FastQCFastQC Report
Сб 3 дек 2016
clear.fastq

Summary

[OK]Basic Statistics

MeasureValue
Filenameclear.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3313
Sequences flagged as poor quality0
Sequence length50-100
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AACACGAGAAATGAAACATGAGACTGGAAGCATGAGTGGTTGGATAACAA40.12073649260488982No Hit
TAGAGGCTGAGAAAGGGAGTCACTCAAACCTTGAATCCCTGTGGCCAGTG40.12073649260488982No Hit
AAGGACCTGAAGCTGAGCTATCTGGACGTCTATCTTATTCACTGGCCACA40.12073649260488982No Hit
CCTGTCCCCCACTCCACTGAGGAATACCAGGCCCGACCAGCCGGAAACTT40.12073649260488982No Hit
ACGTAGAAAAGGCCGACAGAGTTCTTGCTGCCCACCCGATCCAGATACTT40.12073649260488982No Hit
CAGCCAGTCTCTCTGTTGGGGGTCCCTGAATTCCTGCAACAGCTCAGAAA40.12073649260488982No Hit
GATCCAGATACTTCTGCCTGCCTTGAAGTGAAGGCCTCCCACCAAATGCG40.12073649260488982No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.2)