FastQCFastQC Report
Вс 18 дек 2016
clear1.fastq

Summary

[OK]Basic Statistics

MeasureValue
Filenameclear1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3650
Sequences flagged as poor quality0
Sequence length50-100
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGATTATCAAGAGAAAGACCCACCACTTGGAAGCCTCACCAAGGTCTATC50.136986301369863No Hit
TAGAGGCTGAGAAAGGGAGTCACTCAAACCTTGAATCCCTGTGGCCAGTG40.1095890410958904No Hit
ACGTAGAAAAGGCCGACAGAGTTCTTGCTGCCCACCCGATCCAGATACTT40.1095890410958904No Hit
GATCCAGATACTTCTGCCTGCCTTGAAGTGAAGGCCTCCCACCAAATGCG40.1095890410958904No Hit
GTGGTTGGATAACAAGAAAAATAAAAATATGGTACCTGGGCTGTGGTTTT40.1095890410958904No Hit
AACACGAGAAATGAAACATGAGACTGGAAGCATGAGTGGTTGGATAACAA40.1095890410958904No Hit
AAGGACCTGAAGCTGAGCTATCTGGACGTCTATCTTATTCACTGGCCACA40.1095890410958904No Hit
CCTGTCCCCCACTCCACTGAGGAATACCAGGCCCGACCAGCCGGAAACTT40.1095890410958904No Hit
CAGCCAGTCTCTCTGTTGGGGGTCCCTGAATTCCTGCAACAGCTCAGAAA40.1095890410958904No Hit
AAGGTGGCCATTGATGCAGAATATCGCCACATTGACTGTGCCTATTTCTA40.1095890410958904No Hit
GTGTGGCCCACTTTCTTTGAGAGACCCCTTGTGAGGAAAGCCTTTGAGAA40.1095890410958904No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.2)