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# Program: needle
# Rundate: Sun 17 Feb 2008 20:51:21
# Commandline: needle
#    [-asequence] proecoli.fasta
#    [-bsequence] prohol.fasta
#    [-outfile] proalig
# Align_format: srspair
# Report_file: proalig
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#=======================================
#
# Aligned_sequences: 2
# 1: DHAS_ECOLI
# 2: Q9KQG2_VIBCH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 371
# Identity:     242/371 (65.2%)
# Similarity:   295/371 (79.5%)
# Gaps:           5/371 ( 1.3%)
# Score: 1313.0
# 
#
#=======================================

DHAS_ECOLI         1 MKNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGT     50
                      ..||.:|||||||||||||||||||||.|.||||||||:|..||:||..
Q9KQG2_VIBCH       1 -MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAPNFGKD     49

DHAS_ECOLI        51 TGTLQDAFDLEALKALDIIVTCQGGDYTNEIYPKLRESGWQGYWIDAASS    100
                     .|.|.||||:|:||.||.::|||||.||.::||.||::||:||||||||:
Q9KQG2_VIBCH      50 AGMLHDAFDIESLKQLDAVITCQGGSYTEKVYPALRQAGWKGYWIDAAST     99

DHAS_ECOLI       101 LRMKDDAIIILDPVNQDVITDGLNNGIRTFVGGNCTVSLMLMSLGGLFAN    150
                     |||..:|||.|||||...|..|:::|.:||||||||||||||:||||:..
Q9KQG2_VIBCH     100 LRMDKEAIITLDPVNLKQILHGIHHGTKTFVGGNCTVSLMLMALGGLYER    149

DHAS_ECOLI       151 DLVDWVSVATYQAASGGGARHMRELLTQMGHLYGHVADELATPSSAILDI    200
                     .||:|:|..|||||||.||::||||::|||.:...|:.|||.|:|:||||
Q9KQG2_VIBCH     150 GLVEWMSAMTYQAASGAGAQNMRELISQMGVINDAVSSELANPASSILDI    199

DHAS_ECOLI       201 ERKVTTLTRSGELPVDNFGVPLAGSLIPWIDKQLDNGQSREEWKGQAETN    250
                     ::||....|||..|.||||||||||||||||.:.|||||:||||...|.|
Q9KQG2_VIBCH     200 DKKVAETMRSGSFPTDNFGVPLAGSLIPWIDVKRDNGQSKEEWKAGVEAN    249

DHAS_ECOLI       251 KILN-TSSVIPVDGLCVRVGALRCHSQAFTIKLKKDVSIPTVEELLAAHN    299
                     |||. ..|.:|:||.|||:||:||||||.|||||:::.:..:||::|.||
Q9KQG2_VIBCH     250 KILGLQDSPVPIDGTCVRIGAMRCHSQALTIKLKQNIPLDEIEEMIATHN    299

DHAS_ECOLI       300 PWAKVVPNDREITMRELTPAAVTGTLTTPVGRLRKLNMGPEFLSAFTVGD    349
                     .|.||:||:|:||.||||||.|||||:.|||||||:.||.:||:||||||
Q9KQG2_VIBCH     300 DWVKVIPNERDITARELTPAKVTGTLSVPVGRLRKMAMGDDFLNAFTVGD    349

DHAS_ECOLI       350 QLLWGAAEPLRRMLRQLA---    367
                     ||||||||||||.||.:.   
Q9KQG2_VIBCH     350 QLLWGAAEPLRRTLRIILAEK    370


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