136 CDS product ABC-2 type transporter transl_table 11 protein_id gb|AEB83768.1||gnl|jgi|Alide2_1366 note KEGG: dia:Dtpsy_1056 ABC-2 type transporter inference similar to AA sequence:KEGG:Dtpsy_1056 1433899 1432967 gene locus_tag Alide2_1367 1433899 1432967 CDS product Sulfate-transporting ATPase EC_number 3.6.3.25 transl_table 11 protein_id gb|AEB83769.1||gnl|jgi|Alide2_1367 note PFAM: ABC transporter-like~KEGG: dia:Dtpsy_1057 ABC transporter related~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.25 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 1435142 1433874 gene locus_tag Alide2_1368 1435142 1433874 CDS product parallel beta-helix repeat protein transl_table 11 protein_id gb|AEB83770.1||gnl|jgi|Alide2_1368 note TIGRFAM: Parallel beta-helix repeat-2~PFAM: Periplasmic copper-binding; Domain of unknown function DUF1565~KEGG: dia:Dtpsy_1058 periplasmic copper-binding~SMART: Carbohydrate-binding/sugar hydrolysis domain; Parallel beta-helix repeat inference protein motif:TFAM:TIGR03804 db_xref InterPro:IPR006626 db_xref InterPro:IPR006633 db_xref InterPro:IPR007742 db_xref InterPro:IPR011459 db_xref InterPro:IPR022441 1437760 1435139 gene locus_tag Alide2_1369 1437760 1435139 CDS product nitrous oxide expression regulator, NosR transl_table 11 protein_id gb|AEB83771.1||gnl|jgi|Alide2_1369 note KEGG: dia:Dtpsy_1059 FMN-binding domain protein~PFAM: FMN-binding~SMART: FMN-binding inference protein motif:PFAM:PF04205 db_xref GO:0010181 db_xref InterPro:IPR007329 1439758 1437824 gene locus_tag Alide2_1370 1439758 1437824 CDS product Nitrous-oxide reductase EC_number 1.7.2.4 transl_table 11 protein_id gb|AEB83772.1||gnl|jgi|Alide2_1370 note KEGG: ajs:Ajs_1139 nitrous-oxide reductase~PFAM: Cytochrome c oxidase subunit II C-terminal inference protein motif:PRIAM:1.7.99.6 db_xref InterPro:IPR002429 1440139 1439780 gene locus_tag Alide2_1371 1440139 1439780 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83773.1||gnl|jgi|Alide2_1371 note KEGG: dia:Dtpsy_1061 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_1061 1440367 1440780 gene locus_tag Alide2_1372 1440367 1440780 CDS product cytochrome c class I transl_table 11 protein_id gb|AEB83774.1||gnl|jgi|Alide2_1372 note PFAM: Cytochrome c, class I~KEGG: dia:Dtpsy_1062 cytochrome c class I inference protein motif:PFAM:PF00034 db_xref GO:0005506 db_xref GO:0009055 db_xref GO:0020037 db_xref InterPro:IPR003088 1440800 1441840 gene locus_tag Alide2_1373 1440800 1441840 CDS product ApbE family lipoprotein transl_table 11 protein_id gb|AEB83775.1||gnl|jgi|Alide2_1373 note PFAM: Thiamine synthesis ApbE/UPF0280~KEGG: dia:Dtpsy_1063 ApbE family lipoprotein inference protein motif:PFAM:PF02424 db_xref InterPro:IPR003374 1442787 1441942 gene locus_tag Alide2_1374 1442787 1441942 CDS product bis(5'-nucleosyl)-tetraphosphatase (symmetrical) EC_number 3.6.1.41 transl_table 11 protein_id gb|AEB83776.1||gnl|jgi|Alide2_1374 note TIGRFAM: Bis(5'-nucleosyl)-tetraphosphatase (symmetrical)~KEGG: dia:Dtpsy_1064 diadenosine tetraphosphatase~PFAM: Metallo-dependent phosphatase inference protein motif:TFAM:TIGR00668 db_xref GO:0008803 db_xref InterPro:IPR004617 db_xref InterPro:IPR004843 1443102 1443398 gene locus_tag Alide2_1375 1443102 1443398 CDS product histone family protein nucleoid-structuring protein H-NS transl_table 11 protein_id gb|AEB83777.1||gnl|jgi|Alide2_1375 note PFAM: Histone-like nucleoid-structuring protein H-NS~KEGG: dia:Dtpsy_1065 histone family protein nucleoid-structuring protein H-NS inference protein motif:PFAM:PF00816 db_xref GO:0003677 db_xref InterPro:IPR001801 1443671 1446577 gene locus_tag Alide2_1376 1443671 1446577 CDS product aconitate hydratase 1 EC_number 4.2.1.3 transl_table 11 protein_id gb|AEB83778.1||gnl|jgi|Alide2_1376 note TIGRFAM: Aconitase/iron regulatory protein 2~KEGG: ajs:Ajs_1145 aconitate hydratase~PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; Aconitase A/isopropylmalate dehydratase small subunit, swivel inference protein motif:TFAM:TIGR01341 db_xref GO:0003677 db_xref InterPro:IPR000573 db_xref InterPro:IPR001030 db_xref InterPro:IPR006249 1446600 1447820 gene locus_tag Alide2_1377 1446600 1447820 CDS product FAD dependent oxidoreductase transl_table 11 protein_id gb|AEB83779.1||gnl|jgi|Alide2_1377 note PFAM: FAD dependent oxidoreductase~KEGG: ajs:Ajs_1146 monooxygenase, FAD-binding inference protein motif:PFAM:PF01266 db_xref GO:0016491 db_xref InterPro:IPR006076 1449110 1447872 gene locus_tag Alide2_1378 1449110 1447872 CDS product major facilitator superfamily MFS_1 transl_table 11 protein_id gb|AEB83780.1||gnl|jgi|Alide2_1378 note PFAM: Major facilitator superfamily MFS-1~KEGG: dia:Dtpsy_1068 major facilitator superfamily MFS_1 inference protein motif:PFAM:PF07690 db_xref InterPro:IPR011701 1450341 1449136 gene locus_tag Alide2_1379 1450341 1449136 CDS product major facilitator superfamily MFS_1 transl_table 11 protein_id gb|AEB83781.1||gnl|jgi|Alide2_1379 note PFAM: Major facilitator superfamily MFS-1~KEGG: bpe:BP2600 hypothetical protein inference protein motif:PFAM:PF07690 db_xref InterPro:IPR011701 1451324 1450518 gene locus_tag Alide2_1380 1451324 1450518 CDS product two component transcriptional regulator, LytTR family transl_table 11 protein_id gb|AEB83782.1||gnl|jgi|Alide2_1380 note KEGG: dia:Dtpsy_1069 two component transcriptional regulator, LytTR family~PFAM: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain~SMART: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain inference protein motif:PFAM:PF04397 db_xref GO:0000156 db_xref InterPro:IPR001789 db_xref InterPro:IPR007492 1452348 1451293 gene locus_tag Alide2_1381 1452348 1451293 CDS product signal transduction histidine kinase, LytS transl_table 11 protein_id gb|AEB83783.1||gnl|jgi|Alide2_1381 note PFAM: Signal transduction histidine kinase, internal region; ATPase-like, ATP-binding domain~KEGG: vei:Veis_2283 signal transduction histidine kinase, LytS inference protein motif:PFAM:PF06580 db_xref GO:0000155 db_xref GO:0005524 db_xref InterPro:IPR003594 db_xref InterPro:IPR010559 1452729 1452358 gene locus_tag Alide2_1382 1452729 1452358 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83784.1||gnl|jgi|Alide2_1382 note KEGG: vei:Veis_2284 hypothetical protein inference similar to AA sequence:KEGG:Veis_2284 1453292 1452741 gene locus_tag Alide2_1383 1453292 1452741 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83785.1||gnl|jgi|Alide2_1383 note KEGG: xtr:100495621 UPF0065 protein in clcB-clcD intergenic region-like inference similar to AA sequence:KEGG:100495621 1453479 1454303 gene locus_tag Alide2_1384 1453479 1454303 CDS product Undecaprenyl-diphosphatase transl_table 11 protein_id gb|AEB83786.1||gnl|jgi|Alide2_1384 note TIGRFAM: Bacitracin resistance protein BacA~HAMAP: Bacitracin resistance protein BacA~KEGG: ajs:Ajs_1152 undecaprenyl pyrophosphate phosphatase~PFAM: Bacitracin resistance protein BacA inference protein motif:HAMAP:MF_01006 db_xref InterPro:IPR003824 1455131 1454319 gene locus_tag Alide2_1385 1455131 1454319 CDS product alpha/beta hydrolase fold protein transl_table 11 protein_id gb|AEB83787.1||gnl|jgi|Alide2_1385 note PFAM: Alpha/beta hydrolase fold-1~KEGG: dia:Dtpsy_1074 alpha/beta hydrolase fold protein inference protein motif:PFAM:PF00561 db_xref InterPro:IPR000073 1455443 1456867 gene locus_tag Alide2_1386 1455443 1456867 CDS product efflux transporter, RND family, MFP subunit transl_table 11 protein_id gb|AEB83788.1||gnl|jgi|Alide2_1386 note KEGG: dac:Daci_2256 RND family efflux transporter MFP subunit~TIGRFAM: Secretion protein HlyD~PFAM: Secretion protein HlyD; Uncharacterised protein domain Spy-rel inference protein motif:TFAM:TIGR01730 db_xref GO:0008565 db_xref InterPro:IPR006143 db_xref InterPro:IPR012899 1456904 1460020 gene locus_tag Alide2_1387 1456904 1460020 CDS product acriflavin resistance protein transl_table 11 protein_id gb|AEB83789.1||gnl|jgi|Alide2_1387 note PFAM: Acriflavin resistance protein~KEGG: dac:Daci_2257 acriflavin resistance protein inference protein motif:PFAM:PF00873 db_xref GO:0005215 db_xref InterPro:IPR001036 1460141 1463266 gene locus_tag Alide2_1388 1460141 1463266 CDS product acriflavin resistance protein transl_table 11 protein_id gb|AEB83790.1||gnl|jgi|Alide2_1388 note PFAM: Acriflavin resistance protein~KEGG: dac:Daci_2258 acriflavin resistance protein inference protein motif:PFAM:PF00873 db_xref GO:0005215 db_xref InterPro:IPR001036 1463269 1464681 gene locus_tag Alide2_1389 1463269 1464681 CDS product RND efflux system, outer membrane lipoprotein, NodT family transl_table 11 protein_id gb|AEB83791.1||gnl|jgi|Alide2_1389 note KEGG: dac:Daci_2259 RND efflux system outer membrane lipoprotein~TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT~PFAM: Outer membrane efflux protein inference protein motif:TFAM:TIGR01845 db_xref GO:0005215 db_xref GO:0008289 db_xref InterPro:IPR003423 db_xref InterPro:IPR010131 1467306 1464694 gene locus_tag Alide2_1390 1467306 1464694 CDS product DNA mismatch repair protein mutS transl_table 11 protein_id gb|AEB83792.1||gnl|jgi|Alide2_1390 note KEGG: dia:Dtpsy_1076 DNA mismatch repair protein MutS~PFAM: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS-like, N-terminal; DNA mismatch repair protein MutS, connector; DNA mismatch repair protein MutS, core; DNA mismatch repair protein MutS, clamp~manually curated~TIGRFAM: DNA mismatch repair protein MutS, type 1~SMART: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS, core~HAMAP: DNA mismatch repair protein MutS, type 1 inference protein motif:HAMAP:MF_00096 db_xref InterPro:IPR000432 db_xref InterPro:IPR005748 db_xref InterPro:IPR007695 db_xref InterPro:IPR007696 db_xref InterPro:IPR007860 db_xref InterPro:IPR007861 1468303 1467629 gene locus_tag Alide2_1391 1468303 1467629 CDS product regulatory protein TetR transl_table 11 protein_id gb|AEB83793.1||gnl|jgi|Alide2_1391 note PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal~KEGG: bph:Bphy_3516 TetR family transcriptional regulator inference protein motif:PFAM:PF00440 db_xref GO:0003700 db_xref InterPro:IPR001647 1468421 1469257 gene locus_tag Alide2_1392 1468421 1469257 CDS product Ureidoglycolate lyase EC_number 4.3.2.3 transl_table 11 protein_id gb|AEB83794.1||gnl|jgi|Alide2_1392 note KEGG: bja:bll6360 putative bifunctional enzyme 2-hydroxyhepta-2,4-diene-1,7-dioatesomerase 5-carboxymethyl-2-oxo-hex-3-ene-1,7-dioatedecarboxylase protein~PFAM: Fumarylacetoacetase, C-terminal-like inference protein motif:PRIAM:4.3.2.3 db_xref InterPro:IPR002529 1469339 1470274 gene locus_tag Alide2_1393 pseudo 1470288 1470753 gene locus_tag Alide2_1394 pseudo 1470832 1471062 gene locus_tag Alide2_1395 1470832 1471062 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83795.1||gnl|jgi|Alide2_1395 inference ab initio prediction:Prodigal:1.4 1472084 1471098 gene locus_tag Alide2_1396 1472084 1471098 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83796.1||gnl|jgi|Alide2_1396 note KEGG: dac:Daci_5118 hypothetical protein inference similar to AA sequence:KEGG:Daci_5118 db_xref InterPro:IPR005064 1473319 1472123 gene locus_tag Alide2_1397 1473319 1472123 CDS product L-lactate dehydrogenase (cytochrome) EC_number 1.1.2.3 transl_table 11 protein_id gb|AEB83797.1||gnl|jgi|Alide2_1397 note KEGG: dac:Daci_0789 FMN-dependent alpha-hydroxy acid dehydrogenase~PFAM: FMN-dependent dehydrogenase inference protein motif:PRIAM:1.1.2.3 db_xref InterPro:IPR000262 1473432 1474346 gene locus_tag Alide2_1398 1473432 1474346 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB83798.1||gnl|jgi|Alide2_1398 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: dac:Daci_0788 LysR family transcriptional regulator inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 1475963 1474383 gene locus_tag Alide2_1399 1475963 1474383 CDS product Alkaline phosphatase EC_number 3.1.3.1 transl_table 11 protein_id gb|AEB83799.1||gnl|jgi|Alide2_1399 note KEGG: dia:Dtpsy_1077 alkaline phosphatase~PFAM: Alkaline phosphatase D-related inference protein motif:PRIAM:3.1.3.1 db_xref InterPro:IPR018946 1477570 1475990 gene locus_tag Alide2_1400 1477570 1475990 CDS product diguanylate cyclase transl_table 11 protein_id gb|AEB83800.1||gnl|jgi|Alide2_1400 note SMART: Diguanylate cyclase, predicted~TIGRFAM: Diguanylate cyclase, predicted~KEGG: dia:Dtpsy_1078 diguanylate cyclase~PFAM: Diguanylate cyclase, predicted inference protein motif:TFAM:TIGR00254 db_xref InterPro:IPR000160 1477636 1478457 gene locus_tag Alide2_1401 1477636 1478457 CDS product stationary-phase survival protein SurE EC_number 3.1.3.6 transl_table 11 protein_id gb|AEB83801.1||gnl|jgi|Alide2_1401 note TIGRFAM: Survival protein SurE-like phosphatase/nucleotidase~KEGG: ajs:Ajs_1160 stationary phase survival protein SurE~PFAM: Survival protein SurE-like phosphatase/nucleotidase inference protein motif:TFAM:TIGR00087 db_xref GO:0016787 db_xref InterPro:IPR002828 1478457 1479230 gene locus_tag Alide2_1402 1478457 1479230 CDS product protein-L-isoaspartate O-methyltransferase EC_number 2.1.1.77 transl_table 11 protein_id gb|AEB83802.1||gnl|jgi|Alide2_1402 note TIGRFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase~KEGG: dia:Dtpsy_1081 protein-L-isoaspartate O-methyltransferase~PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase inference protein motif:TFAM:TIGR00080 db_xref GO:0004719 db_xref InterPro:IPR000682 1479242 1480144 gene locus_tag Alide2_1403 1479242 1480144 CDS product Peptidase M23 transl_table 11 protein_id gb|AEB83803.1||gnl|jgi|Alide2_1403 note KEGG: dia:Dtpsy_1082 peptidase M23~PFAM: Peptidase M23; Peptidoglycan-binding lysin domain~SMART: Peptidoglycan-binding Lysin subgroup inference protein motif:PFAM:PF01551 db_xref InterPro:IPR002482 db_xref InterPro:IPR016047 db_xref InterPro:IPR018392 1480141 1481151 gene locus_tag Alide2_1404 1480141 1481151 CDS product pseudouridine synthase, RluA family transl_table 11 protein_id gb|AEB83804.1||gnl|jgi|Alide2_1404 note TIGRFAM: Pseudouridine synthase, RluC/RluD~PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4~KEGG: dia:Dtpsy_1083 pseudouridine synthase, RluA family~SMART: RNA-binding S4 inference protein motif:TFAM:TIGR00005 db_xref GO:0003723 db_xref GO:0009982 db_xref InterPro:IPR002942 db_xref InterPro:IPR006145 db_xref InterPro:IPR006225 1481320 1481988 gene locus_tag Alide2_1405 1481320 1481988 CDS product chromosome segregation and condensation protein, ScpB transl_table 11 protein_id gb|AEB83805.1||gnl|jgi|Alide2_1405 note KEGG: dia:Dtpsy_1084 chromosome segregation and condensation protein, ScpB~TIGRFAM: Chromosome segregation/condensation protein ScpB, prokaryote~PFAM: Chromosome segregation/condensation protein ScpB, prokaryote inference protein motif:TFAM:TIGR00281 db_xref InterPro:IPR005234 1481990 1483345 gene locus_tag Alide2_1406 1481990 1483345 CDS product pseudouridine synthase Rsu transl_table 11 protein_id gb|AEB83806.1||gnl|jgi|Alide2_1406 note TIGRFAM: Pseudouridine synthase, RsuA/RluB/E/F~PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4~KEGG: dia:Dtpsy_1085 pseudouridine synthase~SMART: RNA-binding S4 inference protein motif:TFAM:TIGR00093 db_xref GO:0003723 db_xref GO:0016866 db_xref InterPro:IPR000748 db_xref InterPro:IPR002942 db_xref InterPro:IPR006145 1483424 1483849 gene locus_tag Alide2_1407 1483424 1483849 CDS product Nucleoside-diphosphate kinase EC_number 2.7.4.6 transl_table 11 protein_id gb|AEB83807.1||gnl|jgi|Alide2_1407 note PFAM: Nucleoside diphosphate kinase~KEGG: ajs:Ajs_1166 nucleoside diphosphate kinase~SMART: Nucleoside diphosphate kinase inference protein motif:PRIAM:2.7.4.6 db_xref InterPro:IPR001564 1483937 1485061 gene locus_tag Alide2_1408 1483937 1485061 CDS product Ribosomal RNA large subunit methyltransferase N transl_table 11 protein_id gb|AEB83808.1||gnl|jgi|Alide2_1408 note TIGRFAM: Ribosomal RNA large subunit methyltransferase RlmN;~HAMAP: Ribosomal RNA large subunit methyltransferase RlmN;~KEGG: dia:Dtpsy_1087 radical SAM enzyme, Cfr family~PFAM: Radical SAM inference protein motif:HAMAP:MF_01849 db_xref InterPro:IPR004383 db_xref InterPro:IPR007197 1485083 1485910 gene locus_tag Alide2_1409 1485083 1485910 CDS product type IV pilus biogenesis/stability protein PilW transl_table 11 protein_id gb|AEB83809.1||gnl|jgi|Alide2_1409 note KEGG: dia:Dtpsy_1088 type IV pilus biogenesis/stability protein PilW~TIGRFAM: Pilus biogenesis/stability type IV, PilW~PFAM: Tetratricopeptide TPR-1 inference protein motif:TFAM:TIGR02521 db_xref InterPro:IPR001440 db_xref InterPro:IPR013360 db_xref InterPro:IPR019734 1485903 1486799 gene locus_tag Alide2_1410 1485903 1486799 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83810.1||gnl|jgi|Alide2_1410 note KEGG: dia:Dtpsy_1089 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_1089 1486800 1488074 gene locus_tag Alide2_1411 1486800 1488074 CDS product 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase transl_table 11 protein_id gb|AEB83811.1||gnl|jgi|Alide2_1411 note KEGG: dia:Dtpsy_1090 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase~TIGRFAM: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type~PFAM: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type inference protein motif:TFAM:TIGR00612 db_xref GO:0046429 db_xref InterPro:IPR004588 1488158 1489447 gene locus_tag Alide2_1412 1488158 1489447 CDS product Histidyl-tRNA synthetase EC_number 6.1.1.21 transl_table 11 protein_id gb|AEB83812.1||gnl|jgi|Alide2_1412 note PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; Anticodon-binding~TIGRFAM: Histidyl-tRNA synthetase, class IIa, subgroup~HAMAP: Histidyl-tRNA synthetase, class IIa, subgroup~KEGG: dia:Dtpsy_1091 histidyl-tRNA synthetase inference protein motif:HAMAP:MF_00127 db_xref InterPro:IPR002314 db_xref InterPro:IPR004154 db_xref InterPro:IPR015807 1489463 1490143 gene locus_tag Alide2_1413 1489463 1490143 CDS product Protein of unknown function DUF2133 transl_table 11 protein_id gb|AEB83813.1||gnl|jgi|Alide2_1413 note PFAM: Protein of unknown function DUF2133~KEGG: dia:Dtpsy_1092 hypothetical protein inference protein motif:PFAM:PF09976 db_xref InterPro:IPR018704 1490140 1491288 gene locus_tag Alide2_1414 1490140 1491288 CDS product outer membrane assembly lipoprotein YfgL transl_table 11 protein_id gb|AEB83814.1||gnl|jgi|Alide2_1414 note KEGG: dia:Dtpsy_1093 outer membrane assembly lipoprotein YfgL~TIGRFAM: Outer membrane assembly lipoprotein YfgL~PFAM: Pyrrolo-quinoline quinone repeat inference protein motif:TFAM:TIGR03300 db_xref InterPro:IPR002372 db_xref InterPro:IPR017687 db_xref InterPro:IPR018391 1491307 1492650 gene locus_tag Alide2_1415 1491307 1492650 CDS product ribosome-associated GTPase EngA transl_table 11 protein_id gb|AEB83815.1||gnl|jgi|Alide2_1415 note KEGG: dia:Dtpsy_1094 GTP-binding protein EngA~TIGRFAM: GTP-binding, EngA; Small GTP-binding protein~PFAM: GTP-binding protein, HSR1-related inference protein motif:TFAM:TIGR03594 db_xref GO:0005525 db_xref InterPro:IPR002917 db_xref InterPro:IPR005225 db_xref InterPro:IPR016484 1492674 1492976 gene locus_tag Alide2_1416 1492674 1492976 CDS product RNA chaperone Hfq transl_table 11 protein_id gb|AEB83816.1||gnl|jgi|Alide2_1416 note KEGG: dia:Dtpsy_1095 RNA chaperone Hfq~TIGRFAM: Host factor Hfq~PFAM: Like-Sm ribonucleoprotein (LSM) domain inference protein motif:TFAM:TIGR02383 db_xref GO:0003723 db_xref InterPro:IPR001163 db_xref InterPro:IPR005001 1493041 1494219 gene locus_tag Alide2_1417 1493041 1494219 CDS product GTP-binding proten HflX transl_table 11 protein_id gb|AEB83817.1||gnl|jgi|Alide2_1417 note KEGG: ajs:Ajs_1176 small GTP-binding protein~TIGRFAM: GTP-binding protein, HflX~PFAM: GTP-binding protein, HSR1-related inference protein motif:TFAM:TIGR03156 db_xref InterPro:IPR002917 db_xref InterPro:IPR016496 1494272 1495648 gene locus_tag Alide2_1418 1494272 1495648 CDS product HflK protein transl_table 11 protein_id gb|AEB83818.1||gnl|jgi|Alide2_1418 note TIGRFAM: HflK~PFAM: Band 7 protein; Protein HflK, N-terminal~KEGG: dia:Dtpsy_1097 HflK protein~SMART: Band 7 protein inference protein motif:TFAM:TIGR01933 db_xref GO:0005515 db_xref InterPro:IPR001107 db_xref InterPro:IPR010201 db_xref InterPro:IPR020980 1495658 1496572 gene locus_tag Alide2_1419 1495658 1496572 CDS product HflC protein transl_table 11 protein_id gb|AEB83819.1||gnl|jgi|Alide2_1419 note TIGRFAM: HflC~PFAM: Band 7 protein~KEGG: ajs:Ajs_1178 HflC protein~SMART: Band 7 protein inference protein motif:TFAM:TIGR01932 db_xref GO:0005515 db_xref GO:0008233 db_xref InterPro:IPR001107 db_xref InterPro:IPR010200 1496601 1496789 gene locus_tag Alide2_1420 1496601 1496789 CDS product Protein of unknown function DUF2065 transl_table 11 protein_id gb|AEB83820.1||gnl|jgi|Alide2_1420 note PFAM: Protein of unknown function DUF2065~KEGG: ajs:Ajs_1179 hypothetical protein inference protein motif:PFAM:PF09838 db_xref InterPro:IPR019201 1496864 1498012 gene locus_tag Alide2_1421 1496864 1498012 CDS product histidyl-tRNA synthetase 2 transl_table 11 protein_id gb|AEB83821.1||gnl|jgi|Alide2_1421 note TIGRFAM: Histidyl-tRNA synthetase, class IIa, putative~KEGG: ajs:Ajs_1180 tRNA synthetase, class II (G, H, P and S) inference protein motif:TFAM:TIGR00443 db_xref InterPro:IPR004517 1498040 1499416 gene locus_tag Alide2_1422 1498040 1499416 CDS product adenylosuccinate synthetase EC_number 6.3.4.4 transl_table 11 protein_id gb|AEB83822.1||gnl|jgi|Alide2_1422 note SMART: Adenylosuccinate synthetase~TIGRFAM: Adenylosuccinate synthetase~KEGG: dia:Dtpsy_1101 adenylosuccinate synthetase~PFAM: Adenylosuccinate synthetase inference protein motif:TFAM:TIGR00184 db_xref GO:0000287 db_xref GO:0004019 db_xref GO:0005525 db_xref InterPro:IPR001114 1499488 1500012 gene locus_tag Alide2_1423 1499488 1500012 CDS product phosphoribosyltransferase transl_table 11 protein_id gb|AEB83823.1||gnl|jgi|Alide2_1423 note PFAM: Phosphoribosyltransferase~KEGG: ajs:Ajs_1182 phosphoribosyltransferase inference protein motif:PFAM:PF00156 db_xref InterPro:IPR000836 1500507 1502023 gene locus_tag Alide2_R0015 1500507 1502023 rRNA product 16S ribosomal RNA note RNAmmer 1.2, Lagesen et al, Nucleic Acids Res. Apr 22, 2007 1502128 1502204 gene locus_tag Alide2_R0016 note tRNA-Ile1 1502128 1502204 tRNA product tRNA-Ile 1502235 1502310 gene locus_tag Alide2_R0017 note tRNA-Ala1 1502235 1502310 tRNA product tRNA-Ala 1502672 1505548 gene locus_tag Alide2_R0018 1502672 1505548 rRNA product 23S ribosomal RNA note RNAmmer 1.2, Lagesen et al, Nucleic Acids Res. Apr 22, 2007 1505665 1505777 gene locus_tag Alide2_R0019 1505665 1505777 rRNA product 5S ribosomal RNA note 5S ribosomal RNA as predicted by Rfam (RF00001), score 84.63 1505864 1506601 gene locus_tag Alide2_1424 1505864 1506601 CDS product pseudouridine synthase Rsu transl_table 11 protein_id gb|AEB83824.1||gnl|jgi|Alide2_1424 note KEGG: ajs:Ajs_1183 ribosomal small subunit pseudouridine synthase A~TIGRFAM: Pseudouridine synthase, RsuA/RluB/E/F~PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F inference protein motif:TFAM:TIGR00093 db_xref GO:0003723 db_xref GO:0016866 db_xref InterPro:IPR000748 db_xref InterPro:IPR006145 1506709 1507674 gene locus_tag Alide2_1425 1506709 1507674 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83825.1||gnl|jgi|Alide2_1425 note KEGG: dia:Dtpsy_1104 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_1104 1507688 1508491 gene locus_tag Alide2_1426 1507688 1508491 CDS product polysaccharide deacetylase transl_table 11 protein_id gb|AEB83826.1||gnl|jgi|Alide2_1426 note KEGG: dia:Dtpsy_1105 polysaccharide deacetylase~manually curated~PFAM: Polysaccharide deacetylase inference protein motif:PFAM:PF01522 db_xref GO:0005525 db_xref InterPro:IPR002509 1508533 1509531 gene locus_tag Alide2_1427 1508533 1509531 CDS product fatty acid hydroxylase transl_table 11 protein_id gb|AEB83827.1||gnl|jgi|Alide2_1427 note PFAM: Fatty acid hydroxylase~KEGG: dia:Dtpsy_1106 fatty acid hydroxylase inference protein motif:PFAM:PF04116 db_xref GO:0005506 db_xref GO:0016491 db_xref InterPro:IPR006694 1509559 1510452 gene locus_tag Alide2_1428 1509559 1510452 CDS product protein of unknown function DUF540 transl_table 11 protein_id gb|AEB83828.1||gnl|jgi|Alide2_1428 note PFAM: Uncharacterised protein family CysZ~KEGG: dia:Dtpsy_1107 putative transmembrane protein inference protein motif:PFAM:PF04401 db_xref InterPro:IPR007496 1510449 1511270 gene locus_tag Alide2_1429 1510449 1511270 CDS product molybdopterin binding domain protein transl_table 11 protein_id gb|AEB83829.1||gnl|jgi|Alide2_1429 note KEGG: ajs:Ajs_1188 molybdopterin binding domain-containing protein~PFAM: Molybdopterin binding~SMART: Molybdopterin binding inference protein motif:PFAM:PF00994 db_xref InterPro:IPR001453 1511442 1512857 gene locus_tag Alide2_1430 1511442 1512857 CDS product glutamine synthetase, type I EC_number 6.3.1.2 transl_table 11 protein_id gb|AEB83830.1||gnl|jgi|Alide2_1430 note TIGRFAM: Glutamine synthetase type I~KEGG: aav:Aave_1442 L-glutamine synthetase~PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp inference protein motif:TFAM:TIGR00653 db_xref GO:0004356 db_xref InterPro:IPR004809 db_xref InterPro:IPR008146 db_xref InterPro:IPR008147 1513031 1513519 gene locus_tag Alide2_1431 1513031 1513519 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83831.1||gnl|jgi|Alide2_1431 note KEGG: dia:Dtpsy_1110 putative signal peptide protein inference similar to AA sequence:KEGG:Dtpsy_1110 1513544 1514614 gene locus_tag Alide2_1432 1513544 1514614 CDS product signal transduction histidine kinase, nitrogen specific, NtrB transl_table 11 protein_id gb|AEB83832.1||gnl|jgi|Alide2_1432 note manually curated~PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain~KEGG: dia:Dtpsy_1111 signal transduction histidine kinase, nitrogen specific, NtrB~SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain inference protein motif:PFAM:PF02518 db_xref GO:0000155 db_xref GO:0005524 db_xref InterPro:IPR003594 db_xref InterPro:IPR003661 1514656 1516095 gene locus_tag Alide2_1433 1514656 1516095 CDS product nitrogen metabolism transcriptional regulator, NtrC, Fis Family transl_table 11 protein_id gb|AEB83833.1||gnl|jgi|Alide2_1433 note TIGRFAM: Signal transduction response regulator, nitrogen regulation NR(I)~PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver domain; Helix-turn-helix, Fis-type~KEGG: dia:Dtpsy_1112 nitrogen metabolism transcriptional regulator, NtrC, fis family~SMART: Signal transduction response regulator, receiver domain; ATPase, AAA+ type, core inference protein motif:TFAM:TIGR01818 db_xref GO:0000156 db_xref GO:0003677 db_xref GO:0005524 db_xref InterPro:IPR001789 db_xref InterPro:IPR002078 db_xref InterPro:IPR002197 db_xref InterPro:IPR003593 db_xref InterPro:IPR010114 1517196 1516420 gene locus_tag Alide2_1434 1517196 1516420 CDS product exodeoxyribonuclease III Xth EC_number 3.1.11.2 transl_table 11 protein_id gb|AEB83834.1||gnl|jgi|Alide2_1434 note TIGRFAM: Exodeoxyribonuclease III xth; AP endonuclease, family 1~KEGG: dia:Dtpsy_1114 exodeoxyribonuclease III Xth~PFAM: Endonuclease/exonuclease/phosphatase inference protein motif:TFAM:TIGR00633 db_xref GO:0003677 db_xref GO:0004518 db_xref GO:0004519 db_xref InterPro:IPR000097 db_xref InterPro:IPR004808 db_xref InterPro:IPR005135 1517493 1517203 gene locus_tag Alide2_1435 1517493 1517203 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83835.1||gnl|jgi|Alide2_1435 note KEGG: shn:Shewana3_1258 XRE family transcriptional regulator inference similar to AA sequence:KEGG:Shewana3_1258 1517706 1519406 gene locus_tag Alide2_1436 1517706 1519406 CDS product potassium-transporting ATPase, A subunit EC_number 3.6.3.12 transl_table 11 protein_id gb|AEB83836.1||gnl|jgi|Alide2_1436 note TIGRFAM: ATPase, K+ transporting, A subunit~KEGG: pap:PSPA7_3712 potassium-transporting ATPase subunit A~PFAM: ATPase, K+ transporting, A subunit inference protein motif:TFAM:TIGR00680 db_xref GO:0008556 db_xref InterPro:IPR004623 1519418 1521442 gene locus_tag Alide2_1437 1519418 1521442 CDS product Potassium-transporting ATPase B chain EC_number 3.6.3.4 transl_table 11 protein_id gb|AEB83837.1||gnl|jgi|Alide2_1437 note PFAM: ATPase, P-type, ATPase-associated domain; Haloacid dehalogenase-like hydrolase~TIGRFAM: Potassium-transporting ATPase, B chain; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter~HAMAP: Potassium-transporting ATPase, B chain~KEGG: tgr:Tgr7_1888 potassium-transporting ATPase subunit B inference protein motif:HAMAP:MF_00285 db_xref InterPro:IPR001757 db_xref InterPro:IPR005834 db_xref InterPro:IPR006391 db_xref InterPro:IPR008250 1521456 1522088 gene locus_tag Alide2_1438 1521456 1522088 CDS product potassium-transporting ATPase, C subunit EC_number 3.6.3.12 transl_table 11 protein_id gb|AEB83838.1||gnl|jgi|Alide2_1438 note TIGRFAM: Potassium transporting ATPase, C subunit~KEGG: pap:PSPA7_3714 K+-transporting ATPase subunit C~PFAM: Potassium transporting ATPase, C subunit inference protein motif:TFAM:TIGR00681 db_xref GO:0008556 db_xref InterPro:IPR003820 1522104 1524833 gene locus_tag Alide2_1439 1522104 1524833 CDS product Osmosensitive K channel His kinase sensor transl_table 11 protein_id gb|AEB83839.1||gnl|jgi|Alide2_1439 note KEGG: tgr:Tgr7_1885 sensor protein KdpD~PFAM: Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal; ATPase-like, ATP-binding domain; UspA; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain~SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; GAF inference protein motif:PFAM:PF02702 db_xref GO:0000155 db_xref GO:0004673 db_xref GO:0005524 db_xref InterPro:IPR003018 db_xref InterPro:IPR003594 db_xref InterPro:IPR003661 db_xref InterPro:IPR003852 db_xref InterPro:IPR006016 1524838 1525548 gene locus_tag Alide2_1440 1524838 1525548 CDS product two component transcriptional regulator, winged helix family transl_table 11 protein_id gb|AEB83840.1||gnl|jgi|Alide2_1440 note KEGG: tgr:Tgr7_1884 response regulator receiver protein~PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal~SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal inference protein motif:PFAM:PF00072 db_xref GO:0000156 db_xref GO:0003677 db_xref InterPro:IPR001789 db_xref InterPro:IPR001867 1525625 1526002 gene locus_tag Alide2_1441 1525625 1526002 CDS product putative transposase-related protein transl_table 11 protein_id gb|AEB83841.1||gnl|jgi|Alide2_1441 note KEGG: rle:pRL110581 putative transposase-related protein inference similar to AA sequence:KEGG:pRL110581 1525999 1526385 gene locus_tag Alide2_1442 1525999 1526385 CDS product transposase IS4 family protein transl_table 11 protein_id gb|AEB83842.1||gnl|jgi|Alide2_1442 note PFAM: Transposase, IS4-like~KEGG: nwi:Nwi_1015 transposase, IS4 inference protein motif:PFAM:PF01609 db_xref GO:0003677 db_xref GO:0004803 db_xref InterPro:IPR002559 1526573 1527244 gene locus_tag Alide2_1443 1526573 1527244 CDS product Protein of unknown function DUF3348 transl_table 11 protein_id gb|AEB83843.1||gnl|jgi|Alide2_1443 note PFAM: Protein of unknown function DUF3348~KEGG: vap:Vapar_3241 hypothetical protein inference protein motif:PFAM:PF11828 db_xref InterPro:IPR021783 1527241 1529979 gene locus_tag Alide2_1444 1527241 1529979 CDS product OmpA/MotB domain protein transl_table 11 protein_id gb|AEB83844.1||gnl|jgi|Alide2_1444 note PFAM: Outer membrane protein, OmpA/MotB, C-terminal; Domain of unknown function DUF802~KEGG: vap:Vapar_3240 protein of unknown function DUF802 inference protein motif:PFAM:PF00691 db_xref InterPro:IPR006665 db_xref InterPro:IPR008520 1530014 1530545 gene locus_tag Alide2_1445 pseudo 1531005 1530511 gene locus_tag Alide2_1446 1531005 1530511 CDS product Dihydrofolate reductase EC_number 1.5.1.3 transl_table 11 protein_id gb|AEB83845.1||gnl|jgi|Alide2_1446 note KEGG: dia:Dtpsy_1115 dihydrofolate reductase~PFAM: Dihydrofolate reductase domain inference protein motif:PRIAM:1.5.1.3 db_xref InterPro:IPR001796 1531817 1531002 gene locus_tag Alide2_1447 1531817 1531002 CDS product thymidylate synthase EC_number 2.1.1.45 transl_table 11 protein_id gb|AEB83846.1||gnl|jgi|Alide2_1447 note TIGRFAM: Thymidylate synthase~KEGG: ajs:Ajs_1197 thymidylate synthase~PFAM: Thymidylate synthase inference protein motif:TFAM:TIGR03284 db_xref GO:0004799 db_xref InterPro:IPR000398 1533294 1531870 gene locus_tag Alide2_1448 1533294 1531870 CDS product D-lactate dehydrogenase (cytochrome) EC_number 1.1.2.4 transl_table 11 protein_id gb|AEB83847.1||gnl|jgi|Alide2_1448 note KEGG: dia:Dtpsy_1117 FAD linked oxidase domain protein~PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal inference protein motif:PRIAM:1.1.2.4 db_xref InterPro:IPR004113 db_xref InterPro:IPR006094 1533719 1533291 gene locus_tag Alide2_1449 1533719 1533291 CDS product Protein of unknown function DUF2069, membrane transl_table 11 protein_id gb|AEB83848.1||gnl|jgi|Alide2_1449 note PFAM: Protein of unknown function DUF2069, membrane~KEGG: dia:Dtpsy_1118 membrane protein-like protein inference protein motif:PFAM:PF09842 db_xref InterPro:IPR018643 1533741 1534994 gene locus_tag Alide2_1450 1533741 1534994 CDS product ribonuclease BN transl_table 11 protein_id gb|AEB83849.1||gnl|jgi|Alide2_1450 note KEGG: dia:Dtpsy_1119 ribonuclease BN~TIGRFAM: Ribonuclease BN~PFAM: Ribonuclease BN-related inference protein motif:TFAM:TIGR00765 db_xref GO:0004540 db_xref InterPro:IPR004664 db_xref InterPro:IPR017039 1537220 1535196 gene locus_tag Alide2_1451 1537220 1535196 CDS product Protein of unknown function DUF2868 transl_table 11 protein_id gb|AEB83850.1||gnl|jgi|Alide2_1451 note PFAM: Protein of unknown function DUF2868; Protein of unknown function DUF3482~KEGG: pna:Pnap_2063 hypothetical protein inference protein motif:PFAM:PF11067 db_xref InterPro:IPR021296 db_xref InterPro:IPR021871 1538526 1537234 gene locus_tag Alide2_1452 1538526 1537234 CDS product squalene-associated FAD-dependent desaturase transl_table 11 protein_id gb|AEB83851.1||gnl|jgi|Alide2_1452 note KEGG: ajs:Ajs_1201 amine oxidase~TIGRFAM: Squalene-associated FAD-dependent desaturase~PFAM: Amine oxidase inference protein motif:TFAM:TIGR03467 db_xref InterPro:IPR002937 db_xref InterPro:IPR017830 1538709 1540343 gene locus_tag Alide2_1453 1538709 1540343 CDS product methyl-accepting chemotaxis sensory transducer transl_table 11 protein_id gb|AEB83852.1||gnl|jgi|Alide2_1453 note KEGG: rfr:Rfer_3023 methyl-accepting chemotaxis sensory transducer~PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain~SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain inference protein motif:PFAM:PF00015 db_xref GO:0004871 db_xref InterPro:IPR003660 db_xref InterPro:IPR004089 1541214 1540375 gene locus_tag Alide2_1454 1541214 1540375 CDS product squalene synthase HpnD EC_number 2.5.1.32 transl_table 11 protein_id gb|AEB83853.1||gnl|jgi|Alide2_1454 note TIGRFAM: Squalene/phytoene synthase HpnD~KEGG: dia:Dtpsy_1121 squalene synthase HpnD~PFAM: Squalene/phytoene synthase inference protein motif:TFAM:TIGR03465 db_xref GO:0016767 db_xref InterPro:IPR002060 db_xref InterPro:IPR017828 1542206 1541328 gene locus_tag Alide2_1455 1542206 1541328 CDS product squalene synthase HpnC transl_table 11 protein_id gb|AEB83854.1||gnl|jgi|Alide2_1455 note KEGG: dia:Dtpsy_1124 squalene synthase HpnC~TIGRFAM: Squalene synthase HpnC~PFAM: Squalene/phytoene synthase inference protein motif:TFAM:TIGR03464 db_xref InterPro:IPR002060 db_xref InterPro:IPR017827 1542299 1543570 gene locus_tag Alide2_1456 1542299 1543570 CDS product efflux transporter, RND family, MFP subunit transl_table 11 protein_id gb|AEB83855.1||gnl|jgi|Alide2_1456 note KEGG: dia:Dtpsy_1125 efflux transporter, RND family, MFP subunit~TIGRFAM: Secretion protein HlyD~PFAM: Secretion protein HlyD inference protein motif:TFAM:TIGR01730 db_xref GO:0008565 db_xref InterPro:IPR006143 1543580 1546699 gene locus_tag Alide2_1457 1543580 1546699 CDS product acriflavin resistance protein transl_table 11 protein_id gb|AEB83856.1||gnl|jgi|Alide2_1457 note PFAM: Acriflavin resistance protein~KEGG: ajs:Ajs_1207 acriflavin resistance protein inference protein motif:PFAM:PF00873 db_xref GO:0005215 db_xref InterPro:IPR001036 1546785 1546871 gene locus_tag Alide2_R0020 note tRNA-Leu1 1546785 1546871 tRNA product tRNA-Leu 1546924 1548234 gene locus_tag Alide2_1458 1546924 1548234 CDS product Trigger factor transl_table 11 protein_id gb|AEB83857.1||gnl|jgi|Alide2_1458 note TIGRFAM: Trigger factor~HAMAP: Trigger factor~KEGG: dia:Dtpsy_1127 trigger factor~PFAM: Trigger factor, ribosome-binding, bacterial; Peptidyl-prolyl cis-trans isomerase, FKBP-type; Trigger factor, C-terminal, bacterial inference protein motif:HAMAP:MF_00303 db_xref InterPro:IPR001179 db_xref InterPro:IPR005215 db_xref InterPro:IPR008880 db_xref InterPro:IPR008881 1548359 1548967 gene locus_tag Alide2_1459 1548359 1548967 CDS product ATP-dependent Clp protease, proteolytic subunit ClpP EC_number 3.4.21.92 transl_table 11 protein_id gb|AEB83858.1||gnl|jgi|Alide2_1459 note TIGRFAM: Peptidase S14, ClpP~KEGG: dia:Dtpsy_1128 ATP-dependent Clp protease proteolytic subunit~PFAM: Peptidase S14, ClpP inference protein motif:TFAM:TIGR00493 db_xref GO:0004252 db_xref InterPro:IPR001907 1549067 1550332 gene locus_tag Alide2_1460 1549067 1550332 CDS product ATP-dependent Clp protease, ATP-binding subunit ClpX transl_table 11 protein_id gb|AEB83859.1||gnl|jgi|Alide2_1460 note TIGRFAM: Clp protease, ATP-binding subunit ClpX~PFAM: ATPase, AAA-2; Clp ATPase, C-terminal; Zinc finger, C4-type~KEGG: dia:Dtpsy_1129 ATP-dependent protease ATP-binding subunit ClpX~SMART: ATPase, AAA+ type, core inference protein motif:TFAM:TIGR00382 db_xref GO:0005524 db_xref GO:0051082 db_xref InterPro:IPR003593 db_xref InterPro:IPR004487 db_xref InterPro:IPR010603 db_xref InterPro:IPR013093 db_xref InterPro:IPR019489 1550471 1552891 gene locus_tag Alide2_1461 1550471 1552891 CDS product anti-sigma H sporulation factor, LonB EC_number 3.4.21.53 transl_table 11 protein_id gb|AEB83860.1||gnl|jgi|Alide2_1461 note SMART: Peptidase S16, lon N-terminal; ATPase, AAA+ type, core~TIGRFAM: Peptidase S16, ATP-dependent protease La~KEGG: dia:Dtpsy_1130 ATP-dependent protease La~PFAM: Peptidase S16, Lon C-terminal; Peptidase S16, lon N-terminal; ATPase, AAA-type, core inference protein motif:TFAM:TIGR00763 db_xref GO:0004176 db_xref GO:0005524 db_xref InterPro:IPR003111 db_xref InterPro:IPR003593 db_xref InterPro:IPR003959 db_xref InterPro:IPR004815 db_xref InterPro:IPR008269 1552987 1553062 gene locus_tag Alide2_R0021 note tRNA-Gly2 1552987 1553062 tRNA product tRNA-Gly 1553120 1553193 gene locus_tag Alide2_R0022 note tRNA-Cys1 1553120 1553193 tRNA product tRNA-Cys 1553362 1553979 gene locus_tag Alide2_1462 1553362 1553979 CDS product transcriptional regulator, TetR family transl_table 11 protein_id gb|AEB83861.1||gnl|jgi|Alide2_1462 note PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal~KEGG: dac:Daci_4464 TetR family transcriptional regulator inference protein motif:PFAM:PF00440 db_xref GO:0003700 db_xref InterPro:IPR001647 1554184 1555068 gene locus_tag Alide2_1463 1554184 1555068 CDS product Citryl-CoA lyase EC_number 4.1.3.34 transl_table 11 protein_id gb|AEB83862.1||gnl|jgi|Alide2_1463 note KEGG: bbr:BB0589 hypothetical protein~PFAM: Aldehyde-lyase domain inference protein motif:PRIAM:4.1.3.34 db_xref InterPro:IPR005000 1555096 1555557 gene locus_tag Alide2_1464 1555096 1555557 CDS product MaoC domain protein dehydratase transl_table 11 protein_id gb|AEB83863.1||gnl|jgi|Alide2_1464 note PFAM: MaoC-like dehydratase~KEGG: bur:Bcep18194_C7289 MaoC-like dehydratase inference protein motif:PFAM:PF01575 db_xref GO:0016491 db_xref InterPro:IPR002539 1555569 1556735 gene locus_tag Alide2_1465 1555569 1556735 CDS product Butyryl-CoA dehydrogenase EC_number 1.3.8.1 transl_table 11 protein_id gb|AEB83864.1||gnl|jgi|Alide2_1465 note KEGG: bur:Bcep18194_C7290 acyl-CoA dehydrogenase~PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal inference protein motif:PRIAM:1.3.99.2 db_xref InterPro:IPR006090 db_xref InterPro:IPR006091 db_xref InterPro:IPR006092 1556812 1558056 gene locus_tag Alide2_1466 1556812 1558056 CDS product Formyl-CoA transferase EC_number 2.8.3.16 transl_table 11 protein_id gb|AEB83865.1||gnl|jgi|Alide2_1466 note KEGG: bur:Bcep18194_B2644 L-carnitine dehydratase/bile acid-inducible protein F~PFAM: CoA-transferase family III inference protein motif:PRIAM:2.8.3.16 db_xref InterPro:IPR003673 1558058 1559218 gene locus_tag Alide2_1467 1558058 1559218 CDS product Alpha-methylacyl-CoA racemase EC_number 5.1.99.4 transl_table 11 protein_id gb|AEB83866.1||gnl|jgi|Alide2_1467 note KEGG: bbr:BB0593 CaiB/BaiF family protein~PFAM: CoA-transferase family III inference protein motif:PRIAM:5.1.99.4 db_xref InterPro:IPR003673 1559231 1560196 gene locus_tag Alide2_1468 1559231 1560196 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83867.1||gnl|jgi|Alide2_1468 note KEGG: bbr:BB0594 hypothetical protein inference similar to AA sequence:KEGG:BB0594 db_xref InterPro:IPR005064 1560193 1560615 gene locus_tag Alide2_1469 1560193 1560615 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83868.1||gnl|jgi|Alide2_1469 note KEGG: bbr:BB0595 hypothetical protein inference similar to AA sequence:KEGG:BB0595 db_xref InterPro:IPR011944 1560619 1561302 gene locus_tag Alide2_1470 1560619 1561302 CDS product nitroreductase transl_table 11 protein_id gb|AEB83869.1||gnl|jgi|Alide2_1470 note PFAM: Nitroreductase-like~KEGG: bbr:BB0596 nitroreductase family protein inference protein motif:PFAM:PF00881 db_xref GO:0016491 db_xref InterPro:IPR000415 1561307 1562077 gene locus_tag Alide2_1471 1561307 1562077 CDS product Enoyl-CoA hydratase/isomerase transl_table 11 protein_id gb|AEB83870.1||gnl|jgi|Alide2_1471 note PFAM: Crotonase, core~KEGG: bbr:BB0597 enoyl-CoA hydratase/isomerase family protein inference protein motif:PFAM:PF00378 db_xref GO:0003824 db_xref InterPro:IPR001753 1562272 1563444 gene locus_tag Alide2_1472 1562272 1563444 CDS product Extracellular ligand-binding receptor transl_table 11 protein_id gb|AEB83871.1||gnl|jgi|Alide2_1472 note PFAM: Extracellular ligand-binding receptor~KEGG: bbr:BB0598 extracellular ligand binding protein inference protein motif:PFAM:PF01094 db_xref InterPro:IPR001828 1563454 1564329 gene locus_tag Alide2_1473 1563454 1564329 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB83872.1||gnl|jgi|Alide2_1473 note PFAM: ABC transporter permease~KEGG: bbr:BB0599 putative branched-chain amino acid transport system permease protein inference protein motif:PFAM:PF02653 db_xref GO:0005215 db_xref InterPro:IPR001851 1564322 1565239 gene locus_tag Alide2_1474 1564322 1565239 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB83873.1||gnl|jgi|Alide2_1474 note PFAM: ABC transporter permease~KEGG: bbr:BB0600 putative branched-chain amino acid transport system permease protein inference protein motif:PFAM:PF02653 db_xref GO:0005215 db_xref InterPro:IPR001851 1565242 1565991 gene locus_tag Alide2_1475 1565242 1565991 CDS product Monosaccharide-transporting ATPase EC_number 3.6.3.17 transl_table 11 protein_id gb|AEB83874.1||gnl|jgi|Alide2_1475 note PFAM: ABC transporter-like~KEGG: bbr:BB0601 ABC transport system ATP-binding protein~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.17 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 1565981 1566700 gene locus_tag Alide2_1476 1565981 1566700 CDS product Monosaccharide-transporting ATPase EC_number 3.6.3.17 transl_table 11 protein_id gb|AEB83875.1||gnl|jgi|Alide2_1476 note PFAM: ABC transporter-like~KEGG: bbr:BB0602 ABC transport system ATP-binding protein~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.17 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 1568685 1566715 gene locus_tag Alide2_1477 1568685 1566715 CDS product Trimethylamine dehydrogenase EC_number 1.5.8.2 transl_table 11 protein_id gb|AEB83876.1||gnl|jgi|Alide2_1477 note KEGG: bbr:BB0603 NADH:flavin oxidoreductase / NADH oxidase family protein~PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal; Alanine dehydrogenase/PNT, C-terminal inference protein motif:PRIAM:1.5.8.2 db_xref InterPro:IPR001155 db_xref InterPro:IPR007698 1569464 1568682 gene locus_tag Alide2_1478 1569464 1568682 CDS product short-chain dehydrogenase/reductase SDR transl_table 11 protein_id gb|AEB83877.1||gnl|jgi|Alide2_1478 note PFAM: Short-chain dehydrogenase/reductase SDR~KEGG: bbr:BB0604 short chain dehydrogenase inference protein motif:PFAM:PF00106 db_xref GO:0016491 db_xref InterPro:IPR002198 1571050 1569629 gene locus_tag Alide2_1479 1571050 1569629 CDS product MmgE/PrpD family protein transl_table 11 protein_id gb|AEB83878.1||gnl|jgi|Alide2_1479 note PFAM: MmgE/PrpD~KEGG: bur:Bcep18194_B2639 hypothetical protein inference protein motif:PFAM:PF03972 db_xref GO:0047547 db_xref InterPro:IPR005656 1571140 1572096 gene locus_tag Alide2_1480 1571140 1572096 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB83879.1||gnl|jgi|Alide2_1480 note PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding~KEGG: bur:Bcep18194_B2640 LysR family transcriptional regulator inference protein motif:PFAM:PF00126 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 1572263 1573231 gene locus_tag Alide2_1481 1572263 1573231 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83880.1||gnl|jgi|Alide2_1481 note KEGG: bbr:BB0605 hypothetical protein inference similar to AA sequence:KEGG:BB0605 db_xref InterPro:IPR005064 1573234 1573329 gene locus_tag Alide2_1482 pseudo 1574549 1573392 gene locus_tag Alide2_1483 1574549 1573392 CDS product Alpha-methylacyl-CoA racemase EC_number 5.1.99.4 transl_table 11 protein_id gb|AEB83881.1||gnl|jgi|Alide2_1483 note KEGG: bur:Bcep18194_C7493 alpha-methylacyl-CoA racemase~PFAM: CoA-transferase family III inference protein motif:PRIAM:5.1.99.4 db_xref InterPro:IPR003673 1575071 1574595 gene locus_tag Alide2_1484 1575071 1574595 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83882.1||gnl|jgi|Alide2_1484 inference ab initio prediction:Prodigal:1.4 1575556 1575398 gene locus_tag Alide2_1485 1575556 1575398 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83883.1||gnl|jgi|Alide2_1485 inference ab initio prediction:Prodigal:1.4 1576738 1575581 gene locus_tag Alide2_1486 1576738 1575581 CDS product Formyl-CoA transferase EC_number 2.8.3.16 transl_table 11 protein_id gb|AEB83884.1||gnl|jgi|Alide2_1486 note KEGG: reu:Reut_A1830 L-carnitine dehydratase/bile acid-inducible protein F~PFAM: CoA-transferase family III inference protein motif:PRIAM:2.8.3.16 db_xref InterPro:IPR003673 1578018 1576786 gene locus_tag Alide2_1487 1578018 1576786 CDS product Formyl-CoA transferase EC_number 2.8.3.16 transl_table 11 protein_id gb|AEB83885.1||gnl|jgi|Alide2_1487 note KEGG: bur:Bcep18194_C7488 L-carnitine dehydratase/bile acid-inducible protein F~PFAM: CoA-transferase family III inference protein motif:PRIAM:2.8.3.16 db_xref InterPro:IPR003673 1579031 1578024 gene locus_tag Alide2_1488 1579031 1578024 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83886.1||gnl|jgi|Alide2_1488 note KEGG: reu:Reut_A1831 hypothetical protein inference similar to AA sequence:KEGG:Reut_A1831 db_xref InterPro:IPR005064 db_xref InterPro:IPR006311 1580330 1579149 gene locus_tag Alide2_1489 1580330 1579149 CDS product Propanoyl-CoA C-acyltransferase EC_number 2.3.1.176 transl_table 11 protein_id gb|AEB83887.1||gnl|jgi|Alide2_1489 note KEGG: eba:ebA306 lipid-transfer protein~PFAM: Beta-ketoacyl synthase, C-terminal inference protein motif:PRIAM:2.3.1.176 db_xref InterPro:IPR014031 1580684 1580343 gene locus_tag Alide2_1490 1580684 1580343 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83888.1||gnl|jgi|Alide2_1490 note KEGG: bbt:BBta_2933 hypothetical protein inference similar to AA sequence:KEGG:BBta_2933 1582044 1580686 gene locus_tag Alide2_1491 1582044 1580686 CDS product protein of unknown function DUF1446 transl_table 11 protein_id gb|AEB83889.1||gnl|jgi|Alide2_1491 note PFAM: Protein of unknown function DUF1446~KEGG: sth:STH1574 hypothetical protein inference protein motif:PFAM:PF07287 db_xref InterPro:IPR010839 1582550 1582050 gene locus_tag Alide2_1492 1582550 1582050 CDS product MaoC domain protein dehydratase transl_table 11 protein_id gb|AEB83890.1||gnl|jgi|Alide2_1492 note PFAM: MaoC-like dehydratase~KEGG: reu:Reut_A1834 MaoC-like dehydratase inference protein motif:PFAM:PF01575 db_xref GO:0016491 db_xref InterPro:IPR002539 1583707 1582565 gene locus_tag Alide2_1493 1583707 1582565 CDS product Butyryl-CoA dehydrogenase EC_number 1.3.8.1 transl_table 11 protein_id gb|AEB83891.1||gnl|jgi|Alide2_1493 note KEGG: reu:Reut_A1835 acyl-CoA dehydrogenase, C-terminal:acyl-CoA dehydrogenase, central region:acyl-CoA dehydrogenase, N-terminal~PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal inference protein motif:PRIAM:1.3.99.2 db_xref InterPro:IPR006090 db_xref InterPro:IPR006091 db_xref InterPro:IPR006092 1583966 1583853 gene locus_tag Alide2_1494 1583966 1583853 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83892.1||gnl|jgi|Alide2_1494 inference ab initio prediction:Prodigal:1.4 1584236 1585042 gene locus_tag Alide2_1495 1584236 1585042 CDS product 3-oxoacyl-(acyl-carrier-protein) reductase EC_number 1.1.1.100 transl_table 11 protein_id gb|AEB83893.1||gnl|jgi|Alide2_1495 note KEGG: bur:Bcep18194_C7276 short-chain dehydrogenase/reductase SDR~PFAM: Short-chain dehydrogenase/reductase SDR inference protein motif:PRIAM:1.1.1.100 db_xref InterPro:IPR002198 1585084 1585899 gene locus_tag Alide2_1496 1585084 1585899 CDS product Enoyl-CoA hydratase/isomerase transl_table 11 protein_id gb|AEB83894.1||gnl|jgi|Alide2_1496 note PFAM: Crotonase, core~KEGG: pol:Bpro_5272 short chain enoyl-CoA hydratase inference protein motif:PFAM:PF00378 db_xref GO:0003824 db_xref InterPro:IPR001753 1585961 1586974 gene locus_tag Alide2_1497 1585961 1586974 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83895.1||gnl|jgi|Alide2_1497 note KEGG: reu:Reut_A1831 hypothetical protein inference similar to AA sequence:KEGG:Reut_A1831 db_xref InterPro:IPR005064 1586980 1588197 gene locus_tag Alide2_1498 1586980 1588197 CDS product Formyl-CoA transferase EC_number 2.8.3.16 transl_table 11 protein_id gb|AEB83896.1||gnl|jgi|Alide2_1498 note KEGG: bur:Bcep18194_C7488 L-carnitine dehydratase/bile acid-inducible protein F~PFAM: CoA-transferase family III inference protein motif:PRIAM:2.8.3.16 db_xref InterPro:IPR003673 1589127 1588198 gene locus_tag Alide2_1499 1589127 1588198 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB83897.1||gnl|jgi|Alide2_1499 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: bur:Bcep18194_C7486 LysR family transcriptional regulator inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 1590633 1589158 gene locus_tag Alide2_1500 pseudo 1592278 1590659 gene locus_tag Alide2_1501 1592278 1590659 CDS product Choline dehydrogenase EC_number 1.1.99.1 transl_table 11 protein_id gb|AEB83898.1||gnl|jgi|Alide2_1501 note KEGG: bur:Bcep18194_C7484 glucose-methanol-choline oxidoreductase~PFAM: Glucose-methanol-choline oxidoreductase, N-terminal; Glucose-methanol-choline oxidoreductase, C-terminal inference protein motif:PRIAM:1.1.99.1 db_xref InterPro:IPR000172 db_xref InterPro:IPR007867 1592518 1593465 gene locus_tag Alide2_1502 1592518 1593465 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83899.1||gnl|jgi|Alide2_1502 note KEGG: vei:Veis_2943 hypothetical protein inference similar to AA sequence:KEGG:Veis_2943 db_xref InterPro:IPR005064 1593538 1594158 gene locus_tag Alide2_1503 1593538 1594158 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83900.1||gnl|jgi|Alide2_1503 note KEGG: bur:Bcep18194_C6760 hypothetical protein inference similar to AA sequence:KEGG:Bcep18194_C6760 1594155 1595594 gene locus_tag Alide2_1504 1594155 1595594 CDS product MmgE/PrpD family protein transl_table 11 protein_id gb|AEB83901.1||gnl|jgi|Alide2_1504 note PFAM: MmgE/PrpD~KEGG: bur:Bcep18194_C6759 MmgE/PrpD inference protein motif:PFAM:PF03972 db_xref GO:0047547 db_xref InterPro:IPR005656 1596433 1595639 gene locus_tag Alide2_1505 1596433 1595639 CDS product transcriptional regulator, IclR family transl_table 11 protein_id gb|AEB83902.1||gnl|jgi|Alide2_1505 note KEGG: bbr:BB0608 IclR family regulatory protein~PFAM: Transcription regulator IclR, N-terminal; Transcription regulator IclR, C-terminal~SMART: Transcription regulator IclR, N-terminal inference protein motif:PFAM:PF09339 db_xref GO:0003677 db_xref InterPro:IPR005471 db_xref InterPro:IPR014757 1597263 1596430 gene locus_tag Alide2_1506 1597263 1596430 CDS product transcriptional regulator, IclR family transl_table 11 protein_id gb|AEB83903.1||gnl|jgi|Alide2_1506 note KEGG: bpa:BPP0603 IclR family regulatory protein~PFAM: Transcription regulator IclR, N-terminal; Transcription regulator IclR, C-terminal~SMART: Transcription regulator IclR, N-terminal inference protein motif:PFAM:PF09339 db_xref GO:0003677 db_xref InterPro:IPR005471 db_xref InterPro:IPR014757 1597376 1598245 gene locus_tag Alide2_1507 1597376 1598245 CDS product alpha/beta hydrolase fold protein transl_table 11 protein_id gb|AEB83904.1||gnl|jgi|Alide2_1507 note PFAM: Alpha/beta hydrolase fold-1~KEGG: bxe:Bxe_A2766 non-heme peroxidase inference protein motif:PFAM:PF00561 db_xref InterPro:IPR000073 1599436 1598285 gene locus_tag Alide2_1508 1599436 1598285 CDS product Butyryl-CoA dehydrogenase EC_number 1.3.8.1 transl_table 11 protein_id gb|AEB83905.1||gnl|jgi|Alide2_1508 note KEGG: bbr:BB0611 acyl-CoA dehydrogenase~PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain inference protein motif:PRIAM:1.3.99.2 db_xref InterPro:IPR006090 db_xref InterPro:IPR006091 db_xref InterPro:IPR006092 1599672 1600547 gene locus_tag Alide2_1509 1599672 1600547 CDS product 3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoAhydratase EC_number 4.2.1.107 transl_table 11 protein_id gb|AEB83906.1||gnl|jgi|Alide2_1509 note KEGG: bpa:BPP0606 putative enoyl-CoA hydratase~PFAM: MaoC-like dehydratase inference protein motif:PRIAM:4.2.1.107 db_xref InterPro:IPR002539 1600578 1601327 gene locus_tag Alide2_1510 1600578 1601327 CDS product 3-oxoacyl-(acyl-carrier-protein) reductase EC_number 1.1.1.100 transl_table 11 protein_id gb|AEB83907.1||gnl|jgi|Alide2_1510 note PFAM: Short-chain dehydrogenase/reductase SDR~KEGG: bbr:BB0613 putative short chain dehydrogenase~SMART: Polyketide synthase/Fatty acid synthase, KR inference protein motif:PRIAM:1.1.1.100 db_xref InterPro:IPR002198 db_xref InterPro:IPR020842 1601408 1602613 gene locus_tag Alide2_1511 1601408 1602613 CDS product acetyl-CoA acetyltransferase EC_number 2.3.1.9 transl_table 11 protein_id gb|AEB83908.1||gnl|jgi|Alide2_1511 note TIGRFAM: Thiolase~KEGG: bur:Bcep18194_C7332 acetyl-CoA acetyltransferase~PFAM: Thiolase, N-terminal; Thiolase, C-terminal inference protein motif:TFAM:TIGR01930 db_xref GO:0005524 db_xref InterPro:IPR002155 db_xref InterPro:IPR020616 db_xref InterPro:IPR020617 1602627 1604564 gene locus_tag Alide2_1512 1602627 1604564 CDS product Acetate--CoA ligase EC_number 6.2.1.1 transl_table 11 protein_id gb|AEB83909.1||gnl|jgi|Alide2_1512 note KEGG: bbr:BB0615 AMP-binding enzyme~PFAM: AMP-dependent synthetase/ligase inference protein motif:PRIAM:6.2.1.1 db_xref InterPro:IPR000873 1604570 1605418 gene locus_tag Alide2_1513 1604570 1605418 CDS product transcriptional regulator, IclR family transl_table 11 protein_id gb|AEB83910.1||gnl|jgi|Alide2_1513 note KEGG: bpa:BPP0610 IclR family regulatory protein~PFAM: Transcription regulator IclR, N-terminal; Transcription regulator IclR, C-terminal~SMART: Transcription regulator IclR, N-terminal inference protein motif:PFAM:PF09339 db_xref GO:0003677 db_xref InterPro:IPR005471 db_xref InterPro:IPR014757 1605459 1606640 gene locus_tag Alide2_1514 1605459 1606640 CDS product Formyl-CoA transferase EC_number 2.8.3.16 transl_table 11 protein_id gb|AEB83911.1||gnl|jgi|Alide2_1514 note KEGG: bbr:BB0617 CaiB/BaiF family protein~PFAM: CoA-transferase family III inference protein motif:PRIAM:2.8.3.16 db_xref InterPro:IPR003673 1606652 1608082 gene locus_tag Alide2_1515 1606652 1608082 CDS product MmgE/PrpD family protein transl_table 11 protein_id gb|AEB83912.1||gnl|jgi|Alide2_1515 note PFAM: MmgE/PrpD~KEGG: bur:Bcep18194_C7308 MmgE/PrpD inference protein motif:PFAM:PF03972 db_xref GO:0047547 db_xref InterPro:IPR005656 1609008 1608079 gene locus_tag Alide2_1516 1609008 1608079 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB83913.1||gnl|jgi|Alide2_1516 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: bur:Bcep18194_C7296 LysR family transcriptional regulator inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 1609118 1610284 gene locus_tag Alide2_1517 1609118 1610284 CDS product Isovaleryl-CoA dehydrogenase EC_number 1.3.99.10 transl_table 11 protein_id gb|AEB83914.1||gnl|jgi|Alide2_1517 note KEGG: bur:Bcep18194_C7297 acyl-CoA dehydrogenase~PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal inference protein motif:PRIAM:1.3.99.10 db_xref InterPro:IPR006090 db_xref InterPro:IPR006091 db_xref InterPro:IPR006092 1610307 1611056 gene locus_tag Alide2_1518 1610307 1611056 CDS product Electron transfer flavoprotein alpha/beta-subunit transl_table 11 protein_id gb|AEB83915.1||gnl|jgi|Alide2_1518 note KEGG: dia:Dtpsy_3012 electron transfer flavoprotein alpha/beta-subunit~PFAM: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal~SMART: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal inference protein motif:PFAM:PF01012 db_xref InterPro:IPR014730 1611057 1612001 gene locus_tag Alide2_1519 1611057 1612001 CDS product Electron transfer flavoprotein alpha subunit transl_table 11 protein_id gb|AEB83916.1||gnl|jgi|Alide2_1519 note KEGG: rpi:Rpic_2640 electron transfer flavoprotein alpha subunit~PFAM: Electron transfer flavoprotein, alpha subunit, C-terminal; Electron transfer flavoprotein, alpha/beta-subunit, N-terminal~SMART: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal inference protein motif:PFAM:PF00766 db_xref InterPro:IPR014730 db_xref InterPro:IPR014731 1612090 1612938 gene locus_tag Alide2_1520 1612090 1612938 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83917.1||gnl|jgi|Alide2_1520 note KEGG: bbr:BB0622 hypothetical protein inference similar to AA sequence:KEGG:BB0622 1612951 1614150 gene locus_tag Alide2_1521 1612951 1614150 CDS product Formyl-CoA transferase EC_number 2.8.3.16 transl_table 11 protein_id gb|AEB83918.1||gnl|jgi|Alide2_1521 note KEGG: bur:Bcep18194_C7301 L-carnitine dehydratase/bile acid-inducible protein F~PFAM: CoA-transferase family III inference protein motif:PRIAM:2.8.3.16 db_xref InterPro:IPR003673 1614153 1614998 gene locus_tag Alide2_1522 1614153 1614998 CDS product HpcH/HpaI aldolase transl_table 11 protein_id gb|AEB83919.1||gnl|jgi|Alide2_1522 note PFAM: Aldehyde-lyase domain~KEGG: bur:Bcep18194_C7302 HpcH/HpaI aldolase inference protein motif:PFAM:PF03328 db_xref GO:0016830 db_xref InterPro:IPR005000 1615059 1616778 gene locus_tag Alide2_1523 pseudo 1617635 1616889 gene locus_tag Alide2_1524 1617635 1616889 CDS product ABC transporter related protein transl_table 11 protein_id gb|AEB83920.1||gnl|jgi|Alide2_1524 note KEGG: jan:Jann_2264 ABC transporter related~PFAM: ABC transporter-like~SMART: ATPase, AAA+ type, core inference protein motif:PFAM:PF00005 db_xref GO:0005524 db_xref GO:0016887 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 1618564 1617800 gene locus_tag Alide2_1525 1618564 1617800 CDS product Monosaccharide-transporting ATPase EC_number 3.6.3.17 transl_table 11 protein_id gb|AEB83921.1||gnl|jgi|Alide2_1525 note PFAM: ABC transporter-like~KEGG: jan:Jann_2265 ABC transporter related~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.17 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 1619454 1618561 gene locus_tag Alide2_1526 1619454 1618561 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB83922.1||gnl|jgi|Alide2_1526 note PFAM: ABC transporter permease~KEGG: jan:Jann_2266 inner-membrane translocator inference protein motif:PFAM:PF02653 db_xref GO:0005215 db_xref InterPro:IPR001851 1620352 1619459 gene locus_tag Alide2_1527 1620352 1619459 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB83923.1||gnl|jgi|Alide2_1527 note PFAM: ABC transporter permease~KEGG: jan:Jann_2267 inner-membrane translocator inference protein motif:PFAM:PF02653 db_xref GO:0005215 db_xref InterPro:IPR001851 1621564 1620431 gene locus_tag Alide2_1528 1621564 1620431 CDS product Extracellular ligand-binding receptor transl_table 11 protein_id gb|AEB83924.1||gnl|jgi|Alide2_1528 note PFAM: Extracellular ligand-binding receptor~KEGG: jan:Jann_2263 extracellular ligand-binding receptor inference protein motif:PFAM:PF01094 db_xref InterPro:IPR001828 1622721 1621651 gene locus_tag Alide2_1529 1622721 1621651 CDS product L-iditol 2-dehydrogenase EC_number 1.1.1.14 transl_table 11 protein_id gb|AEB83925.1||gnl|jgi|Alide2_1529 note KEGG: bur:Bcep18194_C7304 zinc-containing alcohol dehydrogenase superfamily protein~PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like inference protein motif:PRIAM:1.1.1.14 db_xref InterPro:IPR013149 db_xref InterPro:IPR013154 1624226 1622739 gene locus_tag Alide2_1530 1624226 1622739 CDS product Aldehyde Dehydrogenase transl_table 11 protein_id gb|AEB83926.1||gnl|jgi|Alide2_1530 note PFAM: Aldehyde dehydrogenase domain~KEGG: bur:Bcep18194_C6756 aldehyde dehydrogenase (acceptor) inference protein motif:PFAM:PF00171 db_xref GO:0016491 db_xref InterPro:IPR015590 1624443 1624234 gene locus_tag Alide2_1531 1624443 1624234 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83927.1||gnl|jgi|Alide2_1531 inference ab initio prediction:Prodigal:1.4 1625597 1624626 gene locus_tag Alide2_1532 1625597 1624626 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83928.1||gnl|jgi|Alide2_1532 note KEGG: bbr:BB0625 hypothetical protein inference similar to AA sequence:KEGG:BB0625 db_xref InterPro:IPR005064 db_xref InterPro:IPR006311 1627027 1625621 gene locus_tag Alide2_1533 1627027 1625621 CDS product MmgE/PrpD family protein transl_table 11 protein_id gb|AEB83929.1||gnl|jgi|Alide2_1533 note PFAM: MmgE/PrpD~KEGG: bpa:BPP0622 hypothetical protein inference protein motif:PFAM:PF03972 db_xref GO:0047547 db_xref InterPro:IPR005656 1628576 1627098 gene locus_tag Alide2_1534 1628576 1627098 CDS product Betaine-aldehyde dehydrogenase EC_number 1.2.1.8 transl_table 11 protein_id gb|AEB83930.1||gnl|jgi|Alide2_1534 note KEGG: bur:Bcep18194_C7305 aldehyde dehydrogenase (acceptor)~PFAM: Aldehyde dehydrogenase domain inference protein motif:PRIAM:1.2.1.8 db_xref InterPro:IPR015590 1630158 1628665 gene locus_tag Alide2_1535 1630158 1628665 CDS product Betaine-aldehyde dehydrogenase EC_number 1.2.1.8 transl_table 11 protein_id gb|AEB83931.1||gnl|jgi|Alide2_1535 note KEGG: bur:Bcep18194_C7306 aldehyde dehydrogenase (acceptor)~PFAM: Aldehyde dehydrogenase domain inference protein motif:PRIAM:1.2.1.8 db_xref InterPro:IPR015590 1631063 1630254 gene locus_tag Alide2_1536 1631063 1630254 CDS product Enoyl-CoA hydratase/isomerase transl_table 11 protein_id gb|AEB83932.1||gnl|jgi|Alide2_1536 note PFAM: Crotonase, core~KEGG: bbr:BB0629 enoyl-CoA hydratase inference protein motif:PFAM:PF00378 db_xref GO:0003824 db_xref InterPro:IPR001753 1631655 1631170 gene locus_tag Alide2_1537 1631655 1631170 CDS product protein of unknown function DUF894 DitE transl_table 11 protein_id gb|AEB83933.1||gnl|jgi|Alide2_1537 note PFAM: Major facilitator superfamily, enterobactin exporter EntS~KEGG: aav:Aave_4649 protein of unknown function DUF894, DitE inference protein motif:PFAM:PF05977 db_xref InterPro:IPR010290 1632752 1631697 gene locus_tag Alide2_1538 1632752 1631697 CDS product porin Gram-negative type transl_table 11 protein_id gb|AEB83934.1||gnl|jgi|Alide2_1538 note PFAM: Porin, Gram-negative type~KEGG: bcm:Bcenmc03_6621 porin inference protein motif:PFAM:PF00267 db_xref GO:0005215 db_xref InterPro:IPR001702 1633785 1632817 gene locus_tag Alide2_1539 1633785 1632817 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83935.1||gnl|jgi|Alide2_1539 note KEGG: reu:Reut_B3884 hypothetical protein inference similar to AA sequence:KEGG:Reut_B3884 db_xref InterPro:IPR005064 1634384 1635247 gene locus_tag Alide2_1540 1634384 1635247 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB83936.1||gnl|jgi|Alide2_1540 note PFAM: ABC transporter permease~KEGG: dac:Daci_0260 inner-membrane translocator inference protein motif:PFAM:PF02653 db_xref GO:0005215 db_xref InterPro:IPR001851 1635248 1636222 gene locus_tag Alide2_1541 1635248 1636222 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB83937.1||gnl|jgi|Alide2_1541 note PFAM: ABC transporter permease~KEGG: dac:Daci_0261 inner-membrane translocator inference protein motif:PFAM:PF02653 db_xref GO:0005215 db_xref InterPro:IPR001851 1636209 1636973 gene locus_tag Alide2_1542 1636209 1636973 CDS product Sulfate-transporting ATPase EC_number 3.6.3.25 transl_table 11 protein_id gb|AEB83938.1||gnl|jgi|Alide2_1542 note PFAM: ABC transporter-like~KEGG: dac:Daci_0262 ABC transporter-like protein~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.25 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 1636960 1637667 gene locus_tag Alide2_1543 1636960 1637667 CDS product Monosaccharide-transporting ATPase EC_number 3.6.3.17 transl_table 11 protein_id gb|AEB83939.1||gnl|jgi|Alide2_1543 note PFAM: ABC transporter-like~KEGG: dac:Daci_0263 ABC transporter-like protein~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.17 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 1637712 1638878 gene locus_tag Alide2_1544 1637712 1638878 CDS product Extracellular ligand-binding receptor transl_table 11 protein_id gb|AEB83940.1||gnl|jgi|Alide2_1544 note PFAM: Extracellular ligand-binding receptor~KEGG: dac:Daci_0264 extracellular ligand-binding receptor inference protein motif:PFAM:PF01094 db_xref InterPro:IPR001828 db_xref InterPro:IPR006311 1640719 1639019 gene locus_tag Alide2_1545 1640719 1639019 CDS product Long-chain-fatty-acid--CoA ligase EC_number 6.2.1.3 transl_table 11 protein_id gb|AEB83941.1||gnl|jgi|Alide2_1545 note KEGG: tin:Tint_1587 AMP-dependent synthetase and ligase~PFAM: AMP-dependent synthetase/ligase inference protein motif:PRIAM:6.2.1.3 db_xref InterPro:IPR000873 1641955 1640729 gene locus_tag Alide2_1546 1641955 1640729 CDS product Isovaleryl-CoA dehydrogenase EC_number 1.3.99.10 transl_table 11 protein_id gb|AEB83942.1||gnl|jgi|Alide2_1546 note KEGG: tin:Tint_1589 acyl-CoA dehydrogenase domain protein~PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal inference protein motif:PRIAM:1.3.99.10 db_xref InterPro:IPR006090 db_xref InterPro:IPR006091 db_xref InterPro:IPR006092 1642751 1641978 gene locus_tag Alide2_1547 1642751 1641978 CDS product 3-oxoacyl-(acyl-carrier-protein) reductase EC_number 1.1.1.100 transl_table 11 protein_id gb|AEB83943.1||gnl|jgi|Alide2_1547 note KEGG: dac:Daci_0266 short-chain dehydrogenase/reductase SDR~PFAM: Short-chain dehydrogenase/reductase SDR inference protein motif:PRIAM:1.1.1.100 db_xref InterPro:IPR002198 1643801 1643004 gene locus_tag Alide2_1548 1643801 1643004 CDS product transcriptional regulator, IclR family transl_table 11 protein_id gb|AEB83944.1||gnl|jgi|Alide2_1548 note KEGG: reh:H16_A2948 IclR family transcriptional regulator~PFAM: Transcription regulator IclR, N-terminal; Transcription regulator IclR, C-terminal~SMART: Transcription regulator IclR, N-terminal inference protein motif:PFAM:PF09339 db_xref GO:0003677 db_xref InterPro:IPR005471 db_xref InterPro:IPR014757 1643883 1644155 gene locus_tag Alide2_1549 1643883 1644155 CDS product histone family protein nucleoid-structuring protein H-NS transl_table 11 protein_id gb|AEB83945.1||gnl|jgi|Alide2_1549 note PFAM: Histone-like nucleoid-structuring protein H-NS~KEGG: ctt:CtCNB1_0646 histone-like nucleoid-structuring protein H-NS inference protein motif:PFAM:PF00816 db_xref GO:0003677 db_xref InterPro:IPR001801 1645400 1644171 gene locus_tag Alide2_1550 1645400 1644171 CDS product major facilitator superfamily MFS_1 transl_table 11 protein_id gb|AEB83946.1||gnl|jgi|Alide2_1550 note PFAM: Major facilitator superfamily MFS-1~KEGG: azo:azo3693 hypothetical protein inference protein motif:PFAM:PF07690 db_xref InterPro:IPR011701 1645555 1645630 gene locus_tag Alide2_R0023 note tRNA-Gly3 1645555 1645630 tRNA product tRNA-Gly 1647326 1646379 gene locus_tag Alide2_1551 1647326 1646379 CDS product Integrase catalytic region transl_table 11 protein_id gb|AEB83947.1||gnl|jgi|Alide2_1551 note PFAM: Integrase, catalytic core~KEGG: pol:Bpro_0754 integrase catalytic subunit inference protein motif:PFAM:PF00665 db_xref GO:0003677 db_xref InterPro:IPR001584 1649358 1647481 gene locus_tag Alide2_1552 1649358 1647481 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83948.1||gnl|jgi|Alide2_1552 note manually curated~KEGG: bxe:Bxe_A1801 hypothetical protein inference similar to AA sequence:KEGG:Bxe_A1801 1653014 1649355 gene locus_tag Alide2_1553 pseudo 1651396 1651719 gene locus_tag Alide2_1554 1651396 1651719 CDS product transposase IS3/IS911 family protein transl_table 11 protein_id gb|AEB83949.1||gnl|jgi|Alide2_1554 note PFAM: Transposase IS3/IS911family~KEGG: ajs:Ajs_0906 transposase IS3/IS911 family protein inference protein motif:PFAM:PF01527 db_xref GO:0003677 db_xref GO:0004803 db_xref InterPro:IPR002514 1651716 1652631 gene locus_tag Alide2_1555 pseudo 1654213 1653251 gene locus_tag Alide2_1556 1654213 1653251 CDS product transposase IS4 family protein transl_table 11 protein_id gb|AEB83950.1||gnl|jgi|Alide2_1556 note PFAM: Transposase, IS4-like~KEGG: bmj:BMULJ_05861 ISBmu20 transposase inference protein motif:PFAM:PF01609 db_xref GO:0003677 db_xref GO:0004803 db_xref InterPro:IPR002559 1655379 1654411 gene locus_tag Alide2_1557 1655379 1654411 CDS product transposase IS4 family protein transl_table 11 protein_id gb|AEB83951.1||gnl|jgi|Alide2_1557 note PFAM: Transposase, IS4-like~KEGG: axy:AXYL_01136 transposase, IS4 family protein 1 inference protein motif:PFAM:PF01609 db_xref GO:0003677 db_xref GO:0004803 db_xref InterPro:IPR002559 1655450 1655549 gene locus_tag Alide2_1558 pseudo 1655594 1655929 gene locus_tag Alide2_1559 1655594 1655929 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83952.1||gnl|jgi|Alide2_1559 inference ab initio prediction:Prodigal:1.4 1656842 1655898 gene locus_tag Alide2_1560 1656842 1655898 CDS product Integrase catalytic region transl_table 11 protein_id gb|AEB83953.1||gnl|jgi|Alide2_1560 note PFAM: Integrase, catalytic core~KEGG: xop:PXO_02075 IS1112 transposase inference protein motif:PFAM:PF00665 db_xref GO:0003677 db_xref InterPro:IPR001584 1656957 1657175 gene locus_tag Alide2_1561 pseudo 1657603 1657385 gene locus_tag Alide2_1562 1657603 1657385 CDS product Protein of unknown function DUF2274 transl_table 11 protein_id gb|AEB83954.1||gnl|jgi|Alide2_1562 note PFAM: Protein of unknown function DUF2274~KEGG: pap:PSPA7_3696 conjugal transfer protein inference protein motif:PFAM:PF10038 db_xref InterPro:IPR018733 1658886 1657600 gene locus_tag Alide2_1563 1658886 1657600 CDS product conjugation TrbI family protein transl_table 11 protein_id gb|AEB83955.1||gnl|jgi|Alide2_1563 note PFAM: Type IV secretion system, VirB10 / TraB / TrbI~KEGG: pap:PSPA7_3697 conjugation TrbI family protein inference protein motif:PFAM:PF03743 db_xref InterPro:IPR005498 1659872 1658889 gene locus_tag Alide2_1564 1659872 1658889 CDS product P-type conjugative transfer protein TrbG transl_table 11 protein_id gb|AEB83956.1||gnl|jgi|Alide2_1564 note KEGG: rme:Rmet_1349 conjugal transfer protein TrbG/VirB9/CagX~TIGRFAM: P-type conjugative transfer protein TrbG~PFAM: Conjugal transfer, TrbG/VirB9/CagX inference protein motif:TFAM:TIGR02775 db_xref InterPro:IPR010258 db_xref InterPro:IPR014142 1660573 1659869 gene locus_tag Alide2_1565 1660573 1659869 CDS product conjugal transfer protein TrbF transl_table 11 protein_id gb|AEB83957.1||gnl|jgi|Alide2_1565 note KEGG: pap:PSPA7_3699 conjugal transfer protein TrbF inference similar to AA sequence:KEGG:PSPA7_3699 1661971 1660586 gene locus_tag Alide2_1566 1661971 1660586 CDS product P-type conjugative transfer protein TrbL transl_table 11 protein_id gb|AEB83958.1||gnl|jgi|Alide2_1566 note KEGG: tgr:Tgr7_1901 conjugal transfer protein TrbL~TIGRFAM: Conjugal transfer, TrbL~PFAM: Conjugal transfer, TrbL/VirB6 inference protein motif:TFAM:TIGR02783 db_xref InterPro:IPR007688 db_xref InterPro:IPR014150 1662288 1661968 gene locus_tag Alide2_1567 1662288 1661968 CDS product putative lipoprotein transl_table 11 protein_id gb|AEB83959.1||gnl|jgi|Alide2_1567 note KEGG: pap:PSPA7_3701 putative lipoprotein inference similar to AA sequence:KEGG:PSPA7_3701 1663026 1662301 gene locus_tag Alide2_1568 1663026 1662301 CDS product P-type conjugative transfer protein TrbJ transl_table 11 protein_id gb|AEB83960.1||gnl|jgi|Alide2_1568 note TIGRFAM: P-type conjugative transfer protein TrbJ~KEGG: pap:PSPA7_3702 conjugal transfer protein TrbJ inference protein motif:TFAM:TIGR02780 db_xref InterPro:IPR014147 1665476 1663023 gene locus_tag Alide2_1569 1665476 1663023 CDS product CagE, TrbE, VirB component of type IV transporter system, conserved region transl_table 11 protein_id gb|AEB83961.1||gnl|jgi|Alide2_1569 note KEGG: pap:PSPA7_3703 conjugal transfer ATPase TrbE~PFAM: CagE, TrbE, VirB component of type IV transporter system, central domain~SMART: ATPase, AAA+ type, core inference protein motif:PFAM:PF03135 db_xref GO:0005524 db_xref InterPro:IPR003593 db_xref InterPro:IPR018145 1665764 1665492 gene locus_tag Alide2_1570 1665764 1665492 CDS product conjugal transfer protein transl_table 11 protein_id gb|AEB83962.1||gnl|jgi|Alide2_1570 note KEGG: pap:PSPA7_3704 conjugal transfer protein inference similar to AA sequence:KEGG:PSPA7_3704 1666144 1665761 gene locus_tag Alide2_1571 1666144 1665761 CDS product Conjugal transfer protein TrbC transl_table 11 protein_id gb|AEB83963.1||gnl|jgi|Alide2_1571 note PFAM: Conjugal transfer,TrbC~KEGG: rme:Rmet_1551 conjugal transfer protein TrbC inference protein motif:PFAM:PF04956 db_xref InterPro:IPR007039 1667193 1666141 gene locus_tag Alide2_1572 1667193 1666141 CDS product P-type conjugative transfer ATPase TrbB transl_table 11 protein_id gb|AEB83964.1||gnl|jgi|Alide2_1572 note KEGG: pap:PSPA7_3706 P-type conjugative transfer ATPase TrbB~TIGRFAM: ATPase, P-type conjugative transfer, TrbB~PFAM: Type II secretion system protein E inference protein motif:TFAM:TIGR02782 db_xref InterPro:IPR001482 db_xref InterPro:IPR014149 1667654 1667190 gene locus_tag Alide2_1573 1667654 1667190 CDS product CopG-like domain-containing protein DNA-binding protein transl_table 11 protein_id gb|AEB83965.1||gnl|jgi|Alide2_1573 note PFAM: CopG-like DNA-binding~KEGG: dac:Daci_0439 CopG/DNA-binding domain-containing protein inference protein motif:PFAM:PF01402 db_xref GO:0003677 db_xref InterPro:IPR002145 1669651 1667651 gene locus_tag Alide2_1574 1669651 1667651 CDS product TRAG family protein transl_table 11 protein_id gb|AEB83966.1||gnl|jgi|Alide2_1574 note PFAM: Ti-type conjugative transfer system, TraG-like~KEGG: pau:PA14_30960 conjugal transfer coupling protein TraG inference protein motif:PFAM:PF02534 db_xref InterPro:IPR003688 1670165 1669887 gene locus_tag Alide2_1575 1670165 1669887 CDS product putative lipoprotein transl_table 11 protein_id gb|AEB83967.1||gnl|jgi|Alide2_1575 note KEGG: pap:PSPA7_3722 putative lipoprotein inference similar to AA sequence:KEGG:PSPA7_3722 1671106 1670162 gene locus_tag Alide2_1576 1671106 1670162 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB83968.1||gnl|jgi|Alide2_1576 note KEGG: bpt:Bpet2202 LysR family transcriptional regulator~manually curated~PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 1672462 1671209 gene locus_tag Alide2_1577 1672462 1671209 CDS product monooxygenase FAD-binding protein transl_table 11 protein_id gb|AEB83969.1||gnl|jgi|Alide2_1577 note PFAM: Monooxygenase, FAD-binding~KEGG: ami:Amir_4339 monooxygenase FAD-binding inference protein motif:PFAM:PF01494 db_xref GO:0004497 db_xref InterPro:IPR002938 1673990 1672473 gene locus_tag Alide2_1578 1673990 1672473 CDS product RND efflux system, outer membrane lipoprotein, NodT family transl_table 11 protein_id gb|AEB83970.1||gnl|jgi|Alide2_1578 note KEGG: bbr:BB2379 outer membrane efflux protein~TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT~PFAM: Outer membrane efflux protein inference protein motif:TFAM:TIGR01845 db_xref GO:0005215 db_xref GO:0008289 db_xref InterPro:IPR003423 db_xref InterPro:IPR010131 1675118 1674003 gene locus_tag Alide2_1579 1675118 1674003 CDS product ABC-2 type transporter transl_table 11 protein_id gb|AEB83971.1||gnl|jgi|Alide2_1579 note PFAM: ABC-2 type transporter~KEGG: abc:ACICU_01702 ABC-type multidrug transport system, permease component inference protein motif:PFAM:PF01061 db_xref InterPro:IPR013525 1676266 1675124 gene locus_tag Alide2_1580 1676266 1675124 CDS product ABC-2 type transporter transl_table 11 protein_id gb|AEB83972.1||gnl|jgi|Alide2_1580 note PFAM: ABC-2 type transporter~KEGG: bpa:BPP1316 hypothetical protein inference protein motif:PFAM:PF01061 db_xref InterPro:IPR013525 1678041 1676263 gene locus_tag Alide2_1581 1678041 1676263 CDS product Sulfate-transporting ATPase, Polyamine-transporting ATPase EC_number 3.6.3.31 EC_number 3.6.3.25 transl_table 11 protein_id gb|AEB83973.1||gnl|jgi|Alide2_1581 note PFAM: ABC transporter-like~KEGG: pag:PLES_25911 ATP-binding protein~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.25, 3.6.3.31 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 1679036 1678038 gene locus_tag Alide2_1582 1679036 1678038 CDS product secretion protein HlyD family protein transl_table 11 protein_id gb|AEB83974.1||gnl|jgi|Alide2_1582 note PFAM: Secretion protein HlyD~KEGG: bbr:BB2383 HlyD family secretion protein inference protein motif:PFAM:PF00529 db_xref GO:0008565 db_xref InterPro:IPR006143 1679163 1679855 gene locus_tag Alide2_1583 1679163 1679855 CDS product Transcriptional regulator TetR transl_table 11 protein_id gb|AEB83975.1||gnl|jgi|Alide2_1583 note PFAM: Transcription regulator YbiH, C-terminal; Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal~KEGG: ppg:PputGB1_3284 TetR family transcriptional regulator inference protein motif:PFAM:PF09209 db_xref GO:0003700 db_xref InterPro:IPR001647 db_xref InterPro:IPR015292 1679860 1681881 gene locus_tag Alide2_1584 1679860 1681881 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83976.1||gnl|jgi|Alide2_1584 note KEGG: sml:Smlt1841 hypothetical protein inference similar to AA sequence:KEGG:Smlt1841 1683965 1681968 gene locus_tag Alide2_1585 1683965 1681968 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83977.1||gnl|jgi|Alide2_1585 note KEGG: pap:PSPA7_3726 hypothetical protein inference similar to AA sequence:KEGG:PSPA7_3726 1684417 1683962 gene locus_tag Alide2_1586 1684417 1683962 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83978.1||gnl|jgi|Alide2_1586 note manually curated~KEGG: sml:Smlt1309 hypothetical protein inference similar to AA sequence:KEGG:Smlt1309 1685001 1684414 gene locus_tag Alide2_1587 1685001 1684414 CDS product Peptidase S26, conserved region transl_table 11 protein_id gb|AEB83979.1||gnl|jgi|Alide2_1587 note PFAM: Peptidase S26, conserved region~KEGG: rme:Rmet_1258 TraF peptidase inference protein motif:PFAM:PF10502 db_xref InterPro:IPR019533 1685543 1684998 gene locus_tag Alide2_1588 1685543 1684998 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83980.1||gnl|jgi|Alide2_1588 note KEGG: rme:Rmet_1257 hypothetical protein inference similar to AA sequence:KEGG:Rmet_1257 1685824 1685540 gene locus_tag Alide2_1589 1685824 1685540 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83981.1||gnl|jgi|Alide2_1589 note KEGG: bpt:Bpet2187 hypothetical protein inference similar to AA sequence:KEGG:Bpet2187 1686459 1685821 gene locus_tag Alide2_1590 1686459 1685821 CDS product Cobyrinic acid ac-diamide synthase transl_table 11 protein_id gb|AEB83982.1||gnl|jgi|Alide2_1590 note KEGG: rme:Rmet_1255 cobyrinic acid a,c-diamide synthase~manually curated~PFAM: Cobyrinic acid a,c-diamide synthase inference protein motif:PFAM:PF01656 db_xref InterPro:IPR002586 1687570 1686713 gene locus_tag Alide2_1591 1687570 1686713 CDS product Replication initiator protein A transl_table 11 protein_id gb|AEB83983.1||gnl|jgi|Alide2_1591 note PFAM: Replication initiator protein A~KEGG: dia:Dtpsy_3526 putative replication initiator and transcription repressor protein inference protein motif:PFAM:PF10134 db_xref InterPro:IPR018777 1687878 1687597 gene locus_tag Alide2_1592 1687878 1687597 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83984.1||gnl|jgi|Alide2_1592 note KEGG: ajs:Ajs_2652 hypothetical protein inference similar to AA sequence:KEGG:Ajs_2652 1688736 1687963 gene locus_tag Alide2_1593 1688736 1687963 CDS product Protein of unknown function DUF2285 transl_table 11 protein_id gb|AEB83985.1||gnl|jgi|Alide2_1593 note PFAM: Protein of unknown function DUF2285~KEGG: dac:Daci_0459 hypothetical protein inference protein motif:PFAM:PF10074 db_xref InterPro:IPR018754 1689549 1689046 gene locus_tag Alide2_1594 1689549 1689046 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83986.1||gnl|jgi|Alide2_1594 note manually curated~KEGG: rme:Rmet_1250 hypothetical protein inference similar to AA sequence:KEGG:Rmet_1250 1689637 1689942 gene locus_tag Alide2_1595 1689637 1689942 CDS product helix-turn-helix domain protein transl_table 11 protein_id gb|AEB83987.1||gnl|jgi|Alide2_1595 note KEGG: rme:Rmet_1249 XRE family transcriptional regulator~PFAM: Helix-turn-helix type 3~SMART: Helix-turn-helix type 3 inference protein motif:PFAM:PF01381 db_xref GO:0043565 db_xref InterPro:IPR001387 1690359 1690006 gene locus_tag Alide2_1596 1690359 1690006 CDS product protein of unknown function DUF736 transl_table 11 protein_id gb|AEB83988.1||gnl|jgi|Alide2_1596 note KEGG: ajs:Ajs_2644 hypothetical protein~manually curated~PFAM: Protein of unknown function DUF736 inference protein motif:PFAM:PF05284 db_xref InterPro:IPR007948 1691106 1691435 gene locus_tag Alide2_1597 1691106 1691435 CDS product regulatory protein ArsR transl_table 11 protein_id gb|AEB83989.1||gnl|jgi|Alide2_1597 note SMART: HTH transcriptional regulator, ArsR~KEGG: bpt:Bpet1026 ArsR family transcriptional regulator inference protein motif:SMART:SM00418 db_xref GO:0003700 db_xref InterPro:IPR001845 1691449 1691919 gene locus_tag Alide2_1598 1691449 1691919 CDS product Glyoxalase/bleomycin resistance protein/dioxygenase transl_table 11 protein_id gb|AEB83990.1||gnl|jgi|Alide2_1598 note PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase~KEGG: dac:Daci_0488 glyoxalase/bleomycin resistance protein/dioxygenase inference protein motif:PFAM:PF00903 db_xref InterPro:IPR004360 1691932 1692429 gene locus_tag Alide2_1599 1691932 1692429 CDS product protein tyrosine phosphatase transl_table 11 protein_id gb|AEB83991.1||gnl|jgi|Alide2_1599 note KEGG: bpt:Bpet1024 hypothetical protein~PFAM: Protein-tyrosine phosphatase, low molecular weight~SMART: Protein-tyrosine phosphatase, low molecular weight inference protein motif:PFAM:PF01451 db_xref GO:0004725 db_xref InterPro:IPR017867 1692440 1693525 gene locus_tag Alide2_1600 1692440 1693525 CDS product arsenical-resistance protein transl_table 11 protein_id gb|AEB83992.1||gnl|jgi|Alide2_1600 note KEGG: dac:Daci_0490 arsenical-resistance protein~TIGRFAM: Arsenical-resistance protein ACR3~PFAM: Bile acid:sodium symporter inference protein motif:TFAM:TIGR00832 db_xref InterPro:IPR002657 db_xref InterPro:IPR004706 1693543 1693965 gene locus_tag Alide2_1601 1693543 1693965 CDS product arsenate reductase EC_number 1.20.4.1 transl_table 11 protein_id gb|AEB83993.1||gnl|jgi|Alide2_1601 note TIGRFAM: Arsenate reductase~KEGG: rpf:Rpic12D_0647 arsenate reductase~PFAM: Arsenate reductase-like inference protein motif:TFAM:TIGR00014 db_xref GO:0008794 db_xref InterPro:IPR006659 db_xref InterPro:IPR006660 1694064 1694366 gene locus_tag Alide2_1602 1694064 1694366 CDS product transcriptional regulator, PadR-like family transl_table 11 protein_id gb|AEB83994.1||gnl|jgi|Alide2_1602 note PFAM: Transcription regulator PadR N-terminal-like~KEGG: oan:Oant_4665 PadR-like family transcriptional regulator inference protein motif:PFAM:PF03551 db_xref InterPro:IPR005149 1694363 1695592 gene locus_tag Alide2_1603 1694363 1695592 CDS product chromate transporter, chromate ion transporter (CHR) family transl_table 11 protein_id gb|AEB83995.1||gnl|jgi|Alide2_1603 note KEGG: bav:BAV1573 chromate transporter~TIGRFAM: Chromate transporter, long chain~PFAM: Chromate transporter inference protein motif:TFAM:TIGR00937 db_xref InterPro:IPR003370 db_xref InterPro:IPR014047 1695598 1696128 gene locus_tag Alide2_1604 1695598 1696128 CDS product GCN5-related N-acetyltransferase transl_table 11 protein_id gb|AEB83996.1||gnl|jgi|Alide2_1604 note PFAM: GCN5-related N-acetyltransferase (GNAT) domain~KEGG: rme:Rmet_1246 GCN5-related N-acetyltransferase inference protein motif:PFAM:PF00583 db_xref GO:0008080 db_xref InterPro:IPR000182 1698387 1696336 gene locus_tag Alide2_1605 1698387 1696336 CDS product ParB domain protein nuclease transl_table 11 protein_id gb|AEB83997.1||gnl|jgi|Alide2_1605 note KEGG: rme:Rmet_1245 ParB family protein~PFAM: ParB-like nuclease~SMART: ParB-like nuclease inference protein motif:PFAM:PF02195 db_xref GO:0003677 db_xref InterPro:IPR003115 1699289 1698465 gene locus_tag Alide2_1606 1699289 1698465 CDS product protein of unknown function DUF932 transl_table 11 protein_id gb|AEB83998.1||gnl|jgi|Alide2_1606 note PFAM: Protein of unknown function DUF932~KEGG: ajs:Ajs_2639 hypothetical protein inference protein motif:PFAM:PF06067 db_xref InterPro:IPR009276 1699816 1700484 gene locus_tag Alide2_1607 1699816 1700484 CDS product hypothetical protein transl_table 11 protein_id gb|AEB83999.1||gnl|jgi|Alide2_1607 note KEGG: dia:Dtpsy_1275 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_1275 1700865 1700515 gene locus_tag Alide2_1608 1700865 1700515 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84000.1||gnl|jgi|Alide2_1608 note KEGG: rme:Rmet_3038 hypothetical protein inference similar to AA sequence:KEGG:Rmet_3038 1701653 1701147 gene locus_tag Alide2_1609 1701653 1701147 CDS product DNA repair protein RadC transl_table 11 protein_id gb|AEB84001.1||gnl|jgi|Alide2_1609 note KEGG: tgr:Tgr7_1867 DNA repair protein RadC~TIGRFAM: Uncharacterised protein family UPF0758~PFAM: Uncharacterised protein family UPF0758 inference protein motif:TFAM:TIGR00608 db_xref InterPro:IPR001405 1702066 1703208 gene locus_tag Alide2_1610 1702066 1703208 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84002.1||gnl|jgi|Alide2_1610 note KEGG: ajs:Ajs_2635 hypothetical protein inference similar to AA sequence:KEGG:Ajs_2635 1703212 1703799 gene locus_tag Alide2_1611 1703212 1703799 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84003.1||gnl|jgi|Alide2_1611 note manually curated~KEGG: dia:Dtpsy_1271 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_1271 1703841 1704326 gene locus_tag Alide2_1612 1703841 1704326 CDS product Domain of unknown function DUF1863 transl_table 11 protein_id gb|AEB84004.1||gnl|jgi|Alide2_1612 note PFAM: MTH538 TIR-like domain~KEGG: ajs:Ajs_2632 hypothetical protein inference protein motif:PFAM:PF08937 db_xref InterPro:IPR015032 1705005 1704343 gene locus_tag Alide2_1613 1705005 1704343 CDS product Uracil-DNA glycosylase superfamily transl_table 11 protein_id gb|AEB84005.1||gnl|jgi|Alide2_1613 note PFAM: Uracil-DNA glycosylase-like~KEGG: ajs:Ajs_2631 hypothetical protein inference protein motif:PFAM:PF03167 db_xref InterPro:IPR005122 1706138 1705002 gene locus_tag Alide2_1614 1706138 1705002 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84006.1||gnl|jgi|Alide2_1614 note KEGG: ajs:Ajs_2630 hypothetical protein inference similar to AA sequence:KEGG:Ajs_2630 1706768 1706142 gene locus_tag Alide2_1615 1706768 1706142 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84007.1||gnl|jgi|Alide2_1615 note manually curated~KEGG: ajs:Ajs_2629 hypothetical protein inference similar to AA sequence:KEGG:Ajs_2629 1707235 1706768 gene locus_tag Alide2_1616 1707235 1706768 CDS product Domain of unknown function DUF1863 transl_table 11 protein_id gb|AEB84008.1||gnl|jgi|Alide2_1616 note PFAM: MTH538 TIR-like domain~KEGG: ajs:Ajs_2628 hypothetical protein inference protein motif:PFAM:PF08937 db_xref InterPro:IPR015032 1707626 1707324 gene locus_tag Alide2_1617 1707626 1707324 CDS product transcriptional regulator, XRE family transl_table 11 protein_id gb|AEB84009.1||gnl|jgi|Alide2_1617 note KEGG: ajs:Ajs_2627 transcriptional regulator inference similar to AA sequence:KEGG:Ajs_2627 1707993 1707610 gene locus_tag Alide2_1618 1707993 1707610 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84010.1||gnl|jgi|Alide2_1618 note KEGG: ajs:Ajs_2626 hypothetical protein inference similar to AA sequence:KEGG:Ajs_2626 1709335 1708133 gene locus_tag Alide2_1619 1709335 1708133 CDS product integrase family protein transl_table 11 protein_id gb|AEB84011.1||gnl|jgi|Alide2_1619 note PFAM: Integrase, catalytic core, phage~KEGG: ajs:Ajs_2625 phage integrase family protein inference protein motif:PFAM:PF00589 db_xref GO:0003677 db_xref InterPro:IPR002104 1709584 1710213 gene locus_tag Alide2_1620 1709584 1710213 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84012.1||gnl|jgi|Alide2_1620 note KEGG: ajs:Ajs_2624 hypothetical protein inference similar to AA sequence:KEGG:Ajs_2624 1710338 1712296 gene locus_tag Alide2_1621 1710338 1712296 CDS product excinuclease ABC, C subunit transl_table 11 protein_id gb|AEB84013.1||gnl|jgi|Alide2_1621 note TIGRFAM: Excinuclease ABC, C subunit~PFAM: Excinuclease ABC, C subunit, C-terminal; Excinuclease ABC, C subunit, N-terminal; UvrB/UvrC protein~KEGG: dia:Dtpsy_1185 excinuclease ABC subunit C~SMART: Excinuclease ABC, C subunit, N-terminal; Helix-hairpin-helix DNA-binding motif, class 1 inference protein motif:TFAM:TIGR00194 db_xref GO:0009381 db_xref InterPro:IPR000305 db_xref InterPro:IPR001162 db_xref InterPro:IPR001943 db_xref InterPro:IPR003583 db_xref InterPro:IPR004791 1712326 1712913 gene locus_tag Alide2_1622 1712326 1712913 CDS product CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase EC_number 2.7.8.5 transl_table 11 protein_id gb|AEB84014.1||gnl|jgi|Alide2_1622 note TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase~KEGG: dia:Dtpsy_1186 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase~PFAM: CDP-alcohol phosphatidyltransferase inference protein motif:TFAM:TIGR00560 db_xref GO:0008444 db_xref InterPro:IPR000462 db_xref InterPro:IPR004570 1713258 1713530 gene locus_tag Alide2_1623 1713258 1713530 CDS product histone family protein DNA-binding protein transl_table 11 protein_id gb|AEB84015.1||gnl|jgi|Alide2_1623 note KEGG: dia:Dtpsy_1187 histone family protein DNA-binding protein~PFAM: Histone-like bacterial DNA-binding protein~SMART: Histone-like bacterial DNA-binding protein inference protein motif:PFAM:PF00216 db_xref GO:0003677 db_xref InterPro:IPR000119 1713545 1713620 gene locus_tag Alide2_R0024 note tRNA-Val1 1713545 1713620 tRNA product tRNA-Val 1713680 1715602 gene locus_tag Alide2_1624 1713680 1715602 CDS product PpiC-type peptidyl-prolyl cis-trans isomerase transl_table 11 protein_id gb|AEB84016.1||gnl|jgi|Alide2_1624 note PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type~KEGG: dia:Dtpsy_1188 PpiC-type peptidyl-prolyl cis-trans isomerase inference protein motif:PFAM:PF00639 db_xref GO:0016853 db_xref InterPro:IPR000297 1717180 1715960 gene locus_tag Alide2_1625 1717180 1715960 CDS product Extracellular ligand-binding receptor transl_table 11 protein_id gb|AEB84017.1||gnl|jgi|Alide2_1625 note PFAM: Extracellular ligand-binding receptor~KEGG: mno:Mnod_4450 extracellular ligand-binding receptor inference protein motif:PFAM:PF01094 db_xref InterPro:IPR001828 1718092 1717307 gene locus_tag Alide2_1626 1718092 1717307 CDS product Enoyl-CoA hydratase/isomerase transl_table 11 protein_id gb|AEB84018.1||gnl|jgi|Alide2_1626 note PFAM: Crotonase, core~KEGG: mlo:mll1009 enoyl-CoA hydratase inference protein motif:PFAM:PF00378 db_xref GO:0003824 db_xref InterPro:IPR001753 1718192 1719553 gene locus_tag Alide2_1627 1718192 1719553 CDS product Phenylacetate--CoA ligase EC_number 6.2.1.30 transl_table 11 protein_id gb|AEB84019.1||gnl|jgi|Alide2_1627 note KEGG: rxy:Rxyl_1851 phenylacetate-CoA ligase inference protein motif:PRIAM:6.2.1.30 1719573 1721153 gene locus_tag Alide2_1628 1719573 1721153 CDS product Methylcrotonoyl-CoA carboxylase EC_number 6.4.1.4 transl_table 11 protein_id gb|AEB84020.1||gnl|jgi|Alide2_1628 note KEGG: pol:Bpro_5271 carboxyl transferase~PFAM: Carboxyl transferase inference protein motif:PRIAM:6.4.1.4 db_xref InterPro:IPR000022 1721162 1723168 gene locus_tag Alide2_1629 1721162 1723168 CDS product Methylcrotonoyl-CoA carboxylase EC_number 6.4.1.4 transl_table 11 protein_id gb|AEB84021.1||gnl|jgi|Alide2_1629 note PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Carbamoyl-phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; Biotin/lipoyl attachment~KEGG: pol:Bpro_5270 carbamoyl-phosphate synthase L chain, ATP-binding~SMART: Biotin carboxylase, C-terminal inference protein motif:PRIAM:6.4.1.4 db_xref InterPro:IPR000089 db_xref InterPro:IPR005479 db_xref InterPro:IPR005481 db_xref InterPro:IPR005482 1723184 1724143 gene locus_tag Alide2_1630 1723184 1724143 CDS product Hydroxymethylglutaryl-CoA lyase EC_number 4.1.3.4 transl_table 11 protein_id gb|AEB84022.1||gnl|jgi|Alide2_1630 note KEGG: pol:Bpro_5269 hydroxymethylglutaryl-CoA lyase~PFAM: Pyruvate carboxyltransferase inference protein motif:PRIAM:4.1.3.4 db_xref InterPro:IPR000891 1724194 1725723 gene locus_tag Alide2_1631 1724194 1725723 CDS product o-succinylbenzoate--CoA ligase EC_number 6.2.1.26 transl_table 11 protein_id gb|AEB84023.1||gnl|jgi|Alide2_1631 note KEGG: rlt:Rleg2_6334 AMP-dependent synthetase and ligase~PFAM: AMP-dependent synthetase/ligase inference protein motif:PRIAM:6.2.1.26 db_xref InterPro:IPR000873 1726366 1725773 gene locus_tag Alide2_1632 1726366 1725773 CDS product Tetracycline transcriptional regulator YsiA domain-containing protein transl_table 11 protein_id gb|AEB84024.1||gnl|jgi|Alide2_1632 note PFAM: Transcription regulator YsiA, C-terminal~KEGG: azc:AZC_4590 transcriptional regulator inference protein motif:PFAM:PF08359 db_xref InterPro:IPR013570 1727345 1726509 gene locus_tag Alide2_1633 1727345 1726509 CDS product Enoyl-CoA hydratase/isomerase transl_table 11 protein_id gb|AEB84025.1||gnl|jgi|Alide2_1633 note PFAM: Crotonase, core~KEGG: pol:Bpro_1631 enoyl-CoA hydratase/isomerase inference protein motif:PFAM:PF00378 db_xref GO:0003824 db_xref InterPro:IPR001753 1727490 1727347 gene locus_tag Alide2_1634 pseudo 1727676 1727592 gene locus_tag Alide2_R0025 note tRNA-Leu5 1727676 1727592 tRNA product tRNA-Leu 1727720 1728625 gene locus_tag Alide2_1635 1727720 1728625 CDS product cysteine synthase EC_number 2.5.1.47 transl_table 11 protein_id gb|AEB84026.1||gnl|jgi|Alide2_1635 note TIGRFAM: Cysteine synthase K/M; Cysteine synthase B~KEGG: dia:Dtpsy_2386 cysteine synthase B~PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit inference protein motif:TFAM:TIGR01136 db_xref GO:0004124 db_xref InterPro:IPR001926 db_xref InterPro:IPR005856 db_xref InterPro:IPR005858 1728631 1729194 gene locus_tag Alide2_1636 1728631 1729194 CDS product NUDIX hydrolase transl_table 11 protein_id gb|AEB84027.1||gnl|jgi|Alide2_1636 note PFAM: NUDIX hydrolase domain~KEGG: dia:Dtpsy_2385 NUDIX hydrolase inference protein motif:PFAM:PF00293 db_xref GO:0016787 db_xref InterPro:IPR000086 1729200 1729427 gene locus_tag Alide2_1637 1729200 1729427 CDS product SirA-like domain-containing protein transl_table 11 protein_id gb|AEB84028.1||gnl|jgi|Alide2_1637 note PFAM: SirA-like~KEGG: dia:Dtpsy_2384 SirA family protein inference protein motif:PFAM:PF01206 db_xref GO:0005515 db_xref GO:0016783 db_xref InterPro:IPR001455 1730402 1729518 gene locus_tag Alide2_1638 1730402 1729518 CDS product UTP-glucose-1-phosphate uridylyltransferase EC_number 2.7.7.9 transl_table 11 protein_id gb|AEB84029.1||gnl|jgi|Alide2_1638 note TIGRFAM: UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal type~KEGG: dia:Dtpsy_2383 UTP-glucose-1-phosphate uridylyltransferase~PFAM: Nucleotidyl transferase inference protein motif:TFAM:TIGR01099 db_xref GO:0003983 db_xref InterPro:IPR005771 db_xref InterPro:IPR005835 1733416 1730510 gene locus_tag Alide2_1639 1733416 1730510 CDS product Valyl-tRNA synthetase EC_number 6.1.1.9 transl_table 11 protein_id gb|AEB84030.1||gnl|jgi|Alide2_1639 note TIGRFAM: Valyl-tRNA synthetase~HAMAP: Valyl-tRNA synthetase~KEGG: ajs:Ajs_2896 valyl-tRNA synthetase inference protein motif:HAMAP:MF_02004 db_xref InterPro:IPR002300 db_xref InterPro:IPR002303 db_xref InterPro:IPR013155 db_xref InterPro:IPR019499 1734149 1733544 gene locus_tag Alide2_1640 1734149 1733544 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84031.1||gnl|jgi|Alide2_1640 note KEGG: pol:Bpro_1263 hypothetical protein inference similar to AA sequence:KEGG:Bpro_1263 1734781 1734146 gene locus_tag Alide2_1641 1734781 1734146 CDS product electron transport protein SCO1/SenC transl_table 11 protein_id gb|AEB84032.1||gnl|jgi|Alide2_1641 note PFAM: Copper chaperone SCO1/SenC~KEGG: net:Neut_1585 hypothetical protein inference protein motif:PFAM:PF02630 db_xref InterPro:IPR003782 1735382 1734789 gene locus_tag Alide2_1642 1735382 1734789 CDS product cytochrome c class I transl_table 11 protein_id gb|AEB84033.1||gnl|jgi|Alide2_1642 note PFAM: Cytochrome c, class I~KEGG: net:Neut_1584 cytochrome c, class I inference protein motif:PFAM:PF00034 db_xref GO:0005506 db_xref GO:0009055 db_xref GO:0020037 db_xref InterPro:IPR003088 1736043 1735396 gene locus_tag Alide2_1643 1736043 1735396 CDS product cytochrome C oxidase mono-heme subunit/FixO transl_table 11 protein_id gb|AEB84034.1||gnl|jgi|Alide2_1643 note PFAM: Cytochrome c oxidase, monohaem subunit/FixO~KEGG: net:Neut_1583 cytochrome c oxidase, mono-heme subunit/FixO inference protein motif:PFAM:PF02433 db_xref InterPro:IPR003468 1737688 1736033 gene locus_tag Alide2_1644 1737688 1736033 CDS product Cytochrome-c oxidase EC_number 1.9.3.1 transl_table 11 protein_id gb|AEB84035.1||gnl|jgi|Alide2_1644 note KEGG: net:Neut_1582 cytochrome c oxidase, subunit I~PFAM: Cytochrome c oxidase, subunit I inference protein motif:PRIAM:1.9.3.1 db_xref InterPro:IPR000883 1739231 1737942 gene locus_tag Alide2_1645 1739231 1737942 CDS product HemY domain protein transl_table 11 protein_id gb|AEB84036.1||gnl|jgi|Alide2_1645 note PFAM: HemY, N-terminal~KEGG: ajs:Ajs_2893 HemY domain-containing protein inference protein motif:PFAM:PF07219 db_xref InterPro:IPR010817 1740336 1739257 gene locus_tag Alide2_1646 1740336 1739257 CDS product hemX domain protein transl_table 11 protein_id gb|AEB84037.1||gnl|jgi|Alide2_1646 note PFAM: HemX~KEGG: ajs:Ajs_2892 protein of unknown function DUF513, HemX inference protein motif:PFAM:PF04375 db_xref InterPro:IPR007470 1741150 1740326 gene locus_tag Alide2_1647 1741150 1740326 CDS product uroporphyrinogen-III synthase transl_table 11 protein_id gb|AEB84038.1||gnl|jgi|Alide2_1647 note KEGG: ajs:Ajs_2891 uroporphyrinogen-III synthase inference similar to AA sequence:KEGG:Ajs_2891 1742073 1741144 gene locus_tag Alide2_1648 1742073 1741144 CDS product Porphobilinogen deaminase EC_number 2.5.1.61 transl_table 11 protein_id gb|AEB84039.1||gnl|jgi|Alide2_1648 note PFAM: Porphobilinogen deaminase, N-terminal; Porphobilinogen deaminase, C-terminal domain~TIGRFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase~HAMAP: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase~KEGG: dia:Dtpsy_2377 porphobilinogen deaminase inference protein motif:HAMAP:MF_00260 db_xref InterPro:IPR000860 db_xref InterPro:IPR022417 db_xref InterPro:IPR022418 1742193 1745036 gene locus_tag Alide2_1649 1742193 1745036 CDS product Phosphoenolpyruvate carboxylase EC_number 4.1.1.31 transl_table 11 protein_id gb|AEB84040.1||gnl|jgi|Alide2_1649 note KEGG: dia:Dtpsy_2376 phosphoenolpyruvate carboxylase~PFAM: Phosphoenolpyruvate carboxylase inference protein motif:PRIAM:4.1.1.31 db_xref InterPro:IPR003661 db_xref InterPro:IPR021135 1745608 1745069 gene locus_tag Alide2_1650 1745608 1745069 CDS product flagellar transcriptional activator FlhC transl_table 11 protein_id gb|AEB84041.1||gnl|jgi|Alide2_1650 note PFAM: Flagellar transcriptional activator FlhC~KEGG: ajs:Ajs_2885 transcriptional activator FlhC inference protein motif:PFAM:PF05280 db_xref GO:0003677 db_xref GO:0016563 db_xref InterPro:IPR007944 1745974 1745645 gene locus_tag Alide2_1651 1745974 1745645 CDS product flagellar transcriptional activator transl_table 11 protein_id gb|AEB84042.1||gnl|jgi|Alide2_1651 note PFAM: Flagellar transcriptional activator~KEGG: ajs:Ajs_2884 flagellar transcriptional activator, FlhD subunit inference protein motif:PFAM:PF05247 db_xref GO:0003677 db_xref GO:0016563 db_xref InterPro:IPR007911 1746677 1746201 gene locus_tag Alide2_1652 1746677 1746201 CDS product bacterioferritin transl_table 11 protein_id gb|AEB84043.1||gnl|jgi|Alide2_1652 note KEGG: dia:Dtpsy_2370 bacterioferritin~TIGRFAM: Bacterioferritin~PFAM: Ferritin/Dps protein inference protein motif:TFAM:TIGR00754 db_xref GO:0008199 db_xref InterPro:IPR002024 db_xref InterPro:IPR008331 1746893 1747468 gene locus_tag Alide2_1653 1746893 1747468 CDS product peroxiredoxin EC_number 1.11.1.15 transl_table 11 protein_id gb|AEB84044.1||gnl|jgi|Alide2_1653 note TIGRFAM: Peroxiredoxin~KEGG: xtr:100496295 alkyl hydroperoxide reductase subunit C-like~PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; Peroxiredoxin, C-terminal inference protein motif:TFAM:TIGR03137 db_xref GO:0051920 db_xref InterPro:IPR000866 db_xref InterPro:IPR017559 db_xref InterPro:IPR019479 1747564 1749132 gene locus_tag Alide2_1654 1747564 1749132 CDS product alkyl hydroperoxide reductase, F subunit EC_number 1.6.99.3 transl_table 11 protein_id gb|AEB84045.1||gnl|jgi|Alide2_1654 note TIGRFAM: Alkyl hydroperoxide reductase, subunit F~KEGG: xtr:100496451 alkyl hydroperoxide reductase subunit F-like~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Glutaredoxin inference protein motif:TFAM:TIGR03140 db_xref GO:0004418 db_xref GO:0050660 db_xref GO:0051287 db_xref InterPro:IPR002109 db_xref InterPro:IPR012081 db_xref InterPro:IPR013027 1749201 1750658 gene locus_tag Alide2_1655 1749201 1750658 CDS product Catalase EC_number 1.11.1.6 transl_table 11 protein_id gb|AEB84046.1||gnl|jgi|Alide2_1655 note KEGG: gpb:HDN1F_12050 catalase~PFAM: Catalase-related subgroup; Catalase-related immune responsive inference protein motif:PRIAM:1.11.1.6 db_xref InterPro:IPR010582 db_xref InterPro:IPR018028 1750714 1751091 gene locus_tag Alide2_1656 1750714 1751091 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84047.1||gnl|jgi|Alide2_1656 note KEGG: mpt:Mpe_A2670 hypothetical protein inference similar to AA sequence:KEGG:Mpe_A2670 1751273 1752541 gene locus_tag Alide2_1657 1751273 1752541 CDS product outer membrane efflux protein transl_table 11 protein_id gb|AEB84048.1||gnl|jgi|Alide2_1657 note PFAM: Outer membrane efflux protein~KEGG: ajs:Ajs_1332 outer membrane efflux protein inference protein motif:PFAM:PF02321 db_xref GO:0005215 db_xref InterPro:IPR003423 1752649 1753194 gene locus_tag Alide2_1658 1752649 1753194 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84049.1||gnl|jgi|Alide2_1658 note KEGG: dia:Dtpsy_1144 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_1144 1753191 1754303 gene locus_tag Alide2_1659 1753191 1754303 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84050.1||gnl|jgi|Alide2_1659 note KEGG: xtr:100489290 hypothetical protein LOC100489290 inference similar to AA sequence:KEGG:100489290 1754317 1757436 gene locus_tag Alide2_1660 1754317 1757436 CDS product heavy metal efflux pump, CzcA family transl_table 11 protein_id gb|AEB84051.1||gnl|jgi|Alide2_1660 note KEGG: tmz:Tmz1t_2382 heavy metal efflux pump, CzcA family~TIGRFAM: Heavy metal efflux pump CzcA~PFAM: Acriflavin resistance protein inference protein motif:TFAM:TIGR00914 db_xref GO:0008324 db_xref InterPro:IPR001036 db_xref InterPro:IPR004763 1758357 1757470 gene locus_tag Alide2_1661 1758357 1757470 CDS product phosphotransferase ydiA transl_table 11 protein_id gb|AEB84052.1||gnl|jgi|Alide2_1661 note KEGG: aav:Aave_1381 hypothetical protein~HAMAP: Protein of unknown function DUF299, phosphotransferase, predicted~PFAM: Protein of unknown function DUF299, phosphotransferase, predicted inference protein motif:HAMAP:MF_01062 db_xref InterPro:IPR005177 1758523 1760913 gene locus_tag Alide2_1662 1758523 1760913 CDS product phosphoenolpyruvate synthase EC_number 2.7.9.2 transl_table 11 protein_id gb|AEB84053.1||gnl|jgi|Alide2_1662 note TIGRFAM: Phosphoenolpyruvate synthase~KEGG: dia:Dtpsy_2366 phosphoenolpyruvate synthase~PFAM: Pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising enzyme, mobile domain; PEP-utilising enzyme inference protein motif:TFAM:TIGR01418 db_xref GO:0008324 db_xref InterPro:IPR000121 db_xref InterPro:IPR002192 db_xref InterPro:IPR006319 db_xref InterPro:IPR008279 1760930 1761247 gene locus_tag Alide2_1663 1760930 1761247 CDS product putative solute symporter protein transl_table 11 protein_id gb|AEB84054.1||gnl|jgi|Alide2_1663 note TIGRFAM: Sodium symporter small subunit, predicted~KEGG: ajs:Ajs_2878 hypothetical protein inference protein motif:TFAM:TIGR03647 db_xref InterPro:IPR019886 1761240 1763324 gene locus_tag Alide2_1664 1761240 1763324 CDS product putative sodium symporter protein transl_table 11 protein_id gb|AEB84055.1||gnl|jgi|Alide2_1664 note KEGG: dia:Dtpsy_2364 calcium-binding EF-hand-containing protein~TIGRFAM: Sodium/solute symporter, VC2705 subfamily~PFAM: Sodium/solute symporter inference protein motif:TFAM:TIGR03648 db_xref InterPro:IPR001734 db_xref InterPro:IPR019899 1763445 1763903 gene locus_tag Alide2_1665 1763445 1763903 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84056.1||gnl|jgi|Alide2_1665 note KEGG: ajs:Ajs_2876 hypothetical protein inference similar to AA sequence:KEGG:Ajs_2876 1765754 1763970 gene locus_tag Alide2_1666 1765754 1763970 CDS product Butyryl-CoA dehydrogenase EC_number 1.3.8.1 transl_table 11 protein_id gb|AEB84057.1||gnl|jgi|Alide2_1666 note KEGG: rpi:Rpic_2638 acyl-CoA dehydrogenase domain protein~PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal inference protein motif:PRIAM:1.3.99.2 db_xref InterPro:IPR006090 db_xref InterPro:IPR006091 db_xref InterPro:IPR006092 1766938 1765910 gene locus_tag Alide2_1667 1766938 1765910 CDS product transcriptional regulator, AraC family transl_table 11 protein_id gb|AEB84058.1||gnl|jgi|Alide2_1667 note KEGG: ppw:PputW619_3351 AraC family transcriptional regulator~PFAM: HTH transcriptional regulator, AraC~SMART: Helix-turn-helix, AraC type, DNA binding domain inference protein motif:PFAM:PF00165 db_xref GO:0003700 db_xref GO:0043565 db_xref InterPro:IPR000005 db_xref InterPro:IPR018060 1767282 1768496 gene locus_tag Alide2_1668 1767282 1768496 CDS product Extracellular ligand-binding receptor transl_table 11 protein_id gb|AEB84059.1||gnl|jgi|Alide2_1668 note PFAM: Extracellular ligand-binding receptor~KEGG: dac:Daci_0182 extracellular ligand-binding receptor inference protein motif:PFAM:PF01094 db_xref InterPro:IPR001828 1768531 1769676 gene locus_tag Alide2_1669 1768531 1769676 CDS product Long-chain-acyl-CoA dehydrogenase EC_number 1.3.99.13 transl_table 11 protein_id gb|AEB84060.1||gnl|jgi|Alide2_1669 note KEGG: rpi:Rpic_2632 acyl-CoA dehydrogenase domain protein~PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain inference protein motif:PRIAM:1.3.99.13 db_xref InterPro:IPR006090 db_xref InterPro:IPR006091 db_xref InterPro:IPR006092 1769673 1770752 gene locus_tag Alide2_1670 1769673 1770752 CDS product Alpha-methylacyl-CoA racemase EC_number 5.1.99.4 transl_table 11 protein_id gb|AEB84061.1||gnl|jgi|Alide2_1670 note KEGG: rpi:Rpic_2631 L-carnitine dehydratase/bile acid-inducible protein F~PFAM: CoA-transferase family III inference protein motif:PRIAM:5.1.99.4 db_xref InterPro:IPR003673 1770749 1772422 gene locus_tag Alide2_1671 1770749 1772422 CDS product o-succinylbenzoate--CoA ligase EC_number 6.2.1.26 transl_table 11 protein_id gb|AEB84062.1||gnl|jgi|Alide2_1671 note KEGG: rpi:Rpic_2630 AMP-dependent synthetase and ligase~PFAM: AMP-dependent synthetase/ligase inference protein motif:PRIAM:6.2.1.26 db_xref InterPro:IPR000873 1772470 1773666 gene locus_tag Alide2_1672 1772470 1773666 CDS product acetyl-CoA acetyltransferase EC_number 2.3.1.16 transl_table 11 protein_id gb|AEB84063.1||gnl|jgi|Alide2_1672 note TIGRFAM: Thiolase~KEGG: rpi:Rpic_2629 acetyl-CoA acetyltransferase~PFAM: Thiolase, N-terminal; Thiolase, C-terminal inference protein motif:TFAM:TIGR01930 db_xref GO:0008324 db_xref InterPro:IPR002155 db_xref InterPro:IPR020616 db_xref InterPro:IPR020617 1773663 1774439 gene locus_tag Alide2_1673 1773663 1774439 CDS product Enoyl-CoA hydratase/isomerase transl_table 11 protein_id gb|AEB84064.1||gnl|jgi|Alide2_1673 note PFAM: Crotonase, core~KEGG: rpi:Rpic_2628 enoyl-CoA hydratase/isomerase inference protein motif:PFAM:PF00378 db_xref GO:0003824 db_xref InterPro:IPR001753 1774471 1775253 gene locus_tag Alide2_1674 1774471 1775253 CDS product 3-hydroxy-2-methylbutyryl-CoA dehydrogenase EC_number 1.1.1.178 transl_table 11 protein_id gb|AEB84065.1||gnl|jgi|Alide2_1674 note KEGG: rpi:Rpic_2627 short-chain dehydrogenase/reductase SDR~PFAM: Short-chain dehydrogenase/reductase SDR inference protein motif:PRIAM:1.1.1.178 db_xref InterPro:IPR002198 1776496 1775420 gene locus_tag Alide2_1675 pseudo 1777191 1776637 gene locus_tag Alide2_1676 1777191 1776637 CDS product Elongation factor P transl_table 11 protein_id gb|AEB84066.1||gnl|jgi|Alide2_1676 note SMART: Elongation factor P, C-terminal~TIGRFAM: Translation elongation factor P~KEGG: xtr:100493038 elongation factor P-like~HAMAP: Translation elongation factor P~PFAM: Elongation factor P, C-terminal; Translation elongation factor, KOW-like; Translation elongation factor P/YeiP, central inference protein motif:HAMAP:MF_00141 db_xref InterPro:IPR001059 db_xref InterPro:IPR011768 db_xref InterPro:IPR013185 db_xref InterPro:IPR015365 1778433 1777351 gene locus_tag Alide2_1677 1778433 1777351 CDS product Uncharacterized conserved protein UCP015557 transl_table 11 protein_id gb|AEB84067.1||gnl|jgi|Alide2_1677 note KEGG: ajs:Ajs_2874 hypothetical protein~TIGRFAM: Uncharacterised conserved protein UCP015557~PFAM: Uncharacterised conserved protein UCP015557 inference protein motif:TFAM:TIGR03837 db_xref InterPro:IPR016633 1779332 1778430 gene locus_tag Alide2_1678 1779332 1778430 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB84068.1||gnl|jgi|Alide2_1678 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: ajs:Ajs_2873 LysR family transcriptional regulator inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 1779460 1780665 gene locus_tag Alide2_1679 1779460 1780665 CDS product Formyl-CoA transferase EC_number 2.8.3.16 transl_table 11 protein_id gb|AEB84069.1||gnl|jgi|Alide2_1679 note KEGG: dia:Dtpsy_2359 L-carnitine dehydratase/bile acid-inducible protein F~PFAM: CoA-transferase family III inference protein motif:PRIAM:2.8.3.16 db_xref InterPro:IPR003673 1780662 1781633 gene locus_tag Alide2_1680 1780662 1781633 CDS product Hydroxymethylglutaryl-CoA lyase EC_number 4.1.3.4 transl_table 11 protein_id gb|AEB84070.1||gnl|jgi|Alide2_1680 note KEGG: dia:Dtpsy_2358 pyruvate carboxyltransferase~PFAM: Pyruvate carboxyltransferase inference protein motif:PRIAM:4.1.3.4 db_xref InterPro:IPR000891 1781676 1782665 gene locus_tag Alide2_1681 1781676 1782665 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84071.1||gnl|jgi|Alide2_1681 note KEGG: dia:Dtpsy_2357 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_2357 db_xref InterPro:IPR005064 1782710 1783693 gene locus_tag Alide2_1682 1782710 1783693 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84072.1||gnl|jgi|Alide2_1682 note KEGG: ajs:Ajs_2869 hypothetical protein inference similar to AA sequence:KEGG:Ajs_2869 db_xref InterPro:IPR005064 1784654 1783728 gene locus_tag Alide2_1683 1784654 1783728 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB84073.1||gnl|jgi|Alide2_1683 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: ctt:CtCNB1_0157 L-carnitine dehydratase/bile acid-inducible inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 1784746 1785957 gene locus_tag Alide2_1684 1784746 1785957 CDS product Formyl-CoA transferase EC_number 2.8.3.16 transl_table 11 protein_id gb|AEB84074.1||gnl|jgi|Alide2_1684 note KEGG: xtr:100493857 uncharacterized protein yfdE-like~PFAM: CoA-transferase family III inference protein motif:PRIAM:2.8.3.16 db_xref InterPro:IPR003673 1785996 1787153 gene locus_tag Alide2_1685 1785996 1787153 CDS product Butyryl-CoA dehydrogenase EC_number 1.3.8.1 transl_table 11 protein_id gb|AEB84075.1||gnl|jgi|Alide2_1685 note KEGG: xtr:100494035 short-chain specific acyl-CoA dehydrogenase, mitochondrial-like~PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal inference protein motif:PRIAM:1.3.99.2 db_xref InterPro:IPR006090 db_xref InterPro:IPR006091 db_xref InterPro:IPR006092 1787361 1788326 gene locus_tag Alide2_1686 1787361 1788326 CDS product substrate-binding region of ABC-type glycine betaine transport system transl_table 11 protein_id gb|AEB84076.1||gnl|jgi|Alide2_1686 note KEGG: aav:Aave_2969 substrate-binding region of ABC-type glycine betaine transport system inference similar to AA sequence:KEGG:Aave_2969 db_xref InterPro:IPR015168 1788352 1789191 gene locus_tag Alide2_1687 1788352 1789191 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB84077.1||gnl|jgi|Alide2_1687 note PFAM: Binding-protein-dependent transport systems inner membrane component~KEGG: xtr:100494207 probable ABC transporter permease protein BruAb2_1124-like inference protein motif:PFAM:PF00528 db_xref GO:0005215 db_xref InterPro:IPR000515 1789191 1789973 gene locus_tag Alide2_1688 1789191 1789973 CDS product Taurine-transporting ATPase EC_number 3.6.3.36 transl_table 11 protein_id gb|AEB84078.1||gnl|jgi|Alide2_1688 note PFAM: ABC transporter-like~KEGG: xtr:100494366 uncharacterized ABC transporter ATP-binding protein MJ0412-like~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.36 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 1789990 1790772 gene locus_tag Alide2_1689 1789990 1790772 CDS product transcriptional regulator, GntR family with UTRA sensor domain transl_table 11 protein_id gb|AEB84079.1||gnl|jgi|Alide2_1689 note TIGRFAM: Histidine utilization repressor~PFAM: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR~KEGG: aav:Aave_2966 histidine utilization repressor~SMART: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR inference protein motif:TFAM:TIGR02018 db_xref GO:0003677 db_xref GO:0016564 db_xref InterPro:IPR000524 db_xref InterPro:IPR010248 db_xref InterPro:IPR011663 1790836 1792425 gene locus_tag Alide2_1690 1790836 1792425 CDS product Histidine ammonia-lyase EC_number 4.3.1.3 transl_table 11 protein_id gb|AEB84080.1||gnl|jgi|Alide2_1690 note PFAM: Phenylalanine/histidine ammonia-lyase~TIGRFAM: Histidine ammonia-lyase~HAMAP: Histidine ammonia-lyase~KEGG: aav:Aave_2965 histidine ammonia-lyase inference protein motif:HAMAP:MF_00229 db_xref InterPro:IPR001106 db_xref InterPro:IPR005921 1793151 1792426 gene locus_tag Alide2_1691 1793151 1792426 CDS product transcriptional regulator, GntR family with UTRA sensor domain transl_table 11 protein_id gb|AEB84081.1||gnl|jgi|Alide2_1691 note TIGRFAM: Histidine utilization repressor~PFAM: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR~KEGG: ctt:CtCNB1_0165 transcriptional regulator, histidine~SMART: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR inference protein motif:TFAM:TIGR02018 db_xref GO:0003677 db_xref GO:0016564 db_xref InterPro:IPR000524 db_xref InterPro:IPR010248 db_xref InterPro:IPR011663 1793294 1794772 gene locus_tag Alide2_1692 1793294 1794772 CDS product permease for cytosine/purines uracil thiamine allantoin transl_table 11 protein_id gb|AEB84082.1||gnl|jgi|Alide2_1692 note PFAM: Permease, cytosine/purines, uracil, thiamine, allantoin~KEGG: ctt:CtCNB1_0166 cytosine/purines/uracil permease inference protein motif:PFAM:PF02133 db_xref GO:0015205 db_xref InterPro:IPR001248 1794816 1796537 gene locus_tag Alide2_1693 1794816 1796537 CDS product urocanate hydratase EC_number 4.2.1.49 transl_table 11 protein_id gb|AEB84083.1||gnl|jgi|Alide2_1693 note TIGRFAM: Urocanase~KEGG: dac:Daci_0150 urocanate hydratase~PFAM: Urocanase inference protein motif:TFAM:TIGR01228 db_xref GO:0016153 db_xref InterPro:IPR000193 1796626 1797405 gene locus_tag Alide2_1694 1796626 1797405 CDS product transcriptional regulator, IclR family transl_table 11 protein_id gb|AEB84084.1||gnl|jgi|Alide2_1694 note KEGG: pol:Bpro_1041 IclR family transcriptional regulator~PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal~SMART: Transcription regulator IclR, N-terminal inference protein motif:PFAM:PF01614 db_xref GO:0003677 db_xref InterPro:IPR005471 db_xref InterPro:IPR014757 1797450 1798205 gene locus_tag Alide2_1695 1797450 1798205 CDS product ABC-type transporter, periplasmic subunit family 3 transl_table 11 protein_id gb|AEB84085.1||gnl|jgi|Alide2_1695 note KEGG: pol:Bpro_1040 extracellular solute-binding protein~PFAM: Extracellular solute-binding protein, family 3~SMART: Extracellular solute-binding protein, family 3; Ionotropic glutamate receptor inference protein motif:PFAM:PF00497 db_xref GO:0005215 db_xref InterPro:IPR001320 db_xref InterPro:IPR001638 1798220 1798888 gene locus_tag Alide2_1696 1798220 1798888 CDS product polar amino acid ABC transporter, inner membrane subunit transl_table 11 protein_id gb|AEB84086.1||gnl|jgi|Alide2_1696 note KEGG: pol:Bpro_1039 amino acid ABC transporter permease~TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family~PFAM: Binding-protein-dependent transport systems inner membrane component inference protein motif:TFAM:TIGR01726 db_xref GO:0005215 db_xref InterPro:IPR000515 db_xref InterPro:IPR010065 1798885 1799667 gene locus_tag Alide2_1697 1798885 1799667 CDS product Fe(3+)-transporting ATPase EC_number 3.6.3.30 transl_table 11 protein_id gb|AEB84087.1||gnl|jgi|Alide2_1697 note PFAM: ABC transporter-like~KEGG: pol:Bpro_1038 ABC transporter related~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.30 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 1799673 1800275 gene locus_tag Alide2_1698 1799673 1800275 CDS product HutD-family protein transl_table 11 protein_id gb|AEB84088.1||gnl|jgi|Alide2_1698 note PFAM: Uncharacterised protein family HutD~KEGG: aav:Aave_2962 hypothetical protein inference protein motif:PFAM:PF05962 db_xref InterPro:IPR010282 1800601 1801839 gene locus_tag Alide2_1699 1800601 1801839 CDS product imidazolonepropionase EC_number 3.5.2.7 transl_table 11 protein_id gb|AEB84089.1||gnl|jgi|Alide2_1699 note TIGRFAM: Imidazolonepropionase~KEGG: pol:Bpro_1035 imidazolonepropionase~PFAM: Amidohydrolase 1 inference protein motif:TFAM:TIGR01224 db_xref GO:0016887 db_xref InterPro:IPR005920 db_xref InterPro:IPR006680 1801844 1803277 gene locus_tag Alide2_1700 1801844 1803277 CDS product formiminoglutamate deiminase transl_table 11 protein_id gb|AEB84090.1||gnl|jgi|Alide2_1700 note KEGG: dac:Daci_0155 N-formimino-L-glutamate deiminase~TIGRFAM: Formiminoglutamate deiminase~PFAM: Amidohydrolase 1 inference protein motif:TFAM:TIGR02022 db_xref InterPro:IPR006680 db_xref InterPro:IPR010252 1803306 1804127 gene locus_tag Alide2_1701 1803306 1804127 CDS product N-formylglutamate amidohydrolase transl_table 11 protein_id gb|AEB84091.1||gnl|jgi|Alide2_1701 note KEGG: aav:Aave_2959 N-formylglutamate amidohydrolase~TIGRFAM: N-formylglutamate deformylase~PFAM: N-formylglutamate amidohydrolase inference protein motif:TFAM:TIGR02017 db_xref InterPro:IPR007709 db_xref InterPro:IPR010247 1804987 1804124 gene locus_tag Alide2_1702 1804987 1804124 CDS product glutamate racemase EC_number 5.1.1.3 transl_table 11 protein_id gb|AEB84092.1||gnl|jgi|Alide2_1702 note TIGRFAM: Glutamate racemase~KEGG: ajs:Ajs_2867 glutamate racemase~PFAM: Asp/Glu/hydantoin racemase inference protein motif:TFAM:TIGR00067 db_xref GO:0008881 db_xref InterPro:IPR004391 db_xref InterPro:IPR015942 1805651 1805028 gene locus_tag Alide2_1703 1805651 1805028 CDS product protein of unknown function DUF938 transl_table 11 protein_id gb|AEB84093.1||gnl|jgi|Alide2_1703 note PFAM: Protein of unknown function DUF938~KEGG: dia:Dtpsy_2352 protein of unknown function DUF938 inference protein motif:PFAM:PF06080 db_xref InterPro:IPR010342 1806655 1805852 gene locus_tag Alide2_1704 1806655 1805852 CDS product 4-hydroxy-2-oxovalerate aldolase EC_number 4.1.3.39 transl_table 11 protein_id gb|AEB84094.1||gnl|jgi|Alide2_1704 note KEGG: aav:Aave_2080 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase~PFAM: Aldehyde-lyase domain inference protein motif:PRIAM:4.1.3.39 db_xref InterPro:IPR005000 1808131 1806662 gene locus_tag Alide2_1705 1808131 1806662 CDS product succinic semialdehyde dehydrogenase EC_number 1.2.1.24 transl_table 11 protein_id gb|AEB84095.1||gnl|jgi|Alide2_1705 note TIGRFAM: Succinic semialdehyde dehydrogenase~KEGG: dac:Daci_2346 succinic semialdehyde dehydrogenase~PFAM: Aldehyde dehydrogenase domain inference protein motif:TFAM:TIGR01780 db_xref GO:0016153 db_xref InterPro:IPR010102 db_xref InterPro:IPR015590 1809721 1808198 gene locus_tag Alide2_1706 1809721 1808198 CDS product Galactarate dehydratase EC_number 4.2.1.42 transl_table 11 protein_id gb|AEB84096.1||gnl|jgi|Alide2_1706 note PFAM: D-galactarate dehydratase/Altronate hydrolase, C-terminal; SAF domain~KEGG: ctt:CtCNB1_3469 outer membrane protein precursor~SMART: SAF domain inference protein motif:PRIAM:4.2.1.42 db_xref InterPro:IPR007392 db_xref InterPro:IPR013974 1810707 1809718 gene locus_tag Alide2_1707 1810707 1809718 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84097.1||gnl|jgi|Alide2_1707 note KEGG: ctt:CtCNB1_3468 TctC inference similar to AA sequence:KEGG:CtCNB1_3468 db_xref InterPro:IPR005064 1810807 1811769 gene locus_tag Alide2_1708 1810807 1811769 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB84098.1||gnl|jgi|Alide2_1708 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: aav:Aave_2084 LysR family transcriptional regulator inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 1812790 1811771 gene locus_tag Alide2_1709 1812790 1811771 CDS product Patatin transl_table 11 protein_id gb|AEB84099.1||gnl|jgi|Alide2_1709 note PFAM: Patatin/Phospholipase A2-related~KEGG: dac:Daci_3706 patatin inference protein motif:PFAM:PF01734 db_xref InterPro:IPR002641 1814053 1812962 gene locus_tag Alide2_1710 1814053 1812962 CDS product tartrate dehydrogenase EC_number 4.1.1.73 transl_table 11 protein_id gb|AEB84100.1||gnl|jgi|Alide2_1710 note TIGRFAM: Tartrate dehydrogenase~KEGG: aav:Aave_2087 tartrate dehydrogenase~PFAM: Isocitrate/isopropylmalate dehydrogenase inference protein motif:TFAM:TIGR02089 db_xref GO:0009027 db_xref GO:0051287 db_xref InterPro:IPR001804 db_xref InterPro:IPR011829 1814094 1815050 gene locus_tag Alide2_1711 1814094 1815050 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB84101.1||gnl|jgi|Alide2_1711 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: dac:Daci_2361 LysR family transcriptional regulator inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 1816068 1815067 gene locus_tag Alide2_1712 1816068 1815067 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84102.1||gnl|jgi|Alide2_1712 note KEGG: dia:Dtpsy_0973 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_0973 1816277 1816137 gene locus_tag Alide2_1713 1816277 1816137 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84103.1||gnl|jgi|Alide2_1713 inference ab initio prediction:Prodigal:1.4 1816548 1816411 gene locus_tag Alide2_1714 1816548 1816411 CDS product transcriptional regulatory protein QseB transl_table 11 protein_id gb|AEB84104.1||gnl|jgi|Alide2_1714 note KEGG: abb:ABBFA_001155 transcriptional regulatory protein QseB inference similar to AA sequence:KEGG:ABBFA_001155 1816723 1817058 gene locus_tag Alide2_1715 1816723 1817058 CDS product histone family protein DNA-binding protein transl_table 11 protein_id gb|AEB84105.1||gnl|jgi|Alide2_1715 note KEGG: pol:Bpro_4958 histone-like DNA-binding protein~PFAM: Histone-like bacterial DNA-binding protein~SMART: Histone-like bacterial DNA-binding protein inference protein motif:PFAM:PF00216 db_xref GO:0003677 db_xref InterPro:IPR000119 1817156 1817638 gene locus_tag Alide2_1716 1817156 1817638 CDS product helix-turn-helix domain protein transl_table 11 protein_id gb|AEB84106.1||gnl|jgi|Alide2_1716 note KEGG: pol:Bpro_5021 XRE family transcriptional regulator~PFAM: Helix-turn-helix type 3~SMART: Helix-turn-helix type 3 inference protein motif:PFAM:PF01381 db_xref GO:0043565 db_xref InterPro:IPR001387 1818871 1817975 gene locus_tag Alide2_1717 1818871 1817975 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB84107.1||gnl|jgi|Alide2_1717 note KEGG: tmz:Tmz1t_1027 transcriptional regulator, LysR family~manually curated~PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 1819013 1818879 gene locus_tag Alide2_1718 pseudo 1819882 1819136 gene locus_tag Alide2_1719 1819882 1819136 CDS product acetoacetyl-CoA reductase EC_number 1.1.1.36 transl_table 11 protein_id gb|AEB84108.1||gnl|jgi|Alide2_1719 note SMART: Polyketide synthase/Fatty acid synthase, KR~TIGRFAM: Acetoacetyl-CoA reductase~KEGG: rme:Rmet_1333 acetoacetyl-CoA reductase~PFAM: Short-chain dehydrogenase/reductase SDR inference protein motif:TFAM:TIGR01829 db_xref GO:0018454 db_xref InterPro:IPR002198 db_xref InterPro:IPR011283 db_xref InterPro:IPR020842 1820336 1819893 gene locus_tag Alide2_1720 1820336 1819893 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84109.1||gnl|jgi|Alide2_1720 note KEGG: tmz:Tmz1t_1024 hypothetical protein inference similar to AA sequence:KEGG:Tmz1t_1024 1822205 1820445 gene locus_tag Alide2_1721 1822205 1820445 CDS product Poly-beta-hydroxybutyrate polymerase domain protein transl_table 11 protein_id gb|AEB84110.1||gnl|jgi|Alide2_1721 note PFAM: Poly-beta-hydroxybutyrate polymerase, N-terminal; Alpha/beta hydrolase fold-1~KEGG: tmz:Tmz1t_1023 poly-beta-hydroxybutyrate polymerase domain protein inference protein motif:PFAM:PF07167 db_xref GO:0008415 db_xref InterPro:IPR000073 db_xref InterPro:IPR010941 1822541 1823149 gene locus_tag Alide2_1722 1822541 1823149 CDS product regulatory protein TetR transl_table 11 protein_id gb|AEB84111.1||gnl|jgi|Alide2_1722 note PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal~KEGG: tmz:Tmz1t_1022 transcriptional regulator, TetR family inference protein motif:PFAM:PF00440 db_xref GO:0003700 db_xref InterPro:IPR001647 1823343 1823762 gene locus_tag Alide2_1723 1823343 1823762 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84112.1||gnl|jgi|Alide2_1723 note KEGG: tmz:Tmz1t_1021 hypothetical protein inference similar to AA sequence:KEGG:Tmz1t_1021 1823790 1824830 gene locus_tag Alide2_1724 1823790 1824830 CDS product secretion protein HlyD family protein transl_table 11 protein_id gb|AEB84113.1||gnl|jgi|Alide2_1724 note PFAM: Secretion protein HlyD~KEGG: tmz:Tmz1t_1020 hypothetical protein inference protein motif:PFAM:PF00529 db_xref GO:0008565 db_xref InterPro:IPR006143 1824832 1826604 gene locus_tag Alide2_1725 1824832 1826604 CDS product Monosaccharide-transporting ATPase EC_number 3.6.3.17 transl_table 11 protein_id gb|AEB84114.1||gnl|jgi|Alide2_1725 note PFAM: ABC transporter-like~KEGG: tmz:Tmz1t_1019 ABC transporter related~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.17 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 1826601 1827770 gene locus_tag Alide2_1726 1826601 1827770 CDS product ABC-2 type transporter transl_table 11 protein_id gb|AEB84115.1||gnl|jgi|Alide2_1726 note PFAM: ABC-2 type transporter~KEGG: tmz:Tmz1t_1018 ABC-2 type transporter inference protein motif:PFAM:PF01061 db_xref InterPro:IPR013525 1827775 1828893 gene locus_tag Alide2_1727 1827775 1828893 CDS product ABC-2 type transporter transl_table 11 protein_id gb|AEB84116.1||gnl|jgi|Alide2_1727 note PFAM: ABC-2 type transporter~KEGG: tmz:Tmz1t_1017 ABC-2 type transporter inference protein motif:PFAM:PF01061 db_xref InterPro:IPR013525 1828890 1830428 gene locus_tag Alide2_1728 1828890 1830428 CDS product RND efflux system, outer membrane lipoprotein, NodT family transl_table 11 protein_id gb|AEB84117.1||gnl|jgi|Alide2_1728 note KEGG: rme:Rmet_1267 RND efflux system outer membrane lipoprotein NodT~TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT~PFAM: Outer membrane efflux protein inference protein motif:TFAM:TIGR01845 db_xref GO:0005215 db_xref GO:0008289 db_xref InterPro:IPR003423 db_xref InterPro:IPR010131 1830449 1830652 gene locus_tag Alide2_1729 1830449 1830652 CDS product Protein of unknown function DUF2892 transl_table 11 protein_id gb|AEB84118.1||gnl|jgi|Alide2_1729 note PFAM: Protein of unknown function DUF2892~KEGG: tmz:Tmz1t_1015 hypothetical protein inference protein motif:PFAM:PF11127 db_xref InterPro:IPR021309 1830660 1832069 gene locus_tag Alide2_1730 1830660 1832069 CDS product beta-lactamase domain protein transl_table 11 protein_id gb|AEB84119.1||gnl|jgi|Alide2_1730 note KEGG: rme:Rmet_1266 beta-lactamase-like protein~PFAM: Beta-lactamase-like; RNA-metabolising metallo-beta-lactamase~SMART: Beta-lactamase-like inference protein motif:PFAM:PF00753 db_xref GO:0016787 db_xref InterPro:IPR001279 db_xref InterPro:IPR011108 1832069 1832935 gene locus_tag Alide2_1731 1832069 1832935 CDS product Conserved hypothetical protein CHP00730 transl_table 11 protein_id gb|AEB84120.1||gnl|jgi|Alide2_1731 note KEGG: rme:Rmet_1265 hypothetical protein~TIGRFAM: Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG~PFAM: Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG inference protein motif:TFAM:TIGR00730 db_xref InterPro:IPR005269 1832932 1834131 gene locus_tag Alide2_1732 1832932 1834131 CDS product Protein of unknown function DUF2219 transl_table 11 protein_id gb|AEB84121.1||gnl|jgi|Alide2_1732 note PFAM: Protein of unknown function DUF2219~KEGG: rme:Rmet_1261 hypothetical protein inference protein motif:PFAM:PF09982 db_xref InterPro:IPR018707 1834180 1834653 gene locus_tag Alide2_1733 1834180 1834653 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84122.1||gnl|jgi|Alide2_1733 note KEGG: tmz:Tmz1t_1007 hypothetical protein inference similar to AA sequence:KEGG:Tmz1t_1007 1835253 1834765 gene locus_tag Alide2_1734 pseudo 1835667 1836578 gene locus_tag Alide2_1735 1835667 1836578 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB84123.1||gnl|jgi|Alide2_1735 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: tmz:Tmz1t_1002 transcriptional regulator, LysR family inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 1837133 1837888 gene locus_tag Alide2_1736 1837133 1837888 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84124.1||gnl|jgi|Alide2_1736 note KEGG: tmz:Tmz1t_1001 hypothetical protein inference similar to AA sequence:KEGG:Tmz1t_1001 1838013 1838231 gene locus_tag Alide2_1737 1838013 1838231 CDS product phage transcriptional regulator, AlpA transl_table 11 protein_id gb|AEB84125.1||gnl|jgi|Alide2_1737 note PFAM: Prophage CP4-57 regulatory~KEGG: tmz:Tmz1t_1000 phage transcriptional regulator, AlpA inference protein motif:PFAM:PF05930 db_xref InterPro:IPR010260 1838272 1839138 gene locus_tag Alide2_1738 1838272 1839138 CDS product Cobyrinic acid ac-diamide synthase transl_table 11 protein_id gb|AEB84126.1||gnl|jgi|Alide2_1738 note PFAM: Cobyrinic acid a,c-diamide synthase~KEGG: tmz:Tmz1t_0999 cobyrinic acid ac-diamide synthase inference protein motif:PFAM:PF01656 db_xref InterPro:IPR002586 1839122 1839358 gene locus_tag Alide2_1739 1839122 1839358 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84127.1||gnl|jgi|Alide2_1739 note KEGG: tmz:Tmz1t_0998 hypothetical protein inference similar to AA sequence:KEGG:Tmz1t_0998 1839345 1840994 gene locus_tag Alide2_1740 1839345 1840994 CDS product Integrating conjugative element, PFGI-1, ParB transl_table 11 protein_id gb|AEB84128.1||gnl|jgi|Alide2_1740 note KEGG: tmz:Tmz1t_0997 hypothetical protein~manually curated~TIGRFAM: Integrating conjugative element, PFGI-1, ParB inference protein motif:TFAM:TIGR03764 db_xref InterPro:IPR022304 1841012 1841572 gene locus_tag Alide2_1741 1841012 1841572 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84129.1||gnl|jgi|Alide2_1741 note KEGG: mpt:Mpe_A2335 hypothetical protein inference similar to AA sequence:KEGG:Mpe_A2335 1841576 1842778 gene locus_tag Alide2_1742 1841576 1842778 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84130.1||gnl|jgi|Alide2_1742 note KEGG: mpt:Mpe_A2336 hypothetical protein inference similar to AA sequence:KEGG:Mpe_A2336 1844047 1842830 gene locus_tag Alide2_1743 1844047 1842830 CDS product hypothethical protein transl_table 11 protein_id gb|AEB84131.1||gnl|jgi|Alide2_1743 note KEGG: rsl:RPSI07_1104 hypothethical protein inference similar to AA sequence:KEGG:RPSI07_1104 1844284 1845072 gene locus_tag Alide2_1744 1844284 1845072 CDS product integrating conjugative element protein, PFL_4669 family transl_table 11 protein_id gb|AEB84132.1||gnl|jgi|Alide2_1744 note KEGG: mpt:Mpe_A2339 hypothetical protein~TIGRFAM: Integrating conjugative element protein, PFL4669~PFAM: Integrating conjugative element protein, PFL4669 inference protein motif:TFAM:TIGR03761 db_xref InterPro:IPR014996 1845069 1845617 gene locus_tag Alide2_1745 1845069 1845617 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84133.1||gnl|jgi|Alide2_1745 note KEGG: tmz:Tmz1t_0992 hypothetical protein inference similar to AA sequence:KEGG:Tmz1t_0992 1845614 1845997 gene locus_tag Alide2_1746 1845614 1845997 CDS product single-strand binding protein/Primosomal replication protein n transl_table 11 protein_id gb|AEB84134.1||gnl|jgi|Alide2_1746 note PFAM: Primosome PriB/single-strand DNA-binding~KEGG: tmz:Tmz1t_0991 single-stranded DNA-binding protein inference protein motif:PFAM:PF00436 db_xref GO:0003697 db_xref InterPro:IPR000424 1846291 1848306 gene locus_tag Alide2_1747 1846291 1848306 CDS product DNA topoisomerase III EC_number 5.99.1.2 transl_table 11 protein_id gb|AEB84135.1||gnl|jgi|Alide2_1747 note SMART: DNA topoisomerase, type IA, DNA-binding; DNA topoisomerase, type IA, domain 2; Toprim domain~TIGRFAM: DNA topoisomerase III, bacterial-type~KEGG: mpt:Mpe_A2342 DNA topoisomerase III~PFAM: DNA topoisomerase, type IA, central; Toprim domain; DNA topoisomerase, type IA, zn finger inference protein motif:TFAM:TIGR01056 db_xref GO:0003677 db_xref GO:0003916 db_xref InterPro:IPR003601 db_xref InterPro:IPR003602 db_xref InterPro:IPR005738 db_xref InterPro:IPR006171 db_xref InterPro:IPR013497 db_xref InterPro:IPR013498 1849086 1849322 gene locus_tag Alide2_1748 1849086 1849322 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84136.1||gnl|jgi|Alide2_1748 note KEGG: tmz:Tmz1t_0989 hypothetical protein inference similar to AA sequence:KEGG:Tmz1t_0989 1849348 1849740 gene locus_tag Alide2_1749 1849348 1849740 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84137.1||gnl|jgi|Alide2_1749 note KEGG: ajs:Ajs_2230 hypothetical protein inference similar to AA sequence:KEGG:Ajs_2230 1849991 1850707 gene locus_tag Alide2_1750 1849991 1850707 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84138.1||gnl|jgi|Alide2_1750 note KEGG: ajs:Ajs_2229 hypothetical protein inference similar to AA sequence:KEGG:Ajs_2229 1850998 1851798 gene locus_tag Alide2_1751 1850998 1851798 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84139.1||gnl|jgi|Alide2_1751 note KEGG: tmz:Tmz1t_0980 hypothetical protein inference similar to AA sequence:KEGG:Tmz1t_0980 1851865 1852227 gene locus_tag Alide2_1752 1851865 1852227 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84140.1||gnl|jgi|Alide2_1752 note KEGG: tmz:Tmz1t_0979 hypothetical protein inference similar to AA sequence:KEGG:Tmz1t_0979 1852572 1853123 gene locus_tag Alide2_1753 1852572 1853123 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84141.1||gnl|jgi|Alide2_1753 note KEGG: mpt:Mpe_A2362 hypothetical protein inference similar to AA sequence:KEGG:Mpe_A2362 1853178 1853789 gene locus_tag Alide2_1754 1853178 1853789 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84142.1||gnl|jgi|Alide2_1754 note KEGG: mpt:Mpe_A2363 hypothetical protein inference similar to AA sequence:KEGG:Mpe_A2363 1853878 1854243 gene locus_tag Alide2_1755 1853878 1854243 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84143.1||gnl|jgi|Alide2_1755 note KEGG: mpt:Mpe_A2364 hypothetical protein inference similar to AA sequence:KEGG:Mpe_A2364 1854328 1854978 gene locus_tag Alide2_1756 1854328 1854978 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84144.1||gnl|jgi|Alide2_1756 note KEGG: tmz:Tmz1t_0975 hypothetical protein inference similar to AA sequence:KEGG:Tmz1t_0975 1855044 1856153 gene locus_tag Alide2_1757 1855044 1856153 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84145.1||gnl|jgi|Alide2_1757 note KEGG: tmz:Tmz1t_0974 hypothetical protein inference similar to AA sequence:KEGG:Tmz1t_0974 1856255 1856560 gene locus_tag Alide2_1758 1856255 1856560 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84146.1||gnl|jgi|Alide2_1758 note KEGG: ajs:Ajs_2221 hypothetical protein inference similar to AA sequence:KEGG:Ajs_2221 1856661 1858931 gene locus_tag Alide2_1759 1856661 1858931 CDS product DEAD-like helicase transl_table 11 protein_id gb|AEB84147.1||gnl|jgi|Alide2_1759 note SMART: DEAD-like helicase, N-terminal~KEGG: tmz:Tmz1t_0972 DEAD-like helicase inference protein motif:SMART:SM00487 db_xref InterPro:IPR014001 1859127 1858984 gene locus_tag Alide2_1760 pseudo 1859238 1860182 gene locus_tag Alide2_1761 1859238 1860182 CDS product Chromate resistance exported protein transl_table 11 protein_id gb|AEB84148.1||gnl|jgi|Alide2_1761 note PFAM: Chromate resistance exported protein~KEGG: har:HEAR0891 putative chromate resistance protein inference protein motif:PFAM:PF09828 db_xref InterPro:IPR018634 1860236 1861411 gene locus_tag Alide2_1762 1860236 1861411 CDS product chromate transporter, chromate ion transporter (CHR) family transl_table 11 protein_id gb|AEB84149.1||gnl|jgi|Alide2_1762 note KEGG: sfu:Sfum_0092 chromate transporter~TIGRFAM: Chromate transporter, long chain~PFAM: Chromate transporter inference protein motif:TFAM:TIGR00937 db_xref InterPro:IPR003370 db_xref InterPro:IPR014047 1861471 1862064 gene locus_tag Alide2_1763 1861471 1862064 CDS product Manganese/iron superoxide dismutase transl_table 11 protein_id gb|AEB84150.1||gnl|jgi|Alide2_1763 note PFAM: Manganese/iron superoxide dismutase, C-terminal~KEGG: rme:Rmet_6201 manganese and iron superoxide dismutase inference protein motif:PFAM:PF02777 db_xref GO:0004784 db_xref GO:0046872 db_xref InterPro:IPR019832 1863044 1862139 gene locus_tag Alide2_1764 1863044 1862139 CDS product Integrase catalytic region transl_table 11 protein_id gb|AEB84151.1||gnl|jgi|Alide2_1764 note PFAM: Integrase, catalytic core~KEGG: xom:XOO_1208 transposase inference protein motif:PFAM:PF00665 db_xref GO:0003677 db_xref InterPro:IPR001584 1863364 1863041 gene locus_tag Alide2_1765 1863364 1863041 CDS product transposase IS3/IS911 family protein transl_table 11 protein_id gb|AEB84152.1||gnl|jgi|Alide2_1765 note PFAM: Transposase IS3/IS911family~KEGG: azl:AZL_f00580 transposase inference protein motif:PFAM:PF01527 db_xref GO:0003677 db_xref GO:0004803 db_xref InterPro:IPR002514 1863505 1864407 gene locus_tag Alide2_1766 1863505 1864407 CDS product protein of unknown function LppY and LpqO transl_table 11 protein_id gb|AEB84153.1||gnl|jgi|Alide2_1766 note PFAM: Uncharacterised protein family, LppY/LpqO~KEGG: pop:POPTR_594759 hypothetical protein inference protein motif:PFAM:PF07485 db_xref InterPro:IPR011094 1864509 1864964 gene locus_tag Alide2_1767 1864509 1864964 CDS product Chromate resistance exported protein transl_table 11 protein_id gb|AEB84154.1||gnl|jgi|Alide2_1767 note PFAM: Chromate resistance exported protein~KEGG: bph:Bphy_5141 ChrB protein inference protein motif:PFAM:PF09828 db_xref InterPro:IPR018634 1864964 1866178 gene locus_tag Alide2_1768 1864964 1866178 CDS product major facilitator superfamily MFS_1 transl_table 11 protein_id gb|AEB84155.1||gnl|jgi|Alide2_1768 note PFAM: Major facilitator superfamily MFS-1~KEGG: vap:Vapar_6018 major facilitator superfamily MFS_1 inference protein motif:PFAM:PF07690 db_xref InterPro:IPR011701 1866286 1866969 gene locus_tag Alide2_1769 1866286 1866969 CDS product two component transcriptional regulator, winged helix family transl_table 11 protein_id gb|AEB84156.1||gnl|jgi|Alide2_1769 note KEGG: gbm:Gbem_2672 winged-helix transcriptional response regulator~PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal~SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal inference protein motif:PFAM:PF00072 db_xref GO:0000156 db_xref GO:0003677 db_xref InterPro:IPR001789 db_xref InterPro:IPR001867 1866966 1868420 gene locus_tag Alide2_1770 1866966 1868420 CDS product heavy metal sensor signal transduction histidine kinase transl_table 11 protein_id gb|AEB84157.1||gnl|jgi|Alide2_1770 note TIGRFAM: Signal transduction histidine kinase, heavy metal sensor~PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain~KEGG: gbm:Gbem_2673 HAMP domain-containing sensor histidine kinase~SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain inference protein motif:TFAM:TIGR01386 db_xref GO:0000155 db_xref GO:0004673 db_xref InterPro:IPR003594 db_xref InterPro:IPR003660 db_xref InterPro:IPR003661 db_xref InterPro:IPR006290 1868417 1869505 gene locus_tag Alide2_1771 1868417 1869505 CDS product NHL repeat containing protein transl_table 11 protein_id gb|AEB84158.1||gnl|jgi|Alide2_1771 note PFAM: NHL repeat~KEGG: phe:Phep_1359 NHL repeat containing protein inference protein motif:PFAM:PF01436 db_xref InterPro:IPR001258 1869543 1869809 gene locus_tag Alide2_1772 1869543 1869809 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84159.1||gnl|jgi|Alide2_1772 note KEGG: nwa:Nwat_1254 hypothetical protein inference similar to AA sequence:KEGG:Nwat_1254 1869806 1870522 gene locus_tag Alide2_1773 1869806 1870522 CDS product ABC transporter related protein transl_table 11 protein_id gb|AEB84160.1||gnl|jgi|Alide2_1773 note KEGG: mno:Mnod_2229 ABC transporter related~PFAM: ABC transporter-like~SMART: ATPase, AAA+ type, core inference protein motif:PFAM:PF00005 db_xref GO:0005524 db_xref GO:0016887 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 1870689 1871975 gene locus_tag Alide2_1774 1870689 1871975 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84161.1||gnl|jgi|Alide2_1774 note KEGG: bvi:Bcep1808_7485 hypothetical protein inference similar to AA sequence:KEGG:Bcep1808_7485 1871972 1872679 gene locus_tag Alide2_1775 1871972 1872679 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84162.1||gnl|jgi|Alide2_1775 note KEGG: mno:Mnod_2227 hypothetical protein inference similar to AA sequence:KEGG:Mnod_2227 1872692 1873531 gene locus_tag Alide2_1776 1872692 1873531 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84163.1||gnl|jgi|Alide2_1776 note KEGG: bvi:Bcep1808_7486 hypothetical protein inference similar to AA sequence:KEGG:Bcep1808_7486 1873887 1873558 gene locus_tag Alide2_1777 pseudo 1874184 1874744 gene locus_tag Alide2_1778 1874184 1874744 CDS product Integrating conjugative element protein PilL, PFGI-1 transl_table 11 protein_id gb|AEB84164.1||gnl|jgi|Alide2_1778 note TIGRFAM: Integrating conjugative element protein PilL, PFGI-1~KEGG: tmz:Tmz1t_0968 hypothetical protein inference protein motif:TFAM:TIGR03748 db_xref InterPro:IPR022260 1874741 1875388 gene locus_tag Alide2_1779 1874741 1875388 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84165.1||gnl|jgi|Alide2_1779 note KEGG: mpt:Mpe_A2376 hypothetical protein inference similar to AA sequence:KEGG:Mpe_A2376 1875398 1876117 gene locus_tag Alide2_1780 1875398 1876117 CDS product integrating conjugative element protein, PFL_4693 family transl_table 11 protein_id gb|AEB84166.1||gnl|jgi|Alide2_1780 note TIGRFAM: Integrating conjugative element protein, PFL4693~KEGG: ajs:Ajs_2211 putative secreted protein inference protein motif:TFAM:TIGR03759 db_xref InterPro:IPR022293 1876102 1876722 gene locus_tag Alide2_1781 1876102 1876722 CDS product Lytic transglycosylase catalytic transl_table 11 protein_id gb|AEB84167.1||gnl|jgi|Alide2_1781 note PFAM: Lytic transglycosylase-like, catalytic~KEGG: mpt:Mpe_A2378 hypothetical protein inference protein motif:PFAM:PF01464 db_xref InterPro:IPR008258 1876719 1877252 gene locus_tag Alide2_1782 1876719 1877252 CDS product integrating conjugative element protein, PFL_4695 family transl_table 11 protein_id gb|AEB84168.1||gnl|jgi|Alide2_1782 note TIGRFAM: Integrating conjugative element protein, PFL4695~KEGG: mpt:Mpe_A2379 hypothetical protein inference protein motif:TFAM:TIGR03765 db_xref InterPro:IPR021300 1877261 1879417 gene locus_tag Alide2_1783 1877261 1879417 CDS product conjugative coupling factor TraD, SXT/TOL subfamily transl_table 11 protein_id gb|AEB84169.1||gnl|jgi|Alide2_1783 note KEGG: tmz:Tmz1t_0963 hypothetical protein~manually curated~TIGRFAM: Conjugative coupling factor TraG/TraD; Conjugative coupling factor TraG/TraD, PFGI-1 inference protein motif:TFAM:TIGR03743 db_xref InterPro:IPR022458 db_xref InterPro:IPR022503 1879414 1880163 gene locus_tag Alide2_1784 1879414 1880163 CDS product integrating conjugative element membrane protein, PFL_4697 family transl_table 11 protein_id gb|AEB84170.1||gnl|jgi|Alide2_1784 note TIGRFAM: Integrating conjugative element protein, PFL4697, membrane~KEGG: mpt:Mpe_A2381 hypothetical protein inference protein motif:TFAM:TIGR03747 db_xref InterPro:IPR022266 1882836 1880209 gene locus_tag Alide2_1785 1882836 1880209 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84171.1||gnl|jgi|Alide2_1785 note KEGG: cli:Clim_0127 hypothetical protein inference similar to AA sequence:KEGG:Clim_0127 1885685 1882947 gene locus_tag Alide2_1786 1885685 1882947 CDS product type III restriction protein res subunit transl_table 11 protein_id gb|AEB84172.1||gnl|jgi|Alide2_1786 note PFAM: Restriction endonuclease, type I, R subunit/Type III, Res subunit~KEGG: eba:ebA2417 hypothetical protein inference protein motif:PFAM:PF04851 db_xref GO:0003677 db_xref GO:0005524 db_xref GO:0016787 db_xref InterPro:IPR006935 1887391 1885685 gene locus_tag Alide2_1787 1887391 1885685 CDS product DNA methylase N-4/N-6 domain protein transl_table 11 protein_id gb|AEB84173.1||gnl|jgi|Alide2_1787 note PFAM: DNA methylase N-4/N-6~KEGG: bpm:BURPS1710b_3656 adenine specific DNA methylase Mod inference protein motif:PFAM:PF01555 db_xref GO:0003677 db_xref GO:0008170 db_xref InterPro:IPR002941 1889192 1887402 gene locus_tag Alide2_1788 1889192 1887402 CDS product Abortive phage infection protein transl_table 11 protein_id gb|AEB84174.1||gnl|jgi|Alide2_1788 note PFAM: Abortive phage infection~KEGG: pph:Ppha_0341 hypothetical protein inference protein motif:PFAM:PF10592 db_xref InterPro:IPR018891 1891390 1889192 gene locus_tag Alide2_1789 1891390 1889192 CDS product peptidase S8 and S53 subtilisin kexin sedolisin transl_table 11 protein_id gb|AEB84175.1||gnl|jgi|Alide2_1789 note PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin~KEGG: alv:Alvin_2786 peptidase S8 and S53 subtilisin kexin sedolisin inference protein motif:PFAM:PF00082 db_xref GO:0004252 db_xref InterPro:IPR000209 1892541 1891555 gene locus_tag Alide2_1790 1892541 1891555 CDS product AAA ATPase central domain protein transl_table 11 protein_id gb|AEB84176.1||gnl|jgi|Alide2_1790 note KEGG: alv:Alvin_2785 AAA ATPase central domain-containing protein~PFAM: ATPase, AAA-type, core~SMART: ATPase, AAA+ type, core inference protein motif:PFAM:PF00004 db_xref GO:0005524 db_xref InterPro:IPR003593 db_xref InterPro:IPR003959 1895501 1892622 gene locus_tag Alide2_1791 1895501 1892622 CDS product SNF2-related protein transl_table 11 protein_id gb|AEB84177.1||gnl|jgi|Alide2_1791 note manually curated~PFAM: SNF2-related; Helicase, C-terminal~KEGG: tbd:Tbd_0933 DEAD/DEAH box helicase~SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal inference protein motif:PFAM:PF00176 db_xref GO:0003676 db_xref GO:0003677 db_xref GO:0004386 db_xref GO:0005524 db_xref InterPro:IPR000330 db_xref InterPro:IPR001650 db_xref InterPro:IPR014001 1895760 1895560 gene locus_tag Alide2_1792 1895760 1895560 CDS product DNA binding domain protein, excisionase family transl_table 11 protein_id gb|AEB84178.1||gnl|jgi|Alide2_1792 note KEGG: ajs:Ajs_2531 phage transcriptional regulator, AlpA~TIGRFAM: Excisionase/Xis, DNA-binding~PFAM: Prophage CP4-57 regulatory inference protein motif:TFAM:TIGR01764 db_xref GO:0003677 db_xref InterPro:IPR010093 db_xref InterPro:IPR010260 1895984 1896349 gene locus_tag Alide2_1793 1895984 1896349 CDS product Protein of unknown function, RAQPRD transl_table 11 protein_id gb|AEB84179.1||gnl|jgi|Alide2_1793 note KEGG: tmz:Tmz1t_0956 hypothetical protein~TIGRFAM: Uncharacterised protein family, RAQPRD~PFAM: Uncharacterised protein family, RAQPRD inference protein motif:TFAM:TIGR01690 db_xref InterPro:IPR019110 1896346 1896585 gene locus_tag Alide2_1794 1896346 1896585 CDS product integrating conjugative element protein, PFL_4701 family transl_table 11 protein_id gb|AEB84180.1||gnl|jgi|Alide2_1794 note TIGRFAM: Protein of unknown function DUF3262~KEGG: ajs:Ajs_2193 hypothetical protein inference protein motif:TFAM:TIGR03758 db_xref InterPro:IPR021676 1896608 1896976 gene locus_tag Alide2_1795 1896608 1896976 CDS product integrating conjugative element membrane protein, PFL_4702 family transl_table 11 protein_id gb|AEB84181.1||gnl|jgi|Alide2_1795 note TIGRFAM: Integrating conjugative element protein PFL4702~KEGG: tmz:Tmz1t_0954 hypothetical protein inference protein motif:TFAM:TIGR03745 db_xref InterPro:IPR021356 1896989 1897399 gene locus_tag Alide2_1796 1896989 1897399 CDS product conjugative transfer region protein, TIGR03750 family transl_table 11 protein_id gb|AEB84182.1||gnl|jgi|Alide2_1796 note TIGRFAM: Protein of unknown function DUF3487~KEGG: ajs:Ajs_2191 hypothetical protein inference protein motif:TFAM:TIGR03750 db_xref InterPro:IPR021877 1897396 1898088 gene locus_tag Alide2_1797 1897396 1898088 CDS product integrating conjugative element protein, PFL_4703 family transl_table 11 protein_id gb|AEB84183.1||gnl|jgi|Alide2_1797 note TIGRFAM: Protein of unknown function DUF2895~KEGG: mpt:Mpe_A2390 hypothetical protein inference protein motif:TFAM:TIGR03746 db_xref InterPro:IPR021548 1898085 1898999 gene locus_tag Alide2_1798 1898085 1898999 CDS product integrating conjugative element protein, PFL_4704 family transl_table 11 protein_id gb|AEB84184.1||gnl|jgi|Alide2_1798 note TIGRFAM: Integrating conjugative element protein, PFL4704~KEGG: ajs:Ajs_2189 hypothetical protein inference protein motif:TFAM:TIGR03749 db_xref InterPro:IPR021844 1898989 1900422 gene locus_tag Alide2_1799 1898989 1900422 CDS product integrating conjugative element protein, PFL_4705 family transl_table 11 protein_id gb|AEB84185.1||gnl|jgi|Alide2_1799 note TIGRFAM: Integrating conjugative element protein, PFL4705~KEGG: mpt:Mpe_A2392 hypothetical protein inference protein motif:TFAM:TIGR03752 db_xref InterPro:IPR021207 1900403 1900837 gene locus_tag Alide2_1800 1900403 1900837 CDS product conjugative transfer region lipoprotein, TIGR03751 family transl_table 11 protein_id gb|AEB84186.1||gnl|jgi|Alide2_1800 note TIGRFAM: Conjugative transfer region lipoprotein~KEGG: mpt:Mpe_A2393 hypothetical protein inference protein motif:TFAM:TIGR03751 db_xref InterPro:IPR022262 1900837 1903725 gene locus_tag Alide2_1801 1900837 1903725 CDS product conjugative transfer ATPase, PFL_4706 family transl_table 11 protein_id gb|AEB84187.1||gnl|jgi|Alide2_1801 note TIGRFAM: Conjugative transfer ATPase, PFL4706~KEGG: tmz:Tmz1t_0948 hypothetical protein inference protein motif:TFAM:TIGR03744 db_xref InterPro:IPR022303 1903739 1904482 gene locus_tag Alide2_1802 1903739 1904482 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84188.1||gnl|jgi|Alide2_1802 note KEGG: tmz:Tmz1t_0947 hypothetical protein inference similar to AA sequence:KEGG:Tmz1t_0947 1904678 1905172 gene locus_tag Alide2_1803 1904678 1905172 CDS product DNA repair protein RadC transl_table 11 protein_id gb|AEB84189.1||gnl|jgi|Alide2_1803 note KEGG: ajs:Ajs_2184 DNA repair protein RadC~TIGRFAM: Uncharacterised protein family UPF0758~PFAM: Uncharacterised protein family UPF0758 inference protein motif:TFAM:TIGR00608 db_xref InterPro:IPR001405 1905395 1905871 gene locus_tag Alide2_1804 1905395 1905871 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84190.1||gnl|jgi|Alide2_1804 note KEGG: app:CAP2UW1_2945 hypothetical protein inference similar to AA sequence:KEGG:CAP2UW1_2945 1905868 1908831 gene locus_tag Alide2_1805 1905868 1908831 CDS product N-6 DNA methylase transl_table 11 protein_id gb|AEB84191.1||gnl|jgi|Alide2_1805 note KEGG: app:CAP2UW1_2946 N-6 DNA methylase inference similar to AA sequence:KEGG:CAP2UW1_2946 1908981 1909499 gene locus_tag Alide2_1806 1908981 1909499 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84192.1||gnl|jgi|Alide2_1806 note KEGG: app:CAP2UW1_2947 hypothetical protein inference similar to AA sequence:KEGG:CAP2UW1_2947 1909643 1910086 gene locus_tag Alide2_1807 1909643 1910086 CDS product integrating conjugative element protein, PFL_4709 family transl_table 11 protein_id gb|AEB84193.1||gnl|jgi|Alide2_1807 note KEGG: ajs:Ajs_2183 hypothetical protein~TIGRFAM: Integrating conjugative element protein, PFL4709~PFAM: Integrating conjugative element protein, PFL4709 inference protein motif:TFAM:TIGR03757 db_xref InterPro:IPR011090 1910083 1911027 gene locus_tag Alide2_1808 1910083 1911027 CDS product integrating conjugative element protein, PFL_4710 family transl_table 11 protein_id gb|AEB84194.1||gnl|jgi|Alide2_1808 note KEGG: eba:ebA2511 hypothetical protein~TIGRFAM: Integrating conjugative element protein, PFL4710~PFAM: Integrating conjugative element protein, PFL4710 inference protein motif:TFAM:TIGR03756 db_xref InterPro:IPR011092 1911038 1912444 gene locus_tag Alide2_1809 1911038 1912444 CDS product integrating conjugative element protein, PFL_4711 family transl_table 11 protein_id gb|AEB84195.1||gnl|jgi|Alide2_1809 note TIGRFAM: Integrating conjugative element protein, PFL4711~KEGG: ajs:Ajs_2181 hypothetical protein inference protein motif:TFAM:TIGR03755 db_xref InterPro:IPR021204 1912441 1912794 gene locus_tag Alide2_1810 1912441 1912794 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84196.1||gnl|jgi|Alide2_1810 note KEGG: ajs:Ajs_2180 hypothetical protein inference similar to AA sequence:KEGG:Ajs_2180 1912810 1914333 gene locus_tag Alide2_1811 1912810 1914333 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84197.1||gnl|jgi|Alide2_1811 note KEGG: ajs:Ajs_2179 hypothetical protein inference similar to AA sequence:KEGG:Ajs_2179 1914718 1914350 gene locus_tag Alide2_1812 1914718 1914350 CDS product Protein of unknown function DUF3742 transl_table 11 protein_id gb|AEB84198.1||gnl|jgi|Alide2_1812 note PFAM: Protein of unknown function DUF3742~KEGG: ajs:Ajs_2178 hypothetical protein inference protein motif:PFAM:PF12553 db_xref InterPro:IPR022213 1914948 1915706 gene locus_tag Alide2_1813 1914948 1915706 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84199.1||gnl|jgi|Alide2_1813 note KEGG: mpt:Mpe_A2403 hypothetical protein inference similar to AA sequence:KEGG:Mpe_A2403 1915699 1916619 gene locus_tag Alide2_1814 1915699 1916619 CDS product Domain of unknown function DUF1814 transl_table 11 protein_id gb|AEB84200.1||gnl|jgi|Alide2_1814 note PFAM: Protein of unknown function DUF1814~KEGG: ajs:Ajs_2176 hypothetical protein inference protein motif:PFAM:PF08843 db_xref InterPro:IPR014942 1916822 1918666 gene locus_tag Alide2_1815 1916822 1918666 CDS product integrating conjugative element relaxase, PFGI-1 class transl_table 11 protein_id gb|AEB84201.1||gnl|jgi|Alide2_1815 note KEGG: ajs:Ajs_2175 relaxase~TIGRFAM: Integrating conjugative element relaxase, PFGI-1 class~PFAM: Uncharacterised protein family, helicase/relaxase, putative; Domain of unknown function DUF1528, C-terminal inference protein motif:TFAM:TIGR03760 db_xref InterPro:IPR011093 db_xref InterPro:IPR011119 db_xref InterPro:IPR022391 1918992 1918693 gene locus_tag Alide2_1816 1918992 1918693 CDS product helix-turn-helix domain protein transl_table 11 protein_id gb|AEB84202.1||gnl|jgi|Alide2_1816 note KEGG: mpt:Mpe_A2406 hypothetical protein~PFAM: Helix-turn-helix type 3~SMART: Helix-turn-helix type 3 inference protein motif:PFAM:PF01381 db_xref GO:0043565 db_xref InterPro:IPR001387 1919098 1919724 gene locus_tag Alide2_1817 1919098 1919724 CDS product LysR substrate-binding protein transl_table 11 protein_id gb|AEB84203.1||gnl|jgi|Alide2_1817 note PFAM: LysR, substrate-binding~KEGG: mpt:Mpe_A2407 transcriptional regulator inference protein motif:PFAM:PF03466 db_xref InterPro:IPR005119 1919902 1919738 gene locus_tag Alide2_1818 pseudo 1920985 1919906 gene locus_tag Alide2_1819 1920985 1919906 CDS product Lipoprotein signal peptidase transl_table 11 protein_id gb|AEB84204.1||gnl|jgi|Alide2_1819 note SMART: Phosphatidic acid phosphatase type 2/haloperoxidase~TIGRFAM: Peptidase A8, signal peptidase II~KEGG: kpu:pK2044_00535 lipoprotein signal peptidase~HAMAP: Peptidase A8, signal peptidase II~PFAM: Peptidase A8, signal peptidase II; Phosphatidic acid phosphatase type 2/haloperoxidase inference protein motif:HAMAP:MF_00161 db_xref InterPro:IPR000326 db_xref InterPro:IPR001872 1923384 1920982 gene locus_tag Alide2_1820 1923384 1920982 CDS product heavy metal translocating P-type ATPase EC_number 3.6.3.3 transl_table 11 protein_id gb|AEB84205.1||gnl|jgi|Alide2_1820 note TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P-type, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter~KEGG: tin:Tint_3215 heavy metal translocating P-type ATPase~PFAM: ATPase, P-type, ATPase-associated domain; Haloacid dehalogenase-like hydrolase inference protein motif:TFAM:TIGR01525 db_xref GO:0005524 db_xref GO:0046872 db_xref GO:0046873 db_xref InterPro:IPR001757 db_xref InterPro:IPR005834 db_xref InterPro:IPR006404 db_xref InterPro:IPR006416 db_xref InterPro:IPR008250 1923466 1923909 gene locus_tag Alide2_1821 1923466 1923909 CDS product transcriptional regulator, MerR family transl_table 11 protein_id gb|AEB84206.1||gnl|jgi|Alide2_1821 note TIGRFAM: Cd(II)/Pb(II)-responsive transcriptional regulator~PFAM: Transcription regulator MerR, DNA binding; HTH transcriptional regulator, MerR~KEGG: tgr:Tgr7_2809 putative transcriptional regulator, MerR family~SMART: HTH transcriptional regulator, MerR inference protein motif:TFAM:TIGR02047 db_xref InterPro:IPR000551 db_xref InterPro:IPR011791 db_xref InterPro:IPR015358 1925798 1923945 gene locus_tag Alide2_1822 1925798 1923945 CDS product integrase family protein transl_table 11 protein_id gb|AEB84207.1||gnl|jgi|Alide2_1822 note PFAM: Integrase, catalytic core, phage~KEGG: mpt:Mpe_A2408 integrase (int) inference protein motif:PFAM:PF00589 db_xref GO:0003677 db_xref InterPro:IPR002104 1926278 1926889 gene locus_tag Alide2_1823 1926278 1926889 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84208.1||gnl|jgi|Alide2_1823 note KEGG: pna:Pnap_4574 hypothetical protein inference similar to AA sequence:KEGG:Pnap_4574 1926985 1928460 gene locus_tag Alide2_1824 1926985 1928460 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84209.1||gnl|jgi|Alide2_1824 note KEGG: xfa:XF2733 hypothetical protein inference similar to AA sequence:KEGG:XF2733 1928492 1929166 gene locus_tag Alide2_1825 1928492 1929166 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84210.1||gnl|jgi|Alide2_1825 note KEGG: tmz:Tmz1t_0049 hypothetical protein inference similar to AA sequence:KEGG:Tmz1t_0049 1929163 1932540 gene locus_tag Alide2_1826 1929163 1932540 CDS product conserved hypothetical cytosolic protein transl_table 11 protein_id gb|AEB84211.1||gnl|jgi|Alide2_1826 note KEGG: tmz:Tmz1t_0051 conserved hypothetical cytosolic protein inference similar to AA sequence:KEGG:Tmz1t_0051 1932537 1933742 gene locus_tag Alide2_1827 1932537 1933742 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84212.1||gnl|jgi|Alide2_1827 note KEGG: xfm:Xfasm12_2281 hypothetical protein inference similar to AA sequence:KEGG:Xfasm12_2281 1934132 1933764 gene locus_tag Alide2_1828 pseudo 1935326 1934967 gene locus_tag Alide2_1829 pseudo 1935553 1935846 gene locus_tag Alide2_1830 1935553 1935846 CDS product transposase IS3/IS911 family protein transl_table 11 protein_id gb|AEB84213.1||gnl|jgi|Alide2_1830 note PFAM: Transposase IS3/IS911family~KEGG: rpi:Rpic_2066 transposase IS3/IS911 family protein inference protein motif:PFAM:PF01527 db_xref GO:0003677 db_xref GO:0004803 db_xref InterPro:IPR002514 1935843 1936472 gene locus_tag Alide2_1831 1935843 1936472 CDS product Integrase catalytic region transl_table 11 protein_id gb|AEB84214.1||gnl|jgi|Alide2_1831 note PFAM: Integrase, catalytic core~KEGG: rde:RD1_3452 transposase, putative inference protein motif:PFAM:PF00665 db_xref GO:0003677 db_xref InterPro:IPR001584 1937780 1937148 gene locus_tag Alide2_1832 1937780 1937148 CDS product transcriptional regulator, TetR family transl_table 11 protein_id gb|AEB84215.1||gnl|jgi|Alide2_1832 note PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal~KEGG: pol:Bpro_5293 TetR family transcriptional regulator inference protein motif:PFAM:PF00440 db_xref GO:0003700 db_xref InterPro:IPR001647 1938014 1939180 gene locus_tag Alide2_1833 1938014 1939180 CDS product Butyryl-CoA dehydrogenase EC_number 1.3.8.1 transl_table 11 protein_id gb|AEB84216.1||gnl|jgi|Alide2_1833 note KEGG: axy:AXYL_02788 acyl-CoA dehydrogenase 1~PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain inference protein motif:PRIAM:1.3.99.2 db_xref InterPro:IPR006090 db_xref InterPro:IPR006091 db_xref InterPro:IPR006092 1939221 1940537 gene locus_tag Alide2_1834 1939221 1940537 CDS product Formyl-CoA transferase EC_number 2.8.3.16 transl_table 11 protein_id gb|AEB84217.1||gnl|jgi|Alide2_1834 note KEGG: reu:Reut_A3087 L-carnitine dehydratase/bile acid-inducible protein F~PFAM: CoA-transferase family III inference protein motif:PRIAM:2.8.3.16 db_xref InterPro:IPR003673 1940534 1941676 gene locus_tag Alide2_1835 1940534 1941676 CDS product acyl-CoA dehydrogenase domain-containing protein transl_table 11 protein_id gb|AEB84218.1||gnl|jgi|Alide2_1835 note PFAM: Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, type 1~KEGG: pol:Bpro_5276 acyl-CoA dehydrogenase-like inference protein motif:PFAM:PF02771 db_xref GO:0003995 db_xref InterPro:IPR006090 db_xref InterPro:IPR006092 1941690 1942847 gene locus_tag Alide2_1836 1941690 1942847 CDS product Butyryl-CoA dehydrogenase EC_number 1.3.8.1 transl_table 11 protein_id gb|AEB84219.1||gnl|jgi|Alide2_1836 note KEGG: pol:Bpro_5277 acyl-CoA dehydrogenase-like~PFAM: Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, type 1 inference protein motif:PRIAM:1.3.99.2 db_xref InterPro:IPR006090 db_xref InterPro:IPR006091 db_xref InterPro:IPR006092 1943359 1942967 gene locus_tag Alide2_1837 1943359 1942967 CDS product protein of unknown function DUF35 transl_table 11 protein_id gb|AEB84220.1||gnl|jgi|Alide2_1837 note PFAM: Domain of unknown function DUF35, OB-fold, C-terminal~KEGG: eba:ebB200 putative thiolase subunit inference protein motif:PFAM:PF01796 db_xref InterPro:IPR002878 1944530 1943364 gene locus_tag Alide2_1838 1944530 1943364 CDS product acetyl-CoA acetyltransferase transl_table 11 protein_id gb|AEB84221.1||gnl|jgi|Alide2_1838 note KEGG: reh:H16_A1297 acetyl-CoA acetyltransferase inference similar to AA sequence:KEGG:H16_A1297 1945567 1944635 gene locus_tag Alide2_1839 1945567 1944635 CDS product transcriptional regulator, IclR family transl_table 11 protein_id gb|AEB84222.1||gnl|jgi|Alide2_1839 note KEGG: pol:Bpro_5250 IclR family transcriptional regulator~PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal~SMART: Transcription regulator IclR, N-terminal inference protein motif:PFAM:PF01614 db_xref GO:0003677 db_xref InterPro:IPR005471 db_xref InterPro:IPR014757 1945716 1946474 gene locus_tag Alide2_1840 1945716 1946474 CDS product 3-oxoacyl-(acyl-carrier-protein) reductase EC_number 1.1.1.100 transl_table 11 protein_id gb|AEB84223.1||gnl|jgi|Alide2_1840 note PFAM: Short-chain dehydrogenase/reductase SDR~KEGG: eba:ebA5300 putative dehydrogenase~SMART: Polyketide synthase/Fatty acid synthase, KR inference protein motif:PRIAM:1.1.1.100 db_xref InterPro:IPR002198 db_xref InterPro:IPR020842 1946575 1948692 gene locus_tag Alide2_1841 1946575 1948692 CDS product CoA-binding domain protein transl_table 11 protein_id gb|AEB84224.1||gnl|jgi|Alide2_1841 note KEGG: bpt:Bpet1210 acetyl-CoA synthetase~PFAM: CoA-binding~SMART: CoA-binding inference protein motif:PFAM:PF02629 db_xref InterPro:IPR003781 1948715 1949684 gene locus_tag Alide2_1842 pseudo 1949903 1950721 gene locus_tag Alide2_1843 1949903 1950721 CDS product Enoyl-CoA hydratase/isomerase transl_table 11 protein_id gb|AEB84225.1||gnl|jgi|Alide2_1843 note PFAM: Crotonase, core~KEGG: dac:Daci_0194 enoyl-CoA hydratase/isomerase inference protein motif:PFAM:PF00378 db_xref GO:0003824 db_xref InterPro:IPR001753 1950735 1953017 gene locus_tag Alide2_1844 1950735 1953017 CDS product Isovaleryl-CoA dehydrogenase, Butyryl-CoA dehydrogenase EC_number 1.3.8.1 EC_number 1.3.99.10 transl_table 11 protein_id gb|AEB84226.1||gnl|jgi|Alide2_1844 note KEGG: vap:Vapar_1314 acyl-CoA dehydrogenase domain protein~PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain inference protein motif:PRIAM:1.3.99.10, 1.3.99.2 db_xref InterPro:IPR006090 db_xref InterPro:IPR006091 db_xref InterPro:IPR006092 1954038 1953082 gene locus_tag Alide2_1845 1954038 1953082 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84227.1||gnl|jgi|Alide2_1845 note KEGG: reu:Reut_B4356 hypothetical protein inference similar to AA sequence:KEGG:Reut_B4356 db_xref InterPro:IPR005064 1954999 1954041 gene locus_tag Alide2_1846 pseudo 1955982 1955011 gene locus_tag Alide2_1847 1955982 1955011 CDS product extra-cytoplasmic solute receptor transl_table 11 protein_id gb|AEB84228.1||gnl|jgi|Alide2_1847 note KEGG: rme:Rmet_3671 extra-cytoplasmic solute receptor inference similar to AA sequence:KEGG:Rmet_3671 db_xref InterPro:IPR005064 1957001 1956027 gene locus_tag Alide2_1848 1957001 1956027 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84229.1||gnl|jgi|Alide2_1848 note KEGG: cti:RALTA_B1677 conserved hypothetical protein; UPF0065 inference similar to AA sequence:KEGG:RALTA_B1677 db_xref InterPro:IPR005064 1958056 1957199 gene locus_tag Alide2_1849 1958056 1957199 CDS product 3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoAhydratase EC_number 4.2.1.107 transl_table 11 protein_id gb|AEB84230.1||gnl|jgi|Alide2_1849 note KEGG: pol:Bpro_5282 MaoC-like dehydratase~PFAM: MaoC-like dehydratase inference protein motif:PRIAM:4.2.1.107 db_xref InterPro:IPR002539 1958363 1958046 gene locus_tag Alide2_1850 1958363 1958046 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84231.1||gnl|jgi|Alide2_1850 inference ab initio prediction:Prodigal:1.4 1959302 1958445 gene locus_tag Alide2_1851 1959302 1958445 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84232.1||gnl|jgi|Alide2_1851 note KEGG: bbr:BB4339 hypothetical protein inference similar to AA sequence:KEGG:BB4339 1959939 1959514 gene locus_tag Alide2_1852 1959939 1959514 CDS product regulatory protein IclR transl_table 11 protein_id gb|AEB84233.1||gnl|jgi|Alide2_1852 note KEGG: pol:Bpro_5250 IclR family transcriptional regulator~PFAM: Transcription regulator IclR, N-terminal~SMART: Transcription regulator IclR, N-terminal inference protein motif:PFAM:PF09339 db_xref GO:0003677 db_xref InterPro:IPR005471 1960337 1961089 gene locus_tag Alide2_1853 1960337 1961089 CDS product Electron transfer flavoprotein alpha/beta-subunit transl_table 11 protein_id gb|AEB84234.1||gnl|jgi|Alide2_1853 note KEGG: azo:azo2492 electron transfer flavoprotein subunit beta~PFAM: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal~SMART: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal inference protein motif:PFAM:PF01012 db_xref InterPro:IPR014730 1961086 1962027 gene locus_tag Alide2_1854 1961086 1962027 CDS product Electron transfer flavoprotein alpha subunit transl_table 11 protein_id gb|AEB84235.1||gnl|jgi|Alide2_1854 note KEGG: tmz:Tmz1t_0422 electron transfer flavoprotein alpha subunit~PFAM: Electron transfer flavoprotein, alpha subunit, C-terminal; Electron transfer flavoprotein, alpha/beta-subunit, N-terminal~SMART: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal inference protein motif:PFAM:PF00766 db_xref InterPro:IPR014730 db_xref InterPro:IPR014731 1962062 1962832 gene locus_tag Alide2_1855 1962062 1962832 CDS product Enoyl-CoA hydratase/isomerase transl_table 11 protein_id gb|AEB84236.1||gnl|jgi|Alide2_1855 note PFAM: Crotonase, core~KEGG: bxe:Bxe_C0269 enoyl-CoA hydratase inference protein motif:PFAM:PF00378 db_xref GO:0003824 db_xref InterPro:IPR001753 1962952 1963911 gene locus_tag Alide2_1856 1962952 1963911 CDS product 2-nitropropane dioxygenase NPD transl_table 11 protein_id gb|AEB84237.1||gnl|jgi|Alide2_1856 note PFAM: 2-nitropropane dioxygenase, NPD~KEGG: bph:Bphy_0157 2-nitropropane dioxygenase NPD inference protein motif:PFAM:PF03060 db_xref GO:0018580 db_xref InterPro:IPR004136 1964047 1965024 gene locus_tag Alide2_1857 1964047 1965024 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84238.1||gnl|jgi|Alide2_1857 note KEGG: vap:Vapar_0801 hypothetical protein inference similar to AA sequence:KEGG:Vapar_0801 db_xref InterPro:IPR005064 1966050 1965148 gene locus_tag Alide2_1858 1966050 1965148 CDS product alpha/beta hydrolase fold protein transl_table 11 protein_id gb|AEB84239.1||gnl|jgi|Alide2_1858 note PFAM: Alpha/beta hydrolase fold-1~KEGG: pla:Plav_2055 alpha/beta hydrolase fold inference protein motif:PFAM:PF00561 db_xref InterPro:IPR000073 1967245 1966073 gene locus_tag Alide2_1859 1967245 1966073 CDS product Alpha-methylacyl-CoA racemase EC_number 5.1.99.4 transl_table 11 protein_id gb|AEB84240.1||gnl|jgi|Alide2_1859 note manually curated~KEGG: mau:Micau_2811 L-carnitine dehydratase/bile acid-inducible protein F~PFAM: CoA-transferase family III inference protein motif:PRIAM:5.1.99.4 db_xref InterPro:IPR003673 1968531 1967236 gene locus_tag Alide2_1860 1968531 1967236 CDS product 4-hydroxybutyrate-CoA transferase/hydrolase transl_table 11 protein_id gb|AEB84241.1||gnl|jgi|Alide2_1860 note KEGG: rpa:RPA4552 4-hydroxybutyrate-CoA transferase/hydrolase inference similar to AA sequence:KEGG:RPA4552 1970008 1968554 gene locus_tag Alide2_1861 1970008 1968554 CDS product MmgE/PrpD family protein transl_table 11 protein_id gb|AEB84242.1||gnl|jgi|Alide2_1861 note PFAM: MmgE/PrpD~KEGG: bur:Bcep18194_C7308 MmgE/PrpD inference protein motif:PFAM:PF03972 db_xref GO:0047547 db_xref InterPro:IPR005656 1971018 1970044 gene locus_tag Alide2_1862 1971018 1970044 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84243.1||gnl|jgi|Alide2_1862 note KEGG: bbr:BB3950 hypothetical protein inference similar to AA sequence:KEGG:BB3950 db_xref InterPro:IPR005064 1972354 1971089 gene locus_tag Alide2_1863 1972354 1971089 CDS product Formyl-CoA transferase EC_number 2.8.3.16 transl_table 11 protein_id gb|AEB84244.1||gnl|jgi|Alide2_1863 note KEGG: bbr:BB4584 hypothetical protein~PFAM: CoA-transferase family III inference protein motif:PRIAM:2.8.3.16 db_xref InterPro:IPR003673 1973490 1972351 gene locus_tag Alide2_1864 1973490 1972351 CDS product Butyryl-CoA dehydrogenase EC_number 1.3.8.1 transl_table 11 protein_id gb|AEB84245.1||gnl|jgi|Alide2_1864 note KEGG: bur:Bcep18194_C7492 acyl-CoA dehydrogenase-like~PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain inference protein motif:PRIAM:1.3.99.2 db_xref InterPro:IPR006090 db_xref InterPro:IPR006091 db_xref InterPro:IPR006092 1973964 1973518 gene locus_tag Alide2_1865 1973964 1973518 CDS product MaoC domain protein dehydratase transl_table 11 protein_id gb|AEB84246.1||gnl|jgi|Alide2_1865 note PFAM: MaoC-like dehydratase~KEGG: bur:Bcep18194_C7491 MaoC-like dehydratase inference protein motif:PFAM:PF01575 db_xref GO:0016491 db_xref InterPro:IPR002539 1974158 1974652 gene locus_tag Alide2_1866 1974158 1974652 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84247.1||gnl|jgi|Alide2_1866 note KEGG: bpt:Bpet1156 hypothetical protein inference similar to AA sequence:KEGG:Bpet1156 1974694 1975665 gene locus_tag Alide2_1867 1974694 1975665 CDS product putative secreted protein transl_table 11 protein_id gb|AEB84248.1||gnl|jgi|Alide2_1867 note KEGG: bpt:Bpet1157 putative secreted protein inference similar to AA sequence:KEGG:Bpet1157 db_xref InterPro:IPR005064 1975662 1976480 gene locus_tag Alide2_1868 1975662 1976480 CDS product Enoyl-CoA hydratase/isomerase transl_table 11 protein_id gb|AEB84249.1||gnl|jgi|Alide2_1868 note PFAM: Crotonase, core~KEGG: bpt:Bpet1158 putative enoyl-CoA hydratase/isomerase inference protein motif:PFAM:PF00378 db_xref GO:0003824 db_xref InterPro:IPR001753 1976477 1977313 gene locus_tag Alide2_1869 1976477 1977313 CDS product Enoyl-CoA hydratase/isomerase transl_table 11 protein_id gb|AEB84250.1||gnl|jgi|Alide2_1869 note PFAM: Crotonase, core~KEGG: axy:AXYL_06657 enoyl-CoA hydratase/isomerase family protein 35 inference protein motif:PFAM:PF00378 db_xref GO:0003824 db_xref InterPro:IPR001753 1978122 1977310 gene locus_tag Alide2_1870 1978122 1977310 CDS product transcriptional regulator, IclR family transl_table 11 protein_id gb|AEB84251.1||gnl|jgi|Alide2_1870 note KEGG: axy:AXYL_06658 transcriptional regulator family protein 40~PFAM: Transcription regulator IclR, N-terminal; Transcription regulator IclR, C-terminal~SMART: Transcription regulator IclR, N-terminal inference protein motif:PFAM:PF09339 db_xref GO:0003677 db_xref InterPro:IPR005471 db_xref InterPro:IPR014757 1978943 1978122 gene locus_tag Alide2_1871 1978943 1978122 CDS product transcriptional regulator, IclR family transl_table 11 protein_id gb|AEB84252.1||gnl|jgi|Alide2_1871 note KEGG: axy:AXYL_06659 transcriptional regulator family protein 41~PFAM: Transcription regulator IclR, N-terminal; Transcription regulator IclR, C-terminal~SMART: Transcription regulator IclR, N-terminal inference protein motif:PFAM:PF09339 db_xref GO:0003677 db_xref InterPro:IPR005471 db_xref InterPro:IPR014757 1980938 1978995 gene locus_tag Alide2_1872 1980938 1978995 CDS product Methylcrotonoyl-CoA carboxylase, Pyruvate carboxylase EC_number 6.4.1.1 EC_number 6.4.1.4 transl_table 11 protein_id gb|AEB84253.1||gnl|jgi|Alide2_1872 note PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Carbamoyl-phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; Biotin/lipoyl attachment~KEGG: bpt:Bpet1154 putative biotin carboxylase subunit of propionyl-CoA carboxylase~SMART: Biotin carboxylase, C-terminal inference protein motif:PRIAM:6.4.1.4, 6.4.1.1 db_xref InterPro:IPR000089 db_xref InterPro:IPR005479 db_xref InterPro:IPR005481 db_xref InterPro:IPR005482 1982545 1980941 gene locus_tag Alide2_1873 1982545 1980941 CDS product Methylcrotonoyl-CoA carboxylase EC_number 6.4.1.4 transl_table 11 protein_id gb|AEB84254.1||gnl|jgi|Alide2_1873 note KEGG: bpt:Bpet1153 putative propionyl-CoA carboxylase beta subunit~PFAM: Carboxyl transferase inference protein motif:PRIAM:6.4.1.4 db_xref InterPro:IPR000022 1982859 1982548 gene locus_tag Alide2_1874 1982859 1982548 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84255.1||gnl|jgi|Alide2_1874 note KEGG: bpt:Bpet1152 hypothetical protein inference similar to AA sequence:KEGG:Bpet1152 1984246 1982870 gene locus_tag Alide2_1875 1984246 1982870 CDS product protein of unknown function DUF1446 transl_table 11 protein_id gb|AEB84256.1||gnl|jgi|Alide2_1875 note PFAM: Protein of unknown function DUF1446~KEGG: bpt:Bpet1151 hypothetical protein inference protein motif:PFAM:PF07287 db_xref InterPro:IPR010839 1984420 1984806 gene locus_tag Alide2_1876 1984420 1984806 CDS product phenylacetic acid degradation-related protein transl_table 11 protein_id gb|AEB84257.1||gnl|jgi|Alide2_1876 note KEGG: reh:H16_B1907 hypothetical protein~TIGRFAM: Phenylacetic acid degradation-related protein~PFAM: Thioesterase superfamily inference protein motif:TFAM:TIGR00369 db_xref InterPro:IPR003736 db_xref InterPro:IPR006683 1985573 1984836 gene locus_tag Alide2_1877 pseudo 1985576 1986172 gene locus_tag Alide2_1878 pseudo 1987026 1986223 gene locus_tag Alide2_1879 1987026 1986223 CDS product IstB domain protein ATP-binding protein transl_table 11 protein_id gb|AEB84258.1||gnl|jgi|Alide2_1879 note KEGG: axy:AXYL_06594 IstB-like ATP binding family protein 3~PFAM: IstB-like ATP-binding protein~SMART: ATPase, AAA+ type, core inference protein motif:PFAM:PF01695 db_xref GO:0005524 db_xref InterPro:IPR002611 db_xref InterPro:IPR003593 1988542 1987016 gene locus_tag Alide2_1880 1988542 1987016 CDS product Integrase catalytic region transl_table 11 protein_id gb|AEB84259.1||gnl|jgi|Alide2_1880 note PFAM: Integrase, catalytic core~KEGG: axy:AXYL_06593 integrase family protein 10 inference protein motif:PFAM:PF00665 db_xref GO:0003677 db_xref InterPro:IPR001584 1988654 1988755 gene locus_tag Alide2_1881 pseudo 1988887 1989426 gene locus_tag Alide2_1882 1988887 1989426 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84260.1||gnl|jgi|Alide2_1882 note KEGG: tmz:Tmz1t_0992 hypothetical protein inference similar to AA sequence:KEGG:Tmz1t_0992 1989423 1989806 gene locus_tag Alide2_1883 1989423 1989806 CDS product single-strand binding protein/Primosomal replication protein n transl_table 11 protein_id gb|AEB84261.1||gnl|jgi|Alide2_1883 note PFAM: Primosome PriB/single-strand DNA-binding~KEGG: tmz:Tmz1t_0991 single-stranded DNA-binding protein inference protein motif:PFAM:PF00436 db_xref GO:0003697 db_xref InterPro:IPR000424 1990101 1992131 gene locus_tag Alide2_1884 1990101 1992131 CDS product DNA topoisomerase III EC_number 5.99.1.2 transl_table 11 protein_id gb|AEB84262.1||gnl|jgi|Alide2_1884 note SMART: DNA topoisomerase, type IA, DNA-binding; DNA topoisomerase, type IA, domain 2; Toprim domain~TIGRFAM: DNA topoisomerase III, bacterial-type~KEGG: mpt:Mpe_A2342 DNA topoisomerase III~PFAM: DNA topoisomerase, type IA, central; Toprim domain; DNA topoisomerase, type IA, zn finger inference protein motif:TFAM:TIGR01056 db_xref GO:0003677 db_xref GO:0003916 db_xref InterPro:IPR003601 db_xref InterPro:IPR003602 db_xref InterPro:IPR005738 db_xref InterPro:IPR006171 db_xref InterPro:IPR013497 db_xref InterPro:IPR013498 1993487 1992657 gene locus_tag Alide2_1885 1993487 1992657 CDS product arsenate reductase transl_table 11 protein_id gb|AEB84263.1||gnl|jgi|Alide2_1885 note KEGG: mpt:Mpe_A2343 arsenate reductase~TIGRFAM: Arsenate reductase~PFAM: Arsenate reductase-like; GCN5-related N-acetyltransferase (GNAT) domain inference protein motif:TFAM:TIGR00014 db_xref GO:0008794 db_xref InterPro:IPR000182 db_xref InterPro:IPR006659 db_xref InterPro:IPR006660 1994575 1993484 gene locus_tag Alide2_1886 1994575 1993484 CDS product arsenical-resistance protein transl_table 11 protein_id gb|AEB84264.1||gnl|jgi|Alide2_1886 note KEGG: mpt:Mpe_A2344 ACR3 permease~TIGRFAM: Arsenical-resistance protein ACR3~PFAM: Bile acid:sodium symporter inference protein motif:TFAM:TIGR00832 db_xref InterPro:IPR002657 db_xref InterPro:IPR004706 1995082 1994585 gene locus_tag Alide2_1887 1995082 1994585 CDS product protein tyrosine phosphatase transl_table 11 protein_id gb|AEB84265.1||gnl|jgi|Alide2_1887 note KEGG: mpt:Mpe_A2345 arsenate reductase, putative~PFAM: Protein-tyrosine phosphatase, low molecular weight~SMART: Protein-tyrosine phosphatase, low molecular weight inference protein motif:PFAM:PF01451 db_xref GO:0004725 db_xref InterPro:IPR017867 1995559 1995095 gene locus_tag Alide2_1888 1995559 1995095 CDS product Glyoxalase/bleomycin resistance protein/dioxygenase transl_table 11 protein_id gb|AEB84266.1||gnl|jgi|Alide2_1888 note PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase~KEGG: mpt:Mpe_A2346 hypothetical protein inference protein motif:PFAM:PF00903 db_xref InterPro:IPR004360 1995901 1995572 gene locus_tag Alide2_1889 1995901 1995572 CDS product regulatory protein ArsR transl_table 11 protein_id gb|AEB84267.1||gnl|jgi|Alide2_1889 note SMART: HTH transcriptional regulator, ArsR~KEGG: mpt:Mpe_A2347 ArsR family transcriptional regulator inference protein motif:SMART:SM00418 db_xref GO:0003700 db_xref InterPro:IPR001845 1996153 1996479 gene locus_tag Alide2_1890 1996153 1996479 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84268.1||gnl|jgi|Alide2_1890 note KEGG: rpf:Rpic12D_0655 hypothetical protein inference similar to AA sequence:KEGG:Rpic12D_0655 1996505 1996897 gene locus_tag Alide2_1891 1996505 1996897 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84269.1||gnl|jgi|Alide2_1891 note KEGG: rpf:Rpic12D_0656 hypothetical protein inference similar to AA sequence:KEGG:Rpic12D_0656 1996999 1997463 gene locus_tag Alide2_1892 1996999 1997463 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84270.1||gnl|jgi|Alide2_1892 note KEGG: tau:Tola_2412 hypothetical protein inference similar to AA sequence:KEGG:Tola_2412 1997544 1998260 gene locus_tag Alide2_1893 1997544 1998260 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84271.1||gnl|jgi|Alide2_1893 note KEGG: rpf:Rpic12D_0658 hypothetical protein inference similar to AA sequence:KEGG:Rpic12D_0658 1998554 1999351 gene locus_tag Alide2_1894 1998554 1999351 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84272.1||gnl|jgi|Alide2_1894 note KEGG: rpf:Rpic12D_0659 hypothetical protein inference similar to AA sequence:KEGG:Rpic12D_0659 1999426 1999791 gene locus_tag Alide2_1895 1999426 1999791 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84273.1||gnl|jgi|Alide2_1895 note KEGG: ajs:Ajs_2227 hypothetical protein inference similar to AA sequence:KEGG:Ajs_2227 1999934 2000776 gene locus_tag Alide2_1896 1999934 2000776 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84274.1||gnl|jgi|Alide2_1896 note KEGG: rpf:Rpic12D_0661 hypothetical protein inference similar to AA sequence:KEGG:Rpic12D_0661 2001095 2001649 gene locus_tag Alide2_1897 2001095 2001649 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84275.1||gnl|jgi|Alide2_1897 note KEGG: rpf:Rpic12D_0662 hypothetical protein inference similar to AA sequence:KEGG:Rpic12D_0662 2001770 2002399 gene locus_tag Alide2_1898 2001770 2002399 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84276.1||gnl|jgi|Alide2_1898 note KEGG: rpf:Rpic12D_0663 hypothetical protein inference similar to AA sequence:KEGG:Rpic12D_0663 2002501 2002893 gene locus_tag Alide2_1899 2002501 2002893 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84277.1||gnl|jgi|Alide2_1899 note KEGG: mpt:Mpe_A2364 hypothetical protein inference similar to AA sequence:KEGG:Mpe_A2364 2002901 2003170 gene locus_tag Alide2_1900 2002901 2003170 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84278.1||gnl|jgi|Alide2_1900 note KEGG: tgr:Tgr7_2834 hypothetical protein inference similar to AA sequence:KEGG:Tgr7_2834 2003308 2004135 gene locus_tag Alide2_1901 2003308 2004135 CDS product protein of unknown function DUF932 transl_table 11 protein_id gb|AEB84279.1||gnl|jgi|Alide2_1901 note PFAM: Protein of unknown function DUF932~KEGG: rpf:Rpic12D_0664 protein of unknown function DUF932 inference protein motif:PFAM:PF06067 db_xref InterPro:IPR009276 2004636 2005292 gene locus_tag Alide2_1902 2004636 2005292 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84280.1||gnl|jgi|Alide2_1902 note KEGG: rpf:Rpic12D_0665 hypothetical protein inference similar to AA sequence:KEGG:Rpic12D_0665 2005360 2006475 gene locus_tag Alide2_1903 2005360 2006475 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84281.1||gnl|jgi|Alide2_1903 note KEGG: rpf:Rpic12D_0666 hypothetical protein inference similar to AA sequence:KEGG:Rpic12D_0666 2006587 2006892 gene locus_tag Alide2_1904 2006587 2006892 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84282.1||gnl|jgi|Alide2_1904 note KEGG: tmz:Tmz1t_0973 hypothetical protein inference similar to AA sequence:KEGG:Tmz1t_0973 2006995 2009277 gene locus_tag Alide2_1905 2006995 2009277 CDS product DEAD-like helicase transl_table 11 protein_id gb|AEB84283.1||gnl|jgi|Alide2_1905 note SMART: DEAD-like helicase, N-terminal~KEGG: rpf:Rpic12D_0667 DEAD-like helicase inference protein motif:SMART:SM00487 db_xref InterPro:IPR014001 2009437 2010048 gene locus_tag Alide2_1906 2009437 2010048 CDS product Integrating conjugative element protein PilL, PFGI-1 transl_table 11 protein_id gb|AEB84284.1||gnl|jgi|Alide2_1906 note TIGRFAM: Integrating conjugative element protein PilL, PFGI-1~KEGG: rpf:Rpic12D_0668 hypothetical protein inference protein motif:TFAM:TIGR03748 db_xref InterPro:IPR022260 2010045 2010689 gene locus_tag Alide2_1907 2010045 2010689 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84285.1||gnl|jgi|Alide2_1907 note KEGG: rpf:Rpic12D_0669 hypothetical protein inference similar to AA sequence:KEGG:Rpic12D_0669 2010699 2011430 gene locus_tag Alide2_1908 2010699 2011430 CDS product integrating conjugative element protein, PFL_4693 family transl_table 11 protein_id gb|AEB84286.1||gnl|jgi|Alide2_1908 note TIGRFAM: Integrating conjugative element protein, PFL4693~KEGG: rpf:Rpic12D_0670 putative secreted protein inference protein motif:TFAM:TIGR03759 db_xref InterPro:IPR022293 2011415 2012014 gene locus_tag Alide2_1909 2011415 2012014 CDS product Lytic transglycosylase catalytic transl_table 11 protein_id gb|AEB84287.1||gnl|jgi|Alide2_1909 note PFAM: Lytic transglycosylase-like, catalytic~KEGG: rpf:Rpic12D_0671 lytic transglycosylase catalytic inference protein motif:PFAM:PF01464 db_xref InterPro:IPR008258 2012011 2012577 gene locus_tag Alide2_1910 2012011 2012577 CDS product integrating conjugative element protein, PFL_4695 family transl_table 11 protein_id gb|AEB84288.1||gnl|jgi|Alide2_1910 note TIGRFAM: Integrating conjugative element protein, PFL4695~KEGG: rpf:Rpic12D_0672 hypothetical protein inference protein motif:TFAM:TIGR03765 db_xref InterPro:IPR021300 2012598 2014757 gene locus_tag Alide2_1911 2012598 2014757 CDS product conjugative coupling factor TraD, SXT/TOL subfamily transl_table 11 protein_id gb|AEB84289.1||gnl|jgi|Alide2_1911 note TIGRFAM: Conjugative coupling factor TraG/TraD; Conjugative coupling factor TraG/TraD, PFGI-1~KEGG: rpf:Rpic12D_0673 hypothetical protein inference protein motif:TFAM:TIGR03743 db_xref InterPro:IPR022458 db_xref InterPro:IPR022503 2014754 2015503 gene locus_tag Alide2_1912 2014754 2015503 CDS product integrating conjugative element membrane protein, PFL_4697 family transl_table 11 protein_id gb|AEB84290.1||gnl|jgi|Alide2_1912 note TIGRFAM: Integrating conjugative element protein, PFL4697, membrane~KEGG: rpf:Rpic12D_0674 hypothetical protein inference protein motif:TFAM:TIGR03747 db_xref InterPro:IPR022266 2015617 2016024 gene locus_tag Alide2_1913 2015617 2016024 CDS product Protein of unknown function, RAQPRD transl_table 11 protein_id gb|AEB84291.1||gnl|jgi|Alide2_1913 note KEGG: rpf:Rpic12D_0675 hypothetical protein~TIGRFAM: Uncharacterised protein family, RAQPRD~PFAM: Uncharacterised protein family, RAQPRD inference protein motif:TFAM:TIGR01690 db_xref InterPro:IPR019110 2016021 2016260 gene locus_tag Alide2_1914 2016021 2016260 CDS product integrating conjugative element protein, PFL_4701 family transl_table 11 protein_id gb|AEB84292.1||gnl|jgi|Alide2_1914 note TIGRFAM: Protein of unknown function DUF3262~KEGG: rpf:Rpic12D_0676 hypothetical protein inference protein motif:TFAM:TIGR03758 db_xref InterPro:IPR021676 2016282 2016659 gene locus_tag Alide2_1915 2016282 2016659 CDS product integrating conjugative element membrane protein, PFL_4702 family transl_table 11 protein_id gb|AEB84293.1||gnl|jgi|Alide2_1915 note TIGRFAM: Integrating conjugative element protein PFL4702~KEGG: rpf:Rpic12D_0677 hypothetical protein inference protein motif:TFAM:TIGR03745 db_xref InterPro:IPR021356 2016672 2017100 gene locus_tag Alide2_1916 2016672 2017100 CDS product conjugative transfer region protein, TIGR03750 family transl_table 11 protein_id gb|AEB84294.1||gnl|jgi|Alide2_1916 note TIGRFAM: Protein of unknown function DUF3487~KEGG: rpf:Rpic12D_0678 hypothetical protein inference protein motif:TFAM:TIGR03750 db_xref InterPro:IPR021877 2017097 2017789 gene locus_tag Alide2_1917 2017097 2017789 CDS product integrating conjugative element protein, PFL_4703 family transl_table 11 protein_id gb|AEB84295.1||gnl|jgi|Alide2_1917 note TIGRFAM: Protein of unknown function DUF2895~KEGG: rpf:Rpic12D_0679 hypothetical protein inference protein motif:TFAM:TIGR03746 db_xref InterPro:IPR021548 2017786 2018715 gene locus_tag Alide2_1918 2017786 2018715 CDS product integrating conjugative element protein, PFL_4704 family transl_table 11 protein_id gb|AEB84296.1||gnl|jgi|Alide2_1918 note TIGRFAM: Integrating conjugative element protein, PFL4704~KEGG: rpf:Rpic12D_0680 hypothetical protein inference protein motif:TFAM:TIGR03749 db_xref InterPro:IPR021844 2018705 2020174 gene locus_tag Alide2_1919 2018705 2020174 CDS product integrating conjugative element protein, PFL_4705 family transl_table 11 protein_id gb|AEB84297.1||gnl|jgi|Alide2_1919 note TIGRFAM: Integrating conjugative element protein, PFL4705~KEGG: rpf:Rpic12D_0681 hypothetical protein inference protein motif:TFAM:TIGR03752 db_xref InterPro:IPR021207 2020155 2020589 gene locus_tag Alide2_1920 2020155 2020589 CDS product conjugative transfer region lipoprotein, TIGR03751 family transl_table 11 protein_id gb|AEB84298.1||gnl|jgi|Alide2_1920 note TIGRFAM: Conjugative transfer region lipoprotein~KEGG: rpf:Rpic12D_0682 hypothetical protein inference protein motif:TFAM:TIGR03751 db_xref InterPro:IPR022262 2020589 2023471 gene locus_tag Alide2_1921 2020589 2023471 CDS product conjugative transfer ATPase, PFL_4706 family transl_table 11 protein_id gb|AEB84299.1||gnl|jgi|Alide2_1921 note TIGRFAM: Conjugative transfer ATPase, PFL4706~KEGG: rpf:Rpic12D_0683 hypothetical protein inference protein motif:TFAM:TIGR03744 db_xref InterPro:IPR022303 2023482 2024237 gene locus_tag Alide2_1922 2023482 2024237 CDS product DSBA oxidoreductase transl_table 11 protein_id gb|AEB84300.1||gnl|jgi|Alide2_1922 note PFAM: DSBA-like thioredoxin domain~KEGG: rpf:Rpic12D_0684 DsbA oxidoreductase inference protein motif:PFAM:PF01323 db_xref GO:0015035 db_xref InterPro:IPR001853 2024431 2025018 gene locus_tag Alide2_1923 2024431 2025018 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84301.1||gnl|jgi|Alide2_1923 note KEGG: net:Neut_0078 hypothetical protein inference similar to AA sequence:KEGG:Neut_0078 2025193 2025801 gene locus_tag Alide2_1924 2025193 2025801 CDS product regulatory protein TetR transl_table 11 protein_id gb|AEB84302.1||gnl|jgi|Alide2_1924 note PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal~KEGG: maq:Maqu_1250 TetR family transcriptional regulator inference protein motif:PFAM:PF00440 db_xref GO:0003700 db_xref InterPro:IPR001647 2025798 2026949 gene locus_tag Alide2_1925 2025798 2026949 CDS product efflux transporter, RND family, MFP subunit transl_table 11 protein_id gb|AEB84303.1||gnl|jgi|Alide2_1925 note KEGG: ppd:Ppro_3851 RND family efflux transporter MFP subunit~TIGRFAM: Secretion protein HlyD~PFAM: Secretion protein HlyD inference protein motif:TFAM:TIGR01730 db_xref GO:0008565 db_xref InterPro:IPR006143 2026946 2028151 gene locus_tag Alide2_1926 2026946 2028151 CDS product protein of unknown function DUF214 transl_table 11 protein_id gb|AEB84304.1||gnl|jgi|Alide2_1926 note PFAM: Domain of unknown function DUF214, ABC transporter permease~KEGG: ppd:Ppro_3850 hypothetical protein inference protein motif:PFAM:PF02687 db_xref InterPro:IPR003838 2028153 2028863 gene locus_tag Alide2_1927 2028153 2028863 CDS product Phosphonate-transporting ATPase EC_number 3.6.3.28 transl_table 11 protein_id gb|AEB84305.1||gnl|jgi|Alide2_1927 note PFAM: ABC transporter-like~KEGG: ppd:Ppro_3849 ABC transporter related~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.28 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 2028892 2029365 gene locus_tag Alide2_1928 2028892 2029365 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84306.1||gnl|jgi|Alide2_1928 note KEGG: ppd:Ppro_3848 hypothetical protein inference similar to AA sequence:KEGG:Ppro_3848 2029352 2030839 gene locus_tag Alide2_1929 2029352 2030839 CDS product RND efflux system, outer membrane lipoprotein, NodT family transl_table 11 protein_id gb|AEB84307.1||gnl|jgi|Alide2_1929 note KEGG: maq:Maqu_1255 RND efflux system outer membrane lipoprotein~TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT~PFAM: Outer membrane efflux protein inference protein motif:TFAM:TIGR01845 db_xref GO:0005215 db_xref GO:0008289 db_xref InterPro:IPR003423 db_xref InterPro:IPR010131 2030999 2032681 gene locus_tag Alide2_1930 2030999 2032681 CDS product Integrase catalytic region transl_table 11 protein_id gb|AEB84308.1||gnl|jgi|Alide2_1930 note PFAM: Integrase, catalytic core; Transposase-like, Mu, C-terminal~KEGG: bxe:Bxe_C1173 integrase TniA inference protein motif:PFAM:PF00665 db_xref GO:0003677 db_xref InterPro:IPR001584 db_xref InterPro:IPR015378 2032684 2033592 gene locus_tag Alide2_1931 2032684 2033592 CDS product TniB family protein transl_table 11 protein_id gb|AEB84309.1||gnl|jgi|Alide2_1931 note KEGG: bxe:Bxe_C1174 transposition protein TniB~PFAM: Bacterial TniB~SMART: ATPase, AAA+ type, core inference protein motif:PFAM:PF05621 db_xref InterPro:IPR003593 db_xref InterPro:IPR008868 2033589 2034806 gene locus_tag Alide2_1932 2033589 2034806 CDS product TniQ family protein transl_table 11 protein_id gb|AEB84310.1||gnl|jgi|Alide2_1932 note KEGG: bxe:Bxe_C1175 transposition protein TniQ~manually curated~PFAM: TniQ inference protein motif:PFAM:PF06527 db_xref InterPro:IPR009492 2034867 2035037 gene locus_tag Alide2_1933 pseudo 2035040 2035489 gene locus_tag Alide2_1934 2035040 2035489 CDS product Conserved hypothetical protein CHP02391 transl_table 11 protein_id gb|AEB84311.1||gnl|jgi|Alide2_1934 note KEGG: shn:Shewana3_1247 hypothetical protein~TIGRFAM: Conserved hypothetical protein CHP02391~PFAM: Conserved hypothetical protein CHP02391 inference protein motif:TFAM:TIGR02391 db_xref InterPro:IPR012654 2036503 2035433 gene locus_tag Alide2_1935 2036503 2035433 CDS product aminoglycoside phosphotransferase transl_table 11 protein_id gb|AEB84312.1||gnl|jgi|Alide2_1935 note PFAM: Aminoglycoside phosphotransferase~KEGG: bxe:Bxe_C1178 hypothetical protein inference protein motif:PFAM:PF01636 db_xref InterPro:IPR002575 2038321 2036519 gene locus_tag Alide2_1936 2038321 2036519 CDS product Xenobiotic-transporting ATPase EC_number 3.6.3.44 transl_table 11 protein_id gb|AEB84313.1||gnl|jgi|Alide2_1936 note PFAM: ABC transporter-like; ABC transporter, transmembrane domain~KEGG: art:Arth_4258 ABC transporter-like protein~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.44 db_xref InterPro:IPR001140 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 2040144 2038318 gene locus_tag Alide2_1937 2040144 2038318 CDS product Xenobiotic-transporting ATPase EC_number 3.6.3.44 transl_table 11 protein_id gb|AEB84314.1||gnl|jgi|Alide2_1937 note PFAM: ABC transporter-like; ABC transporter, transmembrane domain~KEGG: art:Arth_4257 ABC transporter-like protein~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.44 db_xref InterPro:IPR001140 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 2040550 2040191 gene locus_tag Alide2_1938 2040550 2040191 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84315.1||gnl|jgi|Alide2_1938 note KEGG: bvi:Bcep1808_7475 hypothetical protein inference similar to AA sequence:KEGG:Bcep1808_7475 2041512 2040610 gene locus_tag Alide2_1939 2041512 2040610 CDS product protein of unknown function LppY and LpqO transl_table 11 protein_id gb|AEB84316.1||gnl|jgi|Alide2_1939 note PFAM: Uncharacterised protein family, LppY/LpqO~KEGG: pop:POPTR_594759 hypothetical protein inference protein motif:PFAM:PF07485 db_xref InterPro:IPR011094 2041965 2041585 gene locus_tag Alide2_1940 2041965 2041585 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84317.1||gnl|jgi|Alide2_1940 note KEGG: bxe:Bxe_C1203 hypothetical protein inference similar to AA sequence:KEGG:Bxe_C1203 2042448 2041990 gene locus_tag Alide2_1941 2042448 2041990 CDS product Chromate resistance exported protein transl_table 11 protein_id gb|AEB84318.1||gnl|jgi|Alide2_1941 note PFAM: Chromate resistance exported protein~KEGG: bxe:Bxe_C1204 hypothetical protein inference protein motif:PFAM:PF09828 db_xref InterPro:IPR018634 2043361 2042453 gene locus_tag Alide2_1942 2043361 2042453 CDS product Manganese/iron superoxide dismutase transl_table 11 protein_id gb|AEB84319.1||gnl|jgi|Alide2_1942 note KEGG: bxe:Bxe_C1205 putative superoxide dismutase~PFAM: Manganese/iron superoxide dismutase, C-terminal~SMART: Rhodanese-like inference protein motif:PFAM:PF02777 db_xref GO:0004784 db_xref GO:0046872 db_xref InterPro:IPR001763 db_xref InterPro:IPR019832 2044619 2043423 gene locus_tag Alide2_1943 2044619 2043423 CDS product chromate transporter, chromate ion transporter (CHR) family transl_table 11 protein_id gb|AEB84320.1||gnl|jgi|Alide2_1943 note KEGG: bxe:Bxe_C1206 chromate transporter~TIGRFAM: Chromate transporter, long chain~PFAM: Chromate transporter inference protein motif:TFAM:TIGR00937 db_xref InterPro:IPR003370 db_xref InterPro:IPR014047 2045638 2044676 gene locus_tag Alide2_1944 2045638 2044676 CDS product Chromate resistance exported protein transl_table 11 protein_id gb|AEB84321.1||gnl|jgi|Alide2_1944 note PFAM: Chromate resistance exported protein~KEGG: bxe:Bxe_C1207 putative chromate resistance protein inference protein motif:PFAM:PF09828 db_xref InterPro:IPR018634 2046800 2047393 gene locus_tag Alide2_1945 2046800 2047393 CDS product Resolvase domain protein transl_table 11 protein_id gb|AEB84322.1||gnl|jgi|Alide2_1945 note KEGG: bxe:Bxe_C1209 putative resolvase~PFAM: Resolvase, N-terminal; Protein of unknown function DUF932~SMART: Resolvase, N-terminal inference protein motif:PFAM:PF00239 db_xref GO:0000150 db_xref GO:0003677 db_xref InterPro:IPR006119 db_xref InterPro:IPR009276 2047752 2047432 gene locus_tag Alide2_1946 2047752 2047432 CDS product transposon modulator protein transl_table 11 protein_id gb|AEB84323.1||gnl|jgi|Alide2_1946 note manually curated~KEGG: bxe:Bxe_C1210 transposon modulator protein inference similar to AA sequence:KEGG:Bxe_C1210 2048004 2047768 gene locus_tag Alide2_1947 2048004 2047768 CDS product MerE family protein transl_table 11 protein_id gb|AEB84324.1||gnl|jgi|Alide2_1947 note PFAM: MerE~KEGG: bxe:Bxe_C1211 putative mercury resistance protein inference protein motif:PFAM:PF05052 db_xref InterPro:IPR007746 2048366 2048001 gene locus_tag Alide2_1948 2048366 2048001 CDS product mercuric resistance transcriptional repressor protein MerD transl_table 11 protein_id gb|AEB84325.1||gnl|jgi|Alide2_1948 note TIGRFAM: Mercuric resistence transcriptional repressor protein MerD~PFAM: HTH transcriptional regulator, MerR~KEGG: bxe:Bxe_C1212 transcriptional regulator MerD~SMART: HTH transcriptional regulator, MerR inference protein motif:TFAM:TIGR02054 db_xref GO:0003677 db_xref InterPro:IPR000551 db_xref InterPro:IPR011797 2050069 2048384 gene locus_tag Alide2_1949 2050069 2048384 CDS product mercuric reductase EC_number 1.16.1.1 transl_table 11 protein_id gb|AEB84326.1||gnl|jgi|Alide2_1949 note TIGRFAM: Mercury reductase, MerA~KEGG: bxe:Bxe_C1213 putative mercuric reductase~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Heavy metal transport/detoxification protein; Pyridine nucleotide-disulphide oxidoreductase, dimerisation inference protein motif:TFAM:TIGR02053 db_xref GO:0016152 db_xref GO:0016491 db_xref GO:0045340 db_xref GO:0050660 db_xref GO:0050661 db_xref InterPro:IPR004099 db_xref InterPro:IPR006121 db_xref InterPro:IPR013027 db_xref InterPro:IPR021179 2050533 2050108 gene locus_tag Alide2_1950 2050533 2050108 CDS product putative mercury transport protein MerC transl_table 11 protein_id gb|AEB84327.1||gnl|jgi|Alide2_1950 note KEGG: mms:mma_1750 putative mercury transport protein MerC inference similar to AA sequence:KEGG:mma_1750 2050836 2050561 gene locus_tag Alide2_1951 2050836 2050561 CDS product mercuric transport protein periplasmic component transl_table 11 protein_id gb|AEB84328.1||gnl|jgi|Alide2_1951 note KEGG: mms:mma_1751 mercuric transport periplasmic binding protein~TIGRFAM: Mercuric transport protein periplasmic component~PFAM: Heavy metal transport/detoxification protein inference protein motif:TFAM:TIGR02052 db_xref GO:0015097 db_xref GO:0045340 db_xref InterPro:IPR006121 db_xref InterPro:IPR011795 2051200 2050850 gene locus_tag Alide2_1952 2051200 2050850 CDS product Mercuric transport protein MerT transl_table 11 protein_id gb|AEB84329.1||gnl|jgi|Alide2_1952 note PFAM: Mercuric transport protein MerT~KEGG: bxe:Bxe_C1216 putative mercuric transport protein inference protein motif:PFAM:PF02411 db_xref GO:0015097 db_xref InterPro:IPR003457 2051272 2051706 gene locus_tag Alide2_1953 2051272 2051706 CDS product transcriptional regulator, MerR family transl_table 11 protein_id gb|AEB84330.1||gnl|jgi|Alide2_1953 note TIGRFAM: Hg(II)-responsive transcriptional regulator~PFAM: Transcription regulator MerR, DNA binding; HTH transcriptional regulator, MerR~KEGG: bxe:Bxe_C1217 putative transcriptional regulator MerR~SMART: HTH transcriptional regulator, MerR inference protein motif:TFAM:TIGR02051 db_xref GO:0003677 db_xref GO:0045340 db_xref InterPro:IPR000551 db_xref InterPro:IPR011794 db_xref InterPro:IPR015358 2051818 2052279 gene locus_tag Alide2_1954 pseudo 2052282 2055255 gene locus_tag Alide2_1955 pseudo 2055403 2055849 gene locus_tag Alide2_1956 2055403 2055849 CDS product integrating conjugative element protein, PFL_4709 family transl_table 11 protein_id gb|AEB84331.1||gnl|jgi|Alide2_1956 note KEGG: rpf:Rpic12D_0686 protein of unknown function DUF1525~TIGRFAM: Integrating conjugative element protein, PFL4709~PFAM: Integrating conjugative element protein, PFL4709 inference protein motif:TFAM:TIGR03757 db_xref InterPro:IPR011090 2055846 2056796 gene locus_tag Alide2_1957 2055846 2056796 CDS product integrating conjugative element protein, PFL_4710 family transl_table 11 protein_id gb|AEB84332.1||gnl|jgi|Alide2_1957 note KEGG: rpf:Rpic12D_0687 protein of unknown function DUF1527~TIGRFAM: Integrating conjugative element protein, PFL4710~PFAM: Integrating conjugative element protein, PFL4710 inference protein motif:TFAM:TIGR03756 db_xref InterPro:IPR011092 2056807 2058207 gene locus_tag Alide2_1958 2056807 2058207 CDS product integrating conjugative element protein, PFL_4711 family transl_table 11 protein_id gb|AEB84333.1||gnl|jgi|Alide2_1958 note TIGRFAM: Integrating conjugative element protein, PFL4711~KEGG: rpf:Rpic12D_0688 hypothetical protein inference protein motif:TFAM:TIGR03755 db_xref InterPro:IPR021204 2058207 2058566 gene locus_tag Alide2_1959 2058207 2058566 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84334.1||gnl|jgi|Alide2_1959 note KEGG: rpf:Rpic12D_0689 hypothetical protein inference similar to AA sequence:KEGG:Rpic12D_0689 2058590 2060107 gene locus_tag Alide2_1960 2058590 2060107 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84335.1||gnl|jgi|Alide2_1960 note KEGG: rpf:Rpic12D_0690 hypothetical protein inference similar to AA sequence:KEGG:Rpic12D_0690 2060479 2060108 gene locus_tag Alide2_1961 2060479 2060108 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84336.1||gnl|jgi|Alide2_1961 note KEGG: rpf:Rpic12D_0691 hypothetical protein inference similar to AA sequence:KEGG:Rpic12D_0691 2061066 2060602 gene locus_tag Alide2_1962 2061066 2060602 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84337.1||gnl|jgi|Alide2_1962 note KEGG: dac:Daci_4188 hypothetical protein inference similar to AA sequence:KEGG:Daci_4188 2061383 2061066 gene locus_tag Alide2_1963 2061383 2061066 CDS product transcriptional regulator, AbrB family transl_table 11 protein_id gb|AEB84338.1||gnl|jgi|Alide2_1963 note TIGRFAM: Transcription regulator AbrB~PFAM: Transcription regulator AbrB/SpoV, predicted~KEGG: dac:Daci_4189 AbrB family transcriptional regulator~SMART: Transcription regulator AbrB/SpoV, predicted inference protein motif:TFAM:TIGR01439 db_xref InterPro:IPR006339 db_xref InterPro:IPR007159 2061697 2063562 gene locus_tag Alide2_1964 2061697 2063562 CDS product integrating conjugative element relaxase, PFGI-1 class transl_table 11 protein_id gb|AEB84339.1||gnl|jgi|Alide2_1964 note KEGG: rpf:Rpic12D_0694 relaxase~TIGRFAM: Integrating conjugative element relaxase, PFGI-1 class~PFAM: Uncharacterised protein family, helicase/relaxase, putative; Domain of unknown function DUF1528, C-terminal inference protein motif:TFAM:TIGR03760 db_xref InterPro:IPR011093 db_xref InterPro:IPR011119 db_xref InterPro:IPR022391 2063894 2063589 gene locus_tag Alide2_1965 2063894 2063589 CDS product helix-turn-helix domain protein transl_table 11 protein_id gb|AEB84340.1||gnl|jgi|Alide2_1965 note KEGG: rpf:Rpic12D_0695 transcriptional regulator, XRE family~PFAM: Helix-turn-helix type 3~SMART: Helix-turn-helix type 3 inference protein motif:PFAM:PF01381 db_xref GO:0043565 db_xref InterPro:IPR001387 2064013 2064633 gene locus_tag Alide2_1966 2064013 2064633 CDS product LysR substrate-binding protein transl_table 11 protein_id gb|AEB84341.1||gnl|jgi|Alide2_1966 note PFAM: LysR, substrate-binding~KEGG: rpf:Rpic12D_0696 transcriptional regulator, LysR family inference protein motif:PFAM:PF03466 db_xref InterPro:IPR005119 2066568 2064646 gene locus_tag Alide2_1967 2066568 2064646 CDS product integrase family protein transl_table 11 protein_id gb|AEB84342.1||gnl|jgi|Alide2_1967 note PFAM: Integrase, catalytic core, phage~KEGG: dac:Daci_4139 integrase family protein inference protein motif:PFAM:PF00589 db_xref GO:0003677 db_xref InterPro:IPR002104 2066881 2066808 gene locus_tag Alide2_R0026 note tRNA-Gly4 2066881 2066808 tRNA product tRNA-Gly 2067540 2066998 gene locus_tag Alide2_1968 2067540 2066998 CDS product transcriptional regulator, BadM/Rrf2 family transl_table 11 protein_id gb|AEB84343.1||gnl|jgi|Alide2_1968 note KEGG: ajs:Ajs_1664 BadM/Rrf2 family transcriptional regulator~TIGRFAM: Transcription regulator Rrf2~PFAM: Transcription regulator Rrf2 inference protein motif:TFAM:TIGR00738 db_xref InterPro:IPR000944 2068159 2068419 gene locus_tag Alide2_1969 2068159 2068419 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84344.1||gnl|jgi|Alide2_1969 note KEGG: dia:Dtpsy_2037 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_2037 2069306 2068431 gene locus_tag Alide2_1970 2069306 2068431 CDS product Phosphatidylserine decarboxylase proenzyme transl_table 11 protein_id gb|AEB84345.1||gnl|jgi|Alide2_1970 note TIGRFAM: Phosphatidylserine decarboxylase~HAMAP: Phosphatidylserine decarboxylase~KEGG: dia:Dtpsy_2036 phosphatidylserine decarboxylase~PFAM: Phosphatidylserine decarboxylase-related inference protein motif:HAMAP:MF_00662 db_xref InterPro:IPR003817 db_xref InterPro:IPR005221 2069514 2070692 gene locus_tag Alide2_1971 2069514 2070692 CDS product CBS domain containing membrane protein transl_table 11 protein_id gb|AEB84346.1||gnl|jgi|Alide2_1971 note manually curated~PFAM: Cystathionine beta-synthase, core; HPP~KEGG: ajs:Ajs_1669 CBS domain-containing protein~SMART: Cystathionine beta-synthase, core inference protein motif:PFAM:PF00571 db_xref InterPro:IPR000644 db_xref InterPro:IPR007065 2070940 2071200 gene locus_tag Alide2_1972 2070940 2071200 CDS product translation initiation factor IF-1 transl_table 11 protein_id gb|AEB84347.1||gnl|jgi|Alide2_1972 note KEGG: dia:Dtpsy_2034 translation initiation factor IF-1~TIGRFAM: Translation initiation factor IF-1~PFAM: RNA-binding domain, S1, IF1 type inference protein motif:TFAM:TIGR00008 db_xref GO:0003743 db_xref InterPro:IPR004368 db_xref InterPro:IPR006196 db_xref InterPro:IPR022967 2071264 2071340 gene locus_tag Alide2_R0027 note tRNA-Pro1 2071264 2071340 tRNA product tRNA-Pro 2071571 2072620 gene locus_tag Alide2_1973 2071571 2072620 CDS product diguanylate cyclase transl_table 11 protein_id gb|AEB84348.1||gnl|jgi|Alide2_1973 note TIGRFAM: Diguanylate cyclase, predicted~PFAM: Diguanylate cyclase, predicted~KEGG: ajs:Ajs_4119 diguanylate cyclase~SMART: Diguanylate cyclase, predicted inference protein motif:TFAM:TIGR00254 db_xref InterPro:IPR000160 2072626 2073399 gene locus_tag Alide2_1974 2072626 2073399 CDS product protein of unknown function DUF1624 transl_table 11 protein_id gb|AEB84349.1||gnl|jgi|Alide2_1974 note PFAM: Protein of unknown function DUF1624~KEGG: ajs:Ajs_1672 hypothetical protein inference protein motif:PFAM:PF07786 db_xref InterPro:IPR012429 2073713 2073411 gene locus_tag Alide2_1975 2073713 2073411 CDS product integration host factor, beta subunit transl_table 11 protein_id gb|AEB84350.1||gnl|jgi|Alide2_1975 note TIGRFAM: Integration host factor, beta subunit~PFAM: Histone-like bacterial DNA-binding protein~KEGG: dia:Dtpsy_1390 integration host factor, beta subunit~SMART: Histone-like bacterial DNA-binding protein inference protein motif:TFAM:TIGR00988 db_xref GO:0003677 db_xref InterPro:IPR000119 db_xref InterPro:IPR005685 2075518 2073833 gene locus_tag Alide2_1976 2075518 2073833 CDS product ribosomal protein S1 transl_table 11 protein_id gb|AEB84351.1||gnl|jgi|Alide2_1976 note TIGRFAM: Ribosomal S1 synthesis/modification protein~PFAM: Ribosomal protein S1, RNA-binding domain~KEGG: dia:Dtpsy_1391 30S ribosomal protein S1~SMART: RNA-binding domain, S1 inference protein motif:TFAM:TIGR00717 db_xref InterPro:IPR003029 db_xref InterPro:IPR018032 db_xref InterPro:IPR022967 2077723 2075699 gene locus_tag Alide2_1977 2077723 2075699 CDS product Cytidylate kinase EC_number 2.7.4.14 EC_number 2.5.1.19 transl_table 11 protein_id gb|AEB84352.1||gnl|jgi|Alide2_1977 note PFAM: Enolpyruvate transferase domain; Cytidylate kinase domain~TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; Cytidylate kinase~HAMAP: Cytidylate kinase; 3-phosphoshikimate 1-carboxyvinyltransferase~KEGG: dia:Dtpsy_1392 bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidine monophosphate kinase inference protein motif:HAMAP:MF_00238 db_xref InterPro:IPR001986 db_xref InterPro:IPR003136 db_xref InterPro:IPR006264 db_xref InterPro:IPR011994 2078607 2077723 gene locus_tag Alide2_1978 2078607 2077723 CDS product Prephenate dehydrogenase EC_number 1.3.1.12 transl_table 11 protein_id gb|AEB84353.1||gnl|jgi|Alide2_1978 note KEGG: dia:Dtpsy_1393 prephenate dehydrogenase~PFAM: Prephenate dehydrogenase inference protein motif:PRIAM:1.3.1.12 db_xref InterPro:IPR003099 2079718 2078618 gene locus_tag Alide2_1979 2079718 2078618 CDS product chorismate mutase transl_table 11 protein_id gb|AEB84354.1||gnl|jgi|Alide2_1979 note TIGRFAM: Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain~PFAM: Prephenate dehydratase; Chorismate mutase, type II; Amino acid-binding ACT~KEGG: dia:Dtpsy_1394 chorismate mutase~SMART: Chorismate mutase inference protein motif:TFAM:TIGR01807 db_xref GO:0004106 db_xref InterPro:IPR001086 db_xref InterPro:IPR002701 db_xref InterPro:IPR002912 db_xref InterPro:IPR010957 db_xref InterPro:IPR020822 2080946 2079837 gene locus_tag Alide2_1980 2080946 2079837 CDS product Phosphoserine aminotransferase EC_number 2.6.1.52 transl_table 11 protein_id gb|AEB84355.1||gnl|jgi|Alide2_1980 note PFAM: Aminotransferase, class V/Cysteine desulfurase~TIGRFAM: Phosphoserine aminotransferase, subgroup~HAMAP: Phosphoserine aminotransferase~KEGG: dia:Dtpsy_1395 phosphoserine aminotransferase inference protein motif:HAMAP:MF_00160 db_xref InterPro:IPR000192 db_xref InterPro:IPR003248 db_xref InterPro:IPR022278 2083703 2081013 gene locus_tag Alide2_1981 2083703 2081013 CDS product DNA gyrase, A subunit EC_number 5.99.1.3 transl_table 11 protein_id gb|AEB84356.1||gnl|jgi|Alide2_1981 note SMART: DNA topoisomerase, type IIA, subunit A/C-terminal~TIGRFAM: DNA gyrase, subunit A~KEGG: ajs:Ajs_2464 DNA gyrase subunit A~PFAM: DNA topoisomerase, type IIA, subunit A/C-terminal; DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel inference protein motif:TFAM:TIGR01063 db_xref GO:0003677 db_xref GO:0003918 db_xref GO:0005524 db_xref InterPro:IPR002205 db_xref InterPro:IPR005743 db_xref InterPro:IPR006691 2083880 2084539 gene locus_tag Alide2_1982 2083880 2084539 CDS product OmpA/MotB domain protein transl_table 11 protein_id gb|AEB84357.1||gnl|jgi|Alide2_1982 note PFAM: Outer membrane protein, OmpA/MotB, C-terminal~KEGG: dia:Dtpsy_1397 OmpA/MotB domain protein inference protein motif:PFAM:PF00691 db_xref InterPro:IPR006665 2084619 2085332 gene locus_tag Alide2_1983 2084619 2085332 CDS product ubiquinone biosynthesis O-methyltransferase EC_number 2.1.1.64 transl_table 11 protein_id gb|AEB84358.1||gnl|jgi|Alide2_1983 note TIGRFAM: Ubiquinone biosynthesis O-methyltransferase~KEGG: dia:Dtpsy_1398 3-demethylubiquinone-9 3-methyltransferase~PFAM: Methyltransferase type 11 inference protein motif:TFAM:TIGR01983 db_xref GO:0008425 db_xref InterPro:IPR010233 db_xref InterPro:IPR013216 2085329 2086006 gene locus_tag Alide2_1984 2085329 2086006 CDS product phosphoglycolate phosphatase EC_number 3.1.3.18 transl_table 11 protein_id gb|AEB84359.1||gnl|jgi|Alide2_1984 note TIGRFAM: 2-phosphoglycolate phosphatase, prokaryotic; HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3~KEGG: ajs:Ajs_2461 phosphoglycolate phosphatase~PFAM: Haloacid dehalogenase-like hydrolase inference protein motif:TFAM:TIGR01449 db_xref GO:0008967 db_xref GO:0016787 db_xref InterPro:IPR005834 db_xref InterPro:IPR006346 db_xref InterPro:IPR006402 db_xref InterPro:IPR006439 2086019 2086395 gene gene ssrA locus_tag Alide2_R0028 2086019 2086395 tmRNA note tmRNA as predicted by Rfam (RF00023), score 196.22 2087590 2086706 gene locus_tag Alide2_1985 2087590 2086706 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB84360.1||gnl|jgi|Alide2_1985 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: bvi:Bcep1808_7210 LysR family transcriptional regulator inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 2088597 2087587 gene locus_tag Alide2_1986 2088597 2087587 CDS product Phosphonate dehydrogenase EC_number 1.20.1.1 transl_table 11 protein_id gb|AEB84361.1||gnl|jgi|Alide2_1986 note KEGG: bvi:Bcep1808_7212 phosphonate dehydrogenase~PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain inference protein motif:PRIAM:1.20.1.1 db_xref InterPro:IPR006139 db_xref InterPro:IPR006140 2089419 2088622 gene locus_tag Alide2_1987 2089419 2088622 CDS product phosphonate ABC transporter, inner membrane subunit transl_table 11 protein_id gb|AEB84362.1||gnl|jgi|Alide2_1987 note KEGG: mms:mma_3042 phosphonate ABC-type transport system permease protein~TIGRFAM: Phosphonate uptake transporter~PFAM: Binding-protein-dependent transport systems inner membrane component inference protein motif:TFAM:TIGR01097 db_xref GO:0015604 db_xref InterPro:IPR000515 db_xref InterPro:IPR005769 2090292 2089432 gene locus_tag Alide2_1988 2090292 2089432 CDS product phosphonate ABC transporter, periplasmic phosphonate-binding protein transl_table 11 protein_id gb|AEB84363.1||gnl|jgi|Alide2_1988 note TIGRFAM: Phosphonate-binding periplasmic protein~KEGG: mms:mma_3041 phosphonate ABC-type transport system substrate-binding protein inference protein motif:TFAM:TIGR01098 db_xref GO:0015604 db_xref InterPro:IPR005770 2091113 2090316 gene locus_tag Alide2_1989 2091113 2090316 CDS product phosphonate ABC transporter, ATPase subunit EC_number 3.6.3.28 transl_table 11 protein_id gb|AEB84364.1||gnl|jgi|Alide2_1989 note SMART: ATPase, AAA+ type, core~TIGRFAM: ABC transporter, phosphonate import, PhnC~KEGG: mms:mma_3040 phosphonate ABC-type transport system ATP-binding protein~PFAM: ABC transporter-like inference protein motif:TFAM:TIGR02315 db_xref GO:0005524 db_xref GO:0015416 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 db_xref InterPro:IPR012693 2091367 2092086 gene locus_tag Alide2_1990 2091367 2092086 CDS product Domain of unknown function DUF88 transl_table 11 protein_id gb|AEB84365.1||gnl|jgi|Alide2_1990 note PFAM: Domain of unknown function DUF88~KEGG: cvi:CV_0373 hypothetical protein inference protein motif:PFAM:PF01936 db_xref InterPro:IPR021139 2092663 2092184 gene locus_tag Alide2_1991 2092663 2092184 CDS product putative bacteriophage-related protein transl_table 11 protein_id gb|AEB84366.1||gnl|jgi|Alide2_1991 note KEGG: rsl:RPSI07_0201 putative bacteriophage-related protein inference similar to AA sequence:KEGG:RPSI07_0201 2093031 2092660 gene locus_tag Alide2_1992 2093031 2092660 CDS product putative bacteriophage-related protein transl_table 11 protein_id gb|AEB84367.1||gnl|jgi|Alide2_1992 note KEGG: rsl:RPSI07_0202 putative bacteriophage-related protein inference similar to AA sequence:KEGG:RPSI07_0202 2094410 2093031 gene locus_tag Alide2_1993 2094410 2093031 CDS product Resolvase domain protein transl_table 11 protein_id gb|AEB84368.1||gnl|jgi|Alide2_1993 note KEGG: nde:NIDE0070 putative site-specific recombinase, resolvase family (phage related)~PFAM: Resolvase, N-terminal; Recombinase~SMART: Resolvase, N-terminal inference protein motif:PFAM:PF00239 db_xref GO:0000150 db_xref GO:0003677 db_xref InterPro:IPR006119 db_xref InterPro:IPR011109 2094856 2094407 gene locus_tag Alide2_1994 2094856 2094407 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84369.1||gnl|jgi|Alide2_1994 note KEGG: mfa:Mfla_1156 hypothetical protein inference similar to AA sequence:KEGG:Mfla_1156 2095047 2094856 gene locus_tag Alide2_1995 2095047 2094856 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84370.1||gnl|jgi|Alide2_1995 note KEGG: mfa:Mfla_1157 hypothetical protein inference similar to AA sequence:KEGG:Mfla_1157 2095228 2095506 gene locus_tag Alide2_1996 2095228 2095506 CDS product helix-turn-helix domain protein transl_table 11 protein_id gb|AEB84371.1||gnl|jgi|Alide2_1996 note KEGG: sml:Smlt1898 putative HTH transcriptional regulator~PFAM: Helix-turn-helix type 3~SMART: Helix-turn-helix type 3 inference protein motif:PFAM:PF01381 db_xref GO:0043565 db_xref InterPro:IPR001387 2095507 2096319 gene locus_tag Alide2_1997 2095507 2096319 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84372.1||gnl|jgi|Alide2_1997 note KEGG: nde:NIDE0076 hypothetical protein inference similar to AA sequence:KEGG:NIDE0076 2096420 2097844 gene locus_tag Alide2_1998 2096420 2097844 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84373.1||gnl|jgi|Alide2_1998 note KEGG: nde:NIDE0077 hypothetical protein inference similar to AA sequence:KEGG:NIDE0077 2097856 2098794 gene locus_tag Alide2_1999 2097856 2098794 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84374.1||gnl|jgi|Alide2_1999 note KEGG: nde:NIDE0078 hypothetical protein inference similar to AA sequence:KEGG:NIDE0078 2098880 2099137 gene locus_tag Alide2_2000 2098880 2099137 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84375.1||gnl|jgi|Alide2_2000 note KEGG: mca:MCA2640 hypothetical protein inference similar to AA sequence:KEGG:MCA2640 2099149 2099631 gene locus_tag Alide2_2001 2099149 2099631 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84376.1||gnl|jgi|Alide2_2001 note KEGG: mms:mma_2689 hypothetical protein inference similar to AA sequence:KEGG:mma_2689 2099628 2100476 gene locus_tag Alide2_2002 2099628 2100476 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84377.1||gnl|jgi|Alide2_2002 note KEGG: nde:NIDE0081 hypothetical protein inference similar to AA sequence:KEGG:NIDE0081 2100482 2101105 gene locus_tag Alide2_2003 2100482 2101105 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84378.1||gnl|jgi|Alide2_2003 note KEGG: dia:Dtpsy_3225 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_3225 2101117 2101971 gene locus_tag Alide2_2004 2101117 2101971 CDS product Domain of unknown function P63C-containing protein transl_table 11 protein_id gb|AEB84379.1||gnl|jgi|Alide2_2004 note PFAM: Uncharacterised protein domain P63C~KEGG: nde:NIDE0083 hypothetical protein inference protein motif:PFAM:PF10546 db_xref InterPro:IPR018874 2101968 2102468 gene locus_tag Alide2_2005 2101968 2102468 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84380.1||gnl|jgi|Alide2_2005 note KEGG: nde:NIDE0084 hypothetical protein inference similar to AA sequence:KEGG:NIDE0084 2102465 2103199 gene locus_tag Alide2_2006 2102465 2103199 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84381.1||gnl|jgi|Alide2_2006 note KEGG: dia:Dtpsy_3223 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_3223 2103196 2103441 gene locus_tag Alide2_2007 2103196 2103441 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84382.1||gnl|jgi|Alide2_2007 note KEGG: nde:NIDE0086 hypothetical protein inference similar to AA sequence:KEGG:NIDE0086 2103438 2105738 gene locus_tag Alide2_2008 2103438 2105738 CDS product phage/plasmid primase, P4 family transl_table 11 protein_id gb|AEB84383.1||gnl|jgi|Alide2_2008 note TIGRFAM: DNA primase, phage/plasmid~PFAM: Phage/plasmid primase, P4, C-terminal~KEGG: dia:Dtpsy_3221 hypothetical protein~SMART: Phage/plasmid primase, P4, C-terminal inference protein motif:TFAM:TIGR01613 db_xref InterPro:IPR006500 db_xref InterPro:IPR014818 2105880 2106356 gene locus_tag Alide2_2009 2105880 2106356 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84384.1||gnl|jgi|Alide2_2009 note KEGG: dia:Dtpsy_3220 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_3220 2106358 2106561 gene locus_tag Alide2_2010 2106358 2106561 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84385.1||gnl|jgi|Alide2_2010 note KEGG: mms:mma_2698 hypothetical protein inference similar to AA sequence:KEGG:mma_2698 2106554 2106970 gene locus_tag Alide2_2011 2106554 2106970 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84386.1||gnl|jgi|Alide2_2011 note KEGG: sml:Smlt1883 hypothetical protein inference similar to AA sequence:KEGG:Smlt1883 2107316 2108731 gene locus_tag Alide2_2012 2107316 2108731 CDS product DNA methylase N-4/N-6 domain protein transl_table 11 protein_id gb|AEB84387.1||gnl|jgi|Alide2_2012 note KEGG: dia:Dtpsy_3217 DNA methylase N-4/N-6 domain protein~PFAM: DNA methylase N-4/N-6; ParB-like nuclease~SMART: ParB-like nuclease inference protein motif:PFAM:PF01555 db_xref GO:0003677 db_xref GO:0008170 db_xref InterPro:IPR002941 db_xref InterPro:IPR003115 2108728 2109990 gene locus_tag Alide2_2013 2108728 2109990 CDS product DNA methylase N-4/N-6 domain protein transl_table 11 protein_id gb|AEB84388.1||gnl|jgi|Alide2_2013 note KEGG: dia:Dtpsy_3216 DNA methylase N-4/N-6 domain protein~PFAM: DNA methylase N-4/N-6; ParB-like nuclease~SMART: ParB-like nuclease inference protein motif:PFAM:PF01555 db_xref GO:0003677 db_xref GO:0008170 db_xref InterPro:IPR002941 db_xref InterPro:IPR003115 2110322 2109954 gene locus_tag Alide2_2014 2110322 2109954 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84389.1||gnl|jgi|Alide2_2014 note KEGG: mms:mma_2759 hypothetical protein inference similar to AA sequence:KEGG:mma_2759 2110941 2110420 gene locus_tag Alide2_2015 2110941 2110420 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84390.1||gnl|jgi|Alide2_2015 note KEGG: mms:mma_2762 hypothetical protein inference similar to AA sequence:KEGG:mma_2762 2111243 2111037 gene locus_tag Alide2_2016 2111243 2111037 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84391.1||gnl|jgi|Alide2_2016 note KEGG: dia:Dtpsy_3211 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_3211 2111350 2111895 gene locus_tag Alide2_2017 2111350 2111895 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84392.1||gnl|jgi|Alide2_2017 note KEGG: sml:Smlt1874 hypothetical protein inference similar to AA sequence:KEGG:Smlt1874 2111895 2113853 gene locus_tag Alide2_2018 2111895 2113853 CDS product terminase GpA transl_table 11 protein_id gb|AEB84393.1||gnl|jgi|Alide2_2018 note PFAM: Phage terminase GpA~KEGG: dia:Dtpsy_3209 terminase GpA inference protein motif:PFAM:PF05876 db_xref InterPro:IPR008866 2113883 2114374 gene locus_tag Alide2_2019 2113883 2114374 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84394.1||gnl|jgi|Alide2_2019 note KEGG: mms:mma_2706 hypothetical protein inference similar to AA sequence:KEGG:mma_2706 2114374 2114766 gene locus_tag Alide2_2020 2114374 2114766 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84395.1||gnl|jgi|Alide2_2020 note KEGG: mms:mma_2767 hypothetical protein inference similar to AA sequence:KEGG:mma_2767 2114766 2114987 gene locus_tag Alide2_2021 2114766 2114987 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84396.1||gnl|jgi|Alide2_2021 note KEGG: rsl:RPSI07_0240 hypothetical protein inference similar to AA sequence:KEGG:RPSI07_0240 2114989 2116503 gene locus_tag Alide2_2022 2114989 2116503 CDS product phage portal protein, lambda family transl_table 11 protein_id gb|AEB84397.1||gnl|jgi|Alide2_2022 note manually curated~TIGRFAM: Phage portal protein, lambda~KEGG: dia:Dtpsy_3207 phage portal protein, lambda family~PFAM: Phage portal protein, lambda inference protein motif:TFAM:TIGR01539 db_xref GO:0003677 db_xref InterPro:IPR006429 2116537 2117778 gene locus_tag Alide2_2023 2116537 2117778 CDS product peptidase S49 transl_table 11 protein_id gb|AEB84398.1||gnl|jgi|Alide2_2023 note PFAM: Peptidase S49~KEGG: dia:Dtpsy_3206 peptidase S49 inference protein motif:PFAM:PF01343 db_xref GO:0008233 db_xref InterPro:IPR002142 2117780 2118157 gene locus_tag Alide2_2024 2117780 2118157 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84399.1||gnl|jgi|Alide2_2024 note KEGG: dia:Dtpsy_3205 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_3205 2118160 2119164 gene locus_tag Alide2_2025 2118160 2119164 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84400.1||gnl|jgi|Alide2_2025 note KEGG: dia:Dtpsy_3204 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_3204 2119164 2119466 gene locus_tag Alide2_2026 2119164 2119466 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84401.1||gnl|jgi|Alide2_2026 note KEGG: dia:Dtpsy_3203 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_3203 2119471 2119917 gene locus_tag Alide2_2027 2119471 2119917 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84402.1||gnl|jgi|Alide2_2027 note KEGG: dia:Dtpsy_3202 signal peptide protein inference similar to AA sequence:KEGG:Dtpsy_3202 2119923 2120144 gene locus_tag Alide2_2028 2119923 2120144 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84403.1||gnl|jgi|Alide2_2028 note KEGG: dia:Dtpsy_3201 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_3201 2120141 2120893 gene locus_tag Alide2_2029 2120141 2120893 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84404.1||gnl|jgi|Alide2_2029 note KEGG: dia:Dtpsy_3200 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_3200 2120905 2121303 gene locus_tag Alide2_2030 2120905 2121303 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84405.1||gnl|jgi|Alide2_2030 note KEGG: dia:Dtpsy_3199 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_3199 2121300 2121509 gene locus_tag Alide2_2031 2121300 2121509 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84406.1||gnl|jgi|Alide2_2031 note manually curated~KEGG: rso:RSc0865 hypothetical protein inference similar to AA sequence:KEGG:RSc0865 2121484 2122128 gene locus_tag Alide2_2032 2121484 2122128 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84407.1||gnl|jgi|Alide2_2032 note KEGG: dia:Dtpsy_3198 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_3198 2122130 2126167 gene locus_tag Alide2_2033 2122130 2126167 CDS product phage tape measure protein transl_table 11 protein_id gb|AEB84408.1||gnl|jgi|Alide2_2033 note TIGRFAM: Tape measure domain~KEGG: dia:Dtpsy_3197 phage tape measure protein inference protein motif:TFAM:TIGR02675 db_xref InterPro:IPR013491 2126204 2126614 gene locus_tag Alide2_2034 2126204 2126614 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84409.1||gnl|jgi|Alide2_2034 note KEGG: dia:Dtpsy_3196 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_3196 2126614 2130222 gene locus_tag Alide2_2035 2126614 2130222 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84410.1||gnl|jgi|Alide2_2035 note KEGG: dia:Dtpsy_3195 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_3195 2130270 2131535 gene locus_tag Alide2_2036 2130270 2131535 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84411.1||gnl|jgi|Alide2_2036 note KEGG: dia:Dtpsy_3194 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_3194 2131539 2132624 gene locus_tag Alide2_2037 2131539 2132624 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84412.1||gnl|jgi|Alide2_2037 note KEGG: mca:MCA2674 hypothetical protein inference similar to AA sequence:KEGG:MCA2674 2132621 2133016 gene locus_tag Alide2_2038 2132621 2133016 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84413.1||gnl|jgi|Alide2_2038 note KEGG: mca:MCA2675 hypothetical protein inference similar to AA sequence:KEGG:MCA2675 2133020 2135047 gene locus_tag Alide2_2039 2133020 2135047 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84414.1||gnl|jgi|Alide2_2039 note KEGG: dia:Dtpsy_3191 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_3191 2135040 2135261 gene locus_tag Alide2_2040 2135040 2135261 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84415.1||gnl|jgi|Alide2_2040 note KEGG: dia:Dtpsy_3190 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_3190 2135328 2135633 gene locus_tag Alide2_2041 2135328 2135633 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84416.1||gnl|jgi|Alide2_2041 note KEGG: mms:mma_2786 hypothetical protein inference similar to AA sequence:KEGG:mma_2786 2135630 2135857 gene locus_tag Alide2_2042 2135630 2135857 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84417.1||gnl|jgi|Alide2_2042 note KEGG: nde:NIDE0123 hypothetical protein inference similar to AA sequence:KEGG:NIDE0123 2135854 2136354 gene locus_tag Alide2_2043 2135854 2136354 CDS product glycoside hydrolase family 24 transl_table 11 protein_id gb|AEB84418.1||gnl|jgi|Alide2_2043 note PFAM: Glycoside hydrolase, family 24~KEGG: sml:Smlt1851 putative glycosidase inference protein motif:PFAM:PF00959 db_xref GO:0003796 db_xref InterPro:IPR002196 2136351 2136848 gene locus_tag Alide2_2044 2136351 2136848 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84419.1||gnl|jgi|Alide2_2044 note KEGG: nde:NIDE0125 hypothetical protein inference similar to AA sequence:KEGG:NIDE0125 2136957 2137247 gene locus_tag Alide2_2045 2136957 2137247 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84420.1||gnl|jgi|Alide2_2045 note KEGG: rso:RSc3214 hypothetical protein inference similar to AA sequence:KEGG:RSc3214 2138199 2137252 gene locus_tag Alide2_2046 2138199 2137252 CDS product protein of unknown function DUF511 transl_table 11 protein_id gb|AEB84421.1||gnl|jgi|Alide2_2046 note PFAM: Protein of unknown function DUF511~KEGG: dno:DNO_0218 hypothetical protein inference protein motif:PFAM:PF04373 db_xref InterPro:IPR007468 2138988 2138212 gene locus_tag Alide2_2047 2138988 2138212 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84422.1||gnl|jgi|Alide2_2047 note KEGG: bav:BAV0365 hypothetical protein inference similar to AA sequence:KEGG:BAV0365 2139532 2138993 gene locus_tag Alide2_2048 2139532 2138993 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84423.1||gnl|jgi|Alide2_2048 note manually curated~KEGG: pol:Bpro_1539 hypothetical protein inference similar to AA sequence:KEGG:Bpro_1539 2142611 2139540 gene locus_tag Alide2_2049 2142611 2139540 CDS product Restriction endonuclease, type I, EcoRI, R subunit/Type III transl_table 11 protein_id gb|AEB84424.1||gnl|jgi|Alide2_2049 note KEGG: xfm:Xfasm12_2267 type I restriction-modification system endonuclease~PFAM: Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit~SMART: DEAD-like helicase, N-terminal inference protein motif:PFAM:PF04313 db_xref GO:0003677 db_xref GO:0004519 db_xref GO:0005524 db_xref GO:0016787 db_xref InterPro:IPR006935 db_xref InterPro:IPR007409 db_xref InterPro:IPR014001 2144022 2142598 gene locus_tag Alide2_2050 2144022 2142598 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84425.1||gnl|jgi|Alide2_2050 note KEGG: mca:MCA0277 hypothetical protein inference similar to AA sequence:KEGG:MCA0277 2146406 2144022 gene locus_tag Alide2_2051 2146406 2144022 CDS product N-6 DNA methylase transl_table 11 protein_id gb|AEB84426.1||gnl|jgi|Alide2_2051 note PFAM: DNA methylase, adenine-specific~KEGG: xfn:XfasM23_2177 N-6 DNA methylase inference protein motif:PFAM:PF02384 db_xref GO:0003677 db_xref GO:0008170 db_xref InterPro:IPR003356 2148136 2146418 gene locus_tag Alide2_2052 2148136 2146418 CDS product protein of unknown function DUF262 transl_table 11 protein_id gb|AEB84427.1||gnl|jgi|Alide2_2052 note PFAM: Domain of unknown function DUF262; Domain of unknown function DUF1524 RloF~KEGG: gca:Galf_1217 hypothetical protein inference protein motif:PFAM:PF03235 db_xref InterPro:IPR004919 db_xref InterPro:IPR011089 2149051 2148152 gene locus_tag Alide2_2053 2149051 2148152 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84428.1||gnl|jgi|Alide2_2053 note KEGG: vei:Veis_2419 hypothetical protein inference similar to AA sequence:KEGG:Veis_2419 2149260 2149664 gene locus_tag Alide2_2054 2149260 2149664 CDS product glycoside hydrolase family 24 transl_table 11 protein_id gb|AEB84429.1||gnl|jgi|Alide2_2054 note PFAM: Glycoside hydrolase, family 24~KEGG: mms:mma_2788 phage-related lysozyme inference protein motif:PFAM:PF00959 db_xref GO:0003796 db_xref InterPro:IPR002196 2150900 2149746 gene locus_tag Alide2_2055 2150900 2149746 CDS product peptidase S1 and S6 chymotrypsin/Hap transl_table 11 protein_id gb|AEB84430.1||gnl|jgi|Alide2_2055 note KEGG: mfa:Mfla_1158 DegP2 peptidase~PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF~SMART: PDZ/DHR/GLGF inference protein motif:PFAM:PF00089 db_xref GO:0004252 db_xref GO:0005515 db_xref InterPro:IPR001254 db_xref InterPro:IPR001478 2151889 2150924 gene locus_tag Alide2_2056 2151889 2150924 CDS product peptidase M48 Ste24p transl_table 11 protein_id gb|AEB84431.1||gnl|jgi|Alide2_2056 note PFAM: Peptidase M48~KEGG: mfa:Mfla_1159 peptidase M48, Ste24p inference protein motif:PFAM:PF01435 db_xref GO:0004222 db_xref InterPro:IPR001915 2152367 2151897 gene locus_tag Alide2_2057 2152367 2151897 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84432.1||gnl|jgi|Alide2_2057 note KEGG: mfa:Mfla_1160 hypothetical protein inference similar to AA sequence:KEGG:Mfla_1160 2152883 2152443 gene locus_tag Alide2_2058 2152883 2152443 CDS product thioredoxin EC_number 1.8.1.8 transl_table 11 protein_id gb|AEB84433.1||gnl|jgi|Alide2_2058 note TIGRFAM: Thioredoxin~KEGG: dde:Dde_3416 thioredoxin~PFAM: Thioredoxin domain inference protein motif:TFAM:TIGR01068 db_xref GO:0009055 db_xref GO:0015035 db_xref InterPro:IPR005746 db_xref InterPro:IPR013766 2154763 2152880 gene locus_tag Alide2_2059 2154763 2152880 CDS product ATP-dependent metalloprotease FtsH EC_number 3.6.4.3 transl_table 11 protein_id gb|AEB84434.1||gnl|jgi|Alide2_2059 note SMART: ATPase, AAA+ type, core~TIGRFAM: Peptidase M41, FtsH~KEGG: dde:Dde_3415 FtsH-2 peptidase~PFAM: Peptidase M41; ATPase, AAA-type, core; Peptidase M41, FtsH extracellular inference protein motif:TFAM:TIGR01241 db_xref GO:0004222 db_xref InterPro:IPR000642 db_xref InterPro:IPR003593 db_xref InterPro:IPR003959 db_xref InterPro:IPR005936 db_xref InterPro:IPR011546 2156221 2154791 gene locus_tag Alide2_2060 2156221 2154791 CDS product phospholipase D/Transphosphatidylase transl_table 11 protein_id gb|AEB84435.1||gnl|jgi|Alide2_2060 note KEGG: rpf:Rpic12D_0625 phospholipase D/transphosphatidylase~PFAM: Phospholipase D/Transphosphatidylase~SMART: Phospholipase D/Transphosphatidylase inference protein motif:PFAM:PF00614 db_xref GO:0003824 db_xref InterPro:IPR001736 2159088 2156239 gene locus_tag Alide2_2061 2159088 2156239 CDS product ATPase AAA-2 domain protein transl_table 11 protein_id gb|AEB84436.1||gnl|jgi|Alide2_2061 note KEGG: mfa:Mfla_1170 ATPase AAA-2~PFAM: ATPase, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal~SMART: ATPase, AAA+ type, core inference protein motif:PFAM:PF07724 db_xref GO:0005515 db_xref GO:0005524 db_xref InterPro:IPR003593 db_xref InterPro:IPR003959 db_xref InterPro:IPR004176 db_xref InterPro:IPR013093 db_xref InterPro:IPR019489 2159751 2159182 gene locus_tag Alide2_2062 2159751 2159182 CDS product heat shock protein Hsp20 transl_table 11 protein_id gb|AEB84437.1||gnl|jgi|Alide2_2062 note PFAM: Heat shock protein Hsp20~KEGG: rpf:Rpic12D_0629 heat shock protein HSP20 inference protein motif:PFAM:PF00011 db_xref InterPro:IPR002068 2160065 2159784 gene locus_tag Alide2_2063 2160065 2159784 CDS product DNA binding domain protein, excisionase family transl_table 11 protein_id gb|AEB84438.1||gnl|jgi|Alide2_2063 note manually curated~TIGRFAM: Excisionase/Xis, DNA-binding~KEGG: mfa:Mfla_1172 phage transcriptional regulator, AlpA~PFAM: Prophage CP4-57 regulatory inference protein motif:TFAM:TIGR01764 db_xref GO:0003677 db_xref InterPro:IPR010093 db_xref InterPro:IPR010260 2160457 2160293 gene locus_tag Alide2_2064 pseudo 2161476 2160805 gene locus_tag Alide2_2065 2161476 2160805 CDS product protein of unknown function DUF159 transl_table 11 protein_id gb|AEB84439.1||gnl|jgi|Alide2_2065 note PFAM: Protein of unknown function DUF159~KEGG: tin:Tint_2914 protein of unknown function DUF159 inference protein motif:PFAM:PF02586 db_xref InterPro:IPR003738 2161532 2162017 gene locus_tag Alide2_2066 2161532 2162017 CDS product Peptidase S24/S26A/S26B, conserved region transl_table 11 protein_id gb|AEB84440.1||gnl|jgi|Alide2_2066 note PFAM: Peptidase S24/S26A/S26B, conserved region~KEGG: tin:Tint_2913 peptidase S24/S26A/S26B, conserved region inference protein motif:PFAM:PF00717 db_xref InterPro:IPR019759 2162017 2163303 gene locus_tag Alide2_2067 2162017 2163303 CDS product DNA-directed DNA polymerase EC_number 2.7.7.7 transl_table 11 protein_id gb|AEB84441.1||gnl|jgi|Alide2_2067 note KEGG: tin:Tint_2912 DNA-directed DNA polymerase~PFAM: DNA-repair protein, UmuC-like inference protein motif:PRIAM:2.7.7.7 db_xref InterPro:IPR001126 2163764 2163300 gene locus_tag Alide2_2068 2163764 2163300 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84442.1||gnl|jgi|Alide2_2068 note KEGG: mca:MCA2632 hypothetical protein inference similar to AA sequence:KEGG:MCA2632 2164147 2163761 gene locus_tag Alide2_2069 2164147 2163761 CDS product site-specific recombinase resolvase family protein, truncation transl_table 11 protein_id gb|AEB84443.1||gnl|jgi|Alide2_2069 note KEGG: mca:MCA2633 prophage LambdaMc01, site-specific recombinase resolvase family protein, truncation inference similar to AA sequence:KEGG:MCA2633 2165523 2164144 gene locus_tag Alide2_2070 2165523 2164144 CDS product Resolvase domain protein transl_table 11 protein_id gb|AEB84444.1||gnl|jgi|Alide2_2070 note KEGG: mca:MCA2634 prophage LambdaMc01, site-specific recombinase resolvase family protein~PFAM: Resolvase, N-terminal; Recombinase~SMART: Resolvase, N-terminal inference protein motif:PFAM:PF00239 db_xref GO:0000150 db_xref GO:0003677 db_xref InterPro:IPR006119 db_xref InterPro:IPR011109 2165969 2165523 gene locus_tag Alide2_2071 2165969 2165523 CDS product Protein of unknown function DUF2924 transl_table 11 protein_id gb|AEB84445.1||gnl|jgi|Alide2_2071 note PFAM: Protein of unknown function DUF2924~KEGG: mca:MCA2635 hypothetical protein inference protein motif:PFAM:PF11149 db_xref InterPro:IPR021322 2166160 2165966 gene locus_tag Alide2_2072 2166160 2165966 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84446.1||gnl|jgi|Alide2_2072 note KEGG: mca:MCA2636 hypothetical protein inference similar to AA sequence:KEGG:MCA2636 2166340 2166618 gene locus_tag Alide2_2073 2166340 2166618 CDS product helix-turn-helix domain protein transl_table 11 protein_id gb|AEB84447.1||gnl|jgi|Alide2_2073 note KEGG: sml:Smlt1898 putative HTH transcriptional regulator~PFAM: Helix-turn-helix type 3~SMART: Helix-turn-helix type 3 inference protein motif:PFAM:PF01381 db_xref GO:0043565 db_xref InterPro:IPR001387 2166619 2166882 gene locus_tag Alide2_2074 2166619 2166882 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84448.1||gnl|jgi|Alide2_2074 note KEGG: nde:NIDE0076 hypothetical protein inference similar to AA sequence:KEGG:NIDE0076 2167005 2166892 gene locus_tag Alide2_2075 pseudo 2167055 2167378 gene locus_tag Alide2_2076 2167055 2167378 CDS product transposase IS3/IS911 family protein transl_table 11 protein_id gb|AEB84449.1||gnl|jgi|Alide2_2076 note PFAM: Transposase IS3/IS911family~KEGG: ajs:Ajs_0906 transposase IS3/IS911 family protein inference protein motif:PFAM:PF01527 db_xref GO:0003677 db_xref GO:0004803 db_xref InterPro:IPR002514 2167375 2168289 gene locus_tag Alide2_2077 2167375 2168289 CDS product Integrase catalytic region transl_table 11 protein_id gb|AEB84450.1||gnl|jgi|Alide2_2077 note PFAM: Integrase, catalytic core~KEGG: rpf:Rpic12D_2820 integrase catalytic region inference protein motif:PFAM:PF00665 db_xref GO:0003677 db_xref InterPro:IPR001584 2169278 2168352 gene locus_tag Alide2_2078 2169278 2168352 CDS product Glutaminase EC_number 3.5.1.2 transl_table 11 protein_id gb|AEB84451.1||gnl|jgi|Alide2_2078 note PFAM: Glutaminase~TIGRFAM: Glutaminase~HAMAP: Glutaminase~KEGG: atu:Atu1859 glutaminase inference protein motif:HAMAP:MF_00313 db_xref InterPro:IPR015868 2170469 2169282 gene locus_tag Alide2_2079 2170469 2169282 CDS product amidohydrolase EC_number 3.5.1.32 transl_table 11 protein_id gb|AEB84452.1||gnl|jgi|Alide2_2079 note TIGRFAM: Peptidase M20D, amidohydrolase~KEGG: pol:Bpro_4523 peptidase M20D, amidohydrolase~PFAM: Peptidase M20; Peptidase M20, dimerisation inference protein motif:TFAM:TIGR01891 db_xref GO:0016787 db_xref InterPro:IPR002933 db_xref InterPro:IPR010168 db_xref InterPro:IPR011650 2171847 2170507 gene locus_tag Alide2_2080 2171847 2170507 CDS product General substrate transporter transl_table 11 protein_id gb|AEB84453.1||gnl|jgi|Alide2_2080 note PFAM: General substrate transporter~KEGG: rme:Rmet_5758 major facilitator protein family permease inference protein motif:PFAM:PF00083 db_xref GO:0005215 db_xref InterPro:IPR005828 2171974 2172876 gene locus_tag Alide2_2081 2171974 2172876 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB84454.1||gnl|jgi|Alide2_2081 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: pol:Bpro_4525 LysR family transcriptional regulator inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 2173742 2172945 gene locus_tag Alide2_2082 2173742 2172945 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84455.1||gnl|jgi|Alide2_2082 note KEGG: sde:Sde_2785 hypothetical protein inference similar to AA sequence:KEGG:Sde_2785 2174371 2173877 gene locus_tag Alide2_2083 2174371 2173877 CDS product acetyltransferase, GNAT family transl_table 11 protein_id gb|AEB84456.1||gnl|jgi|Alide2_2083 note manually curated~KEGG: afr:AFE_1417 acetyltransferase, GNAT family inference similar to AA sequence:KEGG:AFE_1417 2174634 2174368 gene locus_tag Alide2_2084 2174634 2174368 CDS product protein of unknown function DUF1778 transl_table 11 protein_id gb|AEB84457.1||gnl|jgi|Alide2_2084 note PFAM: Protein of unknown function DUF1778~KEGG: afr:AFE_1418 hypothetical protein inference protein motif:PFAM:PF08681 db_xref InterPro:IPR014795 2176121 2174865 gene locus_tag Alide2_2085 2176121 2174865 CDS product major facilitator superfamily MFS_1 transl_table 11 protein_id gb|AEB84458.1||gnl|jgi|Alide2_2085 note PFAM: Major facilitator superfamily MFS-1~KEGG: ajs:Ajs_1692 major facilitator superfamily transporter inference protein motif:PFAM:PF07690 db_xref InterPro:IPR011701 2176305 2177096 gene locus_tag Alide2_2086 2176305 2177096 CDS product 3-oxoacyl-(acyl-carrier-protein) reductase EC_number 1.1.1.100 transl_table 11 protein_id gb|AEB84459.1||gnl|jgi|Alide2_2086 note KEGG: dia:Dtpsy_2008 gluconate 5-dehydrogenase~PFAM: Short-chain dehydrogenase/reductase SDR inference protein motif:PRIAM:1.1.1.100 db_xref InterPro:IPR002198 2177160 2177585 gene locus_tag Alide2_2087 2177160 2177585 CDS product phenylacetic acid degradation-related protein transl_table 11 protein_id gb|AEB84460.1||gnl|jgi|Alide2_2087 note KEGG: ajs:Ajs_1696 hypothetical protein~TIGRFAM: Phenylacetic acid degradation-related protein~PFAM: Thioesterase superfamily inference protein motif:TFAM:TIGR00369 db_xref InterPro:IPR003736 db_xref InterPro:IPR006683 2177679 2178695 gene locus_tag Alide2_2088 2177679 2178695 CDS product 2-alkenal reductase EC_number 1.3.1.74 transl_table 11 protein_id gb|AEB84461.1||gnl|jgi|Alide2_2088 note PFAM: Alcohol dehydrogenase, C-terminal~KEGG: ajs:Ajs_1697 alcohol dehydrogenase~SMART: Polyketide synthase, enoylreductase inference protein motif:PRIAM:1.3.1.74 db_xref InterPro:IPR013149 db_xref InterPro:IPR020843 2178772 2179695 gene locus_tag Alide2_2089 2178772 2179695 CDS product putative glutathione S-transferase-related protein transl_table 11 protein_id gb|AEB84462.1||gnl|jgi|Alide2_2089 note KEGG: ajs:Ajs_1699 putative glutathione S-transferase-related protein inference similar to AA sequence:KEGG:Ajs_1699 2180368 2179775 gene locus_tag Alide2_2090 2180368 2179775 CDS product protein of unknown function DUF1566 transl_table 11 protein_id gb|AEB84463.1||gnl|jgi|Alide2_2090 note PFAM: Protein of unknown function DUF1566~KEGG: dia:Dtpsy_2002 protein of unknown function DUF1566 inference protein motif:PFAM:PF07603 db_xref InterPro:IPR011460 2180857 2182260 gene locus_tag Alide2_2091 2180857 2182260 CDS product major facilitator superfamily MFS_1 transl_table 11 protein_id gb|AEB84464.1||gnl|jgi|Alide2_2091 note PFAM: Major facilitator superfamily MFS-1~KEGG: ajs:Ajs_1703 major facilitator superfamily transporter inference protein motif:PFAM:PF07690 db_xref InterPro:IPR011701 2182260 2183735 gene locus_tag Alide2_2092 2182260 2183735 CDS product Deoxyribodipyrimidine photo-lyase EC_number 4.1.99.3 transl_table 11 protein_id gb|AEB84465.1||gnl|jgi|Alide2_2092 note KEGG: ajs:Ajs_1801 deoxyribodipyrimidine photo-lyase type I~PFAM: DNA photolyase, FAD-binding/Cryptochrome, C-terminal; DNA photolyase, N-terminal inference protein motif:PRIAM:4.1.99.3 db_xref InterPro:IPR005101 db_xref InterPro:IPR006050 2184300 2183740 gene locus_tag Alide2_2093 2184300 2183740 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84466.1||gnl|jgi|Alide2_2093 note KEGG: ajs:Ajs_1629 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1629 2186641 2184281 gene locus_tag Alide2_2094 2186641 2184281 CDS product 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase EC_number 2.1.1.14 transl_table 11 protein_id gb|AEB84467.1||gnl|jgi|Alide2_2094 note PFAM: Methionine synthase, vitamin-B12 independent; Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal~TIGRFAM: Cobalamin-independent methionine synthase~HAMAP: Cobalamin-independent methionine synthase~KEGG: ajs:Ajs_1630 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase inference protein motif:HAMAP:MF_00172 db_xref InterPro:IPR002629 db_xref InterPro:IPR006276 db_xref InterPro:IPR013215 2186750 2187676 gene locus_tag Alide2_2095 2186750 2187676 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB84468.1||gnl|jgi|Alide2_2095 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: ajs:Ajs_1631 LysR family transcriptional regulator inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 2187792 2187959 gene locus_tag Alide2_2096 2187792 2187959 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84469.1||gnl|jgi|Alide2_2096 inference ab initio prediction:Prodigal:1.4 2187975 2189645 gene locus_tag Alide2_2097 pseudo 2189638 2189964 gene locus_tag Alide2_2098 2189638 2189964 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84470.1||gnl|jgi|Alide2_2098 note KEGG: dac:Daci_3076 hypothetical protein inference similar to AA sequence:KEGG:Daci_3076 2190504 2189983 gene locus_tag Alide2_2099 2190504 2189983 CDS product Protein of unknown function DUF3016 transl_table 11 protein_id gb|AEB84471.1||gnl|jgi|Alide2_2099 note PFAM: Protein of unknown function DUF3016~KEGG: dac:Daci_0667 hypothetical protein inference protein motif:PFAM:PF11454 db_xref InterPro:IPR021557 2191471 2190611 gene locus_tag Alide2_2100 2191471 2190611 CDS product Methylisocitrate lyase EC_number 4.1.3.30 transl_table 11 protein_id gb|AEB84472.1||gnl|jgi|Alide2_2100 note KEGG: dac:Daci_3579 PEP phosphonomutase~PFAM: Isocitrate lyase/phosphorylmutase inference protein motif:PRIAM:4.1.3.30 db_xref InterPro:IPR000918 2192796 2191633 gene locus_tag Alide2_2101 2192796 2191633 CDS product AcnD-accessory protein PrpF transl_table 11 protein_id gb|AEB84473.1||gnl|jgi|Alide2_2101 note KEGG: dac:Daci_3586 AcnD-accessory protein PrpF~TIGRFAM: PrpF, AcnD-accessory~PFAM: PrpF protein inference protein motif:TFAM:TIGR02334 db_xref InterPro:IPR007400 db_xref InterPro:IPR012709 2195427 2192824 gene locus_tag Alide2_2102 2195427 2192824 CDS product 2-methylisocitrate dehydratase, Fe/S-dependent EC_number 4.2.1.3 transl_table 11 protein_id gb|AEB84474.1||gnl|jgi|Alide2_2102 note TIGRFAM: 2-methylisocitrate dehydratase AcnD, Fe/S-dependent~KEGG: dia:Dtpsy_2080 aconitate hydratase~PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; Aconitase A/isopropylmalate dehydratase small subunit, swivel inference protein motif:TFAM:TIGR02333 db_xref InterPro:IPR000573 db_xref InterPro:IPR001030 db_xref InterPro:IPR012708 2196607 2195447 gene locus_tag Alide2_2103 2196607 2195447 CDS product 2-methylcitrate synthase/citrate synthase II EC_number 2.3.3.5 transl_table 11 protein_id gb|AEB84475.1||gnl|jgi|Alide2_2103 note TIGRFAM: 2-methylcitrate synthase/citrate synthase type I~KEGG: ajs:Ajs_1635 methylcitrate synthase~PFAM: Citrate synthase-like inference protein motif:TFAM:TIGR01800 db_xref GO:0003824 db_xref InterPro:IPR002020 db_xref InterPro:IPR011278 2196999 2196604 gene locus_tag Alide2_2104 2196999 2196604 CDS product thioesterase superfamily protein transl_table 11 protein_id gb|AEB84476.1||gnl|jgi|Alide2_2104 note KEGG: dia:Dtpsy_2078 thioesterase superfamily protein~manually curated~PFAM: Thioesterase superfamily inference protein motif:PFAM:PF03061 db_xref InterPro:IPR006683 2197102 2198562 gene locus_tag Alide2_2105 2197102 2198562 CDS product transcriptional regulator, XRE family transl_table 11 protein_id gb|AEB84477.1||gnl|jgi|Alide2_2105 note KEGG: ajs:Ajs_1637 XRE family transcriptional regulator~PFAM: Protein of unknown function DUF2083,transcriptional regulator; Helix-turn-helix type 3; Protein of unknown function DUF955~SMART: Helix-turn-helix type 3 inference protein motif:PFAM:PF09856 db_xref GO:0043565 db_xref InterPro:IPR001387 db_xref InterPro:IPR010359 db_xref InterPro:IPR018653 2199582 2198674 gene locus_tag Alide2_2106 2199582 2198674 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB84478.1||gnl|jgi|Alide2_2106 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: cti:RALTA_B2225 putative transcription regulator, LysR family inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 2199712 2200095 gene locus_tag Alide2_2107 2199712 2200095 CDS product Glyoxalase/bleomycin resistance protein/dioxygenase transl_table 11 protein_id gb|AEB84479.1||gnl|jgi|Alide2_2107 note PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase~KEGG: cti:RALTA_B2224 putative metallothiol transferase inference protein motif:PFAM:PF00903 db_xref InterPro:IPR004360 2200145 2201212 gene locus_tag Alide2_2108 2200145 2201212 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84480.1||gnl|jgi|Alide2_2108 note KEGG: hse:Hsero_2301 hypothetical protein inference similar to AA sequence:KEGG:Hsero_2301 2201665 2201219 gene locus_tag Alide2_2109 2201665 2201219 CDS product RNA-binding S4 domain protein transl_table 11 protein_id gb|AEB84481.1||gnl|jgi|Alide2_2109 note KEGG: ajs:Ajs_1639 RNA-binding S4 domain-containing protein~PFAM: RNA-binding S4~SMART: RNA-binding S4 inference protein motif:PFAM:PF01479 db_xref GO:0003723 db_xref InterPro:IPR002942 2203091 2201688 gene locus_tag Alide2_2110 2203091 2201688 CDS product integral membrane sensor signal transduction histidine kinase transl_table 11 protein_id gb|AEB84482.1||gnl|jgi|Alide2_2110 note KEGG: dia:Dtpsy_2074 histidine kinase~PFAM: Two-component sensor kinase N-terminal; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; ATPase-like, ATP-binding domain~SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain inference protein motif:PFAM:PF08521 db_xref GO:0000155 db_xref GO:0004871 db_xref GO:0005524 db_xref InterPro:IPR003594 db_xref InterPro:IPR003660 db_xref InterPro:IPR003661 db_xref InterPro:IPR013727 2203771 2203088 gene locus_tag Alide2_2111 2203771 2203088 CDS product two component transcriptional regulator, winged helix family transl_table 11 protein_id gb|AEB84483.1||gnl|jgi|Alide2_2111 note KEGG: ajs:Ajs_1641 two component transcriptional regulator~PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal~SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal inference protein motif:PFAM:PF00072 db_xref GO:0000156 db_xref GO:0003677 db_xref InterPro:IPR001789 db_xref InterPro:IPR001867 2203914 2204873 gene locus_tag Alide2_2112 2203914 2204873 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84484.1||gnl|jgi|Alide2_2112 note KEGG: dia:Dtpsy_2072 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_2072 db_xref InterPro:IPR005064 2205010 2205564 gene locus_tag Alide2_2113 2205010 2205564 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84485.1||gnl|jgi|Alide2_2113 note KEGG: dia:Dtpsy_2071 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_2071 2205564 2207093 gene locus_tag Alide2_2114 2205564 2207093 CDS product protein of unknown function DUF112 transmembrane transl_table 11 protein_id gb|AEB84486.1||gnl|jgi|Alide2_2114 note PFAM: Protein of unknown function DUF112, transmembrane~KEGG: ajs:Ajs_1644 hypothetical protein inference protein motif:PFAM:PF01970 db_xref InterPro:IPR002823 2207159 2209348 gene locus_tag Alide2_2115 2207159 2209348 CDS product Hydroxybutyrate-dimer hydrolase EC_number 3.1.1.22 transl_table 11 protein_id gb|AEB84487.1||gnl|jgi|Alide2_2115 note KEGG: dia:Dtpsy_2060 putative D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane~PFAM: D-(-)-3-hydroxybutyrate oligomer hydrolase, putative inference protein motif:PRIAM:3.1.1.22 db_xref InterPro:IPR016582 2210253 2209666 gene locus_tag Alide2_2116 2210253 2209666 CDS product putative lipoprotein transl_table 11 protein_id gb|AEB84488.1||gnl|jgi|Alide2_2116 note KEGG: ctt:CtCNB1_3704 putative lipoprotein inference similar to AA sequence:KEGG:CtCNB1_3704 db_xref InterPro:IPR007461 2210605 2210438 gene locus_tag Alide2_2117 2210605 2210438 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84489.1||gnl|jgi|Alide2_2117 note KEGG: dia:Dtpsy_2056 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_2056 2211716 2210619 gene locus_tag Alide2_2118 2211716 2210619 CDS product protein of unknown function DUF395 YeeE/YedE transl_table 11 protein_id gb|AEB84490.1||gnl|jgi|Alide2_2118 note PFAM: Domain of unknown function DUF395, YeeE/YedE~KEGG: ajs:Ajs_1649 protein of unknown function DUF395, YeeE/YedE inference protein motif:PFAM:PF04143 db_xref InterPro:IPR007272 2212755 2211811 gene locus_tag Alide2_2119 2212755 2211811 CDS product Rhodanese-like protein transl_table 11 protein_id gb|AEB84491.1||gnl|jgi|Alide2_2119 note KEGG: dia:Dtpsy_2054 rhodanese domain protein~PFAM: Rhodanese-like~SMART: Rhodanese-like inference protein motif:PFAM:PF00581 db_xref InterPro:IPR001763 2213865 2212870 gene locus_tag Alide2_2120 2213865 2212870 CDS product ferrochelatase EC_number 4.99.1.1 transl_table 11 protein_id gb|AEB84492.1||gnl|jgi|Alide2_2120 note TIGRFAM: Ferrochelatase~KEGG: ajs:Ajs_1652 ferrochelatase~PFAM: Ferrochelatase inference protein motif:TFAM:TIGR00109 db_xref GO:0004325 db_xref InterPro:IPR001015 2213884 2214609 gene locus_tag Alide2_2121 2213884 2214609 CDS product HAD-superfamily hydrolase, subfamily IA, variant 3 transl_table 11 protein_id gb|AEB84493.1||gnl|jgi|Alide2_2121 note KEGG: dac:Daci_2563 HAD family hydrolase~TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1~PFAM: Haloacid dehalogenase-like hydrolase inference protein motif:TFAM:TIGR01509 db_xref GO:0008967 db_xref GO:0016787 db_xref InterPro:IPR005834 db_xref InterPro:IPR006402 db_xref InterPro:IPR006439 2217337 2214581 gene locus_tag Alide2_2122 2217337 2214581 CDS product ATPase, P-type (transporting), HAD superfamily, subfamily IC EC_number 3.6.3.8 transl_table 11 protein_id gb|AEB84494.1||gnl|jgi|Alide2_2122 note SMART: ATPase, P-type cation-transporter, N-terminal~TIGRFAM: ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter~KEGG: dia:Dtpsy_2050 ATPase, P-type (transporting), HAD superfamily, subfamily IC~PFAM: ATPase, P-type, ATPase-associated domain; ATPase, P-type cation-transporter, N-terminal; Haloacid dehalogenase-like hydrolase; ATPase, P-type cation-transporter, C-terminal inference protein motif:TFAM:TIGR01494 db_xref GO:0005524 db_xref InterPro:IPR001757 db_xref InterPro:IPR004014 db_xref InterPro:IPR005834 db_xref InterPro:IPR006068 db_xref InterPro:IPR008250 2218322 2217516 gene locus_tag Alide2_2123 2218322 2217516 CDS product alpha/beta hydrolase fold protein transl_table 11 protein_id gb|AEB84495.1||gnl|jgi|Alide2_2123 note PFAM: Alpha/beta hydrolase fold-1~KEGG: ajs:Ajs_1655 alpha/beta hydrolase fold inference protein motif:PFAM:PF00561 db_xref InterPro:IPR000073 2219623 2218322 gene locus_tag Alide2_2124 2219623 2218322 CDS product O-acetylhomoserine/O-acetylserine sulfhydrylase EC_number 2.5.1.47 transl_table 11 protein_id gb|AEB84496.1||gnl|jgi|Alide2_2124 note TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase~KEGG: ajs:Ajs_1656 O-acetylhomoserine aminocarboxypropyltransferase~PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme inference protein motif:TFAM:TIGR01326 db_xref GO:0003824 db_xref InterPro:IPR000277 db_xref InterPro:IPR006235 2219739 2220194 gene locus_tag Alide2_2125 2219739 2220194 CDS product CBS domain containing protein transl_table 11 protein_id gb|AEB84497.1||gnl|jgi|Alide2_2125 note KEGG: dia:Dtpsy_2047 CBS domain containing protein~PFAM: Cystathionine beta-synthase, core~SMART: Cystathionine beta-synthase, core inference protein motif:PFAM:PF00571 db_xref InterPro:IPR000644 2220288 2221382 gene locus_tag Alide2_2126 2220288 2221382 CDS product chorismate synthase EC_number 4.2.3.5 transl_table 11 protein_id gb|AEB84498.1||gnl|jgi|Alide2_2126 note TIGRFAM: Chorismate synthase~KEGG: dia:Dtpsy_2046 chorismate synthase~PFAM: Chorismate synthase inference protein motif:TFAM:TIGR00033 db_xref GO:0004107 db_xref InterPro:IPR000453 2221893 2221444 gene locus_tag Alide2_2127 2221893 2221444 CDS product Ribonucleotide reductase regulator NrdR-like protein transl_table 11 protein_id gb|AEB84499.1||gnl|jgi|Alide2_2127 note KEGG: dia:Dtpsy_2045 transcriptional regulator NrdR~TIGRFAM: Ribonucleotide reductase regulator NrdR-like~PFAM: ATP-cone inference protein motif:TFAM:TIGR00244 db_xref GO:0008270 db_xref GO:0016564 db_xref InterPro:IPR003796 db_xref InterPro:IPR005144 2223163 2221919 gene locus_tag Alide2_2128 2223163 2221919 CDS product Glycine hydroxymethyltransferase EC_number 2.1.2.1 transl_table 11 protein_id gb|AEB84500.1||gnl|jgi|Alide2_2128 note KEGG: dia:Dtpsy_2044 serine hydroxymethyltransferase~PFAM: Serine hydroxymethyltransferase inference protein motif:PRIAM:2.1.2.1 db_xref InterPro:IPR001085 2224217 2223405 gene locus_tag Alide2_2129 2224217 2223405 CDS product Lytic transglycosylase catalytic transl_table 11 protein_id gb|AEB84501.1||gnl|jgi|Alide2_2129 note PFAM: Lytic transglycosylase-like, catalytic~KEGG: dia:Dtpsy_2043 lytic transglycosylase catalytic inference protein motif:PFAM:PF01464 db_xref InterPro:IPR008258 2224935 2228693 gene locus_tag Alide2_2130 2224935 2228693 CDS product protein of unknown function DUF748 transl_table 11 protein_id gb|AEB84502.1||gnl|jgi|Alide2_2130 note PFAM: Protein of unknown function DUF748; Outer membrane protein, OmpA/MotB, C-terminal~KEGG: ajs:Ajs_1662 hypothetical protein inference protein motif:PFAM:PF05359 db_xref InterPro:IPR006665 db_xref InterPro:IPR008023 2228917 2231514 gene locus_tag Alide2_2131 2228917 2231514 CDS product protein of unknown function DUF349 transl_table 11 protein_id gb|AEB84503.1||gnl|jgi|Alide2_2131 note PFAM: Protein of unknown function DUF349~KEGG: dia:Dtpsy_2041 hypothetical protein inference protein motif:PFAM:PF03993 db_xref InterPro:IPR007139 2231711 2231627 gene locus_tag Alide2_R0029 note tRNA-Leu4 2231711 2231627 tRNA product tRNA-Leu 2231972 2231888 gene locus_tag Alide2_R0030 note tRNA-Leu3 2231972 2231888 tRNA product tRNA-Leu 2231992 2234283 gene locus_tag Alide2_2132 2231992 2234283 CDS product ribonuclease R transl_table 11 protein_id gb|AEB84504.1||gnl|jgi|Alide2_2132 note SMART: Ribonuclease II/R; Cold shock protein; RNA-binding domain, S1~manually curated~KEGG: dia:Dtpsy_1240 ribonuclease R~TIGRFAM: Ribonuclease R, bacterial; Ribonuclease II/ribonuclease R, bacteria~PFAM: Ribonuclease II/R; Ribonuclease B, N-terminal OB domain; Ribosomal protein S1, RNA-binding domain inference protein motif:TFAM:TIGR02063 db_xref GO:0003723 db_xref GO:0004518 db_xref GO:0004540 db_xref InterPro:IPR001900 db_xref InterPro:IPR003029 db_xref InterPro:IPR004476 db_xref InterPro:IPR011129 db_xref InterPro:IPR011805 db_xref InterPro:IPR013223 db_xref InterPro:IPR022967 2234306 2235061 gene locus_tag Alide2_2133 2234306 2235061 CDS product short-chain dehydrogenase/reductase SDR transl_table 11 protein_id gb|AEB84505.1||gnl|jgi|Alide2_2133 note PFAM: Short-chain dehydrogenase/reductase SDR~KEGG: dia:Dtpsy_1241 short-chain dehydrogenase/reductase SDR inference protein motif:PFAM:PF00106 db_xref GO:0016491 db_xref InterPro:IPR002198 2235152 2235802 gene locus_tag Alide2_2134 2235152 2235802 CDS product cytochrome c553-like protein transl_table 11 protein_id gb|AEB84506.1||gnl|jgi|Alide2_2134 note KEGG: aav:Aave_3388 cytochrome c553-like protein inference similar to AA sequence:KEGG:Aave_3388 2235799 2237088 gene locus_tag Alide2_2135 2235799 2237088 CDS product Gluconate 2-dehydrogenase (acceptor) EC_number 1.1.99.3 transl_table 11 protein_id gb|AEB84507.1||gnl|jgi|Alide2_2135 note KEGG: aav:Aave_3387 cytochrome c, class I~PFAM: Cytochrome c, class I inference protein motif:PRIAM:1.1.99.3 db_xref InterPro:IPR003088 2237109 2237492 gene locus_tag Alide2_2136 2237109 2237492 CDS product Thioredoxin domain-containing protein transl_table 11 protein_id gb|AEB84508.1||gnl|jgi|Alide2_2136 note PFAM: Thioredoxin domain~KEGG: dia:Dtpsy_1244 hypothetical protein inference protein motif:PFAM:PF00085 db_xref InterPro:IPR013766 2237693 2238283 gene locus_tag Alide2_2137 2237693 2238283 CDS product Ribosome maturation factor rimP transl_table 11 protein_id gb|AEB84509.1||gnl|jgi|Alide2_2137 note KEGG: dia:Dtpsy_1245 hypothetical protein~HAMAP: Ribosome maturation factor RimP~PFAM: Ribosome maturation factor RimP inference protein motif:HAMAP:MF_01077 db_xref InterPro:IPR003728 2238352 2239836 gene locus_tag Alide2_2138 2238352 2239836 CDS product NusA antitermination factor transl_table 11 protein_id gb|AEB84510.1||gnl|jgi|Alide2_2138 note TIGRFAM: Transcription termination factor NusA; Transcription termination factor NusA, C-terminal duplication~PFAM: Transcription factor NusA, N-terminal; Ribosomal protein S1, RNA-binding domain~KEGG: dia:Dtpsy_1246 NusA antitermination factor~SMART: RNA-binding domain, S1; K Homology inference protein motif:TFAM:TIGR01953 db_xref GO:0003723 db_xref GO:0030528 db_xref InterPro:IPR003029 db_xref InterPro:IPR004087 db_xref InterPro:IPR010213 db_xref InterPro:IPR010214 db_xref InterPro:IPR013735 db_xref InterPro:IPR022967 2239861 2242692 gene locus_tag Alide2_2139 2239861 2242692 CDS product translation initiation factor IF-2 transl_table 11 protein_id gb|AEB84511.1||gnl|jgi|Alide2_2139 note KEGG: dia:Dtpsy_1247 translation initiation factor IF-2~TIGRFAM: Translation initiation factor aIF-2, bacterial-like; Small GTP-binding protein~PFAM: Protein synthesis factor, GTP-binding; Initiation factor 2 associated region, bacterial; Translation initiation factor IF-2, N-terminal; Translation elongation factor EFTu/EF1A, domain 2; Translation initiation factor IF- 2, domain 3 inference protein motif:TFAM:TIGR00487 db_xref GO:0003743 db_xref GO:0005525 db_xref InterPro:IPR000178 db_xref InterPro:IPR000795 db_xref InterPro:IPR004161 db_xref InterPro:IPR005225 db_xref InterPro:IPR006847 db_xref InterPro:IPR013575 db_xref InterPro:IPR023115 2242696 2243076 gene locus_tag Alide2_2140 2242696 2243076 CDS product ribosome-binding factor A transl_table 11 protein_id gb|AEB84512.1||gnl|jgi|Alide2_2140 note KEGG: aav:Aave_3382 ribosome-binding factor A~TIGRFAM: Ribosome-binding factor A~PFAM: Ribosome-binding factor A inference protein motif:TFAM:TIGR00082 db_xref InterPro:IPR000238 2243069 2244073 gene locus_tag Alide2_2141 2243069 2244073 CDS product tRNA pseudouridine synthase B transl_table 11 protein_id gb|AEB84513.1||gnl|jgi|Alide2_2141 note TIGRFAM: tRNA pseudouridine synthase II, TruB~HAMAP: tRNA pseudouridine synthase II, TruB~KEGG: ajs:Ajs_2559 tRNA pseudouridine synthase B~PFAM: Pseudouridine synthase II inference protein motif:HAMAP:MF_01080 db_xref InterPro:IPR002501 db_xref InterPro:IPR014780 2244070 2245899 gene locus_tag Alide2_2142 2244070 2245899 CDS product GTP-binding protein TypA transl_table 11 protein_id gb|AEB84514.1||gnl|jgi|Alide2_2142 note KEGG: ajs:Ajs_2558 GTP-binding protein TypA~TIGRFAM: GTP-binding protein TypA; Small GTP-binding protein~PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal inference protein motif:TFAM:TIGR01394 db_xref GO:0005525 db_xref InterPro:IPR000640 db_xref InterPro:IPR000795 db_xref InterPro:IPR004161 db_xref InterPro:IPR005225 db_xref InterPro:IPR006298 2246845 2245967 gene locus_tag Alide2_2143 2246845 2245967 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84515.1||gnl|jgi|Alide2_2143 note KEGG: vap:Vapar_3272 hypothetical protein inference similar to AA sequence:KEGG:Vapar_3272 2247179 2248270 gene locus_tag Alide2_2144 2247179 2248270 CDS product 3-hydroxyisobutyryl-CoA hydrolase EC_number 3.1.2.4 transl_table 11 protein_id gb|AEB84516.1||gnl|jgi|Alide2_2144 note KEGG: ajs:Ajs_2556 3-hydroxyisobutyryl-CoA hydrolase~PFAM: Crotonase, core inference protein motif:PRIAM:3.1.2.4 db_xref InterPro:IPR001753 2249063 2248221 gene locus_tag Alide2_2145 2249063 2248221 CDS product putative transmembrane anti-sigma factor transl_table 11 protein_id gb|AEB84517.1||gnl|jgi|Alide2_2145 note KEGG: ajs:Ajs_2555 putative transmembrane anti-sigma factor inference similar to AA sequence:KEGG:Ajs_2555 2249612 2249088 gene locus_tag Alide2_2146 2249612 2249088 CDS product RNA polymerase, sigma-24 subunit, ECF subfamily transl_table 11 protein_id gb|AEB84518.1||gnl|jgi|Alide2_2146 note KEGG: dia:Dtpsy_1254 RNA polymerase, sigma-24 subunit, ECF subfamily~TIGRFAM: RNA polymerase sigma-70~PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2 inference protein motif:TFAM:TIGR02937 db_xref GO:0003677 db_xref GO:0003700 db_xref GO:0016987 db_xref InterPro:IPR007627 db_xref InterPro:IPR013249 db_xref InterPro:IPR014284 2249994 2249629 gene locus_tag Alide2_2147 2249994 2249629 CDS product secreted repeat of unknown function transl_table 11 protein_id gb|AEB84519.1||gnl|jgi|Alide2_2147 note KEGG: dia:Dtpsy_1255 secreted repeat of unknown function inference similar to AA sequence:KEGG:Dtpsy_1255 db_xref InterPro:IPR005297 2250567 2250094 gene locus_tag Alide2_2148 2250567 2250094 CDS product SsrA-binding protein transl_table 11 protein_id gb|AEB84520.1||gnl|jgi|Alide2_2148 note KEGG: dia:Dtpsy_1256 SsrA-binding protein~TIGRFAM: SsrA-binding protein~PFAM: SsrA-binding protein inference protein motif:TFAM:TIGR00086 db_xref GO:0003723 db_xref InterPro:IPR000037 2250714 2251154 gene locus_tag Alide2_2149 2250714 2251154 CDS product cyclase/dehydrase transl_table 11 protein_id gb|AEB84521.1||gnl|jgi|Alide2_2149 note PFAM: Streptomyces cyclase/dehydrase~KEGG: dia:Dtpsy_1257 cyclase/dehydrase inference protein motif:PFAM:PF03364 db_xref InterPro:IPR005031 2251164 2251490 gene locus_tag Alide2_2150 2251164 2251490 CDS product protein of unknown function UPF0125 transl_table 11 protein_id gb|AEB84522.1||gnl|jgi|Alide2_2150 note PFAM: Uncharacterised protein family UPF0125~KEGG: ajs:Ajs_2550 hypothetical protein inference protein motif:PFAM:PF03658 db_xref InterPro:IPR005346 2252002 2251499 gene locus_tag Alide2_2151 2252002 2251499 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84523.1||gnl|jgi|Alide2_2151 note KEGG: ajs:Ajs_2549 hypothetical protein inference similar to AA sequence:KEGG:Ajs_2549 2252096 2253571 gene locus_tag Alide2_2152 2252096 2253571 CDS product inosine-5'-monophosphate dehydrogenase EC_number 1.1.1.205 transl_table 11 protein_id gb|AEB84524.1||gnl|jgi|Alide2_2152 note SMART: Cystathionine beta-synthase, core~TIGRFAM: IMP dehydrogenase~KEGG: dia:Dtpsy_1260 inosine-5'-monophosphate dehydrogenase~PFAM: IMP dehydrogenase/GMP reductase; Cystathionine beta-synthase, core inference protein motif:TFAM:TIGR01302 db_xref GO:0003938 db_xref InterPro:IPR000644 db_xref InterPro:IPR001093 db_xref InterPro:IPR005990 2253645 2255261 gene locus_tag Alide2_2153 2253645 2255261 CDS product GMP synthase, large subunit EC_number 6.3.5.2 transl_table 11 protein_id gb|AEB84525.1||gnl|jgi|Alide2_2153 note TIGRFAM: GMP synthase, C-terminal; GMP synthase, N-terminal~KEGG: dac:Daci_3013 GMP synthase~PFAM: GMP synthase, C-terminal; Glutamine amidotransferase class-I, C-terminal; NAD/GMP synthase inference protein motif:TFAM:TIGR00884 db_xref GO:0003922 db_xref GO:0005524 db_xref InterPro:IPR000991 db_xref InterPro:IPR001674 db_xref InterPro:IPR004739 db_xref InterPro:IPR022310 2255650 2257176 gene locus_tag Alide2_2154 2255650 2257176 CDS product Integrase catalytic region transl_table 11 protein_id gb|AEB84526.1||gnl|jgi|Alide2_2154 note PFAM: Integrase, catalytic core~KEGG: axy:AXYL_06593 integrase family protein 10 inference protein motif:PFAM:PF00665 db_xref GO:0003677 db_xref InterPro:IPR001584 2257166 2257969 gene locus_tag Alide2_2155 2257166 2257969 CDS product IstB domain protein ATP-binding protein transl_table 11 protein_id gb|AEB84527.1||gnl|jgi|Alide2_2155 note KEGG: axy:AXYL_06594 IstB-like ATP binding family protein 3~PFAM: IstB-like ATP-binding protein~SMART: ATPase, AAA+ type, core inference protein motif:PFAM:PF01695 db_xref GO:0005524 db_xref InterPro:IPR002611 db_xref InterPro:IPR003593 2258808 2258020 gene locus_tag Alide2_2156 2258808 2258020 CDS product integrase family protein transl_table 11 protein_id gb|AEB84528.1||gnl|jgi|Alide2_2156 note PFAM: Integrase, catalytic core, phage~KEGG: bpt:Bpet1499 putative integrase/recombinase inference protein motif:PFAM:PF00589 db_xref GO:0003677 db_xref InterPro:IPR002104 2260064 2258805 gene locus_tag Alide2_2157 2260064 2258805 CDS product integrase family protein transl_table 11 protein_id gb|AEB84529.1||gnl|jgi|Alide2_2157 note PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage~KEGG: bpt:Bpet1498 putative integrase/recombinase inference protein motif:PFAM:PF00589 db_xref GO:0003677 db_xref InterPro:IPR002104 db_xref InterPro:IPR004107 2260204 2260365 gene locus_tag Alide2_2158 pseudo 2260648 2260998 gene locus_tag Alide2_2159 2260648 2260998 CDS product putative transposon protein transl_table 11 protein_id gb|AEB84530.1||gnl|jgi|Alide2_2159 note KEGG: bpt:Bpet2173 putative transposon inference similar to AA sequence:KEGG:Bpet2173 2261747 2262577 gene locus_tag Alide2_2160 2261747 2262577 CDS product protein of unknown function DUF932 transl_table 11 protein_id gb|AEB84531.1||gnl|jgi|Alide2_2160 note PFAM: Protein of unknown function DUF932~KEGG: sml:Smlt1327 hypothetical protein inference protein motif:PFAM:PF06067 db_xref InterPro:IPR009276 2262658 2264724 gene locus_tag Alide2_2161 2262658 2264724 CDS product ParB domain protein nuclease transl_table 11 protein_id gb|AEB84532.1||gnl|jgi|Alide2_2161 note KEGG: dia:Dtpsy_3534 ParB domain protein nuclease~PFAM: ParB-like nuclease~SMART: ParB-like nuclease inference protein motif:PFAM:PF02195 db_xref GO:0003677 db_xref InterPro:IPR003115 2264787 2264996 gene locus_tag Alide2_2162 2264787 2264996 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84533.1||gnl|jgi|Alide2_2162 note KEGG: dac:Daci_2732 hypothetical protein inference similar to AA sequence:KEGG:Daci_2732 2265428 2265201 gene locus_tag Alide2_2163 2265428 2265201 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84534.1||gnl|jgi|Alide2_2163 note KEGG: rfr:Rfer_0855 hypothetical protein inference similar to AA sequence:KEGG:Rfer_0855 2265703 2265425 gene locus_tag Alide2_2164 2265703 2265425 CDS product mercuric transport protein periplasmic component transl_table 11 protein_id gb|AEB84535.1||gnl|jgi|Alide2_2164 note KEGG: psa:PST_3433 periplasmic transport protein; MerP~TIGRFAM: Mercuric transport protein periplasmic component~PFAM: Heavy metal transport/detoxification protein inference protein motif:TFAM:TIGR02052 db_xref GO:0015097 db_xref GO:0045340 db_xref InterPro:IPR006121 db_xref InterPro:IPR011795 2266061 2265714 gene locus_tag Alide2_2165 2266061 2265714 CDS product Mercuric transport protein MerT transl_table 11 protein_id gb|AEB84536.1||gnl|jgi|Alide2_2165 note PFAM: Mercuric transport protein MerT~KEGG: psa:PST_3432 mercuric transport protein inference protein motif:PFAM:PF02411 db_xref GO:0015097 db_xref InterPro:IPR003457 2266135 2266530 gene locus_tag Alide2_2166 2266135 2266530 CDS product transcriptional regulator, MerR family transl_table 11 protein_id gb|AEB84537.1||gnl|jgi|Alide2_2166 note TIGRFAM: Hg(II)-responsive transcriptional regulator~PFAM: Transcription regulator MerR, DNA binding; HTH transcriptional regulator, MerR~KEGG: rme:Rmet_5990 mercury resistance regulatory protein MerR~SMART: HTH transcriptional regulator, MerR inference protein motif:TFAM:TIGR02051 db_xref GO:0003677 db_xref GO:0045340 db_xref InterPro:IPR000551 db_xref InterPro:IPR011794 db_xref InterPro:IPR015358 2267841 2266792 gene locus_tag Alide2_2167 2267841 2266792 CDS product protein of unknown function DUF6 transmembrane transl_table 11 protein_id gb|AEB84538.1||gnl|jgi|Alide2_2167 note PFAM: Drug/metabolite transporter~KEGG: dia:Dtpsy_2217 protein of unknown function DUF6 transmembrane inference protein motif:PFAM:PF00892 db_xref InterPro:IPR000620 2267945 2268709 gene locus_tag Alide2_2168 2267945 2268709 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84539.1||gnl|jgi|Alide2_2168 note KEGG: pau:PA14_31180 hypothetical protein inference similar to AA sequence:KEGG:PA14_31180 2268721 2269035 gene locus_tag Alide2_2169 2268721 2269035 CDS product protein of unknown function DUF736 transl_table 11 protein_id gb|AEB84540.1||gnl|jgi|Alide2_2169 note PFAM: Protein of unknown function DUF736~KEGG: dac:Daci_0462 hypothetical protein inference protein motif:PFAM:PF05284 db_xref InterPro:IPR007948 2269484 2269191 gene locus_tag Alide2_2170 2269484 2269191 CDS product helix-turn-helix domain protein transl_table 11 protein_id gb|AEB84541.1||gnl|jgi|Alide2_2170 note KEGG: bpr:GBP346_A0950 helix-turn-helix domain protein~PFAM: Helix-turn-helix type 3~SMART: Helix-turn-helix type 3 inference protein motif:PFAM:PF01381 db_xref GO:0043565 db_xref InterPro:IPR001387 2269710 2270057 gene locus_tag Alide2_2171 2269710 2270057 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84542.1||gnl|jgi|Alide2_2171 note KEGG: rme:Rmet_1482 hypothetical protein inference similar to AA sequence:KEGG:Rmet_1482 2270314 2270637 gene locus_tag Alide2_2172 2270314 2270637 CDS product transposase IS3/IS911 family protein transl_table 11 protein_id gb|AEB84543.1||gnl|jgi|Alide2_2172 note PFAM: Transposase IS3/IS911family~KEGG: ajs:Ajs_0906 transposase IS3/IS911 family protein inference protein motif:PFAM:PF01527 db_xref GO:0003677 db_xref GO:0004803 db_xref InterPro:IPR002514 2270634 2271548 gene locus_tag Alide2_2173 2270634 2271548 CDS product Integrase catalytic region transl_table 11 protein_id gb|AEB84544.1||gnl|jgi|Alide2_2173 note PFAM: Integrase, catalytic core~KEGG: rpf:Rpic12D_2820 integrase catalytic region inference protein motif:PFAM:PF00665 db_xref GO:0003677 db_xref InterPro:IPR001584 2271720 2272472 gene locus_tag Alide2_2174 2271720 2272472 CDS product Protein of unknown function DUF2285 transl_table 11 protein_id gb|AEB84545.1||gnl|jgi|Alide2_2174 note PFAM: Protein of unknown function DUF2285~KEGG: bpr:GBP346_A0953 hypothetical protein inference protein motif:PFAM:PF10074 db_xref InterPro:IPR018754 2272556 2272837 gene locus_tag Alide2_2175 2272556 2272837 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84546.1||gnl|jgi|Alide2_2175 note KEGG: ajs:Ajs_2652 hypothetical protein inference similar to AA sequence:KEGG:Ajs_2652 2272852 2273697 gene locus_tag Alide2_2176 2272852 2273697 CDS product Replication initiator protein A transl_table 11 protein_id gb|AEB84547.1||gnl|jgi|Alide2_2176 note PFAM: Replication initiator protein A~KEGG: ajs:Ajs_2653 putative replication initiator and transcription repressor protein inference protein motif:PFAM:PF10134 db_xref InterPro:IPR018777 2273951 2274589 gene locus_tag Alide2_2177 2273951 2274589 CDS product Cobyrinic acid ac-diamide synthase transl_table 11 protein_id gb|AEB84548.1||gnl|jgi|Alide2_2177 note PFAM: Cobyrinic acid a,c-diamide synthase~KEGG: rme:Rmet_1255 cobyrinic acid a,c-diamide synthase inference protein motif:PFAM:PF01656 db_xref InterPro:IPR002586 2274586 2274870 gene locus_tag Alide2_2178 2274586 2274870 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84549.1||gnl|jgi|Alide2_2178 note KEGG: bpt:Bpet2187 hypothetical protein inference similar to AA sequence:KEGG:Bpet2187 2274867 2275412 gene locus_tag Alide2_2179 2274867 2275412 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84550.1||gnl|jgi|Alide2_2179 note KEGG: rme:Rmet_1257 hypothetical protein inference similar to AA sequence:KEGG:Rmet_1257 2275409 2275996 gene locus_tag Alide2_2180 2275409 2275996 CDS product Peptidase S26, conserved region transl_table 11 protein_id gb|AEB84551.1||gnl|jgi|Alide2_2180 note PFAM: Peptidase S26, conserved region~KEGG: rme:Rmet_1258 TraF peptidase inference protein motif:PFAM:PF10502 db_xref InterPro:IPR019533 2276445 2278442 gene locus_tag Alide2_2181 2276445 2278442 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84552.1||gnl|jgi|Alide2_2181 note KEGG: pau:PA14_31070 hypothetical protein inference similar to AA sequence:KEGG:PA14_31070 2280316 2278637 gene locus_tag Alide2_2182 2280316 2278637 CDS product Bilirubin oxidase EC_number 1.3.3.5 transl_table 11 protein_id gb|AEB84553.1||gnl|jgi|Alide2_2182 note KEGG: net:Neut_0014 twin-arginine translocation pathway signal~PFAM: Multicopper oxidase, type 3; Multicopper oxidase, type 2 inference protein motif:PRIAM:1.3.3.5 db_xref InterPro:IPR006311 db_xref InterPro:IPR011706 db_xref InterPro:IPR011707 2280604 2280491 gene locus_tag Alide2_2183 2280604 2280491 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84554.1||gnl|jgi|Alide2_2183 inference ab initio prediction:Prodigal:1.4 2281107 2280760 gene locus_tag Alide2_2184 2281107 2280760 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84555.1||gnl|jgi|Alide2_2184 note KEGG: ajs:Ajs_2700 hypothetical protein inference similar to AA sequence:KEGG:Ajs_2700 2282642 2281233 gene locus_tag Alide2_2185 2282642 2281233 CDS product heavy metal sensor signal transduction histidine kinase transl_table 11 protein_id gb|AEB84556.1||gnl|jgi|Alide2_2185 note TIGRFAM: Signal transduction histidine kinase, heavy metal sensor~PFAM: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain~KEGG: dia:Dtpsy_2202 heavy metal sensor signal transduction histidine kinase~SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain inference protein motif:TFAM:TIGR01386 db_xref GO:0000155 db_xref GO:0004673 db_xref InterPro:IPR003594 db_xref InterPro:IPR003660 db_xref InterPro:IPR003661 db_xref InterPro:IPR006290 2283326 2282643 gene locus_tag Alide2_2186 2283326 2282643 CDS product two component heavy metal response transcriptional regulator, winged helix family transl_table 11 protein_id gb|AEB84557.1||gnl|jgi|Alide2_2186 note TIGRFAM: Signal transduction response regulator, heavy metal response~PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal~KEGG: ajs:Ajs_2725 two component heavy metal response transcriptional regulator~SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal inference protein motif:TFAM:TIGR01387 db_xref GO:0000156 db_xref GO:0003677 db_xref InterPro:IPR001789 db_xref InterPro:IPR001867 db_xref InterPro:IPR006291 2283451 2285271 gene locus_tag Alide2_2187 2283451 2285271 CDS product copper-resistance protein, CopA family transl_table 11 protein_id gb|AEB84558.1||gnl|jgi|Alide2_2187 note KEGG: bmj:BMULJ_00903 copper resistance transmembrane protein~TIGRFAM: Copper-resistance protein CopA; Twin-arginine translocation pathway, signal sequence~PFAM: Multicopper oxidase, type 3; Multicopper oxidase, type 1; Multicopper oxidase, type 2 inference protein motif:TFAM:TIGR01480 db_xref GO:0005507 db_xref InterPro:IPR001117 db_xref InterPro:IPR006311 db_xref InterPro:IPR006376 db_xref InterPro:IPR011706 db_xref InterPro:IPR011707 2285478 2286476 gene locus_tag Alide2_2188 2285478 2286476 CDS product copper resistance B precursor transl_table 11 protein_id gb|AEB84559.1||gnl|jgi|Alide2_2188 note KEGG: bmj:BMULJ_00902 copper resistance protein B~manually curated~PFAM: Copper resistance B precursor inference protein motif:PFAM:PF05275 db_xref GO:0005507 db_xref InterPro:IPR007939 2286499 2287005 gene locus_tag Alide2_2189 2286499 2287005 CDS product blue (type 1) copper domain protein transl_table 11 protein_id gb|AEB84560.1||gnl|jgi|Alide2_2189 note PFAM: Blue (type 1) copper domain~KEGG: net:Neut_0023 blue (type1) copper domain-containing protein inference protein motif:PFAM:PF00127 db_xref GO:0005507 db_xref GO:0009055 db_xref InterPro:IPR000923 2287060 2287401 gene locus_tag Alide2_2190 2287060 2287401 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84561.1||gnl|jgi|Alide2_2190 note KEGG: ajs:Ajs_2667 hypothetical protein inference similar to AA sequence:KEGG:Ajs_2667 2287476 2287955 gene locus_tag Alide2_2191 2287476 2287955 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84562.1||gnl|jgi|Alide2_2191 note KEGG: dia:Dtpsy_2195 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_2195 2287966 2288244 gene locus_tag Alide2_2192 2287966 2288244 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84563.1||gnl|jgi|Alide2_2192 note KEGG: dia:Dtpsy_2194 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_2194 2288249 2288890 gene locus_tag Alide2_2193 2288249 2288890 CDS product isoprenylcysteine carboxyl methyltransferase transl_table 11 protein_id gb|AEB84564.1||gnl|jgi|Alide2_2193 note KEGG: dia:Dtpsy_2193 isoprenylcysteine carboxyl methyltransferase inference similar to AA sequence:KEGG:Dtpsy_2193 2288947 2289045 gene locus_tag Alide2_2194 2288947 2289045 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84565.1||gnl|jgi|Alide2_2194 inference ab initio prediction:Prodigal:1.4 2289146 2289424 gene locus_tag Alide2_2195 2289146 2289424 CDS product Heavy metal transport/detoxification protein transl_table 11 protein_id gb|AEB84566.1||gnl|jgi|Alide2_2195 note PFAM: Heavy metal transport/detoxification protein~KEGG: ajs:Ajs_1492 heavy metal transport/detoxification protein inference protein motif:PFAM:PF00403 db_xref GO:0046872 db_xref InterPro:IPR006121 2289434 2291098 gene locus_tag Alide2_2196 2289434 2291098 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84567.1||gnl|jgi|Alide2_2196 note KEGG: rpf:Rpic12D_5298 hypothetical protein inference similar to AA sequence:KEGG:Rpic12D_5298 2291107 2291610 gene locus_tag Alide2_2197 2291107 2291610 CDS product cytochrome c class I transl_table 11 protein_id gb|AEB84568.1||gnl|jgi|Alide2_2197 note PFAM: Cytochrome c, class I~KEGG: dia:Dtpsy_2192 cytochrome c class I inference protein motif:PFAM:PF00034 db_xref GO:0005506 db_xref GO:0009055 db_xref GO:0020037 db_xref InterPro:IPR003088 2291728 2294196 gene locus_tag Alide2_2198 2291728 2294196 CDS product heavy metal translocating P-type ATPase EC_number 3.6.3.4 transl_table 11 protein_id gb|AEB84569.1||gnl|jgi|Alide2_2198 note TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P type, cation/copper-transporter; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter~KEGG: ajs:Ajs_2710 heavy metal translocating P-type ATPase~PFAM: ATPase, P-type, ATPase-associated domain; Haloacid dehalogenase-like hydrolase inference protein motif:TFAM:TIGR01525 db_xref GO:0004008 db_xref GO:0005524 db_xref GO:0046873 db_xref InterPro:IPR001757 db_xref InterPro:IPR005834 db_xref InterPro:IPR006403 db_xref InterPro:IPR006416 db_xref InterPro:IPR008250 2294193 2294432 gene locus_tag Alide2_2199 2294193 2294432 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84570.1||gnl|jgi|Alide2_2199 note KEGG: maq:Maqu_0130 hypothetical protein inference similar to AA sequence:KEGG:Maqu_0130 2294452 2294910 gene locus_tag Alide2_2200 2294452 2294910 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84571.1||gnl|jgi|Alide2_2200 note KEGG: axy:AXYL_01135 hypothetical protein inference similar to AA sequence:KEGG:AXYL_01135 2294986 2296302 gene locus_tag Alide2_2201 2294986 2296302 CDS product heavy metal RND efflux outer membrane protein, CzcC family transl_table 11 protein_id gb|AEB84572.1||gnl|jgi|Alide2_2201 note KEGG: axy:AXYL_01137 heavy metal RND efflux outer membrane protein, CzcC family inference similar to AA sequence:KEGG:AXYL_01137 2296317 2297831 gene locus_tag Alide2_2202 2296317 2297831 CDS product efflux transporter, RND family, MFP subunit transl_table 11 protein_id gb|AEB84573.1||gnl|jgi|Alide2_2202 note TIGRFAM: Secretion protein HlyD~KEGG: axy:AXYL_01138 RND family efflux transporter MFP subunit 3 inference protein motif:TFAM:TIGR01730 db_xref GO:0008565 db_xref InterPro:IPR006143 2297828 2300947 gene locus_tag Alide2_2203 2297828 2300947 CDS product heavy metal efflux pump, CzcA family transl_table 11 protein_id gb|AEB84574.1||gnl|jgi|Alide2_2203 note KEGG: axy:AXYL_01139 cation efflux system protein CusA~TIGRFAM: Heavy metal efflux pump CzcA~PFAM: Acriflavin resistance protein inference protein motif:TFAM:TIGR00914 db_xref GO:0008324 db_xref InterPro:IPR001036 db_xref InterPro:IPR004763 2300973 2301524 gene locus_tag Alide2_2204 pseudo 2302394 2301591 gene locus_tag Alide2_2205 2302394 2301591 CDS product IstB domain protein ATP-binding protein transl_table 11 protein_id gb|AEB84575.1||gnl|jgi|Alide2_2205 note KEGG: axy:AXYL_06594 IstB-like ATP binding family protein 3~PFAM: IstB-like ATP-binding protein~SMART: ATPase, AAA+ type, core inference protein motif:PFAM:PF01695 db_xref GO:0005524 db_xref InterPro:IPR002611 db_xref InterPro:IPR003593 2303910 2302384 gene locus_tag Alide2_2206 2303910 2302384 CDS product Integrase catalytic region transl_table 11 protein_id gb|AEB84576.1||gnl|jgi|Alide2_2206 note PFAM: Integrase, catalytic core~KEGG: axy:AXYL_06593 integrase family protein 10 inference protein motif:PFAM:PF00665 db_xref GO:0003677 db_xref InterPro:IPR001584 2304015 2304365 gene locus_tag Alide2_2207 pseudo 2304823 2305845 gene locus_tag Alide2_2208 2304823 2305845 CDS product integrase family protein transl_table 11 protein_id gb|AEB84577.1||gnl|jgi|Alide2_2208 note PFAM: Integrase, catalytic core, phage~KEGG: bam:Bamb_2021 phage integrase family protein inference protein motif:PFAM:PF00589 db_xref GO:0003677 db_xref InterPro:IPR002104 2307109 2305814 gene locus_tag Alide2_2209 2307109 2305814 CDS product citrate synthase I transl_table 11 protein_id gb|AEB84578.1||gnl|jgi|Alide2_2209 note KEGG: dia:Dtpsy_2288 type II citrate synthase~TIGRFAM: Citrate synthase, type II~PFAM: Citrate synthase-like inference protein motif:TFAM:TIGR01798 db_xref GO:0004108 db_xref InterPro:IPR002020 db_xref InterPro:IPR010953 2307428 2307156 gene locus_tag Alide2_2210 2307428 2307156 CDS product protein of unknown function DUF339 transl_table 11 protein_id gb|AEB84579.1||gnl|jgi|Alide2_2210 note PFAM: Protein of unknown function DUF339~KEGG: ajs:Ajs_2797 hypothetical protein inference protein motif:PFAM:PF03937 db_xref InterPro:IPR005631 2308153 2307449 gene locus_tag Alide2_2211 2308153 2307449 CDS product succinate dehydrogenase and fumarate reductase iron-sulfur protein EC_number 1.3.5.1 transl_table 11 protein_id gb|AEB84580.1||gnl|jgi|Alide2_2211 note TIGRFAM: Succinate dehydrogenase/fumarate reductase iron-sulphur protein~KEGG: dac:Daci_2424 succinate dehydrogenase and fumarate reductase iron-sulfur protein~PFAM: Ferredoxin inference protein motif:TFAM:TIGR00384 db_xref GO:0016491 db_xref InterPro:IPR001041 db_xref InterPro:IPR004489 2309987 2308182 gene locus_tag Alide2_2212 2309987 2308182 CDS product succinate dehydrogenase, flavoprotein subunit EC_number 1.3.5.1 transl_table 11 protein_id gb|AEB84581.1||gnl|jgi|Alide2_2212 note TIGRFAM: Succinate dehydrogenase, flavoprotein subunit; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit~KEGG: dia:Dtpsy_2285 succinate dehydrogenase, flavoprotein subunit~PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal inference protein motif:TFAM:TIGR01816 db_xref GO:0016491 db_xref GO:0050660 db_xref InterPro:IPR003953 db_xref InterPro:IPR004112 db_xref InterPro:IPR011281 db_xref InterPro:IPR014006 2310403 2310038 gene locus_tag Alide2_2213 2310403 2310038 CDS product succinate dehydrogenase, hydrophobic membrane anchor protein transl_table 11 protein_id gb|AEB84582.1||gnl|jgi|Alide2_2213 note KEGG: aav:Aave_2203 succinate dehydrogenase subunit D~TIGRFAM: Succinate dehydrogenase, hydrophobic membrane anchor~PFAM: Succinate dehydrogenase/Fumarate reductase, transmembrane subunit inference protein motif:TFAM:TIGR02968 db_xref GO:0000104 db_xref GO:0020037 db_xref InterPro:IPR000701 db_xref InterPro:IPR014312 2310859 2310428 gene locus_tag Alide2_2214 2310859 2310428 CDS product succinate dehydrogenase, cytochrome b556 subunit transl_table 11 protein_id gb|AEB84583.1||gnl|jgi|Alide2_2214 note KEGG: dia:Dtpsy_2283 succinate dehydrogenase, cytochrome b556 subunit~TIGRFAM: Succinate dehydrogenase, cytochrome b556 subunit~PFAM: Succinate dehydrogenase/Fumarate reductase, transmembrane subunit inference protein motif:TFAM:TIGR02970 db_xref GO:0000104 db_xref InterPro:IPR000701 db_xref InterPro:IPR014314 2311801 2311010 gene locus_tag Alide2_2215 2311801 2311010 CDS product transcriptional regulator, GntR family with UTRA sensor domain transl_table 11 protein_id gb|AEB84584.1||gnl|jgi|Alide2_2215 note KEGG: dia:Dtpsy_2282 transcriptional regulator, GntR family~PFAM: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR~SMART: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR inference protein motif:PFAM:PF07702 db_xref GO:0003677 db_xref GO:0003700 db_xref GO:0030528 db_xref InterPro:IPR000524 db_xref InterPro:IPR011663 2311984 2312970 gene locus_tag Alide2_2216 2311984 2312970 CDS product malate dehydrogenase transl_table 11 protein_id gb|AEB84585.1||gnl|jgi|Alide2_2216 note KEGG: dia:Dtpsy_2281 malate dehydrogenase~TIGRFAM: Malate dehydrogenase, NAD/NADP~PFAM: Lactate/malate dehydrogenase, N-terminal; Lactate/malate dehydrogenase, C-terminal inference protein motif:TFAM:TIGR01759 db_xref GO:0016615 db_xref InterPro:IPR001236 db_xref InterPro:IPR010945 db_xref InterPro:IPR022383 2312983 2313774 gene locus_tag Alide2_2217 2312983 2313774 CDS product Trans-aconitate 2-methyltransferase EC_number 2.1.1.144 transl_table 11 protein_id gb|AEB84586.1||gnl|jgi|Alide2_2217 note KEGG: dac:Daci_2430 trans-aconitate 2-methyltransferase~PFAM: Methyltransferase type 11 inference protein motif:PRIAM:2.1.1.144 db_xref InterPro:IPR013216 2313982 2314626 gene locus_tag Alide2_2218 2313982 2314626 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84587.1||gnl|jgi|Alide2_2218 note KEGG: dia:Dtpsy_2278 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_2278 2314744 2317335 gene locus_tag Alide2_2219 2314744 2317335 CDS product aconitate hydratase 2 transl_table 11 protein_id gb|AEB84588.1||gnl|jgi|Alide2_2219 note KEGG: ajs:Ajs_2787 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase~TIGRFAM: Aconitase B, bacterial~PFAM: Aconitase B, N-terminal, bacterial; Aconitase B, HEAT-like, bacterial; Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha inference protein motif:TFAM:TIGR00117 db_xref GO:0003994 db_xref GO:0005515 db_xref InterPro:IPR001030 db_xref InterPro:IPR004406 db_xref InterPro:IPR015929 db_xref InterPro:IPR015933 2317441 2317516 gene locus_tag Alide2_R0031 note tRNA-Ala2 2317441 2317516 tRNA product tRNA-Ala 2318448 2317555 gene locus_tag Alide2_2220 2318448 2317555 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB84589.1||gnl|jgi|Alide2_2220 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: ctt:CtCNB1_3364 transcriptional regulator, LysR family inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 2318555 2320261 gene locus_tag Alide2_2221 2318555 2320261 CDS product acyl-CoA dehydrogenase domain-containing protein transl_table 11 protein_id gb|AEB84590.1||gnl|jgi|Alide2_2221 note PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain~KEGG: ctt:CtCNB1_3363 acyl-CoA dehydrogenase-like protein inference protein motif:PFAM:PF00441 db_xref GO:0003995 db_xref InterPro:IPR006090 db_xref InterPro:IPR006091 2320368 2321360 gene locus_tag Alide2_2222 2320368 2321360 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84591.1||gnl|jgi|Alide2_2222 note KEGG: ctt:CtCNB1_3361 AccB inference similar to AA sequence:KEGG:CtCNB1_3361 db_xref InterPro:IPR005064 2321367 2322527 gene locus_tag Alide2_2223 2321367 2322527 CDS product Formyl-CoA transferase EC_number 2.8.3.16 transl_table 11 protein_id gb|AEB84592.1||gnl|jgi|Alide2_2223 note KEGG: ctt:CtCNB1_3358 L-carnitine dehydratase/bile acid-inducible~PFAM: CoA-transferase family III inference protein motif:PRIAM:2.8.3.16 db_xref InterPro:IPR003673 2323887 2322538 gene locus_tag Alide2_2224 2323887 2322538 CDS product glutathione-disulfide reductase EC_number 1.8.1.7 transl_table 11 protein_id gb|AEB84593.1||gnl|jgi|Alide2_2224 note TIGRFAM: Glutathione reductase, eukaryote/bacterial~KEGG: dac:Daci_2356 glutathione-disulfide reductase~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation inference protein motif:TFAM:TIGR01421 db_xref GO:0004362 db_xref GO:0050660 db_xref GO:0050661 db_xref InterPro:IPR004099 db_xref InterPro:IPR006322 db_xref InterPro:IPR013027 2324055 2324522 gene locus_tag Alide2_2225 2324055 2324522 CDS product Carbon-monoxide dehydrogenase (acceptor) EC_number 1.2.99.2 transl_table 11 protein_id gb|AEB84594.1||gnl|jgi|Alide2_2225 note KEGG: vei:Veis_4544 2Fe-2S iron-sulfur cluster binding domain-containing protein~PFAM: [2Fe-2S]-binding; Ferredoxin inference protein motif:PRIAM:1.2.99.2 db_xref InterPro:IPR001041 db_xref InterPro:IPR002888 2324556 2326928 gene locus_tag Alide2_2226 2324556 2326928 CDS product Carbon-monoxide dehydrogenase (acceptor) EC_number 1.2.99.2 transl_table 11 protein_id gb|AEB84595.1||gnl|jgi|Alide2_2226 note KEGG: vap:Vapar_1594 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding~PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead inference protein motif:PRIAM:1.2.99.2 db_xref InterPro:IPR000674 db_xref InterPro:IPR008274 2326942 2327733 gene locus_tag Alide2_2227 2326942 2327733 CDS product Carbon-monoxide dehydrogenase (acceptor) EC_number 1.2.99.2 transl_table 11 protein_id gb|AEB84596.1||gnl|jgi|Alide2_2227 note KEGG: pol:Bpro_0576 molybdopterin dehydrogenase, FAD-binding~PFAM: Molybdopterin dehydrogenase, FAD-binding; CO dehydrogenase flavoprotein, C-terminal inference protein motif:PRIAM:1.2.99.2 db_xref InterPro:IPR002346 db_xref InterPro:IPR005107 2327863 2328777 gene locus_tag Alide2_2228 2327863 2328777 CDS product ATPase associated with various cellular activities AAA_5 transl_table 11 protein_id gb|AEB84597.1||gnl|jgi|Alide2_2228 note KEGG: dac:Daci_2251 ATPase~PFAM: ATPase, AAA-5~SMART: ATPase, AAA+ type, core inference protein motif:PFAM:PF07728 db_xref GO:0005524 db_xref GO:0016887 db_xref InterPro:IPR003593 db_xref InterPro:IPR011704 2328780 2330021 gene locus_tag Alide2_2229 2328780 2330021 CDS product VWA containing CoxE family protein transl_table 11 protein_id gb|AEB84598.1||gnl|jgi|Alide2_2229 note KEGG: vei:Veis_4536 VWA containing CoxE family protein~PFAM: vWA containing CoxE-like~SMART: von Willebrand factor, type A inference protein motif:PFAM:PF05762 db_xref InterPro:IPR002035 db_xref InterPro:IPR008912 2330035 2330586 gene locus_tag Alide2_2230 2330035 2330586 CDS product carbon monoxide dehydrogenase subunit G transl_table 11 protein_id gb|AEB84599.1||gnl|jgi|Alide2_2230 note PFAM: Carbon monoxide dehydrogenase subunit G~KEGG: pol:Bpro_0573 carbon monoxide dehydrogenase subunit G inference protein motif:PFAM:PF06240 db_xref InterPro:IPR010419 2330596 2331636 gene locus_tag Alide2_2231 2330596 2331636 CDS product XshC-Cox1-family protein transl_table 11 protein_id gb|AEB84600.1||gnl|jgi|Alide2_2231 note PFAM: XdhC- CoxI~KEGG: pol:Bpro_0572 hypothetical protein inference protein motif:PFAM:PF02625 db_xref InterPro:IPR003777 2331636 2332283 gene locus_tag Alide2_2232 2331636 2332283 CDS product 4-diphosphocytidyl-2C-methyl-D-erythritol synthase transl_table 11 protein_id gb|AEB84601.1||gnl|jgi|Alide2_2232 note PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase~KEGG: aeh:Mlg_1568 molybdenum cofactor cytidylyltransferase inference protein motif:PFAM:PF01128 db_xref GO:0003824 db_xref InterPro:IPR001228 2333166 2332291 gene locus_tag Alide2_2233 2333166 2332291 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84602.1||gnl|jgi|Alide2_2233 note KEGG: dia:Dtpsy_2274 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_2274 2335293 2333269 gene locus_tag Alide2_2234 2335293 2333269 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84603.1||gnl|jgi|Alide2_2234 note KEGG: gox:GOX2135 hypothetical protein inference similar to AA sequence:KEGG:GOX2135 2336639 2335308 gene locus_tag Alide2_2235 2336639 2335308 CDS product amine oxidase transl_table 11 protein_id gb|AEB84604.1||gnl|jgi|Alide2_2235 note PFAM: Amine oxidase~KEGG: xal:XALc_2703 protoporphyrinogen oxidase protein inference protein motif:PFAM:PF01593 db_xref InterPro:IPR002937 2337610 2336645 gene locus_tag Alide2_2236 2337610 2336645 CDS product Lysylphosphatidylglycerol synthetase/UPF0104 transl_table 11 protein_id gb|AEB84605.1||gnl|jgi|Alide2_2236 note KEGG: reh:H16_A2892 hypothetical protein~manually curated~PFAM: Lysylphosphatidylglycerol synthetase/UPF0104 inference protein motif:PFAM:PF03706 db_xref InterPro:IPR005242 db_xref InterPro:IPR022791 2338620 2337607 gene locus_tag Alide2_2237 2338620 2337607 CDS product glycosyl transferase family 2 transl_table 11 protein_id gb|AEB84606.1||gnl|jgi|Alide2_2237 note KEGG: cph:Cpha266_0350 glycosyl transferase family protein~manually curated~PFAM: Glycosyl transferase, family 2 inference protein motif:PFAM:PF00535 db_xref InterPro:IPR001173 2340092 2338719 gene locus_tag Alide2_2238 2340092 2338719 CDS product peptidase U32 transl_table 11 protein_id gb|AEB84607.1||gnl|jgi|Alide2_2238 note PFAM: Peptidase U32~KEGG: dia:Dtpsy_2273 peptidase U32 inference protein motif:PFAM:PF01136 db_xref GO:0008233 db_xref InterPro:IPR001539 2341511 2340141 gene locus_tag Alide2_2239 2341511 2340141 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84608.1||gnl|jgi|Alide2_2239 note KEGG: dac:Daci_1894 hypothetical protein inference similar to AA sequence:KEGG:Daci_1894 2342420 2341539 gene locus_tag Alide2_2240 2342420 2341539 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB84609.1||gnl|jgi|Alide2_2240 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: pol:Bpro_2444 LysR family transcriptional regulator inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 2342519 2344786 gene locus_tag Alide2_2241 pseudo 2344389 2343034 gene locus_tag Alide2_2242 2344389 2343034 CDS product transposase IS4 family protein transl_table 11 protein_id gb|AEB84610.1||gnl|jgi|Alide2_2242 note PFAM: Transposase, IS4-like~KEGG: pna:Pnap_4647 transposase, IS4 family protein inference protein motif:PFAM:PF01609 db_xref GO:0003677 db_xref GO:0004803 db_xref InterPro:IPR002559 2345339 2344806 gene locus_tag Alide2_2243 2345339 2344806 CDS product two component transcriptional regulator, Fis family transl_table 11 protein_id gb|AEB84611.1||gnl|jgi|Alide2_2243 note KEGG: dia:Dtpsy_2271 two component transcriptional regulator, fis family~PFAM: Signal transduction response regulator, receiver domain; Helix-turn-helix, Fis-type~SMART: Signal transduction response regulator, receiver domain inference protein motif:PFAM:PF00072 db_xref GO:0000156 db_xref GO:0003700 db_xref InterPro:IPR001789 db_xref InterPro:IPR002197 2346656 2345340 gene locus_tag Alide2_2244 2346656 2345340 CDS product integral membrane sensor signal transduction histidine kinase transl_table 11 protein_id gb|AEB84612.1||gnl|jgi|Alide2_2244 note KEGG: ajs:Ajs_2780 integral membrane sensor signal transduction histidine kinase~PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain~SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain inference protein motif:PFAM:PF02518 db_xref GO:0000155 db_xref GO:0005524 db_xref InterPro:IPR003594 db_xref InterPro:IPR003661 2347462 2346653 gene locus_tag Alide2_2245 2347462 2346653 CDS product Surfeit locus 1 family protein transl_table 11 protein_id gb|AEB84613.1||gnl|jgi|Alide2_2245 note PFAM: Surfeit locus 1~KEGG: ajs:Ajs_2779 surfeit locus 1 family protein inference protein motif:PFAM:PF02104 db_xref InterPro:IPR002994 2347833 2347459 gene locus_tag Alide2_2246 2347833 2347459 CDS product cytochrome o ubiquinol oxidase subunit IV transl_table 11 protein_id gb|AEB84614.1||gnl|jgi|Alide2_2246 note KEGG: ajs:Ajs_2778 cytochrome c oxidase subunit IV~TIGRFAM: Cytochrome o ubiquinol oxidase subunit IV~PFAM: Cytochrome C oxidase subunit IV prokaryotic inference protein motif:TFAM:TIGR02847 db_xref GO:0008827 db_xref InterPro:IPR005171 db_xref InterPro:IPR014210 2348466 2347834 gene locus_tag Alide2_2247 2348466 2347834 CDS product cytochrome o ubiquinol oxidase, subunit III transl_table 11 protein_id gb|AEB84615.1||gnl|jgi|Alide2_2247 note KEGG: dia:Dtpsy_2267 cytochrome o ubiquinol oxidase, subunit III~TIGRFAM: Cytochrome o ubiquinol oxidase, subunit III~PFAM: Cytochrome c oxidase, subunit III inference protein motif:TFAM:TIGR02842 db_xref GO:0050661 db_xref InterPro:IPR000298 db_xref InterPro:IPR014206 2350465 2348459 gene locus_tag Alide2_2248 2350465 2348459 CDS product cytochrome o ubiquinol oxidase, subunit I EC_number 1.9.3.1 transl_table 11 protein_id gb|AEB84616.1||gnl|jgi|Alide2_2248 note TIGRFAM: Cytochrome o ubiquinol oxidase, subunit I~KEGG: ajs:Ajs_2776 cytochrome-c oxidase~PFAM: Cytochrome c oxidase, subunit I inference protein motif:TFAM:TIGR02843 db_xref GO:0020037 db_xref InterPro:IPR000883 db_xref InterPro:IPR014207 2351479 2350490 gene locus_tag Alide2_2249 2351479 2350490 CDS product ubiquinol oxidase, subunit II transl_table 11 protein_id gb|AEB84617.1||gnl|jgi|Alide2_2249 note KEGG: ajs:Ajs_2775 ubiquinol oxidase, subunit II~TIGRFAM: Cytochrome o ubiquinol oxidase subunit II~PFAM: COX aromatic rich; Cytochrome c oxidase subunit II C-terminal inference protein motif:TFAM:TIGR01433 db_xref GO:0050661 db_xref InterPro:IPR002429 db_xref InterPro:IPR006333 db_xref InterPro:IPR010514 2351781 2353112 gene locus_tag Alide2_2250 2351781 2353112 CDS product General substrate transporter transl_table 11 protein_id gb|AEB84618.1||gnl|jgi|Alide2_2250 note PFAM: General substrate transporter~KEGG: ajs:Ajs_2774 general substrate transporter inference protein motif:PFAM:PF00083 db_xref GO:0005215 db_xref InterPro:IPR005828 2354183 2353221 gene locus_tag Alide2_2251 2354183 2353221 CDS product protein TolA transl_table 11 protein_id gb|AEB84619.1||gnl|jgi|Alide2_2251 note KEGG: dia:Dtpsy_2263 protein TolA~TIGRFAM: Tol-Pal system, TolA; TonB, C-terminal~PFAM: Tol-Pal system, TolA inference protein motif:TFAM:TIGR02794 db_xref GO:0005215 db_xref GO:0008565 db_xref InterPro:IPR006260 db_xref InterPro:IPR014161 2354630 2354205 gene locus_tag Alide2_2252 2354630 2354205 CDS product Biopolymer transport protein ExbD/TolR transl_table 11 protein_id gb|AEB84620.1||gnl|jgi|Alide2_2252 note PFAM: Biopolymer transport protein ExbD/TolR~KEGG: ajs:Ajs_2772 biopolymer transport protein ExbD/TolR inference protein motif:PFAM:PF02472 db_xref GO:0005215 db_xref InterPro:IPR003400 2355345 2354644 gene locus_tag Alide2_2253 2355345 2354644 CDS product protein TolQ transl_table 11 protein_id gb|AEB84621.1||gnl|jgi|Alide2_2253 note KEGG: dia:Dtpsy_2261 protein TolQ~TIGRFAM: Tol-Pal system, TolQ~PFAM: MotA/TolQ/ExbB proton channel inference protein motif:TFAM:TIGR02796 db_xref InterPro:IPR002898 db_xref InterPro:IPR014163 2355764 2355342 gene locus_tag Alide2_2254 2355764 2355342 CDS product tol-pal system-associated acyl-CoA thioesterase transl_table 11 protein_id gb|AEB84622.1||gnl|jgi|Alide2_2254 note KEGG: dia:Dtpsy_2260 tol-pal system-associated acyl-CoA thioesterase~TIGRFAM: Tol-Pal system-associated acyl-CoA thioesterase; 4-hydroxybenzoyl-CoA thioesterase~PFAM: Thioesterase superfamily inference protein motif:TFAM:TIGR02799 db_xref GO:0005515 db_xref GO:0016787 db_xref GO:0016790 db_xref InterPro:IPR006683 db_xref InterPro:IPR006684 db_xref InterPro:IPR014166 2356951 2355767 gene locus_tag Alide2_2255 2356951 2355767 CDS product Aspartate transaminase EC_number 2.6.1.1 transl_table 11 protein_id gb|AEB84623.1||gnl|jgi|Alide2_2255 note KEGG: dia:Dtpsy_2259 aminotransferase~PFAM: Aminotransferase, class I/classII inference protein motif:PRIAM:2.6.1.1 db_xref InterPro:IPR004839 2357568 2357023 gene locus_tag Alide2_2256 2357568 2357023 CDS product NusB antitermination factor transl_table 11 protein_id gb|AEB84624.1||gnl|jgi|Alide2_2256 note TIGRFAM: NusB antitermination factor~HAMAP: NusB antitermination factor~KEGG: dia:Dtpsy_2258 NusB antitermination factor~PFAM: NusB/RsmB/TIM44 inference protein motif:HAMAP:MF_00073 db_xref InterPro:IPR006027 db_xref InterPro:IPR011605 2358029 2357565 gene locus_tag Alide2_2257 2358029 2357565 CDS product 6,7-dimethyl-8-ribityllumazine synthase transl_table 11 protein_id gb|AEB84625.1||gnl|jgi|Alide2_2257 note KEGG: ajs:Ajs_2767 6,7-dimethyl-8-ribityllumazine synthase~TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase~PFAM: 6,7-dimethyl-8-ribityllumazine synthase inference protein motif:TFAM:TIGR00114 db_xref InterPro:IPR002180 2359154 2358033 gene locus_tag Alide2_2258 2359154 2358033 CDS product 3,4-dihydroxy-2-butanone 4-phosphate synthase transl_table 11 protein_id gb|AEB84626.1||gnl|jgi|Alide2_2258 note KEGG: dia:Dtpsy_2256 3,4-dihydroxy-2-butanone 4-phosphate synthase~TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB~PFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB; GTP cyclohydrolase II, RibA inference protein motif:TFAM:TIGR00506 db_xref GO:0008686 db_xref InterPro:IPR000422 db_xref InterPro:IPR000926 2359579 2359292 gene locus_tag Alide2_2259 2359579 2359292 CDS product ferredoxin transl_table 11 protein_id gb|AEB84627.1||gnl|jgi|Alide2_2259 note PFAM: Ferredoxin~KEGG: dia:Dtpsy_2255 ferredoxin inference protein motif:PFAM:PF00111 db_xref GO:0009055 db_xref GO:0051536 db_xref InterPro:IPR001041 2360818 2359937 gene locus_tag Alide2_2260 2360818 2359937 CDS product NUDIX hydrolase transl_table 11 protein_id gb|AEB84628.1||gnl|jgi|Alide2_2260 note PFAM: NUDIX hydrolase domain~KEGG: pna:Pnap_2699 NUDIX hydrolase inference protein motif:PFAM:PF00293 db_xref GO:0016787 db_xref InterPro:IPR000086 2360949 2361857 gene locus_tag Alide2_2261 2360949 2361857 CDS product 3-hydroxyacyl-CoA dehydrogenase EC_number 1.1.1.35 transl_table 11 protein_id gb|AEB84629.1||gnl|jgi|Alide2_2261 note KEGG: ajs:Ajs_2522 short-chain dehydrogenase/reductase SDR~PFAM: Short-chain dehydrogenase/reductase SDR inference protein motif:PRIAM:1.1.1.35 db_xref InterPro:IPR002198 2361965 2363497 gene locus_tag Alide2_2262 2361965 2363497 CDS product glutamate/cysteine ligase EC_number 6.3.2.2 transl_table 11 protein_id gb|AEB84630.1||gnl|jgi|Alide2_2262 note TIGRFAM: Glutamate--cysteine ligase, monofunctional~KEGG: dia:Dtpsy_1339 glutamate/cysteine ligase~PFAM: Glutamate--cysteine ligase inference protein motif:TFAM:TIGR01434 db_xref GO:0004357 db_xref InterPro:IPR006334 db_xref InterPro:IPR007370 2363540 2365723 gene locus_tag Alide2_2263 2363540 2365723 CDS product protein of unknown function DUF893 YccS/YhfK transl_table 11 protein_id gb|AEB84631.1||gnl|jgi|Alide2_2263 note KEGG: vap:Vapar_3567 protein of unknown function DUF893 YccS/YhfK inference similar to AA sequence:KEGG:Vapar_3567 2365932 2365720 gene locus_tag Alide2_2264 2365932 2365720 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84632.1||gnl|jgi|Alide2_2264 note KEGG: aav:Aave_2269 hypothetical protein inference similar to AA sequence:KEGG:Aave_2269 2366395 2366030 gene locus_tag Alide2_2265 2366395 2366030 CDS product Endoribonuclease L-PSP transl_table 11 protein_id gb|AEB84633.1||gnl|jgi|Alide2_2265 note PFAM: Endoribonuclease L-PSP~KEGG: pol:Bpro_4413 endoribonuclease L-PSP inference protein motif:PFAM:PF01042 db_xref InterPro:IPR006175 2367818 2366430 gene locus_tag Alide2_2266 2367818 2366430 CDS product BFD domain protein (2Fe-2S)-binding domain protein transl_table 11 protein_id gb|AEB84634.1||gnl|jgi|Alide2_2266 note PFAM: BFD-like [2Fe-2S]-binding domain; FAD-dependent pyridine nucleotide-disulphide oxidoreductase~KEGG: pol:Bpro_4414 BFD-like (2Fe-2S)-binding region inference protein motif:PFAM:PF04324 db_xref InterPro:IPR007419 db_xref InterPro:IPR013027 2368164 2367820 gene locus_tag Alide2_2267 2368164 2367820 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84635.1||gnl|jgi|Alide2_2267 note KEGG: pol:Bpro_4415 hypothetical protein inference similar to AA sequence:KEGG:Bpro_4415 2369290 2368154 gene locus_tag Alide2_2268 2369290 2368154 CDS product FAD dependent oxidoreductase transl_table 11 protein_id gb|AEB84636.1||gnl|jgi|Alide2_2268 note KEGG: pol:Bpro_4416 FAD dependent oxidoreductase~manually curated~PFAM: FAD dependent oxidoreductase inference protein motif:PFAM:PF01266 db_xref GO:0016491 db_xref InterPro:IPR006076 2370318 2369335 gene locus_tag Alide2_2269 2370318 2369335 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84637.1||gnl|jgi|Alide2_2269 note KEGG: dac:Daci_0779 hypothetical protein inference similar to AA sequence:KEGG:Daci_0779 db_xref InterPro:IPR005064 2371316 2370393 gene locus_tag Alide2_2270 2371316 2370393 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB84638.1||gnl|jgi|Alide2_2270 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: pol:Bpro_4347 LysR family transcriptional regulator inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 2371489 2372448 gene locus_tag Alide2_2271 2371489 2372448 CDS product ribosome biogenesis GTP-binding protein YlqF transl_table 11 protein_id gb|AEB84639.1||gnl|jgi|Alide2_2271 note KEGG: ajs:Ajs_2510 GTP-binding protein, HSR1-related~TIGRFAM: GTP-binding protein, ribosome biogenesis, YlqF~PFAM: GTP-binding protein, HSR1-related inference protein motif:TFAM:TIGR03596 db_xref InterPro:IPR002917 db_xref InterPro:IPR019991 2374359 2372530 gene locus_tag Alide2_2272 2374359 2372530 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84640.1||gnl|jgi|Alide2_2272 note KEGG: dia:Dtpsy_1352 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_1352 2375176 2374406 gene locus_tag Alide2_2273 2375176 2374406 CDS product pseudouridine synthase transl_table 11 protein_id gb|AEB84641.1||gnl|jgi|Alide2_2273 note KEGG: dia:Dtpsy_1355 pseudouridine synthase~manually curated~PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F inference protein motif:PFAM:PF00849 db_xref GO:0003723 db_xref GO:0009982 db_xref InterPro:IPR006145 2375466 2375173 gene locus_tag Alide2_2274 2375466 2375173 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84642.1||gnl|jgi|Alide2_2274 note KEGG: dia:Dtpsy_1356 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_1356 2375570 2376496 gene locus_tag Alide2_2275 2375570 2376496 CDS product phosphoesterase DHHA1 transl_table 11 protein_id gb|AEB84643.1||gnl|jgi|Alide2_2275 note PFAM: Phosphoesterase, DHHA1~KEGG: ajs:Ajs_2502 phosphoesterase, DHHA1 inference protein motif:PFAM:PF02272 db_xref GO:0003676 db_xref InterPro:IPR003156 2377782 2376547 gene locus_tag Alide2_2276 2377782 2376547 CDS product major facilitator superfamily MFS_1 transl_table 11 protein_id gb|AEB84644.1||gnl|jgi|Alide2_2276 note PFAM: Major facilitator superfamily MFS-1~KEGG: aav:Aave_2285 major facilitator superfamily transporter inference protein motif:PFAM:PF07690 db_xref InterPro:IPR011701 2378249 2377824 gene locus_tag Alide2_2277 2378249 2377824 CDS product nuclease (SNase domain-containing protein) transl_table 11 protein_id gb|AEB84645.1||gnl|jgi|Alide2_2277 note KEGG: ajs:Ajs_2501 nuclease~PFAM: Staphylococcal nuclease (SNase-like)~SMART: Staphylococcal nuclease (SNase-like) inference protein motif:PFAM:PF00565 db_xref GO:0003676 db_xref InterPro:IPR006021 2378348 2379223 gene locus_tag Alide2_2278 2378348 2379223 CDS product RarD protein, DMT superfamily transporter transl_table 11 protein_id gb|AEB84646.1||gnl|jgi|Alide2_2278 note TIGRFAM: RarD protein~KEGG: dia:Dtpsy_1360 RarD protein, DMT superfamily transporter inference protein motif:TFAM:TIGR00688 db_xref GO:0005215 db_xref InterPro:IPR004626 2379823 2379257 gene locus_tag Alide2_2279 2379823 2379257 CDS product pseudouridine synthase Rsu transl_table 11 protein_id gb|AEB84647.1||gnl|jgi|Alide2_2279 note KEGG: dia:Dtpsy_1363 pseudouridine synthase~TIGRFAM: Pseudouridine synthase, RsuA/RluB/E/F~PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F inference protein motif:TFAM:TIGR00093 db_xref GO:0003723 db_xref GO:0016866 db_xref InterPro:IPR000748 db_xref InterPro:IPR006145 2380650 2379820 gene locus_tag Alide2_2280 2380650 2379820 CDS product Peptidase M23 transl_table 11 protein_id gb|AEB84648.1||gnl|jgi|Alide2_2280 note PFAM: Peptidase M23~KEGG: ajs:Ajs_2496 peptidase M23B inference protein motif:PFAM:PF01551 db_xref InterPro:IPR016047 2380923 2382326 gene locus_tag Alide2_2281 2380923 2382326 CDS product Aspartate ammonia-lyase EC_number 4.3.1.1 transl_table 11 protein_id gb|AEB84649.1||gnl|jgi|Alide2_2281 note KEGG: dia:Dtpsy_1365 fumarate lyase~PFAM: Lyase 1, N-terminal; Fumarase C, C-terminal inference protein motif:PRIAM:4.3.1.1 db_xref InterPro:IPR018951 db_xref InterPro:IPR022761 2383205 2382399 gene locus_tag Alide2_2282 2383205 2382399 CDS product protein of unknown function DUF306 Meta and HslJ transl_table 11 protein_id gb|AEB84650.1||gnl|jgi|Alide2_2282 note PFAM: Domain of unknown function DUF306, Meta/HslJ~KEGG: dac:Daci_2483 hypothetical protein inference protein motif:PFAM:PF03724 db_xref InterPro:IPR005184 2383810 2383271 gene locus_tag Alide2_2283 2383810 2383271 CDS product protein of unknown function DUF924 transl_table 11 protein_id gb|AEB84651.1||gnl|jgi|Alide2_2283 note PFAM: Protein of unknown function DUF924~KEGG: hel:HELO_3084 protein of unknown function DUF924 inference protein motif:PFAM:PF06041 db_xref InterPro:IPR010323 2385639 2383828 gene locus_tag Alide2_2284 2385639 2383828 CDS product glutaminyl-tRNA synthetase EC_number 6.1.1.18 transl_table 11 protein_id gb|AEB84652.1||gnl|jgi|Alide2_2284 note TIGRFAM: Glutaminyl-tRNA synthetase, class Ic~KEGG: ajs:Ajs_1608 glutaminyl-tRNA synthetase~PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain inference protein motif:TFAM:TIGR00440 db_xref GO:0000166 db_xref GO:0004819 db_xref GO:0005524 db_xref InterPro:IPR004514 db_xref InterPro:IPR020058 db_xref InterPro:IPR020059 2385779 2386117 gene locus_tag Alide2_2285 2385779 2386117 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84653.1||gnl|jgi|Alide2_2285 note KEGG: dia:Dtpsy_2105 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_2105 2386226 2386675 gene locus_tag Alide2_2286 2386226 2386675 CDS product 3-dehydroquinate dehydratase, type II EC_number 4.2.1.10 transl_table 11 protein_id gb|AEB84654.1||gnl|jgi|Alide2_2286 note TIGRFAM: Dehydroquinase, class II~KEGG: ajs:Ajs_1610 3-dehydroquinate dehydratase~PFAM: Dehydroquinase, class II inference protein motif:TFAM:TIGR01088 db_xref GO:0003855 db_xref InterPro:IPR001874 2386669 2387562 gene locus_tag Alide2_2287 2386669 2387562 CDS product alpha/beta hydrolase fold protein transl_table 11 protein_id gb|AEB84655.1||gnl|jgi|Alide2_2287 note PFAM: Alpha/beta hydrolase fold-1~KEGG: dia:Dtpsy_2103 alpha/beta hydrolase fold protein inference protein motif:PFAM:PF00561 db_xref InterPro:IPR000073 2387559 2387984 gene locus_tag Alide2_2288 2387559 2387984 CDS product Class I peptide chain release factor transl_table 11 protein_id gb|AEB84656.1||gnl|jgi|Alide2_2288 note PFAM: Peptide chain release factor class I/class II~KEGG: dia:Dtpsy_2102 class I peptide chain release factor inference protein motif:PFAM:PF00472 db_xref GO:0003747 db_xref InterPro:IPR000352 2388086 2388922 gene locus_tag Alide2_2289 2388086 2388922 CDS product Extradiol ring-cleavage dioxygenase class III protein subunit B transl_table 11 protein_id gb|AEB84657.1||gnl|jgi|Alide2_2289 note PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B~KEGG: ajs:Ajs_1613 extradiol ring-cleavage dioxygenase III subunit B inference protein motif:PFAM:PF02900 db_xref GO:0008198 db_xref GO:0016491 db_xref InterPro:IPR004183 2388919 2389614 gene locus_tag Alide2_2290 2388919 2389614 CDS product phospholipase/Carboxylesterase transl_table 11 protein_id gb|AEB84658.1||gnl|jgi|Alide2_2290 note PFAM: Phospholipase/carboxylesterase~KEGG: vei:Veis_2297 phospholipase/carboxylesterase inference protein motif:PFAM:PF02230 db_xref GO:0016787 db_xref InterPro:IPR003140 2389795 2390673 gene locus_tag Alide2_2291 2389795 2390673 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84659.1||gnl|jgi|Alide2_2291 note KEGG: ajs:Ajs_1615 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1615 2391162 2390692 gene locus_tag Alide2_2292 2391162 2390692 CDS product transcriptional regulator, AsnC family transl_table 11 protein_id gb|AEB84660.1||gnl|jgi|Alide2_2292 note KEGG: ajs:Ajs_1616 AsnC family transcriptional regulator~PFAM: Transcription regulator AsnC-type, C-terminal~SMART: Transcription regulator AsnC-type inference protein motif:PFAM:PF01037 db_xref GO:0003700 db_xref GO:0043565 db_xref InterPro:IPR019887 db_xref InterPro:IPR019888 2391266 2393893 gene locus_tag Alide2_2293 2391266 2393893 CDS product 2-oxo-acid dehydrogenase E1 subunit, homodimeric type EC_number 1.2.4.1 transl_table 11 protein_id gb|AEB84661.1||gnl|jgi|Alide2_2293 note TIGRFAM: 2-oxo-acid dehydrogenase E1 component homodimeric type; Alpha-ketoglutarate dehydrogenase~KEGG: ajs:Ajs_1617 2-oxoacid dehydrogenase subunit E1~PFAM: Transketolase, N-terminal; Transketolase-like, pyrimidine-binding domain inference protein motif:TFAM:TIGR00759 db_xref GO:0016491 db_xref InterPro:IPR004660 db_xref InterPro:IPR005474 db_xref InterPro:IPR005475 db_xref InterPro:IPR017600 2395193 2393910 gene locus_tag Alide2_2294 2395193 2393910 CDS product Amidase transl_table 11 protein_id gb|AEB84662.1||gnl|jgi|Alide2_2294 note PFAM: Amidase~KEGG: bpt:Bpet0082 putative amidase inference protein motif:PFAM:PF01425 db_xref GO:0003747 db_xref InterPro:IPR000120 2396194 2395202 gene locus_tag Alide2_2295 2396194 2395202 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84663.1||gnl|jgi|Alide2_2295 note KEGG: aav:Aave_3937 hypothetical protein inference similar to AA sequence:KEGG:Aave_3937 db_xref InterPro:IPR005064 2396305 2397222 gene locus_tag Alide2_2296 2396305 2397222 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB84664.1||gnl|jgi|Alide2_2296 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: hmg:100212933 similar to lysR transcriptional regulator inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 2397257 2398036 gene locus_tag Alide2_2297 2397257 2398036 CDS product GntR domain protein transl_table 11 protein_id gb|AEB84665.1||gnl|jgi|Alide2_2297 note KEGG: vap:Vapar_5148 GntR domain protein~PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR~SMART: GntR, C-terminal; HTH transcriptional regulator, GntR inference protein motif:PFAM:PF07729 db_xref GO:0003700 db_xref InterPro:IPR000524 db_xref InterPro:IPR011711 2398189 2399511 gene locus_tag Alide2_2298 2398189 2399511 CDS product major facilitator superfamily MFS_1 transl_table 11 protein_id gb|AEB84666.1||gnl|jgi|Alide2_2298 note PFAM: Major facilitator superfamily MFS-1~KEGG: vap:Vapar_5147 major facilitator superfamily MFS_1 inference protein motif:PFAM:PF07690 db_xref InterPro:IPR011701 2399523 2400413 gene locus_tag Alide2_2299 2399523 2400413 CDS product 3-hydroxyisobutyrate dehydrogenase EC_number 1.1.1.31 transl_table 11 protein_id gb|AEB84667.1||gnl|jgi|Alide2_2299 note KEGG: vap:Vapar_5146 3-hydroxyisobutyrate dehydrogenase~PFAM: 6-phosphogluconate dehydrogenase, NAD-binding inference protein motif:PRIAM:1.1.1.31 db_xref InterPro:IPR006115 2400484 2401497 gene locus_tag Alide2_2300 2400484 2401497 CDS product NAD-dependent epimerase/dehydratase transl_table 11 protein_id gb|AEB84668.1||gnl|jgi|Alide2_2300 note PFAM: NAD-dependent epimerase/dehydratase~KEGG: vap:Vapar_5145 NAD-dependent epimerase/dehydratase inference protein motif:PFAM:PF01370 db_xref GO:0003824 db_xref GO:0050662 db_xref InterPro:IPR001509 2401501 2402763 gene locus_tag Alide2_2301 2401501 2402763 CDS product type III effector Hrp-dependent outer protein transl_table 11 protein_id gb|AEB84669.1||gnl|jgi|Alide2_2301 note PFAM: Protein of unknown function, DUF1537~KEGG: vap:Vapar_5144 type III effector Hrp-dependent outers inference protein motif:PFAM:PF07005 db_xref InterPro:IPR010737 2402760 2403425 gene locus_tag Alide2_2302 2402760 2403425 CDS product class II aldolase/adducin family protein transl_table 11 protein_id gb|AEB84670.1||gnl|jgi|Alide2_2302 note PFAM: Class II aldolase/adducin, N-terminal~KEGG: vap:Vapar_5143 putative aldolase inference protein motif:PFAM:PF00596 db_xref GO:0046872 db_xref InterPro:IPR001303 2403435 2404244 gene locus_tag Alide2_2303 2403435 2404244 CDS product Hydroxypyruvate isomerase EC_number 5.3.1.22 transl_table 11 protein_id gb|AEB84671.1||gnl|jgi|Alide2_2303 note KEGG: pol:Bpro_4876 hydroxypyruvate isomerase~PFAM: Xylose isomerase, TIM barrel domain inference protein motif:PRIAM:5.3.1.22 db_xref InterPro:IPR012307 2405119 2404286 gene locus_tag Alide2_2304 2405119 2404286 CDS product protein of unknown function DUF980 transl_table 11 protein_id gb|AEB84672.1||gnl|jgi|Alide2_2304 note PFAM: Protein of unknown function DUF980~KEGG: ajs:Ajs_1618 hypothetical protein inference protein motif:PFAM:PF06167 db_xref InterPro:IPR010384 2405906 2405124 gene locus_tag Alide2_2305 2405906 2405124 CDS product metallophosphoesterase transl_table 11 protein_id gb|AEB84673.1||gnl|jgi|Alide2_2305 note PFAM: Metallo-dependent phosphatase~KEGG: dia:Dtpsy_2095 UDP-2,3-diacylglucosamine hydrolase inference protein motif:PFAM:PF00149 db_xref GO:0016787 db_xref InterPro:IPR004843 2406438 2405911 gene locus_tag Alide2_2306 2406438 2405911 CDS product Peptidylprolyl isomerase EC_number 5.2.1.8 transl_table 11 protein_id gb|AEB84674.1||gnl|jgi|Alide2_2306 note KEGG: dia:Dtpsy_2094 peptidyl-prolyl cis-trans isomerase cyclophilin type~PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type inference protein motif:PRIAM:5.2.1.8 db_xref InterPro:IPR002130 2407047 2406460 gene locus_tag Alide2_2307 2407047 2406460 CDS product Peptidylprolyl isomerase EC_number 5.2.1.8 transl_table 11 protein_id gb|AEB84675.1||gnl|jgi|Alide2_2307 note KEGG: dia:Dtpsy_2093 peptidyl-prolyl cis-trans isomerase cyclophilin type~PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type inference protein motif:PRIAM:5.2.1.8 db_xref InterPro:IPR002130 2408414 2407044 gene locus_tag Alide2_2308 2408414 2407044 CDS product ErfK/YbiS/YcfS/YnhG family protein transl_table 11 protein_id gb|AEB84676.1||gnl|jgi|Alide2_2308 note PFAM: YkuD domain~KEGG: aav:Aave_2318 ErfK/YbiS/YcfS/YnhG inference protein motif:PFAM:PF03734 db_xref InterPro:IPR005490 2409563 2408493 gene locus_tag Alide2_2309 2409563 2408493 CDS product Tetratricopeptide TPR_1 repeat-containing protein transl_table 11 protein_id gb|AEB84677.1||gnl|jgi|Alide2_2309 note PFAM: Tetratricopeptide TPR-1~KEGG: aav:Aave_2319 TPR repeat-containing protein inference protein motif:PFAM:PF00515 db_xref InterPro:IPR001440 db_xref InterPro:IPR019734 2409787 2411163 gene locus_tag Alide2_2310 2409787 2411163 CDS product cysteinyl-tRNA synthetase EC_number 6.1.1.16 transl_table 11 protein_id gb|AEB84678.1||gnl|jgi|Alide2_2310 note SMART: Cysteinyl-tRNA synthetase, class Ia, DALR~TIGRFAM: Cysteinyl-tRNA synthetase, class Ia~KEGG: ajs:Ajs_1623 cysteinyl-tRNA synthetase~PFAM: Cysteinyl-tRNA synthetase, class Ia; Cysteinyl-tRNA synthetase, class Ia, DALR inference protein motif:TFAM:TIGR00435 db_xref GO:0000166 db_xref GO:0004817 db_xref GO:0005524 db_xref InterPro:IPR015273 db_xref InterPro:IPR015803 2411209 2411856 gene locus_tag Alide2_2311 2411209 2411856 CDS product DNA-3-methyladenine glycosylase II EC_number 3.2.2.21 transl_table 11 protein_id gb|AEB84679.1||gnl|jgi|Alide2_2311 note SMART: HhH-GPD domain~manually curated~KEGG: dia:Dtpsy_2090 HhH-GPD family protein~PFAM: HhH-GPD domain inference protein motif:PRIAM:3.2.2.21 db_xref InterPro:IPR003265 2411908 2412885 gene locus_tag Alide2_2312 2411908 2412885 CDS product Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha EC_number 6.4.1.2 transl_table 11 protein_id gb|AEB84680.1||gnl|jgi|Alide2_2312 note PFAM: Acetyl-CoA carboxylase, alpha subunit~TIGRFAM: Acetyl-CoA carboxylase, alpha subunit~HAMAP: Acetyl-CoA carboxylase, alpha subunit~KEGG: ajs:Ajs_1625 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha inference protein motif:HAMAP:MF_00823 db_xref InterPro:IPR001095 2412953 2413960 gene locus_tag Alide2_2313 2412953 2413960 CDS product tRNA(Ile)-lysidine synthetase transl_table 11 protein_id gb|AEB84681.1||gnl|jgi|Alide2_2313 note KEGG: ajs:Ajs_1627 tRNA(Ile)-lysidine synthetase~TIGRFAM: Lysidine-tRNA(Ile) synthetase, N-terminal~PFAM: tRNA(Ile)-lysidine/2-thiocytidine synthase; Lysidine-tRNA(Ile) synthetase, substrate-binding domain inference protein motif:TFAM:TIGR02432 db_xref GO:0000166 db_xref GO:0005524 db_xref InterPro:IPR011063 db_xref InterPro:IPR012795 db_xref InterPro:IPR015262 2413997 2415268 gene locus_tag Alide2_2314 2413997 2415268 CDS product aspartate kinase transl_table 11 protein_id gb|AEB84682.1||gnl|jgi|Alide2_2314 note KEGG: aav:Aave_2324 aspartate kinase~TIGRFAM: Aspartate kinase domain; Aspartate kinase, monofunctional class~PFAM: Aspartate/glutamate/uridylate kinase; Amino acid-binding ACT inference protein motif:TFAM:TIGR00657 db_xref GO:0004072 db_xref InterPro:IPR001048 db_xref InterPro:IPR001341 db_xref InterPro:IPR002912 db_xref InterPro:IPR005260 2416670 2415315 gene locus_tag Alide2_2315 2416670 2415315 CDS product Cl- channel voltage-gated family protein transl_table 11 protein_id gb|AEB84683.1||gnl|jgi|Alide2_2315 note PFAM: Chloride channel, voltage gated~KEGG: aav:Aave_4712 Cl-channel, voltage-gated family protein inference protein motif:PFAM:PF00654 db_xref GO:0005247 db_xref InterPro:IPR001807 2416746 2416838 gene locus_tag Alide2_R0032 note tRNA-Ser3 2416746 2416838 tRNA product tRNA-Ser 2417121 2417729 gene locus_tag Alide2_2316 2417121 2417729 CDS product regulatory protein TetR transl_table 11 protein_id gb|AEB84684.1||gnl|jgi|Alide2_2316 note PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal~KEGG: ajs:Ajs_1833 TetR family transcriptional regulator inference protein motif:PFAM:PF00440 db_xref GO:0003700 db_xref InterPro:IPR001647 2417726 2418877 gene locus_tag Alide2_2317 2417726 2418877 CDS product efflux transporter, RND family, MFP subunit transl_table 11 protein_id gb|AEB84685.1||gnl|jgi|Alide2_2317 note KEGG: dia:Dtpsy_1685 efflux transporter, RND family, MFP subunit~TIGRFAM: Secretion protein HlyD~PFAM: Secretion protein HlyD inference protein motif:TFAM:TIGR01730 db_xref GO:0008565 db_xref InterPro:IPR006143 2418874 2420073 gene locus_tag Alide2_2318 2418874 2420073 CDS product protein of unknown function DUF214 transl_table 11 protein_id gb|AEB84686.1||gnl|jgi|Alide2_2318 note PFAM: Domain of unknown function DUF214, ABC transporter permease~KEGG: dia:Dtpsy_1686 protein of unknown function DUF214 inference protein motif:PFAM:PF02687 db_xref InterPro:IPR003838 2420078 2420788 gene locus_tag Alide2_2319 2420078 2420788 CDS product Phosphonate-transporting ATPase EC_number 3.6.3.28 transl_table 11 protein_id gb|AEB84687.1||gnl|jgi|Alide2_2319 note PFAM: ABC transporter-like~KEGG: ajs:Ajs_1836 ABC transporter related~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.28 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 2422187 2420859 gene locus_tag Alide2_2320 2422187 2420859 CDS product lytic murein transglycosylase transl_table 11 protein_id gb|AEB84688.1||gnl|jgi|Alide2_2320 note KEGG: ajs:Ajs_1837 lytic murein transglycosylase~TIGRFAM: Lytic murein transglycosylase~PFAM: Peptidoglycan binding-like inference protein motif:TFAM:TIGR02283 db_xref InterPro:IPR002477 db_xref InterPro:IPR011970 2422234 2423670 gene locus_tag Alide2_2321 2422234 2423670 CDS product Exodeoxyribonuclease I EC_number 3.1.11.1 transl_table 11 protein_id gb|AEB84689.1||gnl|jgi|Alide2_2321 note KEGG: ajs:Ajs_1838 exonuclease I~PFAM: Exonuclease C-terminal; Exonuclease, RNase T/DNA polymerase III inference protein motif:PRIAM:3.1.11.1 db_xref InterPro:IPR013520 db_xref InterPro:IPR013620 2423642 2424490 gene locus_tag Alide2_2322 2423642 2424490 CDS product Silent information regulator protein Sir2 transl_table 11 protein_id gb|AEB84690.1||gnl|jgi|Alide2_2322 note PFAM: NAD-dependent histone deacetylase, silent information regulator Sir2~KEGG: ajs:Ajs_1839 silent information regulator protein Sir2 inference protein motif:PFAM:PF02146 db_xref GO:0008270 db_xref GO:0070403 db_xref InterPro:IPR003000 2424623 2426986 gene locus_tag Alide2_2323 2424623 2426986 CDS product putative phytochrome sensor protein transl_table 11 protein_id gb|AEB84691.1||gnl|jgi|Alide2_2323 note KEGG: dia:Dtpsy_1696 putative phytochrome sensor protein~PFAM: Uncharacterised protein family UPF0118; GAF~SMART: GAF inference protein motif:PFAM:PF01594 db_xref InterPro:IPR002549 db_xref InterPro:IPR003018 2427537 2426968 gene locus_tag Alide2_2324 2427537 2426968 CDS product GCN5-related N-acetyltransferase transl_table 11 protein_id gb|AEB84692.1||gnl|jgi|Alide2_2324 note PFAM: GCN5-related N-acetyltransferase (GNAT) domain~KEGG: aav:Aave_3219 GCN5-related N-acetyltransferase inference protein motif:PFAM:PF00583 db_xref GO:0008080 db_xref InterPro:IPR000182 2428163 2427534 gene locus_tag Alide2_2325 2428163 2427534 CDS product uracil phosphoribosyltransferase transl_table 11 protein_id gb|AEB84693.1||gnl|jgi|Alide2_2325 note KEGG: xtr:100496255 uracil phosphoribosyltransferase-like~TIGRFAM: Uracil phosphoribosyl transferase~PFAM: Phosphoribosyltransferase inference protein motif:TFAM:TIGR01091 db_xref GO:0004845 db_xref InterPro:IPR000836 db_xref InterPro:IPR005765 2429238 2428252 gene locus_tag Alide2_2326 2429238 2428252 CDS product Threo-3-hydroxyaspartate ammonia-lyase EC_number 4.3.1.16 transl_table 11 protein_id gb|AEB84694.1||gnl|jgi|Alide2_2326 note KEGG: dia:Dtpsy_1698 pyridoxal-5'-phosphate-dependent protein beta subunit~PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit inference protein motif:PRIAM:4.3.1.16 db_xref InterPro:IPR001926 2429489 2430193 gene locus_tag Alide2_2327 2429489 2430193 CDS product protein of unknown function DUF28 transl_table 11 protein_id gb|AEB84695.1||gnl|jgi|Alide2_2327 note PFAM: Protein of unknown function DUF28~KEGG: dia:Dtpsy_1700 hypothetical protein inference protein motif:PFAM:PF01709 db_xref InterPro:IPR002876 2430327 2430481 gene locus_tag Alide2_2328 pseudo 2430857 2432281 gene locus_tag Alide2_2329 2430857 2432281 CDS product cytochrome c oxidase accessory protein CcoG transl_table 11 protein_id gb|AEB84696.1||gnl|jgi|Alide2_2329 note TIGRFAM: Cytochrome c oxidase cbb3 type, accessory protein FixG~KEGG: dia:Dtpsy_1004 cytochrome c oxidase accessory protein CcoG inference protein motif:TFAM:TIGR02745 db_xref InterPro:IPR014116 2432308 2433726 gene locus_tag Alide2_2330 2432308 2433726 CDS product cytochrome bd ubiquinol oxidase subunit I transl_table 11 protein_id gb|AEB84697.1||gnl|jgi|Alide2_2330 note PFAM: Cytochrome d ubiquinol oxidase, subunit I~KEGG: ara:Arad_12230 cytochrome bd-type quinol oxidase subunit 1 inference protein motif:PFAM:PF01654 db_xref GO:0016491 db_xref InterPro:IPR002585 2433730 2434740 gene locus_tag Alide2_2331 2433730 2434740 CDS product cytochrome d ubiquinol oxidase, subunit II transl_table 11 protein_id gb|AEB84698.1||gnl|jgi|Alide2_2331 note KEGG: msl:Msil_2643 cytochrome d ubiquinol oxidase, subunit II~TIGRFAM: Cytochrome d ubiquinol oxidase, subunit II~PFAM: Cytochrome d ubiquinol oxidase, subunit II inference protein motif:TFAM:TIGR00203 db_xref InterPro:IPR003317 2434740 2434886 gene locus_tag Alide2_2332 2434740 2434886 CDS product Protein of unknown function DUF2474 transl_table 11 protein_id gb|AEB84699.1||gnl|jgi|Alide2_2332 note PFAM: Protein of unknown function DUF2474~KEGG: ara:Arad_12232 hypothetical protein inference protein motif:PFAM:PF10617 db_xref InterPro:IPR018895 2435996 2435301 gene locus_tag Alide2_2333 2435996 2435301 CDS product LrgB family protein transl_table 11 protein_id gb|AEB84700.1||gnl|jgi|Alide2_2333 note PFAM: LrgB-like protein~KEGG: dia:Dtpsy_2405 LrgB family protein inference protein motif:PFAM:PF04172 db_xref InterPro:IPR007300 2436394 2435993 gene locus_tag Alide2_2334 2436394 2435993 CDS product LrgA family protein transl_table 11 protein_id gb|AEB84701.1||gnl|jgi|Alide2_2334 note PFAM: Uncharacterised protein family LrgA/YohJ~KEGG: dac:Daci_2210 LrgA family protein inference protein motif:PFAM:PF03788 db_xref InterPro:IPR005538 2436603 2438030 gene locus_tag Alide2_2335 2436603 2438030 CDS product transcriptional regulator, GntR family with aminotransferase domain EC_number 2.6.1.57 transl_table 11 protein_id gb|AEB84702.1||gnl|jgi|Alide2_2335 note PFAM: HTH transcriptional regulator, GntR; Aminotransferase, class I/classII~KEGG: mpt:Mpe_A0752 GntR family transcriptional regulator~SMART: HTH transcriptional regulator, GntR inference protein motif:PRIAM:2.6.1.57 db_xref InterPro:IPR000524 db_xref InterPro:IPR004839 2438820 2438119 gene locus_tag Alide2_2336 2438820 2438119 CDS product Glutathione S-transferase domain protein transl_table 11 protein_id gb|AEB84703.1||gnl|jgi|Alide2_2336 note PFAM: Glutathione S-transferase, C-terminal; Glutathione S-transferase, N-terminal~KEGG: dia:Dtpsy_1701 glutathione S-transferase domain protein inference protein motif:PFAM:PF00043 db_xref InterPro:IPR004045 db_xref InterPro:IPR004046 2440396 2438891 gene locus_tag Alide2_2337 2440396 2438891 CDS product protein of unknown function DUF853 NPT hydrolase transl_table 11 protein_id gb|AEB84704.1||gnl|jgi|Alide2_2337 note KEGG: dia:Dtpsy_1702 protein of unknown function DUF853 NPT hydrolase putative~PFAM: Protein of unknown function DUF853, nucleotide triphosphate hydrolase, putative~SMART: ATPase, AAA+ type, core inference protein motif:PFAM:PF05872 db_xref InterPro:IPR003593 db_xref InterPro:IPR008571 2440469 2441188 gene locus_tag Alide2_2338 2440469 2441188 CDS product UPF0082 protein yeeN transl_table 11 protein_id gb|AEB84705.1||gnl|jgi|Alide2_2338 note TIGRFAM: Protein of unknown function DUF28~HAMAP: Protein of unknown function DUF28~KEGG: dia:Dtpsy_1703 hypothetical protein~PFAM: Protein of unknown function DUF28 inference protein motif:HAMAP:MF_00693 db_xref InterPro:IPR002876 2441185 2442471 gene locus_tag Alide2_2339 2441185 2442471 CDS product phosphoribosylamine/glycine ligase EC_number 6.3.4.13 transl_table 11 protein_id gb|AEB84706.1||gnl|jgi|Alide2_2339 note TIGRFAM: Phosphoribosylglycinamide synthetase~KEGG: ajs:Ajs_1899 phosphoribosylamine--glycine ligase~PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain inference protein motif:TFAM:TIGR00877 db_xref GO:0004637 db_xref InterPro:IPR000115 db_xref InterPro:IPR020560 db_xref InterPro:IPR020561 db_xref InterPro:IPR020562 2442471 2443397 gene locus_tag Alide2_2340 2442471 2443397 CDS product Coproporphyrinogen-III oxidase, aerobic EC_number 1.3.3.3 transl_table 11 protein_id gb|AEB84707.1||gnl|jgi|Alide2_2340 note HAMAP: Coproporphyrinogen III oxidase~KEGG: dia:Dtpsy_1705 coproporphyrinogen III oxidase~PFAM: Coproporphyrinogen III oxidase inference protein motif:HAMAP:MF_00333 db_xref InterPro:IPR001260 2443481 2444161 gene locus_tag Alide2_2341 2443481 2444161 CDS product iojap-like protein transl_table 11 protein_id gb|AEB84708.1||gnl|jgi|Alide2_2341 note KEGG: dia:Dtpsy_1706 iojap-like protein~TIGRFAM: Ribosome-associated, Iojap-like~PFAM: Ribosome-associated, Iojap-like inference protein motif:TFAM:TIGR00090 db_xref InterPro:IPR004394 2444161 2444628 gene locus_tag Alide2_2342 2444161 2444628 CDS product Ribosomal RNA large subunit methyltransferase H transl_table 11 protein_id gb|AEB84709.1||gnl|jgi|Alide2_2342 note TIGRFAM: Ribosomal RNA large subunit methyltransferase H~HAMAP: SPOUT methyltransferase, predicted~KEGG: aav:Aave_3199 rRNA large subunit methyltransferase~PFAM: SPOUT methyltransferase, predicted inference protein motif:HAMAP:MF_00658 db_xref InterPro:IPR003742 db_xref InterPro:IPR016051 2444696 2445301 gene locus_tag Alide2_2343 2444696 2445301 CDS product maf protein transl_table 11 protein_id gb|AEB84710.1||gnl|jgi|Alide2_2343 note KEGG: xtr:100495456 hypothetical protein LOC100495456~TIGRFAM: Maf-like protein~PFAM: Maf-like protein inference protein motif:TFAM:TIGR00172 db_xref InterPro:IPR003697 2446026 2445307 gene locus_tag Alide2_2344 2446026 2445307 CDS product transcriptional regulator, Crp/Fnr family transl_table 11 protein_id gb|AEB84711.1||gnl|jgi|Alide2_2344 note KEGG: dia:Dtpsy_1709 transcriptional regulator, Crp/Fnr family~PFAM: Cyclic nucleotide-binding domain~SMART: Cyclic nucleotide-binding domain; HTH transcriptional regulator, Crp inference protein motif:PFAM:PF00027 db_xref InterPro:IPR000595 db_xref InterPro:IPR001808 2447828 2446233 gene locus_tag Alide2_2345 2447828 2446233 CDS product Hydroxylamine reductase EC_number 1.7.99.1 transl_table 11 protein_id gb|AEB84712.1||gnl|jgi|Alide2_2345 note KEGG: dia:Dtpsy_1710 cytochrome d1 heme region~PFAM: Cytochrome c, class I inference protein motif:PRIAM:1.7.99.1 db_xref InterPro:IPR003088 2449041 2447821 gene locus_tag Alide2_2346 2449041 2447821 CDS product Radical SAM domain protein transl_table 11 protein_id gb|AEB84713.1||gnl|jgi|Alide2_2346 note KEGG: dia:Dtpsy_1711 radical SAM domain protein~PFAM: Radical SAM~SMART: Elongator protein 3/MiaB/NifB inference protein motif:PFAM:PF04055 db_xref GO:0003824 db_xref GO:0051536 db_xref InterPro:IPR006638 db_xref InterPro:IPR007197 2449523 2449044 gene locus_tag Alide2_2347 2449523 2449044 CDS product putative transcriptional regulator, AsnC family transl_table 11 protein_id gb|AEB84714.1||gnl|jgi|Alide2_2347 note KEGG: ajs:Ajs_1907 AsnC family transcriptional regulator inference similar to AA sequence:KEGG:Ajs_1907 2451006 2449504 gene locus_tag Alide2_2348 2451006 2449504 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84715.1||gnl|jgi|Alide2_2348 note KEGG: dia:Dtpsy_1714 putative transcriptional regulator, AsnC family inference similar to AA sequence:KEGG:Dtpsy_1714 2452218 2451010 gene locus_tag Alide2_2349 2452218 2451010 CDS product cytochrome d1, heme region transl_table 11 protein_id gb|AEB84716.1||gnl|jgi|Alide2_2349 note KEGG: ajs:Ajs_1910 cytochrome d1, heme region inference similar to AA sequence:KEGG:Ajs_1910 2452568 2452215 gene locus_tag Alide2_2350 2452568 2452215 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84717.1||gnl|jgi|Alide2_2350 note KEGG: dia:Dtpsy_1716 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_1716 2454315 2452591 gene locus_tag Alide2_2351 2454315 2452591 CDS product Hydroxylamine reductase EC_number 1.7.99.1 transl_table 11 protein_id gb|AEB84718.1||gnl|jgi|Alide2_2351 note KEGG: dia:Dtpsy_1717 hydroxylamine reductase~PFAM: Cytochrome c, class I inference protein motif:PRIAM:1.7.99.1 db_xref InterPro:IPR003088 2454527 2455354 gene locus_tag Alide2_2352 2454527 2455354 CDS product uroporphyrin-III C-methyltransferase EC_number 2.1.1.107 transl_table 11 protein_id gb|AEB84719.1||gnl|jgi|Alide2_2352 note TIGRFAM: Uroporphyrin-III C-methyltransferase, C-terminal~KEGG: dia:Dtpsy_1718 uroporphyrin-III C-methyltransferase~PFAM: Tetrapyrrole methylase inference protein motif:TFAM:TIGR01469 db_xref GO:0008168 db_xref InterPro:IPR000878 db_xref InterPro:IPR006366 2455436 2456923 gene locus_tag Alide2_2353 2455436 2456923 CDS product ribonuclease, Rne/Rng family transl_table 11 protein_id gb|AEB84720.1||gnl|jgi|Alide2_2353 note TIGRFAM: Ribonuclease E/G~PFAM: RNA-binding protein AU-1/Ribonuclease E/G; Ribosomal protein S1, RNA-binding domain~KEGG: ajs:Ajs_1914 ribonuclease G~SMART: RNA-binding domain, S1 inference protein motif:TFAM:TIGR00757 db_xref GO:0004540 db_xref InterPro:IPR003029 db_xref InterPro:IPR004659 db_xref InterPro:IPR019307 db_xref InterPro:IPR022967 2457099 2458784 gene locus_tag Alide2_2354 2457099 2458784 CDS product diguanylate cyclase transl_table 11 protein_id gb|AEB84721.1||gnl|jgi|Alide2_2354 note TIGRFAM: Diguanylate cyclase, predicted~PFAM: Diguanylate cyclase, predicted~KEGG: pca:Pcar_0095 putative sensory transduction system, regulatory protein~SMART: Diguanylate cyclase, predicted inference protein motif:TFAM:TIGR00254 db_xref InterPro:IPR000160 2459491 2458718 gene locus_tag Alide2_2355 2459491 2458718 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB84722.1||gnl|jgi|Alide2_2355 note PFAM: LysR, substrate-binding~KEGG: hmg:100212933 similar to lysR transcriptional regulator inference protein motif:PFAM:PF03466 db_xref InterPro:IPR005119 2460711 2459560 gene locus_tag Alide2_2356 2460711 2459560 CDS product Kynurenine--oxoglutarate transaminase EC_number 2.6.1.7 transl_table 11 protein_id gb|AEB84723.1||gnl|jgi|Alide2_2356 note KEGG: dia:Dtpsy_1720 putative aminotransferase~PFAM: Aminotransferase, class I/classII inference protein motif:PRIAM:2.6.1.7 db_xref InterPro:IPR004839 2461794 2460853 gene locus_tag Alide2_2357 2461794 2460853 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB84724.1||gnl|jgi|Alide2_2357 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: dia:Dtpsy_1721 transcriptional regulator CysB-like protein inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 2462218 2461838 gene locus_tag Alide2_2358 2462218 2461838 CDS product cobalamin (vitamin B12) biosynthesis CbiX protein transl_table 11 protein_id gb|AEB84725.1||gnl|jgi|Alide2_2358 note PFAM: Cobalamin (vitamin B12) biosynthesis CbiX~KEGG: dia:Dtpsy_1722 cobalamin (vitamin B12) biosynthesis CbiX protein inference protein motif:PFAM:PF01903 db_xref GO:0016829 db_xref GO:0046872 db_xref InterPro:IPR002762 2463352 2462252 gene locus_tag Alide2_2359 2463352 2462252 CDS product permease YjgP/YjgQ family protein transl_table 11 protein_id gb|AEB84726.1||gnl|jgi|Alide2_2359 note PFAM: Permease YjgP/YjgQ, predicted~KEGG: dia:Dtpsy_1723 permease YjgP/YjgQ family protein inference protein motif:PFAM:PF03739 db_xref InterPro:IPR005495 2464443 2463349 gene locus_tag Alide2_2360 2464443 2463349 CDS product permease YjgP/YjgQ family protein transl_table 11 protein_id gb|AEB84727.1||gnl|jgi|Alide2_2360 note KEGG: dia:Dtpsy_1724 permease YjgP/YjgQ family protein~manually curated~PFAM: Permease YjgP/YjgQ, predicted inference protein motif:PFAM:PF03739 db_xref InterPro:IPR005495 2464467 2465960 gene locus_tag Alide2_2361 2464467 2465960 CDS product peptidase M17 leucyl aminopeptidase domain protein transl_table 11 protein_id gb|AEB84728.1||gnl|jgi|Alide2_2361 note PFAM: Peptidase M17, leucyl aminopeptidase, C-terminal; Peptidase M17, leucyl aminopeptidase, N-terminal~KEGG: ajs:Ajs_1921 PepA aminopeptidase inference protein motif:PFAM:PF00883 db_xref GO:0004177 db_xref InterPro:IPR000819 db_xref InterPro:IPR008283 2465960 2466424 gene locus_tag Alide2_2362 2465960 2466424 CDS product DNA polymerase III chi subunit HolC transl_table 11 protein_id gb|AEB84729.1||gnl|jgi|Alide2_2362 note PFAM: DNA polymerase III chi subunit, HolC~KEGG: ajs:Ajs_1922 DNA polymerase III chi subunit, HolC inference protein motif:PFAM:PF04364 db_xref GO:0003677 db_xref GO:0003887 db_xref InterPro:IPR007459 2466424 2466825 gene locus_tag Alide2_2363 2466424 2466825 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84730.1||gnl|jgi|Alide2_2363 note KEGG: dia:Dtpsy_1727 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_1727 2466954 2468087 gene locus_tag Alide2_2364 2466954 2468087 CDS product Extracellular ligand-binding receptor transl_table 11 protein_id gb|AEB84731.1||gnl|jgi|Alide2_2364 note PFAM: Extracellular ligand-binding receptor~KEGG: ajs:Ajs_1925 extracellular ligand-binding receptor inference protein motif:PFAM:PF01094 db_xref InterPro:IPR001828 2469185 2468178 gene locus_tag Alide2_2365 2469185 2468178 CDS product Phosphoglycerate dehydrogenase EC_number 1.1.1.95 transl_table 11 protein_id gb|AEB84732.1||gnl|jgi|Alide2_2365 note KEGG: ajs:Ajs_1926 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding~PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain inference protein motif:PRIAM:1.1.1.95 db_xref InterPro:IPR006139 db_xref InterPro:IPR006140 2469408 2469602 gene locus_tag Alide2_2366 pseudo 2470899 2469924 gene locus_tag Alide2_2367 pseudo 2471235 2470987 gene locus_tag Alide2_2368 pseudo 2471601 2472131 gene locus_tag Alide2_2369 2471601 2472131 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84733.1||gnl|jgi|Alide2_2369 note manually curated~KEGG: ajs:Ajs_1927 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1927 2472156 2472905 gene locus_tag Alide2_2370 2472156 2472905 CDS product Protein of unknown function DUF2257 transl_table 11 protein_id gb|AEB84734.1||gnl|jgi|Alide2_2370 note KEGG: dia:Dtpsy_1731 hypothetical protein~manually curated~PFAM: Protein of unknown function DUF2257 inference protein motif:PFAM:PF10014 db_xref InterPro:IPR018724 2473000 2473440 gene locus_tag Alide2_2371 2473000 2473440 CDS product UspA domain-containing protein transl_table 11 protein_id gb|AEB84735.1||gnl|jgi|Alide2_2371 note PFAM: UspA~KEGG: dia:Dtpsy_1732 UspA domain protein inference protein motif:PFAM:PF00582 db_xref InterPro:IPR006016 2474014 2473502 gene locus_tag Alide2_2372 2474014 2473502 CDS product hemerythrin-like metal-binding protein transl_table 11 protein_id gb|AEB84736.1||gnl|jgi|Alide2_2372 note KEGG: dac:Daci_4355 hypothetical protein~TIGRFAM: Haemerythrin-like, metal-binding~PFAM: Haemerythrin/HHE cation-binding motif inference protein motif:TFAM:TIGR02481 db_xref GO:0046872 db_xref InterPro:IPR012312 db_xref InterPro:IPR012827 2475104 2474127 gene locus_tag Alide2_2373 2475104 2474127 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84737.1||gnl|jgi|Alide2_2373 note KEGG: ajs:Ajs_1930 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1930 db_xref InterPro:IPR005064 2476429 2475245 gene locus_tag Alide2_2374 2476429 2475245 CDS product acetyl-CoA acetyltransferase EC_number 2.3.1.9 transl_table 11 protein_id gb|AEB84738.1||gnl|jgi|Alide2_2374 note TIGRFAM: Thiolase~KEGG: xtr:100490341 acetyl-CoA acetyltransferase-like~PFAM: Thiolase, N-terminal; Thiolase, C-terminal inference protein motif:TFAM:TIGR01930 db_xref GO:0051287 db_xref InterPro:IPR002155 db_xref InterPro:IPR020616 db_xref InterPro:IPR020617 2477308 2476538 gene locus_tag Alide2_2375 2477308 2476538 CDS product short-chain dehydrogenase/reductase SDR transl_table 11 protein_id gb|AEB84739.1||gnl|jgi|Alide2_2375 note PFAM: Short-chain dehydrogenase/reductase SDR~KEGG: dia:Dtpsy_1735 short-chain dehydrogenase/reductase SDR inference protein motif:PFAM:PF00106 db_xref GO:0016491 db_xref InterPro:IPR002198 2478019 2477342 gene locus_tag Alide2_2376 2478019 2477342 CDS product pseudouridine synthase transl_table 11 protein_id gb|AEB84740.1||gnl|jgi|Alide2_2376 note PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F~KEGG: ajs:Ajs_1933 ribosomal large subunit pseudouridine synthase A inference protein motif:PFAM:PF00849 db_xref GO:0003723 db_xref GO:0009982 db_xref InterPro:IPR006145 2480177 2478009 gene locus_tag Alide2_2377 2480177 2478009 CDS product PAS/PAC sensor hybrid histidine kinase transl_table 11 protein_id gb|AEB84741.1||gnl|jgi|Alide2_2377 note TIGRFAM: PAS~PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS fold; Signal transduction response regulator, receiver domain~KEGG: dia:Dtpsy_1737 signal transduction histidine kinase, nitrogen specific, NtrB~SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS; Signal transduction response regulator, receiver domain inference protein motif:TFAM:TIGR00229 db_xref GO:0004871 db_xref InterPro:IPR000014 db_xref InterPro:IPR001789 db_xref InterPro:IPR003594 db_xref InterPro:IPR003661 db_xref InterPro:IPR013767 2480621 2480223 gene locus_tag Alide2_2378 2480621 2480223 CDS product Peptidylprolyl isomerase EC_number 5.2.1.8 transl_table 11 protein_id gb|AEB84742.1||gnl|jgi|Alide2_2378 note KEGG: dia:Dtpsy_1738 peptidylprolyl isomerase~PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type inference protein motif:PRIAM:5.2.1.8 db_xref InterPro:IPR001179 2480901 2481695 gene locus_tag Alide2_2379 2480901 2481695 CDS product two component transcriptional regulator, LuxR family transl_table 11 protein_id gb|AEB84743.1||gnl|jgi|Alide2_2379 note KEGG: dia:Dtpsy_1772 two component transcriptional regulator, LuxR family~PFAM: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain~SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain inference protein motif:PFAM:PF00196 db_xref GO:0000156 db_xref GO:0003700 db_xref GO:0043565 db_xref InterPro:IPR000792 db_xref InterPro:IPR001789 2481733 2482593 gene locus_tag Alide2_2380 2481733 2482593 CDS product integral membrane sensor signal transduction histidine kinase transl_table 11 protein_id gb|AEB84744.1||gnl|jgi|Alide2_2380 note KEGG: dia:Dtpsy_1773 putative signal transduction histidine kinase~PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain~SMART: ATPase-like, ATP-binding domain inference protein motif:PFAM:PF02518 db_xref GO:0000155 db_xref GO:0005524 db_xref GO:0046983 db_xref InterPro:IPR003594 db_xref InterPro:IPR011712 2482685 2483272 gene locus_tag Alide2_2381 2482685 2483272 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84745.1||gnl|jgi|Alide2_2381 note KEGG: dia:Dtpsy_1406 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_1406 2484110 2483280 gene locus_tag Alide2_2382 2484110 2483280 CDS product Redoxin domain protein transl_table 11 protein_id gb|AEB84746.1||gnl|jgi|Alide2_2382 note PFAM: Redoxin~KEGG: ajs:Ajs_2433 redoxin domain-containing protein inference protein motif:PFAM:PF08534 db_xref GO:0016491 db_xref InterPro:IPR013740 2484337 2484960 gene locus_tag Alide2_2383 2484337 2484960 CDS product 2',5' RNA ligase transl_table 11 protein_id gb|AEB84747.1||gnl|jgi|Alide2_2383 note KEGG: dia:Dtpsy_1426 2',5' RNA ligase inference similar to AA sequence:KEGG:Dtpsy_1426 2485514 2485035 gene locus_tag Alide2_2384 2485514 2485035 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84748.1||gnl|jgi|Alide2_2384 note KEGG: ajs:Ajs_2417 hypothetical protein inference similar to AA sequence:KEGG:Ajs_2417 2486111 2485641 gene locus_tag Alide2_2385 2486111 2485641 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84749.1||gnl|jgi|Alide2_2385 note KEGG: dia:Dtpsy_1431 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_1431 2486551 2486108 gene locus_tag Alide2_2386 2486551 2486108 CDS product putative transmembrane anti-sigma factor transl_table 11 protein_id gb|AEB84750.1||gnl|jgi|Alide2_2386 note KEGG: dia:Dtpsy_1432 putative transmembrane anti-sigma factor inference similar to AA sequence:KEGG:Dtpsy_1432 2487121 2486567 gene locus_tag Alide2_2387 2487121 2486567 CDS product RNA polymerase, sigma-24 subunit, ECF subfamily transl_table 11 protein_id gb|AEB84751.1||gnl|jgi|Alide2_2387 note KEGG: dia:Dtpsy_1433 RNA polymerase, sigma-24 subunit, ECF subfamily~TIGRFAM: RNA polymerase sigma-70~PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2 inference protein motif:TFAM:TIGR02937 db_xref GO:0003677 db_xref GO:0003700 db_xref GO:0016987 db_xref InterPro:IPR007627 db_xref InterPro:IPR013249 db_xref InterPro:IPR014284 2487224 2487544 gene locus_tag Alide2_2388 2487224 2487544 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84752.1||gnl|jgi|Alide2_2388 note KEGG: dia:Dtpsy_1434 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_1434 2487596 2489047 gene locus_tag Alide2_2389 2487596 2489047 CDS product 23S rRNA (uracil-5-)-methyltransferase rumA transl_table 11 protein_id gb|AEB84753.1||gnl|jgi|Alide2_2389 note PFAM: (Uracil-5)-methyltransferase~manually curated~TIGRFAM: 23S rRNA methyltransferase/RumA~KEGG: dia:Dtpsy_1435 23S rRNA 5-methyluridine methyltransferase~HAMAP: 23S rRNA methyltransferase/RumA inference protein motif:HAMAP:MF_01010 db_xref InterPro:IPR001566 db_xref InterPro:IPR010280 2489059 2490402 gene locus_tag Alide2_2390 2489059 2490402 CDS product D-serine dehydratase EC_number 4.3.1.18 transl_table 11 protein_id gb|AEB84754.1||gnl|jgi|Alide2_2390 note PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit~TIGRFAM: D-serine ammonia-lyase~HAMAP: D-serine dehydratase~KEGG: ajs:Ajs_2250 D-serine dehydratase inference protein motif:HAMAP:MF_01030 db_xref InterPro:IPR001926 db_xref InterPro:IPR011780 2491008 2490418 gene locus_tag Alide2_2391 2491008 2490418 CDS product Uncharacterized protein family UPF0029, Impact, N-terminal protein transl_table 11 protein_id gb|AEB84755.1||gnl|jgi|Alide2_2391 note PFAM: Uncharacterised protein family UPF0029, Impact, N-terminal; Uncharacterised protein family UPF0029, Impact, C-terminal~KEGG: ajs:Ajs_2244 hypothetical protein inference protein motif:PFAM:PF01205 db_xref InterPro:IPR001498 db_xref InterPro:IPR015269 2491190 2491648 gene locus_tag Alide2_2392 2491190 2491648 CDS product azurin blue-copper protein transl_table 11 protein_id gb|AEB84756.1||gnl|jgi|Alide2_2392 note KEGG: har:HEAR1365 azurin precursor~TIGRFAM: Azurin, proteobacteria~PFAM: Blue (type 1) copper domain inference protein motif:TFAM:TIGR02695 db_xref InterPro:IPR000923 db_xref InterPro:IPR014068 2491725 2494151 gene locus_tag Alide2_2393 2491725 2494151 CDS product UPF0313 protein ygiQ transl_table 11 protein_id gb|AEB84757.1||gnl|jgi|Alide2_2393 note HAMAP: Uncharacterised protein family UPF0313~PFAM: Radical SAM N-terminal; Radical SAM~KEGG: dia:Dtpsy_1631 radical SAM domain protein~SMART: Elongator protein 3/MiaB/NifB inference protein motif:HAMAP:MF_01251 db_xref InterPro:IPR006638 db_xref InterPro:IPR007197 db_xref InterPro:IPR013704 db_xref InterPro:IPR022946 2495457 2494261 gene locus_tag Alide2_2394 2495457 2494261 CDS product Aspartate transaminase EC_number 2.6.1.1 transl_table 11 protein_id gb|AEB84758.1||gnl|jgi|Alide2_2394 note KEGG: ajs:Ajs_2151 aromatic amino acid aminotransferase~PFAM: Aminotransferase, class I/classII inference protein motif:PRIAM:2.6.1.1 db_xref InterPro:IPR004839 2495573 2497660 gene locus_tag Alide2_2395 2495573 2497660 CDS product excinuclease ABC, B subunit transl_table 11 protein_id gb|AEB84759.1||gnl|jgi|Alide2_2395 note TIGRFAM: Excinuclease ABC, B subunit~PFAM: Helicase, C-terminal; UvrB/UvrC protein; Restriction endonuclease, type I, R subunit/Type III, Res subunit~KEGG: dia:Dtpsy_1636 excinuclease ABC subunit B~SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal inference protein motif:TFAM:TIGR00631 db_xref GO:0003677 db_xref GO:0005524 db_xref GO:0009381 db_xref InterPro:IPR001650 db_xref InterPro:IPR001943 db_xref InterPro:IPR004807 db_xref InterPro:IPR006935 db_xref InterPro:IPR014001 2497911 2498447 gene locus_tag Alide2_2396 2497911 2498447 CDS product transcriptional regulator, BadM/Rrf2 family transl_table 11 protein_id gb|AEB84760.1||gnl|jgi|Alide2_2396 note KEGG: dia:Dtpsy_1637 transcriptional regulator, BadM/Rrf2 family~TIGRFAM: ISC system FeS cluster assembly, IscR transcription factor; Transcription regulator Rrf2~PFAM: Transcription regulator Rrf2 inference protein motif:TFAM:TIGR02010 db_xref GO:0003690 db_xref GO:0003700 db_xref InterPro:IPR000944 db_xref InterPro:IPR010242 2498523 2499743 gene locus_tag Alide2_2397 2498523 2499743 CDS product cysteine desulfurase IscS EC_number 2.8.1.7 transl_table 11 protein_id gb|AEB84761.1||gnl|jgi|Alide2_2397 note TIGRFAM: Cysteine desulfurase~KEGG: dia:Dtpsy_1638 cysteine desulfurase IscS~PFAM: Aminotransferase, class V/Cysteine desulfurase inference protein motif:TFAM:TIGR02006 db_xref GO:0030170 db_xref GO:0031071 db_xref InterPro:IPR000192 db_xref InterPro:IPR010240 2499766 2500167 gene locus_tag Alide2_2398 2499766 2500167 CDS product FeS cluster assembly scaffold IscU transl_table 11 protein_id gb|AEB84762.1||gnl|jgi|Alide2_2398 note KEGG: dia:Dtpsy_1639 FeS cluster assembly scaffold IscU~TIGRFAM: ISC system FeS cluster assembly, IscU scaffold~PFAM: NIF system FeS cluster assembly, NifU, N-terminal inference protein motif:TFAM:TIGR01999 db_xref GO:0005506 db_xref GO:0005515 db_xref GO:0051536 db_xref InterPro:IPR002871 db_xref InterPro:IPR011339 2500175 2500498 gene locus_tag Alide2_2399 2500175 2500498 CDS product iron-sulfur cluster assembly protein IscA transl_table 11 protein_id gb|AEB84763.1||gnl|jgi|Alide2_2399 note KEGG: dia:Dtpsy_1640 iron-sulfur cluster assembly protein IscA~TIGRFAM: ISC system FeS cluster assembly, IscA scaffold; FeS cluster insertion~PFAM: FeS cluster biogenesis inference protein motif:TFAM:TIGR02011 db_xref GO:0005198 db_xref GO:0005506 db_xref GO:0005515 db_xref GO:0051536 db_xref InterPro:IPR000361 db_xref InterPro:IPR011302 db_xref InterPro:IPR016092 2500556 2501074 gene locus_tag Alide2_2400 2500556 2501074 CDS product co-chaperone Hsc20 transl_table 11 protein_id gb|AEB84764.1||gnl|jgi|Alide2_2400 note TIGRFAM: Co-chaperone Hsc20~PFAM: Heat shock cognate protein B, C-terminal oligomerisation; Heat shock protein DnaJ, N-terminal~KEGG: dia:Dtpsy_1641 co-chaperone Hsc20~SMART: Heat shock protein DnaJ, N-terminal inference protein motif:TFAM:TIGR00714 db_xref GO:0051087 db_xref InterPro:IPR001623 db_xref InterPro:IPR004640 db_xref InterPro:IPR009073 2501111 2502979 gene locus_tag Alide2_2401 2501111 2502979 CDS product Fe-S protein assembly chaperone HscA transl_table 11 protein_id gb|AEB84765.1||gnl|jgi|Alide2_2401 note KEGG: dia:Dtpsy_1642 chaperone protein HscA~TIGRFAM: ISC system FeS cluster assembly, HscA chaperone~PFAM: Heat shock protein 70 inference protein motif:TFAM:TIGR01991 db_xref GO:0005524 db_xref GO:0016887 db_xref GO:0051082 db_xref InterPro:IPR010236 db_xref InterPro:IPR013126 2503015 2503353 gene locus_tag Alide2_2402 2503015 2503353 CDS product ferredoxin, 2Fe-2S type, ISC system transl_table 11 protein_id gb|AEB84766.1||gnl|jgi|Alide2_2402 note KEGG: dia:Dtpsy_1643 ferredoxin, 2Fe-2S type, ISC system~TIGRFAM: Ferredoxin, 2Fe-2S type~PFAM: Ferredoxin inference protein motif:TFAM:TIGR02007 db_xref GO:0009055 db_xref InterPro:IPR001041 db_xref InterPro:IPR011536 2503353 2504081 gene locus_tag Alide2_2403 2503353 2504081 CDS product DNA polymerase III, epsilon subunit EC_number 2.7.7.7 transl_table 11 protein_id gb|AEB84767.1||gnl|jgi|Alide2_2403 note SMART: Exonuclease~TIGRFAM: DNA polymerase 3, epsilon subunit; DNA polymerase III, epsilon subunit~KEGG: ajs:Ajs_2138 DNA polymerase III, epsilon subunit~PFAM: Exonuclease, RNase T/DNA polymerase III inference protein motif:TFAM:TIGR01406 db_xref GO:0003677 db_xref GO:0003887 db_xref InterPro:IPR006054 db_xref InterPro:IPR006055 db_xref InterPro:IPR006309 db_xref InterPro:IPR013520 2504108 2504182 gene locus_tag Alide2_R0033 note tRNA-Val2 2504108 2504182 tRNA product tRNA-Val 2504217 2504291 gene locus_tag Alide2_R0034 note tRNA-Val3 2504217 2504291 tRNA product tRNA-Val 2504375 2505487 gene locus_tag Alide2_2404 2504375 2505487 CDS product FAD dependent oxidoreductase transl_table 11 protein_id gb|AEB84768.1||gnl|jgi|Alide2_2404 note PFAM: FAD dependent oxidoreductase~KEGG: ajs:Ajs_2136 FAD dependent oxidoreductase inference protein motif:PFAM:PF01266 db_xref GO:0016491 db_xref InterPro:IPR006076 2505620 2505928 gene locus_tag Alide2_2405 2505620 2505928 CDS product protein of unknown function DUF883 ElaB transl_table 11 protein_id gb|AEB84769.1||gnl|jgi|Alide2_2405 note PFAM: Protein of unknown function DUF883, ElaB~KEGG: dia:Dtpsy_1647 protein of unknown function DUF883 ElaB inference protein motif:PFAM:PF05957 db_xref InterPro:IPR010279 2505953 2506357 gene locus_tag Alide2_2406 2505953 2506357 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84770.1||gnl|jgi|Alide2_2406 note KEGG: dia:Dtpsy_1648 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_1648 db_xref InterPro:IPR009937 2506359 2506658 gene locus_tag Alide2_2407 2506359 2506658 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84771.1||gnl|jgi|Alide2_2407 note KEGG: ajs:Ajs_2133 hypothetical protein inference similar to AA sequence:KEGG:Ajs_2133 2507757 2506711 gene locus_tag Alide2_2408 2507757 2506711 CDS product dihydroorotate dehydrogenase EC_number 1.3.98.1 transl_table 11 protein_id gb|AEB84772.1||gnl|jgi|Alide2_2408 note TIGRFAM: Dihydroorotate dehydrogenase, class 2~KEGG: ajs:Ajs_2132 dihydroorotate dehydrogenase 2~PFAM: Dihydroorotate dehydrogenase, class 1/ 2 inference protein motif:TFAM:TIGR01036 db_xref GO:0004158 db_xref InterPro:IPR005719 db_xref InterPro:IPR012135 2507793 2508482 gene locus_tag Alide2_2409 2507793 2508482 CDS product ribose 5-phosphate isomerase EC_number 5.3.1.6 transl_table 11 protein_id gb|AEB84773.1||gnl|jgi|Alide2_2409 note TIGRFAM: Ribose 5-phosphate isomerase, type A~KEGG: ajs:Ajs_2131 ribose-5-phosphate isomerase A~PFAM: Ribose 5-phosphate isomerase, type A inference protein motif:TFAM:TIGR00021 db_xref GO:0004751 db_xref InterPro:IPR004788 2509120 2508479 gene locus_tag Alide2_2410 2509120 2508479 CDS product glutaredoxin transl_table 11 protein_id gb|AEB84774.1||gnl|jgi|Alide2_2410 note PFAM: Glutaredoxin~KEGG: dia:Dtpsy_1652 glutaredoxin inference protein motif:PFAM:PF00462 db_xref GO:0009055 db_xref GO:0015035 db_xref InterPro:IPR002109 2511275 2509242 gene locus_tag Alide2_2411 2511275 2509242 CDS product Oligopeptidase A EC_number 3.4.24.70 transl_table 11 protein_id gb|AEB84775.1||gnl|jgi|Alide2_2411 note KEGG: ajs:Ajs_2129 oligopeptidase A~PFAM: Peptidase M3A/M3B, thimet/oligopeptidase F inference protein motif:PRIAM:3.4.24.70 db_xref InterPro:IPR001567 2512161 2511313 gene locus_tag Alide2_2412 2512161 2511313 CDS product Methylenetetrahydrofolate dehydrogenase (NADP(+)) EC_number 1.5.1.5 transl_table 11 protein_id gb|AEB84776.1||gnl|jgi|Alide2_2412 note KEGG: dac:Daci_3983 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase~PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain inference protein motif:PRIAM:1.5.1.5 db_xref InterPro:IPR020630 db_xref InterPro:IPR020631 2512870 2512244 gene locus_tag Alide2_2413 2512870 2512244 CDS product two component transcriptional regulator, LuxR family transl_table 11 protein_id gb|AEB84777.1||gnl|jgi|Alide2_2413 note KEGG: ctt:CtCNB1_2245 two component transcriptional regulator, LuxR~PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal~SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal inference protein motif:PFAM:PF00072 db_xref GO:0000156 db_xref GO:0003700 db_xref GO:0043565 db_xref InterPro:IPR000792 db_xref InterPro:IPR001789 2515419 2512867 gene locus_tag Alide2_2414 2515419 2512867 CDS product multi-sensor signal transduction histidine kinase transl_table 11 protein_id gb|AEB84778.1||gnl|jgi|Alide2_2414 note TIGRFAM: PAS~PFAM: ATPase-like, ATP-binding domain; PAS fold; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain~KEGG: dia:Dtpsy_1656 PAS/PAC sensor signal transduction histidine kinase~SMART: ATPase-like, ATP-binding domain; PAS; PAC motif; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain inference protein motif:TFAM:TIGR00229 db_xref GO:0004871 db_xref InterPro:IPR000014 db_xref InterPro:IPR001610 db_xref InterPro:IPR003594 db_xref InterPro:IPR003661 db_xref InterPro:IPR013767 2515616 2518312 gene locus_tag Alide2_2415 2515616 2518312 CDS product 2-oxo-acid dehydrogenase E1 subunit, homodimeric type EC_number 1.2.4.1 transl_table 11 protein_id gb|AEB84779.1||gnl|jgi|Alide2_2415 note TIGRFAM: 2-oxo-acid dehydrogenase E1 component homodimeric type~KEGG: dia:Dtpsy_1657 pyruvate dehydrogenase subunit E1~PFAM: Transketolase, N-terminal inference protein motif:TFAM:TIGR00759 db_xref GO:0016491 db_xref InterPro:IPR004660 db_xref InterPro:IPR005474 2518331 2519980 gene locus_tag Alide2_2416 2518331 2519980 CDS product pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase EC_number 2.3.1.12 transl_table 11 protein_id gb|AEB84780.1||gnl|jgi|Alide2_2416 note TIGRFAM: Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex~KEGG: dia:Dtpsy_1658 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase~PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding inference protein motif:TFAM:TIGR01348 db_xref GO:0004742 db_xref InterPro:IPR000089 db_xref InterPro:IPR001078 db_xref InterPro:IPR004167 db_xref InterPro:IPR006256 2519994 2521823 gene locus_tag Alide2_2417 2519994 2521823 CDS product dihydrolipoamide dehydrogenase transl_table 11 protein_id gb|AEB84781.1||gnl|jgi|Alide2_2417 note KEGG: dia:Dtpsy_1659 dihydrolipoamide dehydrogenase~TIGRFAM: Dihydrolipoamide dehydrogenase~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Biotin/lipoyl attachment; Pyridine nucleotide-disulphide oxidoreductase, dimerisation inference protein motif:TFAM:TIGR01350 db_xref GO:0004148 db_xref GO:0050660 db_xref InterPro:IPR000089 db_xref InterPro:IPR004099 db_xref InterPro:IPR006258 db_xref InterPro:IPR013027 2521975 2522256 gene locus_tag Alide2_2418 2521975 2522256 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84782.1||gnl|jgi|Alide2_2418 inference ab initio prediction:Prodigal:1.4 2522246 2522620 gene locus_tag Alide2_2419 2522246 2522620 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84783.1||gnl|jgi|Alide2_2419 inference ab initio prediction:Prodigal:1.4 2523121 2524089 gene locus_tag Alide2_2420 2523121 2524089 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84784.1||gnl|jgi|Alide2_2420 note KEGG: aav:Aave_2466 hypothetical protein inference similar to AA sequence:KEGG:Aave_2466 db_xref InterPro:IPR005064 2524156 2525586 gene locus_tag Alide2_2421 2524156 2525586 CDS product filamentation induced by cAMP protein Fic transl_table 11 protein_id gb|AEB84785.1||gnl|jgi|Alide2_2421 note PFAM: Filamentation induced by cAMP/death on curing-related~KEGG: pna:Pnap_3558 filamentation induced by cAMP protein Fic inference protein motif:PFAM:PF02661 db_xref InterPro:IPR003812 2525645 2526343 gene locus_tag Alide2_2422 2525645 2526343 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB84786.1||gnl|jgi|Alide2_2422 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: dia:Dtpsy_1341 transcriptional regulator, LysR family inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 2526383 2526562 gene locus_tag Alide2_2423 2526383 2526562 CDS product transposase Tn3 transl_table 11 protein_id gb|AEB84787.1||gnl|jgi|Alide2_2423 note KEGG: ajs:Ajs_1877 transposase Tn3 inference similar to AA sequence:KEGG:Ajs_1877 2527029 2526568 gene locus_tag Alide2_2424 pseudo 2527079 2527505 gene locus_tag Alide2_2425 pseudo 2527502 2527924 gene locus_tag Alide2_2426 2527502 2527924 CDS product IS66 Orf2 family protein transl_table 11 protein_id gb|AEB84788.1||gnl|jgi|Alide2_2426 note PFAM: Transposase (putative), IS66 Orf2-like~KEGG: rfr:Rfer_2710 IS66 Orf2 like inference protein motif:PFAM:PF05717 db_xref InterPro:IPR008878 2527918 2529432 gene locus_tag Alide2_2427 2527918 2529432 CDS product transposase IS66 transl_table 11 protein_id gb|AEB84789.1||gnl|jgi|Alide2_2427 note PFAM: Transposase, IS66~KEGG: dia:Dtpsy_2523 transposase IS66 inference protein motif:PFAM:PF03050 db_xref InterPro:IPR004291 2529874 2529485 gene locus_tag Alide2_2428 pseudo 2530158 2529892 gene locus_tag Alide2_2429 2530158 2529892 CDS product transposase IS3/IS911 family protein transl_table 11 protein_id gb|AEB84790.1||gnl|jgi|Alide2_2429 note PFAM: Transposase IS3/IS911family~KEGG: ctt:CtCNB1_1899 transposase IS3/IS911 inference protein motif:PFAM:PF01527 db_xref GO:0003677 db_xref GO:0004803 db_xref InterPro:IPR002514 2530198 2530440 gene locus_tag Alide2_2430 pseudo 2530458 2531447 gene locus_tag Alide2_2431 2530458 2531447 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84791.1||gnl|jgi|Alide2_2431 note KEGG: reu:Reut_B3949 hypothetical protein inference similar to AA sequence:KEGG:Reut_B3949 db_xref InterPro:IPR005064 db_xref InterPro:IPR006311 2531565 2532506 gene locus_tag Alide2_2432 2531565 2532506 CDS product S-adenosylmethionine-dependent methyltransferase transl_table 11 protein_id gb|AEB84792.1||gnl|jgi|Alide2_2432 note PFAM: S-adenosylmethionine-dependent methyltransferase~KEGG: dia:Dtpsy_1661 hypothetical protein inference protein motif:PFAM:PF10672 db_xref InterPro:IPR019614 2533069 2532636 gene locus_tag Alide2_2433 pseudo 2533166 2534050 gene locus_tag Alide2_2434 2533166 2534050 CDS product 2-hydroxy-3-oxopropionate reductase EC_number 1.1.1.60 transl_table 11 protein_id gb|AEB84793.1||gnl|jgi|Alide2_2434 note KEGG: ajs:Ajs_2093 6-phosphogluconate dehydrogenase, NAD-binding~PFAM: 6-phosphogluconate dehydrogenase, NAD-binding inference protein motif:PRIAM:1.1.1.60 db_xref InterPro:IPR006115 2534716 2534054 gene locus_tag Alide2_2435 2534716 2534054 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84794.1||gnl|jgi|Alide2_2435 note KEGG: ade:Adeh_1681 PE-PGRS family protein inference similar to AA sequence:KEGG:Adeh_1681 2535247 2534741 gene locus_tag Alide2_2436 2535247 2534741 CDS product Uncharacterized protein family UPF0310 transl_table 11 protein_id gb|AEB84795.1||gnl|jgi|Alide2_2436 note PFAM: Protein of unknown function DUF55~KEGG: aav:Aave_2834 hypothetical protein inference protein motif:PFAM:PF01878 db_xref InterPro:IPR002740 2535495 2535244 gene locus_tag Alide2_2437 2535495 2535244 CDS product Transglycosylase-associated protein transl_table 11 protein_id gb|AEB84796.1||gnl|jgi|Alide2_2437 note PFAM: Transglycosylase-associated protein~KEGG: aav:Aave_2831 transglycosylase-associated protein inference protein motif:PFAM:PF04226 db_xref InterPro:IPR007341 2536243 2535671 gene locus_tag Alide2_2438 2536243 2535671 CDS product NLP/P60 protein transl_table 11 protein_id gb|AEB84797.1||gnl|jgi|Alide2_2438 note KEGG: ajs:Ajs_2091 NLP/P60 protein~manually curated~PFAM: NLP/P60 inference protein motif:PFAM:PF00877 db_xref InterPro:IPR000064 2536539 2537963 gene locus_tag Alide2_2439 2536539 2537963 CDS product amino acid permease-associated region transl_table 11 protein_id gb|AEB84798.1||gnl|jgi|Alide2_2439 note PFAM: Amino acid permease domain~KEGG: dac:Daci_3739 D-alanine/D-serine/glycine permease inference protein motif:PFAM:PF00324 db_xref InterPro:IPR004841 2538064 2539482 gene locus_tag Alide2_2440 2538064 2539482 CDS product drug resistance transporter, EmrB/QacA subfamily transl_table 11 protein_id gb|AEB84799.1||gnl|jgi|Alide2_2440 note KEGG: dia:Dtpsy_1665 drug resistance transporter, EmrB/QacA subfamily~TIGRFAM: Drug resistance transporter EmrB/QacA subfamily~PFAM: Major facilitator superfamily MFS-1 inference protein motif:TFAM:TIGR00711 db_xref InterPro:IPR004638 db_xref InterPro:IPR011701 2539679 2542843 gene locus_tag Alide2_2441 2539679 2542843 CDS product diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(s) transl_table 11 protein_id gb|AEB84800.1||gnl|jgi|Alide2_2441 note TIGRFAM: Diguanylate cyclase, predicted; PAS~PFAM: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; CHASE; PAS fold~KEGG: dia:Dtpsy_1667 diguanylate cyclase/phosphodiesterase with PAS/PAC and CHASE sensor(s)~SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS; PAC motif inference protein motif:TFAM:TIGR00254 db_xref GO:0004871 db_xref InterPro:IPR000014 db_xref InterPro:IPR000160 db_xref InterPro:IPR001610 db_xref InterPro:IPR001633 db_xref InterPro:IPR006189 db_xref InterPro:IPR013767 2542858 2543187 gene locus_tag Alide2_2442 2542858 2543187 CDS product protein of unknown function UPF0060 transl_table 11 protein_id gb|AEB84801.1||gnl|jgi|Alide2_2442 note PFAM: Uncharacterised protein family UPF0060~KEGG: ajs:Ajs_2087 hypothetical protein inference protein motif:PFAM:PF02694 db_xref InterPro:IPR003844 2544001 2543342 gene locus_tag Alide2_2443 2544001 2543342 CDS product PEP motif putative anchor domain protein transl_table 11 protein_id gb|AEB84802.1||gnl|jgi|Alide2_2443 note KEGG: nar:Saro_2119 hypothetical protein~TIGRFAM: PEP-CTERM anchor~PFAM: PEP-CTERM bacterial inference protein motif:TFAM:TIGR02595 db_xref InterPro:IPR011449 db_xref InterPro:IPR013424 2544270 2547794 gene locus_tag Alide2_2444 2544270 2547794 CDS product chromosome segregation protein SMC transl_table 11 protein_id gb|AEB84803.1||gnl|jgi|Alide2_2444 note TIGRFAM: Chromosome segregation protein SMC~PFAM: RecF/RecN/SMC~KEGG: dia:Dtpsy_1669 chromosome segregation protein SMC~SMART: SMCs flexible hinge inference protein motif:TFAM:TIGR02168 db_xref GO:0005515 db_xref GO:0005524 db_xref InterPro:IPR003395 db_xref InterPro:IPR010935 db_xref InterPro:IPR011890 2547805 2548899 gene locus_tag Alide2_2445 2547805 2548899 CDS product ZipA FtsZ-binding region protein transl_table 11 protein_id gb|AEB84804.1||gnl|jgi|Alide2_2445 note SMART: ZipA, C-terminal FtsZ-binding domain~KEGG: dia:Dtpsy_1670 ZipA FtsZ-binding region inference protein motif:SMART:SM00771 db_xref GO:0005515 db_xref InterPro:IPR007449 2548911 2551064 gene locus_tag Alide2_2446 2548911 2551064 CDS product DNA ligase, NAD-dependent EC_number 6.5.1.2 transl_table 11 protein_id gb|AEB84805.1||gnl|jgi|Alide2_2446 note SMART: NAD-dependent DNA ligase, N-terminal; Helix-hairpin-helix DNA-binding motif, class 1; BRCT~TIGRFAM: NAD-dependent DNA ligase~KEGG: ajs:Ajs_2083 DNA ligase, NAD-dependent~PFAM: NAD-dependent DNA ligase, adenylation; Zinc-finger, NAD-dependent DNA ligase C4-type; BRCT; NAD-dependent DNA ligase, OB-fold inference protein motif:TFAM:TIGR00575 db_xref GO:0003911 db_xref InterPro:IPR001357 db_xref InterPro:IPR001679 db_xref InterPro:IPR003583 db_xref InterPro:IPR004149 db_xref InterPro:IPR004150 db_xref InterPro:IPR013839 db_xref InterPro:IPR013840 2551068 2552003 gene locus_tag Alide2_2447 2551068 2552003 CDS product Patatin transl_table 11 protein_id gb|AEB84806.1||gnl|jgi|Alide2_2447 note PFAM: Patatin/Phospholipase A2-related~KEGG: ajs:Ajs_2082 patatin inference protein motif:PFAM:PF01734 db_xref InterPro:IPR002641 2552191 2554674 gene locus_tag Alide2_2448 2552191 2554674 CDS product Peptidoglycan glycosyltransferase EC_number 2.4.1.129 transl_table 11 protein_id gb|AEB84807.1||gnl|jgi|Alide2_2448 note KEGG: ajs:Ajs_2081 glycosyl transferase family protein~PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase inference protein motif:PRIAM:2.4.1.129 db_xref InterPro:IPR001264 db_xref InterPro:IPR001460 2554685 2555881 gene locus_tag Alide2_2449 2554685 2555881 CDS product major facilitator superfamily MFS_1 transl_table 11 protein_id gb|AEB84808.1||gnl|jgi|Alide2_2449 note PFAM: Major facilitator superfamily MFS-1~KEGG: dia:Dtpsy_1675 major facilitator superfamily MFS_1 inference protein motif:PFAM:PF07690 db_xref InterPro:IPR011701 2556422 2555874 gene locus_tag Alide2_2450 2556422 2555874 CDS product NUDIX hydrolase transl_table 11 protein_id gb|AEB84809.1||gnl|jgi|Alide2_2450 note PFAM: NUDIX hydrolase domain~KEGG: dia:Dtpsy_1676 NUDIX hydrolase inference protein motif:PFAM:PF00293 db_xref GO:0016787 db_xref InterPro:IPR000086 2557185 2556490 gene locus_tag Alide2_2451 2557185 2556490 CDS product fumarylacetoacetate (FAA) hydrolase transl_table 11 protein_id gb|AEB84810.1||gnl|jgi|Alide2_2451 note PFAM: Fumarylacetoacetase, C-terminal-like~KEGG: dia:Dtpsy_1677 fumarylacetoacetate (FAA) hydrolase inference protein motif:PFAM:PF01557 db_xref GO:0003824 db_xref InterPro:IPR002529 2557299 2557964 gene locus_tag Alide2_2452 2557299 2557964 CDS product maleylacetoacetate isomerase EC_number 5.2.1.2 transl_table 11 protein_id gb|AEB84811.1||gnl|jgi|Alide2_2452 note TIGRFAM: Maleylacetoacetate isomerase~KEGG: dia:Dtpsy_1678 maleylacetoacetate isomerase~PFAM: Glutathione S-transferase, N-terminal inference protein motif:TFAM:TIGR01262 db_xref GO:0003824 db_xref InterPro:IPR004045 db_xref InterPro:IPR005955 2557957 2558805 gene locus_tag Alide2_2453 2557957 2558805 CDS product Multi-copper polyphenol oxidoreductase, laccase transl_table 11 protein_id gb|AEB84812.1||gnl|jgi|Alide2_2453 note KEGG: dia:Dtpsy_1679 protein of unknown function DUF152~TIGRFAM: Multi-copper polyphenol oxidoreductase, laccase~PFAM: Multi-copper polyphenol oxidoreductase, laccase inference protein motif:TFAM:TIGR00726 db_xref InterPro:IPR003730 2559015 2558725 gene locus_tag Alide2_2454 2559015 2558725 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84813.1||gnl|jgi|Alide2_2454 note KEGG: dia:Dtpsy_1680 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_1680 2559166 2560875 gene locus_tag Alide2_2455 2559166 2560875 CDS product poly(R)-hydroxyalkanoic acid synthase, class I transl_table 11 protein_id gb|AEB84814.1||gnl|jgi|Alide2_2455 note KEGG: dia:Dtpsy_1681 poly(R)-hydroxyalkanoic acid synthase, class I~TIGRFAM: Poly(R)-hydroxyalkanoic acid synthase, class I~PFAM: Poly-beta-hydroxybutyrate polymerase, N-terminal; Alpha/beta hydrolase fold-1 inference protein motif:TFAM:TIGR01838 db_xref GO:0008415 db_xref InterPro:IPR000073 db_xref InterPro:IPR010941 db_xref InterPro:IPR010963 2560955 2562133 gene locus_tag Alide2_2456 2560955 2562133 CDS product acetyl-CoA acetyltransferase EC_number 2.3.1.9 transl_table 11 protein_id gb|AEB84815.1||gnl|jgi|Alide2_2456 note TIGRFAM: Thiolase~KEGG: ajs:Ajs_2073 acetyl-CoA acetyltransferase~PFAM: Thiolase, N-terminal; Thiolase, C-terminal inference protein motif:TFAM:TIGR01930 db_xref GO:0008415 db_xref InterPro:IPR002155 db_xref InterPro:IPR020616 db_xref InterPro:IPR020617 2562293 2563030 gene locus_tag Alide2_2457 2562293 2563030 CDS product acetoacetyl-CoA reductase EC_number 1.1.1.36 transl_table 11 protein_id gb|AEB84816.1||gnl|jgi|Alide2_2457 note TIGRFAM: Acetoacetyl-CoA reductase~KEGG: ajs:Ajs_2072 3-ketoacyl-(acyl-carrier-protein) reductase~PFAM: Short-chain dehydrogenase/reductase SDR inference protein motif:TFAM:TIGR01829 db_xref GO:0018454 db_xref InterPro:IPR002198 db_xref InterPro:IPR011283 2565387 2563459 gene locus_tag Alide2_2458 2565387 2563459 CDS product ABC transporter related protein transl_table 11 protein_id gb|AEB84817.1||gnl|jgi|Alide2_2458 note KEGG: ajs:Ajs_2071 ABC transporter related~PFAM: ABC transporter-like~SMART: ATPase, AAA+ type, core inference protein motif:PFAM:PF00005 db_xref GO:0005524 db_xref GO:0016887 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 2566429 2565443 gene locus_tag Alide2_2459 2566429 2565443 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84818.1||gnl|jgi|Alide2_2459 note KEGG: dac:Daci_3609 hypothetical protein inference similar to AA sequence:KEGG:Daci_3609 db_xref InterPro:IPR005064 db_xref InterPro:IPR006311 2567716 2566487 gene locus_tag Alide2_2460 2567716 2566487 CDS product Butyryl-CoA dehydrogenase EC_number 1.3.8.1 transl_table 11 protein_id gb|AEB84819.1||gnl|jgi|Alide2_2460 note KEGG: dac:Daci_3610 acyl-CoA dehydrogenase domain-containing protein~PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal inference protein motif:PRIAM:1.3.99.2 db_xref InterPro:IPR006090 db_xref InterPro:IPR006091 db_xref InterPro:IPR006092 2569298 2567718 gene locus_tag Alide2_2461 2569298 2567718 CDS product o-succinylbenzoate--CoA ligase EC_number 6.2.1.26 transl_table 11 protein_id gb|AEB84820.1||gnl|jgi|Alide2_2461 note KEGG: dac:Daci_3611 AMP-dependent synthetase/ligase~PFAM: AMP-dependent synthetase/ligase inference protein motif:PRIAM:6.2.1.26 db_xref InterPro:IPR000873 2570407 2569403 gene locus_tag Alide2_2462 2570407 2569403 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB84821.1||gnl|jgi|Alide2_2462 note PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding~KEGG: dac:Daci_3612 LysR family transcriptional regulator inference protein motif:PFAM:PF00126 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 2571332 2570409 gene locus_tag Alide2_2463 2571332 2570409 CDS product protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific EC_number 2.1.1.72 transl_table 11 protein_id gb|AEB84822.1||gnl|jgi|Alide2_2463 note TIGRFAM: Ribosomal protein L3-specific, glutamine-N5-methyltransferase; Modification methylase HemK~KEGG: ajs:Ajs_2070 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase~PFAM: Methyltransferase small inference protein motif:TFAM:TIGR03533 db_xref GO:0008276 db_xref GO:0009007 db_xref InterPro:IPR004556 db_xref InterPro:IPR007848 db_xref InterPro:IPR017127 2572507 2571329 gene locus_tag Alide2_2464 2572507 2571329 CDS product succinyl-diaminopimelate desuccinylase transl_table 11 protein_id gb|AEB84823.1||gnl|jgi|Alide2_2464 note KEGG: ajs:Ajs_2069 succinyl-diaminopimelate desuccinylase~TIGRFAM: Succinyl-diaminopimelate desuccinylase, proteobacteria~PFAM: Peptidase M20; Peptidase M20, dimerisation inference protein motif:TFAM:TIGR01246 db_xref GO:0009014 db_xref InterPro:IPR002933 db_xref InterPro:IPR005941 db_xref InterPro:IPR011650 2573694 2572531 gene locus_tag Alide2_2465 2573694 2572531 CDS product twitching motility protein transl_table 11 protein_id gb|AEB84824.1||gnl|jgi|Alide2_2465 note TIGRFAM: Pilus retraction protein PilT~PFAM: Type II secretion system protein E~KEGG: dia:Dtpsy_1891 twitching motility protein~SMART: ATPase, AAA+ type, core inference protein motif:TFAM:TIGR01420 db_xref GO:0005524 db_xref InterPro:IPR001482 db_xref InterPro:IPR003593 db_xref InterPro:IPR006321 2574581 2573757 gene locus_tag Alide2_2466 2574581 2573757 CDS product 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase EC_number 2.3.1.117 transl_table 11 protein_id gb|AEB84825.1||gnl|jgi|Alide2_2466 note KEGG: dia:Dtpsy_1890 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase~TIGRFAM: 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase inference protein motif:TFAM:TIGR00965 db_xref GO:0008666 db_xref InterPro:IPR005664 2575791 2574589 gene locus_tag Alide2_2467 2575791 2574589 CDS product succinyldiaminopimelate transaminase EC_number 2.6.1.83 transl_table 11 protein_id gb|AEB84826.1||gnl|jgi|Alide2_2467 note TIGRFAM: Succinyldiaminopimelate transaminase, beta/gammaproteobacteria~KEGG: dia:Dtpsy_1889 succinyldiaminopimelate transaminase~PFAM: Aminotransferase, class I/classII inference protein motif:TFAM:TIGR03538 db_xref InterPro:IPR004839 db_xref InterPro:IPR019878 2576566 2575883 gene locus_tag Alide2_2468 2576566 2575883 CDS product electron transport complex, RnfABCDGE type, B subunit transl_table 11 protein_id gb|AEB84827.1||gnl|jgi|Alide2_2468 note KEGG: dia:Dtpsy_1887 electron transport complex, RnfABCDGE type, B subunit~TIGRFAM: Electron transport complex, RnfB~PFAM: Putative Fe-S cluster; 4Fe-4S binding domain inference protein motif:TFAM:TIGR01944 db_xref GO:0009055 db_xref GO:0051536 db_xref InterPro:IPR001450 db_xref InterPro:IPR007202 db_xref InterPro:IPR010207 2577898 2576582 gene locus_tag Alide2_2469 2577898 2576582 CDS product polyhydroxyalkanoate depolymerase, intracellular transl_table 11 protein_id gb|AEB84828.1||gnl|jgi|Alide2_2469 note KEGG: ajs:Ajs_2063 polyhydroxyalkanoate depolymerase, intracellular~TIGRFAM: Polyhydroxyalkanoate depolymerase~PFAM: PHB de-polymerase, C-terminal inference protein motif:TFAM:TIGR01849 db_xref InterPro:IPR009656 db_xref InterPro:IPR010915 2579132 2578074 gene locus_tag Alide2_2470 2579132 2578074 CDS product RelA/SpoT domain protein transl_table 11 protein_id gb|AEB84829.1||gnl|jgi|Alide2_2470 note KEGG: dia:Dtpsy_1885 RelA/SpoT domain protein~PFAM: RelA/SpoT~SMART: RelA/SpoT inference protein motif:PFAM:PF04607 db_xref InterPro:IPR007685 2580149 2579199 gene locus_tag Alide2_2471 2580149 2579199 CDS product TIM-barrel protein, yjbN family transl_table 11 protein_id gb|AEB84830.1||gnl|jgi|Alide2_2471 note KEGG: dia:Dtpsy_1883 tRNA-dihydrouridine synthase A~TIGRFAM: tRNA-dihydrouridine synthase, TIM-barrel, YjbN~PFAM: tRNA-dihydrouridine synthase inference protein motif:TFAM:TIGR00742 db_xref GO:0016491 db_xref GO:0050660 db_xref InterPro:IPR001269 db_xref InterPro:IPR004653 2580434 2580895 gene locus_tag Alide2_2472 2580434 2580895 CDS product MaoC domain protein dehydratase transl_table 11 protein_id gb|AEB84831.1||gnl|jgi|Alide2_2472 note PFAM: MaoC-like dehydratase~KEGG: pde:Pden_4680 dehydratase inference protein motif:PFAM:PF01575 db_xref GO:0016491 db_xref InterPro:IPR002539 2580899 2581507 gene locus_tag Alide2_2473 2580899 2581507 CDS product regulatory protein TetR transl_table 11 protein_id gb|AEB84832.1||gnl|jgi|Alide2_2473 note PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal~KEGG: pde:Pden_4681 TetR family transcriptional regulator inference protein motif:PFAM:PF00440 db_xref GO:0003700 db_xref InterPro:IPR001647 2581696 2582820 gene locus_tag Alide2_2474 2581696 2582820 CDS product Saccharopine dehydrogenase transl_table 11 protein_id gb|AEB84833.1||gnl|jgi|Alide2_2474 note PFAM: Saccharopine dehydrogenase / Homospermidine synthase~KEGG: dia:Dtpsy_1846 saccharopine dehydrogenase inference protein motif:PFAM:PF03435 db_xref InterPro:IPR005097 2584652 2582817 gene locus_tag Alide2_2475 2584652 2582817 CDS product Long-chain-fatty-acid--CoA ligase EC_number 6.2.1.3 transl_table 11 protein_id gb|AEB84834.1||gnl|jgi|Alide2_2475 note KEGG: dia:Dtpsy_1847 AMP-dependent synthetase and ligase~PFAM: AMP-dependent synthetase/ligase inference protein motif:PRIAM:6.2.1.3 db_xref InterPro:IPR000873 2585414 2584779 gene locus_tag Alide2_2476 2585414 2584779 CDS product transcriptional regulator, GntR family transl_table 11 protein_id gb|AEB84835.1||gnl|jgi|Alide2_2476 note KEGG: dia:Dtpsy_1848 transcriptional regulator, GntR family~PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR~SMART: GntR, C-terminal; HTH transcriptional regulator, GntR inference protein motif:PFAM:PF07729 db_xref GO:0003700 db_xref InterPro:IPR000524 db_xref InterPro:IPR011711 2586360 2585428 gene locus_tag Alide2_2477 2586360 2585428 CDS product Hydroxymethylglutaryl-CoA lyase EC_number 4.1.3.4 transl_table 11 protein_id gb|AEB84836.1||gnl|jgi|Alide2_2477 note KEGG: axy:AXYL_01256 3-hydroxy-3-methylglutaryl-CoA lyase 1~PFAM: Pyruvate carboxyltransferase inference protein motif:PRIAM:4.1.3.4 db_xref InterPro:IPR000891 2587328 2586363 gene locus_tag Alide2_2478 2587328 2586363 CDS product extra-cytoplasmic solute receptor family protein 24 transl_table 11 protein_id gb|AEB84837.1||gnl|jgi|Alide2_2478 note KEGG: axy:AXYL_01255 extra-cytoplasmic solute receptor family protein 24 inference similar to AA sequence:KEGG:AXYL_01255 db_xref InterPro:IPR005064 2588589 2587366 gene locus_tag Alide2_2479 2588589 2587366 CDS product Formyl-CoA transferase EC_number 2.8.3.16 transl_table 11 protein_id gb|AEB84838.1||gnl|jgi|Alide2_2479 note KEGG: axy:AXYL_01254 CoA-transferase family III family protein 9~PFAM: CoA-transferase family III inference protein motif:PRIAM:2.8.3.16 db_xref InterPro:IPR003673 2590129 2588693 gene locus_tag Alide2_2480 2590129 2588693 CDS product transcriptional regulator, XRE family transl_table 11 protein_id gb|AEB84839.1||gnl|jgi|Alide2_2480 note KEGG: rpt:Rpal_2644 transcriptional regulator, XRE family~PFAM: Protein of unknown function DUF2083,transcriptional regulator; Helix-turn-helix type 3; Protein of unknown function DUF955~SMART: Helix-turn-helix type 3 inference protein motif:PFAM:PF09856 db_xref GO:0043565 db_xref InterPro:IPR001387 db_xref InterPro:IPR010359 db_xref InterPro:IPR018653 2590260 2592401 gene locus_tag Alide2_2481 2590260 2592401 CDS product methylmalonyl-CoA mutase, large subunit EC_number 5.4.99.2 transl_table 11 protein_id gb|AEB84840.1||gnl|jgi|Alide2_2481 note TIGRFAM: Methylmalonyl-CoA mutase, alpha chain, catalytic; Methylmalonyl-CoA mutase, C-terminal~KEGG: dia:Dtpsy_1849 methylmalonyl-CoA mutase~PFAM: Methylmalonyl-CoA mutase, alpha/beta chain, catalytic; Cobalamin (vitamin B12)-binding inference protein motif:TFAM:TIGR00641 db_xref GO:0004494 db_xref GO:0016853 db_xref GO:0031419 db_xref InterPro:IPR006098 db_xref InterPro:IPR006099 db_xref InterPro:IPR006158 db_xref InterPro:IPR006159 2592418 2593425 gene locus_tag Alide2_2482 2592418 2593425 CDS product LAO/AO transport system ATPase transl_table 11 protein_id gb|AEB84841.1||gnl|jgi|Alide2_2482 note KEGG: xtr:100495832 uncharacterized protein CC_2483-like~TIGRFAM: ArgK protein~PFAM: ArgK protein inference protein motif:TFAM:TIGR00750 db_xref InterPro:IPR005129 2593482 2595014 gene locus_tag Alide2_2483 2593482 2595014 CDS product Propionyl-CoA carboxylase EC_number 6.4.1.3 transl_table 11 protein_id gb|AEB84842.1||gnl|jgi|Alide2_2483 note KEGG: ajs:Ajs_2042 carboxyl transferase~PFAM: Carboxyl transferase inference protein motif:PRIAM:6.4.1.3 db_xref InterPro:IPR000022 2595172 2597220 gene locus_tag Alide2_2484 2595172 2597220 CDS product acetyl-CoA carboxylase, biotin carboxylase EC_number 6.4.1.3 transl_table 11 protein_id gb|AEB84843.1||gnl|jgi|Alide2_2484 note SMART: Biotin carboxylase, C-terminal~TIGRFAM: Acetyl-CoA carboxylase, biotin carboxylase~KEGG: dia:Dtpsy_1853 carbamoyl-phosphate synthase L chain ATP-binding~PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Carbamoyl-phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; Biotin/lipoyl attachment inference protein motif:TFAM:TIGR00514 db_xref GO:0016874 db_xref InterPro:IPR000089 db_xref InterPro:IPR004549 db_xref InterPro:IPR005479 db_xref InterPro:IPR005481 db_xref InterPro:IPR005482 2597279 2597740 gene locus_tag Alide2_2485 2597279 2597740 CDS product lactoylglutathione lyase transl_table 11 protein_id gb|AEB84844.1||gnl|jgi|Alide2_2485 note KEGG: dia:Dtpsy_1854 lactoylglutathione lyase inference similar to AA sequence:KEGG:Dtpsy_1854 2598107 2599180 gene locus_tag Alide2_2486 2598107 2599180 CDS product Biotin synthase EC_number 2.8.1.6 transl_table 11 protein_id gb|AEB84845.1||gnl|jgi|Alide2_2486 note KEGG: ajs:Ajs_2045 biotin synthase~PFAM: Biotin/thiamin synthesis-associated protein; Radical SAM~TIGRFAM: Biotin synthase~HAMAP: Biotin synthase~SMART: Biotin/thiamin synthesis-associated protein; Elongator protein 3/MiaB/NifB inference protein motif:HAMAP:MF_01694 db_xref InterPro:IPR002684 db_xref InterPro:IPR006638 db_xref InterPro:IPR007197 db_xref InterPro:IPR010722 2600271 2599264 gene locus_tag Alide2_2487 2600271 2599264 CDS product twin-arginine translocation pathway signal transl_table 11 protein_id gb|AEB84846.1||gnl|jgi|Alide2_2487 note KEGG: pol:Bpro_1449 twin-arginine translocation pathway signal inference similar to AA sequence:KEGG:Bpro_1449 db_xref InterPro:IPR005064 db_xref InterPro:IPR006311 2600393 2601073 gene locus_tag Alide2_2488 2600393 2601073 CDS product two component transcriptional regulator, winged helix family transl_table 11 protein_id gb|AEB84847.1||gnl|jgi|Alide2_2488 note KEGG: pol:Bpro_1450 two component transcriptional regulator~PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal~SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal inference protein motif:PFAM:PF00072 db_xref GO:0000156 db_xref GO:0003677 db_xref InterPro:IPR001789 db_xref InterPro:IPR001867 2601039 2602427 gene locus_tag Alide2_2489 2601039 2602427 CDS product integral membrane sensor signal transduction histidine kinase transl_table 11 protein_id gb|AEB84848.1||gnl|jgi|Alide2_2489 note KEGG: pol:Bpro_1451 histidine kinase~PFAM: Two-component sensor kinase N-terminal; ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain~SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain inference protein motif:PFAM:PF08521 db_xref GO:0000155 db_xref GO:0005524 db_xref InterPro:IPR003594 db_xref InterPro:IPR003661 db_xref InterPro:IPR013727 2602424 2603395 gene locus_tag Alide2_2490 2602424 2603395 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84849.1||gnl|jgi|Alide2_2490 note KEGG: pol:Bpro_1452 hypothetical protein inference similar to AA sequence:KEGG:Bpro_1452 db_xref InterPro:IPR005064 2603845 2603399 gene locus_tag Alide2_2491 2603845 2603399 CDS product OsmC family protein transl_table 11 protein_id gb|AEB84850.1||gnl|jgi|Alide2_2491 note PFAM: Peroxiredoxin, OsmC-like protein~KEGG: pna:Pnap_2833 OsmC family protein inference protein motif:PFAM:PF02566 db_xref InterPro:IPR003718 2604135 2603842 gene locus_tag Alide2_2492 2604135 2603842 CDS product Rhodanese-like protein transl_table 11 protein_id gb|AEB84851.1||gnl|jgi|Alide2_2492 note KEGG: pna:Pnap_2832 rhodanese domain-containing protein~PFAM: Rhodanese-like~SMART: Rhodanese-like inference protein motif:PFAM:PF00581 db_xref InterPro:IPR001763 2604442 2604233 gene locus_tag Alide2_2493 2604442 2604233 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84852.1||gnl|jgi|Alide2_2493 note KEGG: pna:Pnap_2829 hypothetical protein inference similar to AA sequence:KEGG:Pnap_2829 2605612 2604476 gene locus_tag Alide2_2494 2605612 2604476 CDS product FAD-dependent pyridine nucleotide-disulfide oxidoreductase transl_table 11 protein_id gb|AEB84853.1||gnl|jgi|Alide2_2494 note PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase~KEGG: alv:Alvin_1195 FAD-dependent pyridine nucleotide-disulphide oxidoreductase inference protein motif:PFAM:PF07992 db_xref InterPro:IPR013027 2606901 2605609 gene locus_tag Alide2_2495 2606901 2605609 CDS product FAD-dependent pyridine nucleotide-disulfide oxidoreductase transl_table 11 protein_id gb|AEB84854.1||gnl|jgi|Alide2_2495 note PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase~KEGG: pna:Pnap_2831 FAD-dependent pyridine nucleotide-disulphide oxidoreductase inference protein motif:PFAM:PF07992 db_xref InterPro:IPR013027 2608365 2606944 gene locus_tag Alide2_2496 2608365 2606944 CDS product outer membrane efflux protein transl_table 11 protein_id gb|AEB84855.1||gnl|jgi|Alide2_2496 note PFAM: Outer membrane efflux protein~KEGG: pna:Pnap_2830 TolC family type I secretion outer membrane protein inference protein motif:PFAM:PF02321 db_xref GO:0005215 db_xref InterPro:IPR003423 2611595 2608362 gene locus_tag Alide2_2497 2611595 2608362 CDS product acriflavin resistance protein transl_table 11 protein_id gb|AEB84856.1||gnl|jgi|Alide2_2497 note PFAM: Acriflavin resistance protein~KEGG: pna:Pnap_2828 acriflavin resistance protein inference protein motif:PFAM:PF00873 db_xref GO:0005215 db_xref InterPro:IPR001036 2612637 2611597 gene locus_tag Alide2_2498 2612637 2611597 CDS product efflux transporter, RND family, MFP subunit transl_table 11 protein_id gb|AEB84857.1||gnl|jgi|Alide2_2498 note KEGG: pna:Pnap_2827 RND family efflux transporter MFP subunit~TIGRFAM: Secretion protein HlyD~PFAM: Secretion protein HlyD inference protein motif:TFAM:TIGR01730 db_xref GO:0008565 db_xref InterPro:IPR006143 2612737 2613075 gene locus_tag Alide2_2499 2612737 2613075 CDS product regulatory protein ArsR transl_table 11 protein_id gb|AEB84858.1||gnl|jgi|Alide2_2499 note KEGG: pna:Pnap_2826 regulatory protein, ArsR~PFAM: HTH transcriptional regulator, ArsR~SMART: HTH transcriptional regulator, ArsR inference protein motif:PFAM:PF01022 db_xref GO:0003700 db_xref InterPro:IPR001845 2613194 2613099 gene locus_tag Alide2_2500 pseudo 2614262 2613477 gene locus_tag Alide2_2501 2614262 2613477 CDS product 4-hydroxy-2-oxovalerate aldolase EC_number 4.1.3.39 transl_table 11 protein_id gb|AEB84859.1||gnl|jgi|Alide2_2501 note KEGG: tjr:TherJR_2256 2-dehydro-3-deoxyglucarate aldolase~PFAM: Aldehyde-lyase domain inference protein motif:PRIAM:4.1.3.39 db_xref InterPro:IPR005000 2614996 2614298 gene locus_tag Alide2_2502 2614996 2614298 CDS product Dimethylmenaquinone methyltransferase transl_table 11 protein_id gb|AEB84860.1||gnl|jgi|Alide2_2502 note PFAM: Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase~KEGG: rpa:RPA2008 hypothetical protein inference protein motif:PFAM:PF03737 db_xref InterPro:IPR005493 2616022 2615006 gene locus_tag Alide2_2503 2616022 2615006 CDS product extra-cytoplasmic solute receptor family protein 99 transl_table 11 protein_id gb|AEB84861.1||gnl|jgi|Alide2_2503 note KEGG: axy:AXYL_04163 extra-cytoplasmic solute receptor family protein 99 inference similar to AA sequence:KEGG:AXYL_04163 db_xref InterPro:IPR005064 2617039 2616047 gene locus_tag Alide2_2504 2617039 2616047 CDS product putative secreted protein transl_table 11 protein_id gb|AEB84862.1||gnl|jgi|Alide2_2504 note KEGG: bpt:Bpet3225 putative secreted protein inference similar to AA sequence:KEGG:Bpet3225 db_xref InterPro:IPR005064 2618094 2617054 gene locus_tag Alide2_2505 2618094 2617054 CDS product transcriptional regulator, LacI family transl_table 11 protein_id gb|AEB84863.1||gnl|jgi|Alide2_2505 note KEGG: bxe:Bxe_C0307 LacI family transcription regulator~PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI~SMART: HTH transcriptional regulator, LacI inference protein motif:PFAM:PF00532 db_xref GO:0003700 db_xref InterPro:IPR000843 db_xref InterPro:IPR001761 2618852 2618091 gene locus_tag Alide2_2506 2618852 2618091 CDS product 3-oxoacyl-(acyl-carrier-protein) reductase EC_number 1.1.1.100 transl_table 11 protein_id gb|AEB84864.1||gnl|jgi|Alide2_2506 note PFAM: Short-chain dehydrogenase/reductase SDR~KEGG: bxe:Bxe_C0308 putative short-chain dehydrogenase/reductase~SMART: Polyketide synthase/Fatty acid synthase, KR inference protein motif:PRIAM:1.1.1.100 db_xref InterPro:IPR002198 db_xref InterPro:IPR020842 2620174 2618855 gene locus_tag Alide2_2507 2620174 2618855 CDS product Histidinol dehydrogenase EC_number 1.1.1.23 transl_table 11 protein_id gb|AEB84865.1||gnl|jgi|Alide2_2507 note PFAM: Histidinol dehydrogenase, prokaryotic-type~TIGRFAM: Histidinol dehydrogenase, prokaryotic-type~HAMAP: Histidinol dehydrogenase, prokaryotic-type~KEGG: xtr:100486926 histidinol dehydrogenase 2-like inference protein motif:HAMAP:MF_01024 db_xref InterPro:IPR012131 2620401 2621006 gene locus_tag Alide2_2508 2620401 2621006 CDS product Methyltransferase type 11 transl_table 11 protein_id gb|AEB84866.1||gnl|jgi|Alide2_2508 note PFAM: Methyltransferase type 11~KEGG: ajs:Ajs_2324 methyltransferase type 11 inference protein motif:PFAM:PF08241 db_xref GO:0008168 db_xref InterPro:IPR013216 2621017 2621685 gene locus_tag Alide2_2509 2621017 2621685 CDS product DTW domain containing protein transl_table 11 protein_id gb|AEB84867.1||gnl|jgi|Alide2_2509 note PFAM: DTW~KEGG: dia:Dtpsy_1758 DTW domain containing protein inference protein motif:PFAM:PF03942 db_xref InterPro:IPR005636 2621702 2622283 gene locus_tag Alide2_2510 2621702 2622283 CDS product uncharacterized peroxidase-related enzyme transl_table 11 protein_id gb|AEB84868.1||gnl|jgi|Alide2_2510 note KEGG: dia:Dtpsy_1757 uncharacterized peroxidase-related enzyme~TIGRFAM: Uncharacterised peroxidase-related; Alkylhydroperoxidase AhpD core~PFAM: Carboxymuconolactone decarboxylase inference protein motif:TFAM:TIGR01926 db_xref InterPro:IPR003779 db_xref InterPro:IPR004675 db_xref InterPro:IPR010195 2624084 2622348 gene locus_tag Alide2_2511 2624084 2622348 CDS product sulfatase transl_table 11 protein_id gb|AEB84869.1||gnl|jgi|Alide2_2511 note PFAM: Sulfatase; Domain of unknown function DUF1705~KEGG: ajs:Ajs_1955 sulfatase inference protein motif:PFAM:PF00884 db_xref GO:0008484 db_xref InterPro:IPR000917 db_xref InterPro:IPR012549 2624817 2624089 gene locus_tag Alide2_2512 2624817 2624089 CDS product PAP2 (acid phosphatase) superfamily protein-like protein transl_table 11 protein_id gb|AEB84870.1||gnl|jgi|Alide2_2512 note KEGG: dia:Dtpsy_1755 PAP2 (acid phosphatase) superfamily protein-like protein inference similar to AA sequence:KEGG:Dtpsy_1755 2624951 2625625 gene locus_tag Alide2_2513 2624951 2625625 CDS product two component transcriptional regulator, winged helix family transl_table 11 protein_id gb|AEB84871.1||gnl|jgi|Alide2_2513 note KEGG: dia:Dtpsy_1754 two component transcriptional regulator, winged helix family~PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal~SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal inference protein motif:PFAM:PF00072 db_xref GO:0000156 db_xref GO:0003677 db_xref InterPro:IPR001789 db_xref InterPro:IPR001867 2625629 2626996 gene locus_tag Alide2_2514 2625629 2626996 CDS product integral membrane sensor signal transduction histidine kinase transl_table 11 protein_id gb|AEB84872.1||gnl|jgi|Alide2_2514 note KEGG: dia:Dtpsy_1753 histidine kinase~PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain~SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain inference protein motif:PFAM:PF02518 db_xref GO:0000155 db_xref GO:0005524 db_xref InterPro:IPR003594 db_xref InterPro:IPR003661 2627782 2627012 gene locus_tag Alide2_2515 2627782 2627012 CDS product Enoyl-CoA hydratase/isomerase transl_table 11 protein_id gb|AEB84873.1||gnl|jgi|Alide2_2515 note PFAM: Crotonase, core~KEGG: bbr:BB4306 putative enoyl-CoA hydratase/isomerase family protein inference protein motif:PFAM:PF00378 db_xref GO:0003824 db_xref InterPro:IPR001753 2628749 2627787 gene locus_tag Alide2_2516 2628749 2627787 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84874.1||gnl|jgi|Alide2_2516 note KEGG: xtr:100486988 UPF0065 protein in tcbD-tcbE intergenic region-like inference similar to AA sequence:KEGG:100486988 db_xref InterPro:IPR005064 2629798 2628791 gene locus_tag Alide2_2517 2629798 2628791 CDS product NADPH:quinone reductase EC_number 1.6.5.5 transl_table 11 protein_id gb|AEB84875.1||gnl|jgi|Alide2_2517 note KEGG: bbr:BB4304 putative zinc-binding dehydrogenase~PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like inference protein motif:PRIAM:1.6.5.5 db_xref InterPro:IPR013149 db_xref InterPro:IPR013154 2631015 2629798 gene locus_tag Alide2_2518 2631015 2629798 CDS product Formyl-CoA transferase EC_number 2.8.3.16 transl_table 11 protein_id gb|AEB84876.1||gnl|jgi|Alide2_2518 note KEGG: bbr:BB4303 putative racemase~PFAM: CoA-transferase family III inference protein motif:PRIAM:2.8.3.16 db_xref InterPro:IPR003673 2631153 2632322 gene locus_tag Alide2_2519 2631153 2632322 CDS product Butyryl-CoA dehydrogenase EC_number 1.3.8.1 transl_table 11 protein_id gb|AEB84877.1||gnl|jgi|Alide2_2519 note KEGG: xtr:100487140 short-chain specific acyl-CoA dehydrogenase, mitochondrial-like~PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal inference protein motif:PRIAM:1.3.99.2 db_xref InterPro:IPR006090 db_xref InterPro:IPR006091 db_xref InterPro:IPR006092 2632339 2633394 gene locus_tag Alide2_2520 2632339 2633394 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84878.1||gnl|jgi|Alide2_2520 note KEGG: bbr:BB1197 hypothetical protein inference similar to AA sequence:KEGG:BB1197 2633412 2634548 gene locus_tag Alide2_2521 2633412 2634548 CDS product Formyl-CoA transferase EC_number 2.8.3.16 transl_table 11 protein_id gb|AEB84879.1||gnl|jgi|Alide2_2521 note KEGG: cti:RALTA_B0352 putative acyl-CoA transferases/carnitine dehydratase~PFAM: CoA-transferase family III inference protein motif:PRIAM:2.8.3.16 db_xref InterPro:IPR003673 2634700 2635341 gene locus_tag Alide2_2522 2634700 2635341 CDS product regulatory protein TetR transl_table 11 protein_id gb|AEB84880.1||gnl|jgi|Alide2_2522 note PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal~KEGG: bbr:BB4302 TetR family transcriptional regulator inference protein motif:PFAM:PF00440 db_xref GO:0003700 db_xref InterPro:IPR001647 2635491 2637206 gene locus_tag Alide2_2523 2635491 2637206 CDS product Electron-transferring-flavoprotein dehydrogenase EC_number 1.5.5.1 transl_table 11 protein_id gb|AEB84881.1||gnl|jgi|Alide2_2523 note KEGG: xtr:100487291 electron transfer flavoprotein-ubiquinone oxidoreductase-like~PFAM: Electron transfer flavoprotein-ubiquinone oxidoreductase; FAD dependent oxidoreductase inference protein motif:PRIAM:1.5.5.1 db_xref InterPro:IPR006076 db_xref InterPro:IPR007859 2637445 2638413 gene locus_tag Alide2_2524 2637445 2638413 CDS product ABC transporter substrate binding protein transl_table 11 protein_id gb|AEB84882.1||gnl|jgi|Alide2_2524 note PFAM: ABC transporter substrate binding protein~KEGG: ajs:Ajs_1949 hypothetical protein inference protein motif:PFAM:PF04392 db_xref InterPro:IPR007487 2638495 2639382 gene locus_tag Alide2_2525 2638495 2639382 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB84883.1||gnl|jgi|Alide2_2525 note PFAM: ABC transporter permease~KEGG: dac:Daci_4312 inner-membrane translocator inference protein motif:PFAM:PF02653 db_xref GO:0005215 db_xref InterPro:IPR001851 2639395 2640189 gene locus_tag Alide2_2526 2639395 2640189 CDS product Phosphonate-transporting ATPase EC_number 3.6.3.28 transl_table 11 protein_id gb|AEB84884.1||gnl|jgi|Alide2_2526 note PFAM: ABC transporter-like~KEGG: dia:Dtpsy_1748 ABC transporter related~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.28 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 2642289 2640364 gene locus_tag Alide2_2527 2642289 2640364 CDS product sigma54 specific transcriptional regulator with PAS/PAC sensor, Fis family transl_table 11 protein_id gb|AEB84885.1||gnl|jgi|Alide2_2527 note KEGG: azo:azo3875 sigma-54-dependent transcriptional regulator~PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type~SMART: ATPase, AAA+ type, core; PAS inference protein motif:PFAM:PF00158 db_xref GO:0003700 db_xref GO:0005524 db_xref GO:0008134 db_xref InterPro:IPR000014 db_xref InterPro:IPR002078 db_xref InterPro:IPR002197 db_xref InterPro:IPR003593 2643276 2642401 gene locus_tag Alide2_2528 2643276 2642401 CDS product alpha/beta hydrolase fold protein transl_table 11 protein_id gb|AEB84886.1||gnl|jgi|Alide2_2528 note PFAM: Alpha/beta hydrolase fold-1~KEGG: vap:Vapar_5337 alpha/beta hydrolase fold protein inference protein motif:PFAM:PF00561 db_xref InterPro:IPR000073 2644870 2643290 gene locus_tag Alide2_2529 2644870 2643290 CDS product Gluconate 2-dehydrogenase (acceptor) EC_number 1.1.99.3 transl_table 11 protein_id gb|AEB84887.1||gnl|jgi|Alide2_2529 note KEGG: azo:azo3873 putative glucase dehydrogenase subunit alpha~PFAM: Glucose-methanol-choline oxidoreductase, N-terminal; Glucose-methanol-choline oxidoreductase, C-terminal inference protein motif:PRIAM:1.1.99.3 db_xref InterPro:IPR000172 db_xref InterPro:IPR007867 2645484 2644903 gene locus_tag Alide2_2530 2645484 2644903 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84888.1||gnl|jgi|Alide2_2530 note KEGG: azo:azo3872 hypothetical protein inference similar to AA sequence:KEGG:azo3872 db_xref InterPro:IPR006311 2646254 2645541 gene locus_tag Alide2_2531 2646254 2645541 CDS product biotin/lipoate A/B protein ligase transl_table 11 protein_id gb|AEB84889.1||gnl|jgi|Alide2_2531 note PFAM: Biotin/lipoate A/B protein ligase~KEGG: azo:azo3871 putative lipoate protein ligase inference protein motif:PFAM:PF03099 db_xref GO:0003824 db_xref InterPro:IPR004143 2646964 2646251 gene locus_tag Alide2_2532 2646964 2646251 CDS product Dihydrolipoyllysine-residue acetyltransferase EC_number 2.3.1.12 transl_table 11 protein_id gb|AEB84890.1||gnl|jgi|Alide2_2532 note KEGG: azo:azo3870 hypothetical protein~PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain inference protein motif:PRIAM:2.3.1.12 db_xref InterPro:IPR001078 2647206 2646961 gene locus_tag Alide2_2533 2647206 2646961 CDS product biotin/lipoyl attachment domain-containing protein transl_table 11 protein_id gb|AEB84891.1||gnl|jgi|Alide2_2533 note PFAM: Biotin/lipoyl attachment~KEGG: rfr:Rfer_3967 biotin/lipoyl attachment inference protein motif:PFAM:PF00364 db_xref InterPro:IPR000089 2648240 2647203 gene locus_tag Alide2_2534 2648240 2647203 CDS product Pyruvate dehydrogenase (acetyl-transferring) EC_number 1.2.4.1 transl_table 11 protein_id gb|AEB84892.1||gnl|jgi|Alide2_2534 note PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal~KEGG: rfr:Rfer_3966 transketolase~SMART: Transketolase-like, pyrimidine-binding domain inference protein motif:PRIAM:1.2.4.1 db_xref InterPro:IPR005475 db_xref InterPro:IPR005476 2649273 2648266 gene locus_tag Alide2_2535 2649273 2648266 CDS product Pyruvate dehydrogenase (acetyl-transferring) EC_number 1.2.4.1 transl_table 11 protein_id gb|AEB84893.1||gnl|jgi|Alide2_2535 note KEGG: azo:azo3867 acetoin dehydrogenase subunit alpha~PFAM: Dehydrogenase, E1 component inference protein motif:PRIAM:1.2.4.1 db_xref InterPro:IPR001017 2650070 2649609 gene locus_tag Alide2_2536 2650070 2649609 CDS product transcriptional regulator, AsnC family transl_table 11 protein_id gb|AEB84894.1||gnl|jgi|Alide2_2536 note KEGG: dia:Dtpsy_1745 transcriptional regulator, AsnC family~PFAM: Transcription regulator AsnC-type, C-terminal~SMART: Transcription regulator AsnC-type inference protein motif:PFAM:PF01037 db_xref GO:0003700 db_xref GO:0043565 db_xref InterPro:IPR019887 db_xref InterPro:IPR019888 2650356 2651327 gene locus_tag Alide2_2537 2650356 2651327 CDS product TRAP dicarboxylate transporter, DctP subunit transl_table 11 protein_id gb|AEB84895.1||gnl|jgi|Alide2_2537 note KEGG: ajs:Ajs_1941 TRAP dicarboxylate transporter, DctP subunit~TIGRFAM: TRAP dicarboxylate transporter, DctP subunit~PFAM: Extracellular solute-binding protein, family 7, bacteria inference protein motif:TFAM:TIGR00787 db_xref InterPro:IPR004682 db_xref InterPro:IPR018389 2651403 2651897 gene locus_tag Alide2_2538 2651403 2651897 CDS product Tripartite ATP-independent periplasmic transporter DctQ component transl_table 11 protein_id gb|AEB84896.1||gnl|jgi|Alide2_2538 note PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component~KEGG: dia:Dtpsy_1743 tripartite ATP-independent periplasmic transporter DctQ component inference protein motif:PFAM:PF04290 db_xref InterPro:IPR007387 2651894 2653171 gene locus_tag Alide2_2539 2651894 2653171 CDS product TRAP dicarboxylate transporter, DctM subunit transl_table 11 protein_id gb|AEB84897.1||gnl|jgi|Alide2_2539 note KEGG: dia:Dtpsy_1742 TRAP dicarboxylate transporter, DctM subunit~TIGRFAM: TRAP dicarboxylate transporter, DctM subunit~PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit inference protein motif:TFAM:TIGR00786 db_xref InterPro:IPR004681 db_xref InterPro:IPR010656 2654257 2653190 gene locus_tag Alide2_2540 2654257 2653190 CDS product beta-lactamase domain protein transl_table 11 protein_id gb|AEB84898.1||gnl|jgi|Alide2_2540 note KEGG: bpt:Bpet1117 metallo-beta-lactamase family protein~PFAM: Beta-lactamase-like~SMART: Beta-lactamase-like inference protein motif:PFAM:PF00753 db_xref GO:0016787 db_xref InterPro:IPR001279 2654334 2654421 misc_binding note gcvT element as predicted by Rfam (RF00504), score 40.52 bound_moiety glycine 2654440 2654542 misc_binding note gcvT element as predicted by Rfam (RF00504), score 55.89 bound_moiety glycine 2654558 2655721 gene locus_tag Alide2_2541 2654558 2655721 CDS product glycine cleavage system T protein EC_number 2.1.2.10 transl_table 11 protein_id gb|AEB84899.1||gnl|jgi|Alide2_2541 note TIGRFAM: Glycine cleavage system T protein~KEGG: xtr:100488488 hypothetical protein LOC100488488~PFAM: Glycine cleavage T-protein, N-terminal; Glycine cleavage T-protein, C-terminal barrel inference protein motif:TFAM:TIGR00528 db_xref GO:0004047 db_xref InterPro:IPR006222 db_xref InterPro:IPR006223 db_xref InterPro:IPR013977 2655808 2656182 gene locus_tag Alide2_2542 2655808 2656182 CDS product glycine cleavage system H protein transl_table 11 protein_id gb|AEB84900.1||gnl|jgi|Alide2_2542 note KEGG: xtr:100488332 glycine cleavage system H protein-like~TIGRFAM: Glycine cleavage H-protein, subgroup~PFAM: Glycine cleavage H-protein inference protein motif:TFAM:TIGR00527 db_xref InterPro:IPR002930 db_xref InterPro:IPR017453 2656311 2659199 gene locus_tag Alide2_2543 2656311 2659199 CDS product Glycine dehydrogenase (decarboxylating) transl_table 11 protein_id gb|AEB84901.1||gnl|jgi|Alide2_2543 note TIGRFAM: Glycine cleavage system P protein, homodimeric~HAMAP: Glycine cleavage system P protein, homodimeric~KEGG: dia:Dtpsy_1739 glycine dehydrogenase~PFAM: Glycine cleavage system P-protein, N-terminal inference protein motif:HAMAP:MF_00711 db_xref InterPro:IPR003437 db_xref InterPro:IPR020580 2659358 2659618 gene locus_tag Alide2_2544 2659358 2659618 CDS product protein of unknown function DUF156 transl_table 11 protein_id gb|AEB84902.1||gnl|jgi|Alide2_2544 note PFAM: Protein of unknown function DUF156~KEGG: ajs:Ajs_2799 hypothetical protein inference protein motif:PFAM:PF02583 db_xref InterPro:IPR003735 2659642 2660757 gene locus_tag Alide2_2545 2659642 2660757 CDS product S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase transl_table 11 protein_id gb|AEB84903.1||gnl|jgi|Alide2_2545 note KEGG: dia:Dtpsy_2290 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase~TIGRFAM: Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase~PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, C-terminal inference protein motif:TFAM:TIGR02818 db_xref GO:0008270 db_xref GO:0051903 db_xref InterPro:IPR013149 db_xref InterPro:IPR013154 db_xref InterPro:IPR014183 2660867 2661727 gene locus_tag Alide2_2546 2660867 2661727 CDS product S-formylglutathione hydrolase EC_number 3.1.2.12 transl_table 11 protein_id gb|AEB84904.1||gnl|jgi|Alide2_2546 note TIGRFAM: S-formylglutathione hydrolase~KEGG: ajs:Ajs_2801 carboxylesterase~PFAM: Putative esterase inference protein motif:TFAM:TIGR02821 db_xref GO:0004091 db_xref GO:0018738 db_xref InterPro:IPR000801 db_xref InterPro:IPR014186 2661917 2661738 gene locus_tag Alide2_2547 2661917 2661738 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84905.1||gnl|jgi|Alide2_2547 inference ab initio prediction:Prodigal:1.4 2661991 2662878 gene locus_tag Alide2_2548 2661991 2662878 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB84906.1||gnl|jgi|Alide2_2548 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: ctt:CtCNB1_2228 transcriptional regulator, LysR family inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 2663993 2662875 gene locus_tag Alide2_2549 2663993 2662875 CDS product Radical SAM domain protein transl_table 11 protein_id gb|AEB84907.1||gnl|jgi|Alide2_2549 note KEGG: ajs:Ajs_2803 radical SAM domain-containing protein~PFAM: Radical SAM~SMART: Elongator protein 3/MiaB/NifB inference protein motif:PFAM:PF04055 db_xref GO:0003824 db_xref GO:0051536 db_xref InterPro:IPR006638 db_xref InterPro:IPR007197 2664269 2664676 gene locus_tag Alide2_2550 2664269 2664676 CDS product GreA/GreB family elongation factor transl_table 11 protein_id gb|AEB84908.1||gnl|jgi|Alide2_2550 note PFAM: Transcription elongation factor, GreA/GreB, C-terminal~KEGG: ajs:Ajs_2805 GreA/GreB family elongation factor inference protein motif:PFAM:PF01272 db_xref GO:0003677 db_xref GO:0003711 db_xref InterPro:IPR001437 2665880 2664723 gene locus_tag Alide2_2551 2665880 2664723 CDS product acyltransferase 3 transl_table 11 protein_id gb|AEB84909.1||gnl|jgi|Alide2_2551 note PFAM: Acyltransferase 3~KEGG: dia:Dtpsy_2295 acyltransferase 3 inference protein motif:PFAM:PF01757 db_xref GO:0003700 db_xref InterPro:IPR002656 2666903 2665947 gene locus_tag Alide2_2552 2666903 2665947 CDS product 2-nitropropane dioxygenase NPD transl_table 11 protein_id gb|AEB84910.1||gnl|jgi|Alide2_2552 note PFAM: 2-nitropropane dioxygenase, NPD~KEGG: ajs:Ajs_2807 2-nitropropane dioxygenase, NPD inference protein motif:PFAM:PF03060 db_xref GO:0018580 db_xref InterPro:IPR004136 2668772 2666982 gene locus_tag Alide2_2553 2668772 2666982 CDS product Butyryl-CoA dehydrogenase EC_number 1.3.8.1 transl_table 11 protein_id gb|AEB84911.1||gnl|jgi|Alide2_2553 note KEGG: dia:Dtpsy_2297 acyl-CoA dehydrogenase domain protein~PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA dehydrogenase, N-terminal, bacteria inference protein motif:PRIAM:1.3.99.2 db_xref InterPro:IPR006090 db_xref InterPro:IPR006091 db_xref InterPro:IPR006092 db_xref InterPro:IPR020953 2669788 2668856 gene locus_tag Alide2_2554 2669788 2668856 CDS product Electron transfer flavoprotein alpha subunit transl_table 11 protein_id gb|AEB84912.1||gnl|jgi|Alide2_2554 note KEGG: dia:Dtpsy_2298 electron transfer flavoprotein alpha subunit~PFAM: Electron transfer flavoprotein, alpha subunit, C-terminal; Electron transfer flavoprotein, alpha/beta-subunit, N-terminal~SMART: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal inference protein motif:PFAM:PF00766 db_xref InterPro:IPR014730 db_xref InterPro:IPR014731 2670555 2669806 gene locus_tag Alide2_2555 2670555 2669806 CDS product Electron transfer flavoprotein alpha/beta-subunit transl_table 11 protein_id gb|AEB84913.1||gnl|jgi|Alide2_2555 note KEGG: dia:Dtpsy_3012 electron transfer flavoprotein alpha/beta-subunit~PFAM: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal~SMART: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal inference protein motif:PFAM:PF01012 db_xref InterPro:IPR014730 2671506 2670727 gene locus_tag Alide2_2556 2671506 2670727 CDS product Enoyl-CoA hydratase/isomerase transl_table 11 protein_id gb|AEB84914.1||gnl|jgi|Alide2_2556 note PFAM: Crotonase, core~KEGG: ajs:Ajs_2812 enoyl-CoA hydratase inference protein motif:PFAM:PF00378 db_xref GO:0003824 db_xref InterPro:IPR001753 2672480 2671521 gene locus_tag Alide2_2557 2672480 2671521 CDS product histone deacetylase superfamily transl_table 11 protein_id gb|AEB84915.1||gnl|jgi|Alide2_2557 note PFAM: Histone deacetylase superfamily~KEGG: ajs:Ajs_2813 histone deacetylase superfamily protein inference protein motif:PFAM:PF00850 db_xref InterPro:IPR000286 2672519 2673439 gene locus_tag Alide2_2558 2672519 2673439 CDS product ATPase associated with various cellular activities AAA_3 transl_table 11 protein_id gb|AEB84916.1||gnl|jgi|Alide2_2558 note KEGG: dia:Dtpsy_2303 ATPase associated with various cellular activities AAA_3~PFAM: ATPase, AAA-3~SMART: ATPase, AAA+ type, core inference protein motif:PFAM:PF07726 db_xref GO:0005524 db_xref GO:0016887 db_xref InterPro:IPR003593 db_xref InterPro:IPR011703 2673439 2674457 gene locus_tag Alide2_2559 pseudo 2674537 2676594 gene locus_tag Alide2_2560 2674537 2676594 CDS product Protein of unknown function DUF3488 transl_table 11 protein_id gb|AEB84917.1||gnl|jgi|Alide2_2560 note KEGG: ajs:Ajs_2816 transglutaminase domain-containing protein~PFAM: Protein of unknown function DUF3488; Transglutaminase-like~SMART: Transglutaminase-like inference protein motif:PFAM:PF11992 db_xref InterPro:IPR002931 db_xref InterPro:IPR021878 2676591 2677661 gene locus_tag Alide2_2561 2676591 2677661 CDS product lytic murein transglycosylase B transl_table 11 protein_id gb|AEB84918.1||gnl|jgi|Alide2_2561 note TIGRFAM: Lytic transglycosylase MltB~KEGG: dia:Dtpsy_2306 lytic murein transglycosylase B inference protein motif:TFAM:TIGR02282 db_xref InterPro:IPR011757 2678675 2677671 gene locus_tag Alide2_2562 2678675 2677671 CDS product 1-deoxy-D-xylulose-5-phosphate synthase EC_number 2.2.1.7 transl_table 11 protein_id gb|AEB84919.1||gnl|jgi|Alide2_2562 note PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal~KEGG: lch:Lcho_4275 transketolase central region~SMART: Transketolase-like, pyrimidine-binding domain inference protein motif:PRIAM:2.2.1.7 db_xref InterPro:IPR005475 db_xref InterPro:IPR005476 2679517 2678690 gene locus_tag Alide2_2563 2679517 2678690 CDS product Transketolase EC_number 2.2.1.1 transl_table 11 protein_id gb|AEB84920.1||gnl|jgi|Alide2_2563 note KEGG: dac:Daci_0728 transketolase domain-containing protein~PFAM: Transketolase, N-terminal inference protein motif:PRIAM:2.2.1.1 db_xref InterPro:IPR005474 2680799 2679540 gene locus_tag Alide2_2564 2680799 2679540 CDS product TRAP dicarboxylate transporter, DctM subunit transl_table 11 protein_id gb|AEB84921.1||gnl|jgi|Alide2_2564 note KEGG: pol:Bpro_1457 TRAP dicarboxylate transporter-DctM subunit~TIGRFAM: TRAP dicarboxylate transporter, DctM subunit~PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit inference protein motif:TFAM:TIGR00786 db_xref InterPro:IPR004681 db_xref InterPro:IPR010656 2681296 2680796 gene locus_tag Alide2_2565 2681296 2680796 CDS product Tripartite ATP-independent periplasmic transporter DctQ component transl_table 11 protein_id gb|AEB84922.1||gnl|jgi|Alide2_2565 note PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component~KEGG: lch:Lcho_0406 tripartite ATP-independent periplasmic transporter DctQ inference protein motif:PFAM:PF04290 db_xref InterPro:IPR007387 2682334 2681351 gene locus_tag Alide2_2566 2682334 2681351 CDS product TRAP dicarboxylate transporter, DctP subunit transl_table 11 protein_id gb|AEB84923.1||gnl|jgi|Alide2_2566 note KEGG: pol:Bpro_1455 TRAP dicarboxylate transporter, DctP subunit~TIGRFAM: TRAP dicarboxylate transporter, DctP subunit~PFAM: Extracellular solute-binding protein, family 7, bacteria inference protein motif:TFAM:TIGR00787 db_xref InterPro:IPR004682 db_xref InterPro:IPR018389 2683120 2682371 gene locus_tag Alide2_2567 2683120 2682371 CDS product 3-oxoacyl-(acyl-carrier-protein) reductase EC_number 1.1.1.100 transl_table 11 protein_id gb|AEB84924.1||gnl|jgi|Alide2_2567 note PFAM: Short-chain dehydrogenase/reductase SDR~KEGG: lch:Lcho_0404 short-chain dehydrogenase/reductase SDR~SMART: Polyketide synthase/Fatty acid synthase, KR inference protein motif:PRIAM:1.1.1.100 db_xref InterPro:IPR002198 db_xref InterPro:IPR020842 2683261 2684139 gene locus_tag Alide2_2568 2683261 2684139 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB84925.1||gnl|jgi|Alide2_2568 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: pol:Bpro_1453 LysR family transcriptional regulator inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 2684292 2686274 gene locus_tag Alide2_2569 2684292 2686274 CDS product transketolase EC_number 2.2.1.3 transl_table 11 protein_id gb|AEB84926.1||gnl|jgi|Alide2_2569 note SMART: Transketolase-like, pyrimidine-binding domain~TIGRFAM: Transketolase, bacterial-like~KEGG: hse:Hsero_0506 transketolase~PFAM: Transketolase, N-terminal; Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal inference protein motif:TFAM:TIGR00232 db_xref GO:0004802 db_xref InterPro:IPR005474 db_xref InterPro:IPR005475 db_xref InterPro:IPR005476 db_xref InterPro:IPR005478 2686289 2687251 gene locus_tag Alide2_2570 2686289 2687251 CDS product Glycerate dehydrogenase EC_number 1.1.1.29 transl_table 11 protein_id gb|AEB84927.1||gnl|jgi|Alide2_2570 note KEGG: bxe:Bxe_B0983 putative 2-hydroxyacid dehydrogenase~PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain inference protein motif:PRIAM:1.1.1.29 db_xref InterPro:IPR006139 db_xref InterPro:IPR006140 2688185 2687271 gene locus_tag Alide2_2571 2688185 2687271 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB84928.1||gnl|jgi|Alide2_2571 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: dia:Dtpsy_2307 transcriptional regulator, LysR family inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 2688300 2689391 gene locus_tag Alide2_2572 2688300 2689391 CDS product Uncharacterized protein family UPF0324 transl_table 11 protein_id gb|AEB84929.1||gnl|jgi|Alide2_2572 note KEGG: dia:Dtpsy_2308 hypothetical protein~TIGRFAM: Uncharacterised protein family UPF0324, bacteria~PFAM: Uncharacterised protein family UPF0324, prokaryote inference protein motif:TFAM:TIGR00698 db_xref InterPro:IPR004630 db_xref InterPro:IPR018383 2690670 2689393 gene locus_tag Alide2_2573 2690670 2689393 CDS product hypothetical protein transl_table 11 protein_id gb|AEB84930.1||gnl|jgi|Alide2_2573 note KEGG: dia:Dtpsy_2309 putative transporter signal peptide protein inference similar to AA sequence:KEGG:Dtpsy_2309 db_xref InterPro:IPR006311 2691515 2690703 gene locus_tag Alide2_2574 2691515 2690703 CDS product Protein of unknown function DUF2242 transl_table 11 protein_id gb|AEB84931.1||gnl|jgi|Alide2_2574 note PFAM: Protein of unknown function DUF2242~KEGG: dia:Dtpsy_2310 putative lipoprotein inference protein motif:PFAM:PF10001 db_xref InterPro:IPR018718 2692845 2691634 gene locus_tag Alide2_2575 2692845 2691634 CDS product protein of unknown function DUF214 transl_table 11 protein_id gb|AEB84932.1||gnl|jgi|Alide2_2575 note PFAM: Domain of unknown function DUF214, ABC transporter permease~KEGG: dia:Dtpsy_2312 protein of unknown function DUF214 inference protein motif:PFAM:PF02687 db_xref InterPro:IPR003838 2693597 2692842 gene locus_tag Alide2_2576 2693597 2692842 CDS product Phosphonate-transporting ATPase EC_number 3.6.3.28 transl_table 11 protein_id gb|AEB84933.1||gnl|jgi|Alide2_2576 note PFAM: ABC transporter-like~KEGG: dia:Dtpsy_2313 ABC transporter related~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.28 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 2694943 2693594 gene locus_tag Alide2_2577 2694943 2693594 CDS product efflux transporter, RND family, MFP subunit transl_table 11 protein_id gb|AEB84934.1||gnl|jgi|Alide2_2577 note KEGG: dia:Dtpsy_2314 efflux transporter, RND family, MFP subunit~TIGRFAM: Secretion protein HlyD~PFAM: Secretion protein HlyD inference protein motif:TFAM:TIGR01730 db_xref GO:0008565 db_xref InterPro:IPR006143 2696346 2694940 gene locus_tag Alide2_2578 2696346 2694940 CDS product RND efflux system, outer membrane lipoprotein, NodT family transl_table 11 protein_id gb|AEB84935.1||gnl|jgi|Alide2_2578 note KEGG: dia:Dtpsy_2315 RND efflux system, outer membrane lipoprotein, NodT family~TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT~PFAM: Outer membrane efflux protein inference protein motif:TFAM:TIGR01845 db_xref GO:0005215 db_xref GO:0008289 db_xref InterPro:IPR003423 db_xref InterPro:IPR010131 2697512 2696469 gene locus_tag Alide2_2579 2697512 2696469 CDS product metalloendopeptidase, glycoprotease family EC_number 3.4.24.57 transl_table 11 protein_id gb|AEB84936.1||gnl|jgi|Alide2_2579 note TIGRFAM: Peptidase M22, glycoprotease, subgroup; Peptidase M22, O-sialoglycoprotein peptidase~KEGG: dia:Dtpsy_2317 putative DNA-binding/iron metalloprotein/AP endonuclease~PFAM: Peptidase M22, glycoprotease inference protein motif:TFAM:TIGR00329 db_xref GO:0004222 db_xref InterPro:IPR000905 db_xref InterPro:IPR017861 db_xref InterPro:IPR022450 2697972 2697535 gene locus_tag Alide2_2580 2697972 2697535 CDS product putative signal transduction protein with CBS domains transl_table 11 protein_id gb|AEB84937.1||gnl|jgi|Alide2_2580 note KEGG: dia:Dtpsy_2323 putative signal transduction protein with CBS domains~PFAM: Cystathionine beta-synthase, core~SMART: Cystathionine beta-synthase, core inference protein motif:PFAM:PF00571 db_xref InterPro:IPR000644 2698698 2698057 gene locus_tag Alide2_2581 2698698 2698057 CDS product calcium-binding EF-hand-containing protein transl_table 11 protein_id gb|AEB84938.1||gnl|jgi|Alide2_2581 note KEGG: dia:Dtpsy_2324 calcium-binding EF-hand-containing protein inference similar to AA sequence:KEGG:Dtpsy_2324 2699101 2700339 gene locus_tag Alide2_2582 2699101 2700339 CDS product efflux transporter, RND family, MFP subunit transl_table 11 protein_id gb|AEB84939.1||gnl|jgi|Alide2_2582 note KEGG: aav:Aave_2112 RND family efflux transporter MFP subunit~TIGRFAM: Secretion protein HlyD~PFAM: Secretion protein HlyD inference protein motif:TFAM:TIGR01730 db_xref GO:0008565 db_xref InterPro:IPR006143 2700349 2703492 gene locus_tag Alide2_2583 2700349 2703492 CDS product transporter, hydrophobe/amphiphile efflux-1 (HAE1) family transl_table 11 protein_id gb|AEB84940.1||gnl|jgi|Alide2_2583 note KEGG: dia:Dtpsy_2326 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family~TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1~PFAM: Acriflavin resistance protein inference protein motif:TFAM:TIGR00915 db_xref GO:0005215 db_xref InterPro:IPR001036 db_xref InterPro:IPR004764 2703489 2704997 gene locus_tag Alide2_2584 2703489 2704997 CDS product RND efflux system, outer membrane lipoprotein, NodT family transl_table 11 protein_id gb|AEB84941.1||gnl|jgi|Alide2_2584 note KEGG: dia:Dtpsy_2327 RND efflux system, outer membrane lipoprotein, NodT family~TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT~PFAM: Outer membrane efflux protein inference protein motif:TFAM:TIGR01845 db_xref GO:0005215 db_xref GO:0008289 db_xref InterPro:IPR003423 db_xref InterPro:IPR010131 2705251 2707701 gene locus_tag Alide2_2585 2705251 2707701 CDS product nitrite reductase (NAD(P)H), large subunit EC_number 1.7.1.4 transl_table 11 protein_id gb|AEB84942.1||gnl|jgi|Alide2_2585 note TIGRFAM: Nitrite reductase [NAD(P)H] large subunit, NirB~KEGG: ajs:Ajs_2839 assimilatory nitrite reductase (NAD(P)H) large subunit precursor~PFAM: Nitrite/sulphite reductase 4Fe-4S domain; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD-like [2Fe-2S]-binding domain; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like inference protein motif:TFAM:TIGR02374 db_xref GO:0008942 db_xref GO:0050660 db_xref GO:0050661 db_xref InterPro:IPR005117 db_xref InterPro:IPR006067 db_xref InterPro:IPR007419 db_xref InterPro:IPR012744 db_xref InterPro:IPR013027 2707774 2708151 gene locus_tag Alide2_2586 2707774 2708151 CDS product nitrite reductase (NAD(P)H), small subunit transl_table 11 protein_id gb|AEB84943.1||gnl|jgi|Alide2_2586 note KEGG: ajs:Ajs_2840 assimilatory nitrite reductase (NAD(P)H) small subunit~TIGRFAM: Nitrite reductase [NAD(P)H] large subunit, NirD~PFAM: Rieske [2Fe-2S] iron-sulphur domain inference protein motif:TFAM:TIGR02378 db_xref GO:0008942 db_xref InterPro:IPR012748 db_xref InterPro:IPR017941 2708148 2710940 gene locus_tag Alide2_2587 2708148 2710940 CDS product Nitrate reductase EC_number 1.7.99.4 transl_table 11 protein_id gb|AEB84944.1||gnl|jgi|Alide2_2587 note PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase, Fe4S4 domain; Molydopterin dinucleotide-binding domain; BFD-like [2Fe-2S]-binding domain~KEGG: ajs:Ajs_2841 assimilatory nitrate reductase (NADH) alpha subunit apoprotein~SMART: Molybdopterin oxidoreductase, Fe4S4 domain inference protein motif:PRIAM:1.7.99.4 db_xref InterPro:IPR006656 db_xref InterPro:IPR006657 db_xref InterPro:IPR006963 db_xref InterPro:IPR007419 2710991 2712214 gene locus_tag Alide2_2588 2710991 2712214 CDS product major facilitator superfamily MFS_1 transl_table 11 protein_id gb|AEB84945.1||gnl|jgi|Alide2_2588 note PFAM: Major facilitator superfamily MFS-1~KEGG: pol:Bpro_3273 major facilitator transporter inference protein motif:PFAM:PF07690 db_xref InterPro:IPR011701 2712829 2712254 gene locus_tag Alide2_2589 2712829 2712254 CDS product SNARE associated Golgi protein-like protein transl_table 11 protein_id gb|AEB84946.1||gnl|jgi|Alide2_2589 note PFAM: SNARE associated Golgi protein~KEGG: net:Neut_2429 hypothetical protein inference protein motif:PFAM:PF09335 db_xref InterPro:IPR015414 2712965 2713933 gene locus_tag Alide2_2590 2712965 2713933 CDS product Glycosyl transferase, family 3 transl_table 11 protein_id gb|AEB84947.1||gnl|jgi|Alide2_2590 note PFAM: Glycosyl transferase, family 3, N-terminal~KEGG: ajs:Ajs_2842 glycosyl transferase family protein inference protein motif:PFAM:PF02885 db_xref InterPro:IPR017459 2713930 2714691 gene locus_tag Alide2_2591 2713930 2714691 CDS product uroporphyrin-III C-methyltransferase EC_number 2.1.1.107 transl_table 11 protein_id gb|AEB84948.1||gnl|jgi|Alide2_2591 note TIGRFAM: Uroporphyrin-III C-methyltransferase, C-terminal~KEGG: ajs:Ajs_2843 uroporphyrinogen-III C-methyltransferase~PFAM: Tetrapyrrole methylase inference protein motif:TFAM:TIGR01469 db_xref GO:0008168 db_xref InterPro:IPR000878 db_xref InterPro:IPR006366 2715201 2714692 gene locus_tag Alide2_2592 2715201 2714692 CDS product thioesterase superfamily protein transl_table 11 protein_id gb|AEB84949.1||gnl|jgi|Alide2_2592 note PFAM: Thioesterase superfamily~KEGG: dia:Dtpsy_2333 thioesterase superfamily protein inference protein motif:PFAM:PF03061 db_xref InterPro:IPR006683 2715266 2716507 gene locus_tag Alide2_2593 2715266 2716507 CDS product HI0933 family protein transl_table 11 protein_id gb|AEB84950.1||gnl|jgi|Alide2_2593 note KEGG: dia:Dtpsy_2335 HI0933 family protein~TIGRFAM: Conserved hypothetical protein CHP00275, flavoprotein HI0933-like~PFAM: Conserved hypothetical protein CHP00275, flavoprotein HI0933-like inference protein motif:TFAM:TIGR00275 db_xref InterPro:IPR004792 2716618 2717829 gene locus_tag Alide2_2594 2716618 2717829 CDS product NnrS family protein transl_table 11 protein_id gb|AEB84951.1||gnl|jgi|Alide2_2594 note PFAM: NnrS~KEGG: ajs:Ajs_2847 NnrS family protein inference protein motif:PFAM:PF05940 db_xref InterPro:IPR010266 2717882 2718166 gene locus_tag Alide2_2595 2717882 2718166 CDS product Protein of unknown function DUF2249 transl_table 11 protein_id gb|AEB84952.1||gnl|jgi|Alide2_2595 note PFAM: Protein of unknown function DUF2249~KEGG: dia:Dtpsy_2337 hypothetical protein inference protein motif:PFAM:PF10006 db_xref InterPro:IPR018720 2718790 2718236 gene locus_tag Alide2_2596 2718790 2718236 CDS product FeS assembly SUF system protein SufT transl_table 11 protein_id gb|AEB84953.1||gnl|jgi|Alide2_2596 note KEGG: dia:Dtpsy_2338 FeS assembly SUF system protein SufT~TIGRFAM: FeS assembly SUF system protein SufT, putative~PFAM: Domain of unknown function DUF59 inference protein motif:TFAM:TIGR03406 db_xref InterPro:IPR002744 db_xref InterPro:IPR017776 2719251 2718787 gene locus_tag Alide2_2597 2719251 2718787 CDS product SUF system FeS assembly protein, NifU family transl_table 11 protein_id gb|AEB84954.1||gnl|jgi|Alide2_2597 note KEGG: dia:Dtpsy_2339 SUF system FeS assembly protein, NifU family~TIGRFAM: SUF system FeS cluster assembly, SufU scaffold~PFAM: NIF system FeS cluster assembly, NifU, N-terminal inference protein motif:TFAM:TIGR01994 db_xref GO:0005506 db_xref GO:0005515 db_xref GO:0051536 db_xref InterPro:IPR002871 db_xref InterPro:IPR011341 2720528 2719248 gene locus_tag Alide2_2598 2720528 2719248 CDS product cysteine desulfurase, SufS subfamily EC_number 2.8.1.7 transl_table 11 protein_id gb|AEB84955.1||gnl|jgi|Alide2_2598 note TIGRFAM: Cysteine desulfurase, SufS~KEGG: ajs:Ajs_2851 aminotransferase, class V~PFAM: Aminotransferase, class V/Cysteine desulfurase inference protein motif:TFAM:TIGR01979 db_xref GO:0030170 db_xref GO:0031071 db_xref InterPro:IPR000192 db_xref InterPro:IPR010970 2721756 2720521 gene locus_tag Alide2_2599 2721756 2720521 CDS product SufBD protein transl_table 11 protein_id gb|AEB84956.1||gnl|jgi|Alide2_2599 note PFAM: SUF system FeS cluster assembly, SufBD~KEGG: ajs:Ajs_2852 SufBD protein inference protein motif:PFAM:PF01458 db_xref GO:0005515 db_xref InterPro:IPR000825 2722534 2721761 gene locus_tag Alide2_2600 2722534 2721761 CDS product FeS assembly ATPase SufC transl_table 11 protein_id gb|AEB84957.1||gnl|jgi|Alide2_2600 note TIGRFAM: ATPase SufC, SUF system FeS cluster assembly~PFAM: ABC transporter-like~KEGG: dia:Dtpsy_2342 FeS assembly ATPase SufC~SMART: ATPase, AAA+ type, core inference protein motif:TFAM:TIGR01978 db_xref GO:0005524 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 db_xref InterPro:IPR010230 2724107 2722605 gene locus_tag Alide2_2601 2724107 2722605 CDS product FeS assembly protein SufB transl_table 11 protein_id gb|AEB84958.1||gnl|jgi|Alide2_2601 note KEGG: dia:Dtpsy_2343 cysteine desulfurase activator complex subunit SufB~TIGRFAM: SUF system FeS cluster assembly, SufB~PFAM: SUF system FeS cluster assembly, SufBD inference protein motif:TFAM:TIGR01980 db_xref GO:0005515 db_xref InterPro:IPR000825 db_xref InterPro:IPR010231 2724386 2724598 gene locus_tag Alide2_2602 2724386 2724598 CDS product 30S ribosomal protein S21 transl_table 11 protein_id gb|AEB84959.1||gnl|jgi|Alide2_2602 note TIGRFAM: Ribosomal protein S21~HAMAP: Ribosomal protein S21~KEGG: vap:Vapar_3540 30S ribosomal protein S21~PFAM: Ribosomal protein S21 inference protein motif:HAMAP:MF_00358 db_xref InterPro:IPR001911 2724684 2725130 gene locus_tag Alide2_2603 2724684 2725130 CDS product GatB/YqeY domain-containing protein transl_table 11 protein_id gb|AEB84960.1||gnl|jgi|Alide2_2603 note KEGG: aav:Aave_2091 GatB/YqeY domain-containing protein inference similar to AA sequence:KEGG:Aave_2091 db_xref InterPro:IPR019004 2726535 2725144 gene locus_tag Alide2_2604 2726535 2725144 CDS product metal dependent phosphohydrolase transl_table 11 protein_id gb|AEB84961.1||gnl|jgi|Alide2_2604 note PFAM: Metal-dependent phosphohydrolase, HD subdomain~KEGG: ajs:Ajs_1963 metal dependent phosphohydrolase inference protein motif:PFAM:PF01966 db_xref InterPro:IPR003607 db_xref InterPro:IPR006674 2727324 2726686 gene locus_tag Alide2_2605 2727324 2726686 CDS product 3-oxoacid CoA-transferase, B subunit EC_number 2.8.3.5 transl_table 11 protein_id gb|AEB84962.1||gnl|jgi|Alide2_2605 note SMART: Coenzyme A transferase~TIGRFAM: 3-oxoacid CoA-transferase, subunit B~KEGG: dia:Dtpsy_1763 3-oxoacid CoA-transferase, B subunit~PFAM: Coenzyme A transferase inference protein motif:TFAM:TIGR02428 db_xref GO:0008410 db_xref InterPro:IPR004165 db_xref InterPro:IPR012791 2728035 2727328 gene locus_tag Alide2_2606 2728035 2727328 CDS product 3-oxoacid CoA-transferase, A subunit EC_number 2.8.3.5 transl_table 11 protein_id gb|AEB84963.1||gnl|jgi|Alide2_2606 note SMART: Coenzyme A transferase~TIGRFAM: 3-oxoacid CoA-transferase, subunit A~KEGG: pna:Pnap_2658 3-oxoacid CoA-transferase, A subunit~PFAM: Coenzyme A transferase inference protein motif:TFAM:TIGR02429 db_xref GO:0008410 db_xref InterPro:IPR004165 db_xref InterPro:IPR012792 2728119 2728664 gene locus_tag Alide2_2607 2728119 2728664 CDS product transcriptional regulator, LuxR family transl_table 11 protein_id gb|AEB84964.1||gnl|jgi|Alide2_2607 note TIGRFAM: PAS~PFAM: Transcription regulator LuxR, C-terminal; PAS fold~KEGG: dia:Dtpsy_1761 transcriptional regulator, LuxR family~SMART: Transcription regulator LuxR, C-terminal; PAS inference protein motif:TFAM:TIGR00229 db_xref GO:0004871 db_xref InterPro:IPR000014 db_xref InterPro:IPR000792 db_xref InterPro:IPR013767 2728802 2730043 gene locus_tag Alide2_2608 2728802 2730043 CDS product acyltransferase 3 transl_table 11 protein_id gb|AEB84965.1||gnl|jgi|Alide2_2608 note PFAM: Acyltransferase 3~KEGG: ajs:Ajs_2326 acyltransferase 3 inference protein motif:PFAM:PF01757 db_xref GO:0004871 db_xref InterPro:IPR002656 2730270 2731616 gene locus_tag Alide2_2609 2730270 2731616 CDS product amino-acid N-acetyltransferase transl_table 11 protein_id gb|AEB84966.1||gnl|jgi|Alide2_2609 note KEGG: ajs:Ajs_2327 N-acetylglutamate synthase~TIGRFAM: Amino-acid N-acetyltransferase (ArgA)~PFAM: Aspartate/glutamate/uridylate kinase; GCN5-related N-acetyltransferase (GNAT) domain inference protein motif:TFAM:TIGR01890 db_xref GO:0004042 db_xref InterPro:IPR000182 db_xref InterPro:IPR001048 db_xref InterPro:IPR010167 2732094 2732441 gene locus_tag Alide2_2610 2732094 2732441 CDS product Endoribonuclease L-PSP transl_table 11 protein_id gb|AEB84967.1||gnl|jgi|Alide2_2610 note PFAM: Endoribonuclease L-PSP~KEGG: bam:Bamb_3393 endoribonuclease L-PSP inference protein motif:PFAM:PF01042 db_xref InterPro:IPR006175 2732468 2733712 gene locus_tag Alide2_2611 2732468 2733712 CDS product D-amino-acid dehydrogenase EC_number 1.4.99.1 transl_table 11 protein_id gb|AEB84968.1||gnl|jgi|Alide2_2611 note KEGG: bam:Bamb_3394 FAD dependent oxidoreductase~PFAM: FAD dependent oxidoreductase inference protein motif:PRIAM:1.4.99.1 db_xref InterPro:IPR006076 2733709 2734485 gene locus_tag Alide2_2612 2733709 2734485 CDS product Asp/Glu/hydantoin racemase transl_table 11 protein_id gb|AEB84969.1||gnl|jgi|Alide2_2612 note PFAM: Asp/Glu/hydantoin racemase~KEGG: vei:Veis_4472 Asp/Glu racemase inference protein motif:PFAM:PF01177 db_xref InterPro:IPR015942 2734547 2735680 gene locus_tag Alide2_2613 2734547 2735680 CDS product Extracellular ligand-binding receptor transl_table 11 protein_id gb|AEB84970.1||gnl|jgi|Alide2_2613 note PFAM: Extracellular ligand-binding receptor~KEGG: vei:Veis_4471 extracellular ligand-binding receptor inference protein motif:PFAM:PF01094 db_xref InterPro:IPR001828 2735736 2736629 gene locus_tag Alide2_2614 2735736 2736629 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB84971.1||gnl|jgi|Alide2_2614 note PFAM: ABC transporter permease~KEGG: vei:Veis_4470 inner-membrane translocator inference protein motif:PFAM:PF02653 db_xref GO:0005215 db_xref InterPro:IPR001851 2736622 2737509 gene locus_tag Alide2_2615 2736622 2737509 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB84972.1||gnl|jgi|Alide2_2615 note PFAM: ABC transporter permease~KEGG: vei:Veis_4469 inner-membrane translocator inference protein motif:PFAM:PF02653 db_xref GO:0005215 db_xref InterPro:IPR001851 2737506 2738288 gene locus_tag Alide2_2616 2737506 2738288 CDS product Phosphonate-transporting ATPase EC_number 3.6.3.28 transl_table 11 protein_id gb|AEB84973.1||gnl|jgi|Alide2_2616 note PFAM: ABC transporter-like~KEGG: vei:Veis_4468 ABC transporter related~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.28 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 2738288 2739007 gene locus_tag Alide2_2617 2738288 2739007 CDS product Polyamine-transporting ATPase EC_number 3.6.3.31 transl_table 11 protein_id gb|AEB84974.1||gnl|jgi|Alide2_2617 note PFAM: ABC transporter-like~KEGG: vei:Veis_4467 ABC transporter related~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.31 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 2739031 2740152 gene locus_tag Alide2_2618 2739031 2740152 CDS product Extracellular ligand-binding receptor transl_table 11 protein_id gb|AEB84975.1||gnl|jgi|Alide2_2618 note PFAM: Extracellular ligand-binding receptor~KEGG: bcm:Bcenmc03_6241 extracellular ligand-binding receptor inference protein motif:PFAM:PF01094 db_xref InterPro:IPR001828 2741125 2740217 gene locus_tag Alide2_2619 2741125 2740217 CDS product dihydrodipicolinate synthase transl_table 11 protein_id gb|AEB84976.1||gnl|jgi|Alide2_2619 note KEGG: tbd:Tbd_1098 dihydrodipicolinate synthase~TIGRFAM: Dihydrodipicolinate synthase subfamily~PFAM: Dihydrodipicolinate synthetase inference protein motif:TFAM:TIGR00674 db_xref GO:0008840 db_xref InterPro:IPR002220 db_xref InterPro:IPR005263 2744690 2741244 gene locus_tag Alide2_2620 2744690 2741244 CDS product Pyruvate/ketoisovalerate oxidoreductase transl_table 11 protein_id gb|AEB84977.1||gnl|jgi|Alide2_2620 note PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain~KEGG: xau:Xaut_0390 indolepyruvate ferredoxin oxidoreductase inference protein motif:PFAM:PF01558 db_xref GO:0005215 db_xref InterPro:IPR019752 2744907 2745689 gene locus_tag Alide2_2621 2744907 2745689 CDS product transcriptional regulator, GntR family transl_table 11 protein_id gb|AEB84978.1||gnl|jgi|Alide2_2621 note KEGG: vei:Veis_4063 GntR family transcriptional regulator~PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR~SMART: GntR, C-terminal; HTH transcriptional regulator, GntR inference protein motif:PFAM:PF07729 db_xref GO:0003700 db_xref InterPro:IPR000524 db_xref InterPro:IPR011711 2747342 2745717 gene locus_tag Alide2_2622 2747342 2745717 CDS product metal dependent phosphohydrolase with GAF sensor transl_table 11 protein_id gb|AEB84979.1||gnl|jgi|Alide2_2622 note KEGG: dar:Daro_3357 hypothetical protein~PFAM: GAF; Metal-dependent phosphohydrolase, HD subdomain~SMART: GAF; Metal-dependent phosphohydrolase, HD domain inference protein motif:PFAM:PF01590 db_xref InterPro:IPR003018 db_xref InterPro:IPR003607 db_xref InterPro:IPR006674 2747967 2747458 gene locus_tag Alide2_2623 2747967 2747458 CDS product Disulfide bond formation protein B transl_table 11 protein_id gb|AEB84980.1||gnl|jgi|Alide2_2623 note KEGG: dia:Dtpsy_1523 disulphide bond formation protein DsbB~HAMAP: Disulphide bond formation protein DsbB~PFAM: Disulphide bond formation protein DsbB/BdbC inference protein motif:HAMAP:MF_00286 db_xref InterPro:IPR003752 db_xref InterPro:IPR022920 2749156 2748029 gene locus_tag Alide2_2624 2749156 2748029 CDS product sulfate ABC transporter, ATPase subunit EC_number 3.6.3.25 transl_table 11 protein_id gb|AEB84981.1||gnl|jgi|Alide2_2624 note SMART: ATPase, AAA+ type, core~TIGRFAM: Sulphate transport system permease protein 1~KEGG: dia:Dtpsy_1522 sulfate ABC transporter, ATPase subunit~PFAM: ABC transporter-like inference protein motif:TFAM:TIGR00968 db_xref GO:0017111 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 db_xref InterPro:IPR005666 2750084 2749191 gene locus_tag Alide2_2625 2750084 2749191 CDS product sulfate ABC transporter, inner membrane subunit CysW transl_table 11 protein_id gb|AEB84982.1||gnl|jgi|Alide2_2625 note KEGG: xtr:100493368 sulfate transport system permease protein cysW-like~TIGRFAM: Sulphate ABC transporter, permease protein CysW; Sulphate ABC transporter permease protein 2~PFAM: Binding-protein-dependent transport systems inner membrane component inference protein motif:TFAM:TIGR02140 db_xref GO:0015116 db_xref GO:0015563 db_xref InterPro:IPR000515 db_xref InterPro:IPR005667 db_xref InterPro:IPR011866 2750947 2750081 gene locus_tag Alide2_2626 2750947 2750081 CDS product sulfate ABC transporter, inner membrane subunit CysT transl_table 11 protein_id gb|AEB84983.1||gnl|jgi|Alide2_2626 note KEGG: xtr:100493198 probable sulfate transport system permease protein cysT-like~TIGRFAM: Sulphate ABC transporter, permease protein CysT; Sulphate ABC transporter permease protein 2~PFAM: Binding-protein-dependent transport systems inner membrane component inference protein motif:TFAM:TIGR02139 db_xref GO:0015116 db_xref GO:0015563 db_xref InterPro:IPR000515 db_xref InterPro:IPR005667 db_xref InterPro:IPR011865 2751953 2750952 gene locus_tag Alide2_2627 2751953 2750952 CDS product sulfate ABC transporter, periplasmic sulfate-binding protein transl_table 11 protein_id gb|AEB84984.1||gnl|jgi|Alide2_2627 note KEGG: dia:Dtpsy_1519 sulfate ABC transporter, periplasmic sulfate-binding protein~TIGRFAM: Thiosulphate-binding protein~PFAM: Bacterial extracellular solute-binding, family 1 inference protein motif:TFAM:TIGR00971 db_xref GO:0015419 db_xref InterPro:IPR005669 db_xref InterPro:IPR006059 2752652 2752062 gene locus_tag Alide2_2628 2752652 2752062 CDS product protein of unknown function DUF1234 transl_table 11 protein_id gb|AEB84985.1||gnl|jgi|Alide2_2628 note PFAM: Protein of unknown function DUF1234~KEGG: aav:Aave_2544 hypothetical protein inference protein motif:PFAM:PF06821 db_xref InterPro:IPR010662 2753657 2752740 gene locus_tag Alide2_2629 2753657 2752740 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB84986.1||gnl|jgi|Alide2_2629 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: dia:Dtpsy_1518 transcriptional regulator, LysR family inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 2753785 2754435 gene locus_tag Alide2_2630 2753785 2754435 CDS product NAD(P)H dehydrogenase (quinone) transl_table 11 protein_id gb|AEB84987.1||gnl|jgi|Alide2_2630 note PFAM: Flavodoxin-like fold~KEGG: dia:Dtpsy_1517 NAD(P)H dehydrogenase (quinone) inference protein motif:PFAM:PF02525 db_xref GO:0009055 db_xref GO:0016491 db_xref GO:0050662 db_xref InterPro:IPR003680 2755089 2754493 gene locus_tag Alide2_2631 2755089 2754493 CDS product NADPH-dependent FMN reductase transl_table 11 protein_id gb|AEB84988.1||gnl|jgi|Alide2_2631 note PFAM: NADPH-dependent FMN reductase~KEGG: dia:Dtpsy_1516 NADPH-dependent FMN reductase inference protein motif:PFAM:PF03358 db_xref InterPro:IPR005025 2755936 2755136 gene locus_tag Alide2_2632 2755936 2755136 CDS product lipoprotein, YaeC family transl_table 11 protein_id gb|AEB84989.1||gnl|jgi|Alide2_2632 note KEGG: dia:Dtpsy_1515 lipoprotein, YaeC family~TIGRFAM: Lipoprotein YaeC~PFAM: NLPA lipoprotein inference protein motif:TFAM:TIGR00363 db_xref InterPro:IPR004478 db_xref InterPro:IPR004872 2756707 2756042 gene locus_tag Alide2_2633 2756707 2756042 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB84990.1||gnl|jgi|Alide2_2633 note PFAM: Binding-protein-dependent transport systems inner membrane component~KEGG: dia:Dtpsy_1513 binding-protein-dependent transport systems inner membrane component inference protein motif:PFAM:PF00528 db_xref GO:0005215 db_xref InterPro:IPR000515 2757750 2756707 gene locus_tag Alide2_2634 2757750 2756707 CDS product Phosphonate-transporting ATPase EC_number 3.6.3.28 transl_table 11 protein_id gb|AEB84991.1||gnl|jgi|Alide2_2634 note PFAM: ABC transporter-like; NIL domain~KEGG: dia:Dtpsy_1512 DL-methionine transporter ATP-binding subunit~SMART: NIL domain; ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.28 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 db_xref InterPro:IPR018449 2758248 2757859 gene locus_tag Alide2_2635 2758248 2757859 CDS product membrane-associated protein in eicosanoid and glutathione metabolism (MAPEG) transl_table 11 protein_id gb|AEB84992.1||gnl|jgi|Alide2_2635 note PFAM: Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein~KEGG: ajs:Ajs_2347 membrane protein-like protein inference protein motif:PFAM:PF01124 db_xref InterPro:IPR001129 2758849 2758259 gene locus_tag Alide2_2636 2758849 2758259 CDS product recombination protein RecR transl_table 11 protein_id gb|AEB84993.1||gnl|jgi|Alide2_2636 note KEGG: dia:Dtpsy_1509 recombination protein RecR~TIGRFAM: RecR protein~SMART: Toprim domain; Helix-hairpin-helix DNA-binding motif, class 1 inference protein motif:TFAM:TIGR00615 db_xref GO:0003677 db_xref InterPro:IPR000093 db_xref InterPro:IPR003583 db_xref InterPro:IPR006171 db_xref InterPro:IPR015967 2759201 2758869 gene locus_tag Alide2_2637 2759201 2758869 CDS product Uncharacterized protein family UPF0133 transl_table 11 protein_id gb|AEB84994.1||gnl|jgi|Alide2_2637 note KEGG: ctt:CtCNB1_1631 hypothetical protein~TIGRFAM: Uncharacterised protein family UPF0133~PFAM: Uncharacterised protein family UPF0133 inference protein motif:TFAM:TIGR00103 db_xref InterPro:IPR004401 2761089 2759233 gene locus_tag Alide2_2638 2761089 2759233 CDS product DNA polymerase III, subunits gamma and tau EC_number 2.7.7.7 transl_table 11 protein_id gb|AEB84995.1||gnl|jgi|Alide2_2638 note SMART: ATPase, AAA+ type, core~TIGRFAM: DNA polymerase III, subunit gamma/ tau~KEGG: dia:Dtpsy_1507 DNA polymerase III, subunits gamma and tau~PFAM: DNA polymerase III, gamma subunit, domain III; ATPase, AAA-type, core inference protein motif:TFAM:TIGR02397 db_xref GO:0003887 db_xref GO:0005524 db_xref InterPro:IPR003593 db_xref InterPro:IPR003959 db_xref InterPro:IPR012763 db_xref InterPro:IPR022754 2761151 2761252 gene gene ffs locus_tag Alide2_R0035 2761151 2761252 ncRNA ncRNA_class SRP_RNA product SRP RNA; RNA component of signal recognition particle 2762099 2761272 gene locus_tag Alide2_2639 2762099 2761272 CDS product transcriptional regulator, ModE family transl_table 11 protein_id gb|AEB84996.1||gnl|jgi|Alide2_2639 note KEGG: gpb:HDN1F_09840 molybdopterin-binding protein~TIGRFAM: Molybdenum-binding protein, N-terminal; Molybdenum-pterin binding~PFAM: Transport-associated OB, type 1; HTH transcriptional regulator, LysR inference protein motif:TFAM:TIGR00637 db_xref GO:0005524 db_xref GO:0015098 db_xref GO:0015412 db_xref GO:0030151 db_xref InterPro:IPR000847 db_xref InterPro:IPR003725 db_xref InterPro:IPR004606 db_xref InterPro:IPR005116 2762987 2762136 gene locus_tag Alide2_2640 2762987 2762136 CDS product modD protein EC_number 2.4.2.19 transl_table 11 protein_id gb|AEB84997.1||gnl|jgi|Alide2_2640 note TIGRFAM: Putative molybdenum utilization protein ModD~KEGG: cli:Clim_0375 ModD protein~PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal inference protein motif:TFAM:TIGR01334 db_xref GO:0015098 db_xref InterPro:IPR002638 db_xref InterPro:IPR006242 db_xref InterPro:IPR022412 2763646 2762984 gene locus_tag Alide2_2641 2763646 2762984 CDS product molybdate ABC transporter, inner membrane subunit transl_table 11 protein_id gb|AEB84998.1||gnl|jgi|Alide2_2641 note KEGG: dac:Daci_3882 binding-protein-dependent transport systems inner membrane component~TIGRFAM: Molybdate ABC transporter, permease protein~PFAM: Binding-protein-dependent transport systems inner membrane component inference protein motif:TFAM:TIGR02141 db_xref GO:0015098 db_xref InterPro:IPR000515 db_xref InterPro:IPR011867 2764363 2763647 gene locus_tag Alide2_2642 2764363 2763647 CDS product molybdenum ABC transporter, periplasmic molybdate-binding protein transl_table 11 protein_id gb|AEB84999.1||gnl|jgi|Alide2_2642 note TIGRFAM: Molybdenum ABC transporter, periplasmic binding protein~KEGG: dac:Daci_3883 molybdenum ABC transporter periplasmic molybdate-binding protein inference protein motif:TFAM:TIGR01256 db_xref GO:0015412 db_xref InterPro:IPR005950 2765178 2764375 gene locus_tag Alide2_2643 2765178 2764375 CDS product protein of unknown function DUF364 transl_table 11 protein_id gb|AEB85000.1||gnl|jgi|Alide2_2643 note PFAM: Protein of unknown function DUF364~KEGG: mta:Moth_1420 hypothetical protein inference protein motif:PFAM:PF04016 db_xref InterPro:IPR007161 2765966 2765172 gene locus_tag Alide2_2644 2765966 2765172 CDS product Methyltransferase type 11 transl_table 11 protein_id gb|AEB85001.1||gnl|jgi|Alide2_2644 note PFAM: Methyltransferase type 11~KEGG: bpt:Bpet1277 hypothetical protein inference protein motif:PFAM:PF08241 db_xref GO:0008168 db_xref InterPro:IPR013216 2766724 2765963 gene locus_tag Alide2_2645 2766724 2765963 CDS product Iron-chelate-transporting ATPase EC_number 3.6.3.34 transl_table 11 protein_id gb|AEB85002.1||gnl|jgi|Alide2_2645 note PFAM: ABC transporter-like~KEGG: dac:Daci_4650 ABC transporter-like protein~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.34 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 2767719 2766721 gene locus_tag Alide2_2646 2767719 2766721 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB85003.1||gnl|jgi|Alide2_2646 note PFAM: ABC transporter permease protein~KEGG: dac:Daci_4649 transport system permease inference protein motif:PFAM:PF01032 db_xref GO:0005215 db_xref InterPro:IPR000522 2768812 2767778 gene locus_tag Alide2_2647 2768812 2767778 CDS product ABC-type transporter, periplasmic subunit transl_table 11 protein_id gb|AEB85004.1||gnl|jgi|Alide2_2647 note PFAM: Periplasmic binding protein~KEGG: ctt:CtCNB1_0597 periplasmic binding protein inference protein motif:PFAM:PF01497 db_xref GO:0005381 db_xref InterPro:IPR002491 2769348 2768809 gene locus_tag Alide2_2648 2769348 2768809 CDS product Protein of unknown function DUF2478 transl_table 11 protein_id gb|AEB85005.1||gnl|jgi|Alide2_2648 note PFAM: Protein of unknown function DUF2478~KEGG: bpt:Bpet1276 hypothetical protein inference protein motif:PFAM:PF10649 db_xref InterPro:IPR018912 2771407 2769428 gene locus_tag Alide2_2649 2771407 2769428 CDS product TonB-dependent receptor plug transl_table 11 protein_id gb|AEB85006.1||gnl|jgi|Alide2_2649 note PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel~KEGG: ctt:CtCNB1_0594 TonB-dependent receptor inference protein motif:PFAM:PF07715 db_xref GO:0004872 db_xref GO:0005215 db_xref InterPro:IPR000531 db_xref InterPro:IPR012910 2771696 2772286 gene locus_tag Alide2_2650 2771696 2772286 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85007.1||gnl|jgi|Alide2_2650 note KEGG: dia:Dtpsy_1506 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_1506 2773644 2772268 gene locus_tag Alide2_2651 2773644 2772268 CDS product uncharacterized flavoprotein, PP_4765 family transl_table 11 protein_id gb|AEB85008.1||gnl|jgi|Alide2_2651 note KEGG: dia:Dtpsy_1505 HI0933 family protein~TIGRFAM: Conserved hyptotheical protein CHP03862, flavoprotein, PP4765; Conserved hypothetical protein CHP00275, flavoprotein HI0933-like~PFAM: Conserved hypothetical protein CHP00275, flavoprotein HI0933-like inference protein motif:TFAM:TIGR03862 db_xref InterPro:IPR004792 db_xref InterPro:IPR022460 2773885 2774769 gene locus_tag Alide2_2652 2773885 2774769 CDS product Pirin domain protein transl_table 11 protein_id gb|AEB85009.1||gnl|jgi|Alide2_2652 note PFAM: Pirin, N-terminal; Pirin, C-terminal~KEGG: bpe:BP2937 hypothetical protein inference protein motif:PFAM:PF02678 db_xref InterPro:IPR003829 db_xref InterPro:IPR008778 2774855 2775736 gene locus_tag Alide2_2653 2774855 2775736 CDS product Pirin domain protein transl_table 11 protein_id gb|AEB85010.1||gnl|jgi|Alide2_2653 note PFAM: Pirin, N-terminal; Pirin, C-terminal~KEGG: pag:PLES_41041 putative pirin protein inference protein motif:PFAM:PF02678 db_xref InterPro:IPR003829 db_xref InterPro:IPR008778 2779030 2775743 gene locus_tag Alide2_2654 2779030 2775743 CDS product UvrD/REP helicase transl_table 11 protein_id gb|AEB85011.1||gnl|jgi|Alide2_2654 note PFAM: DNA helicase, UvrD/REP type~KEGG: dia:Dtpsy_1503 UvrD/REP helicase inference protein motif:PFAM:PF00580 db_xref GO:0003677 db_xref GO:0004003 db_xref GO:0005524 db_xref InterPro:IPR000212 2781590 2779023 gene locus_tag Alide2_2655 2781590 2779023 CDS product exonuclease-like protein transl_table 11 protein_id gb|AEB85012.1||gnl|jgi|Alide2_2655 note KEGG: ajs:Ajs_2356 exonuclease-like protein inference similar to AA sequence:KEGG:Ajs_2356 2781693 2782025 gene locus_tag Alide2_2656 2781693 2782025 CDS product thioredoxin transl_table 11 protein_id gb|AEB85013.1||gnl|jgi|Alide2_2656 note KEGG: vap:Vapar_2323 thioredoxin~TIGRFAM: Thioredoxin~PFAM: Thioredoxin domain inference protein motif:TFAM:TIGR01068 db_xref GO:0009055 db_xref GO:0015035 db_xref InterPro:IPR005746 db_xref InterPro:IPR013766 2782252 2783514 gene locus_tag Alide2_2657 2782252 2783514 CDS product transcription termination factor Rho transl_table 11 protein_id gb|AEB85014.1||gnl|jgi|Alide2_2657 note TIGRFAM: Transcription termination factor Rho~PFAM: ATPase, alpha/beta subunit, nucleotide-binding domain; Rho termination factor, N-terminal; Rho termination factor, RNA-binding~KEGG: ajs:Ajs_2358 transcription termination factor Rho~SMART: Cold shock protein; ATPase, AAA+ type, core; Rho termination factor, N-terminal inference protein motif:TFAM:TIGR00767 db_xref GO:0003715 db_xref GO:0003723 db_xref GO:0005524 db_xref GO:0008186 db_xref InterPro:IPR000194 db_xref InterPro:IPR003593 db_xref InterPro:IPR004665 db_xref InterPro:IPR011112 db_xref InterPro:IPR011113 db_xref InterPro:IPR011129 2783601 2783855 gene locus_tag Alide2_2658 2783601 2783855 CDS product ribosomal protein L31 transl_table 11 protein_id gb|AEB85015.1||gnl|jgi|Alide2_2658 note KEGG: dia:Dtpsy_1495 ribosomal protein L31~TIGRFAM: Ribosomal protein L31~PFAM: Ribosomal protein L31 inference protein motif:TFAM:TIGR00105 db_xref GO:0003735 db_xref InterPro:IPR002150 2783994 2785688 gene locus_tag Alide2_2659 2783994 2785688 CDS product putative inner membrane transmembrane protein transl_table 11 protein_id gb|AEB85016.1||gnl|jgi|Alide2_2659 note KEGG: ajs:Ajs_2364 putative inner membrane transmembrane protein inference similar to AA sequence:KEGG:Ajs_2364 2785688 2787046 gene locus_tag Alide2_2660 2785688 2787046 CDS product MATE efflux family protein transl_table 11 protein_id gb|AEB85017.1||gnl|jgi|Alide2_2660 note KEGG: ajs:Ajs_2365 MATE efflux family protein~TIGRFAM: Multi antimicrobial extrusion protein~PFAM: Multi antimicrobial extrusion protein inference protein motif:TFAM:TIGR00797 db_xref GO:0015238 db_xref GO:0015297 db_xref InterPro:IPR002528 2788385 2787009 gene locus_tag Alide2_2661 2788385 2787009 CDS product PAS/PAC sensor signal transduction histidine kinase transl_table 11 protein_id gb|AEB85018.1||gnl|jgi|Alide2_2661 note TIGRFAM: Signal transduction histidine kinase, phosphate regulon sensor PhoR~PFAM: ATPase-like, ATP-binding domain; PAS fold; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain~KEGG: dia:Dtpsy_1492 PAS/PAC sensor signal transduction histidine kinase~SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS inference protein motif:TFAM:TIGR02966 db_xref GO:0000155 db_xref GO:0004673 db_xref GO:0005515 db_xref InterPro:IPR000014 db_xref InterPro:IPR003594 db_xref InterPro:IPR003661 db_xref InterPro:IPR013767 db_xref InterPro:IPR014310 2789154 2788453 gene locus_tag Alide2_2662 2789154 2788453 CDS product two component transcriptional regulator PhoB, winged helix family transl_table 11 protein_id gb|AEB85019.1||gnl|jgi|Alide2_2662 note TIGRFAM: Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB~PFAM: Signal transduction response regulator, C-terminal; Signal transduction response regulator, receiver domain~KEGG: ajs:Ajs_2367 two component transcriptional regulator~SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal inference protein motif:TFAM:TIGR02154 db_xref GO:0000156 db_xref GO:0003677 db_xref InterPro:IPR001789 db_xref InterPro:IPR001867 db_xref InterPro:IPR011879 2789852 2789151 gene locus_tag Alide2_2663 2789852 2789151 CDS product phosphate uptake regulator, PhoU transl_table 11 protein_id gb|AEB85020.1||gnl|jgi|Alide2_2663 note KEGG: ajs:Ajs_2368 phosphate uptake regulator, PhoU~TIGRFAM: PhoU~PFAM: PhoU inference protein motif:TFAM:TIGR02135 db_xref InterPro:IPR008170 2790637 2789849 gene locus_tag Alide2_2664 2790637 2789849 CDS product phosphate ABC transporter, ATPase subunit EC_number 3.6.3.27 transl_table 11 protein_id gb|AEB85021.1||gnl|jgi|Alide2_2664 note SMART: ATPase, AAA+ type, core; K Homology~TIGRFAM: Phosphate transport system permease protein 1~KEGG: aav:Aave_2629 phosphate ABC transporter, ATPase subunit~PFAM: ABC transporter-like inference protein motif:TFAM:TIGR00972 db_xref GO:0005315 db_xref GO:0015114 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 db_xref InterPro:IPR004087 db_xref InterPro:IPR005670 2791549 2790668 gene locus_tag Alide2_2665 2791549 2790668 CDS product phosphate ABC transporter, inner membrane subunit PstA transl_table 11 protein_id gb|AEB85022.1||gnl|jgi|Alide2_2665 note KEGG: ajs:Ajs_2370 phosphate transporter permease subunit PtsA~TIGRFAM: Phosphate transport system permease protein 2~PFAM: Binding-protein-dependent transport systems inner membrane component inference protein motif:TFAM:TIGR00974 db_xref GO:0005315 db_xref GO:0015114 db_xref InterPro:IPR000515 db_xref InterPro:IPR005672 2792568 2791546 gene locus_tag Alide2_2666 2792568 2791546 CDS product phosphate ABC transporter, inner membrane subunit PstC transl_table 11 protein_id gb|AEB85023.1||gnl|jgi|Alide2_2666 note KEGG: dia:Dtpsy_1487 phosphate ABC transporter, inner membrane subunit PstC~TIGRFAM: Phosphate ABC transporter, permease protein PstC~PFAM: Binding-protein-dependent transport systems inner membrane component inference protein motif:TFAM:TIGR02138 db_xref GO:0005315 db_xref InterPro:IPR000515 db_xref InterPro:IPR011864 2793672 2792632 gene locus_tag Alide2_2667 2793672 2792632 CDS product phosphate ABC transporter, periplasmic phosphate-binding protein transl_table 11 protein_id gb|AEB85024.1||gnl|jgi|Alide2_2667 note KEGG: dia:Dtpsy_1486 phosphate ABC transporter, periplasmic phosphate-binding protein~TIGRFAM: Periplasmic phosphate binding protein~PFAM: Bacterial extracellular solute-binding, family 1 inference protein motif:TFAM:TIGR00975 db_xref GO:0005315 db_xref GO:0015114 db_xref InterPro:IPR005673 db_xref InterPro:IPR006059 2793932 2795413 gene locus_tag Alide2_2668 2793932 2795413 CDS product Ppx/GppA phosphatase EC_number 3.6.1.40 transl_table 11 protein_id gb|AEB85025.1||gnl|jgi|Alide2_2668 note KEGG: dia:Dtpsy_1483 Ppx/GppA phosphatase~PFAM: Ppx/GppA phosphatase inference protein motif:PRIAM:3.6.1.40 db_xref InterPro:IPR003607 db_xref InterPro:IPR003695 2795951 2795490 gene locus_tag Alide2_2669 2795951 2795490 CDS product putative phosphohistidine phosphatase, SixA transl_table 11 protein_id gb|AEB85026.1||gnl|jgi|Alide2_2669 note KEGG: ajs:Ajs_2377 phosphohistidine phosphatase, SixA~PFAM: Histidine phosphatase superfamily, clade-1~SMART: Histidine phosphatase superfamily, clade-1 inference protein motif:PFAM:PF00300 db_xref InterPro:IPR013078 2798125 2795951 gene locus_tag Alide2_2670 2798125 2795951 CDS product Polyphosphate kinase EC_number 2.7.4.1 transl_table 11 protein_id gb|AEB85027.1||gnl|jgi|Alide2_2670 note PFAM: Polyphosphate kinase~TIGRFAM: Polyphosphate kinase~HAMAP: Polyphosphate kinase~KEGG: dia:Dtpsy_1480 polyphosphate kinase inference protein motif:HAMAP:MF_00347 db_xref InterPro:IPR003414 2799206 2798388 gene locus_tag Alide2_2671 2799206 2798388 CDS product ornithine-acyl(acyl carrier protein) N-acyltransferase transl_table 11 protein_id gb|AEB85028.1||gnl|jgi|Alide2_2671 note KEGG: dia:Dtpsy_1479 ornithine-acyl(acyl carrier protein) N-acyltransferase inference similar to AA sequence:KEGG:Dtpsy_1479 2799446 2801239 gene locus_tag Alide2_2672 2799446 2801239 CDS product diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) transl_table 11 protein_id gb|AEB85029.1||gnl|jgi|Alide2_2672 note TIGRFAM: Diguanylate cyclase, predicted; PAS~PFAM: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted~KEGG: ajs:Ajs_2380 diguanylate cyclase/phosphodiesterase~SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS; PAC motif inference protein motif:TFAM:TIGR00254 db_xref GO:0004871 db_xref InterPro:IPR000014 db_xref InterPro:IPR000160 db_xref InterPro:IPR001610 db_xref InterPro:IPR001633 2802665 2801331 gene locus_tag Alide2_2673 2802665 2801331 CDS product phosphoglucosamine mutase EC_number 5.4.2.10 transl_table 11 protein_id gb|AEB85030.1||gnl|jgi|Alide2_2673 note TIGRFAM: Phosphoglucosamine mutase~KEGG: dia:Dtpsy_1477 phosphoglucosamine mutase~PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, C-terminal inference protein motif:TFAM:TIGR01455 db_xref GO:0000287 db_xref GO:0008966 db_xref InterPro:IPR005843 db_xref InterPro:IPR005844 db_xref InterPro:IPR005845 db_xref InterPro:IPR005846 db_xref InterPro:IPR006352 2803551 2802655 gene locus_tag Alide2_2674 2803551 2802655 CDS product dihydropteroate synthase EC_number 2.5.1.15 transl_table 11 protein_id gb|AEB85031.1||gnl|jgi|Alide2_2674 note TIGRFAM: Dihydropteroate synthase~KEGG: ajs:Ajs_2382 dihydropteroate synthase~PFAM: Pterin-binding inference protein motif:TFAM:TIGR01496 db_xref GO:0004156 db_xref InterPro:IPR000489 db_xref InterPro:IPR006390 2805581 2803620 gene locus_tag Alide2_2675 2805581 2803620 CDS product ATP-dependent metalloprotease FtsH EC_number 3.6.4.3 transl_table 11 protein_id gb|AEB85032.1||gnl|jgi|Alide2_2675 note SMART: ATPase, AAA+ type, core~TIGRFAM: Peptidase M41, FtsH~KEGG: dia:Dtpsy_1475 ATP-dependent metalloprotease FtsH~PFAM: Peptidase M41; ATPase, AAA-type, core; Peptidase M41, FtsH extracellular inference protein motif:TFAM:TIGR01241 db_xref GO:0004222 db_xref InterPro:IPR000642 db_xref InterPro:IPR003593 db_xref InterPro:IPR003959 db_xref InterPro:IPR005936 db_xref InterPro:IPR011546 2806341 2805679 gene locus_tag Alide2_2676 2806341 2805679 CDS product ribosomal RNA methyltransferase RrmJ/FtsJ transl_table 11 protein_id gb|AEB85033.1||gnl|jgi|Alide2_2676 note PFAM: Ribosomal RNA methyltransferase RrmJ/FtsJ~KEGG: dia:Dtpsy_1474 ribosomal RNA methyltransferase RrmJ/FtsJ inference protein motif:PFAM:PF01728 db_xref GO:0003676 db_xref GO:0008168 db_xref InterPro:IPR002877 2806362 2806832 gene locus_tag Alide2_2677 2806362 2806832 CDS product protein of unknown function UPF0044 transl_table 11 protein_id gb|AEB85034.1||gnl|jgi|Alide2_2677 note PFAM: RNA-binding, CRM domain~KEGG: dia:Dtpsy_1473 protein of unknown function UPF0044 inference protein motif:PFAM:PF01985 db_xref GO:0003723 db_xref InterPro:IPR001890 2806832 2807575 gene locus_tag Alide2_2678 2806832 2807575 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85035.1||gnl|jgi|Alide2_2678 note KEGG: dac:Daci_4928 hypothetical protein inference similar to AA sequence:KEGG:Daci_4928 2807983 2807576 gene locus_tag Alide2_2679 2807983 2807576 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85036.1||gnl|jgi|Alide2_2679 note KEGG: ajs:Ajs_2388 hypothetical protein inference similar to AA sequence:KEGG:Ajs_2388 2808462 2807986 gene locus_tag Alide2_2680 2808462 2807986 CDS product transcription elongation factor GreA transl_table 11 protein_id gb|AEB85037.1||gnl|jgi|Alide2_2680 note KEGG: dia:Dtpsy_1469 transcription elongation factor GreA~TIGRFAM: Transcription elongation factor GreA~PFAM: Transcription elongation factor, GreA/GreB, N-terminal; Transcription elongation factor, GreA/GreB, C-terminal inference protein motif:TFAM:TIGR01462 db_xref GO:0003677 db_xref GO:0003711 db_xref InterPro:IPR001437 db_xref InterPro:IPR006359 db_xref InterPro:IPR022691 2811840 2808589 gene locus_tag Alide2_2681 2811840 2808589 CDS product carbamoyl-phosphate synthase, large subunit EC_number 6.3.4.16 transl_table 11 protein_id gb|AEB85038.1||gnl|jgi|Alide2_2681 note SMART: Methylglyoxal synthase-like domain~TIGRFAM: Carbamoyl-phosphate synthase, large subunit~KEGG: dia:Dtpsy_1458 carbamoyl-phosphate synthase, large subunit~PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Carbamoyl-phosphate synthetase, large subunit, oligomerisation; Methylglyoxal synthase-like domain; Carbamoyl-phosphate synthase, large subunit, N-terminal inference protein motif:TFAM:TIGR01369 db_xref GO:0004086 db_xref InterPro:IPR005479 db_xref InterPro:IPR005480 db_xref InterPro:IPR005481 db_xref InterPro:IPR006275 db_xref InterPro:IPR011607 2813018 2811840 gene locus_tag Alide2_2682 2813018 2811840 CDS product carbamoyl-phosphate synthase, small subunit EC_number 6.3.5.5 transl_table 11 protein_id gb|AEB85039.1||gnl|jgi|Alide2_2682 note TIGRFAM: Carbamoyl-phosphate synthase, small subunit~KEGG: aav:Aave_2610 carbamoyl-phosphate synthase, small subunit~PFAM: Carbamoyl-phosphate synthase, small subunit, N-terminal; Glutamine amidotransferase class-I, C-terminal inference protein motif:TFAM:TIGR01368 db_xref GO:0004086 db_xref InterPro:IPR000991 db_xref InterPro:IPR002474 db_xref InterPro:IPR006274 2813518 2814939 gene locus_tag Alide2_2683 2813518 2814939 CDS product integrase family protein transl_table 11 protein_id gb|AEB85040.1||gnl|jgi|Alide2_2683 note PFAM: Integrase, catalytic core, phage~KEGG: dar:Daro_2526 phage integrase inference protein motif:PFAM:PF00589 db_xref GO:0003677 db_xref InterPro:IPR002104 2815145 2815390 gene locus_tag Alide2_2684 2815145 2815390 CDS product Prophage CP4-57 regulatory transl_table 11 protein_id gb|AEB85041.1||gnl|jgi|Alide2_2684 note PFAM: Prophage CP4-57 regulatory inference protein motif:PFAM:PF05930 db_xref InterPro:IPR010260 2815527 2815850 gene locus_tag Alide2_2685 2815527 2815850 CDS product transposase IS3/IS911 family protein transl_table 11 protein_id gb|AEB85042.1||gnl|jgi|Alide2_2685 note PFAM: Transposase IS3/IS911family~KEGG: ajs:Ajs_0906 transposase IS3/IS911 family protein inference protein motif:PFAM:PF01527 db_xref GO:0003677 db_xref GO:0004803 db_xref InterPro:IPR002514 2815847 2816762 gene locus_tag Alide2_2686 pseudo 2818170 2816797 gene locus_tag Alide2_2687 2818170 2816797 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85043.1||gnl|jgi|Alide2_2687 note KEGG: sfu:Sfum_1898 hypothetical protein inference similar to AA sequence:KEGG:Sfum_1898 2818476 2819978 gene locus_tag Alide2_2688 2818476 2819978 CDS product integrase family protein transl_table 11 protein_id gb|AEB85044.1||gnl|jgi|Alide2_2688 note PFAM: Integrase, catalytic core, phage~KEGG: ppu:PP_2501 phage integrase, putative inference protein motif:PFAM:PF00589 db_xref GO:0003677 db_xref InterPro:IPR002104 2820958 2820227 gene locus_tag Alide2_2689 2820958 2820227 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85045.1||gnl|jgi|Alide2_2689 note KEGG: pwa:Pecwa_1723 hypothetical protein inference similar to AA sequence:KEGG:Pecwa_1723 2821943 2820960 gene locus_tag Alide2_2690 2821943 2820960 CDS product RimK domain protein ATP-grasp transl_table 11 protein_id gb|AEB85046.1||gnl|jgi|Alide2_2690 note PFAM: ATP-grasp fold, RimK-type~KEGG: psb:Psyr_2651 hypothetical protein inference protein motif:PFAM:PF08443 db_xref InterPro:IPR013651 2822323 2821952 gene locus_tag Alide2_2691 2822323 2821952 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85047.1||gnl|jgi|Alide2_2691 note KEGG: pwa:Pecwa_1721 hypothetical protein inference similar to AA sequence:KEGG:Pecwa_1721 2822904 2822467 gene locus_tag Alide2_2692 2822904 2822467 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85048.1||gnl|jgi|Alide2_2692 inference ab initio prediction:Prodigal:1.4 2824521 2823025 gene locus_tag Alide2_2693 2824521 2823025 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85049.1||gnl|jgi|Alide2_2693 note KEGG: rcu:RCOM_1905080 hypothetical protein inference similar to AA sequence:KEGG:RCOM_1905080 2824924 2824730 gene locus_tag Alide2_2694 pseudo 2825182 2824949 gene locus_tag Alide2_2695 2825182 2824949 CDS product phage transcriptional regulator, AlpA transl_table 11 protein_id gb|AEB85050.1||gnl|jgi|Alide2_2695 note KEGG: dze:Dd1591_3709 phage transcriptional regulator, AlpA~manually curated~PFAM: Prophage CP4-57 regulatory inference protein motif:PFAM:PF05930 db_xref InterPro:IPR010260 2827503 2825746 gene locus_tag Alide2_2696 2827503 2825746 CDS product UvrD/REP helicase transl_table 11 protein_id gb|AEB85051.1||gnl|jgi|Alide2_2696 note PFAM: DNA helicase, UvrD/REP type~KEGG: rpf:Rpic12D_4971 DNA helicase II inference protein motif:PFAM:PF00580 db_xref GO:0003677 db_xref GO:0004003 db_xref GO:0005524 db_xref InterPro:IPR000212 2829509 2827485 gene locus_tag Alide2_2697 2829509 2827485 CDS product ATP-dependent OLD family endonuclease transl_table 11 protein_id gb|AEB85052.1||gnl|jgi|Alide2_2697 note KEGG: rpf:Rpic12D_4970 ATP-dependent OLD family endonuclease inference similar to AA sequence:KEGG:Rpic12D_4970 2829718 2829506 gene locus_tag Alide2_2698 2829718 2829506 CDS product histone family protein DNA-binding protein transl_table 11 protein_id gb|AEB85053.1||gnl|jgi|Alide2_2698 note PFAM: Histone-like bacterial DNA-binding protein~KEGG: pol:Bpro_1551 histone-like DNA-binding protein inference protein motif:PFAM:PF00216 db_xref GO:0003677 db_xref InterPro:IPR000119 2829968 2829795 gene locus_tag Alide2_2699 pseudo 2830032 2830298 gene locus_tag Alide2_2700 2830032 2830298 CDS product transposase IS3/IS911 family protein transl_table 11 protein_id gb|AEB85054.1||gnl|jgi|Alide2_2700 note PFAM: Transposase IS3/IS911family~KEGG: ajs:Ajs_1457 transposase IS3/IS911 family protein inference protein motif:PFAM:PF01527 db_xref GO:0003677 db_xref GO:0004803 db_xref InterPro:IPR002514 2830331 2831161 gene locus_tag Alide2_2701 2830331 2831161 CDS product Integrase catalytic region transl_table 11 protein_id gb|AEB85055.1||gnl|jgi|Alide2_2701 note PFAM: Integrase, catalytic core~KEGG: tin:Tint_1916 integrase catalytic region inference protein motif:PFAM:PF00665 db_xref GO:0003677 db_xref InterPro:IPR001584 2831871 2832119 gene locus_tag Alide2_2702 pseudo 2832817 2832197 gene locus_tag Alide2_2703 2832817 2832197 CDS product Methyltransferase type 12 transl_table 11 protein_id gb|AEB85056.1||gnl|jgi|Alide2_2703 note PFAM: Methyltransferase type 12~KEGG: pol:Bpro_4843 methyltransferase type 12 inference protein motif:PFAM:PF08242 db_xref InterPro:IPR013217 2833543 2833454 gene locus_tag Alide2_2704 pseudo 2833965 2833618 gene locus_tag Alide2_2705 2833965 2833618 CDS product Copper binding periplasmic protein CusF transl_table 11 protein_id gb|AEB85057.1||gnl|jgi|Alide2_2705 note PFAM: Copper binding periplasmic protein CusF~KEGG: ajs:Ajs_2667 hypothetical protein inference protein motif:PFAM:PF11604 db_xref InterPro:IPR021647 2834536 2834045 gene locus_tag Alide2_2706 2834536 2834045 CDS product blue (type 1) copper domain protein transl_table 11 protein_id gb|AEB85058.1||gnl|jgi|Alide2_2706 note PFAM: Blue (type 1) copper domain~KEGG: ajs:Ajs_2668 blue (type1) copper domain-containing protein inference protein motif:PFAM:PF00127 db_xref GO:0005507 db_xref GO:0009055 db_xref InterPro:IPR000923 2835982 2834570 gene locus_tag Alide2_2707 2835982 2834570 CDS product multicopper oxidase type 3 transl_table 11 protein_id gb|AEB85059.1||gnl|jgi|Alide2_2707 note PFAM: Multicopper oxidase, type 3; Multicopper oxidase, type 2~KEGG: ajs:Ajs_2669 multicopper oxidase, type 3 inference protein motif:PFAM:PF07732 db_xref GO:0005507 db_xref GO:0016491 db_xref InterPro:IPR006311 db_xref InterPro:IPR011706 db_xref InterPro:IPR011707 2837429 2835999 gene locus_tag Alide2_2708 2837429 2835999 CDS product outer membrane efflux protein transl_table 11 protein_id gb|AEB85060.1||gnl|jgi|Alide2_2708 note PFAM: Outer membrane efflux protein~KEGG: ajs:Ajs_2670 putative copper resistance-related lipoprotein inference protein motif:PFAM:PF02321 db_xref GO:0005215 db_xref InterPro:IPR003423 2837752 2837426 gene locus_tag Alide2_2709 2837752 2837426 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85061.1||gnl|jgi|Alide2_2709 note KEGG: ajs:Ajs_2671 hypothetical protein inference similar to AA sequence:KEGG:Ajs_2671 2837936 2838244 gene locus_tag Alide2_2710 2837936 2838244 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85062.1||gnl|jgi|Alide2_2710 inference ab initio prediction:Prodigal:1.4 2838501 2838809 gene locus_tag Alide2_2711 2838501 2838809 CDS product Flagellar hook-basal body complex protein fliE transl_table 11 protein_id gb|AEB85063.1||gnl|jgi|Alide2_2711 note TIGRFAM: Flagellar hook-basal body complex protein FliE~HAMAP: Flagellar hook-basal body complex protein FliE~KEGG: ajs:Ajs_2673 flagellar hook-basal body complex subunit FliE~PFAM: Flagellar hook-basal body complex protein FliE inference protein motif:HAMAP:MF_00724 db_xref InterPro:IPR001624 2838985 2840250 gene locus_tag Alide2_2712 2838985 2840250 CDS product acetate kinase EC_number 2.7.2.1 transl_table 11 protein_id gb|AEB85064.1||gnl|jgi|Alide2_2712 note TIGRFAM: Acetate kinase~KEGG: ajs:Ajs_2674 acetate kinase~PFAM: Acetate/butyrate kinase inference protein motif:TFAM:TIGR00016 db_xref GO:0016301 db_xref InterPro:IPR000890 db_xref InterPro:IPR004372 2840464 2840916 gene locus_tag Alide2_2713 2840464 2840916 CDS product transcriptional regulator, MerR family transl_table 11 protein_id gb|AEB85065.1||gnl|jgi|Alide2_2713 note manually curated~PFAM: Transcription regulator MerR, DNA binding; HTH transcriptional regulator, MerR~KEGG: ajs:Ajs_2675 MerR family transcriptional regulator~SMART: HTH transcriptional regulator, MerR inference protein motif:PFAM:PF09278 db_xref GO:0003700 db_xref InterPro:IPR000551 db_xref InterPro:IPR015358 2841069 2842424 gene locus_tag Alide2_2714 2841069 2842424 CDS product Cyclopropane-fatty-acyl-phospholipid synthase EC_number 2.1.1.79 transl_table 11 protein_id gb|AEB85066.1||gnl|jgi|Alide2_2714 note KEGG: ajs:Ajs_2676 cyclopropane-fatty-acyl-phospholipid synthase~PFAM: Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase inference protein motif:PRIAM:2.1.1.79 db_xref InterPro:IPR003333 2842664 2843062 gene locus_tag Alide2_2715 2842664 2843062 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85067.1||gnl|jgi|Alide2_2715 note KEGG: ajs:Ajs_2677 hypothetical protein inference similar to AA sequence:KEGG:Ajs_2677 2843169 2845589 gene locus_tag Alide2_2716 2843169 2845589 CDS product D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase transl_table 11 protein_id gb|AEB85068.1||gnl|jgi|Alide2_2716 note PFAM: Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase; Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal~KEGG: ajs:Ajs_2678 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase inference protein motif:PFAM:PF03894 db_xref GO:0016832 db_xref InterPro:IPR005593 db_xref InterPro:IPR018970 2845695 2846957 gene locus_tag Alide2_2717 2845695 2846957 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85069.1||gnl|jgi|Alide2_2717 note KEGG: ajs:Ajs_2679 hypothetical protein inference similar to AA sequence:KEGG:Ajs_2679 2848066 2847023 gene locus_tag Alide2_2718 2848066 2847023 CDS product glyceraldehyde-3-phosphate dehydrogenase, type II EC_number 1.2.1.59 transl_table 11 protein_id gb|AEB85070.1||gnl|jgi|Alide2_2718 note SMART: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain~TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type II~KEGG: ajs:Ajs_2680 glyceraldehyde-3-phosphate dehydrogenase~PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain inference protein motif:TFAM:TIGR01546 db_xref GO:0008943 db_xref GO:0050661 db_xref GO:0051287 db_xref InterPro:IPR006436 db_xref InterPro:IPR020828 db_xref InterPro:IPR020829 2849713 2848094 gene locus_tag Alide2_2719 2849713 2848094 CDS product ABC-1 domain-containing protein transl_table 11 protein_id gb|AEB85071.1||gnl|jgi|Alide2_2719 note PFAM: ABC-1~KEGG: ajs:Ajs_2681 2-octaprenylphenol hydroxylase inference protein motif:PFAM:PF03109 db_xref InterPro:IPR004147 2850732 2849713 gene locus_tag Alide2_2720 2850732 2849713 CDS product Phosphoglycerate dehydrogenase EC_number 1.1.1.95 transl_table 11 protein_id gb|AEB85072.1||gnl|jgi|Alide2_2720 note KEGG: ajs:Ajs_2682 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding~PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain inference protein motif:PRIAM:1.1.1.95 db_xref InterPro:IPR006139 db_xref InterPro:IPR006140 2851391 2850729 gene locus_tag Alide2_2721 2851391 2850729 CDS product Methyltransferase type 11 transl_table 11 protein_id gb|AEB85073.1||gnl|jgi|Alide2_2721 note PFAM: Methyltransferase type 11~KEGG: ajs:Ajs_2683 methyltransferase type 11 inference protein motif:PFAM:PF08241 db_xref GO:0008168 db_xref InterPro:IPR013216 2852032 2851388 gene locus_tag Alide2_2722 2852032 2851388 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85074.1||gnl|jgi|Alide2_2722 note KEGG: ajs:Ajs_1500 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1500 2852732 2852070 gene locus_tag Alide2_2723 2852732 2852070 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85075.1||gnl|jgi|Alide2_2723 note KEGG: ajs:Ajs_2687 hypothetical protein inference similar to AA sequence:KEGG:Ajs_2687 2853914 2852739 gene locus_tag Alide2_2724 2853914 2852739 CDS product peptidase S1 and S6 chymotrypsin/Hap transl_table 11 protein_id gb|AEB85076.1||gnl|jgi|Alide2_2724 note KEGG: ajs:Ajs_2688 peptidase S1 and S6, chymotrypsin/Hap~PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF~SMART: PDZ/DHR/GLGF inference protein motif:PFAM:PF00089 db_xref GO:0004252 db_xref GO:0005515 db_xref InterPro:IPR001254 db_xref InterPro:IPR001478 2854810 2853911 gene locus_tag Alide2_2725 2854810 2853911 CDS product ribose-phosphate pyrophosphokinase EC_number 2.7.6.1 transl_table 11 protein_id gb|AEB85077.1||gnl|jgi|Alide2_2725 note KEGG: ajs:Ajs_2689 phosphoribosylpyrophosphate synthetase~TIGRFAM: Phosphoribosyl pyrophosphokinase inference protein motif:TFAM:TIGR01251 db_xref GO:0000287 db_xref GO:0004749 db_xref InterPro:IPR005946 2856348 2854807 gene locus_tag Alide2_2726 2856348 2854807 CDS product thymidine phosphorylase EC_number 2.4.2.4 transl_table 11 protein_id gb|AEB85078.1||gnl|jgi|Alide2_2726 note KEGG: ajs:Ajs_2690 thymidine phosphorylase~PFAM: Pyrimidine nucleoside phosphorylase, C-terminal; Glycosyl transferase, family 3~TIGRFAM: Thymidine phosphorylase, type 2~HAMAP: Thymidine phosphorylase, type 2~SMART: Pyrimidine nucleoside phosphorylase, C-terminal inference protein motif:HAMAP:MF_00703 db_xref InterPro:IPR000312 db_xref InterPro:IPR013102 db_xref InterPro:IPR013466 2857703 2856345 gene locus_tag Alide2_2727 2857703 2856345 CDS product beta-lactamase domain protein transl_table 11 protein_id gb|AEB85079.1||gnl|jgi|Alide2_2727 note KEGG: ajs:Ajs_2691 beta-lactamase domain-containing protein~PFAM: Beta-lactamase-like; RNA-metabolising metallo-beta-lactamase~SMART: Beta-lactamase-like inference protein motif:PFAM:PF00753 db_xref GO:0016787 db_xref InterPro:IPR001279 db_xref InterPro:IPR011108 2858226 2857729 gene locus_tag Alide2_2728 2858226 2857729 CDS product protein of unknown function DUF477 transl_table 11 protein_id gb|AEB85080.1||gnl|jgi|Alide2_2728 note PFAM: Protein of unknown function DUF477~KEGG: ajs:Ajs_2692 hypothetical protein inference protein motif:PFAM:PF04536 db_xref InterPro:IPR007621 2859112 2858228 gene locus_tag Alide2_2729 2859112 2858228 CDS product protein of unknown function DUF477 transl_table 11 protein_id gb|AEB85081.1||gnl|jgi|Alide2_2729 note PFAM: Protein of unknown function DUF477~KEGG: ajs:Ajs_2693 hypothetical protein inference protein motif:PFAM:PF04536 db_xref InterPro:IPR007621 2859746 2859135 gene locus_tag Alide2_2730 2859746 2859135 CDS product LemA family protein transl_table 11 protein_id gb|AEB85082.1||gnl|jgi|Alide2_2730 note PFAM: LemA~KEGG: ajs:Ajs_2694 LemA family protein inference protein motif:PFAM:PF04011 db_xref InterPro:IPR007156 2861056 2859743 gene locus_tag Alide2_2731 2861056 2859743 CDS product major facilitator superfamily MFS_1 transl_table 11 protein_id gb|AEB85083.1||gnl|jgi|Alide2_2731 note PFAM: Major facilitator superfamily MFS-1~KEGG: ajs:Ajs_2695 major facilitator superfamily transporter inference protein motif:PFAM:PF07690 db_xref InterPro:IPR011701 2863523 2861076 gene locus_tag Alide2_2732 2863523 2861076 CDS product copper-translocating P-type ATPase EC_number 3.6.3.4 transl_table 11 protein_id gb|AEB85084.1||gnl|jgi|Alide2_2732 note TIGRFAM: ATPase, P type, cation/copper-transporter; ATPase, P-type, heavy metal translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter~KEGG: ajs:Ajs_2696 copper-translocating P-type ATPase~PFAM: ATPase, P-type, ATPase-associated domain; Haloacid dehalogenase-like hydrolase inference protein motif:TFAM:TIGR01511 db_xref GO:0004008 db_xref GO:0005524 db_xref GO:0046873 db_xref InterPro:IPR001757 db_xref InterPro:IPR005834 db_xref InterPro:IPR006403 db_xref InterPro:IPR006416 db_xref InterPro:IPR008250 2864420 2863557 gene locus_tag Alide2_2733 2864420 2863557 CDS product polyphosphate kinase 2 transl_table 11 protein_id gb|AEB85085.1||gnl|jgi|Alide2_2733 note KEGG: ajs:Ajs_2697 hypothetical protein~TIGRFAM: Polyphosphate kinase 2, PA0141~PFAM: Polyphosphate kinase-2-related inference protein motif:TFAM:TIGR03707 db_xref GO:0008976 db_xref InterPro:IPR022486 db_xref InterPro:IPR022488 2864626 2864432 gene locus_tag Alide2_2734 2864626 2864432 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85086.1||gnl|jgi|Alide2_2734 inference ab initio prediction:Prodigal:1.4 2865357 2865800 gene locus_tag Alide2_2735 2865357 2865800 CDS product transcriptional regulator, MerR family transl_table 11 protein_id gb|AEB85087.1||gnl|jgi|Alide2_2735 note manually curated~PFAM: Transcription regulator MerR, DNA binding; HTH transcriptional regulator, MerR~KEGG: ajs:Ajs_2699 MerR family transcriptional regulator~SMART: HTH transcriptional regulator, MerR inference protein motif:PFAM:PF09278 db_xref GO:0003700 db_xref InterPro:IPR000551 db_xref InterPro:IPR015358 2866093 2866443 gene locus_tag Alide2_2736 2866093 2866443 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85088.1||gnl|jgi|Alide2_2736 note KEGG: ajs:Ajs_2700 hypothetical protein inference similar to AA sequence:KEGG:Ajs_2700 2866669 2866908 gene locus_tag Alide2_2737 2866669 2866908 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85089.1||gnl|jgi|Alide2_2737 note KEGG: dac:Daci_0472 hypothetical protein inference similar to AA sequence:KEGG:Daci_0472 2868733 2867084 gene locus_tag Alide2_2738 2868733 2867084 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85090.1||gnl|jgi|Alide2_2738 note KEGG: ajs:Ajs_2702 hypothetical protein inference similar to AA sequence:KEGG:Ajs_2702 2872011 2868832 gene locus_tag Alide2_2739 2872011 2868832 CDS product heavy metal efflux pump, CzcA family transl_table 11 protein_id gb|AEB85091.1||gnl|jgi|Alide2_2739 note KEGG: ajs:Ajs_2703 CzcA family heavy metal efflux protein~TIGRFAM: Heavy metal efflux pump CzcA~PFAM: Acriflavin resistance protein inference protein motif:TFAM:TIGR00914 db_xref GO:0008324 db_xref InterPro:IPR001036 db_xref InterPro:IPR004763 2873640 2872027 gene locus_tag Alide2_2740 2873640 2872027 CDS product efflux transporter, RND family, MFP subunit transl_table 11 protein_id gb|AEB85092.1||gnl|jgi|Alide2_2740 note TIGRFAM: Secretion protein HlyD~KEGG: ajs:Ajs_1482 RND family efflux transporter MFP subunit inference protein motif:TFAM:TIGR01730 db_xref GO:0008565 db_xref InterPro:IPR006143 2874911 2873637 gene locus_tag Alide2_2741 2874911 2873637 CDS product outer membrane efflux protein transl_table 11 protein_id gb|AEB85093.1||gnl|jgi|Alide2_2741 note PFAM: Outer membrane efflux protein~KEGG: ajs:Ajs_1481 outer membrane efflux protein inference protein motif:PFAM:PF02321 db_xref GO:0005215 db_xref InterPro:IPR003423 2875156 2874908 gene locus_tag Alide2_2742 2875156 2874908 CDS product Protein of unknown function DUF2789 transl_table 11 protein_id gb|AEB85094.1||gnl|jgi|Alide2_2742 note PFAM: Protein of unknown function DUF2789~KEGG: ajs:Ajs_1480 hypothetical protein inference protein motif:PFAM:PF10982 db_xref InterPro:IPR021250 2876494 2875214 gene locus_tag Alide2_2743 2876494 2875214 CDS product membrane protein-like protein transl_table 11 protein_id gb|AEB85095.1||gnl|jgi|Alide2_2743 note KEGG: ajs:Ajs_1479 membrane protein-like protein inference similar to AA sequence:KEGG:Ajs_1479 2876646 2876491 gene locus_tag Alide2_2744 2876646 2876491 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85096.1||gnl|jgi|Alide2_2744 note KEGG: dia:Dtpsy_2188 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_2188 2877999 2876953 gene locus_tag Alide2_2745 2877999 2876953 CDS product 40-residue YVTN family beta-propeller repeat protein transl_table 11 protein_id gb|AEB85097.1||gnl|jgi|Alide2_2745 note TIGRFAM: YVTN beta-propeller repeat~KEGG: ajs:Ajs_1471 YVTN beta-propeller repeat-containing protein inference protein motif:TFAM:TIGR02276 db_xref InterPro:IPR011964 2879942 2878104 gene locus_tag Alide2_2746 2879942 2878104 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85098.1||gnl|jgi|Alide2_2746 note KEGG: ajs:Ajs_1470 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1470 2882296 2879963 gene locus_tag Alide2_2747 2882296 2879963 CDS product heavy metal translocating P-type ATPase EC_number 3.6.3.4 transl_table 11 protein_id gb|AEB85099.1||gnl|jgi|Alide2_2747 note SMART: TRASH~TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P type, cation/copper-transporter; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter~KEGG: lbf:LBF_0420 cation transport ATPase~PFAM: ATPase, P-type, ATPase-associated domain; YHS; Haloacid dehalogenase-like hydrolase inference protein motif:TFAM:TIGR01525 db_xref GO:0004008 db_xref GO:0005524 db_xref GO:0046873 db_xref InterPro:IPR001757 db_xref InterPro:IPR005834 db_xref InterPro:IPR006403 db_xref InterPro:IPR006416 db_xref InterPro:IPR007029 db_xref InterPro:IPR008250 db_xref InterPro:IPR011017 2882551 2882300 gene locus_tag Alide2_2748 2882551 2882300 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85100.1||gnl|jgi|Alide2_2748 note KEGG: lbf:LBF_0421 hypothetical protein inference similar to AA sequence:KEGG:LBF_0421 2882929 2882636 gene locus_tag Alide2_2749 2882929 2882636 CDS product Heavy metal transport/detoxification protein transl_table 11 protein_id gb|AEB85101.1||gnl|jgi|Alide2_2749 note KEGG: ajs:Ajs_1467 heavy metal transport/detoxification protein~manually curated~PFAM: Heavy metal transport/detoxification protein inference protein motif:PFAM:PF00403 db_xref GO:0046872 db_xref InterPro:IPR006121 2883648 2882980 gene locus_tag Alide2_2750 2883648 2882980 CDS product Isoprenylcysteine carboxyl methyltransferase transl_table 11 protein_id gb|AEB85102.1||gnl|jgi|Alide2_2750 note PFAM: Isoprenylcysteine carboxyl methyltransferase~KEGG: ajs:Ajs_1466 isoprenylcysteine carboxyl methyltransferase inference protein motif:PFAM:PF04140 db_xref GO:0004671 db_xref InterPro:IPR007269 2883929 2883645 gene locus_tag Alide2_2751 2883929 2883645 CDS product Protein of unknown function DUF2933 transl_table 11 protein_id gb|AEB85103.1||gnl|jgi|Alide2_2751 note KEGG: ajs:Ajs_1465 hypothetical protein~manually curated~PFAM: Protein of unknown function DUF2933 inference protein motif:PFAM:PF11666 db_xref InterPro:IPR021682 2884428 2883955 gene locus_tag Alide2_2752 2884428 2883955 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85104.1||gnl|jgi|Alide2_2752 note KEGG: ajs:Ajs_1464 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1464 2884862 2884518 gene locus_tag Alide2_2753 2884862 2884518 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85105.1||gnl|jgi|Alide2_2753 note KEGG: ajs:Ajs_1463 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1463 2885099 2885764 gene locus_tag Alide2_2754 2885099 2885764 CDS product two component heavy metal response transcriptional regulator, winged helix family transl_table 11 protein_id gb|AEB85106.1||gnl|jgi|Alide2_2754 note TIGRFAM: Signal transduction response regulator, heavy metal response~PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal~KEGG: ajs:Ajs_1461 two component heavy metal response transcriptional regulator~SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal inference protein motif:TFAM:TIGR01387 db_xref GO:0000156 db_xref GO:0003677 db_xref InterPro:IPR001789 db_xref InterPro:IPR001867 db_xref InterPro:IPR006291 2886675 2885761 gene locus_tag Alide2_2755 2886675 2885761 CDS product Integrase catalytic region transl_table 11 protein_id gb|AEB85107.1||gnl|jgi|Alide2_2755 note PFAM: Integrase, catalytic core~KEGG: rpf:Rpic12D_2820 integrase catalytic region inference protein motif:PFAM:PF00665 db_xref GO:0003677 db_xref InterPro:IPR001584 2886995 2886672 gene locus_tag Alide2_2756 2886995 2886672 CDS product transposase IS3/IS911 family protein transl_table 11 protein_id gb|AEB85108.1||gnl|jgi|Alide2_2756 note PFAM: Transposase IS3/IS911family~KEGG: ajs:Ajs_0906 transposase IS3/IS911 family protein inference protein motif:PFAM:PF01527 db_xref GO:0003677 db_xref GO:0004803 db_xref InterPro:IPR002514 2887626 2887180 gene locus_tag Alide2_2757 pseudo 2888161 2887631 gene locus_tag Alide2_2758 2888161 2887631 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85109.1||gnl|jgi|Alide2_2758 note KEGG: dat:HRM2_14600 hypothetical protein inference similar to AA sequence:KEGG:HRM2_14600 2888550 2888161 gene locus_tag Alide2_2759 2888550 2888161 CDS product Domain of unknown function DUF1863 transl_table 11 protein_id gb|AEB85110.1||gnl|jgi|Alide2_2759 note PFAM: MTH538 TIR-like domain~KEGG: hdn:Hden_3446 hypothetical protein inference protein motif:PFAM:PF08937 db_xref InterPro:IPR015032 2890920 2889271 gene locus_tag Alide2_2760 2890920 2889271 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85111.1||gnl|jgi|Alide2_2760 inference ab initio prediction:Prodigal:1.4 2891789 2891349 gene locus_tag Alide2_2761 2891789 2891349 CDS product thioesterase superfamily protein transl_table 11 protein_id gb|AEB85112.1||gnl|jgi|Alide2_2761 note KEGG: vap:Vapar_2079 hypothetical protein~manually curated~PFAM: Thioesterase superfamily inference protein motif:PFAM:PF03061 db_xref InterPro:IPR006683 2892451 2891903 gene locus_tag Alide2_2762 2892451 2891903 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85113.1||gnl|jgi|Alide2_2762 note manually curated~KEGG: ajs:Ajs_1603 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1603 2892894 2892448 gene locus_tag Alide2_2763 2892894 2892448 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85114.1||gnl|jgi|Alide2_2763 note manually curated~KEGG: ajs:Ajs_1602 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1602 2893177 2892902 gene locus_tag Alide2_2764 2893177 2892902 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85115.1||gnl|jgi|Alide2_2764 note KEGG: ajs:Ajs_1601 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1601 2894205 2893174 gene locus_tag Alide2_2765 2894205 2893174 CDS product PRTRC system protein D transl_table 11 protein_id gb|AEB85116.1||gnl|jgi|Alide2_2765 note TIGRFAM: ParB-related, ThiF-related cassette, protein D~KEGG: ajs:Ajs_1600 hypothetical protein inference protein motif:TFAM:TIGR03739 db_xref InterPro:IPR022389 2895406 2896545 gene locus_tag Alide2_2766 2895406 2896545 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85117.1||gnl|jgi|Alide2_2766 note manually curated~KEGG: ajs:Ajs_1599 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1599 2896885 2896556 gene locus_tag Alide2_2767 2896885 2896556 CDS product histone family protein nucleoid-structuring protein H-NS transl_table 11 protein_id gb|AEB85118.1||gnl|jgi|Alide2_2767 note KEGG: ajs:Ajs_1598 nucleoid protein H-NS~PFAM: Histone-like nucleoid-structuring protein H-NS~SMART: Histone-like nucleoid-structuring protein H-NS inference protein motif:PFAM:PF00816 db_xref GO:0003677 db_xref InterPro:IPR001801 2897223 2897014 gene locus_tag Alide2_2768 2897223 2897014 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85119.1||gnl|jgi|Alide2_2768 inference ab initio prediction:Prodigal:1.4 2898067 2897220 gene locus_tag Alide2_2769 pseudo 2898831 2898121 gene locus_tag Alide2_2770 2898831 2898121 CDS product PRTRC system protein A transl_table 11 protein_id gb|AEB85120.1||gnl|jgi|Alide2_2770 note KEGG: ajs:Ajs_1596 hypothetical protein~TIGRFAM: ParB-related, ThiF-related cassette, protein A~PFAM: Domain of unknown function DUF2016 inference protein motif:TFAM:TIGR03735 db_xref InterPro:IPR018560 db_xref InterPro:IPR022499 2899568 2898828 gene locus_tag Alide2_2771 2899568 2898828 CDS product PRTRC system protein B transl_table 11 protein_id gb|AEB85121.1||gnl|jgi|Alide2_2771 note TIGRFAM: ParB-related, ThiF-related cassette, protein B~KEGG: ajs:Ajs_1595 hypothetical protein inference protein motif:TFAM:TIGR03737 db_xref InterPro:IPR022280 2902137 2899588 gene locus_tag Alide2_2772 pseudo 2899937 2901067 gene locus_tag Alide2_2773 2899937 2901067 CDS product putative transposase transl_table 11 protein_id gb|AEB85122.1||gnl|jgi|Alide2_2773 note KEGG: pol:Bpro_2745 putative transposase inference similar to AA sequence:KEGG:Bpro_2745 2901033 2901326 gene locus_tag Alide2_2774 2901033 2901326 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85123.1||gnl|jgi|Alide2_2774 note KEGG: pol:Bpro_2744 hypothetical protein inference similar to AA sequence:KEGG:Bpro_2744 2902592 2902134 gene locus_tag Alide2_2775 2902592 2902134 CDS product ParB-related,ThiF-related cassette, protein C transl_table 11 protein_id gb|AEB85124.1||gnl|jgi|Alide2_2775 note TIGRFAM: ParB-related, ThiF-related cassette, protein C~KEGG: ajs:Ajs_1593 hypothetical protein inference protein motif:TFAM:TIGR03738 db_xref InterPro:IPR022289 2903165 2902689 gene locus_tag Alide2_2776 2903165 2902689 CDS product PRTRC system protein E transl_table 11 protein_id gb|AEB85125.1||gnl|jgi|Alide2_2776 note TIGRFAM: ParB-related, ThiF-related cassette, protein E~KEGG: ajs:Ajs_1592 hypothetical protein inference protein motif:TFAM:TIGR03741 db_xref InterPro:IPR022273 2905056 2903263 gene locus_tag Alide2_2777 2905056 2903263 CDS product PRTRC system ParB family protein transl_table 11 protein_id gb|AEB85126.1||gnl|jgi|Alide2_2777 note TIGRFAM: ParB-related, ThiF-related cassette, ParB; ParB-like partition protein~PFAM: ParB-like nuclease~KEGG: ajs:Ajs_1591 ParB family protein~SMART: ParB-like nuclease inference protein motif:TFAM:TIGR03734 db_xref GO:0003677 db_xref InterPro:IPR003115 db_xref InterPro:IPR004437 db_xref InterPro:IPR022396 2905790 2908777 gene locus_tag Alide2_2778 2905790 2908777 CDS product N-6 DNA methylase transl_table 11 protein_id gb|AEB85127.1||gnl|jgi|Alide2_2778 note PFAM: DNA methylase, adenine-specific~KEGG: hch:HCH_07036 type I restriction-modification system methyltransferase subunit inference protein motif:PFAM:PF02384 db_xref GO:0003677 db_xref GO:0008170 db_xref InterPro:IPR003356 2908790 2909497 gene locus_tag Alide2_2779 2908790 2909497 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85128.1||gnl|jgi|Alide2_2779 note KEGG: hch:HCH_07035 hypothetical protein inference similar to AA sequence:KEGG:HCH_07035 2909821 2912418 gene locus_tag Alide2_2780 2909821 2912418 CDS product DEAD/DEAH box helicase domain protein transl_table 11 protein_id gb|AEB85129.1||gnl|jgi|Alide2_2780 note KEGG: seh:SeHA_C1592 helicase C2~PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal~SMART: DEAD-like helicase, N-terminal; Helicase, ATP-dependent, c2 type inference protein motif:PFAM:PF00270 db_xref GO:0003676 db_xref GO:0005524 db_xref GO:0008026 db_xref InterPro:IPR006555 db_xref InterPro:IPR011545 db_xref InterPro:IPR014001 2914683 2913168 gene locus_tag Alide2_2781 pseudo 2915098 2914766 gene locus_tag Alide2_2782 2915098 2914766 CDS product IS66 Orf2 family protein transl_table 11 protein_id gb|AEB85130.1||gnl|jgi|Alide2_2782 note PFAM: Transposase (putative), IS66 Orf2-like~KEGG: rfr:Rfer_2710 IS66 Orf2 like inference protein motif:PFAM:PF05717 db_xref InterPro:IPR008878 2915523 2915095 gene locus_tag Alide2_2783 2915523 2915095 CDS product transposase IS3/IS911 family protein transl_table 11 protein_id gb|AEB85131.1||gnl|jgi|Alide2_2783 note PFAM: Transposase IS3/IS911family~KEGG: rfr:Rfer_2709 transposase IS3/IS911 inference protein motif:PFAM:PF01527 db_xref GO:0003677 db_xref GO:0004803 db_xref InterPro:IPR002514 2916102 2915578 gene locus_tag Alide2_2784 2916102 2915578 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85132.1||gnl|jgi|Alide2_2784 note KEGG: ajs:Ajs_1561 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1561 2916597 2917199 gene locus_tag Alide2_2785 2916597 2917199 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85133.1||gnl|jgi|Alide2_2785 note KEGG: ajs:Ajs_1560 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1560 2917270 2917518 gene locus_tag Alide2_2786 2917270 2917518 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85134.1||gnl|jgi|Alide2_2786 note KEGG: ajs:Ajs_1559 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1559 2917530 2918108 gene locus_tag Alide2_2787 2917530 2918108 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85135.1||gnl|jgi|Alide2_2787 note KEGG: ajs:Ajs_1558 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1558 2918095 2919099 gene locus_tag Alide2_2788 2918095 2919099 CDS product P4 alpha zinc-binding domain protein transl_table 11 protein_id gb|AEB85136.1||gnl|jgi|Alide2_2788 note KEGG: ajs:Ajs_1556 phage P4 alpha zinc-binding domain-containing protein~PFAM: Phage P4 alpha, zinc-binding~SMART: Phage P4 alpha, zinc-binding inference protein motif:PFAM:PF08273 db_xref GO:0003896 db_xref GO:0004386 db_xref GO:0008270 db_xref InterPro:IPR013237 2919361 2920425 gene locus_tag Alide2_2789 2919361 2920425 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85137.1||gnl|jgi|Alide2_2789 note KEGG: ajs:Ajs_1554 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1554 2921060 2920494 gene locus_tag Alide2_2790 2921060 2920494 CDS product putative phage repressor transl_table 11 protein_id gb|AEB85138.1||gnl|jgi|Alide2_2790 note PFAM: Peptidase S24/S26A/S26B, conserved region~KEGG: ajs:Ajs_1553 putative phage repressor inference protein motif:PFAM:PF00717 db_xref InterPro:IPR019759 2921492 2921806 gene locus_tag Alide2_2791 2921492 2921806 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85139.1||gnl|jgi|Alide2_2791 note KEGG: ajs:Ajs_1552 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1552 2921807 2922457 gene locus_tag Alide2_2792 2921807 2922457 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85140.1||gnl|jgi|Alide2_2792 note KEGG: ajs:Ajs_1551 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1551 2922511 2924274 gene locus_tag Alide2_2793 2922511 2924274 CDS product Relaxase transl_table 11 protein_id gb|AEB85141.1||gnl|jgi|Alide2_2793 note PFAM: Uncharacterised protein family, helicase/relaxase, putative~KEGG: ajs:Ajs_1550 FHA domain-containing protein inference protein motif:PFAM:PF07514 db_xref InterPro:IPR011119 2924276 2926183 gene locus_tag Alide2_2794 2924276 2926183 CDS product conjugative coupling factor TraD, SXT/TOL subfamily transl_table 11 protein_id gb|AEB85142.1||gnl|jgi|Alide2_2794 note TIGRFAM: Conjugative coupling factor TraG/TraD~KEGG: ajs:Ajs_1549 hypothetical protein inference protein motif:TFAM:TIGR03743 db_xref InterPro:IPR022458 2926180 2926803 gene locus_tag Alide2_2795 2926180 2926803 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85143.1||gnl|jgi|Alide2_2795 note KEGG: ajs:Ajs_1548 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1548 2927063 2926818 gene locus_tag Alide2_2796 2927063 2926818 CDS product helix-turn-helix domain protein transl_table 11 protein_id gb|AEB85144.1||gnl|jgi|Alide2_2796 note manually curated~PFAM: Helix-turn-helix type 3~KEGG: ajs:Ajs_1547 helix-turn-helix domain-containing protein~SMART: Helix-turn-helix type 3 inference protein motif:PFAM:PF01381 db_xref GO:0043565 db_xref InterPro:IPR001387 2927186 2927494 gene locus_tag Alide2_2797 2927186 2927494 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85145.1||gnl|jgi|Alide2_2797 note KEGG: ajs:Ajs_1546 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1546 2927647 2928186 gene locus_tag Alide2_2798 2927647 2928186 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85146.1||gnl|jgi|Alide2_2798 note KEGG: ajs:Ajs_1545 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1545 2928361 2928897 gene locus_tag Alide2_2799 2928361 2928897 CDS product Lytic transglycosylase catalytic transl_table 11 protein_id gb|AEB85147.1||gnl|jgi|Alide2_2799 note PFAM: Lytic transglycosylase-like, catalytic~KEGG: ajs:Ajs_1544 lytic transglycosylase, catalytic inference protein motif:PFAM:PF01464 db_xref InterPro:IPR008258 2928894 2929598 gene locus_tag Alide2_2800 2928894 2929598 CDS product OmpA/MotB domain protein transl_table 11 protein_id gb|AEB85148.1||gnl|jgi|Alide2_2800 note PFAM: Outer membrane protein, OmpA/MotB, C-terminal~KEGG: dar:Daro_2312 OmpA/MotB inference protein motif:PFAM:PF00691 db_xref InterPro:IPR006665 2929713 2930075 gene locus_tag Alide2_2801 2929713 2930075 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85149.1||gnl|jgi|Alide2_2801 note KEGG: ajs:Ajs_1542 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1542 2930107 2930406 gene locus_tag Alide2_2802 2930107 2930406 CDS product type IV conjugative transfer system protein TraL transl_table 11 protein_id gb|AEB85150.1||gnl|jgi|Alide2_2802 note KEGG: ajs:Ajs_1541 TraL family protein~TIGRFAM: Type IV conjugative transfer system, protein TraL~PFAM: Type IV conjugative transfer system, protein TraL inference protein motif:TFAM:TIGR02762 db_xref InterPro:IPR009838 2930421 2930987 gene locus_tag Alide2_2803 2930421 2930987 CDS product type IV conjugative transfer system protein TraE transl_table 11 protein_id gb|AEB85151.1||gnl|jgi|Alide2_2803 note TIGRFAM: Pilus assembly TraE~KEGG: ajs:Ajs_1540 plasmid-like conjugative transfer protein TraE inference protein motif:TFAM:TIGR02761 db_xref InterPro:IPR007973 2930974 2931966 gene locus_tag Alide2_2804 2930974 2931966 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85152.1||gnl|jgi|Alide2_2804 note KEGG: ajs:Ajs_1539 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1539 2931963 2933369 gene locus_tag Alide2_2805 2931963 2933369 CDS product TraB pilus assembly family protein transl_table 11 protein_id gb|AEB85153.1||gnl|jgi|Alide2_2805 note KEGG: ajs:Ajs_1538 TraB pilus assembly family protein inference similar to AA sequence:KEGG:Ajs_1538 2933353 2934198 gene locus_tag Alide2_2806 2933353 2934198 CDS product disulfide bond isomerase, DsbC/G transl_table 11 protein_id gb|AEB85154.1||gnl|jgi|Alide2_2806 note PFAM: Disulphide bond isomerase, DsbC/G, N-terminal~KEGG: ajs:Ajs_1537 periplasmic thiol:disulfide interchange protein inference protein motif:PFAM:PF10411 db_xref InterPro:IPR018950 2934195 2934839 gene locus_tag Alide2_2807 2934195 2934839 CDS product type IV conjugative transfer system protein TraV transl_table 11 protein_id gb|AEB85155.1||gnl|jgi|Alide2_2807 note KEGG: ajs:Ajs_1536 hypothetical protein~TIGRFAM: Type IV secretion system, TraV~PFAM: Type IV secretion system, TraV inference protein motif:TFAM:TIGR02747 db_xref InterPro:IPR014118 2934847 2937429 gene locus_tag Alide2_2808 2934847 2937429 CDS product type-IV secretion system protein TraC transl_table 11 protein_id gb|AEB85156.1||gnl|jgi|Alide2_2808 note TIGRFAM: Type-IV secretion system protein TraC~KEGG: ajs:Ajs_1535 hypothetical protein inference protein motif:TFAM:TIGR02746 db_xref InterPro:IPR014117 2937426 2937785 gene locus_tag Alide2_2809 2937426 2937785 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85157.1||gnl|jgi|Alide2_2809 note KEGG: ajs:Ajs_1534 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1534 2937782 2938369 gene locus_tag Alide2_2810 2937782 2938369 CDS product conjugative transfer signal peptidase TraF transl_table 11 protein_id gb|AEB85158.1||gnl|jgi|Alide2_2810 note KEGG: ajs:Ajs_1533 hypothetical protein~TIGRFAM: Peptidase S26C, conjugative transfer signal peptidase TraF~PFAM: Peptidase S26, conserved region inference protein motif:TFAM:TIGR02771 db_xref InterPro:IPR014139 db_xref InterPro:IPR019533 2938381 2938788 gene locus_tag Alide2_2811 2938381 2938788 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85159.1||gnl|jgi|Alide2_2811 note KEGG: ajs:Ajs_1532 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1532 2938785 2939414 gene locus_tag Alide2_2812 2938785 2939414 CDS product type-F conjugative transfer system protein TraW transl_table 11 protein_id gb|AEB85160.1||gnl|jgi|Alide2_2812 note TIGRFAM: Type-F conjugative transfer system protein TraW~KEGG: ajs:Ajs_1531 membrane lipoprotein lipid attachment site inference protein motif:TFAM:TIGR02743 db_xref InterPro:IPR014114 2939411 2940430 gene locus_tag Alide2_2813 2939411 2940430 CDS product TraU family protein transl_table 11 protein_id gb|AEB85161.1||gnl|jgi|Alide2_2813 note PFAM: TraU~KEGG: ajs:Ajs_1530 TraU family protein inference protein motif:PFAM:PF06834 db_xref InterPro:IPR009649 2940417 2941169 gene locus_tag Alide2_2814 2940417 2941169 CDS product type-F conjugative transfer system pilin assembly protein TrbC transl_table 11 protein_id gb|AEB85162.1||gnl|jgi|Alide2_2814 note KEGG: ajs:Ajs_1529 hypothetical protein~TIGRFAM: Type-F conjugative transfer system pilin assembly protein TrbC, subgroup~PFAM: Type-F conjugative transfer system pilin assembly protein TrbC inference protein motif:TFAM:TIGR02742 db_xref InterPro:IPR014113 db_xref InterPro:IPR019106 2941179 2943596 gene locus_tag Alide2_2815 2941179 2943596 CDS product conjugal transfer mating pair stabilization protein TraN transl_table 11 protein_id gb|AEB85163.1||gnl|jgi|Alide2_2815 note KEGG: ajs:Ajs_1528 conjugal transfer mating pair stabilization protein TraN inference similar to AA sequence:KEGG:Ajs_1528 2943593 2943988 gene locus_tag Alide2_2816 2943593 2943988 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85164.1||gnl|jgi|Alide2_2816 note KEGG: ajs:Ajs_1527 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1527 2943996 2944874 gene locus_tag Alide2_2817 2943996 2944874 CDS product TraF-like protein transl_table 11 protein_id gb|AEB85165.1||gnl|jgi|Alide2_2817 note TIGRFAM: Type IV conjugative transfer system protein TraF~KEGG: ajs:Ajs_1526 hypothetical protein inference protein motif:TFAM:TIGR02740 db_xref InterPro:IPR014111 2944884 2946332 gene locus_tag Alide2_2818 2944884 2946332 CDS product TraH family protein transl_table 11 protein_id gb|AEB85166.1||gnl|jgi|Alide2_2818 note PFAM: Type IV conjugative transfer system protein TraH~KEGG: ajs:Ajs_1525 TraH family protein inference protein motif:PFAM:PF06122 db_xref InterPro:IPR010927 2946354 2949128 gene locus_tag Alide2_2819 2946354 2949128 CDS product TraG domain-containing protein transl_table 11 protein_id gb|AEB85167.1||gnl|jgi|Alide2_2819 note PFAM: TraG-like, N-terminal~KEGG: ajs:Ajs_1524 TraG domain-containing protein inference protein motif:PFAM:PF07916 db_xref InterPro:IPR012931 2949469 2949134 gene locus_tag Alide2_2820 2949469 2949134 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85168.1||gnl|jgi|Alide2_2820 note KEGG: ajs:Ajs_1521 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1521 2949955 2951064 gene locus_tag Alide2_2821 2949955 2951064 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85169.1||gnl|jgi|Alide2_2821 inference ab initio prediction:Prodigal:1.4 2951033 2951890 gene locus_tag Alide2_2822 2951033 2951890 CDS product Trypsin EC_number 3.4.21.4 transl_table 11 protein_id gb|AEB85170.1||gnl|jgi|Alide2_2822 note PFAM: Peptidase S1/S6, chymotrypsin/Hap~KEGG: mmu:16621 kallikrein B, plasma 1~SMART: Peptidase S1/S6, chymotrypsin/Hap inference protein motif:PRIAM:3.4.21.4 db_xref InterPro:IPR001254 2952228 2952152 gene locus_tag Alide2_R0036 note tRNA-Pro2 2952228 2952152 tRNA product tRNA-Pro 2952687 2952262 gene locus_tag Alide2_2823 2952687 2952262 CDS product transcriptional regulator, MerR family transl_table 11 protein_id gb|AEB85171.1||gnl|jgi|Alide2_2823 note KEGG: dia:Dtpsy_1455 transcriptional regulator, MerR family~PFAM: HTH transcriptional regulator, MerR~SMART: HTH transcriptional regulator, MerR inference protein motif:PFAM:PF00376 db_xref GO:0003700 db_xref InterPro:IPR000551 2953140 2952787 gene locus_tag Alide2_2824 2953140 2952787 CDS product integration host factor, alpha subunit transl_table 11 protein_id gb|AEB85172.1||gnl|jgi|Alide2_2824 note TIGRFAM: Integration host factor, alpha subunit~PFAM: Histone-like bacterial DNA-binding protein~KEGG: dia:Dtpsy_1454 integration host factor subunit alpha~SMART: Histone-like bacterial DNA-binding protein inference protein motif:TFAM:TIGR00987 db_xref GO:0003677 db_xref InterPro:IPR000119 db_xref InterPro:IPR005684 2955581 2953137 gene locus_tag Alide2_2825 2955581 2953137 CDS product Phenylalanyl-tRNA synthetase beta chain transl_table 11 protein_id gb|AEB85173.1||gnl|jgi|Alide2_2825 note TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial~KEGG: ajs:Ajs_2395 phenylalanyl-tRNA synthetase subunit beta~HAMAP: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial inference protein motif:HAMAP:MF_00283 db_xref InterPro:IPR002547 db_xref InterPro:IPR004532 db_xref InterPro:IPR005121 db_xref InterPro:IPR005146 db_xref InterPro:IPR005147 2956757 2955705 gene locus_tag Alide2_2826 2956757 2955705 CDS product phenylalanyl-tRNA synthetase, alpha subunit transl_table 11 protein_id gb|AEB85174.1||gnl|jgi|Alide2_2826 note KEGG: dia:Dtpsy_1452 phenylalanyl-tRNA synthetase subunit alpha~TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, alpha subunit~PFAM: Phenylalanyl-tRNA synthetase; Phenylalanyl-tRNA synthetase, class II, N-terminal inference protein motif:TFAM:TIGR00468 db_xref GO:0000166 db_xref GO:0004826 db_xref GO:0005524 db_xref InterPro:IPR002319 db_xref InterPro:IPR004188 db_xref InterPro:IPR004529 2957218 2956859 gene locus_tag Alide2_2827 2957218 2956859 CDS product 50S ribosomal protein L20 transl_table 11 protein_id gb|AEB85175.1||gnl|jgi|Alide2_2827 note TIGRFAM: Ribosomal protein L20~HAMAP: Ribosomal protein L20~KEGG: ajs:Ajs_2397 50S ribosomal protein L20~PFAM: Ribosomal protein L20 inference protein motif:HAMAP:MF_00382 db_xref InterPro:IPR005813 2957448 2957245 gene locus_tag Alide2_2828 2957448 2957245 CDS product ribosomal protein L35 transl_table 11 protein_id gb|AEB85176.1||gnl|jgi|Alide2_2828 note KEGG: aav:Aave_2857 50S ribosomal protein L35~TIGRFAM: Ribosomal protein L35, non-mitochondrial~PFAM: Ribosomal protein L35 inference protein motif:TFAM:TIGR00001 db_xref GO:0003735 db_xref InterPro:IPR001706 db_xref InterPro:IPR021137 2958223 2957624 gene locus_tag Alide2_2829 2958223 2957624 CDS product Translation initiation factor IF-3 transl_table 11 protein_id gb|AEB85177.1||gnl|jgi|Alide2_2829 note PFAM: Translation initiation factor 3, C-terminal; Translation initiation factor 3, N-terminal~manually curated~TIGRFAM: Translation initiation factor 3~KEGG: ajs:Ajs_2399 translation initiation factor 3~HAMAP: Translation initiation factor 3 inference protein motif:HAMAP:MF_00080 db_xref InterPro:IPR001288 db_xref InterPro:IPR019814 db_xref InterPro:IPR019815 2960221 2958302 gene locus_tag Alide2_2830 2960221 2958302 CDS product threonyl-tRNA synthetase transl_table 11 protein_id gb|AEB85178.1||gnl|jgi|Alide2_2830 note TIGRFAM: Threonyl-tRNA synthetase, class IIa~PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; Threonyl/alanyl tRNA synthetase, SAD; TGS; Anticodon-binding~KEGG: ajs:Ajs_2400 threonyl-tRNA synthetase~SMART: Threonyl/alanyl tRNA synthetase, SAD inference protein motif:TFAM:TIGR00418 db_xref GO:0004829 db_xref GO:0005524 db_xref InterPro:IPR002314 db_xref InterPro:IPR002320 db_xref InterPro:IPR004095 db_xref InterPro:IPR004154 db_xref InterPro:IPR012947 2961491 2960580 gene locus_tag Alide2_2831 2961491 2960580 CDS product GreA/GreB family elongation factor transl_table 11 protein_id gb|AEB85179.1||gnl|jgi|Alide2_2831 note PFAM: GCN5-related N-acetyltransferase (GNAT) domain~KEGG: bbr:BB4124 putative enzyme-regulator fusion protein inference protein motif:PFAM:PF00583 db_xref GO:0008080 db_xref InterPro:IPR000182 2963243 2961912 gene locus_tag Alide2_2832 2963243 2961912 CDS product isocitrate lyase EC_number 4.1.3.1 transl_table 11 protein_id gb|AEB85180.1||gnl|jgi|Alide2_2832 note TIGRFAM: Isocitrate lyase~KEGG: dia:Dtpsy_1447 isocitrate lyase~PFAM: Isocitrate lyase/phosphorylmutase inference protein motif:TFAM:TIGR01346 db_xref GO:0004451 db_xref InterPro:IPR000918 db_xref InterPro:IPR006254 2963509 2964528 gene locus_tag Alide2_2833 2963509 2964528 CDS product protein of unknown function DUF6 transmembrane transl_table 11 protein_id gb|AEB85181.1||gnl|jgi|Alide2_2833 note PFAM: Drug/metabolite transporter~KEGG: ajs:Ajs_2402 hypothetical protein inference protein motif:PFAM:PF00892 db_xref InterPro:IPR000620 2964685 2964966 gene locus_tag Alide2_2834 2964685 2964966 CDS product SWIB/MDM2 domain-containing protein transl_table 11 protein_id gb|AEB85182.1||gnl|jgi|Alide2_2834 note KEGG: dia:Dtpsy_1444 SWIB/MDM2 domain protein~PFAM: SWIB/MDM2 domain~SMART: SWIB domain inference protein motif:PFAM:PF02201 db_xref InterPro:IPR003121 db_xref InterPro:IPR019835 2965161 2965433 gene locus_tag Alide2_2835 2965161 2965433 CDS product BFD domain protein (2Fe-2S)-binding domain protein transl_table 11 protein_id gb|AEB85183.1||gnl|jgi|Alide2_2835 note KEGG: dia:Dtpsy_1443 BFD domain protein (2Fe-2S)-binding domain protein~manually curated~PFAM: BFD-like [2Fe-2S]-binding domain inference protein motif:PFAM:PF04324 db_xref InterPro:IPR007419 2965589 2966251 gene locus_tag Alide2_2836 2965589 2966251 CDS product TonB family protein transl_table 11 protein_id gb|AEB85184.1||gnl|jgi|Alide2_2836 note KEGG: dia:Dtpsy_1442 TonB family protein~TIGRFAM: TonB, C-terminal~PFAM: TonB, C-terminal inference protein motif:TFAM:TIGR01352 db_xref GO:0008565 db_xref InterPro:IPR006260 2966267 2966986 gene locus_tag Alide2_2837 2966267 2966986 CDS product MotA/TolQ/ExbB proton channel transl_table 11 protein_id gb|AEB85185.1||gnl|jgi|Alide2_2837 note PFAM: MotA/TolQ/ExbB proton channel~KEGG: dia:Dtpsy_1441 MotA/TolQ/ExbB proton channel inference protein motif:PFAM:PF01618 db_xref GO:0008565 db_xref InterPro:IPR002898 2966993 2967403 gene locus_tag Alide2_2838 2966993 2967403 CDS product Biopolymer transport protein ExbD/TolR transl_table 11 protein_id gb|AEB85186.1||gnl|jgi|Alide2_2838 note PFAM: Biopolymer transport protein ExbD/TolR~KEGG: ajs:Ajs_2408 biopolymer transport protein ExbD/TolR inference protein motif:PFAM:PF02472 db_xref GO:0005215 db_xref InterPro:IPR003400 2967499 2967726 gene locus_tag Alide2_2839 2967499 2967726 CDS product Hemin uptake protein hemP transl_table 11 protein_id gb|AEB85187.1||gnl|jgi|Alide2_2839 note PFAM: Hemin uptake protein HemP~KEGG: ajs:Ajs_2409 hypothetical protein inference protein motif:PFAM:PF10636 db_xref InterPro:IPR019600 2968361 2967954 gene locus_tag Alide2_2840 2968361 2967954 CDS product protein of unknown function DUF336 transl_table 11 protein_id gb|AEB85188.1||gnl|jgi|Alide2_2840 note PFAM: Domain of unknown function DUF336~KEGG: dia:Dtpsy_1438 protein of unknown function DUF336 inference protein motif:PFAM:PF03928 db_xref InterPro:IPR005624 2968580 2969269 gene locus_tag Alide2_2841 2968580 2969269 CDS product protein of unknown function UPF0005 transl_table 11 protein_id gb|AEB85189.1||gnl|jgi|Alide2_2841 note PFAM: Inhibitor of apoptosis-promoting Bax1-related~KEGG: dia:Dtpsy_1437 protein of unknown function UPF0005 inference protein motif:PFAM:PF01027 db_xref InterPro:IPR006214 2969388 2969891 gene locus_tag Alide2_2842 2969388 2969891 CDS product regulatory protein MarR transl_table 11 protein_id gb|AEB85190.1||gnl|jgi|Alide2_2842 note KEGG: rme:Rmet_3623 MarR family transcriptional regulator~PFAM: HTH transcriptional regulator, MarR~SMART: HTH transcriptional regulator, MarR inference protein motif:PFAM:PF01047 db_xref GO:0003700 db_xref InterPro:IPR000835 2969888 2971321 gene locus_tag Alide2_2843 2969888 2971321 CDS product major facilitator superfamily MFS_1 transl_table 11 protein_id gb|AEB85191.1||gnl|jgi|Alide2_2843 note PFAM: Major facilitator superfamily MFS-1~KEGG: reu:Reut_B5563 major facilitator transporter inference protein motif:PFAM:PF07690 db_xref InterPro:IPR011701 2971375 2971758 gene locus_tag Alide2_2844 2971375 2971758 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85192.1||gnl|jgi|Alide2_2844 note KEGG: ajs:Ajs_2412 hypothetical protein inference similar to AA sequence:KEGG:Ajs_2412 2972123 2971791 gene locus_tag Alide2_2845 2972123 2971791 CDS product small multidrug resistance protein transl_table 11 protein_id gb|AEB85193.1||gnl|jgi|Alide2_2845 note PFAM: Small multidrug resistance protein~KEGG: dia:Dtpsy_1617 small multidrug resistance protein inference protein motif:PFAM:PF00893 db_xref InterPro:IPR000390 2972338 2972928 gene locus_tag Alide2_2846 2972338 2972928 CDS product Chromate transporter transl_table 11 protein_id gb|AEB85194.1||gnl|jgi|Alide2_2846 note PFAM: Chromate transporter~KEGG: dia:Dtpsy_1615 chromate transporter inference protein motif:PFAM:PF02417 db_xref GO:0015109 db_xref InterPro:IPR003370 2972931 2973524 gene locus_tag Alide2_2847 2972931 2973524 CDS product Chromate transporter transl_table 11 protein_id gb|AEB85195.1||gnl|jgi|Alide2_2847 note PFAM: Chromate transporter~KEGG: dia:Dtpsy_1614 chromate transporter inference protein motif:PFAM:PF02417 db_xref GO:0015109 db_xref InterPro:IPR003370 2974373 2973546 gene locus_tag Alide2_2848 2974373 2973546 CDS product NAD-dependent deacetylase transl_table 11 protein_id gb|AEB85196.1||gnl|jgi|Alide2_2848 note KEGG: dia:Dtpsy_1612 silent information regulator protein Sir2~HAMAP: NAD-dependent histone deacetylase, silent information regulator Sir2~PFAM: NAD-dependent histone deacetylase, silent information regulator Sir2 inference protein motif:HAMAP:MF_01121 db_xref InterPro:IPR003000 2975060 2974395 gene locus_tag Alide2_2849 2975060 2974395 CDS product regulatory protein TetR transl_table 11 protein_id gb|AEB85197.1||gnl|jgi|Alide2_2849 note PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal~KEGG: dia:Dtpsy_1611 regulatory protein TetR inference protein motif:PFAM:PF00440 db_xref GO:0003700 db_xref InterPro:IPR001647 2975144 2975497 gene locus_tag Alide2_2850 2975144 2975497 CDS product protein of unknown function DUF1428 transl_table 11 protein_id gb|AEB85198.1||gnl|jgi|Alide2_2850 note PFAM: Protein of unknown function DUF1428~KEGG: dia:Dtpsy_1610 protein of unknown function DUF1428 inference protein motif:PFAM:PF07237 db_xref InterPro:IPR009874 2975542 2975889 gene locus_tag Alide2_2851 2975542 2975889 CDS product glutathione-dependent formaldehyde-activating GFA transl_table 11 protein_id gb|AEB85199.1||gnl|jgi|Alide2_2851 note PFAM: Glutathione-dependent formaldehyde-activating, GFA~KEGG: pol:Bpro_2417 glutathione-dependent formaldehyde-activating, GFA inference protein motif:PFAM:PF04828 db_xref GO:0016846 db_xref InterPro:IPR006913 2975983 2976435 gene locus_tag Alide2_2852 2975983 2976435 CDS product 3-demethylubiquinone-9 3-methyltransferase transl_table 11 protein_id gb|AEB85200.1||gnl|jgi|Alide2_2852 note KEGG: ajs:Ajs_2265 3-demethylubiquinone-9 3-methyltransferase inference similar to AA sequence:KEGG:Ajs_2265 2976468 2976914 gene locus_tag Alide2_2853 2976468 2976914 CDS product Activator of Hsp90 ATPase 1 family protein transl_table 11 protein_id gb|AEB85201.1||gnl|jgi|Alide2_2853 note PFAM: Activator of Hsp90 ATPase homologue 1-like~KEGG: dia:Dtpsy_1608 activator of HSP90 ATPase 1 family protein inference protein motif:PFAM:PF08327 db_xref InterPro:IPR013538 2976950 2977435 gene locus_tag Alide2_2854 2976950 2977435 CDS product 3-demethylubiquinone-9 3-methyltransferase transl_table 11 protein_id gb|AEB85202.1||gnl|jgi|Alide2_2854 note KEGG: gur:Gura_0848 3-demethylubiquinone-9 3-methyltransferase inference similar to AA sequence:KEGG:Gura_0848 2977558 2977941 gene locus_tag Alide2_2855 2977558 2977941 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85203.1||gnl|jgi|Alide2_2855 note KEGG: dac:Daci_4029 hypothetical protein inference similar to AA sequence:KEGG:Daci_4029 2977948 2978406 gene locus_tag Alide2_2856 2977948 2978406 CDS product Activator of Hsp90 ATPase 1 family protein transl_table 11 protein_id gb|AEB85204.1||gnl|jgi|Alide2_2856 note PFAM: Activator of Hsp90 ATPase homologue 1-like~KEGG: dar:Daro_2725 hypothetical protein inference protein motif:PFAM:PF08327 db_xref InterPro:IPR013538 2979159 2978413 gene locus_tag Alide2_2857 2979159 2978413 CDS product RNA methyltransferase, TrmH family, group 3 transl_table 11 protein_id gb|AEB85205.1||gnl|jgi|Alide2_2857 note TIGRFAM: RNA methyltransferase TrmH, group 3~PFAM: tRNA/rRNA methyltransferase, SpoU; RNA 2-O ribose methyltransferase, substrate binding~KEGG: dia:Dtpsy_1606 RNA methyltransferase, TrmH family, group 3~SMART: RNA 2-O ribose methyltransferase, substrate binding inference protein motif:TFAM:TIGR00186 db_xref GO:0008173 db_xref InterPro:IPR001537 db_xref InterPro:IPR004441 db_xref InterPro:IPR013123 2979302 2980513 gene locus_tag Alide2_2858 2979302 2980513 CDS product Serine/threonine transporter sstT transl_table 11 protein_id gb|AEB85206.1||gnl|jgi|Alide2_2858 note KEGG: dia:Dtpsy_1605 serine/threonine transporter SstT~HAMAP: Serine/threonine transporter SstT~PFAM: Sodium:dicarboxylate symporter inference protein motif:HAMAP:MF_01582 db_xref InterPro:IPR001991 db_xref InterPro:IPR023025 2981269 2980547 gene locus_tag Alide2_2859 2981269 2980547 CDS product Phosphonate-transporting ATPase EC_number 3.6.3.28 transl_table 11 protein_id gb|AEB85207.1||gnl|jgi|Alide2_2859 note PFAM: ABC transporter-like~KEGG: dia:Dtpsy_1604 ABC transporter related~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.28 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 2981294 2981941 gene locus_tag Alide2_2860 2981294 2981941 CDS product Arylesterase EC_number 3.1.1.2 transl_table 11 protein_id gb|AEB85208.1||gnl|jgi|Alide2_2860 note KEGG: dia:Dtpsy_1603 lipolytic protein G-D-S-L family~PFAM: Lipase, GDSL inference protein motif:PRIAM:3.1.1.2 db_xref InterPro:IPR001087 2982785 2981955 gene locus_tag Alide2_2861 2982785 2981955 CDS product Protein of unknown function DUF2189, transmembrane transl_table 11 protein_id gb|AEB85209.1||gnl|jgi|Alide2_2861 note PFAM: Protein of unknown function DUF2189, transmembrane~KEGG: dia:Dtpsy_1602 integral membrane protein inference protein motif:PFAM:PF09955 db_xref InterPro:IPR018692 2984127 2982898 gene locus_tag Alide2_2862 2984127 2982898 CDS product Cystathionine beta-lyase EC_number 4.4.1.8 transl_table 11 protein_id gb|AEB85210.1||gnl|jgi|Alide2_2862 note KEGG: dia:Dtpsy_1601 Cys/Met metabolism pyridoxal-phosphate-dependent protein~PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme inference protein motif:PRIAM:4.4.1.8 db_xref InterPro:IPR000277 2984603 2984148 gene locus_tag Alide2_2863 2984603 2984148 CDS product transport-associated protein transl_table 11 protein_id gb|AEB85211.1||gnl|jgi|Alide2_2863 note KEGG: dia:Dtpsy_1600 transport-associated~PFAM: Transport-associated~SMART: Transport-associated and nodulation domain, bacteria inference protein motif:PFAM:PF04972 db_xref InterPro:IPR007055 db_xref InterPro:IPR014004 2984730 2986415 gene locus_tag Alide2_2864 2984730 2986415 CDS product sulphate transporter transl_table 11 protein_id gb|AEB85212.1||gnl|jgi|Alide2_2864 note PFAM: Sulphate transporter; Sulphate transporter/antisigma-factor antagonist STAS~KEGG: ajs:Ajs_2275 sulphate transporter inference protein motif:PFAM:PF00916 db_xref GO:0005215 db_xref InterPro:IPR002645 db_xref InterPro:IPR011547 2986452 2987225 gene locus_tag Alide2_2865 2986452 2987225 CDS product diguanylate cyclase transl_table 11 protein_id gb|AEB85213.1||gnl|jgi|Alide2_2865 note TIGRFAM: Diguanylate cyclase, predicted~PFAM: Diguanylate cyclase, predicted~KEGG: dia:Dtpsy_1598 diguanylate cyclase~SMART: Diguanylate cyclase, predicted inference protein motif:TFAM:TIGR00254 db_xref InterPro:IPR000160 2987236 2988105 gene locus_tag Alide2_2866 2987236 2988105 CDS product Cobyrinic acid ac-diamide synthase transl_table 11 protein_id gb|AEB85214.1||gnl|jgi|Alide2_2866 note PFAM: Cobyrinic acid a,c-diamide synthase~KEGG: dia:Dtpsy_1597 cobyrinic acid ac-diamide synthase inference protein motif:PFAM:PF01656 db_xref InterPro:IPR002586 2990080 2988176 gene locus_tag Alide2_2867 2990080 2988176 CDS product propionate/CoA ligase EC_number 6.2.1.17 transl_table 11 protein_id gb|AEB85215.1||gnl|jgi|Alide2_2867 note TIGRFAM: Propionate--CoA ligase~KEGG: dia:Dtpsy_1825 propionyl-CoA synthetase~PFAM: AMP-dependent synthetase/ligase inference protein motif:TFAM:TIGR02316 db_xref GO:0050218 db_xref InterPro:IPR000873 db_xref InterPro:IPR012694 2990809 2990201 gene locus_tag Alide2_2868 2990809 2990201 CDS product isochorismatase hydrolase transl_table 11 protein_id gb|AEB85216.1||gnl|jgi|Alide2_2868 note PFAM: Isochorismatase-like~KEGG: dia:Dtpsy_1824 isochorismatase hydrolase inference protein motif:PFAM:PF00857 db_xref GO:0003824 db_xref InterPro:IPR000868 2991976 2990873 gene locus_tag Alide2_2869 2991976 2990873 CDS product glucose sorbosone dehydrogenase transl_table 11 protein_id gb|AEB85217.1||gnl|jgi|Alide2_2869 note KEGG: dia:Dtpsy_1823 glucose sorbosone dehydrogenase inference similar to AA sequence:KEGG:Dtpsy_1823 db_xref InterPro:IPR001258 db_xref InterPro:IPR012938 2993036 2992122 gene locus_tag Alide2_2870 2993036 2992122 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB85218.1||gnl|jgi|Alide2_2870 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: dia:Dtpsy_1814 transcriptional regulator, LysR family inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 2993167 2994684 gene locus_tag Alide2_2871 2993167 2994684 CDS product methylmalonate-semialdehyde dehydrogenase EC_number 1.2.1.27 transl_table 11 protein_id gb|AEB85219.1||gnl|jgi|Alide2_2871 note TIGRFAM: Methylmalonate-semialdehyde dehydrogenase~KEGG: ajs:Ajs_2009 methylmalonate-semialdehyde dehydrogenase [acylating]~PFAM: Aldehyde dehydrogenase domain inference protein motif:TFAM:TIGR01722 db_xref GO:0004491 db_xref InterPro:IPR010061 db_xref InterPro:IPR015590 2994681 2995079 gene locus_tag Alide2_2872 2994681 2995079 CDS product protein of unknown function DUF1311 transl_table 11 protein_id gb|AEB85220.1||gnl|jgi|Alide2_2872 note PFAM: Protein of unknown function DUF1311~KEGG: ajs:Ajs_2008 hypothetical protein inference protein motif:PFAM:PF07007 db_xref InterPro:IPR009739 2995105 2996271 gene locus_tag Alide2_2873 2995105 2996271 CDS product Butyryl-CoA dehydrogenase EC_number 1.3.8.1 transl_table 11 protein_id gb|AEB85221.1||gnl|jgi|Alide2_2873 note KEGG: ajs:Ajs_2007 acyl-CoA dehydrogenase domain-containing protein~PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain inference protein motif:PRIAM:1.3.99.2 db_xref InterPro:IPR006090 db_xref InterPro:IPR006091 db_xref InterPro:IPR006092 2996339 2996725 gene locus_tag Alide2_2874 2996339 2996725 CDS product TfoX domain-containing protein transl_table 11 protein_id gb|AEB85222.1||gnl|jgi|Alide2_2874 note PFAM: TfoX, N-terminal~KEGG: dia:Dtpsy_1810 hypothetical protein inference protein motif:PFAM:PF04993 db_xref InterPro:IPR007076 2996756 2997652 gene locus_tag Alide2_2875 2996756 2997652 CDS product 3-hydroxyisobutyrate dehydrogenase EC_number 1.1.1.31 transl_table 11 protein_id gb|AEB85223.1||gnl|jgi|Alide2_2875 note TIGRFAM: 3-hydroxyisobutyrate dehydrogenase~KEGG: dia:Dtpsy_1809 3-hydroxyisobutyrate dehydrogenase~PFAM: 6-phosphogluconate dehydrogenase, NAD-binding inference protein motif:TFAM:TIGR01692 db_xref GO:0008442 db_xref GO:0051287 db_xref InterPro:IPR006115 db_xref InterPro:IPR011548 2997815 2998648 gene locus_tag Alide2_2876 2997815 2998648 CDS product methyltransferase FkbM family transl_table 11 protein_id gb|AEB85224.1||gnl|jgi|Alide2_2876 note TIGRFAM: Methyltransferase FkbM~KEGG: ter:Tery_1754 FkbM family methyltransferase inference protein motif:TFAM:TIGR01444 db_xref InterPro:IPR006342 2998918 2999088 gene locus_tag Alide2_2877 2998918 2999088 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85225.1||gnl|jgi|Alide2_2877 note manually curated~KEGG: har:HEAR0421 hypothetical protein inference similar to AA sequence:KEGG:HEAR0421 2999535 2999146 gene locus_tag Alide2_2878 2999535 2999146 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85226.1||gnl|jgi|Alide2_2878 note KEGG: dia:Dtpsy_1801 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_1801 2999673 3000881 gene locus_tag Alide2_2879 2999673 3000881 CDS product tryptophan synthase, beta subunit EC_number 4.2.1.20 transl_table 11 protein_id gb|AEB85227.1||gnl|jgi|Alide2_2879 note TIGRFAM: Tryptophan synthase, beta chain~KEGG: dia:Dtpsy_1800 tryptophan synthase subunit beta~PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit inference protein motif:TFAM:TIGR00263 db_xref GO:0004834 db_xref InterPro:IPR001926 db_xref InterPro:IPR006654 3000909 3001247 gene locus_tag Alide2_2880 3000909 3001247 CDS product protein of unknown function DUF469 transl_table 11 protein_id gb|AEB85228.1||gnl|jgi|Alide2_2880 note PFAM: Protein of unknown function DUF469~KEGG: dia:Dtpsy_1799 protein of unknown function DUF469 inference protein motif:PFAM:PF04320 db_xref InterPro:IPR007416 3002904 3001324 gene locus_tag Alide2_2881 3002904 3001324 CDS product galactarate dehydratase EC_number 4.2.1.42 transl_table 11 protein_id gb|AEB85229.1||gnl|jgi|Alide2_2881 note SMART: SAF domain~TIGRFAM: Galactarate dehydratase~KEGG: ajs:Ajs_1998 galactarate dehydratase~PFAM: D-galactarate dehydratase/Altronate hydrolase, C-terminal; SAF domain inference protein motif:TFAM:TIGR03248 db_xref InterPro:IPR007392 db_xref InterPro:IPR013974 db_xref InterPro:IPR017654 3003943 3002945 gene locus_tag Alide2_2882 3003943 3002945 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85230.1||gnl|jgi|Alide2_2882 note KEGG: ajs:Ajs_1997 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1997 db_xref InterPro:IPR005064 3005263 3003968 gene locus_tag Alide2_2883 3005263 3003968 CDS product Glucarate dehydratase EC_number 4.2.1.40 transl_table 11 protein_id gb|AEB85231.1||gnl|jgi|Alide2_2883 note PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; Mandelate racemase/muconate lactonizing enzyme, N-terminal~KEGG: ctt:CtCNB1_0239 mandelate racemase/muconate lactonizing~SMART: Mandelate racemase/muconate lactonizing enzyme, C-terminal inference protein motif:PRIAM:4.2.1.40 db_xref InterPro:IPR013341 db_xref InterPro:IPR013342 3005269 3006102 gene locus_tag Alide2_2884 3005269 3006102 CDS product GntR domain protein transl_table 11 protein_id gb|AEB85232.1||gnl|jgi|Alide2_2884 note KEGG: ctt:CtCNB1_0240 GntR-like protein~PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR~SMART: GntR, C-terminal; HTH transcriptional regulator, GntR inference protein motif:PFAM:PF07729 db_xref GO:0003700 db_xref InterPro:IPR000524 db_xref InterPro:IPR011711 3006195 3007181 gene locus_tag Alide2_2885 3006195 3007181 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85233.1||gnl|jgi|Alide2_2885 note KEGG: dia:Dtpsy_1794 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_1794 db_xref InterPro:IPR005064 3007253 3008164 gene locus_tag Alide2_2886 3007253 3008164 CDS product 5-dehydro-4-deoxyglucarate dehydratase EC_number 4.2.1.41 transl_table 11 protein_id gb|AEB85234.1||gnl|jgi|Alide2_2886 note PFAM: Dihydrodipicolinate synthetase~TIGRFAM: 5-dehydro-4-deoxyglucarate dehydratase~HAMAP: 5-dehydro-4-deoxyglucarate dehydratase~KEGG: dia:Dtpsy_1793 5-dehydro-4-deoxyglucarate dehydratase inference protein motif:HAMAP:MF_00694 db_xref InterPro:IPR002220 db_xref InterPro:IPR017655 3008238 3009191 gene locus_tag Alide2_2887 3008238 3009191 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85235.1||gnl|jgi|Alide2_2887 note KEGG: ajs:Ajs_1992 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1992 db_xref InterPro:IPR005064 3009203 3010195 gene locus_tag Alide2_2888 3009203 3010195 CDS product Glyoxylate reductase EC_number 1.1.1.26 transl_table 11 protein_id gb|AEB85236.1||gnl|jgi|Alide2_2888 note KEGG: ajs:Ajs_1991 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding~PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain inference protein motif:PRIAM:1.1.1.26 db_xref InterPro:IPR006139 db_xref InterPro:IPR006140 3010227 3011564 gene locus_tag Alide2_2889 3010227 3011564 CDS product Glucarate dehydratase EC_number 4.2.1.40 transl_table 11 protein_id gb|AEB85237.1||gnl|jgi|Alide2_2889 note PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; Mandelate racemase/muconate lactonizing enzyme, N-terminal~KEGG: dia:Dtpsy_1790 glucarate dehydratase~SMART: Mandelate racemase/muconate lactonizing enzyme, C-terminal inference protein motif:PRIAM:4.2.1.40 db_xref InterPro:IPR013341 db_xref InterPro:IPR013342 3011636 3013084 gene locus_tag Alide2_2890 3011636 3013084 CDS product Aldehyde Dehydrogenase transl_table 11 protein_id gb|AEB85238.1||gnl|jgi|Alide2_2890 note PFAM: Aldehyde dehydrogenase domain~KEGG: ctt:CtCNB1_0246 aldehyde dehydrogenase inference protein motif:PFAM:PF00171 db_xref GO:0016491 db_xref InterPro:IPR015590 3013154 3013906 gene locus_tag Alide2_2891 3013154 3013906 CDS product Leucyl/phenylalanyl-tRNA--protein transferase EC_number 2.3.2.6 transl_table 11 protein_id gb|AEB85239.1||gnl|jgi|Alide2_2891 note PFAM: Leucyl/phenylalanyl-tRNA-protein transferase~TIGRFAM: Leucyl/phenylalanyl-tRNA-protein transferase~HAMAP: Leucyl/phenylalanyl-tRNA-protein transferase~KEGG: dia:Dtpsy_1788 leucyl/phenylalanyl-tRNA--protein transferase inference protein motif:HAMAP:MF_00688 db_xref InterPro:IPR004616 3013903 3014646 gene locus_tag Alide2_2892 3013903 3014646 CDS product arginyl-tRNA--protein transferase transl_table 11 protein_id gb|AEB85240.1||gnl|jgi|Alide2_2892 note KEGG: dia:Dtpsy_1787 arginyl-tRNA-protein transferase~HAMAP: Arginine-tRNA-protein transferase, predicted, prokaryotic~PFAM: Arginine-tRNA-protein transferase, C-terminal; Arginine-tRNA-protein transferase, N-terminal inference protein motif:HAMAP:MF_00689 db_xref InterPro:IPR007471 db_xref InterPro:IPR007472 db_xref InterPro:IPR017138 3015420 3014719 gene locus_tag Alide2_2893 3015420 3014719 CDS product Pirin domain protein transl_table 11 protein_id gb|AEB85241.1||gnl|jgi|Alide2_2893 note PFAM: Pirin, N-terminal~KEGG: ajs:Ajs_1985 pirin domain-containing protein inference protein motif:PFAM:PF02678 db_xref InterPro:IPR003829 3015532 3016467 gene locus_tag Alide2_2894 3015532 3016467 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB85242.1||gnl|jgi|Alide2_2894 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: dia:Dtpsy_1784 transcriptional regulator, LysR family inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 3016542 3017636 gene locus_tag Alide2_2895 3016542 3017636 CDS product amine oxidase transl_table 11 protein_id gb|AEB85243.1||gnl|jgi|Alide2_2895 note PFAM: Amine oxidase~KEGG: ajs:Ajs_1983 FAD dependent oxidoreductase inference protein motif:PFAM:PF01593 db_xref InterPro:IPR002937 3017633 3018598 gene locus_tag Alide2_2896 3017633 3018598 CDS product Glutamyl-Q tRNA(Asp) synthetase EC_number 6.1.1.17 transl_table 11 protein_id gb|AEB85244.1||gnl|jgi|Alide2_2896 note PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain~TIGRFAM: Glutamyl-Q tRNA(Asp) synthetase~HAMAP: Glutamyl-Q tRNA(Asp) synthetase~KEGG: ajs:Ajs_1982 glutamate--tRNA ligase inference protein motif:HAMAP:MF_01428 db_xref InterPro:IPR020058 db_xref InterPro:IPR022380 3018556 3019329 gene locus_tag Alide2_2897 3018556 3019329 CDS product tRNA (guanine-N(7)-)-methyltransferase transl_table 11 protein_id gb|AEB85245.1||gnl|jgi|Alide2_2897 note TIGRFAM: tRNA (guanine-N-7) methyltransferase~HAMAP: tRNA (guanine-N-7) methyltransferase~KEGG: dia:Dtpsy_1781 tRNA (guanine-N(7)-)-methyltransferase~PFAM: tRNA (guanine-N-7) methyltransferase inference protein motif:HAMAP:MF_01057 db_xref InterPro:IPR003358 3019358 3020362 gene locus_tag Alide2_2898 3019358 3020362 CDS product diguanylate cyclase transl_table 11 protein_id gb|AEB85246.1||gnl|jgi|Alide2_2898 note TIGRFAM: Diguanylate cyclase, predicted~PFAM: Diguanylate cyclase, predicted~KEGG: dia:Dtpsy_1780 diguanylate cyclase~SMART: Diguanylate cyclase, predicted inference protein motif:TFAM:TIGR00254 db_xref InterPro:IPR000160 3023034 3020413 gene locus_tag Alide2_2899 3023034 3020413 CDS product alanyl-tRNA synthetase transl_table 11 protein_id gb|AEB85247.1||gnl|jgi|Alide2_2899 note TIGRFAM: Alanyl-tRNA synthetase, class IIc~PFAM: Alanyl-tRNA synthetase, class IIc, N-terminal; Threonyl/alanyl tRNA synthetase, SAD; Phosphoesterase, DHHA1~KEGG: dia:Dtpsy_1779 alanyl-tRNA synthetase~SMART: Threonyl/alanyl tRNA synthetase, SAD inference protein motif:TFAM:TIGR00344 db_xref GO:0000166 db_xref InterPro:IPR002318 db_xref InterPro:IPR003156 db_xref InterPro:IPR012947 db_xref InterPro:IPR018164 3023254 3024168 gene locus_tag Alide2_2900 3023254 3024168 CDS product Dihydrodipicolinate synthase EC_number 4.2.1.52 transl_table 11 protein_id gb|AEB85248.1||gnl|jgi|Alide2_2900 note KEGG: vap:Vapar_5222 dihydrodipicolinate synthetase~PFAM: Dihydrodipicolinate synthetase inference protein motif:PRIAM:4.2.1.52 db_xref InterPro:IPR002220 3024189 3024824 gene locus_tag Alide2_2901 3024189 3024824 CDS product Tripartite ATP-independent periplasmic transporter DctQ component transl_table 11 protein_id gb|AEB85249.1||gnl|jgi|Alide2_2901 note PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component~KEGG: ctt:CtCNB1_4596 tripartite ATP-independent periplasmic inference protein motif:PFAM:PF04290 db_xref InterPro:IPR007387 3024842 3026107 gene locus_tag Alide2_2902 3024842 3026107 CDS product TRAP dicarboxylate transporter, DctM subunit transl_table 11 protein_id gb|AEB85250.1||gnl|jgi|Alide2_2902 note KEGG: ctt:CtCNB1_4595 TRAP dicarboxylate transporter, DctM subunit~TIGRFAM: TRAP dicarboxylate transporter, DctM subunit~PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit inference protein motif:TFAM:TIGR00786 db_xref InterPro:IPR004681 db_xref InterPro:IPR010656 3026133 3027119 gene locus_tag Alide2_2903 3026133 3027119 CDS product Extracellular solute-binding protein, family 7 transl_table 11 protein_id gb|AEB85251.1||gnl|jgi|Alide2_2903 note PFAM: Extracellular solute-binding protein, family 7, bacteria~KEGG: ctt:CtCNB1_4594 TRAP dicarboxylate transporter, DctP subunit inference protein motif:PFAM:PF03480 db_xref InterPro:IPR006311 db_xref InterPro:IPR018389 3027178 3028212 gene locus_tag Alide2_2904 3027178 3028212 CDS product Malate dehydrogenase EC_number 1.1.1.37 transl_table 11 protein_id gb|AEB85252.1||gnl|jgi|Alide2_2904 note KEGG: bpd:BURPS668_A0565 malate/L-lactate dehydrogenase family protein~PFAM: Malate/L-lactate dehydrogenase inference protein motif:PRIAM:1.1.1.37 db_xref InterPro:IPR003767 3028287 3028961 gene locus_tag Alide2_2905 3028287 3028961 CDS product transcriptional regulator, GntR family transl_table 11 protein_id gb|AEB85253.1||gnl|jgi|Alide2_2905 note KEGG: vap:Vapar_5216 transcriptional regulator, GntR family~PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR~SMART: HTH transcriptional regulator, GntR; GntR, C-terminal inference protein motif:PFAM:PF07729 db_xref GO:0003700 db_xref InterPro:IPR000524 db_xref InterPro:IPR011711 3028985 3029935 gene locus_tag Alide2_2906 3028985 3029935 CDS product pseudouridine synthase transl_table 11 protein_id gb|AEB85254.1||gnl|jgi|Alide2_2906 note PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F~KEGG: dia:Dtpsy_1777 pseudouridine synthase inference protein motif:PFAM:PF00849 db_xref GO:0003723 db_xref GO:0009982 db_xref InterPro:IPR006145 3032615 3029910 gene locus_tag Alide2_2907 3032615 3029910 CDS product GCN5-related N-acetyltransferase transl_table 11 protein_id gb|AEB85255.1||gnl|jgi|Alide2_2907 note PFAM: GCN5-related N-acetyltransferase (GNAT) domain~KEGG: dia:Dtpsy_1832 GCN5-related N-acetyltransferase inference protein motif:PFAM:PF00583 db_xref GO:0008080 db_xref InterPro:IPR000182 3034005 3032662 gene locus_tag Alide2_2908 3034005 3032662 CDS product Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein transl_table 11 protein_id gb|AEB85256.1||gnl|jgi|Alide2_2908 note PFAM: Three-deoxy-D-manno-octulosonic-acid transferase, N-terminal~KEGG: dia:Dtpsy_1831 3-deoxy-D-manno-octulosonic-acid transferase domain protein inference protein motif:PFAM:PF04413 db_xref GO:0005529 db_xref GO:0016740 db_xref InterPro:IPR007507 3035414 3034026 gene locus_tag Alide2_2909 3035414 3034026 CDS product Phosphoglucomutase EC_number 5.4.2.2 transl_table 11 protein_id gb|AEB85257.1||gnl|jgi|Alide2_2909 note KEGG: dia:Dtpsy_1830 phosphomannomutase~PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal inference protein motif:PRIAM:5.4.2.2 db_xref InterPro:IPR005843 db_xref InterPro:IPR005844 db_xref InterPro:IPR005845 db_xref InterPro:IPR005846 3036454 3035483 gene locus_tag Alide2_2910 3036454 3035483 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85258.1||gnl|jgi|Alide2_2910 note KEGG: dac:Daci_0982 hypothetical protein inference similar to AA sequence:KEGG:Daci_0982 db_xref InterPro:IPR005064 db_xref InterPro:IPR006311 3037441 3036467 gene locus_tag Alide2_2911 3037441 3036467 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85259.1||gnl|jgi|Alide2_2911 note KEGG: vei:Veis_0062 hypothetical protein inference similar to AA sequence:KEGG:Veis_0062 db_xref InterPro:IPR005064 3038342 3037536 gene locus_tag Alide2_2912 3038342 3037536 CDS product KduI/IolB isomerase transl_table 11 protein_id gb|AEB85260.1||gnl|jgi|Alide2_2912 note PFAM: KduI/IolB isomerase~KEGG: rsc:RCFBP_20182 myo-inositol catabolism protein, protein IolB inference protein motif:PFAM:PF04962 db_xref GO:0016740 db_xref InterPro:IPR021120 3040294 3038339 gene locus_tag Alide2_2913 3040294 3038339 CDS product 5-dehydro-2-deoxygluconokinase EC_number 2.7.1.92 transl_table 11 protein_id gb|AEB85261.1||gnl|jgi|Alide2_2913 note KEGG: dac:Daci_0985 ribokinase-like domain-containing protein~PFAM: Protein of unknown function DUF2090; Carbohydrate/purine kinase inference protein motif:PRIAM:2.7.1.92 db_xref InterPro:IPR011611 db_xref InterPro:IPR018659 3040389 3041261 gene locus_tag Alide2_2914 3040389 3041261 CDS product transcriptional regulator, RpiR family transl_table 11 protein_id gb|AEB85262.1||gnl|jgi|Alide2_2914 note PFAM: Sugar isomerase (SIS); Helix-turn-helix protein RpiR~KEGG: dac:Daci_0986 RpiR family transcriptional regulator inference protein motif:PFAM:PF01380 db_xref GO:0003700 db_xref GO:0005529 db_xref InterPro:IPR000281 db_xref InterPro:IPR001347 3041323 3042822 gene locus_tag Alide2_2915 3041323 3042822 CDS product DNA repair protein and transcriptional regulator, AraC family transl_table 11 protein_id gb|AEB85263.1||gnl|jgi|Alide2_2915 note KEGG: ajs:Ajs_2020 DNA-O6-methylguanine--protein-cysteine S-methyltransferase / DNA-3-methyladenine glycosylase II / transcriptional regulator Ada~PFAM: AlkA, N-terminal; Ada DNA repair, metal-binding; HTH transcriptional regulator, AraC; HhH-GPD domain~SMART: Helix-turn-helix, AraC type, DNA binding domain; HhH-GPD domain inference protein motif:PFAM:PF06029 db_xref GO:0003677 db_xref GO:0003700 db_xref GO:0008168 db_xref GO:0008270 db_xref GO:0043565 db_xref InterPro:IPR000005 db_xref InterPro:IPR003265 db_xref InterPro:IPR004026 db_xref InterPro:IPR010316 db_xref InterPro:IPR018060 3042881 3043408 gene locus_tag Alide2_2916 3042881 3043408 CDS product methylated-DNA/protein-cysteine methyltransferase transl_table 11 protein_id gb|AEB85264.1||gnl|jgi|Alide2_2916 note KEGG: dia:Dtpsy_1828 methylated-DNA/protein-cysteine methyltransferase~TIGRFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding~PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding inference protein motif:TFAM:TIGR00589 db_xref GO:0003824 db_xref InterPro:IPR014048 3043405 3044328 gene locus_tag Alide2_2917 3043405 3044328 CDS product protein of unknown function DUF6 transmembrane transl_table 11 protein_id gb|AEB85265.1||gnl|jgi|Alide2_2917 note PFAM: Drug/metabolite transporter~KEGG: dia:Dtpsy_1827 protein of unknown function DUF6 transmembrane inference protein motif:PFAM:PF00892 db_xref InterPro:IPR000620 3045310 3044348 gene locus_tag Alide2_2918 3045310 3044348 CDS product adenylate/guanylate cyclase transl_table 11 protein_id gb|AEB85266.1||gnl|jgi|Alide2_2918 note KEGG: aav:Aave_3080 putative adenylate/guanylate cyclase~PFAM: Adenylyl cyclase class-3/4/guanylyl cyclase; Forkhead-associated (FHA) domain~SMART: Forkhead-associated (FHA) domain; Adenylyl cyclase class-3/4/guanylyl cyclase inference protein motif:PFAM:PF00211 db_xref GO:0016849 db_xref InterPro:IPR000253 db_xref InterPro:IPR001054 3046487 3045516 gene locus_tag Alide2_2919 3046487 3045516 CDS product Muramoyltetrapeptide carboxypeptidase EC_number 3.4.17.13 transl_table 11 protein_id gb|AEB85267.1||gnl|jgi|Alide2_2919 note KEGG: dia:Dtpsy_1593 muramoyltetrapeptide carboxypeptidase~PFAM: Peptidase S66, LD-carboxypeptidase A inference protein motif:PRIAM:3.4.17.13 db_xref InterPro:IPR003507 3047547 3046471 gene locus_tag Alide2_2920 3047547 3046471 CDS product CMP/dCMP deaminase zinc-binding protein transl_table 11 protein_id gb|AEB85268.1||gnl|jgi|Alide2_2920 note PFAM: CMP/dCMP deaminase, zinc-binding; Alpha/beta hydrolase fold-1~KEGG: ajs:Ajs_2282 CMP/dCMP deaminase, zinc-binding inference protein motif:PFAM:PF00383 db_xref GO:0008270 db_xref GO:0016787 db_xref InterPro:IPR000073 db_xref InterPro:IPR002125 3048227 3047595 gene locus_tag Alide2_2921 3048227 3047595 CDS product FMN-binding negative transcriptional regulator transl_table 11 protein_id gb|AEB85269.1||gnl|jgi|Alide2_2921 note PFAM: Negative transcriptional regulator~KEGG: vap:Vapar_2794 FMN-binding negative transcriptional regulator inference protein motif:PFAM:PF04299 db_xref InterPro:IPR007396 3048280 3050253 gene locus_tag Alide2_2922 3048280 3050253 CDS product peptidase U32 transl_table 11 protein_id gb|AEB85270.1||gnl|jgi|Alide2_2922 note PFAM: Peptidase U32~KEGG: dia:Dtpsy_1589 peptidase U32 inference protein motif:PFAM:PF01136 db_xref GO:0008233 db_xref InterPro:IPR001539 3050339 3051616 gene locus_tag Alide2_2923 3050339 3051616 CDS product O-acetylhomoserine/O-acetylserine sulfhydrylase EC_number 2.5.1.47 transl_table 11 protein_id gb|AEB85271.1||gnl|jgi|Alide2_2923 note TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase~KEGG: dia:Dtpsy_1588 O-acetylhomoserine/O-acetylserine sulfhydrylase~PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme inference protein motif:TFAM:TIGR01326 db_xref GO:0016849 db_xref InterPro:IPR000277 db_xref InterPro:IPR006235 3052961 3051666 gene locus_tag Alide2_2924 3052961 3051666 CDS product Conserved hypothetical protein CHP03440 transl_table 11 protein_id gb|AEB85272.1||gnl|jgi|Alide2_2924 note KEGG: dia:Dtpsy_1587 protein of unknown function DUF323~TIGRFAM: Conserved hypothetical protein CHP03440~PFAM: Sulphatase-modifying factor inference protein motif:TFAM:TIGR03440 db_xref InterPro:IPR005532 db_xref InterPro:IPR017806 3053949 3052975 gene locus_tag Alide2_2925 3053949 3052975 CDS product methyltransferase transl_table 11 protein_id gb|AEB85273.1||gnl|jgi|Alide2_2925 note KEGG: dia:Dtpsy_1586 methyltransferase~TIGRFAM: Methyltransferase-like~PFAM: Protein of unknown function DUF2260 inference protein motif:TFAM:TIGR03438 db_xref InterPro:IPR017804 db_xref InterPro:IPR019257 3054789 3054199 gene locus_tag Alide2_2926 3054789 3054199 CDS product OmpW family protein transl_table 11 protein_id gb|AEB85274.1||gnl|jgi|Alide2_2926 note KEGG: dia:Dtpsy_1585 OmpW family protein~manually curated~PFAM: Outer membrane protein, OmpW inference protein motif:PFAM:PF03922 db_xref InterPro:IPR005618 3055926 3054934 gene locus_tag Alide2_2927 3055926 3054934 CDS product protein of unknown function DUF808 transl_table 11 protein_id gb|AEB85275.1||gnl|jgi|Alide2_2927 note PFAM: Protein of unknown function DUF808~KEGG: ajs:Ajs_2290 hypothetical protein inference protein motif:PFAM:PF05661 db_xref InterPro:IPR008526 3060049 3056030 gene locus_tag Alide2_2928 3060049 3056030 CDS product phosphoribosylformylglycinamidine synthase EC_number 6.3.5.3 transl_table 11 protein_id gb|AEB85276.1||gnl|jgi|Alide2_2928 note TIGRFAM: Phosphoribosylformylglycinamidine synthase~KEGG: dia:Dtpsy_1582 phosphoribosylformylglycinamidine synthase~PFAM: AIR synthase-related protein, C-terminal; AIR synthase-related protein inference protein motif:TFAM:TIGR01735 db_xref GO:0004642 db_xref InterPro:IPR000728 db_xref InterPro:IPR010073 db_xref InterPro:IPR010918 3060230 3061048 gene locus_tag Alide2_2929 3060230 3061048 CDS product methionine aminopeptidase, type I EC_number 3.4.11.18 transl_table 11 protein_id gb|AEB85277.1||gnl|jgi|Alide2_2929 note TIGRFAM: Peptidase M24A, methionine aminopeptidase, subfamily 1~KEGG: dia:Dtpsy_1581 methionine aminopeptidase, type I~PFAM: Peptidase M24, structural domain inference protein motif:TFAM:TIGR00500 db_xref GO:0004177 db_xref GO:0008235 db_xref InterPro:IPR000994 db_xref InterPro:IPR002467 3061096 3063720 gene locus_tag Alide2_2930 3061096 3063720 CDS product UTP-GlnB uridylyltransferase, GlnD EC_number 2.7.7.59 transl_table 11 protein_id gb|AEB85278.1||gnl|jgi|Alide2_2930 note KEGG: dia:Dtpsy_1580 PII uridylyl-transferase~PFAM: PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase; Domain of unknown function DUF294, nucleotidyltransferase putative; Metal-dependent phosphohydrolase, HD subdomain; Amino acid-binding ACT~TIGRFAM: Protein-PII uridylyltransferase~HAMAP: Protein-PII uridylyltransferase~SMART: Metal-dependent phosphohydrolase, HD domain inference protein motif:HAMAP:MF_00277 db_xref InterPro:IPR002912 db_xref InterPro:IPR003607 db_xref InterPro:IPR005105 db_xref InterPro:IPR006674 db_xref InterPro:IPR010043 db_xref InterPro:IPR013546 3065208 3063730 gene locus_tag Alide2_2931 3065208 3063730 CDS product xanthine permease transl_table 11 protein_id gb|AEB85279.1||gnl|jgi|Alide2_2931 note KEGG: ctt:CtCNB1_3177 uracil-xanthine permease~TIGRFAM: Xanthine permease; Xanthine/uracil permease~PFAM: Xanthine/uracil/vitamin C permease inference protein motif:TFAM:TIGR03173 db_xref GO:0005215 db_xref InterPro:IPR006042 db_xref InterPro:IPR006043 db_xref InterPro:IPR017588 3065979 3065440 gene locus_tag Alide2_2932 3065979 3065440 CDS product peptide deformylase EC_number 3.5.1.88 transl_table 11 protein_id gb|AEB85280.1||gnl|jgi|Alide2_2932 note TIGRFAM: Formylmethionine deformylase~KEGG: dac:Daci_4855 peptide deformylase~PFAM: Formylmethionine deformylase inference protein motif:TFAM:TIGR00079 db_xref GO:0005506 db_xref GO:0042586 db_xref InterPro:IPR000181 3066073 3066492 gene locus_tag Alide2_2933 3066073 3066492 CDS product protein of unknown function DUF454 transl_table 11 protein_id gb|AEB85281.1||gnl|jgi|Alide2_2933 note PFAM: Protein of unknown function DUF454~KEGG: ajs:Ajs_2296 hypothetical protein inference protein motif:PFAM:PF04304 db_xref InterPro:IPR007401 3066554 3066629 gene locus_tag Alide2_R0037 note tRNA-Asn1 3066554 3066629 tRNA product tRNA-Asn 3066682 3066757 gene locus_tag Alide2_R0038 note tRNA-Asn2 3066682 3066757 tRNA product tRNA-Asn 3067210 3066806 gene locus_tag Alide2_2934 pseudo 3067326 3067652 gene locus_tag Alide2_2935 3067326 3067652 CDS product Protein of unknown function DUF3423 transl_table 11 protein_id gb|AEB85282.1||gnl|jgi|Alide2_2935 note PFAM: Protein of unknown function DUF3423 inference protein motif:PFAM:PF11903 db_xref InterPro:IPR021831 3067654 3068256 gene locus_tag Alide2_2936 3067654 3068256 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85283.1||gnl|jgi|Alide2_2936 note KEGG: pzu:PHZ_c2128 hypothetical protein inference similar to AA sequence:KEGG:PHZ_c2128 3069800 3068541 gene locus_tag Alide2_2937 3069800 3068541 CDS product isocitrate dehydrogenase, NADP-dependent EC_number 1.1.1.42 transl_table 11 protein_id gb|AEB85284.1||gnl|jgi|Alide2_2937 note TIGRFAM: Isocitrate dehydrogenase NADP-dependent, prokaryotic~KEGG: aav:Aave_2572 isocitrate dehydrogenase~PFAM: Isocitrate/isopropylmalate dehydrogenase inference protein motif:TFAM:TIGR00183 db_xref GO:0004450 db_xref InterPro:IPR001804 db_xref InterPro:IPR004439 3070323 3070796 gene locus_tag Alide2_2938 3070323 3070796 CDS product protein of unknown function DUF192 transl_table 11 protein_id gb|AEB85285.1||gnl|jgi|Alide2_2938 note PFAM: Protein of unknown function DUF192~KEGG: dia:Dtpsy_1560 protein of unknown function DUF192 inference protein motif:PFAM:PF02643 db_xref InterPro:IPR003795 3073103 3070866 gene locus_tag Alide2_2939 3073103 3070866 CDS product isocitrate dehydrogenase, NADP-dependent EC_number 1.1.1.42 transl_table 11 protein_id gb|AEB85286.1||gnl|jgi|Alide2_2939 note TIGRFAM: Isocitrate dehydrogenase NADP-dependent, monomeric type~KEGG: ajs:Ajs_2300 isocitrate dehydrogenase, NADP-dependent~PFAM: Isocitrate dehydrogenase NADP-dependent, monomeric type inference protein motif:TFAM:TIGR00178 db_xref GO:0004450 db_xref InterPro:IPR004436 3073984 3073403 gene locus_tag Alide2_2940 3073984 3073403 CDS product Superoxide dismutase EC_number 1.15.1.1 transl_table 11 protein_id gb|AEB85287.1||gnl|jgi|Alide2_2940 note KEGG: ajs:Ajs_2301 superoxide dismutase~PFAM: Manganese/iron superoxide dismutase, C-terminal; Manganese/iron superoxide dismutase, N-terminal inference protein motif:PRIAM:1.15.1.1 db_xref InterPro:IPR019831 db_xref InterPro:IPR019832 3075464 3074127 gene locus_tag Alide2_2941 3075464 3074127 CDS product Exodeoxyribonuclease 7 large subunit EC_number 3.1.11.6 transl_table 11 protein_id gb|AEB85288.1||gnl|jgi|Alide2_2941 note PFAM: Exonuclease VII, large subunit, C-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type~TIGRFAM: Exonuclease VII, large subunit~HAMAP: Exonuclease VII, large subunit~KEGG: ajs:Ajs_2302 exodeoxyribonuclease VII large subunit inference protein motif:HAMAP:MF_00378 db_xref InterPro:IPR003753 db_xref InterPro:IPR004365 db_xref InterPro:IPR020579 3075827 3076465 gene locus_tag Alide2_2942 3075827 3076465 CDS product MotA/TolQ/ExbB proton channel transl_table 11 protein_id gb|AEB85289.1||gnl|jgi|Alide2_2942 note PFAM: MotA/TolQ/ExbB proton channel~KEGG: dia:Dtpsy_1556 MotA/TolQ/ExbB proton channel inference protein motif:PFAM:PF01618 db_xref GO:0008565 db_xref InterPro:IPR002898 3076473 3076898 gene locus_tag Alide2_2943 3076473 3076898 CDS product Biopolymer transport protein ExbD/TolR transl_table 11 protein_id gb|AEB85290.1||gnl|jgi|Alide2_2943 note PFAM: Biopolymer transport protein ExbD/TolR~KEGG: dia:Dtpsy_1555 biopolymer transport protein ExbD/TolR inference protein motif:PFAM:PF02472 db_xref GO:0005215 db_xref InterPro:IPR003400 3076903 3077901 gene locus_tag Alide2_2944 3076903 3077901 CDS product tetraacyldisaccharide 4'-kinase EC_number 2.7.1.130 transl_table 11 protein_id gb|AEB85291.1||gnl|jgi|Alide2_2944 note TIGRFAM: Tetraacyldisaccharide 4'-kinase~KEGG: ajs:Ajs_2305 tetraacyldisaccharide 4'-kinase~PFAM: Tetraacyldisaccharide 4'-kinase inference protein motif:TFAM:TIGR00682 db_xref GO:0005524 db_xref GO:0009029 db_xref InterPro:IPR003758 3077915 3078097 gene locus_tag Alide2_2945 3077915 3078097 CDS product protein of unknown function DUF343 transl_table 11 protein_id gb|AEB85292.1||gnl|jgi|Alide2_2945 note PFAM: Uncharacterised protein family UPF0434/Trm112~KEGG: dia:Dtpsy_1553 protein of unknown function DUF343 inference protein motif:PFAM:PF03966 db_xref InterPro:IPR005651 3078094 3078879 gene locus_tag Alide2_2946 3078094 3078879 CDS product 3-deoxy-manno-octulosonate cytidylyltransferase EC_number 2.7.7.38 transl_table 11 protein_id gb|AEB85293.1||gnl|jgi|Alide2_2946 note PFAM: Acylneuraminate cytidylyltransferase~TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase~HAMAP: 3-deoxy-D-manno-octulosonate cytidylyltransferase~KEGG: ajs:Ajs_2307 3-deoxy-D-manno-octulosonate cytidylyltransferase inference protein motif:HAMAP:MF_00057 db_xref InterPro:IPR003329 db_xref InterPro:IPR004528 3078978 3079634 gene locus_tag Alide2_2947 3078978 3079634 CDS product adenylate kinase transl_table 11 protein_id gb|AEB85294.1||gnl|jgi|Alide2_2947 note KEGG: dia:Dtpsy_1551 adenylate kinase~TIGRFAM: Adenylate kinase, subfamily~PFAM: Adenylate kinase; Adenylate kinase, active site lid domain inference protein motif:TFAM:TIGR01351 db_xref GO:0005524 db_xref GO:0019201 db_xref InterPro:IPR000850 db_xref InterPro:IPR006259 db_xref InterPro:IPR007862 3080669 3079707 gene locus_tag Alide2_2948 3080669 3079707 CDS product Asparaginase EC_number 3.5.1.1 transl_table 11 protein_id gb|AEB85295.1||gnl|jgi|Alide2_2948 note PFAM: Asparaginase/glutaminase~KEGG: dia:Dtpsy_1550 asparaginase~SMART: Asparaginase/glutaminase inference protein motif:PRIAM:3.5.1.1 db_xref InterPro:IPR006034 3080749 3081423 gene locus_tag Alide2_2949 3080749 3081423 CDS product SOS-response transcriptional repressor, LexA transl_table 11 protein_id gb|AEB85296.1||gnl|jgi|Alide2_2949 note KEGG: dia:Dtpsy_1549 LexA repressor~TIGRFAM: Peptidase S24, LexA repressor~PFAM: LexA, DNA-binding domain; Peptidase S24/S26A/S26B, conserved region inference protein motif:TFAM:TIGR00498 db_xref GO:0004252 db_xref InterPro:IPR006199 db_xref InterPro:IPR006200 db_xref InterPro:IPR019759 3081578 3081922 gene locus_tag Alide2_2950 3081578 3081922 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85297.1||gnl|jgi|Alide2_2950 note KEGG: ajs:Ajs_2311 hypothetical protein inference similar to AA sequence:KEGG:Ajs_2311 3085910 3081930 gene locus_tag Alide2_2951 3085910 3081930 CDS product ATP-dependent helicase HrpA transl_table 11 protein_id gb|AEB85298.1||gnl|jgi|Alide2_2951 note TIGRFAM: RNA helicase, ATP-dependent DEAH box, HrpA type~PFAM: Helicase-associated domain; Helicase, C-terminal; Domain of unknown function DUF1605~KEGG: dia:Dtpsy_1546 ATP-dependent helicase HrpA~SMART: Helicase-associated domain; DEAD-like helicase, N-terminal; ATPase, AAA+ type, core; Helicase, C-terminal inference protein motif:TFAM:TIGR01967 db_xref GO:0005524 db_xref GO:0008026 db_xref InterPro:IPR001650 db_xref InterPro:IPR003593 db_xref InterPro:IPR007502 db_xref InterPro:IPR010222 db_xref InterPro:IPR011709 db_xref InterPro:IPR014001 3087159 3085966 gene locus_tag Alide2_2952 3087159 3085966 CDS product acetyl-CoA acetyltransferase EC_number 2.3.1.9 transl_table 11 protein_id gb|AEB85299.1||gnl|jgi|Alide2_2952 note TIGRFAM: Thiolase~KEGG: ajs:Ajs_2317 acetyl-CoA acetyltransferases~PFAM: Thiolase, N-terminal; Thiolase, C-terminal inference protein motif:TFAM:TIGR01930 db_xref GO:0008026 db_xref InterPro:IPR002155 db_xref InterPro:IPR020616 db_xref InterPro:IPR020617 3088631 3087156 gene locus_tag Alide2_2953 3088631 3087156 CDS product o-succinylbenzoate--CoA ligase EC_number 6.2.1.26 transl_table 11 protein_id gb|AEB85300.1||gnl|jgi|Alide2_2953 note KEGG: dia:Dtpsy_1541 AMP-dependent synthetase and ligase~PFAM: AMP-dependent synthetase/ligase inference protein motif:PRIAM:6.2.1.26 db_xref InterPro:IPR000873 3089212 3088628 gene locus_tag Alide2_2954 3089212 3088628 CDS product BioY protein transl_table 11 protein_id gb|AEB85301.1||gnl|jgi|Alide2_2954 note PFAM: BioY protein~KEGG: dia:Dtpsy_1540 BioY protein inference protein motif:PFAM:PF02632 db_xref InterPro:IPR003784 3089843 3089250 gene locus_tag Alide2_2955 3089843 3089250 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB85302.1||gnl|jgi|Alide2_2955 note PFAM: Cobalt transport protein~KEGG: ajs:Ajs_2320 cobalt transport protein inference protein motif:PFAM:PF02361 db_xref GO:0015087 db_xref InterPro:IPR003339 3090635 3089862 gene locus_tag Alide2_2956 3090635 3089862 CDS product ABC transporter related protein transl_table 11 protein_id gb|AEB85303.1||gnl|jgi|Alide2_2956 note KEGG: dia:Dtpsy_1538 ABC transporter related~PFAM: ABC transporter-like~SMART: ATPase, AAA+ type, core inference protein motif:PFAM:PF00005 db_xref GO:0005524 db_xref GO:0016887 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 3091066 3091644 gene locus_tag Alide2_2957 3091066 3091644 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85304.1||gnl|jgi|Alide2_2957 note KEGG: bte:BTH_II1296 hypothetical protein inference similar to AA sequence:KEGG:BTH_II1296 3091691 3092125 gene locus_tag Alide2_2958 3091691 3092125 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85305.1||gnl|jgi|Alide2_2958 note KEGG: gdj:Gdia_1658 hypothetical protein inference similar to AA sequence:KEGG:Gdia_1658 3092179 3092628 gene locus_tag Alide2_2959 3092179 3092628 CDS product lactoylglutathione lyase EC_number 4.4.1.5 transl_table 11 protein_id gb|AEB85306.1||gnl|jgi|Alide2_2959 note TIGRFAM: Glyoxalase I~KEGG: dia:Dtpsy_1870 lactoylglutathione lyase~PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase inference protein motif:TFAM:TIGR00068 db_xref GO:0004462 db_xref GO:0046872 db_xref InterPro:IPR004360 db_xref InterPro:IPR004361 3092798 3093559 gene locus_tag Alide2_2960 3092798 3093559 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85307.1||gnl|jgi|Alide2_2960 note KEGG: vap:Vapar_2120 hypothetical protein inference similar to AA sequence:KEGG:Vapar_2120 3093556 3093756 gene locus_tag Alide2_2961 3093556 3093756 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85308.1||gnl|jgi|Alide2_2961 inference ab initio prediction:Prodigal:1.4 3094493 3093990 gene locus_tag Alide2_2962 3094493 3093990 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85309.1||gnl|jgi|Alide2_2962 note manually curated~KEGG: bcm:Bcenmc03_6935 hypothetical protein inference similar to AA sequence:KEGG:Bcenmc03_6935 3095735 3094932 gene locus_tag Alide2_2963 3095735 3094932 CDS product IstB domain protein ATP-binding protein transl_table 11 protein_id gb|AEB85310.1||gnl|jgi|Alide2_2963 note KEGG: axy:AXYL_06594 IstB-like ATP binding family protein 3~PFAM: IstB-like ATP-binding protein~SMART: ATPase, AAA+ type, core inference protein motif:PFAM:PF01695 db_xref GO:0005524 db_xref InterPro:IPR002611 db_xref InterPro:IPR003593 3097251 3095725 gene locus_tag Alide2_2964 3097251 3095725 CDS product Integrase catalytic region transl_table 11 protein_id gb|AEB85311.1||gnl|jgi|Alide2_2964 note PFAM: Integrase, catalytic core~KEGG: axy:AXYL_06593 integrase family protein 10 inference protein motif:PFAM:PF00665 db_xref GO:0003677 db_xref InterPro:IPR001584 3097781 3098095 gene locus_tag Alide2_2965 3097781 3098095 CDS product protein of unknown function DUF736 transl_table 11 protein_id gb|AEB85312.1||gnl|jgi|Alide2_2965 note PFAM: Protein of unknown function DUF736~KEGG: dac:Daci_0462 hypothetical protein inference protein motif:PFAM:PF05284 db_xref InterPro:IPR007948 3098740 3098450 gene locus_tag Alide2_2966 3098740 3098450 CDS product helix-turn-helix domain protein transl_table 11 protein_id gb|AEB85313.1||gnl|jgi|Alide2_2966 note KEGG: dac:Daci_0461 XRE family transcriptional regulator~PFAM: Helix-turn-helix type 3~SMART: Helix-turn-helix type 3 inference protein motif:PFAM:PF01381 db_xref GO:0043565 db_xref InterPro:IPR001387 3098952 3099299 gene locus_tag Alide2_2967 3098952 3099299 CDS product putative lipoprotein transl_table 11 protein_id gb|AEB85314.1||gnl|jgi|Alide2_2967 note KEGG: tgr:Tgr7_1875 putative lipoprotein inference similar to AA sequence:KEGG:Tgr7_1875 3099593 3100342 gene locus_tag Alide2_2968 3099593 3100342 CDS product Protein of unknown function DUF2285 transl_table 11 protein_id gb|AEB85315.1||gnl|jgi|Alide2_2968 note PFAM: Protein of unknown function DUF2285~KEGG: bpr:GBP346_A0953 hypothetical protein inference protein motif:PFAM:PF10074 db_xref InterPro:IPR018754 3100426 3100707 gene locus_tag Alide2_2969 3100426 3100707 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85316.1||gnl|jgi|Alide2_2969 note KEGG: rpi:Rpic_2619 hypothetical protein inference similar to AA sequence:KEGG:Rpic_2619 3100734 3101591 gene locus_tag Alide2_2970 3100734 3101591 CDS product Replication initiator protein A transl_table 11 protein_id gb|AEB85317.1||gnl|jgi|Alide2_2970 note PFAM: Replication initiator protein A~KEGG: ajs:Ajs_2653 putative replication initiator and transcription repressor protein inference protein motif:PFAM:PF10134 db_xref InterPro:IPR018777 3101881 3102519 gene locus_tag Alide2_2971 3101881 3102519 CDS product Cobyrinic acid ac-diamide synthase transl_table 11 protein_id gb|AEB85318.1||gnl|jgi|Alide2_2971 note PFAM: Cobyrinic acid a,c-diamide synthase~KEGG: dac:Daci_2720 cobyrinic acid ac-diamide synthase inference protein motif:PFAM:PF01656 db_xref InterPro:IPR002586 3102516 3102800 gene locus_tag Alide2_2972 3102516 3102800 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85319.1||gnl|jgi|Alide2_2972 note KEGG: bpt:Bpet2187 hypothetical protein inference similar to AA sequence:KEGG:Bpet2187 3102797 3103342 gene locus_tag Alide2_2973 3102797 3103342 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85320.1||gnl|jgi|Alide2_2973 note KEGG: rme:Rmet_1257 hypothetical protein inference similar to AA sequence:KEGG:Rmet_1257 3103339 3103938 gene locus_tag Alide2_2974 3103339 3103938 CDS product Peptidase S26, conserved region transl_table 11 protein_id gb|AEB85321.1||gnl|jgi|Alide2_2974 note PFAM: Peptidase S26, conserved region~KEGG: dia:Dtpsy_1292 TraF peptidase. Serine peptidase. MEROPS family S26C inference protein motif:PFAM:PF10502 db_xref InterPro:IPR019533 3104399 3106381 gene locus_tag Alide2_2975 3104399 3106381 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85322.1||gnl|jgi|Alide2_2975 note KEGG: dac:Daci_0453 hypothetical protein inference similar to AA sequence:KEGG:Daci_0453 3107400 3106387 gene locus_tag Alide2_2976 3107400 3106387 CDS product Ferrochelatase EC_number 4.99.1.1 transl_table 11 protein_id gb|AEB85323.1||gnl|jgi|Alide2_2976 note PFAM: Ferrochelatase~TIGRFAM: Ferrochelatase~HAMAP: Ferrochelatase~KEGG: ajs:Ajs_1652 ferrochelatase inference protein motif:HAMAP:MF_00323 db_xref InterPro:IPR001015 3108035 3107475 gene locus_tag Alide2_2977 3108035 3107475 CDS product bifunctional deaminase-reductase domain protein transl_table 11 protein_id gb|AEB85324.1||gnl|jgi|Alide2_2977 note PFAM: Bacterial bifunctional deaminase-reductase, C-terminal~KEGG: mxa:MXAN_6138 riboflavin biosynthesis protein RibD domain-containing protein inference protein motif:PFAM:PF01872 db_xref GO:0008703 db_xref InterPro:IPR002734 3110652 3108094 gene locus_tag Alide2_2978 3110652 3108094 CDS product Protein of unknown function DUF2309 transl_table 11 protein_id gb|AEB85325.1||gnl|jgi|Alide2_2978 note PFAM: Uncharacterised protein family UPF0753~KEGG: mei:Msip34_2093 hypothetical protein inference protein motif:PFAM:PF10070 db_xref InterPro:IPR018752 3112244 3110679 gene locus_tag Alide2_2979 3112244 3110679 CDS product NADH/Ubiquinone/plastoquinone (complex I) transl_table 11 protein_id gb|AEB85326.1||gnl|jgi|Alide2_2979 note PFAM: NADH:ubiquinone/plastoquinone oxidoreductase~KEGG: mei:Msip34_2092 NADH dehydrogenase subunit L inference protein motif:PFAM:PF00361 db_xref GO:0008137 db_xref InterPro:IPR001750 3112344 3113261 gene locus_tag Alide2_2980 3112344 3113261 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB85327.1||gnl|jgi|Alide2_2980 note PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding~KEGG: mep:MPQ_2042 transcriptional regulator, LysR family inference protein motif:PFAM:PF00126 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 3114386 3113406 gene locus_tag Alide2_2981 3114386 3113406 CDS product integral membrane protein, TerC family transl_table 11 protein_id gb|AEB85328.1||gnl|jgi|Alide2_2981 note KEGG: lch:Lcho_3347 integral membrane protein TerC~TIGRFAM: Integral membrane protein TerC, riboswitch-linked~PFAM: Integral membrane protein TerC inference protein motif:TFAM:TIGR03718 db_xref InterPro:IPR005496 db_xref InterPro:IPR022369 3114849 3114442 gene locus_tag Alide2_2982 3114849 3114442 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85329.1||gnl|jgi|Alide2_2982 note KEGG: lch:Lcho_3349 hypothetical protein inference similar to AA sequence:KEGG:Lcho_3349 3115145 3114915 gene locus_tag Alide2_2983 3115145 3114915 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85330.1||gnl|jgi|Alide2_2983 note KEGG: rme:Rmet_5308 hypothetical protein inference similar to AA sequence:KEGG:Rmet_5308 3115266 3116192 gene locus_tag Alide2_2984 3115266 3116192 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB85331.1||gnl|jgi|Alide2_2984 note PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding~KEGG: tin:Tint_2185 transcriptional regulator, LysR family inference protein motif:PFAM:PF00126 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 3116229 3116909 gene locus_tag Alide2_2985 3116229 3116909 CDS product glutathione peroxidase transl_table 11 protein_id gb|AEB85332.1||gnl|jgi|Alide2_2985 note KEGG: reu:Reut_A0042 glutathione peroxidase~manually curated~PFAM: Glutathione peroxidase inference protein motif:PFAM:PF00255 db_xref GO:0004602 db_xref InterPro:IPR000889 3117880 3116978 gene locus_tag Alide2_2986 3117880 3116978 CDS product NAD-dependent epimerase/dehydratase transl_table 11 protein_id gb|AEB85333.1||gnl|jgi|Alide2_2986 note PFAM: NAD-dependent epimerase/dehydratase; Domain of unknown function DUF1731, C-terminal~KEGG: bav:BAV2083 hypothetical protein inference protein motif:PFAM:PF01370 db_xref GO:0003824 db_xref GO:0050662 db_xref InterPro:IPR001509 db_xref InterPro:IPR010099 db_xref InterPro:IPR013549 3118608 3117910 gene locus_tag Alide2_2987 3118608 3117910 CDS product short-chain dehydrogenase/reductase SDR transl_table 11 protein_id gb|AEB85334.1||gnl|jgi|Alide2_2987 note PFAM: Short-chain dehydrogenase/reductase SDR~KEGG: ctt:CtCNB1_1994 hypothetical protein inference protein motif:PFAM:PF00106 db_xref GO:0016491 db_xref InterPro:IPR002198 3120171 3118633 gene locus_tag Alide2_2988 3120171 3118633 CDS product deoxyribodipyrimidine photolyase-related protein transl_table 11 protein_id gb|AEB85335.1||gnl|jgi|Alide2_2988 note PFAM: Deoxyribodipyrimidine photolyase-related protein~KEGG: ctt:CtCNB1_1993 deoxyribodipyrimidine photolyase-related protein inference protein motif:PFAM:PF04244 db_xref InterPro:IPR007357 3121326 3120400 gene locus_tag Alide2_2989 3121326 3120400 CDS product beta-Ig-H3/fasciclin transl_table 11 protein_id gb|AEB85336.1||gnl|jgi|Alide2_2989 note KEGG: reu:Reut_C6236 beta-Ig-H3/fasciclin~PFAM: FAS1 domain~SMART: FAS1 domain inference protein motif:PFAM:PF02469 db_xref InterPro:IPR000782 3122984 3121434 gene locus_tag Alide2_2990 3122984 3121434 CDS product DNA photolyase FAD-binding protein transl_table 11 protein_id gb|AEB85337.1||gnl|jgi|Alide2_2990 note PFAM: DNA photolyase, FAD-binding/Cryptochrome, C-terminal; DNA photolyase, N-terminal~KEGG: tmz:Tmz1t_3951 deoxyribodipyrimidine photo-lyase inference protein motif:PFAM:PF03441 db_xref GO:0003913 db_xref InterPro:IPR005101 db_xref InterPro:IPR006050 3123600 3122998 gene locus_tag Alide2_2991 3123600 3122998 CDS product Lipocalin family protein transl_table 11 protein_id gb|AEB85338.1||gnl|jgi|Alide2_2991 note PFAM: Lipocalin-like~KEGG: reu:Reut_C6237 outer membrane lipoprotein, lipocalin inference protein motif:PFAM:PF08212 db_xref InterPro:IPR013208 3124593 3123619 gene locus_tag Alide2_2992 3124593 3123619 CDS product cobalamin B12-binding domain protein transl_table 11 protein_id gb|AEB85339.1||gnl|jgi|Alide2_2992 note KEGG: reu:Reut_C6238 regulatory protein, MerR~PFAM: Cobalamin (vitamin B12)-binding; HTH transcriptional regulator, MerR~SMART: HTH transcriptional regulator, MerR inference protein motif:PFAM:PF02310 db_xref GO:0003700 db_xref GO:0031419 db_xref GO:0046872 db_xref InterPro:IPR000551 db_xref InterPro:IPR006158 3124712 3126016 gene locus_tag Alide2_2993 3124712 3126016 CDS product fumarate reductase/succinate dehydrogenase flavoprotein domain protein transl_table 11 protein_id gb|AEB85340.1||gnl|jgi|Alide2_2993 note PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal~KEGG: bav:BAV2082 dehydrogenase inference protein motif:PFAM:PF00890 db_xref GO:0009055 db_xref GO:0016491 db_xref InterPro:IPR003953 3126013 3126837 gene locus_tag Alide2_2994 3126013 3126837 CDS product protein of unknown function DUF1365 transl_table 11 protein_id gb|AEB85341.1||gnl|jgi|Alide2_2994 note PFAM: Protein of unknown function DUF1365~KEGG: bav:BAV2081 hypothetical protein inference protein motif:PFAM:PF07103 db_xref InterPro:IPR010775 3126840 3128060 gene locus_tag Alide2_2995 3126840 3128060 CDS product Cyclopropane-fatty-acyl-phospholipid synthase EC_number 2.1.1.79 transl_table 11 protein_id gb|AEB85342.1||gnl|jgi|Alide2_2995 note KEGG: dia:Dtpsy_2396 cyclopropane-fatty-acyl-phospholipid synthase~PFAM: Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase inference protein motif:PRIAM:2.1.1.79 db_xref InterPro:IPR003333 3128159 3128686 gene locus_tag Alide2_2996 3128159 3128686 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85343.1||gnl|jgi|Alide2_2996 note KEGG: dia:Dtpsy_2394 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_2394 3128683 3130002 gene locus_tag Alide2_2997 3128683 3130002 CDS product major facilitator superfamily MFS_1 transl_table 11 protein_id gb|AEB85344.1||gnl|jgi|Alide2_2997 note PFAM: Major facilitator superfamily MFS-1~KEGG: bav:BAV2078 transporter inference protein motif:PFAM:PF07690 db_xref InterPro:IPR011701 3129999 3130535 gene locus_tag Alide2_2998 3129999 3130535 CDS product putative lipoprotein transl_table 11 protein_id gb|AEB85345.1||gnl|jgi|Alide2_2998 note KEGG: dia:Dtpsy_2392 putative lipoprotein inference similar to AA sequence:KEGG:Dtpsy_2392 3130540 3131322 gene locus_tag Alide2_2999 3130540 3131322 CDS product short-chain dehydrogenase/reductase SDR transl_table 11 protein_id gb|AEB85346.1||gnl|jgi|Alide2_2999 note PFAM: Short-chain dehydrogenase/reductase SDR~KEGG: bav:BAV2076 short-chain dehydrogenase inference protein motif:PFAM:PF00106 db_xref GO:0016491 db_xref InterPro:IPR002198 3131325 3131840 gene locus_tag Alide2_3000 3131325 3131840 CDS product isomerase transl_table 11 protein_id gb|AEB85347.1||gnl|jgi|Alide2_3000 note KEGG: bav:BAV2075 isomerase inference similar to AA sequence:KEGG:BAV2075 3131818 3132507 gene locus_tag Alide2_3001 3131818 3132507 CDS product Glutathione S-transferase domain protein transl_table 11 protein_id gb|AEB85348.1||gnl|jgi|Alide2_3001 note PFAM: Glutathione S-transferase, N-terminal; Glutathione S-transferase, C-terminal~KEGG: ajs:Ajs_1800 glutathione S-transferase domain-containing protein inference protein motif:PFAM:PF02798 db_xref InterPro:IPR004045 db_xref InterPro:IPR004046 3132562 3134025 gene locus_tag Alide2_3002 3132562 3134025 CDS product Deoxyribodipyrimidine photo-lyase EC_number 4.1.99.3 transl_table 11 protein_id gb|AEB85349.1||gnl|jgi|Alide2_3002 note KEGG: ajs:Ajs_1801 deoxyribodipyrimidine photo-lyase type I~PFAM: DNA photolyase, FAD-binding/Cryptochrome, C-terminal; DNA photolyase, N-terminal inference protein motif:PRIAM:4.1.99.3 db_xref InterPro:IPR005101 db_xref InterPro:IPR006050 3134038 3134568 gene locus_tag Alide2_3003 3134038 3134568 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB85350.1||gnl|jgi|Alide2_3003 note PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding~KEGG: dia:Dtpsy_3510 transcriptional regulator, LysR family inference protein motif:PFAM:PF00126 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 3134628 3136154 gene locus_tag Alide2_3004 3134628 3136154 CDS product integrase catalytic subunit transl_table 11 protein_id gb|AEB85351.1||gnl|jgi|Alide2_3004 note KEGG: bvi:Bcep1808_2622 integrase catalytic subunit inference similar to AA sequence:KEGG:Bcep1808_2622 3136147 3136962 gene locus_tag Alide2_3005 3136147 3136962 CDS product IstB domain protein ATP-binding protein transl_table 11 protein_id gb|AEB85352.1||gnl|jgi|Alide2_3005 note KEGG: mpt:Mpe_A2996 putative transposase~PFAM: IstB-like ATP-binding protein~SMART: ATPase, AAA+ type, core inference protein motif:PFAM:PF01695 db_xref GO:0005524 db_xref InterPro:IPR002611 db_xref InterPro:IPR003593 3137955 3137029 gene locus_tag Alide2_3006 3137955 3137029 CDS product protein of unknown function DUF1016 transl_table 11 protein_id gb|AEB85353.1||gnl|jgi|Alide2_3006 note PFAM: Protein of unknown function DUF1016~KEGG: pau:PA14_31270 hypothetical protein inference protein motif:PFAM:PF06250 db_xref InterPro:IPR009362 3139157 3137952 gene locus_tag Alide2_3007 3139157 3137952 CDS product integrase family protein transl_table 11 protein_id gb|AEB85354.1||gnl|jgi|Alide2_3007 note PFAM: Integrase, catalytic core, phage~KEGG: ajs:Ajs_2625 phage integrase family protein inference protein motif:PFAM:PF00589 db_xref GO:0003677 db_xref InterPro:IPR002104 3139389 3140294 gene locus_tag Alide2_3008 3139389 3140294 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB85355.1||gnl|jgi|Alide2_3008 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: bpt:Bpet1402 transcriptional regulator CatR inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 3140997 3140359 gene locus_tag Alide2_3009 3140997 3140359 CDS product 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase EC_number 4.1.2.14 transl_table 11 protein_id gb|AEB85356.1||gnl|jgi|Alide2_3009 note TIGRFAM: KDPG/KHG aldolase~KEGG: ajs:Ajs_2048 2-keto-3-deoxy-phosphogluconate aldolase~PFAM: KDPG/KHG aldolase inference protein motif:TFAM:TIGR01182 db_xref GO:0003824 db_xref InterPro:IPR000887 3142805 3140988 gene locus_tag Alide2_3010 3142805 3140988 CDS product 6-phosphogluconate dehydratase EC_number 4.2.1.12 transl_table 11 protein_id gb|AEB85357.1||gnl|jgi|Alide2_3010 note TIGRFAM: 6-phosphogluconate dehydratase~KEGG: ajs:Ajs_2049 phosphogluconate dehydratase~PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase inference protein motif:TFAM:TIGR01196 db_xref GO:0004456 db_xref InterPro:IPR000581 db_xref InterPro:IPR004786 3143942 3142932 gene locus_tag Alide2_3011 3143942 3142932 CDS product TRAP dicarboxylate transporter, DctP subunit transl_table 11 protein_id gb|AEB85358.1||gnl|jgi|Alide2_3011 note KEGG: dia:Dtpsy_1873 TRAP dicarboxylate transporter, DctP subunit~TIGRFAM: TRAP dicarboxylate transporter, DctP subunit~PFAM: Extracellular solute-binding protein, family 7, bacteria inference protein motif:TFAM:TIGR00787 db_xref InterPro:IPR004682 db_xref InterPro:IPR018389 3145279 3143999 gene locus_tag Alide2_3012 3145279 3143999 CDS product TRAP dicarboxylate transporter, DctM subunit transl_table 11 protein_id gb|AEB85359.1||gnl|jgi|Alide2_3012 note KEGG: dia:Dtpsy_1874 TRAP dicarboxylate transporter, DctM subunit~TIGRFAM: TRAP dicarboxylate transporter, DctM subunit~PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit inference protein motif:TFAM:TIGR00786 db_xref InterPro:IPR004681 db_xref InterPro:IPR010656 3145811 3145290 gene locus_tag Alide2_3013 3145811 3145290 CDS product Tripartite ATP-independent periplasmic transporter DctQ component transl_table 11 protein_id gb|AEB85360.1||gnl|jgi|Alide2_3013 note PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component~KEGG: dia:Dtpsy_1875 tripartite ATP-independent periplasmic transporter DctQ component inference protein motif:PFAM:PF04290 db_xref InterPro:IPR007387 3146362 3145808 gene locus_tag Alide2_3014 3146362 3145808 CDS product carbohydrate kinase, thermoresistant glucokinase family EC_number 2.7.1.12 transl_table 11 protein_id gb|AEB85361.1||gnl|jgi|Alide2_3014 note PFAM: Shikimate kinase~manually curated~KEGG: ajs:Ajs_2053 carbohydrate kinase~TIGRFAM: Carbohydrate kinase, thermoresistant glucokinase inference protein motif:TFAM:TIGR01313 db_xref GO:0016301 db_xref InterPro:IPR000623 db_xref InterPro:IPR006001 3146567 3147592 gene locus_tag Alide2_3015 3146567 3147592 CDS product transcriptional regulator, LacI family transl_table 11 protein_id gb|AEB85362.1||gnl|jgi|Alide2_3015 note KEGG: ajs:Ajs_2054 LacI family transcription regulator~PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI~SMART: HTH transcriptional regulator, LacI inference protein motif:PFAM:PF00532 db_xref GO:0003700 db_xref InterPro:IPR000843 db_xref InterPro:IPR001761 3149986 3147638 gene locus_tag Alide2_3016 3149986 3147638 CDS product ATP-dependent Clp protease, ATP-binding subunit clpA transl_table 11 protein_id gb|AEB85363.1||gnl|jgi|Alide2_3016 note TIGRFAM: ATP-dependent Clp protease ATP-binding subunit ClpA~PFAM: ATPase, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal~KEGG: dia:Dtpsy_1896 ATP-dependent Clp protease, ATP-binding subunit ClpA~SMART: ATPase, AAA+ type, core inference protein motif:TFAM:TIGR02639 db_xref GO:0004176 db_xref InterPro:IPR003593 db_xref InterPro:IPR003959 db_xref InterPro:IPR004176 db_xref InterPro:IPR013093 db_xref InterPro:IPR013461 db_xref InterPro:IPR019489 3150408 3150046 gene locus_tag Alide2_3017 3150408 3150046 CDS product ATP-dependent Clp protease adapter protein clpS transl_table 11 protein_id gb|AEB85364.1||gnl|jgi|Alide2_3017 note KEGG: dia:Dtpsy_1897 ATP-dependent Clp protease adaptor protein ClpS~HAMAP: ATP-dependent Clp protease adaptor protein ClpS~PFAM: Adaptor protein ClpS, core inference protein motif:HAMAP:MF_00302 db_xref InterPro:IPR003769 db_xref InterPro:IPR022935 3154016 3150468 gene locus_tag Alide2_3018 3154016 3150468 CDS product DNA polymerase III, alpha subunit EC_number 2.7.7.7 transl_table 11 protein_id gb|AEB85365.1||gnl|jgi|Alide2_3018 note SMART: Polymerase/histidinol phosphatase, N-terminal~TIGRFAM: DNA polymerase III, alpha subunit~KEGG: dia:Dtpsy_1898 DNA polymerase III, alpha subunit~PFAM: Bacterial DNA polymerase III, alpha subunit; PHP, C-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type inference protein motif:TFAM:TIGR00594 db_xref GO:0008408 db_xref InterPro:IPR003141 db_xref InterPro:IPR004013 db_xref InterPro:IPR004365 db_xref InterPro:IPR004805 db_xref InterPro:IPR011708 3154145 3154942 gene locus_tag Alide2_3019 3154145 3154942 CDS product outer membrane assembly lipoprotein YfiO transl_table 11 protein_id gb|AEB85366.1||gnl|jgi|Alide2_3019 note TIGRFAM: Outer membrane assembly lipoprotein YfiO~KEGG: dia:Dtpsy_1899 outer membrane assembly lipoprotein YfiO inference protein motif:TFAM:TIGR03302 db_xref InterPro:IPR017689 3156977 3154905 gene locus_tag Alide2_3020 3156977 3154905 CDS product helicase c2 transl_table 11 protein_id gb|AEB85367.1||gnl|jgi|Alide2_3020 note SMART: Helicase, ATP-dependent, c2 type~KEGG: ajs:Ajs_1828 helicase C2 inference protein motif:SMART:SM00491 db_xref GO:0003676 db_xref GO:0005524 db_xref GO:0008026 db_xref InterPro:IPR006555 3157095 3157898 gene locus_tag Alide2_3021 3157095 3157898 CDS product protein serine/threonine phosphatase transl_table 11 protein_id gb|AEB85368.1||gnl|jgi|Alide2_3021 note KEGG: dia:Dtpsy_1901 protein serine/threonine phosphatase~PFAM: Sporulation stage II, protein E C-terminal~SMART: Protein phosphatase 2C-like inference protein motif:PFAM:PF07228 db_xref GO:0004721 db_xref InterPro:IPR001932 db_xref InterPro:IPR010822 3158597 3157902 gene locus_tag Alide2_3022 3158597 3157902 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85369.1||gnl|jgi|Alide2_3022 note KEGG: ajs:Ajs_1826 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1826 3159691 3158594 gene locus_tag Alide2_3023 3159691 3158594 CDS product AFG1-family ATPase transl_table 11 protein_id gb|AEB85370.1||gnl|jgi|Alide2_3023 note PFAM: ATPase, AFG1-like~KEGG: dia:Dtpsy_1903 AFG1-family ATPase inference protein motif:PFAM:PF03969 db_xref GO:0005524 db_xref InterPro:IPR005654 3161195 3159768 gene locus_tag Alide2_3024 3161195 3159768 CDS product dihydrolipoamide dehydrogenase EC_number 1.8.1.4 transl_table 11 protein_id gb|AEB85371.1||gnl|jgi|Alide2_3024 note TIGRFAM: Dihydrolipoamide dehydrogenase~KEGG: ajs:Ajs_1824 dihydrolipoamide dehydrogenase~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; Pyridine nucleotide-disulphide oxidoreductase, dimerisation inference protein motif:TFAM:TIGR01350 db_xref GO:0004148 db_xref GO:0050660 db_xref InterPro:IPR001327 db_xref InterPro:IPR004099 db_xref InterPro:IPR006258 db_xref InterPro:IPR013027 3162537 3161281 gene locus_tag Alide2_3025 3162537 3161281 CDS product 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase EC_number 2.3.1.61 transl_table 11 protein_id gb|AEB85372.1||gnl|jgi|Alide2_3025 note TIGRFAM: Dihydrolipoamide succinyltransferase~KEGG: dia:Dtpsy_1905 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase~PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding inference protein motif:TFAM:TIGR01347 db_xref GO:0004149 db_xref InterPro:IPR000089 db_xref InterPro:IPR001078 db_xref InterPro:IPR004167 db_xref InterPro:IPR006255 3165466 3162590 gene locus_tag Alide2_3026 3165466 3162590 CDS product 2-oxoglutarate dehydrogenase, E1 subunit EC_number 1.2.4.2 transl_table 11 protein_id gb|AEB85373.1||gnl|jgi|Alide2_3026 note SMART: Transketolase-like, pyrimidine-binding domain~TIGRFAM: 2-oxoglutarate dehydrogenase, E1 component~KEGG: ajs:Ajs_1822 2-oxoglutarate dehydrogenase E1 component~PFAM: Transketolase-like, pyrimidine-binding domain; Dehydrogenase, E1 component inference protein motif:TFAM:TIGR00239 db_xref GO:0004591 db_xref GO:0030976 db_xref InterPro:IPR001017 db_xref InterPro:IPR005475 db_xref InterPro:IPR011603 3165672 3166730 gene locus_tag Alide2_3027 3165672 3166730 CDS product protein of unknown function UPF0118 transl_table 11 protein_id gb|AEB85374.1||gnl|jgi|Alide2_3027 note PFAM: Uncharacterised protein family UPF0118~KEGG: dia:Dtpsy_1907 protein of unknown function UPF0118 inference protein motif:PFAM:PF01594 db_xref InterPro:IPR002549 3167781 3166798 gene locus_tag Alide2_3028 3167781 3166798 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85375.1||gnl|jgi|Alide2_3028 note KEGG: dia:Dtpsy_1908 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_1908 db_xref InterPro:IPR005064 3168194 3167832 gene locus_tag Alide2_3029 3168194 3167832 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85376.1||gnl|jgi|Alide2_3029 note KEGG: dia:Dtpsy_1909 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_1909 3169561 3168209 gene locus_tag Alide2_3030 3169561 3168209 CDS product protein of unknown function DUF1446 transl_table 11 protein_id gb|AEB85377.1||gnl|jgi|Alide2_3030 note PFAM: Protein of unknown function DUF1446~KEGG: dia:Dtpsy_1910 protein of unknown function DUF1446 inference protein motif:PFAM:PF07287 db_xref InterPro:IPR010839 3169654 3170559 gene locus_tag Alide2_3031 3169654 3170559 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB85378.1||gnl|jgi|Alide2_3031 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: ajs:Ajs_1817 LysR family transcriptional regulator inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 3170697 3171563 gene locus_tag Alide2_3032 3170697 3171563 CDS product UspA domain-containing protein transl_table 11 protein_id gb|AEB85379.1||gnl|jgi|Alide2_3032 note PFAM: UspA~KEGG: ajs:Ajs_1816 UspA domain-containing protein inference protein motif:PFAM:PF00582 db_xref InterPro:IPR006016 3173220 3171583 gene locus_tag Alide2_3033 3173220 3171583 CDS product Nickel-transporting ATPase, Polyamine-transporting ATPase EC_number 3.6.3.31 EC_number 3.6.3.24 transl_table 11 protein_id gb|AEB85380.1||gnl|jgi|Alide2_3033 note PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal~KEGG: dia:Dtpsy_1915 ABC transporter related~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.24, 3.6.3.31 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 db_xref InterPro:IPR013563 3174262 3173222 gene locus_tag Alide2_3034 3174262 3173222 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB85381.1||gnl|jgi|Alide2_3034 note PFAM: Binding-protein-dependent transport systems inner membrane component; Mitochondrial distribution and morphology protein family 31/32, fungi~KEGG: dia:Dtpsy_1916 binding-protein-dependent transport systems inner membrane component inference protein motif:PFAM:PF00528 db_xref GO:0005215 db_xref InterPro:IPR000515 db_xref InterPro:IPR012571 3175283 3174246 gene locus_tag Alide2_3035 3175283 3174246 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB85382.1||gnl|jgi|Alide2_3035 note PFAM: Binding-protein-dependent transport systems inner membrane component~KEGG: ajs:Ajs_1811 binding-protein-dependent transport systems inner membrane component inference protein motif:PFAM:PF00528 db_xref GO:0005215 db_xref InterPro:IPR000515 3175762 3175301 gene locus_tag Alide2_3036 3175762 3175301 CDS product Isoprenylcysteine carboxyl methyltransferase transl_table 11 protein_id gb|AEB85383.1||gnl|jgi|Alide2_3036 note PFAM: Isoprenylcysteine carboxyl methyltransferase~KEGG: dia:Dtpsy_2487 putative protein-S-isoprenylcysteine methyltransferase-like protein inference protein motif:PFAM:PF04140 db_xref GO:0004671 db_xref InterPro:IPR007269 3177631 3175808 gene locus_tag Alide2_3037 3177631 3175808 CDS product ABC-type transporter, periplasmic subunit transl_table 11 protein_id gb|AEB85384.1||gnl|jgi|Alide2_3037 note PFAM: Bacterial extracellular solute-binding protein, family 5~KEGG: dia:Dtpsy_1918 extracellular solute-binding protein family 5 inference protein motif:PFAM:PF00496 db_xref GO:0005215 db_xref InterPro:IPR000914 3177677 3178477 gene locus_tag Alide2_3038 3177677 3178477 CDS product Enoyl-(acyl-carrier-protein) reductase (NADH) EC_number 1.3.1.9 transl_table 11 protein_id gb|AEB85385.1||gnl|jgi|Alide2_3038 note KEGG: dia:Dtpsy_1919 short-chain dehydrogenase/reductase SDR~PFAM: Short-chain dehydrogenase/reductase SDR inference protein motif:PRIAM:1.3.1.9 db_xref InterPro:IPR002198 3178573 3179481 gene locus_tag Alide2_3039 3178573 3179481 CDS product protein of unknown function DUF6 transmembrane transl_table 11 protein_id gb|AEB85386.1||gnl|jgi|Alide2_3039 note PFAM: Drug/metabolite transporter~KEGG: rsc:RCFBP_10755 multidrug resistance efflux transporter inference protein motif:PFAM:PF00892 db_xref InterPro:IPR000620 3179765 3179541 gene locus_tag Alide2_3040 3179765 3179541 CDS product protein of unknown function DUF465 transl_table 11 protein_id gb|AEB85387.1||gnl|jgi|Alide2_3040 note PFAM: Protein of unknown function DUF465~KEGG: cvi:CV_3311 hypothetical protein inference protein motif:PFAM:PF04325 db_xref InterPro:IPR007420 3179914 3180828 gene locus_tag Alide2_3041 3179914 3180828 CDS product DNA ligase (ATP) EC_number 6.5.1.1 transl_table 11 protein_id gb|AEB85388.1||gnl|jgi|Alide2_3041 note KEGG: dia:Dtpsy_2251 DNA ligase~PFAM: DNA ligase, ATP-dependent, central inference protein motif:PRIAM:6.5.1.1 db_xref InterPro:IPR012310 3181003 3181752 gene locus_tag Alide2_3042 3181003 3181752 CDS product integral membrane protein, YjbE family transl_table 11 protein_id gb|AEB85389.1||gnl|jgi|Alide2_3042 note KEGG: aav:Aave_4673 integral membrane protein TerC~TIGRFAM: Integral membrane protein YjbE~PFAM: Integral membrane protein TerC inference protein motif:TFAM:TIGR03717 db_xref InterPro:IPR005496 db_xref InterPro:IPR022301 3184173 3181813 gene locus_tag Alide2_3043 3184173 3181813 CDS product Lysine decarboxylase EC_number 4.1.1.18 transl_table 11 protein_id gb|AEB85390.1||gnl|jgi|Alide2_3043 note KEGG: ajs:Ajs_2762 ornithine decarboxylase~PFAM: Orn/Lys/Arg decarboxylase, major domain; Orn/Lys/Arg decarboxylase, N-terminal; Orn/Lys/Arg decarboxylase, C-terminal inference protein motif:PRIAM:4.1.1.18 db_xref InterPro:IPR000310 db_xref InterPro:IPR005308 db_xref InterPro:IPR008286 3184322 3184753 gene locus_tag Alide2_3044 3184322 3184753 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85391.1||gnl|jgi|Alide2_3044 note KEGG: dia:Dtpsy_2253 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_2253 3184823 3185740 gene locus_tag Alide2_3045 3184823 3185740 CDS product band 7 protein transl_table 11 protein_id gb|AEB85392.1||gnl|jgi|Alide2_3045 note KEGG: dia:Dtpsy_2254 band 7 protein~PFAM: Band 7 protein~SMART: Band 7 protein inference protein motif:PFAM:PF01145 db_xref InterPro:IPR001107 3186639 3185737 gene locus_tag Alide2_3046 3186639 3185737 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB85393.1||gnl|jgi|Alide2_3046 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: rfr:Rfer_0879 LysR family transcriptional regulator inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 3186832 3188556 gene locus_tag Alide2_3047 3186832 3188556 CDS product Acetolactate synthase EC_number 2.2.1.6 transl_table 11 protein_id gb|AEB85394.1||gnl|jgi|Alide2_3047 note KEGG: ajs:Ajs_2520 thiamine pyrophosphate protein~PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain; Thiamine pyrophosphate enzyme, central domain inference protein motif:PRIAM:2.2.1.6 db_xref InterPro:IPR011766 db_xref InterPro:IPR012000 db_xref InterPro:IPR012001 3188650 3188740 gene locus_tag Alide2_R0039 note tRNA-Ser4 3188650 3188740 tRNA product tRNA-Ser 3188843 3189358 gene locus_tag Alide2_3048 pseudo 3189677 3189808 gene locus_tag Alide2_3049 3189677 3189808 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85395.1||gnl|jgi|Alide2_3049 inference ab initio prediction:Prodigal:1.4 3189909 3190118 gene locus_tag Alide2_3050 3189909 3190118 CDS product protein of unknown function DUF1778 transl_table 11 protein_id gb|AEB85396.1||gnl|jgi|Alide2_3050 note PFAM: Protein of unknown function DUF1778~KEGG: ctt:CtCNB1_1524 hypothetical protein inference protein motif:PFAM:PF08681 db_xref InterPro:IPR014795 3190105 3190893 gene locus_tag Alide2_3051 3190105 3190893 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85397.1||gnl|jgi|Alide2_3051 note manually curated~KEGG: ecc:c5378 hypothetical protein inference similar to AA sequence:KEGG:c5378 3191839 3190925 gene locus_tag Alide2_3052 3191839 3190925 CDS product Integrase catalytic region transl_table 11 protein_id gb|AEB85398.1||gnl|jgi|Alide2_3052 note PFAM: Integrase, catalytic core~KEGG: rpf:Rpic12D_2820 integrase catalytic region inference protein motif:PFAM:PF00665 db_xref GO:0003677 db_xref InterPro:IPR001584 3192159 3191836 gene locus_tag Alide2_3053 3192159 3191836 CDS product transposase IS3/IS911 family protein transl_table 11 protein_id gb|AEB85399.1||gnl|jgi|Alide2_3053 note PFAM: Transposase IS3/IS911family~KEGG: ajs:Ajs_0906 transposase IS3/IS911 family protein inference protein motif:PFAM:PF01527 db_xref GO:0003677 db_xref GO:0004803 db_xref InterPro:IPR002514 3192328 3193665 gene locus_tag Alide2_3054 3192328 3193665 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85400.1||gnl|jgi|Alide2_3054 note KEGG: rme:Rmet_3347 hypothetical protein inference similar to AA sequence:KEGG:Rmet_3347 3195100 3194285 gene locus_tag Alide2_3055 3195100 3194285 CDS product transposase IS4 family protein transl_table 11 protein_id gb|AEB85401.1||gnl|jgi|Alide2_3055 note PFAM: Transposase, IS4-like~KEGG: aav:Aave_4617 transposase, IS4 family protein inference protein motif:PFAM:PF01609 db_xref GO:0003677 db_xref GO:0004803 db_xref InterPro:IPR002559 3195277 3196050 gene locus_tag Alide2_3056 3195277 3196050 CDS product DNA/RNA non-specific endonuclease transl_table 11 protein_id gb|AEB85402.1||gnl|jgi|Alide2_3056 note KEGG: pol:Bpro_5192 DNA/RNA non-specific endonuclease~PFAM: DNA/RNA non-specific endonuclease~SMART: DNA/RNA non-specific endonuclease; Extracellular Endonuclease, subunit A inference protein motif:PFAM:PF01223 db_xref GO:0003676 db_xref GO:0016787 db_xref GO:0046872 db_xref InterPro:IPR001604 db_xref InterPro:IPR020821 3197847 3196333 gene locus_tag Alide2_3057 3197847 3196333 CDS product transposase IS66 transl_table 11 protein_id gb|AEB85403.1||gnl|jgi|Alide2_3057 note PFAM: Transposase, IS66~KEGG: dia:Dtpsy_2523 transposase IS66 inference protein motif:PFAM:PF03050 db_xref InterPro:IPR004291 3198262 3197930 gene locus_tag Alide2_3058 3198262 3197930 CDS product IS66 Orf2 family protein transl_table 11 protein_id gb|AEB85404.1||gnl|jgi|Alide2_3058 note PFAM: Transposase (putative), IS66 Orf2-like~KEGG: rfr:Rfer_2710 IS66 Orf2 like inference protein motif:PFAM:PF05717 db_xref InterPro:IPR008878 3198687 3198259 gene locus_tag Alide2_3059 3198687 3198259 CDS product transposase IS3/IS911 family protein transl_table 11 protein_id gb|AEB85405.1||gnl|jgi|Alide2_3059 note PFAM: Transposase IS3/IS911family~KEGG: rfr:Rfer_2709 transposase IS3/IS911 inference protein motif:PFAM:PF01527 db_xref GO:0003677 db_xref GO:0004803 db_xref InterPro:IPR002514 3198747 3199073 gene locus_tag Alide2_3060 3198747 3199073 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85406.1||gnl|jgi|Alide2_3060 note manually curated~KEGG: alv:Alvin_3273 hypothetical protein inference similar to AA sequence:KEGG:Alvin_3273 3199176 3200150 gene locus_tag Alide2_3061 3199176 3200150 CDS product phage/plasmid-related protein TIGR03299 transl_table 11 protein_id gb|AEB85407.1||gnl|jgi|Alide2_3061 note TIGRFAM: Conserved hypothetical protein CHP03299, phage/plasmid-related~KEGG: ctt:CtCNB1_1504 hypothetical protein inference protein motif:TFAM:TIGR03299 db_xref InterPro:IPR017686 3200291 3201319 gene locus_tag Alide2_3062 3200291 3201319 CDS product phage-type endonuclease transl_table 11 protein_id gb|AEB85408.1||gnl|jgi|Alide2_3062 note KEGG: har:HEAR0514 hypothetical protein~TIGRFAM: Putative phage-type endonuclease~PFAM: YqaJ viral recombinase family inference protein motif:TFAM:TIGR03033 db_xref InterPro:IPR017482 db_xref InterPro:IPR019080 3201430 3202455 gene locus_tag Alide2_3063 3201430 3202455 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85409.1||gnl|jgi|Alide2_3063 note KEGG: pag:PLES_23531 hypothetical protein inference similar to AA sequence:KEGG:PLES_23531 3202442 3203296 gene locus_tag Alide2_3064 3202442 3203296 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85410.1||gnl|jgi|Alide2_3064 inference ab initio prediction:Prodigal:1.4 3203770 3203609 gene locus_tag Alide2_3065 3203770 3203609 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85411.1||gnl|jgi|Alide2_3065 inference ab initio prediction:Prodigal:1.4 3204320 3203781 gene locus_tag Alide2_3066 3204320 3203781 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85412.1||gnl|jgi|Alide2_3066 note KEGG: abn:AB57_0651 hypothetical protein inference similar to AA sequence:KEGG:AB57_0651 3204480 3204743 gene locus_tag Alide2_3067 3204480 3204743 CDS product helix-turn-helix domain protein transl_table 11 protein_id gb|AEB85413.1||gnl|jgi|Alide2_3067 note manually curated~PFAM: Helix-turn-helix type 3~KEGG: rsl:RPSI07_1481 putative HTH-type transcriptional regulator~SMART: Helix-turn-helix type 3 inference protein motif:PFAM:PF01381 db_xref GO:0043565 db_xref InterPro:IPR001387 3206383 3204896 gene locus_tag Alide2_3068 3206383 3204896 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85414.1||gnl|jgi|Alide2_3068 note KEGG: dap:Dacet_0600 hypothetical protein inference similar to AA sequence:KEGG:Dacet_0600 3207053 3209449 gene locus_tag Alide2_3069 3207053 3209449 CDS product DNA polymerase B region transl_table 11 protein_id gb|AEB85415.1||gnl|jgi|Alide2_3069 note KEGG: vap:Vapar_6015 DNA polymerase II~PFAM: DNA-directed DNA polymerase, family B, conserved region; DNA-directed DNA polymerase, family B, exonuclease domain~SMART: DNA-directed DNA polymerase, family B inference protein motif:PFAM:PF00136 db_xref GO:0000166 db_xref GO:0003677 db_xref GO:0003887 db_xref InterPro:IPR006133 db_xref InterPro:IPR006134 db_xref InterPro:IPR006172 3210234 3209572 gene locus_tag Alide2_3070 3210234 3209572 CDS product transposase transl_table 11 protein_id gb|AEB85416.1||gnl|jgi|Alide2_3070 note KEGG: ppg:PputGB1_4754 transposase inference similar to AA sequence:KEGG:PputGB1_4754 3210644 3210462 gene locus_tag Alide2_3071 3210644 3210462 CDS product phage transcriptional regulator, AlpA transl_table 11 protein_id gb|AEB85417.1||gnl|jgi|Alide2_3071 note PFAM: Prophage CP4-57 regulatory~KEGG: ppg:PputGB1_4755 phage transcriptional regulator, AlpA inference protein motif:PFAM:PF05930 db_xref InterPro:IPR010260 3211314 3212240 gene locus_tag Alide2_3072 3211314 3212240 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85418.1||gnl|jgi|Alide2_3072 note KEGG: ppg:PputGB1_4756 hypothetical protein inference similar to AA sequence:KEGG:PputGB1_4756 3213570 3212314 gene locus_tag Alide2_3073 3213570 3212314 CDS product integrase family protein transl_table 11 protein_id gb|AEB85419.1||gnl|jgi|Alide2_3073 note PFAM: Integrase, catalytic core, phage~KEGG: ecp:ECP_1909 Int/Topo IB signature motif; other site inference protein motif:PFAM:PF00589 db_xref GO:0003677 db_xref InterPro:IPR002104 3213930 3214907 gene locus_tag Alide2_3074 3213930 3214907 CDS product Lytic transglycosylase catalytic transl_table 11 protein_id gb|AEB85420.1||gnl|jgi|Alide2_3074 note PFAM: Lytic transglycosylase-like, catalytic; Sel1-like~KEGG: rfr:Rfer_0483 lytic transglycosylase, catalytic inference protein motif:PFAM:PF01464 db_xref InterPro:IPR006597 db_xref InterPro:IPR008258 3215565 3214953 gene locus_tag Alide2_3075 pseudo 3216307 3215653 gene locus_tag Alide2_3076 pseudo 3217394 3216318 gene locus_tag Alide2_3077 pseudo 3217774 3217566 gene locus_tag Alide2_3078 pseudo 3218659 3217826 gene locus_tag Alide2_3079 3218659 3217826 CDS product 3-oxoacyl-(acyl-carrier-protein) reductase EC_number 1.1.1.100 transl_table 11 protein_id gb|AEB85421.1||gnl|jgi|Alide2_3079 note PFAM: Short-chain dehydrogenase/reductase SDR~KEGG: ctt:CtCNB1_1711 short-chain dehydrogenase/reductase SDR~SMART: Polyketide synthase/Fatty acid synthase, KR inference protein motif:PRIAM:1.1.1.100 db_xref InterPro:IPR002198 db_xref InterPro:IPR020842 3220279 3218675 gene locus_tag Alide2_3080 3220279 3218675 CDS product Long-chain-fatty-acid--CoA ligase EC_number 6.2.1.3 transl_table 11 protein_id gb|AEB85422.1||gnl|jgi|Alide2_3080 note KEGG: tfu:Tfu_1300 DitJ-like CoA ligase~PFAM: AMP-dependent synthetase/ligase inference protein motif:PRIAM:6.2.1.3 db_xref InterPro:IPR000873 3220884 3220291 gene locus_tag Alide2_3081 3220884 3220291 CDS product Carboxymuconolactone decarboxylase transl_table 11 protein_id gb|AEB85423.1||gnl|jgi|Alide2_3081 note PFAM: Carboxymuconolactone decarboxylase~KEGG: kko:Kkor_1470 carboxymuconolactone decarboxylase inference protein motif:PFAM:PF02627 db_xref InterPro:IPR003779 3221635 3220928 gene locus_tag Alide2_3082 3221635 3220928 CDS product ABC transporter related protein transl_table 11 protein_id gb|AEB85424.1||gnl|jgi|Alide2_3082 note KEGG: axy:AXYL_02565 ABC transporter family protein 37~PFAM: ABC transporter-like~SMART: ATPase, AAA+ type, core inference protein motif:PFAM:PF00005 db_xref GO:0005524 db_xref GO:0016887 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 3222384 3221632 gene locus_tag Alide2_3083 3222384 3221632 CDS product Monosaccharide-transporting ATPase EC_number 3.6.3.17 transl_table 11 protein_id gb|AEB85425.1||gnl|jgi|Alide2_3083 note PFAM: ABC transporter-like~KEGG: axy:AXYL_02566 ABC transporter family protein 38~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.17 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 3223349 3222381 gene locus_tag Alide2_3084 3223349 3222381 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB85426.1||gnl|jgi|Alide2_3084 note PFAM: ABC transporter permease~KEGG: axy:AXYL_02567 inner-membrane translocator 29 inference protein motif:PFAM:PF02653 db_xref GO:0005215 db_xref InterPro:IPR001851 3224203 3223346 gene locus_tag Alide2_3085 3224203 3223346 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB85427.1||gnl|jgi|Alide2_3085 note PFAM: ABC transporter permease~KEGG: axy:AXYL_02568 inner-membrane translocator 30 inference protein motif:PFAM:PF02653 db_xref GO:0005215 db_xref InterPro:IPR001851 3225468 3224272 gene locus_tag Alide2_3086 3225468 3224272 CDS product Extracellular ligand-binding receptor transl_table 11 protein_id gb|AEB85428.1||gnl|jgi|Alide2_3086 note PFAM: Extracellular ligand-binding receptor~KEGG: axy:AXYL_02569 ABC branched chain amino acid family transporter, periplasmic ligand binding protein inference protein motif:PFAM:PF01094 db_xref InterPro:IPR001828 3226315 3225506 gene locus_tag Alide2_3087 3226315 3225506 CDS product 3-oxoacyl-(acyl-carrier-protein) reductase EC_number 1.1.1.100 transl_table 11 protein_id gb|AEB85429.1||gnl|jgi|Alide2_3087 note KEGG: rpb:RPB_4328 short-chain dehydrogenase/reductase SDR~PFAM: Short-chain dehydrogenase/reductase SDR inference protein motif:PRIAM:1.1.1.100 db_xref InterPro:IPR002198 3227514 3226327 gene locus_tag Alide2_3088 3227514 3226327 CDS product Propanoyl-CoA C-acyltransferase EC_number 2.3.1.176 transl_table 11 protein_id gb|AEB85430.1||gnl|jgi|Alide2_3088 note KEGG: bxe:Bxe_B2740 lipid-transfer protein~PFAM: Thiolase, N-terminal; Thiolase, C-terminal inference protein motif:PRIAM:2.3.1.176 db_xref InterPro:IPR020616 db_xref InterPro:IPR020617 3229135 3227570 gene locus_tag Alide2_3089 3229135 3227570 CDS product Long-chain-fatty-acid--CoA ligase EC_number 6.2.1.3 transl_table 11 protein_id gb|AEB85431.1||gnl|jgi|Alide2_3089 note KEGG: azl:AZL_a10790 long-chain fatty-acid-CoA ligase~PFAM: AMP-dependent synthetase/ligase inference protein motif:PRIAM:6.2.1.3 db_xref InterPro:IPR000873 3229354 3230049 gene locus_tag Alide2_3090 3229354 3230049 CDS product putative TetR family transcriptional regulator transl_table 11 protein_id gb|AEB85432.1||gnl|jgi|Alide2_3090 note KEGG: rme:Rmet_3794 putative TetR family transcriptional regulator inference similar to AA sequence:KEGG:Rmet_3794 3230371 3230240 gene locus_tag Alide2_3091 3230371 3230240 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85433.1||gnl|jgi|Alide2_3091 inference ab initio prediction:Prodigal:1.4 3231456 3230437 gene locus_tag Alide2_3092 3231456 3230437 CDS product sulfate ABC transporter, periplasmic sulfate-binding protein transl_table 11 protein_id gb|AEB85434.1||gnl|jgi|Alide2_3092 note KEGG: ajs:Ajs_1799 sulfate ABC transporter, periplasmic sulfate-binding protein~TIGRFAM: Thiosulphate-binding protein; Twin-arginine translocation pathway, signal sequence~PFAM: Bacterial extracellular solute-binding, family 1 inference protein motif:TFAM:TIGR00971 db_xref GO:0015419 db_xref InterPro:IPR005669 db_xref InterPro:IPR006059 db_xref InterPro:IPR006311 3231581 3231853 gene locus_tag Alide2_3093 3231581 3231853 CDS product Fe(II) trafficking protein YggX transl_table 11 protein_id gb|AEB85435.1||gnl|jgi|Alide2_3093 note PFAM: Fe(II) trafficking protein YggX~KEGG: ctt:CtCNB1_3078 Fe(II) trafficking protein YggX inference protein motif:PFAM:PF04362 db_xref GO:0005506 db_xref InterPro:IPR007457 3231925 3232590 gene locus_tag Alide2_3094 3231925 3232590 CDS product Uncharacterized protein family UPF0126 transl_table 11 protein_id gb|AEB85436.1||gnl|jgi|Alide2_3094 note PFAM: Uncharacterised protein family UPF0126~KEGG: dia:Dtpsy_1925 protein of unknown function UPF0126 inference protein motif:PFAM:PF03458 db_xref InterPro:IPR005115 3232587 3234470 gene locus_tag Alide2_3095 3232587 3234470 CDS product tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmC transl_table 11 protein_id gb|AEB85437.1||gnl|jgi|Alide2_3095 note TIGRFAM: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal~HAMAP: tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC~KEGG: dac:Daci_4644 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC~PFAM: FAD dependent oxidoreductase; Domain of unknown function DUF752 inference protein motif:HAMAP:MF_01102 db_xref InterPro:IPR006076 db_xref InterPro:IPR008471 db_xref InterPro:IPR017610 db_xref InterPro:IPR023032 3234580 3235383 gene locus_tag Alide2_3096 3234580 3235383 CDS product protein of unknown function DUF81 transl_table 11 protein_id gb|AEB85438.1||gnl|jgi|Alide2_3096 note PFAM: Protein of unknown function DUF81~KEGG: aav:Aave_3052 hypothetical protein inference protein motif:PFAM:PF01925 db_xref InterPro:IPR002781 3235410 3237197 gene locus_tag Alide2_3097 3235410 3237197 CDS product nitrite and sulphite reductase 4Fe-4S region transl_table 11 protein_id gb|AEB85439.1||gnl|jgi|Alide2_3097 note PFAM: Nitrite/sulphite reductase 4Fe-4S domain; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like~KEGG: dia:Dtpsy_1927 nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein inference protein motif:PFAM:PF01077 db_xref GO:0016491 db_xref GO:0020037 db_xref GO:0051536 db_xref InterPro:IPR005117 db_xref InterPro:IPR006067 3237227 3237622 gene locus_tag Alide2_3098 3237227 3237622 CDS product Uncharacterized conserved protein UCP030820 transl_table 11 protein_id gb|AEB85440.1||gnl|jgi|Alide2_3098 note PFAM: Uncharacterised conserved protein UCP030820~KEGG: dia:Dtpsy_1928 hypothetical protein inference protein motif:PFAM:PF06073 db_xref InterPro:IPR008318 3237619 3238242 gene locus_tag Alide2_3099 3237619 3238242 CDS product Phosphoadenylyl-sulfate reductase (thioredoxin) EC_number 1.8.4.8 transl_table 11 protein_id gb|AEB85441.1||gnl|jgi|Alide2_3099 note KEGG: ajs:Ajs_1793 phosphoadenylylsulfate reductase (thioredoxin)~PFAM: Phosphoadenosine phosphosulphate reductase inference protein motif:PRIAM:1.8.4.8 db_xref InterPro:IPR002500 3238308 3239264 gene locus_tag Alide2_3100 3238308 3239264 CDS product Sulfate adenylyltransferase EC_number 2.7.7.4 transl_table 11 protein_id gb|AEB85442.1||gnl|jgi|Alide2_3100 note KEGG: aav:Aave_3055 sulfate adenylyltransferase subunit 2~PFAM: Phosphoadenosine phosphosulphate reductase inference protein motif:PRIAM:2.7.7.4 db_xref InterPro:IPR002500 3239264 3240631 gene locus_tag Alide2_3101 3239264 3240631 CDS product sulfate adenylyltransferase, large subunit EC_number 2.7.7.4 transl_table 11 protein_id gb|AEB85443.1||gnl|jgi|Alide2_3101 note TIGRFAM: Sulphate adenylyltransferase, large subunit~KEGG: dia:Dtpsy_1931 sulfate adenylyltransferase, large subunit~PFAM: Protein synthesis factor, GTP-binding inference protein motif:TFAM:TIGR02034 db_xref GO:0003824 db_xref InterPro:IPR000795 db_xref InterPro:IPR011779 3240759 3241082 gene locus_tag Alide2_3102 3240759 3241082 CDS product Ferredoxin, C-terminal protein transl_table 11 protein_id gb|AEB85444.1||gnl|jgi|Alide2_3102 note PFAM: Ferredoxin, C-terminal; 4Fe-4S binding domain~KEGG: dia:Dtpsy_1932 4Fe-4S ferredoxin iron-sulfur binding domain protein inference protein motif:PFAM:PF11953 db_xref GO:0009055 db_xref GO:0051536 db_xref InterPro:IPR001450 db_xref InterPro:IPR022569 3241097 3242143 gene locus_tag Alide2_3103 3241097 3242143 CDS product Ferredoxin--NADP(+) reductase EC_number 1.18.1.2 transl_table 11 protein_id gb|AEB85445.1||gnl|jgi|Alide2_3103 note KEGG: dia:Dtpsy_1933 FAD-dependent pyridine nucleotide-disulphide oxidoreductase~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase inference protein motif:PRIAM:1.18.1.2 db_xref InterPro:IPR013027 3242140 3243411 gene locus_tag Alide2_3104 3242140 3243411 CDS product permease for cytosine/purines uracil thiamine allantoin transl_table 11 protein_id gb|AEB85446.1||gnl|jgi|Alide2_3104 note PFAM: Permease, cytosine/purines, uracil, thiamine, allantoin~KEGG: ctt:CtCNB1_2972 cytosine/purines/uracil permease inference protein motif:PFAM:PF02133 db_xref GO:0015205 db_xref InterPro:IPR001248 3243498 3243974 gene locus_tag Alide2_3105 3243498 3243974 CDS product SH3 type 3 domain protein transl_table 11 protein_id gb|AEB85447.1||gnl|jgi|Alide2_3105 note KEGG: dia:Dtpsy_1934 SH3 type 3 domain protein~PFAM: SH3, type 3; Protein of unknown function DUF1058~SMART: SH3-like domain, bacterial inference protein motif:PFAM:PF08239 db_xref InterPro:IPR003646 db_xref InterPro:IPR010466 db_xref InterPro:IPR013247 3244833 3243985 gene locus_tag Alide2_3106 3244833 3243985 CDS product phosphomethylpyrimidine kinase EC_number 2.7.4.7 transl_table 11 protein_id gb|AEB85448.1||gnl|jgi|Alide2_3106 note TIGRFAM: Phosphomethylpyrimidine kinase type-2~KEGG: ajs:Ajs_1787 phosphomethylpyrimidine kinase~PFAM: Phosphomethylpyrimidine kinase type-1 inference protein motif:TFAM:TIGR00097 db_xref GO:0008972 db_xref InterPro:IPR004399 db_xref InterPro:IPR013749 3244886 3244988 misc_binding note TPP riboswitch (THI element) as predicted by Rfam (RF00059), score 53.36 bound_moiety thiamin/thiaminpyrophosphate 3245028 3246146 gene locus_tag Alide2_3107 3245028 3246146 CDS product glycine oxidase ThiO transl_table 11 protein_id gb|AEB85449.1||gnl|jgi|Alide2_3107 note KEGG: dia:Dtpsy_1936 FAD dependent oxidoreductase~TIGRFAM: Glycine oxidase ThiO~PFAM: FAD dependent oxidoreductase inference protein motif:TFAM:TIGR02352 db_xref GO:0016491 db_xref GO:0050660 db_xref InterPro:IPR006076 db_xref InterPro:IPR012727 3246143 3246340 gene locus_tag Alide2_3108 3246143 3246340 CDS product thiamine biosynthesis protein ThiS transl_table 11 protein_id gb|AEB85450.1||gnl|jgi|Alide2_3108 note KEGG: dia:Dtpsy_1937 thiamine biosynthesis protein ThiS~TIGRFAM: ThiS, thiamine-biosynthesis~PFAM: ThiamineS inference protein motif:TFAM:TIGR01683 db_xref InterPro:IPR003749 db_xref InterPro:IPR010035 3246356 3247159 gene locus_tag Alide2_3109 3246356 3247159 CDS product Thiazole synthase transl_table 11 protein_id gb|AEB85451.1||gnl|jgi|Alide2_3109 note KEGG: dia:Dtpsy_1938 thiazole synthase~HAMAP: Thiazole biosynthesis~PFAM: Thiazole biosynthesis inference protein motif:HAMAP:MF_00443 db_xref InterPro:IPR008867 3247160 3248062 gene locus_tag Alide2_3110 3247160 3248062 CDS product Thiamine-phosphate diphosphorylase EC_number 2.5.1.3 transl_table 11 protein_id gb|AEB85452.1||gnl|jgi|Alide2_3110 note KEGG: dia:Dtpsy_1939 thiamine-phosphate pyrophosphorylase~PFAM: Thiamine monophosphate synthase inference protein motif:PRIAM:2.5.1.3 db_xref InterPro:IPR003733 3250091 3248073 gene locus_tag Alide2_3111 3250091 3248073 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85453.1||gnl|jgi|Alide2_3111 note KEGG: dia:Dtpsy_1940 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_1940 3250169 3251689 gene locus_tag Alide2_3112 3250169 3251689 CDS product 3-hydroxybutyryl-CoA dehydrogenase EC_number 1.1.1.157 transl_table 11 protein_id gb|AEB85454.1||gnl|jgi|Alide2_3112 note KEGG: dia:Dtpsy_1941 3-hydroxy-acyl-CoA dehydrogenase~PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal inference protein motif:PRIAM:1.1.1.157 db_xref InterPro:IPR006108 db_xref InterPro:IPR006176 3251700 3252479 gene locus_tag Alide2_3113 3251700 3252479 CDS product Enoyl-CoA hydratase/isomerase transl_table 11 protein_id gb|AEB85455.1||gnl|jgi|Alide2_3113 note PFAM: Crotonase, core~KEGG: dia:Dtpsy_1942 enoyl-CoA hydratase/isomerase inference protein motif:PFAM:PF00378 db_xref GO:0003824 db_xref InterPro:IPR001753 3252669 3253388 gene locus_tag Alide2_3114 3252669 3253388 CDS product transcriptional regulator, Crp/Fnr family transl_table 11 protein_id gb|AEB85456.1||gnl|jgi|Alide2_3114 note KEGG: ajs:Ajs_1779 Crp/FNR family transcriptional regulator~PFAM: Cyclic nucleotide-binding domain~SMART: Cyclic nucleotide-binding domain; HTH transcriptional regulator, Crp inference protein motif:PFAM:PF00027 db_xref InterPro:IPR000595 db_xref InterPro:IPR001808 3253444 3254535 gene locus_tag Alide2_3115 3253444 3254535 CDS product aminoglycoside phosphotransferase transl_table 11 protein_id gb|AEB85457.1||gnl|jgi|Alide2_3115 note PFAM: Aminoglycoside phosphotransferase~KEGG: ajs:Ajs_1778 aminoglycoside phosphotransferase inference protein motif:PFAM:PF01636 db_xref InterPro:IPR002575 3254551 3255792 gene locus_tag Alide2_3116 3254551 3255792 CDS product Isovaleryl-CoA dehydrogenase EC_number 1.3.99.10 transl_table 11 protein_id gb|AEB85458.1||gnl|jgi|Alide2_3116 note KEGG: dia:Dtpsy_1945 acyl-CoA dehydrogenase domain protein~PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal inference protein motif:PRIAM:1.3.99.10 db_xref InterPro:IPR006090 db_xref InterPro:IPR006091 db_xref InterPro:IPR006092 3255938 3259933 gene locus_tag Alide2_3117 3255938 3259933 CDS product delta-1-pyrroline-5-carboxylate dehydrogenase transl_table 11 protein_id gb|AEB85459.1||gnl|jgi|Alide2_3117 note KEGG: dac:Daci_5941 trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase~TIGRFAM: Delta-1-pyrroline-5-carboxylate dehydrogenase 3~PFAM: Proline dehydrogenase; Aldehyde dehydrogenase domain inference protein motif:TFAM:TIGR01238 db_xref GO:0003842 db_xref InterPro:IPR002872 db_xref InterPro:IPR005933 db_xref InterPro:IPR015590 3260136 3261638 gene locus_tag Alide2_3118 3260136 3261638 CDS product SSS sodium solute transporter superfamily transl_table 11 protein_id gb|AEB85460.1||gnl|jgi|Alide2_3118 note KEGG: dac:Daci_5942 sodium/proline symporter~TIGRFAM: Sodium/solute symporter, subgroup; Sodium/proline symporter~PFAM: Sodium/solute symporter inference protein motif:TFAM:TIGR00813 db_xref GO:0005298 db_xref GO:0031402 db_xref InterPro:IPR001734 db_xref InterPro:IPR011851 db_xref InterPro:IPR019900 3261722 3262534 gene locus_tag Alide2_3119 3261722 3262534 CDS product transcriptional regulator, IclR family transl_table 11 protein_id gb|AEB85461.1||gnl|jgi|Alide2_3119 note KEGG: dia:Dtpsy_1946 transcriptional regulator, IclR family~PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal~SMART: Transcription regulator IclR, N-terminal inference protein motif:PFAM:PF01614 db_xref GO:0003677 db_xref InterPro:IPR005471 db_xref InterPro:IPR014757 3263666 3262572 gene locus_tag Alide2_3120 3263666 3262572 CDS product peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 transl_table 11 protein_id gb|AEB85462.1||gnl|jgi|Alide2_3120 note PFAM: Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal~KEGG: ajs:Ajs_1775 murein-dd-endopeptidase inference protein motif:PFAM:PF00768 db_xref GO:0009002 db_xref InterPro:IPR001967 3265323 3263782 gene locus_tag Alide2_3121 3265323 3263782 CDS product 2-isopropylmalate synthase EC_number 2.3.3.13 transl_table 11 protein_id gb|AEB85463.1||gnl|jgi|Alide2_3121 note SMART: 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain~TIGRFAM: 2-isopropylmalate synthase, bacterial type~KEGG: ajs:Ajs_1774 2-isopropylmalate synthase~PFAM: Pyruvate carboxyltransferase; 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain inference protein motif:TFAM:TIGR00973 db_xref GO:0003852 db_xref InterPro:IPR000891 db_xref InterPro:IPR005671 db_xref InterPro:IPR013709 3267026 3265359 gene locus_tag Alide2_3122 3267026 3265359 CDS product 2-isopropylmalate synthase EC_number 2.3.3.13 transl_table 11 protein_id gb|AEB85464.1||gnl|jgi|Alide2_3122 note SMART: 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain~TIGRFAM: Yeast 2-isopropylmalate synthase~KEGG: dia:Dtpsy_1949 2-isopropylmalate synthase~PFAM: Pyruvate carboxyltransferase; 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain inference protein motif:TFAM:TIGR00970 db_xref GO:0003852 db_xref InterPro:IPR000891 db_xref InterPro:IPR005668 db_xref InterPro:IPR013709 3268142 3267234 gene locus_tag Alide2_3123 3268142 3267234 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB85465.1||gnl|jgi|Alide2_3123 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: pol:Bpro_3346 LysR family transcriptional regulator inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 3268275 3268829 gene locus_tag Alide2_3124 3268275 3268829 CDS product Glyoxalase/bleomycin resistance protein/dioxygenase transl_table 11 protein_id gb|AEB85466.1||gnl|jgi|Alide2_3124 note PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase~KEGG: azo:azo3679 glyoxalase-family protein inference protein motif:PFAM:PF00903 db_xref InterPro:IPR004360 3268858 3270231 gene locus_tag Alide2_3125 3268858 3270231 CDS product major facilitator superfamily MFS_1 transl_table 11 protein_id gb|AEB85467.1||gnl|jgi|Alide2_3125 note PFAM: Major facilitator superfamily MFS-1~KEGG: hse:Hsero_1116 4-hydroxybenzoate transporter transmembrane protein inference protein motif:PFAM:PF07690 db_xref InterPro:IPR011701 3270307 3271320 gene locus_tag Alide2_3126 3270307 3271320 CDS product fumarylacetoacetate (FAA) hydrolase transl_table 11 protein_id gb|AEB85468.1||gnl|jgi|Alide2_3126 note PFAM: Fumarylacetoacetase, C-terminal-like~KEGG: tmz:Tmz1t_0853 fumarylacetoacetate (FAA) hydrolase inference protein motif:PFAM:PF01557 db_xref GO:0003824 db_xref InterPro:IPR002529 3271331 3271999 gene locus_tag Alide2_3127 3271331 3271999 CDS product maleylacetoacetate isomerase EC_number 5.2.1.2 transl_table 11 protein_id gb|AEB85469.1||gnl|jgi|Alide2_3127 note TIGRFAM: Maleylacetoacetate isomerase~KEGG: xtr:100496290 probable maleylacetoacetate isomerase-like~PFAM: Glutathione S-transferase, N-terminal inference protein motif:TFAM:TIGR01262 db_xref GO:0003824 db_xref InterPro:IPR004045 db_xref InterPro:IPR005955 3272860 3272024 gene locus_tag Alide2_3128 3272860 3272024 CDS product CDP-diacylglycerol/serine O-phosphatidyltransferase transl_table 11 protein_id gb|AEB85470.1||gnl|jgi|Alide2_3128 note KEGG: xtr:100496448 CDP-diacylglycerol--serine O-phosphatidyltransferase-like~TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase~PFAM: CDP-alcohol phosphatidyltransferase inference protein motif:TFAM:TIGR00473 db_xref GO:0003882 db_xref InterPro:IPR000462 db_xref InterPro:IPR004533 3274054 3273038 gene locus_tag Alide2_3129 3274054 3273038 CDS product ketol-acid reductoisomerase EC_number 1.1.1.86 transl_table 11 protein_id gb|AEB85471.1||gnl|jgi|Alide2_3129 note TIGRFAM: Acetohydroxy acid isomeroreductase~KEGG: dia:Dtpsy_1951 ketol-acid reductoisomerase~PFAM: Acetohydroxy acid isomeroreductase, catalytic; Acetohydroxy acid isomeroreductase C-terminal inference protein motif:TFAM:TIGR00465 db_xref GO:0016491 db_xref InterPro:IPR000506 db_xref InterPro:IPR013023 db_xref InterPro:IPR013116 3274614 3274123 gene locus_tag Alide2_3130 3274614 3274123 CDS product acetolactate synthase, small subunit transl_table 11 protein_id gb|AEB85472.1||gnl|jgi|Alide2_3130 note KEGG: ctt:CtCNB1_1659 acetolactate synthase, small subunit~TIGRFAM: Acetolactate synthase, small subunit~PFAM: Acetolactate synthase, small subunit, C-terminal; Amino acid-binding ACT inference protein motif:TFAM:TIGR00119 db_xref GO:0003984 db_xref InterPro:IPR002912 db_xref InterPro:IPR004789 db_xref InterPro:IPR019455 3276595 3274802 gene locus_tag Alide2_3131 3276595 3274802 CDS product acetolactate synthase, large subunit, biosynthetic type EC_number 2.2.1.6 transl_table 11 protein_id gb|AEB85473.1||gnl|jgi|Alide2_3131 note TIGRFAM: Acetolactate synthase, large subunit, biosynthetic~KEGG: ajs:Ajs_1769 acetolactate synthase 3 catalytic subunit~PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Thiamine pyrophosphate enzyme, central domain inference protein motif:TFAM:TIGR00118 db_xref GO:0000287 db_xref GO:0003984 db_xref GO:0030976 db_xref GO:0050660 db_xref InterPro:IPR011766 db_xref InterPro:IPR012000 db_xref InterPro:IPR012001 db_xref InterPro:IPR012846 3276884 3277453 gene locus_tag Alide2_3132 3276884 3277453 CDS product RNA polymerase, sigma-24 subunit, ECF subfamily transl_table 11 protein_id gb|AEB85474.1||gnl|jgi|Alide2_3132 note KEGG: dia:Dtpsy_1954 RNA polymerase factor sigma-70~TIGRFAM: RNA polymerase sigma-70~PFAM: RNA polymerase sigma factor 70, region 4 type 2 inference protein motif:TFAM:TIGR02937 db_xref GO:0003677 db_xref GO:0003700 db_xref GO:0016987 db_xref InterPro:IPR013249 db_xref InterPro:IPR014284 3277450 3277911 gene locus_tag Alide2_3133 3277450 3277911 CDS product Protein of unknown function DUF3619 transl_table 11 protein_id gb|AEB85475.1||gnl|jgi|Alide2_3133 note PFAM: Protein of unknown function DUF3619~KEGG: dia:Dtpsy_1955 putative transmembrane protein inference protein motif:PFAM:PF12279 db_xref InterPro:IPR022064 3277935 3278759 gene locus_tag Alide2_3134 3277935 3278759 CDS product Protein of unknown function DUF3106 transl_table 11 protein_id gb|AEB85476.1||gnl|jgi|Alide2_3134 note PFAM: Protein of unknown function DUF3106~KEGG: ajs:Ajs_1766 putative transmembrane protein inference protein motif:PFAM:PF11304 db_xref InterPro:IPR021455 3278787 3279359 gene locus_tag Alide2_3135 3278787 3279359 CDS product RDD domain containing protein transl_table 11 protein_id gb|AEB85477.1||gnl|jgi|Alide2_3135 note PFAM: RDD~KEGG: ajs:Ajs_1765 RDD domain-containing protein inference protein motif:PFAM:PF06271 db_xref InterPro:IPR010432 3279422 3279820 gene locus_tag Alide2_3136 3279422 3279820 CDS product diacylglycerol kinase transl_table 11 protein_id gb|AEB85478.1||gnl|jgi|Alide2_3136 note PFAM: Diacylglycerol kinase, prokaryotic~KEGG: dia:Dtpsy_1958 diacylglycerol kinase inference protein motif:PFAM:PF01219 db_xref GO:0004143 db_xref InterPro:IPR000829 3279813 3280406 gene locus_tag Alide2_3137 3279813 3280406 CDS product Conserved hypothetical protein CHP00730 transl_table 11 protein_id gb|AEB85479.1||gnl|jgi|Alide2_3137 note KEGG: dia:Dtpsy_1959 hypothetical protein~TIGRFAM: Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG~PFAM: Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG inference protein motif:TFAM:TIGR00730 db_xref InterPro:IPR005269 3280754 3280416 gene locus_tag Alide2_3138 3280754 3280416 CDS product nitrogen regulatory protein P-II transl_table 11 protein_id gb|AEB85480.1||gnl|jgi|Alide2_3138 note KEGG: dia:Dtpsy_1960 nitrogen regulatory protein P-II~PFAM: Nitrogen regulatory protein PII~SMART: Nitrogen regulatory protein PII inference protein motif:PFAM:PF00543 db_xref GO:0030234 db_xref InterPro:IPR002187 3282463 3280805 gene locus_tag Alide2_3139 3282463 3280805 CDS product NAD+ synthetase EC_number 6.3.5.1 transl_table 11 protein_id gb|AEB85481.1||gnl|jgi|Alide2_3139 note TIGRFAM: NAD synthase~KEGG: vei:Veis_1737 NAD+ synthetase~PFAM: NAD/GMP synthase; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase inference protein motif:TFAM:TIGR00552 db_xref GO:0003952 db_xref GO:0005524 db_xref InterPro:IPR003010 db_xref InterPro:IPR003694 db_xref InterPro:IPR022310 3282586 3282726 gene locus_tag Alide2_3140 pseudo 3282758 3283981 gene locus_tag Alide2_3141 3282758 3283981 CDS product protein of unknown function DUF482 transl_table 11 protein_id gb|AEB85482.1||gnl|jgi|Alide2_3141 note PFAM: Protein of unknown function DUF482~KEGG: vei:Veis_1736 hypothetical protein inference protein motif:PFAM:PF04339 db_xref InterPro:IPR007434 3285735 3283978 gene locus_tag Alide2_3142 3285735 3283978 CDS product methyl-accepting chemotaxis sensory transducer transl_table 11 protein_id gb|AEB85483.1||gnl|jgi|Alide2_3142 note KEGG: ajs:Ajs_0364 methyl-accepting chemotaxis sensory transducer~PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain~SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain inference protein motif:PFAM:PF00015 db_xref GO:0004871 db_xref InterPro:IPR003660 db_xref InterPro:IPR004089 3286254 3285748 gene locus_tag Alide2_3143 3286254 3285748 CDS product CheW protein transl_table 11 protein_id gb|AEB85484.1||gnl|jgi|Alide2_3143 note KEGG: ajs:Ajs_1759 putative CheW protein~PFAM: CheW-like protein~SMART: CheW-like protein inference protein motif:PFAM:PF01584 db_xref GO:0004871 db_xref InterPro:IPR002545 3286989 3286456 gene locus_tag Alide2_3144 3286989 3286456 CDS product Inorganic diphosphatase EC_number 3.6.1.1 transl_table 11 protein_id gb|AEB85485.1||gnl|jgi|Alide2_3144 note KEGG: dia:Dtpsy_1964 inorganic diphosphatase~PFAM: Inorganic pyrophosphatase inference protein motif:PRIAM:3.6.1.1 db_xref InterPro:IPR008162 3287204 3289285 gene locus_tag Alide2_3145 3287204 3289285 CDS product Pyrophosphate-energized proton pump EC_number 3.6.1.1 transl_table 11 protein_id gb|AEB85486.1||gnl|jgi|Alide2_3145 note PFAM: Pyrophosphate-energised proton pump~TIGRFAM: Pyrophosphate-energised proton pump~HAMAP: Pyrophosphate-energised proton pump~KEGG: dia:Dtpsy_1965 membrane-bound proton-translocating pyrophosphatase inference protein motif:HAMAP:MF_01130 db_xref InterPro:IPR004131 3289450 3290883 gene locus_tag Alide2_3146 3289450 3290883 CDS product Aldehyde Dehydrogenase transl_table 11 protein_id gb|AEB85487.1||gnl|jgi|Alide2_3146 note PFAM: Aldehyde dehydrogenase domain~KEGG: dia:Dtpsy_1966 aldehyde dehydrogenase inference protein motif:PFAM:PF00171 db_xref GO:0016491 db_xref InterPro:IPR015590 3290893 3291450 gene locus_tag Alide2_3147 3290893 3291450 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85488.1||gnl|jgi|Alide2_3147 note KEGG: ajs:Ajs_1755 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1755 3292341 3291499 gene locus_tag Alide2_3148 3292341 3291499 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85489.1||gnl|jgi|Alide2_3148 note KEGG: dia:Dtpsy_1968 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_1968 3292469 3293638 gene locus_tag Alide2_3149 3292469 3293638 CDS product molybdenum cofactor biosynthesis protein A transl_table 11 protein_id gb|AEB85490.1||gnl|jgi|Alide2_3149 note TIGRFAM: Molybdenum cofactor biosynthesis protein A~PFAM: Molybdenum cofactor synthesis C-terminal; Radical SAM~KEGG: dia:Dtpsy_1969 molybdenum cofactor biosynthesis protein A~SMART: Elongator protein 3/MiaB/NifB inference protein motif:TFAM:TIGR02666 db_xref GO:0046872 db_xref InterPro:IPR006638 db_xref InterPro:IPR007197 db_xref InterPro:IPR010505 db_xref InterPro:IPR013483 3293642 3294274 gene locus_tag Alide2_3150 3293642 3294274 CDS product molybdopterin-guanine dinucleotide biosynthesis protein A transl_table 11 protein_id gb|AEB85491.1||gnl|jgi|Alide2_3150 note TIGRFAM: Molybdopterin-guanine dinucleotide biosynthesis protein A~KEGG: dia:Dtpsy_1970 molybdopterin-guanine dinucleotide biosynthesis protein MobA inference protein motif:TFAM:TIGR02665 db_xref GO:0003824 db_xref InterPro:IPR013482 3294271 3294846 gene locus_tag Alide2_3151 3294271 3294846 CDS product GCN5-related N-acetyltransferase transl_table 11 protein_id gb|AEB85492.1||gnl|jgi|Alide2_3151 note PFAM: GCN5-related N-acetyltransferase (GNAT) domain~KEGG: aav:Aave_2657 GCN5-related N-acetyltransferase inference protein motif:PFAM:PF00583 db_xref GO:0008080 db_xref InterPro:IPR000182 3294833 3296191 gene locus_tag Alide2_3152 3294833 3296191 CDS product molybdenum cofactor synthesis domain protein transl_table 11 protein_id gb|AEB85493.1||gnl|jgi|Alide2_3152 note TIGRFAM: Molybdenum cofactor synthesis~PFAM: Molybdopterin binding; MoeA, N-terminal and linker domain; MoeA, C-terminal, domain IV~KEGG: dia:Dtpsy_1971 molybdenum cofactor synthesis domain protein~SMART: Molybdopterin binding inference protein motif:TFAM:TIGR00177 db_xref InterPro:IPR001453 db_xref InterPro:IPR005110 db_xref InterPro:IPR005111 db_xref InterPro:IPR020817 3296193 3296519 gene locus_tag Alide2_3153 3296193 3296519 CDS product Thioredoxin domain-containing protein transl_table 11 protein_id gb|AEB85494.1||gnl|jgi|Alide2_3153 note PFAM: Thioredoxin domain~KEGG: dia:Dtpsy_1972 thioredoxin domain protein inference protein motif:PFAM:PF00085 db_xref InterPro:IPR013766 3296516 3296902 gene locus_tag Alide2_3154 3296516 3296902 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85495.1||gnl|jgi|Alide2_3154 note KEGG: dac:Daci_4475 hypothetical protein inference similar to AA sequence:KEGG:Daci_4475 3297875 3296889 gene locus_tag Alide2_3155 3297875 3296889 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85496.1||gnl|jgi|Alide2_3155 note KEGG: bbr:BB4338 hypothetical protein inference similar to AA sequence:KEGG:BB4338 db_xref InterPro:IPR005064 3298632 3297955 gene locus_tag Alide2_3156 3298632 3297955 CDS product Dimethylmenaquinone methyltransferase transl_table 11 protein_id gb|AEB85497.1||gnl|jgi|Alide2_3156 note PFAM: Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase~KEGG: rsl:RPSI07_mp1263 dimethylmenaquinone methyltransferase; protein inference protein motif:PFAM:PF03737 db_xref InterPro:IPR005493 3299570 3298668 gene locus_tag Alide2_3157 3299570 3298668 CDS product ABC-type transporter, periplasmic subunit family 3 transl_table 11 protein_id gb|AEB85498.1||gnl|jgi|Alide2_3157 note KEGG: aav:Aave_4073 extracellular solute-binding protein~PFAM: Extracellular solute-binding protein, family 3~SMART: Extracellular solute-binding protein, family 3 inference protein motif:PFAM:PF00497 db_xref GO:0005215 db_xref InterPro:IPR001638 3300650 3299724 gene locus_tag Alide2_3158 3300650 3299724 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB85499.1||gnl|jgi|Alide2_3158 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: rso:RS03179 transcription regulator protein inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 3300789 3301463 gene locus_tag Alide2_3159 3300789 3301463 CDS product Dimethylmenaquinone methyltransferase transl_table 11 protein_id gb|AEB85500.1||gnl|jgi|Alide2_3159 note PFAM: Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase~KEGG: app:CAP2UW1_2990 dimethylmenaquinone methyltransferase inference protein motif:PFAM:PF03737 db_xref InterPro:IPR005493 3301469 3302101 gene locus_tag Alide2_3160 3301469 3302101 CDS product Dimethylmenaquinone methyltransferase transl_table 11 protein_id gb|AEB85501.1||gnl|jgi|Alide2_3160 note PFAM: Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase~KEGG: app:CAP2UW1_2989 dimethylmenaquinone methyltransferase inference protein motif:PFAM:PF03737 db_xref InterPro:IPR005493 3302098 3303315 gene locus_tag Alide2_3161 3302098 3303315 CDS product Aspartate transaminase EC_number 2.6.1.1 transl_table 11 protein_id gb|AEB85502.1||gnl|jgi|Alide2_3161 note KEGG: rso:RSp1232 aspartate aminotransferase A protein~PFAM: Aminotransferase, class I/classII inference protein motif:PRIAM:2.6.1.1 db_xref InterPro:IPR004839 3303864 3303418 gene locus_tag Alide2_3162 3303864 3303418 CDS product Ribonuclease H transl_table 11 protein_id gb|AEB85503.1||gnl|jgi|Alide2_3162 note KEGG: dia:Dtpsy_1973 ribonuclease H~HAMAP: Ribonuclease H~PFAM: Ribonuclease H domain inference protein motif:HAMAP:MF_00042 db_xref InterPro:IPR002156 db_xref InterPro:IPR022892 3304692 3303910 gene locus_tag Alide2_3163 3304692 3303910 CDS product Methyltransferase type 11 transl_table 11 protein_id gb|AEB85504.1||gnl|jgi|Alide2_3163 note PFAM: Methyltransferase type 11~KEGG: ajs:Ajs_1744 methyltransferase type 11 inference protein motif:PFAM:PF08241 db_xref GO:0008168 db_xref InterPro:IPR013216 3304697 3305467 gene locus_tag Alide2_3164 3304697 3305467 CDS product Hydroxyacylglutathione hydrolase transl_table 11 protein_id gb|AEB85505.1||gnl|jgi|Alide2_3164 note SMART: Beta-lactamase-like~TIGRFAM: Hydroxyacylglutathione hydrolase~KEGG: dia:Dtpsy_1975 hydroxyacylglutathione hydrolase~HAMAP: Hydroxyacylglutathione hydrolase~PFAM: Beta-lactamase-like inference protein motif:HAMAP:MF_01374 db_xref InterPro:IPR001279 db_xref InterPro:IPR017782 3305464 3306978 gene locus_tag Alide2_3165 3305464 3306978 CDS product Lytic transglycosylase catalytic transl_table 11 protein_id gb|AEB85506.1||gnl|jgi|Alide2_3165 note PFAM: Lytic transglycosylase-like, catalytic; MLTD-N; Peptidoglycan-binding lysin domain~KEGG: ajs:Ajs_1742 lytic transglycosylase, catalytic inference protein motif:PFAM:PF01464 db_xref InterPro:IPR008258 db_xref InterPro:IPR010511 db_xref InterPro:IPR018392 3307148 3306996 gene locus_tag Alide2_3166 3307148 3306996 CDS product Protein of unknown function DUF3096 transl_table 11 protein_id gb|AEB85507.1||gnl|jgi|Alide2_3166 note PFAM: Protein of unknown function DUF3096~KEGG: dia:Dtpsy_1977 hypothetical protein inference protein motif:PFAM:PF11295 db_xref InterPro:IPR021446 3308296 3307247 gene locus_tag Alide2_3167 3308296 3307247 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85508.1||gnl|jgi|Alide2_3167 note KEGG: aav:Aave_2648 putative signal peptide protein inference similar to AA sequence:KEGG:Aave_2648 db_xref InterPro:IPR015168 3308714 3310030 gene locus_tag Alide2_3168 3308714 3310030 CDS product integrase family protein transl_table 11 protein_id gb|AEB85509.1||gnl|jgi|Alide2_3168 note PFAM: Integrase, catalytic core, phage~KEGG: ajs:Ajs_3340 phage integrase family protein inference protein motif:PFAM:PF00589 db_xref GO:0003677 db_xref InterPro:IPR002104 3310130 3310711 gene locus_tag Alide2_3169 3310130 3310711 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85510.1||gnl|jgi|Alide2_3169 note KEGG: eba:ebA218 hypothetical protein inference similar to AA sequence:KEGG:ebA218 3310864 3311067 gene locus_tag Alide2_3170 3310864 3311067 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85511.1||gnl|jgi|Alide2_3170 note KEGG: vap:Vapar_3801 hypothetical protein inference similar to AA sequence:KEGG:Vapar_3801 3311068 3311418 gene locus_tag Alide2_3171 3311068 3311418 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85512.1||gnl|jgi|Alide2_3171 note KEGG: hsm:HSM_1673 hypothetical protein inference similar to AA sequence:KEGG:HSM_1673 3311420 3312136 gene locus_tag Alide2_3172 3311420 3312136 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85513.1||gnl|jgi|Alide2_3172 note KEGG: ajs:Ajs_1730 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1730 3312251 3313054 gene locus_tag Alide2_3173 3312251 3313054 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85514.1||gnl|jgi|Alide2_3173 note KEGG: vap:Vapar_3798 hypothetical protein inference similar to AA sequence:KEGG:Vapar_3798 3313136 3313405 gene locus_tag Alide2_3174 3313136 3313405 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85515.1||gnl|jgi|Alide2_3174 note KEGG: vap:Vapar_3797 hypothetical protein inference similar to AA sequence:KEGG:Vapar_3797 3313390 3313608 gene locus_tag Alide2_3175 3313390 3313608 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85516.1||gnl|jgi|Alide2_3175 inference ab initio prediction:Prodigal:1.4 3313605 3313823 gene locus_tag Alide2_3176 3313605 3313823 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85517.1||gnl|jgi|Alide2_3176 inference ab initio prediction:Prodigal:1.4 3313807 3314055 gene locus_tag Alide2_3177 3313807 3314055 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85518.1||gnl|jgi|Alide2_3177 inference ab initio prediction:Prodigal:1.4 3314045 3314311 gene locus_tag Alide2_3178 3314045 3314311 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85519.1||gnl|jgi|Alide2_3178 note KEGG: ctt:CtCNB1_2998 hypothetical protein inference similar to AA sequence:KEGG:CtCNB1_2998 3314821 3314746 gene locus_tag Alide2_R0040 note tRNA-Lys2 3314821 3314746 tRNA product tRNA-Lys 3315632 3314868 gene locus_tag Alide2_3179 3315632 3314868 CDS product UBA/THIF-type NAD/FAD binding protein transl_table 11 protein_id gb|AEB85520.1||gnl|jgi|Alide2_3179 note PFAM: UBA/THIF-type NAD/FAD binding fold~KEGG: aav:Aave_3403 UBA/ThiF-type NAD/FAD binding protein inference protein motif:PFAM:PF00899 db_xref GO:0003824 db_xref InterPro:IPR000594 3316429 3315641 gene locus_tag Alide2_3180 3316429 3315641 CDS product tol-pal system protein YbgF transl_table 11 protein_id gb|AEB85521.1||gnl|jgi|Alide2_3180 note TIGRFAM: Tol-Pal system, YbgF~KEGG: ajs:Ajs_1725 TPR repeat-containing protein inference protein motif:TFAM:TIGR02795 db_xref InterPro:IPR014162 3316971 3316429 gene locus_tag Alide2_3181 3316971 3316429 CDS product peptidoglycan-associated lipoprotein transl_table 11 protein_id gb|AEB85522.1||gnl|jgi|Alide2_3181 note KEGG: dia:Dtpsy_1980 peptidoglycan-associated lipoprotein~TIGRFAM: Peptidoglycan-associated lipoprotein~PFAM: Outer membrane protein, OmpA/MotB, C-terminal inference protein motif:TFAM:TIGR02802 db_xref InterPro:IPR006665 db_xref InterPro:IPR014169 3318337 3317015 gene locus_tag Alide2_3182 3318337 3317015 CDS product Tol-Pal system beta propeller repeat protein TolB transl_table 11 protein_id gb|AEB85523.1||gnl|jgi|Alide2_3182 note KEGG: dia:Dtpsy_1981 translocation protein TolB~TIGRFAM: Tol-Pal system beta propeller repeat-containing protein, TolB~PFAM: TolB, N-terminal; WD40-like Beta Propeller inference protein motif:TFAM:TIGR02800 db_xref InterPro:IPR007195 db_xref InterPro:IPR011659 db_xref InterPro:IPR014167 3318471 3320252 gene locus_tag Alide2_3183 3318471 3320252 CDS product lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA EC_number 3.6.3.44 transl_table 11 protein_id gb|AEB85524.1||gnl|jgi|Alide2_3183 note SMART: ATPase, AAA+ type, core~TIGRFAM: ABC transporter, lipid A export, MsbA~KEGG: dia:Dtpsy_1982 lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA~PFAM: ABC transporter, transmembrane domain; ABC transporter-like inference protein motif:TFAM:TIGR02203 db_xref GO:0005524 db_xref InterPro:IPR001140 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 db_xref InterPro:IPR011917 3322057 3320315 gene locus_tag Alide2_3184 3322057 3320315 CDS product Biotin carboxylase EC_number 6.3.4.14 transl_table 11 protein_id gb|AEB85525.1||gnl|jgi|Alide2_3184 note PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Biotin carboxylase, C-terminal; Carbamoyl-phosphate synthase, large subunit, N-terminal; Biotin/lipoyl attachment~KEGG: dac:Daci_5726 carbamoyl-phosphate synthase subunit L~SMART: Biotin carboxylase, C-terminal inference protein motif:PRIAM:6.3.4.14 db_xref InterPro:IPR000089 db_xref InterPro:IPR005479 db_xref InterPro:IPR005481 db_xref InterPro:IPR005482 3323652 3322051 gene locus_tag Alide2_3185 3323652 3322051 CDS product urea amidolyase related protein EC_number 6.3.4.6 transl_table 11 protein_id gb|AEB85526.1||gnl|jgi|Alide2_3185 note SMART: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1~TIGRFAM: Allophanate hydrolase subunit 2; Conserved hypothetical protein CHP00370~KEGG: reu:Reut_A2450 allophanate hydrolase subunit 2~PFAM: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1 inference protein motif:TFAM:TIGR00724 db_xref InterPro:IPR003778 db_xref InterPro:IPR003833 db_xref InterPro:IPR010016 3324472 3323660 gene locus_tag Alide2_3186 3324472 3323660 CDS product protein of unknown function DUF1445 transl_table 11 protein_id gb|AEB85527.1||gnl|jgi|Alide2_3186 note PFAM: Protein of unknown function DUF1445~KEGG: reh:H16_B1759 hypothetical protein inference protein motif:PFAM:PF07286 db_xref InterPro:IPR009906 3325256 3324495 gene locus_tag Alide2_3187 3325256 3324495 CDS product LamB/YcsF family protein transl_table 11 protein_id gb|AEB85528.1||gnl|jgi|Alide2_3187 note PFAM: Uncharacterised protein family UPF0271, LamB/YcsF~KEGG: aav:Aave_3513 LamB/YcsF family protein inference protein motif:PFAM:PF03746 db_xref InterPro:IPR005501 3326531 3325284 gene locus_tag Alide2_3188 3326531 3325284 CDS product General substrate transporter transl_table 11 protein_id gb|AEB85529.1||gnl|jgi|Alide2_3188 note PFAM: General substrate transporter~KEGG: reh:H16_B1760 major facilitator superfamily transporter AAHS family protein inference protein motif:PFAM:PF00083 db_xref GO:0005215 db_xref InterPro:IPR005828 3326795 3327472 gene locus_tag Alide2_3189 3326795 3327472 CDS product transcriptional regulator, GntR family transl_table 11 protein_id gb|AEB85530.1||gnl|jgi|Alide2_3189 note KEGG: aav:Aave_3515 GntR family transcriptional regulator~PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR~SMART: GntR, C-terminal; HTH transcriptional regulator, GntR inference protein motif:PFAM:PF07729 db_xref GO:0003700 db_xref InterPro:IPR000524 db_xref InterPro:IPR011711 3328693 3327476 gene locus_tag Alide2_3190 3328693 3327476 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85531.1||gnl|jgi|Alide2_3190 note KEGG: app:CAP2UW1_0424 hypothetical protein inference similar to AA sequence:KEGG:CAP2UW1_0424 3328970 3328725 gene locus_tag Alide2_3191 3328970 3328725 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85532.1||gnl|jgi|Alide2_3191 inference ab initio prediction:Prodigal:1.4 3329845 3329165 gene locus_tag Alide2_3192 3329845 3329165 CDS product Ankyrin transl_table 11 protein_id gb|AEB85533.1||gnl|jgi|Alide2_3192 note PFAM: Ankyrin repeat~KEGG: dia:Dtpsy_1983 ankyrin inference protein motif:PFAM:PF00023 db_xref InterPro:IPR002110 3330651 3329842 gene locus_tag Alide2_3193 3330651 3329842 CDS product hydrolase, TatD family transl_table 11 protein_id gb|AEB85534.1||gnl|jgi|Alide2_3193 note KEGG: ajs:Ajs_1720 TatD family hydrolase~TIGRFAM: Deoxyribonuclease, TatD Mg-dependent, prokaryote~PFAM: Deoxyribonuclease, TatD-related inference protein motif:TFAM:TIGR00010 db_xref GO:0003700 db_xref InterPro:IPR001130 db_xref InterPro:IPR015991 3331072 3330713 gene locus_tag Alide2_3194 3331072 3330713 CDS product type IV pilus assembly PilZ transl_table 11 protein_id gb|AEB85535.1||gnl|jgi|Alide2_3194 note PFAM: Type IV pilus assembly PilZ~KEGG: dia:Dtpsy_1985 type IV pilus assembly PilZ inference protein motif:PFAM:PF07238 db_xref InterPro:IPR009875 3332084 3331089 gene locus_tag Alide2_3195 3332084 3331089 CDS product DNA-directed DNA polymerase transl_table 11 protein_id gb|AEB85536.1||gnl|jgi|Alide2_3195 note KEGG: ajs:Ajs_1718 DNA-directed DNA polymerase inference similar to AA sequence:KEGG:Ajs_1718 3332737 3332081 gene locus_tag Alide2_3196 3332737 3332081 CDS product Thymidylate kinase EC_number 2.7.4.9 transl_table 11 protein_id gb|AEB85537.1||gnl|jgi|Alide2_3196 note PFAM: Thymidylate kinase~TIGRFAM: Thymidylate kinase~HAMAP: Thymidylate kinase~KEGG: dia:Dtpsy_1987 thymidylate kinase inference protein motif:HAMAP:MF_00165 db_xref InterPro:IPR018094 3333729 3332734 gene locus_tag Alide2_3197 3333729 3332734 CDS product aminodeoxychorismate lyase transl_table 11 protein_id gb|AEB85538.1||gnl|jgi|Alide2_3197 note KEGG: ajs:Ajs_1716 aminodeoxychorismate lyase~TIGRFAM: Uncharacterised protein family UPF0755~PFAM: Uncharacterised protein family UPF0755 inference protein motif:TFAM:TIGR00247 db_xref InterPro:IPR003770 3333776 3334717 gene locus_tag Alide2_3198 3333776 3334717 CDS product folate-binding protein YgfZ transl_table 11 protein_id gb|AEB85539.1||gnl|jgi|Alide2_3198 note KEGG: ajs:Ajs_1715 glycine cleavage T protein (aminomethyl transferase)~TIGRFAM: Folate-binding, YgfZ~PFAM: Glycine cleavage T-protein, N-terminal; Glycine cleavage T-protein, C-terminal barrel inference protein motif:TFAM:TIGR03317 db_xref InterPro:IPR006222 db_xref InterPro:IPR013977 db_xref InterPro:IPR017703 3334751 3335242 gene locus_tag Alide2_3199 3334751 3335242 CDS product CMP/dCMP deaminase zinc-binding protein transl_table 11 protein_id gb|AEB85540.1||gnl|jgi|Alide2_3199 note PFAM: CMP/dCMP deaminase, zinc-binding~KEGG: dia:Dtpsy_2009 CMP/dCMP deaminase zinc-binding inference protein motif:PFAM:PF00383 db_xref GO:0008270 db_xref GO:0016787 db_xref InterPro:IPR002125 3335235 3336428 gene locus_tag Alide2_3200 3335235 3336428 CDS product major facilitator superfamily MFS_1 transl_table 11 protein_id gb|AEB85541.1||gnl|jgi|Alide2_3200 note PFAM: Major facilitator superfamily MFS-1~KEGG: dac:Daci_2202 major facilitator transporter inference protein motif:PFAM:PF07690 db_xref InterPro:IPR011701 3336451 3337932 gene locus_tag Alide2_3201 3336451 3337932 CDS product integral membrane sensor signal transduction histidine kinase transl_table 11 protein_id gb|AEB85542.1||gnl|jgi|Alide2_3201 note KEGG: dac:Daci_1205 histidine kinase~PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain~SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain inference protein motif:PFAM:PF02518 db_xref GO:0000155 db_xref GO:0005524 db_xref InterPro:IPR003594 db_xref InterPro:IPR003661 3337929 3338573 gene locus_tag Alide2_3202 3337929 3338573 CDS product two component transcriptional regulator, LuxR family transl_table 11 protein_id gb|AEB85543.1||gnl|jgi|Alide2_3202 note KEGG: dac:Daci_1204 two component LuxR family transcriptional regulator~PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal~SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal inference protein motif:PFAM:PF00072 db_xref GO:0000156 db_xref GO:0003700 db_xref GO:0043565 db_xref InterPro:IPR000792 db_xref InterPro:IPR001789 3338598 3339179 gene locus_tag Alide2_3203 3338598 3339179 CDS product protein of unknown function DUF336 transl_table 11 protein_id gb|AEB85544.1||gnl|jgi|Alide2_3203 note PFAM: Domain of unknown function DUF336~KEGG: dac:Daci_1203 hypothetical protein inference protein motif:PFAM:PF03928 db_xref InterPro:IPR005624 3340043 3339183 gene locus_tag Alide2_3204 3340043 3339183 CDS product 4-hydroxybenzoyl-CoA thioesterase transl_table 11 protein_id gb|AEB85545.1||gnl|jgi|Alide2_3204 note KEGG: dia:Dtpsy_1990 thioesterase superfamily protein~TIGRFAM: 4-hydroxybenzoyl-CoA thioesterase~PFAM: Thioesterase superfamily; GCN5-related N-acetyltransferase (GNAT) domain inference protein motif:TFAM:TIGR00051 db_xref GO:0016787 db_xref InterPro:IPR000182 db_xref InterPro:IPR006683 db_xref InterPro:IPR006684 3341036 3340053 gene locus_tag Alide2_3205 3341036 3340053 CDS product alpha/beta hydrolase domain-containing protein transl_table 11 protein_id gb|AEB85546.1||gnl|jgi|Alide2_3205 note KEGG: ajs:Ajs_1713 alpha/beta hydrolase domain-containing protein inference similar to AA sequence:KEGG:Ajs_1713 db_xref InterPro:IPR013094 3341924 3341049 gene locus_tag Alide2_3206 3341924 3341049 CDS product fumarylacetoacetate (FAA) hydrolase transl_table 11 protein_id gb|AEB85547.1||gnl|jgi|Alide2_3206 note PFAM: Fumarylacetoacetase, C-terminal-like~KEGG: ajs:Ajs_1712 hydratase/decarboxylase inference protein motif:PFAM:PF01557 db_xref GO:0003824 db_xref InterPro:IPR002529 3342853 3342020 gene locus_tag Alide2_3207 3342853 3342020 CDS product putative signal transduction protein transl_table 11 protein_id gb|AEB85548.1||gnl|jgi|Alide2_3207 note PFAM: Metal-dependent hydrolase HDOD~KEGG: ajs:Ajs_1708 putative signal transduction protein inference protein motif:PFAM:PF08668 db_xref InterPro:IPR013976 3343619 3342909 gene locus_tag Alide2_3208 3343619 3342909 CDS product transcriptional regulator, IclR family transl_table 11 protein_id gb|AEB85549.1||gnl|jgi|Alide2_3208 note KEGG: cti:pRALTA_0434 putative transcriptional regulator, IclR family~PFAM: Transcription regulator IclR, N-terminal; Transcription regulator IclR, C-terminal~SMART: Transcription regulator IclR, N-terminal inference protein motif:PFAM:PF09339 db_xref GO:0003677 db_xref InterPro:IPR005471 db_xref InterPro:IPR014757 3343768 3344778 gene locus_tag Alide2_3209 3343768 3344778 CDS product amidohydrolase 2 transl_table 11 protein_id gb|AEB85550.1||gnl|jgi|Alide2_3209 note PFAM: Amidohydrolase 2~KEGG: bam:Bamb_4804 amidohydrolase 2 inference protein motif:PFAM:PF04909 db_xref GO:0003824 db_xref InterPro:IPR006992 3344829 3345788 gene locus_tag Alide2_3210 3344829 3345788 CDS product extra-cytoplasmic solute receptor transl_table 11 protein_id gb|AEB85551.1||gnl|jgi|Alide2_3210 note KEGG: rme:Rmet_4146 extra-cytoplasmic solute receptor inference similar to AA sequence:KEGG:Rmet_4146 db_xref InterPro:IPR005064 3345821 3346786 gene locus_tag Alide2_3211 3345821 3346786 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85552.1||gnl|jgi|Alide2_3211 note KEGG: aav:Aave_3937 hypothetical protein inference similar to AA sequence:KEGG:Aave_3937 db_xref InterPro:IPR005064 3346789 3347991 gene locus_tag Alide2_3212 3346789 3347991 CDS product Formyl-CoA transferase EC_number 2.8.3.16 transl_table 11 protein_id gb|AEB85553.1||gnl|jgi|Alide2_3212 note KEGG: reu:Reut_B4958 L-carnitine dehydratase/bile acid-inducible protein F~PFAM: CoA-transferase family III inference protein motif:PRIAM:2.8.3.16 db_xref InterPro:IPR003673 3347988 3348839 gene locus_tag Alide2_3213 3347988 3348839 CDS product Citrate synthase transl_table 11 protein_id gb|AEB85554.1||gnl|jgi|Alide2_3213 note PFAM: Citrate synthase-like~KEGG: rme:Rmet_4144 citrate synthase inference protein motif:PFAM:PF00285 db_xref GO:0003824 db_xref InterPro:IPR002020 3349937 3348930 gene locus_tag Alide2_3214 3349937 3348930 CDS product transcriptional regulator, LacI family transl_table 11 protein_id gb|AEB85555.1||gnl|jgi|Alide2_3214 note KEGG: bbr:BB0548 LacI family regulatory protein~PFAM: HTH transcriptional regulator, LacI; Periplasmic binding protein/LacI transcriptional regulator~SMART: HTH transcriptional regulator, LacI inference protein motif:PFAM:PF00356 db_xref GO:0003700 db_xref InterPro:IPR000843 db_xref InterPro:IPR001761 3350028 3351020 gene locus_tag Alide2_3215 3350028 3351020 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85556.1||gnl|jgi|Alide2_3215 note KEGG: bbr:BB0564 hypothetical protein inference similar to AA sequence:KEGG:BB0564 db_xref InterPro:IPR005064 3351026 3352582 gene locus_tag Alide2_3216 3351026 3352582 CDS product o-succinylbenzoate--CoA ligase EC_number 6.2.1.26 transl_table 11 protein_id gb|AEB85557.1||gnl|jgi|Alide2_3216 note KEGG: bbr:BB0547 putative ligase~PFAM: AMP-dependent synthetase/ligase inference protein motif:PRIAM:6.2.1.26 db_xref InterPro:IPR000873 3352609 3353409 gene locus_tag Alide2_3217 3352609 3353409 CDS product 3-oxoacyl-(acyl-carrier-protein) reductase EC_number 1.1.1.100 transl_table 11 protein_id gb|AEB85558.1||gnl|jgi|Alide2_3217 note KEGG: rpd:RPD_4223 short-chain dehydrogenase/reductase SDR~PFAM: Short-chain dehydrogenase/reductase SDR inference protein motif:PRIAM:1.1.1.100 db_xref InterPro:IPR002198 3353447 3354430 gene locus_tag Alide2_3218 3353447 3354430 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85559.1||gnl|jgi|Alide2_3218 note KEGG: reu:Reut_A0842 hypothetical protein inference similar to AA sequence:KEGG:Reut_A0842 db_xref InterPro:IPR005064 3354427 3355608 gene locus_tag Alide2_3219 3354427 3355608 CDS product acetyl-CoA acetyltransferase transl_table 11 protein_id gb|AEB85560.1||gnl|jgi|Alide2_3219 note KEGG: bbr:BB0546 acetyl-CoA acetyltransferase inference similar to AA sequence:KEGG:BB0546 3355605 3356003 gene locus_tag Alide2_3220 3355605 3356003 CDS product protein of unknown function DUF35 transl_table 11 protein_id gb|AEB85561.1||gnl|jgi|Alide2_3220 note PFAM: Domain of unknown function DUF35, OB-fold, C-terminal~KEGG: bbr:BB0545 hypothetical protein inference protein motif:PFAM:PF01796 db_xref InterPro:IPR002878 3356026 3357000 gene locus_tag Alide2_3221 3356026 3357000 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85562.1||gnl|jgi|Alide2_3221 note KEGG: bbr:BB0544 hypothetical protein inference similar to AA sequence:KEGG:BB0544 db_xref InterPro:IPR005064 db_xref InterPro:IPR006311 3359400 3357016 gene locus_tag Alide2_3222 3359400 3357016 CDS product Tex-like protein transl_table 11 protein_id gb|AEB85563.1||gnl|jgi|Alide2_3222 note KEGG: ajs:Ajs_1707 RNA-binding S1 domain-containing protein~PFAM: Tex-like protein, N-terminal; Ribosomal protein S1, RNA-binding domain~SMART: Resolvase, RNase H-like fold; RNA-binding domain, S1 inference protein motif:PFAM:PF09371 db_xref GO:0003723 db_xref InterPro:IPR003029 db_xref InterPro:IPR006641 db_xref InterPro:IPR018974 db_xref InterPro:IPR022967 3359493 3359897 gene locus_tag Alide2_3223 3359493 3359897 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85564.1||gnl|jgi|Alide2_3223 note KEGG: dia:Dtpsy_1998 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_1998 3359898 3360944 gene locus_tag Alide2_3224 3359898 3360944 CDS product protein of unknown function DUF72 transl_table 11 protein_id gb|AEB85565.1||gnl|jgi|Alide2_3224 note PFAM: Protein of unknown function DUF72~KEGG: dia:Dtpsy_1999 protein of unknown function DUF72 inference protein motif:PFAM:PF01904 db_xref InterPro:IPR002763 3361514 3360993 gene locus_tag Alide2_3225 3361514 3360993 CDS product OmpA/MotB domain protein transl_table 11 protein_id gb|AEB85566.1||gnl|jgi|Alide2_3225 note PFAM: Outer membrane protein, OmpA/MotB, C-terminal~KEGG: dia:Dtpsy_1878 OmpA/MotB domain protein inference protein motif:PFAM:PF00691 db_xref InterPro:IPR006665 3361577 3362170 gene locus_tag Alide2_3226 3361577 3362170 CDS product ChaC family protein transl_table 11 protein_id gb|AEB85567.1||gnl|jgi|Alide2_3226 note PFAM: ChaC-like protein~KEGG: dia:Dtpsy_1879 ChaC family protein inference protein motif:PFAM:PF04752 db_xref InterPro:IPR006840 3362187 3362840 gene locus_tag Alide2_3227 3362187 3362840 CDS product pyridoxamine 5'-phosphate oxidase EC_number 1.4.3.5 transl_table 11 protein_id gb|AEB85568.1||gnl|jgi|Alide2_3227 note TIGRFAM: Pyridoxamine 5'-phosphate oxidase~KEGG: dia:Dtpsy_1881 pyridoxamine 5'-phosphate oxidase~PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal inference protein motif:TFAM:TIGR00558 db_xref GO:0004733 db_xref InterPro:IPR000659 db_xref InterPro:IPR011576 db_xref InterPro:IPR019576 3363779 3362841 gene locus_tag Alide2_3228 3363779 3362841 CDS product Auxin Efflux Carrier transl_table 11 protein_id gb|AEB85569.1||gnl|jgi|Alide2_3228 note PFAM: Auxin efflux carrier~KEGG: dia:Dtpsy_1882 auxin efflux carrier inference protein motif:PFAM:PF03547 db_xref InterPro:IPR004776 3365131 3363911 gene locus_tag Alide2_3229 3365131 3363911 CDS product chromate transporter, chromate ion transporter (CHR) family transl_table 11 protein_id gb|AEB85570.1||gnl|jgi|Alide2_3229 note KEGG: ajs:Ajs_2035 chromate transporter~TIGRFAM: Chromate transporter, long chain~PFAM: Chromate transporter inference protein motif:TFAM:TIGR00937 db_xref InterPro:IPR003370 db_xref InterPro:IPR014047 3366055 3365183 gene locus_tag Alide2_3230 3366055 3365183 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85571.1||gnl|jgi|Alide2_3230 note KEGG: ajs:Ajs_2034 hypothetical protein inference similar to AA sequence:KEGG:Ajs_2034 3368609 3366558 gene locus_tag Alide2_3231 3368609 3366558 CDS product TonB-dependent receptor transl_table 11 protein_id gb|AEB85572.1||gnl|jgi|Alide2_3231 note PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug~KEGG: dia:Dtpsy_1842 TonB-dependent receptor inference protein motif:PFAM:PF00593 db_xref GO:0004872 db_xref GO:0005215 db_xref InterPro:IPR000531 db_xref InterPro:IPR012910 3369738 3369190 gene locus_tag Alide2_3232 3369738 3369190 CDS product peptide methionine sulfoxide reductase EC_number 1.8.4.11 transl_table 11 protein_id gb|AEB85573.1||gnl|jgi|Alide2_3232 note TIGRFAM: Peptide methionine sulphoxide reductase MsrA~KEGG: ajs:Ajs_2030 peptide methionine sulfoxide reductase~PFAM: Peptide methionine sulphoxide reductase MsrA inference protein motif:TFAM:TIGR00401 db_xref GO:0005215 db_xref InterPro:IPR002569 3369887 3370549 gene locus_tag Alide2_3233 3369887 3370549 CDS product transcriptional regulator, TetR family transl_table 11 protein_id gb|AEB85574.1||gnl|jgi|Alide2_3233 note PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal~KEGG: ajs:Ajs_2029 TetR family transcriptional regulator inference protein motif:PFAM:PF00440 db_xref GO:0003700 db_xref InterPro:IPR001647 3370600 3371310 gene locus_tag Alide2_3234 3370600 3371310 CDS product Protein-L-isoaspartate(D-aspartate) O-methyltransferase EC_number 2.1.1.77 transl_table 11 protein_id gb|AEB85575.1||gnl|jgi|Alide2_3234 note KEGG: dia:Dtpsy_1837 protein-L-isoaspartate(D-aspartate) O-methyltransferase~PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase inference protein motif:PRIAM:2.1.1.77 db_xref InterPro:IPR000682 3371329 3371667 gene locus_tag Alide2_3235 3371329 3371667 CDS product Rhodanese-like protein transl_table 11 protein_id gb|AEB85576.1||gnl|jgi|Alide2_3235 note KEGG: dia:Dtpsy_1836 rhodanese domain protein~PFAM: Rhodanese-like~SMART: Rhodanese-like inference protein motif:PFAM:PF00581 db_xref InterPro:IPR001763 3371684 3373030 gene locus_tag Alide2_3236 3371684 3373030 CDS product type I secretion outer membrane protein, TolC family transl_table 11 protein_id gb|AEB85577.1||gnl|jgi|Alide2_3236 note KEGG: dia:Dtpsy_1835 type I secretion outer membrane protein, TolC family~TIGRFAM: Type I secretion outer membrane protein, TolC~PFAM: Outer membrane efflux protein inference protein motif:TFAM:TIGR01844 db_xref InterPro:IPR003423 db_xref InterPro:IPR010130 3375762 3374692 gene locus_tag Alide2_3237 3375762 3374692 CDS product plasmid recombination protein transl_table 11 protein_id gb|AEB85578.1||gnl|jgi|Alide2_3237 note PFAM: Plasmid recombination enzyme~KEGG: bvi:Bcep1808_2267 plasmid recombination enzyme inference protein motif:PFAM:PF01076 db_xref GO:0003677 db_xref InterPro:IPR001668 3377914 3376628 gene locus_tag Alide2_3238 3377914 3376628 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85579.1||gnl|jgi|Alide2_3238 note KEGG: mmb:Mmol_0218 hypothetical protein inference similar to AA sequence:KEGG:Mmol_0218 3378276 3378201 gene locus_tag Alide2_R0041 note tRNA-His1 3378276 3378201 tRNA product tRNA-His 3379261 3378404 gene locus_tag Alide2_3239 3379261 3378404 CDS product protein of unknown function DUF6 transmembrane transl_table 11 protein_id gb|AEB85580.1||gnl|jgi|Alide2_3239 note KEGG: axy:AXYL_03456 hypothetical protein~manually curated~PFAM: Drug/metabolite transporter inference protein motif:PFAM:PF00892 db_xref InterPro:IPR000620 3380005 3379502 gene locus_tag Alide2_3240 3380005 3379502 CDS product flavodoxin/nitric oxide synthase transl_table 11 protein_id gb|AEB85581.1||gnl|jgi|Alide2_3240 note PFAM: Flavodoxin/nitric oxide synthase~KEGG: dia:Dtpsy_2016 NAD(P)H dehydrogenase (quinone) inference protein motif:PFAM:PF00258 db_xref GO:0010181 db_xref GO:0016491 db_xref InterPro:IPR008254 3381939 3380038 gene locus_tag Alide2_3241 3381939 3380038 CDS product acyl-CoA dehydrogenase domain-containing protein transl_table 11 protein_id gb|AEB85582.1||gnl|jgi|Alide2_3241 note PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain~KEGG: dia:Dtpsy_2017 acyl-CoA dehydrogenase domain protein inference protein motif:PFAM:PF00441 db_xref GO:0003995 db_xref InterPro:IPR006090 db_xref InterPro:IPR006091 3383171 3382371 gene locus_tag Alide2_3242 3383171 3382371 CDS product polar amino acid ABC transporter, inner membrane subunit transl_table 11 protein_id gb|AEB85583.1||gnl|jgi|Alide2_3242 note KEGG: ctt:CtCNB1_1867 amino acid ABC transporter, permease protein PEB1~TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family~PFAM: Binding-protein-dependent transport systems inner membrane component inference protein motif:TFAM:TIGR01726 db_xref GO:0005215 db_xref InterPro:IPR000515 db_xref InterPro:IPR010065 3383830 3383168 gene locus_tag Alide2_3243 3383830 3383168 CDS product polar amino acid ABC transporter, inner membrane subunit transl_table 11 protein_id gb|AEB85584.1||gnl|jgi|Alide2_3243 note KEGG: dac:Daci_4388 polar amino acid ABC transporter inner membrane protein~TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family~PFAM: Binding-protein-dependent transport systems inner membrane component inference protein motif:TFAM:TIGR01726 db_xref GO:0005215 db_xref InterPro:IPR000515 db_xref InterPro:IPR010065 3384736 3383834 gene locus_tag Alide2_3244 3384736 3383834 CDS product ABC-type transporter, periplasmic subunit family 3 transl_table 11 protein_id gb|AEB85585.1||gnl|jgi|Alide2_3244 note KEGG: ctt:CtCNB1_1865 glutamate-binding protein precursor~PFAM: Extracellular solute-binding protein, family 3~SMART: Extracellular solute-binding protein, family 3 inference protein motif:PFAM:PF00497 db_xref GO:0005215 db_xref InterPro:IPR001638 3386133 3384964 gene locus_tag Alide2_3245 3386133 3384964 CDS product acetyl-CoA acetyltransferase EC_number 2.3.1.16 transl_table 11 protein_id gb|AEB85586.1||gnl|jgi|Alide2_3245 note TIGRFAM: Thiolase~KEGG: dia:Dtpsy_2019 acetyl-CoA acetyltransferase~PFAM: Thiolase, N-terminal; Thiolase, C-terminal inference protein motif:TFAM:TIGR01930 db_xref GO:0005215 db_xref InterPro:IPR002155 db_xref InterPro:IPR020616 db_xref InterPro:IPR020617 3388267 3386168 gene locus_tag Alide2_3246 3388267 3386168 CDS product 3-hydroxybutyryl-CoA epimerase EC_number 5.1.2.3 transl_table 11 protein_id gb|AEB85587.1||gnl|jgi|Alide2_3246 note KEGG: ajs:Ajs_1684 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase~PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; Crotonase, core inference protein motif:PRIAM:5.1.2.3 db_xref InterPro:IPR001753 db_xref InterPro:IPR006108 db_xref InterPro:IPR006176 3389157 3388462 gene locus_tag Alide2_3247 3389157 3388462 CDS product ABC transporter related protein transl_table 11 protein_id gb|AEB85588.1||gnl|jgi|Alide2_3247 note KEGG: dia:Dtpsy_2021 ABC transporter related~PFAM: ABC transporter-like~SMART: ATPase, AAA+ type, core inference protein motif:PFAM:PF00005 db_xref GO:0005524 db_xref GO:0016887 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 3389945 3389157 gene locus_tag Alide2_3248 3389945 3389157 CDS product Monosaccharide-transporting ATPase EC_number 3.6.3.17 transl_table 11 protein_id gb|AEB85589.1||gnl|jgi|Alide2_3248 note PFAM: ABC transporter-like~KEGG: dia:Dtpsy_2022 ABC transporter related~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.17 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 3391276 3389942 gene locus_tag Alide2_3249 3391276 3389942 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB85590.1||gnl|jgi|Alide2_3249 note PFAM: ABC transporter permease~KEGG: dia:Dtpsy_2023 inner-membrane translocator inference protein motif:PFAM:PF02653 db_xref GO:0005215 db_xref InterPro:IPR001851 3392234 3391281 gene locus_tag Alide2_3250 3392234 3391281 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB85591.1||gnl|jgi|Alide2_3250 note PFAM: ABC transporter permease~KEGG: dia:Dtpsy_2024 inner-membrane translocator inference protein motif:PFAM:PF02653 db_xref GO:0005215 db_xref InterPro:IPR001851 3393543 3392308 gene locus_tag Alide2_3251 3393543 3392308 CDS product Extracellular ligand-binding receptor transl_table 11 protein_id gb|AEB85592.1||gnl|jgi|Alide2_3251 note PFAM: Extracellular ligand-binding receptor~KEGG: dia:Dtpsy_2025 extracellular ligand-binding receptor inference protein motif:PFAM:PF01094 db_xref InterPro:IPR001828 3395321 3393684 gene locus_tag Alide2_3252 3395321 3393684 CDS product Long-chain-fatty-acid--CoA ligase EC_number 6.2.1.3 transl_table 11 protein_id gb|AEB85593.1||gnl|jgi|Alide2_3252 note KEGG: dia:Dtpsy_2026 long-chain-fatty-acid--CoA ligase~PFAM: AMP-dependent synthetase/ligase inference protein motif:PRIAM:6.2.1.3 db_xref InterPro:IPR000873 3395464 3396951 gene locus_tag Alide2_3253 3395464 3396951 CDS product UPF0061 protein ydiU transl_table 11 protein_id gb|AEB85594.1||gnl|jgi|Alide2_3253 note KEGG: ajs:Ajs_1677 hypothetical protein~HAMAP: Uncharacterised protein family UPF0061~PFAM: Uncharacterised protein family UPF0061 inference protein motif:HAMAP:MF_00692 db_xref InterPro:IPR003846 3396948 3397361 gene locus_tag Alide2_3254 3396948 3397361 CDS product methionine-R-sulfoxide reductase EC_number 1.8.4.12 transl_table 11 protein_id gb|AEB85595.1||gnl|jgi|Alide2_3254 note TIGRFAM: Methionine sulphoxide reductase B~KEGG: dia:Dtpsy_2028 methionine-R-sulfoxide reductase~PFAM: Methionine sulphoxide reductase B inference protein motif:TFAM:TIGR00357 db_xref GO:0008113 db_xref InterPro:IPR002579 3397358 3397915 gene locus_tag Alide2_3255 3397358 3397915 CDS product intracellular septation protein A transl_table 11 protein_id gb|AEB85596.1||gnl|jgi|Alide2_3255 note KEGG: ajs:Ajs_1675 intracellular septation protein A~TIGRFAM: Intracellular septation protein A~PFAM: Intracellular septation protein A inference protein motif:TFAM:TIGR00997 db_xref InterPro:IPR006008 3397912 3398190 gene locus_tag Alide2_3256 3397912 3398190 CDS product BolA family protein transl_table 11 protein_id gb|AEB85597.1||gnl|jgi|Alide2_3256 note PFAM: BolA protein~KEGG: dia:Dtpsy_2030 BolA family protein inference protein motif:PFAM:PF01722 db_xref InterPro:IPR002634 3398257 3399042 gene locus_tag Alide2_3257 3398257 3399042 CDS product PpiC-type peptidyl-prolyl cis-trans isomerase transl_table 11 protein_id gb|AEB85598.1||gnl|jgi|Alide2_3257 note PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type~KEGG: dia:Dtpsy_2031 PpiC-type peptidyl-prolyl cis-trans isomerase inference protein motif:PFAM:PF00639 db_xref GO:0016853 db_xref InterPro:IPR000297 3399248 3399559 gene locus_tag Alide2_3258 3399248 3399559 CDS product protein of unknown function DUF1049 transl_table 11 protein_id gb|AEB85599.1||gnl|jgi|Alide2_3258 note PFAM: Protein of unknown function DUF1049~KEGG: dia:Dtpsy_1389 hypothetical protein inference protein motif:PFAM:PF06305 db_xref InterPro:IPR010445 3399549 3400706 gene locus_tag Alide2_3259 3399549 3400706 CDS product tetratricopeptide repeat protein transl_table 11 protein_id gb|AEB85600.1||gnl|jgi|Alide2_3259 note KEGG: ajs:Ajs_2472 tetratricopeptide repeat protein inference similar to AA sequence:KEGG:Ajs_2472 3400706 3401026 gene locus_tag Alide2_3260 3400706 3401026 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85601.1||gnl|jgi|Alide2_3260 note KEGG: ajs:Ajs_2473 hypothetical protein inference similar to AA sequence:KEGG:Ajs_2473 db_xref InterPro:IPR003583 3401115 3404075 gene locus_tag Alide2_3261 3401115 3404075 CDS product NADH dehydrogenase (quinone) EC_number 1.6.99.5 transl_table 11 protein_id gb|AEB85602.1||gnl|jgi|Alide2_3261 note KEGG: dia:Dtpsy_1386 putative monovalent cation/H+ antiporter subunit A~PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; Na+/H+ antiporter MnhB subunit-related protein inference protein motif:PRIAM:1.6.99.5 db_xref InterPro:IPR001750 db_xref InterPro:IPR007182 3404076 3404441 gene locus_tag Alide2_3262 3404076 3404441 CDS product NADH-ubiquinone oxidoreductase chain 4L transl_table 11 protein_id gb|AEB85603.1||gnl|jgi|Alide2_3262 note PFAM: NADH-ubiquinone oxidoreductase chain 4L/K~KEGG: dia:Dtpsy_1385 putative monovalent cation/H+ antiporter subunit C inference protein motif:PFAM:PF00420 db_xref GO:0003677 db_xref InterPro:IPR001133 3404503 3406215 gene locus_tag Alide2_3263 3404503 3406215 CDS product NADH/Ubiquinone/plastoquinone (complex I) transl_table 11 protein_id gb|AEB85604.1||gnl|jgi|Alide2_3263 note PFAM: NADH:ubiquinone/plastoquinone oxidoreductase~KEGG: ajs:Ajs_2476 putative monovalent cation/H+ antiporter subunit D inference protein motif:PFAM:PF00361 db_xref GO:0008137 db_xref InterPro:IPR001750 3406212 3406703 gene locus_tag Alide2_3264 3406212 3406703 CDS product cation antiporter transl_table 11 protein_id gb|AEB85605.1||gnl|jgi|Alide2_3264 note PFAM: cation antiporter~KEGG: dia:Dtpsy_1383 putative monovalent cation/H+ antiporter subunit E inference protein motif:PFAM:PF01899 db_xref GO:0008324 db_xref InterPro:IPR002758 3406700 3406981 gene locus_tag Alide2_3265 3406700 3406981 CDS product multiple resistance and pH regulation protein F transl_table 11 protein_id gb|AEB85606.1||gnl|jgi|Alide2_3265 note PFAM: Multiple resistance and pH regulation protein F~KEGG: dia:Dtpsy_1382 multiple resistance and pH regulation protein F inference protein motif:PFAM:PF04066 db_xref GO:0015075 db_xref InterPro:IPR007208 3406978 3407349 gene locus_tag Alide2_3266 3406978 3407349 CDS product Na+/H+ antiporter subunit transl_table 11 protein_id gb|AEB85607.1||gnl|jgi|Alide2_3266 note PFAM: Na+/H+ antiporter subunit~KEGG: dia:Dtpsy_1381 Na+/H+ antiporter subunit inference protein motif:PFAM:PF03334 db_xref GO:0005451 db_xref InterPro:IPR005133 3407352 3409127 gene locus_tag Alide2_3267 3407352 3409127 CDS product peptidase M14 carboxypeptidase A transl_table 11 protein_id gb|AEB85608.1||gnl|jgi|Alide2_3267 note PFAM: Peptidase M14, carboxypeptidase A~KEGG: dia:Dtpsy_1379 hypothetical protein inference protein motif:PFAM:PF00246 db_xref GO:0004181 db_xref GO:0008270 db_xref InterPro:IPR000834 3409151 3409546 gene locus_tag Alide2_3268 3409151 3409546 CDS product CrcB protein transl_table 11 protein_id gb|AEB85609.1||gnl|jgi|Alide2_3268 note KEGG: dia:Dtpsy_1374 camphor resistance protein CrcB~TIGRFAM: Camphor resistance CrcB protein~PFAM: Camphor resistance CrcB protein inference protein motif:TFAM:TIGR00494 db_xref InterPro:IPR003691 3409676 3410539 gene locus_tag Alide2_3269 3409676 3410539 CDS product Conserved hypothetical protein CHP00730 transl_table 11 protein_id gb|AEB85610.1||gnl|jgi|Alide2_3269 note KEGG: ajs:Ajs_2487 hypothetical protein~TIGRFAM: Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG~PFAM: Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG inference protein motif:TFAM:TIGR00730 db_xref InterPro:IPR005269 3411717 3410554 gene locus_tag Alide2_3270 3411717 3410554 CDS product major facilitator superfamily MFS_1 transl_table 11 protein_id gb|AEB85611.1||gnl|jgi|Alide2_3270 note PFAM: Major facilitator superfamily MFS-1~KEGG: dia:Dtpsy_1372 major facilitator superfamily MFS_1 inference protein motif:PFAM:PF07690 db_xref InterPro:IPR011701 3413312 3411714 gene locus_tag Alide2_3271 3413312 3411714 CDS product RmuC-domain protein transl_table 11 protein_id gb|AEB85612.1||gnl|jgi|Alide2_3271 note PFAM: DNA recombination RmuC~KEGG: azo:azo2787 putative RumC-like protein inference protein motif:PFAM:PF02646 db_xref InterPro:IPR003798 3414366 3413386 gene locus_tag Alide2_3272 3414366 3413386 CDS product Glyoxylate reductase EC_number 1.1.1.26 transl_table 11 protein_id gb|AEB85613.1||gnl|jgi|Alide2_3272 note KEGG: dia:Dtpsy_1370 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding~PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain inference protein motif:PRIAM:1.1.1.26 db_xref InterPro:IPR006139 db_xref InterPro:IPR006140 3415795 3414383 gene locus_tag Alide2_3273 3415795 3414383 CDS product putative transmembrane protein transl_table 11 protein_id gb|AEB85614.1||gnl|jgi|Alide2_3273 note KEGG: ajs:Ajs_2491 putative transmembrane protein inference similar to AA sequence:KEGG:Ajs_2491 3417042 3415843 gene locus_tag Alide2_3274 3417042 3415843 CDS product nicotinate phosphoribosyltransferase transl_table 11 protein_id gb|AEB85615.1||gnl|jgi|Alide2_3274 note KEGG: dia:Dtpsy_1368 nicotinate phosphoribosyltransferase~TIGRFAM: Nicotinate phosphoribosyltransferase~PFAM: Nicotinate phosphoribosyltransferase-like inference protein motif:TFAM:TIGR01514 db_xref GO:0004516 db_xref InterPro:IPR006406 db_xref InterPro:IPR015977 3417665 3417192 gene locus_tag Alide2_3275 3417665 3417192 CDS product thioesterase superfamily protein transl_table 11 protein_id gb|AEB85616.1||gnl|jgi|Alide2_3275 note PFAM: Thioesterase superfamily~KEGG: dia:Dtpsy_1367 thioesterase superfamily protein inference protein motif:PFAM:PF03061 db_xref InterPro:IPR006683 3417923 3418477 gene locus_tag Alide2_3276 3417923 3418477 CDS product phasin family protein transl_table 11 protein_id gb|AEB85617.1||gnl|jgi|Alide2_3276 note KEGG: dia:Dtpsy_1366 phasin family protein~TIGRFAM: Phasin, subfamily 1~PFAM: Phasin inference protein motif:TFAM:TIGR01841 db_xref InterPro:IPR010127 db_xref InterPro:IPR018968 3418761 3419810 gene locus_tag Alide2_3277 3418761 3419810 CDS product extracellular solute-binding protein family 1 transl_table 11 protein_id gb|AEB85618.1||gnl|jgi|Alide2_3277 note PFAM: Bacterial extracellular solute-binding, family 1~KEGG: ajs:Ajs_1607 extracellular solute-binding protein inference protein motif:PFAM:PF01547 db_xref GO:0005215 db_xref InterPro:IPR006059 3419925 3420683 gene locus_tag Alide2_3278 3419925 3420683 CDS product 3-hydroxy-2-methylbutyryl-CoA dehydrogenase EC_number 1.1.1.178 transl_table 11 protein_id gb|AEB85619.1||gnl|jgi|Alide2_3278 note KEGG: dia:Dtpsy_2108 short-chain dehydrogenase/reductase SDR~PFAM: Short-chain dehydrogenase/reductase SDR inference protein motif:PRIAM:1.1.1.178 db_xref InterPro:IPR002198 3420886 3420810 gene locus_tag Alide2_R0042 note tRNA-Asp2 3420886 3420810 tRNA product tRNA-Asp 3421009 3420934 gene locus_tag Alide2_R0043 note tRNA-Glu2 3421009 3420934 tRNA product tRNA-Glu 3421108 3421033 gene locus_tag Alide2_R0044 note tRNA-Ala6 3421108 3421033 tRNA product tRNA-Ala 3422588 3421209 gene locus_tag Alide2_3279 3422588 3421209 CDS product integrase family protein transl_table 11 protein_id gb|AEB85620.1||gnl|jgi|Alide2_3279 note PFAM: Integrase, catalytic core, phage~KEGG: ajs:Ajs_1604 phage integrase family protein inference protein motif:PFAM:PF00589 db_xref GO:0003677 db_xref InterPro:IPR002104 3423464 3422919 gene locus_tag Alide2_3280 3423464 3422919 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85621.1||gnl|jgi|Alide2_3280 note manually curated~KEGG: ajs:Ajs_1603 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1603 3423907 3423461 gene locus_tag Alide2_3281 3423907 3423461 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85622.1||gnl|jgi|Alide2_3281 note manually curated~KEGG: ajs:Ajs_1602 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1602 3424190 3423915 gene locus_tag Alide2_3282 3424190 3423915 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85623.1||gnl|jgi|Alide2_3282 note KEGG: ajs:Ajs_1601 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1601 3425218 3424187 gene locus_tag Alide2_3283 3425218 3424187 CDS product PRTRC system protein D transl_table 11 protein_id gb|AEB85624.1||gnl|jgi|Alide2_3283 note TIGRFAM: ParB-related, ThiF-related cassette, protein D~KEGG: ajs:Ajs_1600 hypothetical protein inference protein motif:TFAM:TIGR03739 db_xref InterPro:IPR022389 3425577 3426215 gene locus_tag Alide2_3284 3425577 3426215 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85625.1||gnl|jgi|Alide2_3284 inference ab initio prediction:Prodigal:1.4 3426474 3427574 gene locus_tag Alide2_3285 3426474 3427574 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85626.1||gnl|jgi|Alide2_3285 note KEGG: ajs:Ajs_1599 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1599 3427932 3427579 gene locus_tag Alide2_3286 3427932 3427579 CDS product histone family protein nucleoid-structuring protein H-NS transl_table 11 protein_id gb|AEB85627.1||gnl|jgi|Alide2_3286 note KEGG: ajs:Ajs_1598 nucleoid protein H-NS~PFAM: Histone-like nucleoid-structuring protein H-NS~SMART: Histone-like nucleoid-structuring protein H-NS inference protein motif:PFAM:PF00816 db_xref GO:0003677 db_xref InterPro:IPR001801 3428247 3428029 gene locus_tag Alide2_3287 3428247 3428029 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85628.1||gnl|jgi|Alide2_3287 inference ab initio prediction:Prodigal:1.4 3429089 3428244 gene locus_tag Alide2_3288 3429089 3428244 CDS product PRTRC system ThiF family protein transl_table 11 protein_id gb|AEB85629.1||gnl|jgi|Alide2_3288 note KEGG: ajs:Ajs_1597 UBA/ThiF-type NAD/FAD binding protein~TIGRFAM: ParB-related, ThiF-related cassette, ThiF~PFAM: UBA/THIF-type NAD/FAD binding fold inference protein motif:TFAM:TIGR03736 db_xref InterPro:IPR000594 db_xref InterPro:IPR022500 3429856 3429143 gene locus_tag Alide2_3289 3429856 3429143 CDS product PRTRC system protein A transl_table 11 protein_id gb|AEB85630.1||gnl|jgi|Alide2_3289 note KEGG: ajs:Ajs_1596 hypothetical protein~TIGRFAM: ParB-related, ThiF-related cassette, protein A~PFAM: Domain of unknown function DUF2016 inference protein motif:TFAM:TIGR03735 db_xref InterPro:IPR018560 db_xref InterPro:IPR022499 3430596 3429856 gene locus_tag Alide2_3290 3430596 3429856 CDS product PRTRC system protein B transl_table 11 protein_id gb|AEB85631.1||gnl|jgi|Alide2_3290 note TIGRFAM: ParB-related, ThiF-related cassette, protein B~KEGG: ajs:Ajs_1595 hypothetical protein inference protein motif:TFAM:TIGR03737 db_xref InterPro:IPR022280 3431668 3430625 gene locus_tag Alide2_3291 3431668 3430625 CDS product PRTRC system protein F transl_table 11 protein_id gb|AEB85632.1||gnl|jgi|Alide2_3291 note TIGRFAM: ParB-related, ThiF-related cassette, protein F~KEGG: ajs:Ajs_1594 hypothetical protein inference protein motif:TFAM:TIGR03742 db_xref InterPro:IPR022283 3432123 3431680 gene locus_tag Alide2_3292 3432123 3431680 CDS product ParB-related,ThiF-related cassette, protein C transl_table 11 protein_id gb|AEB85633.1||gnl|jgi|Alide2_3292 note TIGRFAM: ParB-related, ThiF-related cassette, protein C~KEGG: ajs:Ajs_1593 hypothetical protein inference protein motif:TFAM:TIGR03738 db_xref InterPro:IPR022289 3432702 3432220 gene locus_tag Alide2_3293 3432702 3432220 CDS product PRTRC system protein E transl_table 11 protein_id gb|AEB85634.1||gnl|jgi|Alide2_3293 note TIGRFAM: ParB-related, ThiF-related cassette, protein E~KEGG: ajs:Ajs_1592 hypothetical protein inference protein motif:TFAM:TIGR03741 db_xref InterPro:IPR022273 3434575 3432812 gene locus_tag Alide2_3294 3434575 3432812 CDS product PRTRC system ParB family protein transl_table 11 protein_id gb|AEB85635.1||gnl|jgi|Alide2_3294 note TIGRFAM: ParB-related, ThiF-related cassette, ParB; ParB-like partition protein~PFAM: ParB-like nuclease~KEGG: ajs:Ajs_1591 ParB family protein~SMART: ParB-like nuclease inference protein motif:TFAM:TIGR03734 db_xref GO:0003677 db_xref InterPro:IPR003115 db_xref InterPro:IPR004437 db_xref InterPro:IPR022396 3435160 3434660 gene locus_tag Alide2_3295 3435160 3434660 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85636.1||gnl|jgi|Alide2_3295 note KEGG: ajs:Ajs_1590 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1590 3435384 3435788 gene locus_tag Alide2_3296 3435384 3435788 CDS product histone family protein DNA-binding protein transl_table 11 protein_id gb|AEB85637.1||gnl|jgi|Alide2_3296 note KEGG: dia:Dtpsy_2126 histone family protein DNA-binding protein~PFAM: Histone-like bacterial DNA-binding protein~SMART: Histone-like bacterial DNA-binding protein inference protein motif:PFAM:PF00216 db_xref GO:0003677 db_xref InterPro:IPR000119 3435861 3436181 gene locus_tag Alide2_3297 3435861 3436181 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85638.1||gnl|jgi|Alide2_3297 note KEGG: dia:Dtpsy_2127 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_2127 3437070 3436225 gene locus_tag Alide2_3298 3437070 3436225 CDS product putative EA31 protein transl_table 11 protein_id gb|AEB85639.1||gnl|jgi|Alide2_3298 note KEGG: ajs:Ajs_1585 putative EA31 gene protein, phage lambda inference similar to AA sequence:KEGG:Ajs_1585 3438694 3437072 gene locus_tag Alide2_3299 3438694 3437072 CDS product putative EA59 protein transl_table 11 protein_id gb|AEB85640.1||gnl|jgi|Alide2_3299 note KEGG: ajs:Ajs_1584 putative EA59 gene protein, phage lambda inference similar to AA sequence:KEGG:Ajs_1584 3439669 3438824 gene locus_tag Alide2_3300 3439669 3438824 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85641.1||gnl|jgi|Alide2_3300 note manually curated~KEGG: dia:Dtpsy_2166 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_2166 3440949 3439666 gene locus_tag Alide2_3301 3440949 3439666 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85642.1||gnl|jgi|Alide2_3301 note KEGG: rfr:Rfer_1072 hypothetical protein inference similar to AA sequence:KEGG:Rfer_1072 3441849 3440986 gene locus_tag Alide2_3302 3441849 3440986 CDS product Gp37Gp68 family protein transl_table 11 protein_id gb|AEB85643.1||gnl|jgi|Alide2_3302 note PFAM: Phage Gp37Gp68~KEGG: dia:Dtpsy_2170 Gp37Gp68 family protein inference protein motif:PFAM:PF07505 db_xref InterPro:IPR011101 3442905 3441961 gene locus_tag Alide2_3303 3442905 3441961 CDS product Domain of unknown function DUF1814 transl_table 11 protein_id gb|AEB85644.1||gnl|jgi|Alide2_3303 note PFAM: Protein of unknown function DUF1814~KEGG: dia:Dtpsy_2171 hypothetical protein inference protein motif:PFAM:PF08843 db_xref InterPro:IPR014942 3443509 3442898 gene locus_tag Alide2_3304 3443509 3442898 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85645.1||gnl|jgi|Alide2_3304 note KEGG: vei:Veis_2691 hypothetical protein inference similar to AA sequence:KEGG:Veis_2691 3444024 3444356 gene locus_tag Alide2_3305 3444024 3444356 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85646.1||gnl|jgi|Alide2_3305 note KEGG: dia:Dtpsy_2173 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_2173 3444664 3445338 gene locus_tag Alide2_3306 3444664 3445338 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85647.1||gnl|jgi|Alide2_3306 note KEGG: dia:Dtpsy_2174 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_2174 3446823 3445411 gene locus_tag Alide2_3307 3446823 3445411 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85648.1||gnl|jgi|Alide2_3307 note KEGG: dia:Dtpsy_2175 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_2175 3447749 3446838 gene locus_tag Alide2_3308 3447749 3446838 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85649.1||gnl|jgi|Alide2_3308 note KEGG: dia:Dtpsy_2176 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_2176 3448201 3453243 gene locus_tag Alide2_3309 3448201 3453243 CDS product DEAD-like helicase transl_table 11 protein_id gb|AEB85650.1||gnl|jgi|Alide2_3309 note SMART: DEAD-like helicase, N-terminal~KEGG: ajs:Ajs_1578 helicase domain-containing protein inference protein motif:SMART:SM00487 db_xref InterPro:IPR014001 3453809 3454327 gene locus_tag Alide2_3310 3453809 3454327 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85651.1||gnl|jgi|Alide2_3310 note manually curated~KEGG: ajs:Ajs_1576 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1576 3454528 3454298 gene locus_tag Alide2_3311 3454528 3454298 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85652.1||gnl|jgi|Alide2_3311 note KEGG: ajs:Ajs_1575 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1575 3454655 3455167 gene locus_tag Alide2_3312 3454655 3455167 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85653.1||gnl|jgi|Alide2_3312 note KEGG: ajs:Ajs_1574 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1574 3455486 3455274 gene locus_tag Alide2_3313 3455486 3455274 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85654.1||gnl|jgi|Alide2_3313 note KEGG: ajs:Ajs_1573 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1573 3456028 3456336 gene locus_tag Alide2_3314 3456028 3456336 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85655.1||gnl|jgi|Alide2_3314 note KEGG: ajs:Ajs_1572 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1572 3458857 3456389 gene locus_tag Alide2_3315 3458857 3456389 CDS product putative DNA repair ATPase transl_table 11 protein_id gb|AEB85656.1||gnl|jgi|Alide2_3315 note KEGG: ajs:Ajs_1571 putative DNA repair ATPase inference similar to AA sequence:KEGG:Ajs_1571 3459072 3459473 gene locus_tag Alide2_3316 3459072 3459473 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85657.1||gnl|jgi|Alide2_3316 note KEGG: ajs:Ajs_1570 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1570 3459470 3460435 gene locus_tag Alide2_3317 3459470 3460435 CDS product Domain of unknown function DUF1814 transl_table 11 protein_id gb|AEB85658.1||gnl|jgi|Alide2_3317 note PFAM: Protein of unknown function DUF1814~KEGG: ajs:Ajs_1569 hypothetical protein inference protein motif:PFAM:PF08843 db_xref InterPro:IPR014942 3461766 3460486 gene locus_tag Alide2_3318 3461766 3460486 CDS product metallophosphoesterase transl_table 11 protein_id gb|AEB85659.1||gnl|jgi|Alide2_3318 note PFAM: Metallo-dependent phosphatase~KEGG: ajs:Ajs_1567 metallophosphoesterase inference protein motif:PFAM:PF00149 db_xref GO:0016787 db_xref InterPro:IPR004843 3463061 3461778 gene locus_tag Alide2_3319 3463061 3461778 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85660.1||gnl|jgi|Alide2_3319 note KEGG: ajs:Ajs_1566 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1566 3463353 3464306 gene locus_tag Alide2_3320 3463353 3464306 CDS product integrase family protein transl_table 11 protein_id gb|AEB85661.1||gnl|jgi|Alide2_3320 note PFAM: Integrase, catalytic core, phage~KEGG: ajs:Ajs_1565 phage integrase family protein inference protein motif:PFAM:PF00589 db_xref GO:0003677 db_xref InterPro:IPR002104 3464312 3465556 gene locus_tag Alide2_3321 3464312 3465556 CDS product protein of unknown function DUF1173 transl_table 11 protein_id gb|AEB85662.1||gnl|jgi|Alide2_3321 note PFAM: Protein of unknown function DUF1173~KEGG: ajs:Ajs_1564 hypothetical protein inference protein motif:PFAM:PF06666 db_xref InterPro:IPR009553 3465854 3465615 gene locus_tag Alide2_3322 3465854 3465615 CDS product Prophage CP4-57 regulatory transl_table 11 protein_id gb|AEB85663.1||gnl|jgi|Alide2_3322 note PFAM: Prophage CP4-57 regulatory~KEGG: ajs:Ajs_1562 phage transcriptional regulator, AlpA inference protein motif:PFAM:PF05930 db_xref InterPro:IPR010260 3467067 3466282 gene locus_tag Alide2_3323 3467067 3466282 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85664.1||gnl|jgi|Alide2_3323 note KEGG: ajs:Ajs_1561 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1561 3467558 3468139 gene locus_tag Alide2_3324 3467558 3468139 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85665.1||gnl|jgi|Alide2_3324 note KEGG: ajs:Ajs_1560 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1560 3468173 3468394 gene locus_tag Alide2_3325 3468173 3468394 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85666.1||gnl|jgi|Alide2_3325 note KEGG: ajs:Ajs_1559 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1559 3468391 3468738 gene locus_tag Alide2_3326 3468391 3468738 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85667.1||gnl|jgi|Alide2_3326 note KEGG: ajs:Ajs_1558 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1558 3468805 3470443 gene locus_tag Alide2_3327 pseudo 3470430 3471434 gene locus_tag Alide2_3328 3470430 3471434 CDS product P4 alpha zinc-binding domain protein transl_table 11 protein_id gb|AEB85668.1||gnl|jgi|Alide2_3328 note KEGG: ajs:Ajs_1556 phage P4 alpha zinc-binding domain-containing protein~PFAM: Phage P4 alpha, zinc-binding~SMART: Phage P4 alpha, zinc-binding inference protein motif:PFAM:PF08273 db_xref GO:0003896 db_xref GO:0004386 db_xref GO:0008270 db_xref InterPro:IPR013237 3471719 3472783 gene locus_tag Alide2_3329 3471719 3472783 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85669.1||gnl|jgi|Alide2_3329 note KEGG: ajs:Ajs_1554 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1554 3473434 3472865 gene locus_tag Alide2_3330 3473434 3472865 CDS product Peptidase S24/S26A/S26B, conserved region transl_table 11 protein_id gb|AEB85670.1||gnl|jgi|Alide2_3330 note PFAM: Peptidase S24/S26A/S26B, conserved region~KEGG: ajs:Ajs_1553 putative phage repressor inference protein motif:PFAM:PF00717 db_xref InterPro:IPR019759 3473876 3474190 gene locus_tag Alide2_3331 3473876 3474190 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85671.1||gnl|jgi|Alide2_3331 note KEGG: ajs:Ajs_1552 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1552 3474191 3474853 gene locus_tag Alide2_3332 3474191 3474853 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85672.1||gnl|jgi|Alide2_3332 note KEGG: ajs:Ajs_1551 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1551 3474907 3476700 gene locus_tag Alide2_3333 3474907 3476700 CDS product Relaxase transl_table 11 protein_id gb|AEB85673.1||gnl|jgi|Alide2_3333 note PFAM: Uncharacterised protein family, helicase/relaxase, putative~KEGG: ajs:Ajs_1550 FHA domain-containing protein inference protein motif:PFAM:PF07514 db_xref InterPro:IPR011119 3476702 3478603 gene locus_tag Alide2_3334 3476702 3478603 CDS product conjugative coupling factor TraD, SXT/TOL subfamily transl_table 11 protein_id gb|AEB85674.1||gnl|jgi|Alide2_3334 note TIGRFAM: Conjugative coupling factor TraG/TraD~KEGG: ajs:Ajs_1549 hypothetical protein inference protein motif:TFAM:TIGR03743 db_xref InterPro:IPR022458 3478600 3479223 gene locus_tag Alide2_3335 3478600 3479223 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85675.1||gnl|jgi|Alide2_3335 note KEGG: ajs:Ajs_1548 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1548 3479484 3479239 gene locus_tag Alide2_3336 3479484 3479239 CDS product helix-turn-helix domain protein transl_table 11 protein_id gb|AEB85676.1||gnl|jgi|Alide2_3336 note manually curated~PFAM: Helix-turn-helix type 3~KEGG: ajs:Ajs_1547 helix-turn-helix domain-containing protein~SMART: Helix-turn-helix type 3 inference protein motif:PFAM:PF01381 db_xref GO:0043565 db_xref InterPro:IPR001387 3479664 3479996 gene locus_tag Alide2_3337 3479664 3479996 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85677.1||gnl|jgi|Alide2_3337 note manually curated~KEGG: ajs:Ajs_1546 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1546 3480175 3480672 gene locus_tag Alide2_3338 3480175 3480672 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85678.1||gnl|jgi|Alide2_3338 note KEGG: ajs:Ajs_1545 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1545 3480812 3481339 gene locus_tag Alide2_3339 3480812 3481339 CDS product Lytic transglycosylase catalytic transl_table 11 protein_id gb|AEB85679.1||gnl|jgi|Alide2_3339 note PFAM: Lytic transglycosylase-like, catalytic~KEGG: ajs:Ajs_1544 lytic transglycosylase, catalytic inference protein motif:PFAM:PF01464 db_xref InterPro:IPR008258 3481856 3482218 gene locus_tag Alide2_3340 3481856 3482218 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85680.1||gnl|jgi|Alide2_3340 note KEGG: ajs:Ajs_1542 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1542 3482250 3482549 gene locus_tag Alide2_3341 3482250 3482549 CDS product type IV conjugative transfer system protein TraL transl_table 11 protein_id gb|AEB85681.1||gnl|jgi|Alide2_3341 note KEGG: ajs:Ajs_1541 TraL family protein~TIGRFAM: Type IV conjugative transfer system, protein TraL~PFAM: Type IV conjugative transfer system, protein TraL inference protein motif:TFAM:TIGR02762 db_xref InterPro:IPR009838 3482564 3483130 gene locus_tag Alide2_3342 3482564 3483130 CDS product type IV conjugative transfer system protein TraE transl_table 11 protein_id gb|AEB85682.1||gnl|jgi|Alide2_3342 note TIGRFAM: Pilus assembly TraE~KEGG: ajs:Ajs_1540 plasmid-like conjugative transfer protein TraE inference protein motif:TFAM:TIGR02761 db_xref InterPro:IPR007973 3483117 3484124 gene locus_tag Alide2_3343 3483117 3484124 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85683.1||gnl|jgi|Alide2_3343 note KEGG: ajs:Ajs_1539 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1539 3484121 3485557 gene locus_tag Alide2_3344 3484121 3485557 CDS product TraB pilus assembly family protein transl_table 11 protein_id gb|AEB85684.1||gnl|jgi|Alide2_3344 note KEGG: ajs:Ajs_1538 TraB pilus assembly family protein inference similar to AA sequence:KEGG:Ajs_1538 3485541 3486380 gene locus_tag Alide2_3345 3485541 3486380 CDS product disulfide bond isomerase, DsbC/G transl_table 11 protein_id gb|AEB85685.1||gnl|jgi|Alide2_3345 note PFAM: Disulphide bond isomerase, DsbC/G, N-terminal~KEGG: ajs:Ajs_1537 periplasmic thiol:disulfide interchange protein inference protein motif:PFAM:PF10411 db_xref InterPro:IPR018950 3486377 3487042 gene locus_tag Alide2_3346 3486377 3487042 CDS product type IV conjugative transfer system protein TraV transl_table 11 protein_id gb|AEB85686.1||gnl|jgi|Alide2_3346 note KEGG: ajs:Ajs_1536 hypothetical protein~TIGRFAM: Type IV secretion system, TraV~PFAM: Type IV secretion system, TraV inference protein motif:TFAM:TIGR02747 db_xref InterPro:IPR014118 3487050 3489632 gene locus_tag Alide2_3347 3487050 3489632 CDS product type-IV secretion system protein TraC transl_table 11 protein_id gb|AEB85687.1||gnl|jgi|Alide2_3347 note TIGRFAM: Type-IV secretion system protein TraC~KEGG: ajs:Ajs_1535 hypothetical protein inference protein motif:TFAM:TIGR02746 db_xref InterPro:IPR014117 3489629 3489985 gene locus_tag Alide2_3348 3489629 3489985 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85688.1||gnl|jgi|Alide2_3348 note KEGG: ajs:Ajs_1534 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1534 3489982 3490575 gene locus_tag Alide2_3349 3489982 3490575 CDS product conjugative transfer signal peptidase TraF transl_table 11 protein_id gb|AEB85689.1||gnl|jgi|Alide2_3349 note KEGG: ajs:Ajs_1533 hypothetical protein~TIGRFAM: Peptidase S26C, conjugative transfer signal peptidase TraF~PFAM: Peptidase S26, conserved region inference protein motif:TFAM:TIGR02771 db_xref InterPro:IPR014139 db_xref InterPro:IPR019533 3490586 3490981 gene locus_tag Alide2_3350 3490586 3490981 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85690.1||gnl|jgi|Alide2_3350 note KEGG: ajs:Ajs_1532 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1532 3490978 3491613 gene locus_tag Alide2_3351 3490978 3491613 CDS product type-F conjugative transfer system protein TraW transl_table 11 protein_id gb|AEB85691.1||gnl|jgi|Alide2_3351 note TIGRFAM: Type-F conjugative transfer system protein TraW~KEGG: ajs:Ajs_1531 membrane lipoprotein lipid attachment site inference protein motif:TFAM:TIGR02743 db_xref InterPro:IPR014114 3491610 3492635 gene locus_tag Alide2_3352 3491610 3492635 CDS product TraU family protein transl_table 11 protein_id gb|AEB85692.1||gnl|jgi|Alide2_3352 note PFAM: TraU~KEGG: ajs:Ajs_1530 TraU family protein inference protein motif:PFAM:PF06834 db_xref InterPro:IPR009649 3492622 3493386 gene locus_tag Alide2_3353 3492622 3493386 CDS product type-F conjugative transfer system pilin assembly protein TrbC transl_table 11 protein_id gb|AEB85693.1||gnl|jgi|Alide2_3353 note KEGG: ajs:Ajs_1529 hypothetical protein~TIGRFAM: Type-F conjugative transfer system pilin assembly protein TrbC, subgroup~PFAM: Type-F conjugative transfer system pilin assembly protein TrbC inference protein motif:TFAM:TIGR02742 db_xref InterPro:IPR014113 db_xref InterPro:IPR019106 3493396 3495813 gene locus_tag Alide2_3354 3493396 3495813 CDS product conjugal transfer mating pair stabilization protein TraN transl_table 11 protein_id gb|AEB85694.1||gnl|jgi|Alide2_3354 note KEGG: ajs:Ajs_1528 conjugal transfer mating pair stabilization protein TraN inference similar to AA sequence:KEGG:Ajs_1528 3495810 3496199 gene locus_tag Alide2_3355 3495810 3496199 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85695.1||gnl|jgi|Alide2_3355 note KEGG: ajs:Ajs_1527 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1527 3496210 3497085 gene locus_tag Alide2_3356 3496210 3497085 CDS product TraF-like protein transl_table 11 protein_id gb|AEB85696.1||gnl|jgi|Alide2_3356 note KEGG: ajs:Ajs_1526 hypothetical protein~TIGRFAM: Type IV conjugative transfer system protein TraF~PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant inference protein motif:TFAM:TIGR02740 db_xref InterPro:IPR000866 db_xref InterPro:IPR014111 3497095 3498543 gene locus_tag Alide2_3357 3497095 3498543 CDS product TraH family protein transl_table 11 protein_id gb|AEB85697.1||gnl|jgi|Alide2_3357 note PFAM: Type IV conjugative transfer system protein TraH~KEGG: ajs:Ajs_1525 TraH family protein inference protein motif:PFAM:PF06122 db_xref InterPro:IPR010927 3498565 3501336 gene locus_tag Alide2_3358 3498565 3501336 CDS product TraG domain-containing protein transl_table 11 protein_id gb|AEB85698.1||gnl|jgi|Alide2_3358 note PFAM: TraG-like, N-terminal~KEGG: ajs:Ajs_1524 TraG domain-containing protein inference protein motif:PFAM:PF07916 db_xref InterPro:IPR012931 3501692 3501342 gene locus_tag Alide2_3359 3501692 3501342 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85699.1||gnl|jgi|Alide2_3359 note KEGG: ajs:Ajs_1521 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1521 3502440 3501739 gene locus_tag Alide2_3360 3502440 3501739 CDS product integrase family protein transl_table 11 protein_id gb|AEB85700.1||gnl|jgi|Alide2_3360 note PFAM: Integrase, catalytic core, phage~KEGG: ajs:Ajs_1565 phage integrase family protein inference protein motif:PFAM:PF00589 db_xref GO:0003677 db_xref InterPro:IPR002104 3503034 3502609 gene locus_tag Alide2_3361 3503034 3502609 CDS product transposase IS4 family protein transl_table 11 protein_id gb|AEB85701.1||gnl|jgi|Alide2_3361 note PFAM: Transposase, IS4-like~KEGG: pol:Bpro_4722 IS4 family transposase inference protein motif:PFAM:PF01609 db_xref GO:0003677 db_xref GO:0004803 db_xref InterPro:IPR002559 3503131 3503418 gene locus_tag Alide2_3362 3503131 3503418 CDS product transposase IS3/IS911 family protein transl_table 11 protein_id gb|AEB85702.1||gnl|jgi|Alide2_3362 note PFAM: Transposase IS3/IS911family~KEGG: ajs:Ajs_1490 hypothetical protein inference protein motif:PFAM:PF01527 db_xref GO:0003677 db_xref GO:0004803 db_xref InterPro:IPR002514 3503536 3503805 gene locus_tag Alide2_3363 pseudo 3503948 3504076 gene locus_tag Alide2_3364 pseudo 3504073 3504933 gene locus_tag Alide2_3365 3504073 3504933 CDS product polyphosphate kinase 2 transl_table 11 protein_id gb|AEB85703.1||gnl|jgi|Alide2_3365 note KEGG: ajs:Ajs_1514 hypothetical protein~TIGRFAM: Polyphosphate kinase 2, PA0141~PFAM: Polyphosphate kinase-2-related inference protein motif:TFAM:TIGR03707 db_xref GO:0008976 db_xref InterPro:IPR022486 db_xref InterPro:IPR022488 3504953 3507406 gene locus_tag Alide2_3366 3504953 3507406 CDS product heavy metal translocating P-type ATPase EC_number 3.6.3.4 transl_table 11 protein_id gb|AEB85704.1||gnl|jgi|Alide2_3366 note PFAM: ATPase, P-type, ATPase-associated domain; Haloacid dehalogenase-like hydrolase~manually curated~KEGG: ajs:Ajs_1513 heavy metal translocating P-type ATPase~TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P type, cation/copper-transporter; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter inference protein motif:TFAM:TIGR01525 db_xref GO:0004008 db_xref GO:0005524 db_xref GO:0046873 db_xref InterPro:IPR001757 db_xref InterPro:IPR005834 db_xref InterPro:IPR006403 db_xref InterPro:IPR006416 db_xref InterPro:IPR008250 3507498 3508778 gene locus_tag Alide2_3367 3507498 3508778 CDS product major facilitator superfamily MFS_1 transl_table 11 protein_id gb|AEB85705.1||gnl|jgi|Alide2_3367 note PFAM: Major facilitator superfamily MFS-1~KEGG: ajs:Ajs_1512 major facilitator superfamily transporter inference protein motif:PFAM:PF07690 db_xref InterPro:IPR011701 3508781 3509395 gene locus_tag Alide2_3368 3508781 3509395 CDS product LemA family protein transl_table 11 protein_id gb|AEB85706.1||gnl|jgi|Alide2_3368 note PFAM: LemA~KEGG: ajs:Ajs_1511 LemA family protein inference protein motif:PFAM:PF04011 db_xref InterPro:IPR007156 3509392 3510276 gene locus_tag Alide2_3369 3509392 3510276 CDS product protein of unknown function DUF477 transl_table 11 protein_id gb|AEB85707.1||gnl|jgi|Alide2_3369 note PFAM: Protein of unknown function DUF477~KEGG: ajs:Ajs_1510 hypothetical protein inference protein motif:PFAM:PF04536 db_xref InterPro:IPR007621 3510279 3510776 gene locus_tag Alide2_3370 3510279 3510776 CDS product protein of unknown function DUF477 transl_table 11 protein_id gb|AEB85708.1||gnl|jgi|Alide2_3370 note PFAM: Protein of unknown function DUF477~KEGG: ajs:Ajs_1509 hypothetical protein inference protein motif:PFAM:PF04536 db_xref InterPro:IPR007621 3510802 3512160 gene locus_tag Alide2_3371 3510802 3512160 CDS product beta-lactamase domain protein transl_table 11 protein_id gb|AEB85709.1||gnl|jgi|Alide2_3371 note KEGG: ajs:Ajs_1508 beta-lactamase domain-containing protein~PFAM: Beta-lactamase-like; RNA-metabolising metallo-beta-lactamase~SMART: Beta-lactamase-like inference protein motif:PFAM:PF00753 db_xref GO:0016787 db_xref InterPro:IPR001279 db_xref InterPro:IPR011108 3512157 3513692 gene locus_tag Alide2_3372 3512157 3513692 CDS product thymidine phosphorylase EC_number 2.4.2.4 transl_table 11 protein_id gb|AEB85710.1||gnl|jgi|Alide2_3372 note KEGG: ajs:Ajs_1507 thymidine phosphorylase~PFAM: Pyrimidine nucleoside phosphorylase, C-terminal; Glycosyl transferase, family 3~TIGRFAM: Thymidine phosphorylase, type 2~HAMAP: Thymidine phosphorylase, type 2~SMART: Pyrimidine nucleoside phosphorylase, C-terminal inference protein motif:HAMAP:MF_00703 db_xref InterPro:IPR000312 db_xref InterPro:IPR013102 db_xref InterPro:IPR013466 3513689 3514588 gene locus_tag Alide2_3373 3513689 3514588 CDS product ribose-phosphate pyrophosphokinase EC_number 2.7.6.1 transl_table 11 protein_id gb|AEB85711.1||gnl|jgi|Alide2_3373 note KEGG: ajs:Ajs_1506 phosphoribosylpyrophosphate synthetase~TIGRFAM: Phosphoribosyl pyrophosphokinase inference protein motif:TFAM:TIGR01251 db_xref GO:0000287 db_xref GO:0004749 db_xref InterPro:IPR005946 3514585 3515748 gene locus_tag Alide2_3374 3514585 3515748 CDS product peptidase S1 and S6 chymotrypsin/Hap transl_table 11 protein_id gb|AEB85712.1||gnl|jgi|Alide2_3374 note KEGG: ajs:Ajs_1505 peptidase S1 and S6, chymotrypsin/Hap~PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF~SMART: PDZ/DHR/GLGF inference protein motif:PFAM:PF00089 db_xref GO:0004252 db_xref GO:0005515 db_xref InterPro:IPR001254 db_xref InterPro:IPR001478 3515758 3516216 gene locus_tag Alide2_3375 3515758 3516216 CDS product Carbamate kinase EC_number 2.7.2.2 transl_table 11 protein_id gb|AEB85713.1||gnl|jgi|Alide2_3375 note KEGG: dba:Dbac_2177 carbamate kinase~PFAM: Aspartate/glutamate/uridylate kinase inference protein motif:PRIAM:2.7.2.2 db_xref InterPro:IPR001048 3516331 3516975 gene locus_tag Alide2_3376 3516331 3516975 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85714.1||gnl|jgi|Alide2_3376 note KEGG: ajs:Ajs_1500 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1500 3518774 3517089 gene locus_tag Alide2_3377 3518774 3517089 CDS product mercuric reductase EC_number 1.16.1.1 transl_table 11 protein_id gb|AEB85715.1||gnl|jgi|Alide2_3377 note TIGRFAM: Mercury reductase, MerA~KEGG: mms:mma_1749 putative mercuric reductase~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Heavy metal transport/detoxification protein; Pyridine nucleotide-disulphide oxidoreductase, dimerisation inference protein motif:TFAM:TIGR02053 db_xref GO:0016152 db_xref GO:0016491 db_xref GO:0045340 db_xref GO:0050660 db_xref GO:0050661 db_xref InterPro:IPR004099 db_xref InterPro:IPR006121 db_xref InterPro:IPR013027 db_xref InterPro:IPR021179 3518911 3518813 gene locus_tag Alide2_3378 pseudo 3519210 3518935 gene locus_tag Alide2_3379 3519210 3518935 CDS product mercuric transport protein periplasmic component transl_table 11 protein_id gb|AEB85716.1||gnl|jgi|Alide2_3379 note KEGG: shn:Shewana3_4343 mercuric transport protein periplasmic component~TIGRFAM: Mercuric transport protein periplasmic component~PFAM: Heavy metal transport/detoxification protein inference protein motif:TFAM:TIGR02052 db_xref GO:0015097 db_xref GO:0045340 db_xref InterPro:IPR006121 db_xref InterPro:IPR011795 3519573 3519223 gene locus_tag Alide2_3380 3519573 3519223 CDS product Mercuric transport protein MerT transl_table 11 protein_id gb|AEB85717.1||gnl|jgi|Alide2_3380 note PFAM: Mercuric transport protein MerT~KEGG: net:Neut_2570 putative mercuric transport protein inference protein motif:PFAM:PF02411 db_xref GO:0015097 db_xref InterPro:IPR003457 3519645 3520067 gene locus_tag Alide2_3381 3519645 3520067 CDS product transcriptional regulator, MerR family transl_table 11 protein_id gb|AEB85718.1||gnl|jgi|Alide2_3381 note TIGRFAM: Hg(II)-responsive transcriptional regulator~PFAM: Transcription regulator MerR, DNA binding; HTH transcriptional regulator, MerR~KEGG: net:Neut_2571 putative transcriptional regulator MerR~SMART: HTH transcriptional regulator, MerR inference protein motif:TFAM:TIGR02051 db_xref GO:0003677 db_xref GO:0045340 db_xref InterPro:IPR000551 db_xref InterPro:IPR011794 db_xref InterPro:IPR015358 3520610 3520341 gene locus_tag Alide2_3382 pseudo 3523102 3521840 gene locus_tag Alide2_3383 3523102 3521840 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85719.1||gnl|jgi|Alide2_3383 note KEGG: ajs:Ajs_1486 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1486 3523530 3523838 gene locus_tag Alide2_3384 3523530 3523838 CDS product Flagellar hook-basal body complex protein fliE transl_table 11 protein_id gb|AEB85720.1||gnl|jgi|Alide2_3384 note PFAM: Flagellar hook-basal body complex protein FliE~manually curated~TIGRFAM: Flagellar hook-basal body complex protein FliE~KEGG: ajs:Ajs_1485 flagellar hook-basal body complex subunit FliE~HAMAP: Flagellar hook-basal body complex protein FliE inference protein motif:HAMAP:MF_00724 db_xref InterPro:IPR001624 3524228 3523938 gene locus_tag Alide2_3385 3524228 3523938 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85721.1||gnl|jgi|Alide2_3385 note KEGG: dia:Dtpsy_2181 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_2181 3524602 3524312 gene locus_tag Alide2_3386 pseudo 3527749 3524618 gene locus_tag Alide2_3387 3527749 3524618 CDS product heavy metal efflux pump, CzcA family transl_table 11 protein_id gb|AEB85722.1||gnl|jgi|Alide2_3387 note KEGG: dia:Dtpsy_2183 heavy metal efflux pump, CzcA family~TIGRFAM: Heavy metal efflux pump CzcA~PFAM: Acriflavin resistance protein inference protein motif:TFAM:TIGR00914 db_xref GO:0008324 db_xref InterPro:IPR001036 db_xref InterPro:IPR004763 3528139 3527765 gene locus_tag Alide2_3388 pseudo 3528145 3528396 gene locus_tag Alide2_3389 pseudo 3528438 3528716 gene locus_tag Alide2_3390 3528438 3528716 CDS product transposase IS3/IS911 family protein transl_table 11 protein_id gb|AEB85723.1||gnl|jgi|Alide2_3390 note PFAM: Transposase IS3/IS911family~KEGG: dia:Dtpsy_3180 transposase IS3/IS911 family protein inference protein motif:PFAM:PF01527 db_xref GO:0003677 db_xref GO:0004803 db_xref InterPro:IPR002514 3528764 3529588 gene locus_tag Alide2_3391 3528764 3529588 CDS product Integrase catalytic region transl_table 11 protein_id gb|AEB85724.1||gnl|jgi|Alide2_3391 note PFAM: Integrase, catalytic core~KEGG: dia:Dtpsy_3179 integrase catalytic region inference protein motif:PFAM:PF00665 db_xref GO:0003677 db_xref InterPro:IPR001584 3529763 3530116 gene locus_tag Alide2_3392 3529763 3530116 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85725.1||gnl|jgi|Alide2_3392 note KEGG: dia:Dtpsy_2203 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_2203 3530597 3530418 gene locus_tag Alide2_3393 pseudo 3530753 3531418 gene locus_tag Alide2_3394 3530753 3531418 CDS product Rhodanese-like protein transl_table 11 protein_id gb|AEB85726.1||gnl|jgi|Alide2_3394 note KEGG: dia:Dtpsy_2204 transcriptional regulator, ArsR family~PFAM: Rhodanese-like; HTH transcriptional regulator, ArsR~SMART: HTH transcriptional regulator, ArsR; Rhodanese-like inference protein motif:PFAM:PF00581 db_xref GO:0003700 db_xref InterPro:IPR001763 db_xref InterPro:IPR001845 3531424 3531996 gene locus_tag Alide2_3395 3531424 3531996 CDS product Methyltransferase type 11 transl_table 11 protein_id gb|AEB85727.1||gnl|jgi|Alide2_3395 note PFAM: Methyltransferase type 11~KEGG: dia:Dtpsy_2205 methyltransferase type 11 inference protein motif:PFAM:PF08241 db_xref GO:0008168 db_xref InterPro:IPR013216 3532019 3532375 gene locus_tag Alide2_3396 3532019 3532375 CDS product DsrE family protein transl_table 11 protein_id gb|AEB85728.1||gnl|jgi|Alide2_3396 note PFAM: Sulphur relay, DsrE/F-like protein~KEGG: dia:Dtpsy_2206 DsrE family protein inference protein motif:PFAM:PF02635 db_xref InterPro:IPR003787 3532401 3533060 gene locus_tag Alide2_3397 3532401 3533060 CDS product Methyltransferase type 11 transl_table 11 protein_id gb|AEB85729.1||gnl|jgi|Alide2_3397 note KEGG: dia:Dtpsy_2207 methyltransferase type 11~manually curated~PFAM: Methyltransferase type 11 inference protein motif:PFAM:PF08241 db_xref GO:0008168 db_xref InterPro:IPR013216 3533316 3533128 gene locus_tag Alide2_3398 pseudo 3533957 3535258 gene locus_tag Alide2_3399 3533957 3535258 CDS product outer membrane efflux protein transl_table 11 protein_id gb|AEB85730.1||gnl|jgi|Alide2_3399 note PFAM: Outer membrane efflux protein~KEGG: dia:Dtpsy_2209 outer membrane efflux protein inference protein motif:PFAM:PF02321 db_xref GO:0005215 db_xref InterPro:IPR003423 3535262 3536863 gene locus_tag Alide2_3400 3535262 3536863 CDS product efflux transporter, RND family, MFP subunit transl_table 11 protein_id gb|AEB85731.1||gnl|jgi|Alide2_3400 note KEGG: dia:Dtpsy_2210 efflux transporter, RND family, MFP subunit~TIGRFAM: Secretion protein HlyD~PFAM: Secretion protein HlyD inference protein motif:TFAM:TIGR01730 db_xref GO:0008565 db_xref InterPro:IPR006143 3536874 3537215 gene locus_tag Alide2_3401 3536874 3537215 CDS product nitrogen regulatory protein P-II transl_table 11 protein_id gb|AEB85732.1||gnl|jgi|Alide2_3401 note KEGG: dia:Dtpsy_2211 nitrogen regulatory protein P-II~PFAM: Nitrogen regulatory protein PII~SMART: Nitrogen regulatory protein PII inference protein motif:PFAM:PF00543 db_xref GO:0030234 db_xref InterPro:IPR002187 3537239 3540424 gene locus_tag Alide2_3402 3537239 3540424 CDS product heavy metal efflux pump, CzcA family transl_table 11 protein_id gb|AEB85733.1||gnl|jgi|Alide2_3402 note KEGG: dia:Dtpsy_2212 heavy metal efflux pump, CzcA family~TIGRFAM: Heavy metal efflux pump CzcA~PFAM: Acriflavin resistance protein inference protein motif:TFAM:TIGR00914 db_xref GO:0008324 db_xref InterPro:IPR001036 db_xref InterPro:IPR004763 3540499 3543006 gene locus_tag Alide2_3403 3540499 3543006 CDS product heavy metal translocating P-type ATPase EC_number 3.6.3.3 transl_table 11 protein_id gb|AEB85734.1||gnl|jgi|Alide2_3403 note TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P-type, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter~KEGG: dia:Dtpsy_2214 heavy metal translocating P-type ATPase~PFAM: ATPase, P-type, ATPase-associated domain; Haloacid dehalogenase-like hydrolase inference protein motif:TFAM:TIGR01525 db_xref GO:0005524 db_xref GO:0046872 db_xref GO:0046873 db_xref InterPro:IPR001757 db_xref InterPro:IPR005834 db_xref InterPro:IPR006404 db_xref InterPro:IPR006416 db_xref InterPro:IPR008250 3543128 3543814 gene locus_tag Alide2_3404 3543128 3543814 CDS product two component heavy metal response transcriptional regulator, winged helix family transl_table 11 protein_id gb|AEB85735.1||gnl|jgi|Alide2_3404 note TIGRFAM: Signal transduction response regulator, heavy metal response~PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal~KEGG: dia:Dtpsy_2215 two component heavy metal response transcriptional regulator, winged helix family~SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal inference protein motif:TFAM:TIGR01387 db_xref GO:0000156 db_xref GO:0003677 db_xref InterPro:IPR001789 db_xref InterPro:IPR001867 db_xref InterPro:IPR006291 3543811 3545184 gene locus_tag Alide2_3405 3543811 3545184 CDS product heavy metal sensor signal transduction histidine kinase transl_table 11 protein_id gb|AEB85736.1||gnl|jgi|Alide2_3405 note TIGRFAM: Signal transduction histidine kinase, heavy metal sensor~PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain~KEGG: dia:Dtpsy_2216 heavy metal sensor signal transduction histidine kinase~SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain inference protein motif:TFAM:TIGR01386 db_xref GO:0000155 db_xref GO:0004673 db_xref InterPro:IPR003594 db_xref InterPro:IPR003660 db_xref InterPro:IPR003661 db_xref InterPro:IPR006290 3546424 3545378 gene locus_tag Alide2_3406 3546424 3545378 CDS product protein of unknown function DUF6 transmembrane transl_table 11 protein_id gb|AEB85737.1||gnl|jgi|Alide2_3406 note PFAM: Drug/metabolite transporter~KEGG: dia:Dtpsy_2217 protein of unknown function DUF6 transmembrane inference protein motif:PFAM:PF00892 db_xref InterPro:IPR000620 3546709 3547062 gene locus_tag Alide2_3407 3546709 3547062 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85738.1||gnl|jgi|Alide2_3407 note KEGG: dia:Dtpsy_2218 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_2218 3547513 3547866 gene locus_tag Alide2_3408 3547513 3547866 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85739.1||gnl|jgi|Alide2_3408 note KEGG: dia:Dtpsy_2221 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_2221 3549120 3547993 gene locus_tag Alide2_3409 3549120 3547993 CDS product ISRSO5-transposase protein transl_table 11 protein_id gb|AEB85740.1||gnl|jgi|Alide2_3409 note KEGG: dia:Dtpsy_2222 ISRSO5-transposase protein inference similar to AA sequence:KEGG:Dtpsy_2222 3549262 3549406 gene locus_tag Alide2_3410 pseudo 3549750 3549674 gene locus_tag Alide2_R0045 note tRNA-Asp1 3549750 3549674 tRNA product tRNA-Asp 3549873 3549798 gene locus_tag Alide2_R0046 note tRNA-Glu1 3549873 3549798 tRNA product tRNA-Glu 3549969 3549894 gene locus_tag Alide2_R0047 note tRNA-Ala5 3549969 3549894 tRNA product tRNA-Ala 3551439 3550036 gene locus_tag Alide2_3411 3551439 3550036 CDS product glutamyl-tRNA synthetase EC_number 6.1.1.17 transl_table 11 protein_id gb|AEB85741.1||gnl|jgi|Alide2_3411 note TIGRFAM: Glutamyl-tRNA synthetase, class Ic, bacterial/mitochondrial~KEGG: dia:Dtpsy_2224 glutamyl-tRNA synthetase~PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain inference protein motif:TFAM:TIGR00464 db_xref GO:0000166 db_xref GO:0004818 db_xref GO:0005524 db_xref InterPro:IPR004527 db_xref InterPro:IPR020058 3552650 3551436 gene locus_tag Alide2_3412 3552650 3551436 CDS product O-succinylhomoserine sulfhydrylase EC_number 2.5.1.48 transl_table 11 protein_id gb|AEB85742.1||gnl|jgi|Alide2_3412 note TIGRFAM: O-succinylhomoserine sulfhydrylase~KEGG: dac:Daci_4768 O-succinylhomoserine sulfhydrylase~PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme inference protein motif:TFAM:TIGR01325 db_xref InterPro:IPR000277 db_xref InterPro:IPR006234 3554287 3552779 gene locus_tag Alide2_3413 3554287 3552779 CDS product amidophosphoribosyltransferase EC_number 2.4.2.14 transl_table 11 protein_id gb|AEB85743.1||gnl|jgi|Alide2_3413 note TIGRFAM: Amidophosphoribosyl transferase~KEGG: dia:Dtpsy_2226 amidophosphoribosyltransferase~PFAM: Glutamine amidotransferase, class-II; Phosphoribosyltransferase inference protein motif:TFAM:TIGR01134 db_xref GO:0004044 db_xref InterPro:IPR000583 db_xref InterPro:IPR000836 db_xref InterPro:IPR005854 3554839 3554351 gene locus_tag Alide2_3414 3554839 3554351 CDS product Colicin V production protein transl_table 11 protein_id gb|AEB85744.1||gnl|jgi|Alide2_3414 note PFAM: Colicin V production, CvpA; Protein of unknown function DUF2474~KEGG: dia:Dtpsy_2227 colicin V production protein inference protein motif:PFAM:PF02674 db_xref InterPro:IPR003825 db_xref InterPro:IPR018895 3555701 3554853 gene locus_tag Alide2_3415 3555701 3554853 CDS product Sporulation domain-containing protein transl_table 11 protein_id gb|AEB85745.1||gnl|jgi|Alide2_3415 note PFAM: Sporulation-related domain~KEGG: dia:Dtpsy_2228 sporulation domain protein inference protein motif:PFAM:PF05036 db_xref InterPro:IPR007730 3557063 3555711 gene locus_tag Alide2_3416 3557063 3555711 CDS product FolC bifunctional protein EC_number 6.3.2.12 transl_table 11 protein_id gb|AEB85746.1||gnl|jgi|Alide2_3416 note TIGRFAM: Folylpolyglutamate synthetase~KEGG: ajs:Ajs_2739 FolC bifunctional protein~PFAM: Mur ligase, central; Mur ligase, C-terminal inference protein motif:TFAM:TIGR01499 db_xref GO:0004326 db_xref GO:0005524 db_xref InterPro:IPR001645 db_xref InterPro:IPR004101 db_xref InterPro:IPR013221 3557082 3557468 gene locus_tag Alide2_3417 3557082 3557468 CDS product ArsC family protein transl_table 11 protein_id gb|AEB85747.1||gnl|jgi|Alide2_3417 note KEGG: dia:Dtpsy_2230 arsenate reductase and related~TIGRFAM: Transcriptional regulator Spx/MgsR~PFAM: Arsenate reductase-like inference protein motif:TFAM:TIGR01617 db_xref InterPro:IPR006504 db_xref InterPro:IPR006660 3557589 3558260 gene locus_tag Alide2_3418 3557589 3558260 CDS product 17 kDa surface antigen transl_table 11 protein_id gb|AEB85748.1||gnl|jgi|Alide2_3418 note KEGG: dia:Dtpsy_2231 17 kDa surface antigen inference similar to AA sequence:KEGG:Dtpsy_2231 3558321 3558638 gene locus_tag Alide2_3419 3558321 3558638 CDS product protein of unknown function DUF1255 transl_table 11 protein_id gb|AEB85749.1||gnl|jgi|Alide2_3419 note PFAM: Protein of unknown function DUF1255~KEGG: dia:Dtpsy_2232 protein of unknown function DUF1255 inference protein motif:PFAM:PF06865 db_xref InterPro:IPR009664 3558666 3560009 gene locus_tag Alide2_3420 3558666 3560009 CDS product Argininosuccinate synthase EC_number 6.3.4.5 transl_table 11 protein_id gb|AEB85750.1||gnl|jgi|Alide2_3420 note PFAM: Argininosuccinate synthase~TIGRFAM: Argininosuccinate synthase~HAMAP: Argininosuccinate synthase~KEGG: dia:Dtpsy_2233 argininosuccinate synthase inference protein motif:HAMAP:MF_00581 db_xref InterPro:IPR001518 3562094 3560112 gene locus_tag Alide2_3421 3562094 3560112 CDS product GAF modulated sigma54 specific transcriptional regulator, Fis family transl_table 11 protein_id gb|AEB85751.1||gnl|jgi|Alide2_3421 note KEGG: tmz:Tmz1t_3466 GAF modulated sigma54 specific transcriptional regulator, fis family~PFAM: RNA polymerase sigma factor 54, interaction; GAF; Helix-turn-helix, Fis-type~SMART: ATPase, AAA+ type, core inference protein motif:PFAM:PF00158 db_xref GO:0003700 db_xref GO:0005524 db_xref GO:0008134 db_xref InterPro:IPR002078 db_xref InterPro:IPR002197 db_xref InterPro:IPR003018 db_xref InterPro:IPR003593 3562786 3562280 gene locus_tag Alide2_3422 3562786 3562280 CDS product Acetone carboxylase gamma subunit transl_table 11 protein_id gb|AEB85752.1||gnl|jgi|Alide2_3422 note PFAM: Acetone carboxylase, gamma subunit-related~KEGG: eba:ebA4702 acetone carboxylase gamma subunit inference protein motif:PFAM:PF08882 db_xref InterPro:IPR014979 3565135 3562811 gene locus_tag Alide2_3423 3565135 3562811 CDS product Hydantoinase B/oxoprolinase transl_table 11 protein_id gb|AEB85753.1||gnl|jgi|Alide2_3423 note PFAM: Hydantoinase B/oxoprolinase~KEGG: tmz:Tmz1t_3470 hydantoinase B/oxoprolinase inference protein motif:PFAM:PF02538 db_xref GO:0003824 db_xref InterPro:IPR003692 3567291 3565147 gene locus_tag Alide2_3424 3567291 3565147 CDS product Hydantoinase/oxoprolinase transl_table 11 protein_id gb|AEB85754.1||gnl|jgi|Alide2_3424 note PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase, N-terminal~KEGG: reu:Reut_C6172 acetone carboxylase, beta subunit inference protein motif:PFAM:PF01968 db_xref GO:0016787 db_xref InterPro:IPR002821 db_xref InterPro:IPR008040 3568390 3567671 gene locus_tag Alide2_3425 3568390 3567671 CDS product exsB protein transl_table 11 protein_id gb|AEB85755.1||gnl|jgi|Alide2_3425 note KEGG: dia:Dtpsy_2234 ExsB protein~TIGRFAM: Queuosine synthesis~PFAM: Queuosine synthesis inference protein motif:TFAM:TIGR00364 db_xref InterPro:IPR018317 3569058 3568387 gene locus_tag Alide2_3426 3569058 3568387 CDS product protein of unknown function DUF165 transl_table 11 protein_id gb|AEB85756.1||gnl|jgi|Alide2_3426 note KEGG: dia:Dtpsy_2235 hypothetical protein~TIGRFAM: Protein of unknown function DUF165~PFAM: Protein of unknown function DUF165 inference protein motif:TFAM:TIGR00697 db_xref InterPro:IPR003744 3569222 3569596 gene locus_tag Alide2_3427 3569222 3569596 CDS product SPW repeat protein transl_table 11 protein_id gb|AEB85757.1||gnl|jgi|Alide2_3427 note PFAM: SPW repeat~KEGG: dac:Daci_4779 SPW repeat-containing protein inference protein motif:PFAM:PF03779 db_xref InterPro:IPR005530 3570792 3569704 gene locus_tag Alide2_3428 3570792 3569704 CDS product UDP-N-acetylenolpyruvoylglucosamine reductase EC_number 1.1.1.158 transl_table 11 protein_id gb|AEB85758.1||gnl|jgi|Alide2_3428 note TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase~KEGG: dia:Dtpsy_2239 UDP-N-acetylenolpyruvoylglucosamine reductase~PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal; FAD linked oxidase, N-terminal inference protein motif:TFAM:TIGR00179 db_xref GO:0008762 db_xref InterPro:IPR003170 db_xref InterPro:IPR006094 db_xref InterPro:IPR011601 3570856 3571341 gene locus_tag Alide2_3429 3570856 3571341 CDS product protein of unknown function DUF520 transl_table 11 protein_id gb|AEB85759.1||gnl|jgi|Alide2_3429 note PFAM: Protein of unknown function DUF520~KEGG: ajs:Ajs_2750 putative nucleotide-binding protein inference protein motif:PFAM:PF04461 db_xref InterPro:IPR007551 3571352 3571999 gene locus_tag Alide2_3430 3571352 3571999 CDS product Peptidase A2A transl_table 11 protein_id gb|AEB85760.1||gnl|jgi|Alide2_3430 note PFAM: Peptidase A2A, retrovirus RVP subgroup~KEGG: ajs:Ajs_2751 hypothetical protein inference protein motif:PFAM:PF00077 db_xref InterPro:IPR011969 db_xref InterPro:IPR018061 3572029 3573027 gene locus_tag Alide2_3431 3572029 3573027 CDS product putative metal dependent phosphohydrolase transl_table 11 protein_id gb|AEB85761.1||gnl|jgi|Alide2_3431 note KEGG: dia:Dtpsy_2242 putative metal dependent phosphohydrolase inference similar to AA sequence:KEGG:Dtpsy_2242 3573662 3573030 gene locus_tag Alide2_3432 3573662 3573030 CDS product Glycerol-3-phosphate acyltransferase transl_table 11 protein_id gb|AEB85762.1||gnl|jgi|Alide2_3432 note TIGRFAM: Glycerol-3-phosphate acyltransferase, bacteria~HAMAP: Glycerol-3-phosphate acyltransferase, bacteria~KEGG: dia:Dtpsy_2243 protein of unknown function DUF205~PFAM: Glycerol-3-phosphate acyltransferase, bacteria inference protein motif:HAMAP:MF_01043 db_xref InterPro:IPR003811 3574194 3573694 gene locus_tag Alide2_3433 3574194 3573694 CDS product ybaK/ebsC protein transl_table 11 protein_id gb|AEB85763.1||gnl|jgi|Alide2_3433 note KEGG: ajs:Ajs_2754 YbaK/EbsC protein~TIGRFAM: Prolyl-tRNA editing protein, YbaK/EbsC~PFAM: YbaK/aminoacyl-tRNA synthetase-associated domain inference protein motif:TFAM:TIGR00011 db_xref InterPro:IPR004369 db_xref InterPro:IPR007214 3575319 3574258 gene locus_tag Alide2_3434 3575319 3574258 CDS product NADP-dependent oxidoreductase domain protein transl_table 11 protein_id gb|AEB85764.1||gnl|jgi|Alide2_3434 note PFAM: NADP-dependent oxidoreductase domain~KEGG: ajs:Ajs_2755 aldo/keto reductase inference protein motif:PFAM:PF00248 db_xref InterPro:IPR023210 3576474 3575389 gene locus_tag Alide2_3435 3576474 3575389 CDS product Polyamine-transporting ATPase EC_number 3.6.3.31 transl_table 11 protein_id gb|AEB85765.1||gnl|jgi|Alide2_3435 note PFAM: ABC transporter-like; Transport-associated OB, type 2~KEGG: dac:Daci_4799 ABC transporter-like protein~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.31 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 db_xref InterPro:IPR013611 3578208 3576478 gene locus_tag Alide2_3436 3578208 3576478 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB85766.1||gnl|jgi|Alide2_3436 note PFAM: Binding-protein-dependent transport systems inner membrane component~KEGG: dac:Daci_4800 binding-protein-dependent transport systems inner membrane component inference protein motif:PFAM:PF00528 db_xref GO:0005215 db_xref InterPro:IPR000515 3579600 3578272 gene locus_tag Alide2_3437 3579600 3578272 CDS product extracellular solute-binding protein family 1 transl_table 11 protein_id gb|AEB85767.1||gnl|jgi|Alide2_3437 note PFAM: Bacterial extracellular solute-binding, family 1~KEGG: dac:Daci_4801 extracellular solute-binding protein inference protein motif:PFAM:PF01547 db_xref GO:0005215 db_xref InterPro:IPR006059 3579720 3580652 gene locus_tag Alide2_3438 3579720 3580652 CDS product alpha/beta hydrolase fold protein transl_table 11 protein_id gb|AEB85768.1||gnl|jgi|Alide2_3438 note PFAM: Alpha/beta hydrolase fold-1~KEGG: dia:Dtpsy_2246 alpha/beta hydrolase fold protein inference protein motif:PFAM:PF00561 db_xref InterPro:IPR000073 3580775 3581779 gene locus_tag Alide2_3439 3580775 3581779 CDS product diaminopimelate dehydrogenase EC_number 1.4.1.16 transl_table 11 protein_id gb|AEB85769.1||gnl|jgi|Alide2_3439 note TIGRFAM: Diaminopimelate dehydrogenase~KEGG: ajs:Ajs_2757 diaminopimelate dehydrogenase~PFAM: Dihydrodipicolinate reductase, N-terminal inference protein motif:TFAM:TIGR01921 db_xref InterPro:IPR000846 db_xref InterPro:IPR010190 3581848 3582952 gene locus_tag Alide2_3440 3581848 3581928 CDS 3581930 3582952 product hypothetical protein transl_table 11 protein_id gb|AEB85770.1||gnl|jgi|Alide2_3440 note manually curated~KEGG: bpm:BURPS1710b_3602 hypothetical protein exception ribosomal slippage inference similar to AA sequence:KEGG:BURPS1710b_3602 3582964 3585672 gene locus_tag Alide2_3441 3582964 3585672 CDS product aminopeptidase N transl_table 11 protein_id gb|AEB85771.1||gnl|jgi|Alide2_3441 note KEGG: dia:Dtpsy_2249 aminopeptidase N~TIGRFAM: Peptidase M1, alanyl aminopeptidase~PFAM: Peptidase M1, membrane alanine aminopeptidase, N-terminal inference protein motif:TFAM:TIGR02414 db_xref GO:0008270 db_xref InterPro:IPR012779 db_xref InterPro:IPR014782 3585693 3586700 gene locus_tag Alide2_3442 3585693 3586700 CDS product Fructose-bisphosphatase EC_number 3.1.3.11 transl_table 11 protein_id gb|AEB85772.1||gnl|jgi|Alide2_3442 note KEGG: xtr:100486364 fructose-1,6-bisphosphatase class 1-like~PFAM: Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase inference protein motif:PRIAM:3.1.3.11 db_xref InterPro:IPR000146 3586712 3586787 gene locus_tag Alide2_R0048 note tRNA-Thr3 3586712 3586787 tRNA product tRNA-Thr 3588114 3587149 gene locus_tag Alide2_3443 3588114 3587149 CDS product domain of unknown function DUF1738 transl_table 11 protein_id gb|AEB85773.1||gnl|jgi|Alide2_3443 note KEGG: sew:SeSA_B0128 antirestriction protein~manually curated~PFAM: Domain of unknown function DUF1738 inference protein motif:PFAM:PF08401 db_xref InterPro:IPR013610 3588401 3588126 gene locus_tag Alide2_3444 3588401 3588126 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85774.1||gnl|jgi|Alide2_3444 inference ab initio prediction:Prodigal:1.4 3589061 3588708 gene locus_tag Alide2_3445 3589061 3588708 CDS product helix-turn-helix domain protein transl_table 11 protein_id gb|AEB85775.1||gnl|jgi|Alide2_3445 note KEGG: gca:Galf_1463 helix-turn-helix domain-containing protein~PFAM: Helix-turn-helix type 3~SMART: Helix-turn-helix type 3 inference protein motif:PFAM:PF01381 db_xref GO:0043565 db_xref InterPro:IPR001387 3589380 3589580 gene locus_tag Alide2_3446 3589380 3589580 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85776.1||gnl|jgi|Alide2_3446 inference ab initio prediction:Prodigal:1.4 3591032 3590250 gene locus_tag Alide2_3447 3591032 3590250 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85777.1||gnl|jgi|Alide2_3447 inference ab initio prediction:Prodigal:1.4 3591514 3591858 gene locus_tag Alide2_3448 3591514 3591858 CDS product Terminase small subunit transl_table 11 protein_id gb|AEB85778.1||gnl|jgi|Alide2_3448 note PFAM: Terminase small subunit~KEGG: mch:Mchl_1604 terminase small subunit inference protein motif:PFAM:PF03592 db_xref InterPro:IPR005335 3593536 3592064 gene locus_tag Alide2_3449 3593536 3592064 CDS product Primase 1 transl_table 11 protein_id gb|AEB85779.1||gnl|jgi|Alide2_3449 note SMART: Primase, C-terminal 1~KEGG: aeh:Mlg_0791 ATPase-like protein inference protein motif:SMART:SM00942 db_xref InterPro:IPR014820 3594088 3593537 gene locus_tag Alide2_3450 3594088 3593537 CDS product virulence-associated E transl_table 11 protein_id gb|AEB85780.1||gnl|jgi|Alide2_3450 note KEGG: ava:Ava_3094 virulence-associated E inference similar to AA sequence:KEGG:Ava_3094 3594305 3594075 gene locus_tag Alide2_3451 3594305 3594075 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85781.1||gnl|jgi|Alide2_3451 inference ab initio prediction:Prodigal:1.4 3594531 3594298 gene locus_tag Alide2_3452 3594531 3594298 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85782.1||gnl|jgi|Alide2_3452 note KEGG: glo:Glov_1426 hypothetical protein inference similar to AA sequence:KEGG:Glov_1426 3595349 3594678 gene locus_tag Alide2_3453 3595349 3594678 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85783.1||gnl|jgi|Alide2_3453 inference ab initio prediction:Prodigal:1.4 3596602 3595358 gene locus_tag Alide2_3454 3596602 3595358 CDS product integrase family protein transl_table 11 protein_id gb|AEB85784.1||gnl|jgi|Alide2_3454 note PFAM: Integrase, catalytic core, phage~KEGG: glo:Glov_1428 integrase family protein inference protein motif:PFAM:PF00589 db_xref GO:0003677 db_xref InterPro:IPR002104 3597695 3596919 gene locus_tag Alide2_3455 3597695 3596919 CDS product tRNA/rRNA methyltransferase (SpoU) transl_table 11 protein_id gb|AEB85785.1||gnl|jgi|Alide2_3455 note PFAM: tRNA/rRNA methyltransferase, SpoU~KEGG: dia:Dtpsy_1238 tRNA/rRNA methyltransferase (SpoU) inference protein motif:PFAM:PF00588 db_xref GO:0003723 db_xref GO:0008173 db_xref InterPro:IPR001537 3598312 3597692 gene locus_tag Alide2_3456 3598312 3597692 CDS product Ribonuclease H EC_number 3.1.26.4 transl_table 11 protein_id gb|AEB85786.1||gnl|jgi|Alide2_3456 note KEGG: dia:Dtpsy_1237 ribonuclease HII~PFAM: Ribonuclease HII/HIII inference protein motif:PRIAM:3.1.26.4 db_xref InterPro:IPR001352 3599441 3598287 gene locus_tag Alide2_3457 3599441 3598287 CDS product Lipid-A-disaccharide synthase EC_number 2.4.1.182 transl_table 11 protein_id gb|AEB85787.1||gnl|jgi|Alide2_3457 note KEGG: dia:Dtpsy_1236 lipid-A-disaccharide synthase~manually curated~TIGRFAM: Glycosyl transferase, family 19~PFAM: Glycosyl transferase, family 19~HAMAP: Glycosyl transferase, family 19 inference protein motif:HAMAP:MF_00392 db_xref InterPro:IPR003835 3600241 3599453 gene locus_tag Alide2_3458 3600241 3599453 CDS product Acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase EC_number 2.3.1.129 transl_table 11 protein_id gb|AEB85788.1||gnl|jgi|Alide2_3458 note PFAM: Bacterial transferase hexapeptide repeat~TIGRFAM: Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase~HAMAP: Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase~KEGG: ajs:Ajs_2573 UDP-N-acetylglucosamine acyltransferase inference protein motif:HAMAP:MF_00387 db_xref InterPro:IPR001451 db_xref InterPro:IPR010137 3600707 3600267 gene locus_tag Alide2_3459 3600707 3600267 CDS product beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ transl_table 11 protein_id gb|AEB85789.1||gnl|jgi|Alide2_3459 note KEGG: aav:Aave_1834 (3R)-hydroxymyristoyl-ACP dehydratase~TIGRFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ~PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ inference protein motif:TFAM:TIGR01750 db_xref GO:0016836 db_xref InterPro:IPR010084 db_xref InterPro:IPR013114 3601702 3600704 gene locus_tag Alide2_3460 3601702 3600704 CDS product UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase transl_table 11 protein_id gb|AEB85790.1||gnl|jgi|Alide2_3460 note TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase~HAMAP: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase~KEGG: dia:Dtpsy_1233 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase~PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region; Bacterial transferase hexapeptide repeat inference protein motif:HAMAP:MF_00523 db_xref InterPro:IPR001451 db_xref InterPro:IPR007691 db_xref InterPro:IPR020573 3602255 3601731 gene locus_tag Alide2_3461 3602255 3601731 CDS product outer membrane chaperone Skp (OmpH) transl_table 11 protein_id gb|AEB85791.1||gnl|jgi|Alide2_3461 note KEGG: ajs:Ajs_2576 outer membrane chaperone Skp (OmpH)~PFAM: Outer membrane chaperone Skp (OmpH)~SMART: Outer membrane chaperone Skp (OmpH) inference protein motif:PFAM:PF03938 db_xref GO:0005515 db_xref InterPro:IPR005632 3604552 3602255 gene locus_tag Alide2_3462 3604552 3602255 CDS product outer membrane protein assembly complex, YaeT protein transl_table 11 protein_id gb|AEB85792.1||gnl|jgi|Alide2_3462 note KEGG: dia:Dtpsy_1231 outer membrane protein assembly complex, YaeT protein~TIGRFAM: Outer membrane assembly protein, YaeT~PFAM: Bacterial surface antigen (D15); Surface antigen variable number inference protein motif:TFAM:TIGR03303 db_xref InterPro:IPR000184 db_xref InterPro:IPR010827 db_xref InterPro:IPR016474 3605959 3604598 gene locus_tag Alide2_3463 3605959 3604598 CDS product membrane-associated zinc metalloprotease transl_table 11 protein_id gb|AEB85793.1||gnl|jgi|Alide2_3463 note TIGRFAM: Peptidase M50, putative membrane-associated zinc metallopeptidase~PFAM: Peptidase M50; PDZ/DHR/GLGF~KEGG: ajs:Ajs_2578 peptidase RseP~SMART: PDZ/DHR/GLGF inference protein motif:TFAM:TIGR00054 db_xref GO:0004222 db_xref InterPro:IPR001478 db_xref InterPro:IPR004387 db_xref InterPro:IPR008915 3607237 3606062 gene locus_tag Alide2_3464 3607237 3606062 CDS product 1-deoxy-D-xylulose 5-phosphate reductoisomerase EC_number 1.1.1.267 transl_table 11 protein_id gb|AEB85794.1||gnl|jgi|Alide2_3464 note TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase~KEGG: dia:Dtpsy_1229 1-deoxy-D-xylulose 5-phosphate reductoisomerase~PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal; 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal inference protein motif:TFAM:TIGR00243 db_xref GO:0030604 db_xref GO:0046872 db_xref InterPro:IPR003821 db_xref InterPro:IPR013512 db_xref InterPro:IPR013644 3608086 3607241 gene locus_tag Alide2_3465 3608086 3607241 CDS product phosphatidate cytidylyltransferase transl_table 11 protein_id gb|AEB85795.1||gnl|jgi|Alide2_3465 note PFAM: Phosphatidate cytidylyltransferase~KEGG: dia:Dtpsy_1228 phosphatidate cytidylyltransferase inference protein motif:PFAM:PF01148 db_xref GO:0046872 db_xref InterPro:IPR000374 3608862 3608125 gene locus_tag Alide2_3466 3608862 3608125 CDS product undecaprenyl diphosphate synthase EC_number 2.5.1.31 transl_table 11 protein_id gb|AEB85796.1||gnl|jgi|Alide2_3466 note TIGRFAM: Di-trans-poly-cis-decaprenylcistransferase-like~KEGG: dia:Dtpsy_1227 undecaprenyl diphosphate synthase~PFAM: Di-trans-poly-cis-decaprenylcistransferase-like inference protein motif:TFAM:TIGR00055 db_xref GO:0046872 db_xref InterPro:IPR001441 3609434 3608874 gene locus_tag Alide2_3467 3609434 3608874 CDS product ribosome recycling factor transl_table 11 protein_id gb|AEB85797.1||gnl|jgi|Alide2_3467 note KEGG: dia:Dtpsy_1226 ribosome recycling factor~TIGRFAM: Ribosome recycling factor~PFAM: Ribosome recycling factor inference protein motif:TFAM:TIGR00496 db_xref InterPro:IPR002661 3610206 3609484 gene locus_tag Alide2_3468 3610206 3609484 CDS product uridylate kinase transl_table 11 protein_id gb|AEB85798.1||gnl|jgi|Alide2_3468 note KEGG: dia:Dtpsy_1225 uridylate kinase~TIGRFAM: Uridylate kinase, bacteria~PFAM: Aspartate/glutamate/uridylate kinase inference protein motif:TFAM:TIGR02075 db_xref GO:0033862 db_xref InterPro:IPR001048 db_xref InterPro:IPR015963 3611156 3610260 gene locus_tag Alide2_3469 3611156 3610260 CDS product translation elongation factor Ts transl_table 11 protein_id gb|AEB85799.1||gnl|jgi|Alide2_3469 note KEGG: dia:Dtpsy_1224 elongation factor Ts~TIGRFAM: Translation elongation factor EFTs/EF1B~PFAM: Translation elongation factor EFTs/EF1B, dimerisation; Ubiquitin-associated/translation elongation factor EF1B, N-terminal inference protein motif:TFAM:TIGR00116 db_xref GO:0003746 db_xref InterPro:IPR000449 db_xref InterPro:IPR001816 db_xref InterPro:IPR014039 3612023 3611271 gene locus_tag Alide2_3470 3612023 3611271 CDS product ribosomal protein S2 transl_table 11 protein_id gb|AEB85800.1||gnl|jgi|Alide2_3470 note KEGG: ajs:Ajs_2585 30S ribosomal protein S2~TIGRFAM: Ribosomal protein S2, bacteria/mitochondria/plastid~PFAM: Ribosomal protein S2 inference protein motif:TFAM:TIGR01011 db_xref GO:0003735 db_xref InterPro:IPR001865 db_xref InterPro:IPR005706 3612242 3613588 gene locus_tag Alide2_3471 3612242 3613588 CDS product Amidase transl_table 11 protein_id gb|AEB85801.1||gnl|jgi|Alide2_3471 note PFAM: Amidase~KEGG: ajs:Ajs_2586 amidase inference protein motif:PFAM:PF01425 db_xref GO:0003735 db_xref InterPro:IPR000120 3613643 3614884 gene locus_tag Alide2_3472 3613643 3614884 CDS product D-amino-acid dehydrogenase EC_number 1.4.99.1 transl_table 11 protein_id gb|AEB85802.1||gnl|jgi|Alide2_3472 note KEGG: ajs:Ajs_2587 D-amino-acid dehydrogenase~PFAM: FAD dependent oxidoreductase inference protein motif:PRIAM:1.4.99.1 db_xref InterPro:IPR006076 3614914 3616443 gene locus_tag Alide2_3473 pseudo 3616467 3617300 gene locus_tag Alide2_3474 3616467 3617300 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85803.1||gnl|jgi|Alide2_3474 note KEGG: vap:Vapar_0122 hypothetical protein inference similar to AA sequence:KEGG:Vapar_0122 3617965 3617282 gene locus_tag Alide2_3475 3617965 3617282 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85804.1||gnl|jgi|Alide2_3475 note KEGG: dia:Dtpsy_1218 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_1218 3619112 3618129 gene locus_tag Alide2_3476 3619112 3618129 CDS product mammalian cell entry related domain protein transl_table 11 protein_id gb|AEB85805.1||gnl|jgi|Alide2_3476 note KEGG: dia:Dtpsy_1217 mammalian cell entry related domain protein inference similar to AA sequence:KEGG:Dtpsy_1217 3619970 3619134 gene locus_tag Alide2_3477 3619970 3619134 CDS product protein of unknown function DUF140 transl_table 11 protein_id gb|AEB85806.1||gnl|jgi|Alide2_3477 note PFAM: Domain of unknown function DUF140~KEGG: dia:Dtpsy_1216 protein of unknown function DUF140 inference protein motif:PFAM:PF02405 db_xref InterPro:IPR003453 3620508 3620050 gene locus_tag Alide2_3478 3620508 3620050 CDS product transcriptional regulator, MerR family transl_table 11 protein_id gb|AEB85807.1||gnl|jgi|Alide2_3478 note KEGG: dia:Dtpsy_1215 transcriptional regulator, MerR family~PFAM: Transcription regulator MerR, DNA binding; HTH transcriptional regulator, MerR~SMART: HTH transcriptional regulator, MerR inference protein motif:PFAM:PF09278 db_xref GO:0003700 db_xref InterPro:IPR000551 db_xref InterPro:IPR015358 3620549 3622564 gene locus_tag Alide2_3479 3620549 3622564 CDS product heavy metal translocating P-type ATPase EC_number 3.6.3.3 transl_table 11 protein_id gb|AEB85808.1||gnl|jgi|Alide2_3479 note TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P-type, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter~KEGG: ajs:Ajs_2594 heavy metal translocating P-type ATPase~PFAM: ATPase, P-type, ATPase-associated domain; Haloacid dehalogenase-like hydrolase inference protein motif:TFAM:TIGR01525 db_xref GO:0005524 db_xref GO:0046872 db_xref GO:0046873 db_xref InterPro:IPR001757 db_xref InterPro:IPR005834 db_xref InterPro:IPR006404 db_xref InterPro:IPR006416 db_xref InterPro:IPR008250 3622711 3623337 gene locus_tag Alide2_3480 3622711 3623337 CDS product protein of unknown function DUF161 transl_table 11 protein_id gb|AEB85809.1||gnl|jgi|Alide2_3480 note KEGG: dia:Dtpsy_1212 protein of unknown function DUF161~manually curated~PFAM: Protein of unknown function DUF161 inference protein motif:PFAM:PF02588 db_xref InterPro:IPR003740 3623355 3623702 gene locus_tag Alide2_3481 3623355 3623702 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85810.1||gnl|jgi|Alide2_3481 note KEGG: dia:Dtpsy_1211 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_1211 3623803 3624288 gene locus_tag Alide2_3482 3623803 3624288 CDS product blue (type 1) copper domain protein transl_table 11 protein_id gb|AEB85811.1||gnl|jgi|Alide2_3482 note PFAM: Blue (type 1) copper domain~KEGG: ajs:Ajs_2601 blue (type1) copper domain-containing protein inference protein motif:PFAM:PF00127 db_xref GO:0005507 db_xref GO:0009055 db_xref InterPro:IPR000923 3624315 3624794 gene locus_tag Alide2_3483 3624315 3624794 CDS product protein of unknown function DUF411 transl_table 11 protein_id gb|AEB85812.1||gnl|jgi|Alide2_3483 note PFAM: Protein of unknown function DUF411~KEGG: dia:Dtpsy_1206 protein of unknown function DUF411 inference protein motif:PFAM:PF04214 db_xref InterPro:IPR006311 db_xref InterPro:IPR007332 3624833 3625846 gene locus_tag Alide2_3484 3624833 3625846 CDS product peptidase S58 DmpA transl_table 11 protein_id gb|AEB85813.1||gnl|jgi|Alide2_3484 note PFAM: Peptidase S58, DmpA~KEGG: ajs:Ajs_2605 peptidase S58, DmpA inference protein motif:PFAM:PF03576 db_xref InterPro:IPR005321 3625853 3627184 gene locus_tag Alide2_3485 3625853 3627184 CDS product TRAP transporter solute receptor TAXI family protein transl_table 11 protein_id gb|AEB85814.1||gnl|jgi|Alide2_3485 note KEGG: ajs:Ajs_2606 TRAP transporter solute receptor TAXI family protein inference similar to AA sequence:KEGG:Ajs_2606 3628849 3627188 gene locus_tag Alide2_3486 3628849 3627188 CDS product ATP-binding cassette protein, ChvD family transl_table 11 protein_id gb|AEB85815.1||gnl|jgi|Alide2_3486 note TIGRFAM: ABC transporter ATP-binding protein, ChvD~PFAM: ABC transporter-like~KEGG: dia:Dtpsy_1200 putative ABC transporter ATP-binding protein~SMART: ATPase, AAA+ type, core inference protein motif:TFAM:TIGR03719 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 db_xref InterPro:IPR022374 3629107 3630813 gene locus_tag Alide2_3487 3629107 3630813 CDS product DEAD/DEAH box helicase domain protein transl_table 11 protein_id gb|AEB85816.1||gnl|jgi|Alide2_3487 note KEGG: ajs:Ajs_2609 DEAD/DEAH box helicase domain-containing protein~PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal~SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal inference protein motif:PFAM:PF00270 db_xref GO:0003676 db_xref GO:0004386 db_xref GO:0005524 db_xref GO:0008026 db_xref InterPro:IPR001650 db_xref InterPro:IPR011545 db_xref InterPro:IPR014001 3630914 3632764 gene locus_tag Alide2_3488 3630914 3632764 CDS product peptidase M14 carboxypeptidase A transl_table 11 protein_id gb|AEB85817.1||gnl|jgi|Alide2_3488 note KEGG: ajs:Ajs_2610 peptidase M14, carboxypeptidase A~PFAM: Peptidase M14, carboxypeptidase A~SMART: Peptidase M14, carboxypeptidase A inference protein motif:PFAM:PF00246 db_xref GO:0004181 db_xref GO:0008270 db_xref InterPro:IPR000834 3632868 3632944 gene locus_tag Alide2_R0049 note tRNA-Arg2 3632868 3632944 tRNA product tRNA-Arg 3633028 3633630 gene locus_tag Alide2_3489 3633028 3633630 CDS product PEP motif putative anchor domain protein transl_table 11 protein_id gb|AEB85818.1||gnl|jgi|Alide2_3489 note TIGRFAM: PEP-CTERM anchor~PFAM: PEP-CTERM bacterial inference protein motif:TFAM:TIGR02595 db_xref InterPro:IPR011449 db_xref InterPro:IPR013424 3633786 3634082 gene locus_tag Alide2_3490 3633786 3634082 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85819.1||gnl|jgi|Alide2_3490 note KEGG: ajs:Ajs_2619 hypothetical protein inference similar to AA sequence:KEGG:Ajs_2619 3634213 3634100 gene locus_tag Alide2_3491 3634213 3634100 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85820.1||gnl|jgi|Alide2_3491 inference ab initio prediction:Prodigal:1.4 3634473 3634246 gene locus_tag Alide2_3492 3634473 3634246 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85821.1||gnl|jgi|Alide2_3492 note KEGG: dia:Dtpsy_2403 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_2403 3634682 3635053 gene locus_tag Alide2_3493 pseudo 3635053 3635445 gene locus_tag Alide2_3494 3635053 3635445 CDS product LrgB family protein transl_table 11 protein_id gb|AEB85822.1||gnl|jgi|Alide2_3494 note PFAM: LrgB-like protein~KEGG: dia:Dtpsy_2405 LrgB family protein inference protein motif:PFAM:PF04172 db_xref InterPro:IPR007300 3636390 3635440 gene locus_tag Alide2_3495 3636390 3635440 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB85823.1||gnl|jgi|Alide2_3495 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: ajs:Ajs_2978 LysR family transcriptional regulator inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 3636562 3637758 gene locus_tag Alide2_3496 3636562 3637758 CDS product Glutaryl-CoA dehydrogenase EC_number 1.3.99.7 transl_table 11 protein_id gb|AEB85824.1||gnl|jgi|Alide2_3496 note KEGG: dia:Dtpsy_2407 acyl-CoA dehydrogenase domain protein~PFAM: Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA oxidase/dehydrogenase, type 1 inference protein motif:PRIAM:1.3.99.7 db_xref InterPro:IPR006090 db_xref InterPro:IPR006091 db_xref InterPro:IPR006092 3637818 3639059 gene locus_tag Alide2_3497 3637818 3639059 CDS product Formyl-CoA transferase EC_number 2.8.3.16 transl_table 11 protein_id gb|AEB85825.1||gnl|jgi|Alide2_3497 note KEGG: dia:Dtpsy_2408 L-carnitine dehydratase/bile acid-inducible protein F~PFAM: CoA-transferase family III inference protein motif:PRIAM:2.8.3.16 db_xref InterPro:IPR003673 3639128 3640096 gene locus_tag Alide2_3498 3639128 3640096 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85826.1||gnl|jgi|Alide2_3498 note KEGG: ajs:Ajs_2981 hypothetical protein inference similar to AA sequence:KEGG:Ajs_2981 db_xref InterPro:IPR005064 3640299 3640823 gene locus_tag Alide2_3499 3640299 3640823 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85827.1||gnl|jgi|Alide2_3499 note KEGG: dia:Dtpsy_2411 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_2411 3640858 3641490 gene locus_tag Alide2_3500 3640858 3641490 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85828.1||gnl|jgi|Alide2_3500 note KEGG: dia:Dtpsy_2412 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_2412 3642419 3641478 gene locus_tag Alide2_3501 3642419 3641478 CDS product TrkA-N domain protein transl_table 11 protein_id gb|AEB85829.1||gnl|jgi|Alide2_3501 note PFAM: Regulator of K+ conductance, N-terminal~KEGG: ajs:Ajs_2986 NAD-dependent epimerase/dehydratase inference protein motif:PFAM:PF02254 db_xref InterPro:IPR003148 3642488 3643549 gene locus_tag Alide2_3502 3642488 3643549 CDS product Ferredoxin--NAD(+) reductase EC_number 1.18.1.3 transl_table 11 protein_id gb|AEB85830.1||gnl|jgi|Alide2_3502 note KEGG: dia:Dtpsy_2414 CDP-6-deoxy-delta-3,4-glucoseen reductase~PFAM: Oxidoreductase FAD/NAD(P)-binding; Oxidoreductase, FAD-binding domain; Ferredoxin inference protein motif:PRIAM:1.18.1.3 db_xref InterPro:IPR001041 db_xref InterPro:IPR001433 db_xref InterPro:IPR008333 3644704 3643556 gene locus_tag Alide2_3503 3644704 3643556 CDS product Pyridoxal-5'-phosphate-dependent protein beta subunit transl_table 11 protein_id gb|AEB85831.1||gnl|jgi|Alide2_3503 note PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit~KEGG: hch:HCH_06702 cysteine synthase inference protein motif:PFAM:PF00291 db_xref GO:0003824 db_xref GO:0030170 db_xref InterPro:IPR001926 3644821 3645738 gene locus_tag Alide2_3504 3644821 3645738 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB85832.1||gnl|jgi|Alide2_3504 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: reu:Reut_B5443 regulatory protein, LysR:LysR, substrate-binding inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 3645949 3646959 gene locus_tag Alide2_3505 3645949 3646959 CDS product Uroporphyrinogen decarboxylase (URO-D) transl_table 11 protein_id gb|AEB85833.1||gnl|jgi|Alide2_3505 note PFAM: Uroporphyrinogen decarboxylase (URO-D)~KEGG: reu:Reut_B5441 uroporphyrinogen decarboxylase inference protein motif:PFAM:PF01208 db_xref GO:0004853 db_xref InterPro:IPR000257 3647012 3647995 gene locus_tag Alide2_3506 3647012 3647995 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85834.1||gnl|jgi|Alide2_3506 note KEGG: reu:Reut_B5440 hypothetical protein inference similar to AA sequence:KEGG:Reut_B5440 db_xref InterPro:IPR005064 3648045 3649016 gene locus_tag Alide2_3507 3648045 3649016 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85835.1||gnl|jgi|Alide2_3507 note KEGG: ajs:Ajs_2989 hypothetical protein inference similar to AA sequence:KEGG:Ajs_2989 db_xref InterPro:IPR005064 db_xref InterPro:IPR006311 3649928 3649062 gene locus_tag Alide2_3508 3649928 3649062 CDS product YdjC family protein transl_table 11 protein_id gb|AEB85836.1||gnl|jgi|Alide2_3508 note PFAM: Uncharacterised protein family UPF0249/HpnK~KEGG: vap:Vapar_5574 YdjC family protein inference protein motif:PFAM:PF04794 db_xref InterPro:IPR006879 3649947 3650357 gene locus_tag Alide2_3509 3649947 3650357 CDS product GtrA family protein transl_table 11 protein_id gb|AEB85837.1||gnl|jgi|Alide2_3509 note PFAM: GtrA-like protein~KEGG: axy:AXYL_00714 GtrA-like protein inference protein motif:PFAM:PF04138 db_xref InterPro:IPR007267 3651882 3650305 gene locus_tag Alide2_3510 3651882 3650305 CDS product glycosyl transferase family 39 transl_table 11 protein_id gb|AEB85838.1||gnl|jgi|Alide2_3510 note PFAM: Glycosyl transferase, family 39~KEGG: dac:Daci_2190 glycosyl transferase family protein inference protein motif:PFAM:PF02366 db_xref GO:0000030 db_xref InterPro:IPR003342 3652859 3651879 gene locus_tag Alide2_3511 3652859 3651879 CDS product glycosyl transferase family 2 transl_table 11 protein_id gb|AEB85839.1||gnl|jgi|Alide2_3511 note PFAM: Glycosyl transferase, family 2~KEGG: vap:Vapar_5572 glycosyl transferase family 2 inference protein motif:PFAM:PF00535 db_xref InterPro:IPR001173 3653573 3653055 gene locus_tag Alide2_3512 3653573 3653055 CDS product 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase EC_number 2.7.6.3 transl_table 11 protein_id gb|AEB85840.1||gnl|jgi|Alide2_3512 note TIGRFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK~KEGG: ajs:Ajs_2990 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase~PFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK inference protein motif:TFAM:TIGR01498 db_xref GO:0003848 db_xref InterPro:IPR000550 3655138 3653570 gene locus_tag Alide2_3513 3655138 3653570 CDS product poly(A) polymerase EC_number 2.7.7.19 transl_table 11 protein_id gb|AEB85841.1||gnl|jgi|Alide2_3513 note TIGRFAM: Poly(A) polymerase, PcnB~KEGG: dia:Dtpsy_2418 poly(A) polymerase~PFAM: Poly A polymerase, head domain inference protein motif:TFAM:TIGR01942 db_xref GO:0003723 db_xref GO:0004652 db_xref InterPro:IPR002646 db_xref InterPro:IPR010206 3655809 3655135 gene locus_tag Alide2_3514 3655809 3655135 CDS product HAD-superfamily subfamily IB hydrolase, TIGR01490 transl_table 11 protein_id gb|AEB85842.1||gnl|jgi|Alide2_3514 note TIGRFAM: HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial; HAD-superfamily hydrolase, subfamily IB, PSPase-like~KEGG: dia:Dtpsy_2419 HAD-superfamily subfamily IB hydrolase, TIGR01490 inference protein motif:TFAM:TIGR01490 db_xref GO:0016791 db_xref InterPro:IPR006383 db_xref InterPro:IPR006385 3656513 3655806 gene locus_tag Alide2_3515 3656513 3655806 CDS product DnaA regulatory inactivator Hda transl_table 11 protein_id gb|AEB85843.1||gnl|jgi|Alide2_3515 note KEGG: aav:Aave_1971 chromosomal replication initiator, DnaA~TIGRFAM: Chromosomal replication control, regulator Hda~PFAM: Chromosomal replication control, initiator (DnaA)/regulator (Hda) inference protein motif:TFAM:TIGR03420 db_xref InterPro:IPR013317 db_xref InterPro:IPR017788 3656836 3658788 gene locus_tag Alide2_3516 3656836 3658788 CDS product gamma-glutamyltransferase EC_number 2.3.2.2 transl_table 11 protein_id gb|AEB85844.1||gnl|jgi|Alide2_3516 note TIGRFAM: Gamma-glutamyltranspeptidase~KEGG: aci:ACIAD0929 gamma-glutamyltranspeptidase precursor~PFAM: Gamma-glutamyltranspeptidase inference protein motif:TFAM:TIGR00066 db_xref GO:0003840 db_xref InterPro:IPR000101 3658945 3659985 gene locus_tag Alide2_3517 3658945 3659985 CDS product phosphoribosylformylglycinamidine cyclo-ligase EC_number 6.3.3.1 transl_table 11 protein_id gb|AEB85845.1||gnl|jgi|Alide2_3517 note TIGRFAM: Phosphoribosylformylglycinamidine cyclo-ligase~KEGG: ajs:Ajs_2994 phosphoribosylaminoimidazole synthetase~PFAM: AIR synthase-related protein, C-terminal; AIR synthase-related protein inference protein motif:TFAM:TIGR00878 db_xref GO:0004641 db_xref InterPro:IPR000728 db_xref InterPro:IPR004733 db_xref InterPro:IPR010918 3660010 3661095 gene locus_tag Alide2_3518 3660010 3661095 CDS product protein of unknown function UPF0118 transl_table 11 protein_id gb|AEB85846.1||gnl|jgi|Alide2_3518 note PFAM: Uncharacterised protein family UPF0118~KEGG: dia:Dtpsy_2422 hypothetical protein inference protein motif:PFAM:PF01594 db_xref InterPro:IPR002549 3661327 3661722 gene locus_tag Alide2_3519 3661327 3661722 CDS product UspA domain-containing protein transl_table 11 protein_id gb|AEB85847.1||gnl|jgi|Alide2_3519 note PFAM: UspA~KEGG: dia:Dtpsy_2423 UspA domain protein inference protein motif:PFAM:PF00582 db_xref InterPro:IPR006016 3662572 3661724 gene locus_tag Alide2_3520 3662572 3661724 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85848.1||gnl|jgi|Alide2_3520 note KEGG: ajs:Ajs_2998 hypothetical protein inference similar to AA sequence:KEGG:Ajs_2998 3664154 3662589 gene locus_tag Alide2_3521 3664154 3662589 CDS product integral membrane protein MviN transl_table 11 protein_id gb|AEB85849.1||gnl|jgi|Alide2_3521 note KEGG: ajs:Ajs_2999 integral membrane protein MviN~TIGRFAM: Flagellin assembly, membrane protein MviN~PFAM: Flagellin assembly, membrane protein MviN inference protein motif:TFAM:TIGR01695 db_xref InterPro:IPR004268 3664259 3664558 gene locus_tag Alide2_3522 3664259 3664558 CDS product ribosomal protein S20 transl_table 11 protein_id gb|AEB85850.1||gnl|jgi|Alide2_3522 note KEGG: dia:Dtpsy_2427 30S ribosomal protein S20~TIGRFAM: Ribosomal protein S20~PFAM: Ribosomal protein S20 inference protein motif:TFAM:TIGR00029 db_xref GO:0003723 db_xref GO:0003735 db_xref InterPro:IPR002583 3665453 3664773 gene locus_tag Alide2_3523 3665453 3664773 CDS product protein of unknown function DUF45 transl_table 11 protein_id gb|AEB85851.1||gnl|jgi|Alide2_3523 note KEGG: vha:VIBHAR_05618 hypothetical protein~manually curated~PFAM: Protein of unknown function DUF45 inference protein motif:PFAM:PF01863 db_xref InterPro:IPR002725 3665746 3665474 gene locus_tag Alide2_3524 3665746 3665474 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85852.1||gnl|jgi|Alide2_3524 inference ab initio prediction:Prodigal:1.4 3667270 3665756 gene locus_tag Alide2_3525 3667270 3665756 CDS product transposase IS66 transl_table 11 protein_id gb|AEB85853.1||gnl|jgi|Alide2_3525 note PFAM: Transposase, IS66~KEGG: dia:Dtpsy_2523 transposase IS66 inference protein motif:PFAM:PF03050 db_xref InterPro:IPR004291 3667685 3667353 gene locus_tag Alide2_3526 3667685 3667353 CDS product IS66 Orf2 family protein transl_table 11 protein_id gb|AEB85854.1||gnl|jgi|Alide2_3526 note PFAM: Transposase (putative), IS66 Orf2-like~KEGG: rfr:Rfer_2710 IS66 Orf2 like inference protein motif:PFAM:PF05717 db_xref InterPro:IPR008878 3668110 3667682 gene locus_tag Alide2_3527 3668110 3667682 CDS product transposase IS3/IS911 family protein transl_table 11 protein_id gb|AEB85855.1||gnl|jgi|Alide2_3527 note PFAM: Transposase IS3/IS911family~KEGG: rfr:Rfer_2709 transposase IS3/IS911 inference protein motif:PFAM:PF01527 db_xref GO:0003677 db_xref GO:0004803 db_xref InterPro:IPR002514 3669239 3668325 gene locus_tag Alide2_3528 3669239 3668325 CDS product Integrase catalytic region transl_table 11 protein_id gb|AEB85856.1||gnl|jgi|Alide2_3528 note PFAM: Integrase, catalytic core~KEGG: rpf:Rpic12D_2820 integrase catalytic region inference protein motif:PFAM:PF00665 db_xref GO:0003677 db_xref InterPro:IPR001584 3669559 3669236 gene locus_tag Alide2_3529 3669559 3669236 CDS product transposase IS3/IS911 family protein transl_table 11 protein_id gb|AEB85857.1||gnl|jgi|Alide2_3529 note PFAM: Transposase IS3/IS911family~KEGG: ajs:Ajs_0906 transposase IS3/IS911 family protein inference protein motif:PFAM:PF01527 db_xref GO:0003677 db_xref GO:0004803 db_xref InterPro:IPR002514 3669828 3669631 gene locus_tag Alide2_3530 pseudo 3670997 3669924 gene locus_tag Alide2_3531 3670997 3669924 CDS product putative porin precursor transmembrane protein transl_table 11 protein_id gb|AEB85858.1||gnl|jgi|Alide2_3531 note manually curated~KEGG: pol:Bpro_4383 putative porin precursor transmembrane protein inference similar to AA sequence:KEGG:Bpro_4383 3672837 3672034 gene locus_tag Alide2_3532 3672837 3672034 CDS product IstB domain protein ATP-binding protein transl_table 11 protein_id gb|AEB85859.1||gnl|jgi|Alide2_3532 note KEGG: axy:AXYL_06594 IstB-like ATP binding family protein 3~PFAM: IstB-like ATP-binding protein~SMART: ATPase, AAA+ type, core inference protein motif:PFAM:PF01695 db_xref GO:0005524 db_xref InterPro:IPR002611 db_xref InterPro:IPR003593 3674353 3672827 gene locus_tag Alide2_3533 3674353 3672827 CDS product Integrase catalytic region transl_table 11 protein_id gb|AEB85860.1||gnl|jgi|Alide2_3533 note PFAM: Integrase, catalytic core~KEGG: axy:AXYL_06593 integrase family protein 10 inference protein motif:PFAM:PF00665 db_xref GO:0003677 db_xref InterPro:IPR001584 3674811 3674491 gene locus_tag Alide2_3534 3674811 3674491 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85861.1||gnl|jgi|Alide2_3534 inference ab initio prediction:Prodigal:1.4 3675344 3674802 gene locus_tag Alide2_3535 3675344 3674802 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85862.1||gnl|jgi|Alide2_3535 inference ab initio prediction:Prodigal:1.4 3675807 3675319 gene locus_tag Alide2_3536 3675807 3675319 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85863.1||gnl|jgi|Alide2_3536 inference ab initio prediction:Prodigal:1.4 3676078 3676518 gene locus_tag Alide2_3537 3676078 3676518 CDS product Dimethylmenaquinone methyltransferase transl_table 11 protein_id gb|AEB85864.1||gnl|jgi|Alide2_3537 note PFAM: Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase~KEGG: vap:Vapar_5710 hypothetical protein inference protein motif:PFAM:PF03737 db_xref InterPro:IPR005493 3676876 3676562 gene locus_tag Alide2_3538 3676876 3676562 CDS product Protein of unknown function DUF3579 transl_table 11 protein_id gb|AEB85865.1||gnl|jgi|Alide2_3538 note PFAM: Protein of unknown function DUF3579~KEGG: dia:Dtpsy_2428 hypothetical protein inference protein motif:PFAM:PF12112 db_xref InterPro:IPR021969 3677114 3678310 gene locus_tag Alide2_3539 3677114 3678310 CDS product acetylornithine and succinylornithine aminotransferase EC_number 2.6.1.11 transl_table 11 protein_id gb|AEB85866.1||gnl|jgi|Alide2_3539 note TIGRFAM: Acetylornithine/succinylornithine aminotransferase~KEGG: dia:Dtpsy_2429 acetylornithine aminotransferase~PFAM: Aminotransferase class-III inference protein motif:TFAM:TIGR00707 db_xref GO:0008483 db_xref InterPro:IPR004636 db_xref InterPro:IPR005814 3678327 3679247 gene locus_tag Alide2_3540 3678327 3679247 CDS product Ornithine carbamoyltransferase EC_number 2.1.3.3 transl_table 11 protein_id gb|AEB85867.1||gnl|jgi|Alide2_3540 note PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain~TIGRFAM: Ornithine carbamoyltransferase~HAMAP: Ornithine carbamoyltransferase~KEGG: dia:Dtpsy_2430 ornithine carbamoyltransferase inference protein motif:HAMAP:MF_01109 db_xref InterPro:IPR002292 db_xref InterPro:IPR006131 db_xref InterPro:IPR006132 3679793 3679260 gene locus_tag Alide2_3541 3679793 3679260 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85868.1||gnl|jgi|Alide2_3541 note KEGG: bmj:BMULJ_04805 hypothetical protein inference similar to AA sequence:KEGG:BMULJ_04805 3680009 3679800 gene locus_tag Alide2_3542 3680009 3679800 CDS product Protein of unknown function DUF2945 transl_table 11 protein_id gb|AEB85869.1||gnl|jgi|Alide2_3542 note PFAM: Protein of unknown function DUF2945~KEGG: pde:Pden_4005 hypothetical protein inference protein motif:PFAM:PF11160 db_xref InterPro:IPR021331 3680109 3680456 gene locus_tag Alide2_3543 3680109 3680456 CDS product protein of unknown function UPF0153 transl_table 11 protein_id gb|AEB85870.1||gnl|jgi|Alide2_3543 note PFAM: Uncharacterised protein family UPF0153~KEGG: ajs:Ajs_3004 hypothetical protein inference protein motif:PFAM:PF03692 db_xref InterPro:IPR005358 3680761 3680516 gene locus_tag Alide2_3544 3680761 3680516 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85871.1||gnl|jgi|Alide2_3544 note KEGG: dac:Daci_2177 hypothetical protein inference similar to AA sequence:KEGG:Daci_2177 3682703 3680763 gene locus_tag Alide2_3545 3682703 3680763 CDS product ferrous iron transport protein B transl_table 11 protein_id gb|AEB85872.1||gnl|jgi|Alide2_3545 note KEGG: dia:Dtpsy_2434 ferrous iron transport protein B~TIGRFAM: Ferrous iron transport protein B; Small GTP-binding protein~PFAM: Ferrous iron transport protein B, N-terminal; GTP-binding protein, HSR1-related; Nucleoside recognition; Ferrous iron transport protein B, C-terminal inference protein motif:TFAM:TIGR00437 db_xref GO:0005525 db_xref GO:0015093 db_xref InterPro:IPR002917 db_xref InterPro:IPR003373 db_xref InterPro:IPR005225 db_xref InterPro:IPR011619 db_xref InterPro:IPR011640 db_xref InterPro:IPR011642 3682999 3682700 gene locus_tag Alide2_3546 3682999 3682700 CDS product FeoA family protein transl_table 11 protein_id gb|AEB85873.1||gnl|jgi|Alide2_3546 note KEGG: dia:Dtpsy_2435 FeoA family protein~PFAM: Ferrous iron transporter, FeoA subunit~SMART: Ferrous iron transporter, FeoA subunit inference protein motif:PFAM:PF04023 db_xref GO:0005506 db_xref InterPro:IPR007167 3683119 3683442 gene locus_tag Alide2_3547 3683119 3683442 CDS product protein of unknown function UPF0153 transl_table 11 protein_id gb|AEB85874.1||gnl|jgi|Alide2_3547 note PFAM: Uncharacterised protein family UPF0153~KEGG: dia:Dtpsy_2436 protein of unknown function UPF0153 inference protein motif:PFAM:PF03692 db_xref InterPro:IPR005358 3683444 3684091 gene locus_tag Alide2_3548 3683444 3684091 CDS product arylformamidase EC_number 3.5.1.9 transl_table 11 protein_id gb|AEB85875.1||gnl|jgi|Alide2_3548 note TIGRFAM: Arylformamidase~KEGG: dia:Dtpsy_2438 arylformamidase~PFAM: Putative cyclase inference protein motif:TFAM:TIGR03035 db_xref GO:0004328 db_xref InterPro:IPR007325 db_xref InterPro:IPR017484 3684274 3685272 gene locus_tag Alide2_3549 3684274 3685272 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB85876.1||gnl|jgi|Alide2_3549 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: axy:AXYL_03752 LysR family regulatory helix-turn-helix protein 123 inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 3685269 3686243 gene locus_tag Alide2_3550 3685269 3686243 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB85877.1||gnl|jgi|Alide2_3550 note PFAM: Binding-protein-dependent transport systems inner membrane component~KEGG: bav:BAV1563 ABC transporter, permease protein inference protein motif:PFAM:PF00528 db_xref GO:0005215 db_xref InterPro:IPR000515 3686240 3687139 gene locus_tag Alide2_3551 3686240 3687139 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB85878.1||gnl|jgi|Alide2_3551 note PFAM: Binding-protein-dependent transport systems inner membrane component~KEGG: axy:AXYL_03755 binding-protein-dependent transport system inner membrane component family protein 46 inference protein motif:PFAM:PF00528 db_xref GO:0005215 db_xref InterPro:IPR000515 3687136 3688110 gene locus_tag Alide2_3552 3687136 3688110 CDS product oligopeptide/dipeptide ABC transporter, ATPase subunit EC_number 3.6.3.24 transl_table 11 protein_id gb|AEB85879.1||gnl|jgi|Alide2_3552 note SMART: ATPase, AAA+ type, core~TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal~KEGG: rpf:Rpic12D_1762 oligopeptide/dipeptide ABC transporter, ATPase subunit~PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal inference protein motif:TFAM:TIGR01727 db_xref GO:0005524 db_xref GO:0015197 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 db_xref InterPro:IPR010066 db_xref InterPro:IPR013563 3688107 3689102 gene locus_tag Alide2_3553 3688107 3689102 CDS product oligopeptide/dipeptide ABC transporter, ATPase subunit EC_number 3.6.3.24 transl_table 11 protein_id gb|AEB85880.1||gnl|jgi|Alide2_3553 note SMART: ATPase, AAA+ type, core~TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal~KEGG: axy:AXYL_03757 oligopeptide/dipeptide abc transporter, ATP-binding protein, C-terminal domain-containing protein 6~PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal inference protein motif:TFAM:TIGR01727 db_xref GO:0005524 db_xref GO:0015197 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 db_xref InterPro:IPR010066 db_xref InterPro:IPR013563 3689226 3690794 gene locus_tag Alide2_3554 3689226 3690794 CDS product ABC-type transporter, periplasmic subunit transl_table 11 protein_id gb|AEB85881.1||gnl|jgi|Alide2_3554 note PFAM: Bacterial extracellular solute-binding protein, family 5~KEGG: bav:BAV1559 ABC transporter, substrate binding protein inference protein motif:PFAM:PF00496 db_xref GO:0005215 db_xref InterPro:IPR000914 3690794 3692101 gene locus_tag Alide2_3555 3690794 3692101 CDS product Palmitoyl-CoA hydrolase EC_number 3.1.2.2 transl_table 11 protein_id gb|AEB85882.1||gnl|jgi|Alide2_3555 note KEGG: axy:AXYL_03759 BAAT/acyl-CoA thioester hydrolase family protein 1~PFAM: BAAT/Acyl-CoA thioester hydrolase C-terminal; Acyl-CoA thioester hydrolase/bile acid-CoA amino acid N-acetyltransferase inference protein motif:PRIAM:3.1.2.2 db_xref InterPro:IPR006862 db_xref InterPro:IPR014940 3693159 3692107 gene locus_tag Alide2_3556 3693159 3692107 CDS product Adenosine deaminase EC_number 3.5.4.4 transl_table 11 protein_id gb|AEB85883.1||gnl|jgi|Alide2_3556 note PFAM: Adenosine/AMP deaminase~TIGRFAM: Adenosine deaminase~HAMAP: Adenosine deaminase~KEGG: dia:Dtpsy_2442 adenosine deaminase inference protein motif:HAMAP:MF_00540 db_xref InterPro:IPR001365 db_xref InterPro:IPR006330 3693605 3693252 gene locus_tag Alide2_3557 3693605 3693252 CDS product protein of unknown function DUF861 cupin_3 transl_table 11 protein_id gb|AEB85884.1||gnl|jgi|Alide2_3557 note PFAM: Domain of unknown function DUF861, cupin-3~KEGG: axy:AXYL_05003 hypothetical protein inference protein motif:PFAM:PF05899 db_xref InterPro:IPR008579 3694438 3693644 gene locus_tag Alide2_3558 3694438 3693644 CDS product transcriptional regulator, IclR family transl_table 11 protein_id gb|AEB85885.1||gnl|jgi|Alide2_3558 note KEGG: rso:RSc3411 transcription regulator protein~PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal~SMART: Transcription regulator IclR, N-terminal inference protein motif:PFAM:PF01614 db_xref GO:0003677 db_xref InterPro:IPR005471 db_xref InterPro:IPR014757 3694642 3695412 gene locus_tag Alide2_3559 3694642 3695412 CDS product ABC-type transporter, periplasmic subunit family 3 transl_table 11 protein_id gb|AEB85886.1||gnl|jgi|Alide2_3559 note KEGG: rsl:RPSI07_0031 putative amino acid-binding periplasmic (Pbp) ABC transporter protein~PFAM: Extracellular solute-binding protein, family 3~SMART: Extracellular solute-binding protein, family 3 inference protein motif:PFAM:PF00497 db_xref GO:0005215 db_xref InterPro:IPR001638 3695439 3696104 gene locus_tag Alide2_3560 3695439 3696104 CDS product polar amino acid ABC transporter, inner membrane subunit transl_table 11 protein_id gb|AEB85887.1||gnl|jgi|Alide2_3560 note KEGG: rso:RSc3409 amino-acid transmembrane ABC transporter protein~TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family~PFAM: Binding-protein-dependent transport systems inner membrane component inference protein motif:TFAM:TIGR01726 db_xref GO:0005215 db_xref InterPro:IPR000515 db_xref InterPro:IPR010065 3696101 3696847 gene locus_tag Alide2_3561 3696101 3696847 CDS product Phosphonate-transporting ATPase EC_number 3.6.3.28 transl_table 11 protein_id gb|AEB85888.1||gnl|jgi|Alide2_3561 note PFAM: ABC transporter-like~KEGG: rso:RSc3408 ABC transporter ATP-binding protein~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.28 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 3696844 3698142 gene locus_tag Alide2_3562 3696844 3698142 CDS product FAD dependent oxidoreductase transl_table 11 protein_id gb|AEB85889.1||gnl|jgi|Alide2_3562 note PFAM: FAD dependent oxidoreductase~KEGG: xtr:100491525 hypothetical protein LOC100491525 inference protein motif:PFAM:PF01266 db_xref GO:0016491 db_xref InterPro:IPR006076 3699359 3698193 gene locus_tag Alide2_3563 3699359 3698193 CDS product basic membrane lipoprotein transl_table 11 protein_id gb|AEB85890.1||gnl|jgi|Alide2_3563 note PFAM: Basic membrane lipoprotein~KEGG: dia:Dtpsy_2443 basic membrane lipoprotein inference protein motif:PFAM:PF02608 db_xref GO:0008289 db_xref InterPro:IPR003760 3700545 3699400 gene locus_tag Alide2_3564 3700545 3699400 CDS product basic membrane lipoprotein transl_table 11 protein_id gb|AEB85891.1||gnl|jgi|Alide2_3564 note PFAM: Basic membrane lipoprotein~KEGG: dia:Dtpsy_2444 basic membrane lipoprotein inference protein motif:PFAM:PF02608 db_xref GO:0008289 db_xref InterPro:IPR003760 3701488 3700568 gene locus_tag Alide2_3565 3701488 3700568 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB85892.1||gnl|jgi|Alide2_3565 note PFAM: ABC transporter permease~KEGG: dia:Dtpsy_2445 inner-membrane translocator inference protein motif:PFAM:PF02653 db_xref GO:0005215 db_xref InterPro:IPR001851 3702561 3701488 gene locus_tag Alide2_3566 3702561 3701488 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB85893.1||gnl|jgi|Alide2_3566 note PFAM: ABC transporter permease~KEGG: dia:Dtpsy_2446 inner-membrane translocator inference protein motif:PFAM:PF02653 db_xref GO:0005215 db_xref InterPro:IPR001851 3704137 3702548 gene locus_tag Alide2_3567 3704137 3702548 CDS product Monosaccharide-transporting ATPase EC_number 3.6.3.17 transl_table 11 protein_id gb|AEB85894.1||gnl|jgi|Alide2_3567 note PFAM: ABC transporter-like~KEGG: dia:Dtpsy_2447 ABC transporter related~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.17 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 3707852 3704274 gene locus_tag Alide2_3568 pseudo 3704656 3705786 gene locus_tag Alide2_3569 3704656 3705786 CDS product putative transposase transl_table 11 protein_id gb|AEB85895.1||gnl|jgi|Alide2_3569 note KEGG: pol:Bpro_2745 putative transposase inference similar to AA sequence:KEGG:Bpro_2745 3705752 3706045 gene locus_tag Alide2_3570 3705752 3706045 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85896.1||gnl|jgi|Alide2_3570 note KEGG: pol:Bpro_2744 hypothetical protein inference similar to AA sequence:KEGG:Bpro_2744 3708761 3708138 gene locus_tag Alide2_3571 3708761 3708138 CDS product transcriptional regulator, Crp/Fnr family transl_table 11 protein_id gb|AEB85897.1||gnl|jgi|Alide2_3571 note KEGG: dia:Dtpsy_2451 transcriptional regulator, Crp/Fnr family~PFAM: Cyclic nucleotide-binding domain; HTH transcriptional regulator, Crp~SMART: HTH transcriptional regulator, Crp inference protein motif:PFAM:PF00027 db_xref GO:0003700 db_xref InterPro:IPR000595 db_xref InterPro:IPR001808 3708973 3710031 gene locus_tag Alide2_3572 3708973 3710031 CDS product porin Gram-negative type transl_table 11 protein_id gb|AEB85898.1||gnl|jgi|Alide2_3572 note PFAM: Porin, Gram-negative type~KEGG: dia:Dtpsy_2452 porin gram-negative type inference protein motif:PFAM:PF00267 db_xref GO:0005215 db_xref InterPro:IPR001702 3710141 3710578 gene locus_tag Alide2_3573 3710141 3710578 CDS product histidine triad (HIT) protein transl_table 11 protein_id gb|AEB85899.1||gnl|jgi|Alide2_3573 note PFAM: Histidine triad (HIT) protein~KEGG: dia:Dtpsy_2454 histidine triad (HIT) protein inference protein motif:PFAM:PF01230 db_xref InterPro:IPR001310 3711522 3710575 gene locus_tag Alide2_3574 3711522 3710575 CDS product Glyoxylate reductase EC_number 1.1.1.26 transl_table 11 protein_id gb|AEB85900.1||gnl|jgi|Alide2_3574 note KEGG: dia:Dtpsy_2455 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding~PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain inference protein motif:PRIAM:1.1.1.26 db_xref InterPro:IPR006139 db_xref InterPro:IPR006140 3711704 3712630 gene locus_tag Alide2_3575 3711704 3712630 CDS product major facilitator superfamily MFS_1 transl_table 11 protein_id gb|AEB85901.1||gnl|jgi|Alide2_3575 note PFAM: Major facilitator superfamily MFS-1~KEGG: ajs:Ajs_3110 Bcr/CflA subfamily drug resistance transporter inference protein motif:PFAM:PF07690 db_xref InterPro:IPR011701 3712620 3713582 gene locus_tag Alide2_3576 3712620 3713582 CDS product tRNA dimethylallyltransferase transl_table 11 protein_id gb|AEB85902.1||gnl|jgi|Alide2_3576 note PFAM: tRNA isopentenyltransferase~TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase~KEGG: dia:Dtpsy_2457 tRNA delta(2)-isopentenylpyrophosphate transferase~HAMAP: tRNA delta(2)-isopentenylpyrophosphate transferase inference protein motif:HAMAP:MF_00185 db_xref InterPro:IPR002627 db_xref InterPro:IPR018022 3713588 3714250 gene locus_tag Alide2_3577 3713588 3714250 CDS product Phosphonate-transporting ATPase EC_number 3.6.3.28 transl_table 11 protein_id gb|AEB85903.1||gnl|jgi|Alide2_3577 note PFAM: ABC transporter-like~KEGG: dia:Dtpsy_2458 ABC transporter related~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.28 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 3714686 3714258 gene locus_tag Alide2_3578 3714686 3714258 CDS product heat shock protein Hsp20 transl_table 11 protein_id gb|AEB85904.1||gnl|jgi|Alide2_3578 note PFAM: Heat shock protein Hsp20~KEGG: dia:Dtpsy_2459 heat shock protein HSP20 inference protein motif:PFAM:PF00011 db_xref InterPro:IPR002068 3714819 3717458 gene locus_tag Alide2_3579 3714819 3717458 CDS product protein of unknown function DUF214 transl_table 11 protein_id gb|AEB85905.1||gnl|jgi|Alide2_3579 note PFAM: Domain of unknown function DUF214, ABC transporter permease~KEGG: dia:Dtpsy_2460 protein of unknown function DUF214 inference protein motif:PFAM:PF02687 db_xref InterPro:IPR003838 3717477 3718547 gene locus_tag Alide2_3580 3717477 3718547 CDS product Cysteine synthase EC_number 2.5.1.47 transl_table 11 protein_id gb|AEB85906.1||gnl|jgi|Alide2_3580 note KEGG: ajs:Ajs_3115 pyridoxal-5'-phosphate-dependent enzyme, beta subunit~PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit inference protein motif:PRIAM:2.5.1.47 db_xref InterPro:IPR001926 3718544 3719638 gene locus_tag Alide2_3581 3718544 3719638 CDS product secreted hydrolase-like protein transl_table 11 protein_id gb|AEB85907.1||gnl|jgi|Alide2_3581 note KEGG: ajs:Ajs_3116 secreted hydrolase-like protein inference similar to AA sequence:KEGG:Ajs_3116 3720697 3719696 gene locus_tag Alide2_3582 3720697 3719696 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB85908.1||gnl|jgi|Alide2_3582 note PFAM: ABC transporter permease~KEGG: dia:Dtpsy_2463 inner-membrane translocator inference protein motif:PFAM:PF02653 db_xref GO:0005215 db_xref InterPro:IPR001851 3721600 3720716 gene locus_tag Alide2_3583 3721600 3720716 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB85909.1||gnl|jgi|Alide2_3583 note KEGG: dia:Dtpsy_2464 inner-membrane translocator~manually curated~PFAM: ABC transporter permease inference protein motif:PFAM:PF02653 db_xref GO:0005215 db_xref InterPro:IPR001851 3722846 3721647 gene locus_tag Alide2_3584 3722846 3721647 CDS product Extracellular ligand-binding receptor transl_table 11 protein_id gb|AEB85910.1||gnl|jgi|Alide2_3584 note PFAM: Extracellular ligand-binding receptor~KEGG: ajs:Ajs_3119 extracellular ligand-binding receptor inference protein motif:PFAM:PF01094 db_xref InterPro:IPR001828 3724120 3722918 gene locus_tag Alide2_3585 3724120 3722918 CDS product Extracellular ligand-binding receptor transl_table 11 protein_id gb|AEB85911.1||gnl|jgi|Alide2_3585 note PFAM: Extracellular ligand-binding receptor~KEGG: dia:Dtpsy_2466 extracellular ligand-binding receptor inference protein motif:PFAM:PF01094 db_xref InterPro:IPR001828 3724880 3724170 gene locus_tag Alide2_3586 3724880 3724170 CDS product ABC transporter related protein transl_table 11 protein_id gb|AEB85912.1||gnl|jgi|Alide2_3586 note KEGG: ajs:Ajs_3121 ABC transporter related~PFAM: ABC transporter-like~SMART: ATPase, AAA+ type, core inference protein motif:PFAM:PF00005 db_xref GO:0005524 db_xref GO:0016887 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 3725652 3724882 gene locus_tag Alide2_3587 3725652 3724882 CDS product Monosaccharide-transporting ATPase EC_number 3.6.3.17 transl_table 11 protein_id gb|AEB85913.1||gnl|jgi|Alide2_3587 note PFAM: ABC transporter-like~KEGG: dia:Dtpsy_2468 ABC transporter related~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.17 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 3726597 3725815 gene locus_tag Alide2_3588 3726597 3725815 CDS product putative transcriptional regulator, ModE family transl_table 11 protein_id gb|AEB85914.1||gnl|jgi|Alide2_3588 note PFAM: Transport-associated OB, type 1; HTH transcriptional regulator, LysR~KEGG: dia:Dtpsy_2469 putative transcriptional regulator, ModE family inference protein motif:PFAM:PF03459 db_xref GO:0003700 db_xref GO:0005215 db_xref GO:0005524 db_xref InterPro:IPR000847 db_xref InterPro:IPR005116 3726664 3727428 gene locus_tag Alide2_3589 3726664 3727428 CDS product molybdenum ABC transporter, periplasmic molybdate-binding protein transl_table 11 protein_id gb|AEB85915.1||gnl|jgi|Alide2_3589 note KEGG: dia:Dtpsy_2470 molybdenum ABC transporter, periplasmic molybdate-binding protein~TIGRFAM: Molybdenum ABC transporter, periplasmic binding protein~PFAM: Bacterial extracellular solute-binding, family 1 inference protein motif:TFAM:TIGR01256 db_xref GO:0015412 db_xref InterPro:IPR005950 db_xref InterPro:IPR006059 3727522 3728205 gene locus_tag Alide2_3590 3727522 3728205 CDS product molybdate ABC transporter, inner membrane subunit transl_table 11 protein_id gb|AEB85916.1||gnl|jgi|Alide2_3590 note KEGG: ajs:Ajs_3125 molybdate ABC transporter, inner membrane subunit~TIGRFAM: Molybdate ABC transporter, permease protein~PFAM: Binding-protein-dependent transport systems inner membrane component inference protein motif:TFAM:TIGR02141 db_xref GO:0015098 db_xref InterPro:IPR000515 db_xref InterPro:IPR011867 3728202 3729278 gene locus_tag Alide2_3591 3728202 3729278 CDS product molybdate ABC transporter, ATPase subunit EC_number 3.6.3.29 transl_table 11 protein_id gb|AEB85917.1||gnl|jgi|Alide2_3591 note SMART: ATPase, AAA+ type, core~TIGRFAM: Molybdate ABC transporter, ATP-binding protein~KEGG: ajs:Ajs_3126 molybdate ABC transporter, ATPase subunit~PFAM: ABC transporter-like; Transport-associated OB, type 1 inference protein motif:TFAM:TIGR02142 db_xref GO:0005524 db_xref GO:0015098 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 db_xref InterPro:IPR005116 db_xref InterPro:IPR011868 3729393 3730322 gene locus_tag Alide2_3592 3729393 3730322 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85918.1||gnl|jgi|Alide2_3592 note KEGG: pna:Pnap_0462 hypothetical protein inference similar to AA sequence:KEGG:Pnap_0462 3731170 3730343 gene locus_tag Alide2_3593 3731170 3730343 CDS product extracellular solute-binding protein family 1 transl_table 11 protein_id gb|AEB85919.1||gnl|jgi|Alide2_3593 note PFAM: Bacterial extracellular solute-binding, family 1~KEGG: ajs:Ajs_3127 extracellular solute-binding protein inference protein motif:PFAM:PF01547 db_xref GO:0005215 db_xref InterPro:IPR006059 3731943 3731167 gene locus_tag Alide2_3594 3731943 3731167 CDS product Phosphonate-transporting ATPase EC_number 3.6.3.28 transl_table 11 protein_id gb|AEB85920.1||gnl|jgi|Alide2_3594 note PFAM: ABC transporter-like~KEGG: ajs:Ajs_3128 ABC transporter related~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.28 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 3732674 3731940 gene locus_tag Alide2_3595 3732674 3731940 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB85921.1||gnl|jgi|Alide2_3595 note PFAM: Binding-protein-dependent transport systems inner membrane component~KEGG: ajs:Ajs_3129 binding-protein-dependent transport systems inner membrane component inference protein motif:PFAM:PF00528 db_xref GO:0005215 db_xref InterPro:IPR000515 3732725 3733864 gene locus_tag Alide2_3596 3732725 3733864 CDS product transcriptional regulator of molybdate metabolism, LysR family transl_table 11 protein_id gb|AEB85922.1||gnl|jgi|Alide2_3596 note PFAM: HTH transcriptional regulator, LysR~KEGG: ajs:Ajs_3130 molybdate metabolism transcriptional regulator inference protein motif:PFAM:PF00126 db_xref GO:0003700 db_xref InterPro:IPR000847 3733861 3735423 gene locus_tag Alide2_3597 3733861 3735423 CDS product phospholipase D/Transphosphatidylase transl_table 11 protein_id gb|AEB85923.1||gnl|jgi|Alide2_3597 note KEGG: maq:Maqu_3283 phospholipase D/transphosphatidylase~PFAM: Phospholipase D/Transphosphatidylase~SMART: Phospholipase D/Transphosphatidylase inference protein motif:PFAM:PF00614 db_xref GO:0003824 db_xref InterPro:IPR001736 3737126 3735480 gene locus_tag Alide2_3598 3737126 3735480 CDS product o-succinylbenzoate--CoA ligase EC_number 6.2.1.26 transl_table 11 protein_id gb|AEB85924.1||gnl|jgi|Alide2_3598 note KEGG: dia:Dtpsy_2483 AMP-dependent synthetase and ligase~PFAM: AMP-dependent synthetase/ligase inference protein motif:PRIAM:6.2.1.26 db_xref InterPro:IPR000873 3737466 3739391 gene locus_tag Alide2_3599 3737466 3739391 CDS product DNA primase transl_table 11 protein_id gb|AEB85925.1||gnl|jgi|Alide2_3599 note TIGRFAM: DNA primase, DnaG~KEGG: ajs:Ajs_3137 DNA primase inference protein motif:TFAM:TIGR01391 db_xref GO:0003896 db_xref InterPro:IPR002694 db_xref InterPro:IPR006171 db_xref InterPro:IPR006295 db_xref InterPro:IPR013264 db_xref InterPro:IPR019475 3739650 3742058 gene locus_tag Alide2_3600 3739650 3742058 CDS product RNA polymerase, sigma 70 subunit, RpoD transl_table 11 protein_id gb|AEB85926.1||gnl|jgi|Alide2_3600 note KEGG: dia:Dtpsy_2485 RNA polymerase, sigma 70 subunit, RpoD~TIGRFAM: RNA polymerase sigma factor RpoD, C-terminal; RNA polymerase sigma-70~PFAM: RNA polymerase sigma factor 70, non-essential domain; RNA polymerase sigma factor 70, region 1.1; RNA polymerase sigma-70 region 1.2; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 3; RNA polymerase sigma-70 region 4 inference protein motif:TFAM:TIGR02393 db_xref GO:0003677 db_xref GO:0003700 db_xref GO:0016987 db_xref InterPro:IPR007127 db_xref InterPro:IPR007624 db_xref InterPro:IPR007627 db_xref InterPro:IPR007630 db_xref InterPro:IPR007631 db_xref InterPro:IPR009042 db_xref InterPro:IPR012760 db_xref InterPro:IPR014284 3742178 3742264 gene locus_tag Alide2_3601 pseudo 3742323 3743006 gene locus_tag Alide2_3602 3742323 3743006 CDS product methyladenine glycosylase transl_table 11 protein_id gb|AEB85927.1||gnl|jgi|Alide2_3602 note KEGG: neu:NE0447 hypothetical protein~manually curated~PFAM: Methyladenine glycosylase inference protein motif:PFAM:PF03352 db_xref GO:0008725 db_xref InterPro:IPR005019 3743053 3744003 gene locus_tag Alide2_3603 3743053 3744003 CDS product 2-dehydropantoate 2-reductase EC_number 1.1.1.169 transl_table 11 protein_id gb|AEB85928.1||gnl|jgi|Alide2_3603 note TIGRFAM: Ketopantoate reductase ApbA/PanE~KEGG: ajs:Ajs_3139 2-dehydropantoate 2-reductase~PFAM: Ketopantoate reductase ApbA/PanE, N-terminal; Ketopantoate reductase ApbA/PanE, C-terminal inference protein motif:TFAM:TIGR00745 db_xref GO:0016491 db_xref InterPro:IPR003710 db_xref InterPro:IPR013332 db_xref InterPro:IPR013752 3745078 3744077 gene locus_tag Alide2_3604 3745078 3744077 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85929.1||gnl|jgi|Alide2_3604 note KEGG: dia:Dtpsy_2488 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_2488 db_xref InterPro:IPR005064 3746305 3745112 gene locus_tag Alide2_3605 3746305 3745112 CDS product Formyl-CoA transferase EC_number 2.8.3.16 transl_table 11 protein_id gb|AEB85930.1||gnl|jgi|Alide2_3605 note KEGG: ajs:Ajs_3142 L-carnitine dehydratase/bile acid-inducible protein F~PFAM: CoA-transferase family III inference protein motif:PRIAM:2.8.3.16 db_xref InterPro:IPR003673 3747265 3746336 gene locus_tag Alide2_3606 3747265 3746336 CDS product Hydroxymethylglutaryl-CoA lyase EC_number 4.1.3.4 transl_table 11 protein_id gb|AEB85931.1||gnl|jgi|Alide2_3606 note KEGG: dia:Dtpsy_2490 pyruvate carboxyltransferase~PFAM: Pyruvate carboxyltransferase inference protein motif:PRIAM:4.1.3.4 db_xref InterPro:IPR000891 3747374 3748303 gene locus_tag Alide2_3607 3747374 3748303 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB85932.1||gnl|jgi|Alide2_3607 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: ajs:Ajs_3144 LysR family transcriptional regulator inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 3748455 3748760 gene locus_tag Alide2_3608 3748455 3748760 CDS product putative transcriptional regulator transl_table 11 protein_id gb|AEB85933.1||gnl|jgi|Alide2_3608 note KEGG: dia:Dtpsy_2492 putative transcriptional regulator inference similar to AA sequence:KEGG:Dtpsy_2492 3748876 3749235 gene locus_tag Alide2_3609 3748876 3749235 CDS product Peptidylprolyl isomerase EC_number 5.2.1.8 transl_table 11 protein_id gb|AEB85934.1||gnl|jgi|Alide2_3609 note KEGG: dia:Dtpsy_2493 peptidylprolyl isomerase~PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type inference protein motif:PRIAM:5.2.1.8 db_xref InterPro:IPR001179 3750684 3749293 gene locus_tag Alide2_3610 3750684 3749293 CDS product Ribosomal protein S12 methylthiotransferase rimO transl_table 11 protein_id gb|AEB85935.1||gnl|jgi|Alide2_3610 note SMART: Elongator protein 3/MiaB/NifB~TIGRFAM: Ribosomal protein S12 methylthiotransferase RimO; Methylthiotransferase~KEGG: dia:Dtpsy_2494 ribosomal protein S12 methylthiotransferase~HAMAP: Ribosomal protein S12 methylthiotransferase RimO~PFAM: Methylthiotransferase, N-terminal; Radical SAM inference protein motif:HAMAP:MF_01865 db_xref InterPro:IPR005839 db_xref InterPro:IPR005840 db_xref InterPro:IPR006638 db_xref InterPro:IPR007197 db_xref InterPro:IPR013848 3751261 3750722 gene locus_tag Alide2_3611 3751261 3750722 CDS product polyhydroxyalkonate synthesis repressor, PhaR transl_table 11 protein_id gb|AEB85936.1||gnl|jgi|Alide2_3611 note KEGG: dia:Dtpsy_2495 polyhydroxyalkonate synthesis repressor, PhaR~TIGRFAM: Polyhydroxyalkanoate synthesis repressor PhaR~PFAM: PHA accumulation regulator DNA-binding, N-terminal; PHB accumulation regulatory inference protein motif:TFAM:TIGR01848 db_xref InterPro:IPR007897 db_xref InterPro:IPR010134 db_xref InterPro:IPR012909 3751762 3751454 gene locus_tag Alide2_3612 3751762 3751454 CDS product RNP-1 like RNA-binding protein transl_table 11 protein_id gb|AEB85937.1||gnl|jgi|Alide2_3612 note KEGG: dia:Dtpsy_2389 RNP-1 like RNA-binding protein~PFAM: RNA recognition motif domain~SMART: RNA recognition motif domain inference protein motif:PFAM:PF00076 db_xref GO:0003676 db_xref InterPro:IPR000504 3752042 3751827 gene locus_tag Alide2_3613 3752042 3751827 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85938.1||gnl|jgi|Alide2_3613 note KEGG: dia:Dtpsy_2387 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_2387 3752522 3752446 gene locus_tag Alide2_R0050 note tRNA-Val4 3752522 3752446 tRNA product tRNA-Val 3754827 3752581 gene locus_tag Alide2_3614 3754827 3752581 CDS product (p)ppGpp synthetase I, SpoT/RelA EC_number 2.7.6.5 transl_table 11 protein_id gb|AEB85939.1||gnl|jgi|Alide2_3614 note SMART: RelA/SpoT~TIGRFAM: RelA/SpoT protein~KEGG: ajs:Ajs_3149 (p)ppGpp synthetase I, SpoT/RelA~PFAM: RelA/SpoT; TGS; Amino acid-binding ACT inference protein motif:TFAM:TIGR00691 db_xref InterPro:IPR002912 db_xref InterPro:IPR004095 db_xref InterPro:IPR004811 db_xref InterPro:IPR007685 3755765 3754824 gene locus_tag Alide2_3615 3755765 3754824 CDS product alpha/beta hydrolase fold protein transl_table 11 protein_id gb|AEB85940.1||gnl|jgi|Alide2_3615 note KEGG: ajs:Ajs_3150 alpha/beta hydrolase fold~manually curated~PFAM: Alpha/beta hydrolase fold-1 inference protein motif:PFAM:PF00561 db_xref InterPro:IPR000073 3755835 3756617 gene locus_tag Alide2_3616 3755835 3756617 CDS product 3-hydroxybutyrate dehydrogenase EC_number 1.1.1.30 transl_table 11 protein_id gb|AEB85941.1||gnl|jgi|Alide2_3616 note TIGRFAM: 3-hydroxybutyrate dehydrogenase~KEGG: dia:Dtpsy_2498 3-hydroxybutyrate dehydrogenase~PFAM: Short-chain dehydrogenase/reductase SDR inference protein motif:TFAM:TIGR01963 db_xref GO:0003858 db_xref InterPro:IPR002198 db_xref InterPro:IPR011294 3757400 3756672 gene locus_tag Alide2_3617 3757400 3756672 CDS product protein of unknown function DUF541 transl_table 11 protein_id gb|AEB85942.1||gnl|jgi|Alide2_3617 note PFAM: Protein of unknown function DUF541~KEGG: dia:Dtpsy_2499 protein of unknown function DUF541 inference protein motif:PFAM:PF04402 db_xref InterPro:IPR007497 3757597 3758328 gene locus_tag Alide2_3618 3757597 3758328 CDS product two component transcriptional regulator, winged helix family transl_table 11 protein_id gb|AEB85943.1||gnl|jgi|Alide2_3618 note KEGG: dia:Dtpsy_2500 osmolarity response regulator~PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal~SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal inference protein motif:PFAM:PF00072 db_xref GO:0000156 db_xref GO:0003677 db_xref InterPro:IPR001789 db_xref InterPro:IPR001867 3758401 3759906 gene locus_tag Alide2_3619 3758401 3759906 CDS product integral membrane sensor signal transduction histidine kinase transl_table 11 protein_id gb|AEB85944.1||gnl|jgi|Alide2_3619 note KEGG: dia:Dtpsy_2501 histidine kinase~PFAM: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain~SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain inference protein motif:PFAM:PF02518 db_xref GO:0000155 db_xref GO:0004871 db_xref GO:0005524 db_xref InterPro:IPR003594 db_xref InterPro:IPR003660 db_xref InterPro:IPR003661 3760458 3759979 gene locus_tag Alide2_3620 3760458 3759979 CDS product 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase transl_table 11 protein_id gb|AEB85945.1||gnl|jgi|Alide2_3620 note KEGG: dia:Dtpsy_2502 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase~TIGRFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core~PFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core inference protein motif:TFAM:TIGR00151 db_xref GO:0008685 db_xref InterPro:IPR003526 3761327 3760479 gene locus_tag Alide2_3621 3761327 3760479 CDS product 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase EC_number 2.7.7.60 transl_table 11 protein_id gb|AEB85946.1||gnl|jgi|Alide2_3621 note PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase~TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase~HAMAP: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase~KEGG: dia:Dtpsy_2503 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase inference protein motif:HAMAP:MF_00108 db_xref InterPro:IPR001228 3761406 3764897 gene locus_tag Alide2_3622 3761406 3764897 CDS product transcription-repair coupling factor transl_table 11 protein_id gb|AEB85947.1||gnl|jgi|Alide2_3622 note TIGRFAM: Transcription-repair coupling factor~PFAM: Transcription factor CarD; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; Transcription-repair-coupling factor domain~KEGG: ajs:Ajs_3157 transcription-repair coupling factor~SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal inference protein motif:TFAM:TIGR00580 db_xref GO:0003684 db_xref GO:0004386 db_xref GO:0005524 db_xref InterPro:IPR001650 db_xref InterPro:IPR003711 db_xref InterPro:IPR004576 db_xref InterPro:IPR005118 db_xref InterPro:IPR011545 db_xref InterPro:IPR014001 3764904 3765584 gene locus_tag Alide2_3623 3764904 3765584 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85948.1||gnl|jgi|Alide2_3623 note KEGG: dia:Dtpsy_2505 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_2505 3767925 3765751 gene locus_tag Alide2_3624 3767925 3765751 CDS product HAD-superfamily hydrolase, subfamily IA, variant 3 transl_table 11 protein_id gb|AEB85949.1||gnl|jgi|Alide2_3624 note KEGG: ppw:PputW619_2172 HAD family hydrolase~TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3~PFAM: Haloacid dehalogenase-like hydrolase; Mannitol dehydrogenase, C-terminal inference protein motif:TFAM:TIGR01509 db_xref GO:0016787 db_xref InterPro:IPR005834 db_xref InterPro:IPR006402 db_xref InterPro:IPR013118 3768267 3768986 gene locus_tag Alide2_3625 3768267 3768986 CDS product phosphoserine phosphatase SerB EC_number 3.1.3.3 transl_table 11 protein_id gb|AEB85950.1||gnl|jgi|Alide2_3625 note TIGRFAM: Phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB, PSPase-like~KEGG: dia:Dtpsy_2506 phosphoserine phosphatase SerB~PFAM: Haloacid dehalogenase-like hydrolase inference protein motif:TFAM:TIGR00338 db_xref GO:0004647 db_xref GO:0016791 db_xref InterPro:IPR004469 db_xref InterPro:IPR005834 db_xref InterPro:IPR006383 3769043 3769786 gene locus_tag Alide2_3626 3769043 3769786 CDS product two component transcriptional regulator, LytTR family transl_table 11 protein_id gb|AEB85951.1||gnl|jgi|Alide2_3626 note KEGG: ajs:Ajs_3314 LytR/AlgR family transcriptional regulator~PFAM: Signal transduction response regulator, receiver domain; LytTr, DNA-binding domain~SMART: Signal transduction response regulator, receiver domain; LytTr, DNA-binding domain inference protein motif:PFAM:PF00072 db_xref GO:0000156 db_xref InterPro:IPR001789 db_xref InterPro:IPR007492 3770704 3769886 gene locus_tag Alide2_3627 3770704 3769886 CDS product zinc/iron permease transl_table 11 protein_id gb|AEB85952.1||gnl|jgi|Alide2_3627 note PFAM: Zinc/iron permease~KEGG: dia:Dtpsy_2667 zinc/iron permease inference protein motif:PFAM:PF02535 db_xref GO:0046873 db_xref InterPro:IPR003689 3771699 3770815 gene locus_tag Alide2_3628 3771699 3770815 CDS product Carboxymethylenebutenolidase EC_number 3.1.1.45 transl_table 11 protein_id gb|AEB85953.1||gnl|jgi|Alide2_3628 note KEGG: dia:Dtpsy_2668 carboxymethylenebutenolidase~PFAM: Dienelactone hydrolase inference protein motif:PRIAM:3.1.1.45 db_xref InterPro:IPR002925 3772549 3771785 gene locus_tag Alide2_3629 3772549 3771785 CDS product Enoyl-CoA hydratase/isomerase transl_table 11 protein_id gb|AEB85954.1||gnl|jgi|Alide2_3629 note PFAM: Crotonase, core~KEGG: bpt:Bpet4160 putative enoyl-CoA hydratase inference protein motif:PFAM:PF00378 db_xref GO:0003824 db_xref InterPro:IPR001753 3773766 3772573 gene locus_tag Alide2_3630 3773766 3772573 CDS product Formyl-CoA transferase EC_number 2.8.3.16 transl_table 11 protein_id gb|AEB85955.1||gnl|jgi|Alide2_3630 note KEGG: bpt:Bpet4161 acyl-CoA transferase/carnitine dehydratase~PFAM: CoA-transferase family III inference protein motif:PRIAM:2.8.3.16 db_xref InterPro:IPR003673 3774768 3773794 gene locus_tag Alide2_3631 3774768 3773794 CDS product putative secreted protein transl_table 11 protein_id gb|AEB85956.1||gnl|jgi|Alide2_3631 note KEGG: bpt:Bpet4162 putative secreted protein inference similar to AA sequence:KEGG:Bpet4162 db_xref InterPro:IPR005064 3774903 3775898 gene locus_tag Alide2_3632 3774903 3775898 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB85957.1||gnl|jgi|Alide2_3632 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: reu:Reut_A3085 LysR family transcriptional regulator inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 3776430 3775906 gene locus_tag Alide2_3633 3776430 3775906 CDS product Carboxymuconolactone decarboxylase transl_table 11 protein_id gb|AEB85958.1||gnl|jgi|Alide2_3633 note PFAM: Carboxymuconolactone decarboxylase~KEGG: axy:AXYL_04995 alkylhydroperoxidase AhpD family core domain-containing protein 7 inference protein motif:PFAM:PF02627 db_xref InterPro:IPR003779 3777418 3776450 gene locus_tag Alide2_3634 3777418 3776450 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85959.1||gnl|jgi|Alide2_3634 note KEGG: dac:Daci_0250 hypothetical protein inference similar to AA sequence:KEGG:Daci_0250 db_xref InterPro:IPR005064 3778266 3777451 gene locus_tag Alide2_3635 3778266 3777451 CDS product 3-oxoacyl-(acyl-carrier-protein) reductase EC_number 1.1.1.100 transl_table 11 protein_id gb|AEB85960.1||gnl|jgi|Alide2_3635 note KEGG: axy:AXYL_00411 short chain dehydrogenase family protein 3~PFAM: Short-chain dehydrogenase/reductase SDR inference protein motif:PRIAM:1.1.1.100 db_xref InterPro:IPR002198 3778343 3779272 gene locus_tag Alide2_3636 3778343 3779272 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB85961.1||gnl|jgi|Alide2_3636 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: axy:AXYL_00410 LysR family regulatory helix-turn-helix protein 12 inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 3782054 3779289 gene locus_tag Alide2_3637 3782054 3779289 CDS product DNA polymerase I EC_number 2.7.7.7 transl_table 11 protein_id gb|AEB85962.1||gnl|jgi|Alide2_3637 note SMART: DNA-directed DNA polymerase, family A, palm domain; 5'-3' exonuclease, N-terminal; Helix-hairpin-helix motif, class 2; 3'-5' exonuclease~TIGRFAM: DNA polymerase 1~KEGG: dia:Dtpsy_2669 DNA polymerase I~PFAM: DNA-directed DNA polymerase, family A, palm domain; 5'-3' exonuclease, alpha-helical arch, N-terminal; 5'-3' exonuclease, SAM-fold domain; 3'-5' exonuclease inference protein motif:TFAM:TIGR00593 db_xref GO:0003887 db_xref InterPro:IPR001098 db_xref InterPro:IPR002421 db_xref InterPro:IPR002562 db_xref InterPro:IPR008918 db_xref InterPro:IPR018320 db_xref InterPro:IPR020046 db_xref InterPro:IPR020047 3782136 3782558 gene locus_tag Alide2_3638 3782136 3782558 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85963.1||gnl|jgi|Alide2_3638 note KEGG: ajs:Ajs_3318 hypothetical protein inference similar to AA sequence:KEGG:Ajs_3318 3782590 3782955 gene locus_tag Alide2_3639 3782590 3782955 CDS product Protein of unknown function DUF2782 transl_table 11 protein_id gb|AEB85964.1||gnl|jgi|Alide2_3639 note PFAM: Protein of unknown function DUF2782~KEGG: dia:Dtpsy_2671 hypothetical protein inference protein motif:PFAM:PF11191 db_xref InterPro:IPR021357 3783033 3783983 gene locus_tag Alide2_3640 3783033 3783983 CDS product homoserine kinase EC_number 2.7.1.39 transl_table 11 protein_id gb|AEB85965.1||gnl|jgi|Alide2_3640 note TIGRFAM: Homoserine kinase ThrB~KEGG: ajs:Ajs_3320 homoserine kinase~PFAM: Aminoglycoside phosphotransferase inference protein motif:TFAM:TIGR00938 db_xref GO:0004413 db_xref InterPro:IPR002575 db_xref InterPro:IPR005280 3784030 3784851 gene locus_tag Alide2_3641 3784030 3784851 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85966.1||gnl|jgi|Alide2_3641 note KEGG: ajs:Ajs_3321 hypothetical protein inference similar to AA sequence:KEGG:Ajs_3321 3786480 3784864 gene locus_tag Alide2_3642 3786480 3784864 CDS product diguanylate cyclase with extracellular sensor transl_table 11 protein_id gb|AEB85967.1||gnl|jgi|Alide2_3642 note TIGRFAM: Diguanylate cyclase, predicted~PFAM: Diguanylate cyclase, predicted; Extracellular solute-binding protein, family 3~KEGG: dba:Dbac_1471 diguanylate cyclase~SMART: Diguanylate cyclase, predicted; Extracellular solute-binding protein, family 3 inference protein motif:TFAM:TIGR00254 db_xref InterPro:IPR000160 db_xref InterPro:IPR001638 3786748 3788697 gene locus_tag Alide2_3643 3786748 3788697 CDS product protein of unknown function DUF839 transl_table 11 protein_id gb|AEB85968.1||gnl|jgi|Alide2_3643 note PFAM: Protein of unknown function DUF839~KEGG: aav:Aave_1926 putative exported alkaline phosphatase inference protein motif:PFAM:PF05787 db_xref InterPro:IPR008557 3791109 3788719 gene locus_tag Alide2_3644 3791109 3788719 CDS product UvrD/REP helicase transl_table 11 protein_id gb|AEB85969.1||gnl|jgi|Alide2_3644 note PFAM: DNA helicase, UvrD/REP type~KEGG: dia:Dtpsy_2677 UvrD/REP helicase inference protein motif:PFAM:PF00580 db_xref GO:0003677 db_xref GO:0004003 db_xref GO:0005524 db_xref InterPro:IPR000212 3791311 3792288 gene locus_tag Alide2_3645 3791311 3792288 CDS product guanosine monophosphate reductase EC_number 1.7.1.7 transl_table 11 protein_id gb|AEB85970.1||gnl|jgi|Alide2_3645 note TIGRFAM: Guanosine monophosphate reductase 2~KEGG: aav:Aave_1911 guanosine 5'-monophosphate oxidoreductase~PFAM: IMP dehydrogenase/GMP reductase inference protein motif:TFAM:TIGR01306 db_xref GO:0003920 db_xref InterPro:IPR001093 db_xref InterPro:IPR005994 3792373 3792448 gene locus_tag Alide2_R0051 note tRNA-Lys1 3792373 3792448 tRNA product tRNA-Lys 3792948 3792625 gene locus_tag Alide2_3646 3792948 3792625 CDS product Protein of unknown function DUF2149 transl_table 11 protein_id gb|AEB85971.1||gnl|jgi|Alide2_3646 note PFAM: Protein of unknown function DUF2149~KEGG: dia:Dtpsy_2683 hypothetical protein inference protein motif:PFAM:PF09919 db_xref InterPro:IPR018676 3793481 3792945 gene locus_tag Alide2_3647 3793481 3792945 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85972.1||gnl|jgi|Alide2_3647 note KEGG: gpb:HDN1F_26000 hypothetical protein inference similar to AA sequence:KEGG:HDN1F_26000 3794140 3793544 gene locus_tag Alide2_3648 3794140 3793544 CDS product kinetoplast-associated protein-like protein transl_table 11 protein_id gb|AEB85973.1||gnl|jgi|Alide2_3648 note KEGG: lma:LmjF27.0240 kinetoplast-associated protein-like protein inference similar to AA sequence:KEGG:LmjF27.0240 3799097 3795030 gene locus_tag Alide2_3649 3799097 3795030 CDS product Cobaltochelatase EC_number 6.6.1.2 transl_table 11 protein_id gb|AEB85974.1||gnl|jgi|Alide2_3649 note KEGG: dia:Dtpsy_2685 cobaltochelatase~PFAM: CobN/magnesium chelatase inference protein motif:PRIAM:6.6.1.2 db_xref InterPro:IPR003672 3801104 3799149 gene locus_tag Alide2_3650 3801104 3799149 CDS product TonB-dependent receptor plug transl_table 11 protein_id gb|AEB85975.1||gnl|jgi|Alide2_3650 note PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel~KEGG: dia:Dtpsy_2686 TonB-dependent receptor plug inference protein motif:PFAM:PF07715 db_xref GO:0004872 db_xref GO:0005215 db_xref InterPro:IPR000531 db_xref InterPro:IPR012910 3802593 3801424 gene locus_tag Alide2_3651 3802593 3801424 CDS product NnrS family protein transl_table 11 protein_id gb|AEB85976.1||gnl|jgi|Alide2_3651 note PFAM: NnrS~KEGG: dia:Dtpsy_2680 NnrS family protein inference protein motif:PFAM:PF05940 db_xref InterPro:IPR010266 3803575 3802715 gene locus_tag Alide2_3652 3803575 3802715 CDS product Taurine-transporting ATPase EC_number 3.6.3.36 transl_table 11 protein_id gb|AEB85977.1||gnl|jgi|Alide2_3652 note PFAM: ABC transporter-like~KEGG: dia:Dtpsy_2681 ABC transporter related~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.36 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 3804401 3803595 gene locus_tag Alide2_3653 3804401 3803595 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB85978.1||gnl|jgi|Alide2_3653 note PFAM: Binding-protein-dependent transport systems inner membrane component~KEGG: dia:Dtpsy_2682 binding-protein-dependent transport systems inner membrane component inference protein motif:PFAM:PF00528 db_xref GO:0005215 db_xref InterPro:IPR000515 3805414 3804398 gene locus_tag Alide2_3654 3805414 3804398 CDS product putative periplasmic component of ABC-type transport system transl_table 11 protein_id gb|AEB85979.1||gnl|jgi|Alide2_3654 note KEGG: dia:Dtpsy_2687 putative periplasmic component of ABC-type transport system inference similar to AA sequence:KEGG:Dtpsy_2687 3807569 3805416 gene locus_tag Alide2_3655 3807569 3805416 CDS product TonB-dependent receptor transl_table 11 protein_id gb|AEB85980.1||gnl|jgi|Alide2_3655 note PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug~KEGG: dia:Dtpsy_2688 TonB-dependent receptor inference protein motif:PFAM:PF00593 db_xref GO:0004872 db_xref GO:0005215 db_xref InterPro:IPR000531 db_xref InterPro:IPR012910 3807645 3808376 gene locus_tag Alide2_3656 3807645 3808376 CDS product transcriptional regulator, Crp/Fnr family transl_table 11 protein_id gb|AEB85981.1||gnl|jgi|Alide2_3656 note KEGG: dia:Dtpsy_2689 transcriptional regulator, Crp/Fnr family~PFAM: Cyclic nucleotide-binding domain~SMART: Cyclic nucleotide-binding domain; HTH transcriptional regulator, Crp inference protein motif:PFAM:PF00027 db_xref InterPro:IPR000595 db_xref InterPro:IPR001808 3808412 3808771 gene locus_tag Alide2_3657 3808412 3808771 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85982.1||gnl|jgi|Alide2_3657 note KEGG: ajs:Ajs_3342 hypothetical protein inference similar to AA sequence:KEGG:Ajs_3342 3808851 3809336 gene locus_tag Alide2_3658 3808851 3809336 CDS product protein of unknown function DUF461 transl_table 11 protein_id gb|AEB85983.1||gnl|jgi|Alide2_3658 note PFAM: DR1885-like metal-binding protein~KEGG: dia:Dtpsy_2691 protein of unknown function DUF461 inference protein motif:PFAM:PF04314 db_xref InterPro:IPR007410 3809524 3810756 gene locus_tag Alide2_3659 3809524 3810756 CDS product drug resistance transporter, Bcr/CflA subfamily transl_table 11 protein_id gb|AEB85984.1||gnl|jgi|Alide2_3659 note KEGG: ajs:Ajs_3344 Bcr/CflA subfamily drug resistance transporter~TIGRFAM: Drug resistance transporter Bcr/CflA subfamily~PFAM: Major facilitator superfamily MFS-1 inference protein motif:TFAM:TIGR00710 db_xref GO:0005215 db_xref InterPro:IPR004812 db_xref InterPro:IPR011701 3811621 3810779 gene locus_tag Alide2_3660 3811621 3810779 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85985.1||gnl|jgi|Alide2_3660 note KEGG: vap:Vapar_0607 hypothetical protein inference similar to AA sequence:KEGG:Vapar_0607 3811967 3811671 gene locus_tag Alide2_3661 3811967 3811671 CDS product YCII-related protein transl_table 11 protein_id gb|AEB85986.1||gnl|jgi|Alide2_3661 note PFAM: YCII-related~KEGG: cti:RALTA_B1424 YciI-like protein inference protein motif:PFAM:PF03795 db_xref InterPro:IPR005545 3812989 3812006 gene locus_tag Alide2_3662 3812989 3812006 CDS product putative NagM-like protein transl_table 11 protein_id gb|AEB85987.1||gnl|jgi|Alide2_3662 note KEGG: reh:PHG396 putative NagM-like protein inference similar to AA sequence:KEGG:PHG396 db_xref InterPro:IPR005064 3813218 3813907 gene locus_tag Alide2_3663 3813218 3813907 CDS product 3-oxoacid CoA-transferase, A subunit EC_number 2.8.3.6 transl_table 11 protein_id gb|AEB85988.1||gnl|jgi|Alide2_3663 note SMART: Coenzyme A transferase~TIGRFAM: 3-oxoacid CoA-transferase, subunit A~KEGG: rpf:Rpic12D_2066 3-oxoacid CoA-transferase, A subunit~PFAM: Coenzyme A transferase inference protein motif:TFAM:TIGR02429 db_xref GO:0008410 db_xref InterPro:IPR004165 db_xref InterPro:IPR012792 3813904 3814557 gene locus_tag Alide2_3664 3813904 3814557 CDS product 3-oxoacid CoA-transferase, B subunit EC_number 2.8.3.6 transl_table 11 protein_id gb|AEB85989.1||gnl|jgi|Alide2_3664 note SMART: Coenzyme A transferase~TIGRFAM: 3-oxoacid CoA-transferase, subunit B~KEGG: lch:Lcho_0832 3-oxoacid CoA-transferase, B subunit~PFAM: Coenzyme A transferase inference protein motif:TFAM:TIGR02428 db_xref GO:0008410 db_xref InterPro:IPR004165 db_xref InterPro:IPR012791 3814603 3814881 gene locus_tag Alide2_3665 3814603 3814881 CDS product muconolactone delta-isomerase EC_number 5.3.3.4 transl_table 11 protein_id gb|AEB85990.1||gnl|jgi|Alide2_3665 note TIGRFAM: Muconolactone delta-isomerase~KEGG: mno:Mnod_2374 muconolactone delta-isomerase~PFAM: Muconolactone delta-isomerase inference protein motif:TFAM:TIGR03221 db_xref InterPro:IPR003464 3814895 3815788 gene locus_tag Alide2_3666 3814895 3815788 CDS product beta-lactamase domain protein transl_table 11 protein_id gb|AEB85991.1||gnl|jgi|Alide2_3666 note KEGG: reu:Reut_A1508 beta-lactamase-like~PFAM: Beta-lactamase-like~SMART: Beta-lactamase-like inference protein motif:PFAM:PF00753 db_xref GO:0016787 db_xref InterPro:IPR001279 3816681 3815755 gene locus_tag Alide2_3667 3816681 3815755 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB85992.1||gnl|jgi|Alide2_3667 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: reu:Reut_A1507 regulatory protein, LysR:LysR, substrate-binding inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 3816854 3817738 gene locus_tag Alide2_3668 3816854 3817738 CDS product hypothetical protein transl_table 11 protein_id gb|AEB85993.1||gnl|jgi|Alide2_3668 note KEGG: vap:Vapar_0607 hypothetical protein inference similar to AA sequence:KEGG:Vapar_0607 3819208 3817745 gene locus_tag Alide2_3669 3819208 3817745 CDS product diguanylate cyclase transl_table 11 protein_id gb|AEB85994.1||gnl|jgi|Alide2_3669 note TIGRFAM: Diguanylate cyclase, predicted~PFAM: Diguanylate cyclase, predicted~KEGG: aav:Aave_1895 diguanylate cyclase~SMART: Diguanylate cyclase, predicted inference protein motif:TFAM:TIGR00254 db_xref InterPro:IPR000160 3821101 3819329 gene locus_tag Alide2_3670 3821101 3819329 CDS product DEAD/DEAH box helicase domain protein transl_table 11 protein_id gb|AEB85995.1||gnl|jgi|Alide2_3670 note KEGG: dia:Dtpsy_2693 DEAD/DEAH box helicase domain protein~PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal~SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal inference protein motif:PFAM:PF00270 db_xref GO:0003676 db_xref GO:0004386 db_xref GO:0005524 db_xref GO:0008026 db_xref InterPro:IPR001650 db_xref InterPro:IPR011545 db_xref InterPro:IPR014001 3822501 3821368 gene locus_tag Alide2_3671 3822501 3821368 CDS product Extracellular ligand-binding receptor transl_table 11 protein_id gb|AEB85996.1||gnl|jgi|Alide2_3671 note PFAM: Extracellular ligand-binding receptor~KEGG: vap:Vapar_5221 extracellular ligand-binding receptor inference protein motif:PFAM:PF01094 db_xref InterPro:IPR001828 3823236 3822625 gene locus_tag Alide2_3672 3823236 3822625 CDS product Exonuclease RNase T and DNA polymerase III transl_table 11 protein_id gb|AEB85997.1||gnl|jgi|Alide2_3672 note KEGG: dia:Dtpsy_2694 oligoribonuclease~PFAM: Exonuclease, RNase T/DNA polymerase III~SMART: Exonuclease inference protein motif:PFAM:PF00929 db_xref InterPro:IPR006055 db_xref InterPro:IPR013520 3823256 3824548 gene locus_tag Alide2_3673 3823256 3824548 CDS product Ste24 endopeptidase EC_number 3.4.24.84 transl_table 11 protein_id gb|AEB85998.1||gnl|jgi|Alide2_3673 note KEGG: dia:Dtpsy_2695 STE24 endopeptidase~PFAM: Peptidase M48 inference protein motif:PRIAM:3.4.24.84 db_xref InterPro:IPR001915 3824545 3824883 gene locus_tag Alide2_3674 3824545 3824883 CDS product pterin-4-alpha-carbinolamine dehydratase transl_table 11 protein_id gb|AEB85999.1||gnl|jgi|Alide2_3674 note manually curated~HAMAP: Transcriptional coactivator/pterin dehydratase~KEGG: dia:Dtpsy_2696 transcriptional coactivator/pterin dehydratase~PFAM: Transcriptional coactivator/pterin dehydratase inference protein motif:HAMAP:MF_00434 db_xref InterPro:IPR001533 3824893 3825864 gene locus_tag Alide2_3675 3824893 3825864 CDS product ribosome small subunit-dependent GTPase A transl_table 11 protein_id gb|AEB86000.1||gnl|jgi|Alide2_3675 note KEGG: dia:Dtpsy_2697 ribosome small subunit-dependent GTPase A~TIGRFAM: Ribosome biogenesis GTPase RsgA, putative~PFAM: Ribosome biogenesis GTPase RsgA, putative inference protein motif:TFAM:TIGR00157 db_xref GO:0003924 db_xref GO:0005525 db_xref InterPro:IPR004881 3825879 3827537 gene locus_tag Alide2_3676 3825879 3827537 CDS product sulphate transporter transl_table 11 protein_id gb|AEB86001.1||gnl|jgi|Alide2_3676 note PFAM: Sulphate transporter; Sulphate transporter/antisigma-factor antagonist STAS~KEGG: axy:AXYL_00922 permease family protein 1 inference protein motif:PFAM:PF00916 db_xref GO:0005215 db_xref InterPro:IPR002645 db_xref InterPro:IPR011547 3828626 3827544 gene locus_tag Alide2_3677 3828626 3827544 CDS product histidinol-phosphate aminotransferase EC_number 2.6.1.9 transl_table 11 protein_id gb|AEB86002.1||gnl|jgi|Alide2_3677 note TIGRFAM: Histidinol-phosphate aminotransferase~KEGG: vap:Vapar_1479 histidinol-phosphate aminotransferase~PFAM: Aminotransferase, class I/classII inference protein motif:TFAM:TIGR01141 db_xref GO:0004400 db_xref InterPro:IPR004839 db_xref InterPro:IPR005861 3829691 3828702 gene locus_tag Alide2_3678 3829691 3828702 CDS product cobalamin biosynthesis protein CbiB transl_table 11 protein_id gb|AEB86003.1||gnl|jgi|Alide2_3678 note PFAM: Cobalamin biosynthesis CobD/CbiB~KEGG: dia:Dtpsy_2698 cobalamin biosynthesis protein CbiB inference protein motif:PFAM:PF03186 db_xref InterPro:IPR004485 3830421 3829738 gene locus_tag Alide2_3679 3830421 3829738 CDS product NUDIX hydrolase transl_table 11 protein_id gb|AEB86004.1||gnl|jgi|Alide2_3679 note PFAM: NUDIX hydrolase domain~KEGG: ajs:Ajs_3351 NUDIX hydrolase inference protein motif:PFAM:PF00293 db_xref GO:0016787 db_xref InterPro:IPR000086 3830918 3830532 gene locus_tag Alide2_3680 3830918 3830532 CDS product ribosomal protein L19 transl_table 11 protein_id gb|AEB86005.1||gnl|jgi|Alide2_3680 note KEGG: dac:Daci_5342 ribosomal protein L19~TIGRFAM: Ribosomal protein L19~PFAM: Ribosomal protein L19 inference protein motif:TFAM:TIGR01024 db_xref GO:0003735 db_xref InterPro:IPR001857 3831805 3831038 gene locus_tag Alide2_3681 3831805 3831038 CDS product tRNA (guanine-N(1)-)-methyltransferase transl_table 11 protein_id gb|AEB86006.1||gnl|jgi|Alide2_3681 note PFAM: tRNA (guanine-N1-)-methyltransferase~TIGRFAM: tRNA (guanine-N1-)-methyltransferase, bacteria~HAMAP: tRNA (guanine-N1-)-methyltransferase, bacteria~KEGG: ajs:Ajs_3353 tRNA (guanine-N(1)-)-methyltransferase inference protein motif:HAMAP:MF_00605 db_xref InterPro:IPR002649 db_xref InterPro:IPR016009 3832385 3831813 gene locus_tag Alide2_3682 3832385 3831813 CDS product 16S rRNA processing protein RimM transl_table 11 protein_id gb|AEB86007.1||gnl|jgi|Alide2_3682 note KEGG: dia:Dtpsy_2702 16S rRNA-processing protein RimM~TIGRFAM: 16S rRNA processing protein RimM~PFAM: RimM protein; PRC-barrel inference protein motif:TFAM:TIGR02273 db_xref GO:0043022 db_xref InterPro:IPR002676 db_xref InterPro:IPR007903 db_xref InterPro:IPR011961 3832733 3832479 gene locus_tag Alide2_3683 3832733 3832479 CDS product ribosomal protein S16 transl_table 11 protein_id gb|AEB86008.1||gnl|jgi|Alide2_3683 note KEGG: dia:Dtpsy_2703 30S ribosomal protein S16~TIGRFAM: Ribosomal protein S16~PFAM: Ribosomal protein S16 inference protein motif:TFAM:TIGR00002 db_xref GO:0003735 db_xref InterPro:IPR000307 3832850 3833377 gene locus_tag Alide2_3684 3832850 3833377 CDS product Phosphinothricin acetyltransferase transl_table 11 protein_id gb|AEB86009.1||gnl|jgi|Alide2_3684 note KEGG: dia:Dtpsy_2704 GCN5-related N-acetyltransferase~PFAM: GCN5-related N-acetyltransferase (GNAT) domain inference protein motif:PRIAM:2.3.1.183 db_xref InterPro:IPR000182 3833400 3833846 gene locus_tag Alide2_3685 3833400 3833846 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86010.1||gnl|jgi|Alide2_3685 note KEGG: dia:Dtpsy_2705 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_2705 db_xref InterPro:IPR007829 3834910 3833900 gene locus_tag Alide2_3686 3834910 3833900 CDS product phosphate transporter transl_table 11 protein_id gb|AEB86011.1||gnl|jgi|Alide2_3686 note PFAM: Phosphate transporter~KEGG: dia:Dtpsy_2706 phosphate transporter inference protein motif:PFAM:PF01384 db_xref GO:0005315 db_xref InterPro:IPR001204 3835578 3834931 gene locus_tag Alide2_3687 3835578 3834931 CDS product putative phosphate transport regulator transl_table 11 protein_id gb|AEB86012.1||gnl|jgi|Alide2_3687 note PFAM: Putitive phosphate transport regulator~KEGG: dia:Dtpsy_2707 protein of unknown function DUF47 inference protein motif:PFAM:PF01865 db_xref InterPro:IPR018445 3835818 3836414 gene locus_tag Alide2_3688 3835818 3836414 CDS product OmpA domain-containing protein transl_table 11 protein_id gb|AEB86013.1||gnl|jgi|Alide2_3688 note KEGG: aav:Aave_1879 OmpA domain-containing protein inference similar to AA sequence:KEGG:Aave_1879 db_xref InterPro:IPR000498 3836818 3836453 gene locus_tag Alide2_3689 3836818 3836453 CDS product protein of unknown function DUF486 transl_table 11 protein_id gb|AEB86014.1||gnl|jgi|Alide2_3689 note PFAM: Protein of unknown function DUF486~KEGG: dia:Dtpsy_2708 protein of unknown function DUF486 inference protein motif:PFAM:PF04342 db_xref InterPro:IPR007437 3837639 3836911 gene locus_tag Alide2_3690 3837639 3836911 CDS product Monosaccharide-transporting ATPase EC_number 3.6.3.17 transl_table 11 protein_id gb|AEB86015.1||gnl|jgi|Alide2_3690 note PFAM: ABC transporter-like~KEGG: ajs:Ajs_3361 ABC transporter related~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.17 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 3838425 3837643 gene locus_tag Alide2_3691 3838425 3837643 CDS product Monosaccharide-transporting ATPase EC_number 3.6.3.17 transl_table 11 protein_id gb|AEB86016.1||gnl|jgi|Alide2_3691 note PFAM: ABC transporter-like~KEGG: dia:Dtpsy_2710 ABC transporter related~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.17 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 3839523 3838447 gene locus_tag Alide2_3692 3839523 3838447 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB86017.1||gnl|jgi|Alide2_3692 note PFAM: ABC transporter permease~KEGG: dia:Dtpsy_2711 inner-membrane translocator inference protein motif:PFAM:PF02653 db_xref GO:0005215 db_xref InterPro:IPR001851 3840469 3839540 gene locus_tag Alide2_3693 3840469 3839540 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB86018.1||gnl|jgi|Alide2_3693 note PFAM: ABC transporter permease~KEGG: dia:Dtpsy_2712 inner-membrane translocator inference protein motif:PFAM:PF02653 db_xref GO:0005215 db_xref InterPro:IPR001851 3841987 3840668 gene locus_tag Alide2_3694 3841987 3840668 CDS product AAA ATPase central domain protein transl_table 11 protein_id gb|AEB86019.1||gnl|jgi|Alide2_3694 note KEGG: xtr:100494158 replication-associated recombination protein A-like~PFAM: ATPase, AAA-type, core~SMART: ATPase, AAA+ type, core inference protein motif:PFAM:PF00004 db_xref GO:0005524 db_xref InterPro:IPR003593 db_xref InterPro:IPR003959 3842982 3841984 gene locus_tag Alide2_3695 3842982 3841984 CDS product integron integrase transl_table 11 protein_id gb|AEB86020.1||gnl|jgi|Alide2_3695 note KEGG: dia:Dtpsy_2714 integron integrase~TIGRFAM: Integrase, integron-type~PFAM: Integrase, catalytic core, phage inference protein motif:TFAM:TIGR02249 db_xref GO:0003677 db_xref InterPro:IPR002104 db_xref InterPro:IPR011946 3843159 3843521 gene locus_tag Alide2_3696 3843159 3843521 CDS product Cupin 2 conserved barrel domain protein transl_table 11 protein_id gb|AEB86021.1||gnl|jgi|Alide2_3696 note KEGG: syc:syc1951_c hypothetical protein~manually curated~PFAM: Cupin 2, conserved barrel inference protein motif:PFAM:PF07883 db_xref InterPro:IPR013096 3843954 3844841 gene locus_tag Alide2_3697 3843954 3844841 CDS product PDZ/DHR/GLGF domain protein transl_table 11 protein_id gb|AEB86022.1||gnl|jgi|Alide2_3697 note KEGG: pen:PSEEN2126 hypothetical protein~PFAM: PDZ/DHR/GLGF~SMART: PDZ/DHR/GLGF inference protein motif:PFAM:PF00595 db_xref GO:0005515 db_xref InterPro:IPR001478 3844911 3845588 gene locus_tag Alide2_3698 3844911 3845588 CDS product HNH endonuclease transl_table 11 protein_id gb|AEB86023.1||gnl|jgi|Alide2_3698 note KEGG: hch:HCH_04433 restriction endonuclease~PFAM: HNH endonuclease~SMART: HNH nuclease inference protein motif:PFAM:PF01844 db_xref GO:0003676 db_xref GO:0004519 db_xref InterPro:IPR002711 db_xref InterPro:IPR003615 3845653 3845898 gene locus_tag Alide2_3699 3845653 3845898 CDS product protein of unknown function DUF1010 transl_table 11 protein_id gb|AEB86024.1||gnl|jgi|Alide2_3699 note KEGG: dia:Dtpsy_2715 protein of unknown function DUF1010~manually curated~PFAM: Protein of unknown function DUF1010 inference protein motif:PFAM:PF06231 db_xref InterPro:IPR010416 3845923 3846939 gene locus_tag Alide2_3700 3845923 3846939 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86025.1||gnl|jgi|Alide2_3700 note KEGG: has:Halsa_0231 hypothetical protein inference similar to AA sequence:KEGG:Halsa_0231 3847009 3847551 gene locus_tag Alide2_3701 3847009 3847551 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86026.1||gnl|jgi|Alide2_3701 note manually curated~KEGG: vex:VEA_003218 hypothetical protein inference similar to AA sequence:KEGG:VEA_003218 3848518 3847685 gene locus_tag Alide2_3702 3848518 3847685 CDS product Integrase catalytic region transl_table 11 protein_id gb|AEB86027.1||gnl|jgi|Alide2_3702 note PFAM: Integrase, catalytic core~KEGG: tin:Tint_1916 integrase catalytic region inference protein motif:PFAM:PF00665 db_xref GO:0003677 db_xref InterPro:IPR001584 3848817 3848551 gene locus_tag Alide2_3703 3848817 3848551 CDS product transposase IS3/IS911 family protein transl_table 11 protein_id gb|AEB86028.1||gnl|jgi|Alide2_3703 note PFAM: Transposase IS3/IS911family~KEGG: pna:Pnap_4650 transposase IS3/IS911 family protein inference protein motif:PFAM:PF01527 db_xref GO:0003677 db_xref GO:0004803 db_xref InterPro:IPR002514 3849536 3850252 gene locus_tag Alide2_3704 3849536 3850252 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86029.1||gnl|jgi|Alide2_3704 note KEGG: bcm:Bcenmc03_4077 hypothetical protein inference similar to AA sequence:KEGG:Bcenmc03_4077 3850685 3850990 gene locus_tag Alide2_3705 3850685 3850990 CDS product Protein of unknown function DUF2091, periplasmic transl_table 11 protein_id gb|AEB86030.1||gnl|jgi|Alide2_3705 note PFAM: Protein of unknown function DUF2091, periplasmic~KEGG: ctt:CtCNB1_3965 hypothetical protein inference protein motif:PFAM:PF09864 db_xref InterPro:IPR018660 3851119 3851253 gene locus_tag Alide2_3706 3851119 3851253 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86031.1||gnl|jgi|Alide2_3706 inference ab initio prediction:Prodigal:1.4 3851250 3851840 gene locus_tag Alide2_3707 3851250 3851840 CDS product uracil-DNA glycosylase superfamily transl_table 11 protein_id gb|AEB86032.1||gnl|jgi|Alide2_3707 note KEGG: dia:Dtpsy_2718 uracil-DNA glycosylase superfamily inference similar to AA sequence:KEGG:Dtpsy_2718 3851863 3852819 gene locus_tag Alide2_3708 3851863 3852819 CDS product UbiA prenyltransferase transl_table 11 protein_id gb|AEB86033.1||gnl|jgi|Alide2_3708 note PFAM: UbiA prenyltransferase~KEGG: eba:ebA3963 1,4-dihydroxy-2-naphthoate octaprenyltransferase inference protein motif:PFAM:PF01040 db_xref GO:0004659 db_xref InterPro:IPR000537 3853455 3852823 gene locus_tag Alide2_3709 3853455 3852823 CDS product Outer-membrane lipoprotein carrier protein transl_table 11 protein_id gb|AEB86034.1||gnl|jgi|Alide2_3709 note TIGRFAM: Outer membrane lipoprotein carrier protein LolA, Proteobacteria~HAMAP: Outer membrane lipoprotein carrier protein LolA, Proteobacteria~KEGG: ajs:Ajs_3381 outer membrane lipoprotein carrier protein LolA~PFAM: Outer membrane lipoprotein carrier protein LolA inference protein motif:HAMAP:MF_00240 db_xref InterPro:IPR004564 db_xref InterPro:IPR018323 3855803 3853467 gene locus_tag Alide2_3710 3855803 3853467 CDS product cell division protein FtsK/SpoIIIE transl_table 11 protein_id gb|AEB86035.1||gnl|jgi|Alide2_3710 note KEGG: ajs:Ajs_3382 DNA translocase FtsK~PFAM: Cell divisionFtsK/SpoIIIE; DNA translocase FtsK gamma~SMART: DNA translocase FtsK gamma inference protein motif:PFAM:PF01580 db_xref GO:0000166 db_xref GO:0003677 db_xref GO:0005524 db_xref InterPro:IPR002543 db_xref InterPro:IPR018541 3855948 3856898 gene locus_tag Alide2_3711 3855948 3856898 CDS product thioredoxin reductase EC_number 1.8.1.9 transl_table 11 protein_id gb|AEB86036.1||gnl|jgi|Alide2_3711 note PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase~manually curated~KEGG: dia:Dtpsy_2721 thioredoxin reductase~TIGRFAM: Thioredoxin reductase inference protein motif:TFAM:TIGR01292 db_xref GO:0004791 db_xref InterPro:IPR005982 db_xref InterPro:IPR013027 3857050 3857283 gene locus_tag Alide2_3712 3857050 3857283 CDS product 50S ribosomal protein L28 transl_table 11 protein_id gb|AEB86037.1||gnl|jgi|Alide2_3712 note TIGRFAM: Ribosomal protein L28~HAMAP: Ribosomal protein L28~KEGG: ctt:CtCNB1_0883 ribosomal protein L28~PFAM: Ribosomal protein L28 inference protein motif:HAMAP:MF_00373 db_xref InterPro:IPR001383 3857304 3857474 gene locus_tag Alide2_3713 3857304 3857474 CDS product ribosomal protein L33 transl_table 11 protein_id gb|AEB86038.1||gnl|jgi|Alide2_3713 note KEGG: dia:Dtpsy_2723 50S ribosomal protein L33~TIGRFAM: Ribosomal protein L33~PFAM: Ribosomal protein L33 inference protein motif:TFAM:TIGR01023 db_xref GO:0003735 db_xref InterPro:IPR001705 3858905 3857586 gene locus_tag Alide2_3714 3858905 3857586 CDS product Fmu (Sun) domain protein transl_table 11 protein_id gb|AEB86039.1||gnl|jgi|Alide2_3714 note PFAM: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p~KEGG: aav:Aave_3433 Fmu (Sun) domain-containing protein inference protein motif:PFAM:PF01189 db_xref InterPro:IPR001678 3859602 3859021 gene locus_tag Alide2_3715 3859602 3859021 CDS product phosphoribosylglycinamide formyltransferase EC_number 2.1.2.2 transl_table 11 protein_id gb|AEB86040.1||gnl|jgi|Alide2_3715 note TIGRFAM: Phosphoribosylglycinamide formyltransferase~KEGG: dac:Daci_5372 phosphoribosylglycinamide formyltransferase~PFAM: Formyl transferase, N-terminal inference protein motif:TFAM:TIGR00639 db_xref GO:0004644 db_xref InterPro:IPR002376 db_xref InterPro:IPR004607 3859623 3860312 gene locus_tag Alide2_3716 3859623 3860312 CDS product UPF0502 protein yceH transl_table 11 protein_id gb|AEB86041.1||gnl|jgi|Alide2_3716 note KEGG: ctt:CtCNB1_0874 hypothetical protein~HAMAP: Protein of unknown function DUF480~PFAM: Protein of unknown function DUF480 inference protein motif:HAMAP:MF_01584 db_xref InterPro:IPR007432 3860358 3861539 gene locus_tag Alide2_3717 3860358 3861539 CDS product acyl-CoA dehydrogenase domain-containing protein transl_table 11 protein_id gb|AEB86042.1||gnl|jgi|Alide2_3717 note PFAM: Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain~KEGG: dia:Dtpsy_2731 acyl-CoA dehydrogenase domain protein inference protein motif:PFAM:PF02771 db_xref GO:0003995 db_xref InterPro:IPR006090 db_xref InterPro:IPR006091 db_xref InterPro:IPR006092 3861554 3862669 gene locus_tag Alide2_3718 3861554 3862669 CDS product acyl-CoA dehydrogenase domain-containing protein transl_table 11 protein_id gb|AEB86043.1||gnl|jgi|Alide2_3718 note PFAM: Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, type 1~KEGG: dia:Dtpsy_2732 acyl-CoA dehydrogenase domain protein inference protein motif:PFAM:PF02771 db_xref GO:0003995 db_xref InterPro:IPR006090 db_xref InterPro:IPR006092 3863281 3862724 gene locus_tag Alide2_3719 3863281 3862724 CDS product HNH endonuclease transl_table 11 protein_id gb|AEB86044.1||gnl|jgi|Alide2_3719 note KEGG: dia:Dtpsy_2733 HNH endonuclease~PFAM: HNH endonuclease~SMART: HNH nuclease inference protein motif:PFAM:PF01844 db_xref GO:0003676 db_xref GO:0004519 db_xref InterPro:IPR002711 db_xref InterPro:IPR003615 3863435 3864481 gene locus_tag Alide2_3720 3863435 3864481 CDS product riboflavin biosynthesis protein RibF EC_number 2.7.1.26 EC_number 2.7.7.2 transl_table 11 protein_id gb|AEB86045.1||gnl|jgi|Alide2_3720 note SMART: Riboflavin kinase~TIGRFAM: Riboflavin kinase/FAD synthetase~KEGG: ajs:Ajs_3398 bifunctional riboflavin kinase/FMN adenylyltransferase~PFAM: FAD synthetase; Riboflavin kinase inference protein motif:TFAM:TIGR00083 db_xref GO:0003919 db_xref GO:0008531 db_xref InterPro:IPR002606 db_xref InterPro:IPR015864 db_xref InterPro:IPR015865 3864572 3867427 gene locus_tag Alide2_3721 3864572 3867427 CDS product Isoleucyl-tRNA synthetase EC_number 6.1.1.5 transl_table 11 protein_id gb|AEB86046.1||gnl|jgi|Alide2_3721 note TIGRFAM: Isoleucyl-tRNA synthetase, class Ia~HAMAP: Isoleucyl-tRNA synthetase, class Ia~KEGG: dia:Dtpsy_2735 isoleucyl-tRNA synthetase inference protein motif:HAMAP:MF_02002 db_xref InterPro:IPR002300 db_xref InterPro:IPR002301 db_xref InterPro:IPR010663 db_xref InterPro:IPR013155 3867427 3867924 gene locus_tag Alide2_3722 3867427 3867924 CDS product lipoprotein signal peptidase EC_number 3.4.23.36 transl_table 11 protein_id gb|AEB86047.1||gnl|jgi|Alide2_3722 note TIGRFAM: Peptidase A8, signal peptidase II~KEGG: dia:Dtpsy_2736 lipoprotein signal peptidase~PFAM: Peptidase A8, signal peptidase II inference protein motif:TFAM:TIGR00077 db_xref GO:0004190 db_xref InterPro:IPR001872 3868017 3869039 gene locus_tag Alide2_3723 3868017 3869039 CDS product transcriptional regulator, LacI family transl_table 11 protein_id gb|AEB86048.1||gnl|jgi|Alide2_3723 note KEGG: vap:Vapar_1266 transcriptional regulator, LacI family~PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI~SMART: HTH transcriptional regulator, LacI inference protein motif:PFAM:PF00532 db_xref GO:0003700 db_xref InterPro:IPR000843 db_xref InterPro:IPR001761 3869079 3870092 gene locus_tag Alide2_3724 3869079 3870092 CDS product extracellular solute-binding protein family 1 transl_table 11 protein_id gb|AEB86049.1||gnl|jgi|Alide2_3724 note PFAM: Bacterial extracellular solute-binding, family 1~KEGG: vap:Vapar_1265 extracellular solute-binding protein family 1 inference protein motif:PFAM:PF01547 db_xref GO:0005215 db_xref InterPro:IPR006059 3870089 3870898 gene locus_tag Alide2_3725 3870089 3870898 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB86050.1||gnl|jgi|Alide2_3725 note PFAM: Binding-protein-dependent transport systems inner membrane component~KEGG: vap:Vapar_1264 binding-protein-dependent transport systems inner membrane component inference protein motif:PFAM:PF00528 db_xref GO:0005215 db_xref InterPro:IPR000515 3870924 3871724 gene locus_tag Alide2_3726 3870924 3871724 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB86051.1||gnl|jgi|Alide2_3726 note PFAM: Binding-protein-dependent transport systems inner membrane component~KEGG: vap:Vapar_1263 binding-protein-dependent transport systems inner membrane component inference protein motif:PFAM:PF00528 db_xref GO:0005215 db_xref InterPro:IPR000515 3871714 3872775 gene locus_tag Alide2_3727 3871714 3872775 CDS product Polyamine-transporting ATPase EC_number 3.6.3.31 transl_table 11 protein_id gb|AEB86052.1||gnl|jgi|Alide2_3727 note PFAM: ABC transporter-like; Transport-associated OB, type 2~KEGG: vap:Vapar_1262 ABC transporter related~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.31 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 db_xref InterPro:IPR013611 3872772 3873611 gene locus_tag Alide2_3728 3872772 3873611 CDS product metallophosphoesterase transl_table 11 protein_id gb|AEB86053.1||gnl|jgi|Alide2_3728 note PFAM: Metallo-dependent phosphatase~KEGG: vap:Vapar_1261 metallophosphoesterase inference protein motif:PFAM:PF00149 db_xref GO:0016787 db_xref InterPro:IPR004843 3873634 3875301 gene locus_tag Alide2_3729 3873634 3875301 CDS product Na/Pi-cotransporter II-related protein transl_table 11 protein_id gb|AEB86054.1||gnl|jgi|Alide2_3729 note KEGG: aav:Aave_3461 Na/Pi-cotransporter II-related protein~TIGRFAM: Na/Pi co-transporter II-related~PFAM: Na/Pi-cotransporter; PhoU inference protein motif:TFAM:TIGR00704 db_xref InterPro:IPR003841 db_xref InterPro:IPR004633 db_xref InterPro:IPR008170 3876276 3875311 gene locus_tag Alide2_3730 3876276 3875311 CDS product Bile acid:sodium symporter transl_table 11 protein_id gb|AEB86055.1||gnl|jgi|Alide2_3730 note PFAM: Bile acid:sodium symporter~KEGG: dia:Dtpsy_2738 hypothetical protein inference protein motif:PFAM:PF01758 db_xref GO:0008508 db_xref InterPro:IPR002657 3876382 3877323 gene locus_tag Alide2_3731 3876382 3877323 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB86056.1||gnl|jgi|Alide2_3731 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: dac:Daci_3178 LysR family transcriptional regulator inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 3878095 3877277 gene locus_tag Alide2_3732 3878095 3877277 CDS product NUDIX hydrolase transl_table 11 protein_id gb|AEB86057.1||gnl|jgi|Alide2_3732 note PFAM: NUDIX hydrolase domain~KEGG: ajs:Ajs_3404 NUDIX hydrolase inference protein motif:PFAM:PF00293 db_xref GO:0016787 db_xref InterPro:IPR000086 3879078 3878092 gene locus_tag Alide2_3733 3879078 3878092 CDS product NADPH:quinone reductase EC_number 1.6.5.5 transl_table 11 protein_id gb|AEB86058.1||gnl|jgi|Alide2_3733 note PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like~KEGG: dia:Dtpsy_2740 alcohol dehydrogenase zinc-binding domain protein~SMART: Polyketide synthase, enoylreductase inference protein motif:PRIAM:1.6.5.5 db_xref InterPro:IPR013149 db_xref InterPro:IPR013154 db_xref InterPro:IPR020843 3879184 3880086 gene locus_tag Alide2_3734 3879184 3880086 CDS product protein of unknown function DUF6 transmembrane transl_table 11 protein_id gb|AEB86059.1||gnl|jgi|Alide2_3734 note KEGG: ajs:Ajs_3406 hypothetical protein~manually curated~PFAM: Drug/metabolite transporter inference protein motif:PFAM:PF00892 db_xref InterPro:IPR000620 3882772 3880109 gene locus_tag Alide2_3735 3882772 3880109 CDS product diguanylate cyclase/phosphodiesterase transl_table 11 protein_id gb|AEB86060.1||gnl|jgi|Alide2_3735 note TIGRFAM: Diguanylate cyclase, predicted~PFAM: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted~KEGG: dia:Dtpsy_2742 diguanylate cyclase/phosphodiesterase~SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted inference protein motif:TFAM:TIGR00254 db_xref InterPro:IPR000160 db_xref InterPro:IPR001633 3883836 3882769 gene locus_tag Alide2_3736 3883836 3882769 CDS product Extracellular solute-binding protein, family 7 transl_table 11 protein_id gb|AEB86061.1||gnl|jgi|Alide2_3736 note PFAM: Extracellular solute-binding protein, family 7, bacteria~KEGG: ajs:Ajs_3408 TRAP dicarboxylate transporter-DctP subunit inference protein motif:PFAM:PF03480 db_xref InterPro:IPR018389 3884666 3883836 gene locus_tag Alide2_3737 3884666 3883836 CDS product short-chain dehydrogenase/reductase SDR transl_table 11 protein_id gb|AEB86062.1||gnl|jgi|Alide2_3737 note PFAM: Short-chain dehydrogenase/reductase SDR~KEGG: dia:Dtpsy_2744 short-chain dehydrogenase/reductase SDR inference protein motif:PFAM:PF00106 db_xref GO:0016491 db_xref InterPro:IPR002198 3886379 3884868 gene locus_tag Alide2_3738 3886379 3884868 CDS product protein of unknown function DUF112 transmembrane transl_table 11 protein_id gb|AEB86063.1||gnl|jgi|Alide2_3738 note PFAM: Protein of unknown function DUF112, transmembrane~KEGG: ajs:Ajs_3411 hypothetical protein inference protein motif:PFAM:PF01970 db_xref InterPro:IPR002823 3886884 3886396 gene locus_tag Alide2_3739 3886884 3886396 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86064.1||gnl|jgi|Alide2_3739 note KEGG: dia:Dtpsy_2746 protein of unknown function DUF1468 inference similar to AA sequence:KEGG:Dtpsy_2746 db_xref InterPro:IPR009936 3888781 3887015 gene locus_tag Alide2_3740 3888781 3887015 CDS product type II secretion system protein E transl_table 11 protein_id gb|AEB86065.1||gnl|jgi|Alide2_3740 note KEGG: dia:Dtpsy_2747 type II secretion system protein E~PFAM: Type II secretion system protein E; General secretory system II, protein E, N-terminal~SMART: ATPase, AAA+ type, core inference protein motif:PFAM:PF00437 db_xref GO:0005524 db_xref InterPro:IPR001482 db_xref InterPro:IPR003593 db_xref InterPro:IPR007831 3889547 3888786 gene locus_tag Alide2_3741 3889547 3888786 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86066.1||gnl|jgi|Alide2_3741 note KEGG: dia:Dtpsy_2748 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_2748 3890068 3889544 gene locus_tag Alide2_3742 3890068 3889544 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86067.1||gnl|jgi|Alide2_3742 note KEGG: dia:Dtpsy_2749 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_2749 3890988 3890143 gene locus_tag Alide2_3743 3890988 3890143 CDS product TatD-related deoxyribonuclease transl_table 11 protein_id gb|AEB86068.1||gnl|jgi|Alide2_3743 note PFAM: Deoxyribonuclease, TatD-related~KEGG: ajs:Ajs_3416 TatD-related deoxyribonuclease inference protein motif:PFAM:PF01026 db_xref GO:0016787 db_xref InterPro:IPR001130 3891196 3890999 gene locus_tag Alide2_3744 3891196 3890999 CDS product Protein of unknown function DUF2892 transl_table 11 protein_id gb|AEB86069.1||gnl|jgi|Alide2_3744 note PFAM: Protein of unknown function DUF2892~KEGG: dia:Dtpsy_2751 hypothetical protein inference protein motif:PFAM:PF11127 db_xref InterPro:IPR021309 3891534 3891226 gene locus_tag Alide2_3745 3891534 3891226 CDS product transcriptional regulator, ArsR family transl_table 11 protein_id gb|AEB86070.1||gnl|jgi|Alide2_3745 note KEGG: dia:Dtpsy_2752 transcriptional regulator, TrmB~PFAM: HTH transcriptional regulator, ArsR~SMART: HTH transcriptional regulator, ArsR inference protein motif:PFAM:PF01022 db_xref GO:0003700 db_xref InterPro:IPR001845 3891679 3892041 gene locus_tag Alide2_3746 3891679 3892041 CDS product alkylhydroperoxidase like protein, AhpD family transl_table 11 protein_id gb|AEB86071.1||gnl|jgi|Alide2_3746 note KEGG: dia:Dtpsy_2753 alkylhydroperoxidase like protein, AhpD family~TIGRFAM: Alkylhydroperoxidase AhpD core~PFAM: Carboxymuconolactone decarboxylase inference protein motif:TFAM:TIGR00778 db_xref InterPro:IPR003779 db_xref InterPro:IPR004675 3892146 3893045 gene locus_tag Alide2_3747 3892146 3893045 CDS product peptidase S1 and S6 chymotrypsin/Hap transl_table 11 protein_id gb|AEB86072.1||gnl|jgi|Alide2_3747 note PFAM: Peptidase S1/S6, chymotrypsin/Hap~KEGG: aav:Aave_1064 peptidase S1 and S6, chymotrypsin/Hap inference protein motif:PFAM:PF00089 db_xref GO:0004252 db_xref InterPro:IPR001254 3893060 3894091 gene locus_tag Alide2_3748 3893060 3894091 CDS product ATPase associated with various cellular activities AAA_3 transl_table 11 protein_id gb|AEB86073.1||gnl|jgi|Alide2_3748 note PFAM: ATPase, AAA-3~KEGG: aav:Aave_1063 ATPase inference protein motif:PFAM:PF07726 db_xref GO:0005524 db_xref GO:0016887 db_xref InterPro:IPR011703 3894084 3895052 gene locus_tag Alide2_3749 3894084 3895052 CDS product protein of unknown function DUF58 transl_table 11 protein_id gb|AEB86074.1||gnl|jgi|Alide2_3749 note PFAM: Domain of unknown function DUF58~KEGG: aav:Aave_1062 hypothetical protein inference protein motif:PFAM:PF01882 db_xref InterPro:IPR002881 3895085 3896131 gene locus_tag Alide2_3750 3895085 3896131 CDS product von Willebrand factor type A transl_table 11 protein_id gb|AEB86075.1||gnl|jgi|Alide2_3750 note KEGG: aav:Aave_1061 von Willebrand factor, type A~PFAM: von Willebrand factor, type A~SMART: von Willebrand factor, type A inference protein motif:PFAM:PF00092 db_xref InterPro:IPR002035 3898243 3896246 gene locus_tag Alide2_3751 3898243 3896246 CDS product acetate/CoA ligase EC_number 6.2.1.1 transl_table 11 protein_id gb|AEB86076.1||gnl|jgi|Alide2_3751 note TIGRFAM: Acetate-CoA ligase~KEGG: aav:Aave_1499 acetyl-coenzyme A synthetase~PFAM: AMP-dependent synthetase/ligase inference protein motif:TFAM:TIGR02188 db_xref GO:0003987 db_xref GO:0016208 db_xref InterPro:IPR000873 db_xref InterPro:IPR011904 3898897 3900201 gene locus_tag Alide2_3752 3898897 3900201 CDS product glycine betaine/L-proline ABC transporter, ATPase subunit EC_number 3.6.3.32 transl_table 11 protein_id gb|AEB86077.1||gnl|jgi|Alide2_3752 note SMART: ATPase, AAA+ type, core~TIGRFAM: Glycine betaine/L-proline transport ATP-binding subunit~KEGG: ajs:Ajs_1065 glycine betaine/L-proline ABC transporter, ATPase subunit~PFAM: ABC transporter-like; Cystathionine beta-synthase, core inference protein motif:TFAM:TIGR01186 db_xref GO:0005524 db_xref GO:0015171 db_xref InterPro:IPR000644 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 db_xref InterPro:IPR005892 3900198 3901310 gene locus_tag Alide2_3753 3900198 3901310 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB86078.1||gnl|jgi|Alide2_3753 note PFAM: Binding-protein-dependent transport systems inner membrane component~KEGG: dia:Dtpsy_0980 binding-protein-dependent transport systems inner membrane component inference protein motif:PFAM:PF00528 db_xref GO:0005215 db_xref InterPro:IPR000515 3901386 3902396 gene locus_tag Alide2_3754 3901386 3902396 CDS product ABC-type glycine betaine transport, periplasmic subunit transl_table 11 protein_id gb|AEB86079.1||gnl|jgi|Alide2_3754 note PFAM: ABC-type glycine betaine transport system, substrate-binding domain~KEGG: dia:Dtpsy_0979 glycine betaine transporter periplasmic subunit inference protein motif:PFAM:PF04069 db_xref GO:0005215 db_xref GO:0005488 db_xref InterPro:IPR007210 3902583 3903365 gene locus_tag Alide2_3755 3902583 3903365 CDS product transcriptional regulator, Crp/Fnr family transl_table 11 protein_id gb|AEB86080.1||gnl|jgi|Alide2_3755 note KEGG: dia:Dtpsy_0976 transcriptional regulator, Crp/Fnr family~PFAM: Cyclic nucleotide-binding domain~SMART: Cyclic nucleotide-binding domain inference protein motif:PFAM:PF00027 db_xref InterPro:IPR000595 3904751 3903366 gene locus_tag Alide2_3756 3904751 3903366 CDS product fumarate hydratase, class II EC_number 4.2.1.2 transl_table 11 protein_id gb|AEB86081.1||gnl|jgi|Alide2_3756 note TIGRFAM: Fumarate hydratase, class II~KEGG: aav:Aave_1491 fumarate hydratase~PFAM: Lyase 1, N-terminal; Fumarase C, C-terminal inference protein motif:TFAM:TIGR00979 db_xref GO:0004333 db_xref InterPro:IPR005677 db_xref InterPro:IPR018951 db_xref InterPro:IPR022761 3904920 3906479 gene locus_tag Alide2_3757 3904920 3906479 CDS product hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit transl_table 11 protein_id gb|AEB86082.1||gnl|jgi|Alide2_3757 note KEGG: dac:Daci_2654 tartrate/fumarate subfamily Fe-S type hydro-lyase subunit alpha~TIGRFAM: Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain; Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain~PFAM: Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain; Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain inference protein motif:TFAM:TIGR00722 db_xref GO:0016829 db_xref GO:0016836 db_xref InterPro:IPR004646 db_xref InterPro:IPR004647 3906422 3906838 gene locus_tag Alide2_3758 3906422 3906838 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86083.1||gnl|jgi|Alide2_3758 note KEGG: mno:Mnod_4051 hypothetical protein inference similar to AA sequence:KEGG:Mnod_4051 3908269 3906848 gene locus_tag Alide2_3759 3908269 3906848 CDS product peptidase U62 modulator of DNA gyrase transl_table 11 protein_id gb|AEB86084.1||gnl|jgi|Alide2_3759 note PFAM: Peptidase U62, modulator of DNA gyrase~KEGG: dia:Dtpsy_0971 peptidase U62 modulator of DNA gyrase inference protein motif:PFAM:PF01523 db_xref InterPro:IPR002510 3908352 3909020 gene locus_tag Alide2_3760 3908352 3909020 CDS product Uncharacterized protein family UPF0307 transl_table 11 protein_id gb|AEB86085.1||gnl|jgi|Alide2_3760 note PFAM: Ribosome-associated, YjgA~KEGG: dia:Dtpsy_0970 protein of unknown function DUF615 inference protein motif:PFAM:PF04751 db_xref InterPro:IPR006839 3909017 3909613 gene locus_tag Alide2_3761 3909017 3909613 CDS product molybdenum cofactor synthesis domain protein transl_table 11 protein_id gb|AEB86086.1||gnl|jgi|Alide2_3761 note TIGRFAM: Molybdenum cofactor synthesis~PFAM: Molybdopterin binding~KEGG: ajs:Ajs_1051 molybdopterin adenylyltransferase~SMART: Molybdopterin binding inference protein motif:TFAM:TIGR00177 db_xref InterPro:IPR001453 db_xref InterPro:IPR020817 3909706 3910803 gene locus_tag Alide2_3762 3909706 3910803 CDS product Alcohol dehydrogenase (NADP(+)) EC_number 1.1.1.2 transl_table 11 protein_id gb|AEB86087.1||gnl|jgi|Alide2_3762 note PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like~KEGG: dia:Dtpsy_0967 alcohol dehydrogenase zinc-binding domain protein~SMART: Polyketide synthase, enoylreductase inference protein motif:PRIAM:1.1.1.2 db_xref InterPro:IPR013149 db_xref InterPro:IPR013154 db_xref InterPro:IPR020843 3911481 3910819 gene locus_tag Alide2_3763 3911481 3910819 CDS product nitroreductase transl_table 11 protein_id gb|AEB86088.1||gnl|jgi|Alide2_3763 note PFAM: Nitroreductase-like~KEGG: dia:Dtpsy_0966 nitroreductase inference protein motif:PFAM:PF00881 db_xref GO:0016491 db_xref InterPro:IPR000415 3912339 3911548 gene locus_tag Alide2_3764 3912339 3911548 CDS product serine O-acetyltransferase EC_number 2.3.1.30 transl_table 11 protein_id gb|AEB86089.1||gnl|jgi|Alide2_3764 note KEGG: xtr:100496826 serine acetyltransferase-like~TIGRFAM: Serine O-acetyltransferase inference protein motif:TFAM:TIGR01172 db_xref GO:0009001 db_xref InterPro:IPR001451 db_xref InterPro:IPR005881 3913189 3912377 gene locus_tag Alide2_3765 3913189 3912377 CDS product RNA methyltransferase, TrmH family, group 1 transl_table 11 protein_id gb|AEB86090.1||gnl|jgi|Alide2_3765 note KEGG: ajs:Ajs_1046 RNA methyltransferase~TIGRFAM: RNA methyltransferase TrmH, group 1~PFAM: tRNA/rRNA methyltransferase, SpoU inference protein motif:TFAM:TIGR00050 db_xref GO:0008173 db_xref InterPro:IPR001537 db_xref InterPro:IPR004384 3913319 3914272 gene locus_tag Alide2_3766 3913319 3914272 CDS product Inositol-phosphate phosphatase EC_number 3.1.3.25 transl_table 11 protein_id gb|AEB86091.1||gnl|jgi|Alide2_3766 note KEGG: dia:Dtpsy_0963 inositol-phosphate phosphatase~PFAM: Inositol monophosphatase inference protein motif:PRIAM:3.1.3.25 db_xref InterPro:IPR000760 3914614 3915228 gene locus_tag Alide2_3767 3914614 3915228 CDS product Tripartite ATP-independent periplasmic transporter DctQ component transl_table 11 protein_id gb|AEB86092.1||gnl|jgi|Alide2_3767 note PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component~KEGG: ctt:CtCNB1_3517 tripartite ATP-independent periplasmic protein inference protein motif:PFAM:PF04290 db_xref InterPro:IPR007387 3915247 3917073 gene locus_tag Alide2_3768 3915247 3917073 CDS product TRAP dicarboxylate transporter, DctM subunit transl_table 11 protein_id gb|AEB86093.1||gnl|jgi|Alide2_3768 note KEGG: dia:Dtpsy_0958 TRAP dicarboxylate transporter, DctM subunit~TIGRFAM: TRAP dicarboxylate transporter, DctM subunit~PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit inference protein motif:TFAM:TIGR00786 db_xref InterPro:IPR004681 db_xref InterPro:IPR010656 3917208 3921905 gene locus_tag Alide2_3769 3917208 3921905 CDS product DEAD/H associated domain protein transl_table 11 protein_id gb|AEB86094.1||gnl|jgi|Alide2_3769 note KEGG: gdi:GDI_2676 putative ATP-dependent helicase Lhr~PFAM: DEAD/H associated; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal~SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal inference protein motif:PFAM:PF08494 db_xref GO:0003676 db_xref GO:0004386 db_xref GO:0005524 db_xref GO:0008026 db_xref InterPro:IPR001650 db_xref InterPro:IPR011545 db_xref InterPro:IPR013701 db_xref InterPro:IPR014001 3923067 3921985 gene locus_tag Alide2_3770 3923067 3921985 CDS product Extracellular solute-binding protein, family 7 transl_table 11 protein_id gb|AEB86095.1||gnl|jgi|Alide2_3770 note PFAM: Extracellular solute-binding protein, family 7, bacteria~KEGG: ctt:CtCNB1_3520 twin-arginine translocation pathway signal inference protein motif:PFAM:PF03480 db_xref InterPro:IPR006311 db_xref InterPro:IPR018389 3925087 3923195 gene locus_tag Alide2_3771 3925087 3923195 CDS product deoxyxylulose-5-phosphate synthase EC_number 2.2.1.7 transl_table 11 protein_id gb|AEB86096.1||gnl|jgi|Alide2_3771 note SMART: Transketolase-like, pyrimidine-binding domain~TIGRFAM: Deoxyxylulose-5-phosphate synthase~KEGG: dia:Dtpsy_0956 1-deoxy-D-xylulose-5-phosphate synthase~PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; Dehydrogenase, E1 component inference protein motif:TFAM:TIGR00204 db_xref GO:0008661 db_xref InterPro:IPR001017 db_xref InterPro:IPR005475 db_xref InterPro:IPR005476 db_xref InterPro:IPR005477 3926055 3925162 gene locus_tag Alide2_3772 3926055 3925162 CDS product Polyprenyl synthetase transl_table 11 protein_id gb|AEB86097.1||gnl|jgi|Alide2_3772 note PFAM: Polyprenyl synthetase~KEGG: dia:Dtpsy_0955 polyprenyl synthetase inference protein motif:PFAM:PF00348 db_xref InterPro:IPR000092 3926297 3926055 gene locus_tag Alide2_3773 3926297 3926055 CDS product exodeoxyribonuclease VII, small subunit transl_table 11 protein_id gb|AEB86098.1||gnl|jgi|Alide2_3773 note KEGG: ajs:Ajs_1036 exodeoxyribonuclease VII, small subunit~TIGRFAM: Exonuclease VII, small subunit~PFAM: Exonuclease VII, small subunit inference protein motif:TFAM:TIGR01280 db_xref GO:0008855 db_xref InterPro:IPR003761 3926573 3927712 gene locus_tag Alide2_3774 3926573 3927712 CDS product Rieske (2Fe-2S) iron-sulfur domain protein transl_table 11 protein_id gb|AEB86099.1||gnl|jgi|Alide2_3774 note PFAM: Rieske [2Fe-2S] iron-sulphur domain~KEGG: ajs:Ajs_1035 Rieske (2Fe-2S) domain-containing protein inference protein motif:PFAM:PF00355 db_xref GO:0016491 db_xref InterPro:IPR017941 3927806 3928717 gene locus_tag Alide2_3775 3927806 3928717 CDS product putative transmembrane protein transl_table 11 protein_id gb|AEB86100.1||gnl|jgi|Alide2_3775 note KEGG: dia:Dtpsy_0952 putative transmembrane protein inference similar to AA sequence:KEGG:Dtpsy_0952 3928771 3929670 gene locus_tag Alide2_3776 3928771 3929670 CDS product 3-mercaptopyruvate sulfurtransferase EC_number 2.8.1.2 transl_table 11 protein_id gb|AEB86101.1||gnl|jgi|Alide2_3776 note PFAM: Rhodanese-like~KEGG: ajs:Ajs_1033 3-mercaptopyruvate sulfurtransferase~SMART: Rhodanese-like inference protein motif:PRIAM:2.8.1.2 db_xref InterPro:IPR001763 3931312 3929876 gene locus_tag Alide2_3777 3931312 3929876 CDS product Aldehyde Dehydrogenase transl_table 11 protein_id gb|AEB86102.1||gnl|jgi|Alide2_3777 note PFAM: Aldehyde dehydrogenase domain~KEGG: dia:Dtpsy_0944 aldehyde dehydrogenase inference protein motif:PFAM:PF00171 db_xref GO:0016491 db_xref InterPro:IPR015590 3933940 3931550 gene locus_tag Alide2_3778 3933940 3931550 CDS product DNA internalization-related competence protein ComEC/Rec2 transl_table 11 protein_id gb|AEB86103.1||gnl|jgi|Alide2_3778 note TIGRFAM: Competence protein ComEC/Rec2; ComEC/Rec2-related protein~PFAM: ComEC/Rec2-related protein; Beta-lactamase-like~KEGG: dia:Dtpsy_0933 DNA internalization-related competence protein ComEC/Rec2~SMART: Beta-lactamase-like inference protein motif:TFAM:TIGR00361 db_xref InterPro:IPR001279 db_xref InterPro:IPR004477 db_xref InterPro:IPR004797 3934046 3934504 gene locus_tag Alide2_3779 3934046 3934504 CDS product Endoribonuclease L-PSP transl_table 11 protein_id gb|AEB86104.1||gnl|jgi|Alide2_3779 note PFAM: Endoribonuclease L-PSP~KEGG: ajs:Ajs_1018 endoribonuclease L-PSP inference protein motif:PFAM:PF01042 db_xref InterPro:IPR006175 3936954 3934612 gene locus_tag Alide2_3780 3936954 3934612 CDS product DNA topoisomerase IV, A subunit EC_number 5.99.1.3 transl_table 11 protein_id gb|AEB86105.1||gnl|jgi|Alide2_3780 note SMART: DNA topoisomerase, type IIA, subunit A/C-terminal~TIGRFAM: DNA topoisomerase IV, subunit A, Gram-negative~KEGG: ajs:Ajs_1016 DNA topoisomerase IV subunit A~PFAM: DNA topoisomerase, type IIA, subunit A/C-terminal; DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel inference protein motif:TFAM:TIGR01062 db_xref GO:0003677 db_xref GO:0003918 db_xref GO:0005524 db_xref InterPro:IPR002205 db_xref InterPro:IPR005742 db_xref InterPro:IPR006691 3938986 3937010 gene locus_tag Alide2_3781 3938986 3937010 CDS product DNA topoisomerase (ATP-hydrolyzing) EC_number 5.99.1.3 transl_table 11 protein_id gb|AEB86106.1||gnl|jgi|Alide2_3781 note PFAM: DNA topoisomerase, type IIA, subunit B, domain 2; ATPase-like, ATP-binding domain; DNA topoisomerase, type IIA, subunit B, C-terminal~KEGG: dia:Dtpsy_0928 DNA topoisomerase IV subunit B~SMART: DNA topoisomerase, type IIA, subunit B/N-terminal; ATPase-like, ATP-binding domain inference protein motif:PRIAM:5.99.1.3 db_xref InterPro:IPR001241 db_xref InterPro:IPR002288 db_xref InterPro:IPR003594 db_xref InterPro:IPR013506 3939082 3940299 gene locus_tag Alide2_3782 3939082 3940299 CDS product major facilitator superfamily MFS_1 transl_table 11 protein_id gb|AEB86107.1||gnl|jgi|Alide2_3782 note KEGG: dia:Dtpsy_0927 major facilitator superfamily MFS_1~manually curated~PFAM: Major facilitator superfamily MFS-1 inference protein motif:PFAM:PF07690 db_xref InterPro:IPR011701 3940304 3940432 gene locus_tag Alide2_3783 3940304 3940432 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86108.1||gnl|jgi|Alide2_3783 note KEGG: ajs:Ajs_1012 hypothetical protein inference similar to AA sequence:KEGG:Ajs_1012 3940432 3940962 gene locus_tag Alide2_3784 3940432 3940962 CDS product Methyltransferase type 11 transl_table 11 protein_id gb|AEB86109.1||gnl|jgi|Alide2_3784 note PFAM: Methyltransferase type 11~KEGG: dia:Dtpsy_0925 methyltransferase type 12 inference protein motif:PFAM:PF08241 db_xref GO:0008168 db_xref InterPro:IPR013216 3940971 3941867 gene locus_tag Alide2_3785 3940971 3941867 CDS product Dihydrodipicolinate synthase EC_number 4.2.1.52 transl_table 11 protein_id gb|AEB86110.1||gnl|jgi|Alide2_3785 note PFAM: Dihydrodipicolinate synthetase~TIGRFAM: Dihydrodipicolinate synthase subfamily~HAMAP: Dihydrodipicolinate synthase~KEGG: dia:Dtpsy_0924 dihydrodipicolinate synthase inference protein motif:HAMAP:MF_00418 db_xref InterPro:IPR002220 db_xref InterPro:IPR005263 3941902 3942990 gene locus_tag Alide2_3786 3941902 3942990 CDS product NlpBDapX family lipoprotein transl_table 11 protein_id gb|AEB86111.1||gnl|jgi|Alide2_3786 note PFAM: Lipoprotein, NlpB~KEGG: ajs:Ajs_1009 NlpB/DapX family lipoprotein inference protein motif:PFAM:PF06804 db_xref InterPro:IPR010653 3944053 3943556 gene locus_tag Alide2_3787 3944053 3943556 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86112.1||gnl|jgi|Alide2_3787 note KEGG: dia:Dtpsy_0921 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_0921 3945194 3944070 gene locus_tag Alide2_3788 3945194 3944070 CDS product Cupin, JmjC-type transl_table 11 protein_id gb|AEB86113.1||gnl|jgi|Alide2_3788 note KEGG: dia:Dtpsy_0920 cupin 4 family protein~PFAM: Cupin, JmjC-type~SMART: Transcription factor jumonji/aspartyl beta-hydroxylase inference protein motif:PFAM:PF08007 db_xref InterPro:IPR003347 db_xref InterPro:IPR022777 3945248 3945772 gene locus_tag Alide2_3789 3945248 3945772 CDS product peptidylprolyl isomerase FKBP-type transl_table 11 protein_id gb|AEB86114.1||gnl|jgi|Alide2_3789 note PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type~KEGG: dia:Dtpsy_0919 fkbp-type peptidyl-prolyl cis-trans isomerase inference protein motif:PFAM:PF00254 db_xref InterPro:IPR001179 3946225 3945779 gene locus_tag Alide2_3790 3946225 3945779 CDS product deoxyuridine 5'-triphosphate nucleotidohydrolase Dut EC_number 3.6.1.23 transl_table 11 protein_id gb|AEB86115.1||gnl|jgi|Alide2_3790 note TIGRFAM: DeoxyUTP pyrophosphatase~KEGG: xtr:100496823 deoxyuridine 5'-triphosphate nucleotidohydrolase-like~PFAM: DeoxyUTP pyrophosphatase domain inference protein motif:TFAM:TIGR00576 db_xref GO:0004170 db_xref InterPro:IPR008180 db_xref InterPro:IPR008181 3946695 3946294 gene locus_tag Alide2_3791 3946695 3946294 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86116.1||gnl|jgi|Alide2_3791 inference ab initio prediction:Prodigal:1.4 3947918 3946692 gene locus_tag Alide2_3792 3947918 3946692 CDS product phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase EC_number 6.3.2.5 transl_table 11 protein_id gb|AEB86117.1||gnl|jgi|Alide2_3792 note TIGRFAM: Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase~KEGG: dia:Dtpsy_0916 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase~PFAM: DNA/pantothenate metabolism flavoprotein, C-terminal; Flavoprotein inference protein motif:TFAM:TIGR00521 db_xref GO:0004632 db_xref GO:0004633 db_xref GO:0010181 db_xref InterPro:IPR003382 db_xref InterPro:IPR005252 db_xref InterPro:IPR007085 3947994 3949643 gene locus_tag Alide2_3793 3947994 3949643 CDS product CTP synthase EC_number 6.3.4.2 transl_table 11 protein_id gb|AEB86118.1||gnl|jgi|Alide2_3793 note PFAM: CTP synthase, N-terminal; Glutamine amidotransferase class-I, C-terminal~TIGRFAM: CTP synthase~HAMAP: CTP synthase~KEGG: dia:Dtpsy_0915 CTP synthetase inference protein motif:HAMAP:MF_01227 db_xref InterPro:IPR000991 db_xref InterPro:IPR004468 db_xref InterPro:IPR017456 3949649 3950506 gene locus_tag Alide2_3794 3949649 3950506 CDS product 2-dehydro-3-deoxyphosphooctonate aldolase EC_number 2.5.1.55 transl_table 11 protein_id gb|AEB86119.1||gnl|jgi|Alide2_3794 note TIGRFAM: 3-deoxy-8-phosphooctulonate synthase~KEGG: dac:Daci_5106 2-dehydro-3-deoxyphosphooctonate aldolase~PFAM: DAHP synthetase I/KDSA inference protein motif:TFAM:TIGR01362 db_xref GO:0008676 db_xref InterPro:IPR006218 db_xref InterPro:IPR006269 3950509 3950799 gene locus_tag Alide2_3795 3950509 3950799 CDS product protein of unknown function DUF1330 transl_table 11 protein_id gb|AEB86120.1||gnl|jgi|Alide2_3795 note PFAM: Protein of unknown function DUF1330~KEGG: dac:Daci_5107 hypothetical protein inference protein motif:PFAM:PF07045 db_xref InterPro:IPR010753 3950982 3952268 gene locus_tag Alide2_3796 3950982 3952268 CDS product enolase EC_number 4.2.1.11 transl_table 11 protein_id gb|AEB86121.1||gnl|jgi|Alide2_3796 note TIGRFAM: Enolase~KEGG: xtr:100496359 enolase-like~PFAM: Enolase, C-terminal; Enolase, N-terminal inference protein motif:TFAM:TIGR01060 db_xref GO:0000287 db_xref GO:0004634 db_xref InterPro:IPR000941 db_xref InterPro:IPR020810 db_xref InterPro:IPR020811 3952296 3952583 gene locus_tag Alide2_3797 3952296 3952583 CDS product Septum formation initiator transl_table 11 protein_id gb|AEB86122.1||gnl|jgi|Alide2_3797 note PFAM: Septum formation initiator~KEGG: dia:Dtpsy_0911 septum formation initiator inference protein motif:PFAM:PF04977 db_xref InterPro:IPR007060 3953432 3952653 gene locus_tag Alide2_3798 3953432 3952653 CDS product Sulfate-transporting ATPase EC_number 3.6.3.25 transl_table 11 protein_id gb|AEB86123.1||gnl|jgi|Alide2_3798 note PFAM: ABC transporter-like~KEGG: rfr:Rfer_1521 ABC transporter related~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.25 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 3954156 3953443 gene locus_tag Alide2_3799 3954156 3953443 CDS product polar amino acid ABC transporter, inner membrane subunit transl_table 11 protein_id gb|AEB86124.1||gnl|jgi|Alide2_3799 note KEGG: rfr:Rfer_1523 amino acid ABC transporter permease~TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family~PFAM: Binding-protein-dependent transport systems inner membrane component inference protein motif:TFAM:TIGR01726 db_xref GO:0005215 db_xref InterPro:IPR000515 db_xref InterPro:IPR010065 3954842 3954153 gene locus_tag Alide2_3800 3954842 3954153 CDS product polar amino acid ABC transporter, inner membrane subunit transl_table 11 protein_id gb|AEB86125.1||gnl|jgi|Alide2_3800 note KEGG: rfr:Rfer_1524 amino acid ABC transporter permease~TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family~PFAM: Binding-protein-dependent transport systems inner membrane component inference protein motif:TFAM:TIGR01726 db_xref GO:0005215 db_xref InterPro:IPR000515 db_xref InterPro:IPR010065 3955634 3954873 gene locus_tag Alide2_3801 3955634 3954873 CDS product ABC-type transporter, periplasmic subunit family 3 transl_table 11 protein_id gb|AEB86126.1||gnl|jgi|Alide2_3801 note KEGG: xtr:100498246 histidine-binding periplasmic protein-like~PFAM: Extracellular solute-binding protein, family 3~SMART: Extracellular solute-binding protein, family 3 inference protein motif:PFAM:PF00497 db_xref GO:0005215 db_xref InterPro:IPR001638 3956685 3955699 gene locus_tag Alide2_3802 3956685 3955699 CDS product Hsp33 protein transl_table 11 protein_id gb|AEB86127.1||gnl|jgi|Alide2_3802 note PFAM: Heat shock protein Hsp33 protein~KEGG: ajs:Ajs_0994 HSP33 protein inference protein motif:PFAM:PF01430 db_xref GO:0051082 db_xref InterPro:IPR000397 3957219 3956695 gene locus_tag Alide2_3803 3957219 3956695 CDS product transferase hexapeptide protein transl_table 11 protein_id gb|AEB86128.1||gnl|jgi|Alide2_3803 note KEGG: ajs:Ajs_0993 transferase hexapeptide protein inference similar to AA sequence:KEGG:Ajs_0993 db_xref InterPro:IPR001451 3957269 3958075 gene locus_tag Alide2_3804 3957269 3958075 CDS product protein of unknown function DUF455 transl_table 11 protein_id gb|AEB86129.1||gnl|jgi|Alide2_3804 note KEGG: dia:Dtpsy_0907 protein of unknown function DUF455~manually curated~PFAM: Protein of unknown function DUF455 inference protein motif:PFAM:PF04305 db_xref InterPro:IPR007402 3958164 3959432 gene locus_tag Alide2_3805 3958164 3959432 CDS product diguanylate phosphodiesterase metal dependent hydrolase domain protein transl_table 11 protein_id gb|AEB86130.1||gnl|jgi|Alide2_3805 note KEGG: dia:Dtpsy_0906 diguanylate phosphodiesterase~PFAM: Diguanylate phosphodiesterase, EAL domain; Metal-dependent hydrolase HDOD~SMART: Diguanylate phosphodiesterase, EAL domain inference protein motif:PFAM:PF00563 db_xref InterPro:IPR001633 db_xref InterPro:IPR013976 3959470 3960756 gene locus_tag Alide2_3806 3959470 3960756 CDS product diguanylate phosphodiesterase metal dependent hydrolase domain protein transl_table 11 protein_id gb|AEB86131.1||gnl|jgi|Alide2_3806 note KEGG: dia:Dtpsy_0905 diguanylate phosphodiesterase~PFAM: Diguanylate phosphodiesterase, EAL domain; Metal-dependent hydrolase HDOD~SMART: Diguanylate phosphodiesterase, EAL domain inference protein motif:PFAM:PF00563 db_xref InterPro:IPR001633 db_xref InterPro:IPR013976 3961759 3960776 gene locus_tag Alide2_3807 3961759 3960776 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86132.1||gnl|jgi|Alide2_3807 note KEGG: ajs:Ajs_0989 hypothetical protein inference similar to AA sequence:KEGG:Ajs_0989 db_xref InterPro:IPR005064 3962031 3963092 gene locus_tag Alide2_3808 3962031 3963092 CDS product PAS sensor protein transl_table 11 protein_id gb|AEB86133.1||gnl|jgi|Alide2_3808 note KEGG: ctt:CtCNB1_2005 methyl-accepting chemotaxis sensory transducer~TIGRFAM: PAS~PFAM: PAS fold-3 inference protein motif:TFAM:TIGR00229 db_xref GO:0004871 db_xref InterPro:IPR000014 db_xref InterPro:IPR013655 3963496 3964194 gene locus_tag Alide2_3809 3963496 3964194 CDS product transcriptional regulator, HxlR family transl_table 11 protein_id gb|AEB86134.1||gnl|jgi|Alide2_3809 note PFAM: Helix-turn-helix, HxlR type~KEGG: mlo:mlr1855 hypothetical protein inference protein motif:PFAM:PF01638 db_xref InterPro:IPR002577 3964745 3964197 gene locus_tag Alide2_3810 3964745 3964197 CDS product crossover junction endodeoxyribonuclease RuvC EC_number 3.1.22.4 transl_table 11 protein_id gb|AEB86135.1||gnl|jgi|Alide2_3810 note TIGRFAM: Crossover junction endodeoxyribonuclease RuvC~KEGG: dia:Dtpsy_2968 Holliday junction resolvase~PFAM: Crossover junction endodeoxyribonuclease RuvC inference protein motif:TFAM:TIGR00228 db_xref GO:0004520 db_xref InterPro:IPR002176 3965098 3965364 gene locus_tag Alide2_3811 3965098 3965364 CDS product transposase IS3/IS911 family protein transl_table 11 protein_id gb|AEB86136.1||gnl|jgi|Alide2_3811 note PFAM: Transposase IS3/IS911family~KEGG: ctt:CtCNB1_1899 transposase IS3/IS911 inference protein motif:PFAM:PF01527 db_xref GO:0003677 db_xref GO:0004803 db_xref InterPro:IPR002514 3965382 3966194 gene locus_tag Alide2_3812 3965382 3966194 CDS product Integrase catalytic region transl_table 11 protein_id gb|AEB86137.1||gnl|jgi|Alide2_3812 note PFAM: Integrase, catalytic core~KEGG: ajs:Ajs_3784 integrase catalytic subunit inference protein motif:PFAM:PF00665 db_xref GO:0003677 db_xref InterPro:IPR001584 3966674 3966348 gene locus_tag Alide2_3813 3966674 3966348 CDS product hemagglutinin-related protein transl_table 11 protein_id gb|AEB86138.1||gnl|jgi|Alide2_3813 note KEGG: rso:RSc1775 hemagglutinin-related protein inference similar to AA sequence:KEGG:RSc1775 3967414 3966698 gene locus_tag Alide2_3814 3967414 3966698 CDS product Monofunctional biosynthetic peptidoglycan transglycosylase transl_table 11 protein_id gb|AEB86139.1||gnl|jgi|Alide2_3814 note TIGRFAM: Monofunctional biosynthetic peptidoglycan transglycosylase~HAMAP: Monofunctional biosynthetic peptidoglycan transglycosylase~KEGG: ajs:Ajs_3657 monofunctional biosynthetic peptidoglycan transglycosylase~PFAM: Glycosyl transferase, family 51 inference protein motif:HAMAP:MF_00766 db_xref InterPro:IPR001264 db_xref InterPro:IPR011812 3968276 3967428 gene locus_tag Alide2_3815 3968276 3967428 CDS product shikimate 5-dehydrogenase transl_table 11 protein_id gb|AEB86140.1||gnl|jgi|Alide2_3815 note KEGG: ajs:Ajs_3656 shikimate 5-dehydrogenase~TIGRFAM: Shikimate dehydrogenase~PFAM: Shikimate dehydrogenase substrate binding, N-terminal; Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase inference protein motif:TFAM:TIGR00507 db_xref GO:0004764 db_xref GO:0050661 db_xref InterPro:IPR006151 db_xref InterPro:IPR011342 db_xref InterPro:IPR013708 3969143 3968283 gene locus_tag Alide2_3816 3969143 3968283 CDS product TonB family protein transl_table 11 protein_id gb|AEB86141.1||gnl|jgi|Alide2_3816 note TIGRFAM: TonB, C-terminal~KEGG: ajs:Ajs_3655 TonB family protein inference protein motif:TFAM:TIGR01352 db_xref GO:0008565 db_xref InterPro:IPR006260 3971231 3969153 gene locus_tag Alide2_3817 3971231 3969153 CDS product ribonuclease II transl_table 11 protein_id gb|AEB86142.1||gnl|jgi|Alide2_3817 note KEGG: ajs:Ajs_3654 ribonuclease II~PFAM: Ribonuclease II/R~SMART: Ribonuclease II/R inference protein motif:PFAM:PF00773 db_xref GO:0003723 db_xref GO:0004540 db_xref InterPro:IPR001900 3971355 3972098 gene locus_tag Alide2_3818 3971355 3972098 CDS product RNA polymerase, sigma-24 subunit, ECF subfamily transl_table 11 protein_id gb|AEB86143.1||gnl|jgi|Alide2_3818 note KEGG: dia:Dtpsy_2963 RNA polymerase, sigma-24 subunit, ECF subfamily~TIGRFAM: RNA polymerase sigma-70~PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2 inference protein motif:TFAM:TIGR02937 db_xref GO:0003677 db_xref GO:0003700 db_xref GO:0016987 db_xref InterPro:IPR007627 db_xref InterPro:IPR013249 db_xref InterPro:IPR014284 3972187 3972768 gene locus_tag Alide2_3819 3972187 3972768 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86144.1||gnl|jgi|Alide2_3819 note KEGG: ajs:Ajs_3652 hypothetical protein inference similar to AA sequence:KEGG:Ajs_3652 3972765 3973178 gene locus_tag Alide2_3820 3972765 3973178 CDS product cytochrome c class I transl_table 11 protein_id gb|AEB86145.1||gnl|jgi|Alide2_3820 note PFAM: Cytochrome c, class I~KEGG: dia:Dtpsy_2961 cytochrome c class I inference protein motif:PFAM:PF00034 db_xref GO:0005506 db_xref GO:0009055 db_xref GO:0020037 db_xref InterPro:IPR003088 3973328 3974887 gene locus_tag Alide2_3821 3973328 3974887 CDS product O-antigen polymerase transl_table 11 protein_id gb|AEB86146.1||gnl|jgi|Alide2_3821 note PFAM: O-antigen ligase-related~KEGG: dia:Dtpsy_2960 O-antigen polymerase inference protein motif:PFAM:PF04932 db_xref InterPro:IPR007016 3975577 3974990 gene locus_tag Alide2_3822 3975577 3974990 CDS product protein of unknown function UPF0227 transl_table 11 protein_id gb|AEB86147.1||gnl|jgi|Alide2_3822 note PFAM: Uncharacterised protein family UPF0227/Esterase YqiA~KEGG: ajs:Ajs_3649 hypothetical protein inference protein motif:PFAM:PF05728 db_xref InterPro:IPR008886 3975613 3976794 gene locus_tag Alide2_3823 3975613 3976794 CDS product rod shape-determining protein RodA transl_table 11 protein_id gb|AEB86148.1||gnl|jgi|Alide2_3823 note KEGG: dia:Dtpsy_2957 rod shape-determining protein RodA~TIGRFAM: Rod shape-determining protein RodA~PFAM: Cell cycle protein inference protein motif:TFAM:TIGR02210 db_xref InterPro:IPR001182 db_xref InterPro:IPR011923 3976833 3978293 gene locus_tag Alide2_3824 3976833 3978293 CDS product peptidase U62 modulator of DNA gyrase transl_table 11 protein_id gb|AEB86149.1||gnl|jgi|Alide2_3824 note PFAM: Peptidase U62, modulator of DNA gyrase~KEGG: dia:Dtpsy_2956 peptidase U62 modulator of DNA gyrase inference protein motif:PFAM:PF01523 db_xref InterPro:IPR002510 3978535 3979653 gene locus_tag Alide2_3825 3978535 3979653 CDS product phospho-2-dehydro-3-deoxyheptonate aldolase EC_number 2.5.1.54 transl_table 11 protein_id gb|AEB86150.1||gnl|jgi|Alide2_3825 note TIGRFAM: DHAP synthase, class 1~KEGG: dia:Dtpsy_2954 phospho-2-dehydro-3-deoxyheptonate aldolase~PFAM: DAHP synthetase I/KDSA inference protein motif:TFAM:TIGR00034 db_xref GO:0003849 db_xref InterPro:IPR006218 db_xref InterPro:IPR006219 3979739 3980050 gene locus_tag Alide2_3826 3979739 3980050 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86151.1||gnl|jgi|Alide2_3826 note KEGG: dia:Dtpsy_2953 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_2953 3981540 3980098 gene locus_tag Alide2_3827 3981540 3980098 CDS product UDP-N-acetylmuramate EC_number 6.3.2.8 transl_table 11 protein_id gb|AEB86152.1||gnl|jgi|Alide2_3827 note TIGRFAM: Murein peptide ligase~KEGG: ajs:Ajs_3642 UDP-N-acetylmuramate~PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal inference protein motif:TFAM:TIGR01081 db_xref GO:0016874 db_xref InterPro:IPR000713 db_xref InterPro:IPR004101 db_xref InterPro:IPR005757 db_xref InterPro:IPR013221 3981584 3982219 gene locus_tag Alide2_3828 3981584 3982219 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86153.1||gnl|jgi|Alide2_3828 note KEGG: ajs:Ajs_3641 hypothetical protein inference similar to AA sequence:KEGG:Ajs_3641 3982216 3982791 gene locus_tag Alide2_3829 3982216 3982791 CDS product Redoxin domain protein transl_table 11 protein_id gb|AEB86154.1||gnl|jgi|Alide2_3829 note PFAM: Redoxin~KEGG: dia:Dtpsy_2950 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen inference protein motif:PFAM:PF08534 db_xref GO:0016491 db_xref InterPro:IPR013740 3982902 3983360 gene locus_tag Alide2_3830 3982902 3983360 CDS product acetyl-CoA carboxylase, biotin carboxyl carrier protein transl_table 11 protein_id gb|AEB86155.1||gnl|jgi|Alide2_3830 note KEGG: dia:Dtpsy_2949 acetyl-CoA carboxylase, biotin carboxyl carrier protein~TIGRFAM: Acetyl-CoA biotin carboxyl carrier~PFAM: Biotin/lipoyl attachment inference protein motif:TFAM:TIGR00531 db_xref GO:0003989 db_xref InterPro:IPR000089 db_xref InterPro:IPR001249 3983376 3984725 gene locus_tag Alide2_3831 3983376 3984725 CDS product acetyl-CoA carboxylase, biotin carboxylase EC_number 6.3.4.14 transl_table 11 protein_id gb|AEB86156.1||gnl|jgi|Alide2_3831 note SMART: Biotin carboxylase, C-terminal~TIGRFAM: Acetyl-CoA carboxylase, biotin carboxylase~KEGG: ajs:Ajs_3638 acetyl-CoA carboxylase, biotin carboxylase~PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Biotin carboxylase, C-terminal; Carbamoyl-phosphate synthase, large subunit, N-terminal inference protein motif:TFAM:TIGR00514 db_xref GO:0016874 db_xref InterPro:IPR004549 db_xref InterPro:IPR005479 db_xref InterPro:IPR005481 db_xref InterPro:IPR005482 3984818 3985714 gene locus_tag Alide2_3832 3984818 3985714 CDS product Ribosomal protein L11 methyltransferase transl_table 11 protein_id gb|AEB86157.1||gnl|jgi|Alide2_3832 note TIGRFAM: Ribosomal protein L11 methyltransferase~HAMAP: Ribosomal protein L11 methyltransferase~KEGG: ajs:Ajs_3637 ribosomal protein L11 methyltransferase~PFAM: Ribosomal L11 methyltransferase, PrmA inference protein motif:HAMAP:MF_00735 db_xref InterPro:IPR004498 db_xref InterPro:IPR010456 3985768 3986922 gene locus_tag Alide2_3833 3985768 3986922 CDS product MJ0042 family finger-like protein transl_table 11 protein_id gb|AEB86158.1||gnl|jgi|Alide2_3833 note KEGG: dia:Dtpsy_2946 MJ0042 family finger-like protein~TIGRFAM: Zinc finger/thioredoxin putative~PFAM: Protein of unknown function DUF3426 inference protein motif:TFAM:TIGR02098 db_xref InterPro:IPR011723 db_xref InterPro:IPR021834 3986957 3987859 gene locus_tag Alide2_3834 3986957 3987859 CDS product Adenosine kinase EC_number 2.7.1.20 transl_table 11 protein_id gb|AEB86159.1||gnl|jgi|Alide2_3834 note KEGG: dia:Dtpsy_2945 PfkB domain protein~PFAM: Carbohydrate/purine kinase inference protein motif:PRIAM:2.7.1.20 db_xref InterPro:IPR011611 3988490 3987942 gene locus_tag Alide2_3835 3988490 3987942 CDS product histone protein transl_table 11 protein_id gb|AEB86160.1||gnl|jgi|Alide2_3835 note KEGG: dia:Dtpsy_2944 histone protein inference similar to AA sequence:KEGG:Dtpsy_2944 3989860 3988670 gene locus_tag Alide2_3836 3989860 3988670 CDS product Ribonucleoside-diphosphate reductase EC_number 1.17.4.1 transl_table 11 protein_id gb|AEB86161.1||gnl|jgi|Alide2_3836 note KEGG: dia:Dtpsy_2943 ribonucleotide-diphosphate reductase subunit beta~PFAM: Ribonucleotide reductase inference protein motif:PRIAM:1.17.4.1 db_xref InterPro:IPR000358 3992911 3989999 gene locus_tag Alide2_3837 3992911 3989999 CDS product ribonucleoside-diphosphate reductase, alpha subunit transl_table 11 protein_id gb|AEB86162.1||gnl|jgi|Alide2_3837 note KEGG: ajs:Ajs_3632 ribonucleotide-diphosphate reductase subunit alpha~TIGRFAM: Ribonucleoside-diphosphate reductase, alpha subunit~PFAM: Ribonucleotide reductase large subunit, C-terminal; Ribonucleotide reductase large subunit, N-terminal; ATP-cone inference protein motif:TFAM:TIGR02506 db_xref InterPro:IPR000788 db_xref InterPro:IPR005144 db_xref InterPro:IPR013346 db_xref InterPro:IPR013509 3993777 3993196 gene locus_tag Alide2_3838 3993777 3993196 CDS product N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD transl_table 11 protein_id gb|AEB86163.1||gnl|jgi|Alide2_3838 note KEGG: dia:Dtpsy_2941 N-acetyl-anhydromuranmyl-L-alanine amidase~PFAM: N-acetylmuramoyl-L-alanine amidase, family 2~SMART: N-acetylmuramoyl-L-alanine amidase, family 2 inference protein motif:PFAM:PF01510 db_xref GO:0008745 db_xref InterPro:IPR002502 3995251 3993761 gene locus_tag Alide2_3839 3995251 3993761 CDS product two component, sigma54 specific, transcriptional regulator, Fis family transl_table 11 protein_id gb|AEB86164.1||gnl|jgi|Alide2_3839 note KEGG: dia:Dtpsy_2940 two component, sigma54 specific, transcriptional regulator, fis family~PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver domain; Helix-turn-helix, Fis-type~SMART: Signal transduction response regulator, receiver domain; ATPase, AAA+ type, core inference protein motif:PFAM:PF00158 db_xref GO:0000156 db_xref GO:0003700 db_xref GO:0005524 db_xref GO:0008134 db_xref InterPro:IPR001789 db_xref InterPro:IPR002078 db_xref InterPro:IPR002197 db_xref InterPro:IPR003593 3996971 3995268 gene locus_tag Alide2_3840 3996971 3995268 CDS product integral membrane sensor signal transduction histidine kinase transl_table 11 protein_id gb|AEB86165.1||gnl|jgi|Alide2_3840 note KEGG: dia:Dtpsy_2939 histidine kinase~PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain~SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain inference protein motif:PFAM:PF02518 db_xref GO:0000155 db_xref GO:0005524 db_xref InterPro:IPR003594 db_xref InterPro:IPR003661 3997211 3996984 gene locus_tag Alide2_3841 3997211 3996984 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86166.1||gnl|jgi|Alide2_3841 note KEGG: dia:Dtpsy_2938 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_2938 3998005 3997208 gene locus_tag Alide2_3842 3998005 3997208 CDS product cytochrome c assembly protein transl_table 11 protein_id gb|AEB86167.1||gnl|jgi|Alide2_3842 note PFAM: Cytochrome c assembly protein~KEGG: dia:Dtpsy_2937 cytochrome c assembly protein inference protein motif:PFAM:PF01578 db_xref InterPro:IPR002541 3998095 3999474 gene locus_tag Alide2_3843 3998095 3999474 CDS product signal recognition particle protein transl_table 11 protein_id gb|AEB86168.1||gnl|jgi|Alide2_3843 note TIGRFAM: Signal recognition particle, SRP~PFAM: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; Signal recognition particle, SRP54 subunit, M-domain~KEGG: ajs:Ajs_3626 signal recognition particle subunit FFH/SRP54 (SRP54)~SMART: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; ATPase, AAA+ type, core inference protein motif:TFAM:TIGR00959 db_xref GO:0008312 db_xref InterPro:IPR000897 db_xref InterPro:IPR003593 db_xref InterPro:IPR004125 db_xref InterPro:IPR004780 db_xref InterPro:IPR013822 4000868 3999519 gene locus_tag Alide2_3844 4000868 3999519 CDS product RNA modification enzyme, MiaB family transl_table 11 protein_id gb|AEB86169.1||gnl|jgi|Alide2_3844 note TIGRFAM: Methylthiotransferase; tRNA-i(6)A37 modification enzyme MiaB~PFAM: Radical SAM; Methylthiotransferase, N-terminal; Deoxyribonuclease/rho motif-related TRAM~KEGG: dia:Dtpsy_2935 (dimethylallyl)adenosine tRNA methylthiotransferase~SMART: Elongator protein 3/MiaB/NifB inference protein motif:TFAM:TIGR00089 db_xref GO:0003824 db_xref GO:0016740 db_xref InterPro:IPR002792 db_xref InterPro:IPR005839 db_xref InterPro:IPR006463 db_xref InterPro:IPR006638 db_xref InterPro:IPR007197 db_xref InterPro:IPR013848 4001337 4000936 gene locus_tag Alide2_3845 4001337 4000936 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86170.1||gnl|jgi|Alide2_3845 note KEGG: aav:Aave_0876 hypothetical protein inference similar to AA sequence:KEGG:Aave_0876 4001494 4001418 gene locus_tag Alide2_R0052 note tRNA-Met3 4001494 4001418 tRNA product tRNA-Met 4002299 4001521 gene locus_tag Alide2_3846 pseudo 4004138 4002357 gene locus_tag Alide2_3847 4004138 4002357 CDS product peptidase M61 domain protein transl_table 11 protein_id gb|AEB86171.1||gnl|jgi|Alide2_3847 note PFAM: Peptidase M61~KEGG: ajs:Ajs_3622 peptidase M61 domain-containing protein inference protein motif:PFAM:PF05299 db_xref InterPro:IPR007963 4005002 4004283 gene locus_tag Alide2_3848 4005002 4004283 CDS product disulfide bond isomerase, DsbC/G transl_table 11 protein_id gb|AEB86172.1||gnl|jgi|Alide2_3848 note PFAM: Disulphide bond isomerase, DsbC/G, N-terminal~KEGG: ajs:Ajs_3621 thiol:disulfide interchange protein DsbC inference protein motif:PFAM:PF10411 db_xref InterPro:IPR018950 4006176 4005046 gene locus_tag Alide2_3849 4006176 4005046 CDS product Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family transl_table 11 protein_id gb|AEB86173.1||gnl|jgi|Alide2_3849 note KEGG: ajs:Ajs_3620 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase~TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6~PFAM: Monooxygenase, FAD-binding; FAD dependent oxidoreductase inference protein motif:TFAM:TIGR01988 db_xref GO:0008312 db_xref GO:0050660 db_xref InterPro:IPR002938 db_xref InterPro:IPR006076 db_xref InterPro:IPR010971 4006318 4007412 gene locus_tag Alide2_3850 4006318 4007412 CDS product GTP-binding protein YchF transl_table 11 protein_id gb|AEB86174.1||gnl|jgi|Alide2_3850 note KEGG: dia:Dtpsy_2928 GTP-binding protein YchF~TIGRFAM: Conserved hypothetical protein CHP00092~PFAM: Domain of unknown function DUF933; GTP-binding protein, HSR1-related inference protein motif:TFAM:TIGR00092 db_xref GO:0005525 db_xref InterPro:IPR002917 db_xref InterPro:IPR004396 db_xref InterPro:IPR013029 4007631 4007843 gene locus_tag Alide2_3851 4007631 4007843 CDS product integrase transl_table 11 protein_id gb|AEB86175.1||gnl|jgi|Alide2_3851 note KEGG: pap:PSPA7_5324 integrase inference similar to AA sequence:KEGG:PSPA7_5324 4007909 4008175 gene locus_tag Alide2_3852 4007909 4008175 CDS product transposase IS3/IS911 family protein transl_table 11 protein_id gb|AEB86176.1||gnl|jgi|Alide2_3852 note PFAM: Transposase IS3/IS911family~KEGG: pna:Pnap_4650 transposase IS3/IS911 family protein inference protein motif:PFAM:PF01527 db_xref GO:0003677 db_xref GO:0004803 db_xref InterPro:IPR002514 4008208 4008450 gene locus_tag Alide2_3853 4008208 4008450 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86177.1||gnl|jgi|Alide2_3853 note KEGG: pna:Pnap_4649 IS1477 transposase inference similar to AA sequence:KEGG:Pnap_4649 4008505 4008933 gene locus_tag Alide2_3854 4008505 4008933 CDS product transposase IS3/IS911 family protein transl_table 11 protein_id gb|AEB86178.1||gnl|jgi|Alide2_3854 note PFAM: Transposase IS3/IS911family~KEGG: rfr:Rfer_2709 transposase IS3/IS911 inference protein motif:PFAM:PF01527 db_xref GO:0003677 db_xref GO:0004803 db_xref InterPro:IPR002514 4008930 4009262 gene locus_tag Alide2_3855 4008930 4009262 CDS product IS66 Orf2 family protein transl_table 11 protein_id gb|AEB86179.1||gnl|jgi|Alide2_3855 note PFAM: Transposase (putative), IS66 Orf2-like~KEGG: rfr:Rfer_2710 IS66 Orf2 like inference protein motif:PFAM:PF05717 db_xref InterPro:IPR008878 4009345 4010859 gene locus_tag Alide2_3856 4009345 4010859 CDS product transposase IS66 transl_table 11 protein_id gb|AEB86180.1||gnl|jgi|Alide2_3856 note PFAM: Transposase, IS66~KEGG: dia:Dtpsy_2523 transposase IS66 inference protein motif:PFAM:PF03050 db_xref InterPro:IPR004291 4011499 4010906 gene locus_tag Alide2_3857 pseudo 4013018 4011492 gene locus_tag Alide2_3858 4013018 4011492 CDS product integrase catalytic subunit transl_table 11 protein_id gb|AEB86181.1||gnl|jgi|Alide2_3858 note KEGG: bvi:Bcep1808_2622 integrase catalytic subunit inference similar to AA sequence:KEGG:Bcep1808_2622 4013090 4013341 gene locus_tag Alide2_3859 pseudo 4013366 4015165 gene locus_tag Alide2_3860 4013366 4015165 CDS product Butyryl-CoA dehydrogenase EC_number 1.3.8.1 transl_table 11 protein_id gb|AEB86182.1||gnl|jgi|Alide2_3860 note KEGG: dar:Daro_1555 acyl-CoA dehydrogenase, C-terminal:acyl-CoA dehydrogenase, central region~PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal inference protein motif:PRIAM:1.3.99.2 db_xref InterPro:IPR006090 db_xref InterPro:IPR006091 db_xref InterPro:IPR006092 4016091 4015456 gene locus_tag Alide2_3861 4016091 4015456 CDS product DSBA oxidoreductase transl_table 11 protein_id gb|AEB86183.1||gnl|jgi|Alide2_3861 note PFAM: DSBA-like thioredoxin domain~KEGG: bpl:BURPS1106A_A3104 thioredoxin domain-containing protein inference protein motif:PFAM:PF01323 db_xref GO:0015035 db_xref InterPro:IPR001853 4017341 4016088 gene locus_tag Alide2_3862 4017341 4016088 CDS product major facilitator superfamily MFS_1 transl_table 11 protein_id gb|AEB86184.1||gnl|jgi|Alide2_3862 note KEGG: app:CAP2UW1_0749 drug resistance transporter, Bcr/CflA subfamily~manually curated~PFAM: Major facilitator superfamily MFS-1 inference protein motif:PFAM:PF07690 db_xref InterPro:IPR011701 4017895 4017341 gene locus_tag Alide2_3863 4017895 4017341 CDS product protein of unknown function DUF1234 transl_table 11 protein_id gb|AEB86185.1||gnl|jgi|Alide2_3863 note PFAM: Protein of unknown function DUF1234~KEGG: bge:BC1002_3447 protein of unknown function DUF1234 inference protein motif:PFAM:PF06821 db_xref InterPro:IPR010662 4019224 4017920 gene locus_tag Alide2_3864 4019224 4017920 CDS product major facilitator superfamily MFS_1 transl_table 11 protein_id gb|AEB86186.1||gnl|jgi|Alide2_3864 note PFAM: Major facilitator superfamily MFS-1~KEGG: bph:Bphy_7178 major facilitator transporter inference protein motif:PFAM:PF07690 db_xref InterPro:IPR011701 4020390 4019329 gene locus_tag Alide2_3865 4020390 4019329 CDS product protein of unknown function DUF849 transl_table 11 protein_id gb|AEB86187.1||gnl|jgi|Alide2_3865 note PFAM: Protein of unknown function DUF849, prokaryotic~KEGG: reu:Reut_A0020 hypothetical protein inference protein motif:PFAM:PF05853 db_xref InterPro:IPR008567 4021330 4020473 gene locus_tag Alide2_3866 4021330 4020473 CDS product Taurine dioxygenase EC_number 1.14.11.17 transl_table 11 protein_id gb|AEB86188.1||gnl|jgi|Alide2_3866 note KEGG: bph:Bphy_7176 taurine dioxygenase~PFAM: Taurine catabolism dioxygenase TauD/TfdA inference protein motif:PRIAM:1.14.11.17 db_xref InterPro:IPR003819 4022324 4021344 gene locus_tag Alide2_3867 4022324 4021344 CDS product NADPH:quinone reductase EC_number 1.6.5.5 transl_table 11 protein_id gb|AEB86189.1||gnl|jgi|Alide2_3867 note PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like~KEGG: reu:Reut_A2148 zinc-containing alcohol dehydrogenase superfamily protein~SMART: Polyketide synthase, enoylreductase inference protein motif:PRIAM:1.6.5.5 db_xref InterPro:IPR013149 db_xref InterPro:IPR013154 db_xref InterPro:IPR020843 4023370 4022351 gene locus_tag Alide2_3868 4023370 4022351 CDS product UspA domain-containing protein transl_table 11 protein_id gb|AEB86190.1||gnl|jgi|Alide2_3868 note PFAM: UspA; Haemerythrin/HHE cation-binding motif~KEGG: reu:Reut_B3843 hypothetical protein inference protein motif:PFAM:PF00582 db_xref InterPro:IPR006016 db_xref InterPro:IPR012312 4023715 4023407 gene locus_tag Alide2_3869 4023715 4023407 CDS product Rieske (2Fe-2S) iron-sulfur domain protein transl_table 11 protein_id gb|AEB86191.1||gnl|jgi|Alide2_3869 note PFAM: Rieske [2Fe-2S] iron-sulphur domain~KEGG: bge:BC1002_3448 Rieske (2Fe-2S) iron-sulfur domain protein inference protein motif:PFAM:PF00355 db_xref GO:0016491 db_xref InterPro:IPR017941 4023876 4026611 gene locus_tag Alide2_3870 4023876 4026611 CDS product ATP-dependent transcriptional regulator, MalT-like, LuxR family transl_table 11 protein_id gb|AEB86192.1||gnl|jgi|Alide2_3870 note KEGG: reu:Reut_B3844 regulatory protein, LuxR~PFAM: Transcription regulator LuxR, C-terminal~SMART: Transcription regulator LuxR, C-terminal inference protein motif:PFAM:PF00196 db_xref GO:0003700 db_xref GO:0043565 db_xref InterPro:IPR000792 4026834 4028570 gene locus_tag Alide2_3871 4026834 4028570 CDS product protein of unknown function DUF1302 transl_table 11 protein_id gb|AEB86193.1||gnl|jgi|Alide2_3871 note PFAM: Protein of unknown function DUF1302~KEGG: lch:Lcho_2162 hypothetical protein inference protein motif:PFAM:PF06980 db_xref InterPro:IPR010727 4028582 4029931 gene locus_tag Alide2_3872 4028582 4029931 CDS product protein of unknown function DUF1329 transl_table 11 protein_id gb|AEB86194.1||gnl|jgi|Alide2_3872 note PFAM: Protein of unknown function DUF1329~KEGG: lch:Lcho_2163 hypothetical protein inference protein motif:PFAM:PF07044 db_xref InterPro:IPR010752 4030158 4031231 gene locus_tag Alide2_3873 4030158 4031231 CDS product glycosyl hydrolase transl_table 11 protein_id gb|AEB86195.1||gnl|jgi|Alide2_3873 note KEGG: psa:PST_0617 glycosyl hydrolase inference similar to AA sequence:KEGG:PST_0617 4031257 4033737 gene locus_tag Alide2_3874 4031257 4033737 CDS product transporter, putative transl_table 11 protein_id gb|AEB86196.1||gnl|jgi|Alide2_3874 note KEGG: psa:PST_0618 transporter, putative inference similar to AA sequence:KEGG:PST_0618 4033783 4034793 gene locus_tag Alide2_3875 4033783 4034793 CDS product Uncharacterized protein family UPF0324 transl_table 11 protein_id gb|AEB86197.1||gnl|jgi|Alide2_3875 note PFAM: Uncharacterised protein family UPF0324, prokaryote~KEGG: dac:Daci_1990 hypothetical protein inference protein motif:PFAM:PF03601 db_xref InterPro:IPR018383 4035016 4034851 gene locus_tag Alide2_3876 pseudo 4035656 4035147 gene locus_tag Alide2_3877 4035656 4035147 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86198.1||gnl|jgi|Alide2_3877 note KEGG: dia:Dtpsy_2910 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_2910 4035805 4036863 gene locus_tag Alide2_3878 4035805 4036863 CDS product TIM-barrel protein, nifR3 family transl_table 11 protein_id gb|AEB86199.1||gnl|jgi|Alide2_3878 note KEGG: dia:Dtpsy_2909 TIM-barrel protein, nifR3 family~TIGRFAM: tRNA-dihydrouridine synthase, TIM-barrel, NifR3~PFAM: tRNA-dihydrouridine synthase inference protein motif:TFAM:TIGR00737 db_xref GO:0016491 db_xref GO:0050660 db_xref InterPro:IPR001269 db_xref InterPro:IPR004652 4036841 4037077 gene locus_tag Alide2_3879 4036841 4037077 CDS product transcriptional regulator, Fis family transl_table 11 protein_id gb|AEB86200.1||gnl|jgi|Alide2_3879 note PFAM: Helix-turn-helix, Fis-type~KEGG: dia:Dtpsy_2908 transcriptional regulator, fis family inference protein motif:PFAM:PF02954 db_xref GO:0003700 db_xref InterPro:IPR002197 4037159 4038757 gene locus_tag Alide2_3880 4037159 4038757 CDS product Bifunctional purine biosynthesis protein purH EC_number 2.1.2.3 transl_table 11 protein_id gb|AEB86201.1||gnl|jgi|Alide2_3880 note KEGG: dia:Dtpsy_2907 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase~PFAM: AICARFT/IMPCHase bienzyme, transformylase domain; Methylglyoxal synthase-like domain~TIGRFAM: AICARFT/IMPCHase bienzyme~HAMAP: AICARFT/IMPCHase bienzyme~SMART: AICARFT/IMPCHase bienzyme, transformylase domain; Methylglyoxal synthase-like domain inference protein motif:HAMAP:MF_00139 db_xref InterPro:IPR002695 db_xref InterPro:IPR011607 db_xref InterPro:IPR013982 4040165 4038861 gene locus_tag Alide2_3881 4040165 4038861 CDS product glutamate-1-semialdehyde-2,1-aminomutase EC_number 5.4.3.8 transl_table 11 protein_id gb|AEB86202.1||gnl|jgi|Alide2_3881 note TIGRFAM: Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase~KEGG: dia:Dtpsy_2904 glutamate-1-semialdehyde aminotransferase~PFAM: Aminotransferase class-III inference protein motif:TFAM:TIGR00713 db_xref GO:0042286 db_xref InterPro:IPR004639 db_xref InterPro:IPR005814 4041051 4040149 gene locus_tag Alide2_3882 4041051 4040149 CDS product Phosphomethylpyrimidine kinase type-1 transl_table 11 protein_id gb|AEB86203.1||gnl|jgi|Alide2_3882 note PFAM: Phosphomethylpyrimidine kinase type-1~KEGG: dia:Dtpsy_2903 phosphomethylpyrimidine kinase type-1 inference protein motif:PFAM:PF08543 db_xref InterPro:IPR013749 4041191 4041364 gene locus_tag Alide2_3883 4041191 4041364 CDS product Rubredoxin-type Fe(Cys)4 protein transl_table 11 protein_id gb|AEB86204.1||gnl|jgi|Alide2_3883 note KEGG: aav:Aave_0900 rubredoxin-type Fe(Cys)4 protein~manually curated~PFAM: Rubredoxin-type Fe(Cys)4 protein inference protein motif:PFAM:PF00301 db_xref GO:0009055 db_xref GO:0046872 db_xref InterPro:IPR004039 4041416 4041820 gene locus_tag Alide2_3884 4041416 4041820 CDS product response regulator receiver protein transl_table 11 protein_id gb|AEB86205.1||gnl|jgi|Alide2_3884 note KEGG: aav:Aave_0901 response regulator receiver protein~PFAM: Signal transduction response regulator, receiver domain~SMART: Signal transduction response regulator, receiver domain inference protein motif:PFAM:PF00072 db_xref GO:0000156 db_xref InterPro:IPR001789 4041820 4042185 gene locus_tag Alide2_3885 4041820 4042185 CDS product response regulator receiver protein transl_table 11 protein_id gb|AEB86206.1||gnl|jgi|Alide2_3885 note KEGG: dia:Dtpsy_2900 response regulator receiver protein~PFAM: Signal transduction response regulator, receiver domain~SMART: Signal transduction response regulator, receiver domain inference protein motif:PFAM:PF00072 db_xref GO:0000156 db_xref InterPro:IPR001789 4042202 4042729 gene locus_tag Alide2_3886 4042202 4042729 CDS product CheW protein transl_table 11 protein_id gb|AEB86207.1||gnl|jgi|Alide2_3886 note KEGG: ajs:Ajs_3576 putative CheW protein~PFAM: CheW-like protein~SMART: CheW-like protein inference protein motif:PFAM:PF01584 db_xref GO:0004871 db_xref InterPro:IPR002545 4042750 4045014 gene locus_tag Alide2_3887 4042750 4045014 CDS product methyl-accepting chemotaxis sensory transducer transl_table 11 protein_id gb|AEB86208.1||gnl|jgi|Alide2_3887 note KEGG: dia:Dtpsy_2898 methyl-accepting chemotaxis sensory transducer~PFAM: Chemotaxis methyl-accepting receptor, signalling~SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain inference protein motif:PFAM:PF00015 db_xref GO:0004871 db_xref InterPro:IPR003660 db_xref InterPro:IPR004089 4045058 4050901 gene locus_tag Alide2_3888 4045058 4050901 CDS product CheA signal transduction histidine kinase transl_table 11 protein_id gb|AEB86209.1||gnl|jgi|Alide2_3888 note KEGG: dia:Dtpsy_2897 CheA signal transduction histidine kinase~PFAM: Signal transduction response regulator, receiver domain; ATPase-like, ATP-binding domain; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; Signal transduction histidine kinase, subgroup, homodimeric; CheW-like protein~SMART: Signal transduction response regulator, receiver domain; ATPase-like, ATP-binding domain; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; CheW-like protein inference protein motif:PFAM:PF00072 db_xref GO:0000155 db_xref GO:0000156 db_xref GO:0004673 db_xref GO:0004871 db_xref GO:0005524 db_xref InterPro:IPR001789 db_xref InterPro:IPR002545 db_xref InterPro:IPR003594 db_xref InterPro:IPR004105 db_xref InterPro:IPR008207 4050990 4051622 gene locus_tag Alide2_3889 4050990 4051622 CDS product UPF0301 protein yqgE transl_table 11 protein_id gb|AEB86210.1||gnl|jgi|Alide2_3889 note manually curated~HAMAP: Protein of unknown function DUF179~KEGG: dia:Dtpsy_2896 protein of unknown function DUF179~PFAM: Protein of unknown function DUF179 inference protein motif:HAMAP:MF_00758 db_xref InterPro:IPR003774 4051619 4052038 gene locus_tag Alide2_3890 4051619 4052038 CDS product Holliday junction resolvase transl_table 11 protein_id gb|AEB86211.1||gnl|jgi|Alide2_3890 note SMART: Resolvase, RNase H-like fold~TIGRFAM: Resolvase, holliday junction-type, YqgF-like~KEGG: dia:Dtpsy_2895 Holliday junction resolvase-like protein~HAMAP: Resolvase, holliday junction-type, YqgF-like~PFAM: Resolvase, holliday junction-type, YqgF-like inference protein motif:HAMAP:MF_00651 db_xref InterPro:IPR005227 db_xref InterPro:IPR006641 4052035 4052571 gene locus_tag Alide2_3891 4052035 4052571 CDS product Uracil phosphoribosyltransferase EC_number 2.4.2.9 transl_table 11 protein_id gb|AEB86212.1||gnl|jgi|Alide2_3891 note KEGG: dia:Dtpsy_2894 phosphoribosyltransferase~PFAM: Phosphoribosyltransferase inference protein motif:PRIAM:2.4.2.9 db_xref InterPro:IPR000836 4052574 4053536 gene locus_tag Alide2_3892 4052574 4053536 CDS product Aspartate carbamoyltransferase EC_number 2.1.3.2 transl_table 11 protein_id gb|AEB86213.1||gnl|jgi|Alide2_3892 note PFAM: Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain; Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding~TIGRFAM: Aspartate carbamoyltransferase, eukaryotic~HAMAP: Aspartate carbamoyltransferase, eukaryotic~KEGG: dia:Dtpsy_2893 aspartate carbamoyltransferase catalytic subunit inference protein motif:HAMAP:MF_00001 db_xref InterPro:IPR002082 db_xref InterPro:IPR006131 db_xref InterPro:IPR006132 4053604 4054899 gene locus_tag Alide2_3893 4053604 4054899 CDS product Allantoinase EC_number 3.5.2.5 transl_table 11 protein_id gb|AEB86214.1||gnl|jgi|Alide2_3893 note KEGG: dia:Dtpsy_2892 amidohydrolase~PFAM: Amidohydrolase 1 inference protein motif:PRIAM:3.5.2.5 db_xref InterPro:IPR006680 4054910 4055650 gene locus_tag Alide2_3894 4054910 4055650 CDS product phospholipid/glycerol acyltransferase transl_table 11 protein_id gb|AEB86215.1||gnl|jgi|Alide2_3894 note KEGG: dia:Dtpsy_2891 phospholipid/glycerol acyltransferase~PFAM: Phospholipid/glycerol acyltransferase~SMART: Phospholipid/glycerol acyltransferase inference protein motif:PFAM:PF01553 db_xref GO:0008415 db_xref InterPro:IPR002123 4056717 4055653 gene locus_tag Alide2_3895 4056717 4055653 CDS product Fe(3+)-transporting ATPase EC_number 3.6.3.30 transl_table 11 protein_id gb|AEB86216.1||gnl|jgi|Alide2_3895 note PFAM: ABC transporter-like; Transport-associated OB, type 2~KEGG: ajs:Ajs_3566 ABC transporter related~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.30 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 db_xref InterPro:IPR013611 4056765 4058450 gene locus_tag Alide2_3896 4056765 4058450 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB86217.1||gnl|jgi|Alide2_3896 note PFAM: Binding-protein-dependent transport systems inner membrane component~KEGG: ajs:Ajs_3565 binding-protein-dependent transport systems inner membrane component inference protein motif:PFAM:PF00528 db_xref GO:0005215 db_xref InterPro:IPR000515 4058466 4058816 gene locus_tag Alide2_3897 4058466 4058816 CDS product arsenate reductase transl_table 11 protein_id gb|AEB86218.1||gnl|jgi|Alide2_3897 note KEGG: ajs:Ajs_3564 arsenate reductase~TIGRFAM: Arsenate reductase~PFAM: Arsenate reductase-like inference protein motif:TFAM:TIGR00014 db_xref GO:0008794 db_xref InterPro:IPR006659 db_xref InterPro:IPR006660 4058883 4060403 gene locus_tag Alide2_3898 4058883 4060403 CDS product protease Do EC_number 3.4.21.108 transl_table 11 protein_id gb|AEB86219.1||gnl|jgi|Alide2_3898 note SMART: PDZ/DHR/GLGF~TIGRFAM: Peptidase S1C, Do~KEGG: aav:Aave_3965 protease Do~PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF inference protein motif:TFAM:TIGR02037 db_xref GO:0004252 db_xref InterPro:IPR001254 db_xref InterPro:IPR001478 db_xref InterPro:IPR011782 4060432 4061100 gene locus_tag Alide2_3899 4060432 4061100 CDS product two component transcriptional regulator, winged helix family transl_table 11 protein_id gb|AEB86220.1||gnl|jgi|Alide2_3899 note KEGG: vap:Vapar_2384 two component transcriptional regulator, winged helix family~PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal~SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal inference protein motif:PFAM:PF00072 db_xref GO:0000156 db_xref GO:0003677 db_xref InterPro:IPR001789 db_xref InterPro:IPR001867 4061097 4062473 gene locus_tag Alide2_3900 4061097 4062473 CDS product integral membrane sensor signal transduction histidine kinase transl_table 11 protein_id gb|AEB86221.1||gnl|jgi|Alide2_3900 note KEGG: aav:Aave_3963 integral membrane sensor signal transduction histidine kinase~PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain~SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain inference protein motif:PFAM:PF02518 db_xref GO:0000155 db_xref GO:0005524 db_xref InterPro:IPR003594 db_xref InterPro:IPR003660 db_xref InterPro:IPR003661 4062470 4063873 gene locus_tag Alide2_3901 4062470 4063873 CDS product cardiolipin synthetase 2 transl_table 11 protein_id gb|AEB86222.1||gnl|jgi|Alide2_3901 note KEGG: ajs:Ajs_3563 cardiolipin synthetase 2 inference similar to AA sequence:KEGG:Ajs_3563 db_xref InterPro:IPR001736 4065817 4063889 gene locus_tag Alide2_3902 4065817 4063889 CDS product Ferredoxin--NAD(+) reductase EC_number 1.18.1.3 transl_table 11 protein_id gb|AEB86223.1||gnl|jgi|Alide2_3902 note KEGG: app:CAP2UW1_1324 oxidoreductase FAD-binding domain protein~PFAM: Oxidoreductase, FAD-binding domain; Ferredoxin; Cytochrome b/b6, N-terminal; Oxidoreductase FAD/NAD(P)-binding inference protein motif:PRIAM:1.18.1.3 db_xref InterPro:IPR001041 db_xref InterPro:IPR001433 db_xref InterPro:IPR005797 db_xref InterPro:IPR008333 4067262 4065814 gene locus_tag Alide2_3903 4067262 4065814 CDS product putative cytochrome c oxidase, subunit I transl_table 11 protein_id gb|AEB86224.1||gnl|jgi|Alide2_3903 note KEGG: app:CAP2UW1_3424 putative cytochrome c oxidase, subunit I inference similar to AA sequence:KEGG:CAP2UW1_3424 4067762 4067259 gene locus_tag Alide2_3904 4067762 4067259 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86225.1||gnl|jgi|Alide2_3904 note KEGG: app:CAP2UW1_1325 hypothetical protein inference similar to AA sequence:KEGG:CAP2UW1_1325 4069342 4067759 gene locus_tag Alide2_3905 4069342 4067759 CDS product methyl-viologen-reducing hydrogenase delta subunit transl_table 11 protein_id gb|AEB86226.1||gnl|jgi|Alide2_3905 note PFAM: Methyl-viologen-reducing hydrogenase, delta subunit; 4Fe-4S binding domain~KEGG: app:CAP2UW1_1327 methyl-viologen-reducing hydrogenase delta subunit inference protein motif:PFAM:PF02662 db_xref GO:0009055 db_xref GO:0051536 db_xref InterPro:IPR001450 db_xref InterPro:IPR003813 4070214 4069357 gene locus_tag Alide2_3906 4070214 4069357 CDS product electron transport protein SCO1/SenC transl_table 11 protein_id gb|AEB86227.1||gnl|jgi|Alide2_3906 note PFAM: Copper chaperone SCO1/SenC~KEGG: app:CAP2UW1_1788 electron transport protein SCO1/SenC inference protein motif:PFAM:PF02630 db_xref InterPro:IPR003782 4071134 4070232 gene locus_tag Alide2_3907 4071134 4070232 CDS product Protoheme IX farnesyltransferase transl_table 11 protein_id gb|AEB86228.1||gnl|jgi|Alide2_3907 note TIGRFAM: Protohaem IX farnesyltransferase~HAMAP: Protohaem IX farnesyltransferase~KEGG: app:CAP2UW1_1789 protoheme IX farnesyltransferase~PFAM: UbiA prenyltransferase inference protein motif:HAMAP:MF_00154 db_xref InterPro:IPR000537 db_xref InterPro:IPR006369 4072852 4071152 gene locus_tag Alide2_3908 4072852 4071152 CDS product Cytochrome-c oxidase EC_number 1.9.3.1 transl_table 11 protein_id gb|AEB86229.1||gnl|jgi|Alide2_3908 note KEGG: app:CAP2UW1_1790 cytochrome c oxidase subunit I~PFAM: Cytochrome c oxidase, subunit I inference protein motif:PRIAM:1.9.3.1 db_xref InterPro:IPR000883 4073405 4072866 gene locus_tag Alide2_3909 4073405 4072866 CDS product cytochrome c oxidase subunit II transl_table 11 protein_id gb|AEB86230.1||gnl|jgi|Alide2_3909 note PFAM: Cytochrome c oxidase subunit II C-terminal~KEGG: app:CAP2UW1_1791 cytochrome c oxidase subunit II inference protein motif:PFAM:PF00116 db_xref GO:0004129 db_xref GO:0005507 db_xref InterPro:IPR002429 4073571 4073419 gene locus_tag Alide2_3910 4073571 4073419 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86231.1||gnl|jgi|Alide2_3910 note KEGG: mag:amb2220 hypothetical protein inference similar to AA sequence:KEGG:amb2220 4073838 4074737 gene locus_tag Alide2_3911 4073838 4074737 CDS product cytochrome oxidase assembly transl_table 11 protein_id gb|AEB86232.1||gnl|jgi|Alide2_3911 note PFAM: Heme A synthase/Protoheme IX farnesyltransferase~KEGG: avn:Avin_00950 cytochrome oxidase assembly protein inference protein motif:PFAM:PF02628 db_xref InterPro:IPR003780 4074843 4074769 gene locus_tag Alide2_R0053 note tRNA-Arg4 4074843 4074769 tRNA product tRNA-Arg 4079035 4074947 gene locus_tag Alide2_3912 4079035 4074947 CDS product protein of unknown function DUF490 transl_table 11 protein_id gb|AEB86233.1||gnl|jgi|Alide2_3912 note PFAM: Protein of unknown function DUF490~KEGG: ajs:Ajs_3561 hypothetical protein inference protein motif:PFAM:PF04357 db_xref InterPro:IPR007452 4081036 4079141 gene locus_tag Alide2_3913 4081036 4079141 CDS product surface antigen (D15) transl_table 11 protein_id gb|AEB86234.1||gnl|jgi|Alide2_3913 note PFAM: Bacterial surface antigen (D15)~KEGG: dia:Dtpsy_2883 surface antigen (D15) inference protein motif:PFAM:PF01103 db_xref InterPro:IPR000184 4082228 4081041 gene locus_tag Alide2_3914 4082228 4081041 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86235.1||gnl|jgi|Alide2_3914 note KEGG: ajs:Ajs_3559 hypothetical protein inference similar to AA sequence:KEGG:Ajs_3559 4083652 4082303 gene locus_tag Alide2_3915 4083652 4082303 CDS product MmgE/PrpD family protein transl_table 11 protein_id gb|AEB86236.1||gnl|jgi|Alide2_3915 note PFAM: MmgE/PrpD~KEGG: nmg:Nmag_3457 MmgE/PrpD family protein inference protein motif:PFAM:PF03972 db_xref GO:0047547 db_xref InterPro:IPR005656 4084419 4083637 gene locus_tag Alide2_3916 4084419 4083637 CDS product Enoyl-CoA hydratase/isomerase transl_table 11 protein_id gb|AEB86237.1||gnl|jgi|Alide2_3916 note PFAM: Crotonase, core~KEGG: pzu:PHZ_c3022 enoyl-CoA hydratase/isomerase family protein inference protein motif:PFAM:PF00378 db_xref GO:0003824 db_xref InterPro:IPR001753 4085592 4084432 gene locus_tag Alide2_3917 4085592 4084432 CDS product Butyryl-CoA dehydrogenase EC_number 1.3.8.1 transl_table 11 protein_id gb|AEB86238.1||gnl|jgi|Alide2_3917 note KEGG: sti:Sthe_1794 acyl-CoA dehydrogenase domain protein~PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal inference protein motif:PRIAM:1.3.99.2 db_xref InterPro:IPR006090 db_xref InterPro:IPR006091 db_xref InterPro:IPR006092 4086805 4085609 gene locus_tag Alide2_3918 4086805 4085609 CDS product Formyl-CoA transferase EC_number 2.8.3.16 transl_table 11 protein_id gb|AEB86239.1||gnl|jgi|Alide2_3918 note KEGG: sti:Sthe_3003 formyl-CoA transferase~PFAM: CoA-transferase family III inference protein motif:PRIAM:2.8.3.16 db_xref InterPro:IPR003673 4087592 4086813 gene locus_tag Alide2_3919 4087592 4086813 CDS product transcriptional regulator, GntR family with UTRA sensor domain transl_table 11 protein_id gb|AEB86240.1||gnl|jgi|Alide2_3919 note KEGG: bpy:Bphyt_0617 transcriptional regulator, GntR family~PFAM: HTH transcriptional regulator, GntR; UbiC transcription regulator-associated~SMART: HTH transcriptional regulator, GntR; UbiC transcription regulator-associated inference protein motif:PFAM:PF00392 db_xref GO:0003677 db_xref GO:0003700 db_xref GO:0030528 db_xref InterPro:IPR000524 db_xref InterPro:IPR011663 4087853 4088866 gene locus_tag Alide2_3920 4087853 4088866 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86241.1||gnl|jgi|Alide2_3920 note KEGG: cti:RALTA_B1738 conserved hypothetical protein; UPF0065 inference similar to AA sequence:KEGG:RALTA_B1738 db_xref InterPro:IPR005064 4089481 4088882 gene locus_tag Alide2_3921 4089481 4088882 CDS product GCN5-related N-acetyltransferase transl_table 11 protein_id gb|AEB86242.1||gnl|jgi|Alide2_3921 note KEGG: dia:Dtpsy_2881 GCN5-related N-acetyltransferase inference similar to AA sequence:KEGG:Dtpsy_2881 4090335 4089493 gene locus_tag Alide2_3922 4090335 4089493 CDS product AAA ATPase central domain protein transl_table 11 protein_id gb|AEB86243.1||gnl|jgi|Alide2_3922 note KEGG: ajs:Ajs_3556 ATPase central domain-containing protein~PFAM: ATPase, AAA-type, core~SMART: ATPase, AAA+ type, core inference protein motif:PFAM:PF00004 db_xref GO:0005524 db_xref InterPro:IPR003593 db_xref InterPro:IPR003959 4090456 4091115 gene locus_tag Alide2_3923 4090456 4091115 CDS product cytochrome c class I transl_table 11 protein_id gb|AEB86244.1||gnl|jgi|Alide2_3923 note PFAM: Cytochrome c, class I~KEGG: dia:Dtpsy_2878 cytochrome c class I inference protein motif:PFAM:PF00034 db_xref GO:0005506 db_xref GO:0009055 db_xref GO:0020037 db_xref InterPro:IPR003088 4091562 4092443 gene locus_tag Alide2_3924 4091562 4092443 CDS product UspA domain-containing protein transl_table 11 protein_id gb|AEB86245.1||gnl|jgi|Alide2_3924 note PFAM: UspA~KEGG: ajs:Ajs_3554 UspA domain-containing protein inference protein motif:PFAM:PF00582 db_xref InterPro:IPR006016 4092812 4092378 gene locus_tag Alide2_3925 4092812 4092378 CDS product Domain of unknown function DUF1841 transl_table 11 protein_id gb|AEB86246.1||gnl|jgi|Alide2_3925 note PFAM: Protein of unknown function DUF1841~KEGG: ajs:Ajs_3553 hypothetical protein inference protein motif:PFAM:PF08897 db_xref InterPro:IPR014993 4093626 4092823 gene locus_tag Alide2_3926 4093626 4092823 CDS product transcriptional regulator, IclR family transl_table 11 protein_id gb|AEB86247.1||gnl|jgi|Alide2_3926 note TIGRFAM: Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR~PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal~KEGG: dia:Dtpsy_2874 transcriptional regulator, IclR family~SMART: Transcription regulator IclR, N-terminal inference protein motif:TFAM:TIGR02431 db_xref GO:0003677 db_xref GO:0016563 db_xref InterPro:IPR005471 db_xref InterPro:IPR012794 db_xref InterPro:IPR014757 4093729 4094424 gene locus_tag Alide2_3927 4093729 4094424 CDS product 3-oxoacid CoA-transferase, A subunit EC_number 2.8.3.6 transl_table 11 protein_id gb|AEB86248.1||gnl|jgi|Alide2_3927 note SMART: Coenzyme A transferase~TIGRFAM: 3-oxoacid CoA-transferase, subunit A~KEGG: dia:Dtpsy_2873 3-oxoacid CoA-transferase, A subunit~PFAM: Coenzyme A transferase inference protein motif:TFAM:TIGR02429 db_xref GO:0008410 db_xref InterPro:IPR004165 db_xref InterPro:IPR012792 4094447 4095091 gene locus_tag Alide2_3928 4094447 4095091 CDS product 3-oxoacid CoA-transferase, B subunit EC_number 2.8.3.6 transl_table 11 protein_id gb|AEB86249.1||gnl|jgi|Alide2_3928 note SMART: Coenzyme A transferase~TIGRFAM: 3-oxoacid CoA-transferase, subunit B~KEGG: dia:Dtpsy_2872 3-oxoacid CoA-transferase, B subunit~PFAM: Coenzyme A transferase inference protein motif:TFAM:TIGR02428 db_xref GO:0008410 db_xref InterPro:IPR004165 db_xref InterPro:IPR012791 4095169 4096371 gene locus_tag Alide2_3929 4095169 4096371 CDS product beta-ketoadipyl CoA thiolase EC_number 2.3.1.174 transl_table 11 protein_id gb|AEB86250.1||gnl|jgi|Alide2_3929 note TIGRFAM: Beta-ketoadipyl CoA thiolase; Thiolase~KEGG: dac:Daci_5563 beta-ketoadipyl CoA thiolase~PFAM: Thiolase, N-terminal; Thiolase, C-terminal inference protein motif:TFAM:TIGR02430 db_xref GO:0008410 db_xref InterPro:IPR002155 db_xref InterPro:IPR012793 db_xref InterPro:IPR020616 db_xref InterPro:IPR020617 4096433 4097158 gene locus_tag Alide2_3930 4096433 4097158 CDS product 3-oxoacyl-(acyl-carrier-protein) reductase EC_number 1.1.1.100 transl_table 11 protein_id gb|AEB86251.1||gnl|jgi|Alide2_3930 note KEGG: aav:Aave_3940 short-chain dehydrogenase/reductase SDR~PFAM: Short-chain dehydrogenase/reductase SDR inference protein motif:PRIAM:1.1.1.100 db_xref InterPro:IPR002198 4097203 4098195 gene locus_tag Alide2_3931 4097203 4098195 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86252.1||gnl|jgi|Alide2_3931 note KEGG: dia:Dtpsy_2869 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_2869 db_xref InterPro:IPR005064 4098529 4098368 gene locus_tag Alide2_3932 pseudo 4099401 4098577 gene locus_tag Alide2_3933 4099401 4098577 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB86253.1||gnl|jgi|Alide2_3933 note PFAM: LysR, substrate-binding~KEGG: rec:RHECIAT_CH0001484 putative transcriptional regulator protein, LysR family inference protein motif:PFAM:PF03466 db_xref InterPro:IPR005119 4099446 4100075 gene locus_tag Alide2_3934 4099446 4100075 CDS product putative secreted protein transl_table 11 protein_id gb|AEB86254.1||gnl|jgi|Alide2_3934 note KEGG: bpt:Bpet0051 putative secreted protein inference similar to AA sequence:KEGG:Bpet0051 db_xref InterPro:IPR005064 4100089 4101276 gene locus_tag Alide2_3935 4100089 4101276 CDS product amidohydrolase EC_number 3.5.1.32 transl_table 11 protein_id gb|AEB86255.1||gnl|jgi|Alide2_3935 note TIGRFAM: Peptidase M20D, amidohydrolase~KEGG: bph:Bphy_3769 amidohydrolase~PFAM: Peptidase M20 inference protein motif:TFAM:TIGR01891 db_xref GO:0016787 db_xref InterPro:IPR002933 db_xref InterPro:IPR010168 4102385 4101390 gene locus_tag Alide2_3936 4102385 4101390 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86256.1||gnl|jgi|Alide2_3936 note KEGG: vap:Vapar_4972 hypothetical protein inference similar to AA sequence:KEGG:Vapar_4972 db_xref InterPro:IPR005064 db_xref InterPro:IPR006311 4103371 4102412 gene locus_tag Alide2_3937 4103371 4102412 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86257.1||gnl|jgi|Alide2_3937 note KEGG: vap:Vapar_4085 hypothetical protein inference similar to AA sequence:KEGG:Vapar_4085 db_xref InterPro:IPR005064 4104801 4103368 gene locus_tag Alide2_3938 4104801 4103368 CDS product MmgE/PrpD family protein transl_table 11 protein_id gb|AEB86258.1||gnl|jgi|Alide2_3938 note PFAM: MmgE/PrpD~KEGG: vei:Veis_4268 MmgE/PrpD family protein inference protein motif:PFAM:PF03972 db_xref GO:0047547 db_xref InterPro:IPR005656 4105984 4104806 gene locus_tag Alide2_3939 4105984 4104806 CDS product PrpF protein transl_table 11 protein_id gb|AEB86259.1||gnl|jgi|Alide2_3939 note PFAM: PrpF protein~KEGG: cak:Caul_0497 hypothetical protein inference protein motif:PFAM:PF04303 db_xref InterPro:IPR007400 4106997 4105996 gene locus_tag Alide2_3940 4106997 4105996 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86260.1||gnl|jgi|Alide2_3940 note KEGG: pol:Bpro_2294 hypothetical protein inference similar to AA sequence:KEGG:Bpro_2294 db_xref InterPro:IPR005064 4107652 4107020 gene locus_tag Alide2_3941 4107652 4107020 CDS product 3-isopropylmalate dehydratase, small subunit transl_table 11 protein_id gb|AEB86261.1||gnl|jgi|Alide2_3941 note KEGG: cak:Caul_0508 isopropylmalate isomerase small subunit~TIGRFAM: 3-isopropylmalate dehydratase, small subunit~PFAM: Aconitase A/isopropylmalate dehydratase small subunit, swivel inference protein motif:TFAM:TIGR00171 db_xref GO:0003861 db_xref InterPro:IPR000573 db_xref InterPro:IPR004431 4109064 4107655 gene locus_tag Alide2_3942 4109064 4107655 CDS product 3-isopropylmalate dehydratase, large subunit transl_table 11 protein_id gb|AEB86262.1||gnl|jgi|Alide2_3942 note KEGG: bja:bll0416 isopropylmalate isomerase large subunit~TIGRFAM: 3-isopropylmalate dehydratase, large subunit~PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha inference protein motif:TFAM:TIGR00170 db_xref GO:0003861 db_xref InterPro:IPR001030 db_xref InterPro:IPR004430 4109935 4109072 gene locus_tag Alide2_3943 4109935 4109072 CDS product Carboxyvinyl-carboxyphosphonate phosphorylmutase EC_number 2.7.8.23 transl_table 11 protein_id gb|AEB86263.1||gnl|jgi|Alide2_3943 note KEGG: cak:Caul_0509 carboxyvinyl-carboxyphosphonate phosphorylmutase~PFAM: Isocitrate lyase/phosphorylmutase inference protein motif:PRIAM:2.7.8.23 db_xref InterPro:IPR000918 4110099 4110893 gene locus_tag Alide2_3944 4110099 4110893 CDS product transcriptional regulator, GntR family with UTRA sensor domain transl_table 11 protein_id gb|AEB86264.1||gnl|jgi|Alide2_3944 note KEGG: mav:MAV_1744 transcriptional regulator, GntR family protein~PFAM: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR~SMART: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR inference protein motif:PFAM:PF07702 db_xref GO:0003677 db_xref GO:0003700 db_xref GO:0030528 db_xref InterPro:IPR000524 db_xref InterPro:IPR011663 4112798 4110948 gene locus_tag Alide2_3945 4112798 4110948 CDS product potassium efflux system protein transl_table 11 protein_id gb|AEB86265.1||gnl|jgi|Alide2_3945 note KEGG: dia:Dtpsy_2868 glutathione-regulated potassium-efflux system protein KefC~TIGRFAM: K+/H+ exchanger~PFAM: Cation/H+ exchanger; Regulator of K+ conductance, N-terminal inference protein motif:TFAM:TIGR00932 db_xref GO:0008324 db_xref InterPro:IPR003148 db_xref InterPro:IPR004771 db_xref InterPro:IPR006153 4112917 4113555 gene locus_tag Alide2_3946 4112917 4113555 CDS product Lysine exporter protein (LYSE/YGGA) transl_table 11 protein_id gb|AEB86266.1||gnl|jgi|Alide2_3946 note PFAM: Lysine exporter protein (LYSE/YGGA)~KEGG: ajs:Ajs_3544 lysine exporter protein LysE/YggA inference protein motif:PFAM:PF01810 db_xref InterPro:IPR001123 4113635 4114255 gene locus_tag Alide2_3947 4113635 4114255 CDS product Cobyrinic acid ac-diamide synthase transl_table 11 protein_id gb|AEB86267.1||gnl|jgi|Alide2_3947 note PFAM: Cobyrinic acid a,c-diamide synthase~KEGG: dia:Dtpsy_2866 cobyrinic acid ac-diamide synthase inference protein motif:PFAM:PF01656 db_xref InterPro:IPR002586 4114658 4114335 gene locus_tag Alide2_3948 4114658 4114335 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86268.1||gnl|jgi|Alide2_3948 note KEGG: aav:Aave_3912 hypothetical protein inference similar to AA sequence:KEGG:Aave_3912 4114885 4115808 gene locus_tag Alide2_3949 4114885 4115808 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB86269.1||gnl|jgi|Alide2_3949 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: aav:Aave_3911 LysR family transcriptional regulator inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 4116281 4115805 gene locus_tag Alide2_3950 4116281 4115805 CDS product tRNA/rRNA methyltransferase (SpoU) transl_table 11 protein_id gb|AEB86270.1||gnl|jgi|Alide2_3950 note PFAM: tRNA/rRNA methyltransferase, SpoU~KEGG: dia:Dtpsy_2864 tRNA/rRNA methyltransferase (SpoU) inference protein motif:PFAM:PF00588 db_xref GO:0003723 db_xref GO:0008173 db_xref InterPro:IPR001537 4117073 4116336 gene locus_tag Alide2_3951 4117073 4116336 CDS product phosphoribosyltransferase transl_table 11 protein_id gb|AEB86271.1||gnl|jgi|Alide2_3951 note PFAM: Phosphoribosyltransferase~KEGG: ajs:Ajs_3540 ComF family protein inference protein motif:PFAM:PF00156 db_xref InterPro:IPR000836 4117109 4118017 gene locus_tag Alide2_3952 4117109 4118017 CDS product biotin synthesis protein BioC transl_table 11 protein_id gb|AEB86272.1||gnl|jgi|Alide2_3952 note KEGG: ajs:Ajs_3539 biotin synthesis protein BioC inference similar to AA sequence:KEGG:Ajs_3539 4118469 4119632 gene locus_tag Alide2_3953 4118469 4119632 CDS product cytochrome c oxidase, subunit II transl_table 11 protein_id gb|AEB86273.1||gnl|jgi|Alide2_3953 note KEGG: dia:Dtpsy_2860 cytochrome c oxidase, subunit II~TIGRFAM: Cytochrome c oxidase, subunit II~PFAM: Cytochrome c oxidase subunit II C-terminal; Cytochrome C oxidase subunit II, transmembrane domain; Cytochrome c, class I inference protein motif:TFAM:TIGR02866 db_xref GO:0016491 db_xref InterPro:IPR002429 db_xref InterPro:IPR003088 db_xref InterPro:IPR011759 db_xref InterPro:IPR014222 4119670 4121301 gene locus_tag Alide2_3954 4119670 4121301 CDS product cytochrome c oxidase, subunit I transl_table 11 protein_id gb|AEB86274.1||gnl|jgi|Alide2_3954 note KEGG: ajs:Ajs_3536 cytochrome-c oxidase~TIGRFAM: Cytochrome c oxidase, subunit I bacterial type~PFAM: Cytochrome c oxidase, subunit I inference protein motif:TFAM:TIGR02891 db_xref GO:0004129 db_xref GO:0005507 db_xref InterPro:IPR000883 db_xref InterPro:IPR014241 4121319 4121435 gene locus_tag Alide2_3955 4121319 4121435 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86275.1||gnl|jgi|Alide2_3955 inference ab initio prediction:Prodigal:1.4 4121451 4122074 gene locus_tag Alide2_3956 4121451 4122074 CDS product cytochrome c oxidase assembly protein CtaG/Cox11 transl_table 11 protein_id gb|AEB86276.1||gnl|jgi|Alide2_3956 note PFAM: Cytochrome c oxidase assembly protein CtaG/Cox11~KEGG: dia:Dtpsy_2857 cytochrome c oxidase assembly protein inference protein motif:PFAM:PF04442 db_xref GO:0005507 db_xref InterPro:IPR007533 4122074 4122286 gene locus_tag Alide2_3957 4122074 4122286 CDS product Protein of unknown function DUF2970 transl_table 11 protein_id gb|AEB86277.1||gnl|jgi|Alide2_3957 note PFAM: Protein of unknown function DUF2970~KEGG: dia:Dtpsy_2856 hypothetical protein inference protein motif:PFAM:PF11174 db_xref InterPro:IPR021344 4122346 4123230 gene locus_tag Alide2_3958 4122346 4123230 CDS product cytochrome c oxidase subunit III transl_table 11 protein_id gb|AEB86278.1||gnl|jgi|Alide2_3958 note PFAM: Cytochrome c oxidase, subunit III~KEGG: dia:Dtpsy_2855 cytochrome c oxidase subunit III inference protein motif:PFAM:PF00510 db_xref GO:0004129 db_xref InterPro:IPR000298 4123537 4123304 gene locus_tag Alide2_3959 4123537 4123304 CDS product putative transmembrane protein transl_table 11 protein_id gb|AEB86279.1||gnl|jgi|Alide2_3959 note KEGG: ajs:Ajs_3531 putative transmembrane protein inference similar to AA sequence:KEGG:Ajs_3531 4123544 4124311 gene locus_tag Alide2_3960 4123544 4124311 CDS product putative transmembrane cytochrome oxidase transl_table 11 protein_id gb|AEB86280.1||gnl|jgi|Alide2_3960 note KEGG: dia:Dtpsy_2853 putative transmembrane cytochrome oxidase inference similar to AA sequence:KEGG:Dtpsy_2853 4124253 4125008 gene locus_tag Alide2_3961 4124253 4125008 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86281.1||gnl|jgi|Alide2_3961 note KEGG: ajs:Ajs_3529 hypothetical protein inference similar to AA sequence:KEGG:Ajs_3529 4125005 4126162 gene locus_tag Alide2_3962 4125005 4126162 CDS product cytochrome oxidase assembly transl_table 11 protein_id gb|AEB86282.1||gnl|jgi|Alide2_3962 note PFAM: Heme A synthase/Protoheme IX farnesyltransferase~KEGG: ajs:Ajs_3528 cytochrome oxidase assembly inference protein motif:PFAM:PF02628 db_xref InterPro:IPR003780 4126159 4127085 gene locus_tag Alide2_3963 4126159 4127085 CDS product protoheme IX farnesyltransferase transl_table 11 protein_id gb|AEB86283.1||gnl|jgi|Alide2_3963 note KEGG: dia:Dtpsy_2850 protoheme IX farnesyltransferase~TIGRFAM: Protohaem IX farnesyltransferase~PFAM: UbiA prenyltransferase inference protein motif:TFAM:TIGR01473 db_xref GO:0008495 db_xref InterPro:IPR000537 db_xref InterPro:IPR006369 4127143 4127706 gene locus_tag Alide2_3964 4127143 4127706 CDS product electron transport protein SCO1/SenC transl_table 11 protein_id gb|AEB86284.1||gnl|jgi|Alide2_3964 note PFAM: Copper chaperone SCO1/SenC~KEGG: dia:Dtpsy_2849 electron transport protein SCO1/SenC inference protein motif:PFAM:PF02630 db_xref InterPro:IPR003782 4128750 4127740 gene locus_tag Alide2_3965 4128750 4127740 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86285.1||gnl|jgi|Alide2_3965 note KEGG: dia:Dtpsy_2846 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_2846 db_xref InterPro:IPR005064 4129828 4128893 gene locus_tag Alide2_3966 4129828 4128893 CDS product RNA polymerase, sigma 32 subunit, RpoH transl_table 11 protein_id gb|AEB86286.1||gnl|jgi|Alide2_3966 note KEGG: dia:Dtpsy_2845 RNA polymerase, sigma 32 subunit, RpoH~TIGRFAM: RNA polymerase sigma factor RpoH, proteobacteria; RNA polymerase sigma-70~PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 4; RNA polymerase sigma-70 region 1.2 inference protein motif:TFAM:TIGR02392 db_xref GO:0003677 db_xref GO:0003700 db_xref GO:0008270 db_xref GO:0016987 db_xref InterPro:IPR007627 db_xref InterPro:IPR007630 db_xref InterPro:IPR009042 db_xref InterPro:IPR012759 db_xref InterPro:IPR014284 4132236 4130722 gene locus_tag Alide2_3967 4132236 4130722 CDS product transposase IS66 transl_table 11 protein_id gb|AEB86287.1||gnl|jgi|Alide2_3967 note PFAM: Transposase, IS66~KEGG: dia:Dtpsy_2523 transposase IS66 inference protein motif:PFAM:PF03050 db_xref InterPro:IPR004291 4132651 4132319 gene locus_tag Alide2_3968 4132651 4132319 CDS product IS66 Orf2 family protein transl_table 11 protein_id gb|AEB86288.1||gnl|jgi|Alide2_3968 note PFAM: Transposase (putative), IS66 Orf2-like~KEGG: rfr:Rfer_2710 IS66 Orf2 like inference protein motif:PFAM:PF05717 db_xref InterPro:IPR008878 4133076 4132648 gene locus_tag Alide2_3969 4133076 4132648 CDS product transposase IS3/IS911 family protein transl_table 11 protein_id gb|AEB86289.1||gnl|jgi|Alide2_3969 note PFAM: Transposase IS3/IS911family~KEGG: rfr:Rfer_2709 transposase IS3/IS911 inference protein motif:PFAM:PF01527 db_xref GO:0003677 db_xref GO:0004803 db_xref InterPro:IPR002514 4133373 4133131 gene locus_tag Alide2_3970 4133373 4133131 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86290.1||gnl|jgi|Alide2_3970 note KEGG: pna:Pnap_4649 IS1477 transposase inference similar to AA sequence:KEGG:Pnap_4649 4133672 4133406 gene locus_tag Alide2_3971 4133672 4133406 CDS product transposase IS3/IS911 family protein transl_table 11 protein_id gb|AEB86291.1||gnl|jgi|Alide2_3971 note PFAM: Transposase IS3/IS911family~KEGG: pna:Pnap_4650 transposase IS3/IS911 family protein inference protein motif:PFAM:PF01527 db_xref GO:0003677 db_xref GO:0004803 db_xref InterPro:IPR002514 4133753 4133980 gene locus_tag Alide2_3972 pseudo 4134223 4135314 gene locus_tag Alide2_3973 4134223 4135314 CDS product Sporulation domain-containing protein transl_table 11 protein_id gb|AEB86292.1||gnl|jgi|Alide2_3973 note PFAM: Sporulation-related domain~KEGG: aav:Aave_3575 sporulation domain-containing protein inference protein motif:PFAM:PF05036 db_xref InterPro:IPR007730 4135388 4135720 gene locus_tag Alide2_3974 4135388 4135720 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86293.1||gnl|jgi|Alide2_3974 note KEGG: ajs:Ajs_0920 hypothetical protein inference similar to AA sequence:KEGG:Ajs_0920 4136962 4135730 gene locus_tag Alide2_3975 4136962 4135730 CDS product oxygen-independent coproporphyrinogen III oxidase transl_table 11 protein_id gb|AEB86294.1||gnl|jgi|Alide2_3975 note TIGRFAM: Putative oxygen-independent coproporphyrinogen III oxidase~PFAM: Radical SAM; HemN, C-terminal~KEGG: dia:Dtpsy_0856 oxygen-independent coproporphyrinogen III oxidase~SMART: Elongator protein 3/MiaB/NifB inference protein motif:TFAM:TIGR00539 db_xref GO:0004109 db_xref InterPro:IPR004559 db_xref InterPro:IPR006638 db_xref InterPro:IPR007197 db_xref InterPro:IPR010723 4137671 4137054 gene locus_tag Alide2_3976 4137671 4137054 CDS product Nucleoside-triphosphatase rdgB EC_number 3.6.1.15 transl_table 11 protein_id gb|AEB86295.1||gnl|jgi|Alide2_3976 note PFAM: Ham1-like protein~TIGRFAM: Ham1-like protein~HAMAP: Nucleoside-triphosphatase~KEGG: dia:Dtpsy_0857 putative deoxyribonucleotide triphosphate pyrophosphatase inference protein motif:HAMAP:MF_01405 db_xref InterPro:IPR002637 db_xref InterPro:IPR020922 4138454 4137717 gene locus_tag Alide2_3977 4138454 4137717 CDS product Ribonuclease PH EC_number 2.7.7.56 transl_table 11 protein_id gb|AEB86296.1||gnl|jgi|Alide2_3977 note PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2~TIGRFAM: Ribonuclease phosphorolytic, bacterial-type~HAMAP: Ribonuclease phosphorolytic, bacterial-type~KEGG: dia:Dtpsy_0858 ribonuclease PH inference protein motif:HAMAP:MF_00564 db_xref InterPro:IPR001247 db_xref InterPro:IPR002381 db_xref InterPro:IPR015847 4139424 4138522 gene locus_tag Alide2_3978 4139424 4138522 CDS product protein serine/threonine phosphatase transl_table 11 protein_id gb|AEB86297.1||gnl|jgi|Alide2_3978 note KEGG: dia:Dtpsy_0859 protein serine/threonine phosphatase~PFAM: Sporulation stage II, protein E C-terminal~SMART: Protein phosphatase 2C-like inference protein motif:PFAM:PF07228 db_xref GO:0004721 db_xref InterPro:IPR001932 db_xref InterPro:IPR010822 4140494 4139421 gene locus_tag Alide2_3979 4140494 4139421 CDS product serine/threonine protein kinase transl_table 11 protein_id gb|AEB86298.1||gnl|jgi|Alide2_3979 note KEGG: dia:Dtpsy_0860 serine/threonine protein kinase~PFAM: Serine/threonine-protein kinase-like domain~SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, catalytic domain inference protein motif:PFAM:PF00069 db_xref GO:0004672 db_xref GO:0005524 db_xref InterPro:IPR002290 db_xref InterPro:IPR017442 db_xref InterPro:IPR020635 4140533 4141426 gene locus_tag Alide2_3980 4140533 4141426 CDS product Conserved hypothetical protein CHP00255 transl_table 11 protein_id gb|AEB86299.1||gnl|jgi|Alide2_3980 note KEGG: ajs:Ajs_0926 hypothetical protein~TIGRFAM: Conserved hypothetical protein CHP00255~PFAM: Domain of unknown function DUF1732; YicC-like, N-terminal inference protein motif:TFAM:TIGR00255 db_xref InterPro:IPR005229 db_xref InterPro:IPR013527 db_xref InterPro:IPR013551 4144895 4141458 gene locus_tag Alide2_3981 4144895 4141458 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86300.1||gnl|jgi|Alide2_3981 note KEGG: cag:Cagg_1487 hypothetical protein inference similar to AA sequence:KEGG:Cagg_1487 4147213 4144916 gene locus_tag Alide2_3982 4147213 4144916 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86301.1||gnl|jgi|Alide2_3982 note KEGG: cag:Cagg_1488 hypothetical protein inference similar to AA sequence:KEGG:Cagg_1488 4150125 4147210 gene locus_tag Alide2_3983 4150125 4147210 CDS product Conserved hypothetical protein CHP02243 transl_table 11 protein_id gb|AEB86302.1||gnl|jgi|Alide2_3983 note TIGRFAM: Conserved hypothetical protein CHP02243~KEGG: bra:BRADO4376 hypothetical protein inference protein motif:TFAM:TIGR02243 db_xref InterPro:IPR011749 4152605 4150122 gene locus_tag Alide2_3984 4152605 4150122 CDS product Conserved hypothetical protein CHP02243 transl_table 11 protein_id gb|AEB86303.1||gnl|jgi|Alide2_3984 note TIGRFAM: Conserved hypothetical protein CHP02243~KEGG: chl:Chy400_2341 hypothetical protein inference protein motif:TFAM:TIGR02243 db_xref InterPro:IPR011749 4152970 4152602 gene locus_tag Alide2_3985 4152970 4152602 CDS product GPW/gp25 family protein transl_table 11 protein_id gb|AEB86304.1||gnl|jgi|Alide2_3985 note PFAM: GPW/gp25~KEGG: cag:Cagg_1491 gpW/GP25 family protein inference protein motif:PFAM:PF04965 db_xref InterPro:IPR007048 4153294 4152974 gene locus_tag Alide2_3986 4153294 4152974 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86305.1||gnl|jgi|Alide2_3986 note KEGG: aba:Acid345_0852 hypothetical protein inference similar to AA sequence:KEGG:Acid345_0852 4153814 4153305 gene locus_tag Alide2_3987 4153814 4153305 CDS product baseplate assembly protein V transl_table 11 protein_id gb|AEB86306.1||gnl|jgi|Alide2_3987 note PFAM: Phage baseplate assembly protein V~KEGG: nde:NIDE2232 hypothetical protein inference protein motif:PFAM:PF04717 db_xref InterPro:IPR006531 4154968 4153826 gene locus_tag Alide2_3988 4154968 4153826 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86307.1||gnl|jgi|Alide2_3988 note KEGG: nde:NIDE2231 hypothetical protein inference similar to AA sequence:KEGG:NIDE2231 4155333 4154971 gene locus_tag Alide2_3989 4155333 4154971 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86308.1||gnl|jgi|Alide2_3989 note KEGG: aba:Acid345_0855 hypothetical protein inference similar to AA sequence:KEGG:Acid345_0855 4155992 4155336 gene locus_tag Alide2_3990 4155992 4155336 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86309.1||gnl|jgi|Alide2_3990 note KEGG: nde:NIDE2229 hypothetical protein inference similar to AA sequence:KEGG:NIDE2229 4157364 4156009 gene locus_tag Alide2_3991 4157364 4156009 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86310.1||gnl|jgi|Alide2_3991 note KEGG: scl:sce1839 hypothetical protein inference similar to AA sequence:KEGG:sce1839 4157806 4157540 gene locus_tag Alide2_3992 4157806 4157540 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86311.1||gnl|jgi|Alide2_3992 inference ab initio prediction:Prodigal:1.4 4160340 4157803 gene locus_tag Alide2_3993 4160340 4157803 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86312.1||gnl|jgi|Alide2_3993 note KEGG: scl:sce2110 hypothetical protein inference similar to AA sequence:KEGG:sce2110 4162277 4160337 gene locus_tag Alide2_3994 4162277 4160337 CDS product AAA ATPase central domain protein transl_table 11 protein_id gb|AEB86313.1||gnl|jgi|Alide2_3994 note KEGG: nde:NIDE2224 putative ATPase~PFAM: ATPase, AAA-type, core~SMART: ATPase, AAA+ type, core inference protein motif:PFAM:PF00004 db_xref GO:0005524 db_xref InterPro:IPR003593 db_xref InterPro:IPR003959 4163611 4162274 gene locus_tag Alide2_3995 4163611 4162274 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86314.1||gnl|jgi|Alide2_3995 note KEGG: nde:NIDE2223 hypothetical protein inference similar to AA sequence:KEGG:NIDE2223 4164348 4163608 gene locus_tag Alide2_3996 4164348 4163608 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86315.1||gnl|jgi|Alide2_3996 note KEGG: dre:100006405 hypothetical LOC100006405 inference similar to AA sequence:KEGG:100006405 4165064 4164345 gene locus_tag Alide2_3997 4165064 4164345 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86316.1||gnl|jgi|Alide2_3997 note KEGG: scl:sce2087 hypothetical protein inference similar to AA sequence:KEGG:sce2087 4165605 4165081 gene locus_tag Alide2_3998 4165605 4165081 CDS product Conserved hypothetical protein CHP02241, phage tail region protein transl_table 11 protein_id gb|AEB86317.1||gnl|jgi|Alide2_3998 note KEGG: cag:Cagg_1504 hypothetical protein~TIGRFAM: Conserved hypothetical protein CHP02241, phage tail region protein~PFAM: Bacteriophage T4, Gp19, tail tube inference protein motif:TFAM:TIGR02241 db_xref InterPro:IPR010667 db_xref InterPro:IPR011747 4167513 4165621 gene locus_tag Alide2_3999 4167513 4165621 CDS product phage tail sheath protein transl_table 11 protein_id gb|AEB86318.1||gnl|jgi|Alide2_3999 note KEGG: nha:Nham_0832 phage tail sheath protein inference similar to AA sequence:KEGG:Nham_0832 db_xref InterPro:IPR007067 4167905 4168525 gene locus_tag Alide2_4000 4167905 4168525 CDS product guanylate kinase EC_number 2.7.4.8 transl_table 11 protein_id gb|AEB86319.1||gnl|jgi|Alide2_4000 note SMART: Guanylate kinase/L-type calcium channel~TIGRFAM: Guanylate kinase, sub-group~KEGG: dia:Dtpsy_0862 guanylate kinase~PFAM: Guanylate kinase inference protein motif:TFAM:TIGR03263 db_xref GO:0004385 db_xref InterPro:IPR008144 db_xref InterPro:IPR008145 db_xref InterPro:IPR017665 4168545 4168748 gene locus_tag Alide2_4001 4168545 4168748 CDS product DNA-directed RNA polymerase subunit omega transl_table 11 protein_id gb|AEB86320.1||gnl|jgi|Alide2_4001 note TIGRFAM: DNA-directed RNA polymerase, omega subunit~HAMAP: DNA-directed RNA polymerase, omega subunit~KEGG: dia:Dtpsy_0863 DNA-directed RNA polymerase subunit omega~PFAM: RNA polymerase, subunit omega/K/RPABC2 inference protein motif:HAMAP:MF_00366 db_xref InterPro:IPR003716 db_xref InterPro:IPR006110 4168849 4171113 gene locus_tag Alide2_4002 4168849 4171113 CDS product (p)ppGpp synthetase I, SpoT/RelA EC_number 2.7.6.5 transl_table 11 protein_id gb|AEB86321.1||gnl|jgi|Alide2_4002 note KEGG: dia:Dtpsy_0864 (p)ppGpp synthetase I, SpoT/RelA~PFAM: RelA/SpoT; TGS; Amino acid-binding ACT; Metal-dependent phosphohydrolase, HD subdomain~manually curated~TIGRFAM: RelA/SpoT protein~SMART: RelA/SpoT; Metal-dependent phosphohydrolase, HD domain inference protein motif:TFAM:TIGR00691 db_xref InterPro:IPR002912 db_xref InterPro:IPR003607 db_xref InterPro:IPR004095 db_xref InterPro:IPR004811 db_xref InterPro:IPR006674 db_xref InterPro:IPR007685 4171686 4171120 gene locus_tag Alide2_4003 4171686 4171120 CDS product transcription elongation factor GreB transl_table 11 protein_id gb|AEB86322.1||gnl|jgi|Alide2_4003 note TIGRFAM: Transcription elongation factor GreB~HAMAP: Transcription elongation factor greA~KEGG: ajs:Ajs_0950 transcription elongation factor GreB~PFAM: Transcription elongation factor, GreA/GreB, N-terminal; Transcription elongation factor, GreA/GreB, C-terminal inference protein motif:HAMAP:MF_00105 db_xref InterPro:IPR001437 db_xref InterPro:IPR006358 db_xref InterPro:IPR022691 4171861 4171785 gene locus_tag Alide2_R0054 note tRNA-Arg3 4171861 4171785 tRNA product tRNA-Arg 4172293 4172015 gene locus_tag Alide2_4004 4172293 4172015 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86323.1||gnl|jgi|Alide2_4004 note KEGG: dia:Dtpsy_0866 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_0866 4172418 4172774 gene locus_tag Alide2_4005 4172418 4172774 CDS product ribosomal protein S15 transl_table 11 protein_id gb|AEB86324.1||gnl|jgi|Alide2_4005 note KEGG: xtr:100487598 30S ribosomal protein S15-like~TIGRFAM: Ribosomal protein S15, bacterial-type~PFAM: Ribosomal protein S15 inference protein motif:TFAM:TIGR00952 db_xref GO:0003735 db_xref InterPro:IPR000589 db_xref InterPro:IPR005290 4173005 4175200 gene locus_tag Alide2_4006 4173005 4175200 CDS product polyribonucleotide nucleotidyltransferase EC_number 2.7.7.8 transl_table 11 protein_id gb|AEB86325.1||gnl|jgi|Alide2_4006 note SMART: RNA-binding domain, S1; K Homology~TIGRFAM: Polyribonucleotide nucleotidyltransferase~KEGG: ctt:CtCNB1_1057 3' exoribonuclease~PFAM: Exoribonuclease, phosphorolytic domain 1; Ribosomal protein S1, RNA-binding domain; Exoribonuclease, phosphorolytic domain 2; K Homology, type 1, subgroup; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type inference protein motif:TFAM:TIGR03591 db_xref GO:0003723 db_xref GO:0004654 db_xref InterPro:IPR001247 db_xref InterPro:IPR003029 db_xref InterPro:IPR004087 db_xref InterPro:IPR012162 db_xref InterPro:IPR015847 db_xref InterPro:IPR015848 db_xref InterPro:IPR018111 db_xref InterPro:IPR022967 4175311 4176315 gene locus_tag Alide2_4007 4175311 4176315 CDS product NAD(P)H quinone oxidoreductase, PIG3 family EC_number 1.6.5.5 transl_table 11 protein_id gb|AEB86326.1||gnl|jgi|Alide2_4007 note TIGRFAM: Quinone oxidoreductase putative, PIG3~KEGG: dia:Dtpsy_0869 NAD(P)H quinone oxidoreductase, PIG3 family~PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like inference protein motif:TFAM:TIGR02824 db_xref InterPro:IPR013149 db_xref InterPro:IPR013154 db_xref InterPro:IPR014189 4176303 4177106 gene locus_tag Alide2_4008 4176303 4177106 CDS product triosephosphate isomerase EC_number 5.3.1.1 transl_table 11 protein_id gb|AEB86327.1||gnl|jgi|Alide2_4008 note TIGRFAM: Triosephosphate isomerase~KEGG: dia:Dtpsy_0870 triosephosphate isomerase~PFAM: Triosephosphate isomerase inference protein motif:TFAM:TIGR00419 db_xref GO:0004807 db_xref InterPro:IPR000652 4177103 4177468 gene locus_tag Alide2_4009 4177103 4177468 CDS product preprotein translocase, SecG subunit transl_table 11 protein_id gb|AEB86328.1||gnl|jgi|Alide2_4009 note KEGG: dia:Dtpsy_0871 preprotein translocase, SecG subunit~TIGRFAM: Preprotein translocase SecG subunit~PFAM: Preprotein translocase SecG subunit inference protein motif:TFAM:TIGR00810 db_xref GO:0015450 db_xref InterPro:IPR004692 4177598 4177682 gene locus_tag Alide2_R0055 note tRNA-Leu2 4177598 4177682 tRNA product tRNA-Leu 4177727 4178116 gene locus_tag Alide2_4010 4177727 4178116 CDS product NAD(P)H-quinone oxidoreductase subunit 3 transl_table 11 protein_id gb|AEB86329.1||gnl|jgi|Alide2_4010 note KEGG: ajs:Ajs_0957 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3~HAMAP: NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid~PFAM: NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 inference protein motif:HAMAP:MF_01394 db_xref InterPro:IPR000440 db_xref InterPro:IPR023043 4178153 4178632 gene locus_tag Alide2_4011 4178153 4178632 CDS product NADH-quinone oxidoreductase, B subunit EC_number 1.6.99.5 transl_table 11 protein_id gb|AEB86330.1||gnl|jgi|Alide2_4011 note TIGRFAM: NADH-ubiquinone oxidoreductase, 20 Kd subunit~KEGG: dia:Dtpsy_0873 NADH dehydrogenase subunit B~PFAM: NADH:ubiquinone oxidoreductase-like, 20kDa subunit inference protein motif:TFAM:TIGR01957 db_xref GO:0008137 db_xref GO:0048038 db_xref InterPro:IPR006137 db_xref InterPro:IPR006138 4178642 4179250 gene locus_tag Alide2_4012 4178642 4179250 CDS product NADH (or F420H2) dehydrogenase, subunit C transl_table 11 protein_id gb|AEB86331.1||gnl|jgi|Alide2_4012 note KEGG: aav:Aave_1265 NADH (or F420H2) dehydrogenase, subunit C~TIGRFAM: NADH dehydrogenase, subunit C~PFAM: NADH:ubiquinone oxidoreductase, 30kDa subunit inference protein motif:TFAM:TIGR01961 db_xref GO:0008137 db_xref InterPro:IPR001268 db_xref InterPro:IPR010218 4179278 4180531 gene locus_tag Alide2_4013 4179278 4180531 CDS product NADH dehydrogenase I, D subunit EC_number 1.6.99.5 transl_table 11 protein_id gb|AEB86332.1||gnl|jgi|Alide2_4013 note TIGRFAM: NADH dehydrogenase I, subunit D~KEGG: dia:Dtpsy_0875 NADH dehydrogenase subunit D~PFAM: NADH-quinone oxidoreductase, subunit D inference protein motif:TFAM:TIGR01962 db_xref GO:0051287 db_xref InterPro:IPR001135 db_xref InterPro:IPR010219 4180528 4181019 gene locus_tag Alide2_4014 4180528 4181019 CDS product NADH-quinone oxidoreductase, E subunit EC_number 1.6.99.5 transl_table 11 protein_id gb|AEB86333.1||gnl|jgi|Alide2_4014 note TIGRFAM: NADH:ubiquinone oxidoreductase, 24kDa subunit~KEGG: dia:Dtpsy_0876 NADH-quinone oxidoreductase, E subunit~PFAM: NADH:ubiquinone oxidoreductase, 24kDa subunit inference protein motif:TFAM:TIGR01958 db_xref GO:0016491 db_xref GO:0051287 db_xref InterPro:IPR002023 4181016 4182365 gene locus_tag Alide2_4015 4181016 4182365 CDS product NADH-quinone oxidoreductase, F subunit EC_number 1.6.99.5 transl_table 11 protein_id gb|AEB86334.1||gnl|jgi|Alide2_4015 note SMART: NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding~TIGRFAM: NADH ubiquinone oxidoreductase, F subunit~KEGG: dia:Dtpsy_0877 NADH-quinone oxidoreductase, F subunit~PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding inference protein motif:TFAM:TIGR01959 db_xref GO:0010181 db_xref GO:0051287 db_xref InterPro:IPR011537 db_xref InterPro:IPR011538 db_xref InterPro:IPR019554 db_xref InterPro:IPR019575 4182381 4184501 gene locus_tag Alide2_4016 4182381 4184501 CDS product NADH-quinone oxidoreductase, chain G EC_number 1.6.99.3 transl_table 11 protein_id gb|AEB86335.1||gnl|jgi|Alide2_4016 note SMART: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding~TIGRFAM: NADH:ubiquinone oxidoreductase, subunit G~KEGG: aav:Aave_1269 NADH dehydrogenase subunit G~PFAM: Molybdopterin oxidoreductase; Ferredoxin; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding inference protein motif:TFAM:TIGR01973 db_xref GO:0016491 db_xref GO:0051536 db_xref InterPro:IPR001041 db_xref InterPro:IPR006656 db_xref InterPro:IPR010228 db_xref InterPro:IPR019574 4184498 4185574 gene locus_tag Alide2_4017 4184498 4185574 CDS product NADH dehydrogenase (quinone) EC_number 1.6.99.5 transl_table 11 protein_id gb|AEB86336.1||gnl|jgi|Alide2_4017 note KEGG: dia:Dtpsy_0879 NADH dehydrogenase (quinone)~PFAM: NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H inference protein motif:PRIAM:1.6.99.5 db_xref InterPro:IPR001694 4185591 4186103 gene locus_tag Alide2_4018 4185591 4186103 CDS product NAD(P)H-quinone oxidoreductase subunit I EC_number 1.6.99.3 transl_table 11 protein_id gb|AEB86337.1||gnl|jgi|Alide2_4018 note PFAM: 4Fe-4S binding domain~TIGRFAM: NADH-quinone oxidoreductase, chain I~HAMAP: NADH-quinone oxidoreductase, chain I~KEGG: dia:Dtpsy_0880 NADH dehydrogenase subunit I inference protein motif:HAMAP:MF_01351 db_xref InterPro:IPR001450 db_xref InterPro:IPR010226 4186145 4186813 gene locus_tag Alide2_4019 4186145 4186813 CDS product NADH-ubiquinone/plastoquinone oxidoreductase chain 6 transl_table 11 protein_id gb|AEB86338.1||gnl|jgi|Alide2_4019 note PFAM: NADH:ubiquinone/plastoquinone oxidoreductase, chain 6~KEGG: dia:Dtpsy_0881 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 inference protein motif:PFAM:PF00499 db_xref GO:0008137 db_xref InterPro:IPR001457 4186810 4187118 gene locus_tag Alide2_4020 4186810 4187118 CDS product NADH-ubiquinone oxidoreductase chain 4L transl_table 11 protein_id gb|AEB86339.1||gnl|jgi|Alide2_4020 note PFAM: NADH-ubiquinone oxidoreductase chain 4L/K~KEGG: dia:Dtpsy_0882 NADH-ubiquinone oxidoreductase chain 4L inference protein motif:PFAM:PF00420 db_xref GO:0051287 db_xref InterPro:IPR001133 4187175 4189184 gene locus_tag Alide2_4021 4187175 4189184 CDS product proton-translocating NADH-quinone oxidoreductase, chain L EC_number 1.6.99.5 transl_table 11 protein_id gb|AEB86340.1||gnl|jgi|Alide2_4021 note TIGRFAM: NADH-plastoquinone oxidoreductase, chain 5~KEGG: dia:Dtpsy_0883 proton-translocating NADH-quinone oxidoreductase, chain L~PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal inference protein motif:TFAM:TIGR01974 db_xref GO:0008137 db_xref InterPro:IPR001516 db_xref InterPro:IPR001750 db_xref InterPro:IPR003945 4189198 4190673 gene locus_tag Alide2_4022 4189198 4190673 CDS product proton-translocating NADH-quinone oxidoreductase, chain M EC_number 1.6.99.5 transl_table 11 protein_id gb|AEB86341.1||gnl|jgi|Alide2_4022 note TIGRFAM: NADH-quinone oxidoreductase, chain M/4~KEGG: dia:Dtpsy_0884 proton-translocating NADH-quinone oxidoreductase, chain M~PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NADH:ubiquinone oxidoreductase, chain 4, N-terminal inference protein motif:TFAM:TIGR01972 db_xref GO:0008137 db_xref InterPro:IPR000260 db_xref InterPro:IPR001750 db_xref InterPro:IPR010227 4190695 4192191 gene locus_tag Alide2_4023 4190695 4192191 CDS product proton-translocating NADH-quinone oxidoreductase, chain N EC_number 1.6.99.5 transl_table 11 protein_id gb|AEB86342.1||gnl|jgi|Alide2_4023 note TIGRFAM: NAD(P)H-quinone oxidoreductase, subunit N/subunit 2~KEGG: dia:Dtpsy_0885 NADH dehydrogenase subunit N~PFAM: NADH:ubiquinone/plastoquinone oxidoreductase inference protein motif:TFAM:TIGR01770 db_xref GO:0008137 db_xref InterPro:IPR001750 db_xref InterPro:IPR010096 4192211 4192528 gene locus_tag Alide2_4024 4192211 4192528 CDS product Uncharacterized conserved protein UCP019883, membrane transl_table 11 protein_id gb|AEB86343.1||gnl|jgi|Alide2_4024 note PFAM: Uncharacterised conserved protein UCP019883, membrane~KEGG: dia:Dtpsy_0886 putative transmembrane protein inference protein motif:PFAM:PF10993 db_xref InterPro:IPR016768 4192539 4193003 gene locus_tag Alide2_4025 4192539 4193003 CDS product protein of unknown function DUF1178 transl_table 11 protein_id gb|AEB86344.1||gnl|jgi|Alide2_4025 note KEGG: dia:Dtpsy_0887 protein of unknown function DUF1178~manually curated~PFAM: Protein of unknown function DUF1178 inference protein motif:PFAM:PF06676 db_xref InterPro:IPR009562 4193378 4193010 gene locus_tag Alide2_4026 4193378 4193010 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86345.1||gnl|jgi|Alide2_4026 note KEGG: ajs:Ajs_0974 hypothetical protein inference similar to AA sequence:KEGG:Ajs_0974 4194840 4193422 gene locus_tag Alide2_4027 4194840 4193422 CDS product Glutamate dehydrogenase (NADP(+)) EC_number 1.4.1.4 transl_table 11 protein_id gb|AEB86346.1||gnl|jgi|Alide2_4027 note PFAM: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain~KEGG: ajs:Ajs_0977 glutamate dehydrogenase~SMART: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal inference protein motif:PRIAM:1.4.1.4 db_xref InterPro:IPR006096 db_xref InterPro:IPR006097 4197037 4195073 gene locus_tag Alide2_4028 4197037 4195073 CDS product DNA mismatch repair protein mutL transl_table 11 protein_id gb|AEB86347.1||gnl|jgi|Alide2_4028 note SMART: MutL, C-terminal, dimerisation~TIGRFAM: DNA mismatch repair protein, N-terminal~KEGG: ajs:Ajs_0978 DNA mismatch repair protein MutL~HAMAP: DNA mismatch repair protein, MutL~PFAM: MutL, C-terminal, dimerisation; DNA mismatch repair protein, C-terminal; ATPase-like, ATP-binding domain inference protein motif:HAMAP:MF_00149 db_xref InterPro:IPR003594 db_xref InterPro:IPR013507 db_xref InterPro:IPR014763 db_xref InterPro:IPR014790 db_xref InterPro:IPR020667 4197299 4197045 gene locus_tag Alide2_4029 4197299 4197045 CDS product 17 kDa surface antigen transl_table 11 protein_id gb|AEB86348.1||gnl|jgi|Alide2_4029 note KEGG: dia:Dtpsy_0894 17 kDa surface antigen inference similar to AA sequence:KEGG:Dtpsy_0894 4197513 4198160 gene locus_tag Alide2_4030 4197513 4198160 CDS product SNARE associated Golgi protein-like protein transl_table 11 protein_id gb|AEB86349.1||gnl|jgi|Alide2_4030 note PFAM: SNARE associated Golgi protein~KEGG: dia:Dtpsy_1467 SNARE associated Golgi protein inference protein motif:PFAM:PF09335 db_xref InterPro:IPR015414 4199444 4198164 gene locus_tag Alide2_4031 4199444 4198164 CDS product guanine deaminase EC_number 3.5.4.3 transl_table 11 protein_id gb|AEB86350.1||gnl|jgi|Alide2_4031 note TIGRFAM: Guanine deaminase~KEGG: vap:Vapar_3881 guanine deaminase~PFAM: Amidohydrolase 1 inference protein motif:TFAM:TIGR02967 db_xref GO:0008270 db_xref GO:0008892 db_xref InterPro:IPR006680 db_xref InterPro:IPR014311 4200804 4199449 gene locus_tag Alide2_4032 4200804 4199449 CDS product Xanthine/uracil/vitamin C permease transl_table 11 protein_id gb|AEB86351.1||gnl|jgi|Alide2_4032 note PFAM: Xanthine/uracil/vitamin C permease~KEGG: dac:Daci_5908 xanthine/uracil/vitamin C permease inference protein motif:PFAM:PF00860 db_xref GO:0005215 db_xref InterPro:IPR006043 4201856 4200801 gene locus_tag Alide2_4033 4201856 4200801 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB86352.1||gnl|jgi|Alide2_4033 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: vap:Vapar_3905 transcriptional regulator, LysR family inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 4204282 4201853 gene locus_tag Alide2_4034 4204282 4201853 CDS product xanthine dehydrogenase, molybdopterin binding subunit EC_number 1.17.1.4 transl_table 11 protein_id gb|AEB86353.1||gnl|jgi|Alide2_4034 note TIGRFAM: Xanthine dehydrogenase, molybdopterin binding subunit~KEGG: vap:Vapar_3906 xanthine dehydrogenase, molybdopterin binding subunit~PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead inference protein motif:TFAM:TIGR02965 db_xref GO:0004854 db_xref GO:0004855 db_xref GO:0030151 db_xref GO:0050660 db_xref InterPro:IPR000674 db_xref InterPro:IPR008274 db_xref InterPro:IPR014309 4205851 4204292 gene locus_tag Alide2_4035 4205851 4204292 CDS product xanthine dehydrogenase, small subunit EC_number 1.17.3.2 transl_table 11 protein_id gb|AEB86354.1||gnl|jgi|Alide2_4035 note TIGRFAM: Xanthine dehydrogenase, small subunit~KEGG: dac:Daci_5910 xanthine dehydrogenase small subunit~PFAM: Molybdopterin dehydrogenase, FAD-binding; [2Fe-2S]-binding; CO dehydrogenase flavoprotein, C-terminal inference protein motif:TFAM:TIGR02963 db_xref GO:0004854 db_xref GO:0004855 db_xref GO:0050660 db_xref InterPro:IPR002346 db_xref InterPro:IPR002888 db_xref InterPro:IPR005107 db_xref InterPro:IPR014307 4206396 4206061 gene locus_tag Alide2_4036 4206396 4206061 CDS product Cupin 2 conserved barrel domain protein transl_table 11 protein_id gb|AEB86355.1||gnl|jgi|Alide2_4036 note PFAM: Cupin 2, conserved barrel~KEGG: har:HEAR2969 hypothetical protein inference protein motif:PFAM:PF07883 db_xref InterPro:IPR013096 4207827 4206421 gene locus_tag Alide2_4037 4207827 4206421 CDS product cell wall hydrolase/autolysin transl_table 11 protein_id gb|AEB86356.1||gnl|jgi|Alide2_4037 note KEGG: ajs:Ajs_0983 N-acetylmuramoyl-L-alanine amidase~PFAM: Cell wall hydrolase/autolysin, catalytic~SMART: Cell wall hydrolase/autolysin, catalytic inference protein motif:PFAM:PF01520 db_xref GO:0008745 db_xref InterPro:IPR002508 4208333 4207824 gene locus_tag Alide2_4038 4208333 4207824 CDS product Uncharacterized protein family UPF0079, ATPase transl_table 11 protein_id gb|AEB86357.1||gnl|jgi|Alide2_4038 note manually curated~TIGRFAM: Uncharacterised protein family UPF0079, ATPase bacteria~KEGG: dia:Dtpsy_0899 protein of unknown function UPF0079~PFAM: Uncharacterised protein family UPF0079, ATPase bacteria inference protein motif:TFAM:TIGR00150 db_xref InterPro:IPR003442 4208427 4209398 gene locus_tag Alide2_4039 4208427 4209398 CDS product iron-sulfur cluster binding protein transl_table 11 protein_id gb|AEB86358.1||gnl|jgi|Alide2_4039 note manually curated~TIGRFAM: 4Fe-4S cluster binding~KEGG: xtr:100492313 putative electron transport protein yjeS-like~PFAM: Domain of unknown function DUF1730; 4Fe-4S binding domain inference protein motif:TFAM:TIGR00276 db_xref InterPro:IPR001450 db_xref InterPro:IPR004453 db_xref InterPro:IPR013542 4210374 4209457 gene locus_tag Alide2_4040 4210374 4209457 CDS product Auxin Efflux Carrier transl_table 11 protein_id gb|AEB86359.1||gnl|jgi|Alide2_4040 note PFAM: Auxin efflux carrier~KEGG: dia:Dtpsy_0901 auxin efflux carrier inference protein motif:PFAM:PF03547 db_xref InterPro:IPR004776 4210567 4211532 gene locus_tag Alide2_4041 4210567 4211532 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86360.1||gnl|jgi|Alide2_4041 note KEGG: dia:Dtpsy_0902 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_0902 db_xref InterPro:IPR005064 4211580 4212479 gene locus_tag Alide2_4042 4211580 4212479 CDS product Tyrosine recombinase xerC transl_table 11 protein_id gb|AEB86361.1||gnl|jgi|Alide2_4042 note TIGRFAM: Tyrosine recombinase XerD~HAMAP: Tyrosine recombinase xerC; Tyrosine recombinase XerD~KEGG: dia:Dtpsy_0903 tyrosine recombinase XerD~PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage inference protein motif:HAMAP:MF_01808 db_xref InterPro:IPR002104 db_xref InterPro:IPR004107 db_xref InterPro:IPR011932 4212776 4213597 gene locus_tag Alide2_4043 4212776 4213597 CDS product Methyltransferase type 11 transl_table 11 protein_id gb|AEB86362.1||gnl|jgi|Alide2_4043 note PFAM: Methyltransferase type 11~KEGG: acp:A2cp1_1683 methyltransferase type 11 inference protein motif:PFAM:PF08241 db_xref GO:0008168 db_xref InterPro:IPR013216 4215456 4213609 gene locus_tag Alide2_4044 4215456 4213609 CDS product thiamine biosynthesis protein ThiC transl_table 11 protein_id gb|AEB86363.1||gnl|jgi|Alide2_4044 note KEGG: dia:Dtpsy_2971 thiamine biosynthesis protein ThiC~TIGRFAM: Thiamine biosynthesis protein ThiC~PFAM: Thiamine biosynthesis protein ThiC inference protein motif:TFAM:TIGR00190 db_xref InterPro:IPR002817 4215653 4215543 misc_binding note TPP riboswitch (THI element) as predicted by Rfam (RF00059), score 57.09 bound_moiety thiamin/thiaminpyrophosphate 4215869 4215693 gene locus_tag Alide2_4045 4215869 4215693 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86364.1||gnl|jgi|Alide2_4045 note KEGG: dia:Dtpsy_2972 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_2972 4216802 4215879 gene locus_tag Alide2_4046 4216802 4215879 CDS product UDP-3-0-acyl N-acetylglucosamine deacetylase transl_table 11 protein_id gb|AEB86365.1||gnl|jgi|Alide2_4046 note KEGG: dia:Dtpsy_2973 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase~TIGRFAM: UDP-3-O-acyl N-acetylglucosamine deacetylase~PFAM: UDP-3-O-acyl N-acetylglucosamine deacetylase inference protein motif:TFAM:TIGR00325 db_xref GO:0008759 db_xref InterPro:IPR004463 4217606 4216842 gene locus_tag Alide2_4047 4217606 4216842 CDS product transcriptional regulator, IclR family transl_table 11 protein_id gb|AEB86366.1||gnl|jgi|Alide2_4047 note KEGG: bav:BAV0211 IclR-family transcriptional regulator~PFAM: Transcription regulator IclR, N-terminal~SMART: Transcription regulator IclR, N-terminal inference protein motif:PFAM:PF09339 db_xref GO:0003677 db_xref InterPro:IPR005471 4217696 4218778 gene locus_tag Alide2_4048 4217696 4218778 CDS product cyclase family protein transl_table 11 protein_id gb|AEB86367.1||gnl|jgi|Alide2_4048 note PFAM: Putative cyclase~KEGG: aav:Aave_3942 hypothetical protein inference protein motif:PFAM:PF04199 db_xref InterPro:IPR007325 4218790 4220508 gene locus_tag Alide2_4049 4218790 4220508 CDS product o-succinylbenzoate--CoA ligase EC_number 6.2.1.26 transl_table 11 protein_id gb|AEB86368.1||gnl|jgi|Alide2_4049 note KEGG: bpt:Bpet0794 acyl-CoA synthetase~PFAM: AMP-dependent synthetase/ligase inference protein motif:PRIAM:6.2.1.26 db_xref InterPro:IPR000873 4220505 4221248 gene locus_tag Alide2_4050 4220505 4221248 CDS product 3-oxoacyl-(acyl-carrier-protein) reductase EC_number 1.1.1.100 transl_table 11 protein_id gb|AEB86369.1||gnl|jgi|Alide2_4050 note KEGG: bbr:BB4035 putative oxidoreductase~PFAM: Short-chain dehydrogenase/reductase SDR inference protein motif:PRIAM:1.1.1.100 db_xref InterPro:IPR002198 4221322 4222527 gene locus_tag Alide2_4051 4221322 4222527 CDS product Extracellular ligand-binding receptor transl_table 11 protein_id gb|AEB86370.1||gnl|jgi|Alide2_4051 note PFAM: Extracellular ligand-binding receptor~KEGG: reu:Reut_B3887 UreA/short-chain amide ABC transporter inference protein motif:PFAM:PF01094 db_xref InterPro:IPR001828 4222544 4223506 gene locus_tag Alide2_4052 4222544 4223506 CDS product exported protein transl_table 11 protein_id gb|AEB86371.1||gnl|jgi|Alide2_4052 note KEGG: bav:BAV0225 exported protein inference similar to AA sequence:KEGG:BAV0225 db_xref InterPro:IPR005064 4223510 4224709 gene locus_tag Alide2_4053 4223510 4224709 CDS product Butyryl-CoA dehydrogenase EC_number 1.3.8.1 transl_table 11 protein_id gb|AEB86372.1||gnl|jgi|Alide2_4053 note KEGG: bav:BAV0226 acyl-CoA dehydrogenase~PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal inference protein motif:PRIAM:1.3.99.2 db_xref InterPro:IPR006090 db_xref InterPro:IPR006091 db_xref InterPro:IPR006092 4226010 4224790 gene locus_tag Alide2_4054 4226010 4224790 CDS product cell division protein FtsZ transl_table 11 protein_id gb|AEB86373.1||gnl|jgi|Alide2_4054 note TIGRFAM: Cell division protein FtsZ, N-terminal~PFAM: Tubulin/FtsZ, GTPase domain~KEGG: dia:Dtpsy_2975 cell division protein FtsZ~SMART: Tubulin/FtsZ, GTPase domain; Tubulin/FtsZ, 2-layer sandwich domain inference protein motif:TFAM:TIGR00065 db_xref GO:0005525 db_xref InterPro:IPR000158 db_xref InterPro:IPR003008 db_xref InterPro:IPR018316 4227411 4226182 gene locus_tag Alide2_4055 4227411 4226182 CDS product cell division protein FtsA transl_table 11 protein_id gb|AEB86374.1||gnl|jgi|Alide2_4055 note TIGRFAM: Cell division protein family FtsA~PFAM: Cell division protein FtsA domain~KEGG: dia:Dtpsy_2976 cell division protein FtsA~SMART: Cell division protein FtsA domain inference protein motif:TFAM:TIGR01174 db_xref InterPro:IPR003494 db_xref InterPro:IPR020823 4228289 4227417 gene locus_tag Alide2_4056 4228289 4227417 CDS product Polypeptide-transport-associated domain protein FtsQ-type transl_table 11 protein_id gb|AEB86375.1||gnl|jgi|Alide2_4056 note PFAM: Polypeptide-transport-associated, FtsQ-type; Cell division protein FtsQ~KEGG: dia:Dtpsy_2977 cell division protein FtsQ inference protein motif:PFAM:PF08478 db_xref InterPro:IPR005548 db_xref InterPro:IPR013685 4229262 4228294 gene locus_tag Alide2_4057 4229262 4228294 CDS product D-alanine/D-alanine ligase EC_number 6.3.2.4 transl_table 11 protein_id gb|AEB86376.1||gnl|jgi|Alide2_4057 note TIGRFAM: D-alanine--D-alanine ligase~KEGG: ajs:Ajs_3668 D-alanine--D-alanine ligase~PFAM: D-alanine--D-alanine ligase, C-terminal; D-alanine--D-alanine ligase, N-terminal inference protein motif:TFAM:TIGR01205 db_xref GO:0008716 db_xref InterPro:IPR005905 db_xref InterPro:IPR011095 db_xref InterPro:IPR011127 4230692 4229259 gene locus_tag Alide2_4058 4230692 4229259 CDS product UDP-N-acetylmuramate/alanine ligase EC_number 6.3.2.8 transl_table 11 protein_id gb|AEB86377.1||gnl|jgi|Alide2_4058 note TIGRFAM: UDP-N-acetylmuramate-alanine ligase~KEGG: dia:Dtpsy_2979 UDP-N-acetylmuramate--L-alanine ligase~PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal inference protein motif:TFAM:TIGR01082 db_xref GO:0005524 db_xref GO:0008763 db_xref InterPro:IPR000713 db_xref InterPro:IPR004101 db_xref InterPro:IPR005758 db_xref InterPro:IPR013221 4231753 4230689 gene locus_tag Alide2_4059 4231753 4230689 CDS product UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase transl_table 11 protein_id gb|AEB86378.1||gnl|jgi|Alide2_4059 note TIGRFAM: N-acetylglucosaminyltransferase, MurG~HAMAP: N-acetylglucosaminyltransferase, MurG~KEGG: aav:Aave_0821 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase~PFAM: Glycosyl transferase, family 28, C-terminal; Glycosyl transferase, family 28 inference protein motif:HAMAP:MF_00033 db_xref InterPro:IPR004276 db_xref InterPro:IPR006009 db_xref InterPro:IPR007235 4233021 4231750 gene locus_tag Alide2_4060 4233021 4231750 CDS product cell division protein FtsW transl_table 11 protein_id gb|AEB86379.1||gnl|jgi|Alide2_4060 note KEGG: ajs:Ajs_3671 cell division protein FtsW~TIGRFAM: Cell division protein FtsW~PFAM: Cell cycle protein inference protein motif:TFAM:TIGR02614 db_xref InterPro:IPR001182 db_xref InterPro:IPR013437 4234799 4233018 gene locus_tag Alide2_4061 4234799 4233018 CDS product UDP-N-acetylmuramoylalanine/D-glutamate ligase transl_table 11 protein_id gb|AEB86380.1||gnl|jgi|Alide2_4061 note KEGG: dia:Dtpsy_2982 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase~TIGRFAM: UDP-N-acetylmuramoylalanine-D-glutamate ligase~PFAM: Mur ligase, central; Mur ligase, C-terminal inference protein motif:TFAM:TIGR01087 db_xref GO:0005524 db_xref GO:0008764 db_xref InterPro:IPR004101 db_xref InterPro:IPR005762 db_xref InterPro:IPR013221 4235974 4234796 gene locus_tag Alide2_4062 4235974 4234796 CDS product phospho-N-acetylmuramoyl-pentapeptide-transferase transl_table 11 protein_id gb|AEB86381.1||gnl|jgi|Alide2_4062 note KEGG: dia:Dtpsy_2983 phospho-N-acetylmuramoyl-pentapeptide-transferase~TIGRFAM: Phospho-N-acetylmuramoyl-pentapeptide transferase~PFAM: Glycosyl transferase, family 4; Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site inference protein motif:TFAM:TIGR00445 db_xref GO:0008963 db_xref InterPro:IPR000715 db_xref InterPro:IPR003524 db_xref InterPro:IPR018480 4237356 4235965 gene locus_tag Alide2_4063 4237356 4235965 CDS product UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase EC_number 6.3.2.10 transl_table 11 protein_id gb|AEB86382.1||gnl|jgi|Alide2_4063 note TIGRFAM: UDP-MurNAc-pentapeptide synthetase~KEGG: ajs:Ajs_3674 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase~PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal inference protein motif:TFAM:TIGR01143 db_xref GO:0005524 db_xref GO:0008766 db_xref InterPro:IPR000713 db_xref InterPro:IPR004101 db_xref InterPro:IPR005863 db_xref InterPro:IPR013221 4238858 4237353 gene locus_tag Alide2_4064 4238858 4237353 CDS product UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase EC_number 6.3.2.13 transl_table 11 protein_id gb|AEB86383.1||gnl|jgi|Alide2_4064 note PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal~TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase~HAMAP: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase~KEGG: dia:Dtpsy_2985 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase inference protein motif:HAMAP:MF_00208 db_xref InterPro:IPR000713 db_xref InterPro:IPR004101 db_xref InterPro:IPR005761 db_xref InterPro:IPR013221 4240603 4238855 gene locus_tag Alide2_4065 4240603 4238855 CDS product Peptidoglycan glycosyltransferase EC_number 2.4.1.129 transl_table 11 protein_id gb|AEB86384.1||gnl|jgi|Alide2_4065 note KEGG: dia:Dtpsy_2986 peptidoglycan glycosyltransferase~PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain inference protein motif:PRIAM:2.4.1.129 db_xref InterPro:IPR001460 db_xref InterPro:IPR005311 4240914 4240600 gene locus_tag Alide2_4066 4240914 4240600 CDS product cell division protein FtsL transl_table 11 protein_id gb|AEB86385.1||gnl|jgi|Alide2_4066 note KEGG: aav:Aave_0814 cell division protein FtsL~TIGRFAM: Cell division protein, FtsL -like~PFAM: Cell division protein FtsL inference protein motif:TFAM:TIGR02209 db_xref InterPro:IPR007082 db_xref InterPro:IPR011922 4241837 4240911 gene locus_tag Alide2_4067 4241837 4240911 CDS product Ribosomal RNA small subunit methyltransferase H transl_table 11 protein_id gb|AEB86386.1||gnl|jgi|Alide2_4067 note TIGRFAM: S-adenosyl-L-methionine-dependent methyltransferase, MraW~HAMAP: S-adenosyl-L-methionine-dependent methyltransferase, MraW~KEGG: dia:Dtpsy_2988 S-adenosyl-methyltransferase MraW~PFAM: S-adenosyl-L-methionine-dependent methyltransferase, MraW inference protein motif:HAMAP:MF_01007 db_xref InterPro:IPR002903 4242275 4241847 gene locus_tag Alide2_4068 4242275 4241847 CDS product Protein mraZ transl_table 11 protein_id gb|AEB86387.1||gnl|jgi|Alide2_4068 note TIGRFAM: MraZ~HAMAP: MraZ~KEGG: dia:Dtpsy_2989 cell division protein MraZ~PFAM: MraZ domain inference protein motif:HAMAP:MF_01008 db_xref InterPro:IPR003444 db_xref InterPro:IPR020603 4243825 4242521 gene locus_tag Alide2_4069 4243825 4242521 CDS product heat shock protein HslVU, ATPase subunit HslU transl_table 11 protein_id gb|AEB86388.1||gnl|jgi|Alide2_4069 note TIGRFAM: Heat shock protein HslU~PFAM: ATPase, AAA-2; ATPase, AAA-type, core; Clp ATPase, C-terminal~KEGG: dia:Dtpsy_2990 ATP-dependent protease ATP-binding subunit HslU~SMART: ATPase, AAA+ type, core inference protein motif:TFAM:TIGR00390 db_xref GO:0005515 db_xref GO:0005524 db_xref GO:0016887 db_xref InterPro:IPR003593 db_xref InterPro:IPR003959 db_xref InterPro:IPR004491 db_xref InterPro:IPR013093 db_xref InterPro:IPR019489 4244457 4243912 gene locus_tag Alide2_4070 4244457 4243912 CDS product ATP-dependent protease HslVU, peptidase subunit transl_table 11 protein_id gb|AEB86389.1||gnl|jgi|Alide2_4070 note KEGG: dia:Dtpsy_2991 ATP-dependent protease peptidase subunit~TIGRFAM: ATP-dependent protease, HslV subunit~PFAM: Proteasome, subunit alpha/beta inference protein motif:TFAM:TIGR03692 db_xref GO:0004298 db_xref InterPro:IPR001353 db_xref InterPro:IPR022281 4246254 4244518 gene locus_tag Alide2_4071 4246254 4244518 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86390.1||gnl|jgi|Alide2_4071 note KEGG: dia:Dtpsy_2992 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_2992 4246777 4246286 gene locus_tag Alide2_4072 4246777 4246286 CDS product transcriptional regulator, TraR/DksA family transl_table 11 protein_id gb|AEB86391.1||gnl|jgi|Alide2_4072 note TIGRFAM: RNA polymerase-binding, DksA~KEGG: dia:Dtpsy_2993 transcriptional regulator, TraR/DksA family inference protein motif:TFAM:TIGR02420 db_xref GO:0008270 db_xref InterPro:IPR000962 db_xref InterPro:IPR012784 4248198 4247128 gene locus_tag Alide2_4073 4248198 4247128 CDS product cobalamin synthesis protein P47K transl_table 11 protein_id gb|AEB86392.1||gnl|jgi|Alide2_4073 note KEGG: dia:Dtpsy_2994 cobalamin synthesis protein P47K~PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal~SMART: Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal inference protein motif:PFAM:PF02492 db_xref InterPro:IPR003495 db_xref InterPro:IPR011629 4248521 4248291 gene locus_tag Alide2_4074 4248521 4248291 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86393.1||gnl|jgi|Alide2_4074 note KEGG: gpb:HDN1F_32180 hypothetical protein inference similar to AA sequence:KEGG:HDN1F_32180 4249423 4248698 gene locus_tag Alide2_4075 4249423 4248698 CDS product response regulator receiver protein transl_table 11 protein_id gb|AEB86394.1||gnl|jgi|Alide2_4075 note KEGG: dac:Daci_1875 response regulator receiver protein~PFAM: Signal transduction response regulator, receiver domain~SMART: Signal transduction response regulator, receiver domain inference protein motif:PFAM:PF00072 db_xref GO:0000156 db_xref InterPro:IPR001789 4250090 4249416 gene locus_tag Alide2_4076 4250090 4249416 CDS product DNA binding domain protein, excisionase family transl_table 11 protein_id gb|AEB86395.1||gnl|jgi|Alide2_4076 note TIGRFAM: Excisionase/Xis, DNA-binding~PFAM: Signal transduction response regulator, receiver domain~KEGG: dac:Daci_1874 response regulator receiver protein~SMART: Signal transduction response regulator, receiver domain inference protein motif:TFAM:TIGR01764 db_xref GO:0003677 db_xref InterPro:IPR001789 db_xref InterPro:IPR010093 4250171 4250557 gene locus_tag Alide2_4077 4250171 4250557 CDS product response regulator receiver protein transl_table 11 protein_id gb|AEB86396.1||gnl|jgi|Alide2_4077 note KEGG: ctt:CtCNB1_1998 response regulator receiver protein~PFAM: Signal transduction response regulator, receiver domain~SMART: Signal transduction response regulator, receiver domain inference protein motif:PFAM:PF00072 db_xref GO:0000156 db_xref InterPro:IPR001789 4250589 4253078 gene locus_tag Alide2_4078 4250589 4253078 CDS product PAS/PAC sensor signal transduction histidine kinase transl_table 11 protein_id gb|AEB86397.1||gnl|jgi|Alide2_4078 note TIGRFAM: PAS~PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS fold-4~KEGG: dac:Daci_0735 PAS/PAC sensor signal transduction histidine kinase~SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS inference protein motif:TFAM:TIGR00229 db_xref GO:0004871 db_xref InterPro:IPR000014 db_xref InterPro:IPR003594 db_xref InterPro:IPR003661 db_xref InterPro:IPR013656 4253789 4253121 gene locus_tag Alide2_4079 4253789 4253121 CDS product DNA binding domain protein, excisionase family transl_table 11 protein_id gb|AEB86398.1||gnl|jgi|Alide2_4079 note TIGRFAM: Excisionase/Xis, DNA-binding~PFAM: Signal transduction response regulator, receiver domain~KEGG: aav:Aave_2239 response regulator receiver protein~SMART: Signal transduction response regulator, receiver domain inference protein motif:TFAM:TIGR01764 db_xref GO:0003677 db_xref InterPro:IPR001789 db_xref InterPro:IPR010093 4253854 4254240 gene locus_tag Alide2_4080 4253854 4254240 CDS product response regulator receiver protein transl_table 11 protein_id gb|AEB86399.1||gnl|jgi|Alide2_4080 note KEGG: lch:Lcho_0734 response regulator receiver protein~PFAM: Signal transduction response regulator, receiver domain~SMART: Signal transduction response regulator, receiver domain inference protein motif:PFAM:PF00072 db_xref GO:0000156 db_xref InterPro:IPR001789 4254237 4255046 gene locus_tag Alide2_4081 4254237 4255046 CDS product metal dependent phosphohydrolase transl_table 11 protein_id gb|AEB86400.1||gnl|jgi|Alide2_4081 note KEGG: dac:Daci_0737 metal dependent phosphohydrolase~PFAM: Metal-dependent phosphohydrolase, HD subdomain~SMART: Metal-dependent phosphohydrolase, HD domain inference protein motif:PFAM:PF01966 db_xref InterPro:IPR003607 db_xref InterPro:IPR006674 4255184 4257262 gene locus_tag Alide2_4082 4255184 4257262 CDS product PAS/PAC sensor signal transduction histidine kinase transl_table 11 protein_id gb|AEB86401.1||gnl|jgi|Alide2_4082 note TIGRFAM: PAS~PFAM: ATPase-like, ATP-binding domain; PAS fold-4; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain~KEGG: dac:Daci_0735 PAS/PAC sensor signal transduction histidine kinase~SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS inference protein motif:TFAM:TIGR00229 db_xref GO:0004871 db_xref InterPro:IPR000014 db_xref InterPro:IPR003594 db_xref InterPro:IPR003661 db_xref InterPro:IPR013656 4257244 4259001 gene locus_tag Alide2_4083 4257244 4259001 CDS product integral membrane sensor signal transduction histidine kinase transl_table 11 protein_id gb|AEB86402.1||gnl|jgi|Alide2_4083 note KEGG: lch:Lcho_4371 histidine kinase~PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain~SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain inference protein motif:PFAM:PF02518 db_xref GO:0000155 db_xref GO:0005524 db_xref InterPro:IPR003594 db_xref InterPro:IPR003661 4259195 4260889 gene locus_tag Alide2_4084 4259195 4260889 CDS product methyl-accepting chemotaxis sensory transducer transl_table 11 protein_id gb|AEB86403.1||gnl|jgi|Alide2_4084 note KEGG: rfr:Rfer_1480 methyl-accepting chemotaxis sensory transducer~PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain~SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain inference protein motif:PFAM:PF00015 db_xref GO:0004871 db_xref InterPro:IPR003660 db_xref InterPro:IPR004089 4261868 4260906 gene locus_tag Alide2_4085 4261868 4260906 CDS product tyrosine recombinase XerC transl_table 11 protein_id gb|AEB86404.1||gnl|jgi|Alide2_4085 note KEGG: dia:Dtpsy_2996 tyrosine recombinase XerC~TIGRFAM: Tyrosine recombinase XerC~PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage inference protein motif:TFAM:TIGR02224 db_xref GO:0003677 db_xref InterPro:IPR002104 db_xref InterPro:IPR004107 db_xref InterPro:IPR011931 4262657 4261962 gene locus_tag Alide2_4086 4262657 4261962 CDS product protein of unknown function DUF484 transl_table 11 protein_id gb|AEB86405.1||gnl|jgi|Alide2_4086 note PFAM: Protein of unknown function DUF484~KEGG: dia:Dtpsy_2997 protein of unknown function DUF484 inference protein motif:PFAM:PF04340 db_xref InterPro:IPR007435 4263532 4262654 gene locus_tag Alide2_4087 4263532 4262654 CDS product Diaminopimelate epimerase transl_table 11 protein_id gb|AEB86406.1||gnl|jgi|Alide2_4087 note TIGRFAM: Diaminopimelate epimerase~HAMAP: Diaminopimelate epimerase~KEGG: dia:Dtpsy_2998 diaminopimelate epimerase~PFAM: Diaminopimelate epimerase inference protein motif:HAMAP:MF_00197 db_xref InterPro:IPR001653 4263608 4265302 gene locus_tag Alide2_4088 4263608 4265302 CDS product beta-lactamase domain protein transl_table 11 protein_id gb|AEB86407.1||gnl|jgi|Alide2_4088 note manually curated~PFAM: Beta-lactamase-like; NUDIX hydrolase domain~KEGG: dia:Dtpsy_3001 beta-lactamase domain protein~SMART: Beta-lactamase-like inference protein motif:PFAM:PF00753 db_xref GO:0016787 db_xref InterPro:IPR000086 db_xref InterPro:IPR001279 4265295 4266020 gene locus_tag Alide2_4089 4265295 4266020 CDS product RNA-binding S4 domain protein transl_table 11 protein_id gb|AEB86408.1||gnl|jgi|Alide2_4089 note KEGG: dia:Dtpsy_3002 RNA-binding S4 domain protein~PFAM: RNA-binding S4~SMART: RNA-binding S4 inference protein motif:PFAM:PF01479 db_xref GO:0003723 db_xref InterPro:IPR002942 4266496 4266063 gene gene rnpB locus_tag Alide2_R0056 4266496 4266063 ncRNA ncRNA_class RNase_P_RNA product RNA component of RNaseP note Bacterial RNase P class A as predicted by Rfam (RF00010), score 150.26 4266739 4266512 gene locus_tag Alide2_4090 4266739 4266512 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86409.1||gnl|jgi|Alide2_4090 note KEGG: ajs:Ajs_3722 hypothetical protein inference similar to AA sequence:KEGG:Ajs_3722 4266849 4267769 gene locus_tag Alide2_4091 4266849 4267769 CDS product cysteine synthase EC_number 2.5.1.47 transl_table 11 protein_id gb|AEB86410.1||gnl|jgi|Alide2_4091 note TIGRFAM: Cysteine synthase K/M; Cysteine synthase A~KEGG: dac:Daci_1442 cysteine synthase~PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit inference protein motif:TFAM:TIGR01136 db_xref GO:0004124 db_xref InterPro:IPR001926 db_xref InterPro:IPR005856 db_xref InterPro:IPR005859 4267800 4268900 gene locus_tag Alide2_4092 4267800 4268900 CDS product heat shock protein DnaJ domain protein transl_table 11 protein_id gb|AEB86411.1||gnl|jgi|Alide2_4092 note PFAM: Heat shock protein DnaJ, N-terminal~KEGG: bvi:Bcep1808_3882 heat shock protein DnaJ domain-containing protein inference protein motif:PFAM:PF00226 db_xref GO:0031072 db_xref InterPro:IPR001623 4269032 4270789 gene locus_tag Alide2_4093 4269032 4270789 CDS product FAD dependent oxidoreductase transl_table 11 protein_id gb|AEB86412.1||gnl|jgi|Alide2_4093 note PFAM: FAD dependent oxidoreductase~KEGG: dia:Dtpsy_3010 FAD dependent oxidoreductase inference protein motif:PFAM:PF01266 db_xref GO:0016491 db_xref InterPro:IPR006076 4270854 4271303 gene locus_tag Alide2_4094 4270854 4271303 CDS product Carboxymuconolactone decarboxylase transl_table 11 protein_id gb|AEB86413.1||gnl|jgi|Alide2_4094 note PFAM: Carboxymuconolactone decarboxylase~KEGG: dac:Daci_0909 carboxymuconolactone decarboxylase inference protein motif:PFAM:PF02627 db_xref InterPro:IPR003779 4272244 4271342 gene locus_tag Alide2_4095 4272244 4271342 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB86414.1||gnl|jgi|Alide2_4095 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: dac:Daci_3510 LysR family transcriptional regulator inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 4272314 4273183 gene locus_tag Alide2_4096 4272314 4273183 CDS product Citryl-CoA lyase EC_number 4.1.3.34 transl_table 11 protein_id gb|AEB86415.1||gnl|jgi|Alide2_4096 note KEGG: xtr:100489146 citrate lyase subunit beta-like~PFAM: Aldehyde-lyase domain inference protein motif:PRIAM:4.1.3.34 db_xref InterPro:IPR005000 4273211 4274188 gene locus_tag Alide2_4097 4273211 4274188 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86416.1||gnl|jgi|Alide2_4097 note KEGG: dac:Daci_3512 hypothetical protein inference similar to AA sequence:KEGG:Daci_3512 db_xref InterPro:IPR005064 4274252 4275421 gene locus_tag Alide2_4098 4274252 4275421 CDS product Formyl-CoA transferase EC_number 2.8.3.16 transl_table 11 protein_id gb|AEB86417.1||gnl|jgi|Alide2_4098 note KEGG: dac:Daci_3513 L-carnitine dehydratase/bile acid-inducible protein F~PFAM: CoA-transferase family III inference protein motif:PRIAM:2.8.3.16 db_xref InterPro:IPR003673 4275418 4276260 gene locus_tag Alide2_4099 4275418 4276260 CDS product amidohydrolase 2 transl_table 11 protein_id gb|AEB86418.1||gnl|jgi|Alide2_4099 note KEGG: dac:Daci_3514 amidohydrolase 2~manually curated~PFAM: Amidohydrolase 2 inference protein motif:PFAM:PF04909 db_xref GO:0003824 db_xref InterPro:IPR006992 4276277 4277233 gene locus_tag Alide2_4100 4276277 4277233 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86419.1||gnl|jgi|Alide2_4100 note KEGG: dac:Daci_3515 hypothetical protein inference similar to AA sequence:KEGG:Daci_3515 db_xref InterPro:IPR005064 4277794 4277288 gene locus_tag Alide2_4101 4277794 4277288 CDS product transcriptional regulator, MarR family transl_table 11 protein_id gb|AEB86420.1||gnl|jgi|Alide2_4101 note KEGG: cti:RALTA_B1490 transcriptional activator of cyclohexanecarboxylate anaerobic degradation; MarR type~PFAM: HTH transcriptional regulator, MarR~SMART: HTH transcriptional regulator, MarR inference protein motif:PFAM:PF01047 db_xref GO:0003700 db_xref InterPro:IPR000835 4277925 4278692 gene locus_tag Alide2_4102 4277925 4278692 CDS product 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase EC_number 1.1.1.100 transl_table 11 protein_id gb|AEB86421.1||gnl|jgi|Alide2_4102 note TIGRFAM: 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase~KEGG: lch:Lcho_1185 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase~PFAM: Short-chain dehydrogenase/reductase SDR inference protein motif:TFAM:TIGR03206 db_xref InterPro:IPR002198 db_xref InterPro:IPR017619 4278735 4279517 gene locus_tag Alide2_4103 4278735 4279517 CDS product 2-ketocyclohexanecarboxyl-CoA hydrolase EC_number 4.1.3.36 transl_table 11 protein_id gb|AEB86422.1||gnl|jgi|Alide2_4103 note TIGRFAM: 2-ketocyclohexanecarboxyl-CoA hydrolase~KEGG: vei:Veis_4105 enoyl-CoA hydratase/isomerase~PFAM: Crotonase, core inference protein motif:TFAM:TIGR03210 db_xref InterPro:IPR001753 db_xref InterPro:IPR017623 4279537 4280694 gene locus_tag Alide2_4104 4279537 4280694 CDS product cyclohexanecarboxyl-CoA dehydrogenase EC_number 1.3.99.10 transl_table 11 protein_id gb|AEB86423.1||gnl|jgi|Alide2_4104 note TIGRFAM: Cyclohexanecarboxyl-CoA dehydrogenase~KEGG: lch:Lcho_1187 cyclohexanecarboxyl-CoA dehydrogenase~PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal inference protein motif:TFAM:TIGR03207 db_xref InterPro:IPR006090 db_xref InterPro:IPR006091 db_xref InterPro:IPR006092 db_xref InterPro:IPR017620 4280730 4282385 gene locus_tag Alide2_4105 4280730 4282385 CDS product cyclohexanecarboxylate-CoA ligase EC_number 6.2.1.26 transl_table 11 protein_id gb|AEB86424.1||gnl|jgi|Alide2_4105 note TIGRFAM: Cyclohexanecarboxylate-CoA ligase~KEGG: pna:Pnap_2126 cyclohexanecarboxylate-CoA ligase~PFAM: AMP-dependent synthetase/ligase inference protein motif:TFAM:TIGR03208 db_xref InterPro:IPR000873 db_xref InterPro:IPR017621 4283418 4282486 gene locus_tag Alide2_4106 4283418 4282486 CDS product Electron transfer flavoprotein alpha subunit transl_table 11 protein_id gb|AEB86425.1||gnl|jgi|Alide2_4106 note KEGG: dia:Dtpsy_2298 electron transfer flavoprotein alpha subunit~PFAM: Electron transfer flavoprotein, alpha subunit, C-terminal; Electron transfer flavoprotein, alpha/beta-subunit, N-terminal~SMART: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal inference protein motif:PFAM:PF00766 db_xref InterPro:IPR014730 db_xref InterPro:IPR014731 4284185 4283436 gene locus_tag Alide2_4107 4284185 4283436 CDS product Electron transfer flavoprotein alpha/beta-subunit transl_table 11 protein_id gb|AEB86426.1||gnl|jgi|Alide2_4107 note KEGG: dia:Dtpsy_3012 electron transfer flavoprotein alpha/beta-subunit~PFAM: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal~SMART: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal inference protein motif:PFAM:PF01012 db_xref InterPro:IPR014730 4285184 4284210 gene locus_tag Alide2_4108 4285184 4284210 CDS product 2-nitropropane dioxygenase NPD transl_table 11 protein_id gb|AEB86427.1||gnl|jgi|Alide2_4108 note PFAM: 2-nitropropane dioxygenase, NPD~KEGG: ajs:Ajs_3732 2-nitropropane dioxygenase, NPD inference protein motif:PFAM:PF03060 db_xref GO:0018580 db_xref InterPro:IPR004136 4286187 4285192 gene locus_tag Alide2_4109 4286187 4285192 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86428.1||gnl|jgi|Alide2_4109 note KEGG: dac:Daci_1400 hypothetical protein inference similar to AA sequence:KEGG:Daci_1400 db_xref InterPro:IPR005064 4287492 4286260 gene locus_tag Alide2_4110 4287492 4286260 CDS product Formyl-CoA transferase EC_number 2.8.3.16 transl_table 11 protein_id gb|AEB86429.1||gnl|jgi|Alide2_4110 note KEGG: ajs:Ajs_3734 L-carnitine dehydratase/bile acid-inducible protein F~PFAM: CoA-transferase family III inference protein motif:PRIAM:2.8.3.16 db_xref InterPro:IPR003673 4287939 4287517 gene locus_tag Alide2_4111 4287939 4287517 CDS product phenylacetic acid degradation-related protein transl_table 11 protein_id gb|AEB86430.1||gnl|jgi|Alide2_4111 note KEGG: mrb:Mrub_0164 thioesterase superfamily protein~TIGRFAM: Phenylacetic acid degradation-related protein~PFAM: Thioesterase superfamily inference protein motif:TFAM:TIGR00369 db_xref InterPro:IPR003736 db_xref InterPro:IPR006683 4288782 4287976 gene locus_tag Alide2_4112 4288782 4287976 CDS product Enoyl-CoA hydratase/isomerase transl_table 11 protein_id gb|AEB86431.1||gnl|jgi|Alide2_4112 note PFAM: Crotonase, core~KEGG: xtr:100494378 probable enoyl-CoA hydratase paaG-like inference protein motif:PFAM:PF00378 db_xref GO:0003824 db_xref InterPro:IPR001753 4290028 4288898 gene locus_tag Alide2_4113 4290028 4288898 CDS product acyl-CoA dehydrogenase domain-containing protein transl_table 11 protein_id gb|AEB86432.1||gnl|jgi|Alide2_4113 note PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain~KEGG: dac:Daci_1396 acyl-CoA dehydrogenase domain-containing protein inference protein motif:PFAM:PF00441 db_xref GO:0003995 db_xref InterPro:IPR006090 db_xref InterPro:IPR006091 db_xref InterPro:IPR006092 4291235 4290039 gene locus_tag Alide2_4114 4291235 4290039 CDS product Isovaleryl-CoA dehydrogenase EC_number 1.3.99.10 transl_table 11 protein_id gb|AEB86433.1||gnl|jgi|Alide2_4114 note KEGG: ajs:Ajs_3737 acyl-CoA dehydrogenase domain-containing protein~PFAM: Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA oxidase/dehydrogenase, type 1 inference protein motif:PRIAM:1.3.99.10 db_xref InterPro:IPR006090 db_xref InterPro:IPR006091 db_xref InterPro:IPR006092 4292447 4291248 gene locus_tag Alide2_4115 4292447 4291248 CDS product acetyl-CoA acetyltransferase EC_number 2.3.1.16 transl_table 11 protein_id gb|AEB86434.1||gnl|jgi|Alide2_4115 note TIGRFAM: Thiolase~KEGG: dia:Dtpsy_3019 acetyl-CoA acetyltransferase~PFAM: Thiolase, C-terminal; Thiolase, N-terminal inference protein motif:TFAM:TIGR01930 db_xref GO:0004124 db_xref InterPro:IPR002155 db_xref InterPro:IPR020616 db_xref InterPro:IPR020617 4294710 4292593 gene locus_tag Alide2_4116 4294710 4292593 CDS product 3-hydroxybutyryl-CoA epimerase EC_number 5.1.2.3 transl_table 11 protein_id gb|AEB86435.1||gnl|jgi|Alide2_4116 note KEGG: dac:Daci_1393 3-hydroxyacyl-CoA dehydrogenase NAD-binding~PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; Crotonase, core; 3-hydroxyacyl-CoA dehydrogenase, C-terminal inference protein motif:PRIAM:5.1.2.3 db_xref InterPro:IPR001753 db_xref InterPro:IPR006108 db_xref InterPro:IPR006176 4294821 4295729 gene locus_tag Alide2_4117 4294821 4295729 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB86436.1||gnl|jgi|Alide2_4117 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: dac:Daci_1392 LysR family transcriptional regulator inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 4295767 4296081 gene locus_tag Alide2_4118 4295767 4296081 CDS product transposase transl_table 11 protein_id gb|AEB86437.1||gnl|jgi|Alide2_4118 note KEGG: bpe:BP0072 transposase inference similar to AA sequence:KEGG:BP0072 4297082 4296168 gene locus_tag Alide2_4119 4297082 4296168 CDS product Integrase catalytic region transl_table 11 protein_id gb|AEB86438.1||gnl|jgi|Alide2_4119 note PFAM: Integrase, catalytic core~KEGG: rpf:Rpic12D_2820 integrase catalytic region inference protein motif:PFAM:PF00665 db_xref GO:0003677 db_xref InterPro:IPR001584 4297402 4297079 gene locus_tag Alide2_4120 4297402 4297079 CDS product transposase IS3/IS911 family protein transl_table 11 protein_id gb|AEB86439.1||gnl|jgi|Alide2_4120 note PFAM: Transposase IS3/IS911family~KEGG: ajs:Ajs_0906 transposase IS3/IS911 family protein inference protein motif:PFAM:PF01527 db_xref GO:0003677 db_xref GO:0004803 db_xref InterPro:IPR002514 4297455 4297742 gene locus_tag Alide2_4121 pseudo 4298219 4297866 gene locus_tag Alide2_4122 4298219 4297866 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86440.1||gnl|jgi|Alide2_4122 note KEGG: dia:Dtpsy_3022 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_3022 4299177 4298305 gene locus_tag Alide2_4123 4299177 4298305 CDS product peptidase M48 Ste24p transl_table 11 protein_id gb|AEB86441.1||gnl|jgi|Alide2_4123 note PFAM: Peptidase M48~KEGG: ajs:Ajs_3742 heat shock protein HtpX inference protein motif:PFAM:PF01435 db_xref GO:0004222 db_xref InterPro:IPR001915 4300095 4299304 gene locus_tag Alide2_4124 4300095 4299304 CDS product putative transmembrane protein transl_table 11 protein_id gb|AEB86442.1||gnl|jgi|Alide2_4124 note KEGG: ajs:Ajs_3743 putative transmembrane protein inference similar to AA sequence:KEGG:Ajs_3743 4301126 4300077 gene locus_tag Alide2_4125 4301126 4300077 CDS product Dihydroorotase EC_number 3.5.2.3 transl_table 11 protein_id gb|AEB86443.1||gnl|jgi|Alide2_4125 note PFAM: Amidohydrolase 1~TIGRFAM: Dihydroorotase homodimeric type~HAMAP: Dihydroorotase homodimeric type~KEGG: dia:Dtpsy_3026 dihydroorotase inference protein motif:HAMAP:MF_00219 db_xref InterPro:IPR004721 db_xref InterPro:IPR006680 4301749 4301248 gene locus_tag Alide2_4126 pseudo 4301889 4302272 gene locus_tag Alide2_4127 4301889 4302272 CDS product protein of unknown function DUF488 transl_table 11 protein_id gb|AEB86444.1||gnl|jgi|Alide2_4127 note PFAM: Protein of unknown function DUF488~KEGG: rfr:Rfer_4130 hypothetical protein inference protein motif:PFAM:PF04343 db_xref InterPro:IPR007438 4302282 4302740 gene locus_tag Alide2_4128 4302282 4302740 CDS product alkylhydroperoxidase like protein, AhpD family transl_table 11 protein_id gb|AEB86445.1||gnl|jgi|Alide2_4128 note KEGG: ote:Oter_3729 alkylhydroperoxidase~TIGRFAM: Alkylhydroperoxidase AhpD core~PFAM: Carboxymuconolactone decarboxylase inference protein motif:TFAM:TIGR00778 db_xref InterPro:IPR003779 db_xref InterPro:IPR004675 4308595 4302761 gene locus_tag Alide2_4129 4308595 4302761 CDS product excinuclease ABC, A subunit transl_table 11 protein_id gb|AEB86446.1||gnl|jgi|Alide2_4129 note TIGRFAM: Excinuclease ABC, A subunit~PFAM: ABC transporter-like~KEGG: ajs:Ajs_3747 UvrA family protein~SMART: ATPase, AAA+ type, core inference protein motif:TFAM:TIGR00630 db_xref GO:0009381 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 db_xref InterPro:IPR004602 4308729 4309841 gene locus_tag Alide2_4130 4308729 4309841 CDS product Extracellular ligand-binding receptor transl_table 11 protein_id gb|AEB86447.1||gnl|jgi|Alide2_4130 note PFAM: Extracellular ligand-binding receptor~KEGG: dia:Dtpsy_3029 extracellular ligand-binding receptor inference protein motif:PFAM:PF01094 db_xref InterPro:IPR001828 4310077 4309910 gene locus_tag Alide2_4131 4310077 4309910 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86448.1||gnl|jgi|Alide2_4131 note KEGG: ajs:Ajs_3750 hypothetical protein inference similar to AA sequence:KEGG:Ajs_3750 4311242 4310223 gene locus_tag Alide2_4132 4311242 4310223 CDS product porin transl_table 11 protein_id gb|AEB86449.1||gnl|jgi|Alide2_4132 note KEGG: ajs:Ajs_3751 porin inference similar to AA sequence:KEGG:Ajs_3751 4313139 4311445 gene locus_tag Alide2_4133 4313139 4311445 CDS product General substrate transporter transl_table 11 protein_id gb|AEB86450.1||gnl|jgi|Alide2_4133 note PFAM: General substrate transporter~KEGG: ajs:Ajs_3752 major facilitator superfamily transporter inference protein motif:PFAM:PF00083 db_xref GO:0005215 db_xref InterPro:IPR005828 4313456 4313764 gene locus_tag Alide2_4134 4313456 4313764 CDS product protein of unknown function DUF485 transl_table 11 protein_id gb|AEB86451.1||gnl|jgi|Alide2_4134 note PFAM: Protein of unknown function DUF485~KEGG: dac:Daci_5956 hypothetical protein inference protein motif:PFAM:PF04341 db_xref InterPro:IPR007436 4313761 4315497 gene locus_tag Alide2_4135 4313761 4315497 CDS product SSS sodium solute transporter superfamily transl_table 11 protein_id gb|AEB86452.1||gnl|jgi|Alide2_4135 note KEGG: rpf:Rpic12D_0449 SSS sodium solute transporter superfamily~TIGRFAM: Sodium/solute symporter, subgroup~PFAM: Sodium/solute symporter inference protein motif:TFAM:TIGR00813 db_xref InterPro:IPR001734 db_xref InterPro:IPR019900 4316286 4315621 gene locus_tag Alide2_4136 4316286 4315621 CDS product Exonuclease RNase T and DNA polymerase III transl_table 11 protein_id gb|AEB86453.1||gnl|jgi|Alide2_4136 note KEGG: pna:Pnap_0481 DNA polymerase III subunit epsilon~PFAM: Exonuclease, RNase T/DNA polymerase III~SMART: Exonuclease inference protein motif:PFAM:PF00929 db_xref InterPro:IPR006055 db_xref InterPro:IPR013520 4318097 4316283 gene locus_tag Alide2_4137 4318097 4316283 CDS product cyclic nucleotide-binding protein transl_table 11 protein_id gb|AEB86454.1||gnl|jgi|Alide2_4137 note KEGG: dac:Daci_5960 CBS domain-containing protein~PFAM: Domain of unknown function DUF294, nucleotidyltransferase putative; Cystathionine beta-synthase, core; Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding~SMART: Cystathionine beta-synthase, core; Cyclic nucleotide-binding domain inference protein motif:PFAM:PF03445 db_xref InterPro:IPR000595 db_xref InterPro:IPR000644 db_xref InterPro:IPR005105 db_xref InterPro:IPR018821 4318761 4318120 gene locus_tag Alide2_4138 4318761 4318120 CDS product DSBA oxidoreductase transl_table 11 protein_id gb|AEB86455.1||gnl|jgi|Alide2_4138 note PFAM: DSBA-like thioredoxin domain~KEGG: dac:Daci_5961 DsbA oxidoreductase inference protein motif:PFAM:PF01323 db_xref GO:0015035 db_xref InterPro:IPR001853 4319018 4318758 gene locus_tag Alide2_4139 4319018 4318758 CDS product protein of unknown function DUF1289 transl_table 11 protein_id gb|AEB86456.1||gnl|jgi|Alide2_4139 note KEGG: dia:Dtpsy_3035 protein of unknown function DUF1289~manually curated~PFAM: Protein of unknown function DUF1289 inference protein motif:PFAM:PF06945 db_xref InterPro:IPR010710 4319509 4319015 gene locus_tag Alide2_4140 4319509 4319015 CDS product YbaK/prolyl-tRNA synthetase associated region transl_table 11 protein_id gb|AEB86457.1||gnl|jgi|Alide2_4140 note PFAM: YbaK/aminoacyl-tRNA synthetase-associated domain~KEGG: aav:Aave_4348 YbaK/prolyl-tRNA synthetase associated region inference protein motif:PFAM:PF04073 db_xref InterPro:IPR007214 4320429 4319515 gene locus_tag Alide2_4141 4320429 4319515 CDS product Hydroxymethylglutaryl-CoA lyase EC_number 4.1.3.4 transl_table 11 protein_id gb|AEB86458.1||gnl|jgi|Alide2_4141 note KEGG: ajs:Ajs_3757 hydroxymethylglutaryl-CoA lyase~PFAM: Pyruvate carboxyltransferase inference protein motif:PRIAM:4.1.3.4 db_xref InterPro:IPR000891 4321635 4320715 gene locus_tag Alide2_4142 4321635 4320715 CDS product Hydroxypyruvate reductase EC_number 1.1.1.81 transl_table 11 protein_id gb|AEB86459.1||gnl|jgi|Alide2_4142 note KEGG: dia:Dtpsy_3039 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding~PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding inference protein motif:PRIAM:1.1.1.81 db_xref InterPro:IPR006140 4323694 4321673 gene locus_tag Alide2_4143 4323694 4321673 CDS product Methylcrotonoyl-CoA carboxylase EC_number 6.4.1.4 transl_table 11 protein_id gb|AEB86460.1||gnl|jgi|Alide2_4143 note PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Carbamoyl-phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; Biotin/lipoyl attachment~KEGG: ajs:Ajs_3759 3-methylcrotonoyl-CoA carboxylase, alpha subunit~SMART: Biotin carboxylase, C-terminal inference protein motif:PRIAM:6.4.1.4 db_xref InterPro:IPR000089 db_xref InterPro:IPR005479 db_xref InterPro:IPR005481 db_xref InterPro:IPR005482 4324414 4323695 gene locus_tag Alide2_4144 4324414 4323695 CDS product putative transmembrane protein transl_table 11 protein_id gb|AEB86461.1||gnl|jgi|Alide2_4144 note KEGG: dia:Dtpsy_3041 putative transmembrane protein inference similar to AA sequence:KEGG:Dtpsy_3041 4325215 4324436 gene locus_tag Alide2_4145 4325215 4324436 CDS product Enoyl-CoA hydratase/isomerase transl_table 11 protein_id gb|AEB86462.1||gnl|jgi|Alide2_4145 note PFAM: Crotonase, core~KEGG: ajs:Ajs_3761 enoyl-CoA hydratase inference protein motif:PFAM:PF00378 db_xref GO:0003824 db_xref InterPro:IPR001753 4326830 4325226 gene locus_tag Alide2_4146 4326830 4325226 CDS product Methylcrotonoyl-CoA carboxylase EC_number 6.4.1.4 transl_table 11 protein_id gb|AEB86463.1||gnl|jgi|Alide2_4146 note KEGG: dia:Dtpsy_3044 propionyl-CoA carboxylase~PFAM: Carboxyl transferase inference protein motif:PRIAM:6.4.1.4 db_xref InterPro:IPR000022 4328548 4326827 gene locus_tag Alide2_4147 4328548 4326827 CDS product Long-chain-fatty-acid--CoA ligase EC_number 6.2.1.3 transl_table 11 protein_id gb|AEB86464.1||gnl|jgi|Alide2_4147 note KEGG: ajs:Ajs_3764 AMP-binding domain protein~PFAM: AMP-dependent synthetase/ligase inference protein motif:PRIAM:6.2.1.3 db_xref InterPro:IPR000873 4328694 4329752 gene locus_tag Alide2_4148 4328694 4329752 CDS product transcriptional regulator, AraC family transl_table 11 protein_id gb|AEB86465.1||gnl|jgi|Alide2_4148 note KEGG: dia:Dtpsy_3046 transcriptional regulator, AraC family~PFAM: HTH transcriptional regulator, AraC~SMART: Helix-turn-helix, AraC type, DNA binding domain inference protein motif:PFAM:PF00165 db_xref GO:0003700 db_xref GO:0043565 db_xref InterPro:IPR000005 db_xref InterPro:IPR018060 4329812 4330477 gene locus_tag Alide2_4149 4329812 4330477 CDS product Glutathione S-transferase domain protein transl_table 11 protein_id gb|AEB86466.1||gnl|jgi|Alide2_4149 note PFAM: Glutathione S-transferase, N-terminal~KEGG: ajs:Ajs_3767 glutathione S-transferase domain-containing protein inference protein motif:PFAM:PF02798 db_xref InterPro:IPR004045 4330565 4332178 gene locus_tag Alide2_4150 4330565 4332178 CDS product Choline dehydrogenase EC_number 1.1.99.1 transl_table 11 protein_id gb|AEB86467.1||gnl|jgi|Alide2_4150 note KEGG: xtr:100491709 choline dehydrogenase-like~PFAM: Glucose-methanol-choline oxidoreductase, N-terminal; Glucose-methanol-choline oxidoreductase, C-terminal inference protein motif:PRIAM:1.1.99.1 db_xref InterPro:IPR000172 db_xref InterPro:IPR007867 4332324 4333523 gene locus_tag Alide2_4151 4332324 4333523 CDS product Extracellular ligand-binding receptor transl_table 11 protein_id gb|AEB86468.1||gnl|jgi|Alide2_4151 note PFAM: Extracellular ligand-binding receptor~KEGG: vei:Veis_0291 extracellular ligand-binding receptor inference protein motif:PFAM:PF01094 db_xref InterPro:IPR001828 4333652 4334572 gene locus_tag Alide2_4152 4333652 4334572 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB86469.1||gnl|jgi|Alide2_4152 note PFAM: ABC transporter permease~KEGG: axy:AXYL_06412 inner-membrane translocator 70 inference protein motif:PFAM:PF02653 db_xref GO:0005215 db_xref InterPro:IPR001851 4334569 4336383 gene locus_tag Alide2_4153 4334569 4336383 CDS product Monosaccharide-transporting ATPase EC_number 3.6.3.17 transl_table 11 protein_id gb|AEB86470.1||gnl|jgi|Alide2_4153 note PFAM: ABC transporter-like; ABC transporter permease~KEGG: axy:AXYL_06411 inner-membrane translocator 69~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.17 db_xref InterPro:IPR001851 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 4336373 4337095 gene locus_tag Alide2_4154 4336373 4337095 CDS product Fe(3+)-transporting ATPase EC_number 3.6.3.30 transl_table 11 protein_id gb|AEB86471.1||gnl|jgi|Alide2_4154 note PFAM: ABC transporter-like~KEGG: axy:AXYL_06410 ABC transporter family protein 103~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.30 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 4337263 4338873 gene locus_tag Alide2_4155 4337263 4338873 CDS product Choline dehydrogenase EC_number 1.1.99.1 transl_table 11 protein_id gb|AEB86472.1||gnl|jgi|Alide2_4155 note KEGG: vei:Veis_0287 glucose-methanol-choline oxidoreductase~PFAM: Glucose-methanol-choline oxidoreductase, N-terminal; Glucose-methanol-choline oxidoreductase, C-terminal inference protein motif:PRIAM:1.1.99.1 db_xref InterPro:IPR000172 db_xref InterPro:IPR007867 4338884 4340542 gene locus_tag Alide2_4156 4338884 4340542 CDS product Long-chain-fatty-acid--CoA ligase EC_number 6.2.1.3 transl_table 11 protein_id gb|AEB86473.1||gnl|jgi|Alide2_4156 note KEGG: ajs:Ajs_3769 AMP-dependent synthetase and ligase~PFAM: AMP-dependent synthetase/ligase inference protein motif:PRIAM:6.2.1.3 db_xref InterPro:IPR000873 4341960 4340572 gene locus_tag Alide2_4157 4341960 4340572 CDS product transcriptional regulator, GntR family with aminotransferase domain transl_table 11 protein_id gb|AEB86474.1||gnl|jgi|Alide2_4157 note KEGG: ctt:CtCNB1_3118 transcriptional regulator, GntR family~PFAM: Aminotransferase, class I/classII; HTH transcriptional regulator, GntR~SMART: HTH transcriptional regulator, GntR inference protein motif:PFAM:PF00155 db_xref GO:0003700 db_xref GO:0030170 db_xref InterPro:IPR000524 db_xref InterPro:IPR004839 4342025 4343317 gene locus_tag Alide2_4158 4342025 4343317 CDS product hydroxymethylglutaryl-CoA reductase, degradative EC_number 1.1.1.88 transl_table 11 protein_id gb|AEB86475.1||gnl|jgi|Alide2_4158 note TIGRFAM: Hydroxymethylglutaryl-CoA reductase, bacterial type~KEGG: xtr:100492358 3-hydroxy-3-methylglutaryl-coenzyme A reductase-like~PFAM: Hydroxymethylglutaryl-CoA reductase, class I/II inference protein motif:TFAM:TIGR00532 db_xref GO:0003700 db_xref GO:0050662 db_xref InterPro:IPR002202 db_xref InterPro:IPR004553 4344039 4343377 gene locus_tag Alide2_4159 4344039 4343377 CDS product HAD-superfamily hydrolase, subfamily IA, variant 3 transl_table 11 protein_id gb|AEB86476.1||gnl|jgi|Alide2_4159 note KEGG: dia:Dtpsy_3047 HAD-superfamily hydrolase, subfamily IA, variant 3~TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3~PFAM: Haloacid dehalogenase-like hydrolase inference protein motif:TFAM:TIGR01509 db_xref GO:0016787 db_xref InterPro:IPR005834 db_xref InterPro:IPR006402 4346075 4344036 gene locus_tag Alide2_4160 4346075 4344036 CDS product diguanylate cyclase with PAS/PAC sensor transl_table 11 protein_id gb|AEB86477.1||gnl|jgi|Alide2_4160 note TIGRFAM: Diguanylate cyclase, predicted; PAS~PFAM: Diguanylate cyclase, predicted; PAS fold-3~KEGG: dia:Dtpsy_3048 diguanylate cyclase with PAS/PAC sensor~SMART: Diguanylate cyclase, predicted inference protein motif:TFAM:TIGR00254 db_xref GO:0004871 db_xref InterPro:IPR000014 db_xref InterPro:IPR000160 db_xref InterPro:IPR013655 4346181 4347692 gene locus_tag Alide2_4161 4346181 4347692 CDS product ABC-type transporter, periplasmic subunit transl_table 11 protein_id gb|AEB86478.1||gnl|jgi|Alide2_4161 note PFAM: Bacterial extracellular solute-binding protein, family 5~KEGG: dia:Dtpsy_3049 extracellular solute-binding protein family 5 inference protein motif:PFAM:PF00496 db_xref GO:0005215 db_xref InterPro:IPR000914 4347940 4348731 gene locus_tag Alide2_4162 4347940 4348731 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86479.1||gnl|jgi|Alide2_4162 note KEGG: rfr:Rfer_2484 hypothetical protein inference similar to AA sequence:KEGG:Rfer_2484 4351694 4348734 gene locus_tag Alide2_4163 4351694 4348734 CDS product diguanylate cyclase/phosphodiesterase transl_table 11 protein_id gb|AEB86480.1||gnl|jgi|Alide2_4163 note TIGRFAM: Diguanylate cyclase, predicted~PFAM: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted~KEGG: rfr:Rfer_2485 diguanylate cyclase/phosphodiesterase~SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted inference protein motif:TFAM:TIGR00254 db_xref InterPro:IPR000160 db_xref InterPro:IPR001633 4352222 4351827 gene locus_tag Alide2_4164 4352222 4351827 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86481.1||gnl|jgi|Alide2_4164 note KEGG: dac:Daci_5982 hypothetical protein inference similar to AA sequence:KEGG:Daci_5982 4352920 4352219 gene locus_tag Alide2_4165 4352920 4352219 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86482.1||gnl|jgi|Alide2_4165 note KEGG: pna:Pnap_0218 hypothetical protein inference similar to AA sequence:KEGG:Pnap_0218 db_xref InterPro:IPR006311 4353014 4353508 gene locus_tag Alide2_4166 4353014 4353508 CDS product protein of unknown function DUF421 transl_table 11 protein_id gb|AEB86483.1||gnl|jgi|Alide2_4166 note PFAM: Protein of unknown function DUF421~KEGG: aav:Aave_4363 hypothetical protein inference protein motif:PFAM:PF04239 db_xref InterPro:IPR007353 4353789 4354604 gene locus_tag Alide2_4167 4353789 4354604 CDS product transcriptional regulator, IclR family transl_table 11 protein_id gb|AEB86484.1||gnl|jgi|Alide2_4167 note PFAM: Transcription regulator IclR, N-terminal; Transcription regulator IclR, C-terminal~KEGG: axy:AXYL_04090 transcriptional regulator family protein 21 inference protein motif:PFAM:PF09339 db_xref GO:0003677 db_xref InterPro:IPR005471 db_xref InterPro:IPR014757 4354601 4355305 gene locus_tag Alide2_4168 4354601 4355305 CDS product Dipeptidase E EC_number 3.4.13.21 transl_table 11 protein_id gb|AEB86485.1||gnl|jgi|Alide2_4168 note KEGG: aav:Aave_4364 peptidase E~PFAM: Peptidase S51 inference protein motif:PRIAM:3.4.13.21 db_xref InterPro:IPR005320 4355336 4356238 gene locus_tag Alide2_4169 4355336 4356238 CDS product protein of unknown function DUF1177 transl_table 11 protein_id gb|AEB86486.1||gnl|jgi|Alide2_4169 note PFAM: Protein of unknown function DUF1177~KEGG: axy:AXYL_04088 hypothetical protein inference protein motif:PFAM:PF06675 db_xref InterPro:IPR009561 4356235 4356912 gene locus_tag Alide2_4170 4356235 4356912 CDS product AroM family protein transl_table 11 protein_id gb|AEB86487.1||gnl|jgi|Alide2_4170 note PFAM: Uncharacterised protein family AroM~KEGG: axy:AXYL_04087 AroM family protein inference protein motif:PFAM:PF07302 db_xref InterPro:IPR010843 4356947 4357927 gene locus_tag Alide2_4171 4356947 4357927 CDS product extra-cytoplasmic solute receptor family protein 94 transl_table 11 protein_id gb|AEB86488.1||gnl|jgi|Alide2_4171 note KEGG: axy:AXYL_04086 extra-cytoplasmic solute receptor family protein 94 inference similar to AA sequence:KEGG:AXYL_04086 db_xref InterPro:IPR005064 4358730 4357937 gene locus_tag Alide2_4172 pseudo 4358748 4359164 gene locus_tag Alide2_4173 pseudo 4360435 4359305 gene locus_tag Alide2_4174 4360435 4359305 CDS product Butyryl-CoA dehydrogenase EC_number 1.3.8.1 transl_table 11 protein_id gb|AEB86489.1||gnl|jgi|Alide2_4174 note KEGG: ajs:Ajs_3774 acyl-CoA dehydrogenase domain-containing protein~PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal inference protein motif:PRIAM:1.3.99.2 db_xref InterPro:IPR006090 db_xref InterPro:IPR006091 db_xref InterPro:IPR006092 4361127 4360459 gene locus_tag Alide2_4175 4361127 4360459 CDS product short-chain dehydrogenase/reductase SDR transl_table 11 protein_id gb|AEB86490.1||gnl|jgi|Alide2_4175 note PFAM: Short-chain dehydrogenase/reductase SDR~KEGG: dia:Dtpsy_3053 short chain dehydrogenase inference protein motif:PFAM:PF00106 db_xref GO:0016491 db_xref InterPro:IPR002198 4362387 4361197 gene locus_tag Alide2_4176 4362387 4361197 CDS product acetyl-CoA acetyltransferase EC_number 2.3.1.9 transl_table 11 protein_id gb|AEB86491.1||gnl|jgi|Alide2_4176 note TIGRFAM: Thiolase~KEGG: ctt:CtCNB1_0487 acetyl-CoA acetyltransferase~PFAM: Thiolase, N-terminal; Thiolase, C-terminal inference protein motif:TFAM:TIGR01930 db_xref GO:0016491 db_xref InterPro:IPR002155 db_xref InterPro:IPR020616 db_xref InterPro:IPR020617 4364210 4362384 gene locus_tag Alide2_4177 4364210 4362384 CDS product Isocitrate dehydrogenase kinase/phosphatase EC_number 2.7.11.5 transl_table 11 protein_id gb|AEB86492.1||gnl|jgi|Alide2_4177 note HAMAP: Isocitrate dehydrogenase kinasephosphatase~KEGG: ajs:Ajs_3777 bifunctional isocitrate dehydrogenase kinase/phosphatase protein~PFAM: Isocitrate dehydrogenase kinasephosphatase inference protein motif:HAMAP:MF_00747 db_xref InterPro:IPR010452 4364928 4364263 gene locus_tag Alide2_4178 4364928 4364263 CDS product Carbonate dehydratase EC_number 4.2.1.1 transl_table 11 protein_id gb|AEB86493.1||gnl|jgi|Alide2_4178 note PFAM: Carbonic anhydrase~KEGG: dia:Dtpsy_3056 carbonate dehydratase~SMART: Carbonic anhydrase inference protein motif:PRIAM:4.2.1.1 db_xref InterPro:IPR001765 4366172 4364982 gene locus_tag Alide2_4179 4366172 4364982 CDS product Isovaleryl-CoA dehydrogenase EC_number 1.3.99.10 transl_table 11 protein_id gb|AEB86494.1||gnl|jgi|Alide2_4179 note KEGG: ajs:Ajs_3779 isovaleryl-CoA dehydrogenase~PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal inference protein motif:PRIAM:1.3.99.10 db_xref InterPro:IPR006090 db_xref InterPro:IPR006091 db_xref InterPro:IPR006092 4366719 4366312 gene locus_tag Alide2_4180 4366719 4366312 CDS product transcriptional regulator, MerR family transl_table 11 protein_id gb|AEB86495.1||gnl|jgi|Alide2_4180 note KEGG: dia:Dtpsy_3058 transcriptional regulator, MerR family~PFAM: Transcription regulator MerR, DNA binding; HTH transcriptional regulator, MerR~SMART: HTH transcriptional regulator, MerR inference protein motif:PFAM:PF09278 db_xref GO:0003700 db_xref InterPro:IPR000551 db_xref InterPro:IPR015358 4366934 4366822 gene locus_tag Alide2_R0057 4366934 4366822 rRNA product 5S ribosomal RNA note 5S ribosomal RNA as predicted by Rfam (RF00001), score 84.63 4369928 4367051 gene locus_tag Alide2_R0058 4369928 4367051 rRNA product 23S ribosomal RNA note RNAmmer 1.2, Lagesen et al, Nucleic Acids Res. Apr 22, 2007 4370365 4370290 gene locus_tag Alide2_R0059 note tRNA-Ala4 4370365 4370290 tRNA product tRNA-Ala 4370472 4370396 gene locus_tag Alide2_R0060 note tRNA-Ile3 4370472 4370396 tRNA product tRNA-Ile 4372093 4370577 gene locus_tag Alide2_R0061 4372093 4370577 rRNA product 16S ribosomal RNA note RNAmmer 1.2, Lagesen et al, Nucleic Acids Res. Apr 22, 2007 4372630 4374516 gene locus_tag Alide2_4181 4372630 4374516 CDS product Monosaccharide-transporting ATPase EC_number 3.6.3.17 transl_table 11 protein_id gb|AEB86496.1||gnl|jgi|Alide2_4181 note PFAM: ABC transporter-like~KEGG: ajs:Ajs_3785 ABC transporter related~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.17 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 4375629 4374520 gene locus_tag Alide2_4182 4375629 4374520 CDS product response regulator receiver modulated CheB methylesterase EC_number 3.1.1.61 transl_table 11 protein_id gb|AEB86497.1||gnl|jgi|Alide2_4182 note PFAM: Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase; Signal transduction response regulator, receiver domain~KEGG: dia:Dtpsy_3060 response regulator receiver modulated CheB methylesterase~SMART: Signal transduction response regulator, receiver domain inference protein motif:PRIAM:3.1.1.61 db_xref InterPro:IPR000673 db_xref InterPro:IPR001789 4376413 4375676 gene locus_tag Alide2_4183 4376413 4375676 CDS product CheD EC_number 3.5.1.44 transl_table 11 protein_id gb|AEB86498.1||gnl|jgi|Alide2_4183 note KEGG: ajs:Ajs_3787 chemoreceptor glutamine deamidase CheD~PFAM: Chemoreceptor glutamine deamidase CheD inference protein motif:PRIAM:3.5.1.44 db_xref InterPro:IPR005659 4377344 4376430 gene locus_tag Alide2_4184 4377344 4376430 CDS product MCP methyltransferase, CheR-type EC_number 2.1.1.80 transl_table 11 protein_id gb|AEB86499.1||gnl|jgi|Alide2_4184 note PFAM: MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal; MCP methyltransferase, CheR-type, all-alpha domain, N-terminal~KEGG: dia:Dtpsy_3062 MCP methyltransferase, CheR-type~SMART: MCP methyltransferase, CheR-type inference protein motif:PRIAM:2.1.1.80 db_xref InterPro:IPR000780 db_xref InterPro:IPR022641 db_xref InterPro:IPR022642 4377826 4377344 gene locus_tag Alide2_4185 4377826 4377344 CDS product CheW protein transl_table 11 protein_id gb|AEB86500.1||gnl|jgi|Alide2_4185 note KEGG: dia:Dtpsy_3063 CheW protein~PFAM: CheW-like protein~SMART: CheW-like protein inference protein motif:PFAM:PF01584 db_xref GO:0004871 db_xref InterPro:IPR002545 4379960 4377861 gene locus_tag Alide2_4186 4379960 4377861 CDS product CheA signal transduction histidine kinase transl_table 11 protein_id gb|AEB86501.1||gnl|jgi|Alide2_4186 note KEGG: ajs:Ajs_3790 CheA signal transduction histidine kinases~PFAM: CheW-like protein; ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup, homodimeric; Signal transduction histidine kinase, phosphotransfer (Hpt) domain~SMART: CheW-like protein; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; ATPase-like, ATP-binding domain inference protein motif:PFAM:PF01584 db_xref GO:0000155 db_xref GO:0004673 db_xref GO:0004871 db_xref GO:0005524 db_xref InterPro:IPR002545 db_xref InterPro:IPR003594 db_xref InterPro:IPR004105 db_xref InterPro:IPR008207 4380379 4380017 gene locus_tag Alide2_4187 4380379 4380017 CDS product response regulator receiver protein transl_table 11 protein_id gb|AEB86502.1||gnl|jgi|Alide2_4187 note KEGG: dia:Dtpsy_3065 response regulator receiver protein~PFAM: Signal transduction response regulator, receiver domain~SMART: Signal transduction response regulator, receiver domain inference protein motif:PFAM:PF00072 db_xref GO:0000156 db_xref InterPro:IPR001789 4380885 4380439 gene locus_tag Alide2_4188 4380885 4380439 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86503.1||gnl|jgi|Alide2_4188 note KEGG: dia:Dtpsy_3066 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_3066 4380959 4382080 gene locus_tag Alide2_4189 4380959 4382080 CDS product response regulator receiver sensor signal transduction histidine kinase transl_table 11 protein_id gb|AEB86504.1||gnl|jgi|Alide2_4189 note KEGG: ajs:Ajs_3793 response regulator receiver sensor signal transduction histidine kinase~PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; Signal transduction response regulator, receiver domain~SMART: Signal transduction response regulator, receiver domain; ATPase-like, ATP-binding domain inference protein motif:PFAM:PF02518 db_xref GO:0000155 db_xref GO:0000156 db_xref GO:0005524 db_xref GO:0046983 db_xref InterPro:IPR001789 db_xref InterPro:IPR003594 db_xref InterPro:IPR011712 4382077 4382706 gene locus_tag Alide2_4190 4382077 4382706 CDS product two component transcriptional regulator, LuxR family transl_table 11 protein_id gb|AEB86505.1||gnl|jgi|Alide2_4190 note KEGG: dia:Dtpsy_3068 two component transcriptional regulator, LuxR family~PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal~SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal inference protein motif:PFAM:PF00072 db_xref GO:0000156 db_xref GO:0003700 db_xref GO:0043565 db_xref InterPro:IPR000792 db_xref InterPro:IPR001789 4383555 4382791 gene locus_tag Alide2_4191 4383555 4382791 CDS product flagellar biosynthetic protein FliR transl_table 11 protein_id gb|AEB86506.1||gnl|jgi|Alide2_4191 note KEGG: ajs:Ajs_3795 flagellar biosynthetic protein FliR~TIGRFAM: Flagellar biosynthesis protein FliR~PFAM: Type III secretion system inner membrane R protein inference protein motif:TFAM:TIGR01400 db_xref InterPro:IPR002010 db_xref InterPro:IPR006303 4383821 4383552 gene locus_tag Alide2_4192 4383821 4383552 CDS product flagellar biosynthetic protein FliQ transl_table 11 protein_id gb|AEB86507.1||gnl|jgi|Alide2_4192 note KEGG: ajs:Ajs_3796 flagellar biosynthetic protein FliQ~TIGRFAM: Flagellar biosynthesis protein FliQ~PFAM: Bacterial export protein FliQ, family 3 inference protein motif:TFAM:TIGR01402 db_xref InterPro:IPR002191 db_xref InterPro:IPR006305 4384587 4383832 gene locus_tag Alide2_4193 4384587 4383832 CDS product flagellar biosynthetic protein FliP transl_table 11 protein_id gb|AEB86508.1||gnl|jgi|Alide2_4193 note KEGG: ajs:Ajs_3797 flagellar biosynthesis protein FliP~TIGRFAM: Flagellar transport protein FliP~PFAM: Type III secretion system inner membrane P protein inference protein motif:TFAM:TIGR01103 db_xref InterPro:IPR005837 db_xref InterPro:IPR005838 4384948 4384580 gene locus_tag Alide2_4194 4384948 4384580 CDS product Flagellar biosynthesis protein, FliO transl_table 11 protein_id gb|AEB86509.1||gnl|jgi|Alide2_4194 note PFAM: Flagellar biosynthesis protein, FliO~KEGG: dia:Dtpsy_3072 flagellar biosynthesis protein FliO inference protein motif:PFAM:PF04347 db_xref InterPro:IPR022781 4385387 4384932 gene locus_tag Alide2_4195 4385387 4384932 CDS product flagellar motor switch protein FliN transl_table 11 protein_id gb|AEB86510.1||gnl|jgi|Alide2_4195 note KEGG: dia:Dtpsy_3073 flagellar motor switch protein FliN~TIGRFAM: Flagellar motor switch FliN~PFAM: Surface presentation of antigen (SpoA) inference protein motif:TFAM:TIGR02480 db_xref InterPro:IPR001543 db_xref InterPro:IPR012826 4386381 4385377 gene locus_tag Alide2_4196 4386381 4385377 CDS product flagellar motor switch protein FliM transl_table 11 protein_id gb|AEB86511.1||gnl|jgi|Alide2_4196 note KEGG: dia:Dtpsy_3074 flagellar motor switch protein FliM~TIGRFAM: Flagellar motor switch protein FliM~PFAM: Flagellar motor switch protein FliM; Surface presentation of antigen (SpoA) inference protein motif:TFAM:TIGR01397 db_xref GO:0003774 db_xref InterPro:IPR001543 db_xref InterPro:IPR001689 4386963 4386388 gene locus_tag Alide2_4197 4386963 4386388 CDS product flagellar basal body-associated protein FliL transl_table 11 protein_id gb|AEB86512.1||gnl|jgi|Alide2_4197 note PFAM: Flagellar basal body-associated protein FliL~KEGG: dia:Dtpsy_3075 flagellar basal body-associated protein FliL inference protein motif:PFAM:PF03748 db_xref InterPro:IPR005503 4388496 4387129 gene locus_tag Alide2_4198 4388496 4387129 CDS product Flagellar hook-length control protein-like protein transl_table 11 protein_id gb|AEB86513.1||gnl|jgi|Alide2_4198 note PFAM: Flagellar hook-length control protein-like, C-terminal domain~KEGG: ajs:Ajs_3802 flagellar hook-length control protein inference protein motif:PFAM:PF02120 db_xref InterPro:IPR021136 4388963 4388499 gene locus_tag Alide2_4199 4388963 4388499 CDS product flagellar export protein FliJ transl_table 11 protein_id gb|AEB86514.1||gnl|jgi|Alide2_4199 note KEGG: dia:Dtpsy_3077 flagellar export protein FliJ~TIGRFAM: Flagellar export FliJ~PFAM: Flagellar export FliJ inference protein motif:TFAM:TIGR02473 db_xref GO:0003774 db_xref InterPro:IPR012823 4390418 4389015 gene locus_tag Alide2_4200 4390418 4389015 CDS product flagellar protein export ATPase FliI EC_number 3.6.3.14 transl_table 11 protein_id gb|AEB86515.1||gnl|jgi|Alide2_4200 note SMART: ATPase, AAA+ type, core~TIGRFAM: Flagellar export ATPase, FliI, clade 1; ATPase, type III secretion system, FliI/YscN~KEGG: dia:Dtpsy_3078 ATPase FliI/YscN~PFAM: ATPase, alpha/beta subunit, nucleotide-binding domain inference protein motif:TFAM:TIGR03496 db_xref GO:0005524 db_xref GO:0016887 db_xref InterPro:IPR000194 db_xref InterPro:IPR003593 db_xref InterPro:IPR005714 db_xref InterPro:IPR020005 4391133 4390408 gene locus_tag Alide2_4201 4391133 4390408 CDS product Flagellar assembly protein FliH/Type III secretion system HrpE transl_table 11 protein_id gb|AEB86516.1||gnl|jgi|Alide2_4201 note PFAM: Flagellar assembly protein FliH/Type III secretion system HrpE~KEGG: dia:Dtpsy_3079 flagellar assembly protein FliH inference protein motif:PFAM:PF02108 db_xref InterPro:IPR018035 4392150 4391155 gene locus_tag Alide2_4202 4392150 4391155 CDS product flagellar motor switch protein FliG transl_table 11 protein_id gb|AEB86517.1||gnl|jgi|Alide2_4202 note KEGG: dia:Dtpsy_3080 flagellar motor switch protein FliG~TIGRFAM: Flagellar motor switch protein FliG~PFAM: Flagellar motor switch protein FliG, C-terminal inference protein motif:TFAM:TIGR00207 db_xref GO:0003774 db_xref InterPro:IPR000090 db_xref InterPro:IPR023087 4393875 4392181 gene locus_tag Alide2_4203 4393875 4392181 CDS product flagellar M-ring protein FliF transl_table 11 protein_id gb|AEB86518.1||gnl|jgi|Alide2_4203 note KEGG: dia:Dtpsy_3081 flagellar M-ring protein FliF~TIGRFAM: Flagellar FliF M-ring protein~PFAM: Secretory protein YscJ/FliF; Flagellar M-ring C-terminal inference protein motif:TFAM:TIGR00206 db_xref GO:0003774 db_xref InterPro:IPR000067 db_xref InterPro:IPR006182 db_xref InterPro:IPR013556 4394051 4394362 gene locus_tag Alide2_4204 4394051 4394362 CDS product flagellar hook-basal body complex subunit FliE transl_table 11 protein_id gb|AEB86519.1||gnl|jgi|Alide2_4204 note KEGG: dia:Dtpsy_3082 flagellar hook-basal body complex subunit FliE~TIGRFAM: Flagellar hook-basal body complex protein FliE~PFAM: Flagellar hook-basal body complex protein FliE inference protein motif:TFAM:TIGR00205 db_xref GO:0003774 db_xref GO:0005198 db_xref InterPro:IPR001624 4394877 4394578 gene locus_tag Alide2_4205 4394877 4394578 CDS product flagellar export chaperone transl_table 11 protein_id gb|AEB86520.1||gnl|jgi|Alide2_4205 note PFAM: Flagellar export chaperone, FliT~KEGG: dia:Dtpsy_3083 flagellar protein FliT inference protein motif:PFAM:PF05400 db_xref InterPro:IPR008622 4395321 4394881 gene locus_tag Alide2_4206 4395321 4394881 CDS product flagellar protein FliS transl_table 11 protein_id gb|AEB86521.1||gnl|jgi|Alide2_4206 note KEGG: dia:Dtpsy_3084 flagellar protein FliS~TIGRFAM: Flagellar protein FliS~PFAM: Flagellar protein FliS inference protein motif:TFAM:TIGR00208 db_xref InterPro:IPR003713 4396833 4395388 gene locus_tag Alide2_4207 4396833 4395388 CDS product flagellar hook-associated 2 domain-containing protein transl_table 11 protein_id gb|AEB86522.1||gnl|jgi|Alide2_4207 note PFAM: Flagellar hook-associated 2, C-terminal; Flagellar hook-associated protein 2, N-terminal; Flagellin hook, IN motif~KEGG: aav:Aave_4399 flagellar hook-associated 2 domain-containing protein inference protein motif:PFAM:PF07195 db_xref InterPro:IPR003481 db_xref InterPro:IPR010809 db_xref InterPro:IPR010810 4398526 4397066 gene locus_tag Alide2_4208 4398526 4397066 CDS product flagellin domain protein transl_table 11 protein_id gb|AEB86523.1||gnl|jgi|Alide2_4208 note PFAM: Flagellin, D0/D1 domain; Flagellin hook, IN motif~KEGG: aav:Aave_4400 flagellin domain-containing protein inference protein motif:PFAM:PF00669 db_xref GO:0005198 db_xref InterPro:IPR001029 db_xref InterPro:IPR010810 4398861 4400330 gene locus_tag Alide2_4209 4398861 4400330 CDS product flagellin domain protein transl_table 11 protein_id gb|AEB86524.1||gnl|jgi|Alide2_4209 note PFAM: Flagellin, D0/D1 domain; Flagellin hook, IN motif~KEGG: aav:Aave_4401 flagellin domain-containing protein inference protein motif:PFAM:PF00669 db_xref GO:0005198 db_xref InterPro:IPR001029 db_xref InterPro:IPR010810 4405501 4400492 gene locus_tag Alide2_4210 4405501 4400492 CDS product glycosyl transferase family 2 transl_table 11 protein_id gb|AEB86525.1||gnl|jgi|Alide2_4210 note KEGG: psa:PST_1402 hypothetical protein~manually curated~PFAM: Glycosyl transferase, family 2; Capsule polysaccharide biosynthesis inference protein motif:PFAM:PF00535 db_xref InterPro:IPR001173 db_xref InterPro:IPR007833 4406790 4405501 gene locus_tag Alide2_4211 4406790 4405501 CDS product Dimethylmenaquinone methyltransferase transl_table 11 protein_id gb|AEB86526.1||gnl|jgi|Alide2_4211 note PFAM: Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase; Acylneuraminate cytidylyltransferase~KEGG: syd:Syncc9605_2247 demethylmenaquinone methyltransferase-like inference protein motif:PFAM:PF03737 db_xref InterPro:IPR003329 db_xref InterPro:IPR005493 4407385 4408245 gene locus_tag Alide2_4212 4407385 4408245 CDS product flagellar motor stator protein MotA transl_table 11 protein_id gb|AEB86527.1||gnl|jgi|Alide2_4212 note KEGG: dia:Dtpsy_3088 MotA/TolQ/ExbB proton channel~TIGRFAM: Flagellar motor stator, MotA~PFAM: MotA/TolQ/ExbB proton channel inference protein motif:TFAM:TIGR03818 db_xref InterPro:IPR002898 db_xref InterPro:IPR022522 4408264 4409199 gene locus_tag Alide2_4213 4408264 4409199 CDS product OmpA/MotB domain protein transl_table 11 protein_id gb|AEB86528.1||gnl|jgi|Alide2_4213 note PFAM: Outer membrane protein, OmpA/MotB, C-terminal~KEGG: dia:Dtpsy_3089 OmpA/MotB domain protein inference protein motif:PFAM:PF00691 db_xref InterPro:IPR006665 4409269 4409655 gene locus_tag Alide2_4214 4409269 4409655 CDS product response regulator receiver protein transl_table 11 protein_id gb|AEB86529.1||gnl|jgi|Alide2_4214 note KEGG: dia:Dtpsy_3090 response regulator receiver protein~PFAM: Signal transduction response regulator, receiver domain~SMART: Signal transduction response regulator, receiver domain inference protein motif:PFAM:PF00072 db_xref GO:0000156 db_xref InterPro:IPR001789 4409658 4410290 gene locus_tag Alide2_4215 4409658 4410290 CDS product chemotaxis phosphatase, CheZ transl_table 11 protein_id gb|AEB86530.1||gnl|jgi|Alide2_4215 note PFAM: Chemotaxis phosphatase, CheZ~KEGG: ajs:Ajs_3818 chemotaxis phosphatase, CheZ inference protein motif:PFAM:PF04344 db_xref GO:0003824 db_xref InterPro:IPR007439 4410387 4411547 gene locus_tag Alide2_4216 4410387 4411547 CDS product type III secretion exporter transl_table 11 protein_id gb|AEB86531.1||gnl|jgi|Alide2_4216 note PFAM: Type III secretion exporter~KEGG: dia:Dtpsy_3092 type III secretion exporter inference protein motif:PFAM:PF01312 db_xref InterPro:IPR006135 4411544 4413634 gene locus_tag Alide2_4217 4411544 4413634 CDS product flagellar biosynthesis protein FlhA transl_table 11 protein_id gb|AEB86532.1||gnl|jgi|Alide2_4217 note KEGG: dia:Dtpsy_3093 flagellar biosynthesis protein FlhA~TIGRFAM: Flagellar biosynthesis protein FlhA~PFAM: Type III secretion system FHIPEP inference protein motif:TFAM:TIGR01398 db_xref InterPro:IPR001712 db_xref InterPro:IPR006301 4413631 4415193 gene locus_tag Alide2_4218 4413631 4415193 CDS product flagellar biosynthetic protein FlhF transl_table 11 protein_id gb|AEB86533.1||gnl|jgi|Alide2_4218 note TIGRFAM: Signal-recognition particle (SRP)-type GTPase~PFAM: Signal recognition particle, SRP54 subunit, GTPase~KEGG: ajs:Ajs_3821 GTP-binding signal recognition particle~SMART: ATPase, AAA+ type, core inference protein motif:TFAM:TIGR03499 db_xref GO:0005525 db_xref InterPro:IPR000897 db_xref InterPro:IPR003593 db_xref InterPro:IPR020006 4415183 4415986 gene locus_tag Alide2_4219 4415183 4415986 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86534.1||gnl|jgi|Alide2_4219 note KEGG: ajs:Ajs_3822 hypothetical protein inference similar to AA sequence:KEGG:Ajs_3822 4415992 4416708 gene locus_tag Alide2_4220 4415992 4416708 CDS product RNA polymerase, sigma 28 subunit, FliA/WhiG transl_table 11 protein_id gb|AEB86535.1||gnl|jgi|Alide2_4220 note KEGG: dia:Dtpsy_3096 RNA polymerase, sigma 28 subunit, FliA/WhiG~TIGRFAM: RNA polymerase sigma factor, FliA/WhiG; RNA polymerase sigma-70~PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 3; RNA polymerase sigma-70 region 4 inference protein motif:TFAM:TIGR02479 db_xref GO:0003677 db_xref GO:0003700 db_xref GO:0003899 db_xref GO:0016987 db_xref InterPro:IPR007624 db_xref InterPro:IPR007627 db_xref InterPro:IPR007630 db_xref InterPro:IPR012845 db_xref InterPro:IPR014284 4417176 4416838 gene locus_tag Alide2_4221 4417176 4416838 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86536.1||gnl|jgi|Alide2_4221 note KEGG: ajs:Ajs_3824 hypothetical protein inference similar to AA sequence:KEGG:Ajs_3824 4417535 4417212 gene locus_tag Alide2_4222 4417535 4417212 CDS product flagellar biosynthesis anti-sigma factor protein FlgM transl_table 11 protein_id gb|AEB86537.1||gnl|jgi|Alide2_4222 note KEGG: dia:Dtpsy_3098 anti-sigma-28 factor, FlgM~TIGRFAM: Anti-sigma-28 factor, FlgM~PFAM: Anti-sigma-28 factor, FlgM inference protein motif:TFAM:TIGR03824 db_xref GO:0016564 db_xref InterPro:IPR007412 4418375 4417629 gene locus_tag Alide2_4223 4418375 4417629 CDS product flagella basal body P-ring formation protein FlgA transl_table 11 protein_id gb|AEB86538.1||gnl|jgi|Alide2_4223 note TIGRFAM: Flagella basal body P-ring formation protein FlgA~PFAM: SAF domain~KEGG: dia:Dtpsy_3099 flagella basal body P-ring formation protein FlgA~SMART: SAF domain inference protein motif:TFAM:TIGR03170 db_xref InterPro:IPR013974 db_xref InterPro:IPR017585 4418558 4418974 gene locus_tag Alide2_4224 4418558 4418974 CDS product flagellar basal-body rod protein FlgB transl_table 11 protein_id gb|AEB86539.1||gnl|jgi|Alide2_4224 note KEGG: ajs:Ajs_3827 flagellar basal-body rod protein FlgB~TIGRFAM: Flagellar basal-body rod protein FlgB~PFAM: Flagellar basal body rod protein, N-terminal inference protein motif:TFAM:TIGR01396 db_xref InterPro:IPR001444 db_xref InterPro:IPR006300 4418986 4419390 gene locus_tag Alide2_4225 4418986 4419390 CDS product flagellar basal-body rod protein FlgC transl_table 11 protein_id gb|AEB86540.1||gnl|jgi|Alide2_4225 note KEGG: dia:Dtpsy_3101 flagellar basal-body rod protein FlgC~TIGRFAM: Flagellar basal-body rod protein FlgC~PFAM: Domain of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal inference protein motif:TFAM:TIGR01395 db_xref InterPro:IPR001444 db_xref InterPro:IPR006299 db_xref InterPro:IPR010930 4419406 4420068 gene locus_tag Alide2_4226 4419406 4420068 CDS product flagellar hook capping protein transl_table 11 protein_id gb|AEB86541.1||gnl|jgi|Alide2_4226 note PFAM: Flagellar hook capping protein~KEGG: dia:Dtpsy_3102 flagellar hook capping protein inference protein motif:PFAM:PF03963 db_xref InterPro:IPR005648 4420105 4421385 gene locus_tag Alide2_4227 4420105 4421385 CDS product flagellar hook-basal body protein transl_table 11 protein_id gb|AEB86542.1||gnl|jgi|Alide2_4227 note KEGG: aav:Aave_4423 hypothetical protein~TIGRFAM: Fagellar hook-basal body protein, FlgE/F/G~PFAM: Flagellar basal body FlaE; Domain of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal inference protein motif:TFAM:TIGR03506 db_xref InterPro:IPR001444 db_xref InterPro:IPR010930 db_xref InterPro:IPR011491 db_xref InterPro:IPR020013 4421411 4422151 gene locus_tag Alide2_4228 4421411 4422151 CDS product flagellar basal-body rod protein FlgF transl_table 11 protein_id gb|AEB86543.1||gnl|jgi|Alide2_4228 note KEGG: dia:Dtpsy_3104 flagellar basal-body rod protein FlgF~TIGRFAM: Flagellar basal-body rod FlgF; Fagellar hook-basal body protein, FlgE/F/G~PFAM: Flagellar basal body rod protein, N-terminal inference protein motif:TFAM:TIGR02490 db_xref InterPro:IPR001444 db_xref InterPro:IPR012836 db_xref InterPro:IPR020013 4422176 4422958 gene locus_tag Alide2_4229 4422176 4422958 CDS product flagellar basal-body rod protein FlgG transl_table 11 protein_id gb|AEB86544.1||gnl|jgi|Alide2_4229 note KEGG: dia:Dtpsy_3105 flagellar basal-body rod protein FlgG~TIGRFAM: Flagellar basal-body rod FlgG; Fagellar hook-basal body protein, FlgE/F/G~PFAM: Domain of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal inference protein motif:TFAM:TIGR02488 db_xref InterPro:IPR001444 db_xref InterPro:IPR010930 db_xref InterPro:IPR012834 db_xref InterPro:IPR020013 4422973 4423656 gene locus_tag Alide2_4230 4422973 4423656 CDS product flagellar L-ring protein transl_table 11 protein_id gb|AEB86545.1||gnl|jgi|Alide2_4230 note PFAM: Flagellar L-ring protein~KEGG: aav:Aave_4426 flagellar L-ring protein inference protein motif:PFAM:PF02107 db_xref GO:0003774 db_xref InterPro:IPR000527 4423851 4424996 gene locus_tag Alide2_4231 4423851 4424996 CDS product flagellar P-ring protein transl_table 11 protein_id gb|AEB86546.1||gnl|jgi|Alide2_4231 note PFAM: Flagellar P-ring protein~KEGG: aav:Aave_4428 flagellar basal body P-ring protein inference protein motif:PFAM:PF02119 db_xref GO:0005198 db_xref InterPro:IPR001782 4424996 4425934 gene locus_tag Alide2_4232 4424996 4425934 CDS product flagellar rod assembly protein/muramidase FlgJ transl_table 11 protein_id gb|AEB86547.1||gnl|jgi|Alide2_4232 note KEGG: ajs:Ajs_3836 flagellar rod assembly protein/muramidase FlgJ~TIGRFAM: Flagellar protein FlgJ type-2~PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; Flagellar protein FlgJ, N-terminal inference protein motif:TFAM:TIGR02541 db_xref GO:0005198 db_xref InterPro:IPR002901 db_xref InterPro:IPR013377 db_xref InterPro:IPR019301 4425946 4427928 gene locus_tag Alide2_4233 4425946 4427928 CDS product flagellar hook-associated protein FlgK transl_table 11 protein_id gb|AEB86548.1||gnl|jgi|Alide2_4233 note KEGG: dia:Dtpsy_3110 flagellar hook-associated protein FlgK~TIGRFAM: Flagellar hook-associated protein, FlgK~PFAM: Domain of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal inference protein motif:TFAM:TIGR02492 db_xref GO:0005198 db_xref InterPro:IPR001444 db_xref InterPro:IPR002371 db_xref InterPro:IPR010930 4427930 4429180 gene locus_tag Alide2_4234 4427930 4429180 CDS product flagellar hook-associated protein 3 transl_table 11 protein_id gb|AEB86549.1||gnl|jgi|Alide2_4234 note KEGG: aav:Aave_4431 flagellar hook-associated protein 3~TIGRFAM: Flagellar hook-associated protein 3~PFAM: Flagellin, D0/D1 domain inference protein motif:TFAM:TIGR02550 db_xref InterPro:IPR001029 db_xref InterPro:IPR013384 4429257 4430471 gene locus_tag Alide2_4235 4429257 4430471 CDS product putative signal transduction protein transl_table 11 protein_id gb|AEB86550.1||gnl|jgi|Alide2_4235 note PFAM: Metal-dependent hydrolase HDOD~KEGG: ajs:Ajs_3839 putative signal transduction protein inference protein motif:PFAM:PF08668 db_xref InterPro:IPR013976 4430617 4431612 gene locus_tag Alide2_4236 4430617 4431612 CDS product 2-nitropropane dioxygenase NPD transl_table 11 protein_id gb|AEB86551.1||gnl|jgi|Alide2_4236 note PFAM: 2-nitropropane dioxygenase, NPD~KEGG: ajs:Ajs_3841 2-nitropropane dioxygenase, NPD inference protein motif:PFAM:PF03060 db_xref GO:0018580 db_xref InterPro:IPR004136 4433097 4431658 gene locus_tag Alide2_4237 4433097 4431658 CDS product transcriptional regulator, GntR family with aminotransferase domain transl_table 11 protein_id gb|AEB86552.1||gnl|jgi|Alide2_4237 note KEGG: dia:Dtpsy_3115 transcriptional regulator, GntR family with aminotransferase domain~PFAM: HTH transcriptional regulator, GntR; Aminotransferase, class I/classII~SMART: HTH transcriptional regulator, GntR inference protein motif:PFAM:PF00392 db_xref GO:0003700 db_xref GO:0030170 db_xref InterPro:IPR000524 db_xref InterPro:IPR004839 4433217 4433816 gene locus_tag Alide2_4238 4433217 4433816 CDS product Lysine exporter protein (LYSE/YGGA) transl_table 11 protein_id gb|AEB86553.1||gnl|jgi|Alide2_4238 note PFAM: Lysine exporter protein (LYSE/YGGA)~KEGG: ajs:Ajs_3843 hypothetical protein inference protein motif:PFAM:PF01810 db_xref InterPro:IPR001123 4433813 4434745 gene locus_tag Alide2_4239 4433813 4434745 CDS product protein of unknown function DUF6 transmembrane transl_table 11 protein_id gb|AEB86554.1||gnl|jgi|Alide2_4239 note PFAM: Drug/metabolite transporter~KEGG: vap:Vapar_0746 protein of unknown function DUF6 transmembrane inference protein motif:PFAM:PF00892 db_xref InterPro:IPR000620 4434860 4436041 gene locus_tag Alide2_4240 4434860 4436041 CDS product putative transcriptional regulator, GntR family transl_table 11 protein_id gb|AEB86555.1||gnl|jgi|Alide2_4240 note PFAM: Aminotransferase, class I/classII~KEGG: ajs:Ajs_3845 GntR family transcriptional regulator inference protein motif:PFAM:PF00155 db_xref GO:0004040 db_xref GO:0030170 db_xref InterPro:IPR004839 4436056 4436931 gene locus_tag Alide2_4241 4436056 4436931 CDS product phenazine biosynthesis protein PhzF family transl_table 11 protein_id gb|AEB86556.1||gnl|jgi|Alide2_4241 note KEGG: dia:Dtpsy_3119 phenazine biosynthesis protein PhzF family~TIGRFAM: Phenazine biosynthesis PhzC/PhzF protein~PFAM: Phenazine biosynthesis PhzC/PhzF protein inference protein motif:TFAM:TIGR00654 db_xref GO:0003824 db_xref InterPro:IPR003719 4436928 4437902 gene locus_tag Alide2_4242 4436928 4437902 CDS product Threonine ammonia-lyase EC_number 4.3.1.19 transl_table 11 protein_id gb|AEB86557.1||gnl|jgi|Alide2_4242 note KEGG: dia:Dtpsy_3120 hypothetical protein~PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit inference protein motif:PRIAM:4.3.1.19 db_xref InterPro:IPR001926 4438099 4439187 gene locus_tag Alide2_4243 4438099 4439187 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86558.1||gnl|jgi|Alide2_4243 note KEGG: dia:Dtpsy_3121 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_3121 4439213 4440454 gene locus_tag Alide2_4244 4439213 4440454 CDS product Extracellular ligand-binding receptor transl_table 11 protein_id gb|AEB86559.1||gnl|jgi|Alide2_4244 note PFAM: Extracellular ligand-binding receptor~KEGG: dia:Dtpsy_3122 extracellular ligand-binding receptor inference protein motif:PFAM:PF01094 db_xref InterPro:IPR001828 4440451 4441578 gene locus_tag Alide2_4245 4440451 4441578 CDS product NAD-dependent epimerase/dehydratase transl_table 11 protein_id gb|AEB86560.1||gnl|jgi|Alide2_4245 note PFAM: NAD-dependent epimerase/dehydratase~KEGG: dia:Dtpsy_3123 short-chain dehydrogenase/reductase SDR inference protein motif:PFAM:PF01370 db_xref GO:0003824 db_xref GO:0050662 db_xref InterPro:IPR001509 4441608 4442321 gene locus_tag Alide2_4246 4441608 4442321 CDS product Phosphoglycerate mutase transl_table 11 protein_id gb|AEB86561.1||gnl|jgi|Alide2_4246 note KEGG: dia:Dtpsy_3124 phosphoglycerate mutase~PFAM: Histidine phosphatase superfamily, clade-1~SMART: Histidine phosphatase superfamily, clade-1 inference protein motif:PFAM:PF00300 db_xref InterPro:IPR013078 4443502 4442312 gene locus_tag Alide2_4247 4443502 4442312 CDS product diguanylate cyclase transl_table 11 protein_id gb|AEB86562.1||gnl|jgi|Alide2_4247 note TIGRFAM: Diguanylate cyclase, predicted~PFAM: Diguanylate cyclase, predicted~KEGG: pmy:Pmen_1813 diguanylate cyclase~SMART: Diguanylate cyclase, predicted inference protein motif:TFAM:TIGR00254 db_xref InterPro:IPR000160 4444081 4443578 gene locus_tag Alide2_4248 4444081 4443578 CDS product nuclear export factor GLE1 transl_table 11 protein_id gb|AEB86563.1||gnl|jgi|Alide2_4248 note PFAM: GLE1, N-terminal, bacteria~KEGG: vap:Vapar_4773 protein of unknown function DUF461 inference protein motif:PFAM:PF07987 db_xref InterPro:IPR012533 4446423 4444105 gene locus_tag Alide2_4249 4446423 4444105 CDS product TonB-dependent receptor transl_table 11 protein_id gb|AEB86564.1||gnl|jgi|Alide2_4249 note PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug~KEGG: ctt:CtCNB1_0607 TonB-dependent receptor inference protein motif:PFAM:PF00593 db_xref GO:0004872 db_xref GO:0005215 db_xref InterPro:IPR000531 db_xref InterPro:IPR012910 4446930 4446583 gene locus_tag Alide2_4250 4446930 4446583 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86565.1||gnl|jgi|Alide2_4250 note KEGG: vap:Vapar_2119 hypothetical protein inference similar to AA sequence:KEGG:Vapar_2119 4447883 4447026 gene locus_tag Alide2_4251 4447883 4447026 CDS product Creatininase transl_table 11 protein_id gb|AEB86566.1||gnl|jgi|Alide2_4251 note PFAM: Creatininase~KEGG: dia:Dtpsy_3125 creatininase inference protein motif:PFAM:PF02633 db_xref InterPro:IPR003785 4448880 4447900 gene locus_tag Alide2_4252 4448880 4447900 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86567.1||gnl|jgi|Alide2_4252 note KEGG: dac:Daci_0588 hypothetical protein inference similar to AA sequence:KEGG:Daci_0588 db_xref InterPro:IPR005064 db_xref InterPro:IPR006311 4449161 4451263 gene locus_tag Alide2_4253 4449161 4451263 CDS product Protein-disulfide reductase EC_number 1.8.1.8 transl_table 11 protein_id gb|AEB86568.1||gnl|jgi|Alide2_4253 note KEGG: dia:Dtpsy_3127 cytochrome c biogenesis protein transmembrane region~PFAM: Cytochrome c assembly protein, transmembrane domain inference protein motif:PRIAM:1.8.1.8 db_xref InterPro:IPR003834 4451283 4451879 gene locus_tag Alide2_4254 4451283 4451879 CDS product alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen transl_table 11 protein_id gb|AEB86569.1||gnl|jgi|Alide2_4254 note PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant~KEGG: vap:Vapar_0729 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen inference protein motif:PFAM:PF00578 db_xref GO:0016209 db_xref GO:0016491 db_xref InterPro:IPR000866 4452662 4451916 gene locus_tag Alide2_4255 4452662 4451916 CDS product protein of unknown function DUF81 transl_table 11 protein_id gb|AEB86570.1||gnl|jgi|Alide2_4255 note PFAM: Protein of unknown function DUF81~KEGG: har:HEAR3236 hypothetical protein inference protein motif:PFAM:PF01925 db_xref InterPro:IPR002781 4452926 4453954 gene locus_tag Alide2_4256 4452926 4453954 CDS product Peptidoglycan-binding domain 1 protein transl_table 11 protein_id gb|AEB86571.1||gnl|jgi|Alide2_4256 note PFAM: Peptidoglycan binding-like; YkuD domain~KEGG: bpt:Bpet1138 peptidoglycan binding-like domain-containing protein inference protein motif:PFAM:PF01471 db_xref InterPro:IPR002477 db_xref InterPro:IPR005490 4453997 4455115 gene locus_tag Alide2_4257 4453997 4455115 CDS product uroporphyrinogen decarboxylase EC_number 4.1.1.37 transl_table 11 protein_id gb|AEB86572.1||gnl|jgi|Alide2_4257 note TIGRFAM: Uroporphyrinogen decarboxylase HemE~KEGG: ajs:Ajs_3861 uroporphyrinogen decarboxylase~PFAM: Uroporphyrinogen decarboxylase (URO-D) inference protein motif:TFAM:TIGR01464 db_xref GO:0004853 db_xref InterPro:IPR000257 db_xref InterPro:IPR006361 4455731 4457839 gene locus_tag Alide2_4258 4455731 4457839 CDS product primosomal protein N' transl_table 11 protein_id gb|AEB86573.1||gnl|jgi|Alide2_4258 note TIGRFAM: Primosomal protein n~PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal~KEGG: dia:Dtpsy_3135 primosomal protein N'~SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal inference protein motif:TFAM:TIGR00595 db_xref GO:0003677 db_xref InterPro:IPR001650 db_xref InterPro:IPR005259 db_xref InterPro:IPR011545 db_xref InterPro:IPR014001 4459089 4457902 gene locus_tag Alide2_4259 4459089 4457902 CDS product acetyl-CoA acetyltransferase EC_number 2.3.1.9 transl_table 11 protein_id gb|AEB86574.1||gnl|jgi|Alide2_4259 note TIGRFAM: Thiolase~KEGG: dia:Dtpsy_0032 beta-ketothiolase~PFAM: Thiolase, N-terminal; Thiolase, C-terminal inference protein motif:TFAM:TIGR01930 db_xref GO:0005524 db_xref InterPro:IPR002155 db_xref InterPro:IPR020616 db_xref InterPro:IPR020617 4459880 4459101 gene locus_tag Alide2_4260 4459880 4459101 CDS product Enoyl-CoA hydratase/isomerase transl_table 11 protein_id gb|AEB86575.1||gnl|jgi|Alide2_4260 note PFAM: Crotonase, core~KEGG: dac:Daci_0026 enoyl-CoA hydratase/isomerase inference protein motif:PFAM:PF00378 db_xref GO:0003824 db_xref InterPro:IPR001753 4461741 4459942 gene locus_tag Alide2_4261 4461741 4459942 CDS product Long-chain-fatty-acid--CoA ligase EC_number 6.2.1.3 transl_table 11 protein_id gb|AEB86576.1||gnl|jgi|Alide2_4261 note KEGG: dac:Daci_0027 AMP-dependent synthetase/ligase~PFAM: AMP-dependent synthetase/ligase inference protein motif:PRIAM:6.2.1.3 db_xref InterPro:IPR000873 4462559 4461738 gene locus_tag Alide2_4262 4462559 4461738 CDS product ABC transporter related protein transl_table 11 protein_id gb|AEB86577.1||gnl|jgi|Alide2_4262 note KEGG: xtr:100489501 high-affinity branched-chain amino acid transport ATP-binding protein livF-like~PFAM: ABC transporter-like~SMART: ATPase, AAA+ type, core inference protein motif:PFAM:PF00005 db_xref GO:0005524 db_xref GO:0016887 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 4463749 4462568 gene locus_tag Alide2_4263 4463749 4462568 CDS product Extracellular ligand-binding receptor transl_table 11 protein_id gb|AEB86578.1||gnl|jgi|Alide2_4263 note PFAM: Extracellular ligand-binding receptor~KEGG: dac:Daci_0029 extracellular ligand-binding receptor inference protein motif:PFAM:PF01094 db_xref InterPro:IPR001828 4464798 4463761 gene locus_tag Alide2_4264 4464798 4463761 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB86579.1||gnl|jgi|Alide2_4264 note PFAM: ABC transporter permease~KEGG: rfr:Rfer_4064 inner-membrane translocator inference protein motif:PFAM:PF02653 db_xref GO:0005215 db_xref InterPro:IPR001851 4465679 4464798 gene locus_tag Alide2_4265 4465679 4464798 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB86580.1||gnl|jgi|Alide2_4265 note PFAM: ABC transporter permease~KEGG: dac:Daci_0031 inner-membrane translocator inference protein motif:PFAM:PF02653 db_xref GO:0005215 db_xref InterPro:IPR001851 4466530 4465676 gene locus_tag Alide2_4266 4466530 4465676 CDS product Sulfate-transporting ATPase EC_number 3.6.3.25 transl_table 11 protein_id gb|AEB86581.1||gnl|jgi|Alide2_4266 note PFAM: ABC transporter-like~KEGG: dac:Daci_0032 ABC transporter-like protein~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.25 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 4466664 4467371 gene locus_tag Alide2_4267 4466664 4467371 CDS product transcriptional regulator, TetR family transl_table 11 protein_id gb|AEB86582.1||gnl|jgi|Alide2_4267 note PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal~KEGG: dac:Daci_0033 TetR family transcriptional regulator inference protein motif:PFAM:PF00440 db_xref GO:0003700 db_xref InterPro:IPR001647 4468370 4467366 gene locus_tag Alide2_4268 4468370 4467366 CDS product Auxin Efflux Carrier transl_table 11 protein_id gb|AEB86583.1||gnl|jgi|Alide2_4268 note PFAM: Auxin efflux carrier~KEGG: ajs:Ajs_3864 auxin efflux carrier inference protein motif:PFAM:PF03547 db_xref InterPro:IPR004776 4468473 4470533 gene locus_tag Alide2_4269 4468473 4470533 CDS product UvrD/REP helicase transl_table 11 protein_id gb|AEB86584.1||gnl|jgi|Alide2_4269 note PFAM: DNA helicase, UvrD/REP type~KEGG: dia:Dtpsy_3138 UvrD/REP helicase inference protein motif:PFAM:PF00580 db_xref GO:0003677 db_xref GO:0004003 db_xref GO:0005524 db_xref InterPro:IPR000212 4470539 4470964 gene locus_tag Alide2_4270 4470539 4470964 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86585.1||gnl|jgi|Alide2_4270 note manually curated~KEGG: dia:Dtpsy_3139 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_3139 4470961 4472130 gene locus_tag Alide2_4271 4470961 4472130 CDS product Phospholipase A(1) EC_number 3.1.1.32 transl_table 11 protein_id gb|AEB86586.1||gnl|jgi|Alide2_4271 note KEGG: dia:Dtpsy_3140 phospholipase A1~PFAM: Phospholipase A1 inference protein motif:PRIAM:3.1.1.32 db_xref InterPro:IPR003187 4473270 4472143 gene locus_tag Alide2_4272 4473270 4472143 CDS product Sulphatase-modifying factor protein transl_table 11 protein_id gb|AEB86587.1||gnl|jgi|Alide2_4272 note PFAM: Sulphatase-modifying factor~KEGG: axy:AXYL_03118 hypothetical protein inference protein motif:PFAM:PF03781 db_xref InterPro:IPR005532 4475101 4473302 gene locus_tag Alide2_4273 4475101 4473302 CDS product sulfatase transl_table 11 protein_id gb|AEB86588.1||gnl|jgi|Alide2_4273 note PFAM: Sulfatase~KEGG: axy:AXYL_03117 arylsulfatase inference protein motif:PFAM:PF00884 db_xref GO:0008484 db_xref InterPro:IPR000917 4476140 4475199 gene locus_tag Alide2_4274 4476140 4475199 CDS product Catechol 2,3-dioxygenase EC_number 1.13.11.2 transl_table 11 protein_id gb|AEB86589.1||gnl|jgi|Alide2_4274 note KEGG: axy:AXYL_03122 metapyrocatechase~PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase inference protein motif:PRIAM:1.13.11.2 db_xref InterPro:IPR004360 4477933 4476170 gene locus_tag Alide2_4275 4477933 4476170 CDS product 2,4-dichlorophenol 6-monooxygenase EC_number 1.14.13.20 transl_table 11 protein_id gb|AEB86590.1||gnl|jgi|Alide2_4275 note KEGG: reu:Reut_B4679 monooxygenase, FAD-binding~PFAM: Monooxygenase, FAD-binding inference protein motif:PRIAM:1.14.13.20 db_xref InterPro:IPR002938 4478821 4477973 gene locus_tag Alide2_4276 4478821 4477973 CDS product Ureidoglycolate lyase EC_number 4.3.2.3 transl_table 11 protein_id gb|AEB86591.1||gnl|jgi|Alide2_4276 note KEGG: reu:Reut_B4678 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase~PFAM: Fumarylacetoacetase, C-terminal-like inference protein motif:PRIAM:4.3.2.3 db_xref InterPro:IPR002529 4480037 4478895 gene locus_tag Alide2_4277 4480037 4478895 CDS product porin transl_table 11 protein_id gb|AEB86592.1||gnl|jgi|Alide2_4277 note KEGG: vap:Vapar_4252 porin inference similar to AA sequence:KEGG:Vapar_4252 4480234 4480932 gene locus_tag Alide2_4278 4480234 4480932 CDS product transcriptional regulator, GntR family transl_table 11 protein_id gb|AEB86593.1||gnl|jgi|Alide2_4278 note KEGG: axy:AXYL_03119 GntR family regulatory protein 35~PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR~SMART: GntR, C-terminal; HTH transcriptional regulator, GntR inference protein motif:PFAM:PF07729 db_xref GO:0003700 db_xref InterPro:IPR000524 db_xref InterPro:IPR011711 4481178 4481564 gene locus_tag Alide2_4279 4481178 4481564 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86594.1||gnl|jgi|Alide2_4279 note KEGG: dia:Dtpsy_3141 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_3141 4482118 4481642 gene locus_tag Alide2_4280 4482118 4481642 CDS product UspA domain-containing protein transl_table 11 protein_id gb|AEB86595.1||gnl|jgi|Alide2_4280 note PFAM: UspA~KEGG: dia:Dtpsy_3142 UspA domain protein inference protein motif:PFAM:PF00582 db_xref InterPro:IPR006016 4482178 4483350 gene locus_tag Alide2_4281 4482178 4483350 CDS product Queuine tRNA-ribosyltransferase EC_number 2.4.2.29 transl_table 11 protein_id gb|AEB86596.1||gnl|jgi|Alide2_4281 note PFAM: Queuine/other tRNA-ribosyltransferase~TIGRFAM: Queuine tRNA-ribosyltransferase; Queuine/other tRNA-ribosyltransferase~HAMAP: Queuine tRNA-ribosyltransferase~KEGG: dia:Dtpsy_3143 queuine tRNA-ribosyltransferase inference protein motif:HAMAP:MF_00168 db_xref InterPro:IPR002616 db_xref InterPro:IPR004803 4484398 4483355 gene locus_tag Alide2_4282 4484398 4483355 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86597.1||gnl|jgi|Alide2_4282 note KEGG: dia:Dtpsy_3145 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_3145 4484521 4484934 gene locus_tag Alide2_4283 4484521 4484934 CDS product PAS sensor protein transl_table 11 protein_id gb|AEB86598.1||gnl|jgi|Alide2_4283 note TIGRFAM: PAS~PFAM: PAS fold~KEGG: dar:Daro_3803 PAS~SMART: PAS; PAC motif inference protein motif:TFAM:TIGR00229 db_xref GO:0004871 db_xref InterPro:IPR000014 db_xref InterPro:IPR001610 db_xref InterPro:IPR013767 4485379 4486209 gene locus_tag Alide2_4284 4485379 4486209 CDS product 6-phosphogluconate dehydrogenase NAD-binding protein transl_table 11 protein_id gb|AEB86599.1||gnl|jgi|Alide2_4284 note PFAM: 6-phosphogluconate dehydrogenase, NAD-binding~KEGG: dac:Daci_4431 6-phosphogluconate dehydrogenase NAD-binding inference protein motif:PFAM:PF03446 db_xref GO:0004616 db_xref InterPro:IPR006115 4486259 4487227 gene locus_tag Alide2_4285 4486259 4487227 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86600.1||gnl|jgi|Alide2_4285 note KEGG: dac:Daci_4430 hypothetical protein inference similar to AA sequence:KEGG:Daci_4430 db_xref InterPro:IPR005064 4487346 4488326 gene locus_tag Alide2_4286 4487346 4488326 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86601.1||gnl|jgi|Alide2_4286 note KEGG: dac:Daci_5794 hypothetical protein inference similar to AA sequence:KEGG:Daci_5794 db_xref InterPro:IPR005064 4488380 4489054 gene locus_tag Alide2_4287 4488380 4489054 CDS product Dimethylmenaquinone methyltransferase transl_table 11 protein_id gb|AEB86602.1||gnl|jgi|Alide2_4287 note PFAM: Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase~KEGG: dac:Daci_4429 hypothetical protein inference protein motif:PFAM:PF03737 db_xref InterPro:IPR005493 4489718 4489023 gene locus_tag Alide2_4288 4489718 4489023 CDS product transcriptional regulator, GntR family transl_table 11 protein_id gb|AEB86603.1||gnl|jgi|Alide2_4288 note KEGG: bpt:Bpet0387 GntR family transcriptional regulator~PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR~SMART: GntR, C-terminal; HTH transcriptional regulator, GntR inference protein motif:PFAM:PF07729 db_xref GO:0003700 db_xref InterPro:IPR000524 db_xref InterPro:IPR011711 4491681 4489738 gene locus_tag Alide2_4289 4491681 4489738 CDS product phospholipid/glycerol acyltransferase transl_table 11 protein_id gb|AEB86604.1||gnl|jgi|Alide2_4289 note KEGG: ajs:Ajs_3878 phospholipid/glycerol acyltransferase~PFAM: Phospholipid/glycerol acyltransferase; Major facilitator superfamily MFS-1~SMART: Phospholipid/glycerol acyltransferase inference protein motif:PFAM:PF01553 db_xref GO:0008415 db_xref InterPro:IPR002123 db_xref InterPro:IPR011701 4491871 4493751 gene locus_tag Alide2_4290 4491871 4493751 CDS product ATP-dependent metalloprotease FtsH EC_number 3.6.4.3 transl_table 11 protein_id gb|AEB86605.1||gnl|jgi|Alide2_4290 note SMART: ATPase, AAA+ type, core~TIGRFAM: Peptidase M41, FtsH~KEGG: pna:Pnap_0392 ATP-dependent metalloprotease FtsH~PFAM: ATPase, AAA-type, core; Peptidase M41, FtsH extracellular; Peptidase M41 inference protein motif:TFAM:TIGR01241 db_xref GO:0004222 db_xref InterPro:IPR000642 db_xref InterPro:IPR003593 db_xref InterPro:IPR003959 db_xref InterPro:IPR005936 db_xref InterPro:IPR011546 4493840 4494406 gene locus_tag Alide2_4291 4493840 4494406 CDS product phosphoribosyltransferase transl_table 11 protein_id gb|AEB86606.1||gnl|jgi|Alide2_4291 note PFAM: Phosphoribosyltransferase~KEGG: tbd:Tbd_0103 transcriptional regulator PyrR, putative inference protein motif:PFAM:PF00156 db_xref InterPro:IPR000836 4494403 4495053 gene locus_tag Alide2_4292 4494403 4495053 CDS product phosphoribosyltransferase transl_table 11 protein_id gb|AEB86607.1||gnl|jgi|Alide2_4292 note KEGG: rfr:Rfer_0394 phosphoribosyltransferase inference similar to AA sequence:KEGG:Rfer_0394 4495705 4495055 gene locus_tag Alide2_4293 4495705 4495055 CDS product dienelactone hydrolase transl_table 11 protein_id gb|AEB86608.1||gnl|jgi|Alide2_4293 note PFAM: Dienelactone hydrolase~KEGG: rfr:Rfer_0395 dienelactone hydrolase inference protein motif:PFAM:PF01738 db_xref GO:0016787 db_xref InterPro:IPR002925 4496696 4495713 gene locus_tag Alide2_4294 4496696 4495713 CDS product zinc-binding alcohol dehydrogenase family protein transl_table 11 protein_id gb|AEB86609.1||gnl|jgi|Alide2_4294 note KEGG: azo:azo0111 putative alcohol dehydrogenase~TIGRFAM: Alcohol dehydrogenase, zinc-binding type 2~PFAM: Alcohol dehydrogenase GroES-like inference protein motif:TFAM:TIGR02822 db_xref InterPro:IPR013154 db_xref InterPro:IPR014187 4496911 4497900 gene locus_tag Alide2_4295 4496911 4497900 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86610.1||gnl|jgi|Alide2_4295 note KEGG: dia:Dtpsy_3156 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_3156 db_xref InterPro:IPR005064 4497923 4499389 gene locus_tag Alide2_4296 4497923 4499389 CDS product monooxygenase FAD-binding protein transl_table 11 protein_id gb|AEB86611.1||gnl|jgi|Alide2_4296 note PFAM: Monooxygenase, FAD-binding~KEGG: ajs:Ajs_3884 FAD dependent oxidoreductase inference protein motif:PFAM:PF01494 db_xref GO:0004497 db_xref InterPro:IPR002938 4499386 4500492 gene locus_tag Alide2_4297 4499386 4500492 CDS product uncharacterized peroxidase-related enzyme transl_table 11 protein_id gb|AEB86612.1||gnl|jgi|Alide2_4297 note KEGG: ajs:Ajs_3885 uncharacterized peroxidase-related enzyme~TIGRFAM: Uncharacterised peroxidase-related; Alkylhydroperoxidase AhpD core~PFAM: Carboxymuconolactone decarboxylase inference protein motif:TFAM:TIGR01926 db_xref InterPro:IPR003779 db_xref InterPro:IPR004675 db_xref InterPro:IPR010195 4501802 4500552 gene locus_tag Alide2_4298 4501802 4500552 CDS product domain of unknown function DUF1745 transl_table 11 protein_id gb|AEB86613.1||gnl|jgi|Alide2_4298 note KEGG: dia:Dtpsy_3160 domain of unknown function DUF1745~PFAM: FIST domain, N-terminal; FIST C domain~SMART: FIST domain, N-terminal inference protein motif:PFAM:PF08495 db_xref InterPro:IPR013702 db_xref InterPro:IPR019494 4502609 4501827 gene locus_tag Alide2_4299 4502609 4501827 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86614.1||gnl|jgi|Alide2_4299 note KEGG: dia:Dtpsy_3161 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_3161 4502837 4503268 gene locus_tag Alide2_4300 4502837 4503268 CDS product histone family protein DNA-binding protein transl_table 11 protein_id gb|AEB86615.1||gnl|jgi|Alide2_4300 note PFAM: Histone-like bacterial DNA-binding protein~KEGG: dia:Dtpsy_3162 histone family protein DNA-binding protein inference protein motif:PFAM:PF00216 db_xref GO:0003677 db_xref InterPro:IPR000119 4504078 4503326 gene locus_tag Alide2_4301 4504078 4503326 CDS product protein tyrosine/serine phosphatase transl_table 11 protein_id gb|AEB86616.1||gnl|jgi|Alide2_4301 note KEGG: ajs:Ajs_3890 protein tyrosine/serine phosphatase inference similar to AA sequence:KEGG:Ajs_3890 4504860 4504592 gene locus_tag Alide2_4302 pseudo 4506151 4504874 gene locus_tag Alide2_4303 4506151 4504874 CDS product HipA N-terminal domain protein transl_table 11 protein_id gb|AEB86617.1||gnl|jgi|Alide2_4303 note KEGG: neu:NE1310 HipA protein~TIGRFAM: HipA, N-terminal~PFAM: HipA-like, C-terminal; HipA-like, N-terminal inference protein motif:TFAM:TIGR03071 db_xref InterPro:IPR012893 db_xref InterPro:IPR012894 db_xref InterPro:IPR017508 4506393 4506148 gene locus_tag Alide2_4304 4506393 4506148 CDS product transcriptional regulator, y4mF family transl_table 11 protein_id gb|AEB86618.1||gnl|jgi|Alide2_4304 note TIGRFAM: Transcription regulator, HipB-like~PFAM: Helix-turn-helix type 3~KEGG: neu:NE1311 helix-hairpin-helix DNA-binding motif-containing protein~SMART: Helix-turn-helix type 3 inference protein motif:TFAM:TIGR03070 db_xref InterPro:IPR001387 db_xref InterPro:IPR017507 4506766 4506596 gene locus_tag Alide2_4305 pseudo 4507817 4506780 gene locus_tag Alide2_4306 pseudo 4508028 4509158 gene locus_tag Alide2_4307 4508028 4509158 CDS product putative transposase transl_table 11 protein_id gb|AEB86619.1||gnl|jgi|Alide2_4307 note KEGG: pol:Bpro_2745 putative transposase inference similar to AA sequence:KEGG:Bpro_2745 4509124 4509417 gene locus_tag Alide2_4308 4509124 4509417 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86620.1||gnl|jgi|Alide2_4308 note KEGG: pol:Bpro_2744 hypothetical protein inference similar to AA sequence:KEGG:Bpro_2744 4510898 4509693 gene locus_tag Alide2_4309 4510898 4509693 CDS product transposase IS4 family protein transl_table 11 protein_id gb|AEB86621.1||gnl|jgi|Alide2_4309 note PFAM: Transposase, IS4-like~KEGG: bvi:Bcep1808_6138 transposase, IS4 family protein inference protein motif:PFAM:PF01609 db_xref GO:0003677 db_xref GO:0004803 db_xref InterPro:IPR002559 4510974 4511732 gene locus_tag Alide2_4310 4510974 4511732 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86622.1||gnl|jgi|Alide2_4310 note KEGG: pna:Pnap_4724 transposase inference similar to AA sequence:KEGG:Pnap_4724 4512651 4511761 gene locus_tag Alide2_4311 4512651 4511761 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86623.1||gnl|jgi|Alide2_4311 note KEGG: ajs:Ajs_2099 putative signal peptide inference similar to AA sequence:KEGG:Ajs_2099 4513505 4512753 gene locus_tag Alide2_4312 4513505 4512753 CDS product Cyclopentanol dehydrogenase EC_number 1.1.1.163 transl_table 11 protein_id gb|AEB86624.1||gnl|jgi|Alide2_4312 note KEGG: ajs:Ajs_2100 short-chain dehydrogenase/reductase SDR~PFAM: Short-chain dehydrogenase/reductase SDR inference protein motif:PRIAM:1.1.1.163 db_xref InterPro:IPR002198 4514492 4513578 gene locus_tag Alide2_4313 4514492 4513578 CDS product Integrase catalytic region transl_table 11 protein_id gb|AEB86625.1||gnl|jgi|Alide2_4313 note PFAM: Integrase, catalytic core~KEGG: rpf:Rpic12D_2820 integrase catalytic region inference protein motif:PFAM:PF00665 db_xref GO:0003677 db_xref InterPro:IPR001584 4514812 4514489 gene locus_tag Alide2_4314 4514812 4514489 CDS product transposase IS3/IS911 family protein transl_table 11 protein_id gb|AEB86626.1||gnl|jgi|Alide2_4314 note PFAM: Transposase IS3/IS911family~KEGG: ajs:Ajs_0906 transposase IS3/IS911 family protein inference protein motif:PFAM:PF01527 db_xref GO:0003677 db_xref GO:0004803 db_xref InterPro:IPR002514 4514972 4516498 gene locus_tag Alide2_4315 4514972 4516498 CDS product Integrase catalytic region transl_table 11 protein_id gb|AEB86627.1||gnl|jgi|Alide2_4315 note PFAM: Integrase, catalytic core~KEGG: axy:AXYL_06593 integrase family protein 10 inference protein motif:PFAM:PF00665 db_xref GO:0003677 db_xref InterPro:IPR001584 4516488 4517291 gene locus_tag Alide2_4316 4516488 4517291 CDS product IstB domain protein ATP-binding protein transl_table 11 protein_id gb|AEB86628.1||gnl|jgi|Alide2_4316 note KEGG: axy:AXYL_06594 IstB-like ATP binding family protein 3~PFAM: IstB-like ATP-binding protein~SMART: ATPase, AAA+ type, core inference protein motif:PFAM:PF01695 db_xref GO:0005524 db_xref InterPro:IPR002611 db_xref InterPro:IPR003593 4517810 4517418 gene locus_tag Alide2_4317 4517810 4517418 CDS product cytochrome c class I transl_table 11 protein_id gb|AEB86629.1||gnl|jgi|Alide2_4317 note KEGG: azc:AZC_0960 cytochrome c~manually curated~PFAM: Cytochrome c, class I inference protein motif:PFAM:PF00034 db_xref GO:0005506 db_xref GO:0009055 db_xref GO:0020037 db_xref InterPro:IPR003088 4519785 4518046 gene locus_tag Alide2_4318 4519785 4518046 CDS product fumarate reductase/succinate dehydrogenase flavoprotein domain protein transl_table 11 protein_id gb|AEB86630.1||gnl|jgi|Alide2_4318 note PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal~KEGG: cwo:Cwoe_1511 fumarate reductase/succinate dehydrogenase flavoprotein domain protein inference protein motif:PFAM:PF00890 db_xref GO:0009055 db_xref GO:0016491 db_xref InterPro:IPR003953 db_xref InterPro:IPR006311 4520486 4519890 gene locus_tag Alide2_4319 4520486 4519890 CDS product carbon monoxide dehydrogenase subunit G transl_table 11 protein_id gb|AEB86631.1||gnl|jgi|Alide2_4319 note PFAM: Carbon monoxide dehydrogenase subunit G~KEGG: pol:Bpro_0573 carbon monoxide dehydrogenase subunit G inference protein motif:PFAM:PF06240 db_xref InterPro:IPR010419 4523009 4520535 gene locus_tag Alide2_4320 4523009 4520535 CDS product Carbon-monoxide dehydrogenase (acceptor) EC_number 1.2.99.2 transl_table 11 protein_id gb|AEB86632.1||gnl|jgi|Alide2_4320 note KEGG: sti:Sthe_2310 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein~PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead inference protein motif:PRIAM:1.2.99.2 db_xref InterPro:IPR000674 db_xref InterPro:IPR008274 4523503 4523006 gene locus_tag Alide2_4321 4523503 4523006 CDS product Carbon-monoxide dehydrogenase (acceptor) EC_number 1.2.99.2 transl_table 11 protein_id gb|AEB86633.1||gnl|jgi|Alide2_4321 note KEGG: tro:trd_0578 aldehyde oxidase small subunit~PFAM: [2Fe-2S]-binding; Ferredoxin inference protein motif:PRIAM:1.2.99.2 db_xref InterPro:IPR001041 db_xref InterPro:IPR002888 4524415 4523537 gene locus_tag Alide2_4322 4524415 4523537 CDS product Carbon-monoxide dehydrogenase (acceptor) EC_number 1.2.99.2 transl_table 11 protein_id gb|AEB86634.1||gnl|jgi|Alide2_4322 note KEGG: sti:Sthe_2813 molybdopterin dehydrogenase FAD-binding protein~PFAM: Molybdopterin dehydrogenase, FAD-binding inference protein motif:PRIAM:1.2.99.2 db_xref InterPro:IPR002346 4524957 4525880 gene locus_tag Alide2_4323 4524957 4525880 CDS product peptidase S15 transl_table 11 protein_id gb|AEB86635.1||gnl|jgi|Alide2_4323 note KEGG: cwo:Cwoe_3936 peptidase S15 inference similar to AA sequence:KEGG:Cwoe_3936 db_xref InterPro:IPR000383 4526102 4527013 gene locus_tag Alide2_4324 4526102 4527013 CDS product ATPase associated with various cellular activities AAA_5 transl_table 11 protein_id gb|AEB86636.1||gnl|jgi|Alide2_4324 note KEGG: ctt:CtCNB1_3512 ATPase associated with various cellular~PFAM: ATPase, AAA-5~SMART: ATPase, AAA+ type, core inference protein motif:PFAM:PF07728 db_xref GO:0005524 db_xref GO:0016887 db_xref InterPro:IPR003593 db_xref InterPro:IPR011704 4527031 4527519 gene locus_tag Alide2_4325 4527031 4527519 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86637.1||gnl|jgi|Alide2_4325 note KEGG: dac:Daci_2252 VWA containing CoxE family protein inference similar to AA sequence:KEGG:Daci_2252 4527537 4528088 gene locus_tag Alide2_4326 4527537 4528088 CDS product carbon monoxide dehydrogenase subunit G transl_table 11 protein_id gb|AEB86638.1||gnl|jgi|Alide2_4326 note PFAM: Carbon monoxide dehydrogenase subunit G~KEGG: pol:Bpro_0573 carbon monoxide dehydrogenase subunit G inference protein motif:PFAM:PF06240 db_xref InterPro:IPR010419 4528091 4529131 gene locus_tag Alide2_4327 4528091 4529131 CDS product XshC-Cox1-family protein transl_table 11 protein_id gb|AEB86639.1||gnl|jgi|Alide2_4327 note PFAM: XdhC- CoxI~KEGG: pol:Bpro_0572 hypothetical protein inference protein motif:PFAM:PF02625 db_xref InterPro:IPR003777 4529131 4529805 gene locus_tag Alide2_4328 4529131 4529805 CDS product molybdenum cofactor cytidylyltransferase transl_table 11 protein_id gb|AEB86640.1||gnl|jgi|Alide2_4328 note KEGG: aeh:Mlg_1568 molybdenum cofactor cytidylyltransferase inference similar to AA sequence:KEGG:Mlg_1568 4529994 4529848 gene locus_tag Alide2_4329 pseudo 4530108 4530013 gene locus_tag Alide2_4330 pseudo 4530856 4530134 gene locus_tag Alide2_4331 4530856 4530134 CDS product regulatory protein TetR transl_table 11 protein_id gb|AEB86641.1||gnl|jgi|Alide2_4331 note PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal~KEGG: cak:Caul_0225 TetR family transcriptional regulator inference protein motif:PFAM:PF00440 db_xref GO:0003700 db_xref InterPro:IPR001647 4531764 4530853 gene locus_tag Alide2_4332 4531764 4530853 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86642.1||gnl|jgi|Alide2_4332 note KEGG: cti:RALTA_B1677 conserved hypothetical protein; UPF0065 inference similar to AA sequence:KEGG:RALTA_B1677 db_xref InterPro:IPR005064 4532155 4533081 gene locus_tag Alide2_4333 4532155 4533081 CDS product peptidase S15 transl_table 11 protein_id gb|AEB86643.1||gnl|jgi|Alide2_4333 note KEGG: cwo:Cwoe_3936 peptidase S15 inference similar to AA sequence:KEGG:Cwoe_3936 db_xref InterPro:IPR000383 4533148 4534941 gene locus_tag Alide2_4334 4533148 4534941 CDS product acyl-CoA dehydrogenase domain-containing protein transl_table 11 protein_id gb|AEB86644.1||gnl|jgi|Alide2_4334 note PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal~KEGG: slo:Shew_2868 acyl-CoA dehydrogenase domain-containing protein inference protein motif:PFAM:PF00441 db_xref GO:0003995 db_xref InterPro:IPR006090 db_xref InterPro:IPR006091 db_xref InterPro:IPR006092 4534938 4537037 gene locus_tag Alide2_4335 4534938 4537037 CDS product 3-hydroxybutyryl-CoA epimerase EC_number 5.1.2.3 transl_table 11 protein_id gb|AEB86645.1||gnl|jgi|Alide2_4335 note manually curated~KEGG: xtr:100493475 peroxisomal bifunctional enzyme-like~PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; Crotonase, core; 3-hydroxyacyl-CoA dehydrogenase, C-terminal inference protein motif:PRIAM:5.1.2.3 db_xref InterPro:IPR001753 db_xref InterPro:IPR006108 db_xref InterPro:IPR006176 4537034 4538221 gene locus_tag Alide2_4336 4537034 4538221 CDS product acetyl-CoA acetyltransferase EC_number 2.3.1.16 transl_table 11 protein_id gb|AEB86646.1||gnl|jgi|Alide2_4336 note TIGRFAM: Thiolase~KEGG: vap:Vapar_5357 acetyl-CoA acetyltransferase~PFAM: Thiolase, N-terminal; Thiolase, C-terminal inference protein motif:TFAM:TIGR01930 db_xref GO:0003700 db_xref InterPro:IPR002155 db_xref InterPro:IPR020616 db_xref InterPro:IPR020617 4538218 4538991 gene locus_tag Alide2_4337 4538218 4538991 CDS product 3-oxoacyl-(acyl-carrier-protein) reductase EC_number 1.1.1.100 transl_table 11 protein_id gb|AEB86647.1||gnl|jgi|Alide2_4337 note KEGG: reu:Reut_C6403 short-chain dehydrogenase/reductase SDR~PFAM: Short-chain dehydrogenase/reductase SDR inference protein motif:PRIAM:1.1.1.100 db_xref InterPro:IPR002198 4538982 4540586 gene locus_tag Alide2_4338 4538982 4540586 CDS product o-succinylbenzoate--CoA ligase EC_number 6.2.1.26 transl_table 11 protein_id gb|AEB86648.1||gnl|jgi|Alide2_4338 note KEGG: psa:PST_1119 long-chain-fatty-acid--CoA ligase~PFAM: AMP-dependent synthetase/ligase inference protein motif:PRIAM:6.2.1.26 db_xref InterPro:IPR000873 4540583 4542118 gene locus_tag Alide2_4339 4540583 4542118 CDS product Monosaccharide-transporting ATPase EC_number 3.6.3.17 transl_table 11 protein_id gb|AEB86649.1||gnl|jgi|Alide2_4339 note PFAM: ABC transporter-like~KEGG: azc:AZC_1416 sugar ABC transporter ATP-binding protein~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.17 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 4542120 4543064 gene locus_tag Alide2_4340 4542120 4543064 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB86650.1||gnl|jgi|Alide2_4340 note PFAM: ABC transporter permease~KEGG: reu:Reut_B4134 inner-membrane translocator inference protein motif:PFAM:PF02653 db_xref GO:0005215 db_xref InterPro:IPR001851 4543061 4544011 gene locus_tag Alide2_4341 4543061 4544011 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB86651.1||gnl|jgi|Alide2_4341 note PFAM: ABC transporter permease~KEGG: reu:Reut_B4135 inner-membrane translocator inference protein motif:PFAM:PF02653 db_xref GO:0005215 db_xref InterPro:IPR001851 4544051 4545031 gene locus_tag Alide2_4342 4544051 4545031 CDS product periplasmic binding protein/LacI transcriptional regulator transl_table 11 protein_id gb|AEB86652.1||gnl|jgi|Alide2_4342 note PFAM: Periplasmic binding protein/LacI transcriptional regulator~KEGG: azc:AZC_1419 ABC transporter sugar-binding protein inference protein motif:PFAM:PF00532 db_xref InterPro:IPR001761 4545229 4545561 gene locus_tag Alide2_4343 pseudo 4545748 4547127 gene locus_tag Alide2_4344 4545748 4547127 CDS product transposase IS4 family protein transl_table 11 protein_id gb|AEB86653.1||gnl|jgi|Alide2_4344 note PFAM: Transposase, IS4-like~KEGG: pol:Bpro_1661 IS4 family transposase inference protein motif:PFAM:PF01609 db_xref GO:0003677 db_xref GO:0004803 db_xref InterPro:IPR002559 4548671 4547544 gene locus_tag Alide2_4345 pseudo 4548864 4553138 gene locus_tag Alide2_4346 pseudo 4549755 4550947 gene locus_tag Alide2_4347 pseudo 4550944 4551876 gene locus_tag Alide2_4348 4550944 4551876 CDS product integrase family protein transl_table 11 protein_id gb|AEB86654.1||gnl|jgi|Alide2_4348 note PFAM: Integrase, catalytic core, phage~KEGG: tmz:Tmz1t_0371 integrase family protein inference protein motif:PFAM:PF00589 db_xref GO:0003677 db_xref InterPro:IPR002104 4551873 4552868 gene locus_tag Alide2_4349 4551873 4552868 CDS product integrase family protein transl_table 11 protein_id gb|AEB86655.1||gnl|jgi|Alide2_4349 note PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage~KEGG: tmz:Tmz1t_0370 integrase family protein inference protein motif:PFAM:PF00589 db_xref GO:0003677 db_xref InterPro:IPR002104 db_xref InterPro:IPR004107 4553149 4554339 gene locus_tag Alide2_4350 4553149 4554339 CDS product transposase transl_table 11 protein_id gb|AEB86656.1||gnl|jgi|Alide2_4350 note PFAM: Transposase, IS801/IS1294~KEGG: pol:Bpro_4805 putative transposase inference protein motif:PFAM:PF04986 db_xref GO:0003677 db_xref GO:0004803 db_xref InterPro:IPR007069 4554913 4554837 gene locus_tag Alide2_R0062 note tRNA-Met2 4554913 4554837 tRNA product tRNA-Met 4555328 4554939 gene locus_tag Alide2_4351 4555328 4554939 CDS product 50S ribosomal protein L17 transl_table 11 protein_id gb|AEB86657.1||gnl|jgi|Alide2_4351 note TIGRFAM: Ribosomal protein L17~HAMAP: Ribosomal protein L17~KEGG: dia:Dtpsy_0399 50S ribosomal protein L17~PFAM: Ribosomal protein L17 inference protein motif:HAMAP:MF_01368 db_xref InterPro:IPR000456 4556412 4555417 gene locus_tag Alide2_4352 4556412 4555417 CDS product DNA-directed RNA polymerase, alpha subunit transl_table 11 protein_id gb|AEB86658.1||gnl|jgi|Alide2_4352 note TIGRFAM: DNA-directed RNA polymerase, alpha subunit~PFAM: RNA polymerase, alpha subunit, C-terminal; DNA-directed RNA polymerase, insert domain; DNA-directed RNA polymerase, dimerisation~KEGG: dia:Dtpsy_0398 DNA-directed RNA polymerase subunit alpha~SMART: DNA-directed RNA polymerase, RpoA/D/Rpb3-type inference protein motif:TFAM:TIGR02027 db_xref GO:0003677 db_xref GO:0003899 db_xref InterPro:IPR011260 db_xref InterPro:IPR011261 db_xref InterPro:IPR011262 db_xref InterPro:IPR011263 db_xref InterPro:IPR011773 4557199 4556525 gene locus_tag Alide2_4353 4557199 4556525 CDS product ribosomal protein S4 transl_table 11 protein_id gb|AEB86659.1||gnl|jgi|Alide2_4353 note TIGRFAM: Ribosomal protein S4, bacterial-type~PFAM: Ribosomal protein S4/S9, N-terminal; RNA-binding S4~KEGG: aav:Aave_0625 30S ribosomal protein S4~SMART: RNA-binding S4 inference protein motif:TFAM:TIGR01017 db_xref GO:0003735 db_xref InterPro:IPR001912 db_xref InterPro:IPR002942 db_xref InterPro:IPR005709 4557644 4557240 gene locus_tag Alide2_4354 4557644 4557240 CDS product 30S ribosomal protein S11 transl_table 11 protein_id gb|AEB86660.1||gnl|jgi|Alide2_4354 note KEGG: aav:Aave_0624 30S ribosomal protein S11~TIGRFAM: Ribosomal protein S11, bacterial-type~PFAM: Ribosomal protein S11 inference protein motif:TFAM:TIGR03632 db_xref GO:0003735 db_xref InterPro:IPR001971 db_xref InterPro:IPR019981 4558025 4557660 gene locus_tag Alide2_4355 4558025 4557660 CDS product 30S ribosomal protein S13 transl_table 11 protein_id gb|AEB86661.1||gnl|jgi|Alide2_4355 note KEGG: dia:Dtpsy_0395 30S ribosomal protein S13~TIGRFAM: Ribosomal protein S13, bacterial-type~PFAM: Ribosomal protein S13 inference protein motif:TFAM:TIGR03631 db_xref GO:0003723 db_xref GO:0003735 db_xref InterPro:IPR001892 db_xref InterPro:IPR019980 4558162 4558049 gene locus_tag Alide2_4356 4558162 4558049 CDS product 50S ribosomal protein L36 transl_table 11 protein_id gb|AEB86662.1||gnl|jgi|Alide2_4356 note TIGRFAM: Ribosomal protein L36~HAMAP: Ribosomal protein L36~KEGG: ctt:CtCNB1_4432 ribosomal protein L36~PFAM: Ribosomal protein L36 inference protein motif:HAMAP:MF_00251 db_xref InterPro:IPR000473 4559629 4558310 gene locus_tag Alide2_4357 4559629 4558310 CDS product preprotein translocase, SecY subunit transl_table 11 protein_id gb|AEB86663.1||gnl|jgi|Alide2_4357 note manually curated~TIGRFAM: SecY protein~KEGG: dia:Dtpsy_0393 preprotein translocase subunit SecY~PFAM: SecY protein inference protein motif:TFAM:TIGR00967 db_xref GO:0015450 db_xref InterPro:IPR002208 4560084 4559653 gene locus_tag Alide2_4358 4560084 4559653 CDS product ribosomal protein L15 transl_table 11 protein_id gb|AEB86664.1||gnl|jgi|Alide2_4358 note KEGG: ctt:CtCNB1_4434 ribosomal protein L15~TIGRFAM: Ribosomal protein L15, bacterial-type~PFAM: Ribosomal protein L18e/L15 inference protein motif:TFAM:TIGR01071 db_xref GO:0003735 db_xref InterPro:IPR005749 db_xref InterPro:IPR021131 4560277 4560095 gene locus_tag Alide2_4359 4560277 4560095 CDS product ribosomal protein L30 transl_table 11 protein_id gb|AEB86665.1||gnl|jgi|Alide2_4359 note KEGG: dia:Dtpsy_0391 50S ribosomal protein L30~TIGRFAM: Ribosomal protein L30, bacterial-type~PFAM: Ribosomal protein L30, ferredoxin-like fold domain inference protein motif:TFAM:TIGR01308 db_xref GO:0003735 db_xref InterPro:IPR005996 db_xref InterPro:IPR016082 4560811 4560290 gene locus_tag Alide2_4360 4560811 4560290 CDS product ribosomal protein S5 transl_table 11 protein_id gb|AEB86666.1||gnl|jgi|Alide2_4360 note KEGG: dia:Dtpsy_0390 30S ribosomal protein S5~TIGRFAM: Ribosomal protein S5, bacterial-type~PFAM: Ribosomal protein S5, C-terminal; Ribosomal protein S5, N-terminal inference protein motif:TFAM:TIGR01021 db_xref GO:0003735 db_xref InterPro:IPR005324 db_xref InterPro:IPR005712 db_xref InterPro:IPR013810 4561192 4560827 gene locus_tag Alide2_4361 4561192 4560827 CDS product ribosomal protein L18 transl_table 11 protein_id gb|AEB86667.1||gnl|jgi|Alide2_4361 note KEGG: dia:Dtpsy_0389 50S ribosomal protein L18~TIGRFAM: Ribosomal protein L18, bacterial~PFAM: Ribosomal protein L18/L5 inference protein motif:TFAM:TIGR00060 db_xref GO:0003735 db_xref InterPro:IPR004389 db_xref InterPro:IPR005484 4561737 4561204 gene locus_tag Alide2_4362 4561737 4561204 CDS product ribosomal protein L6 transl_table 11 protein_id gb|AEB86668.1||gnl|jgi|Alide2_4362 note KEGG: dia:Dtpsy_0388 50S ribosomal protein L6~TIGRFAM: Ribosomal protein L6, bacterial-type~PFAM: Ribosomal protein L6, alpha-beta domain inference protein motif:TFAM:TIGR03654 db_xref GO:0003735 db_xref GO:0019843 db_xref InterPro:IPR019906 db_xref InterPro:IPR020040 4562157 4561762 gene locus_tag Alide2_4363 4562157 4561762 CDS product ribosomal protein S8 transl_table 11 protein_id gb|AEB86669.1||gnl|jgi|Alide2_4363 note PFAM: Ribosomal protein S8~KEGG: aav:Aave_0615 30S ribosomal protein S8 inference protein motif:PFAM:PF00410 db_xref GO:0003735 db_xref InterPro:IPR000630 4562484 4562179 gene locus_tag Alide2_4364 4562484 4562179 CDS product 30S ribosomal protein S14 transl_table 11 protein_id gb|AEB86670.1||gnl|jgi|Alide2_4364 note KEGG: dia:Dtpsy_0386 30S ribosomal protein S14~HAMAP: Ribosomal protein S14, bacterial/plastid~PFAM: Ribosomal protein S14 inference protein motif:HAMAP:MF_00537 db_xref InterPro:IPR001209 db_xref InterPro:IPR023036 4563033 4562494 gene locus_tag Alide2_4365 4563033 4562494 CDS product ribosomal protein L5 transl_table 11 protein_id gb|AEB86671.1||gnl|jgi|Alide2_4365 note PFAM: Ribosomal protein L5~KEGG: dia:Dtpsy_0385 50S ribosomal protein L5 inference protein motif:PFAM:PF00281 db_xref GO:0003735 db_xref InterPro:IPR002132 4563363 4563043 gene locus_tag Alide2_4366 4563363 4563043 CDS product ribosomal protein L24 transl_table 11 protein_id gb|AEB86672.1||gnl|jgi|Alide2_4366 note TIGRFAM: Ribosomal protein L24~PFAM: KOW~KEGG: dia:Dtpsy_0384 50S ribosomal protein L24~SMART: KOW inference protein motif:TFAM:TIGR01079 db_xref GO:0003735 db_xref InterPro:IPR003256 db_xref InterPro:IPR005824 4563742 4563374 gene locus_tag Alide2_4367 4563742 4563374 CDS product ribosomal protein L14 transl_table 11 protein_id gb|AEB86673.1||gnl|jgi|Alide2_4367 note KEGG: dia:Dtpsy_0383 50S ribosomal protein L14~TIGRFAM: Ribosomal protein L14, bacterial-type~PFAM: Ribosomal protein L14b/L23e inference protein motif:TFAM:TIGR01067 db_xref GO:0003735 db_xref InterPro:IPR000218 db_xref InterPro:IPR005745 4565548 4563950 gene locus_tag Alide2_4368 4565548 4563950 CDS product Glycerol-3-phosphate dehydrogenase EC_number 1.1.5.3 transl_table 11 protein_id gb|AEB86674.1||gnl|jgi|Alide2_4368 note KEGG: aav:Aave_0610 FAD dependent oxidoreductase~PFAM: FAD dependent oxidoreductase inference protein motif:PRIAM:1.1.5.3 db_xref InterPro:IPR006076 4565671 4566432 gene locus_tag Alide2_4369 4565671 4566432 CDS product transcriptional regulator, DeoR family transl_table 11 protein_id gb|AEB86675.1||gnl|jgi|Alide2_4369 note KEGG: ajs:Ajs_0383 DeoR family transcriptional regulator~PFAM: HTH transcriptional regulator, DeoR; HTH transcriptional regulator, DeoR N-terminal~SMART: HTH transcriptional regulator, DeoR N-terminal inference protein motif:PFAM:PF00455 db_xref GO:0003700 db_xref InterPro:IPR001034 db_xref InterPro:IPR014036 4566454 4567959 gene locus_tag Alide2_4370 4566454 4567959 CDS product Glycerol kinase EC_number 2.7.1.30 transl_table 11 protein_id gb|AEB86676.1||gnl|jgi|Alide2_4370 note PFAM: Carbohydrate kinase, FGGY, N-terminal; Carbohydrate kinase, FGGY, C-terminal~TIGRFAM: Glycerol kinase~HAMAP: Glycerol kinase~KEGG: dia:Dtpsy_0373 glycerol kinase inference protein motif:HAMAP:MF_00186 db_xref InterPro:IPR005999 db_xref InterPro:IPR018484 db_xref InterPro:IPR018485 4568116 4568955 gene locus_tag Alide2_4371 4568116 4568955 CDS product pyrroline-5-carboxylate reductase EC_number 1.5.1.2 transl_table 11 protein_id gb|AEB86677.1||gnl|jgi|Alide2_4371 note TIGRFAM: Pyrroline-5-carboxylate reductase~KEGG: dia:Dtpsy_0372 pyrroline-5-carboxylate reductase~PFAM: NADP oxidoreductase, coenzyme F420-dependent inference protein motif:TFAM:TIGR00112 db_xref GO:0004735 db_xref InterPro:IPR000304 db_xref InterPro:IPR004455 4569055 4570830 gene locus_tag Alide2_4372 4569055 4570830 CDS product Spore coat protein CotH transl_table 11 protein_id gb|AEB86678.1||gnl|jgi|Alide2_4372 note PFAM: Spore coat protein CotH~KEGG: glo:Glov_2109 spore coat protein CotH inference protein motif:PFAM:PF08757 db_xref InterPro:IPR014867 4571709 4570837 gene locus_tag Alide2_4373 4571709 4570837 CDS product 4-hydroxybenzoate octaprenyltransferase transl_table 11 protein_id gb|AEB86679.1||gnl|jgi|Alide2_4373 note TIGRFAM: 4-hydroxybenzoate polyprenyl transferase~HAMAP: 4-hydroxybenzoate polyprenyl transferase~KEGG: dia:Dtpsy_0371 4-hydroxybenzoate polyprenyl transferase~PFAM: UbiA prenyltransferase inference protein motif:HAMAP:MF_01635 db_xref InterPro:IPR000537 db_xref InterPro:IPR006370 4572276 4574170 gene locus_tag Alide2_4374 pseudo 4574920 4574381 gene locus_tag Alide2_4375 4574920 4574381 CDS product Ferritin Dps family protein transl_table 11 protein_id gb|AEB86680.1||gnl|jgi|Alide2_4375 note PFAM: Ferritin/Dps protein~KEGG: dia:Dtpsy_0369 ferritin Dps family protein inference protein motif:PFAM:PF00210 db_xref GO:0008199 db_xref InterPro:IPR008331 4575985 4575020 gene locus_tag Alide2_4376 4575985 4575020 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB86681.1||gnl|jgi|Alide2_4376 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: dia:Dtpsy_0368 transcriptional regulator, LysR family inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 4578148 4576031 gene locus_tag Alide2_4377 4578148 4576031 CDS product ATP-dependent DNA helicase RecG transl_table 11 protein_id gb|AEB86682.1||gnl|jgi|Alide2_4377 note TIGRFAM: DNA helicase, ATP-dependent, RecG~PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; Helicase, C-terminal~KEGG: ajs:Ajs_0376 ATP-dependent DNA helicase RecG~SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal inference protein motif:TFAM:TIGR00643 db_xref GO:0004003 db_xref InterPro:IPR001650 db_xref InterPro:IPR004365 db_xref InterPro:IPR004609 db_xref InterPro:IPR011545 db_xref InterPro:IPR014001 4578325 4579590 gene locus_tag Alide2_4378 4578325 4579590 CDS product metal dependent phosphohydrolase transl_table 11 protein_id gb|AEB86683.1||gnl|jgi|Alide2_4378 note TIGRFAM: Uncharacterised protein family HDIG~PFAM: Metal-dependent phosphohydrolase, HD subdomain~KEGG: dia:Dtpsy_0366 metal dependent phosphohydrolase~SMART: Metal-dependent phosphohydrolase, HD domain inference protein motif:TFAM:TIGR00277 db_xref InterPro:IPR003607 db_xref InterPro:IPR006674 db_xref InterPro:IPR006675 4579679 4580782 gene locus_tag Alide2_4379 4579679 4580782 CDS product S-adenosylmethionine/tRNA-ribosyltransferase-isomerase transl_table 11 protein_id gb|AEB86684.1||gnl|jgi|Alide2_4379 note KEGG: dia:Dtpsy_0365 S-adenosylmethionine/tRNA-ribosyltransferase-isomerase~TIGRFAM: Queuosine biosynthesis protein~PFAM: Queuosine biosynthesis protein inference protein motif:TFAM:TIGR00113 db_xref GO:0016740 db_xref GO:0016853 db_xref InterPro:IPR003699 4580931 4581812 gene locus_tag Alide2_4380 4580931 4581812 CDS product protein of unknown function DUF6 transmembrane transl_table 11 protein_id gb|AEB86685.1||gnl|jgi|Alide2_4380 note PFAM: Drug/metabolite transporter~KEGG: ajs:Ajs_0373 hypothetical protein inference protein motif:PFAM:PF00892 db_xref InterPro:IPR000620 4583478 4581871 gene locus_tag Alide2_4381 4583478 4581871 CDS product Gamma-glutamyltransferase EC_number 2.3.2.2 transl_table 11 protein_id gb|AEB86686.1||gnl|jgi|Alide2_4381 note KEGG: ctt:CtCNB1_4698 gamma-glutamyltranspeptidase~PFAM: Gamma-glutamyltranspeptidase inference protein motif:PRIAM:2.3.2.2 db_xref InterPro:IPR000101 4584446 4583484 gene locus_tag Alide2_4382 4584446 4583484 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86687.1||gnl|jgi|Alide2_4382 note KEGG: vei:Veis_0179 hypothetical protein inference similar to AA sequence:KEGG:Veis_0179 db_xref InterPro:IPR005064 4584573 4585478 gene locus_tag Alide2_4383 4584573 4585478 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB86688.1||gnl|jgi|Alide2_4383 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: vei:Veis_0178 LysR family transcriptional regulator inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 4586203 4585487 gene locus_tag Alide2_4384 4586203 4585487 CDS product Uracil-DNA glycosylase transl_table 11 protein_id gb|AEB86689.1||gnl|jgi|Alide2_4384 note TIGRFAM: Uracil-DNA glycosylase~HAMAP: Uracil-DNA glycosylase~KEGG: dia:Dtpsy_0363 uracil-DNA glycosylase~PFAM: Uracil-DNA glycosylase-like inference protein motif:HAMAP:MF_00148 db_xref InterPro:IPR002043 db_xref InterPro:IPR005122 4587064 4586264 gene locus_tag Alide2_4385 4587064 4586264 CDS product Indole-3-glycerol-phosphate synthase EC_number 4.1.1.48 transl_table 11 protein_id gb|AEB86690.1||gnl|jgi|Alide2_4385 note KEGG: dia:Dtpsy_0361 indole-3-glycerol-phosphate synthase~PFAM: Indole-3-glycerol phosphate synthase inference protein motif:PRIAM:4.1.1.48 db_xref InterPro:IPR013798 4587223 4587071 gene locus_tag Alide2_4386 4587223 4587071 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86691.1||gnl|jgi|Alide2_4386 note KEGG: ctt:CtCNB1_4464 hypothetical protein inference similar to AA sequence:KEGG:CtCNB1_4464 4588254 4587220 gene locus_tag Alide2_4387 4588254 4587220 CDS product Anthranilate phosphoribosyltransferase EC_number 2.4.2.18 transl_table 11 protein_id gb|AEB86692.1||gnl|jgi|Alide2_4387 note PFAM: Glycosyl transferase, family 3; Glycosyl transferase, family 3, N-terminal~TIGRFAM: Anthranilate phosphoribosyl transferase~HAMAP: Anthranilate phosphoribosyl transferase~KEGG: dia:Dtpsy_0359 anthranilate phosphoribosyltransferase inference protein motif:HAMAP:MF_00211 db_xref InterPro:IPR000312 db_xref InterPro:IPR005940 db_xref InterPro:IPR017459 4588823 4588251 gene locus_tag Alide2_4388 4588823 4588251 CDS product glutamine amidotransferase of anthranilate synthase EC_number 4.1.3.27 transl_table 11 protein_id gb|AEB86693.1||gnl|jgi|Alide2_4388 note TIGRFAM: Anthranilate synthase, glutamine amidotransferase domain~KEGG: dia:Dtpsy_0358 anthranilate synthase component II~PFAM: Glutamine amidotransferase class-I, C-terminal inference protein motif:TFAM:TIGR00566 db_xref GO:0004049 db_xref InterPro:IPR000991 db_xref InterPro:IPR006221 4590535 4589621 gene locus_tag Alide2_4389 4590535 4589621 CDS product Integrase catalytic region transl_table 11 protein_id gb|AEB86694.1||gnl|jgi|Alide2_4389 note PFAM: Integrase, catalytic core~KEGG: rpf:Rpic12D_2820 integrase catalytic region inference protein motif:PFAM:PF00665 db_xref GO:0003677 db_xref InterPro:IPR001584 4590855 4590532 gene locus_tag Alide2_4390 4590855 4590532 CDS product transposase IS3/IS911 family protein transl_table 11 protein_id gb|AEB86695.1||gnl|jgi|Alide2_4390 note PFAM: Transposase IS3/IS911family~KEGG: ajs:Ajs_0906 transposase IS3/IS911 family protein inference protein motif:PFAM:PF01527 db_xref GO:0003677 db_xref GO:0004803 db_xref InterPro:IPR002514 4590986 4591186 gene locus_tag Alide2_4391 4590986 4591186 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86696.1||gnl|jgi|Alide2_4391 inference ab initio prediction:Prodigal:1.4 4591716 4591168 gene locus_tag Alide2_4392 4591716 4591168 CDS product RES domain protein transl_table 11 protein_id gb|AEB86697.1||gnl|jgi|Alide2_4392 note KEGG: avn:Avin_32410 hypothetical protein~PFAM: RES~SMART: RES inference protein motif:PFAM:PF08808 db_xref InterPro:IPR014914 4592084 4591713 gene locus_tag Alide2_4393 4592084 4591713 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86698.1||gnl|jgi|Alide2_4393 note KEGG: avn:Avin_32400 hypothetical protein inference similar to AA sequence:KEGG:Avin_32400 4592740 4592399 gene locus_tag Alide2_4394 4592740 4592399 CDS product Chorismate mutase, type II transl_table 11 protein_id gb|AEB86699.1||gnl|jgi|Alide2_4394 note KEGG: dia:Dtpsy_0357 chorismate mutase~PFAM: Chorismate mutase, type II~SMART: Chorismate mutase inference protein motif:PFAM:PF01817 db_xref InterPro:IPR002701 db_xref InterPro:IPR020822 4594236 4592737 gene locus_tag Alide2_4395 4594236 4592737 CDS product anthranilate synthase component I EC_number 4.1.3.27 transl_table 11 protein_id gb|AEB86700.1||gnl|jgi|Alide2_4395 note TIGRFAM: Anthranilate synthase component I, PabB-like~KEGG: dia:Dtpsy_0356 anthranilate synthase component I~PFAM: Chorismate binding, C-terminal; Anthranilate synthase component I, N-terminal inference protein motif:TFAM:TIGR00564 db_xref GO:0004049 db_xref InterPro:IPR005256 db_xref InterPro:IPR006805 db_xref InterPro:IPR015890 4594579 4596339 gene locus_tag Alide2_4396 4594579 4596339 CDS product methyl-accepting chemotaxis sensory transducer transl_table 11 protein_id gb|AEB86701.1||gnl|jgi|Alide2_4396 note KEGG: ajs:Ajs_0364 methyl-accepting chemotaxis sensory transducer~PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain~SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain inference protein motif:PFAM:PF00015 db_xref GO:0004871 db_xref InterPro:IPR003660 db_xref InterPro:IPR004089 4596502 4599267 gene locus_tag Alide2_4397 4596502 4599267 CDS product diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) transl_table 11 protein_id gb|AEB86702.1||gnl|jgi|Alide2_4397 note TIGRFAM: Diguanylate cyclase, predicted; PAS~PFAM: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS fold; HAMP linker domain~KEGG: slt:Slit_0879 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)~SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS; HAMP linker domain; PAC motif inference protein motif:TFAM:TIGR00254 db_xref GO:0004871 db_xref InterPro:IPR000014 db_xref InterPro:IPR000160 db_xref InterPro:IPR001610 db_xref InterPro:IPR001633 db_xref InterPro:IPR003660 db_xref InterPro:IPR013767 4599958 4599206 gene locus_tag Alide2_4398 4599958 4599206 CDS product phosphoglycolate phosphatase EC_number 3.1.3.18 transl_table 11 protein_id gb|AEB86703.1||gnl|jgi|Alide2_4398 note TIGRFAM: 2-phosphoglycolate phosphatase, prokaryotic; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1~KEGG: dia:Dtpsy_0352 phosphoglycolate phosphatase~PFAM: Haloacid dehalogenase-like hydrolase inference protein motif:TFAM:TIGR01449 db_xref GO:0008967 db_xref GO:0016787 db_xref InterPro:IPR005834 db_xref InterPro:IPR006346 db_xref InterPro:IPR006402 db_xref InterPro:IPR006439 4600147 4600521 gene locus_tag Alide2_4399 4600147 4600521 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86704.1||gnl|jgi|Alide2_4399 note KEGG: ajs:Ajs_0362 hypothetical protein inference similar to AA sequence:KEGG:Ajs_0362 4601218 4600538 gene locus_tag Alide2_4400 4601218 4600538 CDS product ribulose-phosphate 3-epimerase EC_number 5.1.3.1 transl_table 11 protein_id gb|AEB86705.1||gnl|jgi|Alide2_4400 note TIGRFAM: Ribulose-phosphate 3-epimerase~KEGG: dia:Dtpsy_0350 ribulose-phosphate 3-epimerase~PFAM: Ribulose-phosphate 3-epimerase inference protein motif:TFAM:TIGR01163 db_xref GO:0004750 db_xref InterPro:IPR000056 4601267 4601674 gene locus_tag Alide2_4401 4601267 4601674 CDS product Protein ApaG transl_table 11 protein_id gb|AEB86706.1||gnl|jgi|Alide2_4401 note KEGG: dia:Dtpsy_0349 ApaG~HAMAP: Uncharacterised protein family ApaG~PFAM: ApaG domain inference protein motif:HAMAP:MF_00791 db_xref InterPro:IPR007474 db_xref InterPro:IPR023065 4601671 4603659 gene locus_tag Alide2_4402 4601671 4603659 CDS product site-specific recombinase Gcr transl_table 11 protein_id gb|AEB86707.1||gnl|jgi|Alide2_4402 note PFAM: Site-specific recombinase Gcr~KEGG: ajs:Ajs_0359 putative site-specific recombinase transmembrane protein inference protein motif:PFAM:PF10136 db_xref InterPro:IPR011385 4603829 4605094 gene locus_tag Alide2_4403 4603829 4605094 CDS product sodium/hydrogen exchanger transl_table 11 protein_id gb|AEB86708.1||gnl|jgi|Alide2_4403 note PFAM: Cation/H+ exchanger~KEGG: dia:Dtpsy_0347 sodium/hydrogen exchanger inference protein motif:PFAM:PF00999 db_xref GO:0015299 db_xref InterPro:IPR006153 4605084 4606208 gene locus_tag Alide2_4404 4605084 4606208 CDS product Carboxylate-amine ligase ybdK transl_table 11 protein_id gb|AEB86709.1||gnl|jgi|Alide2_4404 note TIGRFAM: Carboxylate-amine ligase, predicted~HAMAP: Carboxylate-amine ligase, predicted~KEGG: dia:Dtpsy_0346 carboxylate-amine ligase~PFAM: Glutamate--cysteine ligase, GCS2 inference protein motif:HAMAP:MF_01609 db_xref InterPro:IPR006336 db_xref InterPro:IPR011793 4606211 4607197 gene locus_tag Alide2_4405 4606211 4607197 CDS product thiamine-monophosphate kinase EC_number 2.7.4.16 transl_table 11 protein_id gb|AEB86710.1||gnl|jgi|Alide2_4405 note TIGRFAM: Thiamine-monophosphate kinase~KEGG: xtr:100495996 thiamine-monophosphate kinase-like~PFAM: AIR synthase-related protein; AIR synthase-related protein, C-terminal inference protein motif:TFAM:TIGR01379 db_xref GO:0009030 db_xref InterPro:IPR000728 db_xref InterPro:IPR006283 db_xref InterPro:IPR010918 4607634 4607182 gene locus_tag Alide2_4406 4607634 4607182 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86711.1||gnl|jgi|Alide2_4406 note KEGG: rfr:Rfer_2221 hypothetical protein inference similar to AA sequence:KEGG:Rfer_2221 4607738 4608214 gene locus_tag Alide2_4407 4607738 4608214 CDS product putative type 4 fimbrial biogenesis transmembrane protein transl_table 11 protein_id gb|AEB86712.1||gnl|jgi|Alide2_4407 note KEGG: har:HEAR3117 putative type 4 fimbrial biogenesis transmembrane protein inference similar to AA sequence:KEGG:HEAR3117 db_xref InterPro:IPR012902 4608229 4608843 gene locus_tag Alide2_4408 4608229 4608843 CDS product Tfp pilus assembly protein FimT transl_table 11 protein_id gb|AEB86713.1||gnl|jgi|Alide2_4408 note KEGG: lch:Lcho_2905 Tfp pilus assembly protein FimT inference similar to AA sequence:KEGG:Lcho_2905 db_xref InterPro:IPR002416 db_xref InterPro:IPR012902 4608864 4609319 gene locus_tag Alide2_4409 4608864 4609319 CDS product type IV pilus modification protein PilV transl_table 11 protein_id gb|AEB86714.1||gnl|jgi|Alide2_4409 note TIGRFAM: Pilus modification type IV, PilV; Prepilin-type cleavage/methylation, N-terminal~KEGG: lch:Lcho_2906 hypothetical protein inference protein motif:TFAM:TIGR02523 db_xref InterPro:IPR012902 db_xref InterPro:IPR013362 4609316 4610401 gene locus_tag Alide2_4410 4609316 4610401 CDS product type IV pilus assembly protein PilW transl_table 11 protein_id gb|AEB86715.1||gnl|jgi|Alide2_4410 note KEGG: lch:Lcho_2907 type IV pilus assembly protein PilW inference similar to AA sequence:KEGG:Lcho_2907 4610386 4611066 gene locus_tag Alide2_4411 4610386 4611066 CDS product type IV pilus assembly protein PilX transl_table 11 protein_id gb|AEB86716.1||gnl|jgi|Alide2_4411 note KEGG: lch:Lcho_2908 type IV pilus assembly protein PilX inference similar to AA sequence:KEGG:Lcho_2908 4611144 4614704 gene locus_tag Alide2_4412 4611144 4614704 CDS product Pyrrolo-quinoline quinone repeat-containing protein transl_table 11 protein_id gb|AEB86717.1||gnl|jgi|Alide2_4412 note KEGG: mep:MPQ_2531 pyrrolo-quinoline quinone~PFAM: Pyrrolo-quinoline quinone repeat~SMART: Pyrrolo-quinoline quinone beta-propeller repeat inference protein motif:PFAM:PF01011 db_xref InterPro:IPR002372 db_xref InterPro:IPR018391 4615439 4614750 gene locus_tag Alide2_4413 4615439 4614750 CDS product regulatory protein TetR transl_table 11 protein_id gb|AEB86718.1||gnl|jgi|Alide2_4413 note PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal~KEGG: axy:AXYL_05659 TetR family regulatory protein 27 inference protein motif:PFAM:PF00440 db_xref GO:0003700 db_xref InterPro:IPR001647 4615598 4617340 gene locus_tag Alide2_4414 4615598 4617340 CDS product Poly-beta-hydroxybutyrate polymerase domain protein transl_table 11 protein_id gb|AEB86719.1||gnl|jgi|Alide2_4414 note PFAM: Poly-beta-hydroxybutyrate polymerase, N-terminal; Alpha/beta hydrolase fold-1~KEGG: eba:ebA5073 putative poly-beta-hydroxyalkanoate synthase inference protein motif:PFAM:PF07167 db_xref GO:0008415 db_xref InterPro:IPR000073 db_xref InterPro:IPR010941 4617337 4618110 gene locus_tag Alide2_4415 4617337 4618110 CDS product Enoyl-(acyl-carrier-protein) reductase (NADH) EC_number 1.3.1.9 transl_table 11 protein_id gb|AEB86720.1||gnl|jgi|Alide2_4415 note KEGG: aav:Aave_2051 enoyl-(acyl carrier protein) reductase~PFAM: Short-chain dehydrogenase/reductase SDR inference protein motif:PRIAM:1.3.1.9 db_xref InterPro:IPR002198 4618115 4619569 gene locus_tag Alide2_4416 4618115 4619569 CDS product RND efflux system, outer membrane lipoprotein, NodT family transl_table 11 protein_id gb|AEB86721.1||gnl|jgi|Alide2_4416 note KEGG: har:HEAR2593 putative outer membrane transport protein involved in copper (silver) tolerance (CusC)~TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT~PFAM: Outer membrane efflux protein inference protein motif:TFAM:TIGR01845 db_xref GO:0005215 db_xref GO:0008289 db_xref InterPro:IPR003423 db_xref InterPro:IPR010131 4619566 4620636 gene locus_tag Alide2_4417 4619566 4620636 CDS product secretion protein HlyD family protein transl_table 11 protein_id gb|AEB86722.1||gnl|jgi|Alide2_4417 note PFAM: Secretion protein HlyD~KEGG: axy:AXYL_05661 HlyD family secretion family protein 5 inference protein motif:PFAM:PF00529 db_xref GO:0008565 db_xref InterPro:IPR006143 4620633 4623371 gene locus_tag Alide2_4418 4620633 4623371 CDS product Monosaccharide-transporting ATPase EC_number 3.6.3.17 transl_table 11 protein_id gb|AEB86723.1||gnl|jgi|Alide2_4418 note PFAM: ABC transporter-like; ABC-2 type transporter~KEGG: ajs:Ajs_2361 ABC transporter related~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.17 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 db_xref InterPro:IPR013525 4623376 4624512 gene locus_tag Alide2_4419 4623376 4624512 CDS product ABC-2 type transporter transl_table 11 protein_id gb|AEB86724.1||gnl|jgi|Alide2_4419 note PFAM: ABC-2 type transporter~KEGG: bav:BAV1815 ABC transporter, permease protein inference protein motif:PFAM:PF01061 db_xref InterPro:IPR013525 4624590 4626029 gene locus_tag Alide2_4420 4624590 4626029 CDS product Phosphate acetyltransferase EC_number 2.3.1.8 transl_table 11 protein_id gb|AEB86725.1||gnl|jgi|Alide2_4420 note KEGG: rpf:Rpic12D_4426 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase~PFAM: Phosphate acetyl/butaryl transferase; MaoC-like dehydratase inference protein motif:PRIAM:2.3.1.8 db_xref InterPro:IPR002505 db_xref InterPro:IPR002539 4626026 4627216 gene locus_tag Alide2_4421 4626026 4627216 CDS product acetate kinase EC_number 2.7.2.1 transl_table 11 protein_id gb|AEB86726.1||gnl|jgi|Alide2_4421 note TIGRFAM: Acetate kinase~KEGG: har:HEAR1515 acetate kinase (acetokinase)~PFAM: Acetate/butyrate kinase inference protein motif:TFAM:TIGR00016 db_xref GO:0016301 db_xref InterPro:IPR000890 db_xref InterPro:IPR004372 4627294 4627821 gene locus_tag Alide2_4422 4627294 4627821 CDS product phosphatidylglycerophosphatase A transl_table 11 protein_id gb|AEB86727.1||gnl|jgi|Alide2_4422 note PFAM: Phosphatidylglycerophosphatase A~KEGG: dia:Dtpsy_0344 phosphatidylglycerophosphatase A inference protein motif:PFAM:PF04608 db_xref GO:0008962 db_xref InterPro:IPR007686 4627828 4628346 gene locus_tag Alide2_4423 4627828 4628346 CDS product CinA domain protein transl_table 11 protein_id gb|AEB86728.1||gnl|jgi|Alide2_4423 note KEGG: ajs:Ajs_0354 CinA domain-containing protein~TIGRFAM: CinA, C-terminal~PFAM: CinA, C-terminal inference protein motif:TFAM:TIGR00199 db_xref InterPro:IPR008136 4629987 4628359 gene locus_tag Alide2_4424 4629987 4628359 CDS product methyl-accepting chemotaxis sensory transducer transl_table 11 protein_id gb|AEB86729.1||gnl|jgi|Alide2_4424 note KEGG: lch:Lcho_3216 methyl-accepting chemotaxis sensory transducer~PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain~SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain inference protein motif:PFAM:PF00015 db_xref GO:0004871 db_xref InterPro:IPR003660 db_xref InterPro:IPR004089 4632230 4629990 gene locus_tag Alide2_4425 4632230 4629990 CDS product diguanylate cyclase/phosphodiesterase with extracellular sensor transl_table 11 protein_id gb|AEB86730.1||gnl|jgi|Alide2_4425 note TIGRFAM: Diguanylate cyclase, predicted~PFAM: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; HAMP linker domain~KEGG: slt:Slit_1460 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)~SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; HAMP linker domain inference protein motif:TFAM:TIGR00254 db_xref InterPro:IPR000160 db_xref InterPro:IPR001633 db_xref InterPro:IPR003660 4633113 4632508 gene locus_tag Alide2_4426 4633113 4632508 CDS product response regulator receiver and ANTAR domain protein transl_table 11 protein_id gb|AEB86731.1||gnl|jgi|Alide2_4426 note KEGG: nhl:Nhal_1312 response regulator receiver~PFAM: Signal transduction response regulator, receiver domain; ANTAR~SMART: Signal transduction response regulator, receiver domain inference protein motif:PFAM:PF00072 db_xref GO:0000156 db_xref InterPro:IPR001789 db_xref InterPro:IPR005561 4634546 4633110 gene locus_tag Alide2_4427 4634546 4633110 CDS product signal transduction histidine kinase transl_table 11 protein_id gb|AEB86732.1||gnl|jgi|Alide2_4427 note KEGG: lch:Lcho_2722 putative signal transduction histidine kinase~TIGRFAM: PAS~PFAM: Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain; PAS fold-4; ATPase-like, ATP-binding domain inference protein motif:TFAM:TIGR00229 db_xref GO:0004871 db_xref InterPro:IPR000014 db_xref InterPro:IPR003594 db_xref InterPro:IPR011495 db_xref InterPro:IPR013656 4635664 4634849 gene locus_tag Alide2_4428 4635664 4634849 CDS product SEC-C motif domain protein transl_table 11 protein_id gb|AEB86733.1||gnl|jgi|Alide2_4428 note PFAM: SEC-C motif~KEGG: dia:Dtpsy_0342 sec-C motif domain protein inference protein motif:PFAM:PF02810 db_xref InterPro:IPR004027 4635751 4636094 gene locus_tag Alide2_4429 pseudo 4636582 4636097 gene locus_tag Alide2_4430 4636582 4636097 CDS product protein of unknown function DUF132 transl_table 11 protein_id gb|AEB86734.1||gnl|jgi|Alide2_4430 note KEGG: dia:Dtpsy_0340 hypothetical protein~TIGRFAM: Protein of unknown function DUF132~SMART: Nucleotide binding protein, PINc inference protein motif:TFAM:TIGR00305 db_xref InterPro:IPR002850 db_xref InterPro:IPR006596 4637840 4636572 gene locus_tag Alide2_4431 4637840 4636572 CDS product rRNA (guanine-N(2)-)-methyltransferase EC_number 2.1.1.171 transl_table 11 protein_id gb|AEB86735.1||gnl|jgi|Alide2_4431 note PFAM: Putative RNA methylase; THUMP~KEGG: ajs:Ajs_0350 putative RNA methylase~SMART: THUMP inference protein motif:PRIAM:2.1.1.52 db_xref InterPro:IPR000241 db_xref InterPro:IPR004114 4637953 4639776 gene locus_tag Alide2_4432 4637953 4639776 CDS product methyl-accepting chemotaxis sensory transducer with Cache sensor transl_table 11 protein_id gb|AEB86736.1||gnl|jgi|Alide2_4432 note KEGG: aav:Aave_0421 methyl-accepting chemotaxis sensory transducer~PFAM: Chemotaxis methyl-accepting receptor, signalling; Cache; HAMP linker domain~SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain inference protein motif:PFAM:PF00015 db_xref GO:0004871 db_xref InterPro:IPR003660 db_xref InterPro:IPR004010 db_xref InterPro:IPR004089 4640221 4639778 gene locus_tag Alide2_4433 4640221 4639778 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86737.1||gnl|jgi|Alide2_4433 note KEGG: ajs:Ajs_0349 hypothetical protein inference similar to AA sequence:KEGG:Ajs_0349 4641788 4640235 gene locus_tag Alide2_4434 4641788 4640235 CDS product RNA polymerase, sigma 54 subunit, RpoN transl_table 11 protein_id gb|AEB86738.1||gnl|jgi|Alide2_4434 note KEGG: dia:Dtpsy_0337 RNA polymerase, sigma 54 subunit, RpoN~TIGRFAM: RNA polymerase sigma factor 54~PFAM: RNA polymerase sigma factor 54, DNA-binding; RNA polymerase sigma factor 54, core-binding; RNA polymerase sigma factor 54 inference protein motif:TFAM:TIGR02395 db_xref GO:0003677 db_xref GO:0003700 db_xref GO:0003899 db_xref GO:0016987 db_xref InterPro:IPR000394 db_xref InterPro:IPR007046 db_xref InterPro:IPR007634 4642638 4641838 gene locus_tag Alide2_4435 4642638 4641838 CDS product Sulfate-transporting ATPase EC_number 3.6.3.25 transl_table 11 protein_id gb|AEB86739.1||gnl|jgi|Alide2_4435 note PFAM: ABC transporter-like~KEGG: aav:Aave_0418 ABC transporter-related protein~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.25 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 4643279 4642635 gene locus_tag Alide2_4436 4643279 4642635 CDS product lipopolysaccharide transport periplasmic protein LptA transl_table 11 protein_id gb|AEB86740.1||gnl|jgi|Alide2_4436 note KEGG: dia:Dtpsy_0335 lipopolysaccharide transport periplasmic protein LptA~TIGRFAM: Lipopolysccharide assembly, LptA~PFAM: Organic solvent tolerance-like, N-terminal inference protein motif:TFAM:TIGR03002 db_xref GO:0001530 db_xref InterPro:IPR005653 db_xref InterPro:IPR014340 4644055 4643399 gene locus_tag Alide2_4437 4644055 4643399 CDS product DSBA oxidoreductase transl_table 11 protein_id gb|AEB86741.1||gnl|jgi|Alide2_4437 note PFAM: DSBA-like thioredoxin domain~KEGG: dia:Dtpsy_0334 DsbA oxidoreductase inference protein motif:PFAM:PF01323 db_xref GO:0015035 db_xref InterPro:IPR001853 4644770 4644135 gene locus_tag Alide2_4438 4644770 4644135 CDS product Sporulation domain-containing protein transl_table 11 protein_id gb|AEB86742.1||gnl|jgi|Alide2_4438 note PFAM: Sporulation-related domain~KEGG: dia:Dtpsy_0333 sporulation domain protein inference protein motif:PFAM:PF05036 db_xref InterPro:IPR007730 4646486 4644783 gene locus_tag Alide2_4439 4646486 4644783 CDS product arginyl-tRNA synthetase EC_number 6.1.1.19 transl_table 11 protein_id gb|AEB86743.1||gnl|jgi|Alide2_4439 note TIGRFAM: Arginyl-tRNA synthetase, class Ic~KEGG: ajs:Ajs_0343 arginyl-tRNA synthetase inference protein motif:TFAM:TIGR00456 db_xref GO:0004814 db_xref GO:0005524 db_xref InterPro:IPR001278 db_xref InterPro:IPR005148 db_xref InterPro:IPR008909 db_xref InterPro:IPR015945 4646611 4646937 gene locus_tag Alide2_4440 4646611 4646937 CDS product PsiF repeat-containing protein transl_table 11 protein_id gb|AEB86744.1||gnl|jgi|Alide2_4440 note PFAM: Phosphate-starvation-induced PsiF repeat~KEGG: dia:Dtpsy_0331 PsiF repeat protein inference protein motif:PFAM:PF07769 db_xref InterPro:IPR011690 4647450 4646995 gene locus_tag Alide2_4441 4647450 4646995 CDS product Protein of unknown function DUF2214, membrane transl_table 11 protein_id gb|AEB86745.1||gnl|jgi|Alide2_4441 note PFAM: Protein of unknown function DUF2214, membrane~KEGG: ajs:Ajs_0341 putative transmembrane protein inference protein motif:PFAM:PF09980 db_xref InterPro:IPR018706 4648881 4647544 gene locus_tag Alide2_4442 4648881 4647544 CDS product C4-dicarboxylate transport protein transl_table 11 protein_id gb|AEB86746.1||gnl|jgi|Alide2_4442 note KEGG: dac:Daci_2923 sodium:dicarboxylate symporter~HAMAP: C4-dicarboxylate transport protein~PFAM: Sodium:dicarboxylate symporter inference protein motif:HAMAP:MF_01300 db_xref InterPro:IPR001991 4649081 4651741 gene locus_tag Alide2_4443 4649081 4651741 CDS product PAS/PAC sensor hybrid histidine kinase transl_table 11 protein_id gb|AEB86747.1||gnl|jgi|Alide2_4443 note KEGG: dac:Daci_2922 PAS/PAC sensor hybrid histidine kinase~PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS fold-4; Signal transduction response regulator, receiver domain~SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Signal transduction response regulator, receiver domain inference protein motif:PFAM:PF02518 db_xref GO:0000155 db_xref GO:0000156 db_xref GO:0005524 db_xref InterPro:IPR001789 db_xref InterPro:IPR003594 db_xref InterPro:IPR003661 db_xref InterPro:IPR013656 4652445 4651807 gene locus_tag Alide2_4444 4652445 4651807 CDS product two component transcriptional regulator, LuxR family transl_table 11 protein_id gb|AEB86748.1||gnl|jgi|Alide2_4444 note KEGG: dac:Daci_2921 two component LuxR family transcriptional regulator~PFAM: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain~SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain inference protein motif:PFAM:PF00196 db_xref GO:0000156 db_xref GO:0003700 db_xref GO:0043565 db_xref InterPro:IPR000792 db_xref InterPro:IPR001789 4653391 4652459 gene locus_tag Alide2_4445 4653391 4652459 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB86749.1||gnl|jgi|Alide2_4445 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: dia:Dtpsy_0328 transcriptional regulator, LysR family inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 4653626 4655824 gene locus_tag Alide2_4446 4653626 4655824 CDS product malate synthase G EC_number 2.3.3.9 transl_table 11 protein_id gb|AEB86750.1||gnl|jgi|Alide2_4446 note TIGRFAM: Malate synthase G~KEGG: dia:Dtpsy_0327 malate synthase G~PFAM: Malate synthase inference protein motif:TFAM:TIGR01345 db_xref GO:0004474 db_xref InterPro:IPR001465 db_xref InterPro:IPR006253 4655901 4656185 gene locus_tag Alide2_4447 4655901 4656185 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86751.1||gnl|jgi|Alide2_4447 note manually curated~KEGG: ajs:Ajs_0337 hypothetical protein inference similar to AA sequence:KEGG:Ajs_0337 4656161 4656349 gene locus_tag Alide2_4448 4656161 4656349 CDS product 4-oxalocrotonate tautomerase family enzyme transl_table 11 protein_id gb|AEB86752.1||gnl|jgi|Alide2_4448 note KEGG: dia:Dtpsy_0325 4-oxalocrotonate tautomerase~TIGRFAM: 4-oxalocrotonate tautomerase, bacteria/archaea~PFAM: 4-oxalocrotonate tautomerase inference protein motif:TFAM:TIGR00013 db_xref GO:0016853 db_xref InterPro:IPR004370 db_xref InterPro:IPR018191 4656372 4657160 gene locus_tag Alide2_4449 4656372 4657160 CDS product protein of unknown function DUF169 transl_table 11 protein_id gb|AEB86753.1||gnl|jgi|Alide2_4449 note PFAM: Protein of unknown function DUF169~KEGG: bbt:BBta_4610 hypothetical protein inference protein motif:PFAM:PF02596 db_xref InterPro:IPR003748 4657185 4657952 gene locus_tag Alide2_4450 4657185 4657952 CDS product glutamine amidotransferase class-II transl_table 11 protein_id gb|AEB86754.1||gnl|jgi|Alide2_4450 note PFAM: Glutamine amidotransferase, class-II~KEGG: ajs:Ajs_0335 glutamine amidotransferase, class-II inference protein motif:PFAM:PF00310 db_xref InterPro:IPR000583 4658165 4658053 gene locus_tag Alide2_R0063 4658165 4658053 rRNA product 5S ribosomal RNA note 5S ribosomal RNA as predicted by Rfam (RF00001), score 84.63 4661158 4658282 gene locus_tag Alide2_R0064 4661158 4658282 rRNA product 23S ribosomal RNA note RNAmmer 1.2, Lagesen et al, Nucleic Acids Res. Apr 22, 2007 4661595 4661520 gene locus_tag Alide2_R0065 note tRNA-Ala3 4661595 4661520 tRNA product tRNA-Ala 4661702 4661626 gene locus_tag Alide2_R0066 note tRNA-Ile2 4661702 4661626 tRNA product tRNA-Ile 4663323 4661807 gene locus_tag Alide2_R0067 4663323 4661807 rRNA product 16S ribosomal RNA note RNAmmer 1.2, Lagesen et al, Nucleic Acids Res. Apr 22, 2007 4664810 4663791 gene locus_tag Alide2_4451 4664810 4663791 CDS product glutathione synthetase EC_number 6.3.2.3 transl_table 11 protein_id gb|AEB86755.1||gnl|jgi|Alide2_4451 note TIGRFAM: Glutathione synthetase, prokaryotic~KEGG: dia:Dtpsy_3256 glutathione synthetase~PFAM: Prokaryotic glutathione synthetase, ATP-binding; Prokaryotic glutathione synthetase, N-terminal inference protein motif:TFAM:TIGR01380 db_xref GO:0004363 db_xref InterPro:IPR004215 db_xref InterPro:IPR004218 db_xref InterPro:IPR006284 4666011 4664770 gene locus_tag Alide2_4452 4666011 4664770 CDS product benzoate transporter transl_table 11 protein_id gb|AEB86756.1||gnl|jgi|Alide2_4452 note KEGG: dia:Dtpsy_3257 benzoate transporter~TIGRFAM: Benzoate membrane transport protein~PFAM: Benzoate membrane transport protein inference protein motif:TFAM:TIGR00843 db_xref InterPro:IPR004711 4667974 4666103 gene locus_tag Alide2_4453 4667974 4666103 CDS product Low affinity potassium transport system protein kup transl_table 11 protein_id gb|AEB86757.1||gnl|jgi|Alide2_4453 note KEGG: aav:Aave_4541 K+ potassium transporter~HAMAP: Potassium uptake protein, low affinity, Kup~PFAM: K+ potassium transporter inference protein motif:HAMAP:MF_01522 db_xref InterPro:IPR003855 db_xref InterPro:IPR023051 4669413 4668070 gene locus_tag Alide2_4454 4669413 4668070 CDS product glutamate/cysteine ligase transl_table 11 protein_id gb|AEB86758.1||gnl|jgi|Alide2_4454 note KEGG: dia:Dtpsy_3259 glutamate/cysteine ligase~TIGRFAM: Glutamate--cysteine ligase GshA~PFAM: Glutamate--cysteine ligase GshA inference protein motif:TFAM:TIGR02049 db_xref InterPro:IPR011718 4670899 4669433 gene locus_tag Alide2_4455 4670899 4669433 CDS product cation transporter transl_table 11 protein_id gb|AEB86759.1||gnl|jgi|Alide2_4455 note PFAM: Cation transporter~KEGG: dac:Daci_5998 cation transporter inference protein motif:PFAM:PF02386 db_xref GO:0008324 db_xref InterPro:IPR003445 4672376 4670901 gene locus_tag Alide2_4456 4672376 4670901 CDS product TrkA-N domain protein transl_table 11 protein_id gb|AEB86760.1||gnl|jgi|Alide2_4456 note PFAM: Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal~KEGG: dia:Dtpsy_3261 potassium transporter peripheral membrane component inference protein motif:PFAM:PF02254 db_xref GO:0008324 db_xref InterPro:IPR003148 db_xref InterPro:IPR006037 4673771 4672437 gene locus_tag Alide2_4457 4673771 4672437 CDS product Gamma-glutamyl phosphate reductase EC_number 1.2.1.41 transl_table 11 protein_id gb|AEB86761.1||gnl|jgi|Alide2_4457 note PFAM: Aldehyde dehydrogenase domain~TIGRFAM: Gamma-glutamyl phosphate reductase GPR~HAMAP: Glutamate-5-semialdehyde dehydrogenase~KEGG: ajs:Ajs_3913 gamma-glutamyl phosphate reductase inference protein motif:HAMAP:MF_00412 db_xref InterPro:IPR000965 db_xref InterPro:IPR012134 db_xref InterPro:IPR015590 4674124 4673789 gene locus_tag Alide2_4458 4674124 4673789 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86762.1||gnl|jgi|Alide2_4458 inference ab initio prediction:Prodigal:1.4 4675127 4674066 gene locus_tag Alide2_4459 4675127 4674066 CDS product RimK domain protein ATP-grasp transl_table 11 protein_id gb|AEB86763.1||gnl|jgi|Alide2_4459 note KEGG: ank:AnaeK_1753 RimK domain protein ATP-grasp inference similar to AA sequence:KEGG:AnaeK_1753 4676431 4675124 gene locus_tag Alide2_4460 4676431 4675124 CDS product Astacin EC_number 3.4.24.21 transl_table 11 protein_id gb|AEB86764.1||gnl|jgi|Alide2_4460 note PFAM: Peptidase M12A, astacin~KEGG: cph:Cpha266_0056 peptidase M12A, astacin~SMART: Peptidase, metallopeptidase inference protein motif:PRIAM:3.4.24.21 db_xref InterPro:IPR001506 db_xref InterPro:IPR006026 4676744 4677028 gene locus_tag Alide2_4461 4676744 4677028 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86765.1||gnl|jgi|Alide2_4461 note KEGG: dia:Dtpsy_3263 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_3263 4678309 4677230 gene locus_tag Alide2_4462 4678309 4677230 CDS product DNA polymerase III, delta subunit transl_table 11 protein_id gb|AEB86766.1||gnl|jgi|Alide2_4462 note KEGG: dia:Dtpsy_3264 DNA polymerase III subunit delta~TIGRFAM: DNA polymerase III, delta subunit~PFAM: DNA polymerase III, delta inference protein motif:TFAM:TIGR01128 db_xref GO:0003677 db_xref InterPro:IPR005790 db_xref InterPro:IPR010372 4678842 4678330 gene locus_tag Alide2_4463 4678842 4678330 CDS product Rare lipoprotein B transl_table 11 protein_id gb|AEB86767.1||gnl|jgi|Alide2_4463 note PFAM: Lipopolysccharide assembly, LptE~KEGG: dia:Dtpsy_3265 rare lipoprotein B inference protein motif:PFAM:PF04390 db_xref InterPro:IPR007485 4681547 4678842 gene locus_tag Alide2_4464 4681547 4678842 CDS product leucyl-tRNA synthetase EC_number 6.1.1.4 transl_table 11 protein_id gb|AEB86768.1||gnl|jgi|Alide2_4464 note TIGRFAM: Leucyl-tRNA synthetase, class Ia, bacterial/mitochondrial~KEGG: ajs:Ajs_3917 leucyl-tRNA synthetase inference protein motif:TFAM:TIGR00396 db_xref GO:0000166 db_xref GO:0004823 db_xref GO:0005524 db_xref InterPro:IPR002302 db_xref InterPro:IPR013155 db_xref InterPro:IPR015413 4681704 4682948 gene locus_tag Alide2_4465 4681704 4682948 CDS product MscS Mechanosensitive ion channel transl_table 11 protein_id gb|AEB86769.1||gnl|jgi|Alide2_4465 note PFAM: Mechanosensitive ion channel MscS~KEGG: ajs:Ajs_3919 MscS mechanosensitive ion channel inference protein motif:PFAM:PF00924 db_xref InterPro:IPR006685 4683253 4684779 gene locus_tag Alide2_4466 4683253 4684779 CDS product Aldehyde Dehydrogenase transl_table 11 protein_id gb|AEB86770.1||gnl|jgi|Alide2_4466 note PFAM: Aldehyde dehydrogenase domain~KEGG: bmj:BMULJ_03133 NAD-dependent aldehyde dehydrogenase inference protein motif:PFAM:PF00171 db_xref GO:0016491 db_xref InterPro:IPR015590 4684862 4685672 gene locus_tag Alide2_4467 pseudo 4687666 4685693 gene locus_tag Alide2_4468 4687666 4685693 CDS product GAF modulated sigma54 specific transcriptional regulator, Fis family transl_table 11 protein_id gb|AEB86771.1||gnl|jgi|Alide2_4468 note KEGG: pna:Pnap_0735 fis family GAF modulated sigma54 specific transcriptional regulator~PFAM: RNA polymerase sigma factor 54, interaction; GAF; Helix-turn-helix, Fis-type~SMART: ATPase, AAA+ type, core inference protein motif:PFAM:PF00158 db_xref GO:0003700 db_xref GO:0005524 db_xref GO:0008134 db_xref InterPro:IPR002078 db_xref InterPro:IPR002197 db_xref InterPro:IPR003018 db_xref InterPro:IPR003593 4688034 4688516 gene locus_tag Alide2_4469 4688034 4688516 CDS product cytochrome c class I transl_table 11 protein_id gb|AEB86772.1||gnl|jgi|Alide2_4469 note PFAM: Cytochrome c, class I~KEGG: pna:Pnap_0736 cytochrome c-type protein inference protein motif:PFAM:PF00034 db_xref GO:0005506 db_xref GO:0009055 db_xref GO:0020037 db_xref InterPro:IPR003088 4688931 4691507 gene locus_tag Alide2_4470 4688931 4691507 CDS product diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) transl_table 11 protein_id gb|AEB86773.1||gnl|jgi|Alide2_4470 note TIGRFAM: Diguanylate cyclase, predicted; PAS~PFAM: Diguanylate cyclase, predicted; PAS fold; GAF; Diguanylate phosphodiesterase, EAL domain~KEGG: bxe:Bxe_C0015 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)~SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS; PAC motif; GAF inference protein motif:TFAM:TIGR00254 db_xref GO:0004871 db_xref InterPro:IPR000014 db_xref InterPro:IPR000160 db_xref InterPro:IPR001610 db_xref InterPro:IPR001633 db_xref InterPro:IPR003018 db_xref InterPro:IPR013767 4691933 4691514 gene locus_tag Alide2_4471 4691933 4691514 CDS product Biopolymer transport protein ExbD/TolR transl_table 11 protein_id gb|AEB86774.1||gnl|jgi|Alide2_4471 note PFAM: Biopolymer transport protein ExbD/TolR~KEGG: ajs:Ajs_3920 biopolymer transport protein ExbD/TolR inference protein motif:PFAM:PF02472 db_xref GO:0005215 db_xref InterPro:IPR003400 4692593 4691940 gene locus_tag Alide2_4472 4692593 4691940 CDS product MotA/TolQ/ExbB proton channel transl_table 11 protein_id gb|AEB86775.1||gnl|jgi|Alide2_4472 note PFAM: MotA/TolQ/ExbB proton channel~KEGG: dia:Dtpsy_3269 MotA/TolQ/ExbB proton channel inference protein motif:PFAM:PF01618 db_xref GO:0008565 db_xref InterPro:IPR002898 4693422 4692601 gene locus_tag Alide2_4473 4693422 4692601 CDS product dihydrodipicolinate reductase EC_number 1.3.1.26 transl_table 11 protein_id gb|AEB86776.1||gnl|jgi|Alide2_4473 note TIGRFAM: Dihydrodipicolinate reductase, bacterial/plant~KEGG: ajs:Ajs_3922 dihydrodipicolinate reductase~PFAM: Dihydrodipicolinate reductase, C-terminal; Dihydrodipicolinate reductase, N-terminal inference protein motif:TFAM:TIGR00036 db_xref GO:0008839 db_xref InterPro:IPR000846 db_xref InterPro:IPR011770 db_xref InterPro:IPR022663 4694019 4693477 gene locus_tag Alide2_4474 4694019 4693477 CDS product SmpA/OmlA domain-containing protein transl_table 11 protein_id gb|AEB86777.1||gnl|jgi|Alide2_4474 note PFAM: Lipoprotein SmpA/OmlA~KEGG: dia:Dtpsy_3271 SmpA/OmlA domain protein inference protein motif:PFAM:PF04355 db_xref InterPro:IPR007450 4694131 4694550 gene locus_tag Alide2_4475 4694131 4694550 CDS product ferric uptake regulator, Fur family transl_table 11 protein_id gb|AEB86778.1||gnl|jgi|Alide2_4475 note PFAM: Ferric-uptake regulator~KEGG: dia:Dtpsy_3272 ferric uptake regulator, Fur family inference protein motif:PFAM:PF01475 db_xref GO:0003700 db_xref InterPro:IPR002481 4695511 4694558 gene locus_tag Alide2_4476 4695511 4694558 CDS product HPr kinase transl_table 11 protein_id gb|AEB86779.1||gnl|jgi|Alide2_4476 note PFAM: Signal transduction serine kinase/phosphorylase, HPr(Ser) kinase, C-terminal; Signal transduction serine kinase/phosphorylase, HPr(Ser) kinase, N-terminal~KEGG: dia:Dtpsy_3273 HPr kinase/phosphorylase inference protein motif:PFAM:PF07475 db_xref GO:0000155 db_xref GO:0004672 db_xref GO:0005524 db_xref InterPro:IPR011104 db_xref InterPro:IPR011126 4696272 4695805 gene locus_tag Alide2_4477 4696272 4695805 CDS product putative PTS IIA-like nitrogen-regulatory protein PtsN transl_table 11 protein_id gb|AEB86780.1||gnl|jgi|Alide2_4477 note PFAM: Phosphotransferase system, phosphoenolpyruvate-dependent sugar EIIA 2~KEGG: ajs:Ajs_3926 PTS IIA-like nitrogen-regulatory protein PtsN inference protein motif:PFAM:PF00359 db_xref GO:0005351 db_xref InterPro:IPR002178 4696760 4696413 gene locus_tag Alide2_4478 4696760 4696413 CDS product sigma 54 modulation protein/ribosomal protein S30EA transl_table 11 protein_id gb|AEB86781.1||gnl|jgi|Alide2_4478 note KEGG: dia:Dtpsy_3275 sigma 54 modulation protein/ribosomal protein S30EA~TIGRFAM: Ribosomal protein S30Ae/sigma 54 modulation protein~PFAM: Ribosomal protein S30Ae/sigma 54 modulation protein inference protein motif:TFAM:TIGR00741 db_xref GO:0005488 db_xref InterPro:IPR003489 4697073 4697993 gene locus_tag Alide2_4479 4697073 4697993 CDS product phosphoribosylaminoimidazole-succinocarboxamide synthase EC_number 6.3.2.6 transl_table 11 protein_id gb|AEB86782.1||gnl|jgi|Alide2_4479 note TIGRFAM: SAICAR synthetase~KEGG: dia:Dtpsy_3276 phosphoribosylaminoimidazole-succinocarboxamide synthase~PFAM: SAICAR synthetase inference protein motif:TFAM:TIGR00081 db_xref GO:0004639 db_xref InterPro:IPR001636 4698951 4698043 gene locus_tag Alide2_4480 4698951 4698043 CDS product thioredoxin transl_table 11 protein_id gb|AEB86783.1||gnl|jgi|Alide2_4480 note KEGG: dia:Dtpsy_3279 thioredoxin~TIGRFAM: Thioredoxin~PFAM: Thioredoxin domain inference protein motif:TFAM:TIGR01068 db_xref GO:0009055 db_xref GO:0015035 db_xref InterPro:IPR005746 db_xref InterPro:IPR013766 4699093 4699590 gene locus_tag Alide2_4481 4699093 4699590 CDS product phosphoribosylaminoimidazole carboxylase, catalytic subunit EC_number 4.1.1.21 transl_table 11 protein_id gb|AEB86784.1||gnl|jgi|Alide2_4481 note TIGRFAM: Phosphoribosylaminoimidazole carboxylase, core~KEGG: dia:Dtpsy_3282 phosphoribosylaminoimidazole carboxylase, catalytic subunit~PFAM: Phosphoribosylaminoimidazole carboxylase, core inference protein motif:TFAM:TIGR01162 db_xref GO:0004638 db_xref InterPro:IPR000031 4699587 4700756 gene locus_tag Alide2_4482 4699587 4700756 CDS product phosphoribosylaminoimidazole carboxylase, ATPase subunit EC_number 4.1.1.21 transl_table 11 protein_id gb|AEB86785.1||gnl|jgi|Alide2_4482 note TIGRFAM: Phosphoribosylaminoimidazole carboxylase, ATPase subunit~KEGG: dia:Dtpsy_3283 phosphoribosylaminoimidazole carboxylase ATPase subunit~PFAM: ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type inference protein motif:TFAM:TIGR01161 db_xref GO:0004638 db_xref InterPro:IPR003135 db_xref InterPro:IPR005875 4700762 4701760 gene locus_tag Alide2_4483 4700762 4701760 CDS product Sua5/YciO/YrdC/YwlC family protein transl_table 11 protein_id gb|AEB86786.1||gnl|jgi|Alide2_4483 note KEGG: ajs:Ajs_3936 translation factor SUA5~TIGRFAM: Sua5/YciO/YrdC/YwlC~PFAM: Sua5/YciO/YrdC, N-terminal; SUA5 inference protein motif:TFAM:TIGR00057 db_xref InterPro:IPR004388 db_xref InterPro:IPR005145 db_xref InterPro:IPR006070 4701824 4702780 gene locus_tag Alide2_4484 4701824 4702780 CDS product lipolytic protein G-D-S-L family transl_table 11 protein_id gb|AEB86787.1||gnl|jgi|Alide2_4484 note PFAM: Lipase, GDSL~KEGG: ajs:Ajs_3937 lipase inference protein motif:PFAM:PF00657 db_xref GO:0004638 db_xref InterPro:IPR001087 db_xref InterPro:IPR006311 4703544 4702849 gene locus_tag Alide2_4485 4703544 4702849 CDS product OmpW family protein transl_table 11 protein_id gb|AEB86788.1||gnl|jgi|Alide2_4485 note PFAM: Outer membrane protein, OmpW~KEGG: pna:Pnap_1827 OmpW family protein inference protein motif:PFAM:PF03922 db_xref InterPro:IPR005618 4705132 4703573 gene locus_tag Alide2_4486 4705132 4703573 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86789.1||gnl|jgi|Alide2_4486 note KEGG: pna:Pnap_1828 hypothetical protein inference similar to AA sequence:KEGG:Pnap_1828 4706707 4705235 gene locus_tag Alide2_4487 4706707 4705235 CDS product D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase EC_number 3.4.16.4 transl_table 11 protein_id gb|AEB86790.1||gnl|jgi|Alide2_4487 note TIGRFAM: Peptidase S13, D-Ala-D-Ala carboxypeptidase C~KEGG: dia:Dtpsy_3288 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase~PFAM: Peptidase S13, D-Ala-D-Ala carboxypeptidase C inference protein motif:TFAM:TIGR00666 db_xref GO:0004185 db_xref InterPro:IPR000667 4706783 4707511 gene locus_tag Alide2_4488 4706783 4707511 CDS product universal protein YeaZ transl_table 11 protein_id gb|AEB86791.1||gnl|jgi|Alide2_4488 note KEGG: ajs:Ajs_3940 peptidase M22, glycoprotease~TIGRFAM: Conserved hypothetical protein CHP03725, YeaZ~PFAM: Peptidase M22, glycoprotease inference protein motif:TFAM:TIGR03725 db_xref InterPro:IPR000905 db_xref InterPro:IPR022496 4707508 4707984 gene locus_tag Alide2_4489 4707508 4707984 CDS product ribosomal-protein-alanine acetyltransferase transl_table 11 protein_id gb|AEB86792.1||gnl|jgi|Alide2_4489 note KEGG: dia:Dtpsy_3290 ribosomal-protein-alanine acetyltransferase~TIGRFAM: Ribosomal-protein-alanine acetyltransferase~PFAM: GCN5-related N-acetyltransferase (GNAT) domain inference protein motif:TFAM:TIGR01575 db_xref GO:0016407 db_xref InterPro:IPR000182 db_xref InterPro:IPR006464 4707981 4708718 gene locus_tag Alide2_4490 4707981 4708718 CDS product phage SPO1 DNA polymerase-related protein transl_table 11 protein_id gb|AEB86793.1||gnl|jgi|Alide2_4490 note KEGG: dia:Dtpsy_3291 phage SPO1 DNA polymerase-related protein inference similar to AA sequence:KEGG:Dtpsy_3291 4708889 4709875 gene locus_tag Alide2_4491 4708889 4709875 CDS product magnesium and cobalt transport protein CorA transl_table 11 protein_id gb|AEB86794.1||gnl|jgi|Alide2_4491 note KEGG: dac:Daci_0973 magnesium and cobalt transport protein CorA~TIGRFAM: Magnesium/cobalt transport protein CorA~PFAM: Mg2+ transporter protein, CorA-like inference protein motif:TFAM:TIGR00383 db_xref GO:0015087 db_xref GO:0015095 db_xref InterPro:IPR002523 db_xref InterPro:IPR004488 4710170 4710379 gene locus_tag Alide2_4492 4710170 4710379 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86795.1||gnl|jgi|Alide2_4492 inference ab initio prediction:Prodigal:1.4 4710679 4710861 gene locus_tag Alide2_4493 4710679 4710861 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86796.1||gnl|jgi|Alide2_4493 inference ab initio prediction:Prodigal:1.4 4711697 4710930 gene locus_tag Alide2_4494 4711697 4710930 CDS product MTA/SAH nucleosidase EC_number 3.2.2.9 transl_table 11 protein_id gb|AEB86797.1||gnl|jgi|Alide2_4494 note TIGRFAM: MTA/SAH nucleosidase~KEGG: dia:Dtpsy_3298 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase~PFAM: Nucleoside phosphorylase domain inference protein motif:TFAM:TIGR01704 db_xref GO:0008782 db_xref GO:0008930 db_xref InterPro:IPR000845 db_xref InterPro:IPR010049 4713433 4711757 gene locus_tag Alide2_4495 4713433 4711757 CDS product Long-chain-fatty-acid--CoA ligase EC_number 6.2.1.3 transl_table 11 protein_id gb|AEB86798.1||gnl|jgi|Alide2_4495 note KEGG: ajs:Ajs_3950 AMP-dependent synthetase and ligase~PFAM: AMP-dependent synthetase/ligase inference protein motif:PRIAM:6.2.1.3 db_xref InterPro:IPR000873 4714936 4713524 gene locus_tag Alide2_4496 4714936 4713524 CDS product NAD(P)(+) transhydrogenase (AB-specific) EC_number 1.6.1.2 transl_table 11 protein_id gb|AEB86799.1||gnl|jgi|Alide2_4496 note KEGG: ctt:CtCNB1_0258 NAD(P) transhydrogenase, beta subunit~PFAM: NAD(P) transhydrogenase, beta subunit inference protein motif:PRIAM:1.6.1.2 db_xref InterPro:IPR004003 4716583 4714973 gene locus_tag Alide2_4497 4716583 4714973 CDS product NAD(P) transhydrogenase, alpha subunit transl_table 11 protein_id gb|AEB86800.1||gnl|jgi|Alide2_4497 note KEGG: bpt:Bpet4170 NAD(P) transhydrogenase subunit alpha~TIGRFAM: NAD(P) transhydrogenase, alpha subunit~PFAM: Alanine dehydrogenase/PNT, C-terminal; Alanine dehydrogenase/PNT, N-terminal inference protein motif:TFAM:TIGR00561 db_xref GO:0008750 db_xref InterPro:IPR004571 db_xref InterPro:IPR007698 db_xref InterPro:IPR007886 4717357 4716638 gene locus_tag Alide2_4498 4717357 4716638 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86801.1||gnl|jgi|Alide2_4498 note KEGG: dia:Dtpsy_3302 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_3302 4718545 4717481 gene locus_tag Alide2_4499 4718545 4717481 CDS product fructose-bisphosphate aldolase, class II, Calvin cycle subtype EC_number 4.1.2.13 transl_table 11 protein_id gb|AEB86802.1||gnl|jgi|Alide2_4499 note TIGRFAM: Fructose-bisphosphate aldolase, class II, Calvin cycle subtype; Ketose-bisphosphate aldolase, class-II~KEGG: dia:Dtpsy_3304 fructose-bisphosphate aldolase, class II, Calvin cycle subtype~PFAM: Ketose-bisphosphate aldolase, class-II inference protein motif:TFAM:TIGR01521 db_xref GO:0004332 db_xref GO:0008270 db_xref InterPro:IPR000771 db_xref InterPro:IPR006412 4720125 4718683 gene locus_tag Alide2_4500 4720125 4718683 CDS product pyruvate kinase EC_number 2.7.1.40 transl_table 11 protein_id gb|AEB86803.1||gnl|jgi|Alide2_4500 note TIGRFAM: Pyruvate kinase~KEGG: dia:Dtpsy_3305 pyruvate kinase~PFAM: Pyruvate kinase, barrel; Pyruvate kinase, C-terminal-like inference protein motif:TFAM:TIGR01064 db_xref GO:0000287 db_xref GO:0004743 db_xref GO:0030955 db_xref InterPro:IPR001697 db_xref InterPro:IPR015793 db_xref InterPro:IPR015795 4721583 4720201 gene locus_tag Alide2_4501 4721583 4720201 CDS product Xaa-Pro aminopeptidase EC_number 3.4.11.9 transl_table 11 protein_id gb|AEB86804.1||gnl|jgi|Alide2_4501 note KEGG: dia:Dtpsy_3306 peptidase M24B X-Pro dipeptidase/aminopeptidase domain protein~PFAM: Peptidase M24, structural domain; Peptidase M24B, X-Pro dipeptidase/aminopeptidase P N-terminal inference protein motif:PRIAM:3.4.11.9 db_xref InterPro:IPR000994 db_xref InterPro:IPR007865 4722584 4721805 gene locus_tag Alide2_4502 4722584 4721805 CDS product Enoyl-CoA hydratase/isomerase transl_table 11 protein_id gb|AEB86805.1||gnl|jgi|Alide2_4502 note PFAM: Crotonase, core~KEGG: dac:Daci_0802 enoyl-CoA hydratase inference protein motif:PFAM:PF00378 db_xref GO:0003824 db_xref InterPro:IPR001753 4723555 4722584 gene locus_tag Alide2_4503 4723555 4722584 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86806.1||gnl|jgi|Alide2_4503 note KEGG: dac:Daci_0801 hypothetical protein inference similar to AA sequence:KEGG:Daci_0801 db_xref InterPro:IPR005064 4724734 4723556 gene locus_tag Alide2_4504 4724734 4723556 CDS product Formyl-CoA transferase EC_number 2.8.3.16 transl_table 11 protein_id gb|AEB86807.1||gnl|jgi|Alide2_4504 note KEGG: xtr:100495402 caiB/baiF CoA-transferase family protein DDB_G0269880-like~PFAM: CoA-transferase family III inference protein motif:PRIAM:2.8.3.16 db_xref InterPro:IPR003673 4725908 4724745 gene locus_tag Alide2_4505 4725908 4724745 CDS product Thiolase domain-containing protein transl_table 11 protein_id gb|AEB86808.1||gnl|jgi|Alide2_4505 note PFAM: Thiolase, C-terminal~KEGG: rme:Rmet_5111 thiolase inference protein motif:PFAM:PF02803 db_xref GO:0003824 db_xref InterPro:IPR020617 4726306 4725905 gene locus_tag Alide2_4506 4726306 4725905 CDS product protein of unknown function DUF35 transl_table 11 protein_id gb|AEB86809.1||gnl|jgi|Alide2_4506 note PFAM: Domain of unknown function DUF35, OB-fold, C-terminal; Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal~KEGG: axy:AXYL_04666 hypothetical protein inference protein motif:PFAM:PF01796 db_xref InterPro:IPR002878 db_xref InterPro:IPR022002 4727318 4726311 gene locus_tag Alide2_4507 4727318 4726311 CDS product extra-cytoplasmic solute receptor family protein 120 transl_table 11 protein_id gb|AEB86810.1||gnl|jgi|Alide2_4507 note KEGG: axy:AXYL_04659 extra-cytoplasmic solute receptor family protein 120 inference similar to AA sequence:KEGG:AXYL_04659 db_xref InterPro:IPR005064 4728386 4727478 gene locus_tag Alide2_4508 4728386 4727478 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB86811.1||gnl|jgi|Alide2_4508 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: xtr:100494792 uncharacterized HTH-type transcriptional regulator ywbI-like inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 4729168 4728392 gene locus_tag Alide2_4509 4729168 4728392 CDS product Nucleotidyl transferase transl_table 11 protein_id gb|AEB86812.1||gnl|jgi|Alide2_4509 note PFAM: Nucleotidyl transferase~KEGG: ajs:Ajs_3958 nucleotidyl transferase inference protein motif:PFAM:PF00483 db_xref GO:0016779 db_xref InterPro:IPR005835 4729243 4731279 gene locus_tag Alide2_4510 4729243 4731279 CDS product transketolase EC_number 2.2.1.1 transl_table 11 protein_id gb|AEB86813.1||gnl|jgi|Alide2_4510 note SMART: Transketolase-like, pyrimidine-binding domain~TIGRFAM: Transketolase, bacterial-like~KEGG: dia:Dtpsy_3309 transketolase~PFAM: Transketolase, N-terminal; Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal inference protein motif:TFAM:TIGR00232 db_xref GO:0004802 db_xref InterPro:IPR005474 db_xref InterPro:IPR005475 db_xref InterPro:IPR005476 db_xref InterPro:IPR005478 4731310 4732311 gene locus_tag Alide2_4511 4731310 4732311 CDS product glyceraldehyde-3-phosphate dehydrogenase, type I EC_number 1.2.1.12 transl_table 11 protein_id gb|AEB86814.1||gnl|jgi|Alide2_4511 note SMART: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain~TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I~KEGG: ajs:Ajs_3960 glyceraldehyde-3-phosphate dehydrogenase~PFAM: Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain inference protein motif:TFAM:TIGR01534 db_xref GO:0008943 db_xref GO:0051287 db_xref InterPro:IPR006424 db_xref InterPro:IPR020828 db_xref InterPro:IPR020829 4732817 4732473 gene locus_tag Alide2_4512 4732817 4732473 CDS product sigma 54 modulation protein/ribosomal protein S30EA transl_table 11 protein_id gb|AEB86815.1||gnl|jgi|Alide2_4512 note PFAM: Ribosomal protein S30Ae/sigma 54 modulation protein~KEGG: dia:Dtpsy_3312 ribosomal subunit interface protein, putative inference protein motif:PFAM:PF02482 db_xref GO:0005488 db_xref InterPro:IPR003489 4732991 4733872 gene locus_tag Alide2_4513 4732991 4733872 CDS product peptidase C26 transl_table 11 protein_id gb|AEB86816.1||gnl|jgi|Alide2_4513 note PFAM: Peptidase C26~KEGG: dia:Dtpsy_3313 peptidase C26 inference protein motif:PFAM:PF07722 db_xref GO:0016787 db_xref InterPro:IPR011697 4734757 4733873 gene locus_tag Alide2_4514 4734757 4733873 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB86817.1||gnl|jgi|Alide2_4514 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: pol:Bpro_2148 LysR family transcriptional regulator inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 4734878 4735768 gene locus_tag Alide2_4515 4734878 4735768 CDS product amidohydrolase 2 transl_table 11 protein_id gb|AEB86818.1||gnl|jgi|Alide2_4515 note PFAM: Amidohydrolase 2~KEGG: pol:Bpro_2147 amidohydrolase 2 inference protein motif:PFAM:PF04909 db_xref GO:0003824 db_xref InterPro:IPR006992 4735811 4736641 gene locus_tag Alide2_4516 4735811 4736641 CDS product 3-oxoacyl-(acyl-carrier-protein) reductase EC_number 1.1.1.100 transl_table 11 protein_id gb|AEB86819.1||gnl|jgi|Alide2_4516 note KEGG: pol:Bpro_2146 short-chain dehydrogenase/reductase SDR~PFAM: Short-chain dehydrogenase/reductase SDR inference protein motif:PRIAM:1.1.1.100 db_xref InterPro:IPR002198 4736698 4737669 gene locus_tag Alide2_4517 4736698 4737669 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86820.1||gnl|jgi|Alide2_4517 note KEGG: pol:Bpro_2145 hypothetical protein inference similar to AA sequence:KEGG:Bpro_2145 db_xref InterPro:IPR005064 4737693 4738214 gene locus_tag Alide2_4518 4737693 4738214 CDS product Carboxymuconolactone decarboxylase transl_table 11 protein_id gb|AEB86821.1||gnl|jgi|Alide2_4518 note PFAM: Carboxymuconolactone decarboxylase~KEGG: pol:Bpro_2144 carboxymuconolactone decarboxylase inference protein motif:PFAM:PF02627 db_xref InterPro:IPR003779 4738211 4738924 gene locus_tag Alide2_4519 4738211 4738924 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86822.1||gnl|jgi|Alide2_4519 note KEGG: pol:Bpro_2143 hypothetical protein inference similar to AA sequence:KEGG:Bpro_2143 4740163 4738949 gene locus_tag Alide2_4520 4740163 4738949 CDS product PepSY-associated TM helix domain-containing protein transl_table 11 protein_id gb|AEB86823.1||gnl|jgi|Alide2_4520 note KEGG: dac:Daci_2267 PepSY-associated TM helix domain-containing protein inference similar to AA sequence:KEGG:Daci_2267 db_xref InterPro:IPR005625 4742370 4740163 gene locus_tag Alide2_4521 4742370 4740163 CDS product TonB-dependent siderophore receptor transl_table 11 protein_id gb|AEB86824.1||gnl|jgi|Alide2_4521 note KEGG: ctt:CtCNB1_3496 TonB-dependent siderophore receptor~TIGRFAM: TonB-dependent siderophore receptor~PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel inference protein motif:TFAM:TIGR01783 db_xref GO:0004872 db_xref GO:0005506 db_xref GO:0015343 db_xref InterPro:IPR000531 db_xref InterPro:IPR010105 db_xref InterPro:IPR012910 4742984 4742511 gene locus_tag Alide2_4522 4742984 4742511 CDS product peptidylprolyl isomerase, FKBP-type transl_table 11 protein_id gb|AEB86825.1||gnl|jgi|Alide2_4522 note KEGG: dia:Dtpsy_3314 peptidylprolyl isomerase, FKBP-type inference similar to AA sequence:KEGG:Dtpsy_3314 4744010 4743039 gene locus_tag Alide2_4523 4744010 4743039 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86826.1||gnl|jgi|Alide2_4523 note KEGG: ctt:CtCNB1_4653 TctC inference similar to AA sequence:KEGG:CtCNB1_4653 db_xref InterPro:IPR005064 4744395 4744042 gene locus_tag Alide2_4524 4744395 4744042 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86827.1||gnl|jgi|Alide2_4524 note KEGG: ctt:CtCNB1_4654 hypothetical protein inference similar to AA sequence:KEGG:CtCNB1_4654 4745775 4744414 gene locus_tag Alide2_4525 4745775 4744414 CDS product protein of unknown function DUF1446 transl_table 11 protein_id gb|AEB86828.1||gnl|jgi|Alide2_4525 note PFAM: Protein of unknown function DUF1446~KEGG: ctt:CtCNB1_4655 NAD-dependent aldehyde dehydrogenase inference protein motif:PFAM:PF07287 db_xref InterPro:IPR010839 4745884 4746774 gene locus_tag Alide2_4526 4745884 4746774 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB86829.1||gnl|jgi|Alide2_4526 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: ctt:CtCNB1_4656 transcriptional regulator, LysR family inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 4747350 4746874 gene locus_tag Alide2_4527 4747350 4746874 CDS product transcriptional activator ligand binding domain protein transl_table 11 protein_id gb|AEB86830.1||gnl|jgi|Alide2_4527 note KEGG: aav:Aave_4607 transcription activator, effector binding~PFAM: Bacterial transcription activator, effector binding~SMART: Bacterial transcription activator, effector binding inference protein motif:PFAM:PF06445 db_xref InterPro:IPR010499 4748707 4747652 gene locus_tag Alide2_4528 4748707 4747652 CDS product short-chain dehydrogenase/reductase SDR transl_table 11 protein_id gb|AEB86831.1||gnl|jgi|Alide2_4528 note PFAM: Short-chain dehydrogenase/reductase SDR~KEGG: dia:Dtpsy_3318 short-chain dehydrogenase/reductase SDR inference protein motif:PFAM:PF00106 db_xref GO:0016491 db_xref InterPro:IPR002198 4749427 4748804 gene locus_tag Alide2_4529 4749427 4748804 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86832.1||gnl|jgi|Alide2_4529 note KEGG: dia:Dtpsy_3319 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_3319 4750201 4749455 gene locus_tag Alide2_4530 4750201 4749455 CDS product DTW domain containing protein transl_table 11 protein_id gb|AEB86833.1||gnl|jgi|Alide2_4530 note PFAM: DTW~KEGG: ajs:Ajs_3970 DTW domain-containing protein inference protein motif:PFAM:PF03942 db_xref InterPro:IPR005636 4750379 4751221 gene locus_tag Alide2_4531 4750379 4751221 CDS product transcriptional regulator, IclR family transl_table 11 protein_id gb|AEB86834.1||gnl|jgi|Alide2_4531 note KEGG: ajs:Ajs_3971 IclR family transcriptional regulator~PFAM: Transcription regulator IclR, N-terminal; Transcription regulator IclR, C-terminal~SMART: Transcription regulator IclR, N-terminal inference protein motif:PFAM:PF09339 db_xref GO:0003677 db_xref InterPro:IPR005471 db_xref InterPro:IPR014757 4751218 4752369 gene locus_tag Alide2_4532 4751218 4752369 CDS product thiolase transl_table 11 protein_id gb|AEB86835.1||gnl|jgi|Alide2_4532 note KEGG: ajs:Ajs_3972 thiolase inference similar to AA sequence:KEGG:Ajs_3972 4752372 4752731 gene locus_tag Alide2_4533 4752372 4752731 CDS product protein of unknown function DUF35 transl_table 11 protein_id gb|AEB86836.1||gnl|jgi|Alide2_4533 note PFAM: Domain of unknown function DUF35, OB-fold, C-terminal~KEGG: ajs:Ajs_3973 hypothetical protein inference protein motif:PFAM:PF01796 db_xref InterPro:IPR002878 4752754 4753731 gene locus_tag Alide2_4534 4752754 4753731 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86837.1||gnl|jgi|Alide2_4534 note KEGG: dia:Dtpsy_3324 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_3324 db_xref InterPro:IPR005064 4753740 4755827 gene locus_tag Alide2_4535 4753740 4755827 CDS product CoA-binding domain protein transl_table 11 protein_id gb|AEB86838.1||gnl|jgi|Alide2_4535 note KEGG: dia:Dtpsy_3325 CoA-binding domain protein~PFAM: CoA-binding; ATP-grasp fold, succinyl-CoA synthetase-type~SMART: CoA-binding inference protein motif:PFAM:PF02629 db_xref InterPro:IPR003781 db_xref InterPro:IPR013650 4756574 4755876 gene locus_tag Alide2_4536 4756574 4755876 CDS product Glutathione S-transferase domain protein transl_table 11 protein_id gb|AEB86839.1||gnl|jgi|Alide2_4536 note PFAM: Glutathione S-transferase, N-terminal; Glutathione S-transferase, C-terminal~KEGG: ajs:Ajs_3976 glutathione S-transferase domain-containing protein inference protein motif:PFAM:PF02798 db_xref InterPro:IPR004045 db_xref InterPro:IPR004046 4757338 4756577 gene locus_tag Alide2_4537 4757338 4756577 CDS product 3-oxoacyl-(acyl-carrier-protein) reductase EC_number 1.1.1.100 transl_table 11 protein_id gb|AEB86840.1||gnl|jgi|Alide2_4537 note KEGG: ajs:Ajs_3977 3-ketoacyl-(acyl-carrier-protein) reductase~PFAM: Short-chain dehydrogenase/reductase SDR inference protein motif:PRIAM:1.1.1.100 db_xref InterPro:IPR002198 4757767 4757366 gene locus_tag Alide2_4538 4757767 4757366 CDS product Glyoxalase/bleomycin resistance protein/dioxygenase transl_table 11 protein_id gb|AEB86841.1||gnl|jgi|Alide2_4538 note PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase~KEGG: ajs:Ajs_3978 glyoxalase/bleomycin resistance protein/dioxygenase inference protein motif:PFAM:PF00903 db_xref InterPro:IPR004360 4760733 4757812 gene locus_tag Alide2_4539 4760733 4757812 CDS product DNA topoisomerase III EC_number 5.99.1.2 transl_table 11 protein_id gb|AEB86842.1||gnl|jgi|Alide2_4539 note SMART: DNA topoisomerase, type IA, DNA-binding; SWIB domain; DNA topoisomerase, type IA, domain 2; Toprim domain~TIGRFAM: DNA topoisomerase III, bacterial-type~KEGG: ajs:Ajs_3990 DNA topoisomerase III~PFAM: DNA topoisomerase, type IA, central; SWIB/MDM2 domain; Toprim domain inference protein motif:TFAM:TIGR01056 db_xref GO:0003677 db_xref GO:0003916 db_xref InterPro:IPR003121 db_xref InterPro:IPR003601 db_xref InterPro:IPR003602 db_xref InterPro:IPR005738 db_xref InterPro:IPR006171 db_xref InterPro:IPR013497 db_xref InterPro:IPR019835 4760834 4761385 gene locus_tag Alide2_4540 4760834 4761385 CDS product nuclear protein SET transl_table 11 protein_id gb|AEB86843.1||gnl|jgi|Alide2_4540 note KEGG: dia:Dtpsy_3340 nuclear protein SET~PFAM: SET domain~SMART: SET domain; Post-SET domain inference protein motif:PFAM:PF00856 db_xref InterPro:IPR001214 db_xref InterPro:IPR003616 4761382 4762212 gene locus_tag Alide2_4541 4761382 4762212 CDS product biotin/acetyl-CoA-carboxylase ligase transl_table 11 protein_id gb|AEB86844.1||gnl|jgi|Alide2_4541 note KEGG: dia:Dtpsy_3341 biotin/acetyl-CoA-carboxylase ligase~TIGRFAM: Biotin--acetyl-CoA-carboxylase ligase~PFAM: Biotin/lipoate A/B protein ligase; Biotin protein ligase, C-terminal inference protein motif:TFAM:TIGR00121 db_xref GO:0004077 db_xref InterPro:IPR003142 db_xref InterPro:IPR004143 db_xref InterPro:IPR004408 4762369 4763040 gene locus_tag Alide2_4542 4762369 4763040 CDS product Sporulation domain-containing protein transl_table 11 protein_id gb|AEB86845.1||gnl|jgi|Alide2_4542 note PFAM: Sporulation-related domain~KEGG: dia:Dtpsy_3342 sporulation domain protein inference protein motif:PFAM:PF05036 db_xref InterPro:IPR007730 4764085 4763048 gene locus_tag Alide2_4543 4764085 4763048 CDS product NADPH:quinone reductase EC_number 1.6.5.5 transl_table 11 protein_id gb|AEB86846.1||gnl|jgi|Alide2_4543 note KEGG: pna:Pnap_2134 alcohol dehydrogenase~PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like inference protein motif:PRIAM:1.6.5.5 db_xref InterPro:IPR013149 db_xref InterPro:IPR013154 4764537 4764082 gene locus_tag Alide2_4544 4764537 4764082 CDS product MaoC domain protein dehydratase transl_table 11 protein_id gb|AEB86847.1||gnl|jgi|Alide2_4544 note PFAM: MaoC-like dehydratase~KEGG: axy:AXYL_04788 MaoC-like domain-containing protein 10 inference protein motif:PFAM:PF01575 db_xref GO:0016491 db_xref InterPro:IPR002539 4764994 4764524 gene locus_tag Alide2_4545 4764994 4764524 CDS product acyl dehydratase 3 transl_table 11 protein_id gb|AEB86848.1||gnl|jgi|Alide2_4545 note KEGG: axy:AXYL_04789 acyl dehydratase 3 inference similar to AA sequence:KEGG:AXYL_04789 4766201 4765005 gene locus_tag Alide2_4546 4766201 4765005 CDS product Extracellular ligand-binding receptor transl_table 11 protein_id gb|AEB86849.1||gnl|jgi|Alide2_4546 note PFAM: Extracellular ligand-binding receptor~KEGG: xtr:100489190 leu/Ile/Val-binding protein homolog 6-like inference protein motif:PFAM:PF01094 db_xref InterPro:IPR001828 4768243 4766261 gene locus_tag Alide2_4547 4768243 4766261 CDS product Acetate--CoA ligase EC_number 6.2.1.1 transl_table 11 protein_id gb|AEB86850.1||gnl|jgi|Alide2_4547 note KEGG: bur:Bcep18194_C7155 AMP-dependent synthetase and ligase~PFAM: AMP-dependent synthetase/ligase inference protein motif:PRIAM:6.2.1.1 db_xref InterPro:IPR000873 4768375 4768881 gene locus_tag Alide2_4548 4768375 4768881 CDS product transcriptional regulator, MarR family transl_table 11 protein_id gb|AEB86851.1||gnl|jgi|Alide2_4548 note KEGG: vei:Veis_4103 MarR family transcriptional regulator~PFAM: HTH transcriptional regulator, MarR~SMART: HTH transcriptional regulator, MarR inference protein motif:PFAM:PF01047 db_xref GO:0003700 db_xref InterPro:IPR000835 4768963 4769334 gene locus_tag Alide2_4549 4768963 4769334 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86852.1||gnl|jgi|Alide2_4549 note KEGG: afw:Anae109_4130 hypothetical protein inference similar to AA sequence:KEGG:Anae109_4130 4769602 4770300 gene locus_tag Alide2_4550 4769602 4770300 CDS product RES domain protein transl_table 11 protein_id gb|AEB86853.1||gnl|jgi|Alide2_4550 note KEGG: azo:azo2874 hypothetical protein~PFAM: RES~SMART: RES inference protein motif:PFAM:PF08808 db_xref InterPro:IPR014914 4771384 4770311 gene locus_tag Alide2_4551 4771384 4770311 CDS product NAD/NADP octopine/nopaline dehydrogenase transl_table 11 protein_id gb|AEB86854.1||gnl|jgi|Alide2_4551 note PFAM: Opine dehydrogenase; Ketopantoate reductase ApbA/PanE, N-terminal~KEGG: vap:Vapar_0420 NAD/NADP octopine/nopaline dehydrogenase inference protein motif:PFAM:PF02317 db_xref GO:0016491 db_xref GO:0050662 db_xref InterPro:IPR003421 db_xref InterPro:IPR013332 4772409 4771381 gene locus_tag Alide2_4552 4772409 4771381 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86855.1||gnl|jgi|Alide2_4552 note KEGG: vap:Vapar_0421 hypothetical protein inference similar to AA sequence:KEGG:Vapar_0421 db_xref InterPro:IPR005064 4773886 4772441 gene locus_tag Alide2_4553 4773886 4772441 CDS product integral membrane sensor signal transduction histidine kinase transl_table 11 protein_id gb|AEB86856.1||gnl|jgi|Alide2_4553 note KEGG: dia:Dtpsy_3348 histidine kinase~PFAM: Two-component sensor kinase N-terminal; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; ATPase-like, ATP-binding domain~SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain inference protein motif:PFAM:PF08521 db_xref GO:0000155 db_xref GO:0004871 db_xref GO:0005524 db_xref InterPro:IPR003594 db_xref InterPro:IPR003660 db_xref InterPro:IPR003661 db_xref InterPro:IPR013727 4774626 4773952 gene locus_tag Alide2_4554 4774626 4773952 CDS product two component transcriptional regulator, winged helix family transl_table 11 protein_id gb|AEB86857.1||gnl|jgi|Alide2_4554 note KEGG: ajs:Ajs_3999 two component transcriptional regulator~PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal~SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal inference protein motif:PFAM:PF00072 db_xref GO:0000156 db_xref GO:0003677 db_xref InterPro:IPR001789 db_xref InterPro:IPR001867 4775884 4774754 gene locus_tag Alide2_4555 4775884 4774754 CDS product 2-aminoethylphosphonate--pyruvate transaminase EC_number 2.6.1.37 transl_table 11 protein_id gb|AEB86858.1||gnl|jgi|Alide2_4555 note PFAM: Aminotransferase, class V/Cysteine desulfurase~TIGRFAM: 2-aminoethylphosphonate--pyruvate transaminase; 2-aminoethylphosphonate aminotransferase~HAMAP: 2-aminoethylphosphonate--pyruvate transaminase~KEGG: bcj:BCAL0446 2-aminoethylphosphonate--pyruvate transaminase inference protein motif:HAMAP:MF_01376 db_xref InterPro:IPR000192 db_xref InterPro:IPR012703 db_xref InterPro:IPR017688 4777640 4775919 gene locus_tag Alide2_4556 4777640 4775919 CDS product 2-aminoethylphosphonate ABC transport system, permease protein transl_table 11 protein_id gb|AEB86859.1||gnl|jgi|Alide2_4556 note KEGG: reu:Reut_B5872 binding-protein dependent transport system inner membrane protein~TIGRFAM: 2-aminoethylphosphonate ABC transport system, permease protein, putative~PFAM: Binding-protein-dependent transport systems inner membrane component inference protein motif:TFAM:TIGR03262 db_xref InterPro:IPR000515 db_xref InterPro:IPR017664 4778770 4777637 gene locus_tag Alide2_4557 4778770 4777637 CDS product 2-aminoethylphosphonate ABC transport system, ATP-binding protein component EC_number 3.6.3.31 transl_table 11 protein_id gb|AEB86860.1||gnl|jgi|Alide2_4557 note SMART: ATPase, AAA+ type, core~TIGRFAM: 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2~KEGG: reu:Reut_B5873 ABC transporter related~PFAM: ABC transporter-like inference protein motif:TFAM:TIGR03265 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 db_xref InterPro:IPR017666 4779885 4778848 gene locus_tag Alide2_4558 4779885 4778848 CDS product 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component transl_table 11 protein_id gb|AEB86861.1||gnl|jgi|Alide2_4558 note KEGG: reu:Reut_B5874 extracellular solute-binding protein~TIGRFAM: 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component~PFAM: Bacterial extracellular solute-binding, family 1 inference protein motif:TFAM:TIGR03261 db_xref InterPro:IPR006059 db_xref InterPro:IPR017663 4780028 4780756 gene locus_tag Alide2_4559 4780028 4780756 CDS product transcriptional regulator, GntR family transl_table 11 protein_id gb|AEB86862.1||gnl|jgi|Alide2_4559 note TIGRFAM: Transcription regulator, 2-aminoethylphosphonate utilisation-associated~PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR~KEGG: reu:Reut_B5875 GntR family transcriptional regulator~SMART: GntR, C-terminal; HTH transcriptional regulator, GntR inference protein motif:TFAM:TIGR03338 db_xref InterPro:IPR000524 db_xref InterPro:IPR011711 db_xref InterPro:IPR017723 4780758 4781993 gene locus_tag Alide2_4560 4780758 4781993 CDS product phosphonoacetate hydrolase transl_table 11 protein_id gb|AEB86863.1||gnl|jgi|Alide2_4560 note KEGG: reu:Reut_B5876 type I phosphodiesterase/nucleotide pyrophosphatase~TIGRFAM: Phosphonoacetate hydrolase~PFAM: Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase inference protein motif:TFAM:TIGR02335 db_xref InterPro:IPR002591 db_xref InterPro:IPR012710 4782028 4783476 gene locus_tag Alide2_4561 4782028 4783476 CDS product phosphonoacetaldehyde dehydrogenase EC_number 1.2.1.8 transl_table 11 protein_id gb|AEB86864.1||gnl|jgi|Alide2_4561 note TIGRFAM: Putative phosphonoacetaldehyde dehydrogenase~KEGG: cti:RALTA_B0682 NAD+ dependent acetaldehyde dehydrogenase~PFAM: Aldehyde dehydrogenase domain inference protein motif:TFAM:TIGR03250 db_xref InterPro:IPR015590 db_xref InterPro:IPR017656 4783482 4784021 gene locus_tag Alide2_4562 4783482 4784021 CDS product phosphonate degradation operons associated HDIG domain protein transl_table 11 protein_id gb|AEB86865.1||gnl|jgi|Alide2_4562 note TIGRFAM: Phosphonate degradation operon associated HDIG domain protein~KEGG: vei:Veis_1186 HD phosphohydrolase-like protein inference protein motif:TFAM:TIGR03276 db_xref InterPro:IPR017670 4784121 4785509 gene locus_tag Alide2_4563 4784121 4785509 CDS product aminophosphonate oxidoreductase transl_table 11 protein_id gb|AEB86866.1||gnl|jgi|Alide2_4563 note KEGG: bcm:Bcenmc03_3163 aminophosphonate oxidoreductase~TIGRFAM: Putative aminophosphonate oxidoreductase~PFAM: FAD dependent oxidoreductase inference protein motif:TFAM:TIGR03329 db_xref InterPro:IPR006076 db_xref InterPro:IPR017715 4786724 4785648 gene locus_tag Alide2_4564 4786724 4785648 CDS product alanine racemase EC_number 5.1.1.1 transl_table 11 protein_id gb|AEB86867.1||gnl|jgi|Alide2_4564 note TIGRFAM: Alanine racemase~KEGG: tmz:Tmz1t_3995 alanine racemase~PFAM: Alanine racemase, N-terminal; Alanine racemase, C-terminal inference protein motif:TFAM:TIGR00492 db_xref GO:0008784 db_xref InterPro:IPR000821 db_xref InterPro:IPR001608 db_xref InterPro:IPR011079 4788031 4786721 gene locus_tag Alide2_4565 4788031 4786721 CDS product D-amino acid dehydrogenase small subunit EC_number 1.4.99.1 transl_table 11 protein_id gb|AEB86868.1||gnl|jgi|Alide2_4565 note HAMAP: D-amino acid dehydrogenase small subunit, DadA~KEGG: dac:Daci_3117 D-amino acid dehydrogenase small subunit~PFAM: FAD dependent oxidoreductase inference protein motif:HAMAP:MF_01202 db_xref InterPro:IPR006076 db_xref InterPro:IPR023080 4788158 4788670 gene locus_tag Alide2_4566 4788158 4788670 CDS product transcriptional regulator, AsnC family transl_table 11 protein_id gb|AEB86869.1||gnl|jgi|Alide2_4566 note KEGG: vap:Vapar_3966 transcriptional regulator, AsnC family~PFAM: Transcription regulator AsnC-type, C-terminal~SMART: Transcription regulator AsnC-type inference protein motif:PFAM:PF01037 db_xref GO:0003700 db_xref GO:0043565 db_xref InterPro:IPR019887 db_xref InterPro:IPR019888 4789134 4788655 gene locus_tag Alide2_4567 4789134 4788655 CDS product regulatory protein MarR transl_table 11 protein_id gb|AEB86870.1||gnl|jgi|Alide2_4567 note PFAM: HTH transcriptional regulator, MarR~KEGG: ajs:Ajs_4000 MarR family transcriptional regulator inference protein motif:PFAM:PF01047 db_xref GO:0003700 db_xref InterPro:IPR000835 4789281 4790390 gene locus_tag Alide2_4568 4789281 4790390 CDS product recA protein transl_table 11 protein_id gb|AEB86871.1||gnl|jgi|Alide2_4568 note TIGRFAM: DNA recombination and repair protein RecA~PFAM: DNA recombination and repair protein RecA~KEGG: dia:Dtpsy_3351 RecA protein~SMART: ATPase, AAA+ type, core inference protein motif:TFAM:TIGR02012 db_xref GO:0003697 db_xref GO:0005524 db_xref InterPro:IPR003593 db_xref InterPro:IPR013765 4790471 4790929 gene locus_tag Alide2_4569 4790471 4790929 CDS product regulatory protein RecX transl_table 11 protein_id gb|AEB86872.1||gnl|jgi|Alide2_4569 note PFAM: Regulatory protein RecX~KEGG: dia:Dtpsy_3352 regulatory protein RecX inference protein motif:PFAM:PF02631 db_xref InterPro:IPR003783 4793279 4790985 gene locus_tag Alide2_4570 4793279 4790985 CDS product protein of unknown function DUF1631 transl_table 11 protein_id gb|AEB86873.1||gnl|jgi|Alide2_4570 note PFAM: Protein of unknown function DUF1631~KEGG: dia:Dtpsy_3353 hypothetical protein inference protein motif:PFAM:PF07793 db_xref InterPro:IPR012434 4794289 4793336 gene locus_tag Alide2_4571 4794289 4793336 CDS product protein-export membrane protein SecF transl_table 11 protein_id gb|AEB86874.1||gnl|jgi|Alide2_4571 note KEGG: dia:Dtpsy_3354 preprotein translocase subunit SecF~TIGRFAM: SecF protein; SecD/SecF/SecDF export membrane protein, bacteria~PFAM: Preprotein translocase, SecD/SecF/SecDF; SecD/SecF/SecDF export membrane protein, GG motif, N-terminal inference protein motif:TFAM:TIGR00966 db_xref GO:0015450 db_xref InterPro:IPR005665 db_xref InterPro:IPR022645 db_xref InterPro:IPR022646 db_xref InterPro:IPR022813 4796196 4794301 gene locus_tag Alide2_4572 4796196 4794301 CDS product protein-export membrane protein SecD transl_table 11 protein_id gb|AEB86875.1||gnl|jgi|Alide2_4572 note KEGG: dia:Dtpsy_3355 preprotein translocase subunit SecD~TIGRFAM: SecD export membrane protein; SecD/SecF/SecDF export membrane protein, bacteria~PFAM: Preprotein translocase, SecD/SecF/SecDF; SecD/SecF/SecDF export membrane protein, GG motif, N-terminal inference protein motif:TFAM:TIGR01129 db_xref GO:0015450 db_xref InterPro:IPR005791 db_xref InterPro:IPR022645 db_xref InterPro:IPR022646 db_xref InterPro:IPR022813 4796611 4796279 gene locus_tag Alide2_4573 4796611 4796279 CDS product preprotein translocase, YajC subunit transl_table 11 protein_id gb|AEB86876.1||gnl|jgi|Alide2_4573 note KEGG: dia:Dtpsy_3356 preprotein translocase, YajC subunit~TIGRFAM: Preprotein translocase YajC~PFAM: Preprotein translocase YajC inference protein motif:TFAM:TIGR00739 db_xref InterPro:IPR003849 4800432 4796815 gene locus_tag Alide2_4574 4800432 4796815 CDS product Pyruvate/ketoisovalerate oxidoreductase transl_table 11 protein_id gb|AEB86877.1||gnl|jgi|Alide2_4574 note PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; Thiamine pyrophosphate enzyme, C-terminal TPP-binding~KEGG: ajs:Ajs_4008 indolepyruvate ferredoxin oxidoreductase inference protein motif:PFAM:PF01558 db_xref GO:0003824 db_xref GO:0030976 db_xref InterPro:IPR011766 db_xref InterPro:IPR019752 4800612 4801085 gene locus_tag Alide2_4575 4800612 4801085 CDS product transcriptional regulator, AsnC family transl_table 11 protein_id gb|AEB86878.1||gnl|jgi|Alide2_4575 note KEGG: dia:Dtpsy_3359 transcriptional regulator, AsnC family~PFAM: Transcription regulator AsnC-type, C-terminal~SMART: Transcription regulator AsnC-type inference protein motif:PFAM:PF01037 db_xref GO:0003700 db_xref GO:0043565 db_xref InterPro:IPR019887 db_xref InterPro:IPR019888 4801228 4802937 gene locus_tag Alide2_4576 4801228 4802937 CDS product protein of unknown function DUF894 DitE transl_table 11 protein_id gb|AEB86879.1||gnl|jgi|Alide2_4576 note PFAM: Major facilitator superfamily, enterobactin exporter EntS~KEGG: dia:Dtpsy_3362 protein of unknown function DUF894 DitE inference protein motif:PFAM:PF05977 db_xref InterPro:IPR010290 4804245 4803046 gene locus_tag Alide2_4577 4804245 4803046 CDS product MltA domain protein transl_table 11 protein_id gb|AEB86880.1||gnl|jgi|Alide2_4577 note manually curated~PFAM: Lytic transglycosylase MltA; 3D~KEGG: ajs:Ajs_4013 MltA domain-containing protein~SMART: Lytic transglycosylase MltA inference protein motif:PFAM:PF03562 db_xref GO:0016491 db_xref InterPro:IPR005300 db_xref InterPro:IPR010611 4804428 4805072 gene locus_tag Alide2_4578 4804428 4805072 CDS product OmpA/MotB domain protein transl_table 11 protein_id gb|AEB86881.1||gnl|jgi|Alide2_4578 note PFAM: Outer membrane protein, OmpA/MotB, C-terminal~KEGG: dia:Dtpsy_3364 OmpA/MotB domain protein inference protein motif:PFAM:PF00691 db_xref InterPro:IPR006665 4805765 4805130 gene locus_tag Alide2_4579 4805765 4805130 CDS product two component transcriptional regulator, LuxR family transl_table 11 protein_id gb|AEB86882.1||gnl|jgi|Alide2_4579 note KEGG: ajs:Ajs_4015 response regulator receiver protein~PFAM: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain~SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal inference protein motif:PFAM:PF00196 db_xref GO:0000156 db_xref GO:0003700 db_xref GO:0043565 db_xref InterPro:IPR000792 db_xref InterPro:IPR001789 4807858 4805765 gene locus_tag Alide2_4580 4807858 4805765 CDS product multi-sensor signal transduction histidine kinase transl_table 11 protein_id gb|AEB86883.1||gnl|jgi|Alide2_4580 note TIGRFAM: PAS~PFAM: ATPase-like, ATP-binding domain; PAS fold; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain~KEGG: dia:Dtpsy_3366 PAS/PAC sensor signal transduction histidine kinase~SMART: ATPase-like, ATP-binding domain; PAS; PAC motif; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain inference protein motif:TFAM:TIGR00229 db_xref GO:0004871 db_xref InterPro:IPR000014 db_xref InterPro:IPR001610 db_xref InterPro:IPR003594 db_xref InterPro:IPR003661 db_xref InterPro:IPR013767 4808697 4807882 gene locus_tag Alide2_4581 4808697 4807882 CDS product Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase transl_table 11 protein_id gb|AEB86884.1||gnl|jgi|Alide2_4581 note PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase~KEGG: dia:Dtpsy_3367 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase inference protein motif:PFAM:PF00795 db_xref GO:0016491 db_xref InterPro:IPR003010 4812782 4808694 gene locus_tag Alide2_4582 4812782 4808694 CDS product Conserved hypothetical protein CHP02099 transl_table 11 protein_id gb|AEB86885.1||gnl|jgi|Alide2_4582 note TIGRFAM: Conserved hypothetical protein CHP02099~KEGG: dia:Dtpsy_3368 hypothetical protein inference protein motif:TFAM:TIGR02099 db_xref InterPro:IPR011836 4812876 4815623 gene locus_tag Alide2_4583 4812876 4815623 CDS product (Glutamate--ammonia-ligase) adenylyltransferase EC_number 2.7.7.42 transl_table 11 protein_id gb|AEB86886.1||gnl|jgi|Alide2_4583 note KEGG: dia:Dtpsy_3369 (glutamate--ammonia-ligase) adenylyltransferase~PFAM: Glutamate-ammonia ligase adenylyltransferase, repeated domain; PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase inference protein motif:PRIAM:2.7.7.42 db_xref InterPro:IPR005190 db_xref InterPro:IPR013546 4815852 4816994 gene locus_tag Alide2_4584 4815852 4816994 CDS product efflux transporter, RND family, MFP subunit transl_table 11 protein_id gb|AEB86887.1||gnl|jgi|Alide2_4584 note KEGG: dia:Dtpsy_3372 efflux transporter, RND family, MFP subunit~TIGRFAM: Secretion protein HlyD~PFAM: Secretion protein HlyD inference protein motif:TFAM:TIGR01730 db_xref GO:0008565 db_xref InterPro:IPR006143 4817007 4820066 gene locus_tag Alide2_4585 4817007 4820066 CDS product acriflavin resistance protein transl_table 11 protein_id gb|AEB86888.1||gnl|jgi|Alide2_4585 note PFAM: Acriflavin resistance protein~KEGG: ajs:Ajs_4023 acriflavin resistance protein inference protein motif:PFAM:PF00873 db_xref GO:0005215 db_xref InterPro:IPR001036 4821074 4820460 gene locus_tag Alide2_4586 4821074 4820460 CDS product Glutathione S-transferase domain protein transl_table 11 protein_id gb|AEB86889.1||gnl|jgi|Alide2_4586 note PFAM: Glutathione S-transferase, N-terminal; Glutathione S-transferase, C-terminal~KEGG: dia:Dtpsy_3375 glutathione S-transferase domain protein inference protein motif:PFAM:PF02798 db_xref InterPro:IPR004045 db_xref InterPro:IPR004046 4821187 4822566 gene locus_tag Alide2_4587 4821187 4822566 CDS product adenylosuccinate lyase EC_number 4.3.2.2 transl_table 11 protein_id gb|AEB86890.1||gnl|jgi|Alide2_4587 note TIGRFAM: Adenylosuccinate lyase~KEGG: dia:Dtpsy_3376 adenylosuccinate lyase~PFAM: Lyase 1, N-terminal; Adenylosuccinate lyase C-terminal/plant inference protein motif:TFAM:TIGR00928 db_xref GO:0004018 db_xref InterPro:IPR004769 db_xref InterPro:IPR013539 db_xref InterPro:IPR022761 4822636 4823196 gene locus_tag Alide2_4588 4822636 4823196 CDS product YaeQ family protein transl_table 11 protein_id gb|AEB86891.1||gnl|jgi|Alide2_4588 note PFAM: YaeQ~KEGG: dia:Dtpsy_3377 YaeQ family protein inference protein motif:PFAM:PF07152 db_xref InterPro:IPR009822 4823771 4823466 gene locus_tag Alide2_4589 4823771 4823466 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86892.1||gnl|jgi|Alide2_4589 note KEGG: dia:Dtpsy_3378 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_3378 4824216 4823812 gene locus_tag Alide2_4590 4824216 4823812 CDS product protein of unknown function DUF1289 transl_table 11 protein_id gb|AEB86893.1||gnl|jgi|Alide2_4590 note PFAM: Protein of unknown function DUF1289~KEGG: dia:Dtpsy_3379 protein of unknown function DUF1289 inference protein motif:PFAM:PF06945 db_xref InterPro:IPR010710 4824624 4825361 gene locus_tag Alide2_4591 4824624 4825361 CDS product integral membrane protein, YjbE family transl_table 11 protein_id gb|AEB86894.1||gnl|jgi|Alide2_4591 note KEGG: ajs:Ajs_4030 integral membrane protein TerC~TIGRFAM: Integral membrane protein YjbE~PFAM: Integral membrane protein TerC inference protein motif:TFAM:TIGR03717 db_xref InterPro:IPR005496 db_xref InterPro:IPR022301 4825396 4825866 gene locus_tag Alide2_4592 4825396 4825866 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86895.1||gnl|jgi|Alide2_4592 note KEGG: ajs:Ajs_4031 hypothetical protein inference similar to AA sequence:KEGG:Ajs_4031 4826788 4825868 gene locus_tag Alide2_4593 4826788 4825868 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB86896.1||gnl|jgi|Alide2_4593 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: rme:Rmet_4070 LysR family transcriptional regulator inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 4828131 4826828 gene locus_tag Alide2_4594 pseudo 4828290 4828646 gene locus_tag Alide2_4595 4828290 4828646 CDS product membrane protein of unknown function transl_table 11 protein_id gb|AEB86897.1||gnl|jgi|Alide2_4595 note PFAM: Membrane protein of unknown function~KEGG: dia:Dtpsy_3382 membrane protein of unknown function inference protein motif:PFAM:PF04020 db_xref InterPro:IPR007165 4830140 4828614 gene locus_tag Alide2_4596 4830140 4828614 CDS product peptidase M48 Ste24p transl_table 11 protein_id gb|AEB86898.1||gnl|jgi|Alide2_4596 note PFAM: Peptidase M48~KEGG: dia:Dtpsy_3383 peptidase M48 Ste24p inference protein motif:PFAM:PF01435 db_xref GO:0004222 db_xref InterPro:IPR001915 4830290 4830775 gene locus_tag Alide2_4597 4830290 4830775 CDS product molybdenum cofactor biosynthesis protein C transl_table 11 protein_id gb|AEB86899.1||gnl|jgi|Alide2_4597 note KEGG: ajs:Ajs_4034 GTP cyclohydrolase subunit MoaC~TIGRFAM: Molybdenum cofactor biosynthesis C~PFAM: Molybdopterin cofactor biosynthesis C (MoaC) domain inference protein motif:TFAM:TIGR00581 db_xref InterPro:IPR002820 db_xref InterPro:IPR023045 4832501 4831077 gene locus_tag Alide2_4598 4832501 4831077 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86900.1||gnl|jgi|Alide2_4598 note KEGG: nla:NLA_7720 hypothetical protein inference similar to AA sequence:KEGG:NLA_7720 4833290 4832520 gene locus_tag Alide2_4599 4833290 4832520 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86901.1||gnl|jgi|Alide2_4599 note KEGG: dia:Dtpsy_3386 FimB inference similar to AA sequence:KEGG:Dtpsy_3386 4833978 4833400 gene locus_tag Alide2_4600 4833978 4833400 CDS product type IV pilin structural subunit transl_table 11 protein_id gb|AEB86902.1||gnl|jgi|Alide2_4600 note manually curated~KEGG: pau:PA14_58730 type IV pilin structural subunit inference similar to AA sequence:KEGG:PA14_58730 db_xref InterPro:IPR012902 4835051 4834263 gene locus_tag Alide2_4601 4835051 4834263 CDS product cyclic-AMP phosphodiesterase transl_table 11 protein_id gb|AEB86903.1||gnl|jgi|Alide2_4601 note KEGG: pol:Bpro_4676 cyclic-AMP phosphodiesterase~PFAM: Beta-lactamase-like~SMART: Beta-lactamase-like inference protein motif:PFAM:PF00753 db_xref GO:0016787 db_xref InterPro:IPR001279 4835745 4835119 gene locus_tag Alide2_4602 4835745 4835119 CDS product FHA domain containing protein transl_table 11 protein_id gb|AEB86904.1||gnl|jgi|Alide2_4602 note KEGG: ajs:Ajs_4043 FHA domain-containing protein~PFAM: Forkhead-associated (FHA) domain~SMART: Forkhead-associated (FHA) domain inference protein motif:PFAM:PF00498 db_xref InterPro:IPR000253 4836613 4835807 gene locus_tag Alide2_4603 4836613 4835807 CDS product protein serine/threonine phosphatase transl_table 11 protein_id gb|AEB86905.1||gnl|jgi|Alide2_4603 note KEGG: ajs:Ajs_4044 protein phosphatase 2C domain-containing protein~PFAM: Protein phosphatase 2C, N-terminal~SMART: Protein phosphatase 2C-like inference protein motif:PFAM:PF00481 db_xref InterPro:IPR001932 db_xref InterPro:IPR014045 4837523 4836840 gene locus_tag Alide2_4604 4837523 4836840 CDS product integral membrane protein, YjbE family transl_table 11 protein_id gb|AEB86906.1||gnl|jgi|Alide2_4604 note KEGG: ajs:Ajs_4045 integral membrane protein TerC~TIGRFAM: Integral membrane protein YjbE~PFAM: Integral membrane protein TerC inference protein motif:TFAM:TIGR03717 db_xref InterPro:IPR005496 db_xref InterPro:IPR022301 4838558 4837665 gene locus_tag Alide2_4605 4838558 4837665 CDS product succinyl-CoA synthetase, alpha subunit EC_number 6.2.1.5 transl_table 11 protein_id gb|AEB86907.1||gnl|jgi|Alide2_4605 note SMART: CoA-binding~TIGRFAM: Succinyl-CoA ligase, alpha subunit~KEGG: dia:Dtpsy_3391 succinyl-CoA synthetase subunit alpha~PFAM: CoA-binding; ATP-citrate lyase/succinyl-CoA ligase inference protein motif:TFAM:TIGR01019 db_xref GO:0003824 db_xref InterPro:IPR003781 db_xref InterPro:IPR005810 db_xref InterPro:IPR005811 4839740 4838580 gene locus_tag Alide2_4606 4839740 4838580 CDS product succinyl-CoA synthetase, beta subunit EC_number 6.2.1.5 transl_table 11 protein_id gb|AEB86908.1||gnl|jgi|Alide2_4606 note TIGRFAM: Succinyl-CoA synthetase, beta subunit~KEGG: dia:Dtpsy_3392 succinyl-CoA synthetase subunit beta~PFAM: ATP-grasp fold, succinyl-CoA synthetase-type; ATP-citrate lyase/succinyl-CoA ligase inference protein motif:TFAM:TIGR01016 db_xref GO:0003824 db_xref InterPro:IPR005809 db_xref InterPro:IPR005811 db_xref InterPro:IPR013650 4839914 4840846 gene locus_tag Alide2_4607 4839914 4840846 CDS product N-acetyl-gamma-glutamyl-phosphate reductase EC_number 1.2.1.38 transl_table 11 protein_id gb|AEB86909.1||gnl|jgi|Alide2_4607 note SMART: Semialdehyde dehydrogenase, NAD-binding~TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, type 2~KEGG: dia:Dtpsy_3393 N-acetyl-gamma-glutamyl-phosphate reductase~PFAM: Semialdehyde dehydrogenase, NAD-binding inference protein motif:TFAM:TIGR01851 db_xref GO:0003942 db_xref InterPro:IPR000534 db_xref InterPro:IPR010136 4842094 4840955 gene locus_tag Alide2_4608 4842094 4840955 CDS product DNA protecting protein DprA transl_table 11 protein_id gb|AEB86910.1||gnl|jgi|Alide2_4608 note KEGG: ajs:Ajs_4049 fis family transcriptional regulator~TIGRFAM: DNA recombination-mediator protein A~PFAM: DNA recombination-mediator protein A inference protein motif:TFAM:TIGR00732 db_xref InterPro:IPR003488 4843337 4842117 gene locus_tag Alide2_4609 4843337 4842117 CDS product Peptidoglycan-binding lysin domain protein transl_table 11 protein_id gb|AEB86911.1||gnl|jgi|Alide2_4609 note KEGG: ajs:Ajs_4050 peptidoglycan-binding LysM~PFAM: Peptidoglycan-binding lysin domain~SMART: Peptidoglycan-binding Lysin subgroup inference protein motif:PFAM:PF01476 db_xref InterPro:IPR002482 db_xref InterPro:IPR018392 4843537 4844052 gene locus_tag Alide2_4610 4843537 4844052 CDS product Peptide deformylase transl_table 11 protein_id gb|AEB86912.1||gnl|jgi|Alide2_4610 note TIGRFAM: Formylmethionine deformylase~HAMAP: Formylmethionine deformylase~KEGG: dia:Dtpsy_3396 peptide deformylase~PFAM: Formylmethionine deformylase inference protein motif:HAMAP:MF_00163 db_xref InterPro:IPR000181 4844049 4844534 gene locus_tag Alide2_4611 4844049 4844534 CDS product putative lipoprotein transmembrane transl_table 11 protein_id gb|AEB86913.1||gnl|jgi|Alide2_4611 note KEGG: ajs:Ajs_4052 putative lipoprotein transmembrane inference similar to AA sequence:KEGG:Ajs_4052 4844545 4845516 gene locus_tag Alide2_4612 4844545 4845516 CDS product Methionyl-tRNA formyltransferase EC_number 2.1.2.9 transl_table 11 protein_id gb|AEB86914.1||gnl|jgi|Alide2_4612 note PFAM: Formyl transferase, N-terminal; Formyl transferase, C-terminal~TIGRFAM: Methionyl-tRNA formyltransferase~HAMAP: Methionyl-tRNA formyltransferase~KEGG: ajs:Ajs_4053 methionyl-tRNA formyltransferase inference protein motif:HAMAP:MF_00182 db_xref InterPro:IPR002376 db_xref InterPro:IPR005793 db_xref InterPro:IPR005794 4845513 4846262 gene locus_tag Alide2_4613 4845513 4846262 CDS product AzlC family protein transl_table 11 protein_id gb|AEB86915.1||gnl|jgi|Alide2_4613 note PFAM: Branched-chain amino acid transport, permease~KEGG: ajs:Ajs_4054 AzlC family protein inference protein motif:PFAM:PF03591 db_xref InterPro:IPR011606 4846259 4846594 gene locus_tag Alide2_4614 4846259 4846594 CDS product branched-chain amino acid transport transl_table 11 protein_id gb|AEB86916.1||gnl|jgi|Alide2_4614 note PFAM: Branched-chain amino acid transport, AzlD~KEGG: dia:Dtpsy_3400 branched-chain amino acid transport inference protein motif:PFAM:PF05437 db_xref InterPro:IPR008407 4846665 4847858 gene locus_tag Alide2_4615 4846665 4847858 CDS product Phosphoglycerate kinase EC_number 2.7.2.3 transl_table 11 protein_id gb|AEB86917.1||gnl|jgi|Alide2_4615 note HAMAP: Phosphoglycerate kinase~KEGG: dia:Dtpsy_3401 phosphoglycerate kinase~PFAM: Phosphoglycerate kinase inference protein motif:HAMAP:MF_00145 db_xref InterPro:IPR001576 4848018 4848704 gene locus_tag Alide2_4616 4848018 4848704 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86918.1||gnl|jgi|Alide2_4616 note KEGG: dac:Daci_0827 hypothetical protein inference similar to AA sequence:KEGG:Daci_0827 4848701 4849255 gene locus_tag Alide2_4617 4848701 4849255 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86919.1||gnl|jgi|Alide2_4617 note KEGG: dac:Daci_0826 hypothetical protein inference similar to AA sequence:KEGG:Daci_0826 4850250 4849369 gene locus_tag Alide2_4618 4850250 4849369 CDS product protein of unknown function DUF6 transmembrane transl_table 11 protein_id gb|AEB86920.1||gnl|jgi|Alide2_4618 note PFAM: Drug/metabolite transporter~KEGG: dia:Dtpsy_3402 protein of unknown function DUF6 transmembrane inference protein motif:PFAM:PF00892 db_xref InterPro:IPR000620 4850300 4851124 gene locus_tag Alide2_4619 4850300 4851124 CDS product orotidine 5'-phosphate decarboxylase EC_number 4.1.1.23 transl_table 11 protein_id gb|AEB86921.1||gnl|jgi|Alide2_4619 note SMART: Orotidine 5'-phosphate decarboxylase domain~TIGRFAM: Orotidine 5'-phosphate decarboxylase, type 2~KEGG: dia:Dtpsy_3403 orotidine 5'-phosphate decarboxylase~PFAM: Orotidine 5'-phosphate decarboxylase domain inference protein motif:TFAM:TIGR02127 db_xref GO:0004590 db_xref InterPro:IPR001754 db_xref InterPro:IPR011995 4851141 4852037 gene locus_tag Alide2_4620 4851141 4852037 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB86922.1||gnl|jgi|Alide2_4620 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: dia:Dtpsy_3404 transcriptional regulator, LysR family inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 4852157 4853149 gene locus_tag Alide2_4621 4852157 4853149 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86923.1||gnl|jgi|Alide2_4621 note KEGG: ajs:Ajs_4060 hypothetical protein inference similar to AA sequence:KEGG:Ajs_4060 db_xref InterPro:IPR005064 4853146 4854120 gene locus_tag Alide2_4622 4853146 4854120 CDS product Succinylglutamate desuccinylase/aspartoacylase transl_table 11 protein_id gb|AEB86924.1||gnl|jgi|Alide2_4622 note PFAM: Succinylglutamate desuccinylase/aspartoacylase~KEGG: dia:Dtpsy_3406 hypothetical protein inference protein motif:PFAM:PF04952 db_xref GO:0003700 db_xref InterPro:IPR007036 4854250 4856217 gene locus_tag Alide2_4623 4854250 4856217 CDS product methyl-accepting chemotaxis sensory transducer transl_table 11 protein_id gb|AEB86925.1||gnl|jgi|Alide2_4623 note KEGG: aav:Aave_4703 methyl-accepting chemotaxis sensory transducer~PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain~SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain inference protein motif:PFAM:PF00015 db_xref GO:0004871 db_xref InterPro:IPR003660 db_xref InterPro:IPR004089 4859320 4856252 gene locus_tag Alide2_4624 4859320 4856252 CDS product UvrABC system protein A transl_table 11 protein_id gb|AEB86926.1||gnl|jgi|Alide2_4624 note TIGRFAM: Excinuclease ABC, A subunit~HAMAP: Excinuclease ABC, A subunit~KEGG: dia:Dtpsy_3409 excinuclease ABC, A subunit~PFAM: ABC transporter-like inference protein motif:HAMAP:MF_00205 db_xref InterPro:IPR003439 db_xref InterPro:IPR004602 4859503 4860681 gene locus_tag Alide2_4625 4859503 4860681 CDS product major facilitator superfamily MFS_1 transl_table 11 protein_id gb|AEB86927.1||gnl|jgi|Alide2_4625 note PFAM: Major facilitator superfamily MFS-1~KEGG: ajs:Ajs_4065 major facilitator superfamily transporter inference protein motif:PFAM:PF07690 db_xref InterPro:IPR011701 4860824 4861357 gene locus_tag Alide2_4626 4860824 4861357 CDS product single-strand binding protein transl_table 11 protein_id gb|AEB86928.1||gnl|jgi|Alide2_4626 note KEGG: ajs:Ajs_4066 single-strand binding protein~TIGRFAM: Single-strand DNA-binding~PFAM: Primosome PriB/single-strand DNA-binding inference protein motif:TFAM:TIGR00621 db_xref GO:0003697 db_xref InterPro:IPR000424 db_xref InterPro:IPR011344 4863125 4861464 gene locus_tag Alide2_4627 4863125 4861464 CDS product L-lactate transport transl_table 11 protein_id gb|AEB86929.1||gnl|jgi|Alide2_4627 note KEGG: ajs:Ajs_4067 L-lactate transport~TIGRFAM: L-lactate permease~PFAM: L-lactate permease inference protein motif:TFAM:TIGR00795 db_xref GO:0015129 db_xref InterPro:IPR003804 4864486 4863365 gene locus_tag Alide2_4628 4864486 4863365 CDS product tRNA-specific 2-thiouridylase mnmA transl_table 11 protein_id gb|AEB86930.1||gnl|jgi|Alide2_4628 note TIGRFAM: tRNA-specific 2-thiouridylase~HAMAP: tRNA-specific 2-thiouridylase~KEGG: dia:Dtpsy_3413 tRNA-specific 2-thiouridylase MnmA~PFAM: tRNA-specific 2-thiouridylase inference protein motif:HAMAP:MF_00144 db_xref InterPro:IPR004506 4865469 4864483 gene locus_tag Alide2_4629 4865469 4864483 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB86931.1||gnl|jgi|Alide2_4629 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: vei:Veis_0298 LysR family transcriptional regulator inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 4865528 4866616 gene locus_tag Alide2_4630 4865528 4866616 CDS product PrpF protein transl_table 11 protein_id gb|AEB86932.1||gnl|jgi|Alide2_4630 note PFAM: PrpF protein~KEGG: vei:Veis_0299 hypothetical protein inference protein motif:PFAM:PF04303 db_xref InterPro:IPR007400 4866669 4867658 gene locus_tag Alide2_4631 4866669 4867658 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86933.1||gnl|jgi|Alide2_4631 note KEGG: vei:Veis_0300 hypothetical protein inference similar to AA sequence:KEGG:Veis_0300 db_xref InterPro:IPR005064 4867680 4868765 gene locus_tag Alide2_4632 4867680 4868765 CDS product porin Gram-negative type transl_table 11 protein_id gb|AEB86934.1||gnl|jgi|Alide2_4632 note PFAM: Porin, Gram-negative type~KEGG: vei:Veis_0301 porin inference protein motif:PFAM:PF00267 db_xref GO:0005215 db_xref InterPro:IPR001702 4868843 4869787 gene locus_tag Alide2_4633 4868843 4869787 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB86935.1||gnl|jgi|Alide2_4633 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: pna:Pnap_3816 LysR family transcriptional regulator inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 4870025 4871461 gene locus_tag Alide2_4634 4870025 4871461 CDS product precorrin 3B synthase CobZ transl_table 11 protein_id gb|AEB86936.1||gnl|jgi|Alide2_4634 note KEGG: dia:Dtpsy_3415 tricarballylate dehydrogenase~TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobZ, precorrin 3B synthase~PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal inference protein motif:TFAM:TIGR02485 db_xref InterPro:IPR003953 db_xref InterPro:IPR012831 4871448 4872635 gene locus_tag Alide2_4635 4871448 4872635 CDS product CitB domain protein transl_table 11 protein_id gb|AEB86937.1||gnl|jgi|Alide2_4635 note TIGRFAM: Citrate utilization protein B~KEGG: ajs:Ajs_4071 CitB domain-containing protein inference protein motif:TFAM:TIGR02484 db_xref InterPro:IPR012830 4872721 4873698 gene locus_tag Alide2_4636 4872721 4873698 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86938.1||gnl|jgi|Alide2_4636 note KEGG: dia:Dtpsy_3417 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_3417 db_xref InterPro:IPR005064 4875417 4873741 gene locus_tag Alide2_4637 4875417 4873741 CDS product sigma54 specific transcriptional regulator, Fis family transl_table 11 protein_id gb|AEB86939.1||gnl|jgi|Alide2_4637 note KEGG: dia:Dtpsy_3418 sigma54 specific transcriptional regulator, fis family~PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type~SMART: ATPase, AAA+ type, core inference protein motif:PFAM:PF00158 db_xref GO:0003700 db_xref GO:0005524 db_xref GO:0008134 db_xref InterPro:IPR002078 db_xref InterPro:IPR002197 db_xref InterPro:IPR003593 4875579 4877126 gene locus_tag Alide2_4638 4875579 4877126 CDS product Propionyl-CoA carboxylase EC_number 6.4.1.3 transl_table 11 protein_id gb|AEB86940.1||gnl|jgi|Alide2_4638 note KEGG: dia:Dtpsy_3419 propionyl-CoA carboxylase~PFAM: Carboxyl transferase inference protein motif:PRIAM:6.4.1.3 db_xref InterPro:IPR000022 4877156 4878166 gene locus_tag Alide2_4639 4877156 4878166 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86941.1||gnl|jgi|Alide2_4639 note KEGG: dac:Daci_1098 hypothetical protein inference similar to AA sequence:KEGG:Daci_1098 db_xref InterPro:IPR005064 4878176 4880254 gene locus_tag Alide2_4640 4878176 4880254 CDS product CoA-binding domain protein transl_table 11 protein_id gb|AEB86942.1||gnl|jgi|Alide2_4640 note KEGG: dia:Dtpsy_3421 CoA-binding domain protein~PFAM: CoA-binding~SMART: CoA-binding inference protein motif:PFAM:PF02629 db_xref InterPro:IPR003781 4880251 4881618 gene locus_tag Alide2_4641 4880251 4881618 CDS product Biotin carboxylase EC_number 6.3.4.14 transl_table 11 protein_id gb|AEB86943.1||gnl|jgi|Alide2_4641 note PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Biotin carboxylase, C-terminal; Carbamoyl-phosphate synthase, large subunit, N-terminal~KEGG: dac:Daci_1096 carbamoyl-phosphate synthase subunit L~SMART: Biotin carboxylase, C-terminal inference protein motif:PRIAM:6.3.4.14 db_xref InterPro:IPR005479 db_xref InterPro:IPR005481 db_xref InterPro:IPR005482 4881630 4881842 gene locus_tag Alide2_4642 4881630 4881842 CDS product biotin/lipoyl attachment domain-containing protein transl_table 11 protein_id gb|AEB86944.1||gnl|jgi|Alide2_4642 note PFAM: Biotin/lipoyl attachment~KEGG: dia:Dtpsy_3423 biotin/lipoyl attachment domain-containing protein inference protein motif:PFAM:PF00364 db_xref InterPro:IPR000089 4881839 4882273 gene locus_tag Alide2_4643 4881839 4882273 CDS product phenylacetic acid degradation-related protein transl_table 11 protein_id gb|AEB86945.1||gnl|jgi|Alide2_4643 note KEGG: dia:Dtpsy_3424 thioesterase superfamily protein~TIGRFAM: Phenylacetic acid degradation-related protein~PFAM: Thioesterase superfamily inference protein motif:TFAM:TIGR00369 db_xref InterPro:IPR003736 db_xref InterPro:IPR006683 4882785 4882300 gene locus_tag Alide2_4644 4882785 4882300 CDS product NUDIX hydrolase transl_table 11 protein_id gb|AEB86946.1||gnl|jgi|Alide2_4644 note PFAM: NUDIX hydrolase domain~KEGG: dia:Dtpsy_3425 NUDIX hydrolase inference protein motif:PFAM:PF00293 db_xref GO:0016787 db_xref InterPro:IPR000086 4882882 4883265 gene locus_tag Alide2_4645 4882882 4883265 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86947.1||gnl|jgi|Alide2_4645 note KEGG: dia:Dtpsy_3426 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_3426 4883375 4885492 gene locus_tag Alide2_4646 4883375 4885492 CDS product TonB-dependent copper receptor transl_table 11 protein_id gb|AEB86948.1||gnl|jgi|Alide2_4646 note KEGG: ajs:Ajs_4075 TonB-dependent copper receptor~TIGRFAM: TonB-dependent copper receptor~PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug inference protein motif:TFAM:TIGR01778 db_xref InterPro:IPR000531 db_xref InterPro:IPR010100 db_xref InterPro:IPR012910 4885713 4886177 gene locus_tag Alide2_4647 4885713 4886177 CDS product phenylacetic acid degradation-related protein transl_table 11 protein_id gb|AEB86949.1||gnl|jgi|Alide2_4647 note KEGG: met:M446_5737 thioesterase superfamily protein~TIGRFAM: Phenylacetic acid degradation-related protein~PFAM: Thioesterase superfamily inference protein motif:TFAM:TIGR00369 db_xref InterPro:IPR003736 db_xref InterPro:IPR006683 4886227 4887105 gene locus_tag Alide2_4648 4886227 4887105 CDS product transcriptional regulator, IclR family transl_table 11 protein_id gb|AEB86950.1||gnl|jgi|Alide2_4648 note KEGG: bxe:Bxe_C0866 IclR family transcriptional regulator~PFAM: Transcription regulator IclR, N-terminal; Transcription regulator IclR, C-terminal~SMART: Transcription regulator IclR, N-terminal inference protein motif:PFAM:PF09339 db_xref GO:0003677 db_xref InterPro:IPR005471 db_xref InterPro:IPR014757 4888117 4887140 gene locus_tag Alide2_4649 4888117 4887140 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86951.1||gnl|jgi|Alide2_4649 note KEGG: aav:Aave_3937 hypothetical protein inference similar to AA sequence:KEGG:Aave_3937 db_xref InterPro:IPR005064 4889346 4888153 gene locus_tag Alide2_4650 4889346 4888153 CDS product Formyl-CoA transferase EC_number 2.8.3.16 transl_table 11 protein_id gb|AEB86952.1||gnl|jgi|Alide2_4650 note KEGG: rpf:Rpic12D_1541 L-carnitine dehydratase/bile acid-inducible protein F~PFAM: CoA-transferase family III inference protein motif:PRIAM:2.8.3.16 db_xref InterPro:IPR003673 4890487 4889348 gene locus_tag Alide2_4651 4890487 4889348 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86953.1||gnl|jgi|Alide2_4651 note KEGG: pzu:PHZ_c2530 hypothetical protein inference similar to AA sequence:KEGG:PHZ_c2530 4892077 4890527 gene locus_tag Alide2_4652 4892077 4890527 CDS product Acetate--CoA ligase EC_number 6.2.1.1 transl_table 11 protein_id gb|AEB86954.1||gnl|jgi|Alide2_4652 note KEGG: gka:GK2759 acetyl-CoA synthetase (acetate-CoA ligase)~PFAM: AMP-dependent synthetase/ligase inference protein motif:PRIAM:6.2.1.1 db_xref InterPro:IPR000873 4893031 4892324 gene locus_tag Alide2_4653 4893031 4892324 CDS product riboflavin synthase, alpha subunit EC_number 2.5.1.9 transl_table 11 protein_id gb|AEB86955.1||gnl|jgi|Alide2_4653 note TIGRFAM: Lumazine-binding protein~KEGG: ajs:Ajs_4077 riboflavin synthase subunit alpha~PFAM: Lumazine-binding protein inference protein motif:TFAM:TIGR00187 db_xref GO:0004746 db_xref InterPro:IPR001783 4893161 4893775 gene locus_tag Alide2_4654 4893161 4893775 CDS product Lysine exporter protein (LYSE/YGGA) transl_table 11 protein_id gb|AEB86956.1||gnl|jgi|Alide2_4654 note PFAM: Lysine exporter protein (LYSE/YGGA)~KEGG: axy:AXYL_05416 LysE type translocator family protein 14 inference protein motif:PFAM:PF01810 db_xref InterPro:IPR001123 4895155 4893782 gene locus_tag Alide2_4655 4895155 4893782 CDS product integral membrane sensor signal transduction histidine kinase transl_table 11 protein_id gb|AEB86957.1||gnl|jgi|Alide2_4655 note KEGG: ajs:Ajs_4082 integral membrane sensor signal transduction histidine kinase~PFAM: ATPase-like, ATP-binding domain~SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain inference protein motif:PFAM:PF02518 db_xref GO:0005524 db_xref InterPro:IPR003594 db_xref InterPro:IPR003661 4896085 4895408 gene locus_tag Alide2_4656 4896085 4895408 CDS product two component transcriptional regulator, winged helix family transl_table 11 protein_id gb|AEB86958.1||gnl|jgi|Alide2_4656 note KEGG: dia:Dtpsy_3431 two component transcriptional regulator, winged helix family~PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal~SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal inference protein motif:PFAM:PF00072 db_xref GO:0000156 db_xref GO:0003677 db_xref InterPro:IPR001789 db_xref InterPro:IPR001867 4896402 4896085 gene locus_tag Alide2_4657 4896402 4896085 CDS product Propeptide PepSY amd peptidase M4 transl_table 11 protein_id gb|AEB86959.1||gnl|jgi|Alide2_4657 note PFAM: Peptidase M4, propeptide, PepSY~KEGG: dia:Dtpsy_3432 propeptide PepSY amd peptidase M4 inference protein motif:PFAM:PF03413 db_xref GO:0008237 db_xref GO:0008270 db_xref InterPro:IPR005075 4896541 4896852 gene locus_tag Alide2_4658 4896541 4896852 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86960.1||gnl|jgi|Alide2_4658 note KEGG: axy:AXYL_05206 hypothetical protein inference similar to AA sequence:KEGG:AXYL_05206 4896886 4898268 gene locus_tag Alide2_4659 4896886 4898268 CDS product Ferric reductase domain protein transmembrane component domain protein transl_table 11 protein_id gb|AEB86961.1||gnl|jgi|Alide2_4659 note PFAM: Flavoprotein transmembrane component; FAD-binding 8~KEGG: dia:Dtpsy_3433 ferric reductase domain protein transmembrane component inference protein motif:PFAM:PF01794 db_xref GO:0005506 db_xref GO:0009055 db_xref GO:0016491 db_xref GO:0050660 db_xref InterPro:IPR013112 db_xref InterPro:IPR013130 4898344 4898898 gene locus_tag Alide2_4660 4898344 4898898 CDS product Cytochrome b/b6 domain protein transl_table 11 protein_id gb|AEB86962.1||gnl|jgi|Alide2_4660 note PFAM: Cytochrome b/b6, N-terminal~KEGG: pag:PLES_43981 cytochrome b561 inference protein motif:PFAM:PF00033 db_xref GO:0009055 db_xref GO:0016491 db_xref InterPro:IPR005797 4898947 4899315 gene locus_tag Alide2_4661 4898947 4899315 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86963.1||gnl|jgi|Alide2_4661 note KEGG: dia:Dtpsy_3434 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_3434 4899338 4899817 gene locus_tag Alide2_4662 4899338 4899817 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86964.1||gnl|jgi|Alide2_4662 note KEGG: ajs:Ajs_4087 hypothetical protein inference similar to AA sequence:KEGG:Ajs_4087 4899814 4902024 gene locus_tag Alide2_4663 4899814 4902024 CDS product oxidoreductase FAD/NAD(P)-binding domain protein transl_table 11 protein_id gb|AEB86965.1||gnl|jgi|Alide2_4663 note PFAM: Oxidoreductase FAD/NAD(P)-binding; Flavodoxin/nitric oxide synthase; PepSY-associated TM helix; Oxidoreductase, FAD-binding domain~KEGG: ajs:Ajs_4088 oxidoreductase FAD/NAD(P)-binding subunit inference protein motif:PFAM:PF00175 db_xref GO:0010181 db_xref GO:0016491 db_xref InterPro:IPR001433 db_xref InterPro:IPR005625 db_xref InterPro:IPR008254 db_xref InterPro:IPR008333 4902005 4902982 gene locus_tag Alide2_4664 4902005 4902982 CDS product ApbE family lipoprotein transl_table 11 protein_id gb|AEB86966.1||gnl|jgi|Alide2_4664 note PFAM: Thiamine synthesis ApbE/UPF0280~KEGG: dia:Dtpsy_3437 ApbE family lipoprotein inference protein motif:PFAM:PF02424 db_xref InterPro:IPR003374 4903084 4903389 gene locus_tag Alide2_4665 4903084 4903389 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86967.1||gnl|jgi|Alide2_4665 note KEGG: ajs:Ajs_4090 hypothetical protein inference similar to AA sequence:KEGG:Ajs_4090 4903872 4903405 gene locus_tag Alide2_4666 4903872 4903405 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86968.1||gnl|jgi|Alide2_4666 note KEGG: ajs:Ajs_4091 hypothetical protein inference similar to AA sequence:KEGG:Ajs_4091 4903944 4906493 gene locus_tag Alide2_4667 4903944 4906493 CDS product ATPase, P-type (transporting), HAD superfamily, subfamily IC EC_number 3.6.3.8 transl_table 11 protein_id gb|AEB86969.1||gnl|jgi|Alide2_4667 note SMART: ATPase, P-type cation-transporter, N-terminal~TIGRFAM: ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter~KEGG: dia:Dtpsy_3444 ATPase, P-type (transporting), HAD superfamily, subfamily IC~PFAM: ATPase, P-type, ATPase-associated domain; ATPase, P-type cation-transporter, N-terminal; Haloacid dehalogenase-like hydrolase; ATPase, P-type cation-transporter, C-terminal inference protein motif:TFAM:TIGR01494 db_xref GO:0005524 db_xref InterPro:IPR001757 db_xref InterPro:IPR004014 db_xref InterPro:IPR005834 db_xref InterPro:IPR006068 db_xref InterPro:IPR008250 4907159 4907299 gene locus_tag Alide2_4668 4907159 4907299 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86970.1||gnl|jgi|Alide2_4668 inference ab initio prediction:Prodigal:1.4 4907414 4907906 gene locus_tag Alide2_4669 pseudo 4909078 4907984 gene locus_tag Alide2_4670 4909078 4907984 CDS product 2-nitropropane dioxygenase NPD transl_table 11 protein_id gb|AEB86971.1||gnl|jgi|Alide2_4670 note PFAM: 2-nitropropane dioxygenase, NPD~KEGG: bpt:Bpet0267 hypothetical protein inference protein motif:PFAM:PF03060 db_xref GO:0018580 db_xref InterPro:IPR004136 4910051 4909080 gene locus_tag Alide2_4671 4910051 4909080 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86972.1||gnl|jgi|Alide2_4671 note KEGG: bpt:Bpetpseudo_01 hypothetical protein inference similar to AA sequence:KEGG:Bpetpseudo_01 db_xref InterPro:IPR005064 4911235 4910081 gene locus_tag Alide2_4672 4911235 4910081 CDS product Butyryl-CoA dehydrogenase EC_number 1.3.8.1 transl_table 11 protein_id gb|AEB86973.1||gnl|jgi|Alide2_4672 note KEGG: bpt:Bpet0266 acyl-CoA dehydrogenase~PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal inference protein motif:PRIAM:1.3.99.2 db_xref InterPro:IPR006090 db_xref InterPro:IPR006091 db_xref InterPro:IPR006092 4912063 4911254 gene locus_tag Alide2_4673 4912063 4911254 CDS product transcriptional regulator, IclR family transl_table 11 protein_id gb|AEB86974.1||gnl|jgi|Alide2_4673 note KEGG: bpt:Bpet0265 IclR family transcriptional regulator~PFAM: Transcription regulator IclR, N-terminal; Transcription regulator IclR, C-terminal~SMART: Transcription regulator IclR, N-terminal inference protein motif:PFAM:PF09339 db_xref GO:0003677 db_xref InterPro:IPR005471 db_xref InterPro:IPR014757 4912253 4913593 gene locus_tag Alide2_4674 4912253 4913593 CDS product Formyl-CoA transferase EC_number 2.8.3.16 transl_table 11 protein_id gb|AEB86975.1||gnl|jgi|Alide2_4674 note KEGG: bpt:Bpet0264 acyl_CoA transferase/carnitine dehydratase~PFAM: CoA-transferase family III inference protein motif:PRIAM:2.8.3.16 db_xref InterPro:IPR003673 4913611 4914612 gene locus_tag Alide2_4675 4913611 4914612 CDS product quinone oxidoreductase, YhdH/YhfP family transl_table 11 protein_id gb|AEB86976.1||gnl|jgi|Alide2_4675 note TIGRFAM: Quinone oxidoreductase putative, YhdH/YhfP~PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, C-terminal~KEGG: bpt:Bpet0263 alcohol dehydrogenase III~SMART: Polyketide synthase, enoylreductase inference protein motif:TFAM:TIGR02823 db_xref InterPro:IPR013149 db_xref InterPro:IPR013154 db_xref InterPro:IPR014188 db_xref InterPro:IPR020843 4914653 4914824 gene locus_tag Alide2_4676 pseudo 4916074 4914842 gene locus_tag Alide2_4677 4916074 4914842 CDS product Acyl-CoA dehydrogenase EC_number 1.3.99.3 transl_table 11 protein_id gb|AEB86977.1||gnl|jgi|Alide2_4677 note KEGG: sth:STH2463 acyl-CoA dehydrogenase, short-chain specific~PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal inference protein motif:PRIAM:1.3.99.3 db_xref InterPro:IPR006090 db_xref InterPro:IPR006091 db_xref InterPro:IPR006092 4917074 4916088 gene locus_tag Alide2_4678 4917074 4916088 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86978.1||gnl|jgi|Alide2_4678 note KEGG: bpt:Bpetpseudo_01 hypothetical protein inference similar to AA sequence:KEGG:Bpetpseudo_01 db_xref InterPro:IPR005064 4917972 4917112 gene locus_tag Alide2_4679 4917972 4917112 CDS product transcriptional regulator, IclR family transl_table 11 protein_id gb|AEB86979.1||gnl|jgi|Alide2_4679 note KEGG: bpt:Bpet0265 IclR family transcriptional regulator~PFAM: Transcription regulator IclR, N-terminal; Transcription regulator IclR, C-terminal~SMART: Transcription regulator IclR, N-terminal inference protein motif:PFAM:PF09339 db_xref GO:0003677 db_xref InterPro:IPR005471 db_xref InterPro:IPR014757 4918057 4919292 gene locus_tag Alide2_4680 4918057 4919292 CDS product Formyl-CoA transferase EC_number 2.8.3.16 transl_table 11 protein_id gb|AEB86980.1||gnl|jgi|Alide2_4680 note KEGG: bpt:Bpet0264 acyl_CoA transferase/carnitine dehydratase~PFAM: CoA-transferase family III inference protein motif:PRIAM:2.8.3.16 db_xref InterPro:IPR003673 4920230 4919289 gene locus_tag Alide2_4681 4920230 4919289 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB86981.1||gnl|jgi|Alide2_4681 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: vei:Veis_4196 LysR family transcriptional regulator inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 4920337 4921323 gene locus_tag Alide2_4682 4920337 4921323 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86982.1||gnl|jgi|Alide2_4682 note KEGG: vap:Vapar_1641 hypothetical protein inference similar to AA sequence:KEGG:Vapar_1641 db_xref InterPro:IPR005064 4921335 4922954 gene locus_tag Alide2_4683 4921335 4922954 CDS product gamma-glutamyltransferase EC_number 2.3.2.2 transl_table 11 protein_id gb|AEB86983.1||gnl|jgi|Alide2_4683 note TIGRFAM: Gamma-glutamyltranspeptidase~KEGG: vap:Vapar_1640 gamma-glutamyltransferase~PFAM: Gamma-glutamyltranspeptidase inference protein motif:TFAM:TIGR00066 db_xref GO:0003840 db_xref InterPro:IPR000101 4923632 4922970 gene locus_tag Alide2_4684 4923632 4922970 CDS product hypothetical protein transl_table 11 protein_id gb|AEB86984.1||gnl|jgi|Alide2_4684 inference ab initio prediction:Prodigal:1.4 4925452 4923785 gene locus_tag Alide2_4685 4925452 4923785 CDS product fumarate reductase/succinate dehydrogenase flavoprotein domain protein transl_table 11 protein_id gb|AEB86985.1||gnl|jgi|Alide2_4685 note PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal~KEGG: ajs:Ajs_4093 twin-arginine translocation pathway signal inference protein motif:PFAM:PF00890 db_xref GO:0009055 db_xref GO:0016491 db_xref InterPro:IPR003953 4927005 4925452 gene locus_tag Alide2_4686 4927005 4925452 CDS product Spermidine synthase EC_number 2.5.1.16 transl_table 11 protein_id gb|AEB86986.1||gnl|jgi|Alide2_4686 note HAMAP: Spermine synthase~KEGG: dia:Dtpsy_3446 spermidine synthase~PFAM: Spermine synthase inference protein motif:HAMAP:MF_00198 db_xref InterPro:IPR001045 4927240 4927019 gene locus_tag Alide2_4687 4927240 4927019 CDS product protein of unknown function DUF350 transl_table 11 protein_id gb|AEB86987.1||gnl|jgi|Alide2_4687 note PFAM: Protein of unknown function DUF350~KEGG: dia:Dtpsy_3447 protein of unknown function DUF350 inference protein motif:PFAM:PF03994 db_xref InterPro:IPR007140 4928761 4927277 gene locus_tag Alide2_4688 4928761 4927277 CDS product putative transmembrane protein transl_table 11 protein_id gb|AEB86988.1||gnl|jgi|Alide2_4688 note KEGG: dia:Dtpsy_3448 putative transmembrane protein inference similar to AA sequence:KEGG:Dtpsy_3448 4929867 4928830 gene locus_tag Alide2_4689 4929867 4928830 CDS product band 7 protein transl_table 11 protein_id gb|AEB86989.1||gnl|jgi|Alide2_4689 note PFAM: Band 7 protein~KEGG: ajs:Ajs_4099 putative transmembrane protein inference protein motif:PFAM:PF01145 db_xref InterPro:IPR001107 4930036 4930344 gene locus_tag Alide2_4690 4930036 4930344 CDS product Protein of unknown function DUF2061, membrane transl_table 11 protein_id gb|AEB86990.1||gnl|jgi|Alide2_4690 note PFAM: Protein of unknown function DUF2061, membrane~KEGG: dia:Dtpsy_3450 hypothetical protein inference protein motif:PFAM:PF09834 db_xref InterPro:IPR018638 4930589 4930266 gene locus_tag Alide2_4691 4930589 4930266 CDS product flagellar basal body rod protein transl_table 11 protein_id gb|AEB86991.1||gnl|jgi|Alide2_4691 note PFAM: Flagellar basal body rod protein, N-terminal; Domain of unknown function DUF1078, C-terminal~KEGG: dia:Dtpsy_3453 flagellar basal body rod protein inference protein motif:PFAM:PF00460 db_xref GO:0003774 db_xref GO:0005198 db_xref InterPro:IPR001444 db_xref InterPro:IPR010930 4931595 4930651 gene locus_tag Alide2_4692 4931595 4930651 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB86992.1||gnl|jgi|Alide2_4692 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: dia:Dtpsy_3454 transcriptional regulator, LysR family inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 4931687 4933042 gene locus_tag Alide2_4693 4931687 4933042 CDS product Beta-alanine--pyruvate transaminase EC_number 2.6.1.18 transl_table 11 protein_id gb|AEB86993.1||gnl|jgi|Alide2_4693 note KEGG: xtr:100492879 omega-amino acid--pyruvate aminotransferase-like~PFAM: Aminotransferase class-III inference protein motif:PRIAM:2.6.1.18 db_xref InterPro:IPR005814 4933112 4934629 gene locus_tag Alide2_4694 4933112 4934629 CDS product methylmalonate-semialdehyde dehydrogenase EC_number 1.2.1.27 transl_table 11 protein_id gb|AEB86994.1||gnl|jgi|Alide2_4694 note TIGRFAM: Methylmalonate-semialdehyde dehydrogenase~KEGG: dia:Dtpsy_3456 methylmalonate-semialdehyde dehydrogenase~PFAM: Aldehyde dehydrogenase domain inference protein motif:TFAM:TIGR01722 db_xref GO:0004491 db_xref InterPro:IPR010061 db_xref InterPro:IPR015590 4934721 4935854 gene locus_tag Alide2_4695 4934721 4935854 CDS product diguanylate cyclase transl_table 11 protein_id gb|AEB86995.1||gnl|jgi|Alide2_4695 note TIGRFAM: Diguanylate cyclase, predicted~PFAM: Diguanylate cyclase, predicted; MASE2~KEGG: aav:Aave_4748 diguanylate cyclase~SMART: Diguanylate cyclase, predicted inference protein motif:TFAM:TIGR00254 db_xref InterPro:IPR000160 db_xref InterPro:IPR007894 4936706 4935867 gene locus_tag Alide2_4696 4936706 4935867 CDS product GntR domain protein transl_table 11 protein_id gb|AEB86996.1||gnl|jgi|Alide2_4696 note KEGG: dia:Dtpsy_3457 GntR domain protein~PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR~SMART: GntR, C-terminal; HTH transcriptional regulator, GntR inference protein motif:PFAM:PF07729 db_xref GO:0003700 db_xref InterPro:IPR000524 db_xref InterPro:IPR011711 4936928 4938133 gene locus_tag Alide2_4697 4936928 4938133 CDS product extracellular ligand-binding receptor transl_table 11 protein_id gb|AEB86997.1||gnl|jgi|Alide2_4697 note KEGG: dia:Dtpsy_3458 extracellular ligand-binding receptor inference similar to AA sequence:KEGG:Dtpsy_3458 db_xref InterPro:IPR006311 4938168 4939028 gene locus_tag Alide2_4698 4938168 4939028 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB86998.1||gnl|jgi|Alide2_4698 note PFAM: ABC transporter permease~KEGG: dia:Dtpsy_3459 inner-membrane translocator inference protein motif:PFAM:PF02653 db_xref GO:0005215 db_xref InterPro:IPR001851 4939034 4940029 gene locus_tag Alide2_4699 4939034 4940029 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB86999.1||gnl|jgi|Alide2_4699 note PFAM: ABC transporter permease~KEGG: dac:Daci_6025 inner-membrane translocator inference protein motif:PFAM:PF02653 db_xref GO:0005215 db_xref InterPro:IPR001851 4940026 4940808 gene locus_tag Alide2_4700 4940026 4940808 CDS product Monosaccharide-transporting ATPase EC_number 3.6.3.17 transl_table 11 protein_id gb|AEB87000.1||gnl|jgi|Alide2_4700 note PFAM: ABC transporter-like~KEGG: dia:Dtpsy_3461 ABC transporter related~SMART: ATPase, AAA+ type, core inference protein motif:PRIAM:3.6.3.17 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 4940805 4941581 gene locus_tag Alide2_4701 4940805 4941581 CDS product ABC transporter related protein transl_table 11 protein_id gb|AEB87001.1||gnl|jgi|Alide2_4701 note KEGG: dac:Daci_6027 ABC transporter-like protein~PFAM: ABC transporter-like~SMART: ATPase, AAA+ type, core inference protein motif:PFAM:PF00005 db_xref GO:0005524 db_xref GO:0016887 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 4941595 4942851 gene locus_tag Alide2_4702 4941595 4942851 CDS product amidase, hydantoinase/carbamoylase family EC_number 3.5.1.87 transl_table 11 protein_id gb|AEB87002.1||gnl|jgi|Alide2_4702 note TIGRFAM: Amidase, hydantoinase/carbamoylase~KEGG: dia:Dtpsy_3463 amidase, hydantoinase/carbamoylase family~PFAM: Peptidase M20; Peptidase M20, dimerisation inference protein motif:TFAM:TIGR01879 db_xref GO:0003840 db_xref InterPro:IPR002933 db_xref InterPro:IPR010158 db_xref InterPro:IPR011650 4942848 4944314 gene locus_tag Alide2_4703 4942848 4944314 CDS product Microcystin LR degradation protein MlrC transl_table 11 protein_id gb|AEB87003.1||gnl|jgi|Alide2_4703 note PFAM: Microcystin LR degradation protein MlrC, N-terminal; Microcystin LR degradation protein MlrC, C-terminal~KEGG: dia:Dtpsy_3464 microcystin LR degradation protein MlrC-like protein inference protein motif:PFAM:PF07364 db_xref InterPro:IPR010799 db_xref InterPro:IPR015995 4944462 4946771 gene locus_tag Alide2_4704 4944462 4946771 CDS product phosphate acetyl/butaryl transferase transl_table 11 protein_id gb|AEB87004.1||gnl|jgi|Alide2_4704 note KEGG: dia:Dtpsy_3465 malic enzyme~PFAM: Phosphate acetyl/butaryl transferase; Malic enzyme, NAD-binding; Malic enzyme, N-terminal~SMART: Malic enzyme, NAD-binding inference protein motif:PFAM:PF01515 db_xref GO:0008415 db_xref GO:0051287 db_xref InterPro:IPR002505 db_xref InterPro:IPR012301 db_xref InterPro:IPR012302 4946905 4947309 gene locus_tag Alide2_4705 4946905 4947309 CDS product guanine-specific ribonuclease N1 and T1 transl_table 11 protein_id gb|AEB87005.1||gnl|jgi|Alide2_4705 note PFAM: Guanine-specific ribonuclease N1/T1~KEGG: dia:Dtpsy_3466 guanine-specific ribonuclease N1 and T1 inference protein motif:PFAM:PF00545 db_xref GO:0003723 db_xref GO:0004521 db_xref InterPro:IPR000026 4947450 4947875 gene locus_tag Alide2_4706 4947450 4947875 CDS product Barstar (barnase inhibitor) transl_table 11 protein_id gb|AEB87006.1||gnl|jgi|Alide2_4706 note PFAM: Barstar (barnase inhibitor)~KEGG: dia:Dtpsy_3467 barstar (barnase inhibitor) inference protein motif:PFAM:PF01337 db_xref InterPro:IPR000468 4948872 4948105 gene locus_tag Alide2_4707 4948872 4948105 CDS product dimethyladenosine transferase transl_table 11 protein_id gb|AEB87007.1||gnl|jgi|Alide2_4707 note TIGRFAM: Ribosomal RNA adenine dimethylase~PFAM: Ribosomal RNA adenine methylase transferase~KEGG: dia:Dtpsy_3468 dimethyladenosine transferase~SMART: Ribosomal RNA adenine methylase transferase, N-terminal inference protein motif:TFAM:TIGR00755 db_xref GO:0016433 db_xref InterPro:IPR001737 db_xref InterPro:IPR011530 db_xref InterPro:IPR020598 4950284 4948869 gene locus_tag Alide2_4708 4950284 4948869 CDS product Chaperone surA transl_table 11 protein_id gb|AEB87008.1||gnl|jgi|Alide2_4708 note KEGG: dia:Dtpsy_3469 SurA domain protein~HAMAP: Peptidyl-prolyl isomerase SurA~PFAM: SurA N-terminal; Peptidyl-prolyl cis-trans isomerase, PpiC-type inference protein motif:HAMAP:MF_01183 db_xref InterPro:IPR000297 db_xref InterPro:IPR015391 db_xref InterPro:IPR023034 4952762 4950318 gene locus_tag Alide2_4709 4952762 4950318 CDS product LPS-assembly protein lptD transl_table 11 protein_id gb|AEB87009.1||gnl|jgi|Alide2_4709 note KEGG: dia:Dtpsy_3470 organic solvent tolerance protein~HAMAP: Lipopolysccharide assembly, LptD~PFAM: Organic solvent tolerance protein, C-terminal inference protein motif:HAMAP:MF_01411 db_xref InterPro:IPR007543 db_xref InterPro:IPR020889 4952836 4953951 gene locus_tag Alide2_4710 4952836 4953951 CDS product aminoglycoside phosphotransferase transl_table 11 protein_id gb|AEB87010.1||gnl|jgi|Alide2_4710 note PFAM: Aminoglycoside phosphotransferase~KEGG: ajs:Ajs_4113 aminoglycoside phosphotransferase inference protein motif:PFAM:PF01636 db_xref InterPro:IPR002575 4954019 4954732 gene locus_tag Alide2_4711 4954019 4954732 CDS product Ribosomal RNA small subunit methyltransferase E transl_table 11 protein_id gb|AEB87011.1||gnl|jgi|Alide2_4711 note KEGG: dia:Dtpsy_3472 16S ribosomal RNA methyltransferase RsmE~TIGRFAM: Ribosomal RNA small subunit methyltransferase E~PFAM: Ribosomal RNA small subunit methyltransferase E inference protein motif:TFAM:TIGR00046 db_xref GO:0008168 db_xref InterPro:IPR006700 4954732 4956066 gene locus_tag Alide2_4712 4954732 4956066 CDS product hypothetical protein transl_table 11 protein_id gb|AEB87012.1||gnl|jgi|Alide2_4712 note KEGG: dia:Dtpsy_3473 hypothetical protein inference similar to AA sequence:KEGG:Dtpsy_3473 4956059 4956763 gene locus_tag Alide2_4713 4956059 4956763 CDS product hypothetical protein transl_table 11 protein_id gb|AEB87013.1||gnl|jgi|Alide2_4713 note KEGG: ajs:Ajs_4116 hypothetical protein inference similar to AA sequence:KEGG:Ajs_4116 4956764 4959601 gene locus_tag Alide2_4714 4956764 4959601 CDS product SMC domain protein transl_table 11 protein_id gb|AEB87014.1||gnl|jgi|Alide2_4714 note PFAM: RecF/RecN/SMC~KEGG: dia:Dtpsy_3475 SMC domain protein inference protein motif:PFAM:PF02463 db_xref GO:0005524 db_xref InterPro:IPR003395 4961137 4959674 gene locus_tag Alide2_4715 4961137 4959674 CDS product peptidase M20 transl_table 11 protein_id gb|AEB87015.1||gnl|jgi|Alide2_4715 note PFAM: Peptidase M20; Peptidase M20, dimerisation~KEGG: dia:Dtpsy_3479 peptidase M20 inference protein motif:PFAM:PF01546 db_xref GO:0005515 db_xref GO:0016787 db_xref InterPro:IPR002933 db_xref InterPro:IPR011650 4962398 4961211 gene locus_tag Alide2_4716 4962398 4961211 CDS product diguanylate cyclase transl_table 11 protein_id gb|AEB87016.1||gnl|jgi|Alide2_4716 note TIGRFAM: Diguanylate cyclase, predicted~PFAM: Diguanylate cyclase, predicted~KEGG: dia:Dtpsy_3480 diguanylate cyclase~SMART: Diguanylate cyclase, predicted inference protein motif:TFAM:TIGR00254 db_xref InterPro:IPR000160 4963192 4962608 gene locus_tag Alide2_4717 4963192 4962608 CDS product methionine biosynthesis protein MetW transl_table 11 protein_id gb|AEB87017.1||gnl|jgi|Alide2_4717 note KEGG: dia:Dtpsy_3482 methionine biosynthesis protein MetW~TIGRFAM: Methionine biosynthesis MetW~PFAM: Methionine biosynthesis MetW inference protein motif:TFAM:TIGR02081 db_xref InterPro:IPR010743 4964319 4963189 gene locus_tag Alide2_4718 4964319 4963189 CDS product homoserine O-acetyltransferase EC_number 2.3.1.31 transl_table 11 protein_id gb|AEB87018.1||gnl|jgi|Alide2_4718 note TIGRFAM: Homoserine acetyltransferase~KEGG: ajs:Ajs_4125 homoserine O-acetyltransferase~PFAM: Alpha/beta hydrolase fold-1 inference protein motif:TFAM:TIGR01392 db_xref GO:0016413 db_xref InterPro:IPR000073 db_xref InterPro:IPR008220 4965030 4964452 gene locus_tag Alide2_4719 4965030 4964452 CDS product protein of unknown function UPF0016 transl_table 11 protein_id gb|AEB87019.1||gnl|jgi|Alide2_4719 note PFAM: Uncharacterised protein family UPF0016~KEGG: dia:Dtpsy_3484 protein of unknown function UPF0016 inference protein motif:PFAM:PF01169 db_xref InterPro:IPR001727 4965502 4965852 gene locus_tag Alide2_4720 4965502 4965852 CDS product RNP-1 like RNA-binding protein transl_table 11 protein_id gb|AEB87020.1||gnl|jgi|Alide2_4720 note KEGG: dia:Dtpsy_3485 RNP-1 like RNA-binding protein~PFAM: RNA recognition motif domain~SMART: RNA recognition motif domain inference protein motif:PFAM:PF00076 db_xref GO:0003676 db_xref InterPro:IPR000504 4966088 4966522 gene locus_tag Alide2_4721 4966088 4966522 CDS product RNP-1 like RNA-binding protein transl_table 11 protein_id gb|AEB87021.1||gnl|jgi|Alide2_4721 note KEGG: ajs:Ajs_4128 RNP-1 like RNA-binding protein~PFAM: RNA recognition motif domain~SMART: RNA recognition motif domain inference protein motif:PFAM:PF00076 db_xref GO:0003676 db_xref InterPro:IPR000504 4967403 4966609 gene locus_tag Alide2_4722 4967403 4966609 CDS product short-chain dehydrogenase/reductase SDR transl_table 11 protein_id gb|AEB87022.1||gnl|jgi|Alide2_4722 note PFAM: Short-chain dehydrogenase/reductase SDR~KEGG: ajs:Ajs_4129 short chain dehydrogenase inference protein motif:PFAM:PF00106 db_xref GO:0016491 db_xref InterPro:IPR002198 4968055 4967414 gene locus_tag Alide2_4723 4968055 4967414 CDS product protein of unknown function DUF1239 transl_table 11 protein_id gb|AEB87023.1||gnl|jgi|Alide2_4723 note PFAM: Lipopolysccharide assembly, LptC-related~KEGG: dia:Dtpsy_3488 protein of unknown function DUF1239 inference protein motif:PFAM:PF06835 db_xref InterPro:IPR010664 4968624 4968052 gene locus_tag Alide2_4724 4968624 4968052 CDS product 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family EC_number 3.1.3.45 transl_table 11 protein_id gb|AEB87024.1||gnl|jgi|Alide2_4724 note TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase~KEGG: dia:Dtpsy_3489 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family~PFAM: HAD superfamily hydrolase-like, type 3 inference protein motif:TFAM:TIGR01670 db_xref GO:0019143 db_xref InterPro:IPR010023 db_xref InterPro:IPR013200 4969625 4968624 gene locus_tag Alide2_4725 4969625 4968624 CDS product KpsF/GutQ family protein EC_number 5.3.1.13 transl_table 11 protein_id gb|AEB87025.1||gnl|jgi|Alide2_4725 note SMART: Cystathionine beta-synthase, core~TIGRFAM: KpsF/GutQ~KEGG: ajs:Ajs_4132 KpsF/GutQ family protein~PFAM: Sugar isomerase (SIS); Cystathionine beta-synthase, core inference protein motif:TFAM:TIGR00393 db_xref GO:0016853 db_xref InterPro:IPR000644 db_xref InterPro:IPR001347 db_xref InterPro:IPR004800 4969674 4971659 gene locus_tag Alide2_4726 4969674 4971659 CDS product sodium/hydrogen exchanger transl_table 11 protein_id gb|AEB87026.1||gnl|jgi|Alide2_4726 note PFAM: Cation/H+ exchanger; Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal~KEGG: ajs:Ajs_4133 potassium efflux system protein inference protein motif:PFAM:PF00999 db_xref GO:0008324 db_xref GO:0015299 db_xref InterPro:IPR003148 db_xref InterPro:IPR006037 db_xref InterPro:IPR006153 4971697 4972251 gene locus_tag Alide2_4727 4971697 4972251 CDS product Adenine phosphoribosyltransferase transl_table 11 protein_id gb|AEB87027.1||gnl|jgi|Alide2_4727 note TIGRFAM: Adenine phosphoribosyl transferase~HAMAP: Adenine phosphoribosyl transferase~KEGG: dia:Dtpsy_3492 adenine phosphoribosyltransferase~PFAM: Phosphoribosyltransferase inference protein motif:HAMAP:MF_00004 db_xref InterPro:IPR000836 db_xref InterPro:IPR005764 4973185 4972298 gene locus_tag Alide2_4728 4973185 4972298 CDS product hypothetical protein transl_table 11 protein_id gb|AEB87028.1||gnl|jgi|Alide2_4728 note KEGG: ajs:Ajs_4136 hypothetical protein inference similar to AA sequence:KEGG:Ajs_4136 4973793 4973308 gene locus_tag Alide2_4729 4973793 4973308 CDS product putative transcriptional regulator, Crp/Fnr family transl_table 11 protein_id gb|AEB87029.1||gnl|jgi|Alide2_4729 note KEGG: dia:Dtpsy_3494 cyclic nucleotide-binding protein~PFAM: Cyclic nucleotide-binding domain~SMART: Cyclic nucleotide-binding domain inference protein motif:PFAM:PF00027 db_xref InterPro:IPR000595 4975273 4973876 gene locus_tag Alide2_4730 4975273 4973876 CDS product tRNA modification GTPase mnmE transl_table 11 protein_id gb|AEB87030.1||gnl|jgi|Alide2_4730 note TIGRFAM: tRNA modification GTPase TrmE; Small GTP-binding protein~HAMAP: tRNA modification GTPase TrmE~KEGG: ajs:Ajs_4138 tRNA modification GTPase TrmE~PFAM: GTP-binding protein TrmE, N-terminal; GTP-binding protein, HSR1-related inference protein motif:HAMAP:MF_00379 db_xref InterPro:IPR002917 db_xref InterPro:IPR004520 db_xref InterPro:IPR005225 db_xref InterPro:IPR018948 4976238 4975351 gene locus_tag Alide2_4731 4976238 4975351 CDS product ABC-type transporter, periplasmic subunit family 3 transl_table 11 protein_id gb|AEB87031.1||gnl|jgi|Alide2_4731 note KEGG: aav:Aave_1937 extracellular solute-binding protein~PFAM: Extracellular solute-binding protein, family 3~SMART: Extracellular solute-binding protein, family 3 inference protein motif:PFAM:PF00497 db_xref GO:0005215 db_xref InterPro:IPR001638 4976508 4977704 gene locus_tag Alide2_4732 4976508 4977704 CDS product D-amino-acid dehydrogenase EC_number 1.4.99.1 transl_table 11 protein_id gb|AEB87032.1||gnl|jgi|Alide2_4732 note KEGG: vap:Vapar_1545 D-amino-acid dehydrogenase~PFAM: FAD dependent oxidoreductase inference protein motif:PRIAM:1.4.99.1 db_xref InterPro:IPR006076 4978613 4977708 gene locus_tag Alide2_4733 4978613 4977708 CDS product transcriptional regulator, LysR family transl_table 11 protein_id gb|AEB87033.1||gnl|jgi|Alide2_4733 note PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR~KEGG: aav:Aave_1935 LysR family transcriptional regulator inference protein motif:PFAM:PF03466 db_xref GO:0003700 db_xref InterPro:IPR000847 db_xref InterPro:IPR005119 4979382 4978642 gene locus_tag Alide2_4734 4979382 4978642 CDS product aspartate racemase transl_table 11 protein_id gb|AEB87034.1||gnl|jgi|Alide2_4734 note KEGG: aav:Aave_1663 aspartate racemase~TIGRFAM: Aspartate racemase~PFAM: Asp/Glu/hydantoin racemase inference protein motif:TFAM:TIGR00035 db_xref GO:0005525 db_xref InterPro:IPR004380 db_xref InterPro:IPR015942 4980197 4979379 gene locus_tag Alide2_4735 4980197 4979379 CDS product peptidase M55 D-aminopeptidase transl_table 11 protein_id gb|AEB87035.1||gnl|jgi|Alide2_4735 note PFAM: Peptidase M55, D-aminopeptidase~KEGG: aav:Aave_1662 D-aminopeptidase DppA inference protein motif:PFAM:PF04951 db_xref InterPro:IPR007035 4981299 4980262 gene locus_tag Alide2_4736 4981299 4980262 CDS product peptidase S58 DmpA transl_table 11 protein_id gb|AEB87036.1||gnl|jgi|Alide2_4736 note PFAM: Peptidase S58, DmpA~KEGG: aav:Aave_1661 aminopeptidase DmpA inference protein motif:PFAM:PF03576 db_xref InterPro:IPR005321 4982204 4981296 gene locus_tag Alide2_4737 4982204 4981296 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB87037.1||gnl|jgi|Alide2_4737 note PFAM: Binding-protein-dependent transport systems inner membrane component~KEGG: aav:Aave_1660 binding-protein-dependent transport systems inner membrane component inference protein motif:PFAM:PF00528 db_xref GO:0005215 db_xref InterPro:IPR000515 4983132 4982212 gene locus_tag Alide2_4738 4983132 4982212 CDS product ABC-type transporter, integral membrane subunit transl_table 11 protein_id gb|AEB87038.1||gnl|jgi|Alide2_4738 note PFAM: Binding-protein-dependent transport systems inner membrane component~KEGG: aav:Aave_1659 binding-protein-dependent transport systems inner membrane component inference protein motif:PFAM:PF00528 db_xref GO:0005215 db_xref InterPro:IPR000515 4984745 4983201 gene locus_tag Alide2_4739 4984745 4983201 CDS product ABC-type transporter, periplasmic subunit transl_table 11 protein_id gb|AEB87039.1||gnl|jgi|Alide2_4739 note PFAM: Bacterial extracellular solute-binding protein, family 5~KEGG: aav:Aave_1658 extracellular solute-binding protein inference protein motif:PFAM:PF00496 db_xref GO:0005215 db_xref InterPro:IPR000914 4986711 4984837 gene locus_tag Alide2_4740 4986711 4984837 CDS product oligopeptide/dipeptide ABC transporter, ATPase subunit transl_table 11 protein_id gb|AEB87040.1||gnl|jgi|Alide2_4740 note TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal~PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal~KEGG: aav:Aave_1657 oligopeptide/dipeptide ABC transporter, ATPase subunit~SMART: ATPase, AAA+ type, core inference protein motif:TFAM:TIGR01727 db_xref GO:0005524 db_xref GO:0015197 db_xref InterPro:IPR003439 db_xref InterPro:IPR003593 db_xref InterPro:IPR010066 db_xref InterPro:IPR013563 4987726 4986728 gene locus_tag Alide2_4741 4987726 4986728 CDS product Beta-aspartyl-peptidase EC_number 3.4.19.5 transl_table 11 protein_id gb|AEB87041.1||gnl|jgi|Alide2_4741 note KEGG: aav:Aave_1656 asparaginase~PFAM: Peptidase T2, asparaginase 2 inference protein motif:PRIAM:3.4.19.5 db_xref InterPro:IPR000246 4988655 4987723 gene locus_tag Alide2_4742 4988655 4987723 CDS product transcriptional regulator, RpiR family transl_table 11 protein_id gb|AEB87042.1||gnl|jgi|Alide2_4742 note PFAM: Sugar isomerase (SIS); Helix-turn-helix protein RpiR~KEGG: aav:Aave_1655 RpiR family transcriptional regulator inference protein motif:PFAM:PF01380 db_xref GO:0003700 db_xref GO:0005529 db_xref InterPro:IPR000281 db_xref InterPro:IPR001347 4989524 4988866 gene locus_tag Alide2_4743 pseudo 4990362 4989520 gene locus_tag Alide2_4744 pseudo 4992361 4990775 gene locus_tag Alide2_4745 4992361 4990775 CDS product ABC-type transporter, periplasmic subunit transl_table 11 protein_id gb|AEB87043.1||gnl|jgi|Alide2_4745 note PFAM: Bacterial extracellular solute-binding protein, family 5~KEGG: ajs:Ajs_4139 extracellular solute-binding protein inference protein motif:PFAM:PF00496 db_xref GO:0005215 db_xref InterPro:IPR000914 4994163 4992469 gene locus_tag Alide2_4746 4994163 4992469 CDS product membrane protein insertase, YidC/Oxa1 family domain containing transl_table 11 protein_id gb|AEB87044.1||gnl|jgi|Alide2_4746 note KEGG: dia:Dtpsy_3542 YidC translocase/secretase~TIGRFAM: Membrane insertion protein, OxaA/YidC, bacterial; Membrane insertion protein, OxaA/YidC~PFAM: Membrane insertion protein, OxaA/YidC inference protein motif:TFAM:TIGR03593 db_xref InterPro:IPR001708 db_xref InterPro:IPR019998 4994453 4994160 gene locus_tag Alide2_4747 4994453 4994160 CDS product protein of unknown function DUF37 transl_table 11 protein_id gb|AEB87045.1||gnl|jgi|Alide2_4747 note KEGG: ajs:Ajs_4141 hypothetical protein~TIGRFAM: Protein of unknown function DUF37~PFAM: Protein of unknown function DUF37 inference protein motif:TFAM:TIGR00278 db_xref InterPro:IPR002696 4994890 4994450 gene locus_tag Alide2_4748 4994890 4994450 CDS product ribonuclease P protein transl_table 11 protein_id gb|AEB87046.1||gnl|jgi|Alide2_4748 note PFAM: Ribonuclease P~KEGG: dia:Dtpsy_3544 hypothetical protein inference protein motif:PFAM:PF00825 db_xref GO:0000049 db_xref GO:0004526 db_xref InterPro:IPR000100 4995067 4994933 gene locus_tag Alide2_4749 4995067 4994933 CDS product 50S ribosomal protein L34 transl_table 11 protein_id gb|AEB87047.1||gnl|jgi|Alide2_4749 note TIGRFAM: Ribosomal protein L34~HAMAP: Ribosomal protein L34~KEGG: vei:Veis_5015 50S ribosomal protein L34~PFAM: Ribosomal protein L34 inference protein motif:HAMAP:MF_00391 db_xref InterPro:IPR000271