2026-01-12 13:37:08,398 Running on GPU
2026-01-12 13:37:08,401 Found 5 citations for tools or databases
2026-01-12 13:37:08,401 Query 1/1: test_e72a6 (length 90)
2026-01-12 13:37:10,678 Setting max_seq=512, max_extra_seq=2078
2026-01-12 13:37:45,043 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=81.8 pTM=0.507
2026-01-12 13:38:13,741 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=81.8 pTM=0.508 tol=4.31
2026-01-12 13:38:19,242 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=83 pTM=0.513 tol=0.457
2026-01-12 13:38:24,766 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=83.3 pTM=0.517 tol=1.09
2026-01-12 13:38:24,767 alphafold2_ptm_model_1_seed_000 took 67.1s (3 recycles)
2026-01-12 13:38:30,410 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=81.5 pTM=0.482
2026-01-12 13:38:35,964 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=81.6 pTM=0.49 tol=1.91
2026-01-12 13:38:41,532 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=81.9 pTM=0.49 tol=1.01
2026-01-12 13:38:47,121 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=81.8 pTM=0.495 tol=0.396
2026-01-12 13:38:47,122 alphafold2_ptm_model_2_seed_000 took 22.3s (3 recycles)
2026-01-12 13:38:52,813 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=80.2 pTM=0.494
2026-01-12 13:38:58,429 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=79.9 pTM=0.494 tol=3.68
2026-01-12 13:39:04,063 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=80.8 pTM=0.505 tol=2.38
2026-01-12 13:39:09,701 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=80.4 pTM=0.503 tol=0.551
2026-01-12 13:39:09,702 alphafold2_ptm_model_3_seed_000 took 22.5s (3 recycles)
2026-01-12 13:39:15,446 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=83.2 pTM=0.513
2026-01-12 13:39:21,116 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=81.6 pTM=0.505 tol=1.31
2026-01-12 13:39:26,797 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=82.6 pTM=0.514 tol=0.734
2026-01-12 13:39:32,490 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=83.1 pTM=0.521 tol=0.769
2026-01-12 13:39:32,491 alphafold2_ptm_model_4_seed_000 took 22.7s (3 recycles)
2026-01-12 13:39:38,285 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=83.6 pTM=0.518
2026-01-12 13:39:44,000 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=82.4 pTM=0.52 tol=1.85
2026-01-12 13:39:49,711 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=83 pTM=0.527 tol=1.26
2026-01-12 13:39:55,449 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=82.8 pTM=0.527 tol=0.589
2026-01-12 13:39:55,449 alphafold2_ptm_model_5_seed_000 took 22.9s (3 recycles)
2026-01-12 13:39:55,598 reranking models by 'plddt' metric
2026-01-12 13:39:55,599 rank_001_alphafold2_ptm_model_1_seed_000 pLDDT=83.3 pTM=0.517
2026-01-12 13:39:55,599 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=83.1 pTM=0.521
2026-01-12 13:39:55,599 rank_003_alphafold2_ptm_model_5_seed_000 pLDDT=82.8 pTM=0.527
2026-01-12 13:39:55,599 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=81.8 pTM=0.495
2026-01-12 13:39:55,600 rank_005_alphafold2_ptm_model_3_seed_000 pLDDT=80.4 pTM=0.503
2026-01-12 13:39:56,885 Done
