FastQCFastQC Report
Сб 3 дек 2016
chr7.fastq

Summary

[OK]Basic Statistics

MeasureValue
Filenamechr7.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3752
Sequences flagged as poor quality0
Sequence length30-100
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGATTATCAAGAGAAAGACCCACCACTTGGAAGCCTCACCAAGGTCTATC50.13326226012793177No Hit
TAGAGGCTGAGAAAGGGAGTCACTCAAACCTTGAATCCCTGTGGCCAGTG40.10660980810234541No Hit
ACGTAGAAAAGGCCGACAGAGTTCTTGCTGCCCACCCGATCCAGATACTT40.10660980810234541No Hit
GATCCAGATACTTCTGCCTGCCTTGAAGTGAAGGCCTCCCACCAAATGCG40.10660980810234541No Hit
GTGGTTGGATAACAAGAAAAATAAAAATATGGTACCTGGGCTGTGGTTTT40.10660980810234541No Hit
AACACGAGAAATGAAACATGAGACTGGAAGCATGAGTGGTTGGATAACAA40.10660980810234541No Hit
AAGGACCTGAAGCTGAGCTATCTGGACGTCTATCTTATTCACTGGCCACA40.10660980810234541No Hit
CCTGTCCCCCACTCCACTGAGGAATACCAGGCCCGACCAGCCGGAAACTT40.10660980810234541No Hit
TCAACCTGCAACAGCAAACAATCCTCATCACGGGGAAAGCCGGCTCTGTT40.10660980810234541No Hit
CAGCCAGTCTCTCTGTTGGGGGTCCCTGAATTCCTGCAACAGCTCAGAAA40.10660980810234541No Hit
TCAATGCTATGCCCTGAGTCTTATCTCAGGGGTCAGTGATCAGGACACTT40.10660980810234541No Hit
ACTCTTTGCAGGTGTGGCCCACTTTCTTTGAGAGACCCCTTGTGAGGAAA40.10660980810234541No Hit
AAGGTGGCCATTGATGCAGAATATCGCCACATTGACTGTGCCTATTTCTA40.10660980810234541No Hit
GTGTGGCCCACTTTCTTTGAGAGACCCCTTGTGAGGAAAGCCTTTGAGAA40.10660980810234541No Hit
AAGCAGGGACAATGAGTATAATGTGGCCCTTCCTTTTCCCAGTATTACTA40.10660980810234541No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.2)